Query 044553
Match_columns 275
No_of_seqs 203 out of 2728
Neff 9.1
Searched_HMMs 46136
Date Fri Mar 29 04:23:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044553.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/044553hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF06888 Put_Phosphatase: Puta 100.0 2.8E-38 6.1E-43 262.4 24.4 226 5-235 2-234 (234)
2 KOG3120 Predicted haloacid deh 100.0 1.3E-37 2.8E-42 247.8 21.4 235 2-240 12-252 (256)
3 PRK09552 mtnX 2-hydroxy-3-keto 99.9 4.6E-26 1E-30 190.4 15.7 212 1-236 1-217 (219)
4 TIGR01489 DKMTPPase-SF 2,3-dik 99.9 1.3E-24 2.9E-29 177.0 20.1 184 4-199 2-188 (188)
5 COG4359 Uncharacterized conser 99.9 7.9E-25 1.7E-29 170.0 16.9 209 1-238 1-218 (220)
6 COG0546 Gph Predicted phosphat 99.9 7.2E-25 1.6E-29 183.3 13.5 199 1-232 2-218 (220)
7 TIGR03333 salvage_mtnX 2-hydro 99.9 3E-24 6.5E-29 178.9 17.1 207 6-236 2-213 (214)
8 TIGR03351 PhnX-like phosphonat 99.9 8.3E-24 1.8E-28 176.8 16.5 195 3-231 1-219 (220)
9 PRK13288 pyrophosphatase PpaX; 99.9 2.3E-24 5.1E-29 179.5 13.1 195 1-233 1-212 (214)
10 PRK13478 phosphonoacetaldehyde 99.9 2.6E-23 5.6E-28 178.9 18.7 207 1-238 1-261 (267)
11 TIGR01422 phosphonatase phosph 99.9 4.4E-23 9.5E-28 176.2 16.6 171 3-199 2-203 (253)
12 PLN02770 haloacid dehalogenase 99.9 1.9E-23 4.2E-28 177.8 14.3 194 2-228 21-232 (248)
13 PLN03243 haloacid dehalogenase 99.9 3.5E-23 7.6E-28 176.8 14.6 199 3-240 24-243 (260)
14 PLN02954 phosphoserine phospha 99.9 1.7E-22 3.6E-27 169.4 18.0 207 1-231 10-223 (224)
15 PRK13226 phosphoglycolate phos 99.9 4.3E-23 9.2E-28 173.7 13.5 196 2-231 11-224 (229)
16 PRK13225 phosphoglycolate phos 99.9 6.4E-23 1.4E-27 176.3 13.6 194 3-236 62-272 (273)
17 PRK09449 dUMP phosphatase; Pro 99.9 2.2E-22 4.8E-27 168.7 16.3 198 1-232 1-223 (224)
18 TIGR01454 AHBA_synth_RP 3-amin 99.9 6.1E-23 1.3E-27 169.8 12.7 190 6-232 1-204 (205)
19 PRK10826 2-deoxyglucose-6-phos 99.9 2.3E-22 5.1E-27 168.4 16.0 195 2-229 6-217 (222)
20 PRK11587 putative phosphatase; 99.9 2.7E-22 5.8E-27 167.6 15.4 169 1-197 1-182 (218)
21 PRK13582 thrH phosphoserine ph 99.9 1.5E-21 3.2E-26 161.4 19.2 200 3-236 1-200 (205)
22 TIGR01449 PGP_bact 2-phosphogl 99.9 1.2E-22 2.5E-27 168.9 12.1 192 6-230 1-212 (213)
23 PRK13222 phosphoglycolate phos 99.9 4.7E-22 1E-26 166.7 15.3 200 2-234 5-224 (226)
24 PLN02575 haloacid dehalogenase 99.9 1.2E-21 2.6E-26 173.5 14.8 197 3-235 131-345 (381)
25 TIGR00338 serB phosphoserine p 99.9 7.1E-21 1.5E-25 159.0 17.8 173 2-192 13-190 (219)
26 TIGR01428 HAD_type_II 2-haloal 99.9 2.1E-21 4.6E-26 159.7 14.0 112 63-200 84-195 (198)
27 PRK13223 phosphoglycolate phos 99.9 1.7E-21 3.8E-26 167.8 13.6 204 3-238 13-236 (272)
28 TIGR02253 CTE7 HAD superfamily 99.9 2.5E-21 5.5E-26 161.8 13.9 107 68-200 91-198 (221)
29 PRK14988 GMP/IMP nucleotidase; 99.9 5.3E-21 1.1E-25 160.3 13.8 107 67-199 89-195 (224)
30 TIGR01491 HAD-SF-IB-PSPlk HAD- 99.9 1.9E-20 4.1E-25 154.1 16.6 174 2-191 3-184 (201)
31 PRK10563 6-phosphogluconate ph 99.9 4.7E-21 1E-25 160.3 13.0 169 2-200 3-189 (221)
32 COG0637 Predicted phosphatase/ 99.9 7.8E-21 1.7E-25 158.8 14.1 172 3-202 2-190 (221)
33 TIGR02137 HSK-PSP phosphoserin 99.9 5.1E-20 1.1E-24 151.6 17.8 197 4-234 2-198 (203)
34 TIGR02009 PGMB-YQAB-SF beta-ph 99.8 1.5E-20 3.2E-25 152.8 13.6 163 3-194 1-183 (185)
35 PRK06698 bifunctional 5'-methy 99.8 1.1E-20 2.4E-25 174.3 14.2 193 2-234 240-456 (459)
36 TIGR01990 bPGM beta-phosphoglu 99.8 1.5E-20 3.4E-25 152.7 12.6 162 5-195 1-183 (185)
37 PLN02940 riboflavin kinase 99.8 1.2E-20 2.6E-25 169.6 12.9 169 3-198 11-195 (382)
38 PRK10725 fructose-1-P/6-phosph 99.8 2.9E-20 6.3E-25 151.6 14.0 165 3-196 5-185 (188)
39 TIGR02254 YjjG/YfnB HAD superf 99.8 5.2E-20 1.1E-24 154.0 15.1 128 69-231 95-224 (224)
40 TIGR02252 DREG-2 REG-2-like, H 99.8 4.1E-20 8.9E-25 152.6 12.5 164 4-194 1-202 (203)
41 PRK11133 serB phosphoserine ph 99.8 1.1E-18 2.3E-23 153.0 17.8 175 3-196 110-289 (322)
42 TIGR01488 HAD-SF-IB Haloacid D 99.8 2.4E-19 5.3E-24 144.6 11.9 167 5-187 1-175 (177)
43 TIGR01993 Pyr-5-nucltdase pyri 99.8 1.4E-19 3E-24 147.2 10.5 163 5-195 2-183 (184)
44 PRK10748 flavin mononucleotide 99.8 2.3E-19 4.9E-24 151.9 12.1 128 68-231 110-238 (238)
45 COG1011 Predicted hydrolase (H 99.8 1.3E-18 2.9E-23 146.0 14.2 130 70-233 98-228 (229)
46 PRK09456 ?-D-glucose-1-phospha 99.8 1.3E-18 2.9E-23 143.2 13.4 167 4-197 1-185 (199)
47 PLN02779 haloacid dehalogenase 99.8 5.4E-19 1.2E-23 153.3 11.5 126 70-229 143-270 (286)
48 PF13419 HAD_2: Haloacid dehal 99.8 6.6E-20 1.4E-24 146.8 5.3 164 6-195 1-175 (176)
49 TIGR01548 HAD-SF-IA-hyp1 haloa 99.8 8.1E-19 1.8E-23 144.3 11.8 90 72-188 107-196 (197)
50 TIGR02247 HAD-1A3-hyp Epoxide 99.8 1.2E-18 2.7E-23 144.6 11.2 104 69-198 92-197 (211)
51 PLN02919 haloacid dehalogenase 99.8 2.1E-18 4.6E-23 172.0 14.7 194 2-228 74-286 (1057)
52 COG0560 SerB Phosphoserine pho 99.8 3.9E-18 8.4E-23 141.2 13.6 176 2-196 4-185 (212)
53 TIGR01509 HAD-SF-IA-v3 haloaci 99.8 9.8E-19 2.1E-23 141.6 9.4 99 70-195 84-182 (183)
54 TIGR01549 HAD-SF-IA-v1 haloaci 99.8 1.7E-18 3.8E-23 136.6 10.4 149 5-190 1-154 (154)
55 KOG1615 Phosphoserine phosphat 99.7 4.7E-17 1E-21 128.0 13.3 166 3-186 16-189 (227)
56 TIGR01672 AphA HAD superfamily 99.7 1.3E-17 2.7E-22 139.8 10.5 145 4-199 64-213 (237)
57 PHA02597 30.2 hypothetical pro 99.7 8.1E-18 1.8E-22 138.3 8.6 181 3-229 2-196 (197)
58 PRK08942 D,D-heptose 1,7-bisph 99.7 1.7E-17 3.6E-22 134.7 10.2 138 68-233 26-178 (181)
59 TIGR01493 HAD-SF-IA-v2 Haloaci 99.7 1.2E-17 2.5E-22 134.7 8.1 93 63-188 82-174 (175)
60 TIGR00213 GmhB_yaeD D,D-heptos 99.7 2E-17 4.4E-22 133.6 9.3 133 68-228 23-175 (176)
61 TIGR01490 HAD-SF-IB-hyp1 HAD-s 99.7 1.1E-16 2.5E-21 131.9 13.8 171 5-191 1-192 (202)
62 PLN02811 hydrolase 99.7 2E-16 4.4E-21 132.3 13.7 164 10-199 1-186 (220)
63 TIGR01685 MDP-1 magnesium-depe 99.7 1.6E-17 3.4E-22 132.8 5.6 108 68-202 42-161 (174)
64 TIGR01544 HAD-SF-IE haloacid d 99.7 8.1E-16 1.8E-20 130.9 15.6 126 53-189 101-230 (277)
65 TIGR01656 Histidinol-ppas hist 99.7 2.4E-17 5.2E-22 129.2 5.1 107 69-198 25-146 (147)
66 TIGR01662 HAD-SF-IIIA HAD-supe 99.7 8.1E-16 1.8E-20 118.3 10.2 99 69-197 23-131 (132)
67 TIGR01261 hisB_Nterm histidino 99.7 1.4E-16 3.1E-21 126.3 5.9 108 68-199 26-149 (161)
68 PRK06769 hypothetical protein; 99.7 3.3E-16 7.2E-21 126.0 8.1 135 69-231 26-171 (173)
69 PRK11590 hypothetical protein; 99.6 1.2E-15 2.5E-20 126.9 11.1 168 3-191 6-197 (211)
70 TIGR01664 DNA-3'-Pase DNA 3'-p 99.6 9.3E-16 2E-20 122.4 9.7 93 72-192 43-157 (166)
71 cd01427 HAD_like Haloacid deha 99.6 1.5E-15 3.4E-20 116.1 7.6 117 68-194 21-137 (139)
72 TIGR01545 YfhB_g-proteo haloac 99.6 3.6E-14 7.8E-19 117.6 12.4 103 70-191 93-196 (210)
73 KOG3085 Predicted hydrolase (H 99.6 4.6E-14 9.9E-19 117.0 12.0 171 2-199 6-215 (237)
74 KOG2914 Predicted haloacid-hal 99.5 8.6E-14 1.9E-18 114.9 12.5 173 3-199 10-198 (222)
75 TIGR01691 enolase-ppase 2,3-di 99.5 3E-14 6.5E-19 118.5 9.6 105 69-201 93-200 (220)
76 PRK05446 imidazole glycerol-ph 99.5 3.1E-14 6.8E-19 125.7 9.9 111 68-201 27-152 (354)
77 TIGR01681 HAD-SF-IIIC HAD-supe 99.5 2.3E-14 4.9E-19 109.6 7.8 85 71-185 29-123 (128)
78 KOG3109 Haloacid dehalogenase- 99.5 2.2E-13 4.7E-18 109.6 12.6 176 3-199 15-207 (244)
79 PRK11009 aphA acid phosphatase 99.5 5.3E-14 1.1E-18 117.9 9.4 96 69-199 112-213 (237)
80 TIGR01668 YqeG_hyp_ppase HAD s 99.5 1.6E-13 3.5E-18 110.1 8.3 95 70-199 42-138 (170)
81 PRK08238 hypothetical protein; 99.4 1.4E-12 3E-17 120.2 13.8 148 3-191 10-160 (479)
82 PF12710 HAD: haloacid dehalog 99.4 1.6E-13 3.4E-18 111.9 6.5 96 74-186 92-191 (192)
83 TIGR01670 YrbI-phosphatas 3-de 99.4 1.7E-13 3.6E-18 108.2 4.9 83 79-197 36-118 (154)
84 COG0241 HisB Histidinol phosph 99.4 2.1E-12 4.6E-17 103.0 10.1 109 68-199 28-151 (181)
85 PHA02530 pseT polynucleotide k 99.4 1.1E-12 2.4E-17 114.7 8.2 107 69-196 185-295 (300)
86 smart00577 CPDc catalytic doma 99.4 3.8E-13 8.3E-18 105.5 3.9 90 69-188 43-133 (148)
87 COG2179 Predicted hydrolase of 99.3 9.1E-12 2E-16 96.4 9.3 93 70-197 45-138 (175)
88 TIGR01663 PNK-3'Pase polynucle 99.3 3.6E-12 7.8E-17 118.0 8.0 93 72-191 198-305 (526)
89 PRK09484 3-deoxy-D-manno-octul 99.3 2.3E-12 4.9E-17 104.7 5.7 80 78-192 55-134 (183)
90 PF00702 Hydrolase: haloacid d 99.3 3.1E-13 6.7E-18 112.0 0.5 90 70-190 126-215 (215)
91 TIGR02726 phenyl_P_delta pheny 99.3 3.9E-12 8.5E-17 101.5 6.1 78 79-191 42-119 (169)
92 TIGR01684 viral_ppase viral ph 99.3 3.1E-11 6.7E-16 102.8 10.1 108 70-183 144-264 (301)
93 TIGR01686 FkbH FkbH-like domai 99.2 1.8E-11 4E-16 107.9 6.2 88 71-189 31-122 (320)
94 TIGR01458 HAD-SF-IIA-hyp3 HAD- 99.2 1.2E-11 2.5E-16 105.9 4.6 133 72-231 121-254 (257)
95 TIGR01459 HAD-SF-IIA-hyp4 HAD- 99.2 1.1E-10 2.5E-15 98.9 9.4 85 71-186 24-111 (242)
96 PLN02645 phosphoglycolate phos 99.1 9E-10 2E-14 96.8 13.3 77 152-232 230-308 (311)
97 TIGR01452 PGP_euk phosphoglyco 99.1 3.9E-11 8.6E-16 103.9 4.6 105 72-201 144-250 (279)
98 PRK01158 phosphoglycolate phos 99.1 2.6E-10 5.7E-15 95.8 9.2 42 149-191 153-194 (230)
99 TIGR01533 lipo_e_P4 5'-nucleot 99.1 8.7E-10 1.9E-14 94.0 12.2 85 68-185 115-203 (266)
100 PHA03398 viral phosphatase sup 99.1 5.7E-10 1.2E-14 95.2 10.5 114 70-183 146-266 (303)
101 COG0647 NagD Predicted sugar p 99.0 1.2E-09 2.6E-14 93.0 9.7 77 152-233 190-267 (269)
102 TIGR01457 HAD-SF-IIA-hyp2 HAD- 99.0 2.3E-09 4.9E-14 91.3 10.3 51 150-201 176-227 (249)
103 PF12689 Acid_PPase: Acid Phos 99.0 3.2E-10 7E-15 90.0 4.4 105 68-193 42-147 (169)
104 PRK10444 UMP phosphatase; Prov 99.0 8E-09 1.7E-13 87.8 13.1 72 151-227 173-245 (248)
105 COG0561 Cof Predicted hydrolas 99.0 1.2E-08 2.7E-13 87.5 14.1 78 148-235 184-261 (264)
106 TIGR01487 SPP-like sucrose-pho 99.0 2.3E-09 5.1E-14 89.2 8.7 116 73-191 20-184 (215)
107 PRK10530 pyridoxal phosphate ( 98.9 1E-08 2.3E-13 88.2 11.3 93 73-191 139-236 (272)
108 COG4996 Predicted phosphatase 98.9 5.1E-09 1.1E-13 77.6 7.2 85 68-181 38-127 (164)
109 TIGR01482 SPP-subfamily Sucros 98.9 7.6E-09 1.6E-13 86.5 9.0 43 148-191 144-186 (225)
110 TIGR02244 HAD-IG-Ncltidse HAD 98.9 2.2E-08 4.8E-13 88.2 11.0 122 70-198 183-324 (343)
111 PF09419 PGP_phosphatase: Mito 98.8 2.5E-08 5.4E-13 79.0 9.7 97 70-197 58-164 (168)
112 TIGR01525 ATPase-IB_hvy heavy 98.8 1.5E-08 3.3E-13 96.0 9.7 117 70-232 383-500 (556)
113 TIGR02251 HIF-SF_euk Dullard-l 98.8 1.5E-08 3.2E-13 80.6 7.7 89 70-188 41-130 (162)
114 TIGR01512 ATPase-IB2_Cd heavy 98.8 1.8E-08 3.9E-13 95.0 9.4 118 70-232 361-479 (536)
115 PF08645 PNK3P: Polynucleotide 98.8 6.7E-09 1.5E-13 82.2 4.1 84 72-182 30-130 (159)
116 COG1778 Low specificity phosph 98.7 5.2E-09 1.1E-13 80.2 2.9 78 79-191 43-120 (170)
117 PF08282 Hydrolase_3: haloacid 98.7 4.1E-08 8.8E-13 82.9 7.1 47 149-199 182-228 (254)
118 PLN02177 glycerol-3-phosphate 98.7 4E-07 8.7E-12 84.4 14.1 165 3-190 22-208 (497)
119 PRK10187 trehalose-6-phosphate 98.7 6.1E-07 1.3E-11 77.2 14.1 77 149-238 170-247 (266)
120 TIGR01484 HAD-SF-IIB HAD-super 98.7 8.2E-08 1.8E-12 79.1 8.1 43 148-191 158-200 (204)
121 PF13344 Hydrolase_6: Haloacid 98.7 1.5E-07 3.3E-12 68.7 8.5 48 72-119 15-65 (101)
122 TIGR01511 ATPase-IB1_Cu copper 98.6 2.4E-07 5.1E-12 87.9 11.5 83 70-190 404-486 (562)
123 TIGR01675 plant-AP plant acid 98.6 5.1E-07 1.1E-11 75.1 11.7 131 3-186 77-212 (229)
124 smart00775 LNS2 LNS2 domain. T 98.6 2.3E-07 4.9E-12 73.4 8.8 103 72-191 28-140 (157)
125 TIGR01459 HAD-SF-IIA-hyp4 HAD- 98.6 6.3E-09 1.4E-13 88.2 -0.2 98 73-196 140-240 (242)
126 TIGR01486 HAD-SF-IIB-MPGP mann 98.6 4.8E-07 1E-11 77.3 10.8 50 148-200 171-221 (256)
127 PRK10671 copA copper exporting 98.5 3.2E-07 6.9E-12 91.0 9.2 117 70-232 649-765 (834)
128 TIGR01485 SPP_plant-cyano sucr 98.5 7.3E-07 1.6E-11 75.9 9.7 49 148-197 162-210 (249)
129 TIGR01522 ATPase-IIA2_Ca golgi 98.5 1.1E-06 2.3E-11 87.7 10.9 134 71-232 528-671 (884)
130 PF05822 UMPH-1: Pyrimidine 5' 98.4 1.8E-06 3.8E-11 72.3 10.1 121 56-189 73-198 (246)
131 PRK00192 mannosyl-3-phosphogly 98.4 6.8E-07 1.5E-11 77.2 7.7 63 1-114 2-64 (273)
132 PRK10513 sugar phosphate phosp 98.4 8.5E-07 1.9E-11 76.3 8.0 61 1-112 1-61 (270)
133 PTZ00445 p36-lilke protein; Pr 98.4 1.1E-06 2.4E-11 71.4 7.2 110 72-197 76-205 (219)
134 COG4229 Predicted enolase-phos 98.4 4.4E-06 9.6E-11 65.8 10.0 104 70-201 102-208 (229)
135 TIGR02250 FCP1_euk FCP1-like p 98.3 1.6E-06 3.5E-11 68.4 6.9 53 69-122 56-110 (156)
136 PF03767 Acid_phosphat_B: HAD 98.3 2.2E-06 4.9E-11 71.9 8.1 91 70-185 114-207 (229)
137 COG4087 Soluble P-type ATPase 98.3 3.2E-06 6.9E-11 63.0 7.8 85 69-189 28-112 (152)
138 PRK15126 thiamin pyrimidine py 98.3 7.7E-06 1.7E-10 70.5 11.0 41 73-113 21-61 (272)
139 PRK12702 mannosyl-3-phosphogly 98.3 7.4E-06 1.6E-10 70.3 9.6 46 74-121 21-66 (302)
140 COG2217 ZntA Cation transport 98.2 7.6E-06 1.6E-10 78.8 10.5 90 70-199 536-625 (713)
141 PRK14010 potassium-transportin 98.2 5.4E-06 1.2E-10 79.6 9.3 149 70-270 440-595 (673)
142 PRK01122 potassium-transportin 98.2 7.9E-06 1.7E-10 78.5 9.9 151 70-270 444-599 (679)
143 PRK10976 putative hydrolase; P 98.2 5.5E-06 1.2E-10 71.1 7.9 41 73-113 21-61 (266)
144 PRK11033 zntA zinc/cadmium/mer 98.2 8E-06 1.7E-10 79.9 9.6 114 70-232 567-681 (741)
145 TIGR01497 kdpB K+-transporting 98.2 1.2E-05 2.6E-10 77.2 10.5 151 70-270 445-600 (675)
146 PF08235 LNS2: LNS2 (Lipin/Ned 98.2 9.9E-06 2.1E-10 63.3 8.2 105 71-191 27-140 (157)
147 TIGR01680 Veg_Stor_Prot vegeta 98.1 3.1E-05 6.7E-10 65.7 11.2 50 68-118 142-194 (275)
148 TIGR01689 EcbF-BcbF capsule bi 98.1 1.1E-05 2.3E-10 61.1 7.5 46 71-118 24-84 (126)
149 PRK14501 putative bifunctional 98.1 3.2E-05 6.8E-10 75.8 12.4 73 148-235 652-724 (726)
150 COG2503 Predicted secreted aci 98.1 4.6E-05 9.9E-10 62.9 10.2 122 3-184 79-207 (274)
151 PTZ00174 phosphomannomutase; P 98.1 1.5E-05 3.3E-10 67.8 7.8 56 1-107 3-58 (247)
152 PLN02580 trehalose-phosphatase 98.0 0.00011 2.3E-09 66.0 12.8 78 150-237 298-379 (384)
153 TIGR01116 ATPase-IIA1_Ca sarco 98.0 4.4E-05 9.5E-10 76.6 11.4 142 70-231 536-682 (917)
154 TIGR02463 MPGP_rel mannosyl-3- 98.0 1.9E-05 4.2E-10 65.8 7.3 36 76-111 21-56 (221)
155 KOG0207 Cation transport ATPas 98.0 5.7E-05 1.2E-09 73.0 11.0 117 70-232 722-838 (951)
156 PF11019 DUF2608: Protein of u 98.0 5.4E-05 1.2E-09 64.4 9.9 106 70-183 80-191 (252)
157 TIGR01524 ATPase-IIIB_Mg magne 98.0 6.2E-05 1.3E-09 75.0 11.7 138 71-232 515-655 (867)
158 TIGR02461 osmo_MPG_phos mannos 98.0 2.6E-05 5.7E-10 65.4 7.8 47 74-122 18-64 (225)
159 PLN02887 hydrolase family prot 98.0 2.4E-05 5.1E-10 74.0 8.1 39 73-111 327-365 (580)
160 PRK10517 magnesium-transportin 98.0 5.3E-05 1.1E-09 75.7 10.8 139 70-232 549-690 (902)
161 COG3700 AphA Acid phosphatase 98.0 9.1E-05 2E-09 58.3 9.8 97 72-201 115-215 (237)
162 KOG3128 Uncharacterized conser 98.0 2E-05 4.4E-10 65.3 6.3 121 56-188 121-246 (298)
163 PRK15122 magnesium-transportin 97.9 4.5E-05 9.8E-10 76.2 9.9 138 71-232 550-690 (903)
164 PRK03669 mannosyl-3-phosphogly 97.9 3.8E-05 8.3E-10 66.2 8.2 38 74-111 27-64 (271)
165 TIGR01647 ATPase-IIIA_H plasma 97.9 6.6E-05 1.4E-09 73.7 10.8 137 71-232 442-587 (755)
166 COG4030 Uncharacterized protei 97.9 0.00016 3.6E-09 59.2 11.2 105 6-111 3-122 (315)
167 PF13242 Hydrolase_like: HAD-h 97.9 5.2E-06 1.1E-10 57.0 2.2 69 154-227 6-75 (75)
168 KOG0202 Ca2+ transporting ATPa 97.9 0.00014 3E-09 69.8 11.8 140 70-232 583-731 (972)
169 TIGR00099 Cof-subfamily Cof su 97.9 3.8E-05 8.3E-10 65.5 7.6 40 73-112 18-57 (256)
170 TIGR01517 ATPase-IIB_Ca plasma 97.9 9.7E-05 2.1E-09 74.4 11.5 139 71-231 579-721 (941)
171 PF05152 DUF705: Protein of un 97.9 7.4E-05 1.6E-09 63.3 8.1 51 73-123 144-194 (297)
172 KOG2882 p-Nitrophenyl phosphat 97.8 0.00024 5.3E-09 60.7 10.9 56 152-208 224-280 (306)
173 PF05116 S6PP: Sucrose-6F-phos 97.8 3.5E-05 7.6E-10 65.5 5.8 38 148-186 160-197 (247)
174 PF06941 NT5C: 5' nucleotidase 97.8 7.3E-05 1.6E-09 61.0 7.1 88 4-98 2-100 (191)
175 COG0474 MgtA Cation transport 97.8 0.00019 4.1E-09 71.9 11.3 143 70-232 546-692 (917)
176 PRK14502 bifunctional mannosyl 97.7 0.00012 2.6E-09 69.7 8.2 38 75-112 437-474 (694)
177 TIGR01523 ATPase-IID_K-Na pota 97.7 0.00027 5.8E-09 71.7 11.2 140 70-231 645-798 (1053)
178 PF03031 NIF: NLI interacting 97.7 7.5E-05 1.6E-09 59.0 5.7 52 70-122 35-87 (159)
179 PLN02382 probable sucrose-phos 97.7 0.00024 5.2E-09 64.9 9.4 49 147-196 169-220 (413)
180 COG3769 Predicted hydrolase (H 97.7 0.0011 2.4E-08 54.2 11.8 36 76-111 28-63 (274)
181 PLN02499 glycerol-3-phosphate 97.6 0.0016 3.4E-08 60.0 13.1 51 79-134 101-152 (498)
182 TIGR01460 HAD-SF-IIA Haloacid 97.5 0.00022 4.7E-09 60.2 6.6 49 72-120 15-67 (236)
183 TIGR01106 ATPase-IIC_X-K sodiu 97.5 0.00089 1.9E-08 67.9 11.7 41 71-111 568-608 (997)
184 TIGR01456 CECR5 HAD-superfamil 97.5 0.00015 3.2E-09 64.2 5.1 57 170-231 263-320 (321)
185 KOG3040 Predicted sugar phosph 97.5 0.0031 6.8E-08 51.1 12.0 75 154-233 183-258 (262)
186 PF05761 5_nucleotid: 5' nucle 97.4 0.00021 4.6E-09 65.5 5.0 126 70-198 182-325 (448)
187 TIGR02463 MPGP_rel mannosyl-3- 97.1 0.00098 2.1E-08 55.5 5.8 40 150-190 176-215 (221)
188 TIGR01657 P-ATPase-V P-type AT 97.1 0.0014 2.9E-08 67.0 7.8 42 70-111 655-696 (1054)
189 PRK00192 mannosyl-3-phosphogly 97.0 0.0022 4.8E-08 55.3 6.9 38 153-191 190-228 (273)
190 PLN02423 phosphomannomutase 96.9 0.0036 7.9E-08 53.1 7.3 34 73-107 26-59 (245)
191 TIGR02471 sucr_syn_bact_C sucr 96.9 0.0013 2.9E-08 55.3 4.6 41 148-189 154-194 (236)
192 TIGR02245 HAD_IIID1 HAD-superf 96.8 0.0028 6E-08 51.7 5.4 41 70-111 44-84 (195)
193 TIGR01494 ATPase_P-type ATPase 96.7 0.0044 9.6E-08 58.2 7.1 79 70-188 346-424 (499)
194 PLN03017 trehalose-phosphatase 96.6 0.0047 1E-07 55.1 6.0 77 151-237 281-361 (366)
195 PLN02151 trehalose-phosphatase 96.5 0.0046 9.9E-08 55.0 5.6 76 151-236 267-346 (354)
196 KOG2961 Predicted hydrolase (H 96.4 0.042 9.2E-07 42.4 9.0 45 154-198 123-168 (190)
197 COG2216 KdpB High-affinity K+ 96.3 0.0098 2.1E-07 54.6 6.4 149 71-270 447-601 (681)
198 TIGR01452 PGP_euk phosphoglyco 96.3 0.028 6.1E-07 48.6 9.1 48 72-119 19-69 (279)
199 TIGR01652 ATPase-Plipid phosph 96.3 0.016 3.5E-07 59.3 8.7 42 70-111 630-671 (1057)
200 TIGR01456 CECR5 HAD-superfamil 96.3 0.0057 1.2E-07 54.1 4.8 15 5-19 2-16 (321)
201 PLN02205 alpha,alpha-trehalose 96.2 0.011 2.3E-07 58.9 6.3 75 149-236 758-846 (854)
202 COG1877 OtsB Trehalose-6-phosp 96.1 0.021 4.6E-07 48.8 7.2 42 69-110 38-80 (266)
203 TIGR00685 T6PP trehalose-phosp 96.1 0.0091 2E-07 50.6 5.0 71 152-235 166-243 (244)
204 KOG2116 Protein involved in pl 96.0 0.041 8.9E-07 51.9 8.8 133 3-191 530-671 (738)
205 TIGR00685 T6PP trehalose-phosp 96.0 0.01 2.2E-07 50.3 4.5 32 70-101 24-56 (244)
206 PRK03669 mannosyl-3-phosphogly 96.0 0.015 3.2E-07 50.1 5.5 48 148-199 182-232 (271)
207 PLN03190 aminophospholipid tra 95.9 0.028 6E-07 58.0 8.0 41 70-110 725-765 (1178)
208 KOG2470 Similar to IMP-GMP spe 95.9 0.013 2.8E-07 51.3 4.7 120 72-195 241-373 (510)
209 PRK10513 sugar phosphate phosp 95.8 0.0056 1.2E-07 52.5 2.4 43 148-191 191-233 (270)
210 KOG0204 Calcium transporting A 95.8 0.12 2.5E-06 50.5 11.2 141 70-232 646-792 (1034)
211 PRK10976 putative hydrolase; P 95.7 0.0057 1.2E-07 52.4 2.0 50 146-197 183-232 (266)
212 TIGR02471 sucr_syn_bact_C sucr 95.7 0.0077 1.7E-07 50.7 2.7 33 78-111 22-54 (236)
213 TIGR01458 HAD-SF-IIA-hyp3 HAD- 95.5 0.019 4.1E-07 49.1 4.4 49 72-120 22-73 (257)
214 PRK15126 thiamin pyrimidine py 95.4 0.0068 1.5E-07 52.1 1.4 45 146-191 181-225 (272)
215 COG4850 Uncharacterized conser 95.4 0.21 4.6E-06 43.5 10.1 32 69-100 194-226 (373)
216 COG4502 5'(3')-deoxyribonucleo 95.3 0.15 3.3E-06 38.9 8.1 30 66-96 63-92 (180)
217 TIGR00099 Cof-subfamily Cof su 95.0 0.012 2.6E-07 50.0 1.8 45 146-191 181-225 (256)
218 TIGR01460 HAD-SF-IIA Haloacid 95.0 0.019 4E-07 48.5 2.8 45 151-196 187-233 (236)
219 PLN03063 alpha,alpha-trehalose 94.8 0.058 1.2E-06 53.6 5.9 40 70-109 531-571 (797)
220 PLN03064 alpha,alpha-trehalose 94.5 0.076 1.7E-06 53.2 6.1 40 70-109 621-661 (934)
221 PLN02887 hydrolase family prot 94.4 0.023 5E-07 54.1 2.2 46 145-191 499-544 (580)
222 KOG2630 Enolase-phosphatase E- 94.4 0.14 3E-06 42.4 6.2 100 70-201 122-228 (254)
223 COG3882 FkbH Predicted enzyme 94.2 0.23 5E-06 45.6 7.8 85 72-183 256-340 (574)
224 KOG3189 Phosphomannomutase [Li 94.1 0.18 3.8E-06 40.9 6.2 44 72-119 29-74 (252)
225 KOG1618 Predicted phosphatase 94.1 0.26 5.6E-06 42.9 7.6 28 71-98 51-82 (389)
226 PF02358 Trehalose_PPase: Treh 94.0 0.057 1.2E-06 45.4 3.6 36 69-104 17-53 (235)
227 PRK10530 pyridoxal phosphate ( 93.7 0.61 1.3E-05 39.8 9.5 70 1-123 1-70 (272)
228 TIGR02461 osmo_MPG_phos mannos 93.2 0.066 1.4E-06 44.8 2.6 41 151-191 179-220 (225)
229 PTZ00174 phosphomannomutase; P 92.7 0.13 2.8E-06 43.6 3.7 44 149-197 184-231 (247)
230 PLN02423 phosphomannomutase 92.6 0.24 5.1E-06 42.0 5.1 34 148-187 184-221 (245)
231 KOG0206 P-type ATPase [General 89.9 2.3 5E-05 43.7 9.6 41 70-110 650-690 (1151)
232 PRK12702 mannosyl-3-phosphogly 89.5 0.42 9.1E-06 41.5 3.7 44 151-197 206-250 (302)
233 KOG0209 P-type ATPase [Inorgan 88.6 1.5 3.2E-05 43.2 6.8 42 70-111 674-715 (1160)
234 PF06189 5-nucleotidase: 5'-nu 88.0 0.84 1.8E-05 38.7 4.4 15 5-19 123-137 (264)
235 TIGR01658 EYA-cons_domain eyes 87.7 1.3 2.9E-05 37.2 5.3 39 153-192 214-252 (274)
236 KOG0323 TFIIF-interacting CTD 87.5 2.4 5.1E-05 40.8 7.5 52 70-122 200-253 (635)
237 COG5083 SMP2 Uncharacterized p 87.0 0.46 1E-05 43.1 2.4 39 152-191 477-515 (580)
238 KOG2134 Polynucleotide kinase 85.7 0.43 9.2E-06 42.6 1.5 27 70-96 103-129 (422)
239 KOG1605 TFIIF-interacting CTD 85.3 0.19 4.2E-06 42.8 -0.8 48 70-118 130-178 (262)
240 PRK14502 bifunctional mannosyl 85.1 0.71 1.5E-05 44.7 2.8 40 151-191 611-652 (694)
241 COG0731 Fe-S oxidoreductases [ 84.2 1.9 4.1E-05 37.5 4.8 38 69-109 90-128 (296)
242 COG5663 Uncharacterized conser 84.1 2.8 6E-05 33.2 5.1 38 68-106 69-106 (194)
243 KOG4549 Magnesium-dependent ph 83.2 2.6 5.6E-05 31.7 4.4 44 68-111 41-85 (144)
244 TIGR02468 sucrsPsyn_pln sucros 82.4 4.1 8.9E-05 41.7 6.9 64 98-184 923-988 (1050)
245 PLN02205 alpha,alpha-trehalose 81.1 3.1 6.7E-05 41.9 5.6 37 71-107 616-653 (854)
246 KOG2882 p-Nitrophenyl phosphat 81.1 2.8 6.2E-05 36.3 4.6 42 70-111 37-81 (306)
247 COG5610 Predicted hydrolase (H 80.6 10 0.00022 35.0 8.0 98 70-193 96-198 (635)
248 KOG0210 P-type ATPase [Inorgan 79.5 8.1 0.00018 37.6 7.4 96 70-197 710-807 (1051)
249 PRK13762 tRNA-modifying enzyme 73.7 5.9 0.00013 35.1 4.7 37 69-108 140-176 (322)
250 KOG0205 Plasma membrane H+-tra 73.5 9.1 0.0002 37.0 6.0 108 71-188 492-602 (942)
251 KOG2469 IMP-GMP specific 5'-nu 73.1 12 0.00027 33.9 6.4 121 72-198 199-334 (424)
252 PLN03017 trehalose-phosphatase 71.5 17 0.00038 32.7 7.1 33 71-104 133-165 (366)
253 PLN02151 trehalose-phosphatase 69.2 15 0.00032 33.0 6.1 34 71-105 120-153 (354)
254 PLN02588 glycerol-3-phosphate 66.9 26 0.00057 33.0 7.4 49 78-132 137-186 (525)
255 PF09949 DUF2183: Uncharacteri 60.1 62 0.0013 23.3 7.4 29 153-184 50-79 (100)
256 TIGR02495 NrdG2 anaerobic ribo 57.7 23 0.00049 28.4 4.9 31 69-99 72-102 (191)
257 TIGR03365 Bsubt_queE 7-cyano-7 57.3 9.7 0.00021 32.1 2.7 30 70-99 83-112 (238)
258 PRK12288 GTPase RsgA; Reviewed 55.7 1.5E+02 0.0033 26.5 10.3 31 78-108 173-203 (347)
259 PRK13717 conjugal transfer pro 55.7 33 0.00071 25.8 4.8 19 77-95 85-103 (128)
260 PF02593 dTMP_synthase: Thymid 55.6 32 0.00069 28.6 5.4 52 70-121 58-115 (217)
261 smart00540 LEM in nuclear memb 55.5 14 0.0003 22.3 2.4 32 77-108 9-40 (44)
262 PRK10076 pyruvate formate lyas 53.9 26 0.00057 29.0 4.7 37 70-106 49-88 (213)
263 TIGR02109 PQQ_syn_pqqE coenzym 53.4 29 0.00062 31.0 5.3 42 69-111 63-107 (358)
264 PRK05301 pyrroloquinoline quin 53.0 28 0.0006 31.4 5.1 42 69-111 72-116 (378)
265 PF06437 ISN1: IMP-specific 5' 51.2 39 0.00084 30.6 5.4 23 74-96 169-191 (408)
266 KOG3107 Predicted haloacid deh 50.5 53 0.0011 29.7 6.1 37 153-191 409-445 (468)
267 PF03332 PMM: Eukaryotic phosp 48.8 17 0.00038 30.1 2.8 43 76-119 1-43 (220)
268 COG1162 Predicted GTPases [Gen 47.6 1.4E+02 0.0031 26.1 8.3 31 78-108 132-162 (301)
269 PF05988 DUF899: Bacterial pro 47.3 70 0.0015 26.4 6.0 49 74-124 93-141 (211)
270 PRK12289 GTPase RsgA; Reviewed 46.4 2.2E+02 0.0048 25.6 9.8 16 149-164 180-195 (352)
271 PF02358 Trehalose_PPase: Treh 45.1 11 0.00023 31.6 1.1 37 152-188 164-202 (235)
272 TIGR02826 RNR_activ_nrdG3 anae 44.5 43 0.00092 25.9 4.3 26 73-98 74-99 (147)
273 TIGR03470 HpnH hopanoid biosyn 44.1 25 0.00054 31.0 3.3 30 69-98 82-111 (318)
274 PF13911 AhpC-TSA_2: AhpC/TSA 43.0 72 0.0016 23.0 5.2 39 78-119 4-42 (115)
275 TIGR03278 methan_mark_10 putat 42.4 44 0.00096 30.6 4.7 43 70-112 85-131 (404)
276 cd05014 SIS_Kpsf KpsF-like pro 41.7 24 0.00052 26.0 2.5 28 72-99 59-86 (128)
277 TIGR02744 TrbI_Ftype type-F co 40.5 1.5E+02 0.0032 21.9 6.6 18 78-95 73-90 (112)
278 cd05008 SIS_GlmS_GlmD_1 SIS (S 40.3 32 0.00068 25.2 2.9 29 73-101 59-87 (126)
279 TIGR02494 PFLE_PFLC glycyl-rad 40.2 40 0.00088 29.1 4.0 29 70-98 136-165 (295)
280 TIGR00157 ribosome small subun 40.0 2.3E+02 0.0049 23.9 9.7 31 78-108 88-118 (245)
281 TIGR02493 PFLA pyruvate format 39.8 54 0.0012 27.1 4.6 39 69-107 75-118 (235)
282 PRK11145 pflA pyruvate formate 39.4 46 0.001 27.8 4.1 29 70-98 81-110 (246)
283 TIGR02886 spore_II_AA anti-sig 39.0 61 0.0013 22.9 4.2 35 78-114 62-96 (106)
284 PF04123 DUF373: Domain of unk 38.9 2.9E+02 0.0063 24.8 9.7 23 158-183 90-112 (344)
285 PF00875 DNA_photolyase: DNA p 38.8 27 0.00058 27.3 2.4 45 74-122 53-97 (165)
286 cd02071 MM_CoA_mut_B12_BD meth 37.5 56 0.0012 24.1 3.9 41 73-113 64-106 (122)
287 cd05017 SIS_PGI_PMI_1 The memb 36.9 66 0.0014 23.5 4.2 36 72-109 55-90 (119)
288 PF01976 DUF116: Protein of un 36.4 78 0.0017 24.9 4.6 35 75-111 74-108 (158)
289 PF08444 Gly_acyl_tr_C: Aralky 36.0 75 0.0016 22.4 4.0 35 77-111 42-76 (89)
290 KOG2832 TFIIF-interacting CTD 35.5 1E+02 0.0022 27.8 5.6 45 70-115 213-257 (393)
291 PF00578 AhpC-TSA: AhpC/TSA fa 35.1 58 0.0012 23.5 3.6 37 75-111 47-83 (124)
292 TIGR02244 HAD-IG-Ncltidse HAD 34.9 39 0.00085 30.2 3.0 30 3-32 12-52 (343)
293 COG1180 PflA Pyruvate-formate 34.0 53 0.0012 28.1 3.7 25 73-97 98-122 (260)
294 cd05710 SIS_1 A subgroup of th 33.8 45 0.00097 24.5 2.8 28 72-99 59-86 (120)
295 PF14336 DUF4392: Domain of un 33.7 3E+02 0.0066 23.9 8.3 38 73-110 62-100 (291)
296 KOG0203 Na+/K+ ATPase, alpha s 31.3 38 0.00083 33.9 2.5 40 71-110 590-629 (1019)
297 TIGR02765 crypto_DASH cryptoch 31.1 70 0.0015 29.4 4.2 38 74-111 61-98 (429)
298 TIGR03127 RuMP_HxlB 6-phospho 30.9 50 0.0011 26.1 2.8 30 72-101 84-113 (179)
299 PF04312 DUF460: Protein of un 30.7 1.5E+02 0.0032 22.8 5.1 35 76-110 65-101 (138)
300 smart00497 IENR1 Intron encode 29.7 77 0.0017 19.1 3.0 28 3-30 2-30 (53)
301 PF01380 SIS: SIS domain SIS d 29.4 60 0.0013 23.7 2.9 30 72-101 65-94 (131)
302 PF00072 Response_reg: Respons 29.2 93 0.002 21.6 3.9 39 74-112 56-96 (112)
303 COG1834 N-Dimethylarginine dim 28.8 2.5E+02 0.0054 24.2 6.7 65 77-167 41-106 (267)
304 PF06901 FrpC: RTX iron-regula 28.6 32 0.00069 27.9 1.3 14 4-17 59-72 (271)
305 KOG1154 Gamma-glutamyl kinase 28.5 90 0.0019 26.4 3.9 31 76-106 37-67 (285)
306 cd07043 STAS_anti-anti-sigma_f 28.5 1.2E+02 0.0026 20.7 4.2 36 77-114 60-95 (99)
307 TIGR00640 acid_CoA_mut_C methy 28.1 95 0.0021 23.5 3.8 38 74-111 68-107 (132)
308 COG0602 NrdG Organic radical a 27.8 73 0.0016 26.3 3.3 27 72-98 84-110 (212)
309 cd02072 Glm_B12_BD B12 binding 27.8 71 0.0015 24.2 3.0 40 72-111 63-110 (128)
310 PF13704 Glyco_tranf_2_4: Glyc 27.7 1.1E+02 0.0024 21.1 4.0 33 76-108 7-40 (97)
311 cd05006 SIS_GmhA Phosphoheptos 27.1 56 0.0012 25.8 2.5 28 71-98 112-139 (177)
312 PRK13937 phosphoheptose isomer 26.6 65 0.0014 25.9 2.8 28 72-99 118-145 (188)
313 PF03193 DUF258: Protein of un 26.3 3.1E+02 0.0068 21.6 6.5 33 77-109 2-34 (161)
314 TIGR02668 moaA_archaeal probab 25.5 1.6E+02 0.0034 25.5 5.3 30 69-98 66-96 (302)
315 PF07453 NUMOD1: NUMOD1 domain 25.3 1.2E+02 0.0025 17.0 3.0 28 3-30 1-29 (37)
316 PF02142 MGS: MGS-like domain 25.3 63 0.0014 22.6 2.3 32 75-111 1-32 (95)
317 cd05013 SIS_RpiR RpiR-like pro 25.2 70 0.0015 23.4 2.6 25 74-98 74-98 (139)
318 TIGR00377 ant_ant_sig anti-ant 25.1 1.4E+02 0.003 21.0 4.1 36 78-115 66-101 (108)
319 PF01740 STAS: STAS domain; I 24.8 92 0.002 22.4 3.2 36 77-114 70-105 (117)
320 cd03018 PRX_AhpE_like Peroxire 24.8 1.5E+02 0.0032 22.2 4.4 36 75-110 50-85 (149)
321 PF12261 T_hemolysin: Thermost 24.7 1.8E+02 0.004 23.4 5.0 34 78-113 107-140 (179)
322 PRK00994 F420-dependent methyl 24.7 1.2E+02 0.0027 25.6 4.0 40 72-111 72-111 (277)
323 COG4312 Uncharacterized protei 24.3 1.9E+02 0.0042 24.1 5.0 50 73-124 98-147 (247)
324 cd04795 SIS SIS domain. SIS (S 24.1 76 0.0016 21.2 2.5 22 73-94 60-81 (87)
325 cd07041 STAS_RsbR_RsbS_like Su 23.7 1.9E+02 0.004 20.4 4.6 34 77-112 63-96 (109)
326 COG1852 Uncharacterized conser 23.7 1.4E+02 0.003 24.4 4.0 32 75-108 121-152 (209)
327 TIGR02468 sucrsPsyn_pln sucros 23.5 1.7E+02 0.0037 30.5 5.6 45 77-121 790-839 (1050)
328 TIGR00441 gmhA phosphoheptose 23.3 69 0.0015 24.8 2.3 28 72-99 91-118 (154)
329 PF08445 FR47: FR47-like prote 23.1 2.2E+02 0.0049 19.4 4.7 35 78-112 45-79 (86)
330 PF10307 DUF2410: Hypothetical 22.8 4.3E+02 0.0093 21.6 7.6 74 85-183 69-146 (197)
331 cd03017 PRX_BCP Peroxiredoxin 22.5 1.8E+02 0.0038 21.4 4.4 36 76-111 46-81 (140)
332 cd05005 SIS_PHI Hexulose-6-pho 22.3 83 0.0018 24.9 2.7 28 72-99 87-114 (179)
333 cd06589 GH31 The enzymes of gl 22.0 1E+02 0.0022 26.2 3.3 27 71-97 63-89 (265)
334 cd08185 Fe-ADH1 Iron-containin 21.9 4.7E+02 0.01 23.5 7.8 30 156-185 70-100 (380)
335 cd06537 CIDE_N_B CIDE_N domain 21.9 57 0.0012 22.5 1.3 17 4-20 40-56 (81)
336 cd06539 CIDE_N_A CIDE_N domain 21.9 57 0.0012 22.3 1.3 16 4-19 41-56 (78)
337 PF08620 RPAP1_C: RPAP1-like, 21.8 33 0.00071 23.2 0.2 9 7-15 4-12 (73)
338 cd04906 ACT_ThrD-I_1 First of 21.3 1.1E+02 0.0024 20.9 2.8 23 75-97 54-76 (85)
339 TIGR03556 photolyase_8HDF deox 21.3 90 0.002 29.2 3.0 38 74-111 55-92 (471)
340 smart00266 CAD Domains present 21.1 55 0.0012 22.2 1.1 16 4-19 39-54 (74)
341 PF03020 LEM: LEM domain; Int 21.0 15 0.00033 22.0 -1.4 31 78-108 10-40 (43)
342 COG1911 RPL30 Ribosomal protei 20.8 3.2E+02 0.007 19.6 4.9 46 63-108 11-56 (100)
343 PRK00414 gmhA phosphoheptose i 20.6 1E+02 0.0022 24.9 2.8 28 72-99 123-150 (192)
344 COG1366 SpoIIAA Anti-anti-sigm 20.4 2.1E+02 0.0044 20.8 4.3 35 78-114 67-101 (117)
345 PF00696 AA_kinase: Amino acid 20.1 2E+02 0.0044 23.7 4.7 37 75-112 21-57 (242)
346 PRK01045 ispH 4-hydroxy-3-meth 20.1 6E+02 0.013 22.3 8.5 23 89-111 68-90 (298)
No 1
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=100.00 E-value=2.8e-38 Score=262.35 Aligned_cols=226 Identities=50% Similarity=0.940 Sum_probs=204.9
Q ss_pred EEEEEcCCcccCCccHHHHHHHhCCChH---HHhhcCCCChHHHHHHHHHHHHhCCCCHHHHHHHHhcCCCCCCHHHHHH
Q 044553 5 VVIFDFDKTIIDCDSDNFVVDELGATDL---FNQLLPTMPWNSLMDRMMKELHSQGKTIEDIVEVLKRIPIHPRVVPAIK 81 (275)
Q Consensus 5 ~viFD~DGTL~d~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~ 81 (275)
+|+||||+||+|.++..++++.++.... .........|.++++.+++.++..+.+.+++.+.++.+++.||+.++++
T Consensus 2 LvvfDFD~TIvd~dsd~~v~~~l~~~~~~~~l~~~~~~~~wt~~m~~vl~~L~~~gvt~~~I~~~l~~ip~~pgm~~~l~ 81 (234)
T PF06888_consen 2 LVVFDFDHTIVDQDSDDWVIELLPPEELPEELRESYPKGGWTEYMDRVLQLLHEQGVTPEDIRDALRSIPIDPGMKELLR 81 (234)
T ss_pred EEEEeCCCCccCCccHHHHHHhcCCcccHHHHHHhccccchHHHHHHHHHHHHHcCCCHHHHHHHHHcCCCCccHHHHHH
Confidence 7899999999999999999999987644 3333444569999999999999999999999999999999999999999
Q ss_pred HH--HHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchHHHHH
Q 044553 82 SA--HALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIE 159 (275)
Q Consensus 82 ~L--~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~l~ 159 (275)
.+ ++.|+.++|+|++...+|+.+|++.|+...|+.|++|...++.+|.+...|++. |.|..|+.++||..+++
T Consensus 82 ~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G~l~v~pyh~-----h~C~~C~~NmCK~~il~ 156 (234)
T PF06888_consen 82 FLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDADGRLRVRPYHS-----HGCSLCPPNMCKGKILE 156 (234)
T ss_pred HHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecCCceEEEeCccC-----CCCCcCCCccchHHHHH
Confidence 99 457999999999999999999999999999999999999999999988889885 78999999999999999
Q ss_pred HHHHhhhcC--CCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHHHHHHHHHH
Q 044553 160 RIQASLSKE--GNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQILLHLV 235 (275)
Q Consensus 160 ~~~~~~~~~--~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el~~~l~~~~ 235 (275)
+++...... .+++++|||||.||+|++.+++..|++++|.||++++++++++....|.+++|++..||++.|++++
T Consensus 157 ~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~~R~~~~l~~~i~~~~~~~~a~v~~W~~g~~i~~~l~~~i 234 (234)
T PF06888_consen 157 RLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVFPRKGYPLHKLIQKNPGEVKAEVVPWSSGEEILEILLQLI 234 (234)
T ss_pred HHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEecCCCChHHHHHhcCCCcceeEEEecCCHHHHHHHHHhhC
Confidence 999874222 2589999999999999999999999999999999999999888788899999999999999998764
No 2
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=100.00 E-value=1.3e-37 Score=247.76 Aligned_cols=235 Identities=60% Similarity=1.019 Sum_probs=217.5
Q ss_pred CceEEEEEcCCcccCCccHHHHHHHhCCChHHHhhcCCCC---hHHHHHHHHHHHHhCCCCHHHHHHHHhcCCCCCCHHH
Q 044553 2 SGIVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMP---WNSLMDRMMKELHSQGKTIEDIVEVLKRIPIHPRVVP 78 (275)
Q Consensus 2 ~~~~viFD~DGTL~d~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e 78 (275)
...+++||||-||+|.++..++.+.++......++..... |.+++.+++++++..+.+.+++.+.++.++..||+.+
T Consensus 12 ~ril~~FDFD~TIid~dSD~wVv~~lp~~~l~~qL~~t~p~~~Wne~M~rv~k~Lheqgv~~~~ik~~~r~iP~~Pgmv~ 91 (256)
T KOG3120|consen 12 PRILLVFDFDRTIIDQDSDNWVVDELPTTDLFNQLRDTYPKGFWNELMDRVFKELHEQGVRIAEIKQVLRSIPIVPGMVR 91 (256)
T ss_pred CcEEEEEecCceeecCCcchHHHHhcccchhHHHHHHhcccchHHHHHHHHHHHHHHcCCCHHHHHHHHhcCCCCccHHH
Confidence 4678999999999999999999999999877766666555 9999999999999999999999999999999999999
Q ss_pred HHHHHHHcCC-cEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchHHH
Q 044553 79 AIKSAHALGC-ELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVV 157 (275)
Q Consensus 79 ~L~~L~~~g~-~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~ 157 (275)
+++.+++.|. .+.|||..+..+|+.+|+++|+.+.|+.|++|+..+++.|.+...|++. +|.|..||.++||..+
T Consensus 92 lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da~G~L~v~pyH~----~hsC~~CPsNmCKg~V 167 (256)
T KOG3120|consen 92 LIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDASGRLLVRPYHT----QHSCNLCPSNMCKGLV 167 (256)
T ss_pred HHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCCCCcEEeecCCC----CCccCcCchhhhhhHH
Confidence 9999999984 9999999999999999999999999999999999999999999999884 7999999999999999
Q ss_pred HHHHHHhhhcC--CCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHHHHHHHHHH
Q 044553 158 IERIQASLSKE--GNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQILLHLV 235 (275)
Q Consensus 158 l~~~~~~~~~~--~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el~~~l~~~~ 235 (275)
+.++....... .+++++|||||.||+|+...++..+++++|.||++|+++..++....|.+.+|++..|+..+|..++
T Consensus 168 l~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkgfpl~k~~~~~p~~~kasV~~W~sg~d~~~~L~~li 247 (256)
T KOG3120|consen 168 LDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKGFPLWKLISANPMLLKASVLEWSSGEDLERILQQLI 247 (256)
T ss_pred HHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCCCchHhhhhcCcceeeeeEEecccHHHHHHHHHHHH
Confidence 99998765322 2579999999999999999999999999999999999999899889999999999999999999999
Q ss_pred HHhcc
Q 044553 236 NTIGS 240 (275)
Q Consensus 236 ~~~~~ 240 (275)
..+-+
T Consensus 248 k~~~~ 252 (256)
T KOG3120|consen 248 KTIQV 252 (256)
T ss_pred HHhhh
Confidence 88876
No 3
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=99.94 E-value=4.6e-26 Score=190.43 Aligned_cols=212 Identities=20% Similarity=0.260 Sum_probs=151.1
Q ss_pred CCceEEEEEcCCcccCCccHHHHHHHhCCChHH---Hhhc-CCCChHHHHHHHHHHHHhCCCCHHHHHHH-HhcCCCCCC
Q 044553 1 MSGIVVIFDFDKTIIDCDSDNFVVDELGATDLF---NQLL-PTMPWNSLMDRMMKELHSQGKTIEDIVEV-LKRIPIHPR 75 (275)
Q Consensus 1 m~~~~viFD~DGTL~d~~~~~~~~~~~g~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~pg 75 (275)
|++++|+|||||||+++++...+++.++.+.+. ..+. +...+.+.++.++..+.. ...+++.+. .....++||
T Consensus 1 ~~~~~vifDfDgTi~~~d~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~l~pG 78 (219)
T PRK09552 1 MMSIQIFCDFDGTITNNDNIIAIMKKFAPPEWEELKDDILSQELSIQEGVGQMFQLLPS--NLKEEIIQFLLETAEIREG 78 (219)
T ss_pred CCCcEEEEcCCCCCCcchhhHHHHHHhCHHHHHHHHHHHHhCCcCHHHHHHHHHHhCCC--CchHHHHHHHHhCCCcCcC
Confidence 788899999999999999977667777653221 1222 345677888888777542 223555554 457899999
Q ss_pred HHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchH
Q 044553 76 VVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKG 155 (275)
Q Consensus 76 ~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~ 155 (275)
+.++|++|+++|++++|+||+...+++.+++++ +.. +.+++++..++.++....||+|...+ +.. .++.+|.
T Consensus 79 ~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~--~~i~~n~~~~~~~~~~~~kp~p~~~~----~~~-~~~~~K~ 150 (219)
T PRK09552 79 FHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPK--EQIYCNGSDFSGEYITITWPHPCDEH----CQN-HCGCCKP 150 (219)
T ss_pred HHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCc--CcEEEeEEEecCCeeEEeccCCcccc----ccc-cCCCchH
Confidence 999999999999999999999999999999998 653 45777766555444445577764100 000 1356799
Q ss_pred HHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHHHHHHHHHH
Q 044553 156 VVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQILLHLV 235 (275)
Q Consensus 156 ~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el~~~l~~~~ 235 (275)
.+++.+... +++|+|||||.+|+++|+.+ ++++++. .+.+. ++..+.+ +++|++|.|+...|+++.
T Consensus 151 ~~l~~~~~~-----~~~~i~iGDs~~Di~aa~~A---g~~~a~~--~l~~~-~~~~~~~---~~~~~~f~ei~~~l~~~~ 216 (219)
T PRK09552 151 SLIRKLSDT-----NDFHIVIGDSITDLEAAKQA---DKVFARD--FLITK-CEELGIP---YTPFETFHDVQTELKHLL 216 (219)
T ss_pred HHHHHhccC-----CCCEEEEeCCHHHHHHHHHC---CcceeHH--HHHHH-HHHcCCC---ccccCCHHHHHHHHHHHh
Confidence 888877543 46899999999999999664 5566654 22222 2233333 668999999999998876
Q ss_pred H
Q 044553 236 N 236 (275)
Q Consensus 236 ~ 236 (275)
+
T Consensus 217 ~ 217 (219)
T PRK09552 217 E 217 (219)
T ss_pred c
Confidence 5
No 4
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=99.93 E-value=1.3e-24 Score=176.96 Aligned_cols=184 Identities=39% Similarity=0.694 Sum_probs=142.7
Q ss_pred eEEEEEcCCcccCCccHHHHHHHhCCChH---HHhhcCCCChHHHHHHHHHHHHhCCCCHHHHHHHHhcCCCCCCHHHHH
Q 044553 4 IVVIFDFDKTIIDCDSDNFVVDELGATDL---FNQLLPTMPWNSLMDRMMKELHSQGKTIEDIVEVLKRIPIHPRVVPAI 80 (275)
Q Consensus 4 ~~viFD~DGTL~d~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L 80 (275)
-+|+|||||||++.++...+++.++.+.+ .........+......+...+...+.+.+++.+.....+++||+.++|
T Consensus 2 ~~iiFD~dgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~ll 81 (188)
T TIGR01489 2 VVVVSDFDGTITLNDSDDWITDKFGPPEANRLLDGVLSKTLSIKFMDRRMKGLLPSGLKEDEILEVLKSAPIDPGFKEFI 81 (188)
T ss_pred eEEEEeCCCcccCCCchHHHHHhcCcchhhHHHHHHhhcCCchHHHHHHHHHHhhcCCCHHHHHHHHHhCCCCccHHHHH
Confidence 57999999999999998888888874322 222222222333333333333344566777888888899999999999
Q ss_pred HHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchHHHHHH
Q 044553 81 KSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIER 160 (275)
Q Consensus 81 ~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~l~~ 160 (275)
+.|+++|++++|+||+....++.+++++|+..+|+.|++++..++.+|.....|.. .+.|..++.+.+|..++++
T Consensus 82 ~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~g~~~~~~~~-----~~~~~~~~~g~~K~~~~~~ 156 (188)
T TIGR01489 82 AFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFDNDGRHIVWPHH-----CHGCCSCPCGCCKGKVIHK 156 (188)
T ss_pred HHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceECCCCcEEEecCC-----CCccCcCCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999988888877776543 1223335677889999999
Q ss_pred HHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecC
Q 044553 161 IQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK 199 (275)
Q Consensus 161 ~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~ 199 (275)
++.++ +++++|||||.+|+++|+. ++++|+|+
T Consensus 157 ~~~~~----~~~~i~iGD~~~D~~aa~~---~d~~~ar~ 188 (188)
T TIGR01489 157 LSEPK----YQHIIYIGDGVTDVCPAKL---SDVVFAKE 188 (188)
T ss_pred HHhhc----CceEEEECCCcchhchHhc---CCccccCC
Confidence 98763 4799999999999999955 58888863
No 5
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=99.93 E-value=7.9e-25 Score=169.95 Aligned_cols=209 Identities=24% Similarity=0.371 Sum_probs=165.0
Q ss_pred CCceEEEEEcCCcccCCccHHHHHHHhCCChHH---HhhcC-CCChHHHHHHHHHHHHhCCCCHHHHHHH-HhcCCCCCC
Q 044553 1 MSGIVVIFDFDKTIIDCDSDNFVVDELGATDLF---NQLLP-TMPWNSLMDRMMKELHSQGKTIEDIVEV-LKRIPIHPR 75 (275)
Q Consensus 1 m~~~~viFD~DGTL~d~~~~~~~~~~~g~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~pg 75 (275)
|.+-.|+.|||||++-.++...+.+.+|.+.+. ...+. ..++++.+.+|+..++ .+.+++.+. ...+.+.||
T Consensus 1 mkk~vi~sDFDGTITl~Ds~~~itdtf~~~e~k~l~~~vls~tiS~rd~~g~mf~~i~---~s~~Eile~llk~i~Idp~ 77 (220)
T COG4359 1 MKKPVIFSDFDGTITLNDSNDYITDTFGPGEWKALKDGVLSKTISFRDGFGRMFGSIH---SSLEEILEFLLKDIKIDPG 77 (220)
T ss_pred CCceEEEecCCCceEecchhHHHHhccCchHHHHHHHHHhhCceeHHHHHHHHHHhcC---CCHHHHHHHHHhhcccCcc
Confidence 556667789999999999999999999998664 33443 5677888888888774 355665554 456999999
Q ss_pred HHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCc--ceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCc
Q 044553 76 VVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCF--SEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMC 153 (275)
Q Consensus 76 ~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~f--d~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~ 153 (275)
+++++++.++++++++|+|+|+..++..++++++=.+.. -.|+++..++..+|.+..+ +++ ..+ .+.+
T Consensus 78 fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~-~~~--ds~-------fG~d 147 (220)
T COG4359 78 FKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIK-YTD--DSQ-------FGHD 147 (220)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCceeee-cCC--ccc-------cCCC
Confidence 999999999999999999999999999999998622221 2688888888888877665 222 223 3456
Q ss_pred hHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHH--hhCCCceeEEEeeCCChHHHHHHH
Q 044553 154 KGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLI--IRNPMLIKAEIHEWTDGEELEQIL 231 (275)
Q Consensus 154 K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~el~~~l 231 (275)
|...+..+.+. ++.++|+|||.+|+.|| ...+++|++. +|+ |+..+.+ +++|++|.|++..+
T Consensus 148 K~~vI~~l~e~-----~e~~fy~GDsvsDlsaa---klsDllFAK~-----~L~nyc~eqn~~---f~~fe~F~eIlk~i 211 (220)
T COG4359 148 KSSVIHELSEP-----NESIFYCGDSVSDLSAA---KLSDLLFAKD-----DLLNYCREQNLN---FLEFETFYEILKEI 211 (220)
T ss_pred cchhHHHhhcC-----CceEEEecCCcccccHh---hhhhhHhhHH-----HHHHHHHHcCCC---CcccccHHHHHHHH
Confidence 99999998764 57899999999999999 5589999987 566 5555555 66899999999999
Q ss_pred HHHHHHh
Q 044553 232 LHLVNTI 238 (275)
Q Consensus 232 ~~~~~~~ 238 (275)
++++...
T Consensus 212 ekvl~~~ 218 (220)
T COG4359 212 EKVLEVQ 218 (220)
T ss_pred HHHHhhh
Confidence 9988643
No 6
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=99.92 E-value=7.2e-25 Score=183.31 Aligned_cols=199 Identities=18% Similarity=0.219 Sum_probs=136.0
Q ss_pred CCceEEEEEcCCcccCCcc-----HHHHHHHhCCCh-HHHhhcC--CCChHHHHHHHHHHHHhCC--CCH----HHHHHH
Q 044553 1 MSGIVVIFDFDKTIIDCDS-----DNFVVDELGATD-LFNQLLP--TMPWNSLMDRMMKELHSQG--KTI----EDIVEV 66 (275)
Q Consensus 1 m~~~~viFD~DGTL~d~~~-----~~~~~~~~g~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~--~~~----~~~~~~ 66 (275)
|++++|+||+||||+|+.. ++.+++.+|.+. ....... +......+.+......... ... +.+.+.
T Consensus 2 ~~~~~iiFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (220)
T COG0546 2 MMIKAILFDLDGTLVDSAEDILRAFNAALAELGLPPLDEEEIRQLIGLGLDELIERLLGEADEEAAAELVERLREEFLTA 81 (220)
T ss_pred CCCCEEEEeCCCccccChHHHHHHHHHHHHHcCCCCCCHHHHHHHhcCCHHHHHHHHhccccchhHHHHHHHHHHHHHHH
Confidence 5689999999999999965 367888888873 2222111 1222323332221100000 000 111122
Q ss_pred H-hc--CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCC
Q 044553 67 L-KR--IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSH 143 (275)
Q Consensus 67 ~-~~--~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~ 143 (275)
. +. ..++||+.++|++|+++|++++|+||++...++.+++++|+.++|+.+++.+... ..||+|
T Consensus 82 ~~~~~~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g~~~~~------~~KP~P------- 148 (220)
T COG0546 82 YAELLESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVP------PPKPDP------- 148 (220)
T ss_pred HHhhccCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEcCCCCC------CCCcCH-------
Confidence 2 22 4799999999999999999999999999999999999999999999999844432 457766
Q ss_pred CCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCch-hhHHHhhCCCceeEEEeeCC
Q 044553 144 GCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFP-LWDLIIRNPMLIKAEIHEWT 222 (275)
Q Consensus 144 ~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~ 222 (275)
..+..++..++.. +++++||||+.+|+.+|+++|. ..+.+.+|+. ...+....+ .+.++
T Consensus 149 ------------~~l~~~~~~~~~~-~~~~l~VGDs~~Di~aA~~Ag~-~~v~v~~g~~~~~~l~~~~~------d~vi~ 208 (220)
T COG0546 149 ------------EPLLLLLEKLGLD-PEEALMVGDSLNDILAAKAAGV-PAVGVTWGYNSREELAQAGA------DVVID 208 (220)
T ss_pred ------------HHHHHHHHHhCCC-hhheEEECCCHHHHHHHHHcCC-CEEEEECCCCCCcchhhcCC------CEEEC
Confidence 5666777777766 5799999999999999999995 4444455542 222222222 34789
Q ss_pred ChHHHHHHHH
Q 044553 223 DGEELEQILL 232 (275)
Q Consensus 223 ~~~el~~~l~ 232 (275)
++.||..++.
T Consensus 209 ~~~el~~~l~ 218 (220)
T COG0546 209 SLAELLALLA 218 (220)
T ss_pred CHHHHHHHHh
Confidence 9999998775
No 7
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=99.92 E-value=3e-24 Score=178.85 Aligned_cols=207 Identities=20% Similarity=0.241 Sum_probs=149.6
Q ss_pred EEEEcCCcccCCccHHHHHHHhCCChHH---HhhcC-CCChHHHHHHHHHHHHhCCCCHHHHHHHH-hcCCCCCCHHHHH
Q 044553 6 VIFDFDKTIIDCDSDNFVVDELGATDLF---NQLLP-TMPWNSLMDRMMKELHSQGKTIEDIVEVL-KRIPIHPRVVPAI 80 (275)
Q Consensus 6 viFD~DGTL~d~~~~~~~~~~~g~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~pg~~e~L 80 (275)
|+|||||||++.++...+++.++.+.+. ..+.. ..++.+.++.++..+.... .+++.+++ ....++||+.++|
T Consensus 2 ~~fDFDgTit~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~e~~~~~~~~~~~~~--~~~~~~~~~~~~~l~pg~~e~l 79 (214)
T TIGR03333 2 IICDFDGTITNNDNIISIMKQFAPPEWEALKDGVLSKTLSIQEGVGRMFGLLPSSL--KEEITSFVLETAEIREGFREFV 79 (214)
T ss_pred EEeccCCCCCcchhHHHHHHHhCcHHHHHHHHHHHcCCccHHHHHHHHHhhCCCch--HHHHHHHHHhcCcccccHHHHH
Confidence 7999999999999988888887654332 23333 4567888877776653221 34555543 4689999999999
Q ss_pred HHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchHHHHHH
Q 044553 81 KSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIER 160 (275)
Q Consensus 81 ~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~l~~ 160 (275)
++|+++|++++|+|++...+++.+++.++.. +.+++++..++.++....+|+|. .+.|.. .|+.||..++++
T Consensus 80 ~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~---~~i~~n~~~~~~~~~~~~~p~~~----~~~~~~-~cg~~K~~~l~~ 151 (214)
T TIGR03333 80 AFINEHGIPFYVISGGMDFFVYPLLEGIVEK---DRIYCNEADFSNEYIHIDWPHPC----DGTCQN-QCGCCKPSLIRK 151 (214)
T ss_pred HHHHHCCCeEEEECCCcHHHHHHHHHhhCCc---ccEEeceeEeeCCeeEEeCCCCC----cccccc-CCCCCHHHHHHH
Confidence 9999999999999999999999999987542 56778777665444444467664 121111 236789999998
Q ss_pred HHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHHHHHHHHHHH
Q 044553 161 IQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQILLHLVN 236 (275)
Q Consensus 161 ~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el~~~l~~~~~ 236 (275)
+... +++++|||||.+|+++|.. +++++++. . +... ++..+.+ +.+|++|.|+...|+++.+
T Consensus 152 ~~~~-----~~~~i~iGDg~~D~~~a~~---Ad~~~ar~-~-l~~~-~~~~~~~---~~~~~~f~di~~~l~~~~~ 213 (214)
T TIGR03333 152 LSEP-----NDYHIVIGDSVTDVEAAKQ---SDLCFARD-Y-LLNE-CEELGLN---HAPFQDFYDVRKELENVKE 213 (214)
T ss_pred Hhhc-----CCcEEEEeCCHHHHHHHHh---CCeeEehH-H-HHHH-HHHcCCC---ccCcCCHHHHHHHHHHHhc
Confidence 8753 4689999999999999854 67788876 2 2122 3333333 5689999999999986653
No 8
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=99.92 E-value=8.3e-24 Score=176.85 Aligned_cols=195 Identities=15% Similarity=0.110 Sum_probs=135.4
Q ss_pred ceEEEEEcCCcccCCcc-----HHHHHHHhCCChHHHhh---cCCCChHHHHHHHHHHHHhCCCCH---HH----HHHH-
Q 044553 3 GIVVIFDFDKTIIDCDS-----DNFVVDELGATDLFNQL---LPTMPWNSLMDRMMKELHSQGKTI---ED----IVEV- 66 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~-----~~~~~~~~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~---~~----~~~~- 66 (275)
+++|+||+||||+|+.. +..+++++|.+....+. ..+....+.++.++... +.+. ++ +.+.
