Your job contains 1 sequence.
>044557
QHNLSVVDHHCLTTLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSN
NNIVAVGKGAVKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLGDRAIK
LLMPKNHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESI
TNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSC
DGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRI
WRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQISFPL
VR
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 044557
(362 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2170061 - symbol:AT5G50120 "AT5G50120" species... 1136 3.1e-115 1
TAIR|locus:2032452 - symbol:AT1G24130 "AT1G24130" species... 1094 8.7e-111 1
TAIR|locus:2024031 - symbol:AT1G24530 "AT1G24530" species... 811 8.5e-81 1
TAIR|locus:2066276 - symbol:AT2G26490 "AT2G26490" species... 721 2.9e-71 1
TAIR|locus:2010157 - symbol:AT1G49450 "AT1G49450" species... 679 8.2e-67 1
TAIR|locus:2085929 - symbol:AT3G18950 "AT3G18950" species... 661 6.7e-65 1
TAIR|locus:2116194 - symbol:AT4G34380 "AT4G34380" species... 650 9.7e-64 1
TAIR|locus:2074825 - symbol:AT3G50390 "AT3G50390" species... 648 1.6e-63 1
TAIR|locus:2015423 - symbol:AT1G47610 "AT1G47610" species... 645 3.3e-63 1
TAIR|locus:2083710 - symbol:AT3G51930 "AT3G51930" species... 616 3.9e-60 1
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 243 1.3e-18 1
DICTYBASE|DDB_G0289115 - symbol:mhkB "myosin heavy chain ... 244 3.8e-18 1
UNIPROTKB|Q9NVX2 - symbol:NLE1 "Notchless protein homolog... 196 4.2e-18 2
MGI|MGI:2429770 - symbol:Nle1 "notchless homolog 1 (Droso... 193 9.6e-18 2
RGD|1308301 - symbol:Nle1 "notchless homolog 1 (Drosophil... 193 9.8e-18 2
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 242 1.7e-17 1
UNIPROTKB|Q58D20 - symbol:NLE1 "Notchless protein homolog... 189 2.9e-17 2
ZFIN|ZDB-GENE-030131-6305 - symbol:fbxw11a "F-box and WD-... 234 3.3e-17 1
POMBASE|SPAC57A10.05c - symbol:pof1 "F-box/WD repeat prot... 235 3.4e-17 1
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 241 3.5e-17 1
UNIPROTKB|F1P5E8 - symbol:FBXW11 "Uncharacterized protein... 233 4.1e-17 1
RGD|1309121 - symbol:Fbxw11 "F-box and WD repeat domain c... 232 4.8e-17 1
UNIPROTKB|I3LTI2 - symbol:NLE1 "Uncharacterized protein" ... 187 5.0e-17 2
UNIPROTKB|J9P544 - symbol:FBXW11 "Uncharacterized protein... 232 5.3e-17 1
UNIPROTKB|B4DH70 - symbol:FBXW11 "cDNA FLJ54601, highly s... 232 5.3e-17 1
UNIPROTKB|F1M373 - symbol:Fbxw11 "Protein Fbxw11" species... 232 5.7e-17 1
ZFIN|ZDB-GENE-040426-2903 - symbol:fbxw11b "F-box and WD-... 232 5.7e-17 1
UNIPROTKB|E2RTE4 - symbol:FBXW11 "Uncharacterized protein... 232 5.8e-17 1
UNIPROTKB|F1MLG0 - symbol:FBXW11 "Uncharacterized protein... 232 5.8e-17 1
MGI|MGI:2144023 - symbol:Fbxw11 "F-box and WD-40 domain p... 232 6.1e-17 1
UNIPROTKB|F1PBF1 - symbol:FBXW11 "Uncharacterized protein... 232 6.1e-17 1
UNIPROTKB|Q9UKB1 - symbol:FBXW11 "F-box/WD repeat-contain... 232 6.1e-17 1
UNIPROTKB|Q68DS0 - symbol:DKFZp781N011 "Putative uncharac... 232 6.7e-17 1
UNIPROTKB|Q9Y297 - symbol:BTRC "F-box/WD repeat-containin... 232 7.8e-17 1
UNIPROTKB|F1NYG1 - symbol:BTRC "Uncharacterized protein" ... 231 1.0e-16 1
CGD|CAL0005939 - symbol:TUP1 species:5476 "Candida albica... 229 1.2e-16 1
UNIPROTKB|P0CY34 - symbol:TUP1 "Transcriptional repressor... 229 1.2e-16 1
WB|WBGene00003009 - symbol:lin-23 species:6239 "Caenorhab... 231 1.2e-16 1
UNIPROTKB|Q09990 - symbol:lin-23 "F-box/WD repeat-contain... 231 1.2e-16 1
UNIPROTKB|F1PUU2 - symbol:NLE1 "Uncharacterized protein" ... 182 1.3e-16 2
UNIPROTKB|F1S8U2 - symbol:BTRC "Uncharacterized protein" ... 227 2.1e-16 1
SGD|S000002675 - symbol:CIA1 "Component of cytosolic iron... 220 2.1e-16 1
RGD|1359721 - symbol:Btrc "beta-transducin repeat contain... 226 2.7e-16 1
UNIPROTKB|F1MVN1 - symbol:BTRC "Uncharacterized protein" ... 227 2.7e-16 1
UNIPROTKB|E2RDC4 - symbol:BTRC "Uncharacterized protein" ... 227 3.1e-16 1
MGI|MGI:1338871 - symbol:Btrc "beta-transducin repeat con... 226 4.1e-16 1
UNIPROTKB|F1LMH8 - symbol:Btrc "Protein Btrc" species:101... 226 4.1e-16 1
UNIPROTKB|E1BWK2 - symbol:FBXW11 "Uncharacterized protein... 224 5.2e-16 1
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 218 8.3e-16 1
TAIR|locus:2148965 - symbol:TOZ "AT5G16750" species:3702 ... 200 1.6e-15 2
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 210 3.0e-15 1
DICTYBASE|DDB_G0269728 - symbol:ciao1 "putative cytosolic... 211 3.3e-15 1
UNIPROTKB|F1NEH1 - symbol:TRAF7 "Uncharacterized protein"... 218 4.3e-15 1
ZFIN|ZDB-GENE-070112-2212 - symbol:traf7 "TNF receptor-as... 217 5.2e-15 1
FB|FBgn0023423 - symbol:slmb "supernumerary limbs" specie... 215 5.6e-15 1
ZFIN|ZDB-GENE-050417-160 - symbol:wdr38 "WD repeat domain... 194 6.1e-15 1
UNIPROTKB|O76071 - symbol:CIAO1 "Probable cytosolic iron-... 209 6.8e-15 1
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 212 7.1e-15 1
UNIPROTKB|F1NII4 - symbol:NLE1 "Uncharacterized protein" ... 213 9.1e-15 1
UNIPROTKB|Q5EA56 - symbol:TRAF7 "Uncharacterized protein"... 215 9.6e-15 1
UNIPROTKB|B5X212 - symbol:ciao1b "Probable cytosolic iron... 207 1.1e-14 1
CGD|CAL0000293 - symbol:UTP13 species:5476 "Candida albic... 186 1.3e-14 2
UNIPROTKB|Q5AGB1 - symbol:CaO19.11744 "Putative uncharact... 186 1.3e-14 2
UNIPROTKB|Q6Q0C0 - symbol:TRAF7 "E3 ubiquitin-protein lig... 212 2.1e-14 1
MGI|MGI:3042141 - symbol:Traf7 "TNF receptor-associated f... 211 2.2e-14 1
RGD|1559653 - symbol:Traf7 "TNF receptor-associated facto... 211 2.5e-14 1
POMBASE|SPCC16A11.02 - symbol:utp13 "U3 snoRNP-associated... 212 2.7e-14 1
UNIPROTKB|E2QXW8 - symbol:TRAF7 "Uncharacterized protein"... 211 2.8e-14 1
UNIPROTKB|I3LMJ3 - symbol:LOC100738291 "Uncharacterized p... 209 2.8e-14 1
WB|WBGene00004767 - symbol:sel-10 species:6239 "Caenorhab... 210 2.9e-14 1
UNIPROTKB|Q93794 - symbol:sel-10 "F-box/WD repeat-contain... 210 2.9e-14 1
FB|FBgn0021874 - symbol:Nle "Notchless" species:7227 "Dro... 177 2.9e-14 2
WB|WBGene00006474 - symbol:wdr-5.1 species:6239 "Caenorha... 204 4.5e-14 1
UNIPROTKB|Q17963 - symbol:tag-125 "WD repeat-containing p... 204 4.5e-14 1
UNIPROTKB|F1RFA9 - symbol:TRAF7 "Uncharacterized protein"... 209 4.7e-14 1
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 203 5.0e-14 1
MGI|MGI:1346998 - symbol:Ciao1 "cytosolic iron-sulfur pro... 201 6.5e-14 1
RGD|1307285 - symbol:Ciao1 "cytosolic iron-sulfur protein... 201 6.5e-14 1
UNIPROTKB|F1P0J6 - symbol:TRAF7 "Uncharacterized protein"... 207 7.9e-14 1
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 203 8.1e-14 1
UNIPROTKB|F1NM37 - symbol:TBL3 "Uncharacterized protein" ... 177 9.3e-14 2
UNIPROTKB|Q28DW0 - symbol:ciao1 "Probable cytosolic iron-... 199 1.0e-13 1
ZFIN|ZDB-GENE-050419-255 - symbol:daw1 "dynein assembly f... 201 1.4e-13 1
RGD|1561436 - symbol:LOC363267 "hypothetical protein LOC3... 201 1.4e-13 1
FB|FBgn0028496 - symbol:CG30116 species:7227 "Drosophila ... 210 1.6e-13 1
FB|FBgn0041171 - symbol:ago "archipelago" species:7227 "D... 208 1.7e-13 1
MGI|MGI:1923896 - symbol:Wdr38 "WD repeat domain 38" spec... 195 1.8e-13 1
UNIPROTKB|E1BM03 - symbol:WDR3 "Uncharacterized protein" ... 167 1.9e-13 2
UNIPROTKB|B5X9P2 - symbol:ciao1a "Probable cytosolic iron... 196 2.3e-13 1
POMBASE|SPBC1289.11 - symbol:spf38 "splicing factor Spf38... 196 2.7e-13 1
DICTYBASE|DDB_G0291231 - symbol:mhkA "myosin heavy chain ... 205 3.0e-13 1
POMBASE|SPAC630.14c - symbol:tup12 "transcriptional corep... 201 3.2e-13 1
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 195 3.3e-13 1
SGD|S000004951 - symbol:LST8 "Protein required for the tr... 192 4.2e-13 1
ASPGD|ASPL0000038644 - symbol:AN10391 species:162425 "Eme... 199 5.1e-13 1
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 192 6.8e-13 1
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 192 7.4e-13 1
UNIPROTKB|F1S845 - symbol:TAF5 "Uncharacterized protein" ... 183 7.8e-13 2
CGD|CAL0002120 - symbol:orf19.3862 species:5476 "Candida ... 188 8.1e-13 2
UNIPROTKB|Q9UNX4 - symbol:WDR3 "WD repeat-containing prot... 163 8.2e-13 2
WARNING: Descriptions of 827 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2170061 [details] [associations]
symbol:AT5G50120 "AT5G50120" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0009733 "response to auxin stimulus" evidence=RCA]
[GO:0009741 "response to brassinosteroid stimulus" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AB026650
HOGENOM:HOG000236376 IPI:IPI00531222 RefSeq:NP_199823.1
UniGene:At.9028 ProteinModelPortal:Q9FG99 SMR:Q9FG99 STRING:Q9FG99
EnsemblPlants:AT5G50120.1 GeneID:835077 KEGG:ath:AT5G50120
TAIR:At5g50120 InParanoid:Q9FG99 OMA:RTLKIWR PhylomeDB:Q9FG99
ProtClustDB:CLSN2916602 Genevestigator:Q9FG99 Uniprot:Q9FG99
Length = 388
Score = 1136 (405.0 bits), Expect = 3.1e-115, P = 3.1e-115
Identities = 225/365 (61%), Positives = 280/365 (76%)
Query: 9 HHCLTTLKGHN-SYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAV- 66
H C+ TL H SY+SSL LAGK LYTGS+D VR W+ NT E E SN +++
Sbjct: 27 HQCIATLVCHTASYISSLTLAGKRLYTGSNDGVVRLWNANTL--ETLAEASSNGDVITGE 84
Query: 67 --GKGAVKSLVVLADKLFSAHQDHKIRVWKINNQ-EPD--HQKYTRLATLPTLGDRAIKL 121
G GAVKSLV+LADKLF+AHQDHKIRVWKIN+ E D +KY LAT+PT+ DR K
Sbjct: 85 RGGGGAVKSLVILADKLFTAHQDHKIRVWKINDVVEEDVGGKKYMHLATMPTISDRFAKC 144
Query: 122 LMPKNHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESIT 181
LMPKN V+IRRHK +WVHHVDAVS LAL++D TLLYSVSWDRT+KIWRT+DFKCLES T
Sbjct: 145 LMPKNQVEIRRHKKASWVHHVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESFT 204
Query: 182 NAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGN------KKHSLVDVLERHNSGINA 235
NAHDDAINAVALS++GD+YTGS+D++IKVWR++ +KHSLV +L HNSGINA
Sbjct: 205 NAHDDAINAVALSENGDIYTGSSDQRIKVWRKNINEENVKKKRKHSLVAILSEHNSGINA 264
Query: 236 LALS-CDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSA 294
LALS +GS+L+SG D SI+VWE++ D G+I+VVG LRGHT+S+LC+AVVSD++CSGSA
Sbjct: 265 LALSGTNGSLLHSGGSDGSILVWERD-DGGDIVVVGMLRGHTESVLCLAVVSDILCSGSA 323
Query: 295 DKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVW 354
DKT+R+W+ ++Y+CLA+LEGH GPVKCL A + R + + SY + SG LD +KVW
Sbjct: 324 DKTVRLWKCSAKDYSCLAMLEGHLGPVKCLTGAFRDSR-KADEASYHIYSGGLDSQVKVW 382
Query: 355 QISFP 359
Q+ P
Sbjct: 383 QVLVP 387
>TAIR|locus:2032452 [details] [associations]
symbol:AT1G24130 "AT1G24130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AC002396 HOGENOM:HOG000236376 IPI:IPI00530155 PIR:T00642
RefSeq:NP_173823.1 UniGene:At.65928 ProteinModelPortal:O48679
SMR:O48679 STRING:O48679 PRIDE:O48679 EnsemblPlants:AT1G24130.1
GeneID:839025 KEGG:ath:AT1G24130 TAIR:At1g24130 InParanoid:O48679
OMA:GFRCVES PhylomeDB:O48679 ProtClustDB:CLSN2914172
Genevestigator:O48679 Uniprot:O48679
Length = 415
Score = 1094 (390.2 bits), Expect = 8.7e-111, P = 8.7e-111
Identities = 220/365 (60%), Positives = 273/365 (74%)
Query: 1 QHNLSVVDHHCLTTLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNT-FSSELDQEFLS 59
QH S VDHHCL TLK +SYVSSLA++ K LYTGSS++E+R W FS E
Sbjct: 51 QHQSSSVDHHCLATLKDKSSYVSSLAVSDKLLYTGSSNSEIRVWPREPPFSPEYSTG--D 108
Query: 60 NNNIVAVGKGAVKSLVVLADKLFSAHQDHKIRVWKINNQEPDH-QKYTRLATLPTLGDRA 118
+ N+VA G G VKSLV+L DKL SAHQDHKIRVWKI ++ QKY +ATLPT+ DR
Sbjct: 109 DRNVVANGNGGVKSLVILGDKLISAHQDHKIRVWKIIDESNRRGQKYKCVATLPTMNDRF 168
Query: 119 IKLLMPKNHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLE 178
L K++V++RRHK CTWVHHVDAVS+LAL++D +LLYS SWDR+ KIWRTSDFKCL+
Sbjct: 169 KTLFSSKSYVEVRRHKKCTWVHHVDAVSSLALSQDGSLLYSASWDRSFKIWRTSDFKCLD 228
Query: 179 SITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALAL 238
SI AHDDAINA+ +S DG VYTGSADKKIKVW + +KKHSLV L +H S +NALA+
Sbjct: 229 SIEKAHDDAINAIVVSKDGFVYTGSADKKIKVWNKK--DKKHSLVATLTKHLSAVNALAI 286
Query: 239 SCDGSVLYSGACDRSIIVWEK----EEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSA 294
S DG VLYSGACDRSI+VWE+ ++++ ++ VVGALRGH K+I+C+AV SDLV SGSA
Sbjct: 287 SEDGKVLYSGACDRSILVWERLINGDDEELHMSVVGALRGHRKAIMCLAVASDLVLSGSA 346
Query: 295 DKTIRIWR-GI--DRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDI 351
DK++R+WR G+ Y+CLAVLEGH PVK LA ++ +D +SD S +V SGSLD +
Sbjct: 347 DKSLRVWRRGLMEKEGYSCLAVLEGHTKPVKSLAVSV-SDSDSNSDYSCMVYSGSLDLSL 405
Query: 352 KVWQI 356
KVW +
Sbjct: 406 KVWNL 410
>TAIR|locus:2024031 [details] [associations]
symbol:AT1G24530 "AT1G24530" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0006857 "oligopeptide transport"
evidence=RCA] [GO:0009741 "response to brassinosteroid stimulus"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AC000103 HSSP:P16649
HOGENOM:HOG000236376 EMBL:AY045973 EMBL:AY079324 IPI:IPI00540711
RefSeq:NP_564219.1 UniGene:At.15901 ProteinModelPortal:Q9FYL1
SMR:Q9FYL1 STRING:Q9FYL1 PaxDb:Q9FYL1 EnsemblPlants:AT1G24530.1
GeneID:839068 KEGG:ath:AT1G24530 TAIR:At1g24530 InParanoid:Q9FYL1
OMA:REDSANH PhylomeDB:Q9FYL1 ProtClustDB:CLSN2687940
ArrayExpress:Q9FYL1 Genevestigator:Q9FYL1 Uniprot:Q9FYL1
Length = 418
Score = 811 (290.5 bits), Expect = 8.5e-81, P = 8.5e-81
Identities = 172/357 (48%), Positives = 238/357 (66%)
Query: 5 SVVDHHCLTT---LKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNN 61
+V H +T+ L+ + V+ LA+ G +L+ S +EV +D + LD F +
Sbjct: 66 TVTVSHSVTSSFKLRERSLPVTCLAVNGGYLFAVSG-HEVSIYD-RDMCAHLDT-FNGQD 122
Query: 62 NIVAVGKGAVKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLGDRAIKL 121
G VKS+ +K+F+AHQD KI VWK+ + Y +L TLPTL DR +
Sbjct: 123 PF----SGTVKSVGFSGEKIFTAHQDGKIGVWKLTAKSG----YKQLTTLPTLNDRLRRF 174
Query: 122 LMPKNHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESIT 181
+PKN+VQ+RRHK W+ H DAV+ALA++ + +YSVSWD+T+KIWR SD +C ESI
Sbjct: 175 ALPKNYVQVRRHKKRLWIEHADAVTALAVS--DGFIYSVSWDKTLKIWRASDLRCKESI- 231
Query: 182 NAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCD 241
AHDDA+NA+A+S +G VYTGSAD++I+VW + G K+H+LV LE+H S +NALAL+ D
Sbjct: 232 KAHDDAVNAIAVSTNGTVYTGSADRRIRVWAKPTGEKRHTLVATLEKHKSAVNALALNDD 291
Query: 242 GSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIW 301
GSVL+SG+CDRSI+VWE+E+ + V GALRGH K+IL + VSDL+ SGSAD+T+RIW
Sbjct: 292 GSVLFSGSCDRSILVWEREDTSNYMAVRGALRGHDKAILSLFNVSDLLLSGSADRTVRIW 351
Query: 302 R-GIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQIS 357
R G D +Y+CL VL GH PVK LAA + + D + SGSLD ++K W++S
Sbjct: 352 RRGPDSSYSCLEVLSGHTKPVKSLAAVREKEL----DDVVSIISGSLDGEVKCWKVS 404
>TAIR|locus:2066276 [details] [associations]
symbol:AT2G26490 "AT2G26490" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0006944 "cellular membrane fusion" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002685 GenomeReviews:CT485783_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 EMBL:AC002505 HOGENOM:HOG000236376
ProtClustDB:CLSN2681936 EMBL:BT015086 EMBL:BT015900 IPI:IPI00520584
PIR:T00982 RefSeq:NP_180217.1 UniGene:At.50101
ProteinModelPortal:O48716 SMR:O48716 STRING:O48716 PaxDb:O48716
PRIDE:O48716 EnsemblPlants:AT2G26490.1 GeneID:817190
KEGG:ath:AT2G26490 TAIR:At2g26490 InParanoid:O48716 OMA:KVSPKNG
PhylomeDB:O48716 ArrayExpress:O48716 Genevestigator:O48716
Uniprot:O48716
Length = 465
Score = 721 (258.9 bits), Expect = 2.9e-71, P = 2.9e-71
Identities = 149/348 (42%), Positives = 214/348 (61%)
Query: 14 TLKGHNSYVSSLALAGKFLYTGSSDNEVRSW-DCNTFSSELDQEFLSNNNIVAVGKGAVK 72
+L ++ SLA LYTGS +R W + FS+ F N+ G VK
Sbjct: 91 SLVREEGHIYSLAATKDLLYTGSDSKNIRVWKNLKEFSA-----FKCNS-------GLVK 138
Query: 73 SLVVLADKLFSAHQDHKIRVWKINNQEPDHQK-YTRLATLPTLGDRAIKLLMPKNHVQIR 131
++V+ +K+F+ HQD KIRVWK++ P +Q + R TLPTL D L P+N+V+++
Sbjct: 139 AIVISGEKIFTGHQDGKIRVWKVS---PKNQSLHKRSGTLPTLKDIFKASLKPRNYVEVK 195
Query: 132 RHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAV 191
+H+T W+ H DAVS L+L ++ LLYS SWDRTIK+WR +D KCLESI AHDDA+N+V
Sbjct: 196 KHRTALWIKHADAVSCLSLNDEQGLLYSASWDRTIKVWRIADSKCLESIP-AHDDAVNSV 254
Query: 192 ALSDDGDVYTGSADKKIKVWRRSPGNK--KHSLVDVLERHNSGINALALSCDGSVLYSGA 249
+ + V++GSAD +K W+R K KH+L+ L + S + ALA+S +G+ +Y G+
Sbjct: 255 VSTTEAIVFSGSADGTVKAWKRDQQGKYTKHTLMQTLTKQESAVTALAVSKNGAAVYFGS 314
Query: 250 CDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYT 309
D + WE+E+ + G L+GH ++LC+ V LV SGSADKTI +W+ +T
Sbjct: 315 SDGLVNFWEREKQ---LNYGGILKGHKLAVLCLEVAGSLVFSGSADKTICVWKRDGNIHT 371
Query: 310 CLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQIS 357
CL+VL GH GPVKCLA D + + D ++V SGSLD +KVW +S
Sbjct: 372 CLSVLTGHTGPVKCLAVEADREASERRDKKWIVYSGSLDKSVKVWGVS 419
Score = 227 (85.0 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 83/321 (25%), Positives = 155/321 (48%)
Query: 13 TTLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAVK 72
+ K ++ V ++ ++G+ ++TG D ++R W + + L + + + + K ++K
Sbjct: 128 SAFKCNSGLVKAIVISGEKIFTGHQDGKIRVWKVSPKNQSLHKRSGTLPTLKDIFKASLK 187
Query: 73 SLVVLADK-----LFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLGDRAIKLLMPKNH 127
+ K L+ H D + +N D Q A+ DR IK+
Sbjct: 188 PRNYVEVKKHRTALWIKHAD-AVSCLSLN----DEQGLLYSASW----DRTIKVW----- 233
Query: 128 VQIRRHKTCTWVH-HVDAVSALALTKDETLLYSVSWDRTIKIWRTSD------FKCLESI 180
+I K + H DAV+++ T E +++S S D T+K W+ ++++
Sbjct: 234 -RIADSKCLESIPAHDDAVNSVVSTT-EAIVFSGSADGTVKAWKRDQQGKYTKHTLMQTL 291
Query: 181 TNAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALS 239
T + A+ A+A+S +G VY GS+D + W R K+ + +L+ H + L L
Sbjct: 292 TK-QESAVTALAVSKNGAAVYFGSSDGLVNFWERE---KQLNYGGILKGHKLAV--LCLE 345
Query: 240 CDGSVLYSGACDRSIIVWEKEEDDGNI-LVVGALRGHTKSILCMAVVSD----------- 287
GS+++SG+ D++I VW++ DGNI + L GHT + C+AV +D
Sbjct: 346 VAGSLVFSGSADKTICVWKR---DGNIHTCLSVLTGHTGPVKCLAVEADREASERRDKKW 402
Query: 288 LVCSGSADKTIRIWRGIDRNY 308
+V SGS DK++++W G+ ++
Sbjct: 403 IVYSGSLDKSVKVW-GVSESF 422
>TAIR|locus:2010157 [details] [associations]
symbol:AT1G49450 "AT1G49450" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC007504
ProtClustDB:CLSN2681936 IPI:IPI00540218 PIR:B96531
RefSeq:NP_175369.1 UniGene:At.28389 ProteinModelPortal:Q9XIB2
SMR:Q9XIB2 STRING:Q9XIB2 PRIDE:Q9XIB2 EnsemblPlants:AT1G49450.1
GeneID:841369 KEGG:ath:AT1G49450 TAIR:At1g49450 InParanoid:Q9XIB2
OMA:WEREKHL PhylomeDB:Q9XIB2 Genevestigator:Q9XIB2 Uniprot:Q9XIB2
Length = 471
Score = 679 (244.1 bits), Expect = 8.2e-67, P = 8.2e-67
Identities = 152/363 (41%), Positives = 218/363 (60%)
Query: 8 DHHCLTTLKGHNSYVSSLALAGKFLYTGSSDNEVRSW-DCNTFSSELDQEFLSNNNIVAV 66
D+ + T+ +V SLA +G L+TGS +R W D FS F S +
Sbjct: 123 DNGLIGTVVRQEGHVYSLAASGDLLFTGSDSKNIRVWKDLKDFSG-----FKSTS----- 172
Query: 67 GKGAVKSLVVLAD-KLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLGDRAIKLLMPK 125
G VK++VV D ++F+ HQD KIRVW+ + + P+ KY+R+ +LPTL + K + P+
Sbjct: 173 --GFVKAIVVTRDNRVFTGHQDGKIRVWRGSKKNPE--KYSRVGSLPTLKEFLTKSVNPR 228
Query: 126 NHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHD 185
N+V++RR K + H DAVS L+L +D LLYS SWD+T+K+WR SD KCLESI AHD
Sbjct: 229 NYVEVRRRKNVLKIRHFDAVSCLSLNEDLGLLYSGSWDKTLKVWRLSDSKCLESI-EAHD 287
Query: 186 DAINAVALSDDGDVYTGSADKKIKVWRRSPGNK--KHSLVDVLERHNSGINALALSCDGS 243
DA+N V D V+TGSAD +KVW+R K KH LV VL + + + ALA++ +
Sbjct: 288 DAVNTVVSGFDDLVFTGSADGTLKVWKREVQGKEMKHVLVQVLMKQENAVTALAVNLTDA 347
Query: 244 VLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIW-R 302
V+Y G+ D ++ WE+++ + G + GH ++LC+A L+ SG ADK I +W R
Sbjct: 348 VVYCGSSDGTVNFWERQK---YLTHKGTIHGHRMAVLCLATAGSLLLSGGADKNICVWKR 404
Query: 303 GIDRNYTCLAVLEGHRGPVKCLAAAID-----NDRCDSS---DTSYLVCSGSLDCDIKVW 354
D ++TCL+VL H GPVKCLAA + ND D D ++V SGSLD +KVW
Sbjct: 405 NGDGSHTCLSVLMDHEGPVKCLAAVEEAEEDHNDGDDGGEKGDQRWIVYSGSLDNSVKVW 464
Query: 355 QIS 357
+++
Sbjct: 465 RVT 467
>TAIR|locus:2085929 [details] [associations]
symbol:AT3G18950 "AT3G18950" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AP000735
HOGENOM:HOG000236376 ProtClustDB:CLSN2681936 EMBL:BT005434
EMBL:AK117650 IPI:IPI00535619 RefSeq:NP_188525.1 UniGene:At.38474
ProteinModelPortal:Q9LJ71 SMR:Q9LJ71 STRING:Q9LJ71
EnsemblPlants:AT3G18950.1 GeneID:821427 KEGG:ath:AT3G18950
TAIR:At3g18950 InParanoid:Q9LJ71 OMA:LAINQES PhylomeDB:Q9LJ71
Genevestigator:Q9LJ71 Uniprot:Q9LJ71
Length = 473
Score = 661 (237.7 bits), Expect = 6.7e-65, P = 6.7e-65
Identities = 147/357 (41%), Positives = 215/357 (60%)
Query: 8 DHHCLTTLKGHNSYVSSLALAGKFLYTGSSDNEVRSW-DCNTFSSELDQEFLSNNNIVAV 66
D+ + T+ + +V SLA +G L+TGS +R W D + F S +
Sbjct: 127 DNGLIGTIVRQDGHVYSLAASGDLLFTGSDSKNIRVWKDLKDHTG-----FKSTS----- 176
Query: 67 GKGAVKSLVVLAD-KLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLGDRAIKLLMPK 125
G VK++V+ D ++F+ HQD KIRVW+ + + Y+R+ +LPTL + K + PK
Sbjct: 177 --GLVKAIVITGDNRIFTGHQDGKIRVWRGSKRRTGG--YSRIGSLPTLKEFLTKSVNPK 232
Query: 126 NHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHD 185
N+V++RR K + H DAVS L+L ++ LLYS SWD+T+K+WR SD KCLESI AHD
Sbjct: 233 NYVEVRRRKNVLKIRHYDAVSCLSLNEELGLLYSGSWDKTLKVWRLSDSKCLESI-QAHD 291
Query: 186 DAINAVALSDDGDVYTGSADKKIKVWRRSPGNK--KHSLVDVLERHNSGINALALSCDGS 243
DAIN VA D ++TGSAD +KVW+R K KH LV+VL + + + ALA++ +
Sbjct: 292 DAINTVAAGFDDLLFTGSADGTLKVWKRELQGKGTKHFLVNVLMKQENAVTALAVNITAA 351
Query: 244 VLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWR- 302
V+Y G+ D ++ WE ++ + G LRGH ++LC+A LV SG ADK I +WR
Sbjct: 352 VVYCGSSDGTVNFWEGQK---YLSHGGTLRGHRLAVLCLAAAGSLVLSGGADKNICVWRR 408
Query: 303 GIDRNYTCLAVLEGHRGPVKCLAAAIDNDRC--DSSDTSYLVCSGSLDCDIKVWQIS 357
D +++CL+VL H GPVKCL A D+ + D ++V SGSLD +KVW+++
Sbjct: 409 NGDGSHSCLSVLMDHVGPVKCLTAVEDDGEGHREKGDQKWIVYSGSLDKSVKVWRVT 465
Score = 139 (54.0 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 41/136 (30%), Positives = 64/136 (47%)
Query: 143 DAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTG 202
+AV+ALA+ ++Y S D T+ W + H A+ +A + V +G
Sbjct: 339 NAVTALAVNITAAVVYCGSSDGTVNFWEGQKYLSHGGTLRGHRLAVLCLAAAGSL-VLSG 397
Query: 203 SADKKIKVWRRSPGNKKHSLVDVLERHNSGINAL-ALSCDGS----------VLYSGACD 251
ADK I VWRR+ G+ HS + VL H + L A+ DG ++YSG+ D
Sbjct: 398 GADKNICVWRRN-GDGSHSCLSVLMDHVGPVKCLTAVEDDGEGHREKGDQKWIVYSGSLD 456
Query: 252 RSIIVWEKEEDDGNIL 267
+S+ VW E ++
Sbjct: 457 KSVKVWRVTESASTVI 472
>TAIR|locus:2116194 [details] [associations]
symbol:AT4G34380 "AT4G34380" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AL035521 EMBL:AL161585
HOGENOM:HOG000236376 ProtClustDB:CLSN2681936 EMBL:BT005888
EMBL:AK118385 IPI:IPI00526524 PIR:T04784 RefSeq:NP_195164.1
UniGene:At.31507 ProteinModelPortal:Q9SZ03 SMR:Q9SZ03 IntAct:Q9SZ03
STRING:Q9SZ03 EnsemblPlants:AT4G34380.1 GeneID:829588
KEGG:ath:AT4G34380 TAIR:At4g34380 InParanoid:Q9SZ03 OMA:VEEERAC
PhylomeDB:Q9SZ03 Genevestigator:Q9SZ03 Uniprot:Q9SZ03
Length = 495
Score = 650 (233.9 bits), Expect = 9.7e-64, P = 9.7e-64
Identities = 139/350 (39%), Positives = 210/350 (60%)
Query: 21 YVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAVKSLVVLADK 80
++ SLA +G LYTGS +R W + + F S++ G +K++V+ D+
Sbjct: 127 HIYSLAASGDLLYTGSDSKNIRVWK----NLKEHAGFKSSS-------GLIKAIVIFGDR 175
Query: 81 LFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLGDRAIKLLMPKNHVQIRRHKTCTWVH 140
+F+ HQD KIR+WK++ ++P K+ R+ TLPT + PK+ +++RR++
Sbjct: 176 IFTGHQDGKIRIWKVSKRKPG--KHKRVGTLPTFKSMVKSSVNPKHFMEVRRNRNSVKTK 233
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H DAVS+L+L + LLYS SWD TIK+WR +D KCLESI +AHDDAIN+V D V+
Sbjct: 234 HNDAVSSLSLDVELGLLYSSSWDTTIKVWRIADSKCLESI-HAHDDAINSVMSGFDDLVF 292
Query: 201 TGSADKKIKVWRRSPGNK--KHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWE 258
TGSAD +KVW+R K KH+L VL + + + ALA+ S++Y G+ D + WE
Sbjct: 293 TGSADGTVKVWKRELQGKGTKHTLAQVLLKQENAVTALAVKSQSSIVYCGSSDGLVNYWE 352
Query: 259 KEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRG--IDRNYTCLAVLEG 316
+ + G L+GH ++LC+ + +L+ SGSADK I +WR D+++ CL+VL G
Sbjct: 353 RSKRS---FTGGILKGHKSAVLCLGIAGNLLLSGSADKNICVWRRDPSDKSHQCLSVLTG 409
Query: 317 HRGPVKCLAAAIDNDR-CDSS--------DTSYLVCSGSLDCDIKVWQIS 357
H GPVKCLA ++ +R C D +++ SGSLD +KVW++S
Sbjct: 410 HMGPVKCLA--VEEERACHQGAKASVAEGDRKWIIYSGSLDKSVKVWRVS 457
>TAIR|locus:2074825 [details] [associations]
symbol:AT3G50390 "AT3G50390" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BT030030 IPI:IPI00547079
RefSeq:NP_190608.2 UniGene:At.50263 ProteinModelPortal:A2RVN9
SMR:A2RVN9 STRING:A2RVN9 PRIDE:A2RVN9 EnsemblPlants:AT3G50390.1
GeneID:824203 KEGG:ath:AT3G50390 TAIR:At3g50390
HOGENOM:HOG000236376 InParanoid:A2RVN9 OMA:HKKLLQF PhylomeDB:A2RVN9
ProtClustDB:CLSN2681936 Genevestigator:A2RVN9 Uniprot:A2RVN9
Length = 469
Score = 648 (233.2 bits), Expect = 1.6e-63, P = 1.6e-63
Identities = 142/354 (40%), Positives = 214/354 (60%)
Query: 12 LTTLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNT-FSSELDQEFLSNNNIVAVGKGA 70
L +L ++ SLA +G LYTGS +R W + FSS F SN+ G
Sbjct: 91 LGSLVREEGHIYSLATSGDLLYTGSDSKNIRVWKNHVEFSS-----FKSNS-------GL 138
Query: 71 VKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLGDRAIKLLMPKNHVQI 130
VK++V+ DK+F+ HQD KIRVWK ++E + + R+ T+P L D ++P ++
Sbjct: 139 VKAIVLAGDKIFTGHQDGKIRVWKAASKESNVHR--RVGTMPNLLDYIRNSIVPSSYFNF 196
Query: 131 -RRHKTCTWV--HHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDA 187
RR+++ + H+DA+S LAL++D+ LLYS SWD+T K+WR SD +C+ES+ NAH+DA
Sbjct: 197 TRRNRSSAALGFRHLDAISCLALSEDKRLLYSGSWDKTFKVWRVSDLRCVESV-NAHEDA 255
Query: 188 INAVALSDDGDVYTGSADKKIKVWRRSPGNK--KHSLVDVLERHNSGINALALSCDGSVL 245
+NAV DG V+TGSAD +KVWRR K KH + L + + + A+A+ +++
Sbjct: 256 VNAVVSGFDGLVFTGSADGTVKVWRREDQAKDTKHFFSETLLKQDCAVTAIAVDQSATLV 315
Query: 246 YSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGID 305
Y G+ D ++ WE+E + N G L+GH ++LC+ +L+ SGSAD IR+WR +
Sbjct: 316 YCGSSDGTVNFWERENNMKN---GGVLKGHKLAVLCLVAAGNLMFSGSADLGIRVWRRPE 372
Query: 306 RN--YTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQIS 357
+ CL+VL GH GPVKCLA D + S + ++V SGSLD +K+W++S
Sbjct: 373 GGGEHVCLSVLTGHAGPVKCLAVERDQESV-SGERRWIVYSGSLDRSVKMWRVS 425
Score = 154 (59.3 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 41/127 (32%), Positives = 65/127 (51%)
Query: 144 AVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDV-YTG 202
AV+A+A+ + TL+Y S D T+ W + + H A+ + L G++ ++G
Sbjct: 302 AVTAIAVDQSATLVYCGSSDGTVNFWERENNMKNGGVLKGHKLAV--LCLVAAGNLMFSG 359
Query: 203 SADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCD-----GS---VLYSGACDRSI 254
SAD I+VWRR G +H + VL H + LA+ D G ++YSG+ DRS+
Sbjct: 360 SADLGIRVWRRPEGGGEHVCLSVLTGHAGPVKCLAVERDQESVSGERRWIVYSGSLDRSV 419
Query: 255 IVWEKEE 261
+W E
Sbjct: 420 KMWRVSE 426
Score = 71 (30.1 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 15/63 (23%), Positives = 33/63 (52%)
Query: 3 NLSVVDHHC-LTTLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNN 61
N+ V +H ++ K ++ V ++ LAG ++TG D ++R W + S + + +
Sbjct: 119 NIRVWKNHVEFSSFKSNSGLVKAIVLAGDKIFTGHQDGKIRVWKAASKESNVHRRVGTMP 178
Query: 62 NIV 64
N++
Sbjct: 179 NLL 181
>TAIR|locus:2015423 [details] [associations]
symbol:AT1G47610 "AT1G47610" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AC007519 HOGENOM:HOG000236376 ProtClustDB:CLSN2681936
IPI:IPI00534811 PIR:A96517 RefSeq:NP_175192.1 UniGene:At.47680
ProteinModelPortal:Q9SX94 SMR:Q9SX94 STRING:Q9SX94
EnsemblPlants:AT1G47610.1 GeneID:841170 KEGG:ath:AT1G47610
TAIR:At1g47610 InParanoid:Q9SX94 OMA:CVWRRDG PhylomeDB:Q9SX94
Genevestigator:Q9SX94 Uniprot:Q9SX94
Length = 351
Score = 645 (232.1 bits), Expect = 3.3e-63, P = 3.3e-63
Identities = 143/343 (41%), Positives = 205/343 (59%)
Query: 21 YVSSLALAGKFLYTGSSDNEVRSW-DCNTFSSELDQEFLSNNNIVAVGKGAVKSLVVLAD 79
++ SLA LYTGS +N +R W + N FS F SN+ G VK++V+ +
Sbjct: 26 HIYSLAATNDLLYTGSDNNYIRVWKNLNEFSG-----FKSNS-------GLVKAIVISRE 73
Query: 80 -KLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLGDRAIKLLMPKNHVQIRRHKTCTW 138
K+F+ HQD KIRVWK +++ P + YTR +LP L D + P N+V++RR +T W
Sbjct: 74 AKVFTGHQDGKIRVWKTSSKNP--RVYTRAGSLPALKDVLKSSVKPSNYVEVRRCRTALW 131
Query: 139 VHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD 198
+ H DAVS L+L +D+ LLYS SWDRT+K+WR D KC+ESI AHDDA+N+V ++
Sbjct: 132 IKHSDAVSCLSLAEDQGLLYSASWDRTVKVWRIHDLKCIESI-KAHDDAVNSVTTAESL- 189
Query: 199 VYTGSADKKIKVWRRSPGNKK--HSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIV 256
V+TGSAD +KVW+R K+ HSL L + S + AL S +YSG+ D ++
Sbjct: 190 VFTGSADGTVKVWKREIRGKRTAHSLFQTLLKQESAVTALVTS--HMAVYSGSSDGAVNF 247
Query: 257 WEKEEDDGNILV-VGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLE 315
WE D +L + H ++LC+A L+ SG+ADK I +WR + +TC++VL
Sbjct: 248 WEM--GDKKLLKHCEVFKKHRLAVLCIAAAGKLLFSGAADKKICVWRREGKVHTCVSVLT 305
Query: 316 GHRGPVKCLAAAIDN--DRCDSSDTSYLVCSGSLDCDIKVWQI 356
GH GPVKCLA + + D D ++ SGSLD +KVW++
Sbjct: 306 GHTGPVKCLAVVEPSGGEEEDGGDGRLVLYSGSLDKSVKVWRV 348
Score = 186 (70.5 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 71/270 (26%), Positives = 129/270 (47%)