T Consensus 1 ~k~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 77 (220)
T TIGR03351 1 ISLVVLDMAGTTVDEDGLVYRALRQAVTAAGLSPTPEEVQSAWMGQSKIEAIRALLALD---GADEAEAQAAFADFEERL 77 (220)
T ss_pred CcEEEEecCCCeeccCchHHHHHHHHHHHcCCCCCHHHHHHhhcCCCHHHHHHHHHhcc---CCCHHHHHHHHHHHHHHH
Confidence 47899999999999965 35677778875332222 22333444444443321 2221 11 1111
Q ss_pred ---H--hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCc--CCcceEecCCCccCCCCceeecccCCCC
Q 044553 67 ---L--KRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIR--DCFSEINTNPGFVDEEGRLRIFPFHDFT 139 (275)
Q Consensus 67 ---~--~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~--~~fd~i~~~~~~~~~~g~~~~kp~~~~~ 139 (275)
. ....++||+.++|++|+++|++++|+||+....++.+++++|+. .+|+.+++++... ..||.|
T Consensus 78 ~~~~~~~~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~------~~KP~p--- 148 (220)
T TIGR03351 78 AEAYDDGPPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVA------AGRPAP--- 148 (220)
T ss_pred HHHhcccCCccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCC------CCCCCH---
Confidence 1 13579999999999999999999999999999999999999998 9999999876532 346644
Q ss_pred CCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCC-eEeecCCchhhHHHhhCCCceeEEE
Q 044553 140 KCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGD-HVMPRKNFPLWDLIIRNPMLIKAEI 218 (275)
Q Consensus 140 ~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~ 218 (275)
+++..++.+++..++++|+||||+.+|+.+|+++|+.. +++..+......+.+..+ .
T Consensus 149 ----------------~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~------~ 206 (220)
T TIGR03351 149 ----------------DLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPH------T 206 (220)
T ss_pred ----------------HHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCC------c
Confidence 67778888776653589999999999999999999987 555443333333322222 2
Q ss_pred eeCCChHHHHHHH
Q 044553 219 HEWTDGEELEQIL 231 (275)
Q Consensus 219 ~~~~~~~el~~~l 231 (275)
+.++++.+|...+
T Consensus 207 ~~i~~~~~l~~~~ 219 (220)
T TIGR03351 207 HVLDSVADLPALL 219 (220)
T ss_pred eeecCHHHHHHhh
Confidence 3578888887653
No 9
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=99.92 E-value=2.3e-24 Score=179.48 Aligned_cols=195 Identities=15% Similarity=0.104 Sum_probs=133.5
Q ss_pred CCceEEEEEcCCcccCCcc-----HHHHHHHhCCCh-HHHhhc--CCCChHHHHHHHHHHHHhCCCCHHH----HHH---
Q 044553 1 MSGIVVIFDFDKTIIDCDS-----DNFVVDELGATD-LFNQLL--PTMPWNSLMDRMMKELHSQGKTIED----IVE--- 65 (275)
Q Consensus 1 m~~~~viFD~DGTL~d~~~-----~~~~~~~~g~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~----~~~--- 65 (275)
|++++|+||+||||+|+.. +..++++++... ...... .+.+....+.. +.. ...+. +..
T Consensus 1 m~~~~viFD~DGTL~ds~~~~~~a~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~----~~~--~~~~~~~~~~~~~~~ 74 (214)
T PRK13288 1 MKINTVLFDLDGTLINTNELIISSFLHTLKTYYPNQYKREDVLPFIGPSLHDTFSK----IDE--SKVEEMITTYREFNH 74 (214)
T ss_pred CCccEEEEeCCCcCccCHHHHHHHHHHHHHHhCCCCCCHHHHHHHhCcCHHHHHHh----cCH--HHHHHHHHHHHHHHH
Confidence 7889999999999999965 355677776532 111111 12222222221 110 01111 111
Q ss_pred --HHhcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCC
Q 044553 66 --VLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSH 143 (275)
Q Consensus 66 --~~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~ 143 (275)
......++||+.++|++|+++|++++|+||+....+..+++.+|+..+|+.+++.+... ..||.|
T Consensus 75 ~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~------~~Kp~p------- 141 (214)
T PRK13288 75 EHHDELVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVITLDDVE------HAKPDP------- 141 (214)
T ss_pred HhhhhhcccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEecCcCC------CCCCCc-------
Confidence 12346799999999999999999999999999999999999999999999999876532 345544
Q ss_pred CCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCC
Q 044553 144 GCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTD 223 (275)
Q Consensus 144 ~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 223 (275)
+.+++++.+++.. +++++||||+.+|+.+|+++|...+++..+..+..++...++ ...+++
T Consensus 142 ------------~~~~~~~~~~~~~-~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~------~~~i~~ 202 (214)
T PRK13288 142 ------------EPVLKALELLGAK-PEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKP------DFMLDK 202 (214)
T ss_pred ------------HHHHHHHHHcCCC-HHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCc------CEEECC
Confidence 6777788777654 589999999999999999998866655443233333332222 225789
Q ss_pred hHHHHHHHHH
Q 044553 224 GEELEQILLH 233 (275)
Q Consensus 224 ~~el~~~l~~ 233 (275)
+.|+.+++.+
T Consensus 203 ~~~l~~~i~~ 212 (214)
T PRK13288 203 MSDLLAIVGD 212 (214)
T ss_pred HHHHHHHHhh
Confidence 9999887754
No 10
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=99.91 E-value=2.6e-23 Score=178.95 Aligned_cols=207 Identities=12% Similarity=0.036 Sum_probs=136.8
Q ss_pred CC-ceEEEEEcCCcccCCcc------HHHHHHHhCCChHHHhhcC--CCChHHHHHHH---------HHHHHhCCCCHHH
Q 044553 1 MS-GIVVIFDFDKTIIDCDS------DNFVVDELGATDLFNQLLP--TMPWNSLMDRM---------MKELHSQGKTIED 62 (275)
Q Consensus 1 m~-~~~viFD~DGTL~d~~~------~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~---------~~~~~~~~~~~~~ 62 (275)
|+ +++|+||+||||+|+.. +..+++.+|.+........ +......++.+ +....+...+.++
T Consensus 1 ~~~~k~vIFDlDGTLiDs~~~~~~~a~~~~~~~~g~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 80 (267)
T PRK13478 1 MMKIQAVIFDWAGTTVDFGSFAPTQAFVEAFAQFGVEITLEEARGPMGLGKWDHIRALLKMPRVAARWQAVFGRLPTEAD 80 (267)
T ss_pred CCceEEEEEcCCCCeecCCCccHHHHHHHHHHHcCCCCCHHHHHHhcCCCHHHHHHHHHhcHHHHHHHHHHhCCCCCHHH
Confidence 44 69999999999999853 2456677787532222211 11222212211 1111111112221
Q ss_pred H-------HHH-----HhcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCc-ceEecCCCccCCCCc
Q 044553 63 I-------VEV-----LKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCF-SEINTNPGFVDEEGR 129 (275)
Q Consensus 63 ~-------~~~-----~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~f-d~i~~~~~~~~~~g~ 129 (275)
+ ... .....++||+.++|+.|+++|++++|+||++...+..+++.+++..+| +.|++++...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~~~~~----- 155 (267)
T PRK13478 81 VDALYAAFEPLQIAKLADYATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTDDVP----- 155 (267)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcCCcCC-----
Confidence 1 111 234789999999999999999999999999999999999999988875 8888776532
Q ss_pred eeecccCCCCCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCch-------
Q 044553 130 LRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFP------- 202 (275)
Q Consensus 130 ~~~kp~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~------- 202 (275)
..||+| ..+..++.+++..++++|+|||||.+|+.+|+++|...+.+..+...
T Consensus 156 -~~KP~p-------------------~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~ 215 (267)
T PRK13478 156 -AGRPYP-------------------WMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILSGNELGLSEEE 215 (267)
T ss_pred -CCCCCh-------------------HHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccCcccccCCHHH
Confidence 347755 56777777777644589999999999999999999876666544321
Q ss_pred ----------------hhHHHhhCCCceeEEEeeCCChHHHHHHHHHHHHHh
Q 044553 203 ----------------LWDLIIRNPMLIKAEIHEWTDGEELEQILLHLVNTI 238 (275)
Q Consensus 203 ----------------~~~l~~~~~~~~~~~~~~~~~~~el~~~l~~~~~~~ 238 (275)
...+.... + .+.++++.||.+++..+..+.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~l~~~~-----a-~~vi~~~~~l~~~l~~~~~~~ 261 (267)
T PRK13478 216 YQALSAAELAARRERARARLRAAG-----A-HYVIDTIADLPAVIADIEARL 261 (267)
T ss_pred HHhcCHHHHHHHHHHHHHHHHHcC-----C-CeehhhHHHHHHHHHHHHHHH
Confidence 11222222 1 346899999998887665443
No 11
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=99.91 E-value=4.4e-23 Score=176.16 Aligned_cols=171 Identities=13% Similarity=0.017 Sum_probs=117.7
Q ss_pred ceEEEEEcCCcccCCcc------HHHHHHHhCCChHHHhhcC--CCChHHHHHH----------HHHHHHhCCCCHHH--
Q 044553 3 GIVVIFDFDKTIIDCDS------DNFVVDELGATDLFNQLLP--TMPWNSLMDR----------MMKELHSQGKTIED-- 62 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~------~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~----------~~~~~~~~~~~~~~-- 62 (275)
+++|+|||||||+|+.. +..+++++|.+........ +......+.. +...+ +...+.++
T Consensus 2 ~k~viFD~DGTLiDs~~~~~~~a~~~~~~~~g~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 80 (253)
T TIGR01422 2 IEAVIFDWAGTTVDFGSFAPTQAFVEAFAEFGVQITLEEARGPMGLGKWDHIRALLKMPAVAERWRAKF-GRLPTEADIE 80 (253)
T ss_pred ceEEEEeCCCCeecCCCccHHHHHHHHHHHcCCCccHHHHHHhcCccHHHHHHHHhcCHHHHHHHHHHh-CCCCCHHHHH
Confidence 57999999999999853 2446667776532222221 1111111111 11111 11112211
Q ss_pred -----HHH-----HHhcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCc-ceEecCCCccCCCCcee
Q 044553 63 -----IVE-----VLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCF-SEINTNPGFVDEEGRLR 131 (275)
Q Consensus 63 -----~~~-----~~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~f-d~i~~~~~~~~~~g~~~ 131 (275)
+.. ......++||+.++|+.|+++|++++|+||++...++.+++++|+..+| +.|++++... .
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~~~~------~ 154 (253)
T TIGR01422 81 AIYEAFEPLQLAKLAEYSSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTDDVP------A 154 (253)
T ss_pred HHHHHHHHHHHHHHHhcCccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccccCC------C
Confidence 111 1234789999999999999999999999999999999999999999986 8888876532 3
Q ss_pred ecccCCCCCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecC
Q 044553 132 IFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK 199 (275)
Q Consensus 132 ~kp~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~ 199 (275)
.||.| +.+...+.+++...+++|+|||||.+|+.+|+++|...+++..+
T Consensus 155 ~KP~p-------------------~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~~i~v~~g 203 (253)
T TIGR01422 155 GRPAP-------------------WMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMWTVGLILS 203 (253)
T ss_pred CCCCH-------------------HHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCeEEEEecC
Confidence 47755 56667777776533589999999999999999999877766543
No 12
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=99.91 E-value=1.9e-23 Score=177.79 Aligned_cols=194 Identities=14% Similarity=0.083 Sum_probs=131.3
Q ss_pred CceEEEEEcCCcccCCcc-----HHHHHHHhCCC----hHH---HhhcCCCChHHHHHHHHHHHHhCCCC-HHH----HH
Q 044553 2 SGIVVIFDFDKTIIDCDS-----DNFVVDELGAT----DLF---NQLLPTMPWNSLMDRMMKELHSQGKT-IED----IV 64 (275)
Q Consensus 2 ~~~~viFD~DGTL~d~~~-----~~~~~~~~g~~----~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~ 64 (275)
++++|+|||||||+|+.. +..+++++|.+ ... .....+.........++......... .+. +.
T Consensus 21 ~~k~viFDlDGTLiDs~~~~~~a~~~~~~~~g~~~g~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ 100 (248)
T PLN02770 21 PLEAVLFDVDGTLCDSDPLHYYAFREMLQEINFNGGVPITEEFFVENIAGKHNEDIALGLFPDDLERGLKFTDDKEALFR 100 (248)
T ss_pred ccCEEEEcCCCccCcCHHHHHHHHHHHHHHhccccCCCCCHHHHHHHcCCCCHHHHHHHHcCcchhhHHHHHHHHHHHHH
Confidence 368999999999999965 46677787642 111 11222333443333322110000000 011 12
Q ss_pred HHH-hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCC
Q 044553 65 EVL-KRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSH 143 (275)
Q Consensus 65 ~~~-~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~ 143 (275)
... ....++||+.++|++|+++|++++|+||+....++..++++|+.++|+.|++++... ..||+|
T Consensus 101 ~~~~~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~~~~~------~~KP~p------- 167 (248)
T PLN02770 101 KLASEQLKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGSECE------HAKPHP------- 167 (248)
T ss_pred HHHHhcCCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEecCcCC------CCCCCh-------
Confidence 222 358899999999999999999999999999999999999999999999999887642 357766
Q ss_pred CCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCC
Q 044553 144 GCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTD 223 (275)
Q Consensus 144 ~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 223 (275)
+.+...+.+++.. |++|+||||+.+|+.+|+++|...+++.. +++...+....+ ...+++
T Consensus 168 ------------~~~~~a~~~~~~~-~~~~l~vgDs~~Di~aA~~aGi~~i~v~~-g~~~~~l~~~~a------~~vi~~ 227 (248)
T PLN02770 168 ------------DPYLKALEVLKVS-KDHTFVFEDSVSGIKAGVAAGMPVVGLTT-RNPESLLMEAKP------TFLIKD 227 (248)
T ss_pred ------------HHHHHHHHHhCCC-hhHEEEEcCCHHHHHHHHHCCCEEEEEeC-CCCHHHHhhcCC------CEEecc
Confidence 5566677776654 58999999999999999999987666644 444333432222 235688
Q ss_pred hHHHH
Q 044553 224 GEELE 228 (275)
Q Consensus 224 ~~el~ 228 (275)
+.|+.
T Consensus 228 ~~e~~ 232 (248)
T PLN02770 228 YEDPK 232 (248)
T ss_pred chhhH
Confidence 88733
No 13
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=99.90 E-value=3.5e-23 Score=176.83 Aligned_cols=199 Identities=12% Similarity=0.131 Sum_probs=140.9
Q ss_pred ceEEEEEcCCcccCCcc------HHHHHHHhCCChHHHh---hcCCCChHHHHHHHHHHHHhCCCCH---HHH----HHH
Q 044553 3 GIVVIFDFDKTIIDCDS------DNFVVDELGATDLFNQ---LLPTMPWNSLMDRMMKELHSQGKTI---EDI----VEV 66 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~------~~~~~~~~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~---~~~----~~~ 66 (275)
.++|||||||||+|+.. +..+++++|++....+ ...+......++.++. ...+. +++ ...
T Consensus 24 ~k~vIFDlDGTLvDS~~~~~~~a~~~~~~~~G~~~~~~e~~~~~~G~~~~~~~~~l~~----~~~~~~~~~~l~~~~~~~ 99 (260)
T PLN03243 24 WLGVVLEWEGVIVEDDSELERKAWRALAEEEGKRPPPAFLLKRAEGMKNEQAISEVLC----WSRDFLQMKRLAIRKEDL 99 (260)
T ss_pred ceEEEEeCCCceeCCchHHHHHHHHHHHHHcCCCCCHHHHHHHhcCCCHHHHHHHHhc----cCCCHHHHHHHHHHHHHH
Confidence 68999999999999952 2567778887632221 1223344444433321 11111 111 111
Q ss_pred H-----hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCC
Q 044553 67 L-----KRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKC 141 (275)
Q Consensus 67 ~-----~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~ 141 (275)
. ....++||+.++|+.|+++|++++|+||++...++.+++++|+..+|+.|++++... ..||+|
T Consensus 100 ~~~~~~~~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~~d~~------~~KP~P----- 168 (260)
T PLN03243 100 YEYMQGGLYRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAAEDVY------RGKPDP----- 168 (260)
T ss_pred HHHHHccCcccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEecccCC------CCCCCH-----
Confidence 1 246789999999999999999999999999999999999999999999999876532 357765
Q ss_pred CCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeC
Q 044553 142 SHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEW 221 (275)
Q Consensus 142 ~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 221 (275)
.++..++.+++.. +++|+|||||.+|+.+|+++|+..+++. +..+...+ . .+ ...+
T Consensus 169 --------------e~~~~a~~~l~~~-p~~~l~IgDs~~Di~aA~~aG~~~i~v~-g~~~~~~l-~------~a-d~vi 224 (260)
T PLN03243 169 --------------EMFMYAAERLGFI-PERCIVFGNSNSSVEAAHDGCMKCVAVA-GKHPVYEL-S------AG-DLVV 224 (260)
T ss_pred --------------HHHHHHHHHhCCC-hHHeEEEcCCHHHHHHHHHcCCEEEEEe-cCCchhhh-c------cC-CEEe
Confidence 5677777777665 5899999999999999999999776664 32222221 1 12 2368
Q ss_pred CChHHHHHHHHHHHHHhcc
Q 044553 222 TDGEELEQILLHLVNTIGS 240 (275)
Q Consensus 222 ~~~~el~~~l~~~~~~~~~ 240 (275)
++++||..+....+.....
T Consensus 225 ~~~~el~~~~~~~~~~~~~ 243 (260)
T PLN03243 225 RRLDDLSVVDLKNLSDLDS 243 (260)
T ss_pred CCHHHHHHHHHhhhhccCC
Confidence 9999999888877776654
No 14
>PLN02954 phosphoserine phosphatase
Probab=99.90 E-value=1.7e-22 Score=169.43 Aligned_cols=207 Identities=18% Similarity=0.246 Sum_probs=138.3
Q ss_pred CCceEEEEEcCCcccCCccHHHHHHHhCCChHHH----hhcC-CCChHHHHHHHHHHHHhCCCCHHHHHHHHhc--CCCC
Q 044553 1 MSGIVVIFDFDKTIIDCDSDNFVVDELGATDLFN----QLLP-TMPWNSLMDRMMKELHSQGKTIEDIVEVLKR--IPIH 73 (275)
Q Consensus 1 m~~~~viFD~DGTL~d~~~~~~~~~~~g~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 73 (275)
|.+|+|+|||||||+++++...+++.+|.+.... .+.. ...+.+.+...+.... ...+.+.+.+.. ..++
T Consensus 10 ~~~k~viFDfDGTL~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~ 86 (224)
T PLN02954 10 RSADAVCFDVDSTVCVDEGIDELAEFCGAGEAVAEWTAKAMGGSVPFEEALAARLSLFK---PSLSQVEEFLEKRPPRLS 86 (224)
T ss_pred ccCCEEEEeCCCcccchHHHHHHHHHcCChHHHHHHHHHHHCCCCCHHHHHHHHHHHcC---CCHHHHHHHHHHccCCCC
Confidence 4579999999999999999999999999863332 2222 3455555555444432 345555555543 5689
Q ss_pred CCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCc
Q 044553 74 PRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMC 153 (275)
Q Consensus 74 pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~ 153 (275)
||+.++|++|+++|++++|+|++....++.+++.+|+... .++++...++.+|...+.+..+ + . ..+.+
T Consensus 87 pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~--~~~~~~~~~~~~g~~~g~~~~~----~----~-~~~~~ 155 (224)
T PLN02954 87 PGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPE--NIFANQILFGDSGEYAGFDENE----P----T-SRSGG 155 (224)
T ss_pred ccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChh--hEEEeEEEEcCCCcEECccCCC----c----c-cCCcc
Confidence 9999999999999999999999999999999999999631 2333322233334333322110 0 0 11245
Q ss_pred hHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHHHHHH
Q 044553 154 KGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQIL 231 (275)
Q Consensus 154 K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el~~~l 231 (275)
|..+++.++..++ .++++|||||.+|+.+++. +..+++++.+++...+.....+ ...++++.+|.+++
T Consensus 156 K~~~i~~~~~~~~---~~~~i~iGDs~~Di~aa~~-~~~~~~~~~~~~~~~~~~~~~~------~~~i~~~~el~~~~ 223 (224)
T PLN02954 156 KAEAVQHIKKKHG---YKTMVMIGDGATDLEARKP-GGADLFIGYGGVQVREAVAAKA------DWFVTDFQDLIEVL 223 (224)
T ss_pred HHHHHHHHHHHcC---CCceEEEeCCHHHHHhhhc-CCCCEEEecCCCccCHHHHhcC------CEEECCHHHHHHhh
Confidence 8899999887764 3689999999999999766 4456666554432223222222 22578898887654
No 15
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=99.90 E-value=4.3e-23 Score=173.67 Aligned_cols=196 Identities=14% Similarity=0.120 Sum_probs=131.3
Q ss_pred CceEEEEEcCCcccCCcc-----HHHHHHHhCCChHHHhhcC---CCChHHHHHHHHHHHHhCCCCHHH----HHHH---
Q 044553 2 SGIVVIFDFDKTIIDCDS-----DNFVVDELGATDLFNQLLP---TMPWNSLMDRMMKELHSQGKTIED----IVEV--- 66 (275)
Q Consensus 2 ~~~~viFD~DGTL~d~~~-----~~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~----~~~~--- 66 (275)
++++|+|||||||+|+.. +..+++++|.+....+... +......+........ ....++ +.+.
T Consensus 11 ~~k~viFD~DGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 88 (229)
T PRK13226 11 FPRAVLFDLDGTLLDSAPDMLATVNAMLAARGRAPITLAQLRPVVSKGARAMLAVAFPELD--AAARDALIPEFLQRYEA 88 (229)
T ss_pred cCCEEEEcCcCccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHHhhhHHHHHHHHHhccCC--hHHHHHHHHHHHHHHHH
Confidence 358999999999999964 4667888887532211111 1112222221111000 000111 2211
Q ss_pred --HhcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCC
Q 044553 67 --LKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHG 144 (275)
Q Consensus 67 --~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~ 144 (275)
.....++||+.++|++|+++|++++|+||+....++..++++|+..+|+.+++++... ..||+|
T Consensus 89 ~~~~~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~------~~KP~p-------- 154 (229)
T PRK13226 89 LIGTQSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGDTLA------ERKPHP-------- 154 (229)
T ss_pred hhhhcCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccEEEecCcCC------CCCCCH--------
Confidence 1347899999999999999999999999999999999999999999999888766421 457755
Q ss_pred CCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchh-hHHHhhCCCceeEEEeeCCC
Q 044553 145 CNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPL-WDLIIRNPMLIKAEIHEWTD 223 (275)
Q Consensus 145 ~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~ 223 (275)
+.+..++.+++.. |++|+||||+.+|+.+|+++|...+++..+.... ..+...++ ...+++
T Consensus 155 -----------~~~~~~~~~l~~~-p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~------~~~i~~ 216 (229)
T PRK13226 155 -----------LPLLVAAERIGVA-PTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQA------DVLVEQ 216 (229)
T ss_pred -----------HHHHHHHHHhCCC-hhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCC------CeeeCC
Confidence 5677777777665 5899999999999999999998776664332111 11222222 236789
Q ss_pred hHHHHHHH
Q 044553 224 GEELEQIL 231 (275)
Q Consensus 224 ~~el~~~l 231 (275)
+.||.+.+
T Consensus 217 ~~el~~~~ 224 (229)
T PRK13226 217 PQLLWNPA 224 (229)
T ss_pred HHHHHHHh
Confidence 99988765
No 16
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=99.90 E-value=6.4e-23 Score=176.33 Aligned_cols=194 Identities=18% Similarity=0.213 Sum_probs=134.2
Q ss_pred ceEEEEEcCCcccCCcc-----HHHHHHHhCCChHHH----hhcCCCChHHHHHHHHHHHHhCCCCHHH--------HHH
Q 044553 3 GIVVIFDFDKTIIDCDS-----DNFVVDELGATDLFN----QLLPTMPWNSLMDRMMKELHSQGKTIED--------IVE 65 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~-----~~~~~~~~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~ 65 (275)
+++++||+||||+|+.. +..+++++|.+.... ...+ .....++ +.+.......++ +..
T Consensus 62 ~k~vIFDlDGTLiDS~~~~~~a~~~~~~~~G~~~~~~~~~~~~~g-~~~~~i~----~~~~~~~~~~~~~~~~~~~~~~~ 136 (273)
T PRK13225 62 LQAIIFDFDGTLVDSLPTVVAIANAHAPDFGYDPIDERDYAQLRQ-WSSRTIV----RRAGLSPWQQARLLQRVQRQLGD 136 (273)
T ss_pred cCEEEECCcCccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHHhC-ccHHHHH----HHcCCCHHHHHHHHHHHHHHHHh
Confidence 57899999999999964 366778888752211 1111 1122222 211100001111 112
Q ss_pred HHhcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCC
Q 044553 66 VLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGC 145 (275)
Q Consensus 66 ~~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~ 145 (275)
....++++||+.++|+.|+++|++++|+||+....++.+++++|+.++|+.+++.+.. +
T Consensus 137 ~~~~~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi~~~~~---------~------------ 195 (273)
T PRK13225 137 CLPALQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQAGTPI---------L------------ 195 (273)
T ss_pred hcccCCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEEEEecCCC---------C------------
Confidence 2345789999999999999999999999999999999999999999999988765431 0
Q ss_pred CcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChH
Q 044553 146 NLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGE 225 (275)
Q Consensus 146 ~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 225 (275)
.|...+..++.+++.. +++|+||||+.+|+.+|+++|+..+.+..+..+..++.+..+ .+.++++.
T Consensus 196 -------~k~~~~~~~l~~~~~~-p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~a------d~~i~~~~ 261 (273)
T PRK13225 196 -------SKRRALSQLVAREGWQ-PAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACP------DWLLETPS 261 (273)
T ss_pred -------CCHHHHHHHHHHhCcC-hhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCC------CEEECCHH
Confidence 1346677777776654 589999999999999999999876666544333344443332 23689999
Q ss_pred HHHHHHHHHHH
Q 044553 226 ELEQILLHLVN 236 (275)
Q Consensus 226 el~~~l~~~~~ 236 (275)
+|..++.++++
T Consensus 262 eL~~~~~~~~~ 272 (273)
T PRK13225 262 DLLQAVTQLMR 272 (273)
T ss_pred HHHHHHHHHhc
Confidence 99999887764
No 17
>PRK09449 dUMP phosphatase; Provisional
Probab=99.89 E-value=2.2e-22 Score=168.67 Aligned_cols=198 Identities=14% Similarity=0.141 Sum_probs=131.2
Q ss_pred CCceEEEEEcCCcccCCccH---HHHHHHhCCChHH---Hhh--cC----------CCChHHHHHHHHHHH-HhCCCCHH
Q 044553 1 MSGIVVIFDFDKTIIDCDSD---NFVVDELGATDLF---NQL--LP----------TMPWNSLMDRMMKEL-HSQGKTIE 61 (275)
Q Consensus 1 m~~~~viFD~DGTL~d~~~~---~~~~~~~g~~~~~---~~~--~~----------~~~~~~~~~~~~~~~-~~~~~~~~ 61 (275)
|++++|+||+||||+|.+.. ..+++.+|.+... ... .. ...........+... ...+.+.+
T Consensus 1 m~~k~iiFDlDGTLid~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (224)
T PRK09449 1 MKYDWILFDADETLFHFDAFAGLQRMFSRYGVDFTAEDFQDYQAVNKPLWVDYQNGAITALQLQHTRFESWAEKLNVTPG 80 (224)
T ss_pred CCccEEEEcCCCchhcchhhHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHcCCCHH
Confidence 77899999999999986542 4456667764211 111 10 011111111001111 11122222
Q ss_pred HHH----H-HHhcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccC
Q 044553 62 DIV----E-VLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFH 136 (275)
Q Consensus 62 ~~~----~-~~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~ 136 (275)
++. + +.....++||+.++|+.|+ +|++++|+||+....++..++++|+.++|+.+++++... ..||+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~------~~KP~p 153 (224)
T PRK09449 81 ELNSAFLNAMAEICTPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYFDLLVISEQVG------VAKPDV 153 (224)
T ss_pred HHHHHHHHHHhhcCccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHcCEEEEECccC------CCCCCH
Confidence 222 2 2234789999999999999 589999999999999999999999999999998876532 346655
Q ss_pred CCCCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCC-CCcccccccCCCCeEeecCCchhhHHHhhCCCcee
Q 044553 137 DFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGS-GDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIK 215 (275)
Q Consensus 137 ~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 215 (275)
.+++.++.+++..++++|+||||+. +|+.+|+++|+..+++.+++... . ....
T Consensus 154 -------------------~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~--~-----~~~~ 207 (224)
T PRK09449 154 -------------------AIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQ--P-----EGIA 207 (224)
T ss_pred -------------------HHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCC--C-----CCCC
Confidence 6777888877654457899999998 69999999999877776544311 0 0011
Q ss_pred EEEeeCCChHHHHHHHH
Q 044553 216 AEIHEWTDGEELEQILL 232 (275)
Q Consensus 216 ~~~~~~~~~~el~~~l~ 232 (275)
+ ...++++.||.++++
T Consensus 208 ~-~~~i~~~~el~~~l~ 223 (224)
T PRK09449 208 P-TYQVSSLSELEQLLC 223 (224)
T ss_pred C-eEEECCHHHHHHHHh
Confidence 2 346899999988765
No 18
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=99.89 E-value=6.1e-23 Score=169.83 Aligned_cols=190 Identities=15% Similarity=0.151 Sum_probs=128.2
Q ss_pred EEEEcCCcccCCcc-----HHHHHHH-hCCChH-HHhh--cCCCChHHHHHHHHHHHHhCCCC-H----HHHHHHHhcCC
Q 044553 6 VIFDFDKTIIDCDS-----DNFVVDE-LGATDL-FNQL--LPTMPWNSLMDRMMKELHSQGKT-I----EDIVEVLKRIP 71 (275)
Q Consensus 6 viFD~DGTL~d~~~-----~~~~~~~-~g~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~ 71 (275)
|+|||||||+|+.. ++.++++ +|.+.. .... ..+..+...++. +. .... . .+.......+.
T Consensus 1 iiFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~ 75 (205)
T TIGR01454 1 VVFDLDGVLVDSFAVMREAFAIAYREVVGDGPAPFEEYRRHLGRYFPDIMRI----MG-LPLEMEEPFVRESYRLAGEVE 75 (205)
T ss_pred CeecCcCccccCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHhCccHHHHHHH----cC-CCHHHHHHHHHHHHHhhcccc
Confidence 68999999999965 3555555 365321 1111 112222322221 11 0000 1 11112234688
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCC
Q 044553 72 IHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPN 151 (275)
Q Consensus 72 ~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~ 151 (275)
++||+.++|++|+++|++++|+||+....++..++++|+..+|+.+++.+... ..||.|
T Consensus 76 ~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~------~~KP~~--------------- 134 (205)
T TIGR01454 76 VFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIGSDEVP------RPKPAP--------------- 134 (205)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEecCcCC------CCCCCh---------------
Confidence 99999999999999999999999999999999999999999999998876431 346644
Q ss_pred CchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHHHHHH
Q 044553 152 MCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQIL 231 (275)
Q Consensus 152 ~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el~~~l 231 (275)
..+..++..++.. +++|+||||+.+|+.+|+++|...+.+..+.....++....+ ...++++.+|..++
T Consensus 135 ----~~~~~~~~~~~~~-~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~------~~~~~~~~~l~~~~ 203 (205)
T TIGR01454 135 ----DIVREALRLLDVP-PEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARP------DFLLRKPQSLLALC 203 (205)
T ss_pred ----HHHHHHHHHcCCC-hhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCC------CeeeCCHHHHHHHh
Confidence 6777777777655 589999999999999999999876655433223334433322 22579999998766
Q ss_pred H
Q 044553 232 L 232 (275)
Q Consensus 232 ~ 232 (275)
+
T Consensus 204 ~ 204 (205)
T TIGR01454 204 R 204 (205)
T ss_pred h
Confidence 4
No 19
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=99.89 E-value=2.3e-22 Score=168.38 Aligned_cols=195 Identities=19% Similarity=0.212 Sum_probs=131.9
Q ss_pred CceEEEEEcCCcccCCccH-----HHHHHHhCCChHH-HhhcC--CCChHHHHHHHHHHHHhCCCCHHHH----H----H
Q 044553 2 SGIVVIFDFDKTIIDCDSD-----NFVVDELGATDLF-NQLLP--TMPWNSLMDRMMKELHSQGKTIEDI----V----E 65 (275)
Q Consensus 2 ~~~~viFD~DGTL~d~~~~-----~~~~~~~g~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~----~----~ 65 (275)
+.++|+|||||||+|+... ..+++++|.+... ..... +.......+.........+...+++ . +
T Consensus 6 ~~k~iiFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (222)
T PRK10826 6 QILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRREELPDTLGLRIDQVVDLWYARQPWNGPSRQEVVQRIIARVIS 85 (222)
T ss_pred cCcEEEEcCCCCCCcCHHHHHHHHHHHHHHCCCCCCHHHHHHHhhCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHH
Confidence 3789999999999999653 4567778875322 11111 1122222222222211112222221 1 1
Q ss_pred -HHhcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCC
Q 044553 66 -VLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHG 144 (275)
Q Consensus 66 -~~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~ 144 (275)
......++||+.++|+.|+++|++++|+||+....++.+++++|+..+|+.+++++... .+||.|
T Consensus 86 ~~~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~------~~Kp~~-------- 151 (222)
T PRK10826 86 LIEETRPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALASAEKLP------YSKPHP-------- 151 (222)
T ss_pred HHhcCCCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEEEEcccCC------CCCCCH--------
Confidence 12357899999999999999999999999999999999999999999999999876432 346544
Q ss_pred CCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCCh
Q 044553 145 CNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDG 224 (275)
Q Consensus 145 ~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 224 (275)
+.++.++.+++.. |++|+||||+.+|+.+|+.+|...+++.+.... .+.... .+ ...+.++
T Consensus 152 -----------~~~~~~~~~~~~~-~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~-~~~~~~-----~~-~~~~~~~ 212 (222)
T PRK10826 152 -----------EVYLNCAAKLGVD-PLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQ-NDPRWA-----LA-DVKLESL 212 (222)
T ss_pred -----------HHHHHHHHHcCCC-HHHeEEEcCChhhHHHHHHcCCEEEEecCCccC-chhhhh-----hh-heeccCH
Confidence 6778888888765 589999999999999999999877666554321 111111 12 3367888
Q ss_pred HHHHH
Q 044553 225 EELEQ 229 (275)
Q Consensus 225 ~el~~ 229 (275)
.||..
T Consensus 213 ~dl~~ 217 (222)
T PRK10826 213 TELTA 217 (222)
T ss_pred HHHhh
Confidence 88865
No 20
>PRK11587 putative phosphatase; Provisional
Probab=99.89 E-value=2.7e-22 Score=167.61 Aligned_cols=169 Identities=13% Similarity=0.062 Sum_probs=117.1
Q ss_pred CCceEEEEEcCCcccCCcc-----HHHHHHHhCCChHH-HhhcCCCChHHHHHHHHHHHHhCCCCHHHHHH-------HH
Q 044553 1 MSGIVVIFDFDKTIIDCDS-----DNFVVDELGATDLF-NQLLPTMPWNSLMDRMMKELHSQGKTIEDIVE-------VL 67 (275)
Q Consensus 1 m~~~~viFD~DGTL~d~~~-----~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~ 67 (275)
|++++|+|||||||+|+.. +..+++++|++... .....+......++.+...... ..-.+.+.. ..
T Consensus 1 M~~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 79 (218)
T PRK11587 1 MRCKGFLFDLDGTLVDSLPAVERAWSNWADRHGIAPDEVLNFIHGKQAITSLRHFMAGASE-AEIQAEFTRLEQIEATDT 79 (218)
T ss_pred CCCCEEEEcCCCCcCcCHHHHHHHHHHHHHHcCCCHHHHHHHHcCCCHHHHHHHHhccCCc-HHHHHHHHHHHHHHHhhh
Confidence 8889999999999999964 36688888986421 1222233333333322211000 000111111 12
Q ss_pred hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCc
Q 044553 68 KRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNL 147 (275)
Q Consensus 68 ~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~ 147 (275)
....++||+.++|+.|+++|++++|+||++...+...++..++ .+|+.+++++... ..||+|
T Consensus 80 ~~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l-~~~~~i~~~~~~~------~~KP~p----------- 141 (218)
T PRK11587 80 EGITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL-PAPEVFVTAERVK------RGKPEP----------- 141 (218)
T ss_pred cCceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC-CCccEEEEHHHhc------CCCCCc-----------
Confidence 3578999999999999999999999999998888888888898 4577787765431 347766
Q ss_pred CCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEee
Q 044553 148 CPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMP 197 (275)
Q Consensus 148 ~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~ 197 (275)
..+...+..++.. |++|+|||||..|+.+|+++|...+++.
T Consensus 142 --------~~~~~~~~~~g~~-p~~~l~igDs~~di~aA~~aG~~~i~v~ 182 (218)
T PRK11587 142 --------DAYLLGAQLLGLA-PQECVVVEDAPAGVLSGLAAGCHVIAVN 182 (218)
T ss_pred --------HHHHHHHHHcCCC-cccEEEEecchhhhHHHHHCCCEEEEEC
Confidence 4556666666655 5899999999999999999998766664
No 21
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=99.89 E-value=1.5e-21 Score=161.44 Aligned_cols=200 Identities=16% Similarity=0.172 Sum_probs=141.9
Q ss_pred ceEEEEEcCCcccCCccHHHHHHHhCCChHHHhhcCCCChHHHHHHHHHHHHhCCCCHHHHHHHHhcCCCCCCHHHHHHH
Q 044553 3 GIVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTIEDIVEVLKRIPIHPRVVPAIKS 82 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~ 82 (275)
+++|+|||||||++. .+..+++.+|.+...........+...+...+..+...+.+.+++........++||+.++|+.
T Consensus 1 ~~~v~FD~DGTL~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~pg~~e~L~~ 79 (205)
T PRK13582 1 MEIVCLDLEGVLVPE-IWIAFAEKTGIPELRATTRDIPDYDVLMKQRLDILDEHGLGLADIQEVIATLDPLPGAVEFLDW 79 (205)
T ss_pred CeEEEEeCCCCChhh-HHHHHHHHcCChHHHHHhcCCCCHHHHHHHHHHHHHHcCCCHHHHHHHHHhCCCCCCHHHHHHH
Confidence 478999999999964 6677888999875443333445677777777776665567788888888999999999999999
Q ss_pred HHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchHHHHHHHH
Q 044553 83 AHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQ 162 (275)
Q Consensus 83 L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~l~~~~ 162 (275)
|+++ ++++|+||+....++.+++++|+..+|+..+..+ .+|.+.+... ++..+|...++.+.
T Consensus 80 L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~----~~~~i~~~~~-------------~~p~~k~~~l~~~~ 141 (205)
T PRK13582 80 LRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVD----EDGMITGYDL-------------RQPDGKRQAVKALK 141 (205)
T ss_pred HHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEEC----CCCeEECccc-------------cccchHHHHHHHHH
Confidence 9999 9999999999999999999999988776544322 1222221110 01123677777654
Q ss_pred HhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHHHHHHHHHHH
Q 044553 163 ASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQILLHLVN 236 (275)
Q Consensus 163 ~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el~~~l~~~~~ 236 (275)
.. +++++|||||.+|+.++.+++. ++.+.. . .......+. ...++++.+|..++.++..
T Consensus 142 ~~-----~~~~v~iGDs~~D~~~~~aa~~-~v~~~~-~---~~~~~~~~~-----~~~~~~~~el~~~l~~~~~ 200 (205)
T PRK13582 142 SL-----GYRVIAAGDSYNDTTMLGEADA-GILFRP-P---ANVIAEFPQ-----FPAVHTYDELLAAIDKASA 200 (205)
T ss_pred Hh-----CCeEEEEeCCHHHHHHHHhCCC-CEEECC-C---HHHHHhCCc-----ccccCCHHHHHHHHHHHHh
Confidence 32 4799999999999988877664 444321 1 122222221 2368999999988887764
No 22
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=99.89 E-value=1.2e-22 Score=168.92 Aligned_cols=192 Identities=17% Similarity=0.200 Sum_probs=128.9
Q ss_pred EEEEcCCcccCCcc-----HHHHHHHhCCCh-HHHhhcC--CCChHHHHHHHHHHHHhCCCCH---HH----HHHHH---
Q 044553 6 VIFDFDKTIIDCDS-----DNFVVDELGATD-LFNQLLP--TMPWNSLMDRMMKELHSQGKTI---ED----IVEVL--- 67 (275)
Q Consensus 6 viFD~DGTL~d~~~-----~~~~~~~~g~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~---~~----~~~~~--- 67 (275)
|+|||||||+|+.. +..+++++|.+. ....... +......++.++..... ..+. ++ +.+.+
T Consensus 1 viFD~DGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 79 (213)
T TIGR01449 1 VLFDLDGTLVDSAPDIAAAVNMALAALGLPPATLARVIGFIGNGVPVLMERVLAWAGQ-EPDAQRVAELRKLFDRHYEEV 79 (213)
T ss_pred CeecCCCccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHHhcccHHHHHHHHhhcccc-ccChHHHHHHHHHHHHHHHHh
Confidence 69999999999865 355667777752 1111111 22223333333322111 1111 11 12222
Q ss_pred --hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCC
Q 044553 68 --KRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGC 145 (275)
Q Consensus 68 --~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~ 145 (275)
....++||+.++|+.|+++|++++|+||+....++.+++++|+..+|+.+++++... ..||.|
T Consensus 80 ~~~~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~------~~Kp~p--------- 144 (213)
T TIGR01449 80 AGELTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGGDSLA------QRKPHP--------- 144 (213)
T ss_pred ccccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEecCCCC------CCCCCh---------
Confidence 136899999999999999999999999999999999999999999999998876431 346644
Q ss_pred CcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChH
Q 044553 146 NLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGE 225 (275)
Q Consensus 146 ~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 225 (275)
+.+..++.+++.. +++|+||||+.+|+.+|+++|...+++..+......+.... + ...++++.
T Consensus 145 ----------~~~~~~~~~~~~~-~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~-----a-~~~i~~~~ 207 (213)
T TIGR01449 145 ----------DPLLLAAERLGVA-PQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLP-----P-DVLYDSLN 207 (213)
T ss_pred ----------HHHHHHHHHcCCC-hhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcC-----C-CeEeCCHH
Confidence 6778888887765 58999999999999999999987666643322222222221 2 23678999
Q ss_pred HHHHH
Q 044553 226 ELEQI 230 (275)
Q Consensus 226 el~~~ 230 (275)
||..+
T Consensus 208 ~l~~~ 212 (213)
T TIGR01449 208 ELPPL 212 (213)
T ss_pred HHHhh
Confidence 88764
No 23
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=99.89 E-value=4.7e-22 Score=166.69 Aligned_cols=200 Identities=18% Similarity=0.151 Sum_probs=136.2
Q ss_pred CceEEEEEcCCcccCCcc-----HHHHHHHhCCChH-HHhh--cCCCChHHHHHHHHHHHHhCCCCHHH-------HHHH
Q 044553 2 SGIVVIFDFDKTIIDCDS-----DNFVVDELGATDL-FNQL--LPTMPWNSLMDRMMKELHSQGKTIED-------IVEV 66 (275)
Q Consensus 2 ~~~~viFD~DGTL~d~~~-----~~~~~~~~g~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 66 (275)
++++|+||+||||+|+.. +..+++++|.+.. .... ..+......+...+... ....+.++ +.+.
T Consensus 5 ~~~~iiFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 83 (226)
T PRK13222 5 DIRAVAFDLDGTLVDSAPDLAAAVNAALAALGLPPAGEERVRTWVGNGADVLVERALTWA-GREPDEELLEKLRELFDRH 83 (226)
T ss_pred cCcEEEEcCCcccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHHhCccHHHHHHHHHhhc-cCCccHHHHHHHHHHHHHH
Confidence 478999999999999854 3556677777522 1111 11222333333333221 11222222 1121
Q ss_pred H-----hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCC
Q 044553 67 L-----KRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKC 141 (275)
Q Consensus 67 ~-----~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~ 141 (275)
+ ....++||+.++|+.|+++|++++|+||+....++.+++++|+..+|+.+++.+... ..||.
T Consensus 84 ~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~------~~kp~------ 151 (226)
T PRK13222 84 YAENVAGGSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGDSLP------NKKPD------ 151 (226)
T ss_pred HHHhccccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccEEEcCCCCC------CCCcC------
Confidence 1 147799999999999999999999999999999999999999999999888765421 33553
Q ss_pred CCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeC
Q 044553 142 SHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEW 221 (275)
Q Consensus 142 ~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 221 (275)
+.+++.++.+++.. +++|+||||+.+|+.+|+.+|...+++..+..+..++...++ ...+
T Consensus 152 -------------~~~~~~~~~~~~~~-~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~------~~~i 211 (226)
T PRK13222 152 -------------PAPLLLACEKLGLD-PEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEP------DVVI 211 (226)
T ss_pred -------------hHHHHHHHHHcCCC-hhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCC------CEEE
Confidence 36777888877665 589999999999999999999877777644322222222221 2367
Q ss_pred CChHHHHHHHHHH
Q 044553 222 TDGEELEQILLHL 234 (275)
Q Consensus 222 ~~~~el~~~l~~~ 234 (275)
+++.+|..++.+.
T Consensus 212 ~~~~~l~~~l~~~ 224 (226)
T PRK13222 212 DHFAELLPLLGLA 224 (226)
T ss_pred CCHHHHHHHHHHh
Confidence 9999999887653
No 24
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=99.87 E-value=1.2e-21 Score=173.54 Aligned_cols=197 Identities=14% Similarity=0.105 Sum_probs=135.2
Q ss_pred ceEEEEEcCCcccCCcc-H-----HHHHHHhCCChHHHh---hcCCCChHHHHHHHHHHHHhCCCCHHHH----HHHH--
Q 044553 3 GIVVIFDFDKTIIDCDS-D-----NFVVDELGATDLFNQ---LLPTMPWNSLMDRMMKELHSQGKTIEDI----VEVL-- 67 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~-~-----~~~~~~~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-- 67 (275)
.++|||||||||+|+.. . ..+++++|.+....+ ...+......+..++.... .....+++ .+.+
T Consensus 131 ~~~VIFDlDGTLIDS~~~i~~~a~~~l~~e~G~~~~~~e~~~~~~G~~~~~~l~~ll~~~~-~~~~~e~l~~~~~~~y~~ 209 (381)
T PLN02575 131 WLGAIFEWEGVIIEDNPDLENQAWLTLAQEEGKSPPPAFILRRVEGMKNEQAISEVLCWSR-DPAELRRMATRKEEIYQA 209 (381)
T ss_pred CCEEEEcCcCcceeCHHHHHHHHHHHHHHHcCCCCCHHHHHHHhcCCCHHHHHHHHhhccC-CHHHHHHHHHHHHHHHHH
Confidence 58999999999999864 2 346677787533222 2223444444444332100 00001111 1111
Q ss_pred ---hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCC
Q 044553 68 ---KRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHG 144 (275)
Q Consensus 68 ---~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~ 144 (275)
....++||+.++|+.|+++|++++|+||+....++.+++++|+..+|+.|++.+... ..||.|
T Consensus 210 ~~~~~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv~sddv~------~~KP~P-------- 275 (381)
T PLN02575 210 LQGGIYRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIVAAEDVY------RGKPDP-------- 275 (381)
T ss_pred HhccCCCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEEecCcCC------CCCCCH--------
Confidence 236789999999999999999999999999999999999999999999999877642 346655
Q ss_pred CCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCCh
Q 044553 145 CNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDG 224 (275)
Q Consensus 145 ~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 224 (275)
+++..++.+++.. +++|+||||+..|+.+|+++|+..+++.. ++...++ .. + ...++++
T Consensus 276 -----------eifl~A~~~lgl~-Peecl~IGDS~~DIeAAk~AGm~~IgV~~-~~~~~~l--~~-----A-d~iI~s~ 334 (381)
T PLN02575 276 -----------EMFIYAAQLLNFI-PERCIVFGNSNQTVEAAHDARMKCVAVAS-KHPIYEL--GA-----A-DLVVRRL 334 (381)
T ss_pred -----------HHHHHHHHHcCCC-cccEEEEcCCHHHHHHHHHcCCEEEEECC-CCChhHh--cC-----C-CEEECCH
Confidence 6777777777655 58999999999999999999997777653 3332221 11 1 2257999
Q ss_pred HHHHHHHHHHH
Q 044553 225 EELEQILLHLV 235 (275)
Q Consensus 225 ~el~~~l~~~~ 235 (275)
.||.....+.+
T Consensus 335 ~EL~~~~l~~l 345 (381)
T PLN02575 335 DELSIVDLKNL 345 (381)
T ss_pred HHHHHHHHhhh
Confidence 99855444333
No 25
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=99.87 E-value=7.1e-21 Score=159.01 Aligned_cols=173 Identities=18% Similarity=0.285 Sum_probs=126.5
Q ss_pred CceEEEEEcCCcccCCccHHHHHHHhCCChHHH----hhc-CCCChHHHHHHHHHHHHhCCCCHHHHHHHHhcCCCCCCH
Q 044553 2 SGIVVIFDFDKTIIDCDSDNFVVDELGATDLFN----QLL-PTMPWNSLMDRMMKELHSQGKTIEDIVEVLKRIPIHPRV 76 (275)
Q Consensus 2 ~~~~viFD~DGTL~d~~~~~~~~~~~g~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~ 76 (275)
++++++|||||||++++++..+++.+|.+.... ... +...+.....+.+..+. +...+.+........++||+
T Consensus 13 ~~k~iiFD~DGTL~~~~~~~~l~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~ 90 (219)
T TIGR00338 13 SKKLVVFDMDSTLINAETIDEIAKIAGVEEEVSEITERAMRGELDFKASLRERVALLK--GLPVELLKEVRENLPLTEGA 90 (219)
T ss_pred cCCEEEEeCcccCCCchHHHHHHHHhCCHHHHHHHHHHHHcCCCCHHHHHHHHHHHhC--CCCHHHHHHHHhcCCcCCCH
Confidence 468999999999999999888999998853322 222 23445555555444442 44556677777888999999
Q ss_pred HHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchHH
Q 044553 77 VPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGV 156 (275)
Q Consensus 77 ~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~ 156 (275)
.++|+.|+++|++++|+||+....++.+++++|+..+|+..+..+ +|.+.+..... . ..+.+|..
T Consensus 91 ~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~-----~~~~~~~~~~~-----~-----~~~~~k~~ 155 (219)
T TIGR00338 91 EELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVE-----DGKLTGLVEGP-----I-----VDASYKGK 155 (219)
T ss_pred HHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEE-----CCEEEEEecCc-----c-----cCCcccHH
Confidence 999999999999999999999999999999999987765433211 23333322111 0 01234889
Q ss_pred HHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCC
Q 044553 157 VIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEG 192 (275)
Q Consensus 157 ~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~ 192 (275)
+++.++.+++.. +++|+|||||.+|+.+|..+|..
T Consensus 156 ~~~~~~~~~~~~-~~~~i~iGDs~~Di~aa~~ag~~ 190 (219)
T TIGR00338 156 TLLILLRKEGIS-PENTVAVGDGANDLSMIKAAGLG 190 (219)
T ss_pred HHHHHHHHcCCC-HHHEEEEECCHHHHHHHHhCCCe
Confidence 999998887664 58999999999999999887663
No 26
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=99.87 E-value=2.1e-21 Score=159.72 Aligned_cols=112 Identities=18% Similarity=0.310 Sum_probs=95.7
Q ss_pred HHHHHhcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCC
Q 044553 63 IVEVLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCS 142 (275)
Q Consensus 63 ~~~~~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~ 142 (275)
+.+.+....++||+.++|++|+++|++++|+||++...++..++++|+..+|+.+++++..- ..||.|
T Consensus 84 ~~~~~~~~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~------~~KP~~------ 151 (198)
T TIGR01428 84 LAEAYLRLPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSADAVR------AYKPAP------ 151 (198)
T ss_pred HHHHHhcCCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEehhhcC------CCCCCH------
Confidence 44555678899999999999999999999999999999999999999999999999877531 346655
Q ss_pred CCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCC
Q 044553 143 HGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKN 200 (275)
Q Consensus 143 ~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~ 200 (275)
.+++.++.+++.. |+++++|||+.+|+.+|+++|+..+++.+.+
T Consensus 152 -------------~~~~~~~~~~~~~-p~~~~~vgD~~~Di~~A~~~G~~~i~v~r~~ 195 (198)
T TIGR01428 152 -------------QVYQLALEALGVP-PDEVLFVASNPWDLGGAKKFGFKTAWVNRPG 195 (198)
T ss_pred -------------HHHHHHHHHhCCC-hhhEEEEeCCHHHHHHHHHCCCcEEEecCCC
Confidence 6777787777765 5899999999999999999999888887765
No 27
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=99.87 E-value=1.7e-21 Score=167.79 Aligned_cols=204 Identities=16% Similarity=0.155 Sum_probs=135.5
Q ss_pred ceEEEEEcCCcccCCcc-----HHHHHHHhCCChH-HHhhc--CCCChHHHHHHHHHH-HHhCCCCH---HH----HHHH
Q 044553 3 GIVVIFDFDKTIIDCDS-----DNFVVDELGATDL-FNQLL--PTMPWNSLMDRMMKE-LHSQGKTI---ED----IVEV 66 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~-----~~~~~~~~g~~~~-~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~---~~----~~~~ 66 (275)
+++|+|||||||+|+.. +..+++++|.+.. ..... .+..........+.. ....+.+. ++ +.+.
T Consensus 13 ~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 92 (272)
T PRK13223 13 PRLVMFDLDGTLVDSVPDLAAAVDRMLLELGRPPAGLEAVRHWVGNGAPVLVRRALAGSIDHDGVDDELAEQALALFMEA 92 (272)
T ss_pred CCEEEEcCCCccccCHHHHHHHHHHHHHHcCCCCCCHHHHHHHhChhHHHHHHHHhcccccccCCCHHHHHHHHHHHHHH
Confidence 68999999999999954 4667788887532 11111 122222223322211 11111221 11 1222
Q ss_pred H----hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCC
Q 044553 67 L----KRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCS 142 (275)
Q Consensus 67 ~----~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~ 142 (275)
+ ....++||+.++|+.|+++|++++|+||++...++.+++++|+..+|+.+++++... ..||.|
T Consensus 93 ~~~~~~~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~~d~~~------~~Kp~p------ 160 (272)
T PRK13223 93 YADSHELTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGGDTLP------QKKPDP------ 160 (272)
T ss_pred HHhcCcCCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEecCCCC------CCCCCc------
Confidence 2 235689999999999999999999999999999999999999999999998876421 245544
Q ss_pred CCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCC
Q 044553 143 HGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWT 222 (275)
Q Consensus 143 ~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 222 (275)
..++.++..++.. +++|+||||+.+|+.+|+++|+..+++..+......+....+ ...++
T Consensus 161 -------------~~~~~~~~~~g~~-~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~------~~vi~ 220 (272)
T PRK13223 161 -------------AALLFVMKMAGVP-PSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESP------ALVID 220 (272)
T ss_pred -------------HHHHHHHHHhCCC-hhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCC------CEEEC
Confidence 6777777777655 589999999999999999999876666543222223322222 23578
Q ss_pred ChHHHHHHHHHHHHHh
Q 044553 223 DGEELEQILLHLVNTI 238 (275)
Q Consensus 223 ~~~el~~~l~~~~~~~ 238 (275)
++.+|.+.+.....++
T Consensus 221 ~l~el~~~~~~~~~~~ 236 (272)
T PRK13223 221 DLRALLPGCADPAAEI 236 (272)
T ss_pred CHHHHHHHHhcccccc
Confidence 9999987666444333
No 28
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=99.87 E-value=2.5e-21 Score=161.83 Aligned_cols=107 Identities=19% Similarity=0.179 Sum_probs=90.0
Q ss_pred hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCc
Q 044553 68 KRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNL 147 (275)
Q Consensus 68 ~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~ 147 (275)
..+.++||+.++|++|+++|++++|+||+....++..++++|+..+|+.+++++... ..||+|
T Consensus 91 ~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~------~~KP~~----------- 153 (221)
T TIGR02253 91 AYLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSEEEG------VEKPHP----------- 153 (221)
T ss_pred HhCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEEEeccCC------CCCCCH-----------
Confidence 347899999999999999999999999999999999999999999999998876532 346655
Q ss_pred CCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCC-CCcccccccCCCCeEeecCC
Q 044553 148 CPPNMCKGVVIERIQASLSKEGNKKIIYLGDGS-GDYCPSLKLSEGDHVMPRKN 200 (275)
Q Consensus 148 ~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~~~~~~~~~~~~ 200 (275)
+.++.++.+++.. +++++||||+. +|+.+|+++|+..+++....
T Consensus 154 --------~~~~~~~~~~~~~-~~~~~~igDs~~~di~~A~~aG~~~i~~~~~~ 198 (221)
T TIGR02253 154 --------KIFYAALKRLGVK-PEEAVMVGDRLDKDIKGAKNLGMKTVWINQGK 198 (221)
T ss_pred --------HHHHHHHHHcCCC-hhhEEEECCChHHHHHHHHHCCCEEEEECCCC
Confidence 6677777777655 48999999997 89999999998877766543
No 29
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=99.86 E-value=5.3e-21 Score=160.33 Aligned_cols=107 Identities=11% Similarity=0.111 Sum_probs=89.3
Q ss_pred HhcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCC
Q 044553 67 LKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCN 146 (275)
Q Consensus 67 ~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~ 146 (275)
.....++||+.++|+.|+++|++++|+||++...++..++++|+.++|+.+++++... ..||+|
T Consensus 89 ~~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~s~~~~------~~KP~p---------- 152 (224)
T PRK14988 89 GPRAVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTFG------YPKEDQ---------- 152 (224)
T ss_pred hccCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEEeeeCC------CCCCCH----------
Confidence 3568899999999999999999999999999999999999999999999999876532 346655
Q ss_pred cCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecC
Q 044553 147 LCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK 199 (275)
Q Consensus 147 ~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~ 199 (275)
+++..++.+++.. |++|+||||+..|+.+|+++|+..++.+..
T Consensus 153 ---------~~~~~~~~~~~~~-p~~~l~igDs~~di~aA~~aG~~~~~~v~~ 195 (224)
T PRK14988 153 ---------RLWQAVAEHTGLK-AERTLFIDDSEPILDAAAQFGIRYCLGVTN 195 (224)
T ss_pred ---------HHHHHHHHHcCCC-hHHEEEEcCCHHHHHHHHHcCCeEEEEEeC
Confidence 6777777777654 589999999999999999988865443333
No 30
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=99.86 E-value=1.9e-20 Score=154.09 Aligned_cols=174 Identities=18% Similarity=0.166 Sum_probs=121.1
Q ss_pred CceEEEEEcCCcccCCcc-HHHHHHHhCCChHHH----hh-cCCCChHHHHHHHHHHHHh--CCCCHHHHHHHHhcCCCC
Q 044553 2 SGIVVIFDFDKTIIDCDS-DNFVVDELGATDLFN----QL-LPTMPWNSLMDRMMKELHS--QGKTIEDIVEVLKRIPIH 73 (275)
Q Consensus 2 ~~~~viFD~DGTL~d~~~-~~~~~~~~g~~~~~~----~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 73 (275)
|+|+|+|||||||+++++ +.++...+|.+.... .. .+...+..........+.. .....+.+.....++.++
T Consensus 3 ~~k~viFD~DGTLid~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (201)
T TIGR01491 3 MIKLIIFDLDGTLTDVMSSWEYLHRRLETCGLAKKNAELFFSGRISYEEWARLDASLWKRRSGRLRREEVEEIFKEISLR 82 (201)
T ss_pred cceEEEEeCCCCCcCCccHHHHHHHHhCchHHHHHHHHHHHcCCCCHHHHHHHHHHHHhhcccCCCHHHHHHHHHhCCCC
Confidence 368999999999999765 555666677653221 12 2334445544433332222 123455677777889999
Q ss_pred CCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCc
Q 044553 74 PRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMC 153 (275)
Q Consensus 74 pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~ 153 (275)
||+.++|++|+++|++++|+||+....++.+++++|+..+|+..+..+ ..|.. +|.+.. . ....+
T Consensus 83 ~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~----~~g~~--~p~~~~--------~-~~~~~ 147 (201)
T TIGR01491 83 DYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFD----EKGFI--QPDGIV--------R-VTFDN 147 (201)
T ss_pred ccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEc----CCCeE--ecceee--------E-Ecccc
Confidence 999999999999999999999999999999999999987766554332 12222 232210 0 01124
Q ss_pred hHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCC
Q 044553 154 KGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 154 K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
|..++++++.+++.. +++++|||||.+|+.++..+|.
T Consensus 148 k~~~~~~~~~~~~~~-~~~~i~iGDs~~D~~~a~~ag~ 184 (201)
T TIGR01491 148 KGEAVERLKRELNPS-LTETVAVGDSKNDLPMFEVADI 184 (201)
T ss_pred HHHHHHHHHHHhCCC-HHHEEEEcCCHhHHHHHHhcCC
Confidence 788999988877654 5799999999999999977665
No 31
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=99.86 E-value=4.7e-21 Score=160.31 Aligned_cols=169 Identities=14% Similarity=0.139 Sum_probs=120.0
Q ss_pred CceEEEEEcCCcccCCcc-----HHHHHHHhCCChHHH---hhcCCCChHHHHHHHHHHHHhCCCCHHHHHHH-------
Q 044553 2 SGIVVIFDFDKTIIDCDS-----DNFVVDELGATDLFN---QLLPTMPWNSLMDRMMKELHSQGKTIEDIVEV------- 66 (275)
Q Consensus 2 ~~~~viFD~DGTL~d~~~-----~~~~~~~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 66 (275)
.+++|+||+||||+|+.. +..+++.+|.+.... ....+......+..+..... ...+.+++...
T Consensus 3 ~~~~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 81 (221)
T PRK10563 3 QIEAVFFDCDGTLVDSEVICSRAYVTMFAEFGITLSLEEVFKRFKGVKLYEIIDIISKEHG-VTLAKAELEPVYRAEVAR 81 (221)
T ss_pred CCCEEEECCCCCCCCChHHHHHHHHHHHHHcCCCCCHHHHHHHhcCCCHHHHHHHHHHHhC-CCCCHHHHHHHHHHHHHH
Confidence 479999999999999865 355677788753222 22233344445555554432 22233333221
Q ss_pred --HhcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcc-eEecCCCccCCCCceeecccCCCCCCCC
Q 044553 67 --LKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFS-EINTNPGFVDEEGRLRIFPFHDFTKCSH 143 (275)
Q Consensus 67 --~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd-~i~~~~~~~~~~g~~~~kp~~~~~~~~~ 143 (275)
.....++||+.++|+.|+ ++++|+||+....+...++++|+.++|+ .+++++... ..||+|
T Consensus 82 ~~~~~~~~~~gv~~~L~~L~---~~~~ivTn~~~~~~~~~l~~~~l~~~F~~~v~~~~~~~------~~KP~p------- 145 (221)
T PRK10563 82 LFDSELEPIAGANALLESIT---VPMCVVSNGPVSKMQHSLGKTGMLHYFPDKLFSGYDIQ------RWKPDP------- 145 (221)
T ss_pred HHHccCCcCCCHHHHHHHcC---CCEEEEeCCcHHHHHHHHHhcChHHhCcceEeeHHhcC------CCCCCh-------
Confidence 134789999999999993 9999999999999999999999999996 566654321 347755
Q ss_pred CCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCC
Q 044553 144 GCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKN 200 (275)
Q Consensus 144 ~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~ 200 (275)
+++..++..++.. |++|+||||+.+|+.+|+++|...+++..++
T Consensus 146 ------------~~~~~a~~~~~~~-p~~~l~igDs~~di~aA~~aG~~~i~~~~~~ 189 (221)
T PRK10563 146 ------------ALMFHAAEAMNVN-VENCILVDDSSAGAQSGIAAGMEVFYFCADP 189 (221)
T ss_pred ------------HHHHHHHHHcCCC-HHHeEEEeCcHhhHHHHHHCCCEEEEECCCC
Confidence 6777788877765 5899999999999999999998766554333
No 32
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=99.86 E-value=7.8e-21 Score=158.83 Aligned_cols=172 Identities=20% Similarity=0.187 Sum_probs=124.3
Q ss_pred ceEEEEEcCCcccCCcc-----HHHHHHHhCCChH---HHhhcCCCChHHHHHHHHHHHHhCC-CCHHH--------HHH
Q 044553 3 GIVVIFDFDKTIIDCDS-----DNFVVDELGATDL---FNQLLPTMPWNSLMDRMMKELHSQG-KTIED--------IVE 65 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~-----~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--------~~~ 65 (275)
.++|||||||||+||+. +..+++++|+... .....+...+ .....+........ ..... ...
T Consensus 2 ~~avIFD~DGvLvDse~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (221)
T COG0637 2 IKAVIFDMDGTLVDSEPLHARAWLEALKEYGIEISDEEIRELHGGGIA-RIIDLLRKLAAGEDPADLAELERLLYEAEAL 80 (221)
T ss_pred CcEEEEcCCCCcCcchHHHHHHHHHHHHHcCCCCCHHHHHHHHCCChH-HHHHHHHHHhcCCcccCHHHHHHHHHHHHHh
Confidence 58999999999999976 3667888887632 2233232222 22222222222111 11111 112
Q ss_pred HHhcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCC
Q 044553 66 VLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGC 145 (275)
Q Consensus 66 ~~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~ 145 (275)
......+.||+.++|+.|+++|++++++|+++...++..++.+|+.++|+.+++++... ++||+|+
T Consensus 81 ~~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~~v~~~dv~------~~KP~Pd-------- 146 (221)
T COG0637 81 ELEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDVIVTADDVA------RGKPAPD-------- 146 (221)
T ss_pred hhcCCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcchhccHHHHh------cCCCCCH--------
Confidence 34558999999999999999999999999999999999999999999999998877654 5699985
Q ss_pred CcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCch
Q 044553 146 NLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFP 202 (275)
Q Consensus 146 ~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~ 202 (275)
++.....+++.. |++|+.|+||.+++.+|+++|+..+++.. +++
T Consensus 147 -----------~yL~Aa~~Lgv~-P~~CvviEDs~~Gi~Aa~aAGm~vv~v~~-~~~ 190 (221)
T COG0637 147 -----------IYLLAAERLGVD-PEECVVVEDSPAGIQAAKAAGMRVVGVPA-GHD 190 (221)
T ss_pred -----------HHHHHHHHcCCC-hHHeEEEecchhHHHHHHHCCCEEEEecC-CCC
Confidence 233334444433 68999999999999999999998888876 443
No 33
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.85 E-value=5.1e-20 Score=151.62 Aligned_cols=197 Identities=15% Similarity=0.170 Sum_probs=135.3
Q ss_pred eEEEEEcCCcccCCccHHHHHHHhCCChHHHhhcCCCChHHHHHHHHHHHHhCCCCHHHHHHHHhcCCCCCCHHHHHHHH
Q 044553 4 IVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTIEDIVEVLKRIPIHPRVVPAIKSA 83 (275)
Q Consensus 4 ~~viFD~DGTL~d~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L 83 (275)
++++||+||||++. .+..++...|.............+..+.+.-+..+...+.+.+.+.+....++++||+.++|++|
T Consensus 2 ~la~FDlD~TLi~~-~w~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~~ll~~~g~~~~~i~~~~~~i~l~pga~ell~~l 80 (203)
T TIGR02137 2 EIACLDLEGVLVPE-IWIAFAEKTGIDALKATTRDIPDYDVLMKQRLRILDEHGLKLGDIQEVIATLKPLEGAVEFVDWL 80 (203)
T ss_pred eEEEEeCCcccHHH-HHHHHHHHcCCcHHHHHhcCCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHhCCCCccHHHHHHHH
Confidence 57999999999986 57788888886543322222334455555444444434788889988888899999999999999
Q ss_pred HHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchHHHHHHHHH
Q 044553 84 HALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQA 163 (275)
Q Consensus 84 ~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~l~~~~~ 163 (275)
++++ +++|+|++...+++.+++++|++.+|. ++..++.+|.+++.... ...+|...++.+..
T Consensus 81 k~~~-~~~IVS~~~~~~~~~il~~lgi~~~~a----n~l~~~~~g~~tG~~~~-------------~~~~K~~~l~~l~~ 142 (203)
T TIGR02137 81 RERF-QVVILSDTFYEFSQPLMRQLGFPTLLC----HKLEIDDSDRVVGYQLR-------------QKDPKRQSVIAFKS 142 (203)
T ss_pred HhCC-eEEEEeCChHHHHHHHHHHcCCchhhc----eeeEEecCCeeECeeec-------------CcchHHHHHHHHHh
Confidence 9975 999999999999999999999975554 33223221333332111 01248888888743
Q ss_pred hhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHHHHHHHHH
Q 044553 164 SLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQILLHL 234 (275)
Q Consensus 164 ~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el~~~l~~~ 234 (275)
. ..++++||||.||+.++..++. ++++... + .....-+..+ .+.+.+||+..+.+.
T Consensus 143 ~-----~~~~v~vGDs~nDl~ml~~Ag~-~ia~~ak--~--~~~~~~~~~~-----~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 143 L-----YYRVIAAGDSYNDTTMLSEAHA-GILFHAP--E--NVIREFPQFP-----AVHTYEDLKREFLKA 198 (203)
T ss_pred h-----CCCEEEEeCCHHHHHHHHhCCC-CEEecCC--H--HHHHhCCCCC-----cccCHHHHHHHHHHH
Confidence 2 2489999999999999877554 4444322 1 2223333333 578899998887754
No 34
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=99.85 E-value=1.5e-20 Score=152.80 Aligned_cols=163 Identities=19% Similarity=0.212 Sum_probs=114.2
Q ss_pred ceEEEEEcCCcccCCccH-----HHHHHHhCCChH--HHhhcCCCChHHHHHHHHHHHHhCCCCHHHH-----------H
Q 044553 3 GIVVIFDFDKTIIDCDSD-----NFVVDELGATDL--FNQLLPTMPWNSLMDRMMKELHSQGKTIEDI-----------V 64 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~~-----~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~ 64 (275)
+++|+||+||||+|+... ..+++++|.+.. ......+......+...+.... .+.+.+++ .
T Consensus 1 ~~~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 79 (185)
T TIGR02009 1 YKAVIFDMDGVIVDTAPLHAQAWKHLADKYGIEFDKQYNTSLGGLSREDILRAILKLRK-PGLSLETIHQLAERKNELYR 79 (185)
T ss_pred CCeEEEcCCCcccCChHHHHHHHHHHHHHcCCCCCHHHHHHcCCCCHHHHHHHHHHhcC-CCCCHHHHHHHHHHHHHHHH
Confidence 478999999999999753 557777887521 1222233333444444433221 12222221 1
Q ss_pred HHH--hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCC
Q 044553 65 EVL--KRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCS 142 (275)
Q Consensus 65 ~~~--~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~ 142 (275)
+.. ....++||+.++|+.|+++|++++|+||+ ..++.+++++|+.++|+.+++++... ..||.|
T Consensus 80 ~~~~~~~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~~~~~~~------~~kp~~------ 145 (185)
T TIGR02009 80 ELLRLTGAEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAIVDADEVK------EGKPHP------ 145 (185)
T ss_pred HHHhccCCCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEeeehhhCC------CCCCCh------
Confidence 112 23789999999999999999999999998 67899999999999999998765421 245544
Q ss_pred CCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCe
Q 044553 143 HGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDH 194 (275)
Q Consensus 143 ~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~ 194 (275)
.+++.++.+++.. +++++||||+.+|+.+|+++|+..+
T Consensus 146 -------------~~~~~~~~~~~~~-~~~~v~IgD~~~di~aA~~~G~~~i 183 (185)
T TIGR02009 146 -------------ETFLLAAELLGVS-PNECVVFEDALAGVQAARAAGMFAV 183 (185)
T ss_pred -------------HHHHHHHHHcCCC-HHHeEEEeCcHhhHHHHHHCCCeEe
Confidence 5667777777654 5899999999999999988877543
No 35
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=99.85 E-value=1.1e-20 Score=174.27 Aligned_cols=193 Identities=16% Similarity=0.147 Sum_probs=127.7
Q ss_pred CceEEEEEcCCcccCCcc-----HHHHHHHhCC------C---hHHHhhcCCCChHHHHHHHHHHHHhCCCCHHH----H
Q 044553 2 SGIVVIFDFDKTIIDCDS-----DNFVVDELGA------T---DLFNQLLPTMPWNSLMDRMMKELHSQGKTIED----I 63 (275)
Q Consensus 2 ~~~~viFD~DGTL~d~~~-----~~~~~~~~g~------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 63 (275)
|+++|+|||||||+|+.. +..++++++. . ...... .+......++.++..... . ..++ +
T Consensus 240 m~k~vIFDlDGTLiDs~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~-~G~~~~~~~~~l~~~~~~-~-~~~~~~~~~ 316 (459)
T PRK06698 240 MLQALIFDMDGTLFQTDKILELSLDDTFDHLRSLQLWDTVTPIDKYREI-MGVPLPKVWEALLPDHSL-E-IREQTDAYF 316 (459)
T ss_pred hhhheeEccCCceecchhHHHHHHHHHHHHHhhhcccCCCCCHHHHHHH-cCCChHHHHHHHhhhcch-h-HHHHHHHHH
Confidence 458999999999999976 3556666631 1 111122 223334444443332110 0 0111 1
Q ss_pred HH----HH--hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCC
Q 044553 64 VE----VL--KRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHD 137 (275)
Q Consensus 64 ~~----~~--~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~ 137 (275)
.+ .. ...+++||+.++|++|+++|++++|+||+....++.+++++|+..+|+.+++.+.. ..||.