Query: 68 KGAVKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLGDRAIKLLMPKNH 127
+G + SL D L++ ++ IRVWK N+ + + L + R K+
Sbjct: 24 EGHIYSLAATNDLLYTGSDNNYIRVWKNLNEFSGFKSNSGLVKAIVIS-REAKVFTGHQD 82
Query: 128 VQIRRHKTCTWVHHV-DAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDD 186
+IR KT + V +L KD L SV +++ R C ++ H D
Sbjct: 83 GKIRVWKTSSKNPRVYTRAGSLPALKD-VLKSSVKPSNYVEVRR-----CRTALWIKHSD 136
Query: 187 AINAVALSDD-GDVYTGSADKKIKVWRRSPGNKKHSL--VDVLERHNSGINALALSCDGS 243
A++ ++L++D G +Y+ S D+ +KVWR H L ++ ++ H+ +N++ + S
Sbjct: 137 AVSCLSLAEDQGLLYSASWDRTVKVWRI------HDLKCIESIKAHDDAVNSVTTA--ES 188
Query: 244 VLYSGACDRSIIVWEKE---EDDGNILVVGALRGHTKSILCMAVVSDL-VCSGSADKTIR 299
++++G+ D ++ VW++E + + L L+ +S + V S + V SGS+D +
Sbjct: 189 LVFTGSADGTVKVWKREIRGKRTAHSLFQTLLK--QESAVTALVTSHMAVYSGSSDGAVN 246
Query: 300 IWRGIDRNYT--CLAVLEGHRGPVKCLAAA 327
W D+ C V + HR V C+AAA
Sbjct: 247 FWEMGDKKLLKHC-EVFKKHRLAVLCIAAA 275
>TAIR|locus:2083710 [details] [associations]
symbol:AT3G51930 "AT3G51930" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 EMBL:AL049711 HOGENOM:HOG000236376 EMBL:BT008335
EMBL:AK228303 IPI:IPI00547415 PIR:T49072 RefSeq:NP_190761.1
UniGene:At.35344 ProteinModelPortal:Q9SV11 SMR:Q9SV11 STRING:Q9SV11
PRIDE:Q9SV11 EnsemblPlants:AT3G51930.1 GeneID:824356
KEGG:ath:AT3G51930 TAIR:At3g51930 InParanoid:Q9SV11 OMA:SKVFTAH
PhylomeDB:Q9SV11 ProtClustDB:CLSN2684735 Genevestigator:Q9SV11
Uniprot:Q9SV11
Length = 415
Score = 616 (221.9 bits), Expect = 3.9e-60, P = 3.9e-60
Identities = 140/360 (38%), Positives = 206/360 (57%)
Query: 12 LTTLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAV 71
L L H VSSLAL G+FL + S ++ W + D + + G G+V
Sbjct: 54 LAVLSAHVGSVSSLALCGEFLLSASQGKDIIVWQ------QPDLKIFAK---FGQGDGSV 104
Query: 72 KSLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLGDRAIKLLMPKNHVQIR 131
K+LV + K+F+AHQD +IRVWK++ + ++ + + TLPT D K + N+VQ R
Sbjct: 105 KALVSVGSKVFTAHQDSRIRVWKVSRRNSENA-FRLVDTLPTTKDYLGKFMKQSNYVQTR 163
Query: 132 RHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAV 191
R+ W+ H D++S LA+ ++YS SWD+T+K+WR SD KCLESI AHDDAIN +
Sbjct: 164 RNHKRLWIEHADSISCLAVHAG--IIYSGSWDKTLKVWRLSDLKCLESI-KAHDDAINGL 220
Query: 192 ALSDDGDVYTGSADKKIKVWRR----------SPGNKKHSLVDVLE-RHNSGINALALSC 240
++ DG VY+ SAD K+K+W + S + H L LE R +N++ +S
Sbjct: 221 -VAGDGRVYSASADGKVKIWGKEKRKQIESTSSSSSSLHVLKATLEGRAEVSVNSVVVSG 279
Query: 241 DGSVLYSGACDRSIIVWEKEEDDGNILV--VG-ALRGHTKSILCMAVVSDLVCSGSADKT 297
DG+ +Y G D +I WEK+E +G+ +G RGH ++LCM VV ++VCSGSADK+
Sbjct: 280 DGNWVYGGGSDGFVIGWEKKEKEGDFEEWRLGFETRGHNMAVLCMCVVGEMVCSGSADKS 339
Query: 298 IRIWRGIDRNYTC-LAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
I +WR C V+ GH GPVKCL A+ +N +++ SG LD ++VW +
Sbjct: 340 IGLWRREVTGMLCKFGVIHGHEGPVKCLQASPNN-----VGAGFMLYSGGLDKSLRVWWV 394
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 243 (90.6 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 87/300 (29%), Positives = 145/300 (48%)
Query: 12 LTTLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKG 69
L TL+GH+ ++ ++ + G+ L +GS+D ++ WD S L Q +++ V
Sbjct: 34 LQTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWD--PASGGLKQTLEGHSSSVQ---- 87
Query: 70 AVKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLGDRAIKLLMPKNHVQ 129
+V + L S D I++W N D K+T + DR + N Q
Sbjct: 88 SV-AFSPNGQLLASGSSDTTIKLW---NSASDSLKHT----MEGHSDRVESVAFSPNG-Q 138
Query: 130 IRRHKTCTWVH----HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKC-LESITNAH 184
+ + H H D V ++A + D LL S S ++TIK+W ++ C L+ H
Sbjct: 139 LWNPAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSAT--CGLKHTLGGH 196
Query: 185 DDAINAVALSDDGDVY-TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGS 243
+ + + S DG + +GS D IK+W G+ KH+L E H++ I +LA S +G
Sbjct: 197 SNWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTL----EGHSNKIESLAFSPNGQ 252
Query: 244 VLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIW 301
+L SG+ D +I +W+ G+ L+GH+ +L + D L+ SGS D TI++W
Sbjct: 253 LLASGSSDATIKLWDTAT--GSFR--HTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLW 308
Score = 188 (71.2 bits), Expect = 5.1e-12, P = 5.1e-12
Identities = 68/243 (27%), Positives = 108/243 (44%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H D + + + D LL S S D TIK+W + L+ H ++ +VA S +G +
Sbjct: 40 HSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGG-LKQTLEGHSSSVQSVAFSPNGQLL 98
Query: 201 -TGSADKKIKVWRRSPGNKKH--------------------------SLVDVLERHNSGI 233
+GS+D IK+W + + KH SL +E H+ +
Sbjct: 99 ASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQLWNPAIGSLKHTIEGHSDWV 158
Query: 234 NALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCS 291
++A S DG +L SG+ +++I +W D + L GH+ +L + D L+ S
Sbjct: 159 LSVAFSPDGQLLASGSAEKTIKLW----DSATCGLKHTLGGHSNWVLPLVFSPDGRLLAS 214
Query: 292 GSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDI 351
GS D TI++W + + LEGH ++ LA S L+ SGS D I
Sbjct: 215 GSNDATIKLWD--PPSGSLKHTLEGHSNKIESLAF---------SPNGQLLASGSSDATI 263
Query: 352 KVW 354
K+W
Sbjct: 264 KLW 266
Score = 143 (55.4 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 68/243 (27%), Positives = 108/243 (44%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H +V ++A + + LL S S D TIK+W ++ L+ H D + +VA S +G ++
Sbjct: 82 HSSSVQSVAFSPNGQLLASGSSDTTIKLWNSAS-DSLKHTMEGHSDRVESVAFSPNGQLW 140
Query: 201 T---GSADKKIKV---W----RRSP-------GNKKHS----------LVDVLERHNSGI 233
GS I+ W SP G+ + + L L H++ +
Sbjct: 141 NPAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNWV 200
Query: 234 NALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSI--LCMAVVSDLVCS 291
L S DG +L SG+ D +I +W+ G++ L GH+ I L + L+ S
Sbjct: 201 LPLVFSPDGRLLASGSNDATIKLWDPPS--GSLK--HTLEGHSNKIESLAFSPNGQLLAS 256
Query: 292 GSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDI 351
GS+D TI++W ++ L+GH V L+ D S L+ SGS D I
Sbjct: 257 GSSDATIKLWDTATGSFR--HTLKGHSDMV--LSVVFSPD-------SQLLESGSGDNTI 305
Query: 352 KVW 354
K+W
Sbjct: 306 KLW 308
Score = 142 (55.0 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 40/129 (31%), Positives = 66/129 (51%)
Query: 135 TCTWVH----HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINA 190
TC H H + V L + D LL S S D TIK+W L+ H + I +
Sbjct: 186 TCGLKHTLGGHSNWVLPLVFSPDGRLLASGSNDATIKLWDPPSGS-LKHTLEGHSNKIES 244
Query: 191 VALSDDGDVY-TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGA 249
+A S +G + +GS+D IK+W + G+ +H+L + H+ + ++ S D +L SG+
Sbjct: 245 LAFSPNGQLLASGSSDATIKLWDTATGSFRHTL----KGHSDMVLSVVFSPDSQLLESGS 300
Query: 250 CDRSIIVWE 258
D +I +W+
Sbjct: 301 GDNTIKLWD 309
Score = 117 (46.2 bits), Expect = 0.00049, P = 0.00049
Identities = 28/83 (33%), Positives = 44/83 (53%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H + + +LA + + LL S S D TIK+W T+ ++ H D + +V S D +
Sbjct: 238 HSNKIESLAFSPNGQLLASGSSDATIKLWDTATGSFRHTL-KGHSDMVLSVVFSPDSQLL 296
Query: 201 -TGSADKKIKVWRRSPGNKKHSL 222
+GS D IK+W + G KHS+
Sbjct: 297 ESGSGDNTIKLWDPATGILKHSM 319
>DICTYBASE|DDB_G0289115 [details] [associations]
symbol:mhkB "myosin heavy chain kinase B"
species:44689 "Dictyostelium discoideum" [GO:0018107
"peptidyl-threonine phosphorylation" evidence=IDA] [GO:0031037
"myosin II filament disassembly" evidence=IMP] [GO:0005826
"actomyosin contractile ring" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0046777
"protein autophosphorylation" evidence=IDA] [GO:0045159 "myosin II
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA;IC]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA;IDA] [GO:0016905 "myosin heavy chain kinase activity"
evidence=IEA;IDA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR004166 InterPro:IPR011009 InterPro:IPR015943
Pfam:PF00400 Pfam:PF02816 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS51158 SMART:SM00320 SMART:SM00811 dictyBase:DDB_G0289115
GO:GO:0005524 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0046777
GenomeReviews:CM000154_GR GO:GO:0000910 KO:K00924 GO:GO:0005826
GO:GO:0018107 EMBL:AAFI02000130 BRENDA:2.7.11.7 GO:GO:0031037
GO:GO:0016905 EMBL:U90946 RefSeq:XP_636368.1
ProteinModelPortal:P90648 EnsemblProtists:DDB0191333 GeneID:8626969
KEGG:ddi:DDB_G0289115 OMA:NDERNTP ProtClustDB:CLSZ2846619
Uniprot:P90648
Length = 732
Score = 244 (91.0 bits), Expect = 3.8e-18, P = 3.8e-18
Identities = 79/298 (26%), Positives = 136/298 (45%)
Query: 12 LTTLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAV 71
+ T+KG++ S L + L+TG SDN +R +D + + E Q + +G V
Sbjct: 454 IETIKGYH-VTSHLCICDNLLFTGCSDNSIRVYDYKSQNMECVQTLKGH-------EGPV 505
Query: 72 KSLVVLADKLFSAHQDHKIRVWKINNQEPDH--QKYTRLATLPTLGDRAIKLLMPKNHVQ 129
+S+ LFS DH I+VW + + + + L D+ + ++
Sbjct: 506 ESICYNDQYLFSGSSDHSIKVWDLKKLRCIFTLEGHDKPVHTVLLNDKYLFSGSSDKTIK 565
Query: 130 IRRHKT--CTWV--HHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHD 185
+ KT C + H AV L ++ L+S S D+TIK+W F+C ++ H
Sbjct: 566 VWDLKTLECKYTLESHARAVKTLCISGQ--YLFSGSNDKTIKVWDLKTFRCNYTL-KGHT 622
Query: 186 DAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVL 245
+ + + ++Y+GS DK I+VW K L H+ + + + CD +L
Sbjct: 623 KWVTTICILGT-NLYSGSYDKTIRVWNL----KSLECSATLRGHDRWVEHMVI-CD-KLL 675
Query: 246 YSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVC--SGSADKTIRIW 301
++ + D +I +W+ E N L GH ++ C+AV D C S S D++IR+W
Sbjct: 676 FTASDDNTIKIWDLETLRCNT----TLEGHNATVQCLAVWEDKKCVISCSHDQSIRVW 729
Score = 229 (85.7 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 64/204 (31%), Positives = 105/204 (51%)
Query: 153 DETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSADKKIKVWR 212
++ L+S S D +IK+W +C+ ++ HD ++ V L+D +++GS+DK IKVW
Sbjct: 511 NDQYLFSGSSDHSIKVWDLKKLRCIFTL-EGHDKPVHTVLLNDKY-LFSGSSDKTIKVWD 568
Query: 213 RSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGAL 272
K++L E H + L +S G L+SG+ D++I VW+ + N L
Sbjct: 569 LKTLECKYTL----ESHARAVKTLCIS--GQYLFSGSNDKTIKVWDLKTFRCNY----TL 618
Query: 273 RGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDR 332
+GHTK + + ++ + SGS DKTIR+W ++ C A L GH V+ +
Sbjct: 619 KGHTKWVTTICILGTNLYSGSYDKTIRVWNL--KSLECSATLRGHDRWVEHMVI------ 670
Query: 333 CDSSDTSYLVCSGSLDCDIKVWQI 356
CD L+ + S D IK+W +
Sbjct: 671 CDK-----LLFTASDDNTIKIWDL 689
Score = 210 (79.0 bits), Expect = 4.3e-14, P = 4.3e-14
Identities = 70/254 (27%), Positives = 112/254 (44%)
Query: 11 CLTTLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGA 70
C+ TLKGH V S+ ++L++GSSD+ ++ WD E G
Sbjct: 494 CVQTLKGHEGPVESICYNDQYLFSGSSDHSIKVWDLKKLRCIFTLE----------GHDK 543
Query: 71 VKSLVVLADK-LFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLGDRAIKLLMPKNH-- 127
V+L DK LFS D I+VW + E + + + TL L N
Sbjct: 544 PVHTVLLNDKYLFSGSSDKTIKVWDLKTLECKYTLESHARAVKTLCISGQYLFSGSNDKT 603
Query: 128 VQIRRHKT--CTWV--HHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA 183
+++ KT C + H V+ + + T LYS S+D+TI++W +C ++
Sbjct: 604 IKVWDLKTFRCNYTLKGHTKWVTTICILG--TNLYSGSYDKTIRVWNLKSLECSATL-RG 660
Query: 184 HDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGS 243
HD + + + D ++T S D IK+W +L E HN+ + LA+ D
Sbjct: 661 HDRWVEHMVICDKL-LFTASDDNTIKIWDLETLRCNTTL----EGHNATVQCLAVWEDKK 715
Query: 244 VLYSGACDRSIIVW 257
+ S + D+SI VW
Sbjct: 716 CVISCSHDQSIRVW 729
Score = 208 (78.3 bits), Expect = 7.2e-14, P = 7.2e-14
Identities = 61/202 (30%), Positives = 100/202 (49%)
Query: 153 DETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSADKKIKVWR 212
++ L+S S D+TIK+W +C ++ +H A+ + +S +++GS DK IKVW
Sbjct: 551 NDKYLFSGSSDKTIKVWDLKTLECKYTL-ESHARAVKTLCISGQY-LFSGSNDKTIKVWD 608
Query: 213 RSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGAL 272
++L + H + + + G+ LYSG+ D++I VW + ++ L
Sbjct: 609 LKTFRCNYTL----KGHTKWVTTICIL--GTNLYSGSYDKTIRVWNLK----SLECSATL 658
Query: 273 RGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDR 332
RGH + + M + L+ + S D TI+IW ++ C LEGH V+CLA D +
Sbjct: 659 RGHDRWVEHMVICDKLLFTASDDNTIKIW-DLE-TLRCNTTLEGHNATVQCLAVWEDK-K 715
Query: 333 CDSSDTSYLVCSGSLDCDIKVW 354
C V S S D I+VW
Sbjct: 716 C--------VISCSHDQSIRVW 729
Score = 183 (69.5 bits), Expect = 4.9e-11, P = 4.9e-11
Identities = 66/228 (28%), Positives = 107/228 (46%)
Query: 2 HNLSVVDH---HCLTTLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFL 58
H++ V D C+ TL+GH+ V ++ L K+L++GSSD ++ WD T + E
Sbjct: 522 HSIKVWDLKKLRCIFTLEGHDKPVHTVLLNDKYLFSGSSDKTIKVWDLKTLECKYTLESH 581
Query: 59 SNNNIVAVGKGAVKSLVVLADKLFSAHQDHKIRVWKI-----NNQEPDHQKY-TRLATLP 112
+ AVK+L + LFS D I+VW + N H K+ T + L
Sbjct: 582 AR---------AVKTLCISGQYLFSGSNDKTIKVWDLKTFRCNYTLKGHTKWVTTICILG 632
Query: 113 T---LG--DRAIKLLMPKN---HVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDR 164
T G D+ I++ K+ +R H WV H+ + D+ LL++ S D
Sbjct: 633 TNLYSGSYDKTIRVWNLKSLECSATLRGHDR--WVEHM-------VICDK-LLFTASDDN 682
Query: 165 TIKIWRTSDFKCLESITNAHDDAINAVALSDDGD-VYTGSADKKIKVW 211
TIKIW +C ++ H+ + +A+ +D V + S D+ I+VW
Sbjct: 683 TIKIWDLETLRCNTTL-EGHNATVQCLAVWEDKKCVISCSHDQSIRVW 729
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 196 (74.1 bits), Expect = 4.2e-18, Sum P(2) = 4.2e-18
Identities = 71/219 (32%), Positives = 104/219 (47%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H +V+ L D LLYS S DRTIK+WR D ++ H +N +ALS D +
Sbjct: 245 HTQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTL-QGHGHWVNTMALSTDYALR 302
Query: 201 TGSADK-KIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEK 259
TG+ + + V +P + + SL ++ ER S N L L SG+ D ++ +W
Sbjct: 303 TGAFEPAEASV---NPQDLQGSLQELKERALSRYN-LVRGQGPERLVSGSDDFTLFLWSP 358
Query: 260 EEDDGNILVVGALRGHTKSI--LCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGH 317
ED + + GH I + + S +V S S DK+I++W G Y LA L GH
Sbjct: 359 AEDKKPLT---RMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKY--LASLRGH 413
Query: 318 RGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
V +A + D S L+ SGS D +KVW +
Sbjct: 414 VAAVYQIAWSAD---------SRLLVSGSSDSTLKVWDV 443
Score = 162 (62.1 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 79/310 (25%), Positives = 127/310 (40%)
Query: 14 TLKGHNSYVSSLALAG-------KFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAV 66
TL GH+ +++ L+ +++ + S D VR WD T + ++ + V
Sbjct: 194 TLAGHSKWITGLSWEPLHANPECRYVASSSKDGSVRIWD--TTAGRCERILTGHTQSVTC 251
Query: 67 GKGAVKSLVVLADKLFSAHQDHKIRVWKINNQE-----PDHQKYTRLATLPTLGDRAIKL 121
+ L L+SA QD I+VW+ ++ H + L T D A++
Sbjct: 252 LRWGGDGL------LYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALST--DYALRT 303
Query: 122 -LMPKNHVQIRRHKTCTWVHHVD--AVSALALTKDE--TLLYSVSWDRTIKIWRTS-DFK 175
+ + + A+S L + + L S S D T+ +W + D K
Sbjct: 304 GAFEPAEASVNPQDLQGSLQELKERALSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKK 363
Query: 176 CLESITNAHDDAINAVALSDDGDVY-TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGIN 234
L +T H IN V S D + + S DK IK+W G SL H + +
Sbjct: 364 PLTRMTG-HQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASL----RGHVAAVY 418
Query: 235 ALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSG 292
+A S D +L SG+ D ++ VW+ + L + L GH + + D V SG
Sbjct: 419 QIAWSADSRLLVSGSSDSTLKVWDVKAQK---LAMD-LPGHADEVYAVDWSPDGQRVASG 474
Query: 293 SADKTIRIWR 302
DK +RIWR
Sbjct: 475 GKDKCLRIWR 484
Score = 157 (60.3 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 56/196 (28%), Positives = 91/196 (46%)
Query: 159 SVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNK 218
S S D +++IW T+ +C E I H ++ + DG +Y+ S D+ IKVWR G
Sbjct: 221 SSSKDGSVRIWDTTAGRC-ERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDG-- 277
Query: 219 KHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKS 278
L L+ H +N +ALS D + L +GA + + ++ G++ + R ++
Sbjct: 278 --VLCRTLQGHGHWVNTMALSTDYA-LRTGAFEPAEASVNPQDLQGSLQELKE-RALSRY 333
Query: 279 ILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDT 338
L + + SGS D T+ +W + L + GH+ A+ N S D
Sbjct: 334 NLVRGQGPERLVSGSDDFTLFLWSPAEDKKP-LTRMTGHQ--------ALINQVLFSPD- 383
Query: 339 SYLVCSGSLDCDIKVW 354
S +V S S D IK+W
Sbjct: 384 SRIVASASFDKSIKLW 399
Score = 148 (57.2 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 57/219 (26%), Positives = 98/219 (44%)
Query: 121 LLMPKNHVQIRRHKTCT--WVHHVDAVSALALTKDETLLYSVSWDRTIKIW----RTSDF 174
+ P+ ++R CT H +AV ++A + L S S D T++ W T F
Sbjct: 91 IYQPQAIFRVRAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHF 150
Query: 175 KCLESITNAHDDAINAVALSDDG-DVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGI 233
C H + +++ S DG + +G + +I +W S G + + + +G+
Sbjct: 151 TC-----KGHRHWVLSISWSPDGRKLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGL 205
Query: 234 NALALSCDGSVLY--SGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD-LVC 290
+ L + Y S + D S+ +W+ G + L GHT+S+ C+ D L+
Sbjct: 206 SWEPLHANPECRYVASSSKDGSVRIWDTTA--GRCERI--LTGHTQSVTCLRWGGDGLLY 261
Query: 291 SGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAID 329
S S D+TI++WR D C L+GH V +A + D
Sbjct: 262 SASQDRTIKVWRAHD-GVLC-RTLQGHGHWVNTMALSTD 298
Score = 147 (56.8 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 63/213 (29%), Positives = 100/213 (46%)
Query: 14 TLKGHNSYVSSLALAGKF-LYTGS---SDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKG 69
TL+GH +V+++AL+ + L TG+ ++ V D EL + LS N+V G+G
Sbjct: 282 TLQGHGHWVNTMALSTDYALRTGAFEPAEASVNPQDLQGSLQELKERALSRYNLVR-GQG 340
Query: 70 AVKSLVVLADK----LFSAHQDHKIRVWKINNQEPDHQKY----TRLATLPTLGDRAIKL 121
+ LV +D L+S +D K +Q +Q +R+ + D++IKL
Sbjct: 341 PER-LVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASF-DKSIKL 398
Query: 122 LMPKNHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESIT 181
+ + + HV AV +A + D LL S S D T+K+W K +
Sbjct: 399 WDGRTGKYLASLRG-----HVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAMDLP 453
Query: 182 NAHDDAINAVALSDDGD-VYTGSADKKIKVWRR 213
H D + AV S DG V +G DK +++WRR
Sbjct: 454 G-HADEVYAVDWSPDGQRVASGGKDKCLRIWRR 485
Score = 122 (48.0 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 34/120 (28%), Positives = 58/120 (48%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H ++ + + D ++ S S+D++IK+W K L S+ H A+ +A S D +
Sbjct: 371 HQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASL-RGHVAAVYQIAWSADSRLL 429
Query: 201 -TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEK 259
+GS+D +KVW K L L H + A+ S DG + SG D+ + +W +
Sbjct: 430 VSGSSDSTLKVW----DVKAQKLAMDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIWRR 485
Score = 90 (36.7 bits), Expect = 4.2e-18, Sum P(2) = 4.2e-18
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 11 CLTTLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNT 48
C ++L+GH+ V S+A + GK+L +GS D VR WD +T
Sbjct: 106 CTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLST 145
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 193 (73.0 bits), Expect = 9.6e-18, Sum P(2) = 9.6e-18
Identities = 69/218 (31%), Positives = 101/218 (46%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H +V+ L D LLYS S DRTIK+WR D ++ H +N +ALS D +
Sbjct: 245 HTQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTL-QGHGHWVNTMALSTDYALR 302
Query: 201 TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKE 260
TG+ + + + SL ++ ER +S N L L SG+ D ++ +W
Sbjct: 303 TGAFEPAEATVNAQ--DLQGSLKELKERASSRYN-LVRGQGPERLVSGSDDFTLFLWSPA 359
Query: 261 EDDGNILVVGALRGHTKSI--LCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHR 318
ED + + GH I + + S +V S S DK+I++W G Y LA L GH
Sbjct: 360 EDKKPL---ARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKY--LASLRGHV 414
Query: 319 GPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
V +A + D S L+ SGS D +KVW +
Sbjct: 415 AAVYQIAWSAD---------SRLLVSGSSDSTLKVWDV 443
Score = 167 (63.8 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 71/267 (26%), Positives = 121/267 (45%)
Query: 91 RVWKIN-NQEPDHQKYTRLATLPTLGDRAIKLLMPKNHVQIRRHKT--CTWVHHVDAVSA 147
R W ++ + PD +K LA+ G + L P +Q+ R T W+ + +
Sbjct: 156 RHWVLSISWSPDGKK---LASGCKNGQ--VLLWDPSTGLQVGRTLTGHSKWITGL-SWEP 209
Query: 148 LALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSADKK 207
L + + + S S D ++++W T+ +C E I H ++ + DG +Y+ S D+
Sbjct: 210 LHMNPECRYVASSSKDGSVRVWDTTAGRC-ERILTGHTQSVTCLRWGGDGLLYSASQDRT 268
Query: 208 IKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNIL 267
IKVWR G L L+ H +N +ALS D + L +GA + + ++ G++
Sbjct: 269 IKVWRAHDG----VLCRTLQGHGHWVNTMALSTDYA-LRTGAFEPAEATVNAQDLQGSLK 323
Query: 268 VVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAA 327
+ R ++ L + + SGS D T+ +W + LA + GH+ A
Sbjct: 324 ELKE-RASSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKP-LARMTGHQ--------A 373
Query: 328 IDNDRCDSSDTSYLVCSGSLDCDIKVW 354
+ N S D S +V S S D IK+W
Sbjct: 374 LINQVLFSPD-SRIVASASFDKSIKLW 399
Score = 145 (56.1 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 57/219 (26%), Positives = 98/219 (44%)
Query: 121 LLMPKNHVQIRRHKTCT--WVHHVDAVSALALTKDETLLYSVSWDRTIKIW----RTSDF 174
+ P+ ++R CT H +AV ++A + L S S D T++ W T F
Sbjct: 91 IYQPQAVFRVRAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHF 150
Query: 175 KCLESITNAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGI 233
C H + +++ S DG + +G + ++ +W S G + + + +G+
Sbjct: 151 TC-----KGHRHWVLSISWSPDGKKLASGCKNGQVLLWDPSTGLQVGRTLTGHSKWITGL 205
Query: 234 NALALSCDGSVLY--SGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD-LVC 290
+ L + Y S + D S+ VW+ G + L GHT+S+ C+ D L+
Sbjct: 206 SWEPLHMNPECRYVASSSKDGSVRVWDTTA--GRCERI--LTGHTQSVTCLRWGGDGLLY 261
Query: 291 SGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAID 329
S S D+TI++WR D C L+GH V +A + D
Sbjct: 262 SASQDRTIKVWRAHD-GVLC-RTLQGHGHWVNTMALSTD 298
Score = 144 (55.7 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 64/215 (29%), Positives = 103/215 (47%)
Query: 14 TLKGHNSYVSSLALAGKF-LYTGS---SDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKG 69
TL+GH +V+++AL+ + L TG+ ++ V + D EL + S N+V G+G
Sbjct: 282 TLQGHGHWVNTMALSTDYALRTGAFEPAEATVNAQDLQGSLKELKERASSRYNLVR-GQG 340
Query: 70 AVKSLVVLADK----LFSAHQDHKIRVWKINNQEPDHQKY----TRLATLPTLGDRAIKL 121
+ LV +D L+S +D K +Q +Q +R+ + D++IKL
Sbjct: 341 PER-LVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASF-DKSIKL 398
Query: 122 LMPKNHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESIT 181
+ + + HV AV +A + D LL S S D T+K+W D K + T
Sbjct: 399 WDGRTGKYLASLRG-----HVAAVYQIAWSADSRLLVSGSSDSTLKVW---DVKAQKLAT 450
Query: 182 N--AHDDAINAVALSDDGD-VYTGSADKKIKVWRR 213
+ H D + AV S DG V +G DK +++WRR
Sbjct: 451 DLPGHADEVYAVDWSPDGQRVASGGKDKCLRIWRR 485
Score = 142 (55.0 bits), Expect = 9.0e-12, Sum P(2) = 9.0e-12
Identities = 48/150 (32%), Positives = 68/150 (45%)
Query: 157 LYSVSWDRTIKIWRTS-DFKCLESITNAHDDAINAVALSDDGDVY-TGSADKKIKVWRRS 214
L S S D T+ +W + D K L +T H IN V S D + + S DK IK+W
Sbjct: 344 LVSGSDDFTLFLWSPAEDKKPLARMTG-HQALINQVLFSPDSRIVASASFDKSIKLWDGR 402
Query: 215 PGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRG 274
G SL H + + +A S D +L SG+ D ++ VW+ + + L G
Sbjct: 403 TGKYLASL----RGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQK----LATDLPG 454
Query: 275 HTKSILCMAVVSD--LVCSGSADKTIRIWR 302
H + + D V SG DK +RIWR
Sbjct: 455 HADEVYAVDWSPDGQRVASGGKDKCLRIWR 484
Score = 124 (48.7 bits), Expect = 9.8e-10, Sum P(2) = 9.8e-10
Identities = 34/120 (28%), Positives = 58/120 (48%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H ++ + + D ++ S S+D++IK+W K L S+ H A+ +A S D +
Sbjct: 371 HQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASL-RGHVAAVYQIAWSADSRLL 429
Query: 201 -TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEK 259
+GS+D +KVW K L L H + A+ S DG + SG D+ + +W +
Sbjct: 430 VSGSSDSTLKVW----DVKAQKLATDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIWRR 485
Score = 90 (36.7 bits), Expect = 9.6e-18, Sum P(2) = 9.6e-18
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 11 CLTTLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNT 48
C ++L+GH+ V S+A + GK+L +GS D VR WD +T
Sbjct: 106 CTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLST 145
Score = 65 (27.9 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 22/91 (24%), Positives = 41/91 (45%)
Query: 14 TLKGHNSYVSSLALAG-------KFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAV 66
TL GH+ +++ L+ +++ + S D VR WD T + ++ + V
Sbjct: 194 TLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWD--TTAGRCERILTGHTQSVTC 251
Query: 67 GKGAVKSLVVLADKLFSAHQDHKIRVWKINN 97
+ L L+SA QD I+VW+ ++
Sbjct: 252 LRWGGDGL------LYSASQDRTIKVWRAHD 276
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 193 (73.0 bits), Expect = 9.8e-18, Sum P(2) = 9.8e-18
Identities = 69/218 (31%), Positives = 101/218 (46%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H +V+ L D LLYS S DRTIK+WR D ++ H +N +ALS D +
Sbjct: 247 HTQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTL-QGHGHWVNTMALSTDYALR 304
Query: 201 TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKE 260
TG+ + + + SL ++ ER +S N L L SG+ D ++ +W
Sbjct: 305 TGAFEPAEATVNAQ--DLQGSLKELKERASSRYN-LVRGQGPERLVSGSDDFTLFLWSPA 361
Query: 261 EDDGNILVVGALRGHTKSI--LCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHR 318
ED + + GH I + + S +V S S DK+I++W G Y LA L GH
Sbjct: 362 EDKKPL---ARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKY--LASLRGHV 416
Query: 319 GPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
V +A + D S L+ SGS D +KVW +
Sbjct: 417 AAVYQIAWSAD---------SRLLVSGSSDSTLKVWDV 445
Score = 167 (63.8 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 72/267 (26%), Positives = 120/267 (44%)
Query: 91 RVWKIN-NQEPDHQKYTRLATLPTLGDRAIKLLMPKNHVQIRRHKT--CTWVHHVDAVSA 147
R W ++ + PD +K LA+ G I L P Q+ R T W+ + +
Sbjct: 158 RHWVLSISWSPDGKK---LASGCKNGQ--ILLWDPSTGTQVGRTLTGHSKWITGL-SWEP 211
Query: 148 LALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSADKK 207
L + + + S S D ++++W T+ +C E I H ++ + DG +Y+ S D+
Sbjct: 212 LHMNPECRYVASSSKDGSVRVWDTTAGRC-ERILTGHTQSVTCLRWGGDGLLYSASQDRT 270
Query: 208 IKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNIL 267
IKVWR G L L+ H +N +ALS D + L +GA + + ++ G++
Sbjct: 271 IKVWRAHDG----VLCRTLQGHGHWVNTMALSTDYA-LRTGAFEPAEATVNAQDLQGSLK 325
Query: 268 VVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAA 327
+ R ++ L + + SGS D T+ +W + LA + GH+ A
Sbjct: 326 ELKE-RASSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKP-LARMTGHQ--------A 375
Query: 328 IDNDRCDSSDTSYLVCSGSLDCDIKVW 354
+ N S D S +V S S D IK+W
Sbjct: 376 LINQVLFSPD-SRIVASASFDKSIKLW 401
Score = 149 (57.5 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 58/219 (26%), Positives = 98/219 (44%)
Query: 121 LLMPKNHVQIRRHKTCT--WVHHVDAVSALALTKDETLLYSVSWDRTIKIW----RTSDF 174
+ P+ ++R CT H +AV ++A + L S S D T++ W T F
Sbjct: 93 IYQPQAVFRVRAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHF 152
Query: 175 KCLESITNAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGI 233
C H + +++ S DG + +G + +I +W S G + + + +G+
Sbjct: 153 TC-----KGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGTQVGRTLTGHSKWITGL 207
Query: 234 NALALSCDGSVLY--SGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD-LVC 290
+ L + Y S + D S+ VW+ G + L GHT+S+ C+ D L+
Sbjct: 208 SWEPLHMNPECRYVASSSKDGSVRVWDTTA--GRCERI--LTGHTQSVTCLRWGGDGLLY 263
Query: 291 SGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAID 329
S S D+TI++WR D C L+GH V +A + D
Sbjct: 264 SASQDRTIKVWRAHD-GVLC-RTLQGHGHWVNTMALSTD 300
Score = 144 (55.7 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 64/215 (29%), Positives = 103/215 (47%)
Query: 14 TLKGHNSYVSSLALAGKF-LYTGS---SDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKG 69
TL+GH +V+++AL+ + L TG+ ++ V + D EL + S N+V G+G
Sbjct: 284 TLQGHGHWVNTMALSTDYALRTGAFEPAEATVNAQDLQGSLKELKERASSRYNLVR-GQG 342
Query: 70 AVKSLVVLADK----LFSAHQDHKIRVWKINNQEPDHQKY----TRLATLPTLGDRAIKL 121
+ LV +D L+S +D K +Q +Q +R+ + D++IKL
Sbjct: 343 PER-LVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASF-DKSIKL 400
Query: 122 LMPKNHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESIT 181
+ + + HV AV +A + D LL S S D T+K+W D K + T
Sbjct: 401 WDGRTGKYLASLRG-----HVAAVYQIAWSADSRLLVSGSSDSTLKVW---DVKAQKLTT 452
Query: 182 N--AHDDAINAVALSDDGD-VYTGSADKKIKVWRR 213
+ H D + AV S DG V +G DK +++WRR
Sbjct: 453 DLPGHADEVYAVDWSPDGQRVASGGKDKCLRIWRR 487
Score = 142 (55.0 bits), Expect = 9.1e-12, Sum P(2) = 9.1e-12
Identities = 48/150 (32%), Positives = 68/150 (45%)
Query: 157 LYSVSWDRTIKIWRTS-DFKCLESITNAHDDAINAVALSDDGDVY-TGSADKKIKVWRRS 214
L S S D T+ +W + D K L +T H IN V S D + + S DK IK+W
Sbjct: 346 LVSGSDDFTLFLWSPAEDKKPLARMTG-HQALINQVLFSPDSRIVASASFDKSIKLWDGR 404
Query: 215 PGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRG 274
G SL H + + +A S D +L SG+ D ++ VW+ + + L G