T Consensus 317 ~~~~~~~~~~~~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~~d~v-------~~~~k-- 387 (459)
T PRK06698 317 LERLIENIKSGKGALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFSIEQI-------NSLNK-- 387 (459)
T ss_pred HHHhHHHHhhcCCCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEecCCC-------CCCCC--
Confidence 11 11 24689999999999999999999999999999999999999999999999987653 11332
Q ss_pred CCCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEE
Q 044553 138 FTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAE 217 (275)
Q Consensus 138 ~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 217 (275)
+..+...+.++ ++++|+||||+.+|+.+|+++|...+++........++ . .+
T Consensus 388 -----------------P~~~~~al~~l---~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~--~-----~~- 439 (459)
T PRK06698 388 -----------------SDLVKSILNKY---DIKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDEL--A-----QA- 439 (459)
T ss_pred -----------------cHHHHHHHHhc---CcceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCccccc--C-----CC-
Confidence 24455555544 25799999999999999999998777665432211111 1 12
Q ss_pred EeeCCChHHHHHHHHHH
Q 044553 218 IHEWTDGEELEQILLHL 234 (275)
Q Consensus 218 ~~~~~~~~el~~~l~~~ 234 (275)
...++++.||..++..+
T Consensus 440 d~~i~~l~el~~~l~~~ 456 (459)
T PRK06698 440 DIVIDDLLELKGILSTV 456 (459)
T ss_pred CEEeCCHHHHHHHHHHH
Confidence 23579999998877543
No 36
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=99.85 E-value=1.5e-20 Score=152.68 Aligned_cols=162 Identities=20% Similarity=0.190 Sum_probs=112.6
Q ss_pred EEEEEcCCcccCCcc-----HHHHHHHhCCChHH--HhhcCCCChHHHHHHHHHHHHhCCCCHHH-----------HHHH
Q 044553 5 VVIFDFDKTIIDCDS-----DNFVVDELGATDLF--NQLLPTMPWNSLMDRMMKELHSQGKTIED-----------IVEV 66 (275)
Q Consensus 5 ~viFD~DGTL~d~~~-----~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~ 66 (275)
+|+|||||||+|+.. +..+++.+|++... .....+......++..+.... ...+.+. +.+.
T Consensus 1 ~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 79 (185)
T TIGR01990 1 AVIFDLDGVITDTAEYHYLAWKALADELGIPFDEEFNESLKGVSREDSLERILDLGG-KKYSEEEKEELAERKNDYYVEL 79 (185)
T ss_pred CeEEcCCCccccChHHHHHHHHHHHHHcCCCCCHHHHHHhcCCChHHHHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHH
Confidence 489999999999975 35677788876221 122233344444444443321 1222221 1111
Q ss_pred H---hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCC
Q 044553 67 L---KRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSH 143 (275)
Q Consensus 67 ~---~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~ 143 (275)
. ....++||+.++|++|+++|++++|+||+.. ....++++|+..+|+.+++++... ..||.|
T Consensus 80 ~~~~~~~~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f~~~~~~~~~~------~~kp~p------- 144 (185)
T TIGR01990 80 LKELTPADVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYFDAIVDPAEIK------KGKPDP------- 144 (185)
T ss_pred HHhcCCcccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhCcEEEehhhcC------CCCCCh-------
Confidence 1 1247899999999999999999999998743 467899999999999998766431 346644
Q ss_pred CCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeE
Q 044553 144 GCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHV 195 (275)
Q Consensus 144 ~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~ 195 (275)
++++..+.+++.. +++|+||||+.+|+.+|+.+|+..++
T Consensus 145 ------------~~~~~~~~~~~~~-~~~~v~vgD~~~di~aA~~aG~~~i~ 183 (185)
T TIGR01990 145 ------------EIFLAAAEGLGVS-PSECIGIEDAQAGIEAIKAAGMFAVG 183 (185)
T ss_pred ------------HHHHHHHHHcCCC-HHHeEEEecCHHHHHHHHHcCCEEEe
Confidence 6777777777654 58999999999999999988876554
No 37
>PLN02940 riboflavin kinase
Probab=99.84 E-value=1.2e-20 Score=169.62 Aligned_cols=169 Identities=15% Similarity=0.114 Sum_probs=123.3
Q ss_pred ceEEEEEcCCcccCCcc-----HHHHHHHhCCChHHHhh--cCCCChHHHHHHHHHHHHhCCCCHHHH--------HHHH
Q 044553 3 GIVVIFDFDKTIIDCDS-----DNFVVDELGATDLFNQL--LPTMPWNSLMDRMMKELHSQGKTIEDI--------VEVL 67 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~-----~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~ 67 (275)
+++|+||+||||+|+.. +..+++++|.+...... ..+......+..++..... ....+++ .+..
T Consensus 11 ik~VIFDlDGTLvDt~~~~~~a~~~~~~~~G~~~~~~~~~~~~G~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 89 (382)
T PLN02940 11 VSHVILDLDGTLLNTDGIVSDVLKAFLVKYGKQWDGREAQKIVGKTPLEAAATVVEDYGL-PCSTDEFNSEITPLLSEQW 89 (382)
T ss_pred CCEEEECCcCcCCcCHHHHHHHHHHHHHHcCCCCCHHHHHHhcCCCHHHHHHHHHHHhCC-CCCHHHHHHHHHHHHHHHH
Confidence 57899999999999965 35577788875322222 1123334444444443321 2222221 2233
Q ss_pred hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHH-HcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCC
Q 044553 68 KRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILE-HLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCN 146 (275)
Q Consensus 68 ~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~-~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~ 146 (275)
.+..++||+.++|+.|+++|++++|+||++...+...++ +.|+.++|+.|++++... ..||+|
T Consensus 90 ~~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~------~~KP~p---------- 153 (382)
T PLN02940 90 CNIKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEVE------KGKPSP---------- 153 (382)
T ss_pred ccCCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhcC------CCCCCH----------
Confidence 467899999999999999999999999999999999887 689999999999877642 347755
Q ss_pred cCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeec
Q 044553 147 LCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPR 198 (275)
Q Consensus 147 ~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~ 198 (275)
+++..++.+++.. +++|+||||+.+|+.+|+++|...+++..
T Consensus 154 ---------~~~~~a~~~lgv~-p~~~l~VGDs~~Di~aA~~aGi~~I~v~~ 195 (382)
T PLN02940 154 ---------DIFLEAAKRLNVE-PSNCLVIEDSLPGVMAGKAAGMEVIAVPS 195 (382)
T ss_pred ---------HHHHHHHHHcCCC-hhHEEEEeCCHHHHHHHHHcCCEEEEECC
Confidence 6777777777655 58999999999999999999987666654
No 38
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=99.84 E-value=2.9e-20 Score=151.56 Aligned_cols=165 Identities=15% Similarity=0.163 Sum_probs=116.1
Q ss_pred ceEEEEEcCCcccCCcc-----HHHHHHHhCCChHHHhh--cCCCChHHHHHHHHHHHHhCCCCHHHHHH--------H-
Q 044553 3 GIVVIFDFDKTIIDCDS-----DNFVVDELGATDLFNQL--LPTMPWNSLMDRMMKELHSQGKTIEDIVE--------V- 66 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~-----~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~- 66 (275)
.++|+|||||||+|+.. +..+++++|.+...... ..+.........++.... .....+++.. .
T Consensus 5 ~~~viFD~DGTLiDs~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 83 (188)
T PRK10725 5 YAGLIFDMDGTILDTEPTHRKAWREVLGRYGLQFDEQAMVALNGSPTWRIAQAIIELNQ-ADLDPHALAREKTEAVKSML 83 (188)
T ss_pred ceEEEEcCCCcCccCHHHHHHHHHHHHHHcCCCCCHHHHHHhcCCCHHHHHHHHHHHhC-CCCCHHHHHHHHHHHHHHHH
Confidence 68999999999999964 36677788875321111 122222333343333221 1223332221 1
Q ss_pred HhcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCC
Q 044553 67 LKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCN 146 (275)
Q Consensus 67 ~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~ 146 (275)
.....++|+ .++|..|++. ++++|+||++...++..++++|+.++|+.|++++... ..||.|
T Consensus 84 ~~~~~~~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i~~~~~~~------~~KP~p---------- 145 (188)
T PRK10725 84 LDSVEPLPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADDVQ------HHKPAP---------- 145 (188)
T ss_pred hccCCCccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHceEEEehhhcc------CCCCCh----------
Confidence 234678885 6999999875 8999999999999999999999999999999877532 346655
Q ss_pred cCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEe
Q 044553 147 LCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVM 196 (275)
Q Consensus 147 ~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~ 196 (275)
+.+..+..+++.. +++|+||||+.+|+.+|+++|...+.+
T Consensus 146 ---------~~~~~~~~~~~~~-~~~~l~igDs~~di~aA~~aG~~~i~~ 185 (188)
T PRK10725 146 ---------DTFLRCAQLMGVQ-PTQCVVFEDADFGIQAARAAGMDAVDV 185 (188)
T ss_pred ---------HHHHHHHHHcCCC-HHHeEEEeccHhhHHHHHHCCCEEEee
Confidence 6777888777665 589999999999999999888765543
No 39
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=99.84 E-value=5.2e-20 Score=154.02 Aligned_cols=128 Identities=16% Similarity=0.098 Sum_probs=99.9
Q ss_pred cCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcC
Q 044553 69 RIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLC 148 (275)
Q Consensus 69 ~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~ 148 (275)
...++||+.++|++|+++ ++++|+||+....+...++++|+..+|+.+++++... ..||.|
T Consensus 95 ~~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~~~~~------~~KP~~------------ 155 (224)
T TIGR02254 95 GHQLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVSEDAG------IQKPDK------------ 155 (224)
T ss_pred cCeeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEcCccC------CCCCCH------------
Confidence 368999999999999999 9999999999999999999999999999999876431 346644
Q ss_pred CCCCchHHHHHHHHHhh-hcCCCCeEEEEcCCC-CCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHH
Q 044553 149 PPNMCKGVVIERIQASL-SKEGNKKIIYLGDGS-GDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEE 226 (275)
Q Consensus 149 ~~~~~K~~~l~~~~~~~-~~~~~~~~i~vGDs~-~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~e 226 (275)
.+++.++..+ +.. |++++||||+. +|+.+|+++|+..+++.+++.+. .. . ..+ .+.++++.|
T Consensus 156 -------~~~~~~~~~~~~~~-~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~--~~-~----~~~-~~~~~~~~e 219 (224)
T TIGR02254 156 -------EIFNYALERMPKFS-KEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPN--PD-D----IIP-TYEIRSLEE 219 (224)
T ss_pred -------HHHHHHHHHhcCCC-chheEEECCCcHHHHHHHHHCCCcEEEECCCCCCC--CC-C----CCC-ceEECCHHH
Confidence 6777777777 554 58999999998 79999999999888776543321 11 1 112 346789999
Q ss_pred HHHHH
Q 044553 227 LEQIL 231 (275)
Q Consensus 227 l~~~l 231 (275)
|..+|
T Consensus 220 l~~~~ 224 (224)
T TIGR02254 220 LYEIL 224 (224)
T ss_pred HHhhC
Confidence 88653
No 40
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=99.83 E-value=4.1e-20 Score=152.60 Aligned_cols=164 Identities=14% Similarity=0.186 Sum_probs=110.3
Q ss_pred eEEEEEcCCcccCCcc-----HHHHHHHhCCChHHHh---h--------------c---CCCChHHHHHHHHHHH-HhCC
Q 044553 4 IVVIFDFDKTIIDCDS-----DNFVVDELGATDLFNQ---L--------------L---PTMPWNSLMDRMMKEL-HSQG 57 (275)
Q Consensus 4 ~~viFD~DGTL~d~~~-----~~~~~~~~g~~~~~~~---~--------------~---~~~~~~~~~~~~~~~~-~~~~ 57 (275)
++|+||+||||+|+.. +..+++++|.+....+ . . .+..........+... ...+
T Consensus 1 k~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 80 (203)
T TIGR02252 1 KLITFDAVGTLLALKEPVGEVYCEIARKYGVEVSPDELEQAFRRAFKAMSEAFPNFGFSSGLTPQQWWQKLVRDTFGRAG 80 (203)
T ss_pred CeEEEecCCceeeeCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCCHHHHHHHHHHHHHHhcC
Confidence 5899999999999854 3567778887621110 0 0 0222222222222221 1111
Q ss_pred -CC---HHH-HHHHH------hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCC
Q 044553 58 -KT---IED-IVEVL------KRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDE 126 (275)
Q Consensus 58 -~~---~~~-~~~~~------~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~ 126 (275)
.. ..+ +.... ....++||+.++|+.|+++|++++|+||+... +...++++|+..+|+.|++++..-
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~i~~s~~~~-- 157 (203)
T TIGR02252 81 VPDPESFEKIFEELYSYFATPEPWQVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDFVVTSYEVG-- 157 (203)
T ss_pred CCCchhHHHHHHHHHHHhcCCCcceeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcceEEeecccC--
Confidence 11 111 22222 12468999999999999999999999998765 578899999999999998766431
Q ss_pred CCceeecccCCCCCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCC-CCcccccccCCCCe
Q 044553 127 EGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGS-GDYCPSLKLSEGDH 194 (275)
Q Consensus 127 ~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~~~~~~ 194 (275)
..||.| +.+..++..++.. |++++||||+. +|+.+|+++|+..+
T Consensus 158 ----~~KP~~-------------------~~~~~~~~~~~~~-~~~~~~IgD~~~~Di~~A~~aG~~~i 202 (203)
T TIGR02252 158 ----AEKPDP-------------------KIFQEALERAGIS-PEEALHIGDSLRNDYQGARAAGWRAL 202 (203)
T ss_pred ----CCCCCH-------------------HHHHHHHHHcCCC-hhHEEEECCCchHHHHHHHHcCCeee
Confidence 346655 6677777777654 58999999997 89999988887644
No 41
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.81 E-value=1.1e-18 Score=153.02 Aligned_cols=175 Identities=15% Similarity=0.224 Sum_probs=127.7
Q ss_pred ceEEEEEcCCcccCCccHHHHHHHhCCChHHH----hh-cCCCChHHHHHHHHHHHHhCCCCHHHHHHHHhcCCCCCCHH
Q 044553 3 GIVVIFDFDKTIIDCDSDNFVVDELGATDLFN----QL-LPTMPWNSLMDRMMKELHSQGKTIEDIVEVLKRIPIHPRVV 77 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~~~~~~~~~g~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~ 77 (275)
.++|+|||||||+..+.+..+++.+|.+.... .. .+...+.+.+...+..+ .+...+.+....+.++++||+.
T Consensus 110 ~~LvvfDmDGTLI~~e~i~eia~~~g~~~~v~~it~~~m~Geldf~esl~~rv~~l--~g~~~~il~~v~~~l~l~pGa~ 187 (322)
T PRK11133 110 PGLLVMDMDSTAIQIECIDEIAKLAGTGEEVAEVTERAMRGELDFEASLRQRVATL--KGADANILQQVRENLPLMPGLT 187 (322)
T ss_pred CCEEEEECCCCCcchHHHHHHHHHhCCchHHHHHHHHHHcCCcCHHHHHHHHHHHh--CCCCHHHHHHHHHhCCCChhHH
Confidence 58999999999999999999999998864432 12 23445565555544433 2334444566667899999999
Q ss_pred HHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchHHH
Q 044553 78 PAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVV 157 (275)
Q Consensus 78 e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~ 157 (275)
++|++|+++|++++|+|++...+++.+++++|++. ++++...+ .+|.+.++...+ +..+.+|.+.
T Consensus 188 elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~----~~an~lei-~dg~ltg~v~g~----------iv~~k~K~~~ 252 (322)
T PRK11133 188 ELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDA----AVANELEI-MDGKLTGNVLGD----------IVDAQYKADT 252 (322)
T ss_pred HHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCe----EEEeEEEE-ECCEEEeEecCc----------cCCcccHHHH
Confidence 99999999999999999999999999999999854 33333222 245554442221 0123569999
Q ss_pred HHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEe
Q 044553 158 IERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVM 196 (275)
Q Consensus 158 l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~ 196 (275)
+++++.+++.. +++|++||||.||+.++..+|. ++++
T Consensus 253 L~~la~~lgi~-~~qtIaVGDg~NDl~m~~~AGl-giA~ 289 (322)
T PRK11133 253 LTRLAQEYEIP-LAQTVAIGDGANDLPMIKAAGL-GIAY 289 (322)
T ss_pred HHHHHHHcCCC-hhhEEEEECCHHHHHHHHHCCC-eEEe
Confidence 99999998865 5899999999999999977665 4444
No 42
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=99.81 E-value=2.4e-19 Score=144.61 Aligned_cols=167 Identities=27% Similarity=0.338 Sum_probs=115.0
Q ss_pred EEEEEcCCcccCCccHHHHHH-HhCCChHH----Hhhc-CCCChHHHHHHHHHHHHhCCCCHHHHHH-H-HhcCCCCCCH
Q 044553 5 VVIFDFDKTIIDCDSDNFVVD-ELGATDLF----NQLL-PTMPWNSLMDRMMKELHSQGKTIEDIVE-V-LKRIPIHPRV 76 (275)
Q Consensus 5 ~viFD~DGTL~d~~~~~~~~~-~~g~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~pg~ 76 (275)
+++|||||||++.++...+++ ..+..+.. .... +...+.+.+...+..+. +...+++.+ . .+.+.++||+
T Consensus 1 l~~fD~DgTl~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~ 78 (177)
T TIGR01488 1 LAIFDFDGTLTRQDSLIDLLAKLLGTNDEVIELTRLAPSGRISFEDALGRRLALLH--RSRSEEVAKEFLARQVALRPGA 78 (177)
T ss_pred CEEecCccccccchhhHHHHHHHhCChHHHHHHHHHHHCCCCCHHHHHHHHHHHhC--CCCHHHHHHHHHHhcCCcCcCH
Confidence 489999999999998554444 44442222 1222 23344555554444442 233345544 4 4568899999
Q ss_pred HHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchHH
Q 044553 77 VPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGV 156 (275)
Q Consensus 77 ~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~ 156 (275)
.++++.++++|++++|+|++...+++.+++++|+..+ +++...++.+|...+++... .|+.+.+|..
T Consensus 79 ~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~----~~~~~~~~~~g~~~g~~~~~---------~~~~~~~K~~ 145 (177)
T TIGR01488 79 RELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDV----FANRLEFDDNGLLTGPIEGQ---------VNPEGECKGK 145 (177)
T ss_pred HHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchh----eeeeEEECCCCEEeCccCCc---------ccCCcchHHH
Confidence 9999999999999999999999999999999998754 44444444455544433220 1234577999
Q ss_pred HHHHHHHhhhcCCCCeEEEEcCCCCCccccc
Q 044553 157 VIERIQASLSKEGNKKIIYLGDGSGDYCPSL 187 (275)
Q Consensus 157 ~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~ 187 (275)
+++++..+.+.. +++++|||||.+|++++.
T Consensus 146 ~l~~~~~~~~~~-~~~~~~iGDs~~D~~~~~ 175 (177)
T TIGR01488 146 VLKELLEESKIT-LKKIIAVGDSVNDLPMLK 175 (177)
T ss_pred HHHHHHHHhCCC-HHHEEEEeCCHHHHHHHh
Confidence 999998876554 478999999999998874
No 43
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=99.81 E-value=1.4e-19 Score=147.18 Aligned_cols=163 Identities=15% Similarity=0.195 Sum_probs=107.5
Q ss_pred EEEEEcCCcccCCccH-----HHH-----HHHhCCChHHHhhcCCCCh---HHHHHHHHHHHHhCCCCHHHHHHHHh---
Q 044553 5 VVIFDFDKTIIDCDSD-----NFV-----VDELGATDLFNQLLPTMPW---NSLMDRMMKELHSQGKTIEDIVEVLK--- 68 (275)
Q Consensus 5 ~viFD~DGTL~d~~~~-----~~~-----~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~--- 68 (275)
+|+||+||||+|+... ... .+.+|++......+....+ ...+..+... .....+++.+.+.
T Consensus 2 ~viFDlDGTL~ds~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~ 78 (184)
T TIGR01993 2 VWFFDLDNTLYPHSAGIFLQIDRNITEFVAARLKLSEEEARVLRKDYYREYGTTLAGLMIL---HEIDADEYLRYVHGRL 78 (184)
T ss_pred eEEEeCCCCCCCCcccHHHHHHHHHHHHHHHHcCcCHHHHHHHHHHHHHHHchHHHHHHHh---hCCCHHHHHHHHhccC
Confidence 7999999999999542 222 2355665332211110000 0111111111 1233444443332
Q ss_pred ---cCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCC
Q 044553 69 ---RIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGC 145 (275)
Q Consensus 69 ---~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~ 145 (275)
...++||+.++|++|+ ++++|+||++...+...++++|+.++|+.|++++.... +....||.|
T Consensus 79 ~~~~~~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~--~~~~~KP~p--------- 144 (184)
T TIGR01993 79 PYEKLKPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCFDGIFCFDTANP--DYLLPKPSP--------- 144 (184)
T ss_pred CHHhCCCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEeecccC--ccCCCCCCH---------
Confidence 3678999999999998 58999999999999999999999999999998765320 000125544
Q ss_pred CcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeE
Q 044553 146 NLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHV 195 (275)
Q Consensus 146 ~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~ 195 (275)
+.++.++.+++.. |++++||||+..|+.+|+++|...++
T Consensus 145 ----------~~~~~~~~~~~~~-~~~~l~vgD~~~di~aA~~~G~~~i~ 183 (184)
T TIGR01993 145 ----------QAYEKALREAGVD-PERAIFFDDSARNIAAAKALGMKTVL 183 (184)
T ss_pred ----------HHHHHHHHHhCCC-ccceEEEeCCHHHHHHHHHcCCEEee
Confidence 6777777777655 58999999999999999988876543
No 44
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=99.81 E-value=2.3e-19 Score=151.85 Aligned_cols=128 Identities=16% Similarity=0.148 Sum_probs=93.1
Q ss_pred hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCc
Q 044553 68 KRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNL 147 (275)
Q Consensus 68 ~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~ 147 (275)
..+.++||+.++|+.|++. ++++|+||++.. +++.|+.++|+.|++++... ..||.|
T Consensus 110 ~~~~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~fd~i~~~~~~~------~~KP~p----------- 166 (238)
T PRK10748 110 SRIDVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDYFEFVLRAGPHG------RSKPFS----------- 166 (238)
T ss_pred hcCCCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHhhceeEecccCC------cCCCcH-----------
Confidence 4588999999999999975 999999998764 47889999999999876531 346654
Q ss_pred CCCCCchHHHHHHHHHhhhcCCCCeEEEEcCC-CCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHH
Q 044553 148 CPPNMCKGVVIERIQASLSKEGNKKIIYLGDG-SGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEE 226 (275)
Q Consensus 148 ~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs-~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~e 226 (275)
.++..++.+++.. +++|+||||+ .+|+.+|+++|+..+++.+.+.+. ....+....+ ....+++.|
T Consensus 167 --------~~~~~a~~~~~~~-~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~---~~~~~~~~~p-~~~i~~l~e 233 (238)
T PRK10748 167 --------DMYHLAAEKLNVP-IGEILHVGDDLTTDVAGAIRCGMQACWINPENGDL---MQTWDSRLLP-HIEISRLAS 233 (238)
T ss_pred --------HHHHHHHHHcCCC-hhHEEEEcCCcHHHHHHHHHCCCeEEEEcCCCccc---cccccccCCC-CEEECCHHH
Confidence 6777777776654 5899999999 599999999999888776654321 1111110111 235788888
Q ss_pred HHHHH
Q 044553 227 LEQIL 231 (275)
Q Consensus 227 l~~~l 231 (275)
|.++|
T Consensus 234 l~~~~ 238 (238)
T PRK10748 234 LTSLI 238 (238)
T ss_pred HHhhC
Confidence 87653
No 45
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.80 E-value=1.3e-18 Score=146.00 Aligned_cols=130 Identities=21% Similarity=0.217 Sum_probs=104.8
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCP 149 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~ 149 (275)
.+++|++.++|+.|+.+ ++++|+||+....+...++++|+.++||.|++++.. | ..||+|
T Consensus 98 ~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~~s~~~----g--~~KP~~------------- 157 (229)
T COG1011 98 LPDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDYFDAVFISEDV----G--VAKPDP------------- 157 (229)
T ss_pred CccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhhhheEEEeccc----c--cCCCCc-------------
Confidence 89999999999999999 999999999999999999999999999999987753 1 457766
Q ss_pred CCCchHHHHHHHHHhhhcCCCCeEEEEcCC-CCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHHH
Q 044553 150 PNMCKGVVIERIQASLSKEGNKKIIYLGDG-SGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELE 228 (275)
Q Consensus 150 ~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs-~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el~ 228 (275)
++++.++...+.. |++++||||+ .+||.+|+++|+..+++.+.+... ......+ .....++.++.
T Consensus 158 ------~~f~~~~~~~g~~-p~~~l~VgD~~~~di~gA~~~G~~~vwi~~~~~~~----~~~~~~~---~~~i~~l~~l~ 223 (229)
T COG1011 158 ------EIFEYALEKLGVP-PEEALFVGDSLENDILGARALGMKTVWINRGGKPL----PDALEAP---DYEISSLAELL 223 (229)
T ss_pred ------HHHHHHHHHcCCC-cceEEEECCChhhhhHHHHhcCcEEEEECCCCCCC----CCCccCC---ceEEcCHHHHH
Confidence 7888888888766 5899999999 678899999999999888765432 0111112 33578888888
Q ss_pred HHHHH
Q 044553 229 QILLH 233 (275)
Q Consensus 229 ~~l~~ 233 (275)
+.+..
T Consensus 224 ~~~~~ 228 (229)
T COG1011 224 DLLER 228 (229)
T ss_pred HHHhh
Confidence 77653
No 46
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=99.79 E-value=1.3e-18 Score=143.25 Aligned_cols=167 Identities=11% Similarity=0.187 Sum_probs=111.8
Q ss_pred eEEEEEcCCcccCCccHHHH--HHH-hCCCh------------HHHhhcCCCChHHHHHHHHHHHHhCCCCHHHHHHHHh
Q 044553 4 IVVIFDFDKTIIDCDSDNFV--VDE-LGATD------------LFNQLLPTMPWNSLMDRMMKELHSQGKTIEDIVEVLK 68 (275)
Q Consensus 4 ~~viFD~DGTL~d~~~~~~~--~~~-~g~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (275)
.+|+||+||||++.+....+ +.. .+.+. +.....+.....+....+.+... ...+.+++...+.
T Consensus 1 ~~viFDldgvL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 79 (199)
T PRK09456 1 MLYIFDLGNVIVDIDFNRVLGVWSDLSRVPLATLKKRFTMGEAFHQHERGEISDEAFAEALCHEMA-LSLSYEQFAHGWQ 79 (199)
T ss_pred CEEEEeCCCccccCcHHHHHHHHHHhcCCCHHHHHHHHhcCcHHHHHhcCCCCHHHHHHHHHHHhC-CCCCHHHHHHHHH
Confidence 37999999999998652211 111 12210 11111122333344444444332 2334444443332
Q ss_pred c--CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHH-cCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCC
Q 044553 69 R--IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEH-LGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGC 145 (275)
Q Consensus 69 ~--~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~-~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~ 145 (275)
. ..++||+.++|+.|+++|++++|+||++...+...+.. .++..+|+.+++++... ..||+|
T Consensus 80 ~~~~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~------~~KP~p--------- 144 (199)
T PRK09456 80 AVFVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLG------MRKPEA--------- 144 (199)
T ss_pred HHHhccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccC------CCCCCH---------
Confidence 2 46899999999999999999999999998877766655 47888999998876532 347755
Q ss_pred CcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEee
Q 044553 146 NLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMP 197 (275)
Q Consensus 146 ~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~ 197 (275)
++++.++.+++.. |++|+||||+..|+.+|+++|+..+.+.
T Consensus 145 ----------~~~~~~~~~~~~~-p~~~l~vgD~~~di~aA~~aG~~~i~~~ 185 (199)
T PRK09456 145 ----------RIYQHVLQAEGFS-AADAVFFDDNADNIEAANALGITSILVT 185 (199)
T ss_pred ----------HHHHHHHHHcCCC-hhHeEEeCCCHHHHHHHHHcCCEEEEec
Confidence 6777777777665 5899999999999999999888766554
No 47
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=99.79 E-value=5.4e-19 Score=153.27 Aligned_cols=126 Identities=13% Similarity=0.064 Sum_probs=89.2
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcc--eEecCCCccCCCCceeecccCCCCCCCCCCCc
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFS--EINTNPGFVDEEGRLRIFPFHDFTKCSHGCNL 147 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd--~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~ 147 (275)
+.++||+.++|+.|+++|++++|+||++...+..+++.++...+|+ .+++++.. ...||.|
T Consensus 143 ~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~------~~~KP~p----------- 205 (286)
T PLN02779 143 LPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDDV------PKKKPDP----------- 205 (286)
T ss_pred CCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEecccc------CCCCCCH-----------
Confidence 5899999999999999999999999999999999998874334443 12243321 1346655
Q ss_pred CCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHH
Q 044553 148 CPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEEL 227 (275)
Q Consensus 148 ~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el 227 (275)
.++..++..++.. |++|+||||+.+|+.+|+++|+..+.+..+......+ ..+ ...++++.++
T Consensus 206 --------~~~~~a~~~~~~~-p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l-------~~a-d~vi~~~~~l 268 (286)
T PLN02779 206 --------DIYNLAAETLGVD-PSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDF-------SGA-DAVFDCLGDV 268 (286)
T ss_pred --------HHHHHHHHHhCcC-hHHEEEEeCCHHhHHHHHHcCCEEEEEccCCcccccc-------CCC-cEEECChhhc
Confidence 6677777777655 5899999999999999999998766554332222222 112 2356777776
Q ss_pred HH
Q 044553 228 EQ 229 (275)
Q Consensus 228 ~~ 229 (275)
..
T Consensus 269 ~~ 270 (286)
T PLN02779 269 PL 270 (286)
T ss_pred ch
Confidence 54
No 48
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=99.79 E-value=6.6e-20 Score=146.76 Aligned_cols=164 Identities=23% Similarity=0.299 Sum_probs=117.2
Q ss_pred EEEEcCCcccCCccH-----HH-HHHHhCCChHHHhhc--CCCChHHHHHHHHHHHHhCCCC-HHHHHHH--HhcCCCCC
Q 044553 6 VIFDFDKTIIDCDSD-----NF-VVDELGATDLFNQLL--PTMPWNSLMDRMMKELHSQGKT-IEDIVEV--LKRIPIHP 74 (275)
Q Consensus 6 viFD~DGTL~d~~~~-----~~-~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~p 74 (275)
|+||+||||+++... .. +++.++.+....... ........+..++......... .+.+.+. .....++|
T Consensus 1 iifD~dgtL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (176)
T PF13419_consen 1 IIFDLDGTLVDTDPAIFRALQRLALEEFGLEISAEELRELFGKSYEEALERLLERFGIDPEEIQELFREYNLESKLQPYP 80 (176)
T ss_dssp EEEESBTTTEEHHHHHHHHHHHHHHHHTTHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGEEEST
T ss_pred cEEECCCCcEeCHHHHHHHHHHHHHHHhCCCCCHHHHHHHhCCCHHHHHHHhhhccchhHHHHHHHhhhhhhhhccchhh
Confidence 799999999998762 22 355666542222221 2233344455554443221101 1222332 35789999
Q ss_pred CHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCch
Q 044553 75 RVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCK 154 (275)
Q Consensus 75 g~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K 154 (275)
|+.++|+.|+++|++++++||++...++..++++|+..+|+.+++.+... ..||.
T Consensus 81 ~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~~~~~------~~Kp~------------------- 135 (176)
T PF13419_consen 81 GVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISSDDVG------SRKPD------------------- 135 (176)
T ss_dssp THHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEGGGSS------SSTTS-------------------
T ss_pred hhhhhhhhcccccceeEEeecCCcccccccccccccccccccccccchhh------hhhhH-------------------
Confidence 99999999999999999999999999999999999999999999876431 23554
Q ss_pred HHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeE
Q 044553 155 GVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHV 195 (275)
Q Consensus 155 ~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~ 195 (275)
...++.++.+++.. |++|++|||+..|+.+|+.+|+..++
T Consensus 136 ~~~~~~~~~~~~~~-p~~~~~vgD~~~d~~~A~~~G~~~i~ 175 (176)
T PF13419_consen 136 PDAYRRALEKLGIP-PEEILFVGDSPSDVEAAKEAGIKTIW 175 (176)
T ss_dssp HHHHHHHHHHHTSS-GGGEEEEESSHHHHHHHHHTTSEEEE
T ss_pred HHHHHHHHHHcCCC-cceEEEEeCCHHHHHHHHHcCCeEEe
Confidence 47788888888765 58999999999999999998886654
No 49
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=99.79 E-value=8.1e-19 Score=144.28 Aligned_cols=90 Identities=13% Similarity=0.003 Sum_probs=74.7
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCC
Q 044553 72 IHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPN 151 (275)
Q Consensus 72 ~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~ 151 (275)
+.+++.++|+.|++.|++++|+||++...++.+++++|+..+|+.+++.+... . ||.|
T Consensus 107 ~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~------~-KP~p--------------- 164 (197)
T TIGR01548 107 TLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIWMEDCP------P-KPNP--------------- 164 (197)
T ss_pred cccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEeecCCC------C-CcCH---------------
Confidence 44556999999999999999999999999999999999999999998876532 2 6655
Q ss_pred CchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccc
Q 044553 152 MCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLK 188 (275)
Q Consensus 152 ~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~ 188 (275)
+.+...+.+++.. +++|+||||+.+|+.+|++
T Consensus 165 ----~~~~~~~~~~~~~-~~~~i~vGD~~~Di~aA~~ 196 (197)
T TIGR01548 165 ----EPLILAAKALGVE-ACHAAMVGDTVDDIITGRK 196 (197)
T ss_pred ----HHHHHHHHHhCcC-cccEEEEeCCHHHHHHHHh
Confidence 5566666666654 5799999999999998854
No 50
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=99.78 E-value=1.2e-18 Score=144.64 Aligned_cols=104 Identities=15% Similarity=0.103 Sum_probs=80.4
Q ss_pred cCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHH--HHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCC
Q 044553 69 RIPIHPRVVPAIKSAHALGCELRIVSDANLFF--IETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCN 146 (275)
Q Consensus 69 ~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~--i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~ 146 (275)
...++||+.++|+.|+++|++++|+||+.... ....+...++..+|+.|++++... ..||+|
T Consensus 92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~------~~KP~p---------- 155 (211)
T TIGR02247 92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVESCLEG------LRKPDP---------- 155 (211)
T ss_pred ccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEeeecC------CCCCCH----------
Confidence 47799999999999999999999999986543 333444568889999988765321 347766
Q ss_pred cCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeec
Q 044553 147 LCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPR 198 (275)
Q Consensus 147 ~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~ 198 (275)
.+++.++.+++.. |++|+||||+..|+.+|+++|+..+.+.+
T Consensus 156 ---------~~~~~~~~~~g~~-~~~~l~i~D~~~di~aA~~aG~~~i~v~~ 197 (211)
T TIGR02247 156 ---------RIYQLMLERLGVA-PEECVFLDDLGSNLKPAAALGITTIKVSD 197 (211)
T ss_pred ---------HHHHHHHHHcCCC-HHHeEEEcCCHHHHHHHHHcCCEEEEECC
Confidence 5666777777654 58999999999999999998886665543
No 51
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.78 E-value=2.1e-18 Score=172.05 Aligned_cols=194 Identities=13% Similarity=0.109 Sum_probs=132.1
Q ss_pred CceEEEEEcCCcccCCccH-----HHHHHHhCCChHHHhhc--CCCChHHHHHHHHHHHHhCCCCHH----HHH----HH
Q 044553 2 SGIVVIFDFDKTIIDCDSD-----NFVVDELGATDLFNQLL--PTMPWNSLMDRMMKELHSQGKTIE----DIV----EV 66 (275)
Q Consensus 2 ~~~~viFD~DGTL~d~~~~-----~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~----~~~----~~ 66 (275)
.+++|+|||||||+|+... ..+++++|++....... .+......+..+.......+...+ ++. +.
T Consensus 74 ~ikaVIFDlDGTLiDS~~~~~~a~~~~~~~~G~~it~e~~~~~~G~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 153 (1057)
T PLN02919 74 KVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFVPFMGTGEANFLGGVASVKGVKGFDPDAAKKRFFEIYLEK 153 (1057)
T ss_pred CCCEEEECCCCCeEeChHHHHHHHHHHHHHcCCCCCHHHHHHHhCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHH
Confidence 4689999999999999653 56778888763222221 122223333322221111112211 111 11
Q ss_pred Hh---cCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCc-CCcceEecCCCccCCCCceeecccCCCCCCC
Q 044553 67 LK---RIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIR-DCFSEINTNPGFVDEEGRLRIFPFHDFTKCS 142 (275)
Q Consensus 67 ~~---~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~-~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~ 142 (275)
+. ...++||+.++|++|+++|++++|+||+....++..++++|+. .+|+.+++.+... ..||.|
T Consensus 154 ~~~~~~~~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~------~~KP~P------ 221 (1057)
T PLN02919 154 YAKPNSGIGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFE------NLKPAP------ 221 (1057)
T ss_pred hhhcccCccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECcccc------cCCCCH------
Confidence 11 1247999999999999999999999999999999999999996 7899999877532 457755
Q ss_pred CCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCC
Q 044553 143 HGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWT 222 (275)
Q Consensus 143 ~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 222 (275)
+++..++.+++.. |++|+||||+..|+.+|+++|+..+++.. ++...++....+ ...++
T Consensus 222 -------------e~~~~a~~~lgv~-p~e~v~IgDs~~Di~AA~~aGm~~I~v~~-~~~~~~L~~~~a------~~vi~ 280 (1057)
T PLN02919 222 -------------DIFLAAAKILGVP-TSECVVIEDALAGVQAARAAGMRCIAVTT-TLSEEILKDAGP------SLIRK 280 (1057)
T ss_pred -------------HHHHHHHHHcCcC-cccEEEEcCCHHHHHHHHHcCCEEEEECC-CCCHHHHhhCCC------CEEEC
Confidence 6677777777665 58999999999999999999987666654 444455544332 22578
Q ss_pred ChHHHH
Q 044553 223 DGEELE 228 (275)
Q Consensus 223 ~~~el~ 228 (275)
++.++.
T Consensus 281 ~l~el~ 286 (1057)
T PLN02919 281 DIGNIS 286 (1057)
T ss_pred ChHHCC
Confidence 888874
No 52
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=99.78 E-value=3.9e-18 Score=141.18 Aligned_cols=176 Identities=19% Similarity=0.257 Sum_probs=129.1
Q ss_pred CceEEEEEcCCcccCCccHHHHHHHhCCChHHHhhc-----CCCChHHHHHHHHHHHHhCCCCHHHHHHHHhc-CCCCCC
Q 044553 2 SGIVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLL-----PTMPWNSLMDRMMKELHSQGKTIEDIVEVLKR-IPIHPR 75 (275)
Q Consensus 2 ~~~~viFD~DGTL~d~~~~~~~~~~~g~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~pg 75 (275)
++++++||+||||++...+..+....|......... ....+...++.....+ .+.+.+.+.+..++ +.++||
T Consensus 4 ~~~L~vFD~D~TLi~~~~~~~~~~~~g~~~~v~~~t~~~~~~~~~~~~~~~~~v~~l--~g~~~~~v~~~~~~~~~l~~g 81 (212)
T COG0560 4 MKKLAVFDLDGTLINAELIDELARGAGVGEEVLAITERAMRGELDFEESLRLRVALL--KGLPVEVLEEVREEFLRLTPG 81 (212)
T ss_pred ccceEEEecccchhhHHHHHHHHHHhCCHHHHHHHHHHHhcccccHHHHHHHHHHHh--CCCCHHHHHHHHHhcCcCCcc
Confidence 578999999999999877888888888865433221 1223344444333333 46778888888888 999999
Q ss_pred HHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchH
Q 044553 76 VVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKG 155 (275)
Q Consensus 76 ~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~ 155 (275)
+.+++++|++.|++++|+|++....++++.+.+|++..+. +...... |.+.++.... .| .+.+|.
T Consensus 82 a~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~a----n~l~~~d-G~ltG~v~g~------~~----~~~~K~ 146 (212)
T COG0560 82 AEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVA----NELEIDD-GKLTGRVVGP------IC----DGEGKA 146 (212)
T ss_pred HHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchhee----eEEEEeC-CEEeceeeee------ec----CcchHH
Confidence 9999999999999999999999999999999999875544 4333322 4444433221 01 124599
Q ss_pred HHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEe
Q 044553 156 VVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVM 196 (275)
Q Consensus 156 ~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~ 196 (275)
..++++...++.. +++++++|||.||+.+-..+|. .+++
T Consensus 147 ~~l~~~~~~~g~~-~~~~~a~gDs~nDlpml~~ag~-~ia~ 185 (212)
T COG0560 147 KALRELAAELGIP-LEETVAYGDSANDLPMLEAAGL-PIAV 185 (212)
T ss_pred HHHHHHHHHcCCC-HHHeEEEcCchhhHHHHHhCCC-CeEe
Confidence 9999999988775 4799999999999988866554 3443
No 53
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=99.78 E-value=9.8e-19 Score=141.60 Aligned_cols=99 Identities=15% Similarity=0.191 Sum_probs=81.4
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCP 149 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~ 149 (275)
.+++||+.++|++|+++|++++|+||+.... ..++.++|+..+|+.+++++... ..||+|
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~~~~~~------~~KP~~------------- 143 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIFSGDVG------RGKPDP------------- 143 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEEcCCCC------CCCCCH-------------
Confidence 6899999999999999999999999999888 66666799999999988765421 346655
Q ss_pred CCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeE
Q 044553 150 PNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHV 195 (275)
Q Consensus 150 ~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~ 195 (275)
..++.++.+++.. |++|+||||+..|+.+|+++|+..++
T Consensus 144 ------~~~~~~~~~~~~~-~~~~~~vgD~~~di~aA~~~G~~~i~ 182 (183)
T TIGR01509 144 ------DIYLLALKKLGLK-PEECLFVDDSPAGIEAAKAAGMHTVL 182 (183)
T ss_pred ------HHHHHHHHHcCCC-cceEEEEcCCHHHHHHHHHcCCEEEe
Confidence 6667777777665 58999999999999999888875543
No 54
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=99.77 E-value=1.7e-18 Score=136.59 Aligned_cols=149 Identities=18% Similarity=0.212 Sum_probs=102.7
Q ss_pred EEEEEcCCcccCCcc-----HHHHHHHhCCChHHHhhcCCCChHHHHHHHHHHHHhCCCCHHHHHHHHhcCCCCCCHHHH
Q 044553 5 VVIFDFDKTIIDCDS-----DNFVVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTIEDIVEVLKRIPIHPRVVPA 79 (275)
Q Consensus 5 ~viFD~DGTL~d~~~-----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~ 79 (275)
+|+||+||||+|+.. +..+++++|.....-....+..... +..... ..+++..+......+||+.++
T Consensus 1 ~iifD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~-------~~~~~~~~~~~~~~~~g~~e~ 72 (154)
T TIGR01549 1 AILFDIDGTLVDSSFAIRRAFEETLEEFGEDFQALKALRGLAEEL-LYRIAT-------SFEELLGYDAEEAYIRGAADL 72 (154)
T ss_pred CeEecCCCcccccHHHHHHHHHHHHHHhcccHHHHHHHHccChHH-HHHHHH-------HHHHHhCcchhheeccCHHHH
Confidence 489999999999953 3556666775321111111111111 111111 122222223355678999999
Q ss_pred HHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchHHHHH
Q 044553 80 IKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIE 159 (275)
Q Consensus 80 L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~l~ 159 (275)
|+.|+++|++++|+||+....+...++.+ +..+|+.+++.+.. ..||.| ..+.
T Consensus 73 l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~i~~~~~~-------~~Kp~~-------------------~~~~ 125 (154)
T TIGR01549 73 LKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFDLILGSDEF-------GAKPEP-------------------EIFL 125 (154)
T ss_pred HHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCcEEEecCCC-------CCCcCH-------------------HHHH
Confidence 99999999999999999999999999987 88899988876542 246544 6777
Q ss_pred HHHHhhhcCCCCeEEEEcCCCCCcccccccC
Q 044553 160 RIQASLSKEGNKKIIYLGDGSGDYCPSLKLS 190 (275)
Q Consensus 160 ~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~ 190 (275)
.++.+++.. + +|+||||+..|+.+|+++|
T Consensus 126 ~~~~~~~~~-~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 126 AALESLGLP-P-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHcCCC-C-CEEEEeCCHHHHHHHHHcc
Confidence 888877665 5 8999999999999987654
No 55
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=99.74 E-value=4.7e-17 Score=128.00 Aligned_cols=166 Identities=20% Similarity=0.272 Sum_probs=129.1
Q ss_pred ceEEEEEcCCcccCCccHHHHHHHhCCChHHHhhc-----CCCChHHHHHHHHHHHHhCCCCHHHHHHHH--hcCCCCCC
Q 044553 3 GIVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLL-----PTMPWNSLMDRMMKELHSQGKTIEDIVEVL--KRIPIHPR 75 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~~~~~~~~~g~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~pg 75 (275)
.++|+||+|-|++..+.+..+....|.......+. +...+.+.++.-+..+. ...+++.++. +.+.+.||
T Consensus 16 ~~aVcFDvDSTvi~eEgIdelA~~~G~~~~Va~~T~rAMng~~~F~eaL~~Rl~llq---p~~~qv~~~v~~~k~~lT~G 92 (227)
T KOG1615|consen 16 ADAVCFDVDSTVIQEEGIDELAAYCGVGEAVAEVTRRAMNGEADFQEALAARLSLLQ---PLQVQVEQFVIKQKPTLTPG 92 (227)
T ss_pred cCeEEEecCcchhHHhhHHHHHHHhCchHHHHHHHHHHhCCCCcHHHHHHHHHHHhc---ccHHHHHHHHhcCCCccCCC
Confidence 57999999999999999999999999876544332 23456666655555443 3444444443 35889999
Q ss_pred HHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceee-cccCCCCCCCCCCCcCCCCCch
Q 044553 76 VVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRI-FPFHDFTKCSHGCNLCPPNMCK 154 (275)
Q Consensus 76 ~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~-kp~~~~~~~~~~~~~~~~~~~K 154 (275)
++++.+.|+++|..++++|++...++..+...+|++ +..+++|...++.+|++.+ +-.. +. ..+.||
T Consensus 93 i~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~--~~n~yAN~l~fd~~Gk~~gfd~~~-----pt-----sdsggK 160 (227)
T KOG1615|consen 93 IRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIP--KSNIYANELLFDKDGKYLGFDTNE-----PT-----SDSGGK 160 (227)
T ss_pred HHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCc--HhhhhhheeeeccCCcccccccCC-----cc-----ccCCcc
Confidence 999999999999999999999999999999999997 4568899988988887766 3221 11 234679
Q ss_pred HHHHHHHHHhhhcCCCCeEEEEcCCCCCcccc
Q 044553 155 GVVIERIQASLSKEGNKKIIYLGDGSGDYCPS 186 (275)
Q Consensus 155 ~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a 186 (275)
.+++..+.+.+ +.+.++||||+.+|+.+.
T Consensus 161 a~~i~~lrk~~---~~~~~~mvGDGatDlea~ 189 (227)
T KOG1615|consen 161 AEVIALLRKNY---NYKTIVMVGDGATDLEAM 189 (227)
T ss_pred HHHHHHHHhCC---ChheeEEecCCccccccC
Confidence 99999998854 357999999999999766
No 56
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=99.74 E-value=1.3e-17 Score=139.83 Aligned_cols=145 Identities=12% Similarity=0.012 Sum_probs=97.6
Q ss_pred eEEEEEcCCcccCCccHHHHHHHhCCChHHHhhcCCCChHHHHHHHHHHHHhCCCCHHHHHHHH-hcCCCCCCHHHHHHH
Q 044553 4 IVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTIEDIVEVL-KRIPIHPRVVPAIKS 82 (275)
Q Consensus 4 ~~viFD~DGTL~d~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~pg~~e~L~~ 82 (275)
.+|+||+||||+|+.+.. .+|.+......+........++.+ .+.. ....+++++.++|++
T Consensus 64 ~aViFDlDgTLlDSs~~~----~~G~~~~s~~~~~~l~g~~~w~~~--------------~~~~~~~s~p~~~a~elL~~ 125 (237)
T TIGR01672 64 IAVSFDIDDTVLFSSPGF----WRGKKTFSPGSEDYLKNQVFWEKV--------------NNGWDEFSIPKEVARQLIDM 125 (237)
T ss_pred eEEEEeCCCccccCcHHH----hCCcccCCHHHhhhhcChHHHHHH--------------HHhcccCCcchhHHHHHHHH
Confidence 399999999999998754 255442211111111111111111 1111 335677789999999
Q ss_pred HHHcCCcEEEEeCC----CHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchHHHH
Q 044553 83 AHALGCELRIVSDA----NLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVI 158 (275)
Q Consensus 83 L~~~g~~~~IvS~~----~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~l 158 (275)
|+++|++++++||+ ....++.+++++|+..+|+.+++.+... ..||.+ .
T Consensus 126 l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~------~~Kp~~------------------~--- 178 (237)
T TIGR01672 126 HQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPG------QYQYTK------------------T--- 178 (237)
T ss_pred HHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCC------CCCCCH------------------H---
Confidence 99999999999998 7778999999999999999888766531 123322 1
Q ss_pred HHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecC
Q 044553 159 ERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK 199 (275)
Q Consensus 159 ~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~ 199 (275)
.++.++ .-++||||+.+|+.+|+++|...+.+.++
T Consensus 179 -~~l~~~-----~i~i~vGDs~~DI~aAk~AGi~~I~V~~g 213 (237)
T TIGR01672 179 -QWIQDK-----NIRIHYGDSDNDITAAKEAGARGIRILRA 213 (237)
T ss_pred -HHHHhC-----CCeEEEeCCHHHHHHHHHCCCCEEEEEec
Confidence 223332 34899999999999999988877776543
No 57
>PHA02597 30.2 hypothetical protein; Provisional
Probab=99.73 E-value=8.1e-18 Score=138.28 Aligned_cols=181 Identities=8% Similarity=0.070 Sum_probs=111.9
Q ss_pred ceEEEEEcCCcccCCcc-HHHHHHHhCCChH-HHhhcCCCChHHHHHHHHHHHHhCCCCHHH----HH--HHHhcCCCCC
Q 044553 3 GIVVIFDFDKTIIDCDS-DNFVVDELGATDL-FNQLLPTMPWNSLMDRMMKELHSQGKTIED----IV--EVLKRIPIHP 74 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~-~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~--~~~~~~~~~p 74 (275)
+++|+||+||||+|... +..+++++|++.. .....+.... ..+...+. ......++ +. .......++|
T Consensus 2 ~k~viFDlDGTLiD~~~~~~~~~~~~g~~~~~~~~~~g~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~p 77 (197)
T PHA02597 2 KPTILTDVDGVLLSWQSGLPYFAQKYNIPTDHILKMIQDERF-RDPGELFG---CDQELAKKLIEKYNNSDFIRYLSAYD 77 (197)
T ss_pred CcEEEEecCCceEchhhccHHHHHhcCCCHHHHHHHHhHhhh-cCHHHHhc---ccHHHHHHHhhhhhHHHHHHhccCCC
Confidence 58999999999999643 4567788887632 1111111000 00111110 00000011 11 1234577999
Q ss_pred CHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCC----cceEecCCCccCCCCceeecccCCCCCCCCCCCcCCC
Q 044553 75 RVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDC----FSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPP 150 (275)
Q Consensus 75 g~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~----fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~ 150 (275)
|+.++|++|++. ++++++||+........++.+++..+ |+.+++.+.. ||
T Consensus 78 G~~e~L~~L~~~-~~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~~---------~~---------------- 131 (197)
T PHA02597 78 DALDVINKLKED-YDFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGHD---------ES---------------- 131 (197)
T ss_pred CHHHHHHHHHhc-CCEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEeccC---------cc----------------
Confidence 999999999987 57888999877666667777777654 4556654431 22
Q ss_pred CCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCccccccc--CCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHHH
Q 044553 151 NMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKL--SEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELE 228 (275)
Q Consensus 151 ~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el~ 228 (275)
|.+.+..++.+++ +++++||||+.+|+.+|+++ |...+.+. +++. +..+.. .+.+.++.|+.
T Consensus 132 ---kp~~~~~a~~~~~---~~~~v~vgDs~~di~aA~~a~~Gi~~i~~~-~~~~--------~~~~~~-~~~~~~~~~~~ 195 (197)
T PHA02597 132 ---KEKLFIKAKEKYG---DRVVCFVDDLAHNLDAAHEALSQLPVIHML-RGER--------DHIPKL-AHRVKSWNDIE 195 (197)
T ss_pred ---cHHHHHHHHHHhC---CCcEEEeCCCHHHHHHHHHHHcCCcEEEec-chhh--------ccccch-hhhhccHHHHh
Confidence 4477778888776 47899999999999999998 88766653 3331 111222 34677787775
Q ss_pred H
Q 044553 229 Q 229 (275)
Q Consensus 229 ~ 229 (275)
.
T Consensus 196 ~ 196 (197)
T PHA02597 196 N 196 (197)
T ss_pred c
Confidence 3
No 58
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=99.73 E-value=1.7e-17 Score=134.69 Aligned_cols=138 Identities=14% Similarity=0.044 Sum_probs=92.9
Q ss_pred hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCH---------------HHHHHHHHHcCCcCCcceEecCCCccCCCCceee
Q 044553 68 KRIPIHPRVVPAIKSAHALGCELRIVSDANL---------------FFIETILEHLGIRDCFSEINTNPGFVDEEGRLRI 132 (275)
Q Consensus 68 ~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~---------------~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~ 132 (275)
....++||+.++|++|+++|++++|+||++. ..+...++++|+ .|+.++.+..... +.....
T Consensus 26 ~~~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~--~f~~i~~~~~~~~-~~~~~~ 102 (181)
T PRK08942 26 DEWIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGG--RLDGIYYCPHHPE-DGCDCR 102 (181)
T ss_pred HHeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCC--ccceEEECCCCCC-CCCcCC
Confidence 3467899999999999999999999999863 345566777777 3777665432110 011134
Q ss_pred cccCCCCCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCC
Q 044553 133 FPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPM 212 (275)
Q Consensus 133 kp~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~ 212 (275)
||+| ..+..++..++.. +++|+||||+.+|+.+|+++|+..+. ...++....+....+.
T Consensus 103 KP~p-------------------~~~~~~~~~l~~~-~~~~~~VgDs~~Di~~A~~aG~~~i~-v~~g~~~~~~~~~~~~ 161 (181)
T PRK08942 103 KPKP-------------------GMLLSIAERLNID-LAGSPMVGDSLRDLQAAAAAGVTPVL-VRTGKGVTTLAEGAAP 161 (181)
T ss_pred CCCH-------------------HHHHHHHHHcCCC-hhhEEEEeCCHHHHHHHHHCCCeEEE-EcCCCCchhhhcccCC
Confidence 6655 6677777777654 58999999999999999999985444 4455432222221110
Q ss_pred ceeEEEeeCCChHHHHHHHHH
Q 044553 213 LIKAEIHEWTDGEELEQILLH 233 (275)
Q Consensus 213 ~~~~~~~~~~~~~el~~~l~~ 233 (275)
. ...++++.++.+++.+
T Consensus 162 ---~-~~ii~~l~el~~~l~~ 178 (181)
T PRK08942 162 ---G-TWVLDSLADLPQALKK 178 (181)
T ss_pred ---C-ceeecCHHHHHHHHHh
Confidence 0 1257899998887653
No 59
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=99.72 E-value=1.2e-17 Score=134.65 Aligned_cols=93 Identities=16% Similarity=0.227 Sum_probs=75.5
Q ss_pred HHHHHhcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCC
Q 044553 63 IVEVLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCS 142 (275)
Q Consensus 63 ~~~~~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~ 142 (275)
+.+.+....++||+.++|+ +++|+||++...++..++++|+..+|+.|++++... ..||.|
T Consensus 82 ~~~~~~~~~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~------~~KP~p------ 142 (175)
T TIGR01493 82 LRDAYKNLPPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYFDRAFSVDTVR------AYKPDP------ 142 (175)
T ss_pred HHHHHhcCCCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHHhhhccHhhcC------CCCCCH------
Confidence 3344567889999999998 488999999999999999999999999988877431 357766
Q ss_pred CCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccc
Q 044553 143 HGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLK 188 (275)
Q Consensus 143 ~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~ 188 (275)
+++..++.+++.. |++|+||||+.+|+.+|++
T Consensus 143 -------------~~f~~~~~~~~~~-p~~~l~vgD~~~Di~~A~~ 174 (175)
T TIGR01493 143 -------------VVYELVFDTVGLP-PDRVLMVAAHQWDLIGARK 174 (175)
T ss_pred -------------HHHHHHHHHHCCC-HHHeEeEecChhhHHHHhc
Confidence 5666777776654 5899999999999998854
No 60
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=99.72 E-value=2e-17 Score=133.55 Aligned_cols=133 Identities=14% Similarity=0.111 Sum_probs=90.6
Q ss_pred hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCH---------------HHHHHHHHHcCCcCCcceEecCCCccCCC-----
Q 044553 68 KRIPIHPRVVPAIKSAHALGCELRIVSDANL---------------FFIETILEHLGIRDCFSEINTNPGFVDEE----- 127 (275)
Q Consensus 68 ~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~---------------~~i~~~l~~~gl~~~fd~i~~~~~~~~~~----- 127 (275)
.++.++||+.++|++|+++|++++|+||++. ..+...++++++. |+.++.+.......
T Consensus 23 ~~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~i~~~~~~~~~~~~~~~ 100 (176)
T TIGR00213 23 DNFEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVD--LDGIYYCPHHPEGVEEFRQ 100 (176)
T ss_pred HHeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCC--ccEEEECCCCCcccccccC
Confidence 3577899999999999999999999999884 3455677777776 67665443211110
Q ss_pred CceeecccCCCCCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHH
Q 044553 128 GRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLI 207 (275)
Q Consensus 128 g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~ 207 (275)
.....|| +...+..++.+++.. +++|+||||+.+|+.+|+++|...+..+.+++......
T Consensus 101 ~~~~~KP-------------------~p~~~~~a~~~~~~~-~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~ 160 (176)
T TIGR00213 101 VCDCRKP-------------------KPGMLLQARKELHID-MAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEA 160 (176)
T ss_pred CCCCCCC-------------------CHHHHHHHHHHcCcC-hhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccc
Confidence 0112344 457788888887765 58999999999999999999987644555554321111
Q ss_pred hhCCCceeEEEeeCCChHHHH
Q 044553 208 IRNPMLIKAEIHEWTDGEELE 228 (275)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~el~ 228 (275)
.. .+ ...++++.||.
T Consensus 161 ~~-----~a-d~~i~~~~el~ 175 (176)
T TIGR00213 161 EN-----IA-DWVLNSLADLP 175 (176)
T ss_pred cc-----cC-CEEeccHHHhh
Confidence 11 11 33678888875
No 61
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=99.72 E-value=1.1e-16 Score=131.87 Aligned_cols=171 Identities=17% Similarity=0.160 Sum_probs=111.0
Q ss_pred EEEEEcCCcccCCccHHHHHHHh-C---CC--hHH-------HhhcC-CCChHHHHHHHHHHHHhCCCCHHHHHHHHhc-
Q 044553 5 VVIFDFDKTIIDCDSDNFVVDEL-G---AT--DLF-------NQLLP-TMPWNSLMDRMMKELHSQGKTIEDIVEVLKR- 69 (275)
Q Consensus 5 ~viFD~DGTL~d~~~~~~~~~~~-g---~~--~~~-------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 69 (275)
+++||+||||++.++....+... + .. ... ..... ..........+.... -.+.+.+++....++
T Consensus 1 ~a~FD~DgTL~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~l~~~~~~~ 79 (202)
T TIGR01490 1 LAFFDFDGTLTAKDTLFIFLKFLASKNILFEELRLPKVLARFEFFLNRGLDYMAYYRAFALDA-LAGLLEEDVRAIVEEF 79 (202)
T ss_pred CeEEccCCCCCCCchHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHH-HcCCCHHHHHHHHHHH
Confidence 47999999999998853332221 1 11 000 01111 111112222222211 236666665443322
Q ss_pred ------CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCC
Q 044553 70 ------IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSH 143 (275)
Q Consensus 70 ------~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~ 143 (275)
..++|++.++|+.++++|++++|+|++....++.+++++|++.+| +++..++.+|.+.+++... .
T Consensus 80 ~~~~~~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~----~~~l~~~~~g~~~g~~~~~-----~ 150 (202)
T TIGR01490 80 VNQKIESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAI----GTRLEESEDGIYTGNIDGN-----N 150 (202)
T ss_pred HHHHHHHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceE----ecceEEcCCCEEeCCccCC-----C
Confidence 468999999999999999999999999999999999999987544 4433333456667765421 0
Q ss_pred CCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCC
Q 044553 144 GCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 144 ~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
| .+..|...+++++.+.+.. +++|+++|||.+|+.++..++.
T Consensus 151 ----~-~g~~K~~~l~~~~~~~~~~-~~~~~~~gDs~~D~~~~~~a~~ 192 (202)
T TIGR01490 151 ----C-KGEGKVHALAELLAEEQID-LKDSYAYGDSISDLPLLSLVGH 192 (202)
T ss_pred ----C-CChHHHHHHHHHHHHcCCC-HHHcEeeeCCcccHHHHHhCCC
Confidence 1 1345888899988876654 4799999999999998876654
No 62
>PLN02811 hydrolase
Probab=99.71 E-value=2e-16 Score=132.26 Aligned_cols=164 Identities=11% Similarity=0.119 Sum_probs=109.7
Q ss_pred cCCcccCCcc-----HHHHHHHhCCChHHHhh--cCCCChHHHHHHHHHHHHhC-CCCHHHHH--------HHHhcCCCC
Q 044553 10 FDKTIIDCDS-----DNFVVDELGATDLFNQL--LPTMPWNSLMDRMMKELHSQ-GKTIEDIV--------EVLKRIPIH 73 (275)
Q Consensus 10 ~DGTL~d~~~-----~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--------~~~~~~~~~ 73 (275)
|||||+|+.. +..+++++|.+...... ..+.........+....... ....+++. .......++
T Consensus 1 ~DGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 80 (220)
T PLN02811 1 MDGLLLDTEKFYTEVQEKILARYGKTFDWSLKAKMMGKKAIEAARIFVEESGLSDSLSPEDFLVEREAMLQDLFPTSDLM 80 (220)
T ss_pred CCCcceecHHHHHHHHHHHHHHcCCCCCHHHHHHccCCCHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhhCCCC
Confidence 7999999965 35677888876322211 12223333444443332211 11222221 223467899
Q ss_pred CCHHHHHHHHHHcCCcEEEEeCCCHHHHHH-HHHHcCCcCCcceEecCC--CccCCCCceeecccCCCCCCCCCCCcCCC
Q 044553 74 PRVVPAIKSAHALGCELRIVSDANLFFIET-ILEHLGIRDCFSEINTNP--GFVDEEGRLRIFPFHDFTKCSHGCNLCPP 150 (275)
Q Consensus 74 pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~-~l~~~gl~~~fd~i~~~~--~~~~~~g~~~~kp~~~~~~~~~~~~~~~~ 150 (275)
||+.++|+.|+++|++++|+||+....+.. .++..++..+|+.+++.+ .. ...||.|
T Consensus 81 ~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~------~~~KP~p-------------- 140 (220)
T PLN02811 81 PGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEV------KQGKPAP-------------- 140 (220)
T ss_pred ccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhc------cCCCCCc--------------
Confidence 999999999999999999999998765544 344457888999999877 32 1347766
Q ss_pred CCchHHHHHHHHHhhh---cCCCCeEEEEcCCCCCcccccccCCCCeEeecC
Q 044553 151 NMCKGVVIERIQASLS---KEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK 199 (275)
Q Consensus 151 ~~~K~~~l~~~~~~~~---~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~ 199 (275)
+++..++.+++ .. +++|+||||+..|+.+|+++|...+.+.+.
T Consensus 141 -----~~~~~a~~~~~~~~~~-~~~~v~IgDs~~di~aA~~aG~~~i~v~~~ 186 (220)
T PLN02811 141 -----DIFLAAARRFEDGPVD-PGKVLVFEDAPSGVEAAKNAGMSVVMVPDP 186 (220)
T ss_pred -----HHHHHHHHHhCCCCCC-ccceEEEeccHhhHHHHHHCCCeEEEEeCC
Confidence 56666666664 33 589999999999999999999877776544
No 63
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=99.70 E-value=1.6e-17 Score=132.80 Aligned_cols=108 Identities=9% Similarity=0.064 Sum_probs=82.6
Q ss_pred hcCCCCCCHHHHHHHHHHcCCcEEEEeCC-CHHHHHHHHHHcCCc---------CCcceEecCCCccCCCCceeecccCC
Q 044553 68 KRIPIHPRVVPAIKSAHALGCELRIVSDA-NLFFIETILEHLGIR---------DCFSEINTNPGFVDEEGRLRIFPFHD 137 (275)
Q Consensus 68 ~~~~~~pg~~e~L~~L~~~g~~~~IvS~~-~~~~i~~~l~~~gl~---------~~fd~i~~~~~~~~~~g~~~~kp~~~ 137 (275)
.++.++||+.++|+.|+++|++++|+||+ ....++.+++.+|+. ++|+.+++++.. ...||.+
T Consensus 42 ~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~~~~------~~~kp~~- 114 (174)
T TIGR01685 42 TEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDRIEIYKP------NKAKQLE- 114 (174)
T ss_pred CEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhceeeeeccCC------chHHHHH-
Confidence 45789999999999999999999999998 888999999999998 999999986641 0223322
Q ss_pred CCCCCCCCCcCCCCCchHHHHHHHHHhh--hcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCch
Q 044553 138 FTKCSHGCNLCPPNMCKGVVIERIQASL--SKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFP 202 (275)
Q Consensus 138 ~~~~~~~~~~~~~~~~K~~~l~~~~~~~--~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~ 202 (275)
.+++.+.... +. .|++|+||||+..|+.+|+++|...+. +.+|+.
T Consensus 115 ------------------~i~~~~~~~~~~gl-~p~e~l~VgDs~~di~aA~~aGi~~i~-v~~g~~ 161 (174)
T TIGR01685 115 ------------------MILQKVNKVDPSVL-KPAQILFFDDRTDNVREVWGYGVTSCY-CPSGMD 161 (174)
T ss_pred ------------------HHHHHhhhcccCCC-CHHHeEEEcChhHhHHHHHHhCCEEEE-cCCCcc
Confidence 4455554432 23 368999999999999999988875444 445543
No 64
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=99.69 E-value=8.1e-16 Score=130.85 Aligned_cols=126 Identities=20% Similarity=0.168 Sum_probs=102.4
Q ss_pred HHhCCCCHHHHHHHHh--cCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCce
Q 044553 53 LHSQGKTIEDIVEVLK--RIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRL 130 (275)
Q Consensus 53 ~~~~~~~~~~~~~~~~--~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~ 130 (275)
+...+.+.+.+...+. .+.+.||+.+++++|+++|++++|+|+|....++.+++++|+...+..|++|...++.+|..
T Consensus 101 ~~~~~~~~e~i~~~v~~~~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvl 180 (277)
T TIGR01544 101 LVQQAFPKAKIKEIVAESDVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVL 180 (277)
T ss_pred HhcCCCCHHHHHHHHhhcCCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeE
Confidence 3445667888888886 79999999999999999999999999999999999999999987788999999999889999
Q ss_pred eecccCCCCCCCCCCCcCCCCCchHHHHH-HHHHhhh-cCCCCeEEEEcCCCCCccccccc
Q 044553 131 RIFPFHDFTKCSHGCNLCPPNMCKGVVIE-RIQASLS-KEGNKKIIYLGDGSGDYCPSLKL 189 (275)
Q Consensus 131 ~~kp~~~~~~~~~~~~~~~~~~~K~~~l~-~~~~~~~-~~~~~~~i~vGDs~~Di~~a~~~ 189 (275)
.++|.|. .+ ..+|.+.+. .....++ ..++++|+++|||.+|+.||..+
T Consensus 181 tG~~~P~----i~-------~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~ 230 (277)
T TIGR01544 181 KGFKGPL----IH-------TFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGV 230 (277)
T ss_pred eCCCCCc----cc-------ccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCC
Confidence 9987663 11 123666544 4454444 13468999999999999998654
No 65
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=99.69 E-value=2.4e-17 Score=129.21 Aligned_cols=107 Identities=16% Similarity=0.155 Sum_probs=78.2
Q ss_pred cCCCCCCHHHHHHHHHHcCCcEEEEeCCCH---------------HHHHHHHHHcCCcCCcceEecCCCccCCCCceeec
Q 044553 69 RIPIHPRVVPAIKSAHALGCELRIVSDANL---------------FFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIF 133 (275)
Q Consensus 69 ~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~---------------~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~k 133 (275)
...++||+.++|+.|+++|++++|+||+.. ..+...++++|+... ..+.+... .. +.....|
T Consensus 25 ~~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~~~-~~-~~~~~~K 101 (147)
T TIGR01656 25 DWQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVD-GVLFCPHH-PA-DNCSCRK 101 (147)
T ss_pred HeEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCcee-EEEECCCC-CC-CCCCCCC
Confidence 356899999999999999999999999873 567778889998621 12222110 00 0000125
Q ss_pred ccCCCCCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeec
Q 044553 134 PFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPR 198 (275)
Q Consensus 134 p~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~ 198 (275)
| +.++++.++.+++.. +++|+||||+..|+.+|+++|+..+++.+
T Consensus 102 P-------------------~~~~~~~~~~~~~~~-~~e~i~IGDs~~Di~~A~~~Gi~~v~i~~ 146 (147)
T TIGR01656 102 P-------------------KPGLILEALKRLGVD-ASRSLVVGDRLRDLQAARNAGLAAVLLVD 146 (147)
T ss_pred C-------------------CHHHHHHHHHHcCCC-hHHEEEEcCCHHHHHHHHHCCCCEEEecC
Confidence 5 447888888888765 58999999999999999999998777654
No 66
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=99.65 E-value=8.1e-16 Score=118.26 Aligned_cols=99 Identities=16% Similarity=0.188 Sum_probs=77.8
Q ss_pred cCCCCCCHHHHHHHHHHcCCcEEEEeCCC--------HHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCC
Q 044553 69 RIPIHPRVVPAIKSAHALGCELRIVSDAN--------LFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTK 140 (275)
Q Consensus 69 ~~~~~pg~~e~L~~L~~~g~~~~IvS~~~--------~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~ 140 (275)
+..++|++.++|++|+++|++++|+||+. ...++..++++|+. |+.++.... ..||.|
T Consensus 23 ~~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~~~--------~~KP~~---- 88 (132)
T TIGR01662 23 ERILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVP--IDVLYACPH--------CRKPKP---- 88 (132)
T ss_pred HheeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCC--EEEEEECCC--------CCCCCh----
Confidence 35679999999999999999999999998 88899999999986 333332221 236544
Q ss_pred CCCCCCcCCCCCchHHHHHHHHHhhh-cCCCCeEEEEcC-CCCCcccccccCCCCeEee
Q 044553 141 CSHGCNLCPPNMCKGVVIERIQASLS-KEGNKKIIYLGD-GSGDYCPSLKLSEGDHVMP 197 (275)
Q Consensus 141 ~~~~~~~~~~~~~K~~~l~~~~~~~~-~~~~~~~i~vGD-s~~Di~~a~~~~~~~~~~~ 197 (275)
+.++.++.+++ .. +++++|||| +.+|+.+|+.+|+..+++.