Sbjct: 405 TGKYLASL----RGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQK----LTTDLPG 456
Query: 275 HTKSILCMAVVSD--LVCSGSADKTIRIWR 302
H + + D V SG DK +RIWR
Sbjct: 457 HADEVYAVDWSPDGQRVASGGKDKCLRIWR 486
Score = 124 (48.7 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 34/120 (28%), Positives = 58/120 (48%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H ++ + + D ++ S S+D++IK+W K L S+ H A+ +A S D +
Sbjct: 373 HQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASL-RGHVAAVYQIAWSADSRLL 431
Query: 201 -TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEK 259
+GS+D +KVW K L L H + A+ S DG + SG D+ + +W +
Sbjct: 432 VSGSSDSTLKVW----DVKAQKLTTDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIWRR 487
Score = 90 (36.7 bits), Expect = 9.8e-18, Sum P(2) = 9.8e-18
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 11 CLTTLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNT 48
C ++L+GH+ V S+A + GK+L +GS D VR WD +T
Sbjct: 108 CTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLST 147
Score = 65 (27.9 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 22/91 (24%), Positives = 41/91 (45%)
Query: 14 TLKGHNSYVSSLALAG-------KFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAV 66
TL GH+ +++ L+ +++ + S D VR WD T + ++ + V
Sbjct: 196 TLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWD--TTAGRCERILTGHTQSVTC 253
Query: 67 GKGAVKSLVVLADKLFSAHQDHKIRVWKINN 97
+ L L+SA QD I+VW+ ++
Sbjct: 254 LRWGGDGL------LYSASQDRTIKVWRAHD 278
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 242 (90.2 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 84/304 (27%), Positives = 143/304 (47%)
Query: 12 LTTLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKG 69
L TL+GH+ V S+A + GK L + SSD ++ W N+ + EL Q F ++ +
Sbjct: 953 LQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLW--NSTTGELQQTFKGHDLWIR---- 1006
Query: 70 AVKSLVVLADKLFSAHQDHKIRVWKINNQE-----PDHQKYTRLATLPTLGDRAIKLLMP 124
AV + L S D+ I++W + E DH + D+ +
Sbjct: 1007 AV-AFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSP-DDKQLASSSL 1064
Query: 125 KNHVQIRRHKTC----TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESI 180
+ +++ T T H V ++ + D LL S S+D TIK+W + +++
Sbjct: 1065 DSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTL 1124
Query: 181 TNAHDDAINAVALSDDG-DVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALS 239
T D +++VA S DG + +G D IK+W + G L+ LE H+ I ++ S
Sbjct: 1125 TG-RSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGE----LLQTLEGHSDRIQSVVFS 1179
Query: 240 CDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKT 297
DG +L SG+ D++ +W+ G +L + GH+K + +A D L+ S S +T
Sbjct: 1180 PDGKLLASGSYDQTAKLWDPAT--GELLQI--FEGHSKWVESVAFSPDGKLLASSSYGET 1235
Query: 298 IRIW 301
I++W
Sbjct: 1236 IKLW 1239
Score = 240 (89.5 bits), Expect = 3.1e-17, P = 3.1e-17
Identities = 95/339 (28%), Positives = 147/339 (43%)
Query: 12 LTTLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKG 69
L TL GH+ V SLA + GK L +GS DN + WD T EL Q F + +
Sbjct: 785 LQTLDGHSGTVESLAFSPDGKLLASGSYDNTIDLWDSAT--GELLQTFEGHPH------- 835
Query: 70 AVKSLVVLAD--KLFSAHQDHKIRVWKINNQE-----PDHQKYTRLATLPTLG------- 115
++ S+ D +L SA D I++W + E H + R G
Sbjct: 836 SIWSVAFAPDGKELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSS 895
Query: 116 -DRAIKLLMPKN-HVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSD 173
D IK+ P +Q WV V A + D L S S T+K+W +
Sbjct: 896 LDSTIKVWNPATGELQQSLEGRSGWVKSV------AFSPDGKKLASGSEKNTVKLWNPAT 949
Query: 174 FKCLESITNAHDDAINAVALSDDG-DVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSG 232
+ L+++ H ++ +VA S DG + + S+D IK+W + G L + H+
Sbjct: 950 GELLQTL-EGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGE----LQQTFKGHDLW 1004
Query: 233 INALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVC 290
I A+A S DG L SG+ D +I +W+ + + +L H++S+ +A D +
Sbjct: 1005 IRAVAFSPDGKHLVSGSDDNTIKLWDLATSE----LQQSLEDHSRSVHAVAFSPDDKQLA 1060
Query: 291 SGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAID 329
S S D TI++W LEGH V+ + + D
Sbjct: 1061 SSSLDSTIKLWDSATGELQ--RTLEGHSQGVRSVTFSPD 1097
Score = 203 (76.5 bits), Expect = 6.4e-13, P = 6.4e-13
Identities = 60/202 (29%), Positives = 98/202 (48%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDG-DV 199
H V +LA + D LL S S+D TI +W ++ + L++ H +I +VA + DG ++
Sbjct: 791 HSGTVESLAFSPDGKLLASGSYDNTIDLWDSATGELLQTF-EGHPHSIWSVAFAPDGKEL 849
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEK 259
+ S D IK+W + G L L+ H+ + ++A S DG +L S + D +I VW
Sbjct: 850 ASASDDSTIKIWDLATGE----LQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNP 905
Query: 260 EEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRG 319
+ + G G KS+ + + SGS T+++W L LEGH
Sbjct: 906 ATGELQQSLEGR-SGWVKSV-AFSPDGKKLASGSEKNTVKLWNPATGEL--LQTLEGHSQ 961
Query: 320 PVKCLAAAIDNDRC--DSSDTS 339
V+ +A + D + SSDT+
Sbjct: 962 SVRSVAFSPDGKQLASSSSDTT 983
Score = 187 (70.9 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 73/282 (25%), Positives = 129/282 (45%)
Query: 35 GSSDNEVRSWDCNTFSS--ELDQEFLSNNNIVAVGKGAVKSLVVLAD--KLFSAHQDHKI 90
GS + +++ + +S +++Q + + + G V+S+V D +L S D +
Sbjct: 715 GSITRRIFNYNLSGWSQLPKVEQTWSAEQQTLENHLGPVESVVFSPDGKQLVSGSYDDTV 774
Query: 91 RVWKINNQEPDHQKYTRLATLPTLGDRAI-KLLMP---KNHVQIRRHKTC----TWVHHV 142
++W E T+ +L KLL N + + T T+ H
Sbjct: 775 KIWDPATGELLQTLDGHSGTVESLAFSPDGKLLASGSYDNTIDLWDSATGELLQTFEGHP 834
Query: 143 DAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTG 202
++ ++A D L S S D TIKIW + + L+ ++H ++ +VA S DG +
Sbjct: 835 HSIWSVAFAPDGKELASASDDSTIKIWDLATGE-LQQTLDSHSQSVRSVAFSPDGKLLAS 893
Query: 203 SA-DKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEE 261
S+ D IKVW + G + SL E + + ++A S DG L SG+ ++ +W
Sbjct: 894 SSLDSTIKVWNPATGELQQSL----EGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPAT 949
Query: 262 DDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIW 301
G +L L GH++S+ +A D + S S+D TI++W
Sbjct: 950 --GELLQT--LEGHSQSVRSVAFSPDGKQLASSSSDTTIKLW 987
Score = 129 (50.5 bits), Expect = 0.00011, P = 0.00011
Identities = 43/135 (31%), Positives = 62/135 (45%)
Query: 222 LVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILC 281
L+ L+ H+ + +LA S DG +L SG+ D +I +W+ G +L GH SI
Sbjct: 784 LLQTLDGHSGTVESLAFSPDGKLLASGSYDNTIDLWDSAT--GELLQT--FEGHPHSIWS 839
Query: 282 MAVVSD--LVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTS 339
+A D + S S D TI+IW L+ H V+ +A + D
Sbjct: 840 VAFAPDGKELASASDDSTIKIWDLATGELQ--QTLDSHSQSVRSVAFSPDGK-------- 889
Query: 340 YLVCSGSLDCDIKVW 354
L+ S SLD IKVW
Sbjct: 890 -LLASSSLDSTIKVW 903
Score = 126 (49.4 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 48/183 (26%), Positives = 84/183 (45%)
Query: 177 LESITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINAL 236
L+ ++H ++ +VA S DG + S+ + +P + L LE + + ++
Sbjct: 868 LQQTLDSHSQSVRSVAFSPDGKLLASSSLDST-IKVWNPATGE--LQQSLEGRSGWVKSV 924
Query: 237 ALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSA 294
A S DG L SG+ ++ +W G +L L GH++S+ +A D + S S+
Sbjct: 925 AFSPDGKKLASGSEKNTVKLWNPAT--GELLQT--LEGHSQSVRSVAFSPDGKQLASSSS 980
Query: 295 DKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVW 354
D TI++W +GH ++ +A S D +LV SGS D IK+W
Sbjct: 981 DTTIKLWNSTTGELQ--QTFKGHDLWIRAVAF--------SPDGKHLV-SGSDDNTIKLW 1029
Query: 355 QIS 357
++
Sbjct: 1030 DLA 1032
Score = 125 (49.1 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 42/139 (30%), Positives = 67/139 (48%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H D + ++ + D LL S S+D+T K+W + + L+ I H + +VA S DG +
Sbjct: 1169 HSDRIQSVVFSPDGKLLASGSYDQTAKLWDPATGELLQ-IFEGHSKWVESVAFSPDGKLL 1227
Query: 201 TGSA-DKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYS-GACDRSIIVWE 258
S+ + IK+W G L+ L + ++A S DG+ L S D I W+
Sbjct: 1228 ASSSYGETIKLWDPVTGE----LLQTLNDPDESAGSVAFSPDGNRLASVDIFDTKI--WD 1281
Query: 259 KEEDDGNILVVGALRGHTK 277
G +L AL+GH+K
Sbjct: 1282 PAT--GELLQ--ALKGHSK 1296
Score = 119 (46.9 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 49/170 (28%), Positives = 76/170 (44%)
Query: 188 INAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYS 247
+ +VA S DG ++K V +P + L+ LE H+ + ++A S DG L S
Sbjct: 921 VKSVAFSPDGKKLASGSEKNT-VKLWNPATGE--LLQTLEGHSQSVRSVAFSPDGKQLAS 977
Query: 248 GACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIWRGID 305
+ D +I +W + + +GH I +A D + SGS D TI++W D
Sbjct: 978 SSSDTTIKLWNSTTGE----LQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLW---D 1030
Query: 306 RNYTCLAV-LEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVW 354
+ L LE H V +A + D+ + SS SLD IK+W
Sbjct: 1031 LATSELQQSLEDHSRSVHAVAFSPDDKQLASS---------SLDSTIKLW 1071
Score = 106 (42.4 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 43/178 (24%), Positives = 72/178 (40%)
Query: 177 LESITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINAL 236
L+ H +++AVA S D D S+ + + + L LE H+ G+ ++
Sbjct: 1036 LQQSLEDHSRSVHAVAFSPD-DKQLASSSLDSTI--KLWDSATGELQRTLEGHSQGVRSV 1092
Query: 237 ALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADK 296
S DG +L S + D +I +W + + G R + + + SG D
Sbjct: 1093 TFSPDGKLLASNSYDGTIKLWNPLTGELQQTLTG--RSDWVDSVAFSPDGKQLASGYYDS 1150
Query: 297 TIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVW 354
TI++W L LEGH ++ + + D L+ SGS D K+W
Sbjct: 1151 TIKLWDSATGEL--LQTLEGHSDRIQSVVFSPDGK---------LLASGSYDQTAKLW 1197
Score = 68 (29.0 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 30/84 (35%), Positives = 41/84 (48%)
Query: 14 TLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAV 71
TL+ H V S+ + GK L +GS D+ V+ WD T EL Q L ++ G V
Sbjct: 745 TLENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPAT--GELLQT-LDGHS------GTV 795
Query: 72 KSLVVLAD-KLF-SAHQDHKIRVW 93
+SL D KL S D+ I +W
Sbjct: 796 ESLAFSPDGKLLASGSYDNTIDLW 819
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 189 (71.6 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
Identities = 70/223 (31%), Positives = 104/223 (46%)
Query: 137 TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDD 196
T H +V+ L D LLYS S DRTIK+WR D ++ H +N +ALS D
Sbjct: 242 TLTGHAQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTL-QGHGHWVNTMALSTD 299
Query: 197 GDVYTGSADK-KIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSII 255
+ TG+ + + V + + + SL ++ ER S N L L SG+ D ++
Sbjct: 300 YALRTGAFEPAEASV---NAQDLRGSLQELKERALSRYN-LVRGQGPERLVSGSDDFTLF 355
Query: 256 VWEKEEDDGNILVVGALRGHTKSI--LCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAV 313
+W ED + + GH I + + S ++ S S DK+I++W G Y LA
Sbjct: 356 LWSPAEDKKPL---ARMTGHQALINQVVFSPDSRVIASASFDKSIKLWDGRTGKY--LAS 410
Query: 314 LEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
L GH V +A + D S L+ SGS D +KVW +
Sbjct: 411 LRGHVAAVYQIAWSAD---------SRLLVSGSSDSTLKVWDV 444
Score = 159 (61.0 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 78/309 (25%), Positives = 126/309 (40%)
Query: 15 LKGHNSYVSSLALAG-------KFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVG 67
L GH+ ++++L+ +++ + S D VR WD T + ++ + V
Sbjct: 196 LTGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWD--TTAGRCERTLTGHAQSVTCL 253
Query: 68 KGAVKSLVVLADKLFSAHQDHKIRVWKINNQE-----PDHQKYTRLATLPTLGDRAIKL- 121
+ L L+SA QD I+VW+ ++ H + L T D A++
Sbjct: 254 RWGGDGL------LYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALST--DYALRTG 305
Query: 122 LMPKNHVQIRRHKTCTWVHHVD--AVSALALTKDE--TLLYSVSWDRTIKIWRTS-DFKC 176
+ + + A+S L + + L S S D T+ +W + D K
Sbjct: 306 AFEPAEASVNAQDLRGSLQELKERALSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKP 365
Query: 177 LESITNAHDDAINAVALSDDGDVY-TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINA 235
L +T H IN V S D V + S DK IK+W G SL H + +
Sbjct: 366 LARMTG-HQALINQVVFSPDSRVIASASFDKSIKLWDGRTGKYLASL----RGHVAAVYQ 420
Query: 236 LALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGS 293
+A S D +L SG+ D ++ VW+ + + L GH + + D V SG
Sbjct: 421 IAWSADSRLLVSGSSDSTLKVWDVKAQK----LSTDLPGHADEVYAVDWSPDGQRVASGG 476
Query: 294 ADKTIRIWR 302
DK +RIWR
Sbjct: 477 KDKCLRIWR 485
Score = 153 (58.9 bits), Expect = 4.9e-13, Sum P(2) = 4.9e-13
Identities = 54/196 (27%), Positives = 93/196 (47%)
Query: 159 SVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNK 218
S S D ++++W T+ +C ++T H ++ + DG +Y+ S D+ IKVWR G
Sbjct: 222 SSSKDGSVRVWDTTAGRCERTLTG-HAQSVTCLRWGGDGLLYSASQDRTIKVWRAHDG-- 278
Query: 219 KHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKS 278
L L+ H +N +ALS D + L +GA + + ++ G++ + R ++
Sbjct: 279 --VLCRTLQGHGHWVNTMALSTDYA-LRTGAFEPAEASVNAQDLRGSLQELKE-RALSRY 334
Query: 279 ILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDT 338
L + + SGS D T+ +W + LA + GH+ A+ N S D
Sbjct: 335 NLVRGQGPERLVSGSDDFTLFLWSPAEDKKP-LARMTGHQ--------ALINQVVFSPD- 384
Query: 339 SYLVCSGSLDCDIKVW 354
S ++ S S D IK+W
Sbjct: 385 SRVIASASFDKSIKLW 400
Score = 149 (57.5 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 64/213 (30%), Positives = 102/213 (47%)
Query: 14 TLKGHNSYVSSLALAGKF-LYTGS---SDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKG 69
TL+GH +V+++AL+ + L TG+ ++ V + D EL + LS N+V G+G
Sbjct: 283 TLQGHGHWVNTMALSTDYALRTGAFEPAEASVNAQDLRGSLQELKERALSRYNLVR-GQG 341
Query: 70 AVKSLVVLADK----LFSAHQDHKIRVWKINNQEPDHQKY----TRLATLPTLGDRAIKL 121
+ LV +D L+S +D K +Q +Q +R+ + D++IKL
Sbjct: 342 PER-LVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVVFSPDSRVIASASF-DKSIKL 399
Query: 122 LMPKNHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESIT 181
+ + + HV AV +A + D LL S S D T+K+W K L +
Sbjct: 400 WDGRTGKYLASLRG-----HVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQK-LSTDL 453
Query: 182 NAHDDAINAVALSDDGD-VYTGSADKKIKVWRR 213
H D + AV S DG V +G DK +++WRR
Sbjct: 454 PGHADEVYAVDWSPDGQRVASGGKDKCLRIWRR 486
Score = 147 (56.8 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 61/222 (27%), Positives = 98/222 (44%)
Query: 121 LLMPKNHVQIRRHKTCT--WVHHVDAVSALALTKDETLLYSVSWDRTIKIW----RTSDF 174
+ P+ ++R CT H +AV ++A + L S S D T++ W T F
Sbjct: 92 IYQPQAIFRVRAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHF 151
Query: 175 KCLESITNAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGI 233
C H + +++ S DG + +G + +I +W S G + + L H+ I
Sbjct: 152 TC-----QGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGKQ---VGRALTGHSKWI 203
Query: 234 NALA---LSCDGSVLY--SGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD- 287
AL+ L + Y S + D S+ VW+ G L GH +S+ C+ D
Sbjct: 204 TALSWEPLHANPECRYVASSSKDGSVRVWDTTA--GRC--ERTLTGHAQSVTCLRWGGDG 259
Query: 288 LVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAID 329
L+ S S D+TI++WR D C L+GH V +A + D
Sbjct: 260 LLYSASQDRTIKVWRAHD-GVLC-RTLQGHGHWVNTMALSTD 299
Score = 90 (36.7 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 11 CLTTLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNT 48
C ++L+GH+ V S+A + GK+L +GS D VR WD +T
Sbjct: 107 CTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLST 146
>ZFIN|ZDB-GENE-030131-6305 [details] [associations]
symbol:fbxw11a "F-box and WD-40 domain protein
11a" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-030131-6305 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
HSSP:Q9Y297 GeneTree:ENSGT00690000101849 EMBL:CABZ01001943
EMBL:CABZ01001944 EMBL:CABZ01001945 EMBL:CABZ01001946 EMBL:BC045356
IPI:IPI00502564 RefSeq:NP_958467.1 UniGene:Dr.78612 SMR:Q7ZVZ1
STRING:Q7ZVZ1 Ensembl:ENSDART00000036901 GeneID:334373
KEGG:dre:334373 CTD:334373 OMA:MESQINT NextBio:20810369
Uniprot:Q7ZVZ1
Length = 527
Score = 234 (87.4 bits), Expect = 3.3e-17, P = 3.3e-17
Identities = 70/215 (32%), Positives = 105/215 (48%)
Query: 146 SALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSAD 205
S L L DE ++ + S D T+++W S + L ++ + H++A+ + + G + T S D
Sbjct: 267 SVLCLQYDERVIVTGSSDSTVRVWDVSSGEVLNTLIH-HNEAVLHLRFCN-GLMVTCSKD 324
Query: 206 KKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGN 265
+ I VW + SL VL H + +N + D + S + DR+I VW +
Sbjct: 325 RSIAVWDMASATDI-SLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCE-- 379
Query: 266 ILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLA 325
V L GH + I C+ LV SGS+D TIR+W I+ CL VLEGH V+C+
Sbjct: 380 --FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW-DIECG-ACLRVLEGHEELVRCIR 435
Query: 326 AAIDNDRCDSSDTSYLVCSGSLDCDIKVWQISFPL 360
DN R + SG+ D IKVW + L
Sbjct: 436 --FDNKR---------IVSGAYDGKIKVWDLQAAL 459
Score = 175 (66.7 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 50/177 (28%), Positives = 86/177 (48%)
Query: 150 LTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSADKKIK 209
L D+ + S D +IKIW +CL+ +T H ++ + D+ + TGS+D ++
Sbjct: 231 LQYDDDKIISGLRDNSIKIWDKQSLECLKVLTG-HTGSVLCLQY-DERVIVTGSSDSTVR 288
Query: 210 VWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVV 269
VW S G ++L+ HN + L C+G ++ + + DRSI VW+ +I +
Sbjct: 289 VWDVSSGEVLNTLI----HHNEAVLHLRF-CNG-LMVTCSKDRSIAVWDMASAT-DISLR 341
Query: 270 GALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTC--LAVLEGHRGPVKCL 324
L GH ++ + + S S D+TI++W TC + L GH+ + CL
Sbjct: 342 RVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWS----TSTCEFVRTLNGHKRGIACL 394
Score = 157 (60.3 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 60/195 (30%), Positives = 87/195 (44%)
Query: 137 TWVHHVDAVSALALTKDETLLYSVSWDRTIKIW---RTSDFKCLESITNAHDDAINAVAL 193
T +HH +AV L L+ + S DR+I +W +D L + H A+N V
Sbjct: 300 TLIHHNEAVLHLRFCNG--LMVTCSKDRSIAVWDMASATDIS-LRRVLVGHRAAVNVVDF 356
Query: 194 SDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRS 253
DD + + S D+ IKVW S V L H GI L D V+ SG+ D +
Sbjct: 357 -DDKYIVSASGDRTIKVWSTSTCE----FVRTLNGHKRGIACLQYR-DRLVV-SGSSDNT 409
Query: 254 IIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIW---RGID----R 306
I +W+ E G L V L GH + + C+ + + SG+ D I++W +D
Sbjct: 410 IRLWDIE--CGACLRV--LEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPA 465
Query: 307 NYTCLAVLEGHRGPV 321
+ CL L H G V
Sbjct: 466 STLCLRTLVEHSGRV 480
Score = 150 (57.9 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 66/260 (25%), Positives = 108/260 (41%)
Query: 11 CLTTLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGA 70
CL L GH V L + + TGSSD+ VR WD + S E+ + +N V +
Sbjct: 257 CLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVS--SGEVLNTLIHHNEAV-LHLRF 313
Query: 71 VKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYT----RLAT-LPTLGDRAIKLLMPK 125
L+V K D I VW + + + R A + D+ I
Sbjct: 314 CNGLMVTCSK------DRSIAVWDMASATDISLRRVLVGHRAAVNVVDFDDKYIVSASGD 367
Query: 126 NHVQIRRHKTCTWVHHVDAVS-ALA-LTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA 183
+++ TC +V ++ +A L + L+ S S D TI++W CL +
Sbjct: 368 RTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLR-VLEG 426
Query: 184 HDDAINAVALSDDGDVYTGSADKKIKVW----RRSPGNKKHSL-VDVLERHNSGINALAL 238
H++ + + D+ + +G+ D KIKVW P +L + L H SG L
Sbjct: 427 HEELVRCIRF-DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEH-SG-RVFRL 483
Query: 239 SCDGSVLYSGACDRSIIVWE 258
D + S + D +I++W+
Sbjct: 484 QFDEFQIISSSHDDTILIWD 503
Score = 147 (56.8 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 69/288 (23%), Positives = 119/288 (41%)
Query: 32 LYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAVKSLVVLADKLFSAHQDHKIR 91
+ +G DN ++ WD ++ L ++ G+V L + + D +R
Sbjct: 238 IISGLRDNSIKIWD---------KQSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVR 288
Query: 92 VWKIN-----------NQEPDHQKYTRLATLPTLGDRAIKL--LMPKNHVQIRRHKTCTW 138
VW ++ N+ H ++ + DR+I + + + +RR
Sbjct: 289 VWDVSSGEVLNTLIHHNEAVLHLRFCNGLMVTCSKDRSIAVWDMASATDISLRR----VL 344
Query: 139 VHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD 198
V H AV+ + D+ + S S DRTIK+W TS + + ++ N H I + D
Sbjct: 345 VGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTL-NGHKRGIACLQYRDRL- 400
Query: 199 VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWE 258
V +GS+D I++W G + + VLE H + + D + SGA D I VW+
Sbjct: 401 VVSGSSDNTIRLWDIECG----ACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWD 454
Query: 259 KEE--DD---GNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIW 301
+ D + L + L H+ + + + S S D TI IW
Sbjct: 455 LQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIW 502
Score = 121 (47.7 bits), Expect = 0.00024, P = 0.00024
Identities = 25/83 (30%), Positives = 44/83 (53%)
Query: 219 KHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKS 278
+H+L + R + L D + SG D SI +W+K+ ++ + L GHT S
Sbjct: 212 RHNLQRIQCRSENSKGVYCLQYDDDKIISGLRDNSIKIWDKQ----SLECLKVLTGHTGS 267
Query: 279 ILCMAVVSDLVCSGSADKTIRIW 301
+LC+ ++ +GS+D T+R+W
Sbjct: 268 VLCLQYDERVIVTGSSDSTVRVW 290
>POMBASE|SPAC57A10.05c [details] [associations]
symbol:pof1 "F-box/WD repeat protein protein Pof1"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IPI]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IPI] [GO:0071276 "cellular
response to cadmium ion" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 PomBase:SPAC57A10.05c
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071276 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0042787
HOGENOM:HOG000166480 KO:K10259 OrthoDB:EOG496313 EMBL:AB032410
PIR:T38932 RefSeq:NP_593310.1 ProteinModelPortal:P87053
IntAct:P87053 STRING:P87053 EnsemblFungi:SPAC57A10.05c.1
GeneID:2542914 KEGG:spo:SPAC57A10.05c NextBio:20803951
Uniprot:P87053
Length = 605
Score = 235 (87.8 bits), Expect = 3.4e-17, P = 3.4e-17
Identities = 72/230 (31%), Positives = 110/230 (47%)
Query: 132 RHKTCTWV---HHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAI 188
RH C V H D V L L ++ +L S S+D TI++W + F+ + ++ H +
Sbjct: 260 RHGRCRQVVLSGHSDGVMCLQLVRN--ILASGSYDATIRLWNLATFQQV-ALLEGHSSGV 316
Query: 189 NAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSG 248
+ D + +GS DK I++W + + +L H + L L+ D ++L SG
Sbjct: 317 TCLQF-DQCKLISGSMDKTIRIWNY----RTSECISILHGHTDSV--LCLTFDSTLLVSG 369
Query: 249 ACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIWRGIDR 306
+ D ++ +W G + LRGHT + + ++ D LV SGS D TI+IW ++
Sbjct: 370 SADCTVKLWHFS--GGKRIT---LRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIW-SLET 423
Query: 307 NYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
N TCL H GPV+ LA A D+ CS LD IK W I
Sbjct: 424 N-TCLHTFSAHIGPVQSLALA---------DSRLFSCS--LDGTIKQWDI 461
Score = 202 (76.2 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 61/190 (32%), Positives = 92/190 (48%)
Query: 169 WRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLER 228
WR +C + + + H D + + L + + +GS D I++W + + V +LE
Sbjct: 259 WRHG--RCRQVVLSGHSDGVMCLQLVRN-ILASGSYDATIRLWNLATFQQ----VALLEG 311
Query: 229 HNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDL 288
H+SG+ L D L SG+ D++I +W + + L GHT S+LC+ S L
Sbjct: 312 HSSGVTCLQF--DQCKLISGSMDKTIRIWNYRTSE----CISILHGHTDSVLCLTFDSTL 365
Query: 289 VCSGSADKTIRIWR--GIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGS 346
+ SGSAD T+++W G R L GH GPV + I DR LV SGS
Sbjct: 366 LVSGSADCTVKLWHFSGGKR-----ITLRGHTGPVN--SVRIIRDRG-------LVLSGS 411
Query: 347 LDCDIKVWQI 356
D IK+W +
Sbjct: 412 DDSTIKIWSL 421
Score = 184 (69.8 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 73/261 (27%), Positives = 116/261 (44%)
Query: 71 VKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLGDRAIKLL---MPKNH 127
V L ++ + L S D IR+W + + + + L KL+ M K
Sbjct: 276 VMCLQLVRNILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQFDQCKLISGSMDKT- 334
Query: 128 VQIRRHKT--CTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHD 185
++I ++T C + H S L LT D TLL S S D T+K+W S K + H
Sbjct: 335 IRIWNYRTSECISILHGHTDSVLCLTFDSTLLVSGSADCTVKLWHFSGGKRIT--LRGHT 392
Query: 186 DAINAVAL-SDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSV 244
+N+V + D G V +GS D IK+W H+ H + +LAL+ D S
Sbjct: 393 GPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTF----SAHIGPVQSLALA-D-SR 446
Query: 245 LYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGI 304
L+S + D +I W+ E+ V L GH + + +A + SG+ D +++W
Sbjct: 447 LFSCSLDGTIKQWDIEKKK----CVHTLFGHIEGVWEIAADHLRLISGAHDGVVKVWEAC 502
Query: 305 DRNYTCLAVLEGHRGPVKCLA 325
+ C+ L+ H PV +A
Sbjct: 503 E----CVHTLKNHSEPVTSVA 519
Score = 161 (61.7 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 70/249 (28%), Positives = 102/249 (40%)
Query: 15 LKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAVKSL 74
L GH+ V L L L +GS D +R W+ TF Q L + V L
Sbjct: 269 LSGHSDGVMCLQLVRNILASGSYDATIRLWNLATFQ----QVALLEGH-----SSGVTCL 319
Query: 75 VVLADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLGDRAIKLLMPKNHVQIRR-H 133
KL S D IR+W E + ++ L + L+ ++ H
Sbjct: 320 QFDQCKLISGSMDKTIRIWNYRTSECISILHGHTDSVLCLTFDSTLLVSGSADCTVKLWH 379
Query: 134 ----KTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAIN 189
K T H V+++ + +D L+ S S D TIKIW CL + + AH +
Sbjct: 380 FSGGKRITLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTFS-AHIGPVQ 438
Query: 190 AVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGA 249
++AL+D +++ S D IK W +K V L H G+ +A D L SGA
Sbjct: 439 SLALADSR-LFSCSLDGTIKQW----DIEKKKCVHTLFGHIEGVWEIA--ADHLRLISGA 491
Query: 250 CDRSIIVWE 258
D + VWE
Sbjct: 492 HDGVVKVWE 500
Score = 155 (59.6 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 53/168 (31%), Positives = 79/168 (47%)
Query: 134 KTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVAL 193
K T H V+++ + +D L+ S S D TIKIW CL + + AH + ++AL
Sbjct: 384 KRITLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTFS-AHIGPVQSLAL 442
Query: 194 SDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRS 253
+D +++ S D IK W +K V L H G+ +A D L SGA D
Sbjct: 443 ADSR-LFSCSLDGTIKQW----DIEKKKCVHTLFGHIEGVWEIA--ADHLRLISGAHDGV 495
Query: 254 IIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIW 301
+ VWE E V L+ H++ + +A+ V SGS D I +W
Sbjct: 496 VKVWEACE------CVHTLKNHSEPVTSVALGDCEVVSGSEDGKIYLW 537
Score = 146 (56.5 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 53/210 (25%), Positives = 88/210 (41%)
Query: 11 CLTTLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGK-G 69
C++ L GH V L L +GS+D V+ W F I G G
Sbjct: 345 CISILHGHTDSVLCLTFDSTLLVSGSADCTVKLW-----------HFSGGKRITLRGHTG 393
Query: 70 AVKSLVVLADK--LFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLGDRAIKLLMPKNH 127
V S+ ++ D+ + S D I++W + H + + +L +L
Sbjct: 394 PVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTFSAHIGPVQSLALADSRLFSCSLD 453
Query: 128 VQIRR----HKTC--TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESIT 181
I++ K C T H++ V +A D L S + D +K+W + C+ ++
Sbjct: 454 GTIKQWDIEKKKCVHTLFGHIEGVWEIAA--DHLRLISGAHDGVVKVWEACE--CVHTLK 509
Query: 182 NAHDDAINAVALSDDGDVYTGSADKKIKVW 211
N H + + +VAL D +V +GS D KI +W
Sbjct: 510 N-HSEPVTSVALGDC-EVVSGSEDGKIYLW 537
Score = 140 (54.3 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 34/89 (38%), Positives = 46/89 (51%)
Query: 269 VGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAI 328
V L GH+ + C+ + SGS DKTIRIW R C+++L GH V CL
Sbjct: 306 VALLEGHSSGVTCLQFDQCKLISGSMDKTIRIWNY--RTSECISILHGHTDSVLCL---- 359
Query: 329 DNDRCDSSDTSYLVCSGSLDCDIKVWQIS 357
+ D++ LV SGS DC +K+W S
Sbjct: 360 ------TFDSTLLV-SGSADCTVKLWHFS 381
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 241 (89.9 bits), Expect = 3.5e-17, P = 3.5e-17
Identities = 98/360 (27%), Positives = 159/360 (44%)
Query: 16 KGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAVKS 73
KGH+ V S++ + + L + S D V+ WD T +S L Q L +N VKS
Sbjct: 260 KGHDRAVGSVSFSHDSRLLASASGDGTVKIWD--TATSFL-QNTLEGHN------EWVKS 310
Query: 74 LVVLADK--LFSAHQDHKIRVW-----------KINNQEPDHQKYTRLATLPTLG--DRA 118
+V D L SA D +++W K +N ++ + L G DR
Sbjct: 311 VVFSHDSRLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRT 370
Query: 119 IKLLMPKNHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLE 178
+++ + + RH T+ H D+V A++ D L S S +KIW T L+
Sbjct: 371 VRIW--ETTTGLLRH---TFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGS-LQ 424
Query: 179 SITNAHDDAINAVALSDDGDVY-TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALA 237
++ HDD +N+V+ S D + + S D+ +K+W + G SL LE HN + ++
Sbjct: 425 NVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATG----SLQRTLEGHNDWVRSVV 480
Query: 238 LSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSAD 295
S D ++ S + D ++ +W D + + L H + + D L+ S S D
Sbjct: 481 FSHDSRLIASASDDMTVKIW----DTATVPLQNNLESHDNWVRSVVFSHDSRLLASASDD 536
Query: 296 KTIRIWRGIDRNYTCLA-VLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVW 354
T++IW D L LEGH V ++ + D S L+ S S D +K+W
Sbjct: 537 MTVKIW---DTATGSLENTLEGHDDRVNSVSFSPD---------SRLLASASDDGTVKIW 584
Score = 228 (85.3 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 78/304 (25%), Positives = 142/304 (46%)