T Consensus 89 ---------------~~~~~~~~~~~~~~-~~~~v~IGD~~~~Di~~A~~~Gi~~i~~~ 131 (132)
T TIGR01662 89 ---------------GMFLEALKRFNEID-PEESVYVGDQDLTDLQAAKRAGLAFILVA 131 (132)
T ss_pred ---------------HHHHHHHHHcCCCC-hhheEEEcCCCcccHHHHHHCCCeEEEee
Confidence 67778888873 54 589999999 7999999999888766653
No 67
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=99.65 E-value=1.4e-16 Score=126.33 Aligned_cols=108 Identities=16% Similarity=0.155 Sum_probs=81.6
Q ss_pred hcCCCCCCHHHHHHHHHHcCCcEEEEeCCC---------------HHHHHHHHHHcCCcCCcceEe-cCCCccCCCCcee
Q 044553 68 KRIPIHPRVVPAIKSAHALGCELRIVSDAN---------------LFFIETILEHLGIRDCFSEIN-TNPGFVDEEGRLR 131 (275)
Q Consensus 68 ~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~---------------~~~i~~~l~~~gl~~~fd~i~-~~~~~~~~~g~~~ 131 (275)
..+.++||+.++|++|+++|++++|+||.+ ...+..+++++|+. |+.++ |.....+. ...
T Consensus 26 ~~~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~ii~~~~~~~~~--~~~ 101 (161)
T TIGR01261 26 EKLRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII--FDDVLICPHFPDDN--CDC 101 (161)
T ss_pred HHeeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc--eeEEEECCCCCCCC--CCC
Confidence 347889999999999999999999999973 55788899999996 76554 42100000 012
Q ss_pred ecccCCCCCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecC
Q 044553 132 IFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK 199 (275)
Q Consensus 132 ~kp~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~ 199 (275)
.|| |...++.+...++.. +++++||||+.+|+.+|+.+|+..+.+.+.
T Consensus 102 ~KP-------------------~~~~~~~~~~~~~~~-~~e~l~IGD~~~Di~~A~~aGi~~i~~~~~ 149 (161)
T TIGR01261 102 RKP-------------------KIKLLEPYLKKNLID-KARSYVIGDRETDMQLAENLGIRGIQYDEE 149 (161)
T ss_pred CCC-------------------CHHHHHHHHHHcCCC-HHHeEEEeCCHHHHHHHHHCCCeEEEEChh
Confidence 244 457888888877654 589999999999999999999887776644
No 68
>PRK06769 hypothetical protein; Validated
Probab=99.65 E-value=3.3e-16 Score=126.02 Aligned_cols=135 Identities=10% Similarity=0.009 Sum_probs=87.7
Q ss_pred cCCCCCCHHHHHHHHHHcCCcEEEEeCCCHH--------HHHHHHHHcCCcCCcceEe-cCCCccCCCCceeecccCCCC
Q 044553 69 RIPIHPRVVPAIKSAHALGCELRIVSDANLF--------FIETILEHLGIRDCFSEIN-TNPGFVDEEGRLRIFPFHDFT 139 (275)
Q Consensus 69 ~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~--------~i~~~l~~~gl~~~fd~i~-~~~~~~~~~g~~~~kp~~~~~ 139 (275)
.+.++||+.++|++|+++|++++|+||+... .....++.+|++.+|..+. +.+ +....||.|
T Consensus 26 ~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~------~~~~~KP~p--- 96 (173)
T PRK06769 26 SFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLCPHKHGD------GCECRKPST--- 96 (173)
T ss_pred HeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEECcCCCCC------CCCCCCCCH---
Confidence 4678999999999999999999999998642 1334466777755432221 111 111346655
Q ss_pred CCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHh--hCCCceeEE
Q 044553 140 KCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLII--RNPMLIKAE 217 (275)
Q Consensus 140 ~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~ 217 (275)
..+..++++++.. +++|+||||+.+|+.+|+++|+..+.+.++ +....+.. +......+
T Consensus 97 ----------------~~~~~~~~~l~~~-p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g-~~~~~~~~~~~~l~~~~~- 157 (173)
T PRK06769 97 ----------------GMLLQAAEKHGLD-LTQCAVIGDRWTDIVAAAKVNATTILVRTG-AGYDALHTYRDKWAHIEP- 157 (173)
T ss_pred ----------------HHHHHHHHHcCCC-HHHeEEEcCCHHHHHHHHHCCCeEEEEecC-CCchhhhhhhcccccCCC-
Confidence 6777777777654 589999999999999999999977766543 21111110 00000111
Q ss_pred EeeCCChHHHHHHH
Q 044553 218 IHEWTDGEELEQIL 231 (275)
Q Consensus 218 ~~~~~~~~el~~~l 231 (275)
...++++.||.++|
T Consensus 158 ~~~~~~~~el~~~l 171 (173)
T PRK06769 158 NYIAENFEDAVNWI 171 (173)
T ss_pred cchhhCHHHHHHHH
Confidence 23578888888765
No 69
>PRK11590 hypothetical protein; Provisional
Probab=99.65 E-value=1.2e-15 Score=126.86 Aligned_cols=168 Identities=12% Similarity=0.030 Sum_probs=103.8
Q ss_pred ceEEEEEcCCcccCCccH---HHHH-HHhCCChHH-H---hhcCCCChHHHHH-------HHHHHHHhCCCCHHH-----
Q 044553 3 GIVVIFDFDKTIIDCDSD---NFVV-DELGATDLF-N---QLLPTMPWNSLMD-------RMMKELHSQGKTIED----- 62 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~~---~~~~-~~~g~~~~~-~---~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~----- 62 (275)
+++++|||||||++.++. ...+ +++|++... . ...+ ........ .++.... .+.+.++
T Consensus 6 ~k~~iFD~DGTL~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~ig-~~l~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~ 83 (211)
T PRK11590 6 RRVVFFDLDGTLHQQDMFGSFLRYLLRRQPLNLLLVLPLLPVIG-LGLLVKGRAARWPMSLLLWGCT-FGHSEARLQALE 83 (211)
T ss_pred ceEEEEecCCCCcccchHHHHHHHHHHhcchhhHHHhHHHHHhc-cCcccchhhhhhhHHHHHHHHH-cCCCHHHHHHHH
Confidence 689999999999977764 2333 666655222 1 1111 11111111 1111111 1223332
Q ss_pred --HHHHHhc-CCCCCCHHHHH-HHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCC
Q 044553 63 --IVEVLKR-IPIHPRVVPAI-KSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDF 138 (275)
Q Consensus 63 --~~~~~~~-~~~~pg~~e~L-~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~ 138 (275)
+.+.+.. ..++||+.++| +.|+++|++++|+||++...++.+++.+|+.. .+.+++++......|.+.+.+
T Consensus 84 ~~f~~~~~~~~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~-~~~~i~t~l~~~~tg~~~g~~---- 158 (211)
T PRK11590 84 ADFVRWFRDNVTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP-RVNLIASQMQRRYGGWVLTLR---- 158 (211)
T ss_pred HHHHHHHHHhCcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc-cCceEEEEEEEEEccEECCcc----
Confidence 2222322 57899999999 57888999999999999999999999999633 456777775443333333221
Q ss_pred CCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCC
Q 044553 139 TKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 139 ~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
| .+..|...++++... ....++++|||.+|+.+...++.
T Consensus 159 ------c----~g~~K~~~l~~~~~~----~~~~~~aY~Ds~~D~pmL~~a~~ 197 (211)
T PRK11590 159 ------C----LGHEKVAQLERKIGT----PLRLYSGYSDSKQDNPLLYFCQH 197 (211)
T ss_pred ------C----CChHHHHHHHHHhCC----CcceEEEecCCcccHHHHHhCCC
Confidence 1 134488888877632 24678999999999987755444
No 70
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=99.64 E-value=9.3e-16 Score=122.41 Aligned_cols=93 Identities=18% Similarity=0.240 Sum_probs=71.4
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEeCCCHH------------HHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCC
Q 044553 72 IHPRVVPAIKSAHALGCELRIVSDANLF------------FIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFT 139 (275)
Q Consensus 72 ~~pg~~e~L~~L~~~g~~~~IvS~~~~~------------~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~ 139 (275)
++||+.++|+.|+++|++++|+||++.. .++.+++++|+.. +.+++.+.. ...||.|
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~--~~ii~~~~~------~~~KP~p--- 111 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI--QVLAATHAG------LYRKPMT--- 111 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE--EEEEecCCC------CCCCCcc---
Confidence 6899999999999999999999998763 5788899999853 455544321 1346654
Q ss_pred CCCCCCCcCCCCCchHHHHHHHHHhhh--cCCCCeEEEEcCCC--------CCcccccccCCC
Q 044553 140 KCSHGCNLCPPNMCKGVVIERIQASLS--KEGNKKIIYLGDGS--------GDYCPSLKLSEG 192 (275)
Q Consensus 140 ~~~~~~~~~~~~~~K~~~l~~~~~~~~--~~~~~~~i~vGDs~--------~Di~~a~~~~~~ 192 (275)
..++.++.+++ .. +++++||||+. +|+.+|+++|..
T Consensus 112 ----------------~~~~~~~~~~~~~~~-~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~ 157 (166)
T TIGR01664 112 ----------------GMWEYLQSQYNSPIK-MTRSFYVGDAAGRKLDFSDADIKFAKNLGLE 157 (166)
T ss_pred ----------------HHHHHHHHHcCCCCC-chhcEEEECCCCCCCCCchhHHHHHHHCCCC
Confidence 56777777776 44 58999999996 599999887764
No 71
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=99.61 E-value=1.5e-15 Score=116.11 Aligned_cols=117 Identities=16% Similarity=0.150 Sum_probs=85.5
Q ss_pred hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCc
Q 044553 68 KRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNL 147 (275)
Q Consensus 68 ~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~ 147 (275)
....++|++.++|+.|+++|++++|+||+....++..++.+|+..+|+.+++........+.... ......
T Consensus 21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~---------~~~~~~ 91 (139)
T cd01427 21 EELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGL---------FLGGGP 91 (139)
T ss_pred ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhcccccc---------cccccc
Confidence 56789999999999999999999999999999999999999998888888876543211000000 000111
Q ss_pred CCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCe
Q 044553 148 CPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDH 194 (275)
Q Consensus 148 ~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~ 194 (275)
+.....|...++.+...++.. ++++++|||+.+|+.++..++...+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~igD~~~d~~~~~~~g~~~i 137 (139)
T cd01427 92 FDIGKPNPDKLLAALKLLGVD-PEEVLMVGDSLNDIEMAKAAGGLGV 137 (139)
T ss_pred cccCCCCHHHHHHHHHHcCCC-hhhEEEeCCCHHHHHHHHHcCCcee
Confidence 122344677777777776554 5899999999999999977666544
No 72
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=99.57 E-value=3.6e-14 Score=117.60 Aligned_cols=103 Identities=11% Similarity=0.038 Sum_probs=74.3
Q ss_pred CCCCCCHHHHHH-HHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcC
Q 044553 70 IPIHPRVVPAIK-SAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLC 148 (275)
Q Consensus 70 ~~~~pg~~e~L~-~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~ 148 (275)
..++|++.++|+ .++++|++++|+||++...++.+++..++... +.++|++..+...|.+.+.+ |
T Consensus 93 ~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~-~~~i~t~le~~~gg~~~g~~----------c--- 158 (210)
T TIGR01545 93 VTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHR-LNLIASQIERGNGGWVLPLR----------C--- 158 (210)
T ss_pred CCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccccc-CcEEEEEeEEeCCceEcCcc----------C---
Confidence 468999999996 78889999999999999999999998766332 45777776553223332211 1
Q ss_pred CCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCC
Q 044553 149 PPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 149 ~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
-+..|...++++... ..+.++++|||.+|+.+...++.
T Consensus 159 -~g~~Kv~rl~~~~~~----~~~~~~aYsDS~~D~pmL~~a~~ 196 (210)
T TIGR01545 159 -LGHEKVAQLEQKIGS----PLKLYSGYSDSKQDNPLLAFCEH 196 (210)
T ss_pred -CChHHHHHHHHHhCC----ChhheEEecCCcccHHHHHhCCC
Confidence 134488888877742 24678999999999987754443
No 73
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.56 E-value=4.6e-14 Score=117.02 Aligned_cols=171 Identities=15% Similarity=0.169 Sum_probs=116.6
Q ss_pred CceEEEEEcCCcccCCcc-----HHHHHHHhCCC-hH------HH-hh------------cC-CCChHHHHHHHHHHHHh
Q 044553 2 SGIVVIFDFDKTIIDCDS-----DNFVVDELGAT-DL------FN-QL------------LP-TMPWNSLMDRMMKELHS 55 (275)
Q Consensus 2 ~~~~viFD~DGTL~d~~~-----~~~~~~~~g~~-~~------~~-~~------------~~-~~~~~~~~~~~~~~~~~ 55 (275)
..|+|+||++|||+.... +..+.+.+|++ .. .. .+ .. .+.+.+.+..++.....
T Consensus 6 ~iravtfD~~~tLl~~~~~~~~~y~~i~~~~gl~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~l~~~~ww~~lv~~~f~ 85 (237)
T KOG3085|consen 6 RIRAVTFDAGGTLLATLPPVMEVYCEIAEAYGLEYDDSLIETIFRKDFKKMSEKGPFFGLYSGELTLSQWWPKLVESTFG 85 (237)
T ss_pred ceEEEEEeCCCceeecCCccHHHHHHHHHHhCCCCCHHHHhHhhhHHHHhhcccCCcccccCCcccHHHHHHHHHHHHhc
Confidence 478999999999997532 35577777876 11 00 01 01 12334444444443322
Q ss_pred C-CCC-HHHHHH-----HH-----hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCc
Q 044553 56 Q-GKT-IEDIVE-----VL-----KRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGF 123 (275)
Q Consensus 56 ~-~~~-~~~~~~-----~~-----~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~ 123 (275)
. +.. .++..+ .+ ....+.+++.+++++||..|..++++||... ..+.++..+|+..+||.++.+-..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~lq~lR~~g~~l~iisN~d~-r~~~~l~~~~l~~~fD~vv~S~e~ 164 (237)
T KOG3085|consen 86 KAGIDYEEELLENFSFRLFSTFAPSAWKYLDGMQELLQKLRKKGTILGIISNFDD-RLRLLLLPLGLSAYFDFVVESCEV 164 (237)
T ss_pred cccchhHHHHHhhhhhheeccccccCceeccHHHHHHHHHHhCCeEEEEecCCcH-HHHHHhhccCHHHhhhhhhhhhhh
Confidence 2 222 122221 11 1355678899999999999999999999765 556888899999999988754432
Q ss_pred cCCCCceeecccCCCCCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCC-CCCcccccccCCCCeEeecC
Q 044553 124 VDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDG-SGDYCPSLKLSEGDHVMPRK 199 (275)
Q Consensus 124 ~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs-~~Di~~a~~~~~~~~~~~~~ 199 (275)
- ..||+| ++++..+...+.. |++|++|||+ .||+.+|+.+|+..+.+...
T Consensus 165 g------~~KPDp-------------------~If~~al~~l~v~-Pee~vhIgD~l~nD~~gA~~~G~~ailv~~~ 215 (237)
T KOG3085|consen 165 G------LEKPDP-------------------RIFQLALERLGVK-PEECVHIGDLLENDYEGARNLGWHAILVDNS 215 (237)
T ss_pred c------cCCCCh-------------------HHHHHHHHHhCCC-hHHeEEecCccccccHhHHHcCCEEEEEccc
Confidence 1 347776 7788888877665 6999999999 78999999999988887644
No 74
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=99.54 E-value=8.6e-14 Score=114.91 Aligned_cols=173 Identities=12% Similarity=0.058 Sum_probs=119.7
Q ss_pred ceEEEEEcCCcccCCccH-----HHHHHHhCCChHH--HhhcCCCChHHHHHHHHHHHHhCCCCHHHHH--------HHH
Q 044553 3 GIVVIFDFDKTIIDCDSD-----NFVVDELGATDLF--NQLLPTMPWNSLMDRMMKELHSQGKTIEDIV--------EVL 67 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~~-----~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~ 67 (275)
..+++||+||||+|++.. ..++..+|.+... .....+..-.+..+.++.. .....+.+++. +..
T Consensus 10 ~~~~lfD~dG~lvdte~~y~~~~~~~~~~ygk~~~~~~~~~~mG~~~~eaa~~~~~~-~~dp~s~ee~~~e~~~~~~~~~ 88 (222)
T KOG2914|consen 10 VSACLFDMDGTLVDTEDLYTEAWQELLDRYGKPYPWDVKVKSMGKRTSEAARLFVKK-LPDPVSREEFNKEEEEILDRLF 88 (222)
T ss_pred eeeEEEecCCcEEecHHHHHHHHHHHHHHcCCCChHHHHHHHcCCCHHHHHHHHHhh-cCCCCCHHHHHHHHHHHHHHhc
Confidence 568999999999999763 5677788864222 2222233333444444311 12234455443 234
Q ss_pred hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcC-CcCCcceEecCCCccCCCCceeecccCCCCCCCCCCC
Q 044553 68 KRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLG-IRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCN 146 (275)
Q Consensus 68 ~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~g-l~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~ 146 (275)
....+.||+..++..|+.+|++++++|++.+...+...++++ +-..|+.++..+.. -...+||+|+
T Consensus 89 ~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~f~~~v~~d~~----~v~~gKP~Pd--------- 155 (222)
T KOG2914|consen 89 MNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKNFSHVVLGDDP----EVKNGKPDPD--------- 155 (222)
T ss_pred cccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHhcCCCeecCCc----cccCCCCCch---------
Confidence 557899999999999999999999999999999999998876 66777776663321 1235688885
Q ss_pred cCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecC
Q 044553 147 LCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK 199 (275)
Q Consensus 147 ~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~ 199 (275)
++-.....++..+++.|+++.|+...+.+|+++|+..++++..
T Consensus 156 ----------i~l~A~~~l~~~~~~k~lVfeds~~Gv~aa~aagm~vi~v~~~ 198 (222)
T KOG2914|consen 156 ----------IYLKAAKRLGVPPPSKCLVFEDSPVGVQAAKAAGMQVVGVATP 198 (222)
T ss_pred ----------HHHHHHHhcCCCCccceEEECCCHHHHHHHHhcCCeEEEecCC
Confidence 2233344444433489999999999999999999988887763
No 75
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=99.54 E-value=3e-14 Score=118.49 Aligned_cols=105 Identities=18% Similarity=0.196 Sum_probs=85.2
Q ss_pred cCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHc---CCcCCcceEecCCCccCCCCceeecccCCCCCCCCCC
Q 044553 69 RIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHL---GIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGC 145 (275)
Q Consensus 69 ~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~---gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~ 145 (275)
+..++||+.++|++|+++|++++|+||++...++.++++. ++.++|+.++... . ..||.|
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~~fd~~--~------g~KP~p--------- 155 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSGYFDTT--V------GLKTEA--------- 155 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcceEEEeC--c------ccCCCH---------
Confidence 3579999999999999999999999999999889888886 6777777665321 1 136655
Q ss_pred CcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCc
Q 044553 146 NLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNF 201 (275)
Q Consensus 146 ~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~ 201 (275)
+.+..++.+++.. |++++||||+..|+.+|+++|+..+.+.|.+.
T Consensus 156 ----------~~y~~i~~~lgv~-p~e~lfVgDs~~Di~AA~~AG~~ti~v~r~g~ 200 (220)
T TIGR01691 156 ----------QSYVKIAGQLGSP-PREILFLSDIINELDAARKAGLHTGQLVRPGN 200 (220)
T ss_pred ----------HHHHHHHHHhCcC-hhHEEEEeCCHHHHHHHHHcCCEEEEEECCCC
Confidence 5667777777655 58999999999999999999998888887764
No 76
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=99.54 E-value=3.1e-14 Score=125.72 Aligned_cols=111 Identities=21% Similarity=0.303 Sum_probs=81.0
Q ss_pred hcCCCCCCHHHHHHHHHHcCCcEEEEeCC---------------CHHHHHHHHHHcCCcCCcceEecCCCccCCCCceee
Q 044553 68 KRIPIHPRVVPAIKSAHALGCELRIVSDA---------------NLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRI 132 (275)
Q Consensus 68 ~~~~~~pg~~e~L~~L~~~g~~~~IvS~~---------------~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~ 132 (275)
.+..++||+.++|++|+++|++++|+||+ +...+..+++.+|+. |+.++.+....
T Consensus 27 ~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~--fd~i~i~~~~~-------- 96 (354)
T PRK05446 27 DKLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIK--FDEVLICPHFP-------- 96 (354)
T ss_pred ccceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCc--eeeEEEeCCcC--------
Confidence 45789999999999999999999999995 345677788888884 66554321100
Q ss_pred cccCCCCCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCc
Q 044553 133 FPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNF 201 (275)
Q Consensus 133 kp~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~ 201 (275)
.+.|.++++|..++..++.+++.. +++++||||+.+|+.+|+.+|+..+++.+...
T Consensus 97 ------------sd~~~~rKP~p~~l~~a~~~l~v~-~~~svmIGDs~sDi~aAk~aGi~~I~v~~~~~ 152 (354)
T PRK05446 97 ------------EDNCSCRKPKTGLVEEYLAEGAID-LANSYVIGDRETDVQLAENMGIKGIRYARETL 152 (354)
T ss_pred ------------cccCCCCCCCHHHHHHHHHHcCCC-cccEEEEcCCHHHHHHHHHCCCeEEEEECCCC
Confidence 000112233567888887776654 58999999999999999999998887755433
No 77
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=99.54 E-value=2.3e-14 Score=109.60 Aligned_cols=85 Identities=14% Similarity=0.203 Sum_probs=69.8
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCC-CHHHHHHHHHHcC-------CcCCcceEecCCCccCCCCceeecccCCCCCCC
Q 044553 71 PIHPRVVPAIKSAHALGCELRIVSDA-NLFFIETILEHLG-------IRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCS 142 (275)
Q Consensus 71 ~~~pg~~e~L~~L~~~g~~~~IvS~~-~~~~i~~~l~~~g-------l~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~ 142 (275)
.++||+.++|++|+++|++++|+||+ ....+...++.++ +.++|+.+++++. +|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~f~~~~~~~~----------~p-------- 90 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYFDPLTIGYW----------LP-------- 90 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhhhhhhhhcCC----------Cc--------
Confidence 67999999999999999999999999 8888999999988 7888888776532 22
Q ss_pred CCCCcCCCCCchHHHHHHHHHhhh--cCCCCeEEEEcCCCCCccc
Q 044553 143 HGCNLCPPNMCKGVVIERIQASLS--KEGNKKIIYLGDGSGDYCP 185 (275)
Q Consensus 143 ~~~~~~~~~~~K~~~l~~~~~~~~--~~~~~~~i~vGDs~~Di~~ 185 (275)
|++.+..++.+++ .. |++|+||||+..|+..
T Consensus 91 -----------kp~~~~~a~~~lg~~~~-p~~~l~igDs~~n~~~ 123 (128)
T TIGR01681 91 -----------KSPRLVEIALKLNGVLK-PKSILFVDDRPDNNEE 123 (128)
T ss_pred -----------HHHHHHHHHHHhcCCCC-cceEEEECCCHhHHHH
Confidence 4466777777776 54 5899999999988753
No 78
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=99.52 E-value=2.2e-13 Score=109.56 Aligned_cols=176 Identities=16% Similarity=0.175 Sum_probs=122.6
Q ss_pred ceEEEEEcCCcccCCccH----------HHHHHHhCCChHHHhhcCCCChHHHHHHHHHH-HHhCCCCHHHHHHHH----
Q 044553 3 GIVVIFDFDKTIIDCDSD----------NFVVDELGATDLFNQLLPTMPWNSLMDRMMKE-LHSQGKTIEDIVEVL---- 67 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~~----------~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---- 67 (275)
.+.++||+|.||+..++- ..+.+++|+++.....+...-+..+--.+... ..+...+.+++.+++
T Consensus 15 ~~~l~FDiDdtLYp~St~i~~~~~~nI~~f~~eklgi~~e~a~~L~~~~yk~YG~t~aGL~~~~~~~d~deY~~~V~~~L 94 (244)
T KOG3109|consen 15 YKCLFFDIDDTLYPLSTGIQLMMRNNIQEFFVEKLGISEEEAEELRESLYKEYGLTMAGLKAVGYIFDADEYHRFVHGRL 94 (244)
T ss_pred ceEEEEecccccccCchhHHHHHHHHHHHHHHHHhCCChhhhHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHHHhhccC
Confidence 478999999999998652 45666777764332221110011111111111 112233467776654
Q ss_pred --hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCC
Q 044553 68 --KRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGC 145 (275)
Q Consensus 68 --~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~ 145 (275)
+.+.|.+-.+.+|-.|+.++ ..+.||+....+.++|+++|+.+.|+.|+|.+..-...-.+.-||.
T Consensus 95 Plq~LkPD~~LRnlLL~l~~r~--k~~FTNa~k~HA~r~Lk~LGieDcFegii~~e~~np~~~~~vcKP~---------- 162 (244)
T KOG3109|consen 95 PLQDLKPDPVLRNLLLSLKKRR--KWIFTNAYKVHAIRILKKLGIEDCFEGIICFETLNPIEKTVVCKPS---------- 162 (244)
T ss_pred cHhhcCCCHHHHHHHHhCcccc--EEEecCCcHHHHHHHHHHhChHHhccceeEeeccCCCCCceeecCC----------
Confidence 34788889999999999764 8899999999999999999999999999987643100011222443
Q ss_pred CcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecC
Q 044553 146 NLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK 199 (275)
Q Consensus 146 ~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~ 199 (275)
.++++......++..|.+++++.||.+.|.+|+.+|+..+++.+.
T Consensus 163 ---------~~afE~a~k~agi~~p~~t~FfDDS~~NI~~ak~vGl~tvlv~~~ 207 (244)
T KOG3109|consen 163 ---------EEAFEKAMKVAGIDSPRNTYFFDDSERNIQTAKEVGLKTVLVGRE 207 (244)
T ss_pred ---------HHHHHHHHHHhCCCCcCceEEEcCchhhHHHHHhccceeEEEEee
Confidence 378888888888876789999999999999999999998887765
No 79
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=99.52 E-value=5.3e-14 Score=117.93 Aligned_cols=96 Identities=11% Similarity=-0.004 Sum_probs=74.0
Q ss_pred cCCCCCCHHHHHHHHHHcCCcEEEEeCC----CHHHHHHHHHHcCC--cCCcceEecCCCccCCCCceeecccCCCCCCC
Q 044553 69 RIPIHPRVVPAIKSAHALGCELRIVSDA----NLFFIETILEHLGI--RDCFSEINTNPGFVDEEGRLRIFPFHDFTKCS 142 (275)
Q Consensus 69 ~~~~~pg~~e~L~~L~~~g~~~~IvS~~----~~~~i~~~l~~~gl--~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~ 142 (275)
...|+||+.++|+.|+++|++++++||+ ....++.+++.+|+ .++|+.+++.+.. .||.
T Consensus 112 ~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~--------~K~~------- 176 (237)
T PRK11009 112 FSIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKP--------GQYT------- 176 (237)
T ss_pred cCcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCC--------CCCC-------
Confidence 4778999999999999999999999995 45678888888999 8888888875531 2332
Q ss_pred CCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecC
Q 044553 143 HGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK 199 (275)
Q Consensus 143 ~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~ 199 (275)
|...+ .++ .-++||||+.+|+.+|+++|...+.+.++
T Consensus 177 -----------K~~~l----~~~-----~i~I~IGDs~~Di~aA~~AGi~~I~v~~G 213 (237)
T PRK11009 177 -----------KTQWL----KKK-----NIRIFYGDSDNDITAAREAGARGIRILRA 213 (237)
T ss_pred -----------HHHHH----Hhc-----CCeEEEcCCHHHHHHHHHcCCcEEEEecC
Confidence 33322 232 35899999999999999999887776554
No 80
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=99.47 E-value=1.6e-13 Score=110.08 Aligned_cols=95 Identities=17% Similarity=0.144 Sum_probs=74.7
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCC-HHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDAN-LFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLC 148 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~-~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~ 148 (275)
..++|++.++|++|+++|++++|+||++ ...+..+++.+|+..+ .. ..||.|
T Consensus 42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~-----~~----------~~KP~p------------ 94 (170)
T TIGR01668 42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVL-----PH----------AVKPPG------------ 94 (170)
T ss_pred CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEE-----cC----------CCCCCh------------
Confidence 4578999999999999999999999998 6777777788776421 10 236654
Q ss_pred CCCCchHHHHHHHHHhhhcCCCCeEEEEcCCC-CCcccccccCCCCeEeecC
Q 044553 149 PPNMCKGVVIERIQASLSKEGNKKIIYLGDGS-GDYCPSLKLSEGDHVMPRK 199 (275)
Q Consensus 149 ~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~~~~~~~~~~~ 199 (275)
.+++.++.+++.. +++++||||+. +|+.+|+++|+..+++..+
T Consensus 95 -------~~~~~~l~~~~~~-~~~~l~IGDs~~~Di~aA~~aGi~~i~v~~g 138 (170)
T TIGR01668 95 -------CAFRRAHPEMGLT-SEQVAVVGDRLFTDVMGGNRNGSYTILVEPL 138 (170)
T ss_pred -------HHHHHHHHHcCCC-HHHEEEECCcchHHHHHHHHcCCeEEEEccC
Confidence 6777777777655 58999999997 7999999999877766544
No 81
>PRK08238 hypothetical protein; Validated
Probab=99.45 E-value=1.4e-12 Score=120.15 Aligned_cols=148 Identities=16% Similarity=0.239 Sum_probs=94.7
Q ss_pred ceEEEEEcCCcccCCccHHHHHHH-hCCChHHHhhcC--CCChHHHHHHHHHHHHhCCCCHHHHHHHHhcCCCCCCHHHH
Q 044553 3 GIVVIFDFDKTIIDCDSDNFVVDE-LGATDLFNQLLP--TMPWNSLMDRMMKELHSQGKTIEDIVEVLKRIPIHPRVVPA 79 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~~~~~~~~-~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~ 79 (275)
...++||+||||+.+++....+.. +...+...-... -..+....++.+.... +.+. ...+++||+.++
T Consensus 10 ~~pl~~DlDgTLi~td~l~e~~~~~l~~~p~~~~~l~~~~~~g~a~lK~~~a~~~--~~d~-------~~lp~~pga~e~ 80 (479)
T PRK08238 10 DLPLVVDLDGTLIRTDLLHESIFALLRRNPLALLRLPLWLLRGKAALKRRLARRV--DLDV-------ATLPYNEEVLDY 80 (479)
T ss_pred CCCEEEeCCCCccccchHHHHHHHHHHhChHHHHHHHHHHHhcHHHHHHHHHhhc--CCCh-------hhCCCChhHHHH
Confidence 457899999999999986443322 322221110000 0001111111111110 1111 335678999999
Q ss_pred HHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchHHHHH
Q 044553 80 IKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIE 159 (275)
Q Consensus 80 L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~l~ 159 (275)
+++++++|++++|+|+++...++.+++++|+ ||.+++++... ..||.+ |.+.+.
T Consensus 81 L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl---Fd~Vigsd~~~------~~kg~~-----------------K~~~l~ 134 (479)
T PRK08238 81 LRAERAAGRKLVLATASDERLAQAVAAHLGL---FDGVFASDGTT------NLKGAA-----------------KAAALV 134 (479)
T ss_pred HHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC---CCEEEeCCCcc------ccCCch-----------------HHHHHH
Confidence 9999999999999999999999999999998 88999877532 223222 555555
Q ss_pred HHHHhhhcCCCCeEEEEcCCCCCcccccccCC
Q 044553 160 RIQASLSKEGNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 160 ~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
+... .++++|+|||.+|+.++..++.
T Consensus 135 ~~l~------~~~~~yvGDS~~Dlp~~~~A~~ 160 (479)
T PRK08238 135 EAFG------ERGFDYAGNSAADLPVWAAARR 160 (479)
T ss_pred HHhC------ccCeeEecCCHHHHHHHHhCCC
Confidence 4332 2458999999999999877663
No 82
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=99.44 E-value=1.6e-13 Score=111.94 Aligned_cols=96 Identities=23% Similarity=0.235 Sum_probs=68.9
Q ss_pred CCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCC-CceeecccCCCCCCCCCCCcCCCCC
Q 044553 74 PRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEE-GRLRIFPFHDFTKCSHGCNLCPPNM 152 (275)
Q Consensus 74 pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~-g~~~~kp~~~~~~~~~~~~~~~~~~ 152 (275)
|++.++|++++++|++++|+|+++..+++.+++.+|+... .++++.. ++.. +...++..+. .++
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~--~v~~~~~-~~~~~~~~~~~~~~~-----------~~~- 156 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDD--NVIGNEL-FDNGGGIFTGRITGS-----------NCG- 156 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEG--GEEEEEE-ECTTCCEEEEEEEEE-----------EES-
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCce--EEEEEee-eecccceeeeeECCC-----------CCC-
Confidence 4444999999999999999999999999999999998743 4666665 4333 2223332221 011
Q ss_pred chHHHHHHH---HHhhhcCCCCeEEEEcCCCCCcccc
Q 044553 153 CKGVVIERI---QASLSKEGNKKIIYLGDGSGDYCPS 186 (275)
Q Consensus 153 ~K~~~l~~~---~~~~~~~~~~~~i~vGDs~~Di~~a 186 (275)
+|..+++.+ ... .. ++..+++||||.+|+.++
T Consensus 157 ~K~~~l~~~~~~~~~-~~-~~~~~~~iGDs~~D~~~l 191 (192)
T PF12710_consen 157 GKAEALKELYIRDEE-DI-DPDRVIAIGDSINDLPML 191 (192)
T ss_dssp HHHHHHHHHHHHHHH-TH-TCCEEEEEESSGGGHHHH
T ss_pred cHHHHHHHHHHHhhc-CC-CCCeEEEEECCHHHHHHh
Confidence 499999999 222 22 257999999999999764
No 83
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.42 E-value=1.7e-13 Score=108.18 Aligned_cols=83 Identities=20% Similarity=0.274 Sum_probs=68.1
Q ss_pred HHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchHHHH
Q 044553 79 AIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVI 158 (275)
Q Consensus 79 ~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~l 158 (275)
+|++|+++|++++|+||++...+...++++|+..+|+.. +| |...+
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~~~~~---------------~~-------------------k~~~~ 81 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHLYQGQ---------------SN-------------------KLIAF 81 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEEEecc---------------cc-------------------hHHHH
Confidence 899999999999999999999999999999998664310 12 56788
Q ss_pred HHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEee
Q 044553 159 ERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMP 197 (275)
Q Consensus 159 ~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~ 197 (275)
++++.+++.. +++|+||||+.+|+.+++.+|.. +++.
T Consensus 82 ~~~~~~~~~~-~~~~~~vGDs~~D~~~~~~ag~~-~~v~ 118 (154)
T TIGR01670 82 SDILEKLALA-PENVAYIGDDLIDWPVMEKVGLS-VAVA 118 (154)
T ss_pred HHHHHHcCCC-HHHEEEECCCHHHHHHHHHCCCe-EecC
Confidence 8888887755 48999999999999999887764 5443
No 84
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=99.40 E-value=2.1e-12 Score=102.97 Aligned_cols=109 Identities=17% Similarity=0.170 Sum_probs=85.4
Q ss_pred hcCCCCCCHHHHHHHHHHcCCcEEEEeCCC---------------HHHHHHHHHHcCCcCCcceEecCCCccCCCCceee
Q 044553 68 KRIPIHPRVVPAIKSAHALGCELRIVSDAN---------------LFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRI 132 (275)
Q Consensus 68 ~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~---------------~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~ 132 (275)
..+.+.||+.+.+..|++.||+++|+||.+ +..+...|+..|. .|+.|+.+.
T Consensus 28 ~~~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~gv--~id~i~~Cp----------- 94 (181)
T COG0241 28 DDFQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQGV--KIDGILYCP----------- 94 (181)
T ss_pred HHhccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHcCC--ccceEEECC-----------
Confidence 457789999999999999999999999942 3335555666665 366666433
Q ss_pred cccCCCCCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecC
Q 044553 133 FPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK 199 (275)
Q Consensus 133 kp~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~ 199 (275)
++ +...|.|+++|...+.+++.+++.. +++.++|||..+|+.+|.++|..++.+.++
T Consensus 95 --h~-------p~~~c~cRKP~~gm~~~~~~~~~iD-~~~s~~VGD~~~Dlq~a~n~gi~~~~~~~~ 151 (181)
T COG0241 95 --HH-------PEDNCDCRKPKPGMLLSALKEYNID-LSRSYVVGDRLTDLQAAENAGIKGVLVLTG 151 (181)
T ss_pred --CC-------CCCCCcccCCChHHHHHHHHHhCCC-ccceEEecCcHHHHHHHHHCCCCceEEEcC
Confidence 22 2333889999999999999999866 589999999999999999999987776654
No 85
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=99.38 E-value=1.1e-12 Score=114.70 Aligned_cols=107 Identities=21% Similarity=0.148 Sum_probs=81.8
Q ss_pred cCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcC-CcceEecCCCcc---CCCCceeecccCCCCCCCCC
Q 044553 69 RIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRD-CFSEINTNPGFV---DEEGRLRIFPFHDFTKCSHG 144 (275)
Q Consensus 69 ~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~-~fd~i~~~~~~~---~~~g~~~~kp~~~~~~~~~~ 144 (275)
...++|++.++|+.|+++|++++++||++....+..++.+++.. +|+.+++.+... ...+ ..||+|
T Consensus 185 ~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i~~~~~~~~~~~~~~--~~kp~p-------- 254 (300)
T PHA02530 185 EDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDLIGRPPDMHFQREQG--DKRPDD-------- 254 (300)
T ss_pred cCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhhhCCcchhhhcccCC--CCCCcH--------
Confidence 46789999999999999999999999999999999999999986 899888876210 0001 235544
Q ss_pred CCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEe
Q 044553 145 CNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVM 196 (275)
Q Consensus 145 ~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~ 196 (275)
..+...+.+.....+++|+||||+.+|+.+|+++|...+.+
T Consensus 255 -----------~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v 295 (300)
T PHA02530 255 -----------VVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECWQV 295 (300)
T ss_pred -----------HHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEEEe
Confidence 34444444443323589999999999999999988766655
No 86
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=99.37 E-value=3.8e-13 Score=105.46 Aligned_cols=90 Identities=13% Similarity=0.079 Sum_probs=69.4
Q ss_pred cCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcC-CcceEecCCCccCCCCceeecccCCCCCCCCCCCc
Q 044553 69 RIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRD-CFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNL 147 (275)
Q Consensus 69 ~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~-~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~ 147 (275)
.+.++||+.++|++|+ ++++++|+|++...+++.+++++++.. +|+.|++.+... ..||.
T Consensus 43 ~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~~i~~~~d~~------~~KP~------------ 103 (148)
T smart00577 43 YVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECV------FVKGK------------ 103 (148)
T ss_pred EEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCEeeeEEECcccc------ccCCe------------
Confidence 4678999999999998 579999999999999999999999965 468888876543 33442
Q ss_pred CCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccc
Q 044553 148 CPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLK 188 (275)
Q Consensus 148 ~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~ 188 (275)
+.+.+..++.. +++|+||||+.+|+.++..
T Consensus 104 ----------~~k~l~~l~~~-p~~~i~i~Ds~~~~~aa~~ 133 (148)
T smart00577 104 ----------YVKDLSLLGRD-LSNVIIIDDSPDSWPFHPE 133 (148)
T ss_pred ----------EeecHHHcCCC-hhcEEEEECCHHHhhcCcc
Confidence 11222333333 6899999999999998854
No 87
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=99.33 E-value=9.1e-12 Score=96.35 Aligned_cols=93 Identities=15% Similarity=0.179 Sum_probs=77.0
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCP 149 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~ 149 (275)
....|.+.+.+..+++.|+++.|+||.....+...++++|++ .|+. ..||.+
T Consensus 45 ~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~----fi~~-----------A~KP~~------------- 96 (175)
T COG2179 45 PDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVP----FIYR-----------AKKPFG------------- 96 (175)
T ss_pred CCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCc----eeec-----------ccCccH-------------
Confidence 445678889999999999999999999999999999999985 4553 236655
Q ss_pred CCCchHHHHHHHHHhhhcCCCCeEEEEcCC-CCCcccccccCCCCeEee
Q 044553 150 PNMCKGVVIERIQASLSKEGNKKIIYLGDG-SGDYCPSLKLSEGDHVMP 197 (275)
Q Consensus 150 ~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs-~~Di~~a~~~~~~~~~~~ 197 (275)
..+.+++.+++.. +++|+||||. -+|+.++.++|...+.+.
T Consensus 97 ------~~fr~Al~~m~l~-~~~vvmVGDqL~TDVlggnr~G~~tIlV~ 138 (175)
T COG2179 97 ------RAFRRALKEMNLP-PEEVVMVGDQLFTDVLGGNRAGMRTILVE 138 (175)
T ss_pred ------HHHHHHHHHcCCC-hhHEEEEcchhhhhhhcccccCcEEEEEE
Confidence 6788888888776 5899999999 799999999888776654
No 88
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=99.32 E-value=3.6e-12 Score=117.99 Aligned_cols=93 Identities=17% Similarity=0.260 Sum_probs=70.6
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEeCCCH------------HHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCC
Q 044553 72 IHPRVVPAIKSAHALGCELRIVSDANL------------FFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFT 139 (275)
Q Consensus 72 ~~pg~~e~L~~L~~~g~~~~IvS~~~~------------~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~ 139 (275)
++||+.+.|+.|++.||+++|+||.+. ..+..+++++|+. |+.+++.+.. ...||.|
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip--fdviia~~~~------~~RKP~p--- 266 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP--FQVFIAIGAG------FYRKPLT--- 266 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc--eEEEEeCCCC------CCCCCCH---
Confidence 589999999999999999999999766 4588899999985 7877765431 1335544
Q ss_pred CCCCCCCcCCCCCchHHHHHHHHHhhh---cCCCCeEEEEcCCCCCcccccccCC
Q 044553 140 KCSHGCNLCPPNMCKGVVIERIQASLS---KEGNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 140 ~~~~~~~~~~~~~~K~~~l~~~~~~~~---~~~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
..+..++..++ ...+++++||||+..|+.+++++|.
T Consensus 267 ----------------Gm~~~a~~~~~~~~~Id~~~S~~VGDaagr~~~g~~ag~ 305 (526)
T TIGR01663 267 ----------------GMWDHLKEEANDGTEIQEDDCFFVGDAAGRPANGKAAGK 305 (526)
T ss_pred ----------------HHHHHHHHhcCcccCCCHHHeEEeCCcccchHHHHhcCC
Confidence 66777776663 1235899999999999977665554
No 89
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=99.32 E-value=2.3e-12 Score=104.66 Aligned_cols=80 Identities=19% Similarity=0.273 Sum_probs=66.2
Q ss_pred HHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchHHH
Q 044553 78 PAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVV 157 (275)
Q Consensus 78 e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~ 157 (275)
..++.|+++|++++|+||.+...+..+++.+|+..+|+ +. + .|...
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~f~---g~------------~-------------------~k~~~ 100 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHLYQ---GQ------------S-------------------NKLIA 100 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCceeec---CC------------C-------------------cHHHH
Confidence 36788888999999999999999999999999876653 10 0 16688
Q ss_pred HHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCC
Q 044553 158 IERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEG 192 (275)
Q Consensus 158 l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~ 192 (275)
++.++.+++.. +++++||||+.+|+.+++.+|..
T Consensus 101 l~~~~~~~gl~-~~ev~~VGDs~~D~~~a~~aG~~ 134 (183)
T PRK09484 101 FSDLLEKLAIA-PEQVAYIGDDLIDWPVMEKVGLS 134 (183)
T ss_pred HHHHHHHhCCC-HHHEEEECCCHHHHHHHHHCCCe
Confidence 88898888765 58999999999999999887765
No 90
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.31 E-value=3.1e-13 Score=111.97 Aligned_cols=90 Identities=23% Similarity=0.260 Sum_probs=67.9
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCP 149 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~ 149 (275)
.+++|++.++|+.|++.|++++++|+.....+..+.+.+|+.+ .++.+... +||.+
T Consensus 126 d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~---~~v~a~~~--------~kP~~------------- 181 (215)
T PF00702_consen 126 DPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD---SIVFARVI--------GKPEP------------- 181 (215)
T ss_dssp EEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS---EEEEESHE--------TTTHH-------------
T ss_pred CcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc---cccccccc--------ccccc-------------
Confidence 4688999999999999999999999999999999999999943 23322210 36654
Q ss_pred CCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccC
Q 044553 150 PNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLS 190 (275)
Q Consensus 150 ~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~ 190 (275)
| ++.++.+.++.. +.+|+||||+.||+.++++++
T Consensus 182 ----k--~~~~~i~~l~~~-~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 182 ----K--IFLRIIKELQVK-PGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp ----H--HHHHHHHHHTCT-GGGEEEEESSGGHHHHHHHSS
T ss_pred ----h--hHHHHHHHHhcC-CCEEEEEccCHHHHHHHHhCc
Confidence 4 444444444433 369999999999999886653
No 91
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=99.30 E-value=3.9e-12 Score=101.50 Aligned_cols=78 Identities=14% Similarity=0.183 Sum_probs=64.2
Q ss_pred HHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchHHHH
Q 044553 79 AIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVI 158 (275)
Q Consensus 79 ~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~l 158 (275)
.+..|+++|++++|+||+....++..++++|+..+|+.+ || |+..+
T Consensus 42 ~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~f~~~---------------kp-------------------kp~~~ 87 (169)
T TIGR02726 42 GVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRFHEGI---------------KK-------------------KTEPY 87 (169)
T ss_pred HHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEEEecC---------------CC-------------------CHHHH
Confidence 577788999999999999999999999999998776521 23 45778
Q ss_pred HHHHHhhhcCCCCeEEEEcCCCCCcccccccCC
Q 044553 159 ERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 159 ~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
+.++..++.. +++++||||+.+|+.+++.+|.
T Consensus 88 ~~~~~~l~~~-~~ev~~iGD~~nDi~~~~~ag~ 119 (169)
T TIGR02726 88 AQMLEEMNIS-DAEVCYVGDDLVDLSMMKRVGL 119 (169)
T ss_pred HHHHHHcCcC-HHHEEEECCCHHHHHHHHHCCC
Confidence 8888887655 4899999999999999976553
No 92
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=99.27 E-value=3.1e-11 Score=102.75 Aligned_cols=108 Identities=18% Similarity=0.184 Sum_probs=73.8
Q ss_pred CCCC-CCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCC---------CC
Q 044553 70 IPIH-PRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHD---------FT 139 (275)
Q Consensus 70 ~~~~-pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~---------~~ 139 (275)
+++. ||+.++|++|+++|++++|+||+.+..+...++++|+..+|+.|++++... ..||.++ |.
T Consensus 144 v~irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv~------~~kp~~e~~d~~~~~~~~ 217 (301)
T TIGR01684 144 VRIRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHKA------EEYSTMSTEDRQYRYVFT 217 (301)
T ss_pred cccCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCccc------cCCCCccccccccceEEe
Confidence 4444 999999999999999999999999999999999999999999999887653 3344442 22
Q ss_pred CCCCCCCc-CCCCCchH-HHHHHHHHhhhcCCCCeEEEEcCC-CCCc
Q 044553 140 KCSHGCNL-CPPNMCKG-VVIERIQASLSKEGNKKIIYLGDG-SGDY 183 (275)
Q Consensus 140 ~~~~~~~~-~~~~~~K~-~~l~~~~~~~~~~~~~~~i~vGDs-~~Di 183 (275)
..++-.+. -..+.+|. +++-.++.+.++.-.+.+-.|.|= .||+
T Consensus 218 ~~~f~~d~~~~~~lPKSprvvl~yL~~~gvn~~KtitLVDDl~~Nn~ 264 (301)
T TIGR01684 218 KTPFYLNTTDGKRLPKSPRVVLWYLYDLGVNYFKSITLVDDLADNNF 264 (301)
T ss_pred cCCeEEeCCCCCcCCCCCeehHHHHHHcCCceeeeEEEeccCcccCc
Confidence 33333332 11223332 455555555554334566677775 4555
No 93
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=99.21 E-value=1.8e-11 Score=107.95 Aligned_cols=88 Identities=17% Similarity=0.241 Sum_probs=74.4
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHH----cCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCC
Q 044553 71 PIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEH----LGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCN 146 (275)
Q Consensus 71 ~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~----~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~ 146 (275)
.++||+.++|+.|+++|++++|+|++....+..++++ +++.++|+.+.++ .||
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~~~~~~-----------~~p------------ 87 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFDARSIN-----------WGP------------ 87 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHeeEEEEe-----------cCc------------
Confidence 3589999999999999999999999999999999999 8998898887643 133
Q ss_pred cCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCccccccc
Q 044553 147 LCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKL 189 (275)
Q Consensus 147 ~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~ 189 (275)
|...+..++.+++.. +++++||||+..|+..++.+
T Consensus 88 -------k~~~i~~~~~~l~i~-~~~~vfidD~~~d~~~~~~~ 122 (320)
T TIGR01686 88 -------KSESLRKIAKKLNLG-TDSFLFIDDNPAERANVKIT 122 (320)
T ss_pred -------hHHHHHHHHHHhCCC-cCcEEEECCCHHHHHHHHHH
Confidence 567888888887765 58999999999999777553
No 94
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=99.21 E-value=1.2e-11 Score=105.88 Aligned_cols=133 Identities=8% Similarity=-0.051 Sum_probs=90.6
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCC
Q 044553 72 IHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPN 151 (275)
Q Consensus 72 ~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~ 151 (275)
.|+++.+.++.|++.+++++|+||.........+..+|+..+|+.+.+.... .....+||.|
T Consensus 121 ~y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g~~~~~i~~~~~~---~~~~~gKP~p--------------- 182 (257)
T TIGR01458 121 SYQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVGPFVTALEYATDT---KATVVGKPSK--------------- 182 (257)
T ss_pred CHHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCchHHHHHHHHHhCC---CceeecCCCH---------------
Confidence 3578888999999889999999998877666666667777777766643221 1122357755
Q ss_pred CchHHHHHHHHHhhhcCCCCeEEEEcCCC-CCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHHHHH
Q 044553 152 MCKGVVIERIQASLSKEGNKKIIYLGDGS-GDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQI 230 (275)
Q Consensus 152 ~~K~~~l~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el~~~ 230 (275)
.+++.++.+++.. +++++||||+. +|+.+|+++|+..+++.++.+..++.... ...+ ...++++.||.++
T Consensus 183 ----~~~~~~~~~~~~~-~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~-~~~p---d~~~~sl~el~~~ 253 (257)
T TIGR01458 183 ----TFFLEALRATGCE-PEEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKI-NVPP---DLTCDSLPHAVDL 253 (257)
T ss_pred ----HHHHHHHHHhCCC-hhhEEEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhccc-CCCC---CEEECCHHHHHHH
Confidence 5666777766544 58999999995 99999999999877775443332222111 1112 2367899999876
Q ss_pred H
Q 044553 231 L 231 (275)
Q Consensus 231 l 231 (275)
+
T Consensus 254 l 254 (257)
T TIGR01458 254 I 254 (257)
T ss_pred H
Confidence 5
No 95
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=99.18 E-value=1.1e-10 Score=98.94 Aligned_cols=85 Identities=20% Similarity=0.159 Sum_probs=64.3
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHH--HHHHHcCCcC-CcceEecCCCccCCCCceeecccCCCCCCCCCCCc
Q 044553 71 PIHPRVVPAIKSAHALGCELRIVSDANLFFIE--TILEHLGIRD-CFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNL 147 (275)
Q Consensus 71 ~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~--~~l~~~gl~~-~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~ 147 (275)
.++||+.++|++|+++|++++++||+++.... ..++++|+.. +|+.|+++....
T Consensus 24 ~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s~~~~----------------------- 80 (242)
T TIGR01459 24 HTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISSGEIA----------------------- 80 (242)
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEccHHHH-----------------------
Confidence 46899999999999999999999999877665 7889999987 899998765421
Q ss_pred CCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccc
Q 044553 148 CPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPS 186 (275)
Q Consensus 148 ~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a 186 (275)
...+.+...+.+.. ++++++|||+..|+...
T Consensus 81 -------~~~l~~~~~~~~~~-~~~~~~vGd~~~d~~~~ 111 (242)
T TIGR01459 81 -------VQMILESKKRFDIR-NGIIYLLGHLENDIINL 111 (242)
T ss_pred -------HHHHHhhhhhccCC-CceEEEeCCcccchhhh
Confidence 12333333333332 46899999998888544
No 96
>PLN02645 phosphoglycolate phosphatase
Probab=99.14 E-value=9e-10 Score=96.82 Aligned_cols=77 Identities=8% Similarity=-0.055 Sum_probs=52.3
Q ss_pred CchHHHHHHHHHhhhcCCCCeEEEEcCCC-CCcccccccCCCCeEeecCCchhhHHHhhC-CCceeEEEeeCCChHHHHH
Q 044553 152 MCKGVVIERIQASLSKEGNKKIIYLGDGS-GDYCPSLKLSEGDHVMPRKNFPLWDLIIRN-PMLIKAEIHEWTDGEELEQ 229 (275)
Q Consensus 152 ~~K~~~l~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~el~~ 229 (275)
+++..+++.++..++.. +++++||||+. +||.+|+++|+..+.+..+.+...++.... ...+ ...++++.+|.+
T Consensus 230 KP~p~~~~~a~~~~~~~-~~~~~~VGD~~~~Di~~A~~aG~~~ilV~~G~~~~~~~~~~~~~~~p---d~~~~~~~~l~~ 305 (311)
T PLN02645 230 KPSTFMMDYLANKFGIE-KSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSESMLLSPENKIQP---DFYTSKISDFLT 305 (311)
T ss_pred CChHHHHHHHHHHcCCC-cccEEEEcCCcHHHHHHHHHcCCCEEEEcCCCCCHHHHHhccCCCCC---CEEECCHHHHHH
Confidence 55667888888777654 58999999996 999999999997776644333333332211 1112 336799999887
Q ss_pred HHH
Q 044553 230 ILL 232 (275)
Q Consensus 230 ~l~ 232 (275)
+++
T Consensus 306 ~~~ 308 (311)
T PLN02645 306 LKA 308 (311)
T ss_pred Hhh
Confidence 665
No 97
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=99.13 E-value=3.9e-11 Score=103.89 Aligned_cols=105 Identities=14% Similarity=0.159 Sum_probs=69.2
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEeCCCHHHH-HHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCC
Q 044553 72 IHPRVVPAIKSAHALGCELRIVSDANLFFI-ETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPP 150 (275)
Q Consensus 72 ~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i-~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~ 150 (275)
.|+++.++++.|+++|+ ++|+||...... ...+...|+..+|+.+.+... ......+||+|
T Consensus 144 ~y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~~~~~~~~~~g~~~~~i~~~~g---~~~~~~gKP~p-------------- 205 (279)
T TIGR01452 144 SYAKLREACAHLREPGC-LFVATNRDPWHPLSDGSRTPGTGSLVAAIETASG---RQPLVVGKPSP-------------- 205 (279)
T ss_pred CHHHHHHHHHHHhcCCC-EEEEeCCCCCCCCcCCCcccChHHHHHHHHHHhC---CceeccCCCCH--------------
Confidence 47889999999998887 789999775432 122233455555555443211 01112457765
Q ss_pred CCchHHHHHHHHHhhhcCCCCeEEEEcCC-CCCcccccccCCCCeEeecCCc
Q 044553 151 NMCKGVVIERIQASLSKEGNKKIIYLGDG-SGDYCPSLKLSEGDHVMPRKNF 201 (275)
Q Consensus 151 ~~~K~~~l~~~~~~~~~~~~~~~i~vGDs-~~Di~~a~~~~~~~~~~~~~~~ 201 (275)
..++.++..++.. +++++||||+ .+||.+|+++|+..+.+ .+|.
T Consensus 206 -----~~~~~~~~~~~~~-~~~~lmIGD~~~tDI~~A~~aGi~si~V-~~G~ 250 (279)
T TIGR01452 206 -----YMFECITENFSID-PARTLMVGDRLETDILFGHRCGMTTVLV-LSGV 250 (279)
T ss_pred -----HHHHHHHHHhCCC-hhhEEEECCChHHHHHHHHHcCCcEEEE-CCCC
Confidence 5666666666554 5899999999 59999999999876655 4444
No 98
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.13 E-value=2.6e-10 Score=95.77 Aligned_cols=42 Identities=14% Similarity=0.237 Sum_probs=35.5
Q ss_pred CCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCC
Q 044553 149 PPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 149 ~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
+.+..|...++.++..++.. ++++++|||+.||+.+...+|.
T Consensus 153 ~~~~~Kg~al~~l~~~~~i~-~~~~i~~GD~~NDi~m~~~ag~ 194 (230)
T PRK01158 153 SPGVNKGTGLKKLAELMGID-PEEVAAIGDSENDLEMFEVAGF 194 (230)
T ss_pred eCCCChHHHHHHHHHHhCCC-HHHEEEECCchhhHHHHHhcCc
Confidence 56778999999999998775 4899999999999999865443
No 99
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=99.12 E-value=8.7e-10 Score=93.98 Aligned_cols=85 Identities=13% Similarity=0.120 Sum_probs=61.3
Q ss_pred hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHH---HHHHHHHHcCCcCC-cceEecCCCccCCCCceeecccCCCCCCCC
Q 044553 68 KRIPIHPRVVPAIKSAHALGCELRIVSDANLF---FIETILEHLGIRDC-FSEINTNPGFVDEEGRLRIFPFHDFTKCSH 143 (275)
Q Consensus 68 ~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~---~i~~~l~~~gl~~~-fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~ 143 (275)
....++||+.++|+.|+++|++++++||+... .....|+.+|+... ++.++..+..
T Consensus 115 ~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~lllr~~~-------------------- 174 (266)
T TIGR01533 115 AQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLLLKKDK-------------------- 174 (266)
T ss_pred CCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEEeCCCC--------------------
Confidence 35778999999999999999999999998744 44577888899754 3555543210
Q ss_pred CCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCccc
Q 044553 144 GCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCP 185 (275)
Q Consensus 144 ~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~ 185 (275)
..|....+.+...+ .-+++|||..+|+..
T Consensus 175 --------~~K~~rr~~I~~~y-----~Ivl~vGD~~~Df~~ 203 (266)
T TIGR01533 175 --------SSKESRRQKVQKDY-----EIVLLFGDNLLDFDD 203 (266)
T ss_pred --------CCcHHHHHHHHhcC-----CEEEEECCCHHHhhh
Confidence 11555566555543 458999999999954
No 100
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=99.11 E-value=5.7e-10 Score=95.15 Aligned_cols=114 Identities=21% Similarity=0.144 Sum_probs=72.3
Q ss_pred CCCC-CCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceee---cccCCCCCCCCCC
Q 044553 70 IPIH-PRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRI---FPFHDFTKCSHGC 145 (275)
Q Consensus 70 ~~~~-pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~---kp~~~~~~~~~~~ 145 (275)
+++. |++.++|++|+++|++++|+||+++..+...++.+|+..+|+.|+|++......+.... +-...|...++..
T Consensus 146 v~irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~i~~k~~~~~~~d~~~~~~~~~~~f~~ 225 (303)
T PHA03398 146 VRIRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGRKAGEYSRRVIVDNKYKMVFVKKPFYL 225 (303)
T ss_pred cccCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCccccEEEECCCcccccccceeecccceeEEecCceeE
Confidence 4444 99999999999999999999999999999999999999999999998875433210000 0000022222323
Q ss_pred CcCC-CCCchH-HHHHHHHHhhhcCCCCeEEEEcCC-CCCc
Q 044553 146 NLCP-PNMCKG-VVIERIQASLSKEGNKKIIYLGDG-SGDY 183 (275)
Q Consensus 146 ~~~~-~~~~K~-~~l~~~~~~~~~~~~~~~i~vGDs-~~Di 183 (275)
+.-. .+.+|. +++-.++.+.+..-.+.+-.|.|= .||+
T Consensus 226 d~~~~~~lPKSprvVl~yL~~~gvn~~KtiTLVDDl~~Nn~ 266 (303)
T PHA03398 226 DVTDVKNLPKSPRVVLWYLRKKGVNYFKTITLVDDLKSNNY 266 (303)
T ss_pred eCCcccCCCCCCeehHHHHHHcCcceeccEEEeccCcccCc
Confidence 2211 122332 455555555554334566677775 4555
No 101
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=99.05 E-value=1.2e-09 Score=92.96 Aligned_cols=77 Identities=14% Similarity=0.027 Sum_probs=52.1
Q ss_pred CchHHHHHHHHHhhhcCCCCeEEEEcCC-CCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHHHHH
Q 044553 152 MCKGVVIERIQASLSKEGNKKIIYLGDG-SGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQI 230 (275)
Q Consensus 152 ~~K~~~l~~~~~~~~~~~~~~~i~vGDs-~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el~~~ 230 (275)
++-..+++..+...+.. +++++||||+ .+||.+|.++|+..+.+..+-+..+++- ..+..| .+.+++..++...
T Consensus 190 KP~~~i~~~al~~~~~~-~~~~~mVGD~~~TDI~~a~~~G~~t~LV~TGv~~~~~~~-~~~~~p---~~v~~sl~~~~~~ 264 (269)
T COG0647 190 KPSPAIYEAALEKLGLD-RSEVLMVGDRLDTDILGAKAAGLDTLLVLTGVSSAEDLD-RAEVKP---TYVVDSLAELITA 264 (269)
T ss_pred CCCHHHHHHHHHHhCCC-cccEEEEcCCchhhHHHHHHcCCCEEEEccCCCChhhhh-hhccCC---cchHhhHHHHHhh
Confidence 34457777777777654 3799999999 7899999999997666665555444432 222222 3366788887776
Q ss_pred HHH
Q 044553 231 LLH 233 (275)
Q Consensus 231 l~~ 233 (275)
+..
T Consensus 265 ~~~ 267 (269)
T COG0647 265 LKE 267 (269)
T ss_pred hhc
Confidence 654
No 102
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=99.02 E-value=2.3e-09 Score=91.33 Aligned_cols=51 Identities=12% Similarity=0.182 Sum_probs=40.1
Q ss_pred CCCchHHHHHHHHHhhhcCCCCeEEEEcCCC-CCcccccccCCCCeEeecCCc
Q 044553 150 PNMCKGVVIERIQASLSKEGNKKIIYLGDGS-GDYCPSLKLSEGDHVMPRKNF 201 (275)
Q Consensus 150 ~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~~~~~~~~~~~~~ 201 (275)
.++++..+++.++..++.. +++++||||+. +||.+|+++|+..+++.++..
T Consensus 176 ~gKP~~~~~~~~~~~~~~~-~~~~~~VGD~~~~Di~~a~~~G~~~v~v~~G~~ 227 (249)
T TIGR01457 176 IGKPNAIIMEKAVEHLGTE-REETLMVGDNYLTDIRAGIDAGIDTLLVHTGVT 227 (249)
T ss_pred cCCChHHHHHHHHHHcCCC-cccEEEECCCchhhHHHHHHcCCcEEEEcCCCC
Confidence 3456678899888887654 58999999996 899999999998777654433
No 103
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=99.01 E-value=3.2e-10 Score=89.99 Aligned_cols=105 Identities=18% Similarity=0.221 Sum_probs=61.0
Q ss_pred hcCCCCCCHHHHHHHHHHcCCcEEEEeC-CCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCC
Q 044553 68 KRIPIHPRVVPAIKSAHALGCELRIVSD-ANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCN 146 (275)
Q Consensus 68 ~~~~~~pg~~e~L~~L~~~g~~~~IvS~-~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~ 146 (275)
..+.+||++.++|++|+++|++++++|- .....++.+|+.+++........+....++. ... +|
T Consensus 42 ~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~~~~~F~~---~eI--~~---------- 106 (169)
T PF12689_consen 42 EEVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADGDGVPLIEYFDY---LEI--YP---------- 106 (169)
T ss_dssp -EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C----------CCECE---EEE--SS----------
T ss_pred CEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCccccccccchhhcch---hhe--ec----------
Confidence 5688999999999999999999999995 4567999999999998221112221111100 011 11
Q ss_pred cCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCC
Q 044553 147 LCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGD 193 (275)
Q Consensus 147 ~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~ 193 (275)
.+|..-++.+.++.++. +++++++.|....+....++|...
T Consensus 107 -----gsK~~Hf~~i~~~tgI~-y~eMlFFDDe~~N~~~v~~lGV~~ 147 (169)
T PF12689_consen 107 -----GSKTTHFRRIHRKTGIP-YEEMLFFDDESRNIEVVSKLGVTC 147 (169)
T ss_dssp -----S-HHHHHHHHHHHH----GGGEEEEES-HHHHHHHHTTT-EE
T ss_pred -----CchHHHHHHHHHhcCCC-hhHEEEecCchhcceeeEecCcEE
Confidence 24889999999888775 689999999977675555556533
No 104
>PRK10444 UMP phosphatase; Provisional
Probab=99.00 E-value=8e-09 Score=87.81 Aligned_cols=72 Identities=10% Similarity=0.075 Sum_probs=49.2
Q ss_pred CCchHHHHHHHHHhhhcCCCCeEEEEcCCC-CCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHH
Q 044553 151 NMCKGVVIERIQASLSKEGNKKIIYLGDGS-GDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEEL 227 (275)
Q Consensus 151 ~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el 227 (275)
++++...++.++..++.. +++|+||||+. +|+.+|+++|...+.+..+.+...++ .+....+ ...++++.|+
T Consensus 173 gKP~~~~~~~~~~~~~~~-~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~~~~~~l-~~~~~~p---d~~~~sl~el 245 (248)
T PRK10444 173 GKPSPWIIRAALNKMQAH-SEETVIVGDNLRTDILAGFQAGLETILVLSGVSTLDDI-DSMPFRP---SWIYPSVADI 245 (248)
T ss_pred CCCCHHHHHHHHHHcCCC-cccEEEECCCcHHHHHHHHHcCCCEEEECCCCCCHHHH-hcCCCCC---CEEECCHHHh
Confidence 456778899988887654 58999999996 89999999998766664443333333 2211122 2357788776
No 105
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=98.99 E-value=1.2e-08 Score=87.48 Aligned_cols=78 Identities=17% Similarity=0.196 Sum_probs=50.2
Q ss_pred CCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHH
Q 044553 148 CPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEEL 227 (275)
Q Consensus 148 ~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el 227 (275)
-+.+..|..+++.++..++.. +++++++|||.||+.+-.. ++..++-++. . +.+.+.... +..-.+-.-+
T Consensus 184 ~~~g~~K~~al~~l~~~lgi~-~~~v~afGD~~ND~~Ml~~---ag~gvam~Na-~-~~~k~~A~~----vt~~n~~~Gv 253 (264)
T COG0561 184 TPKGVSKGYALQRLAKLLGIK-LEEVIAFGDSTNDIEMLEV---AGLGVAMGNA-D-EELKELADY----VTTSNDEDGV 253 (264)
T ss_pred ecCCCchHHHHHHHHHHhCCC-HHHeEEeCCccccHHHHHh---cCeeeeccCC-C-HHHHhhCCc----ccCCccchHH
Confidence 477889999999999988876 5799999999999988854 4444443333 1 222221111 1133455566
Q ss_pred HHHHHHHH
Q 044553 228 EQILLHLV 235 (275)
Q Consensus 228 ~~~l~~~~ 235 (275)
.+.|++++
T Consensus 254 ~~~l~~~~ 261 (264)
T COG0561 254 AEALEKLL 261 (264)
T ss_pred HHHHHHHh
Confidence 66666554
No 106
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=98.98 E-value=2.3e-09 Score=89.17 Aligned_cols=116 Identities=16% Similarity=0.240 Sum_probs=71.3
Q ss_pred CCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCC-CCceeecccC---------------
Q 044553 73 HPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDE-EGRLRIFPFH--------------- 136 (275)
Q Consensus 73 ~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~-~g~~~~kp~~--------------- 136 (275)
.|...+.|++|++.|++++++|+.+...++.+++.++++.++ |.++...+-. .+.....+..
T Consensus 20 ~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~--i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 20 SERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPV--VAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred CHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcE--EEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 456678888888888999999988888888888888876331 1111111000 0000000000
Q ss_pred -CC--------------------------------CCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCc
Q 044553 137 -DF--------------------------------TKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDY 183 (275)
Q Consensus 137 -~~--------------------------------~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di 183 (275)
.+ ....+..+..+.+..|...++.++..++.. ++++++||||.||+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~-~~~~i~iGDs~ND~ 176 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIK-PEEVAAIGDSENDI 176 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCC-HHHEEEECCCHHHH
Confidence 00 000000011256788999999999988765 37899999999999
Q ss_pred ccccccCC
Q 044553 184 CPSLKLSE 191 (275)
Q Consensus 184 ~~a~~~~~ 191 (275)
.+...++.
T Consensus 177 ~ml~~ag~ 184 (215)
T TIGR01487 177 DLFRVVGF 184 (215)
T ss_pred HHHHhCCC
Confidence 99865543
No 107
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=98.93 E-value=1e-08 Score=88.18 Aligned_cols=93 Identities=13% Similarity=0.096 Sum_probs=58.4
Q ss_pred CCCHHHHHHHHHHcCCcEEEEeCCCH-----HHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCc
Q 044553 73 HPRVVPAIKSAHALGCELRIVSDANL-----FFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNL 147 (275)
Q Consensus 73 ~pg~~e~L~~L~~~g~~~~IvS~~~~-----~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~ 147 (275)
++++.+++..++..+..+.++++... ...+.+.+.+++. ...+.... +..
T Consensus 139 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~----~~~s~~~~------~ei--------------- 193 (272)
T PRK10530 139 FTQVDSLAQAARQVNAIWKFALTHEDLPQLQHFAKHVEHELGLE----CEWSWHDQ------VDI--------------- 193 (272)
T ss_pred eEEcccHHHHHhhcCCcEEEEEecCCHHHHHHHHHHHhhhcCce----EEEecCce------EEE---------------
Confidence 56677778777777777777776542 2233333443432 11111110 111
Q ss_pred CCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCC
Q 044553 148 CPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 148 ~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
.+.+..|...++.++..++.. ++++++|||+.||+.++..+|.
T Consensus 194 ~~~~~~K~~~l~~l~~~~gi~-~~e~i~~GD~~NDi~m~~~ag~ 236 (272)
T PRK10530 194 ARKGNSKGKRLTQWVEAQGWS-MKNVVAFGDNFNDISMLEAAGL 236 (272)
T ss_pred ecCCCChHHHHHHHHHHcCCC-HHHeEEeCCChhhHHHHHhcCc
Confidence 123345999999999998875 4899999999999999977664
No 108
>COG4996 Predicted phosphatase [General function prediction only]
Probab=98.91 E-value=5.1e-09 Score=77.64 Aligned_cols=85 Identities=21% Similarity=0.205 Sum_probs=68.8
Q ss_pred hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCc
Q 044553 68 KRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNL 147 (275)
Q Consensus 68 ~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~ 147 (275)
.++.++|.+++++.+++..|+-+..+|=+..+-+-..|+.+++..||+.++ .+|+|.
T Consensus 38 ~ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral~~~~yFhy~V-------------iePhP~---------- 94 (164)
T COG4996 38 REVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRALDLLQYFHYIV-------------IEPHPY---------- 94 (164)
T ss_pred eEEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHhchhhhEEEEE-------------ecCCCh----------
Confidence 458899999999999999999999999778888888999999999999876 367775
Q ss_pred CCCCCchHHHHHHHHHhhhc-----CCCCeEEEEcCCCC
Q 044553 148 CPPNMCKGVVIERIQASLSK-----EGNKKIIYLGDGSG 181 (275)
Q Consensus 148 ~~~~~~K~~~l~~~~~~~~~-----~~~~~~i~vGDs~~ 181 (275)
|..++.+++...+. ..|++++|+.|..-
T Consensus 95 ------K~~ML~~llr~i~~er~~~ikP~~Ivy~DDR~i 127 (164)
T COG4996 95 ------KFLMLSQLLREINTERNQKIKPSEIVYLDDRRI 127 (164)
T ss_pred ------hHHHHHHHHHHHHHhhccccCcceEEEEecccc
Confidence 66777776654321 13689999999743
No 109
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=98.90 E-value=7.6e-09 Score=86.53 Aligned_cols=43 Identities=19% Similarity=0.240 Sum_probs=36.6
Q ss_pred CCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCC
Q 044553 148 CPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 148 ~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
++.+..|...++.++..++.. ++++++|||+.||+.+...+|.