Query: 14 TLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAV 71
TL+GHN +V S+ + + L + S D V+ WD T + L Q L +N +V
Sbjct: 300 TLEGHNEWVKSVVFSHDSRLLASASDDGTVKIWD--TATGTL-QRMLKGHN------DSV 350
Query: 72 KSLVVLADK--LFSAHQDHKIRVWK-----INNQEPDHQKYTRLATLPTLGDRAIKLLMP 124
+S+V D + S D +R+W+ + + DH+ +A R +
Sbjct: 351 RSVVFSHDSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSV-MAVSFAHDSRRLASASD 409
Query: 125 KNHVQIRRHKTCTWVH----HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESI 180
+V+I +T + + H D V++++ + D LL S S DRT+KIW + L+
Sbjct: 410 GGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGS-LQRT 468
Query: 181 TNAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALS 239
H+D + +V S D + + S D +K+W + +++L E H++ + ++ S
Sbjct: 469 LEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTATVPLQNNL----ESHDNWVRSVVFS 524
Query: 240 CDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKT 297
D +L S + D ++ +W+ G++ L GH + ++ D L+ S S D T
Sbjct: 525 HDSRLLASASDDMTVKIWDTAT--GSL--ENTLEGHDDRVNSVSFSPDSRLLASASDDGT 580
Query: 298 IRIW 301
++IW
Sbjct: 581 VKIW 584
Score = 204 (76.9 bits), Expect = 7.3e-13, P = 7.3e-13
Identities = 77/299 (25%), Positives = 129/299 (43%)
Query: 15 LKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAVK 72
LKGHN V S+ + + + +GS+D VR W+ T L F + + V AV
Sbjct: 343 LKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTT--GLLRHTFEDHEDSVM----AV- 395
Query: 73 SLVVLADKLFSAHQDHKIRVW-----KINNQEPDHQKYTRLATLPTLGDRAIKLLMPKNH 127
S + +L SA +++W + N H + R +
Sbjct: 396 SFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSP-DSRLLASASDDRT 454
Query: 128 VQIRRHKTC----TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA 183
V+I T T H D V ++ + D L+ S S D T+KIW T+ L++ +
Sbjct: 455 VKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTATVP-LQNNLES 513
Query: 184 HDDAINAVALSDDGDVY-TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDG 242
HD+ + +V S D + + S D +K+W + G SL + LE H+ +N+++ S D
Sbjct: 514 HDNWVRSVVFSHDSRLLASASDDMTVKIWDTATG----SLENTLEGHDDRVNSVSFSPDS 569
Query: 243 SVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIW 301
+L S + D ++ +W G+ G L + S+L+ S D T++IW
Sbjct: 570 RLLASASDDGTVKIWYAATGTVQHTFDGS--GRVAISLAFSHTSNLLASAMDDGTVKIW 626
Score = 154 (59.3 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 64/261 (24%), Positives = 111/261 (42%)
Query: 14 TLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAV 71
T + H V +++ A + L + S V+ WD T S + N++ V
Sbjct: 384 TFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQ---------NVLEGHDDCV 434
Query: 72 KSLVVLADK--LFSAHQDHKIRVW-----KINNQEPDHQKYTRLATLPTLGDRAIKLLMP 124
S+ D L SA D +++W + H + R + R I
Sbjct: 435 NSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVF-SHDSRLIASASD 493
Query: 125 KNHVQIRRHKTCTWVHHVDA----VSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESI 180
V+I T +++++ V ++ + D LL S S D T+KIW T+ LE+
Sbjct: 494 DMTVKIWDTATVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTATGS-LENT 552
Query: 181 TNAHDDAINAVALSDDGDVYTGSADK-KIKVWRRSPGNKKHSLVDVLERHNSGINALALS 239
HDD +N+V+ S D + ++D +K+W + G +H+ D R I+ LA S
Sbjct: 553 LEGHDDRVNSVSFSPDSRLLASASDDGTVKIWYAATGTVQHTF-DGSGR--VAIS-LAFS 608
Query: 240 CDGSVLYSGACDRSIIVWEKE 260
++L S D ++ +W+ E
Sbjct: 609 HTSNLLASAMDDGTVKIWDME 629
>UNIPROTKB|F1P5E8 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AADN02035964
EMBL:AADN02035965 EMBL:AADN02035966 IPI:IPI00735168
Ensembl:ENSGALT00000003489 ArrayExpress:F1P5E8 Uniprot:F1P5E8
Length = 515
Score = 233 (87.1 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 71/216 (32%), Positives = 108/216 (50%)
Query: 146 SALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSAD 205
S L L DE ++ + S D T+++W + + L ++ + H++A+ + S+ G + T S D
Sbjct: 255 SVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIH-HNEAVLHLRFSN-GLMVTCSKD 312
Query: 206 KKIKVW-RRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDG 264
+ I VW SP + +L VL H + +N + D + S + DR+I VW +
Sbjct: 313 RSIAVWDMASPTDI--TLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCE- 367
Query: 265 NILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCL 324
V L GH + I C+ LV SGS+D TIR+W I+ CL VLEGH V+C+
Sbjct: 368 ---FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW-DIECG-ACLRVLEGHEELVRCI 422
Query: 325 AAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQISFPL 360
DN R + SG+ D IKVW + L
Sbjct: 423 R--FDNKR---------IVSGAYDGKIKVWDLQAAL 447
Score = 171 (65.3 bits), Expect = 6.2e-10, P = 6.2e-10
Identities = 47/174 (27%), Positives = 85/174 (48%)
Query: 153 DETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSADKKIKVWR 212
DE ++ + D +IKIW + +CL+ +T H ++ + D+ + TGS+D ++VW
Sbjct: 223 DEKIISGLR-DNSIKIWDKTSLECLKVLTG-HTGSVLCLQY-DERVIVTGSSDSTVRVWD 279
Query: 213 RSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGAL 272
+ G ++L+ HN + L L ++ + + DRSI VW+ +I + L
Sbjct: 280 VNTGEVLNTLI----HHNEAV--LHLRFSNGLMVTCSKDRSIAVWDMASPT-DITLRRVL 332
Query: 273 RGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTC--LAVLEGHRGPVKCL 324
GH ++ + + S S D+TI++W TC + L GH+ + CL
Sbjct: 333 VGHRAAVNVVDFDDKYIVSASGDRTIKVWS----TSTCEFVRTLNGHKRGIACL 382
Score = 158 (60.7 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 61/195 (31%), Positives = 88/195 (45%)
Query: 137 TWVHHVDAVSALALTKDETLLYSVSWDRTIKIW---RTSDFKCLESITNAHDDAINAVAL 193
T +HH +AV L L L+ + S DR+I +W +D L + H A+N V
Sbjct: 288 TLIHHNEAV--LHLRFSNGLMVTCSKDRSIAVWDMASPTDIT-LRRVLVGHRAAVNVVDF 344
Query: 194 SDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRS 253
DD + + S D+ IKVW S V L H GI L D V+ SG+ D +
Sbjct: 345 -DDKYIVSASGDRTIKVWSTSTCE----FVRTLNGHKRGIACLQYR-DRLVV-SGSSDNT 397
Query: 254 IIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIW---RGID----R 306
I +W+ E G L V L GH + + C+ + + SG+ D I++W +D
Sbjct: 398 IRLWDIE--CGACLRV--LEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPA 453
Query: 307 NYTCLAVLEGHRGPV 321
+ CL L H G V
Sbjct: 454 STLCLRTLVEHSGRV 468
Score = 155 (59.6 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 67/260 (25%), Positives = 109/260 (41%)
Query: 11 CLTTLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGA 70
CL L GH V L + + TGSSD+ VR WD NT E+ + +N V + +
Sbjct: 245 CLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNT--GEVLNTLIHHNEAVLHLRFS 302
Query: 71 VKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYT----RLAT-LPTLGDRAIKLLMPK 125
L+V K D I VW + + + R A + D+ I
Sbjct: 303 -NGLMVTCSK------DRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGD 355
Query: 126 NHVQIRRHKTCTWVHHVDAVS-ALA-LTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA 183
+++ TC +V ++ +A L + L+ S S D TI++W CL +
Sbjct: 356 RTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLR-VLEG 414
Query: 184 HDDAINAVALSDDGDVYTGSADKKIKVW----RRSPGNKKHSL-VDVLERHNSGINALAL 238
H++ + + D+ + +G+ D KIKVW P +L + L H SG L
Sbjct: 415 HEELVRCIRF-DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEH-SG-RVFRL 471
Query: 239 SCDGSVLYSGACDRSIIVWE 258
D + S + D +I++W+
Sbjct: 472 QFDEFQIISSSHDDTILIWD 491
Score = 153 (58.9 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 79/320 (24%), Positives = 132/320 (41%)
Query: 1 QHNLSVVDHHCLTTLKGHNSY-VSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLS 59
+HNL + C + NS V L + + +G DN ++ WD + E L
Sbjct: 200 RHNLQRIQ--C----RSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSL------ECLK 247
Query: 60 NNNIVAVGKGAVKSLVVLADKLFSAHQDHKIRVWKIN-----------NQEPDHQKYTRL 108
++ G+V L + + D +RVW +N N+ H +++
Sbjct: 248 ---VLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG 304
Query: 109 ATLPTLGDRAIKL--LMPKNHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTI 166
+ DR+I + + + +RR V H AV+ + D+ + S S DRTI
Sbjct: 305 LMVTCSKDRSIAVWDMASPTDITLRR----VLVGHRAAVNVVDF--DDKYIVSASGDRTI 358
Query: 167 KIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVL 226
K+W TS + + ++ N H I + D V +GS+D I++W G + + VL
Sbjct: 359 KVWSTSTCEFVRTL-NGHKRGIACLQYRDRL-VVSGSSDNTIRLWDIECG----ACLRVL 412
Query: 227 ERHNSGINALALSCDGSVLYSGACDRSIIVWEKEE--DD---GNILVVGALRGHTKSILC 281
E H + + D + SGA D I VW+ + D + L + L H+ +
Sbjct: 413 EGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFR 470
Query: 282 MAVVSDLVCSGSADKTIRIW 301
+ + S S D TI IW
Sbjct: 471 LQFDEFQIISSSHDDTILIW 490
Score = 122 (48.0 bits), Expect = 0.00018, P = 0.00018
Identities = 40/155 (25%), Positives = 70/155 (45%)
Query: 169 WRTSDFKCLESITNAHDDAINAVALS-DDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLE 227
WR L+ I +++ L DD + +G D IK+W ++ + VL
Sbjct: 196 WRCGRHN-LQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKT----SLECLKVLT 250
Query: 228 RHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD 287
H + L L D V+ +G+ D ++ VW+ + G +L L H +++L + +
Sbjct: 251 GHTGSV--LCLQYDERVIVTGSSDSTVRVWDV--NTGEVL--NTLIHHNEAVLHLRFSNG 304
Query: 288 LVCSGSADKTIRIW-RGIDRNYTCLAVLEGHRGPV 321
L+ + S D++I +W + T VL GHR V
Sbjct: 305 LMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAV 339
>RGD|1309121 [details] [associations]
symbol:Fbxw11 "F-box and WD repeat domain containing 11"
species:10116 "Rattus norvegicus" [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006470
"protein dephosphorylation" evidence=ISO] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=ISO] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0031648 "protein destabilization" evidence=ISO] [GO:0042347
"negative regulation of NF-kappaB import into nucleus"
evidence=ISO] [GO:0042753 "positive regulation of circadian rhythm"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045862 "positive regulation
of proteolysis" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 RGD:1309121 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 IPI:IPI00368750 Ensembl:ENSRNOT00000005874
UCSC:RGD:1309121 ArrayExpress:F1M7I4 Uniprot:F1M7I4
Length = 493
Score = 232 (86.7 bits), Expect = 4.8e-17, P = 4.8e-17
Identities = 69/215 (32%), Positives = 106/215 (49%)
Query: 146 SALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSAD 205
S L L DE ++ + S D T+++W + + L ++ + H++A+ + S+ G + T S D
Sbjct: 233 SVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIH-HNEAVLHLRFSN-GLMVTCSKD 290
Query: 206 KKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGN 265
+ I VW + +L VL H + +N + D + S + DR+I VW +
Sbjct: 291 RSIAVWDMASATDI-TLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCE-- 345
Query: 266 ILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLA 325
V L GH + I C+ LV SGS+D TIR+W I+ CL VLEGH V+C+
Sbjct: 346 --FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW-DIECG-ACLRVLEGHEELVRCIR 401
Query: 326 AAIDNDRCDSSDTSYLVCSGSLDCDIKVWQISFPL 360
DN R + SG+ D IKVW + L
Sbjct: 402 --FDNKR---------IVSGAYDGKIKVWDLQAAL 425
Score = 173 (66.0 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 49/177 (27%), Positives = 85/177 (48%)
Query: 150 LTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSADKKIK 209
L D+ + S D +IKIW S +CL+ +T H ++ + D+ + TGS+D ++
Sbjct: 197 LQYDDDKIISGLRDNSIKIWDKSSLECLKVLTG-HTGSVLCLQY-DERVIVTGSSDSTVR 254
Query: 210 VWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVV 269
VW + G ++L+ HN + L L ++ + + DRSI VW+ +I +
Sbjct: 255 VWDVNTGEVLNTLI----HHNEAV--LHLRFSNGLMVTCSKDRSIAVWDMASAT-DITLR 307
Query: 270 GALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTC--LAVLEGHRGPVKCL 324
L GH ++ + + S S D+TI++W TC + L GH+ + CL
Sbjct: 308 RVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWS----TSTCEFVRTLNGHKRGIACL 360
Score = 163 (62.4 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 72/258 (27%), Positives = 111/258 (43%)
Query: 79 DKLFSAHQDHKIRVWKINNQE--PDHQKYTRLATLPTLGDRAIKLLMPKNHVQIRRHKTC 136
DK+ S +D+ I++W ++ E +T +R I + V++ T
Sbjct: 202 DKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTG 261
Query: 137 ----TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFK--CLESITNAHDDAINA 190
T +HH +AV L L L+ + S DR+I +W + L + H A+N
Sbjct: 262 EVLNTLIHHNEAV--LHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNV 319
Query: 191 VALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGAC 250
V DD + + S D+ IKVW S V L H GI L D V+ SG+
Sbjct: 320 VDF-DDKYIVSASGDRTIKVWSTSTCE----FVRTLNGHKRGIACLQYR-DRLVV-SGSS 372
Query: 251 DRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIW---RGID-- 305
D +I +W+ E G L V L GH + + C+ + + SG+ D I++W +D
Sbjct: 373 DNTIRLWDIE--CGACLRV--LEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPR 428
Query: 306 --RNYTCLAVLEGHRGPV 321
+ CL L H G V
Sbjct: 429 APASTLCLRTLVEHSGRV 446
Score = 155 (59.6 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 67/260 (25%), Positives = 109/260 (41%)
Query: 11 CLTTLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGA 70
CL L GH V L + + TGSSD+ VR WD NT E+ + +N V + +
Sbjct: 223 CLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNT--GEVLNTLIHHNEAVLHLRFS 280
Query: 71 VKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYT----RLAT-LPTLGDRAIKLLMPK 125
L+V K D I VW + + + R A + D+ I
Sbjct: 281 -NGLMVTCSK------DRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGD 333
Query: 126 NHVQIRRHKTCTWVHHVDAVS-ALA-LTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA 183
+++ TC +V ++ +A L + L+ S S D TI++W CL +
Sbjct: 334 RTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLR-VLEG 392
Query: 184 HDDAINAVALSDDGDVYTGSADKKIKVW----RRSPGNKKHSL-VDVLERHNSGINALAL 238
H++ + + D+ + +G+ D KIKVW P +L + L H SG L
Sbjct: 393 HEELVRCIRF-DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEH-SG-RVFRL 449
Query: 239 SCDGSVLYSGACDRSIIVWE 258
D + S + D +I++W+
Sbjct: 450 QFDEFQIISSSHDDTILIWD 469
Score = 155 (59.6 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 73/288 (25%), Positives = 121/288 (42%)
Query: 32 LYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAVKSLVVLADKLFSAHQDHKIR 91
+ +G DN ++ WD S L E L ++ G+V L + + D +R
Sbjct: 204 IISGLRDNSIKIWD----KSSL--ECLK---VLTGHTGSVLCLQYDERVIVTGSSDSTVR 254
Query: 92 VWKIN-----------NQEPDHQKYTRLATLPTLGDRAIKL--LMPKNHVQIRRHKTCTW 138
VW +N N+ H +++ + DR+I + + + +RR
Sbjct: 255 VWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRR----VL 310
Query: 139 VHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD 198