T Consensus 144 ~~~~~~K~~~i~~l~~~~~i~-~~~~i~~GD~~NDi~m~~~ag~ 186 (225)
T TIGR01482 144 LPQGVNKGVAVKKLKEKLGIK-PGETLVCGDSENDIDLFEVPGF 186 (225)
T ss_pred eeCCCCHHHHHHHHHHHhCCC-HHHEEEECCCHhhHHHHHhcCc
Confidence 467788999999999988776 4899999999999999966443
No 110
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=98.86 E-value=2.2e-08 Score=88.18 Aligned_cols=122 Identities=19% Similarity=0.278 Sum_probs=80.5
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHc-C-------CcCCcceEecCCCcc--CCCCceeecccCCCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHL-G-------IRDCFSEINTNPGFV--DEEGRLRIFPFHDFT 139 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~-g-------l~~~fd~i~~~~~~~--~~~g~~~~kp~~~~~ 139 (275)
+.++||+.++|+.|+++|++++|+||++..+++.+++.+ | +.++||.|++..... -.++ +|.-...
T Consensus 183 v~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~----~pf~~v~ 258 (343)
T TIGR02244 183 VLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKPGFFTEG----RPFRQVD 258 (343)
T ss_pred hccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEeCCCCCcccCCC----CceEEEe
Confidence 678999999999999999999999999999999999996 7 899999999875421 0111 1111000
Q ss_pred --------CCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCC-CCCccccc-ccCCCCeEeec
Q 044553 140 --------KCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDG-SGDYCPSL-KLSEGDHVMPR 198 (275)
Q Consensus 140 --------~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs-~~Di~~a~-~~~~~~~~~~~ 198 (275)
........ .....+-.+..+....+.. +++++||||+ .+||..++ .+||..+++..
T Consensus 259 ~~~g~~~~~~~~~l~~--g~vY~gGn~~~~~~~l~~~-~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~p 324 (343)
T TIGR02244 259 VETGSLKWGEVDGLEP--GKVYSGGSLKQFHELLKWR-GKEVLYFGDHIYGDLLRSKKKRGWRTAAIIP 324 (343)
T ss_pred CCCCcccCCccccccC--CCeEeCCCHHHHHHHHCCC-CCcEEEECCcchHHHHhhHHhcCcEEEEEch
Confidence 00000000 0000111222333333344 3799999999 68999887 78888877664
No 111
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=98.85 E-value=2.5e-08 Score=78.99 Aligned_cols=97 Identities=15% Similarity=0.113 Sum_probs=66.2
Q ss_pred CCCCCCHHHHHHHHHHcCC--cEEEEeCCC-------HHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCC
Q 044553 70 IPIHPRVVPAIKSAHALGC--ELRIVSDAN-------LFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTK 140 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~--~~~IvS~~~-------~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~ 140 (275)
..+.|.+.+.+++|++.+. +++|+||+. ...++.+-+.+|+. ++... ..||.
T Consensus 58 ~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp-----vl~h~---------~kKP~----- 118 (168)
T PF09419_consen 58 DEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIP-----VLRHR---------AKKPG----- 118 (168)
T ss_pred CcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCc-----EEEeC---------CCCCc-----
Confidence 3456777788888888865 499999984 66777777888874 32211 12542
Q ss_pred CCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCC-CCCcccccccCCCCeEee
Q 044553 141 CSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDG-SGDYCPSLKLSEGDHVMP 197 (275)
Q Consensus 141 ~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs-~~Di~~a~~~~~~~~~~~ 197 (275)
|..++++.+........|+++++|||. .+|+.+|..+|.-.+++.
T Consensus 119 ------------~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G~~tilv~ 164 (168)
T PF09419_consen 119 ------------CFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMGSYTILVT 164 (168)
T ss_pred ------------cHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccCceEEEEe
Confidence 245666666543222236899999999 789999988886666554
No 112
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=98.83 E-value=1.5e-08 Score=95.95 Aligned_cols=117 Identities=19% Similarity=0.202 Sum_probs=83.8
Q ss_pred CCCCCCHHHHHHHHHHcC-CcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcC
Q 044553 70 IPIHPRVVPAIKSAHALG-CELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLC 148 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g-~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~ 148 (275)
..++||+.++|++|+++| ++++|+||.+...++.+++++|++++|..+. |
T Consensus 383 d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~~f~~~~---------------p-------------- 433 (556)
T TIGR01525 383 DQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDEVHAELL---------------P-------------- 433 (556)
T ss_pred ccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCeeeccCC---------------H--------------
Confidence 579999999999999999 9999999999999999999999976654331 1
Q ss_pred CCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHHH
Q 044553 149 PPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELE 228 (275)
Q Consensus 149 ~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el~ 228 (275)
..|...++++... +.+++||||+.+|+.++++++ +.++.+ .+ .+........ +..=+++..|.
T Consensus 434 ---~~K~~~v~~l~~~-----~~~v~~vGDg~nD~~al~~A~---vgia~g-~~-~~~~~~~Ad~----vi~~~~~~~l~ 496 (556)
T TIGR01525 434 ---EDKLAIVKELQEE-----GGVVAMVGDGINDAPALAAAD---VGIAMG-AG-SDVAIEAADI----VLLNDDLSSLP 496 (556)
T ss_pred ---HHHHHHHHHHHHc-----CCEEEEEECChhHHHHHhhCC---EeEEeC-CC-CHHHHHhCCE----EEeCCCHHHHH
Confidence 1267888887753 369999999999999997655 444433 21 2333222222 22235677766
Q ss_pred HHHH
Q 044553 229 QILL 232 (275)
Q Consensus 229 ~~l~ 232 (275)
+.++
T Consensus 497 ~~i~ 500 (556)
T TIGR01525 497 TAID 500 (556)
T ss_pred HHHH
Confidence 6554
No 113
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=98.82 E-value=1.5e-08 Score=80.63 Aligned_cols=89 Identities=15% Similarity=0.080 Sum_probs=65.7
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcC-CcceEecCCCccCCCCceeecccCCCCCCCCCCCcC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRD-CFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLC 148 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~-~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~ 148 (275)
+...||+.++|++|.+. +.++|.|+++..+++.++++++... +|+.+++.+..... ++.-
T Consensus 41 v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~~~f~~~l~r~~~~~~------~~~~------------ 101 (162)
T TIGR02251 41 VFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGGKVISRRLYRESCVFT------NGKY------------ 101 (162)
T ss_pred EEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCCCEEeEEEEccccEEe------CCCE------------
Confidence 56789999999999987 9999999999999999999999875 88888776543211 1110
Q ss_pred CCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccc
Q 044553 149 PPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLK 188 (275)
Q Consensus 149 ~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~ 188 (275)
...+..+ +. +++++++|||++.|+.++..
T Consensus 102 ------~K~L~~l----~~-~~~~vIiVDD~~~~~~~~~~ 130 (162)
T TIGR02251 102 ------VKDLSLV----GK-DLSKVIIIDNSPYSYSLQPD 130 (162)
T ss_pred ------EeEchhc----CC-ChhhEEEEeCChhhhccCcc
Confidence 0111122 22 25799999999999977643
No 114
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=98.81 E-value=1.8e-08 Score=94.96 Aligned_cols=118 Identities=19% Similarity=0.193 Sum_probs=84.6
Q ss_pred CCCCCCHHHHHHHHHHcCC-cEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcC
Q 044553 70 IPIHPRVVPAIKSAHALGC-ELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLC 148 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~-~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~ 148 (275)
..++||+.++|++|+++|+ +++++||.+...++.+++++|++++|..+. |.
T Consensus 361 d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~~f~~~~---------------p~------------- 412 (536)
T TIGR01512 361 DEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDEVHAELL---------------PE------------- 412 (536)
T ss_pred ccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChhhhhccC---------------cH-------------
Confidence 5789999999999999999 999999999999999999999987654321 11
Q ss_pred CCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHHH
Q 044553 149 PPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELE 228 (275)
Q Consensus 149 ~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el~ 228 (275)
.|...++++..+ .++++||||+.+|+.+++.++ +.++.+..+ .+........ +..-+++.+|.
T Consensus 413 ----~K~~~i~~l~~~-----~~~v~~vGDg~nD~~al~~A~---vgia~g~~~-~~~~~~~ad~----vl~~~~l~~l~ 475 (536)
T TIGR01512 413 ----DKLEIVKELREK-----YGPVAMVGDGINDAPALAAAD---VGIAMGASG-SDVAIETADV----VLLNDDLSRLP 475 (536)
T ss_pred ----HHHHHHHHHHhc-----CCEEEEEeCCHHHHHHHHhCC---EEEEeCCCc-cHHHHHhCCE----EEECCCHHHHH
Confidence 277888888754 369999999999999986654 444433121 1222222211 22337788876
Q ss_pred HHHH
Q 044553 229 QILL 232 (275)
Q Consensus 229 ~~l~ 232 (275)
+.++
T Consensus 476 ~~i~ 479 (536)
T TIGR01512 476 QAIR 479 (536)
T ss_pred HHHH
Confidence 6544
No 115
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=98.76 E-value=6.7e-09 Score=82.20 Aligned_cols=84 Identities=25% Similarity=0.340 Sum_probs=52.4
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEeCC----C----------HHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCC
Q 044553 72 IHPRVVPAIKSAHALGCELRIVSDA----N----------LFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHD 137 (275)
Q Consensus 72 ~~pg~~e~L~~L~~~g~~~~IvS~~----~----------~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~ 137 (275)
.+|++.+.|+.|++.||.++|+||. . ...+..+++.+++. + .++++... + .-.||
T Consensus 30 ~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~l~ip--~-~~~~a~~~---d--~~RKP--- 98 (159)
T PF08645_consen 30 FPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKELGIP--I-QVYAAPHK---D--PCRKP--- 98 (159)
T ss_dssp C-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHHCTS---E-EEEECGCS---S--TTSTT---
T ss_pred cchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHHcCCc--e-EEEecCCC---C--CCCCC---
Confidence 3468999999999999999999984 1 13356667777765 2 23332210 0 12244
Q ss_pred CCCCCCCCCcCCCCCchHHHHHHHHHhhhc---CCCCeEEEEcCCCCC
Q 044553 138 FTKCSHGCNLCPPNMCKGVVIERIQASLSK---EGNKKIIYLGDGSGD 182 (275)
Q Consensus 138 ~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~---~~~~~~i~vGDs~~D 182 (275)
+.-+++.+...++. ...++++||||+..+
T Consensus 99 ----------------~~GM~~~~~~~~~~~~~id~~~Sf~VGDaagr 130 (159)
T PF08645_consen 99 ----------------NPGMWEFALKDYNDGVEIDLANSFYVGDAAGR 130 (159)
T ss_dssp ----------------SSHHHHHHCCCTSTT--S-CCC-EEEESSCHC
T ss_pred ----------------chhHHHHHHHhccccccccccceEEEeccCCC
Confidence 34777777777653 235799999997555
No 116
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.75 E-value=5.2e-09 Score=80.24 Aligned_cols=78 Identities=21% Similarity=0.234 Sum_probs=62.6
Q ss_pred HHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchHHHH
Q 044553 79 AIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVI 158 (275)
Q Consensus 79 ~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~l 158 (275)
-|+.|.+.|++++|+|+.....++..++.+|+..+ + +++ ..|..++
T Consensus 43 Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~~----~------------qG~------------------~dK~~a~ 88 (170)
T COG1778 43 GIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKHL----Y------------QGI------------------SDKLAAF 88 (170)
T ss_pred HHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCcee----e------------ech------------------HhHHHHH
Confidence 46777889999999999999999999999999743 3 111 1278999
Q ss_pred HHHHHhhhcCCCCeEEEEcCCCCCcccccccCC
Q 044553 159 ERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 159 ~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
+.++.+++.. ++++.|+||-.+|+..-...|.
T Consensus 89 ~~L~~~~~l~-~e~~ayiGDD~~Dlpvm~~vGl 120 (170)
T COG1778 89 EELLKKLNLD-PEEVAYVGDDLVDLPVMEKVGL 120 (170)
T ss_pred HHHHHHhCCC-HHHhhhhcCccccHHHHHHcCC
Confidence 9999998876 5899999999999965544443
No 117
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=98.70 E-value=4.1e-08 Score=82.86 Aligned_cols=47 Identities=21% Similarity=0.225 Sum_probs=38.5
Q ss_pred CCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecC
Q 044553 149 PPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK 199 (275)
Q Consensus 149 ~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~ 199 (275)
+.+..|..+++.++..++... +++++|||+.||+.+... ++..++-+
T Consensus 182 ~~~vsK~~ai~~l~~~~~i~~-~~~~~~GD~~ND~~Ml~~---~~~~~am~ 228 (254)
T PF08282_consen 182 PKGVSKGSAIKYLLEYLGISP-EDIIAFGDSENDIEMLEL---AGYSVAMG 228 (254)
T ss_dssp ETTSSHHHHHHHHHHHHTTSG-GGEEEEESSGGGHHHHHH---SSEEEEET
T ss_pred eCCCCHHHHHHHHhhhccccc-ceeEEeecccccHhHHhh---cCeEEEEc
Confidence 678889999999999888764 899999999999998855 45555544
No 118
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=98.69 E-value=4e-07 Score=84.42 Aligned_cols=165 Identities=18% Similarity=0.126 Sum_probs=92.8
Q ss_pred ceEEEEEcCCcccCCcc-HH-HHHHHhCCChHH------------HhhcCCCChHHHHHHHHHHHHhCCCCHHHHHHHH-
Q 044553 3 GIVVIFDFDKTIIDCDS-DN-FVVDELGATDLF------------NQLLPTMPWNSLMDRMMKELHSQGKTIEDIVEVL- 67 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~-~~-~~~~~~g~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 67 (275)
..+++|||||||+.+++ +. .++-.++..... ........-....+.++... -.+.+.+++.+..
T Consensus 22 ~~~~~FDfDGTLt~~~s~f~~Fll~A~~~~~~~r~lllll~~P~~~l~~~~~~~~~~~~~l~~~~-f~G~~~~el~~~~r 100 (497)
T PLN02177 22 NQTVAADLDGTLLISRSAFPYYLLVALEAGSLLRALILLLSVPFVYFTYLFISESLAIKTFVFIA-FAGLKIRDIELVSR 100 (497)
T ss_pred ccEEEEecCCcccCCCCccHHHHHHHcccchHHHHHHHHHHhHHHHHHHhcCCchhHHHHHHHHH-HcCCCHHHHHHHHH
Confidence 35799999999999764 32 222222211110 11100111122233333322 2355555553322
Q ss_pred ---hc---CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHH-cCCcCCcceEecCCCccCCCCceeecccCCCCC
Q 044553 68 ---KR---IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEH-LGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTK 140 (275)
Q Consensus 68 ---~~---~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~-~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~ 140 (275)
.+ -.++|.+.+ .++++|.. +|+|++++.+++.+++. +|++ .+++++...+.+|.++++....
T Consensus 101 ~~l~~f~~~~l~~~a~~---~~~~~g~~-vvVSASp~~~Vepfa~~~LGid----~VIgTeLev~~~G~~TG~i~g~--- 169 (497)
T PLN02177 101 SVLPKFYAEDVHPETWR---VFNSFGKR-YIITASPRIMVEPFVKTFLGAD----KVLGTELEVSKSGRATGFMKKP--- 169 (497)
T ss_pred HHHHHHHHHhcCHHHHH---HHHhCCCE-EEEECCcHHHHHHHHHHcCCCC----EEEecccEECcCCEEeeeecCC---
Confidence 11 225565555 44567754 99999999999999986 7874 7888887765678888875331
Q ss_pred CCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccC
Q 044553 141 CSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLS 190 (275)
Q Consensus 141 ~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~ 190 (275)
. |--+..|...+++ .++.. . ..+++|||.+|..+...++
T Consensus 170 --~----~c~Ge~Kv~rl~~---~~g~~-~-~~~aYgDS~sD~plL~~a~ 208 (497)
T PLN02177 170 --G----VLVGDHKRDAVLK---EFGDA-L-PDLGLGDRETDHDFMSICK 208 (497)
T ss_pred --C----CCccHHHHHHHHH---HhCCC-C-ceEEEECCccHHHHHHhCC
Confidence 0 0112337776663 33222 1 2389999999996654433
No 119
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=98.69 E-value=6.1e-07 Score=77.17 Aligned_cols=77 Identities=14% Similarity=0.107 Sum_probs=53.2
Q ss_pred CCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCccccccc-CCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHH
Q 044553 149 PPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKL-SEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEEL 227 (275)
Q Consensus 149 ~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el 227 (275)
+.+..|..++++++..++... ++++++||+.||+.+-..+ +..++.++-++. ...| -...++..++
T Consensus 170 p~g~~Kg~al~~ll~~~~~~~-~~v~~~GD~~nD~~mf~~~~~~~g~~vavg~a-----------~~~A-~~~l~~~~~v 236 (266)
T PRK10187 170 PRGTNKGEAIAAFMQEAPFAG-RTPVFVGDDLTDEAGFAVVNRLGGISVKVGTG-----------ATQA-SWRLAGVPDV 236 (266)
T ss_pred CCCCCHHHHHHHHHHhcCCCC-CeEEEEcCCccHHHHHHHHHhcCCeEEEECCC-----------CCcC-eEeCCCHHHH
Confidence 567789999999999887653 7899999999999765443 111333322211 1223 2367899999
Q ss_pred HHHHHHHHHHh
Q 044553 228 EQILLHLVNTI 238 (275)
Q Consensus 228 ~~~l~~~~~~~ 238 (275)
..+|+.+....
T Consensus 237 ~~~L~~l~~~~ 247 (266)
T PRK10187 237 WSWLEMITTAQ 247 (266)
T ss_pred HHHHHHHHHhh
Confidence 99999988544
No 120
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=98.67 E-value=8.2e-08 Score=79.12 Aligned_cols=43 Identities=19% Similarity=0.241 Sum_probs=35.7
Q ss_pred CCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCC
Q 044553 148 CPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 148 ~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
-+.+..|..+++.++.+++.. +++++++||+.||+.++..++.
T Consensus 158 ~p~~~~K~~~~~~~~~~~~~~-~~~~~~~GD~~nD~~~~~~~~~ 200 (204)
T TIGR01484 158 LPAGVDKGSALQALLKELNGK-RDEILAFGDSGNDEEMFEVAGL 200 (204)
T ss_pred ecCCCChHHHHHHHHHHhCCC-HHHEEEEcCCHHHHHHHHHcCC
Confidence 367889999999999988754 4789999999999988865443
No 121
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=98.67 E-value=1.5e-07 Score=68.67 Aligned_cols=48 Identities=23% Similarity=0.167 Sum_probs=35.2
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEeCCCH---HHHHHHHHHcCCcCCcceEec
Q 044553 72 IHPRVVPAIKSAHALGCELRIVSDANL---FFIETILEHLGIRDCFSEINT 119 (275)
Q Consensus 72 ~~pg~~e~L~~L~~~g~~~~IvS~~~~---~~i~~~l~~~gl~~~fd~i~~ 119 (275)
++||+.++|++|+++|.+++++||++. ......|+.+|+.--.+.|++
T Consensus 15 ~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~i~t 65 (101)
T PF13344_consen 15 PIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDEIIT 65 (101)
T ss_dssp E-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGGEEE
T ss_pred cCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCEEEC
Confidence 589999999999999999999999753 345556678898744455654
No 122
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=98.65 E-value=2.4e-07 Score=87.88 Aligned_cols=83 Identities=19% Similarity=0.324 Sum_probs=68.4
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCP 149 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~ 149 (275)
.+++||+.++|++|+++|++++++||.....++.+++++|++ +++. .+|.
T Consensus 404 d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~-----~~~~-----------~~p~-------------- 453 (562)
T TIGR01511 404 DQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN-----VRAE-----------VLPD-------------- 453 (562)
T ss_pred ccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-----EEcc-----------CChH--------------
Confidence 578999999999999999999999999999999999999995 2221 1221
Q ss_pred CCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccC
Q 044553 150 PNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLS 190 (275)
Q Consensus 150 ~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~ 190 (275)
.|.+.++++..+ +++|+||||+.||+.++++++
T Consensus 454 ---~K~~~v~~l~~~-----~~~v~~VGDg~nD~~al~~A~ 486 (562)
T TIGR01511 454 ---DKAALIKELQEK-----GRVVAMVGDGINDAPALAQAD 486 (562)
T ss_pred ---HHHHHHHHHHHc-----CCEEEEEeCCCccHHHHhhCC
Confidence 278888888763 479999999999999986654
No 123
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=98.63 E-value=5.1e-07 Score=75.14 Aligned_cols=131 Identities=17% Similarity=0.027 Sum_probs=80.9
Q ss_pred ceEEEEEcCCcccCCccHHHHHHHhCCChHHHhhcCCCChHHHHHHHHHHHHhCCCCHHHHHHHH--hcCCCCCCHHHHH
Q 044553 3 GIVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTIEDIVEVL--KRIPIHPRVVPAI 80 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~pg~~e~L 80 (275)
+.+++||+|.|++++.+.... .++ +.. ..+...+.+++ ...++.|++.+++
T Consensus 77 ~~A~V~DIDET~LsN~py~~~---~~~--------g~~----------------~~~~~~~~~wv~~~~apaip~al~l~ 129 (229)
T TIGR01675 77 MDAWIFDVDDTLLSNIPYYKK---HGY--------GTE----------------KTDPTAFWLWLGKGAAPALPEGLKLY 129 (229)
T ss_pred CcEEEEccccccccCHHHHHH---hcc--------CCC----------------cCCHHHHHHHHHcCCCCCCHHHHHHH
Confidence 579999999999998552111 111 000 11122222222 3578899999999
Q ss_pred HHHHHcCCcEEEEeCCCHHH---HHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchHHH
Q 044553 81 KSAHALGCELRIVSDANLFF---IETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVV 157 (275)
Q Consensus 81 ~~L~~~g~~~~IvS~~~~~~---i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~ 157 (275)
+.|+++|++++++|+.+... ...-|.+.|+..+ +.++-.+..- ..+.. -..|.+.
T Consensus 130 ~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~-~~LiLR~~~d------~~~~~---------------~~yKs~~ 187 (229)
T TIGR01675 130 QKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW-KHLILRGLED------SNKTV---------------VTYKSEV 187 (229)
T ss_pred HHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc-CeeeecCCCC------CCchH---------------hHHHHHH
Confidence 99999999999999998766 6667777888654 4444321100 00100 0115565
Q ss_pred HHHHHHhhhcCCCCeEEEEcCCCCCcccc
Q 044553 158 IERIQASLSKEGNKKIIYLGDGSGDYCPS 186 (275)
Q Consensus 158 l~~~~~~~~~~~~~~~i~vGDs~~Di~~a 186 (275)
.+++..+ +..-+..|||..+|+...
T Consensus 188 R~~l~~~----GYrIv~~iGDq~sDl~G~ 212 (229)
T TIGR01675 188 RKSLMEE----GYRIWGNIGDQWSDLLGS 212 (229)
T ss_pred HHHHHhC----CceEEEEECCChHHhcCC
Confidence 5555543 455566799999999643
No 124
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=98.62 E-value=2.3e-07 Score=73.36 Aligned_cols=103 Identities=14% Similarity=0.173 Sum_probs=62.0
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEeCCCHHHHH---HHHHHc---C--CcCCcceEecCCCccCC--CCceeecccCCCCCC
Q 044553 72 IHPRVVPAIKSAHALGCELRIVSDANLFFIE---TILEHL---G--IRDCFSEINTNPGFVDE--EGRLRIFPFHDFTKC 141 (275)
Q Consensus 72 ~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~---~~l~~~---g--l~~~fd~i~~~~~~~~~--~g~~~~kp~~~~~~~ 141 (275)
..|++.++++.++++|++++++|+.+...+. ..++.+ | +. ...++++...... .+.. ....+
T Consensus 28 ~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp--~g~li~~~g~~~~~~~~e~-i~~~~----- 99 (157)
T smart00775 28 THPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLP--HGPVLLSPDRLFAALHREV-ISKKP----- 99 (157)
T ss_pred CCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCC--CceEEEcCCcchhhhhccc-ccCCH-----
Confidence 4699999999999999999999999877664 666662 2 32 1245544432110 0000 00001
Q ss_pred CCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCC
Q 044553 142 SHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 142 ~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
..-|...++.+...+......-+..+||+.+|+.+-..+|.
T Consensus 100 ---------~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi 140 (157)
T smart00775 100 ---------EVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGI 140 (157)
T ss_pred ---------HHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCC
Confidence 11277888888875532222234458888999976655444
No 125
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=98.61 E-value=6.3e-09 Score=88.24 Aligned_cols=98 Identities=10% Similarity=0.024 Sum_probs=71.6
Q ss_pred CCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceE--ecCCCccCCCCceeecccCCCCCCCCCCCcCCC
Q 044553 73 HPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEI--NTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPP 150 (275)
Q Consensus 73 ~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i--~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~ 150 (275)
++++.++++.|+++|+++ |+||....+....+..+|...+|..+ ++.+. ...+||+|
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g~~~~~i~~~g~~~------~~~gKP~~-------------- 198 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAGYYAELIKQLGGKV------IYSGKPYP-------------- 198 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEecccHHHHHHHHhCCcE------ecCCCCCH--------------
Confidence 688899999998899997 88999887776666777776666644 33221 12457765
Q ss_pred CCchHHHHHHHHHhhhcCCCCeEEEEcCC-CCCcccccccCCCCeEe
Q 044553 151 NMCKGVVIERIQASLSKEGNKKIIYLGDG-SGDYCPSLKLSEGDHVM 196 (275)
Q Consensus 151 ~~~K~~~l~~~~~~~~~~~~~~~i~vGDs-~~Di~~a~~~~~~~~~~ 196 (275)
..++.++.+++..++++++||||+ .+|+.+|+++|...+++
T Consensus 199 -----~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v 240 (242)
T TIGR01459 199 -----AIFHKALKECSNIPKNRMLMVGDSFYTDILGANRLGIDTALV 240 (242)
T ss_pred -----HHHHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCeEEEE
Confidence 566677777654434689999999 69999999888765543
No 126
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=98.59 E-value=4.8e-07 Score=77.33 Aligned_cols=50 Identities=18% Similarity=0.135 Sum_probs=38.7
Q ss_pred CCCCCchHHHHHHHHHhhhcC-CCCeEEEEcCCCCCcccccccCCCCeEeecCC
Q 044553 148 CPPNMCKGVVIERIQASLSKE-GNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKN 200 (275)
Q Consensus 148 ~~~~~~K~~~l~~~~~~~~~~-~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~ 200 (275)
.+.+..|...++.++..+++. ..+++++|||+.||+.+... ++..++-.+
T Consensus 171 ~~~~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~---ag~~vam~N 221 (256)
T TIGR01486 171 LGAGSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEV---VDLAVVVPG 221 (256)
T ss_pred ecCCCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHH---CCEEEEeCC
Confidence 467888999999999988764 14799999999999998855 444444333
No 127
>PRK10671 copA copper exporting ATPase; Provisional
Probab=98.53 E-value=3.2e-07 Score=90.97 Aligned_cols=117 Identities=20% Similarity=0.258 Sum_probs=85.1
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCP 149 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~ 149 (275)
-+++|++.+.|++|++.|++++++|+.....++.+++++|++++|..+ .|.
T Consensus 649 d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~~~~~~---------------~p~-------------- 699 (834)
T PRK10671 649 DPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDEVIAGV---------------LPD-------------- 699 (834)
T ss_pred CcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCEEEeCC---------------CHH--------------
Confidence 468999999999999999999999999999999999999997543211 121
Q ss_pred CCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHHHH
Q 044553 150 PNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQ 229 (275)
Q Consensus 150 ~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el~~ 229 (275)
.|.++++.+..+ +++++||||+.||+.+++.++. .++.++. . +...+... . ++.-+++.+|..
T Consensus 700 ---~K~~~i~~l~~~-----~~~v~~vGDg~nD~~al~~Agv---gia~g~g-~-~~a~~~ad-~---vl~~~~~~~i~~ 762 (834)
T PRK10671 700 ---GKAEAIKRLQSQ-----GRQVAMVGDGINDAPALAQADV---GIAMGGG-S-DVAIETAA-I---TLMRHSLMGVAD 762 (834)
T ss_pred ---HHHHHHHHHhhc-----CCEEEEEeCCHHHHHHHHhCCe---eEEecCC-C-HHHHHhCC-E---EEecCCHHHHHH
Confidence 278888888654 4689999999999998866544 4443322 1 22222111 1 445688999988
Q ss_pred HHH
Q 044553 230 ILL 232 (275)
Q Consensus 230 ~l~ 232 (275)
.++
T Consensus 763 ~i~ 765 (834)
T PRK10671 763 ALA 765 (834)
T ss_pred HHH
Confidence 886
No 128
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=98.51 E-value=7.3e-07 Score=75.91 Aligned_cols=49 Identities=18% Similarity=0.167 Sum_probs=39.1
Q ss_pred CCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEee
Q 044553 148 CPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMP 197 (275)
Q Consensus 148 ~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~ 197 (275)
.+.+.+|...++.++..++.. +++++++||+.||+.+...++...+++.
T Consensus 162 ~~~~~~K~~al~~l~~~~~i~-~~~~i~~GD~~ND~~ml~~~~~~~va~~ 210 (249)
T TIGR01485 162 LPQGSGKGQALQYLLQKLAME-PSQTLVCGDSGNDIELFEIGSVRGVIVS 210 (249)
T ss_pred EeCCCChHHHHHHHHHHcCCC-ccCEEEEECChhHHHHHHccCCcEEEEC
Confidence 467889999999999988765 5899999999999999865343445543
No 129
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=98.46 E-value=1.1e-06 Score=87.72 Aligned_cols=134 Identities=15% Similarity=0.083 Sum_probs=89.4
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCC----------ceeecccCCCCC
Q 044553 71 PIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEG----------RLRIFPFHDFTK 140 (275)
Q Consensus 71 ~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g----------~~~~kp~~~~~~ 140 (275)
+++|++.++++.|++.|+++.++|+.....+..+.+.+|+...++.+++++.....++ .....+.|
T Consensus 528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P---- 603 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASP---- 603 (884)
T ss_pred cchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCH----
Confidence 7899999999999999999999999999999999999999877666655433211000 01111112
Q ss_pred CCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEee
Q 044553 141 CSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHE 220 (275)
Q Consensus 141 ~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 220 (275)
..|..+++.+... + +.+.|+||+.||..+.+. +++.++.+ ....+...+.+.. +..
T Consensus 604 -----------~~K~~iv~~lq~~----g-~~v~mvGDGvND~pAl~~---AdVGia~g-~~g~~va~~aaDi----vl~ 659 (884)
T TIGR01522 604 -----------EHKMKIVKALQKR----G-DVVAMTGDGVNDAPALKL---ADIGVAMG-QTGTDVAKEAADM----ILT 659 (884)
T ss_pred -----------HHHHHHHHHHHHC----C-CEEEEECCCcccHHHHHh---CCeeEecC-CCcCHHHHHhcCE----EEc
Confidence 2388888887754 2 689999999999998865 44555532 1112333332221 112
Q ss_pred CCChHHHHHHHH
Q 044553 221 WTDGEELEQILL 232 (275)
Q Consensus 221 ~~~~~el~~~l~ 232 (275)
=+++..+...++
T Consensus 660 dd~~~~i~~~i~ 671 (884)
T TIGR01522 660 DDDFATILSAIE 671 (884)
T ss_pred CCCHHHHHHHHH
Confidence 266888877655
No 130
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=98.45 E-value=1.8e-06 Score=72.30 Aligned_cols=121 Identities=24% Similarity=0.182 Sum_probs=75.8
Q ss_pred CCCCHHHHHHHHh--cCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeec
Q 044553 56 QGKTIEDIVEVLK--RIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIF 133 (275)
Q Consensus 56 ~~~~~~~~~~~~~--~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~k 133 (275)
.+.+.+.+.+.++ .+.+++|+.++++.|+++++|+.|.|+|....++.++++.|.-.---.|+||...++.+|...+-
T Consensus 73 ~~l~k~~i~~~V~~s~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv~VvSN~M~Fd~~g~l~gF 152 (246)
T PF05822_consen 73 QGLTKSEIEEAVKESDIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNVKVVSNFMDFDEDGVLVGF 152 (246)
T ss_dssp HT-BGGGHHHHHHCS---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTEEEEEE-EEE-TTSBEEEE
T ss_pred cCcCHHHHHHHHHhcchhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCeEEEeeeEEECCcceEeec
Confidence 3555555665554 47899999999999999999999999999999999999986432223799999999999987773
Q ss_pred ccCCCCCCCCCCCcCCCCCchHH-HHH--HHHHhhhcCCCCeEEEEcCCCCCccccccc
Q 044553 134 PFHDFTKCSHGCNLCPPNMCKGV-VIE--RIQASLSKEGNKKIIYLGDGSGDYCPSLKL 189 (275)
Q Consensus 134 p~~~~~~~~~~~~~~~~~~~K~~-~l~--~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~ 189 (275)
-.|- .|.. +|.+ ++. .+-.+ ...+.+++..|||..|+.+|..+
T Consensus 153 ~~~l----IH~~-------NKn~~~l~~~~~~~~--~~~R~NvlLlGDslgD~~Ma~G~ 198 (246)
T PF05822_consen 153 KGPL----IHTF-------NKNESALEDSPYFKQ--LKKRTNVLLLGDSLGDLHMADGV 198 (246)
T ss_dssp -SS-------TT--------HHHHHHTTHHHHHC--TTT--EEEEEESSSGGGGTTTT-
T ss_pred CCCc----eEEe-------eCCcccccCchHHHH--hccCCcEEEecCccCChHhhcCC
Confidence 2220 1222 1443 221 11122 22357999999999999999765
No 131
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.43 E-value=6.8e-07 Score=77.17 Aligned_cols=63 Identities=24% Similarity=0.342 Sum_probs=53.7
Q ss_pred CCceEEEEEcCCcccCCccHHHHHHHhCCChHHHhhcCCCChHHHHHHHHHHHHhCCCCHHHHHHHHhcCCCCCCHHHHH
Q 044553 1 MSGIVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTIEDIVEVLKRIPIHPRVVPAI 80 (275)
Q Consensus 1 m~~~~viFD~DGTL~d~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L 80 (275)
||+|+|++|+||||++.+. .+.+++.++|
T Consensus 2 ~~~kli~~DlDGTLl~~~~---------------------------------------------------~~~~~~~~ai 30 (273)
T PRK00192 2 MMKLLVFTDLDGTLLDHHT---------------------------------------------------YSYEPAKPAL 30 (273)
T ss_pred CcceEEEEcCcccCcCCCC---------------------------------------------------cCcHHHHHHH
Confidence 7889999999999987521 1245677899
Q ss_pred HHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCc
Q 044553 81 KSAHALGCELRIVSDANLFFIETILEHLGIRDCF 114 (275)
Q Consensus 81 ~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~f 114 (275)
+.|+++|++++++||.+...+...++.+|+..++
T Consensus 31 ~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~ 64 (273)
T PRK00192 31 KALKEKGIPVIPCTSKTAAEVEVLRKELGLEDPF 64 (273)
T ss_pred HHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCE
Confidence 9999999999999999999999999999987653
No 132
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=98.42 E-value=8.5e-07 Score=76.28 Aligned_cols=61 Identities=25% Similarity=0.326 Sum_probs=51.4
Q ss_pred CCceEEEEEcCCcccCCccHHHHHHHhCCChHHHhhcCCCChHHHHHHHHHHHHhCCCCHHHHHHHHhcCCCCCCHHHHH
Q 044553 1 MSGIVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTIEDIVEVLKRIPIHPRVVPAI 80 (275)
Q Consensus 1 m~~~~viFD~DGTL~d~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L 80 (275)
|++|+|+||+||||++.+. .+.|...+.|
T Consensus 1 m~~kli~~DlDGTLl~~~~---------------------------------------------------~i~~~~~~ai 29 (270)
T PRK10513 1 MAIKLIAIDMDGTLLLPDH---------------------------------------------------TISPAVKQAI 29 (270)
T ss_pred CceEEEEEecCCcCcCCCC---------------------------------------------------ccCHHHHHHH
Confidence 7789999999999987631 1235566889
Q ss_pred HHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcC
Q 044553 81 KSAHALGCELRIVSDANLFFIETILEHLGIRD 112 (275)
Q Consensus 81 ~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~ 112 (275)
++|+++|++++++|+.+...+...++.+++..
T Consensus 30 ~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 61 (270)
T PRK10513 30 AAARAKGVNVVLTTGRPYAGVHRYLKELHMEQ 61 (270)
T ss_pred HHHHHCCCEEEEecCCChHHHHHHHHHhCCCC
Confidence 99999999999999999999999999998753
No 133
>PTZ00445 p36-lilke protein; Provisional
Probab=98.38 E-value=1.1e-06 Score=71.43 Aligned_cols=110 Identities=13% Similarity=0.109 Sum_probs=74.4
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEeCCCH---------------HHHHHHHHHcCCcCCcceEecC-CCccCCCC----cee
Q 044553 72 IHPRVVPAIKSAHALGCELRIVSDANL---------------FFIETILEHLGIRDCFSEINTN-PGFVDEEG----RLR 131 (275)
Q Consensus 72 ~~pg~~e~L~~L~~~g~~~~IvS~~~~---------------~~i~~~l~~~gl~~~fd~i~~~-~~~~~~~g----~~~ 131 (275)
+.|.+..++..|++.|++++|||=+.. .+++..++..+-+.-...+++. +...+.+. .-.
T Consensus 76 ~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~s~~~~~i~~~~~yyp~~w~~p~~y~~~gl 155 (219)
T PTZ00445 76 VTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAALKKSKCDFKIKKVYAYYPKFWQEPSDYRPLGL 155 (219)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHHHhcCccceeeeeeeeCCcccCChhhhhhhcc
Confidence 468888999999999999999996543 3677788866554333444431 22111110 011
Q ss_pred ecccCCCCCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEee
Q 044553 132 IFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMP 197 (275)
Q Consensus 132 ~kp~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~ 197 (275)
.||.|. .|.--+++++.+++.. |+++++|.|+...+.+|.++|+..+.+.
T Consensus 156 ~KPdp~---------------iK~yHle~ll~~~gl~-peE~LFIDD~~~NVeaA~~lGi~ai~f~ 205 (219)
T PTZ00445 156 DAPMPL---------------DKSYHLKQVCSDFNVN-PDEILFIDDDMNNCKNALKEGYIALHVT 205 (219)
T ss_pred cCCCcc---------------chHHHHHHHHHHcCCC-HHHeEeecCCHHHHHHHHHCCCEEEEcC
Confidence 244442 2334458888888776 5899999999999999999998877764
No 134
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=98.37 E-value=4.4e-06 Score=65.82 Aligned_cols=104 Identities=18% Similarity=0.223 Sum_probs=72.4
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHc---CCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHL---GIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCN 146 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~---gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~ 146 (275)
..+||++.+.|++-++.|++++|-|+++-...+-.+.+. ++..+|+..+-... |. |-
T Consensus 102 ahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fghs~agdL~~lfsGyfDtti-----G~---Kr------------ 161 (229)
T COG4229 102 AHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFGHSDAGDLNSLFSGYFDTTI-----GK---KR------------ 161 (229)
T ss_pred cccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhcccccccHHhhhcceeeccc-----cc---cc------------
Confidence 679999999999999999999999999987777666543 34444444332110 00 10
Q ss_pred cCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCc
Q 044553 147 LCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNF 201 (275)
Q Consensus 147 ~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~ 201 (275)
......++....+.. |.+++++.|.+..+.+|+.+|......+|.|.
T Consensus 162 -------E~~SY~kIa~~iGl~-p~eilFLSDn~~EL~AA~~vGl~t~l~~R~g~ 208 (229)
T COG4229 162 -------ESQSYAKIAGDIGLP-PAEILFLSDNPEELKAAAGVGLATGLAVRPGN 208 (229)
T ss_pred -------cchhHHHHHHhcCCC-chheEEecCCHHHHHHHHhcchheeeeecCCC
Confidence 012233444443333 57999999999999999999998888887653
No 135
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=98.33 E-value=1.6e-06 Score=68.38 Aligned_cols=53 Identities=15% Similarity=0.222 Sum_probs=46.3
Q ss_pred cCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCc-CCc-ceEecCCC
Q 044553 69 RIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIR-DCF-SEINTNPG 122 (275)
Q Consensus 69 ~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~-~~f-d~i~~~~~ 122 (275)
.+.++||+.++|++|++. +.++|+|++...++..+++.++.. .+| +.+++.+.
T Consensus 56 ~v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~~~~F~~ri~~rd~ 110 (156)
T TIGR02250 56 LTKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPDGKYFGDRIISRDE 110 (156)
T ss_pred EEEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcCCCeeccEEEEecc
Confidence 467899999999999965 999999999999999999999988 478 66776554
No 136
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=98.33 E-value=2.2e-06 Score=71.90 Aligned_cols=91 Identities=16% Similarity=0.142 Sum_probs=57.7
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHH---HHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLF---FIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCN 146 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~---~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~ 146 (275)
..+.||+.++++.++++|+.|+++||.+.. ....-|+..|+..+ +.++- +....+.
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~-~~l~l-----------r~~~~~~--------- 172 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGW-DHLIL-----------RPDKDPS--------- 172 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTB-SCGEE-----------EEESSTS---------
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCcc-chhcc-----------ccccccc---------
Confidence 478899999999999999999999997544 44555677786543 33221 1100000
Q ss_pred cCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCccc
Q 044553 147 LCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCP 185 (275)
Q Consensus 147 ~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~ 185 (275)
.+.....|....+.+... +..-+.+|||..+|+..
T Consensus 173 ~~~~~~yK~~~r~~i~~~----Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 173 KKSAVEYKSERRKEIEKK----GYRIIANIGDQLSDFSG 207 (229)
T ss_dssp S------SHHHHHHHHHT----TEEEEEEEESSGGGCHC
T ss_pred cccccccchHHHHHHHHc----CCcEEEEeCCCHHHhhc
Confidence 001112366777776655 23456789999999976
No 137
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=98.32 E-value=3.2e-06 Score=63.00 Aligned_cols=85 Identities=16% Similarity=0.258 Sum_probs=66.4
Q ss_pred cCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcC
Q 044553 69 RIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLC 148 (275)
Q Consensus 69 ~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~ 148 (275)
.-.+|+.+.+.|+.|++. +.++|+|+...-.+...++-.|+.- +.+..... +
T Consensus 28 gGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~--~rv~a~a~-------------~------------ 79 (152)
T COG4087 28 GGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPV--ERVFAGAD-------------P------------ 79 (152)
T ss_pred CcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCce--eeeecccC-------------H------------
Confidence 357899999999999999 9999999998889999999889763 24442211 0
Q ss_pred CCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCccccccc
Q 044553 149 PPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKL 189 (275)
Q Consensus 149 ~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~ 189 (275)
..|..++..+... .+.|+||||+.||+.+-+.+
T Consensus 80 ---e~K~~ii~eLkk~-----~~k~vmVGnGaND~laLr~A 112 (152)
T COG4087 80 ---EMKAKIIRELKKR-----YEKVVMVGNGANDILALREA 112 (152)
T ss_pred ---HHHHHHHHHhcCC-----CcEEEEecCCcchHHHhhhc
Confidence 1278888888764 47999999999999777553
No 138
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=98.29 E-value=7.7e-06 Score=70.48 Aligned_cols=41 Identities=10% Similarity=0.208 Sum_probs=36.2
Q ss_pred CCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCC
Q 044553 73 HPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDC 113 (275)
Q Consensus 73 ~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~ 113 (275)
.+...+.|++|+++|++++++|+.+...+...++.++++.+
T Consensus 21 ~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~ 61 (272)
T PRK15126 21 GEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAY 61 (272)
T ss_pred CHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCc
Confidence 45566899999999999999999999999999999998644
No 139
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.25 E-value=7.4e-06 Score=70.33 Aligned_cols=46 Identities=13% Similarity=0.023 Sum_probs=38.3
Q ss_pred CCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCC
Q 044553 74 PRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNP 121 (275)
Q Consensus 74 pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~ 121 (275)
+.+.+.|++|+++|++++++|+.+...+..+.+.+++..+ .|..|.
T Consensus 21 ~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~p--~I~eNG 66 (302)
T PRK12702 21 GAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEHP--FICEDG 66 (302)
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCCe--EEEeCC
Confidence 4466899999999999999999999999999999998753 444443
No 140
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=98.24 E-value=7.6e-06 Score=78.82 Aligned_cols=90 Identities=27% Similarity=0.392 Sum_probs=72.4
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCP 149 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~ 149 (275)
-++.|++.+.++.|++.|+++.++|+.....++.+.+++|+++++..+ .|.
T Consensus 536 D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~v~Ael---------------lPe-------------- 586 (713)
T COG2217 536 DELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDEVRAEL---------------LPE-------------- 586 (713)
T ss_pred CCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHhheccC---------------CcH--------------
Confidence 478999999999999999999999999999999999999996542221 232
Q ss_pred CCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecC
Q 044553 150 PNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK 199 (275)
Q Consensus 150 ~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~ 199 (275)
.|.+.++++..+ + ..+.||||+.||-.+- ..+++.++-+
T Consensus 587 ---dK~~~V~~l~~~----g-~~VamVGDGINDAPAL---A~AdVGiAmG 625 (713)
T COG2217 587 ---DKAEIVRELQAE----G-RKVAMVGDGINDAPAL---AAADVGIAMG 625 (713)
T ss_pred ---HHHHHHHHHHhc----C-CEEEEEeCCchhHHHH---hhcCeeEeec
Confidence 389999999864 2 5899999999998655 3356666644
No 141
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=98.23 E-value=5.4e-06 Score=79.58 Aligned_cols=149 Identities=20% Similarity=0.199 Sum_probs=99.5
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCP 149 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~ 149 (275)
-++.|++.+.+++|++.|+++.++|+.....+..+.+++|++++ ++ +.+|.
T Consensus 440 Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~v----~A-----------~~~Pe-------------- 490 (673)
T PRK14010 440 DVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDRF----VA-----------ECKPE-------------- 490 (673)
T ss_pred cCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCceE----Ec-----------CCCHH--------------
Confidence 37899999999999999999999999999999999999999743 32 12332
Q ss_pred CCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecC-CchhhHHHhhCCCceeEEEeeCCChHHHH
Q 044553 150 PNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK-NFPLWDLIIRNPMLIKAEIHEWTDGEELE 228 (275)
Q Consensus 150 ~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~el~ 228 (275)
.|.++++.+..+ + ..+.|+||+.||-.+-++ +++.++-+ |. +...+..+. +..=++|..|.
T Consensus 491 ---dK~~iV~~lQ~~----G-~~VaMtGDGvNDAPALa~---ADVGIAMgsGT---dvAkeAADi----VLldd~ls~Iv 552 (673)
T PRK14010 491 ---DKINVIREEQAK----G-HIVAMTGDGTNDAPALAE---ANVGLAMNSGT---MSAKEAANL----IDLDSNPTKLM 552 (673)
T ss_pred ---HHHHHHHHHHhC----C-CEEEEECCChhhHHHHHh---CCEEEEeCCCC---HHHHHhCCE----EEcCCCHHHHH
Confidence 289999998764 2 578899999999976643 56666643 33 333333222 22225677776
Q ss_pred HHHH---HHHHHhccCCCCCccccc-Ccc--cccccccchhhcccCcc
Q 044553 229 QILL---HLVNTIGSTNNNNSAQLL-SAD--CKLQTISAAAHETLPQV 270 (275)
Q Consensus 229 ~~l~---~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~ 270 (275)
+.++ +++..++- -..++ +.| -=|-.+||..-...|+.
T Consensus 553 ~av~~gR~i~~n~~~-----~~~f~~~~~~~~~~~i~~a~~~~~~~~~ 595 (673)
T PRK14010 553 EVVLIGKQLLMTRGS-----LTTFSIANDIAKYFAILPAMFMAAMPAM 595 (673)
T ss_pred HHHHHHHHHHHHHHH-----HHheeeeccHHHHHHHHHHHHHHhcccc
Confidence 6665 44443311 01221 111 13566787777777763
No 142
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=98.21 E-value=7.9e-06 Score=78.52 Aligned_cols=151 Identities=17% Similarity=0.188 Sum_probs=103.1
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCP 149 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~ 149 (275)
-++.||+.+.++.|++.|+++.++|+.....++.+.+++|+++ +++ +..|.
T Consensus 444 D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~----v~A-----------~~~Pe-------------- 494 (679)
T PRK01122 444 DIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD----FLA-----------EATPE-------------- 494 (679)
T ss_pred ccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcE----EEc-----------cCCHH--------------
Confidence 3678999999999999999999999999999999999999964 332 11232
Q ss_pred CCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecC-CchhhHHHhhCCCceeEEEeeCCChHHHH
Q 044553 150 PNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK-NFPLWDLIIRNPMLIKAEIHEWTDGEELE 228 (275)
Q Consensus 150 ~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~el~ 228 (275)
.|.++++.+..+ + ..+.|+|||.||-.+-++ +++.++-+ |. +...+..+. +..=++|..|.
T Consensus 495 ---dK~~iV~~lQ~~----G-~~VaMtGDGvNDAPALa~---ADVGIAMgsGT---dvAkeAADi----VLldd~~s~Iv 556 (679)
T PRK01122 495 ---DKLALIRQEQAE----G-RLVAMTGDGTNDAPALAQ---ADVGVAMNSGT---QAAKEAGNM----VDLDSNPTKLI 556 (679)
T ss_pred ---HHHHHHHHHHHc----C-CeEEEECCCcchHHHHHh---CCEeEEeCCCC---HHHHHhCCE----EEeCCCHHHHH
Confidence 289999998765 2 578999999999976643 56666543 33 333333222 22236788887
Q ss_pred HHHHHHHHHhccCCCCCcccccCcccc----cccccchhhcccCcc
Q 044553 229 QILLHLVNTIGSTNNNNSAQLLSADCK----LQTISAAAHETLPQV 270 (275)
Q Consensus 229 ~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 270 (275)
+.++ +-.++.+| |-.....|+=|- |--|||..-...|+.
T Consensus 557 ~av~-~GR~~~~t--r~~~~~f~~~n~~~~~~~i~p~~~~~~~~~~ 599 (679)
T PRK01122 557 EVVE-IGKQLLMT--RGALTTFSIANDVAKYFAIIPAMFAATYPQL 599 (679)
T ss_pred HHHH-HHHHHHhh--hHhhhhhhHHHHHHHHHHHHHHHHHhhCccc
Confidence 7765 22333331 222233444454 577898888888874
No 143
>PRK10976 putative hydrolase; Provisional
Probab=98.20 E-value=5.5e-06 Score=71.09 Aligned_cols=41 Identities=17% Similarity=0.225 Sum_probs=34.4
Q ss_pred CCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCC
Q 044553 73 HPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDC 113 (275)
Q Consensus 73 ~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~ 113 (275)
.|...+.|++|+++|++++++|+.+...+...++.++++.+
T Consensus 21 s~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~ 61 (266)
T PRK10976 21 SPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIKSY 61 (266)
T ss_pred CHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCe
Confidence 34566889999999999999999998888888888888643
No 144
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=98.18 E-value=8e-06 Score=79.93 Aligned_cols=114 Identities=17% Similarity=0.143 Sum_probs=80.5
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCP 149 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~ 149 (275)
-+++|++.++|+.|++.|++++++|+.....++.+.+++|++.+ .. ..|.
T Consensus 567 d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~~~-----~~-----------~~p~-------------- 616 (741)
T PRK11033 567 DTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGIDFR-----AG-----------LLPE-------------- 616 (741)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCee-----cC-----------CCHH--------------
Confidence 47899999999999999999999999999999999999999522 11 1121
Q ss_pred CCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecC-CchhhHHHhhCCCceeEEEeeCCChHHHH
Q 044553 150 PNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK-NFPLWDLIIRNPMLIKAEIHEWTDGEELE 228 (275)
Q Consensus 150 ~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~el~ 228 (275)
.|..+++.+.. ...+.||||+.||..+.+.+ ++.++-+ +. +...+... . +..-+++.+|.
T Consensus 617 ---~K~~~v~~l~~------~~~v~mvGDgiNDapAl~~A---~vgia~g~~~---~~a~~~ad-i---vl~~~~l~~l~ 677 (741)
T PRK11033 617 ---DKVKAVTELNQ------HAPLAMVGDGINDAPAMKAA---SIGIAMGSGT---DVALETAD-A---ALTHNRLRGLA 677 (741)
T ss_pred ---HHHHHHHHHhc------CCCEEEEECCHHhHHHHHhC---CeeEEecCCC---HHHHHhCC-E---EEecCCHHHHH
Confidence 28888888763 24799999999999887554 4444433 22 22222221 1 33457777776
Q ss_pred HHHH
Q 044553 229 QILL 232 (275)
Q Consensus 229 ~~l~ 232 (275)
..++
T Consensus 678 ~~i~ 681 (741)
T PRK11033 678 QMIE 681 (741)
T ss_pred HHHH
Confidence 5554
No 145
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=98.18 E-value=1.2e-05 Score=77.23 Aligned_cols=151 Identities=16% Similarity=0.156 Sum_probs=100.3
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCP 149 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~ 149 (275)
-++.|++.+.+++|++.|+++.++|+.....+..+.+.+|+++ +++. ..|.
T Consensus 445 D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~----v~a~-----------~~Pe-------------- 495 (675)
T TIGR01497 445 DIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDD----FIAE-----------ATPE-------------- 495 (675)
T ss_pred ccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCE----EEcC-----------CCHH--------------
Confidence 3788999999999999999999999999999999999999864 3321 1232
Q ss_pred CCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecC-CchhhHHHhhCCCceeEEEeeCCChHHHH
Q 044553 150 PNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK-NFPLWDLIIRNPMLIKAEIHEWTDGEELE 228 (275)
Q Consensus 150 ~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~el~ 228 (275)
.|.+.++.+..+ ...+.|+||+.||..+-.. +++.++-. +. +...+..+. +..=++|..|.
T Consensus 496 ---dK~~~v~~lq~~-----g~~VamvGDG~NDapAL~~---AdvGiAm~~gt---~~akeaadi----vLldd~~s~Iv 557 (675)
T TIGR01497 496 ---DKIALIRQEQAE-----GKLVAMTGDGTNDAPALAQ---ADVGVAMNSGT---QAAKEAANM----VDLDSDPTKLI 557 (675)
T ss_pred ---HHHHHHHHHHHc-----CCeEEEECCCcchHHHHHh---CCEeEEeCCCC---HHHHHhCCE----EECCCCHHHHH
Confidence 289999998764 2579999999999987744 55555533 33 333332222 22336788877
Q ss_pred HHHHHHHHHhccCCCCCcccccCccc----ccccccchhhcccCcc
Q 044553 229 QILLHLVNTIGSTNNNNSAQLLSADC----KLQTISAAAHETLPQV 270 (275)
Q Consensus 229 ~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 270 (275)
+.++ +-..+-+| |...--.|+=| -|--|||..-...|+.
T Consensus 558 ~av~-~GR~~~~t--~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (675)
T TIGR01497 558 EVVH-IGKQLLIT--RGALTTFSIANDVAKYFAIIPAIFAAAYPQL 600 (675)
T ss_pred HHHH-HHHHHHHH--HHHHheeeecccHHHHHHHHHHHHHhhCcch
Confidence 7665 22222120 11111133333 3667888888888873
No 146
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=98.18 E-value=9.9e-06 Score=63.33 Aligned_cols=105 Identities=14% Similarity=0.107 Sum_probs=62.7
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCCHHH---HHHHHHHc-----CCcCCcceEecCCC-ccCCCCceeecccCCCCCC
Q 044553 71 PIHPRVVPAIKSAHALGCELRIVSDANLFF---IETILEHL-----GIRDCFSEINTNPG-FVDEEGRLRIFPFHDFTKC 141 (275)
Q Consensus 71 ~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~---i~~~l~~~-----gl~~~fd~i~~~~~-~~~~~g~~~~kp~~~~~~~ 141 (275)
..+||+.+++..++++||++.-+|+.+... .+..|... ++.+- .++.+.. .+..-......+.|
T Consensus 27 ~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~G--pv~~sP~~l~~al~rEvi~~~p----- 99 (157)
T PF08235_consen 27 WTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPDG--PVLLSPDSLFSALHREVISKDP----- 99 (157)
T ss_pred hhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCC--CEEECCcchhhhhhccccccCh-----
Confidence 357999999999999999999999987543 44455554 33221 2333321 11000000001111
Q ss_pred CCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCC
Q 044553 142 SHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 142 ~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
..-|...|+.+...+......-...+|++.+|+.+-.++|.
T Consensus 100 ---------~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGi 140 (157)
T PF08235_consen 100 ---------EEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGI 140 (157)
T ss_pred ---------HHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCC
Confidence 23388999988877542222345569999999977665554
No 147
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=98.15 E-value=3.1e-05 Score=65.74 Aligned_cols=50 Identities=16% Similarity=0.173 Sum_probs=37.6
Q ss_pred hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHH---HHHHHHHcCCcCCcceEe
Q 044553 68 KRIPIHPRVVPAIKSAHALGCELRIVSDANLFF---IETILEHLGIRDCFSEIN 118 (275)
Q Consensus 68 ~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~---i~~~l~~~gl~~~fd~i~ 118 (275)
...++.|++.++.+.+++.|++++++||..... ...-|++.|+..+ +.++
T Consensus 142 ~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~~-~~Li 194 (275)
T TIGR01680 142 GEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHTW-EKLI 194 (275)
T ss_pred ccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCCc-ceee
Confidence 357789999999999999999999999987543 3344555677543 4443
No 148
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=98.14 E-value=1.1e-05 Score=61.07 Aligned_cols=46 Identities=26% Similarity=0.326 Sum_probs=35.5
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCCHH---------------HHHHHHHHcCCcCCcceEe
Q 044553 71 PIHPRVVPAIKSAHALGCELRIVSDANLF---------------FIETILEHLGIRDCFSEIN 118 (275)
Q Consensus 71 ~~~pg~~e~L~~L~~~g~~~~IvS~~~~~---------------~i~~~l~~~gl~~~fd~i~ 118 (275)
.+.+++.+.|+.|+++|+.++++|+.+.. .+...|++.++. +|.++
T Consensus 24 ~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k~~ip--Yd~l~ 84 (126)
T TIGR01689 24 APILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQHNVP--YDEIY 84 (126)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchhhHHHHHHHHHHcCCC--CceEE
Confidence 46788889999999999999999998654 445667777774 46665
No 149
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=98.13 E-value=3.2e-05 Score=75.80 Aligned_cols=73 Identities=18% Similarity=0.166 Sum_probs=49.6
Q ss_pred CCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHH
Q 044553 148 CPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEEL 227 (275)
Q Consensus 148 ~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el 227 (275)
.|.+..|..+++.++... +++.++++||+.||..+-..++...+.++-++. + ..| ....++..|+
T Consensus 652 ~p~~vnKG~al~~ll~~~---~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~---------~--s~A-~~~l~~~~eV 716 (726)
T PRK14501 652 RPAGVNKGRAVRRLLEAG---PYDFVLAIGDDTTDEDMFRALPETAITVKVGPG---------E--SRA-RYRLPSQREV 716 (726)
T ss_pred EECCCCHHHHHHHHHhcC---CCCEEEEECCCCChHHHHHhcccCceEEEECCC---------C--Ccc-eEeCCCHHHH
Confidence 367788999999998732 357999999999999887655433444433321 0 122 3356888888
Q ss_pred HHHHHHHH
Q 044553 228 EQILLHLV 235 (275)
Q Consensus 228 ~~~l~~~~ 235 (275)
...|+.+.
T Consensus 717 ~~~L~~l~ 724 (726)
T PRK14501 717 RELLRRLL 724 (726)
T ss_pred HHHHHHHh
Confidence 88887654
No 150
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=98.07 E-value=4.6e-05 Score=62.94 Aligned_cols=122 Identities=17% Similarity=0.191 Sum_probs=76.1
Q ss_pred ceEEEEEcCCcccCCccHHHHHHHhCCChHHHhhcCCCChHHHHHHHHHHHHhCCCCHHHHHHHH--hcCCCCCCHHHHH
Q 044553 3 GIVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTIEDIVEVL--KRIPIHPRVVPAI 80 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~pg~~e~L 80 (275)
+++|+.|+|.|++|..+..-..-. ...+.+.+.+..++ ....+.||+.||+
T Consensus 79 ~~aVvlDlDETvLdNs~Yqgy~v~---------------------------nnk~f~pe~Wd~wV~a~~sk~vpGA~eFl 131 (274)
T COG2503 79 KKAVVLDLDETVLDNSAYQGYQVL---------------------------NNKGFTPETWDKWVQAKKSKAVPGAVEFL 131 (274)
T ss_pred CceEEEecchHhhcCccccchhhh---------------------------cCCCCCccchHHHHhhcccccCccHHHHH
Confidence 569999999999999763211110 01122222222222 3477899999999
Q ss_pred HHHHHcCCcEEEEeCCCHHH----HHHHHHHcCCcCCcc-eEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchH
Q 044553 81 KSAHALGCELRIVSDANLFF----IETILEHLGIRDCFS-EINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKG 155 (275)
Q Consensus 81 ~~L~~~g~~~~IvS~~~~~~----i~~~l~~~gl~~~fd-~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~ 155 (275)
.+..++|..++.+||..... ...-|.+.|+...-. +++ .|-. ...|.
T Consensus 132 ~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~~~~l-------------lkk~---------------~k~Ke 183 (274)
T COG2503 132 NYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLESHLL-------------LKKD---------------KKSKE 183 (274)
T ss_pred HHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccccccceE-------------EeeC---------------CCcHH
Confidence 99999999999999987665 333455667754321 121 1100 12255
Q ss_pred HHHHHHHHhhhcCCCCeEEEEcCCCCCcc
Q 044553 156 VVIERIQASLSKEGNKKIIYLGDGSGDYC 184 (275)
Q Consensus 156 ~~l~~~~~~~~~~~~~~~i~vGDs~~Di~ 184 (275)
...+..... ..-+++|||...|+.
T Consensus 184 ~R~~~v~k~-----~~iVm~vGDNl~DF~ 207 (274)
T COG2503 184 VRRQAVEKD-----YKIVMLVGDNLDDFG 207 (274)
T ss_pred HHHHHHhhc-----cceeeEecCchhhhc
Confidence 555555443 467889999999984
No 151
>PTZ00174 phosphomannomutase; Provisional
Probab=98.06 E-value=1.5e-05 Score=67.77 Aligned_cols=56 Identities=20% Similarity=0.355 Sum_probs=44.3
Q ss_pred CCceEEEEEcCCcccCCccHHHHHHHhCCChHHHhhcCCCChHHHHHHHHHHHHhCCCCHHHHHHHHhcCCCCCCHHHHH
Q 044553 1 MSGIVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTIEDIVEVLKRIPIHPRVVPAI 80 (275)
Q Consensus 1 m~~~~viFD~DGTL~d~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L 80 (275)
|.+|+|+||+||||++++. .+.|...++|
T Consensus 3 ~~~klia~DlDGTLL~~~~---------------------------------------------------~is~~~~~ai 31 (247)
T PTZ00174 3 MKKTILLFDVDGTLTKPRN---------------------------------------------------PITQEMKDTL 31 (247)
T ss_pred CCCeEEEEECcCCCcCCCC---------------------------------------------------CCCHHHHHHH
Confidence 6689999999999998742 1234456888
Q ss_pred HHHHHcCCcEEEEeCCCHHHHHHHHHH
Q 044553 81 KSAHALGCELRIVSDANLFFIETILEH 107 (275)
Q Consensus 81 ~~L~~~g~~~~IvS~~~~~~i~~~l~~ 107 (275)
+.++++|+.++++|+.+...+...++.
T Consensus 32 ~~l~~~Gi~~viaTGR~~~~i~~~l~~ 58 (247)
T PTZ00174 32 AKLKSKGFKIGVVGGSDYPKIKEQLGE 58 (247)
T ss_pred HHHHHCCCEEEEEcCCCHHHHHHHHhh
Confidence 999999999999999988777666653
No 152
>PLN02580 trehalose-phosphatase
Probab=98.03 E-value=0.00011 Score=65.96 Aligned_cols=78 Identities=24% Similarity=0.204 Sum_probs=50.1
Q ss_pred CCCchHHHHHHHHHhhhcCCCCe--EEEEcCCCCCcccccccCC--CCeEeecCCchhhHHHhhCCCceeEEEeeCCChH
Q 044553 150 PNMCKGVVIERIQASLSKEGNKK--IIYLGDGSGDYCPSLKLSE--GDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGE 225 (275)
Q Consensus 150 ~~~~K~~~l~~~~~~~~~~~~~~--~i~vGDs~~Di~~a~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 225 (275)
.+..|..+++.++..++....+. .+||||..||..+-..+.. .++.+.-++. +....| ....++..
T Consensus 298 ~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~---------~~~t~A-~y~L~dp~ 367 (384)
T PLN02580 298 IDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSV---------PKESNA-FYSLRDPS 367 (384)
T ss_pred CCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecC---------CCCccc-eEEcCCHH
Confidence 37889999999999876543223 4899999999976643221 1233221110 011223 33689999
Q ss_pred HHHHHHHHHHHH
Q 044553 226 ELEQILLHLVNT 237 (275)
Q Consensus 226 el~~~l~~~~~~ 237 (275)
|+.++|+.+..-
T Consensus 368 eV~~~L~~L~~~ 379 (384)
T PLN02580 368 EVMEFLKSLVTW 379 (384)
T ss_pred HHHHHHHHHHHh
Confidence 999999988753
No 153
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=98.02 E-value=4.4e-05 Score=76.56 Aligned_cols=142 Identities=15% Similarity=0.111 Sum_probs=81.6
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcc----eEecCCCccCCCCceeecccCCCCCCCCCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFS----EINTNPGFVDEEGRLRIFPFHDFTKCSHGC 145 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd----~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~ 145 (275)
-+++|++.++|+.|++.|+++.++|+.....+..+.+.+|+...-. ..+++.....-+.....+-... ..-+
T Consensus 536 Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~----~~v~ 611 (917)
T TIGR01116 536 DPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRS----AVLF 611 (917)
T ss_pred CCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhc----CeEE
Confidence 3689999999999999999999999999999999999999853211 1222111000000000000000 0000
Q ss_pred CcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecC-CchhhHHHhhCCCceeEEEeeCCCh
Q 044553 146 NLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK-NFPLWDLIIRNPMLIKAEIHEWTDG 224 (275)
Q Consensus 146 ~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~ 224 (275)
..+ ....|.++++.+... .+.+.|+|||.||+.+.+. +++.++-+ +. +...+.... +..=++|
T Consensus 612 ar~-~P~~K~~iV~~lq~~-----g~~va~iGDG~ND~~alk~---AdVGia~g~g~---~~ak~aAD~----vl~dd~f 675 (917)
T TIGR01116 612 SRV-EPSHKSELVELLQEQ-----GEIVAMTGDGVNDAPALKK---ADIGIAMGSGT---EVAKEASDM----VLADDNF 675 (917)
T ss_pred Eec-CHHHHHHHHHHHHhc-----CCeEEEecCCcchHHHHHh---CCeeEECCCCc---HHHHHhcCe----EEccCCH
Confidence 000 112388888877643 2688899999999988855 44455432 32 333222221 1112458
Q ss_pred HHHHHHH
Q 044553 225 EELEQIL 231 (275)
Q Consensus 225 ~el~~~l 231 (275)
..|...+
T Consensus 676 ~~i~~~i 682 (917)
T TIGR01116 676 ATIVAAV 682 (917)
T ss_pred HHHHHHH
Confidence 8877766
No 154
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=98.00 E-value=1.9e-05 Score=65.79 Aligned_cols=36 Identities=14% Similarity=0.254 Sum_probs=33.7
Q ss_pred HHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCc
Q 044553 76 VVPAIKSAHALGCELRIVSDANLFFIETILEHLGIR 111 (275)
Q Consensus 76 ~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~ 111 (275)
..++|+.|+++|++++++||++...++.+++.+++.
T Consensus 21 ~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 21 AAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 568999999999999999999999999999999986
No 155
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=98.00 E-value=5.7e-05 Score=72.95 Aligned_cols=117 Identities=16% Similarity=0.236 Sum_probs=82.4
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCP 149 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~ 149 (275)
-++.|++..+++.|++.|++++++|+.....++.+.++.|+ +.|++. .+|..
T Consensus 722 D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi----~~V~ae-----------v~P~~------------- 773 (951)
T KOG0207|consen 722 DQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGI----DNVYAE-----------VLPEQ------------- 773 (951)
T ss_pred cccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCc----ceEEec-----------cCchh-------------
Confidence 47889999999999999999999999999999999999994 566652 24433
Q ss_pred CCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHHHH
Q 044553 150 PNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQ 229 (275)
Q Consensus 150 ~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el~~ 229 (275)
|.+.++++..+ ...+.||||+.||-.+... +++.++-... .+..-+-.+. ++.-++..++..
T Consensus 774 ----K~~~Ik~lq~~-----~~~VaMVGDGINDaPALA~---AdVGIaig~g--s~vAieaADI----VLmrn~L~~v~~ 835 (951)
T KOG0207|consen 774 ----KAEKIKEIQKN-----GGPVAMVGDGINDAPALAQ---ADVGIAIGAG--SDVAIEAADI----VLMRNDLRDVPF 835 (951)
T ss_pred ----hHHHHHHHHhc-----CCcEEEEeCCCCccHHHHh---hccceeeccc--cHHHHhhCCE----EEEccchhhhHH
Confidence 88999999875 2479999999999865432 4444432221 1333222211 333456666666
Q ss_pred HHH
Q 044553 230 ILL 232 (275)
Q Consensus 230 ~l~ 232 (275)
.+.
T Consensus 836 ai~ 838 (951)
T KOG0207|consen 836 AID 838 (951)
T ss_pred HHH
Confidence 665
No 156
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=98.00 E-value=5.4e-05 Score=64.43 Aligned_cols=106 Identities=21% Similarity=0.199 Sum_probs=68.1
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHH---HcCCcCCcceEecCCCccCCCCceeec--ccCCCCCCCCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILE---HLGIRDCFSEINTNPGFVDEEGRLRIF--PFHDFTKCSHG 144 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~---~~gl~~~fd~i~~~~~~~~~~g~~~~k--p~~~~~~~~~~ 144 (275)
-..-+.+.++++.|+.+|+++..+|.....+....++ ++|++ |+.-. +..++.+..- +........+.
T Consensus 80 ~lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~--fs~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 152 (252)
T PF11019_consen 80 ELIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGID--FSSSS-----FPEDGIISFPVFDSALSRAPSFY 152 (252)
T ss_pred EEcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCC--ccccc-----cccCcceecccccCCCCCCceee
Confidence 3456889999999999999999999987666555544 46664 33221 1122222110 00000011122
Q ss_pred CCc-CCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCc
Q 044553 145 CNL-CPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDY 183 (275)
Q Consensus 145 ~~~-~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di 183 (275)
.++ +..+..|+.++..++...+.. |+.+|||.|+...+
T Consensus 153 ~GIlft~~~~KG~~L~~fL~~~~~~-pk~IIfIDD~~~nl 191 (252)
T PF11019_consen 153 DGILFTGGQDKGEVLKYFLDKINQS-PKKIIFIDDNKENL 191 (252)
T ss_pred cCeEEeCCCccHHHHHHHHHHcCCC-CCeEEEEeCCHHHH
Confidence 233 456788999999999998766 58999999997766
No 157
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=97.99 E-value=6.2e-05 Score=75.02 Aligned_cols=138 Identities=17% Similarity=0.181 Sum_probs=85.1
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCC-ceee-cccCCCCCCCCCCCcC
Q 044553 71 PIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEG-RLRI-FPFHDFTKCSHGCNLC 148 (275)
Q Consensus 71 ~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g-~~~~-kp~~~~~~~~~~~~~~ 148 (275)
++.|++.+.++.|++.|+++.++|+.....+..+.+++|+.. +.++++......+. .+.. -+....+...
T Consensus 515 p~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~--~~v~~g~~l~~~~~~el~~~~~~~~vfAr~------ 586 (867)
T TIGR01524 515 PPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA--NDFLLGADIEELSDEELARELRKYHIFARL------ 586 (867)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC--CCeeecHhhhhCCHHHHHHHhhhCeEEEEC------
Confidence 678999999999999999999999999999999999999962 13333322110000 0000 0000000000
Q ss_pred CCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecC-CchhhHHHhhCCCceeEEEeeCCChHHH
Q 044553 149 PPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK-NFPLWDLIIRNPMLIKAEIHEWTDGEEL 227 (275)
Q Consensus 149 ~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~el 227 (275)
....|.++++.+..+ + ..+.|+|||.||..+-+. +++.++-+ |. +...+.... ++.=++|..+
T Consensus 587 -~Pe~K~~iV~~lq~~----G-~vVam~GDGvNDapALk~---AdVGIAmg~gt---dvAk~aADi----VLldd~~~~I 650 (867)
T TIGR01524 587 -TPMQKSRIIGLLKKA----G-HTVGFLGDGINDAPALRK---ADVGISVDTAA---DIAKEASDI----ILLEKSLMVL 650 (867)
T ss_pred -CHHHHHHHHHHHHhC----C-CEEEEECCCcccHHHHHh---CCEEEEeCCcc---HHHHHhCCE----EEecCChHHH
Confidence 112389999998764 2 578899999999987644 56666544 33 333332222 2223667777
Q ss_pred HHHHH
Q 044553 228 EQILL 232 (275)
Q Consensus 228 ~~~l~ 232 (275)
...++
T Consensus 651 ~~ai~ 655 (867)
T TIGR01524 651 EEGVI 655 (867)
T ss_pred HHHHH
Confidence 66655
No 158
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=97.99 E-value=2.6e-05 Score=65.37 Aligned_cols=47 Identities=26% Similarity=0.197 Sum_probs=38.6
Q ss_pred CCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCC
Q 044553 74 PRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPG 122 (275)
Q Consensus 74 pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~ 122 (275)
+++.++|+.|+++|++++++|+.+...+...++.+|+..+ .|..|..
T Consensus 18 ~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~~--~I~~NGa 64 (225)
T TIGR02461 18 GPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEPP--FIVENGG 64 (225)
T ss_pred hHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCc--EEEcCCc
Confidence 4577999999999999999999999999999999998643 3444443
No 159
>PLN02887 hydrolase family protein
Probab=97.98 E-value=2.4e-05 Score=74.05 Aligned_cols=39 Identities=18% Similarity=0.182 Sum_probs=34.4
Q ss_pred CCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCc
Q 044553 73 HPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIR 111 (275)
Q Consensus 73 ~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~ 111 (275)
.+...+.|+.|+++|+.++|+|+.+...+...++.+++.
T Consensus 327 s~~t~eAI~kl~ekGi~~vIATGR~~~~i~~~l~~L~l~ 365 (580)
T PLN02887 327 SETNAKALKEALSRGVKVVIATGKARPAVIDILKMVDLA 365 (580)
T ss_pred CHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCcc
Confidence 355668999999999999999999999999999998875
No 160
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=97.97 E-value=5.3e-05 Score=75.67 Aligned_cols=139 Identities=16% Similarity=0.196 Sum_probs=85.3
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCC-cee-ecccCCCCCCCCCCCc
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEG-RLR-IFPFHDFTKCSHGCNL 147 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g-~~~-~kp~~~~~~~~~~~~~ 147 (275)
-++.|++.+.++.|++.|+++.++|+.....+..+.+++|+.. +.++++.....-++ .+. .-+....+...
T Consensus 549 Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~--~~v~~G~el~~l~~~el~~~~~~~~VfAr~----- 621 (902)
T PRK10517 549 DPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA--GEVLIGSDIETLSDDELANLAERTTLFARL----- 621 (902)
T ss_pred CcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc--cCceeHHHHHhCCHHHHHHHHhhCcEEEEc-----
Confidence 3678999999999999999999999999999999999999952 23444322110000 000 00000000000
Q ss_pred CCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecC-CchhhHHHhhCCCceeEEEeeCCChHH
Q 044553 148 CPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK-NFPLWDLIIRNPMLIKAEIHEWTDGEE 226 (275)
Q Consensus 148 ~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~e 226 (275)
....|.++++.+..+ + ..+.|+|||.||..+-++ +++.++-+ |. +...+.... ++.=++|..
T Consensus 622 --sPe~K~~IV~~Lq~~----G-~vVam~GDGvNDaPALk~---ADVGIAmg~gt---dvAkeaADi----VLldd~~~~ 684 (902)
T PRK10517 622 --TPMHKERIVTLLKRE----G-HVVGFMGDGINDAPALRA---ADIGISVDGAV---DIAREAADI----ILLEKSLMV 684 (902)
T ss_pred --CHHHHHHHHHHHHHC----C-CEEEEECCCcchHHHHHh---CCEEEEeCCcC---HHHHHhCCE----EEecCChHH
Confidence 012389999998864 2 578899999999977643 56666644 22 333332222 222366777
Q ss_pred HHHHHH
Q 044553 227 LEQILL 232 (275)
Q Consensus 227 l~~~l~ 232 (275)
|...++
T Consensus 685 I~~ai~ 690 (902)
T PRK10517 685 LEEGVI 690 (902)
T ss_pred HHHHHH
Confidence 665554
No 161
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=97.97 E-value=9.1e-05 Score=58.32 Aligned_cols=97 Identities=14% Similarity=0.048 Sum_probs=61.3
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHH---H-HHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCc
Q 044553 72 IHPRVVPAIKSAHALGCELRIVSDANLFFIETI---L-EHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNL 147 (275)
Q Consensus 72 ~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~---l-~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~ 147 (275)
|-+-++++|....++|-.++.+|+.+.--++.+ | +.+.+......+++++ ||.|.-
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~pv~f~Gd-----------k~k~~q--------- 174 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNPVIFAGD-----------KPKPGQ--------- 174 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCcceeeccC-----------CCCccc---------
Confidence 345577889999999999999999765433332 2 3345544433444433 232210
Q ss_pred CCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCc
Q 044553 148 CPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNF 201 (275)
Q Consensus 148 ~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~ 201 (275)
..|.. ++.. ..--|++|||.+||-+|+.+|..++-+-|...
T Consensus 175 ----y~Kt~----~i~~-----~~~~IhYGDSD~Di~AAkeaG~RgIRilRAaN 215 (237)
T COG3700 175 ----YTKTQ----WIQD-----KNIRIHYGDSDNDITAAKEAGARGIRILRAAN 215 (237)
T ss_pred ----ccccH----HHHh-----cCceEEecCCchhhhHHHhcCccceeEEecCC
Confidence 11233 2222 13568999999999999999999888877543
No 162
>KOG3128 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.96 E-value=2e-05 Score=65.28 Aligned_cols=121 Identities=19% Similarity=0.144 Sum_probs=81.7
Q ss_pred CCCCHHHHHHHHhc--CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceee-
Q 044553 56 QGKTIEDIVEVLKR--IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRI- 132 (275)
Q Consensus 56 ~~~~~~~~~~~~~~--~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~- 132 (275)
.+.+...+.+.+++ +.+.+|..++++.|+++++|+.|.|.|....++.++++...-..+-.++|+-..++.+|...+
T Consensus 121 ~~f~k~~I~~~Va~s~i~lReg~~~ff~~L~~~~IP~~iFSAGigdiiEev~~q~~~~~pn~k~vSN~~~F~edg~l~gF 200 (298)
T KOG3128|consen 121 GGFSKNAIDDIVAESNIALREGYEEFFEALQAHEIPLLIFSAGIGDIIEEVTRQKLVLHPNVKFVSNYMDFDEDGNLCGF 200 (298)
T ss_pred CCcCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCceEEEecchHHHHHHHHHHHhccCccHHhhhhhhhhcccchhhhh
Confidence 35566677766654 678899999999999999999999999999999998875333336778888887877776432
Q ss_pred -cccCCCCCCCCCCCcCCCCCchHHHHHHHHHhhh-cCCCCeEEEEcCCCCCcccccc
Q 044553 133 -FPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLS-KEGNKKIIYLGDGSGDYCPSLK 188 (275)
Q Consensus 133 -kp~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~-~~~~~~~i~vGDs~~Di~~a~~ 188 (275)
+|....+.+. ..+++.-...+. ..+...+++.|||..|+.+|..
T Consensus 201 ~~~Lihtfnkn------------~~v~~~~s~yf~~~~~~~nVillGdsigdl~ma~g 246 (298)
T KOG3128|consen 201 SQPLIHTFNKN------------SSVLQNESEYFHQLAGRVNVILLGDSIGDLHMADG 246 (298)
T ss_pred hHHHHHHHccc------------hHHHHhhhHHHhhccCCceEEEeccccccchhhcC
Confidence 2222211110 122222222221 2235799999999999988743
No 163
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=97.95 E-value=4.5e-05 Score=76.18 Aligned_cols=138 Identities=18% Similarity=0.199 Sum_probs=85.0
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCC-ceee-cccCCCCCCCCCCCcC
Q 044553 71 PIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEG-RLRI-FPFHDFTKCSHGCNLC 148 (275)
Q Consensus 71 ~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g-~~~~-kp~~~~~~~~~~~~~~ 148 (275)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+.. +.++++.....-+. .+.. -+....+...
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~--~~vi~G~el~~~~~~el~~~v~~~~VfAr~------ 621 (903)
T PRK15122 550 PPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP--GEPLLGTEIEAMDDAALAREVEERTVFAKL------ 621 (903)
T ss_pred ccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC--CCccchHhhhhCCHHHHHHHhhhCCEEEEe------
Confidence 688999999999999999999999999999999999999952 23333322110000 0000 0000000000
Q ss_pred CCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecC-CchhhHHHhhCCCceeEEEeeCCChHHH
Q 044553 149 PPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK-NFPLWDLIIRNPMLIKAEIHEWTDGEEL 227 (275)
Q Consensus 149 ~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~el 227 (275)
....|.++++.+..+ + ..+.|+|||.||..+-+. +++.++-+ |. +...+.... ++.=++|..|
T Consensus 622 -sPe~K~~iV~~Lq~~----G-~vVamtGDGvNDaPALk~---ADVGIAmg~gt---dvAkeaADi----VLldd~f~~I 685 (903)
T PRK15122 622 -TPLQKSRVLKALQAN----G-HTVGFLGDGINDAPALRD---ADVGISVDSGA---DIAKESADI----ILLEKSLMVL 685 (903)
T ss_pred -CHHHHHHHHHHHHhC----C-CEEEEECCCchhHHHHHh---CCEEEEeCccc---HHHHHhcCE----EEecCChHHH
Confidence 012389999998864 3 578999999999977643 56666543 33 333332222 2222667777
Q ss_pred HHHHH
Q 044553 228 EQILL 232 (275)
Q Consensus 228 ~~~l~ 232 (275)
...++
T Consensus 686 v~ai~ 690 (903)
T PRK15122 686 EEGVI 690 (903)
T ss_pred HHHHH
Confidence 66655
No 164
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.94 E-value=3.8e-05 Score=66.19 Aligned_cols=38 Identities=11% Similarity=0.155 Sum_probs=34.3
Q ss_pred CCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCc
Q 044553 74 PRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIR 111 (275)
Q Consensus 74 pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~ 111 (275)
+...+.|+.|+++|++++++|+.+...+..+++.+|++
T Consensus 27 ~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~ 64 (271)
T PRK03669 27 QPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQ 64 (271)
T ss_pred HHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCC
Confidence 44668899999999999999999999999999999985
No 165
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=97.94 E-value=6.6e-05 Score=73.74 Aligned_cols=137 Identities=20% Similarity=0.174 Sum_probs=82.6
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCc-------ee-ecccCCCCCCC
Q 044553 71 PIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGR-------LR-IFPFHDFTKCS 142 (275)
Q Consensus 71 ~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~-------~~-~kp~~~~~~~~ 142 (275)
++.|++.++++.|++.|+++.++|+.....++.+.+++|+... +++.+.....+.. +. .-.....+...
T Consensus 442 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~ 518 (755)
T TIGR01647 442 PPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTN---IYTADVLLKGDNRDDLPSGELGEMVEDADGFAEV 518 (755)
T ss_pred CChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCC---CcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEec
Confidence 6889999999999999999999999999999999999999642 2222211000000 00 00000000000
Q ss_pred CCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecC-CchhhHHHhhCCCceeEEEeeC
Q 044553 143 HGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK-NFPLWDLIIRNPMLIKAEIHEW 221 (275)
Q Consensus 143 ~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~ 221 (275)
....|.++++.+..+ + ..+.|+|||.||..+-+. +++.++-+ +. +...+.... ++.=
T Consensus 519 -------~Pe~K~~iV~~lq~~----G-~~VamvGDGvNDapAL~~---AdVGIAm~~gt---dvAkeaADi----vLl~ 576 (755)
T TIGR01647 519 -------FPEHKYEIVEILQKR----G-HLVGMTGDGVNDAPALKK---ADVGIAVAGAT---DAARSAADI----VLTE 576 (755)
T ss_pred -------CHHHHHHHHHHHHhc----C-CEEEEEcCCcccHHHHHh---CCeeEEecCCc---HHHHHhCCE----EEEc
Confidence 112389999998764 3 579999999999976644 55555533 32 333332222 2223
Q ss_pred CChHHHHHHHH
Q 044553 222 TDGEELEQILL 232 (275)
Q Consensus 222 ~~~~el~~~l~ 232 (275)
+++..+...++
T Consensus 577 d~l~~I~~ai~ 587 (755)
T TIGR01647 577 PGLSVIVDAIL 587 (755)
T ss_pred CChHHHHHHHH
Confidence 56666655554
No 166
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=97.94 E-value=0.00016 Score=59.16 Aligned_cols=105 Identities=10% Similarity=0.085 Sum_probs=68.8
Q ss_pred EEEEcCCcccCCccHHHHHHHhCC------------ChHHH--hhcCCCChHHHHHHHHHHHHhCCCCHHHHHHHHhc-C
Q 044553 6 VIFDFDKTIIDCDSDNFVVDELGA------------TDLFN--QLLPTMPWNSLMDRMMKELHSQGKTIEDIVEVLKR-I 70 (275)
Q Consensus 6 viFD~DGTL~d~~~~~~~~~~~g~------------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 70 (275)
++|||.|.+.-++....++..+=. +.... ....+..-...+.-+...+-.++.+.+.++++.+. .
T Consensus 3 fvtD~EGP~sl~D~A~E~~a~~~pngrrfF~~~SeyDD~la~E~rReGYeaG~TLkLivPFL~ahGVt~~dlrr~sE~sa 82 (315)
T COG4030 3 FVTDWEGPWSLTDFALELCAAVFPNGRRFFSNLSEYDDYLAYEVRREGYEAGYTLKLIVPFLAAHGVTNRDLRRISELSA 82 (315)
T ss_pred ccccCCCCCccchhHHHHHHHHcCCHHHHHHhhhhhhhHHHHHHhccCCCCCcchhhHHHHHHHhcCcHHHHHHHHHhhc
Confidence 789999999988754333322211 11111 11111111222333444444567777777777665 8
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCc
Q 044553 71 PIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIR 111 (275)
Q Consensus 71 ~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~ 111 (275)
.+.||+.++++.|+++ .+-+|+|.+..++++++...+|+.
T Consensus 83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~P 122 (315)
T COG4030 83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVP 122 (315)
T ss_pred ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCC
Confidence 8999999999999886 677788888999999999999984
No 167
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=97.94 E-value=5.2e-06 Score=57.01 Aligned_cols=69 Identities=13% Similarity=0.024 Sum_probs=47.1
Q ss_pred hHHHHHHHHHhhhcCCCCeEEEEcCC-CCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHH
Q 044553 154 KGVVIERIQASLSKEGNKKIIYLGDG-SGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEEL 227 (275)
Q Consensus 154 K~~~l~~~~~~~~~~~~~~~i~vGDs-~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el 227 (275)
...+++.++..++.. +++++||||+ .+||.+|+++|+..+.+..+.+....+... ...+ ...++++.|+
T Consensus 6 ~p~~~~~a~~~~~~~-~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~-~~~p---d~vv~~l~e~ 75 (75)
T PF13242_consen 6 SPGMLEQALKRLGVD-PSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKA-EHKP---DYVVDDLKEA 75 (75)
T ss_dssp SHHHHHHHHHHHTSG-GGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHS-SSTT---SEEESSGGGH
T ss_pred cHHHHHHHHHHcCCC-HHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhcc-CCCC---CEEECCHHhC
Confidence 347788888887655 5899999999 999999999999777776654443333321 1112 1256777664
No 168
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=97.91 E-value=0.00014 Score=69.81 Aligned_cols=140 Identities=17% Similarity=0.120 Sum_probs=87.9
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcc----eEecCCCccCC-C-Cce-eecccCCCCCCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFS----EINTNPGFVDE-E-GRL-RIFPFHDFTKCS 142 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd----~i~~~~~~~~~-~-g~~-~~kp~~~~~~~~ 142 (275)
-+|+|++.+.++.|++.|+++.++|+.....+..+.+++|+...-+ ..+++.. ++. + ... ..+...-.
T Consensus 583 DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~e-fD~ls~~~~~~~~~~~~v---- 657 (972)
T KOG0202|consen 583 DPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMALTGSE-FDDLSDEELDDAVRRVLV---- 657 (972)
T ss_pred CCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccccchhh-hhcCCHHHHHHHhhcceE----
Confidence 4789999999999999999999999999999999999999865433 2333222 110 0 000 00000000
Q ss_pred CCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEee--cCCchhhHHHhhCCCceeEEEee
Q 044553 143 HGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMP--RKNFPLWDLIIRNPMLIKAEIHE 220 (275)
Q Consensus 143 ~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~ 220 (275)
..+|.+ .-|.++++.+... -+-+-|-|||+||-.+.+. +++.++ ..|..+.+-. ... ++.
T Consensus 658 --FaR~~P-~HK~kIVeaLq~~-----geivAMTGDGVNDApALK~---AdIGIAMG~~GTdVaKeA---sDM----VL~ 719 (972)
T KOG0202|consen 658 --FARAEP-QHKLKIVEALQSR-----GEVVAMTGDGVNDAPALKK---ADIGIAMGISGTDVAKEA---SDM----VLA 719 (972)
T ss_pred --EEecCc-hhHHHHHHHHHhc-----CCEEEecCCCccchhhhhh---cccceeecCCccHhhHhh---hhc----EEe
Confidence 000111 2289999988765 2678899999999977654 444444 4455333322 112 344
Q ss_pred CCChHHHHHHHH
Q 044553 221 WTDGEELEQILL 232 (275)
Q Consensus 221 ~~~~~el~~~l~ 232 (275)
=++|+.+...++
T Consensus 720 DDnFstIvaAVE 731 (972)
T KOG0202|consen 720 DDNFSTIVAAVE 731 (972)
T ss_pred cCcHHHHHHHHH
Confidence 578888777665
No 169
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=97.91 E-value=3.8e-05 Score=65.52 Aligned_cols=40 Identities=18% Similarity=0.310 Sum_probs=35.0
Q ss_pred CCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcC
Q 044553 73 HPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRD 112 (275)
Q Consensus 73 ~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~ 112 (275)
.+...+.|++|+++|++++++|+.+...+...++.+++..
T Consensus 18 ~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~ 57 (256)
T TIGR00099 18 SPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLDT 57 (256)
T ss_pred CHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCCC
Confidence 4566789999999999999999999999999999988763
No 170
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=97.91 E-value=9.7e-05 Score=74.36 Aligned_cols=139 Identities=15% Similarity=0.147 Sum_probs=84.8
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCC-ceee-cccCCCCCCCCCCCcC
Q 044553 71 PIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEG-RLRI-FPFHDFTKCSHGCNLC 148 (275)
Q Consensus 71 ~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g-~~~~-kp~~~~~~~~~~~~~~ 148 (275)
++.|++.++++.|++.|+++.++|+.....+..+.+.+|+..--..++++........ .+.. -+....+.. +
T Consensus 579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar------~ 652 (941)
T TIGR01517 579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLAR------S 652 (941)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEE------C
Confidence 6889999999999999999999999999999999999999632223443322110000 0000 000000000 0
Q ss_pred CCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecC--CchhhHHHhhCCCceeEEEeeCCChHH
Q 044553 149 PPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK--NFPLWDLIIRNPMLIKAEIHEWTDGEE 226 (275)
Q Consensus 149 ~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~e 226 (275)
....|.++++.+... + ..+.|+|||.||..+-++ +++.++-+ |. +...+.... +..=++|..
T Consensus 653 -sPe~K~~iV~~lq~~----g-~vVam~GDGvNDapALk~---AdVGIAmg~~gt---dvAk~aADi----vL~dd~f~~ 716 (941)
T TIGR01517 653 -SPLDKQLLVLMLKDM----G-EVVAVTGDGTNDAPALKL---ADVGFSMGISGT---EVAKEASDI----ILLDDNFAS 716 (941)
T ss_pred -CHHHHHHHHHHHHHC----C-CEEEEECCCCchHHHHHh---CCcceecCCCcc---HHHHHhCCE----EEecCCHHH
Confidence 112389999998764 2 479999999999987644 56665543 33 323222222 222256777
Q ss_pred HHHHH
Q 044553 227 LEQIL 231 (275)
Q Consensus 227 l~~~l 231 (275)
|...+
T Consensus 717 I~~~i 721 (941)
T TIGR01517 717 IVRAV 721 (941)
T ss_pred HHHHH
Confidence 77666
No 171
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=97.86 E-value=7.4e-05 Score=63.32 Aligned_cols=51 Identities=22% Similarity=0.287 Sum_probs=47.2
Q ss_pred CCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCc
Q 044553 73 HPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGF 123 (275)
Q Consensus 73 ~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~ 123 (275)
.|.+.+.|..|++.|..+++=|.|.++.+...++.+++..+||.|+|....
T Consensus 144 ~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~~~L~~~Fd~ii~~G~~ 194 (297)
T PF05152_consen 144 DPAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKELKLEGYFDIIICGGNK 194 (297)
T ss_pred ChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHhCCccccEEEEeCCcc
Confidence 578889999999999999999999999999999999999999999987654
No 172
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=97.83 E-value=0.00024 Score=60.69 Aligned_cols=56 Identities=11% Similarity=0.049 Sum_probs=44.1
Q ss_pred CchHHHHHHHHHhhhcCCCCeEEEEcCC-CCCcccccccCCCCeEeecCCchhhHHHh
Q 044553 152 MCKGVVIERIQASLSKEGNKKIIYLGDG-SGDYCPSLKLSEGDHVMPRKNFPLWDLII 208 (275)
Q Consensus 152 ~~K~~~l~~~~~~~~~~~~~~~i~vGDs-~~Di~~a~~~~~~~~~~~~~~~~~~~l~~ 208 (275)
++-..+++.++.++++. |++++||||+ .+||.-++.-|...+++-.+.....+...
T Consensus 224 KP~~~m~~~l~~~~~i~-psRt~mvGDRL~TDIlFG~~~G~~TLLvltGv~~led~~~ 280 (306)
T KOG2882|consen 224 KPSTFMFEYLLEKFNID-PSRTCMVGDRLDTDILFGKNCGFKTLLVLSGVTTLEDILE 280 (306)
T ss_pred CCCHHHHHHHHHHcCCC-cceEEEEcccchhhhhHhhccCcceEEEecCcCcHHHHHh
Confidence 33458888889888887 6999999999 67998888878887777777766655553
No 173
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=97.82 E-value=3.5e-05 Score=65.52 Aligned_cols=38 Identities=16% Similarity=0.269 Sum_probs=31.6
Q ss_pred CCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccc
Q 044553 148 CPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPS 186 (275)
Q Consensus 148 ~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a 186 (275)
.|.+.+|..+++.++.+++.. +++++++|||.||+.+-
T Consensus 160 lP~~a~K~~Al~~L~~~~~~~-~~~vl~aGDSgND~~mL 197 (247)
T PF05116_consen 160 LPKGASKGAALRYLMERWGIP-PEQVLVAGDSGNDLEML 197 (247)
T ss_dssp EETT-SHHHHHHHHHHHHT---GGGEEEEESSGGGHHHH
T ss_pred ccCCCCHHHHHHHHHHHhCCC-HHHEEEEeCCCCcHHHH
Confidence 577888999999999999765 47999999999999887
No 174
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=97.80 E-value=7.3e-05 Score=60.99 Aligned_cols=88 Identities=18% Similarity=0.288 Sum_probs=46.7
Q ss_pred eE-EEEEcCCcccCCcc-H-HHHHHHhCCC--hHHHhhcCCCChHHHHHHHHHHHHhCCCCHHHHHH------HHhcCCC
Q 044553 4 IV-VIFDFDKTIIDCDS-D-NFVVDELGAT--DLFNQLLPTMPWNSLMDRMMKELHSQGKTIEDIVE------VLKRIPI 72 (275)
Q Consensus 4 ~~-viFD~DGTL~d~~~-~-~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 72 (275)
++ |.+|+||||+|..+ + ..+-+.++.. ....+......+... ... .....+.+.. ++..++|
T Consensus 2 ~i~I~iDiDgVLad~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~-----g~~--~~e~~~~~~~~~~~~~~f~~l~p 74 (191)
T PF06941_consen 2 KIRIAIDIDGVLADFNSAFIEWFNEEFGKNPELTPEDITGYWDWEKW-----GIT--EPEFYEKLWRFYEEPGFFSNLPP 74 (191)
T ss_dssp -EEEEEESBTTTB-HHHHHHHHHHHHTTTS----GGGGTSSSHHHHH-----HHH--STTHHHHHHHHHTSTTTTTT--B
T ss_pred CcEEEEECCCCCcccHHHHHHHHHHHcCCCCCCCHHHhhhhhHHHHh-----CCC--CHHHHHHHHHHHhChhhhcCCCc
Confidence 45 89999999999864 3 4445556665 222222221111111 000 0111122222 3456899
Q ss_pred CCCHHHHHHHHHHcCCcEEEEeCCCH
Q 044553 73 HPRVVPAIKSAHALGCELRIVSDANL 98 (275)
Q Consensus 73 ~pg~~e~L~~L~~~g~~~~IvS~~~~ 98 (275)
.||+.++|+.|.+.|+.++++|+.+.
T Consensus 75 ~~gA~e~l~~L~~~g~~~~~Itar~~ 100 (191)
T PF06941_consen 75 IPGAVEALKKLRDKGHEIVIITARPP 100 (191)
T ss_dssp -TTHHHHHHHHHTSTTEEEEEEE-SS
T ss_pred cHHHHHHHHHHHHcCCcEEEEEecCc
Confidence 99999999999999988888887654
No 175
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=97.79 E-value=0.00019 Score=71.90 Aligned_cols=143 Identities=13% Similarity=0.088 Sum_probs=87.7
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcc--eEecCCCccCCCCceeecccCCCCCCCCCCCc
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFS--EINTNPGFVDEEGRLRIFPFHDFTKCSHGCNL 147 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd--~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~ 147 (275)
-+|.|+++++++.|++.|+++.++|+.....+..+.+++|+..--. .++++...-... +.++...-..+..
T Consensus 546 Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~-------~~el~~~~~~~~V 618 (917)
T COG0474 546 DPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDALS-------DEELAELVEELSV 618 (917)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcC-------HHHHHHHhhhCcE
Confidence 5789999999999999999999999999999999999999865432 244433211000 0000000000111
Q ss_pred -CC-CCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChH
Q 044553 148 -CP-PNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGE 225 (275)
Q Consensus 148 -~~-~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 225 (275)
|. ...-|.++++.+.+. + .-+.|+|||.||..+-+. +++.++-++.+. +-..+.... +..-+++.
T Consensus 619 fARvsP~qK~~IV~~lq~~----g-~vVamtGDGvNDapALk~---ADVGIamg~~Gt-daak~Aadi----vl~dd~~~ 685 (917)
T COG0474 619 FARVSPEQKARIVEALQKS----G-HVVAMTGDGVNDAPALKA---ADVGIAMGGEGT-DAAKEAADI----VLLDDNFA 685 (917)
T ss_pred EEEcCHHHHHHHHHHHHhC----C-CEEEEeCCCchhHHHHHh---cCccEEecccHH-HHHHhhcce----EeecCcHH
Confidence 11 112289999998875 3 588899999999987744 566654443211 111111111 34557777
Q ss_pred HHHHHHH
Q 044553 226 ELEQILL 232 (275)
Q Consensus 226 el~~~l~ 232 (275)
.+...++
T Consensus 686 ~i~~av~ 692 (917)
T COG0474 686 TIVLAVV 692 (917)
T ss_pred HHHHHHH
Confidence 7766654
No 176
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=97.72 E-value=0.00012 Score=69.68 Aligned_cols=38 Identities=18% Similarity=0.174 Sum_probs=33.7
Q ss_pred CHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcC
Q 044553 75 RVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRD 112 (275)
Q Consensus 75 g~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~ 112 (275)
...+.|+.|+++|++++++|+.+...+..+++.+++..
T Consensus 437 ~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~~ 474 (694)
T PRK14502 437 TALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIKD 474 (694)
T ss_pred HHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCC
Confidence 34578999999999999999999999999999998754
No 177
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=97.72 E-value=0.00027 Score=71.75 Aligned_cols=140 Identities=14% Similarity=0.091 Sum_probs=83.3
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCc----------ceEecCCCccCCCCceeecccCCCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCF----------SEINTNPGFVDEEGRLRIFPFHDFT 139 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~f----------d~i~~~~~~~~~~g~~~~kp~~~~~ 139 (275)
-++.|++.++++.|++.|+++.++|+.....+..+.+.+|+..-. ..++++.....-+ ..++.
T Consensus 645 Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~-------~~~l~ 717 (1053)
T TIGR01523 645 DPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALS-------DEEVD 717 (1053)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhhhcC-------HHHHH
Confidence 368899999999999999999999999999999999999995320 1233222110000 00000
Q ss_pred CCCCCCCc-CC-CCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeec--CCchhhHHHhhCCCcee
Q 044553 140 KCSHGCNL-CP-PNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPR--KNFPLWDLIIRNPMLIK 215 (275)
Q Consensus 140 ~~~~~~~~-~~-~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~--~~~~~~~l~~~~~~~~~ 215 (275)
.....+.. |. ....|.++++.+... + ..+.|+|||.||..+-+. +++.++- .|. +...+....
T Consensus 718 ~~~~~~~V~ar~sP~~K~~iV~~lq~~----g-~~Vam~GDGvNDapaLk~---AdVGIAmg~~gt---~vak~aADi-- 784 (1053)
T TIGR01523 718 DLKALCLVIARCAPQTKVKMIEALHRR----K-AFCAMTGDGVNDSPSLKM---ANVGIAMGINGS---DVAKDASDI-- 784 (1053)
T ss_pred HHhhcCeEEEecCHHHHHHHHHHHHhc----C-CeeEEeCCCcchHHHHHh---CCccEecCCCcc---HHHHHhcCE--
Confidence 00000000 00 113388999988764 2 578899999999987643 5555553 343 222222221
Q ss_pred EEEeeCCChHHHHHHH
Q 044553 216 AEIHEWTDGEELEQIL 231 (275)
Q Consensus 216 ~~~~~~~~~~el~~~l 231 (275)
+..=++|..|...+
T Consensus 785 --vl~dd~f~~I~~~i 798 (1053)
T TIGR01523 785 --VLSDDNFASILNAI 798 (1053)
T ss_pred --EEecCCHHHHHHHH
Confidence 22225577776655
No 178
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=97.70 E-value=7.5e-05 Score=58.96 Aligned_cols=52 Identities=17% Similarity=0.197 Sum_probs=42.0
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCC-cCCcceEecCCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGI-RDCFSEINTNPG 122 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl-~~~fd~i~~~~~ 122 (275)
+.+.||+.++|++|.+. +.++|.|++...++..+++.+.- ..+|+.+++.+.
T Consensus 35 v~~RP~l~~FL~~l~~~-~ev~i~T~~~~~ya~~v~~~ldp~~~~~~~~~~r~~ 87 (159)
T PF03031_consen 35 VKLRPGLDEFLEELSKH-YEVVIWTSASEEYAEPVLDALDPNGKLFSRRLYRDD 87 (159)
T ss_dssp EEE-TTHHHHHHHHHHH-CEEEEE-SS-HHHHHHHHHHHTTTTSSEEEEEEGGG
T ss_pred EeeCchHHHHHHHHHHh-ceEEEEEeehhhhhhHHHHhhhhhcccccccccccc
Confidence 56789999999999766 99999999999999999999987 467888876553
No 179
>PLN02382 probable sucrose-phosphatase
Probab=97.69 E-value=0.00024 Score=64.91 Aligned_cols=49 Identities=16% Similarity=0.123 Sum_probs=38.1
Q ss_pred cCCCCCchHHHHHHHHHhh---hcCCCCeEEEEcCCCCCcccccccCCCCeEe
Q 044553 147 LCPPNMCKGVVIERIQASL---SKEGNKKIIYLGDGSGDYCPSLKLSEGDHVM 196 (275)
Q Consensus 147 ~~~~~~~K~~~l~~~~~~~---~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~ 196 (275)
+.+.+.+|..+++.++..+ ++. +++++++|||.||+.+-..++..++++
T Consensus 169 I~p~g~sKg~Al~~L~~~~~~~gi~-~~~~iafGDs~NDleMl~~ag~~gvam 220 (413)
T PLN02382 169 VLPQGAGKGQALAYLLKKLKAEGKA-PVNTLVCGDSGNDAELFSVPDVYGVMV 220 (413)
T ss_pred EEeCCCCHHHHHHHHHHHhhhcCCC-hhcEEEEeCCHHHHHHHhcCCCCEEEE
Confidence 3577888999999999998 554 589999999999998875544234444
No 180
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=97.68 E-value=0.0011 Score=54.24 Aligned_cols=36 Identities=14% Similarity=0.230 Sum_probs=31.4
Q ss_pred HHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCc
Q 044553 76 VVPAIKSAHALGCELRIVSDANLFFIETILEHLGIR 111 (275)
Q Consensus 76 ~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~ 111 (275)
+.+++.+|++.|++++.+|+.+...+...-+.+|+.
T Consensus 28 A~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 28 AAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred cchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 447888999999999999999998888888888886
No 181
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=97.59 E-value=0.0016 Score=59.96 Aligned_cols=51 Identities=18% Similarity=0.107 Sum_probs=40.5
Q ss_pred HHHHHHHcCCcEEEEeCCCHHHHHHHHHH-cCCcCCcceEecCCCccCCCCceeecc
Q 044553 79 AIKSAHALGCELRIVSDANLFFIETILEH-LGIRDCFSEINTNPGFVDEEGRLRIFP 134 (275)
Q Consensus 79 ~L~~L~~~g~~~~IvS~~~~~~i~~~l~~-~gl~~~fd~i~~~~~~~~~~g~~~~kp 134 (275)
.++..++.| +++|+|..++-+++..++. +|+ |.|++.+..+...|...+.-
T Consensus 101 ~~~~~~~~g-~~vVVTAsPrvmVEpFake~LG~----D~VvGTEL~v~~~G~~TG~~ 152 (498)
T PLN02499 101 AWKVFSSCD-KRVVVTRMPRVMVERFAKEHLRA----DEVIGSELVVNRFGFATGFI 152 (498)
T ss_pred HHHHHHcCC-eEEEEeCCHHHHHHHHHHHhcCC----ceEEeeeEEEeeccEEEEEE
Confidence 666777788 9999999999999999998 786 47778777665447777753
No 182
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=97.54 E-value=0.00022 Score=60.24 Aligned_cols=49 Identities=18% Similarity=0.143 Sum_probs=36.3
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEeCCC---HHHHHHHHHH-cCCcCCcceEecC
Q 044553 72 IHPRVVPAIKSAHALGCELRIVSDAN---LFFIETILEH-LGIRDCFSEINTN 120 (275)
Q Consensus 72 ~~pg~~e~L~~L~~~g~~~~IvS~~~---~~~i~~~l~~-~gl~~~fd~i~~~ 120 (275)
++|++.++|+.++++|+++.++||++ ...+...+.. +|+.--.+.++++
T Consensus 15 ~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~~~~iits 67 (236)
T TIGR01460 15 PIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSPDQIITS 67 (236)
T ss_pred cCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCHHHeeeH
Confidence 37899999999999999999999764 3444445555 7776555666654
No 183
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=97.53 E-value=0.00089 Score=67.89 Aligned_cols=41 Identities=20% Similarity=0.297 Sum_probs=38.8
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCc
Q 044553 71 PIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIR 111 (275)
Q Consensus 71 ~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~ 111 (275)
++.|++.++++.|+++|+++.++|+.....+..+.+.+|+-
T Consensus 568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~ 608 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGII 608 (997)
T ss_pred CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC
Confidence 67899999999999999999999999999999999999984
No 184
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=97.49 E-value=0.00015 Score=64.18 Aligned_cols=57 Identities=9% Similarity=-0.092 Sum_probs=37.7
Q ss_pred CCeEEEEcCCC-CCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHHHHHH
Q 044553 170 NKKIIYLGDGS-GDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQIL 231 (275)
Q Consensus 170 ~~~~i~vGDs~-~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el~~~l 231 (275)
+++++||||+. +||..|.++|+..+.+..+.+...+. .....+ ...++++.|+...|
T Consensus 263 ~~~~~mIGD~~~tDI~ga~~~G~~silV~tG~~~~~~~--~~~~~p---~~vv~~l~e~~~~i 320 (321)
T TIGR01456 263 FHALYMVGDNPASDIIGAQNYGWFSCLVKTGVYNGGDD--LKECKP---TLIVNDVFDAVTKI 320 (321)
T ss_pred hheEEEEcCChhhhhhhHHhCCceEEEecccccCCCCC--CCCCCC---CEEECCHHHHHHHh
Confidence 36999999995 99999999998877775543432221 001112 33678888887654
No 185
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=97.49 E-value=0.0031 Score=51.15 Aligned_cols=75 Identities=11% Similarity=0.110 Sum_probs=47.7
Q ss_pred hHHHHHHHHHhhhcCCCCeEEEEcCCC-CCcccccccCCCCeEeecCCchhhHHHhhCCCceeEEEeeCCChHHHHHHHH
Q 044553 154 KGVVIERIQASLSKEGNKKIIYLGDGS-GDYCPSLKLSEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEELEQILL 232 (275)
Q Consensus 154 K~~~l~~~~~~~~~~~~~~~i~vGDs~-~Di~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~el~~~l~ 232 (275)
....++..+...+.. |++++||||-. .|+..|.+.|+.++.+.++-|...+-. .+. +++ ....++|.|...+|-
T Consensus 183 ~~~fFe~al~~~gv~-p~~aVMIGDD~~dDvgGAq~~GMrgilVkTGK~rpsDe~--k~~-~~p-~~~~d~f~~AVd~I~ 257 (262)
T KOG3040|consen 183 SPFFFESALQALGVD-PEEAVMIGDDLNDDVGGAQACGMRGILVKTGKFRPSDEE--KPP-VPP-DLTADNFADAVDLII 257 (262)
T ss_pred CHHHHHHHHHhcCCC-hHHheEEccccccchhhHhhhcceeEEeeccccCCcccc--cCC-CCc-chhhhhHHHHHHHHH
Confidence 345666777766644 68999999994 588888888998888876655332211 111 112 335577777666654
Q ss_pred H
Q 044553 233 H 233 (275)
Q Consensus 233 ~ 233 (275)
+
T Consensus 258 q 258 (262)
T KOG3040|consen 258 Q 258 (262)
T ss_pred h
Confidence 3
No 186
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=97.40 E-value=0.00021 Score=65.50 Aligned_cols=126 Identities=19% Similarity=0.292 Sum_probs=65.8
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHc-C--------CcCCcceEecCCCc--cCCCCc--eeecccC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHL-G--------IRDCFSEINTNPGF--VDEEGR--LRIFPFH 136 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~-g--------l~~~fd~i~~~~~~--~~~~g~--~~~kp~~ 136 (275)
+..-|.+..+|+.|++.|-++.++||+.-.++..+++.+ | +.++||.|++.... |-.++. ....+..
T Consensus 182 i~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP~FF~~~~pfr~vd~~~ 261 (448)
T PF05761_consen 182 IHKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKPGFFTEGRPFREVDTET 261 (448)
T ss_dssp EE--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CCHHHCT---EEEEETTT
T ss_pred ccCCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCCcccCCCCceEEEECCC
Confidence 345689999999999999999999999999999999974 3 46789988875431 101110 0000000
Q ss_pred C---CCCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCC-CCCccccc-ccCCCCeEeec
Q 044553 137 D---FTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDG-SGDYCPSL-KLSEGDHVMPR 198 (275)
Q Consensus 137 ~---~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs-~~Di~~a~-~~~~~~~~~~~ 198 (275)
. ......... +......--+..+..-.+..+ .+++||||+ ..||..++ ..||..++++.
T Consensus 262 g~l~~~~~~~~l~--~g~vY~gGn~~~l~~ll~~~g-~~VLY~GDhi~~Di~~~k~~~gWrT~~Ii~ 325 (448)
T PF05761_consen 262 GKLKWGKYVGPLE--KGKVYSGGNWDQLHKLLGWRG-KEVLYFGDHIYGDILKSKKRHGWRTAAIIP 325 (448)
T ss_dssp SSEECS---SS----TC-EEEE--HHHHHHHCT--G-GGEEEEESSTTTTHHHHHHHH-SEEEEE-T
T ss_pred Ccccccccccccc--CCCEeecCCHHHHHHHHccCC-CeEEEECCchhhhhhhhccccceEEEEEeh
Confidence 0 000000000 001111122233333334444 699999999 68995554 44887777764
No 187
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=97.13 E-value=0.00098 Score=55.47 Aligned_cols=40 Identities=23% Similarity=0.279 Sum_probs=33.4
Q ss_pred CCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccC
Q 044553 150 PNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLS 190 (275)
Q Consensus 150 ~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~ 190 (275)
.+..|...++.++..+++. ++++++|||+.||+.+...+|
T Consensus 176 ~~~~Kg~al~~l~~~lgi~-~~~vi~~GD~~NDi~ml~~ag 215 (221)
T TIGR02463 176 ASSSKGKAANWLKATYNQP-DVKTLGLGDGPNDLPLLEVAD 215 (221)
T ss_pred CCCCHHHHHHHHHHHhCCC-CCcEEEECCCHHHHHHHHhCC
Confidence 3455999999999998876 589999999999999885544
No 188
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=97.12 E-value=0.0014 Score=66.99 Aligned_cols=42 Identities=17% Similarity=0.238 Sum_probs=39.6
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCc
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIR 111 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~ 111 (275)
-++.|++.++++.|++.|+++.++|+.....+..+.+..|+-
T Consensus 655 d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii 696 (1054)
T TIGR01657 655 NPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIV 696 (1054)
T ss_pred cCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC
Confidence 368999999999999999999999999999999999999984
No 189
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=96.99 E-value=0.0022 Score=55.29 Aligned_cols=38 Identities=18% Similarity=0.205 Sum_probs=32.3
Q ss_pred chHHHHHHHHHhhhcCCC-CeEEEEcCCCCCcccccccCC
Q 044553 153 CKGVVIERIQASLSKEGN-KKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 153 ~K~~~l~~~~~~~~~~~~-~~~i~vGDs~~Di~~a~~~~~ 191 (275)
.|...++++++.++.. + +++++|||+.||+.++..+|.
T Consensus 190 ~Kg~al~~l~~~~~i~-~~~~v~~~GDs~NDi~m~~~ag~ 228 (273)
T PRK00192 190 DKGKAVRWLKELYRRQ-DGVETIALGDSPNDLPMLEAADI 228 (273)
T ss_pred CHHHHHHHHHHHHhcc-CCceEEEEcCChhhHHHHHhCCe
Confidence 5899999999888765 6 899999999999999865443
No 190
>PLN02423 phosphomannomutase
Probab=96.89 E-value=0.0036 Score=53.13 Aligned_cols=34 Identities=18% Similarity=0.295 Sum_probs=24.8
Q ss_pred CCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHH
Q 044553 73 HPRVVPAIKSAHALGCELRIVSDANLFFIETILEH 107 (275)
Q Consensus 73 ~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~ 107 (275)
.|.+.++|++|+++ ++++++|+.....+...+..
T Consensus 26 ~~~~~~ai~~l~~~-i~fviaTGR~~~~~~~~~~~ 59 (245)
T PLN02423 26 TPEMLEFMKELRKV-VTVGVVGGSDLSKISEQLGK 59 (245)
T ss_pred CHHHHHHHHHHHhC-CEEEEECCcCHHHHHHHhcc
Confidence 35666889999976 99999999866555544443
No 191
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=96.89 E-value=0.0013 Score=55.31 Aligned_cols=41 Identities=20% Similarity=0.215 Sum_probs=34.8
Q ss_pred CCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCccccccc
Q 044553 148 CPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKL 189 (275)
Q Consensus 148 ~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~ 189 (275)
.+.+.+|..+++.++..++.. +++++++||+.||+.+...+
T Consensus 154 ~~~~~~K~~al~~l~~~~g~~-~~~~i~~GD~~nD~~ml~~~ 194 (236)
T TIGR02471 154 LPLRASKGLALRYLSYRWGLP-LEQILVAGDSGNDEEMLRGL 194 (236)
T ss_pred eeCCCChHHHHHHHHHHhCCC-HHHEEEEcCCccHHHHHcCC
Confidence 467788999999999998765 47999999999999988553
No 192
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=96.78 E-value=0.0028 Score=51.72 Aligned_cols=41 Identities=22% Similarity=0.300 Sum_probs=36.7
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCc
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIR 111 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~ 111 (275)
....|++.+||+.+.+ .|.++|-|+++..++..++..+++.
T Consensus 44 ~~kRP~l~eFL~~~~~-~feIvVwTAa~~~ya~~~l~~l~~~ 84 (195)
T TIGR02245 44 ELMRPYLHEFLTSAYE-DYDIVIWSATSMKWIEIKMTELGVL 84 (195)
T ss_pred EEeCCCHHHHHHHHHh-CCEEEEEecCCHHHHHHHHHHhccc
Confidence 3457999999999998 5999999999999999999998764
No 193
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=96.72 E-value=0.0044 Score=58.20 Aligned_cols=79 Identities=24% Similarity=0.383 Sum_probs=63.5
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCP 149 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~ 149 (275)
-++.|++.+++++|++.|+++.++|+.....+..+.+.+|+ ++ ...|
T Consensus 346 d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi-------~~-----------~~~p--------------- 392 (499)
T TIGR01494 346 DPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI-------FA-----------RVTP--------------- 392 (499)
T ss_pred CCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc-------ee-----------ccCH---------------
Confidence 47899999999999999999999999999999999999986 11 1122
Q ss_pred CCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccc
Q 044553 150 PNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLK 188 (275)
Q Consensus 150 ~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~ 188 (275)
..|.+.++.+..+ + ..+.|+||+.||..+-..
T Consensus 393 --~~K~~~v~~l~~~----g-~~v~~vGDg~nD~~al~~ 424 (499)
T TIGR01494 393 --EEKAALVEALQKK----G-RVVAMTGDGVNDAPALKK 424 (499)
T ss_pred --HHHHHHHHHHHHC----C-CEEEEECCChhhHHHHHh
Confidence 1278888887643 2 589999999999976643
No 194
>PLN03017 trehalose-phosphatase
Probab=96.61 E-value=0.0047 Score=55.13 Aligned_cols=77 Identities=25% Similarity=0.220 Sum_probs=47.9
Q ss_pred CCchHHHHHHHHHhhhcCC--CCeEEEEcCCCCCcccccccCC--CCeEeecCCchhhHHHhhCCCceeEEEeeCCChHH
Q 044553 151 NMCKGVVIERIQASLSKEG--NKKIIYLGDGSGDYCPSLKLSE--GDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEE 226 (275)
Q Consensus 151 ~~~K~~~l~~~~~~~~~~~--~~~~i~vGDs~~Di~~a~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~e 226 (275)
+..|+.+++.++..++..+ ....+|+||-.+|-.+-+.+.. .++.+.-+.. +....| .+..++..|
T Consensus 281 ~~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~---------~k~T~A-~y~L~dp~e 350 (366)
T PLN03017 281 EWDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKF---------PKDTDA-SYSLQDPSE 350 (366)
T ss_pred CCCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCC---------CCCCcc-eEeCCCHHH
Confidence 6689999999998765322 1358999999998755433321 1222211100 111223 346799999
Q ss_pred HHHHHHHHHHH
Q 044553 227 LEQILLHLVNT 237 (275)
Q Consensus 227 l~~~l~~~~~~ 237 (275)
+..+|+.+..-
T Consensus 351 V~~fL~~L~~~ 361 (366)
T PLN03017 351 VMDFLARLVEW 361 (366)
T ss_pred HHHHHHHHHHH
Confidence 99999988753
No 195
>PLN02151 trehalose-phosphatase
Probab=96.55 E-value=0.0046 Score=54.98 Aligned_cols=76 Identities=21% Similarity=0.150 Sum_probs=46.7
Q ss_pred CCchHHHHHHHHHhhhcCCC--CeEEEEcCCCCCcccccccCC--CCeEeecCCchhhHHHhhCCCceeEEEeeCCChHH
Q 044553 151 NMCKGVVIERIQASLSKEGN--KKIIYLGDGSGDYCPSLKLSE--GDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDGEE 226 (275)
Q Consensus 151 ~~~K~~~l~~~~~~~~~~~~--~~~i~vGDs~~Di~~a~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~e 226 (275)
+..|..+++.++..++..+. .-.+|+||-.+|-.+-..+.. .++.+.-+. .+....| ....++..+
T Consensus 267 ~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg~---------~~k~T~A-~y~L~dp~e 336 (354)
T PLN02151 267 KWDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVSK---------YAKETNA-SYSLQEPDE 336 (354)
T ss_pred CCCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEecc---------CCCCCcc-eEeCCCHHH
Confidence 66899999999987653321 247999999888754432221 122211110 0111123 346899999
Q ss_pred HHHHHHHHHH
Q 044553 227 LEQILLHLVN 236 (275)
Q Consensus 227 l~~~l~~~~~ 236 (275)
+.++|+.+..
T Consensus 337 V~~~L~~L~~ 346 (354)
T PLN02151 337 VMEFLERLVE 346 (354)
T ss_pred HHHHHHHHHH
Confidence 9999998875
No 196
>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=96.35 E-value=0.042 Score=42.44 Aligned_cols=45 Identities=11% Similarity=0.013 Sum_probs=32.5
Q ss_pred hHHHHHHHHHhhhcCCCCeEEEEcCC-CCCcccccccCCCCeEeec
Q 044553 154 KGVVIERIQASLSKEGNKKIIYLGDG-SGDYCPSLKLSEGDHVMPR 198 (275)
Q Consensus 154 K~~~l~~~~~~~~~~~~~~~i~vGDs-~~Di~~a~~~~~~~~~~~~ 198 (275)
-.+.++++-..-....+++++||||. .+||.+|..+|.-+++.-+
T Consensus 123 t~E~~~y~~~Nshv~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~ 168 (190)
T KOG2961|consen 123 TAEEVEYHFGNSHVCTSSELIMVGDRLFTDIVYANRMGSLGVWTEP 168 (190)
T ss_pred cHHHHHHHhCCcccCChhHeEEEccchhhhHhhhhhccceeEEecc
Confidence 45777776553333446899999999 6899999887776666543
No 197
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=96.33 E-value=0.0098 Score=54.64 Aligned_cols=149 Identities=17% Similarity=0.223 Sum_probs=94.2
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCC
Q 044553 71 PIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPP 150 (275)
Q Consensus 71 ~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~ 150 (275)
.+-||++|-+++|++.|++.+.+|+.+.-.+..+.+..|+++| +. ..+|
T Consensus 447 ivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVDdf---iA------------eatP---------------- 495 (681)
T COG2216 447 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDF---IA------------EATP---------------- 495 (681)
T ss_pred hcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCchhh---hh------------cCCh----------------
Confidence 4679999999999999999999999999999999999999765 22 1233
Q ss_pred CCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeec-CCchhhHHHhhCCCceeEEEeeC-CChHHHH
Q 044553 151 NMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPR-KNFPLWDLIIRNPMLIKAEIHEW-TDGEELE 228 (275)
Q Consensus 151 ~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~-~~~~el~ 228 (275)
..|.+.+++...+ + .-+-|.||+.||-.+..+ +++.++- .|.... .+..+.. .. +++.-|.
T Consensus 496 -EdK~~~I~~eQ~~----g-rlVAMtGDGTNDAPALAq---AdVg~AMNsGTqAA---kEAaNMV-----DLDS~PTKli 558 (681)
T COG2216 496 -EDKLALIRQEQAE----G-RLVAMTGDGTNDAPALAQ---ADVGVAMNSGTQAA---KEAANMV-----DLDSNPTKLI 558 (681)
T ss_pred -HHHHHHHHHHHhc----C-cEEEEcCCCCCcchhhhh---cchhhhhccccHHH---HHhhccc-----ccCCCcccee
Confidence 1277877776654 3 467899999999866533 5555553 233211 1212222 22 4455555
Q ss_pred HHHHHHHHHhccCCCCCcccccCcccc----cccccchhhcccCcc
Q 044553 229 QILLHLVNTIGSTNNNNSAQLLSADCK----LQTISAAAHETLPQV 270 (275)
Q Consensus 229 ~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 270 (275)
+++. +...+-+| |.+..-.|+-|. |--|||..-...||.
T Consensus 559 evV~-IGKqlLiT--RGaLTTFSIANDvAKYFaIiPA~F~~~~P~l 601 (681)
T COG2216 559 EVVE-IGKQLLIT--RGALTTFSIANDVAKYFAIIPAMFAAAYPQL 601 (681)
T ss_pred hHhh-hhhhheee--cccceeeehhhHHHHHHHHHHHHHHhhcccc
Confidence 5443 11122221 222333555553 666888877777764
No 198
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=96.32 E-value=0.028 Score=48.62 Aligned_cols=48 Identities=10% Similarity=0.100 Sum_probs=36.6
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEeCCC---HHHHHHHHHHcCCcCCcceEec
Q 044553 72 IHPRVVPAIKSAHALGCELRIVSDAN---LFFIETILEHLGIRDCFSEINT 119 (275)
Q Consensus 72 ~~pg~~e~L~~L~~~g~~~~IvS~~~---~~~i~~~l~~~gl~~~fd~i~~ 119 (275)
++||+.++|+.|+++|++++++||++ .......++++|+..-.+.|++
T Consensus 19 ~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~~~i~t 69 (279)
T TIGR01452 19 VVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLAEQLFS 69 (279)
T ss_pred eCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEec
Confidence 58999999999999999999999965 3344456777888644445553
No 199
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=96.32 E-value=0.016 Score=59.35 Aligned_cols=42 Identities=10% Similarity=0.029 Sum_probs=38.7
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCc
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIR 111 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~ 111 (275)
-++.||+.++++.|++.|+++.++|+.....+..+....|+-
T Consensus 630 D~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii 671 (1057)
T TIGR01652 630 DKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLL 671 (1057)
T ss_pred hhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCC
Confidence 468899999999999999999999999999999999888874
No 200
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=96.31 E-value=0.0057 Score=54.12 Aligned_cols=15 Identities=20% Similarity=0.322 Sum_probs=13.5
Q ss_pred EEEEEcCCcccCCcc
Q 044553 5 VVIFDFDKTIIDCDS 19 (275)
Q Consensus 5 ~viFD~DGTL~d~~~ 19 (275)
+++||+||||+++..
T Consensus 2 ~~ifD~DGvL~~g~~ 16 (321)
T TIGR01456 2 GFAFDIDGVLFRGKK 16 (321)
T ss_pred EEEEeCcCceECCcc
Confidence 689999999999965
No 201
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=96.16 E-value=0.011 Score=58.91 Aligned_cols=75 Identities=17% Similarity=0.197 Sum_probs=48.2
Q ss_pred CCCCchHHHHHHHHHhh---hcCCCCeEEEEcCCCCCcccccccCC--CC---------eEeecCCchhhHHHhhCCCce
Q 044553 149 PPNMCKGVVIERIQASL---SKEGNKKIIYLGDGSGDYCPSLKLSE--GD---------HVMPRKNFPLWDLIIRNPMLI 214 (275)
Q Consensus 149 ~~~~~K~~~l~~~~~~~---~~~~~~~~i~vGDs~~Di~~a~~~~~--~~---------~~~~~~~~~~~~l~~~~~~~~ 214 (275)
+.+..|+.+++.++... +.. ++.++++||..||..+-..++. .+ +.+ +-|. ..-
T Consensus 758 p~gvnKG~Al~~Ll~~~~~~g~~-~d~vl~~GDD~nDedMF~~~~~~~~g~~~~~~~~~~~v-~VG~----------~~S 825 (854)
T PLN02205 758 PQGVSKGLVAKRLLSIMQERGML-PDFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFAC-TVGQ----------KPS 825 (854)
T ss_pred eCCCCHHHHHHHHHHHHHhcCCC-cccEEEEcCCccHHHHHHHhhhhccCCcccccccceeE-EECC----------CCc
Confidence 56788999999998543 332 5799999999999966544331 11 111 1111 111
Q ss_pred eEEEeeCCChHHHHHHHHHHHH
Q 044553 215 KAEIHEWTDGEELEQILLHLVN 236 (275)
Q Consensus 215 ~~~~~~~~~~~el~~~l~~~~~ 236 (275)
.| ....++..|+.++|+.+..
T Consensus 826 ~A-~y~L~d~~eV~~lL~~L~~ 846 (854)
T PLN02205 826 KA-KYYLDDTAEIVRLMQGLAS 846 (854)
T ss_pred cC-eEecCCHHHHHHHHHHHHh
Confidence 23 2357999999999987763
No 202
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=96.15 E-value=0.021 Score=48.85 Aligned_cols=42 Identities=17% Similarity=0.175 Sum_probs=33.0
Q ss_pred cCCCCCCHHHHHHHHHHc-CCcEEEEeCCCHHHHHHHHHHcCC
Q 044553 69 RIPIHPRVVPAIKSAHAL-GCELRIVSDANLFFIETILEHLGI 110 (275)
Q Consensus 69 ~~~~~pg~~e~L~~L~~~-g~~~~IvS~~~~~~i~~~l~~~gl 110 (275)
...+.+++.++|+.|.++ +.-++|+|+.+...++..+.-.++
T Consensus 38 ~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i 80 (266)
T COG1877 38 AAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGI 80 (266)
T ss_pred ccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCc
Confidence 366788999999999987 345999999999888877763333
No 203
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=96.13 E-value=0.0091 Score=50.62 Aligned_cols=71 Identities=18% Similarity=0.098 Sum_probs=48.2
Q ss_pred CchHHHHHHHHHhhhcCCCCeEEEEcCCCCCccccccc-------CCCCeEeecCCchhhHHHhhCCCceeEEEeeCCCh
Q 044553 152 MCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKL-------SEGDHVMPRKNFPLWDLIIRNPMLIKAEIHEWTDG 224 (275)
Q Consensus 152 ~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~-------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 224 (275)
..|...++.++..++.. +..++|+||+.+|+.+...+ +...+.+. .+. ....+ ....+++
T Consensus 166 ~~Kg~a~~~~~~~~~~~-~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~-~g~----------~~~~A-~~~~~~~ 232 (244)
T TIGR00685 166 VNKGEIVKRLLWHQPGS-GISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG-SGS----------KKTVA-KFHLTGP 232 (244)
T ss_pred CCHHHHHHHHHHhcccC-CCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe-cCC----------cCCCc-eEeCCCH
Confidence 45999999999988765 37899999999999887655 21122221 110 11123 3367899
Q ss_pred HHHHHHHHHHH
Q 044553 225 EELEQILLHLV 235 (275)
Q Consensus 225 ~el~~~l~~~~ 235 (275)
.++.++|+.+.
T Consensus 233 ~~v~~~L~~l~ 243 (244)
T TIGR00685 233 QQVLEFLGLLV 243 (244)
T ss_pred HHHHHHHHHHh
Confidence 99999987664
No 204
>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]
Probab=96.00 E-value=0.041 Score=51.90 Aligned_cols=133 Identities=17% Similarity=0.160 Sum_probs=78.5
Q ss_pred ceEEEEEcCCcccCCccHHHHHHHhCCChHHHhhcCCCChHHHHHHHHHHHHhCCCCHHHHHHHHhcCCCCCCHHHHHHH
Q 044553 3 GIVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTIEDIVEVLKRIPIHPRVVPAIKS 82 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~ 82 (275)
-++||-|+||||+.++.+=.++-.+|.+ | -+.|+..+...
T Consensus 530 ~kIVISDIDGTITKSDvLGh~lp~iGkD-----------W-----------------------------Th~GVAkLyt~ 569 (738)
T KOG2116|consen 530 DKIVISDIDGTITKSDVLGHVLPMIGKD-----------W-----------------------------THTGVAKLYTK 569 (738)
T ss_pred CcEEEecCCCceEhhhhhhhhhhhhcCc-----------c-----------------------------hhhhHHHHHHH
Confidence 3789999999999998644443333321 1 14677788888
Q ss_pred HHHcCCcEEEEeCC---CHHHHHHHHHHcCCcCC--cc--eEecCCCccCCC--CceeecccCCCCCCCCCCCcCCCCCc
Q 044553 83 AHALGCELRIVSDA---NLFFIETILEHLGIRDC--FS--EINTNPGFVDEE--GRLRIFPFHDFTKCSHGCNLCPPNMC 153 (275)
Q Consensus 83 L~~~g~~~~IvS~~---~~~~i~~~l~~~gl~~~--fd--~i~~~~~~~~~~--g~~~~kp~~~~~~~~~~~~~~~~~~~ 153 (275)
.+++||++.-+|+. .....+..|..+.-+.. -+ .|++-+..+.+= ..+..||. .-
T Consensus 570 Ik~NGYk~lyLSARaIgQA~~TR~yL~nv~QdG~~LPdGPViLSPd~lf~Al~REVI~RkPe----------------~F 633 (738)
T KOG2116|consen 570 IKENGYKILYLSARAIGQADSTRQYLKNVEQDGKKLPDGPVILSPDSLFAALHREVIERKPE----------------VF 633 (738)
T ss_pred HHhCCeeEEEEehhhhhhhHHHHHHHHHHhhcCccCCCCCEEeCCCcchHHHHHHHHHcCch----------------hh
Confidence 89999999999975 34445555554432221 11 233322222110 01122332 33
Q ss_pred hHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCC
Q 044553 154 KGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 154 K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
|-.+|+.+..-+......-..-+|...+|.-.-+++|.
T Consensus 634 KIAcL~DIk~LF~p~~nPFYAgFGNR~TDviSY~~VgV 671 (738)
T KOG2116|consen 634 KIACLTDIKNLFPPSGNPFYAGFGNRITDVISYRQVGV 671 (738)
T ss_pred hHHHHHHHHHhcCCCCCceeeecCCCcccceeeeeecC
Confidence 78888888876652221245568999999976666555
No 205
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=95.96 E-value=0.01 Score=50.29 Aligned_cols=32 Identities=13% Similarity=0.162 Sum_probs=24.2
Q ss_pred CCCCCCHHHHHHHHHHc-CCcEEEEeCCCHHHH
Q 044553 70 IPIHPRVVPAIKSAHAL-GCELRIVSDANLFFI 101 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~-g~~~~IvS~~~~~~i 101 (275)
..+.|++.+.|+.|.+. +..++|+|+.+...+
T Consensus 24 ~~~~~~~~~~L~~L~~~~~~~v~ivSGR~~~~~ 56 (244)
T TIGR00685 24 AVVSDRLLTILQKLAARPHNAIWIISGRKFLEK 56 (244)
T ss_pred cCCCHHHHHHHHHHHhCCCCeEEEEECCChhhc
Confidence 45678888999999776 567889999864433
No 206
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=95.95 E-value=0.015 Score=50.08 Aligned_cols=48 Identities=19% Similarity=0.094 Sum_probs=38.6
Q ss_pred CCCCCchHHHHHHHHHhhhc---CCCCeEEEEcCCCCCcccccccCCCCeEeecC
Q 044553 148 CPPNMCKGVVIERIQASLSK---EGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK 199 (275)
Q Consensus 148 ~~~~~~K~~~l~~~~~~~~~---~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~ 199 (275)
.+.+..|..+++.++..+++ . ++++++||||.||+.|-.. +++.++-+
T Consensus 182 ~~~g~sKg~al~~l~~~lgi~~~~-~~~viafGDs~NDi~Ml~~---ag~gvAM~ 232 (271)
T PRK03669 182 LDASAGKDQAANWLIATYQQLSGT-RPTTLGLGDGPNDAPLLDV---MDYAVVVK 232 (271)
T ss_pred ecCCCCHHHHHHHHHHHHHhhcCC-CceEEEEcCCHHHHHHHHh---CCEEEEec
Confidence 56778899999999999987 5 4899999999999998854 44454444
No 207
>PLN03190 aminophospholipid translocase; Provisional
Probab=95.90 E-value=0.028 Score=57.99 Aligned_cols=41 Identities=15% Similarity=0.072 Sum_probs=37.0
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGI 110 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl 110 (275)
-++.+|+.++++.|++.|+++.++|+.....+..+....|+
T Consensus 725 D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~L 765 (1178)
T PLN03190 725 DKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKL 765 (1178)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCC
Confidence 47899999999999999999999999988888888877766
No 208
>KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=95.87 E-value=0.013 Score=51.28 Aligned_cols=120 Identities=14% Similarity=0.207 Sum_probs=68.2
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHc---CCcCCcceEecCCCccCCCCcee--ecccCCCCCCCCCCC
Q 044553 72 IHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHL---GIRDCFSEINTNPGFVDEEGRLR--IFPFHDFTKCSHGCN 146 (275)
Q Consensus 72 ~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~---gl~~~fd~i~~~~~~~~~~g~~~--~kp~~~~~~~~~~~~ 146 (275)
--|....+|+.|+++|-++.++||++-.++..-++.+ .+.++||.|+.-.... ..+. .+|..-+.+.....-
T Consensus 241 r~~ql~~fl~kL~~~GKklFLiTNSPysFVd~GM~flvG~~WRdlFDVVIvqA~KP---~Fftde~rPfR~~dek~~sl~ 317 (510)
T KOG2470|consen 241 RNPQLLAFLRKLKDHGKKLFLITNSPYSFVDKGMRFLVGDDWRDLFDVVIVQANKP---EFFTDERRPFRKYDEKRGSLL 317 (510)
T ss_pred ccHHHHHHHHHHHHhcCcEEEEeCCchhhhhcCceeeeCccHHhhhheeEEecCCC---cccccccCcchhhcccccchh
Confidence 3467788999999999999999999999988777754 3557789776422100 0000 112111111100000
Q ss_pred c---C---CCCCchHHHHHHHHHhhhcCCCCeEEEEcCC-CCCcccc-cccCCCCeE
Q 044553 147 L---C---PPNMCKGVVIERIQASLSKEGNKKIIYLGDG-SGDYCPS-LKLSEGDHV 195 (275)
Q Consensus 147 ~---~---~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs-~~Di~~a-~~~~~~~~~ 195 (275)
+ - +..-.+...+..+++--+..++ +++|+||. .+|+.-. ...||..-+
T Consensus 318 wdkv~klekgkiYy~G~l~~flelt~WrG~-~VlYFGDHlySDLad~tlkhgWRTgA 373 (510)
T KOG2470|consen 318 WDKVDKLEKGKIYYQGNLKSFLELTGWRGP-RVLYFGDHLYSDLADLTLKHGWRTGA 373 (510)
T ss_pred hhhhhhcccCceeeeccHHHHHHHhccCCC-eeEEecCcchhhhhhhHhhccccccc
Confidence 0 0 0111122345556655556664 99999999 6788433 245664433
No 209
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=95.84 E-value=0.0056 Score=52.51 Aligned_cols=43 Identities=14% Similarity=0.196 Sum_probs=36.0
Q ss_pred CCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCC
Q 044553 148 CPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 148 ~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
.+.+..|..+++.++..+++. ++++++|||+.||+.+...+|.
T Consensus 191 ~~~gvsKg~al~~l~~~~gi~-~~~v~afGD~~NDi~Ml~~ag~ 233 (270)
T PRK10513 191 LDKRVNKGTGVKSLAEHLGIK-PEEVMAIGDQENDIAMIEYAGV 233 (270)
T ss_pred eCCCCChHHHHHHHHHHhCCC-HHHEEEECCchhhHHHHHhCCc
Confidence 355677999999999999876 4899999999999999865443
No 210
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=95.82 E-value=0.12 Score=50.53 Aligned_cols=141 Identities=15% Similarity=0.115 Sum_probs=85.8
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcc-eEecCCCccCC-CCceeecccCC--CCCCCCCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFS-EINTNPGFVDE-EGRLRIFPFHD--FTKCSHGC 145 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd-~i~~~~~~~~~-~g~~~~kp~~~--~~~~~~~~ 145 (275)
-+.+||+++.++.+++.|+.+-.||+..-..++.+....|+-.--+ .+.--...|.. ......+-.|. ....
T Consensus 646 DPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eFr~~s~ee~~~i~pkl~VlAR---- 721 (1034)
T KOG0204|consen 646 DPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEFRELSQEERDKIWPKLRVLAR---- 721 (1034)
T ss_pred CCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhhhhcCHHHHHhhhhhheeeec----
Confidence 3688999999999999999999999999999999999999743211 11111111110 00000111111 0011
Q ss_pred CcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecC--CchhhHHHhhCCCceeEEEeeCCC
Q 044553 146 NLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRK--NFPLWDLIIRNPMLIKAEIHEWTD 223 (275)
Q Consensus 146 ~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~ 223 (275)
.....|...++.+... .+-+.+-||+.||-.+. +.+|+.++-+ |. +-..+.... +..=++
T Consensus 722 ---SSP~DK~lLVk~L~~~-----g~VVAVTGDGTNDaPAL---keADVGlAMGIaGT---eVAKEaSDI----Ii~DDN 783 (1034)
T KOG0204|consen 722 ---SSPNDKHLLVKGLIKQ-----GEVVAVTGDGTNDAPAL---KEADVGLAMGIAGT---EVAKEASDI----IILDDN 783 (1034)
T ss_pred ---CCCchHHHHHHHHHhc-----CcEEEEecCCCCCchhh---hhcccchhccccch---hhhhhhCCe----EEEcCc
Confidence 1234588888888743 24556789999998766 4467777643 33 333333322 234478
Q ss_pred hHHHHHHHH
Q 044553 224 GEELEQILL 232 (275)
Q Consensus 224 ~~el~~~l~ 232 (275)
|+.+...++
T Consensus 784 FssIVk~v~ 792 (1034)
T KOG0204|consen 784 FSSIVKAVK 792 (1034)
T ss_pred hHHHHHHHH
Confidence 888877665
No 211
>PRK10976 putative hydrolase; Provisional
Probab=95.72 E-value=0.0057 Score=52.36 Aligned_cols=50 Identities=22% Similarity=0.256 Sum_probs=40.0
Q ss_pred CcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEee
Q 044553 146 NLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMP 197 (275)
Q Consensus 146 ~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~ 197 (275)
++.+.+..|...++.++..+++. ++++++|||+.||+.+-..+|. +++..
T Consensus 183 eI~~~gvsKg~al~~l~~~lgi~-~~~viafGD~~NDi~Ml~~ag~-~vAm~ 232 (266)
T PRK10976 183 EVMAGGVSKGHALEAVAKKLGYS-LKDCIAFGDGMNDAEMLSMAGK-GCIMG 232 (266)
T ss_pred EEEcCCCChHHHHHHHHHHcCCC-HHHeEEEcCCcccHHHHHHcCC-Ceeec
Confidence 44567788999999999999876 4899999999999998866554 34433
No 212
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=95.72 E-value=0.0077 Score=50.68 Aligned_cols=33 Identities=6% Similarity=0.091 Sum_probs=22.6
Q ss_pred HHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCc
Q 044553 78 PAIKSAHALGCELRIVSDANLFFIETILEHLGIR 111 (275)
Q Consensus 78 e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~ 111 (275)
+.++ ++++|++++++|+.+...+..+++.+++.
T Consensus 22 ~~~~-~~~~gi~~viaTGR~~~~v~~~~~~l~l~ 54 (236)
T TIGR02471 22 ELLR-GSGDAVGFGIATGRSVESAKSRYAKLNLP 54 (236)
T ss_pred HHHH-hcCCCceEEEEeCCCHHHHHHHHHhCCCC
Confidence 3444 35667777777777777777777777664
No 213
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=95.50 E-value=0.019 Score=49.12 Aligned_cols=49 Identities=20% Similarity=0.192 Sum_probs=39.3
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEeCCCHH---HHHHHHHHcCCcCCcceEecC
Q 044553 72 IHPRVVPAIKSAHALGCELRIVSDANLF---FIETILEHLGIRDCFSEINTN 120 (275)
Q Consensus 72 ~~pg~~e~L~~L~~~g~~~~IvS~~~~~---~i~~~l~~~gl~~~fd~i~~~ 120 (275)
+.|++.++|+.|+++|++++++||++.. .+...++.+|++--.+.|+++
T Consensus 22 ~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~~~~~i~ts 73 (257)
T TIGR01458 22 AVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDISEDEVFTP 73 (257)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCCCHHHeEcH
Confidence 6899999999999999999999996544 466777888986444566654
No 214
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=95.41 E-value=0.0068 Score=52.12 Aligned_cols=45 Identities=16% Similarity=0.175 Sum_probs=37.6
Q ss_pred CcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCC
Q 044553 146 NLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 146 ~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
++.+.+..|...++.++..+++. ++++++|||+.||+.|-..+|.
T Consensus 181 eI~~~g~sKg~al~~l~~~~gi~-~~~v~afGD~~NDi~Ml~~ag~ 225 (272)
T PRK15126 181 EVLPVGCNKGAALAVLSQHLGLS-LADCMAFGDAMNDREMLGSVGR 225 (272)
T ss_pred EeecCCCChHHHHHHHHHHhCCC-HHHeEEecCCHHHHHHHHHcCC
Confidence 34567788999999999999886 4899999999999998865443
No 215
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=95.36 E-value=0.21 Score=43.46 Aligned_cols=32 Identities=19% Similarity=0.213 Sum_probs=27.3
Q ss_pred cCCCCCCHHHHHHHHHHcC-CcEEEEeCCCHHH
Q 044553 69 RIPIHPRVVPAIKSAHALG-CELRIVSDANLFF 100 (275)
Q Consensus 69 ~~~~~pg~~e~L~~L~~~g-~~~~IvS~~~~~~ 100 (275)
.-.++||+..+.+.|.+.| .++.-+||++-..
T Consensus 194 tr~~ipGV~~~yr~l~~~~~apvfYvSnSPw~~ 226 (373)
T COG4850 194 TRQVIPGVSAWYRALTNLGDAPVFYVSNSPWQL 226 (373)
T ss_pred ccCCCCCHHHHHHHHHhcCCCCeEEecCChhHh
Confidence 4568999999999999987 8999999987543
No 216
>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]
Probab=95.33 E-value=0.15 Score=38.87 Aligned_cols=30 Identities=17% Similarity=0.377 Sum_probs=26.8
Q ss_pred HHhcCCCCCCHHHHHHHHHHcCCcEEEEeCC
Q 044553 66 VLKRIPIHPRVVPAIKSAHALGCELRIVSDA 96 (275)
Q Consensus 66 ~~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~ 96 (275)
+++.+.+.|++.+++++|-+. |.++|+|..
T Consensus 63 fFRnL~V~p~aq~v~keLt~~-y~vYivtaa 92 (180)
T COG4502 63 FFRNLGVQPFAQTVLKELTSI-YNVYIVTAA 92 (180)
T ss_pred hhhhcCccccHHHHHHHHHhh-heEEEEEec
Confidence 567788999999999999987 999999986
No 217
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=95.03 E-value=0.012 Score=50.04 Aligned_cols=45 Identities=18% Similarity=0.273 Sum_probs=37.6
Q ss_pred CcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCC
Q 044553 146 NLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 146 ~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
++.+.+..|...++.++..++.. ++++++|||+.||+.+...++.
T Consensus 181 eI~~~~~~K~~~i~~~~~~~~~~-~~~~~~~GD~~nD~~m~~~~~~ 225 (256)
T TIGR00099 181 EITAKGVSKGSALQSLAEALGIS-LEDVIAFGDGMNDIEMLEAAGY 225 (256)
T ss_pred EecCCCCChHHHHHHHHHHcCCC-HHHEEEeCCcHHhHHHHHhCCc
Confidence 34567788999999999988765 4899999999999999866554
No 218
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=94.98 E-value=0.019 Score=48.46 Aligned_cols=45 Identities=9% Similarity=0.053 Sum_probs=35.0
Q ss_pred CCchHHHHHHHHHhhhcCCCCeE-EEEcCCC-CCcccccccCCCCeEe
Q 044553 151 NMCKGVVIERIQASLSKEGNKKI-IYLGDGS-GDYCPSLKLSEGDHVM 196 (275)
Q Consensus 151 ~~~K~~~l~~~~~~~~~~~~~~~-i~vGDs~-~Di~~a~~~~~~~~~~ 196 (275)
++++...++.++.+++..+ +++ +||||+. +||.+|+++|+..+++
T Consensus 187 ~KP~~~~~~~~~~~~~~~~-~~~~~~IGD~~~~Di~~A~~~G~~~i~v 233 (236)
T TIGR01460 187 GKPSPAIYRAALNLLQARP-ERRDVMVGDNLRTDILGAKNAGFDTLLV 233 (236)
T ss_pred cCCCHHHHHHHHHHhCCCC-ccceEEECCCcHHHHHHHHHCCCcEEEE
Confidence 3556788888888876554 455 9999997 8999999988876654
No 219
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=94.78 E-value=0.058 Score=53.59 Aligned_cols=40 Identities=10% Similarity=0.214 Sum_probs=33.2
Q ss_pred CCCCCCHHHHHHHHHHc-CCcEEEEeCCCHHHHHHHHHHcC
Q 044553 70 IPIHPRVVPAIKSAHAL-GCELRIVSDANLFFIETILEHLG 109 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~-g~~~~IvS~~~~~~i~~~l~~~g 109 (275)
..+.|++.++|+.|.+. +-.++|+|+.....++..+...+
T Consensus 531 a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~ 571 (797)
T PLN03063 531 LGLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGEYN 571 (797)
T ss_pred CCCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCCCC
Confidence 55678899999999876 67899999999999998887543
No 220
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=94.52 E-value=0.076 Score=53.20 Aligned_cols=40 Identities=8% Similarity=0.258 Sum_probs=33.7
Q ss_pred CCCCCCHHHHHHHHHHc-CCcEEEEeCCCHHHHHHHHHHcC
Q 044553 70 IPIHPRVVPAIKSAHAL-GCELRIVSDANLFFIETILEHLG 109 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~-g~~~~IvS~~~~~~i~~~l~~~g 109 (275)
..+.|++.++|+.|.+. +..++|+|+.....++..+...+
T Consensus 621 a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~~ 661 (934)
T PLN03064 621 LRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEFD 661 (934)
T ss_pred cCCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCCC
Confidence 45778899999999875 67899999999999998887644
No 221
>PLN02887 hydrolase family protein
Probab=94.43 E-value=0.023 Score=54.12 Aligned_cols=46 Identities=24% Similarity=0.329 Sum_probs=38.4
Q ss_pred CCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCC
Q 044553 145 CNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 145 ~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
.++.+.+..|...++.++..+++. ++++++|||+.||+.|-..+|.
T Consensus 499 lEI~p~gvSKG~ALk~L~e~lGI~-~eeviAFGDs~NDIeMLe~AG~ 544 (580)
T PLN02887 499 LEIVPPGTSKGNGVKMLLNHLGVS-PDEIMAIGDGENDIEMLQLASL 544 (580)
T ss_pred EEEecCCCCHHHHHHHHHHHcCCC-HHHEEEEecchhhHHHHHHCCC
Confidence 344677888999999999999876 4899999999999999865443
No 222
>KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism]
Probab=94.36 E-value=0.14 Score=42.41 Aligned_cols=100 Identities=16% Similarity=0.186 Sum_probs=68.7
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcC---Cc----CCcceEecCCCccCCCCceeecccCCCCCCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLG---IR----DCFSEINTNPGFVDEEGRLRIFPFHDFTKCS 142 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~g---l~----~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~ 142 (275)
...|+++.+.++..+..|++++|-|+++....+.+..+.+ +. .|||.-++.-.
T Consensus 122 ~~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllfg~s~~gdl~~y~~gyfDt~iG~K~-------------------- 181 (254)
T KOG2630|consen 122 AHVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLFGYSDAGDLRKYISGYFDTTIGLKV-------------------- 181 (254)
T ss_pred ccccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHHcccCcchHHHHhhhhhhcccccee--------------------
Confidence 4789999999999999999999999999887777666532 11 23333222111
Q ss_pred CCCCcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEeecCCc
Q 044553 143 HGCNLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMPRKNF 201 (275)
Q Consensus 143 ~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~~~~~ 201 (275)
-...........+.. +.++++.-|-..-..+|+.+|.......|.|.
T Consensus 182 -----------e~~sy~~I~~~Ig~s-~~eiLfLTd~~~Ea~aa~~aGl~a~l~~rPgn 228 (254)
T KOG2630|consen 182 -----------ESQSYKKIGHLIGKS-PREILFLTDVPREAAAARKAGLQAGLVSRPGN 228 (254)
T ss_pred -----------hhHHHHHHHHHhCCC-hhheEEeccChHHHHHHHhcccceeeeecCCC
Confidence 123344444444444 47999999988888888887876666667655
No 223
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=94.19 E-value=0.23 Score=45.59 Aligned_cols=85 Identities=15% Similarity=0.141 Sum_probs=59.2
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCC
Q 044553 72 IHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPN 151 (275)
Q Consensus 72 ~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~ 151 (275)
+|.....++..|+++|+-++|+|-....-++.++++.. +.|+.-++.. .+.+.|
T Consensus 256 ~fk~fQ~~Ik~l~kqGVlLav~SKN~~~da~evF~khp-----~MiLkeedfa-----------------~~~iNW---- 309 (574)
T COG3882 256 AFKTFQNFIKGLKKQGVLLAVCSKNTEKDAKEVFRKHP-----DMILKEEDFA-----------------VFQINW---- 309 (574)
T ss_pred hHHHHHHHHHHHHhccEEEEEecCCchhhHHHHHhhCC-----CeEeeHhhhh-----------------hheecC----
Confidence 34455688999999999999999888888888887642 3454332211 011111
Q ss_pred CchHHHHHHHHHhhhcCCCCeEEEEcCCCCCc
Q 044553 152 MCKGVVIERIQASLSKEGNKKIIYLGDGSGDY 183 (275)
Q Consensus 152 ~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di 183 (275)
.+|.+-+.....+++.. .+.++|+.|++...
T Consensus 310 ~~K~eNirkIAkklNlg-~dSmvFiDD~p~Er 340 (574)
T COG3882 310 DPKAENIRKIAKKLNLG-LDSMVFIDDNPAER 340 (574)
T ss_pred CcchhhHHHHHHHhCCC-ccceEEecCCHHHH
Confidence 23789999999988764 47899999986544
No 224
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=94.15 E-value=0.18 Score=40.92 Aligned_cols=44 Identities=16% Similarity=0.273 Sum_probs=27.9
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCC--cCCcceEec
Q 044553 72 IHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGI--RDCFSEINT 119 (275)
Q Consensus 72 ~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl--~~~fd~i~~ 119 (275)
..|.+.++|+.|++. +.+.+|-++.-. ...+++|- -..||.+++
T Consensus 29 ~~~e~~~~l~~lr~~-v~ig~VggsDl~---k~~eqlG~~Vl~~fDY~F~ 74 (252)
T KOG3189|consen 29 VTPEMLEFLQKLRKK-VTIGFVGGSDLS---KQQEQLGDNVLEEFDYVFS 74 (252)
T ss_pred CCHHHHHHHHHHhhh-eEEEEeecHHHH---HHHHHhchhHHhhhccccc
Confidence 467788899998876 778888765433 34455553 244666653
No 225
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=94.09 E-value=0.26 Score=42.86 Aligned_cols=28 Identities=7% Similarity=0.046 Sum_probs=24.2
Q ss_pred CCCCCHHHHHHHHHHc----CCcEEEEeCCCH
Q 044553 71 PIHPRVVPAIKSAHAL----GCELRIVSDANL 98 (275)
Q Consensus 71 ~~~pg~~e~L~~L~~~----g~~~~IvS~~~~ 98 (275)
.+.|++.++|+.|.++ .++++++||+..
T Consensus 51 ~~i~~~~~Alr~L~~~~g~lkIP~vfLTNGGg 82 (389)
T KOG1618|consen 51 RPIPGALKALRRLVDNQGQLKIPFVFLTNGGG 82 (389)
T ss_pred CCCcchHHHHHHHHhcCCCeeccEEEEeCCCC
Confidence 4679999999999988 799999999854
No 226
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=94.05 E-value=0.057 Score=45.40 Aligned_cols=36 Identities=19% Similarity=0.133 Sum_probs=22.0
Q ss_pred cCCCCCCHHHHHHHHHHc-CCcEEEEeCCCHHHHHHH
Q 044553 69 RIPIHPRVVPAIKSAHAL-GCELRIVSDANLFFIETI 104 (275)
Q Consensus 69 ~~~~~pg~~e~L~~L~~~-g~~~~IvS~~~~~~i~~~ 104 (275)
...+.|++.++|+.|.+. +..++|+|+.+....+..
T Consensus 17 ~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~ 53 (235)
T PF02358_consen 17 AAVPPPELRELLRALAADPNNTVAIVSGRSLDDLERF 53 (235)
T ss_dssp G----HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH
T ss_pred ccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHh
Confidence 456778899999999877 346999999987774433
No 227
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=93.72 E-value=0.61 Score=39.77 Aligned_cols=70 Identities=23% Similarity=0.336 Sum_probs=56.5
Q ss_pred CCceEEEEEcCCcccCCccHHHHHHHhCCChHHHhhcCCCChHHHHHHHHHHHHhCCCCHHHHHHHHhcCCCCCCHHHHH
Q 044553 1 MSGIVVIFDFDKTIIDCDSDNFVVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTIEDIVEVLKRIPIHPRVVPAI 80 (275)
Q Consensus 1 m~~~~viFD~DGTL~d~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L 80 (275)
|++|+|+||+||||++.+. .+.|...+.|
T Consensus 1 M~~kli~~DlDGTLl~~~~---------------------------------------------------~i~~~~~~ai 29 (272)
T PRK10530 1 MTYRVIALDLDGTLLTPKK---------------------------------------------------TILPESLEAL 29 (272)
T ss_pred CCccEEEEeCCCceECCCC---------------------------------------------------ccCHHHHHHH
Confidence 7789999999999987631 2346677999
Q ss_pred HHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCc
Q 044553 81 KSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGF 123 (275)
Q Consensus 81 ~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~ 123 (275)
++|+++|++++++|+.+...+...++.+++..+ .|.+|...
T Consensus 30 ~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~--~I~~NGa~ 70 (272)
T PRK10530 30 ARAREAGYKVIIVTGRHHVAIHPFYQALALDTP--AICCNGTY 70 (272)
T ss_pred HHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCC--EEEcCCcE
Confidence 999999999999999999999999999988643 45555443
No 228
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=93.24 E-value=0.066 Score=44.82 Aligned_cols=41 Identities=22% Similarity=0.218 Sum_probs=32.4
Q ss_pred CCchHHHHHHHHHhhhcC-CCCeEEEEcCCCCCcccccccCC
Q 044553 151 NMCKGVVIERIQASLSKE-GNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 151 ~~~K~~~l~~~~~~~~~~-~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
+..|..+++.++..++.. .+++++++||+.||+.+...++.
T Consensus 179 ~~sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~ag~ 220 (225)
T TIGR02461 179 GSDKGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMFEVVDL 220 (225)
T ss_pred CCCHHHHHHHHHHHhccccCcccEEEEcCCHHHHHHHHhCCC
Confidence 566999999998887542 24689999999999988865554
No 229
>PTZ00174 phosphomannomutase; Provisional
Probab=92.74 E-value=0.13 Score=43.63 Aligned_cols=44 Identities=23% Similarity=0.328 Sum_probs=34.7
Q ss_pred CCCCchHHHHHHHHHhhhcCCCCeEEEEcC----CCCCcccccccCCCCeEee
Q 044553 149 PPNMCKGVVIERIQASLSKEGNKKIIYLGD----GSGDYCPSLKLSEGDHVMP 197 (275)
Q Consensus 149 ~~~~~K~~~l~~~~~~~~~~~~~~~i~vGD----s~~Di~~a~~~~~~~~~~~ 197 (275)
+.+..|...++.++.. +++++++|| +.||+.+-..++.+++.++
T Consensus 184 ~~gvsKg~al~~L~~~-----~~eviafGD~~~~~~NDieMl~~~~~~g~~v~ 231 (247)
T PTZ00174 184 PKGWDKTYCLRHLEND-----FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK 231 (247)
T ss_pred eCCCcHHHHHHHHHhh-----hhhEEEEcccCCCCCCcHhhhhcCCCceEEeC
Confidence 4566799999999987 379999999 8999998865555555554
No 230
>PLN02423 phosphomannomutase
Probab=92.56 E-value=0.24 Score=42.03 Aligned_cols=34 Identities=21% Similarity=0.268 Sum_probs=28.6
Q ss_pred CCCCCchHHHHHHHHHhhhcCCCCeEEEEcC----CCCCccccc
Q 044553 148 CPPNMCKGVVIERIQASLSKEGNKKIIYLGD----GSGDYCPSL 187 (275)
Q Consensus 148 ~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGD----s~~Di~~a~ 187 (275)
-+.+..|..+++.++ ++++++++|| +.||+.+-.
T Consensus 184 ~~~gvnKg~al~~L~------~~~e~~aFGD~~~~~~ND~eMl~ 221 (245)
T PLN02423 184 FPQGWDKTYCLQFLE------DFDEIHFFGDKTYEGGNDHEIFE 221 (245)
T ss_pred eeCCCCHHHHHHHhc------CcCeEEEEeccCCCCCCcHHHHh
Confidence 356778999999999 2689999999 799998873
No 231
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=89.91 E-value=2.3 Score=43.74 Aligned_cols=41 Identities=10% Similarity=0.012 Sum_probs=33.5
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGI 110 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl 110 (275)
-++-+|++|.|+.|++.|+++.++|+.-.+.+-.+.-..++
T Consensus 650 DkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~L 690 (1151)
T KOG0206|consen 650 DKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRL 690 (1151)
T ss_pred chhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcC
Confidence 46789999999999999999999999876666665555443
No 232
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=89.54 E-value=0.42 Score=41.50 Aligned_cols=44 Identities=9% Similarity=0.081 Sum_probs=32.5
Q ss_pred CCchHHHHHHHHHhhhcC-CCCeEEEEcCCCCCcccccccCCCCeEee
Q 044553 151 NMCKGVVIERIQASLSKE-GNKKIIYLGDGSGDYCPSLKLSEGDHVMP 197 (275)
Q Consensus 151 ~~~K~~~l~~~~~~~~~~-~~~~~i~vGDs~~Di~~a~~~~~~~~~~~ 197 (275)
+.+|..+++.+...|... .+-.++.+|||+||+.+-.. +++.+.
T Consensus 206 ~~dKg~A~~~L~~~y~~~~~~~~tiaLGDspND~~mLe~---~D~~vv 250 (302)
T PRK12702 206 SLPGEQAVQLLLDCYQRHLGPIKALGIGCSPPDLAFLRW---SEQKVV 250 (302)
T ss_pred CCCHHHHHHHHHHHHHhccCCceEEEecCChhhHHHHHh---CCeeEE
Confidence 456999999999887643 22389999999999988744 454443
No 233
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=88.57 E-value=1.5 Score=43.18 Aligned_cols=42 Identities=17% Similarity=0.294 Sum_probs=37.4
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCc
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIR 111 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~ 111 (275)
.++.|+.+.+|+.|++.+++++.+|+.+.-.+-.+.+.+|+.
T Consensus 674 CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv 715 (1160)
T KOG0209|consen 674 CPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIV 715 (1160)
T ss_pred CCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeee
Confidence 478899999999999999999999998887888888888874
No 234
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=87.99 E-value=0.84 Score=38.73 Aligned_cols=15 Identities=27% Similarity=0.381 Sum_probs=13.0
Q ss_pred EEEEEcCCcccCCcc
Q 044553 5 VVIFDFDKTIIDCDS 19 (275)
Q Consensus 5 ~viFD~DGTL~d~~~ 19 (275)
-|.||.|++|.+.++
T Consensus 123 RIAFDgDaVLfsDes 137 (264)
T PF06189_consen 123 RIAFDGDAVLFSDES 137 (264)
T ss_pred EEEEcCCeEeecCcc
Confidence 489999999998866
No 235
>TIGR01658 EYA-cons_domain eyes absent protein conserved domain. This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.
Probab=87.69 E-value=1.3 Score=37.22 Aligned_cols=39 Identities=13% Similarity=0.146 Sum_probs=31.2
Q ss_pred chHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCC
Q 044553 153 CKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEG 192 (275)
Q Consensus 153 ~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~ 192 (275)
+|...++++..+++... -.-++|||+..--.+|+.+++.
T Consensus 214 GK~~cFe~I~~Rfg~p~-~~f~~IGDG~eEe~aAk~l~wP 252 (274)
T TIGR01658 214 GKLQCFKWIKERFGHPK-VRFCAIGDGWEECTAAQAMNWP 252 (274)
T ss_pred chHHHHHHHHHHhCCCC-ceEEEeCCChhHHHHHHhcCCC
Confidence 48899999999987643 4788999998877888776663
No 236
>KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=87.51 E-value=2.4 Score=40.79 Aligned_cols=52 Identities=17% Similarity=0.238 Sum_probs=44.5
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCc-CCc-ceEecCCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIR-DCF-SEINTNPG 122 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~-~~f-d~i~~~~~ 122 (275)
+++.|++.+||+++.+. |.++|.|-+.+.++..+++-+.-. .|| |.|+|.+.
T Consensus 200 vKlRP~~~efL~~~skl-femhVyTmg~R~YA~~i~~liDP~~~lF~dRIisrde 253 (635)
T KOG0323|consen 200 VKLRPFVHEFLKEANKL-FEMHVYTMGTRDYALEIAKLIDPEGKYFGDRIISRDE 253 (635)
T ss_pred EEeCccHHHHHHHHHhh-ceeEEEeccchHHHHHHHHHhCCCCccccceEEEecC
Confidence 67899999999999976 999999999999999999987655 466 57887664
No 237
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=86.98 E-value=0.46 Score=43.07 Aligned_cols=39 Identities=8% Similarity=-0.004 Sum_probs=24.8
Q ss_pred CchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCC
Q 044553 152 MCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 152 ~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
.-|...++.++..+....| -..-+|...+|..+-..+|.
T Consensus 477 ~FKiayLndl~slf~e~~P-FyAGFGNriTDvisY~~vgI 515 (580)
T COG5083 477 VFKIAYLNDLKSLFIEFDP-FYAGFGNRITDVISYSNVGI 515 (580)
T ss_pred HHHHHHHHHHHHhhCcCCh-hhccccccchhheeeccccC
Confidence 3477888888776643222 22348888999977655554
No 238
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=85.70 E-value=0.43 Score=42.64 Aligned_cols=27 Identities=22% Similarity=0.277 Sum_probs=20.9
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDA 96 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~ 96 (275)
..++|.+..=|..|.+.||.++|.||.
T Consensus 103 ~~l~~~vp~Klktl~~~g~~l~iftnq 129 (422)
T KOG2134|consen 103 RILFPEVPSKLKTLYQDGIKLFIFTNQ 129 (422)
T ss_pred eeeccccchhhhhhccCCeEEEEEecc
Confidence 345677778888888888888888875
No 239
>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=85.31 E-value=0.19 Score=42.81 Aligned_cols=48 Identities=17% Similarity=0.216 Sum_probs=38.3
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCC-cCCcceEe
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGI-RDCFSEIN 118 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl-~~~fd~i~ 118 (275)
+.-+|++.++|...-+. +.+++.|++...++.+++..+.- ...+.+-+
T Consensus 130 V~kRP~vdeFL~~~s~~-~e~v~FTAs~~~Ya~~v~D~LD~~~~i~~~Rl 178 (262)
T KOG1605|consen 130 VRKRPHVDEFLSRVSKW-YELVLFTASLEVYADPLLDILDPDRKIISHRL 178 (262)
T ss_pred EEcCCCHHHHHHHhHHH-HHHHHHHhhhHHHHHHHHHHccCCCCeeeeee
Confidence 45679999999998876 99999999999999999998864 33444333
No 240
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=85.11 E-value=0.71 Score=44.70 Aligned_cols=40 Identities=20% Similarity=0.207 Sum_probs=32.0
Q ss_pred CCchHHHHHHHHHhhhcCCCCeEEEE--cCCCCCcccccccCC
Q 044553 151 NMCKGVVIERIQASLSKEGNKKIIYL--GDGSGDYCPSLKLSE 191 (275)
Q Consensus 151 ~~~K~~~l~~~~~~~~~~~~~~~i~v--GDs~~Di~~a~~~~~ 191 (275)
+.+|..+++.++..+++.. ++++.+ |||.||+.+-..++.
T Consensus 611 gvdKG~AL~~L~e~~gI~~-~eViafalGDs~NDisMLe~Ag~ 652 (694)
T PRK14502 611 GNDKGKAIKILNELFRLNF-GNIHTFGLGDSENDYSMLETVDS 652 (694)
T ss_pred CCCHHHHHHHHHHHhCCCc-cceEEEEcCCcHhhHHHHHhCCc
Confidence 4569999999999887653 677777 999999988855444
No 241
>COG0731 Fe-S oxidoreductases [Energy production and conversion]
Probab=84.24 E-value=1.9 Score=37.50 Aligned_cols=38 Identities=21% Similarity=0.269 Sum_probs=32.1
Q ss_pred cCCCCCCHHHHHHHHHHcC-CcEEEEeCCCHHHHHHHHHHcC
Q 044553 69 RIPIHPRVVPAIKSAHALG-CELRIVSDANLFFIETILEHLG 109 (275)
Q Consensus 69 ~~~~~pg~~e~L~~L~~~g-~~~~IvS~~~~~~i~~~l~~~g 109 (275)
+..++|...++++.+++.| .+++||||++.. .+++.+.
T Consensus 90 EPTLy~~L~elI~~~k~~g~~~tflvTNgslp---dv~~~L~ 128 (296)
T COG0731 90 EPTLYPNLGELIEEIKKRGKKTTFLVTNGSLP---DVLEELK 128 (296)
T ss_pred CcccccCHHHHHHHHHhcCCceEEEEeCCChH---HHHHHhc
Confidence 5789999999999999999 799999999884 4445544
No 242
>COG5663 Uncharacterized conserved protein [Function unknown]
Probab=84.05 E-value=2.8 Score=33.21 Aligned_cols=38 Identities=11% Similarity=0.021 Sum_probs=26.5
Q ss_pred hcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHH
Q 044553 68 KRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILE 106 (275)
Q Consensus 68 ~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~ 106 (275)
++..+..++...|..++++ .+++-+|+.-....+....
T Consensus 69 ke~l~~q~v~~~L~~~~e~-~~L~~itar~~dl~~iT~~ 106 (194)
T COG5663 69 KEALLAQLVKQVLPSLKEE-HRLIYITARKADLTRITYA 106 (194)
T ss_pred HHHHHHHHHHHHhHHHHhh-ceeeeeehhhHHHHHHHHH
Confidence 3455667888999999887 6788888876555444333
No 243
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=83.20 E-value=2.6 Score=31.68 Aligned_cols=44 Identities=14% Similarity=0.113 Sum_probs=36.5
Q ss_pred hcCCCCCCHHHHHHHHHHcCCcEEEEeCCC-HHHHHHHHHHcCCc
Q 044553 68 KRIPIHPRVVPAIKSAHALGCELRIVSDAN-LFFIETILEHLGIR 111 (275)
Q Consensus 68 ~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~-~~~i~~~l~~~gl~ 111 (275)
..+..|++++..|..|+++|+.++++|++. .+.+...|+.+.+.
T Consensus 41 ~e~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~q~L~~fkvk 85 (144)
T KOG4549|consen 41 EEMIFYDDIRRILVDLKKLGVTLIHASRTMAPQIASQGLETFKVK 85 (144)
T ss_pred ceeeeccchhHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHhccC
Confidence 457889999999999999999999999974 45677777776653
No 244
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=82.35 E-value=4.1 Score=41.66 Aligned_cols=64 Identities=17% Similarity=0.331 Sum_probs=43.1
Q ss_pred HHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchHHHHHHHHHhhhcCCCCeE-EEE
Q 044553 98 LFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIERIQASLSKEGNKKI-IYL 176 (275)
Q Consensus 98 ~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~-i~v 176 (275)
...++..|+..|+... .|++.... .+..- |....|..+|+++..++++.. +++ +++
T Consensus 923 v~elr~~Lr~~gLr~~--~iys~~~~-----~LDVl---------------P~~ASKgqAlRyL~~rwgi~l-~~v~Vfa 979 (1050)
T TIGR02468 923 VKELRKLLRIQGLRCH--AVYCRNGT-----RLNVI---------------PLLASRSQALRYLFVRWGIEL-ANMAVFV 979 (1050)
T ss_pred HHHHHHHHHhCCCceE--EEeecCCc-----Eeeee---------------eCCCCHHHHHHHHHHHcCCCh-HHeEEEe
Confidence 4577788888888643 45554311 11222 234559999999999998764 677 569
Q ss_pred cCCCC-Ccc
Q 044553 177 GDGSG-DYC 184 (275)
Q Consensus 177 GDs~~-Di~ 184 (275)
|||-+ |+.
T Consensus 980 GdSGntD~e 988 (1050)
T TIGR02468 980 GESGDTDYE 988 (1050)
T ss_pred ccCCCCCHH
Confidence 99988 964
No 245
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=81.09 E-value=3.1 Score=41.86 Aligned_cols=37 Identities=8% Similarity=0.026 Sum_probs=31.0
Q ss_pred CCCCCHHHHHHHH-HHcCCcEEEEeCCCHHHHHHHHHH
Q 044553 71 PIHPRVVPAIKSA-HALGCELRIVSDANLFFIETILEH 107 (275)
Q Consensus 71 ~~~pg~~e~L~~L-~~~g~~~~IvS~~~~~~i~~~l~~ 107 (275)
.+.|++.++|+.| ++.|..++|+|+.....++..+..
T Consensus 616 ~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~ 653 (854)
T PLN02205 616 SPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSP 653 (854)
T ss_pred CCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCC
Confidence 4557888999998 666899999999999988888864
No 246
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=81.08 E-value=2.8 Score=36.31 Aligned_cols=42 Identities=19% Similarity=0.213 Sum_probs=33.4
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHH---HHcCCc
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETIL---EHLGIR 111 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l---~~~gl~ 111 (275)
-.+.||+.+++..|++.|-.+.++||++...-+..+ +++|+.
T Consensus 37 ~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~ 81 (306)
T KOG2882|consen 37 EKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFN 81 (306)
T ss_pred CCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCcc
Confidence 456899999999999999999999998765554444 456765
No 247
>COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=80.56 E-value=10 Score=35.00 Aligned_cols=98 Identities=18% Similarity=0.184 Sum_probs=66.9
Q ss_pred CCCCC--CHHHHHHHHHHcCCcEEEEeCC--CHHHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCC
Q 044553 70 IPIHP--RVVPAIKSAHALGCELRIVSDA--NLFFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGC 145 (275)
Q Consensus 70 ~~~~p--g~~e~L~~L~~~g~~~~IvS~~--~~~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~ 145 (275)
..++| ...++.+.+.++|-+++++|+- +...++..|...|.+-+--.++.+.. ++.+-+
T Consensus 96 evLypn~~~~eL~e~ai~n~krVIlISDMYlps~Il~~~L~s~g~d~~nipiY~S~e-------~rl~Kn---------- 158 (635)
T COG5610 96 EVLYPNKKNIELVEEAIKNEKRVILISDMYLPSSILRTFLNSFGPDFNNIPIYMSSE-------FRLKKN---------- 158 (635)
T ss_pred eEeeccccchHHHHHHHhCCCeEEEEecccCcHHHHHHHHHhcCCCccCceeeecce-------eehhcc----------
Confidence 44454 4678999999999999999984 67788999999887643223443221 122211
Q ss_pred CcCCCCCchHHHHHHHHHhhhcCCCCeEEEEcCC-CCCcccccccCCCC
Q 044553 146 NLCPPNMCKGVVIERIQASLSKEGNKKIIYLGDG-SGDYCPSLKLSEGD 193 (275)
Q Consensus 146 ~~~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs-~~Di~~a~~~~~~~ 193 (275)
-...++..+..-+.+ +...+.+||. ..|+..++.+|.+.
T Consensus 159 --------Sg~LFk~Vlk~EnVd-~~~w~H~GDN~~aD~l~pk~LgI~T 198 (635)
T COG5610 159 --------SGNLFKAVLKLENVD-PKKWIHCGDNWVADYLKPKNLGIST 198 (635)
T ss_pred --------cchHHHHHHhhcCCC-hhheEEecCchhhhhcCccccchhH
Confidence 125666666655555 4789999999 57998888877654
No 248
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=79.49 E-value=8.1 Score=37.58 Aligned_cols=96 Identities=13% Similarity=0.098 Sum_probs=56.6
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHH--cCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCc
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEH--LGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNL 147 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~--~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~ 147 (275)
+.-..++..-|..|+..+.-..|+++.+..+.-..++. ..+......++++... |
T Consensus 710 v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRct----------P------------- 766 (1051)
T KOG0210|consen 710 VTSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCT----------P------------- 766 (1051)
T ss_pred cCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecC----------h-------------
Confidence 34556788888888888777777777665554444432 1111112234443321 1
Q ss_pred CCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCCCCeEee
Q 044553 148 CPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSEGDHVMP 197 (275)
Q Consensus 148 ~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~~~~~~~ 197 (275)
. -|+.+.+.+.+.- ...+.+||||.||+.+-..+. .++.+.
T Consensus 767 ---t-QKA~v~~llq~~t----~krvc~IGDGGNDVsMIq~A~-~GiGI~ 807 (1051)
T KOG0210|consen 767 ---T-QKAQVVRLLQKKT----GKRVCAIGDGGNDVSMIQAAD-VGIGIV 807 (1051)
T ss_pred ---h-HHHHHHHHHHHhh----CceEEEEcCCCccchheeecc-cceeee
Confidence 0 1677777666543 258899999999998775433 344443
No 249
>PRK13762 tRNA-modifying enzyme; Provisional
Probab=73.67 E-value=5.9 Score=35.06 Aligned_cols=37 Identities=22% Similarity=0.276 Sum_probs=30.2
Q ss_pred cCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHc
Q 044553 69 RIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHL 108 (275)
Q Consensus 69 ~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~ 108 (275)
+..++|.+.++++.++++|+.+.|+|||... ..++.+
T Consensus 140 EPlL~p~l~eli~~~k~~Gi~~~L~TNG~~~---e~l~~L 176 (322)
T PRK13762 140 EPTLYPYLPELIEEFHKRGFTTFLVTNGTRP---DVLEKL 176 (322)
T ss_pred cccchhhHHHHHHHHHHcCCCEEEECCCCCH---HHHHHH
Confidence 4667899999999999999999999999653 344444
No 250
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=73.48 E-value=9.1 Score=36.98 Aligned_cols=108 Identities=18% Similarity=0.252 Sum_probs=63.6
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCC-cc--eEecCCCccCCCCceeecccCCCCCCCCCCCc
Q 044553 71 PIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDC-FS--EINTNPGFVDEEGRLRIFPFHDFTKCSHGCNL 147 (275)
Q Consensus 71 ~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~-fd--~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~ 147 (275)
+|+...-+.+++....|..+-++|+......+..-+++|+.-- +. ...+.. .++...+.|--++-+...+...
T Consensus 492 pprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~----~~~~~~~~~v~elie~adgfAg 567 (942)
T KOG0205|consen 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLG----KDGSMPGSPVDELIEKADGFAG 567 (942)
T ss_pred CCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCC----CCCCCCCCcHHHHhhhccCccc
Confidence 4567788899999999999999999888888888888876422 11 112211 0111111111111111111000
Q ss_pred CCCCCchHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccc
Q 044553 148 CPPNMCKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLK 188 (275)
Q Consensus 148 ~~~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~ 188 (275)
..+ .-|.++++.+..+ .--|-|.||+.||-.+.+.
T Consensus 568 Vfp-ehKy~iV~~Lq~r-----~hi~gmtgdgvndapaLKk 602 (942)
T KOG0205|consen 568 VFP-EHKYEIVKILQER-----KHIVGMTGDGVNDAPALKK 602 (942)
T ss_pred cCH-HHHHHHHHHHhhc-----CceecccCCCcccchhhcc
Confidence 000 1188999988865 2468899999999866543
No 251
>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=73.14 E-value=12 Score=33.87 Aligned_cols=121 Identities=14% Similarity=0.106 Sum_probs=68.2
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHH-c--CCcCCcceEecCCC--ccCCCCce-------eecccCCCC
Q 044553 72 IHPRVVPAIKSAHALGCELRIVSDANLFFIETILEH-L--GIRDCFSEINTNPG--FVDEEGRL-------RIFPFHDFT 139 (275)
Q Consensus 72 ~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~-~--gl~~~fd~i~~~~~--~~~~~g~~-------~~kp~~~~~ 139 (275)
..+....+|..+++.|-++.++||+.-.+....+.. + ++..+||.++.... .+-..|.. .+++.+-
T Consensus 199 ~d~~~v~~l~~~r~sGKk~fl~Tns~~~ytd~~mt~~~~~dW~~yfd~v~~~a~Kp~ff~e~~vlreV~t~~g~l~~g-- 276 (424)
T KOG2469|consen 199 YDGTIVPLLSMLRDSGKKTFLHTNSDWDYTDIFMAFHYGFDWETYFDLVETRAAKPGFFHEGTVLREVEPQEGLLKNG-- 276 (424)
T ss_pred ecCccccchHHHHhhccceEEeeccccchhhHHHHHHhCCCcceeEEEEEEeccCCccccccceeeeecccccccccc--
Confidence 334455599999999999999999987777777765 3 46678886665321 11011100 0111110
Q ss_pred CCCCCCCcCC-CCCchHHHHHHHHHhhhcCCCCeEEEEcCC-CCCcccc-cccCCCCeEeec
Q 044553 140 KCSHGCNLCP-PNMCKGVVIERIQASLSKEGNKKIIYLGDG-SGDYCPS-LKLSEGDHVMPR 198 (275)
Q Consensus 140 ~~~~~~~~~~-~~~~K~~~l~~~~~~~~~~~~~~~i~vGDs-~~Di~~a-~~~~~~~~~~~~ 198 (275)
....+...|. -+.+....++..+... + .+++|+||. ..|+... +..++..+.++.
T Consensus 277 ~~~~p~e~~~~ySggs~~~~~~~l~~~---g-~diLy~gdHi~~dvl~skk~~~wrt~lv~p 334 (424)
T KOG2469|consen 277 DNTGPLEQGGVYSGGSLKTVETSMKVK---G-KDILYGGDHIWGDVLVSKKRRGWRTVLVAP 334 (424)
T ss_pred ccCCcchhcccCCcchHHHHHHHhccc---c-cceeecccceeeeEEecceecceEEEEEeh
Confidence 0011122221 2234556666666553 2 689999999 5688443 455666555553
No 252
>PLN03017 trehalose-phosphatase
Probab=71.47 E-value=17 Score=32.72 Aligned_cols=33 Identities=9% Similarity=0.018 Sum_probs=18.9
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHH
Q 044553 71 PIHPRVVPAIKSAHALGCELRIVSDANLFFIETI 104 (275)
Q Consensus 71 ~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~ 104 (275)
.+.|++.+.|+.|. ++++++|+|+.....+..+
T Consensus 133 ~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~ 165 (366)
T PLN03017 133 FMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNF 165 (366)
T ss_pred cCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHh
Confidence 34455556666666 4566666666665555544
No 253
>PLN02151 trehalose-phosphatase
Probab=69.21 E-value=15 Score=33.02 Aligned_cols=34 Identities=9% Similarity=0.039 Sum_probs=20.6
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHH
Q 044553 71 PIHPRVVPAIKSAHALGCELRIVSDANLFFIETIL 105 (275)
Q Consensus 71 ~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l 105 (275)
.+.|++.+.|+.|.+ +.+++|+|+.....+...+
T Consensus 120 ~~~~~~~~aL~~La~-~~~vaIvSGR~~~~l~~~~ 153 (354)
T PLN02151 120 FMSKKMRNTVRKLAK-CFPTAIVSGRCREKVSSFV 153 (354)
T ss_pred cCCHHHHHHHHHHhc-CCCEEEEECCCHHHHHHHc
Confidence 455666666666663 3566666666666555554
No 254
>PLN02588 glycerol-3-phosphate acyltransferase
Probab=66.94 E-value=26 Score=32.96 Aligned_cols=49 Identities=18% Similarity=0.068 Sum_probs=31.6
Q ss_pred HHHHHHHHcCCcEEEEeCCCHHHHHHHHHH-cCCcCCcceEecCCCccCCCCceee
Q 044553 78 PAIKSAHALGCELRIVSDANLFFIETILEH-LGIRDCFSEINTNPGFVDEEGRLRI 132 (275)
Q Consensus 78 e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~-~gl~~~fd~i~~~~~~~~~~g~~~~ 132 (275)
|..+-+++-+ +.+++|..++-+++..++. +|. |.|++.+... ..|+..+
T Consensus 137 e~~~v~~~~~-~~~vv~~~PrvMve~Flkeyl~~----d~V~g~El~~-~~g~~tG 186 (525)
T PLN02588 137 EMFQVLKRGG-KRVGVSDLPQVMIDVFLRDYLEI----EVVVGRDMKM-VGGYYLG 186 (525)
T ss_pred HHHHHHhhcC-cEEEEecCCHHHHHHHHHHhcCc----ceEeeeeEEE-eeeEEEE
Confidence 3344444444 4556666899999999987 465 5777777654 4455554
No 255
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=60.07 E-value=62 Score=23.28 Aligned_cols=29 Identities=34% Similarity=0.421 Sum_probs=22.9
Q ss_pred chHHHHHHHHHhhhcCCCCeEEEEcCC-CCCcc
Q 044553 153 CKGVVIERIQASLSKEGNKKIIYLGDG-SGDYC 184 (275)
Q Consensus 153 ~K~~~l~~~~~~~~~~~~~~~i~vGDs-~~Di~ 184 (275)
-|...+++++..+. ..+.+.|||| ..|..
T Consensus 50 ~K~~~i~~i~~~fP---~~kfiLIGDsgq~Dpe 79 (100)
T PF09949_consen 50 HKRDNIERILRDFP---ERKFILIGDSGQHDPE 79 (100)
T ss_pred HHHHHHHHHHHHCC---CCcEEEEeeCCCcCHH
Confidence 38999999998873 3589999999 56763
No 256
>TIGR02495 NrdG2 anaerobic ribonucleoside-triphosphate reductase activating protein. This enzyme is a member of the radical-SAM family (pfam04055). It is often gene clustered with the class III (anaerobic) ribonucleotide triphosphate reductase (NrdD, TIGR02487) and presumably fulfills the identical function as NrdG which utilizes S-adenosyl methionine, an iron-sulfur cluster and a reductant (dihydroflavodoxin) to produce a glycine-centered radical in NrdD.
Probab=57.69 E-value=23 Score=28.38 Aligned_cols=31 Identities=10% Similarity=0.223 Sum_probs=26.2
Q ss_pred cCCCCCCHHHHHHHHHHcCCcEEEEeCCCHH
Q 044553 69 RIPIHPRVVPAIKSAHALGCELRIVSDANLF 99 (275)
Q Consensus 69 ~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~ 99 (275)
++.+.|.+.++++.+++.|+.+.+.||+...
T Consensus 72 EPll~~~l~~li~~~~~~g~~v~i~TNg~~~ 102 (191)
T TIGR02495 72 EPTLQAGLPDFLRKVRELGFEVKLDTNGSNP 102 (191)
T ss_pred cccCcHhHHHHHHHHHHCCCeEEEEeCCCCH
Confidence 3556678999999999999999999999643
No 257
>TIGR03365 Bsubt_queE 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. This uncharacterized enzyme, designated QueE, participates in the biosynthesis, from GTP, of 7-cyano-7-deazaguanosine, also called preQ0 because in many species it is a precursor of queuosine. In most Archaea, it is instead the precursor of a different tRNA modified base, archaeosine.
Probab=57.30 E-value=9.7 Score=32.06 Aligned_cols=30 Identities=10% Similarity=0.211 Sum_probs=26.0
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHH
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLF 99 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~ 99 (275)
..+++++.++++.+++.|+++.|-||++..
T Consensus 83 Pll~~~l~~li~~l~~~g~~v~leTNGtl~ 112 (238)
T TIGR03365 83 PALQKPLGELIDLGKAKGYRFALETQGSVW 112 (238)
T ss_pred hhhhHhHHHHHHHHHHCCCCEEEECCCCCc
Confidence 445688999999999999999999999753
No 258
>PRK12288 GTPase RsgA; Reviewed
Probab=55.74 E-value=1.5e+02 Score=26.48 Aligned_cols=31 Identities=16% Similarity=0.132 Sum_probs=18.1
Q ss_pred HHHHHHHHcCCcEEEEeCCCHHHHHHHHHHc
Q 044553 78 PAIKSAHALGCELRIVSDANLFFIETILEHL 108 (275)
Q Consensus 78 e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~ 108 (275)
+.++.+++.|++++.+|+.....+..+++.+
T Consensus 173 ~~~~~y~~~g~~v~~vSA~tg~GideL~~~L 203 (347)
T PRK12288 173 EQLDIYRNIGYRVLMVSSHTGEGLEELEAAL 203 (347)
T ss_pred HHHHHHHhCCCeEEEEeCCCCcCHHHHHHHH
Confidence 3444455567777777766555555555543
No 259
>PRK13717 conjugal transfer protein TrbI; Provisional
Probab=55.68 E-value=33 Score=25.82 Aligned_cols=19 Identities=11% Similarity=0.083 Sum_probs=12.4
Q ss_pred HHHHHHHHHcCCcEEEEeC
Q 044553 77 VPAIKSAHALGCELRIVSD 95 (275)
Q Consensus 77 ~e~L~~L~~~g~~~~IvS~ 95 (275)
.+.|+...+++.-++++|.
T Consensus 85 ~~~L~~yq~~H~~VILVsp 103 (128)
T PRK13717 85 EASLQAWQQKHHAVILVSP 103 (128)
T ss_pred HHHHHHHHHhCCEEEEech
Confidence 3566666666666777774
No 260
>PF02593 dTMP_synthase: Thymidylate synthase; InterPro: IPR003745 This entry describes proteins of unknown function.
Probab=55.60 E-value=32 Score=28.61 Aligned_cols=52 Identities=21% Similarity=0.235 Sum_probs=40.6
Q ss_pred CCCCCCHH-HHHHHHHHcCCcEEEEeCCCHH-----HHHHHHHHcCCcCCcceEecCC
Q 044553 70 IPIHPRVV-PAIKSAHALGCELRIVSDANLF-----FIETILEHLGIRDCFSEINTNP 121 (275)
Q Consensus 70 ~~~~pg~~-e~L~~L~~~g~~~~IvS~~~~~-----~i~~~l~~~gl~~~fd~i~~~~ 121 (275)
..++|++. ++.+.+++.|++..|+.+.... .++..++.+|+.-.|..++|+-
T Consensus 58 y~lHPDl~~~l~~~~~e~g~kavIvp~~~~~~g~~~~lk~~~e~~gi~~~~P~~~CsL 115 (217)
T PF02593_consen 58 YGLHPDLTYELPEIAKEAGVKAVIVPSESPKPGLRRQLKKQLEEFGIEVEFPKPFCSL 115 (217)
T ss_pred eccCchhHHHHHHHHHHcCCCEEEEecCCCccchHHHHHHHHHhcCceeecCcccccc
Confidence 46778866 6777778899999999987666 8999999999876666666543
No 261
>smart00540 LEM in nuclear membrane-associated proteins. LEM, domain in nuclear membrane-associated proteins, including lamino-associated polypeptide 2 and emerin.
Probab=55.46 E-value=14 Score=22.33 Aligned_cols=32 Identities=16% Similarity=0.111 Sum_probs=26.6
Q ss_pred HHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHc
Q 044553 77 VPAIKSAHALGCELRIVSDANLFFIETILEHL 108 (275)
Q Consensus 77 ~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~ 108 (275)
.|+.+.|++.|++.+-||.+++......|..+
T Consensus 9 ~eL~~~L~~~G~~~gPIt~sTR~vy~kkL~~~ 40 (44)
T smart00540 9 AELRAELKQYGLPPGPITDTTRKLYEKKLRKL 40 (44)
T ss_pred HHHHHHHHHcCCCCCCcCcchHHHHHHHHHHH
Confidence 47788899999999999999988877777653
No 262
>PRK10076 pyruvate formate lyase II activase; Provisional
Probab=53.85 E-value=26 Score=28.96 Aligned_cols=37 Identities=5% Similarity=0.092 Sum_probs=27.7
Q ss_pred CCCCCC-HHHHHHHHHHcCCcEEEEeCCCH--HHHHHHHH
Q 044553 70 IPIHPR-VVPAIKSAHALGCELRIVSDANL--FFIETILE 106 (275)
Q Consensus 70 ~~~~pg-~~e~L~~L~~~g~~~~IvS~~~~--~~i~~~l~ 106 (275)
..+.++ +.++++.+++.|+.++|.|||.. ...+.++.
T Consensus 49 Pllq~~fl~~l~~~~k~~gi~~~leTnG~~~~~~~~~l~~ 88 (213)
T PRK10076 49 VLMQAEFATRFLQRLRLWGVSCAIETAGDAPASKLLPLAK 88 (213)
T ss_pred HHcCHHHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHHH
Confidence 445566 58999999999999999999943 34444444
No 263
>TIGR02109 PQQ_syn_pqqE coenzyme PQQ biosynthesis protein E. This model describes coenzyme PQQ biosynthesis protein E, a gene required for the biosynthesis of pyrrolo-quinoline-quinone (coenzyme PQQ). PQQ is required for some glucose dehydrogenases and alcohol dehydrogenases.
Probab=53.37 E-value=29 Score=30.99 Aligned_cols=42 Identities=17% Similarity=0.261 Sum_probs=31.4
Q ss_pred cCCCCCCHHHHHHHHHHcCCcEEEEeCCC---HHHHHHHHHHcCCc
Q 044553 69 RIPIHPRVVPAIKSAHALGCELRIVSDAN---LFFIETILEHLGIR 111 (275)
Q Consensus 69 ~~~~~pg~~e~L~~L~~~g~~~~IvS~~~---~~~i~~~l~~~gl~ 111 (275)
++.++|++.++++.+++.|+.+.|.||+. ...++. +...|++
T Consensus 63 EPll~~~~~~ii~~~~~~g~~~~l~TNG~ll~~e~~~~-L~~~g~~ 107 (358)
T TIGR02109 63 EPLARPDLVELVAHARRLGLYTNLITSGVGLTEARLDA-LADAGLD 107 (358)
T ss_pred cccccccHHHHHHHHHHcCCeEEEEeCCccCCHHHHHH-HHhCCCC
Confidence 45678999999999999999999999985 333433 3345554
No 264
>PRK05301 pyrroloquinoline quinone biosynthesis protein PqqE; Provisional
Probab=52.96 E-value=28 Score=31.38 Aligned_cols=42 Identities=12% Similarity=0.152 Sum_probs=31.4
Q ss_pred cCCCCCCHHHHHHHHHHcCCcEEEEeCCCH---HHHHHHHHHcCCc
Q 044553 69 RIPIHPRVVPAIKSAHALGCELRIVSDANL---FFIETILEHLGIR 111 (275)
Q Consensus 69 ~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~---~~i~~~l~~~gl~ 111 (275)
+..++|++.++++.++++|+.+.+.||+.. +.++ .+...|++
T Consensus 72 EPll~~~~~~il~~~~~~g~~~~i~TNG~ll~~~~~~-~L~~~g~~ 116 (378)
T PRK05301 72 EPLLRKDLEELVAHARELGLYTNLITSGVGLTEARLA-ALKDAGLD 116 (378)
T ss_pred ccCCchhHHHHHHHHHHcCCcEEEECCCccCCHHHHH-HHHHcCCC
Confidence 466789999999999999999999999852 3333 34445654
No 265
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=51.17 E-value=39 Score=30.58 Aligned_cols=23 Identities=30% Similarity=0.398 Sum_probs=16.0
Q ss_pred CCHHHHHHHHHHcCCcEEEEeCC
Q 044553 74 PRVVPAIKSAHALGCELRIVSDA 96 (275)
Q Consensus 74 pg~~e~L~~L~~~g~~~~IvS~~ 96 (275)
.-+..-|-.|-++|+.++|||..
T Consensus 169 ~pvi~~ii~LL~~gv~VgIVTAA 191 (408)
T PF06437_consen 169 NPVIPRIIKLLRRGVKVGIVTAA 191 (408)
T ss_pred chHHHHHHHHHhcCCeEEEEeCC
Confidence 33445555666779999999963
No 266
>KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only]
Probab=50.46 E-value=53 Score=29.73 Aligned_cols=37 Identities=24% Similarity=0.351 Sum_probs=27.3
Q ss_pred chHHHHHHHHHhhhcCCCCeEEEEcCCCCCcccccccCC
Q 044553 153 CKGVVIERIQASLSKEGNKKIIYLGDGSGDYCPSLKLSE 191 (275)
Q Consensus 153 ~K~~~l~~~~~~~~~~~~~~~i~vGDs~~Di~~a~~~~~ 191 (275)
+|...+++++.+++.. -.-++|||+...-.+|+++.+
T Consensus 409 GKescFerI~~RFg~K--~~yvvIgdG~eee~aAK~ln~ 445 (468)
T KOG3107|consen 409 GKESCFERIQSRFGRK--VVYVVIGDGVEEEQAAKALNM 445 (468)
T ss_pred cHHHHHHHHHHHhCCc--eEEEEecCcHHHHHHHHhhCC
Confidence 4788899998888652 366789999766677766554
No 267
>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5.4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.
Probab=48.78 E-value=17 Score=30.15 Aligned_cols=43 Identities=14% Similarity=0.150 Sum_probs=26.6
Q ss_pred HHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEec
Q 044553 76 VVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINT 119 (275)
Q Consensus 76 ~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~ 119 (275)
+.++|+.|++. +.++|||++.-.-+..-+....+...||++++
T Consensus 1 M~~~L~~L~~~-~~vgvVgGsd~~k~~eQl~~~~~~~~fdy~f~ 43 (220)
T PF03332_consen 1 MAELLQKLRKK-VPVGVVGGSDLPKIQEQLGGDDVLDNFDYVFP 43 (220)
T ss_dssp HHHHHHHHHTT-SEEEEEESS-HHHHHHHHSTTTHHHH-SEEEE
T ss_pred CHHHHHHHHhc-CeEEEEcchhHHHHHHHHcccchHhhCCeeec
Confidence 46889999875 99999999976654433321122345676654
No 268
>COG1162 Predicted GTPases [General function prediction only]
Probab=47.59 E-value=1.4e+02 Score=26.12 Aligned_cols=31 Identities=23% Similarity=0.207 Sum_probs=21.1
Q ss_pred HHHHHHHHcCCcEEEEeCCCHHHHHHHHHHc
Q 044553 78 PAIKSAHALGCELRIVSDANLFFIETILEHL 108 (275)
Q Consensus 78 e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~ 108 (275)
+.+....+-||+++.+|.....-++.+...+
T Consensus 132 ~~~~~y~~~gy~v~~~s~~~~~~~~~l~~~l 162 (301)
T COG1162 132 ELLREYEDIGYPVLFVSAKNGDGLEELAELL 162 (301)
T ss_pred HHHHHHHhCCeeEEEecCcCcccHHHHHHHh
Confidence 5666677789999988876655555555543
No 269
>PF05988 DUF899: Bacterial protein of unknown function (DUF899); InterPro: IPR010296 This family consists of uncharacterised bacterial proteins of unknown function which are thioredoxin-like.
Probab=47.30 E-value=70 Score=26.44 Aligned_cols=49 Identities=22% Similarity=0.220 Sum_probs=40.0
Q ss_pred CCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCcc
Q 044553 74 PRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFV 124 (275)
Q Consensus 74 pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~ 124 (275)
+++...+..|.+++..+++||-.+...+...-++.|+. |..+-+....+
T Consensus 93 D~~~g~l~hL~~rd~tfa~vSraP~~~i~afk~rmGW~--~pw~Ss~gs~F 141 (211)
T PF05988_consen 93 DHIDGALRHLHARDTTFAVVSRAPLEKIEAFKRRMGWT--FPWYSSYGSDF 141 (211)
T ss_pred hhhhhhHHHHHhCCceEEEEeCCCHHHHHHHHHhcCCC--ceEEEcCCCcc
Confidence 45557889999999999999999999999999999997 56555544433
No 270
>PRK12289 GTPase RsgA; Reviewed
Probab=46.41 E-value=2.2e+02 Score=25.56 Aligned_cols=16 Identities=25% Similarity=0.495 Sum_probs=12.5
Q ss_pred CCCCchHHHHHHHHHh
Q 044553 149 PPNMCKGVVIERIQAS 164 (275)
Q Consensus 149 ~~~~~K~~~l~~~~~~ 164 (275)
+.+.+|...++.++..
T Consensus 180 ~SgVGKSSLIN~L~~~ 195 (352)
T PRK12289 180 PSGVGKSSLINRLIPD 195 (352)
T ss_pred CCCCCHHHHHHHHcCc
Confidence 4577899999998843
No 271
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=45.08 E-value=11 Score=31.56 Aligned_cols=37 Identities=22% Similarity=0.316 Sum_probs=23.4
Q ss_pred CchHHHHHHHHHhhhcC--CCCeEEEEcCCCCCcccccc
Q 044553 152 MCKGVVIERIQASLSKE--GNKKIIYLGDGSGDYCPSLK 188 (275)
Q Consensus 152 ~~K~~~l~~~~~~~~~~--~~~~~i~vGDs~~Di~~a~~ 188 (275)
..|..+++.++...... .+..++|+||..+|-.+-..
T Consensus 164 ~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~ 202 (235)
T PF02358_consen 164 VNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRA 202 (235)
T ss_dssp --HHHHHHHHHTTS---------EEEEESSHHHHHHHHT
T ss_pred CChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHH
Confidence 44999999999886432 12579999999888754433
No 272
>TIGR02826 RNR_activ_nrdG3 anaerobic ribonucleoside-triphosphate reductase activating protein. Members of this family represent a set of proteins related to, yet architecturally different from, the activating protein for the glycine radical-containing, oxygen-sensitive ribonucleoside-triphosphate reductase (RNR) as described in model TIGR02491. Members of this family are found paired with members of a similarly divergent set of anaerobic ribonucleoside-triphosphate reductases. Identification of this protein as an RNR activitating protein is partly from pairing with a candidate RNR. It is further supported by our finding that upstream of these operons are examples of a conserved regulatory element (described Rodionov and Gelfand) that is found in nearly all bacteria and that occurs specifically upstream of operons for all three classes of RNR genes.
Probab=44.50 E-value=43 Score=25.93 Aligned_cols=26 Identities=8% Similarity=0.082 Sum_probs=22.7
Q ss_pred CCCHHHHHHHHHHcCCcEEEEeCCCH
Q 044553 73 HPRVVPAIKSAHALGCELRIVSDANL 98 (275)
Q Consensus 73 ~pg~~e~L~~L~~~g~~~~IvS~~~~ 98 (275)
.+.+.++++.+++.|+++.+-||+..
T Consensus 74 ~~~l~~ll~~lk~~Gl~i~l~Tg~~~ 99 (147)
T TIGR02826 74 REALLSLLKIFKEKGLKTCLYTGLEP 99 (147)
T ss_pred HHHHHHHHHHHHHCCCCEEEECCCCC
Confidence 46788999999999999999999754
No 273
>TIGR03470 HpnH hopanoid biosynthesis associated radical SAM protein HpnH. The sequences represented by this model are members of the radical SAM superfamily of enzymes (pfam04055). These enzymes utilize an iron-sulfur redox cluster and S-adenosylmethionine to carry out diverse radical mediated reactions. The members of this clade are frequently found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. The linkage between SHC and this radical SAM enzyme is strong; one is nearly always observed in the same genome where the other is found. A hopanoid biosynthesis locus was described in Zymomonas mobilis consisting of the genes HpnA-E and SHC (HpnF). Continuing past SHC are found a phosphorylase enzyme (ZMO0873, i.e. HpnG, TIGR03468) and this radical SAM enzyme (ZMO0874) which we name here HpnH. Granted, in Z. mobilis, HpnH is in a convergent orientation with respect to HpnA-G, but one gene beyond HpnH
Probab=44.07 E-value=25 Score=31.00 Aligned_cols=30 Identities=17% Similarity=0.185 Sum_probs=26.8
Q ss_pred cCCCCCCHHHHHHHHHHcCCcEEEEeCCCH
Q 044553 69 RIPIHPRVVPAIKSAHALGCELRIVSDANL 98 (275)
Q Consensus 69 ~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~ 98 (275)
++.++|.+.++++.++++|..+.+.||+..
T Consensus 82 EPLL~pdl~eiv~~~~~~g~~v~l~TNG~l 111 (318)
T TIGR03470 82 EPLLHPEIDEIVRGLVARKKFVYLCTNALL 111 (318)
T ss_pred cccccccHHHHHHHHHHcCCeEEEecCcee
Confidence 466789999999999999999999999964
No 274
>PF13911 AhpC-TSA_2: AhpC/TSA antioxidant enzyme
Probab=43.03 E-value=72 Score=23.03 Aligned_cols=39 Identities=21% Similarity=0.196 Sum_probs=29.7
Q ss_pred HHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEec
Q 044553 78 PAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINT 119 (275)
Q Consensus 78 e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~ 119 (275)
+....|++.|+++++|+-++...++...+..++. ++ |++
T Consensus 4 ~~~~~l~~~gv~lv~I~~g~~~~~~~f~~~~~~p--~~-ly~ 42 (115)
T PF13911_consen 4 RRKPELEAAGVKLVVIGCGSPEGIEKFCELTGFP--FP-LYV 42 (115)
T ss_pred HhHHHHHHcCCeEEEEEcCCHHHHHHHHhccCCC--Cc-EEE
Confidence 4467788899999999998886688888776664 34 654
No 275
>TIGR03278 methan_mark_10 putative methanogenesis marker protein 10. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The presence of motifs with seven invariant Cys residues in the N-terminal 50 residues, including three instances of CXXC, would be consistent with function as an oxidoreductase with FeS clusters. The exact function is unknown, but likely is linked to methanogenesis. In most genomes, the member of this family is encoded by a gene next to, and divergently transcribed from, the methyl coenzyme M reductase operon.
Probab=42.43 E-value=44 Score=30.62 Aligned_cols=43 Identities=19% Similarity=0.243 Sum_probs=30.5
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEE-eCCCH---HHHHHHHHHcCCcC
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIV-SDANL---FFIETILEHLGIRD 112 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~Iv-S~~~~---~~i~~~l~~~gl~~ 112 (275)
...+|.+.++|+.+++.|++++|. ||+.. ......+..+|++.
T Consensus 85 pl~~~~l~eLl~~lk~~gi~taI~~TnG~~l~~~e~~~~L~~~gld~ 131 (404)
T TIGR03278 85 VSCYPELEELTKGLSDLGLPIHLGYTSGKGFDDPEIAEFLIDNGVRE 131 (404)
T ss_pred cccCHHHHHHHHHHHhCCCCEEEeCCCCcccCCHHHHHHHHHcCCCE
Confidence 557799999999999999999996 99642 22233333456653
No 276
>cd05014 SIS_Kpsf KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.
Probab=41.72 E-value=24 Score=26.00 Aligned_cols=28 Identities=4% Similarity=0.011 Sum_probs=23.9
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEeCCCHH
Q 044553 72 IHPRVVPAIKSAHALGCELRIVSDANLF 99 (275)
Q Consensus 72 ~~pg~~e~L~~L~~~g~~~~IvS~~~~~ 99 (275)
-.+.+.++++.++++|.+++.+|+....
T Consensus 59 ~t~~~~~~~~~a~~~g~~vi~iT~~~~s 86 (128)
T cd05014 59 ETDELLNLLPHLKRRGAPIIAITGNPNS 86 (128)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 4577889999999999999999997654
No 277
>TIGR02744 TrbI_Ftype type-F conjugative transfer system protein TrbI. This protein is an essential component of the F-type conjugative transfer sytem for plasmid DNA transfer and has been shown to be localized to the periplasm.
Probab=40.53 E-value=1.5e+02 Score=21.89 Aligned_cols=18 Identities=17% Similarity=0.178 Sum_probs=11.1
Q ss_pred HHHHHHHHcCCcEEEEeC
Q 044553 78 PAIKSAHALGCELRIVSD 95 (275)
Q Consensus 78 e~L~~L~~~g~~~~IvS~ 95 (275)
+.|....+.+.-++++|.
T Consensus 73 ~~L~~yq~~H~~vILvsp 90 (112)
T TIGR02744 73 AELQAWQAQHHAIILVSP 90 (112)
T ss_pred HHHHHHHHhCCEEEEech
Confidence 556666666666666663
No 278
>cd05008 SIS_GlmS_GlmD_1 SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal glutaminase domain and two C-terminal SIS domains and catalyzes the first step in hexosamine metabolism, converting fructose 6-phosphate into glucosamine 6-phosphate using glutamine as nitrogen source. The glutaminase domain hydrolyzes glutamine to glutamate and ammonia. Ammonia is transferred through a channel to the isomerase domain for glucosamine 6-phosphate synthesis. The end product of the pathway is N-acetylglucosamine, which plays multiple roles in eukaryotic cells including being a building block of bacterial and fungal cell walls. In the absence of glutamine, GlmS catalyzes the isomerization of fructose 6-phosphate into glucose 6- phosphate (PGI-like activity). Glucosamine-6-phosphate deaminase (GlmD) cont
Probab=40.31 E-value=32 Score=25.25 Aligned_cols=29 Identities=10% Similarity=0.126 Sum_probs=23.5
Q ss_pred CCCHHHHHHHHHHcCCcEEEEeCCCHHHH
Q 044553 73 HPRVVPAIKSAHALGCELRIVSDANLFFI 101 (275)
Q Consensus 73 ~pg~~e~L~~L~~~g~~~~IvS~~~~~~i 101 (275)
.+++.+.++.++++|.+++.+|+.....+
T Consensus 59 t~e~~~~~~~a~~~g~~vi~iT~~~~s~l 87 (126)
T cd05008 59 TADTLAALRLAKEKGAKTVAITNVVGSTL 87 (126)
T ss_pred CHHHHHHHHHHHHcCCeEEEEECCCCChH
Confidence 46788899999999999999999765433
No 279
>TIGR02494 PFLE_PFLC glycyl-radical enzyme activating protein family. This subset of the radical-SAM family (pfam04055) includes a number of probable activating proteins acting on different enzymes all requiring an amino-acid-centered radical. The closest relatives to this family are the pyruvate-formate lyase activating enzyme (PflA, 1.97.1.4, TIGR02493) and the anaerobic ribonucleotide reductase activating enzyme (TIGR02491). Included within this subfamily are activators of hydroxyphenyl acetate decarboxylase (HdpA, ), benzylsuccinate synthase (BssD, ), gycerol dehydratase (DhaB2, ) as well as enzymes annotated in E. coli as activators of different isozymes of pyruvate-formate lyase (PFLC and PFLE) however, these appear to lack characterization and may activate enzymes with distinctive functions. Most of the sequence-level variability between these forms is concentrated within an N-terminal domain which follows a conserved group of three cysteines and contains a variable pattern of 0
Probab=40.24 E-value=40 Score=29.10 Aligned_cols=29 Identities=10% Similarity=0.244 Sum_probs=24.3
Q ss_pred CCCCCCH-HHHHHHHHHcCCcEEEEeCCCH
Q 044553 70 IPIHPRV-VPAIKSAHALGCELRIVSDANL 98 (275)
Q Consensus 70 ~~~~pg~-~e~L~~L~~~g~~~~IvS~~~~ 98 (275)
..+.++. .++++.+++.|+.+.+.||+..
T Consensus 136 Pll~~~~l~~l~~~~k~~g~~~~i~TnG~~ 165 (295)
T TIGR02494 136 PLLQPEFALALLQACHERGIHTAVETSGFT 165 (295)
T ss_pred hhchHHHHHHHHHHHHHcCCcEeeeCCCCC
Confidence 4466775 6999999999999999999953
No 280
>TIGR00157 ribosome small subunit-dependent GTPase A. The Aquifex aeolicus ortholog is split into consecutive open reading frames. Consequently, this model was build in fragment mode (-f option).
Probab=39.99 E-value=2.3e+02 Score=23.85 Aligned_cols=31 Identities=16% Similarity=0.246 Sum_probs=22.2
Q ss_pred HHHHHHHHcCCcEEEEeCCCHHHHHHHHHHc
Q 044553 78 PAIKSAHALGCELRIVSDANLFFIETILEHL 108 (275)
Q Consensus 78 e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~ 108 (275)
+.++.+++.|+++..+|+.....+..+++.+
T Consensus 88 ~~~~~~~~~g~~v~~~SAktg~gi~eLf~~l 118 (245)
T TIGR00157 88 EQLDIYRNIGYQVLMTSSKNQDGLKELIEAL 118 (245)
T ss_pred HHHHHHHHCCCeEEEEecCCchhHHHHHhhh
Confidence 4556666778888888887777777776654
No 281
>TIGR02493 PFLA pyruvate formate-lyase 1-activating enzyme. An iron-sulfur protein with a radical-SAM domain (pfam04055). A single glycine residue in EC 2.3.1.54, formate C-acetyltransferase (formate-pyruvate lyase), is oxidized to the corresponding radical by transfer of H from its CH2 to AdoMet with concomitant cleavage of the latter. The reaction requires Fe2+. The first stage is reduction of the AdoMet to give methionine and the 5'-deoxyadenosin-5-yl radical, which then abstracts a hydrogen radical from the glycine residue.
Probab=39.79 E-value=54 Score=27.12 Aligned_cols=39 Identities=15% Similarity=0.183 Sum_probs=29.0
Q ss_pred cCCCCCC-HHHHHHHHHHcCCcEEEEeCCC----HHHHHHHHHH
Q 044553 69 RIPIHPR-VVPAIKSAHALGCELRIVSDAN----LFFIETILEH 107 (275)
Q Consensus 69 ~~~~~pg-~~e~L~~L~~~g~~~~IvS~~~----~~~i~~~l~~ 107 (275)
++.+.|+ +.++++.+++.|+++.+.||+. ...+..+++.
T Consensus 75 EPll~~~~~~~li~~~~~~g~~~~i~TNG~~~~~~~~~~~ll~~ 118 (235)
T TIGR02493 75 EPLLQPEFLSELFKACKELGIHTCLDTSGFLGGCTEAADELLEY 118 (235)
T ss_pred ccccCHHHHHHHHHHHHHCCCCEEEEcCCCCCccHHHHHHHHHh
Confidence 3456677 4599999999999999999993 4455555553
No 282
>PRK11145 pflA pyruvate formate lyase-activating enzyme 1; Provisional
Probab=39.38 E-value=46 Score=27.85 Aligned_cols=29 Identities=3% Similarity=0.037 Sum_probs=23.9
Q ss_pred CCCCCCH-HHHHHHHHHcCCcEEEEeCCCH
Q 044553 70 IPIHPRV-VPAIKSAHALGCELRIVSDANL 98 (275)
Q Consensus 70 ~~~~pg~-~e~L~~L~~~g~~~~IvS~~~~ 98 (275)
+.+.++. .++++.+++.|+++.+.||+..
T Consensus 81 Pll~~~~~~~l~~~~k~~g~~i~l~TNG~~ 110 (246)
T PRK11145 81 AILQAEFVRDWFRACKKEGIHTCLDTNGFV 110 (246)
T ss_pred HhcCHHHHHHHHHHHHHcCCCEEEECCCCC
Confidence 4456674 5999999999999999999974
No 283
>TIGR02886 spore_II_AA anti-sigma F factor antagonist. The anti-sigma F factor antagonist, also called stage II sporulation protein AA, is a protein universal among endospore-forming bacteria, all of which belong to the Firmcutes
Probab=39.04 E-value=61 Score=22.93 Aligned_cols=35 Identities=14% Similarity=0.130 Sum_probs=27.6
Q ss_pred HHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCc
Q 044553 78 PAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCF 114 (275)
Q Consensus 78 e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~f 114 (275)
.+.+.++++|.++.++. ....++.+++..|+.+.|
T Consensus 62 ~~~~~~~~~g~~l~l~~--~~~~v~~~l~~~gl~~~~ 96 (106)
T TIGR02886 62 GRYKKIKNEGGEVIVCN--VSPAVKRLFELSGLFKII 96 (106)
T ss_pred HHHHHHHHcCCEEEEEe--CCHHHHHHHHHhCCceEE
Confidence 56777888899888776 346788999999988765
No 284
>PF04123 DUF373: Domain of unknown function (DUF373); InterPro: IPR007254 This archaeal family of unknown function is predicted to be an integral membrane protein with six transmembrane regions.
Probab=38.86 E-value=2.9e+02 Score=24.78 Aligned_cols=23 Identities=17% Similarity=0.411 Sum_probs=16.8
Q ss_pred HHHHHHhhhcCCCCeEEEEcCCCCCc
Q 044553 158 IERIQASLSKEGNKKIIYLGDGSGDY 183 (275)
Q Consensus 158 l~~~~~~~~~~~~~~~i~vGDs~~Di 183 (275)
++.++.++ +++.++.|.||..|=
T Consensus 90 ld~vl~~~---~~~~~i~VsDGaeDE 112 (344)
T PF04123_consen 90 LDEVLSKF---DPDSAIVVSDGAEDE 112 (344)
T ss_pred HHHHHHhC---CCCEEEEEecChhhh
Confidence 44555554 368999999999886
No 285
>PF00875 DNA_photolyase: DNA photolyase from Prosite.; InterPro: IPR006050 DNA photolyases are enzymes that bind to DNA containing pyrimidine dimers: on absorption of visible light, they catalyse dimer splitting into the constituent monomers, a process called photoreactivation []. This is a DNA repair mechanism, repairing mismatched pyrimidine dimers induced by exposure to ultra-violet light []. The precise mechanisms involved in substrate binding, conversion of light energy to the mechanical energy needed to rupture the cyclobutane ring, and subsequent release of the product are uncertain []. Analysis of DNA lyases has revealed the presence of an intrinsic chromophore, all monomers containing a reduced FAD moiety, and, in addition, either a reduced pterin or 8-hydroxy-5-diazaflavin as a second chromophore [, ]. Either chromophore may act as the primary photon acceptor, peak absorptions occurring in the blue region of the spectrum and in the UV-B region, at a wavelength around 290nm []. This domain binds a light harvesting cofactor.; GO: 0003913 DNA photolyase activity, 0006281 DNA repair; PDB: 3UMV_A 2J07_A 1IQU_A 2J09_A 2J08_A 1IQR_A 1DNP_A 3FY4_B 2VTB_A 2J4D_B ....
Probab=38.80 E-value=27 Score=27.27 Aligned_cols=45 Identities=13% Similarity=0.155 Sum_probs=34.1
Q ss_pred CCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCC
Q 044553 74 PRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPG 122 (275)
Q Consensus 74 pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~ 122 (275)
.++.++=+.|++.|+++.+..+.+...+..+++.+++. .|+++..
T Consensus 53 ~sL~~L~~~L~~~g~~L~v~~g~~~~~l~~l~~~~~~~----~V~~~~~ 97 (165)
T PF00875_consen 53 ESLADLQESLRKLGIPLLVLRGDPEEVLPELAKEYGAT----AVYFNEE 97 (165)
T ss_dssp HHHHHHHHHHHHTTS-EEEEESSHHHHHHHHHHHHTES----EEEEE--
T ss_pred HHHHHHHHHHHhcCcceEEEecchHHHHHHHHHhcCcC----eeEeccc
Confidence 44556777888899999999999999999999988864 6776554
No 286
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=37.52 E-value=56 Score=24.14 Aligned_cols=41 Identities=12% Similarity=0.113 Sum_probs=22.6
Q ss_pred CCCHHHHHHHHHHcCC-cE-EEEeCCCHHHHHHHHHHcCCcCC
Q 044553 73 HPRVVPAIKSAHALGC-EL-RIVSDANLFFIETILEHLGIRDC 113 (275)
Q Consensus 73 ~pg~~e~L~~L~~~g~-~~-~IvS~~~~~~i~~~l~~~gl~~~ 113 (275)
.+.+.++++.|++.|. .+ .++-+.........+.++|++.+
T Consensus 64 ~~~~~~~~~~L~~~~~~~i~i~~GG~~~~~~~~~~~~~G~d~~ 106 (122)
T cd02071 64 MTLFPEVIELLRELGAGDILVVGGGIIPPEDYELLKEMGVAEI 106 (122)
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEECCCCHHHHHHHHHCCCCEE
Confidence 3556777888887754 33 23333233333455666786544
No 287
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=36.90 E-value=66 Score=23.49 Aligned_cols=36 Identities=11% Similarity=0.239 Sum_probs=26.1
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcC
Q 044553 72 IHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLG 109 (275)
Q Consensus 72 ~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~g 109 (275)
-.+++.+.++.++++|.+++.+|+... +....++.|
T Consensus 55 ~t~e~i~~~~~a~~~g~~iI~IT~~~~--l~~~~~~~~ 90 (119)
T cd05017 55 NTEETLSAVEQAKERGAKIVAITSGGK--LLEMAREHG 90 (119)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHcC
Confidence 346788899999999999999997542 444444444
No 288
>PF01976 DUF116: Protein of unknown function DUF116; InterPro: IPR002829 These archaeal and bacterial proteins have no known function. Members of this family contain seven conserved cysteines and may also be an integral membrane protein.
Probab=36.43 E-value=78 Score=24.86 Aligned_cols=35 Identities=14% Similarity=0.213 Sum_probs=28.1
Q ss_pred CHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCc
Q 044553 75 RVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIR 111 (275)
Q Consensus 75 g~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~ 111 (275)
.+-++++...++|++++|+|+++ .++.+++....+
T Consensus 74 ~Ig~l~~lae~~g~~v~i~~Ggt--~ar~~ik~~~p~ 108 (158)
T PF01976_consen 74 DIGDLKKLAEKYGYKVYIATGGT--LARKIIKEYRPK 108 (158)
T ss_pred chhHHHHHHHHcCCEEEEEcChH--HHHHHHHHhCCC
Confidence 56778888889999999999984 677778776554
No 289
>PF08444 Gly_acyl_tr_C: Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region; InterPro: IPR013652 This entry represents mammalian-specific glycine N-acyltransferase (also called aralkyl acyl-CoA:amino acid N-acyltransferase; 2.3.1.13 from EC). Mitochondrial acyltransferases catalyse the transfer of an acyl group from acyl-CoA to the N terminus of glycine to produce N-acylglycine. These enzymes can conjugate a multitude of substrates to form a variety of N-acylglycines. The CoA derivatives of a number of aliphatic and aromatic acids, but not phenylacetyl-CoA or (indol-3-yl)acetyl-CoA, can act as donor [, ].
Probab=36.02 E-value=75 Score=22.39 Aligned_cols=35 Identities=17% Similarity=0.098 Sum_probs=29.6
Q ss_pred HHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCc
Q 044553 77 VPAIKSAHALGCELRIVSDANLFFIETILEHLGIR 111 (275)
Q Consensus 77 ~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~ 111 (275)
...++.|+++|++++.-+........+.++.+|+.
T Consensus 42 ~~~~~~L~~~g~P~Y~hv~~~N~~~~r~~~~lg~~ 76 (89)
T PF08444_consen 42 YHLAQYLHKLGFPFYGHVDEDNEASQRLSKSLGFI 76 (89)
T ss_pred HHHHHHHHHCCCCeEeehHhccHHHHHHHHHCCCe
Confidence 35778899999999999988888888888888863
No 290
>KOG2832 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=35.53 E-value=1e+02 Score=27.78 Aligned_cols=45 Identities=16% Similarity=0.113 Sum_probs=36.8
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcc
Q 044553 70 IPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFS 115 (275)
Q Consensus 70 ~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd 115 (275)
..-.||+.-+|..+.. .|.+++.|+...-.+..+++.++-..+..
T Consensus 213 f~kRPgvD~FL~~~a~-~yEIVi~sse~gmt~~pl~d~lDP~g~Is 257 (393)
T KOG2832|consen 213 FKKRPGVDYFLGHLAK-YYEIVVYSSEQGMTVFPLLDALDPKGYIS 257 (393)
T ss_pred eccCchHHHHHHhhcc-cceEEEEecCCccchhhhHhhcCCcceEE
Confidence 3467999999999984 59999999999888999999876555443
No 291
>PF00578 AhpC-TSA: AhpC/TSA family; InterPro: IPR000866 Peroxiredoxins (Prxs) are a ubiquitous family of antioxidant enzymes that also control cytokine-induced peroxide levels which mediate signal transduction in mammalian cells. Prxs can be regulated by changes to phosphorylation, redox and possibly oligomerisation states. Prxs are divided into three classes: typical 2-Cys Prxs; atypical 2-Cys Prxs; and 1-Cys Prxs. All Prxs share the same basic catalytic mechanism, in which an active-site cysteine (the peroxidatic cysteine) is oxidised to a sulphenic acid by the peroxide substrate. The recycling of the sulphenic acid back to a thiol is what distinguishes the three enzyme classes. Using crystal structures, a detailed catalytic cycle has been derived for typical 2-Cys Prxs, including a model for the redox-regulated oligomeric state proposed to control enzyme activity []. Alkyl hydroperoxide reductase (AhpC) is responsible for directly reducing organic hyperoxides in its reduced dithiol form. Thiol specific antioxidant (TSA) is a physiologically important antioxidant which constitutes an enzymatic defence against sulphur-containing radicals. This family contains AhpC and TSA, as well as related proteins.; GO: 0016209 antioxidant activity, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1QMV_A 1PRX_B 3HJP_C 3HA9_A 2V41_G 2V32_C 2V2G_C 3LWA_A 3IA1_B 1ZYE_G ....
Probab=35.11 E-value=58 Score=23.49 Aligned_cols=37 Identities=19% Similarity=0.181 Sum_probs=30.1
Q ss_pred CHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCc
Q 044553 75 RVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIR 111 (275)
Q Consensus 75 g~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~ 111 (275)
...++...+++.|+.++.+|......++..++..++.
T Consensus 47 ~l~~~~~~~~~~~~~vi~is~d~~~~~~~~~~~~~~~ 83 (124)
T PF00578_consen 47 ELNELYKKYKDKGVQVIGISTDDPEEIKQFLEEYGLP 83 (124)
T ss_dssp HHHHHHHHHHTTTEEEEEEESSSHHHHHHHHHHHTCS
T ss_pred HHHHHhhhhccceEEeeecccccccchhhhhhhhccc
Confidence 3446777778889999999999998899999988753
No 292
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=34.89 E-value=39 Score=30.23 Aligned_cols=30 Identities=27% Similarity=0.299 Sum_probs=22.5
Q ss_pred ceEEEEEcCCcccCCcc-----------HHHHHHHhCCChH
Q 044553 3 GIVVIFDFDKTIIDCDS-----------DNFVVDELGATDL 32 (275)
Q Consensus 3 ~~~viFD~DGTL~d~~~-----------~~~~~~~~g~~~~ 32 (275)
+++|-||+|.||+.-.+ ..++.+.+|+|+.
T Consensus 12 i~~~GFDmDyTLa~Y~~~~~e~L~y~~~~~~LV~~~gYp~~ 52 (343)
T TIGR02244 12 IQVFGFDMDYTLAQYKSPELEALIYDLAKERLVKRFGYPEE 52 (343)
T ss_pred CCEEEECccccccccChHHHHHHHHHHHHHHHHHhcCCChH
Confidence 68999999999999765 1445566677743
No 293
>COG1180 PflA Pyruvate-formate lyase-activating enzyme [Posttranslational modification, protein turnover, chaperones]
Probab=34.04 E-value=53 Score=28.05 Aligned_cols=25 Identities=8% Similarity=0.143 Sum_probs=22.5
Q ss_pred CCCHHHHHHHHHHcCCcEEEEeCCC
Q 044553 73 HPRVVPAIKSAHALGCELRIVSDAN 97 (275)
Q Consensus 73 ~pg~~e~L~~L~~~g~~~~IvS~~~ 97 (275)
++.+.++++.++++|+.+++.||+.
T Consensus 98 ~e~~~~~~~~ake~Gl~~~l~TnG~ 122 (260)
T COG1180 98 AEFALDLLRAAKERGLHVALDTNGF 122 (260)
T ss_pred HHHHHHHHHHHHHCCCcEEEEcCCC
Confidence 4778899999999999999999984
No 294
>cd05710 SIS_1 A subgroup of the SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars.
Probab=33.83 E-value=45 Score=24.54 Aligned_cols=28 Identities=21% Similarity=0.086 Sum_probs=23.3
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEeCCCHH
Q 044553 72 IHPRVVPAIKSAHALGCELRIVSDANLF 99 (275)
Q Consensus 72 ~~pg~~e~L~~L~~~g~~~~IvS~~~~~ 99 (275)
-.+.+.+.++.++++|.+++.+|+....
T Consensus 59 ~t~~~~~~~~~a~~~g~~vi~iT~~~~s 86 (120)
T cd05710 59 NTKETVAAAKFAKEKGATVIGLTDDEDS 86 (120)
T ss_pred CChHHHHHHHHHHHcCCeEEEEECCCCC
Confidence 3467888999999999999999987654
No 295
>PF14336 DUF4392: Domain of unknown function (DUF4392)
Probab=33.66 E-value=3e+02 Score=23.94 Aligned_cols=38 Identities=24% Similarity=0.385 Sum_probs=28.0
Q ss_pred CCCHHHHHHHHHHcCCcEEEEeCCCH-HHHHHHHHHcCC
Q 044553 73 HPRVVPAIKSAHALGCELRIVSDANL-FFIETILEHLGI 110 (275)
Q Consensus 73 ~pg~~e~L~~L~~~g~~~~IvS~~~~-~~i~~~l~~~gl 110 (275)
.||+..+-+.|+..|.++.|+|.... ..++..++..+.
T Consensus 62 P~GA~aLa~aL~~lG~~~~ivtd~~~~~~~~~~~~~~~~ 100 (291)
T PF14336_consen 62 PPGAAALARALQALGKEVVIVTDERCAPVVKAAVRAAGL 100 (291)
T ss_pred hHHHHHHHHHHHHcCCeEEEEECHHHHHHHHHHHHHHhh
Confidence 37889999999999999999998633 345555554444
No 296
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=31.26 E-value=38 Score=33.90 Aligned_cols=40 Identities=20% Similarity=0.334 Sum_probs=36.3
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCC
Q 044553 71 PIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGI 110 (275)
Q Consensus 71 ~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl 110 (275)
+|...+++.+..+++.|++++.||+.....++.+.+..|+
T Consensus 590 PPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgI 629 (1019)
T KOG0203|consen 590 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGI 629 (1019)
T ss_pred CCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheee
Confidence 6788999999999999999999999988888888888875
No 297
>TIGR02765 crypto_DASH cryptochrome, DASH family. Photolyases and cryptochromes are related flavoproteins. Photolyases harness the energy of blue light to repair DNA damage by removing pyrimidine dimers. Cryptochromes do not repair DNA and are presumed to act instead in some other (possibly unknown) process such as entraining circadian rhythms. This model describes the cryptochrome DASH subfamily, one of at least five major subfamilies, which is found in plants, animals, marine bacteria, etc. Members of this family bind both folate and FAD. They may show weak photolyase activity in vitro but have not been shown to affect DNA repair in vivo. Rather, DASH family cryptochromes have been shown to bind RNA (Vibrio cholerae VC1814), or DNA, and seem likely to act in light-responsive regulatory processes.
Probab=31.12 E-value=70 Score=29.38 Aligned_cols=38 Identities=21% Similarity=0.302 Sum_probs=24.2
Q ss_pred CCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCc
Q 044553 74 PRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIR 111 (275)
Q Consensus 74 pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~ 111 (275)
.++.++=+.|++.|+++.+..+.+...+..+++.+++.
T Consensus 61 esL~~L~~~L~~~g~~L~v~~G~~~~vl~~L~~~~~~~ 98 (429)
T TIGR02765 61 ESLKDLRTSLRKLGSDLLVRSGKPEDVLPELIKELGVR 98 (429)
T ss_pred HHHHHHHHHHHHcCCCeEEEeCCHHHHHHHHHHHhCCC
Confidence 34445555666667777777776666666666666654
No 298
>TIGR03127 RuMP_HxlB 6-phospho 3-hexuloisomerase. Members of this protein family are 6-phospho 3-hexuloisomerase (PHI), or the PHI domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin.
Probab=30.87 E-value=50 Score=26.09 Aligned_cols=30 Identities=13% Similarity=0.177 Sum_probs=24.0
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEeCCCHHHH
Q 044553 72 IHPRVVPAIKSAHALGCELRIVSDANLFFI 101 (275)
Q Consensus 72 ~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i 101 (275)
-.+.+.++++.++++|.+++.+|+.....+
T Consensus 84 ~t~~~i~~~~~ak~~g~~ii~IT~~~~s~l 113 (179)
T TIGR03127 84 ETESLVTVAKKAKEIGATVAAITTNPESTL 113 (179)
T ss_pred CcHHHHHHHHHHHHCCCeEEEEECCCCCch
Confidence 346788899999999999999998765433
No 299
>PF04312 DUF460: Protein of unknown function (DUF460); InterPro: IPR007408 This is an archaeal protein of unknown function.
Probab=30.71 E-value=1.5e+02 Score=22.79 Aligned_cols=35 Identities=11% Similarity=0.094 Sum_probs=28.1
Q ss_pred HHHHHHHHHHcCCcEEEEeC--CCHHHHHHHHHHcCC
Q 044553 76 VVPAIKSAHALGCELRIVSD--ANLFFIETILEHLGI 110 (275)
Q Consensus 76 ~~e~L~~L~~~g~~~~IvS~--~~~~~i~~~l~~~gl 110 (275)
..++++++.+.|.++.|+|. -+...++.+...++-
T Consensus 65 ~~evi~~I~~~G~PviVAtDV~p~P~~V~Kia~~f~A 101 (138)
T PF04312_consen 65 RSEVIEWISEYGKPVIVATDVSPPPETVKKIARSFNA 101 (138)
T ss_pred HHHHHHHHHHcCCEEEEEecCCCCcHHHHHHHHHhCC
Confidence 34788899999999999996 466788888777664
No 300
>smart00497 IENR1 Intron encoded nuclease repeat motif. Repeat of unknown function, but possibly DNA-binding via helix-turn-helix motif (Ponting, unpublished).
Probab=29.71 E-value=77 Score=19.13 Aligned_cols=28 Identities=25% Similarity=0.369 Sum_probs=22.6
Q ss_pred ceEEEEEcCCccc-CCccHHHHHHHhCCC
Q 044553 3 GIVVIFDFDKTII-DCDSDNFVVDELGAT 30 (275)
Q Consensus 3 ~~~viFD~DGTL~-d~~~~~~~~~~~g~~ 30 (275)
+.+..+|.+|+++ ...+...+.+.+|..
T Consensus 2 k~V~~~d~~~~~i~~f~S~~eAa~~lg~~ 30 (53)
T smart00497 2 KPVYVYDLDGNLIGEFSSIREAAKYLGIS 30 (53)
T ss_pred ccEEEEeCCCCEEEEecCHHHHHHHhCCC
Confidence 4577899999998 567788888888874
No 301
>PF01380 SIS: SIS domain SIS domain web page.; InterPro: IPR001347 The SIS (Sugar ISomerase) domain is a phosphosugar-binding domain [] found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars possibly by binding to the end-product of the pathway.; GO: 0005529 sugar binding, 0005975 carbohydrate metabolic process; PDB: 3TBF_C 2V4M_A 2ZJ4_A 2ZJ3_A 3FKJ_A 3ODP_A 3EUA_H 1VIV_A 1M3S_B 1TZB_A ....
Probab=29.44 E-value=60 Score=23.70 Aligned_cols=30 Identities=7% Similarity=0.125 Sum_probs=23.7
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEeCCCHHHH
Q 044553 72 IHPRVVPAIKSAHALGCELRIVSDANLFFI 101 (275)
Q Consensus 72 ~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i 101 (275)
-.....+.++.++++|.+++.+|+.....+
T Consensus 65 ~~~~~~~~~~~ak~~g~~vi~iT~~~~~~l 94 (131)
T PF01380_consen 65 ETRELIELLRFAKERGAPVILITSNSESPL 94 (131)
T ss_dssp TTHHHHHHHHHHHHTTSEEEEEESSTTSHH
T ss_pred cchhhhhhhHHHHhcCCeEEEEeCCCCCch
Confidence 346678888999999999999998765444
No 302
>PF00072 Response_reg: Response regulator receiver domain; InterPro: IPR001789 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. Bipartite response regulator proteins are involved in a two-component signal transduction system in bacteria, and certain eukaryotes like protozoa, that functions to detect and respond to environmental changes []. These systems have been detected during host invasion, drug resistance, motility, phosphate uptake, osmoregulation, and nitrogen fixation, amongst others []. The two-component system consists of a histidine protein kinase environmental sensor that phosphorylates the receiver domain of a response regulator protein; phosphorylation induces a conformational change in the response regulator, which activates the effector domain, triggering the cellular response []. The domains of the two-component proteins are highly modular, but the core structures and activities are maintained. The response regulators act as phosphorylation-activated switches to affect a cellular response, usually by transcriptional regulation. Most of these proteins consist of two domains, an N-terminal response regulator receiver domain, and a variable C-terminal effector domain with DNA-binding activity. This entry represents the response regulator receiver domain, which belongs to the CheY family, and receives the signal from the sensor partner in the two-component system.; GO: 0000156 two-component response regulator activity, 0000160 two-component signal transduction system (phosphorelay), 0006355 regulation of transcription, DNA-dependent; PDB: 2QR3_A 2QXY_A 1I3C_A 1JLK_A 2PKX_A 2PL1_A 3H1F_A 3H1E_A 3GWG_A 3H1G_A ....
Probab=29.17 E-value=93 Score=21.62 Aligned_cols=39 Identities=10% Similarity=0.025 Sum_probs=26.0
Q ss_pred CCHHHHHHHHHHc--CCcEEEEeCCCHHHHHHHHHHcCCcC
Q 044553 74 PRVVPAIKSAHAL--GCELRIVSDANLFFIETILEHLGIRD 112 (275)
Q Consensus 74 pg~~e~L~~L~~~--g~~~~IvS~~~~~~i~~~l~~~gl~~ 112 (275)
-...++++.+++. +.+++++|+.........+-+.|...
T Consensus 56 ~~~~~~~~~i~~~~~~~~ii~~t~~~~~~~~~~~~~~g~~~ 96 (112)
T PF00072_consen 56 GDGLELLEQIRQINPSIPIIVVTDEDDSDEVQEALRAGADD 96 (112)
T ss_dssp SBHHHHHHHHHHHTTTSEEEEEESSTSHHHHHHHHHTTESE
T ss_pred ccccccccccccccccccEEEecCCCCHHHHHHHHHCCCCE
Confidence 4566888998875 48899999765544433334667643
No 303
>COG1834 N-Dimethylarginine dimethylaminohydrolase [Amino acid transport and metabolism]
Probab=28.82 E-value=2.5e+02 Score=24.21 Aligned_cols=65 Identities=14% Similarity=0.058 Sum_probs=39.1
Q ss_pred HHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCcc-CCCCceeecccCCCCCCCCCCCcCCCCCchH
Q 044553 77 VPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFV-DEEGRLRIFPFHDFTKCSHGCNLCPPNMCKG 155 (275)
Q Consensus 77 ~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~-~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~ 155 (275)
..+.+.++++|+.+.++. .+..+-|.|++.|..+ ...|.+..++.++ .+.+..
T Consensus 41 ~~lve~l~~~gv~V~ll~--------------~~~~~Pd~VFt~D~~~v~~~~avl~r~~~p------------~R~gE~ 94 (267)
T COG1834 41 EALVEALEKNGVEVHLLP--------------PIEGLPDQVFTRDPGLVTGEGAVLARMGAP------------ERRGEE 94 (267)
T ss_pred HHHHHHHHHCCCEEEEcC--------------cccCCCcceEeccceeEecccEEEeccCCh------------hhccCH
Confidence 367788899999999988 3345556677766433 2334444444332 122235
Q ss_pred HHHHHHHHhhhc
Q 044553 156 VVIERIQASLSK 167 (275)
Q Consensus 156 ~~l~~~~~~~~~ 167 (275)
..++.+..++++
T Consensus 95 ~~~~~~~~~lgi 106 (267)
T COG1834 95 EAIKETLESLGI 106 (267)
T ss_pred HHHHHHHHHcCC
Confidence 677777776654
No 304
>PF06901 FrpC: RTX iron-regulated protein FrpC; InterPro: IPR010692 This family consists of several RTX iron-regulated FrpC proteins which appear to be found exclusively in Neisseria meningitidis. FrpC has been shown to be related to the RTX family of bacterial cytotoxins. FrpC is found in the meningococcal outer membrane. The function of this family is unknown although it is thought to be a virulence factor [].
Probab=28.62 E-value=32 Score=27.92 Aligned_cols=14 Identities=36% Similarity=0.430 Sum_probs=11.9
Q ss_pred eEEEEEcCCcccCC
Q 044553 4 IVVIFDFDKTIIDC 17 (275)
Q Consensus 4 ~~viFD~DGTL~d~ 17 (275)
+.|-||||||++--
T Consensus 59 ~~v~~D~~GT~m~i 72 (271)
T PF06901_consen 59 HTVTFDFQGTKMVI 72 (271)
T ss_pred eeEEEeccceEEEe
Confidence 57999999999754
No 305
>KOG1154 consensus Gamma-glutamyl kinase [Amino acid transport and metabolism]
Probab=28.54 E-value=90 Score=26.43 Aligned_cols=31 Identities=23% Similarity=0.349 Sum_probs=24.3
Q ss_pred HHHHHHHHHHcCCcEEEEeCCCHHHHHHHHH
Q 044553 76 VVPAIKSAHALGCELRIVSDANLFFIETILE 106 (275)
Q Consensus 76 ~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~ 106 (275)
+.|.+..|++.|..+.+||+|.-.+-+..|+
T Consensus 37 IVEqV~~L~~~G~evilVSSGaVA~G~qrLr 67 (285)
T KOG1154|consen 37 IVEQVSELQRMGREVILVSSGAVAFGRQRLR 67 (285)
T ss_pred HHHHHHHHHhcCceEEEEecchhhhhHHHhh
Confidence 5688999999999999999986655444443
No 306
>cd07043 STAS_anti-anti-sigma_factors Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation. Anti-anti-sigma factors play an important role in the regulation of several sigma factors and their corresponding anti-sigma factors. Upon dephosphorylation they bind the anti-sigma factor and induce the release of the sigma factor from the anti-sigma factor. In a feedback mechanism the anti-anti-sigma factor can be inactivated via phosphorylation by the anti-sigma factor. Well studied examples from Bacillus subtilis are SpoIIAA (regulating sigmaF and sigmaC which play an important role in sporulation) and RsbV (regulating sigmaB involved in the general stress response). The STAS domain is also found in the C- terminal region of sulphate transporters and stressosomes.
Probab=28.49 E-value=1.2e+02 Score=20.68 Aligned_cols=36 Identities=31% Similarity=0.373 Sum_probs=25.4
Q ss_pred HHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCc
Q 044553 77 VPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCF 114 (275)
Q Consensus 77 ~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~f 114 (275)
.++.+.++++|..+.++.- + ..+..+++..|+.++|
T Consensus 60 ~~l~~~~~~~g~~v~i~~~-~-~~~~~~l~~~gl~~~~ 95 (99)
T cd07043 60 LGAYKRARAAGGRLVLVNV-S-PAVRRVLELTGLDRLF 95 (99)
T ss_pred HHHHHHHHHcCCeEEEEcC-C-HHHHHHHHHhCcceee
Confidence 3566777788877665543 3 5788899999987654
No 307
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=28.12 E-value=95 Score=23.49 Aligned_cols=38 Identities=18% Similarity=0.106 Sum_probs=17.5
Q ss_pred CCHHHHHHHHHHcCC-cEEEEeCC-CHHHHHHHHHHcCCc
Q 044553 74 PRVVPAIKSAHALGC-ELRIVSDA-NLFFIETILEHLGIR 111 (275)
Q Consensus 74 pg~~e~L~~L~~~g~-~~~IvS~~-~~~~i~~~l~~~gl~ 111 (275)
+.+.++++.|+++|. .+.|+-+| ....-...++++|++
T Consensus 68 ~~~~~~~~~L~~~g~~~i~vivGG~~~~~~~~~l~~~Gvd 107 (132)
T TIGR00640 68 TLVPALRKELDKLGRPDILVVVGGVIPPQDFDELKEMGVA 107 (132)
T ss_pred HHHHHHHHHHHhcCCCCCEEEEeCCCChHhHHHHHHCCCC
Confidence 345566666666553 22222332 222233445556654
No 308
>COG0602 NrdG Organic radical activating enzymes [Posttranslational modification, protein turnover, chaperones]
Probab=27.82 E-value=73 Score=26.32 Aligned_cols=27 Identities=11% Similarity=0.437 Sum_probs=23.8
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEeCCCH
Q 044553 72 IHPRVVPAIKSAHALGCELRIVSDANL 98 (275)
Q Consensus 72 ~~pg~~e~L~~L~~~g~~~~IvS~~~~ 98 (275)
..++..++++.|+++|+++.+=||++-
T Consensus 84 ~~~~l~~Ll~~l~~~g~~~~lETngti 110 (212)
T COG0602 84 LQPNLLELLELLKRLGFRIALETNGTI 110 (212)
T ss_pred CcccHHHHHHHHHhCCceEEecCCCCc
Confidence 356899999999999999999999864
No 309
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=27.75 E-value=71 Score=24.17 Aligned_cols=40 Identities=13% Similarity=0.121 Sum_probs=24.0
Q ss_pred CCCCHHHHHHHHHHcCC-cEEEEeCCCH-------HHHHHHHHHcCCc
Q 044553 72 IHPRVVPAIKSAHALGC-ELRIVSDANL-------FFIETILEHLGIR 111 (275)
Q Consensus 72 ~~pg~~e~L~~L~~~g~-~~~IvS~~~~-------~~i~~~l~~~gl~ 111 (275)
-.+.+.++++.|+++|. .+.|+=++.. ...+..|+++|++
T Consensus 63 ~~~~~~~~~~~l~~~gl~~v~vivGG~~~i~~~d~~~~~~~L~~~Gv~ 110 (128)
T cd02072 63 GEIDCKGLREKCDEAGLKDILLYVGGNLVVGKQDFEDVEKRFKEMGFD 110 (128)
T ss_pred CHHHHHHHHHHHHHCCCCCCeEEEECCCCCChhhhHHHHHHHHHcCCC
Confidence 34667788888888875 4433333321 2345667788864
No 310
>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2
Probab=27.68 E-value=1.1e+02 Score=21.05 Aligned_cols=33 Identities=24% Similarity=0.223 Sum_probs=27.2
Q ss_pred HHHHHHHHHHcCCc-EEEEeCCCHHHHHHHHHHc
Q 044553 76 VVPAIKSAHALGCE-LRIVSDANLFFIETILEHL 108 (275)
Q Consensus 76 ~~e~L~~L~~~g~~-~~IvS~~~~~~i~~~l~~~ 108 (275)
+.++|++....|+. ++|+.+++......+++++
T Consensus 7 L~~wl~~~~~lG~d~i~i~d~~s~D~t~~~l~~~ 40 (97)
T PF13704_consen 7 LPEWLAHHLALGVDHIYIYDDGSTDGTREILRAL 40 (97)
T ss_pred HHHHHHHHHHcCCCEEEEEECCCCccHHHHHHhC
Confidence 46788888888876 7999999888888888875
No 311
>cd05006 SIS_GmhA Phosphoheptose isomerase is a member of the SIS (Sugar ISomerase) superfamily. Phosphoheptose isomerase catalyzes the isomerization of sedoheptulose 7-phosphate into D-glycero-D-mannoheptose 7-phosphate. This is the first step of the biosynthesis of gram-negative bacteria inner core lipopolysaccharide precursor, L-glycero-D-mannoheptose (Gmh).
Probab=27.08 E-value=56 Score=25.81 Aligned_cols=28 Identities=18% Similarity=0.230 Sum_probs=23.1
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCCH
Q 044553 71 PIHPRVVPAIKSAHALGCELRIVSDANL 98 (275)
Q Consensus 71 ~~~pg~~e~L~~L~~~g~~~~IvS~~~~ 98 (275)
.-.+.+.++++.++++|.+++.+|+...
T Consensus 112 G~t~~~i~~~~~ak~~Ga~vI~IT~~~~ 139 (177)
T cd05006 112 GNSPNVLKALEAAKERGMKTIALTGRDG 139 (177)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 3457888999999999999999998754
No 312
>PRK13937 phosphoheptose isomerase; Provisional
Probab=26.59 E-value=65 Score=25.90 Aligned_cols=28 Identities=21% Similarity=0.216 Sum_probs=23.0
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEeCCCHH
Q 044553 72 IHPRVVPAIKSAHALGCELRIVSDANLF 99 (275)
Q Consensus 72 ~~pg~~e~L~~L~~~g~~~~IvS~~~~~ 99 (275)
-.+.+.+.++.++++|.+++.+|+....
T Consensus 118 ~t~~~~~~~~~ak~~g~~~I~iT~~~~s 145 (188)
T PRK13937 118 NSPNVLAALEKARELGMKTIGLTGRDGG 145 (188)
T ss_pred CcHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 4578888999999999999999986543
No 313
>PF03193 DUF258: Protein of unknown function, DUF258; InterPro: IPR004881 This entry contains Escherichia coli (strain K12) RsgA, which may play a role in 30S ribosomal subunit biogenesis. RsgA is an unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover. It is dispensible for viability, but important for overall fitness. The intrinsic GTPase activity is stimulated by the presence of 30S (160-fold increase in kcat) or 70S (96 fold increase in kcat) ribosomes []. The GTPase is inhibited by aminoglycoside antibiotics such as neomycin and paromycin [] streptomycin and spectinomycin []. This inhibition is not due to competition for binding sites on the 30S or 70S ribosome []. ; GO: 0003924 GTPase activity, 0005525 GTP binding; PDB: 2YKR_W 2YV5_A 1T9H_A 2RCN_A 4A2I_V 1U0L_B.
Probab=26.27 E-value=3.1e+02 Score=21.56 Aligned_cols=33 Identities=21% Similarity=0.123 Sum_probs=25.6
Q ss_pred HHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcC
Q 044553 77 VPAIKSAHALGCELRIVSDANLFFIETILEHLG 109 (275)
Q Consensus 77 ~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~g 109 (275)
.+.++.+++.||+++.+|+.....++.+.+.+.
T Consensus 2 ~~~~~~y~~~gy~v~~~S~~~~~g~~~l~~~l~ 34 (161)
T PF03193_consen 2 EELLEQYEKLGYPVFFISAKTGEGIEELKELLK 34 (161)
T ss_dssp HHHHHHHHHTTSEEEE-BTTTTTTHHHHHHHHT
T ss_pred HHHHHHHHHcCCcEEEEeCCCCcCHHHHHHHhc
Confidence 467788889999999999987777777777653
No 314
>TIGR02668 moaA_archaeal probable molybdenum cofactor biosynthesis protein A, archaeal. This model describes an archaeal family related, and predicted to be functionally equivalent, to molybdenum cofactor biosynthesis protein A (MoaA) of bacteria (see TIGR02666).
Probab=25.54 E-value=1.6e+02 Score=25.46 Aligned_cols=30 Identities=10% Similarity=0.283 Sum_probs=25.6
Q ss_pred cCCCCCCHHHHHHHHHHcCC-cEEEEeCCCH
Q 044553 69 RIPIHPRVVPAIKSAHALGC-ELRIVSDANL 98 (275)
Q Consensus 69 ~~~~~pg~~e~L~~L~~~g~-~~~IvS~~~~ 98 (275)
++.+.+++.++++.+++.|+ .+.|.||+..
T Consensus 66 EPll~~~l~~iv~~l~~~g~~~v~i~TNG~l 96 (302)
T TIGR02668 66 EPLLRKDLIEIIRRIKDYGIKDVSMTTNGIL 96 (302)
T ss_pred ccccccCHHHHHHHHHhCCCceEEEEcCchH
Confidence 35677899999999999998 8999999853
No 315
>PF07453 NUMOD1: NUMOD1 domain; InterPro: IPR010896 This helix-turn-helix-containing DNA-binding domain is found associated in homing nucleases [].
Probab=25.32 E-value=1.2e+02 Score=17.02 Aligned_cols=28 Identities=25% Similarity=0.313 Sum_probs=21.3
Q ss_pred ceEEEEEcCCcccCC-ccHHHHHHHhCCC
Q 044553 3 GIVVIFDFDKTIIDC-DSDNFVVDELGAT 30 (275)
Q Consensus 3 ~~~viFD~DGTL~d~-~~~~~~~~~~g~~ 30 (275)
++..++|+++..+.. .+...+.+.+|..
T Consensus 1 k~V~~yd~~~~~i~~F~Si~eAa~~l~i~ 29 (37)
T PF07453_consen 1 KPVYVYDLNTNEIKSFDSIREAARYLGIS 29 (37)
T ss_pred CeEEEEECCCCeEEEEcCHHHHHHHhCCC
Confidence 357889999998654 5677888888765
No 316
>PF02142 MGS: MGS-like domain This is a subfamily of this family; InterPro: IPR011607 This domain composes the whole protein of methylglyoxal synthetase and the domain is also found in carbamoyl phosphate synthetase (CPS) where it forms a regulatory domain that binds to the allosteric effector ornithine. The known structures in this domain show a common phosphate binding site []. ; PDB: 4A1O_A 3ZZM_A 1ZCZ_A 1M6V_C 1CS0_C 1C30_E 1C3O_G 1BXR_A 1T36_E 1A9X_A ....
Probab=25.30 E-value=63 Score=22.63 Aligned_cols=32 Identities=28% Similarity=0.463 Sum_probs=22.1
Q ss_pred CHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCc
Q 044553 75 RVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIR 111 (275)
Q Consensus 75 g~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~ 111 (275)
++.++.+.|.+.|++++ +|.++.. .|+..|+.
T Consensus 1 e~~~~a~~l~~lG~~i~-AT~gTa~----~L~~~Gi~ 32 (95)
T PF02142_consen 1 EIVPLAKRLAELGFEIY-ATEGTAK----FLKEHGIE 32 (95)
T ss_dssp THHHHHHHHHHTTSEEE-EEHHHHH----HHHHTT--
T ss_pred CHHHHHHHHHHCCCEEE-EChHHHH----HHHHcCCC
Confidence 56788999999998776 6765543 45577875
No 317
>cd05013 SIS_RpiR RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many phosphosugar isomerases and phosphosugar binding proteins. In E. coli, rpiR negatively regulates the expression of rpiB gene. Both rpiB and rpiA are ribose phosphate isomerases that catalyze the reversible reactions of ribose 5-phosphate into ribulose 5-phosphate.
Probab=25.21 E-value=70 Score=23.42 Aligned_cols=25 Identities=20% Similarity=0.248 Sum_probs=20.6
Q ss_pred CCHHHHHHHHHHcCCcEEEEeCCCH
Q 044553 74 PRVVPAIKSAHALGCELRIVSDANL 98 (275)
Q Consensus 74 pg~~e~L~~L~~~g~~~~IvS~~~~ 98 (275)
+.+.++++.++++|.+++++|+...
T Consensus 74 ~~~~~~~~~a~~~g~~iv~iT~~~~ 98 (139)
T cd05013 74 KETVEAAEIAKERGAKVIAITDSAN 98 (139)
T ss_pred HHHHHHHHHHHHcCCeEEEEcCCCC
Confidence 5577888888999999999998654
No 318
>TIGR00377 ant_ant_sig anti-anti-sigma factor. This superfamily includes small (105-125 residue) proteins related to SpoIIAA of Bacillus subtilis, an anti-anti-sigma factor. SpoIIAA can bind to and inhibit the anti-sigma F factor SpoIIAB. Also, it can be phosphorylated by SpoIIAB on a Ser residue at position 59 of the seed alignment. A similar arrangement is inferred for RsbV, an anti-anti-sigma factor for sigma B. This Ser is fairly well conserved within a motif resembling MXS[STA]G[VIL]X[VIL][VILF] among homologous known or predicted anti-anti-sigma factors. Regions similar to SpoIIAA and apparently homologous, but differing considerably near the phosphorlated Ser of SpoIIAA, appear in a single copy in several longer proteins.
Probab=25.08 E-value=1.4e+02 Score=20.95 Aligned_cols=36 Identities=19% Similarity=0.217 Sum_probs=26.0
Q ss_pred HHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcc
Q 044553 78 PAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFS 115 (275)
Q Consensus 78 e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd 115 (275)
++.+.++++|.++.++.- ...+..+++..|+...|+
T Consensus 66 ~~~~~~~~~~~~~~l~~~--~~~~~~~l~~~~l~~~~~ 101 (108)
T TIGR00377 66 GRYKQVRRVGGQLVLVSV--SPRVARLLDITGLLRIIP 101 (108)
T ss_pred HHHHHHHhcCCEEEEEeC--CHHHHHHHHHhChhheec
Confidence 456666788888776663 357888999999876543
No 319
>PF01740 STAS: STAS domain; InterPro: IPR002645 The STAS (Sulphate Transporter and AntiSigma factor antagonist) domain is found in the C-terminal region of sulphate transporters and bacterial anti-sigma factor antagonists. It has been suggested that this domain may have a general NTP binding function. The establishment of differential gene expression in sporulating Bacillus subtilis involves four protein components one of which is SpoIIAA (P10727 from SWISSPROT). The four components regulate the sporulation sigma factor F. Early in sporulation, SpoIIAA is in the phosphorylated state (SpoIIAA-P), as a result of the activity of the ATP-dependent protein kinase SpoIIAB (P10728 from SWISSPROT). The site at which this protein is a conserved serine. SpoIIAB is an anti-sigma factor that in its free form inhibits F by binding to it. Competition by SpoIIAA (the anti-anti-sigma factor) for binding to SpoIIAB releases Sigma F activity []. The STAS domain is found in the anti-sigma factor antagonist SpoIIAA.; PDB: 3T6O_B 3LKL_B 1H4Z_A 1H4Y_B 1H4X_B 3NY7_A 3OIZ_A 1T6R_A 1VC1_B 1SBO_A ....
Probab=24.79 E-value=92 Score=22.38 Aligned_cols=36 Identities=31% Similarity=0.314 Sum_probs=28.9
Q ss_pred HHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCc
Q 044553 77 VPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCF 114 (275)
Q Consensus 77 ~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~f 114 (275)
.++.+.++.+|.+++++. ....+...++..|+...+
T Consensus 70 ~~~~~~~~~~g~~~~l~~--~~~~v~~~l~~~~~~~~~ 105 (117)
T PF01740_consen 70 VDIIKELRRRGVQLVLVG--LNPDVRRILERSGLIDFI 105 (117)
T ss_dssp HHHHHHHHHTTCEEEEES--HHHHHHHHHHHTTGHHHS
T ss_pred HHHHHHHHHCCCEEEEEE--CCHHHHHHHHHcCCChhc
Confidence 467788889999998776 456788889999987665
No 320
>cd03018 PRX_AhpE_like Peroxiredoxin (PRX) family, AhpE-like subfamily; composed of proteins similar to Mycobacterium tuberculosis AhpE. AhpE is described as a 1-cys PRX because of the absence of a resolving cysteine. The structure and sequence of AhpE, however, show greater similarity to 2-cys PRXs than 1-cys PRXs. PRXs are thiol-specific antioxidant (TSA) proteins that confer a protective role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF. The first step of catalysis is the nucleophilic attack by the peroxidatic cysteine on the peroxide leading to the formation of a cysteine sulfenic acid intermediate. The absence of a resolving cysteine suggests that functional AhpE is regenerated by an external reductant. The solution behavior and crystal structure of AhpE show that it forms dimers and octamers.
Probab=24.75 E-value=1.5e+02 Score=22.22 Aligned_cols=36 Identities=19% Similarity=0.212 Sum_probs=26.8
Q ss_pred CHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCC
Q 044553 75 RVVPAIKSAHALGCELRIVSDANLFFIETILEHLGI 110 (275)
Q Consensus 75 g~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl 110 (275)
.+.++.+.+++.|+.++.+|......++..++..++
T Consensus 50 ~l~~~~~~~~~~~v~vi~vs~d~~~~~~~~~~~~~~ 85 (149)
T cd03018 50 ALRDSLELFEAAGAEVLGISVDSPFSLRAWAEENGL 85 (149)
T ss_pred HHHHHHHHHHhCCCEEEEecCCCHHHHHHHHHhcCC
Confidence 344566667777899988888877778888887775
No 321
>PF12261 T_hemolysin: Thermostable hemolysin; InterPro: IPR022050 This family of proteins is found in bacteria. Proteins in this family are typically between 200 and 228 amino acids in length. T_hemolysin is a pore-forming toxin of bacteria, able to lyse erythrocytes from a number of mammalian species.
Probab=24.70 E-value=1.8e+02 Score=23.36 Aligned_cols=34 Identities=12% Similarity=0.204 Sum_probs=27.5
Q ss_pred HHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCC
Q 044553 78 PAIKSAHALGCELRIVSDANLFFIETILEHLGIRDC 113 (275)
Q Consensus 78 e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~ 113 (275)
.+...|...|++.++.|+. ..++..+.++|+...
T Consensus 107 ~l~~~L~~~g~~w~vfTaT--~~lr~~~~rlgl~~~ 140 (179)
T PF12261_consen 107 ALAQLLAQQGFEWVVFTAT--RQLRNLFRRLGLPPT 140 (179)
T ss_pred HHHHHHHHCCCCEEEEeCC--HHHHHHHHHcCCCce
Confidence 3456667889999999986 568999999999743
No 322
>PRK00994 F420-dependent methylenetetrahydromethanopterin dehydrogenase; Provisional
Probab=24.67 E-value=1.2e+02 Score=25.60 Aligned_cols=40 Identities=20% Similarity=0.176 Sum_probs=31.8
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCc
Q 044553 72 IHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIR 111 (275)
Q Consensus 72 ~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~ 111 (275)
..||=...=+.|++.|+|++|+|.++..-.+..++.-|+.
T Consensus 72 a~PGP~~ARE~l~~~~iP~IvI~D~p~~K~~d~l~~~g~G 111 (277)
T PRK00994 72 AAPGPKKAREILKAAGIPCIVIGDAPGKKVKDAMEEQGLG 111 (277)
T ss_pred CCCCchHHHHHHHhcCCCEEEEcCCCccchHHHHHhcCCc
Confidence 3466555666668889999999999988888888888873
No 323
>COG4312 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=24.30 E-value=1.9e+02 Score=24.14 Aligned_cols=50 Identities=16% Similarity=0.074 Sum_probs=39.9
Q ss_pred CCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCcceEecCCCcc
Q 044553 73 HPRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCFSEINTNPGFV 124 (275)
Q Consensus 73 ~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~fd~i~~~~~~~ 124 (275)
.+++.-.+..|..+++.++.||-.+...+...-++.|+. |+.+-+.+..|
T Consensus 98 aD~~dGa~~HL~~~dv~lv~VsRAPl~~l~~~k~rmGW~--f~w~Ss~~s~F 147 (247)
T COG4312 98 ADHWDGAVAHLEHHDVTLVAVSRAPLEELVAYKRRMGWQ--FPWVSSTDSDF 147 (247)
T ss_pred HhhhhhhhhhHhhcCceEEEEecCcHHHHHHHHHhcCCc--ceeEeccCccc
Confidence 355667888999999999999999999999998999997 66665544433
No 324
>cd04795 SIS SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars.
Probab=24.13 E-value=76 Score=21.19 Aligned_cols=22 Identities=18% Similarity=0.354 Sum_probs=19.8
Q ss_pred CCCHHHHHHHHHHcCCcEEEEe
Q 044553 73 HPRVVPAIKSAHALGCELRIVS 94 (275)
Q Consensus 73 ~pg~~e~L~~L~~~g~~~~IvS 94 (275)
.+.+.++++.++++|.+++.+|
T Consensus 60 t~~~~~~~~~a~~~g~~ii~it 81 (87)
T cd04795 60 TEELLAALEIAKELGIPVIAIT 81 (87)
T ss_pred CHHHHHHHHHHHHcCCeEEEEe
Confidence 4778899999999999999998
No 325
>cd07041 STAS_RsbR_RsbS_like Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain of proteins related to RsbS and RsbR which are part of the "stressosome" complex that plays an important role in the regulation of the bacterial stress activated alternative sigma factor sigma-B. During stress conditions RsbS and RsbR are phosphorylated which leads to the release of RsbT, an activator of of the RsbU phosphatase, which in turn activates RsbV which leads to the release and activation of sigma factor B. RsbS is a single domain protein (STAS domain), while RsbR-like proteins have a well-conserved C-terminal STATS domain and a variable N-terminal domain. The STAS domain is also found in the C- terminal region of sulphate transporters and anti-anti-sigma factors.
Probab=23.73 E-value=1.9e+02 Score=20.44 Aligned_cols=34 Identities=18% Similarity=0.150 Sum_probs=26.0
Q ss_pred HHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcC
Q 044553 77 VPAIKSAHALGCELRIVSDANLFFIETILEHLGIRD 112 (275)
Q Consensus 77 ~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~ 112 (275)
.++.+.++.+|..++++--. ..+...++..|++.
T Consensus 63 ~~~~~~~~~~g~~l~l~g~~--~~v~~~l~~~gl~~ 96 (109)
T cd07041 63 LRLARALRLLGARTILTGIR--PEVAQTLVELGIDL 96 (109)
T ss_pred HHHHHHHHHcCCeEEEEeCC--HHHHHHHHHhCCCh
Confidence 35677778889888877643 57888999999875
No 326
>COG1852 Uncharacterized conserved protein [Function unknown]
Probab=23.67 E-value=1.4e+02 Score=24.42 Aligned_cols=32 Identities=22% Similarity=0.310 Sum_probs=26.5
Q ss_pred CHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHc
Q 044553 75 RVVPAIKSAHALGCELRIVSDANLFFIETILEHL 108 (275)
Q Consensus 75 g~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~ 108 (275)
.+-++++...+.||+++|+++|+ +++.+++..
T Consensus 121 vi~ei~e~ae~~gykvfIvpGgs--~vkkIlKe~ 152 (209)
T COG1852 121 VIGEIKEIAEKYGYKVFIVPGGS--FVKKILKEE 152 (209)
T ss_pred ehHHHHHHHHHhCcEEEEecChH--HHHHHHhhc
Confidence 35678888888899999999984 789998873
No 327
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=23.55 E-value=1.7e+02 Score=30.49 Aligned_cols=45 Identities=11% Similarity=0.155 Sum_probs=34.2
Q ss_pred HHHHHHHHH----cCCcEEEEeCCCHHHHHHHHHHcCCcC-CcceEecCC
Q 044553 77 VPAIKSAHA----LGCELRIVSDANLFFIETILEHLGIRD-CFSEINTNP 121 (275)
Q Consensus 77 ~e~L~~L~~----~g~~~~IvS~~~~~~i~~~l~~~gl~~-~fd~i~~~~ 121 (275)
.+++++++. ..+-++++|+.+...+..+++..++.. .||.+||+-
T Consensus 790 ~~~~~~~~~~~~~~~igfv~aTGR~l~~~~~~l~~~~lp~~~PD~lI~~v 839 (1050)
T TIGR02468 790 KNIFEAVRKERMEGSSGFILSTSMTISEIQSFLKSGGLNPTDFDALICNS 839 (1050)
T ss_pred HHHHHHHhccccCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCC
Confidence 445555652 237889999999999999999999963 789888654
No 328
>TIGR00441 gmhA phosphoheptose isomerase. Involved in lipopolysaccharide biosynthesis it may have a role in virulence in Haemophilus ducreyi.
Probab=23.35 E-value=69 Score=24.75 Aligned_cols=28 Identities=18% Similarity=0.102 Sum_probs=23.1
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEeCCCHH
Q 044553 72 IHPRVVPAIKSAHALGCELRIVSDANLF 99 (275)
Q Consensus 72 ~~pg~~e~L~~L~~~g~~~~IvS~~~~~ 99 (275)
-.+.+.+.++.++++|.+++.+|+....
T Consensus 91 ~t~~~~~~~~~a~~~g~~ii~iT~~~~s 118 (154)
T TIGR00441 91 NSKNVLKAIEAAKDKGMKTITLAGKDGG 118 (154)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeCCCCC
Confidence 3577888999999999999999986543
No 329
>PF08445 FR47: FR47-like protein; InterPro: IPR013653 Proteins in this entry have a conserved region similar to the C-terminal region of the Drosophila melanogaster (Fruit fly) hypothetical protein FR47 (Q9VR51 from SWISSPROT). This protein has been found to consist of two N-acyltransferase-like domains swapped with the C-terminal strands. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups; PDB: 1SQH_A 3EC4_B.
Probab=23.11 E-value=2.2e+02 Score=19.38 Aligned_cols=35 Identities=20% Similarity=0.156 Sum_probs=25.3
Q ss_pred HHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcC
Q 044553 78 PAIKSAHALGCELRIVSDANLFFIETILEHLGIRD 112 (275)
Q Consensus 78 e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~ 112 (275)
.+.+.+.++|....+...........+.+++|+..
T Consensus 45 ~l~~~~~~~g~~~~l~v~~~N~~s~~ly~klGf~~ 79 (86)
T PF08445_consen 45 ALARELLERGKTPFLYVDADNEASIRLYEKLGFRE 79 (86)
T ss_dssp HHHHHHHHTTSEEEEEEETT-HHHHHHHHHCT-EE
T ss_pred HHHHHHHhCCCcEEEEEECCCHHHHHHHHHcCCEE
Confidence 45677777888877777666677888999999853
No 330
>PF10307 DUF2410: Hypothetical protein (DUF2410); InterPro: IPR018812 This entry represents a family of proteins conserved in fungi whose function is not known. There are two characteristic sequence motifs, GGWW and TGR.
Probab=22.75 E-value=4.3e+02 Score=21.63 Aligned_cols=74 Identities=14% Similarity=0.134 Sum_probs=48.1
Q ss_pred HcCCcEEEEeCCCH----HHHHHHHHHcCCcCCcceEecCCCccCCCCceeecccCCCCCCCCCCCcCCCCCchHHHHHH
Q 044553 85 ALGCELRIVSDANL----FFIETILEHLGIRDCFSEINTNPGFVDEEGRLRIFPFHDFTKCSHGCNLCPPNMCKGVVIER 160 (275)
Q Consensus 85 ~~g~~~~IvS~~~~----~~i~~~l~~~gl~~~fd~i~~~~~~~~~~g~~~~kp~~~~~~~~~~~~~~~~~~~K~~~l~~ 160 (275)
+.+--.+++|+... ..++.+++.-|+. ||.|+- ||....+.. .=..|...|..
T Consensus 69 ~~dtltVLLTGR~e~~F~~lI~~ml~s~~L~--Fd~v~L-------------Kp~~~~~~s--------Tm~fK~~~l~~ 125 (197)
T PF10307_consen 69 DPDTLTVLLTGRRESKFSSLIERMLASKGLE--FDAVCL-------------KPENQRFSS--------TMDFKQAFLED 125 (197)
T ss_pred CCCeeEEEEeCCCchhHHHHHHHHHhcCCCC--ccEEEe-------------CcccccCcc--------ccHHHHHHHHH
Confidence 34667789998763 4577777777776 777763 332100000 11238999999
Q ss_pred HHHhhhcCCCCeEEEEcCCCCCc
Q 044553 161 IQASLSKEGNKKIIYLGDGSGDY 183 (275)
Q Consensus 161 ~~~~~~~~~~~~~i~vGDs~~Di 183 (275)
++..|.. .+++.++.|...=+
T Consensus 126 ll~~Y~~--~~eI~IYeDR~~hv 146 (197)
T PF10307_consen 126 LLHTYKN--AEEIRIYEDRPKHV 146 (197)
T ss_pred HHHhcCC--CCEEEEEcCCHHHH
Confidence 9998863 47999999976544
No 331
>cd03017 PRX_BCP Peroxiredoxin (PRX) family, Bacterioferritin comigratory protein (BCP) subfamily; composed of thioredoxin-dependent thiol peroxidases, widely expressed in pathogenic bacteria, that protect cells against toxicity from reactive oxygen species by reducing and detoxifying hydroperoxides. The protein was named BCP based on its electrophoretic mobility before its function was known. BCP shows substrate selectivity toward fatty acid hydroperoxides rather than hydrogen peroxide or alkyl hydroperoxides. BCP contains the peroxidatic cysteine but appears not to possess a resolving cysteine (some sequences, not all, contain a second cysteine but its role is still unknown). Unlike other PRXs, BCP exists as a monomer. The plant homolog of BCP is PRX Q, which is expressed only in leaves and is cellularly localized in the chloroplasts and the guard cells of stomata. Also included in this subfamily is the fungal nuclear protein, Dot5p (for disrupter of telomere silencing protein 5), w
Probab=22.48 E-value=1.8e+02 Score=21.43 Aligned_cols=36 Identities=19% Similarity=0.120 Sum_probs=26.5
Q ss_pred HHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCc
Q 044553 76 VVPAIKSAHALGCELRIVSDANLFFIETILEHLGIR 111 (275)
Q Consensus 76 ~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~ 111 (275)
+.++.+.+++.|+.++-+|......+...+++.++.
T Consensus 46 l~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~ 81 (140)
T cd03017 46 FRDLYEEFKALGAVVIGVSPDSVESHAKFAEKYGLP 81 (140)
T ss_pred HHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC
Confidence 345556666778888888887777788888877763
No 332
>cd05005 SIS_PHI Hexulose-6-phosphate isomerase (PHI). PHI is a member of the SIS (Sugar ISomerase domain) superfamily. In the ribulose monophosphate pathway of formaldehyde fixation, hexulose-6-phosphate synthase catalyzes the condensation of ribulose-5-phosphate with formadelhyde to become hexulose-6-phosphate, which is then isomerized to fructose-6-phosphate by PHI.
Probab=22.30 E-value=83 Score=24.85 Aligned_cols=28 Identities=18% Similarity=0.185 Sum_probs=23.0
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEeCCCHH
Q 044553 72 IHPRVVPAIKSAHALGCELRIVSDANLF 99 (275)
Q Consensus 72 ~~pg~~e~L~~L~~~g~~~~IvS~~~~~ 99 (275)
-.+.+.++++.++++|.+++.+|+....
T Consensus 87 ~t~~~i~~~~~ak~~g~~iI~IT~~~~s 114 (179)
T cd05005 87 ETSSVVNAAEKAKKAGAKVVLITSNPDS 114 (179)
T ss_pred CcHHHHHHHHHHHHCCCeEEEEECCCCC
Confidence 4467788899999999999999987554
No 333
>cd06589 GH31 The enzymes of glycosyl hydrolase family 31 (GH31) occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. In most cases, the pyranose moiety recognized in subsite -1 of the substrate binding site is an alpha-D-glucose, though some GH31 family members show a preference for alpha-D-xylose. Several GH31 enzymes can accommodate both glucose and xylose and different levels of discrimination between the two have been observed. Most characterized GH31 enzymes are alpha-glucosidases. In mammals, GH31 members with alpha-glucosidase activity are implicated in at least three distinct biological processes
Probab=22.05 E-value=1e+02 Score=26.23 Aligned_cols=27 Identities=22% Similarity=0.228 Sum_probs=23.6
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCC
Q 044553 71 PIHPRVVPAIKSAHALGCELRIVSDAN 97 (275)
Q Consensus 71 ~~~pg~~e~L~~L~~~g~~~~IvS~~~ 97 (275)
.-+|...++++.|+++|+++.+..+..
T Consensus 63 ~~Fpdp~~~i~~l~~~g~~~~~~~~P~ 89 (265)
T cd06589 63 GKFPNPKSMIDELHDNGVKLVLWIDPY 89 (265)
T ss_pred hhCCCHHHHHHHHHHCCCEEEEEeChh
Confidence 458999999999999999999888753
No 334
>cd08185 Fe-ADH1 Iron-containing alcohol dehydrogenases-like. Iron-containing alcohol dehydrogenases-like (ADH). Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron ions. The protein structure represents a dehydroquinate synthase fold and is a member of the iron-containing alcohol dehydrogenase-like family. They are distinct from other alcohol dehydrogenases which contain different protein domains. Proteins of this family have not been characterized. Their specific function is unknown. They are present in bacteria and archaea.
Probab=21.92 E-value=4.7e+02 Score=23.51 Aligned_cols=30 Identities=27% Similarity=0.262 Sum_probs=17.3
Q ss_pred HHHHHHHHhhhcCCCCeEEEEcCC-CCCccc
Q 044553 156 VVIERIQASLSKEGNKKIIYLGDG-SGDYCP 185 (275)
Q Consensus 156 ~~l~~~~~~~~~~~~~~~i~vGDs-~~Di~~ 185 (275)
+.+++........+++-++.||=+ .-|...
T Consensus 70 ~~v~~~~~~~~~~~~D~IiavGGGS~iD~aK 100 (380)
T cd08185 70 TTVMEGAALAREEGCDFVVGLGGGSSMDTAK 100 (380)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCccHHHHHH
Confidence 444444433333346788889986 557743
No 335
>cd06537 CIDE_N_B CIDE_N domain of CIDE-B proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45 and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=21.89 E-value=57 Score=22.52 Aligned_cols=17 Identities=18% Similarity=0.401 Sum_probs=13.8
Q ss_pred eEEEEEcCCcccCCccH
Q 044553 4 IVVIFDFDKTIIDCDSD 20 (275)
Q Consensus 4 ~~viFD~DGTL~d~~~~ 20 (275)
-.++.+-|||.+|++.+
T Consensus 40 ~~lvLeeDGT~Vd~Eey 56 (81)
T cd06537 40 LTLVLEEDGTAVDSEDF 56 (81)
T ss_pred eEEEEecCCCEEccHHH
Confidence 46889999999988653
No 336
>cd06539 CIDE_N_A CIDE_N domain of CIDE-A proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45, and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, the CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=21.85 E-value=57 Score=22.33 Aligned_cols=16 Identities=19% Similarity=0.588 Sum_probs=13.3
Q ss_pred eEEEEEcCCcccCCcc
Q 044553 4 IVVIFDFDKTIIDCDS 19 (275)
Q Consensus 4 ~~viFD~DGTL~d~~~ 19 (275)
-.++.+-|||.+|++.
T Consensus 41 ~~lvL~eDGT~Vd~Ee 56 (78)
T cd06539 41 VTLVLEEDGTVVDTEE 56 (78)
T ss_pred cEEEEeCCCCEEccHH
Confidence 4678899999998864
No 337
>PF08620 RPAP1_C: RPAP1-like, C-terminal; InterPro: IPR013929 Inhibition of RNA polymerase II-associated protein 1 (RPAP1) synthesis in Saccharomyces cerevisiae (Baker's yeast) results in changes in global gene expression that are similar to those caused by the loss of the RNAPII subunit Rpb11 []. This entry represents the C-terminal region that contains the motif GLHHH. This region is conserved from yeast to humans.
Probab=21.81 E-value=33 Score=23.22 Aligned_cols=9 Identities=44% Similarity=0.962 Sum_probs=8.2
Q ss_pred EEEcCCccc
Q 044553 7 IFDFDKTII 15 (275)
Q Consensus 7 iFD~DGTL~ 15 (275)
=|||+|.++
T Consensus 4 RFdf~G~l~ 12 (73)
T PF08620_consen 4 RFDFDGNLL 12 (73)
T ss_pred cccCCCCEe
Confidence 499999999
No 338
>cd04906 ACT_ThrD-I_1 First of two tandem C-terminal ACT domains of threonine dehydratase I (ThrD-I; L-threonine hydrolyase). This CD includes the first of two tandem C-terminal ACT domains of threonine dehydratase I (ThrD-I; L-threonine hydrolyase) which catalyzes the committed step in branched chain amino acid biosynthesis in plants and microorganisms, the pyridoxal 5'-phosphate (PLP)-dependent dehydration/deamination of L-threonine (or L-serine) to 2-ketobutyrate (or pyruvate). ThrD-I is a cooperative, feedback-regulated (isoleucine and valine) allosteric enzyme that forms a tetramer and contains four pyridoxal phosphate moieties. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=21.31 E-value=1.1e+02 Score=20.85 Aligned_cols=23 Identities=17% Similarity=0.283 Sum_probs=19.0
Q ss_pred CHHHHHHHHHHcCCcEEEEeCCC
Q 044553 75 RVVPAIKSAHALGCELRIVSDAN 97 (275)
Q Consensus 75 g~~e~L~~L~~~g~~~~IvS~~~ 97 (275)
...++++.|++.||++.++|++.
T Consensus 54 ~~~~i~~~L~~~G~~~~~~~~~~ 76 (85)
T cd04906 54 ELAELLEDLKSAGYEVVDLSDDE 76 (85)
T ss_pred HHHHHHHHHHHCCCCeEECCCCH
Confidence 37788999999999998888764
No 339
>TIGR03556 photolyase_8HDF deoxyribodipyrimidine photo-lyase, 8-HDF type. This model describes a narrow clade of cyanobacterial deoxyribodipyrimidine photo-lyase. This group, in contrast to several closely related proteins, uses a chromophore that, in other lineages is modified further to become coenzyme F420. This chromophore is called 8-HDF in most articles on the DNA photolyase and FO in most literature on coenzyme F420.
Probab=21.28 E-value=90 Score=29.19 Aligned_cols=38 Identities=16% Similarity=0.253 Sum_probs=25.7
Q ss_pred CCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCc
Q 044553 74 PRVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIR 111 (275)
Q Consensus 74 pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~ 111 (275)
.++.++=+.|++.|+++.+..+.+...+..+++.++++
T Consensus 55 esL~~L~~~L~~~G~~L~v~~G~p~~vl~~l~~~~~~~ 92 (471)
T TIGR03556 55 GCLQELQQRYQQAGSQLLILQGDPVQLIPQLAQQLGAK 92 (471)
T ss_pred HHHHHHHHHHHHCCCCeEEEECCHHHHHHHHHHHcCCC
Confidence 44455556666777777777777777777777766654
No 340
>smart00266 CAD Domains present in proteins implicated in post-mortem DNA fragmentation.
Probab=21.10 E-value=55 Score=22.18 Aligned_cols=16 Identities=25% Similarity=0.551 Sum_probs=13.3
Q ss_pred eEEEEEcCCcccCCcc
Q 044553 4 IVVIFDFDKTIIDCDS 19 (275)
Q Consensus 4 ~~viFD~DGTL~d~~~ 19 (275)
-.++.+-|||.++++.
T Consensus 39 ~~l~L~eDGT~VddEe 54 (74)
T smart00266 39 VTLVLEEDGTIVDDEE 54 (74)
T ss_pred cEEEEecCCcEEccHH
Confidence 4678999999998864
No 341
>PF03020 LEM: LEM domain; InterPro: IPR003887 The LEM domain is found in nuclear membrane-associated proteins, including lamino-associated polypeptide 2 and emerin []. Defects in the emerin gene are a cause of Emery-Dreifuss muscular dystrophy, an X-linked disorder characterised by early contractures, muscle wasting, weakness and cardiomyopathy.; GO: 0005635 nuclear envelope; PDB: 2ODG_C 2ODC_I 1JEI_A 1H9F_A 1GJJ_A.
Probab=20.97 E-value=15 Score=22.02 Aligned_cols=31 Identities=13% Similarity=0.035 Sum_probs=17.7
Q ss_pred HHHHHHHHcCCcEEEEeCCCHHHHHHHHHHc
Q 044553 78 PAIKSAHALGCELRIVSDANLFFIETILEHL 108 (275)
Q Consensus 78 e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~ 108 (275)
|+.+.|++.|+..+-||.+.+..-...|.++
T Consensus 10 ELr~~L~~~G~~~GPIt~tTR~vY~kkL~kl 40 (43)
T PF03020_consen 10 ELREELREYGEPPGPITPTTRKVYEKKLAKL 40 (43)
T ss_dssp CCHHCCCCCT-S-----CCCHHHHHHHCHHH
T ss_pred HHHHHHHHcCCCCCCCCcccHHHHHHHHHHH
Confidence 3556778889999999998887766665543
No 342
>COG1911 RPL30 Ribosomal protein L30E [Translation, ribosomal structure and biogenesis]
Probab=20.77 E-value=3.2e+02 Score=19.57 Aligned_cols=46 Identities=15% Similarity=-0.001 Sum_probs=35.1
Q ss_pred HHHHHhcCCCCCCHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHc
Q 044553 63 IVEVLKRIPIHPRVVPAIKSAHALGCELRIVSDANLFFIETILEHL 108 (275)
Q Consensus 63 ~~~~~~~~~~~pg~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~ 108 (275)
+...++.-...-|..++++.++.-.-+++|+.++.....+..++.+
T Consensus 11 L~~avkTGkvilG~k~tiK~lk~gkaKliiiAsN~P~~~k~~ieyY 56 (100)
T COG1911 11 LKLAVKTGKVILGSKRTIKSLKLGKAKLIIIASNCPKELKEDIEYY 56 (100)
T ss_pred HHHHHhcCCEEEehHHHHHHHHcCCCcEEEEecCCCHHHHHHHHHH
Confidence 3444566667789999999999877788777776667788888776
No 343
>PRK00414 gmhA phosphoheptose isomerase; Reviewed
Probab=20.57 E-value=1e+02 Score=24.93 Aligned_cols=28 Identities=18% Similarity=0.176 Sum_probs=22.3
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEeCCCHH
Q 044553 72 IHPRVVPAIKSAHALGCELRIVSDANLF 99 (275)
Q Consensus 72 ~~pg~~e~L~~L~~~g~~~~IvS~~~~~ 99 (275)
-.+.+.+.++.++++|.+++.+|+....
T Consensus 123 ~t~~~i~~~~~ak~~g~~iI~iT~~~~s 150 (192)
T PRK00414 123 NSGNIIKAIEAARAKGMKVITLTGKDGG 150 (192)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 3477888888889999999999986543
No 344
>COG1366 SpoIIAA Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Signal transduction mechanisms]
Probab=20.39 E-value=2.1e+02 Score=20.76 Aligned_cols=35 Identities=31% Similarity=0.358 Sum_probs=27.4
Q ss_pred HHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcCCc
Q 044553 78 PAIKSAHALGCELRIVSDANLFFIETILEHLGIRDCF 114 (275)
Q Consensus 78 e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~~f 114 (275)
.+++.++..|..+.+++-. +.+...+...|++..|
T Consensus 67 ~~~~~~~~~g~~~~l~~i~--p~v~~~~~~~gl~~~~ 101 (117)
T COG1366 67 ALLKSARLRGVELVLVGIQ--PEVARTLELTGLDKSF 101 (117)
T ss_pred HHHHHHHhcCCeEEEEeCC--HHHHHHHHHhCchhhc
Confidence 4667778889888877754 5788899999998776
No 345
>PF00696 AA_kinase: Amino acid kinase family Match to Glutamate-5-kinases, C-terminal end of the alignment Match to Aspartate kinases; InterPro: IPR001048 This entry contains proteins with various specificities and includes the aspartate, glutamate and uridylate kinase families. In prokaryotes and plants the synthesis of the essential amino acids lysine and threonine is predominantly regulated by feed-back inhibition of aspartate kinase (AK) and dihydrodipicolinate synthase (DHPS). In Escherichia coli, thrA, metLM, and lysC encode aspartokinase isozymes that show feedback inhibition by threonine, methionine, and lysine, respectively []. The lysine-sensitive isoenzyme of aspartate kinase from spinach leaves has a subunit composition of 4 large and 4 small subunits []. In plants although the control of carbon fixation and nitrogen assimilation has been studied in detail, relatively little is known about the regulation of carbon and nitrogen flow into amino acids. The metabolic regulation of expression of an Arabidopsis thaliana aspartate kinase/homoserine dehydrogenase (AK/HSD) gene, which encodes two linked key enzymes in the biosynthetic pathway of aspartate family amino acids has been studied []. The conversion of aspartate into either the storage amino acid asparagine or aspartate family amino acids may be subject to a coordinated, reciprocal metabolic control, and this biochemical branch point is a part of a larger, coordinated regulatory mechanism of nitrogen and carbon storage and utilization.; GO: 0008652 cellular amino acid biosynthetic process; PDB: 2X2W_B 2WXB_B 1B7B_C 2J4L_F 2J4K_E 2J4J_F 2OGX_B 3QUO_A 3D40_A 3D41_A ....
Probab=20.15 E-value=2e+02 Score=23.68 Aligned_cols=37 Identities=24% Similarity=0.420 Sum_probs=27.9
Q ss_pred CHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHcCCcC
Q 044553 75 RVVPAIKSAHALGCELRIVSDANLFFIETILEHLGIRD 112 (275)
Q Consensus 75 g~~e~L~~L~~~g~~~~IvS~~~~~~i~~~l~~~gl~~ 112 (275)
.+.+.|+.+.+.|++++||+++. ..+...++.+|+..
T Consensus 21 ~~~~~i~~l~~~g~~vvvV~g~g-~~~~~~~~~~~~~~ 57 (242)
T PF00696_consen 21 ELADDIALLSQLGIKVVVVHGGG-SFTDELLEKYGIEP 57 (242)
T ss_dssp HHHHHHHHHHHTTSEEEEEESSH-HHHHHHHHHCTHTT
T ss_pred HHHHHHHHHHhCCCeEEEEECCh-hhcCchHHhccCCc
Confidence 34466677778899999999865 57888888877654
No 346
>PRK01045 ispH 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed
Probab=20.11 E-value=6e+02 Score=22.29 Aligned_cols=23 Identities=4% Similarity=-0.049 Sum_probs=14.2
Q ss_pred cEEEEeCCCHHHHHHHHHHcCCc
Q 044553 89 ELRIVSDANLFFIETILEHLGIR 111 (275)
Q Consensus 89 ~~~IvS~~~~~~i~~~l~~~gl~ 111 (275)
.+.|-+-|-...+...++..|+.
T Consensus 68 ~ViirAHGv~~~~~~~~~~~g~~ 90 (298)
T PRK01045 68 IVIFSAHGVSPAVREEAKERGLT 90 (298)
T ss_pred EEEEeCCCCCHHHHHHHHHCCCe
Confidence 34444456666777777777763
Done!