V H AV+ + D+ + S S DRTIK+W TS + + ++ N H I + D
Sbjct: 311 VGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTL-NGHKRGIACLQYRDRL- 366
Query: 199 VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWE 258
V +GS+D I++W G + + VLE H + + D + SGA D I VW+
Sbjct: 367 VVSGSSDNTIRLWDIECG----ACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWD 420
Query: 259 KEE--DD---GNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIW 301
+ D + L + L H+ + + + S S D TI IW
Sbjct: 421 LQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIW 468
Score = 119 (46.9 bits), Expect = 0.00036, P = 0.00036
Identities = 25/83 (30%), Positives = 43/83 (51%)
Query: 219 KHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKS 278
+H+L + R + L D + SG D SI +W+K ++ + L GHT S
Sbjct: 178 RHNLQRIQCRSENSKGVYCLQYDDDKIISGLRDNSIKIWDKS----SLECLKVLTGHTGS 233
Query: 279 ILCMAVVSDLVCSGSADKTIRIW 301
+LC+ ++ +GS+D T+R+W
Sbjct: 234 VLCLQYDERVIVTGSSDSTVRVW 256
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 187 (70.9 bits), Expect = 5.0e-17, Sum P(2) = 5.0e-17
Identities = 69/219 (31%), Positives = 103/219 (47%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H +V+ L D LLYS S DRTIK+WR D ++ H +N +ALS D +
Sbjct: 245 HTQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTL-QGHGHWVNTMALSTDYALR 302
Query: 201 TGSADK-KIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEK 259
TG+ + + V + + + SL ++ ER S N L L SG+ D ++ +W
Sbjct: 303 TGAFEPAEASV---NAQDLRGSLQELKERALSRYN-LVRGRGLERLVSGSDDFTLFLWSP 358
Query: 260 EEDDGNILVVGALRGHTKSI--LCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGH 317
ED + + GH I + + S ++ S S DK+I++W G Y LA L GH
Sbjct: 359 AEDKKPL---ARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKY--LASLRGH 413
Query: 318 RGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
V +A + D S L+ SGS D +KVW +
Sbjct: 414 VAAVYQIAWSAD---------SRLLVSGSSDSTLKVWDV 443
Score = 164 (62.8 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 78/309 (25%), Positives = 126/309 (40%)
Query: 15 LKGHNSYVSSLALAG-------KFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVG 67
L GH+ ++++L+ +++ + S D VR WD T + ++ + V
Sbjct: 195 LAGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWD--TTAGRCERILTGHTQSVTCL 252
Query: 68 KGAVKSLVVLADKLFSAHQDHKIRVWKINNQE-----PDHQKYTRLATLPTLGDRAIKL- 121
+ L L+SA QD I+VW+ ++ H + L T D A++
Sbjct: 253 RWGGDGL------LYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALST--DYALRTG 304
Query: 122 LMPKNHVQIRRHKTCTWVHHVD--AVSALALTKDETL--LYSVSWDRTIKIWRTS-DFKC 176
+ + + A+S L + L L S S D T+ +W + D K
Sbjct: 305 AFEPAEASVNAQDLRGSLQELKERALSRYNLVRGRGLERLVSGSDDFTLFLWSPAEDKKP 364
Query: 177 LESITNAHDDAINAVALSDDGDVY-TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINA 235
L +T H IN V S D + + S DK IK+W G SL H + +
Sbjct: 365 LARMTG-HQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASL----RGHVAAVYQ 419
Query: 236 LALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGS 293
+A S D +L SG+ D ++ VW+ + + L GH + + D V SG
Sbjct: 420 IAWSADSRLLVSGSSDSTLKVWDVKAQK----LAADLPGHADEVYAVDWSPDGQRVASGG 475
Query: 294 ADKTIRIWR 302
DK +RIWR
Sbjct: 476 KDKCLRIWR 484
Score = 155 (59.6 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 55/196 (28%), Positives = 92/196 (46%)
Query: 159 SVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNK 218
S S D ++++W T+ +C E I H ++ + DG +Y+ S D+ IKVWR G
Sbjct: 221 SSSKDGSVRVWDTTAGRC-ERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDG-- 277
Query: 219 KHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKS 278
L L+ H +N +ALS D + L +GA + + ++ G++ + R ++
Sbjct: 278 --VLCRTLQGHGHWVNTMALSTDYA-LRTGAFEPAEASVNAQDLRGSLQELKE-RALSRY 333
Query: 279 ILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDT 338
L + + SGS D T+ +W + LA + GH+ A+ N S D
Sbjct: 334 NLVRGRGLERLVSGSDDFTLFLWSPAEDKKP-LARMTGHQ--------ALINQVLFSPD- 383
Query: 339 SYLVCSGSLDCDIKVW 354
S ++ S S D IK+W
Sbjct: 384 SRIIASASFDKSIKLW 399
Score = 153 (58.9 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 62/222 (27%), Positives = 100/222 (45%)
Query: 121 LLMPKNHVQIRRHKTCT--WVHHVDAVSALALTKDETLLYSVSWDRTIKIW----RTSDF 174
+ P+ ++R CT H +AV ++A + L S S D T++ W T F
Sbjct: 91 IYQPQAVFRVRAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHF 150
Query: 175 KCLESITNAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGI 233
C H + +++ S DG + +G + +I +W S G + + L H+ I
Sbjct: 151 TC-----QGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGKQ---VGRALAGHSKWI 202
Query: 234 NALA---LSCDGSVLY--SGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD- 287
AL+ L + Y S + D S+ VW+ G + L GHT+S+ C+ D
Sbjct: 203 TALSWEPLHANPECRYVASSSKDGSVRVWDTTA--GRCERI--LTGHTQSVTCLRWGGDG 258
Query: 288 LVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAID 329
L+ S S D+TI++WR D C L+GH V +A + D
Sbjct: 259 LLYSASQDRTIKVWRAHD-GVLC-RTLQGHGHWVNTMALSTD 298
Score = 152 (58.6 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 63/213 (29%), Positives = 102/213 (47%)
Query: 14 TLKGHNSYVSSLALAGKF-LYTGS---SDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKG 69
TL+GH +V+++AL+ + L TG+ ++ V + D EL + LS N+V G+G
Sbjct: 282 TLQGHGHWVNTMALSTDYALRTGAFEPAEASVNAQDLRGSLQELKERALSRYNLVR-GRG 340
Query: 70 AVKSLVVLADK----LFSAHQDHKIRVWKINNQEPDHQKY----TRLATLPTLGDRAIKL 121
++ LV +D L+S +D K +Q +Q +R+ + D++IKL
Sbjct: 341 -LERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASF-DKSIKL 398
Query: 122 LMPKNHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESIT 181
+ + + HV AV +A + D LL S S D T+K+W K +
Sbjct: 399 WDGRTGKYLASLRG-----HVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLP 453
Query: 182 NAHDDAINAVALSDDGD-VYTGSADKKIKVWRR 213
H D + AV S DG V +G DK +++WRR
Sbjct: 454 G-HADEVYAVDWSPDGQRVASGGKDKCLRIWRR 485
Score = 90 (36.7 bits), Expect = 5.0e-17, Sum P(2) = 5.0e-17
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 11 CLTTLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNT 48
C ++L+GH+ V S+A + GK+L +GS D VR WD +T
Sbjct: 106 CTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLST 145
>UNIPROTKB|J9P544 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:J9P544 Ensembl:ENSCAFT00000045166 Uniprot:J9P544
Length = 510
Score = 232 (86.7 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 69/215 (32%), Positives = 106/215 (49%)
Query: 146 SALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSAD 205
S L L DE ++ + S D T+++W + + L ++ + H++A+ + S+ G + T S D
Sbjct: 250 SVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIH-HNEAVLHLRFSN-GLMVTCSKD 307
Query: 206 KKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGN 265
+ I VW + +L VL H + +N + D + S + DR+I VW +
Sbjct: 308 RSIAVWDMASATDI-TLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCE-- 362
Query: 266 ILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLA 325
V L GH + I C+ LV SGS+D TIR+W I+ CL VLEGH V+C+
Sbjct: 363 --FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW-DIECG-ACLRVLEGHEELVRCIR 418
Query: 326 AAIDNDRCDSSDTSYLVCSGSLDCDIKVWQISFPL 360
DN R + SG+ D IKVW + L
Sbjct: 419 --FDNKR---------IVSGAYDGKIKVWDLQAAL 442
Score = 170 (64.9 bits), Expect = 7.8e-10, P = 7.8e-10
Identities = 47/174 (27%), Positives = 85/174 (48%)
Query: 153 DETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSADKKIKVWR 212
DE ++ + D +IKIW + +CL+ +T H ++ + D+ + TGS+D ++VW
Sbjct: 218 DEKIISGLR-DNSIKIWDKTSLECLKVLTG-HTGSVLCLQY-DERVIVTGSSDSTVRVWD 274
Query: 213 RSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGAL 272
+ G ++L+ HN + L L ++ + + DRSI VW+ +I + L
Sbjct: 275 VNTGEVLNTLI----HHNEAV--LHLRFSNGLMVTCSKDRSIAVWDMASAT-DITLRRVL 327
Query: 273 RGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTC--LAVLEGHRGPVKCL 324
GH ++ + + S S D+TI++W TC + L GH+ + CL
Sbjct: 328 VGHRAAVNVVDFDDKYIVSASGDRTIKVWS----TSTCEFVRTLNGHKRGIACL 377
Score = 159 (61.0 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 60/194 (30%), Positives = 87/194 (44%)
Query: 137 TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFK--CLESITNAHDDAINAVALS 194
T +HH +AV L L L+ + S DR+I +W + L + H A+N V
Sbjct: 283 TLIHHNEAV--LHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF- 339
Query: 195 DDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSI 254
DD + + S D+ IKVW S V L H GI L D V+ SG+ D +I
Sbjct: 340 DDKYIVSASGDRTIKVWSTSTCE----FVRTLNGHKRGIACLQYR-DRLVV-SGSSDNTI 393
Query: 255 IVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIW---RGID----RN 307
+W+ E G L V L GH + + C+ + + SG+ D I++W +D +
Sbjct: 394 RLWDIE--CGACLRV--LEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPAS 449
Query: 308 YTCLAVLEGHRGPV 321
CL L H G V
Sbjct: 450 TLCLRTLVEHSGRV 463
Score = 155 (59.6 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 67/260 (25%), Positives = 109/260 (41%)
Query: 11 CLTTLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGA 70
CL L GH V L + + TGSSD+ VR WD NT E+ + +N V + +
Sbjct: 240 CLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNT--GEVLNTLIHHNEAVLHLRFS 297
Query: 71 VKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYT----RLAT-LPTLGDRAIKLLMPK 125
L+V K D I VW + + + R A + D+ I
Sbjct: 298 -NGLMVTCSK------DRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGD 350
Query: 126 NHVQIRRHKTCTWVHHVDAVS-ALA-LTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA 183
+++ TC +V ++ +A L + L+ S S D TI++W CL +
Sbjct: 351 RTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLR-VLEG 409
Query: 184 HDDAINAVALSDDGDVYTGSADKKIKVW----RRSPGNKKHSL-VDVLERHNSGINALAL 238
H++ + + D+ + +G+ D KIKVW P +L + L H SG L
Sbjct: 410 HEELVRCIRF-DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEH-SG-RVFRL 466
Query: 239 SCDGSVLYSGACDRSIIVWE 258
D + S + D +I++W+
Sbjct: 467 QFDEFQIISSSHDDTILIWD 486
Score = 153 (58.9 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 79/320 (24%), Positives = 132/320 (41%)
Query: 1 QHNLSVVDHHCLTTLKGHNSY-VSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLS 59
+HNL + C + NS V L + + +G DN ++ WD + E L
Sbjct: 195 RHNLQRIQ--C----RSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSL------ECLK 242
Query: 60 NNNIVAVGKGAVKSLVVLADKLFSAHQDHKIRVWKIN-----------NQEPDHQKYTRL 108
++ G+V L + + D +RVW +N N+ H +++
Sbjct: 243 ---VLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG 299
Query: 109 ATLPTLGDRAIKL--LMPKNHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTI 166
+ DR+I + + + +RR V H AV+ + D+ + S S DRTI
Sbjct: 300 LMVTCSKDRSIAVWDMASATDITLRR----VLVGHRAAVNVVDF--DDKYIVSASGDRTI 353
Query: 167 KIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVL 226
K+W TS + + ++ N H I + D V +GS+D I++W G + + VL
Sbjct: 354 KVWSTSTCEFVRTL-NGHKRGIACLQYRDRL-VVSGSSDNTIRLWDIECG----ACLRVL 407
Query: 227 ERHNSGINALALSCDGSVLYSGACDRSIIVWEKEE--DD---GNILVVGALRGHTKSILC 281
E H + + D + SGA D I VW+ + D + L + L H+ +
Sbjct: 408 EGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFR 465
Query: 282 MAVVSDLVCSGSADKTIRIW 301
+ + S S D TI IW
Sbjct: 466 LQFDEFQIISSSHDDTILIW 485
Score = 121 (47.7 bits), Expect = 0.00023, P = 0.00023
Identities = 40/155 (25%), Positives = 70/155 (45%)
Query: 169 WRTSDFKCLESITNAHDDAINAVALS-DDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLE 227
WR L+ I +++ L DD + +G D IK+W ++ + VL
Sbjct: 191 WRCGRHN-LQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKT----SLECLKVLT 245
Query: 228 RHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD 287
H + L L D V+ +G+ D ++ VW+ + G +L L H +++L + +
Sbjct: 246 GHTGSV--LCLQYDERVIVTGSSDSTVRVWDV--NTGEVL--NTLIHHNEAVLHLRFSNG 299
Query: 288 LVCSGSADKTIRIW-RGIDRNYTCLAVLEGHRGPV 321
L+ + S D++I +W + T VL GHR V
Sbjct: 300 LMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAV 334
>UNIPROTKB|B4DH70 [details] [associations]
symbol:FBXW11 "cDNA FLJ54601, highly similar to F-box/WD
repeat protein 11" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AC011410 HOGENOM:HOG000006638
HOVERGEN:HBG002521 OrthoDB:EOG4F1X2M UniGene:Hs.484138
HGNC:HGNC:13607 EMBL:AC011387 EMBL:AC113342 EMBL:AK294956
IPI:IPI01013614 SMR:B4DH70 STRING:B4DH70 Ensembl:ENST00000425623
UCSC:uc011dey.1 Uniprot:B4DH70
Length = 510
Score = 232 (86.7 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 69/215 (32%), Positives = 106/215 (49%)
Query: 146 SALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSAD 205
S L L DE ++ + S D T+++W + + L ++ + H++A+ + S+ G + T S D
Sbjct: 250 SVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIH-HNEAVLHLRFSN-GLMVTCSKD 307
Query: 206 KKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGN 265
+ I VW + +L VL H + +N + D + S + DR+I VW +
Sbjct: 308 RSIAVWDMASATDI-TLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCE-- 362
Query: 266 ILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLA 325
V L GH + I C+ LV SGS+D TIR+W I+ CL VLEGH V+C+
Sbjct: 363 --FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW-DIECG-ACLRVLEGHEELVRCIR 418
Query: 326 AAIDNDRCDSSDTSYLVCSGSLDCDIKVWQISFPL 360
DN R + SG+ D IKVW + L
Sbjct: 419 --FDNKR---------IVSGAYDGKIKVWDLQAAL 442
Score = 170 (64.9 bits), Expect = 7.8e-10, P = 7.8e-10
Identities = 47/174 (27%), Positives = 85/174 (48%)
Query: 153 DETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSADKKIKVWR 212
DE ++ + D +IKIW + +CL+ +T H ++ + D+ + TGS+D ++VW
Sbjct: 218 DEKIISGLR-DNSIKIWDKTSLECLKVLTG-HTGSVLCLQY-DERVIVTGSSDSTVRVWD 274
Query: 213 RSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGAL 272
+ G ++L+ HN + L L ++ + + DRSI VW+ +I + L
Sbjct: 275 VNTGEVLNTLI----HHNEAV--LHLRFSNGLMVTCSKDRSIAVWDMASAT-DITLRRVL 327
Query: 273 RGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTC--LAVLEGHRGPVKCL 324
GH ++ + + S S D+TI++W TC + L GH+ + CL
Sbjct: 328 VGHRAAVNVVDFDDKYIVSASGDRTIKVWS----TSTCEFVRTLNGHKRGIACL 377
Score = 159 (61.0 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 60/194 (30%), Positives = 87/194 (44%)
Query: 137 TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFK--CLESITNAHDDAINAVALS 194
T +HH +AV L L L+ + S DR+I +W + L + H A+N V
Sbjct: 283 TLIHHNEAV--LHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF- 339
Query: 195 DDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSI 254
DD + + S D+ IKVW S V L H GI L D V+ SG+ D +I
Sbjct: 340 DDKYIVSASGDRTIKVWSTSTCE----FVRTLNGHKRGIACLQYR-DRLVV-SGSSDNTI 393
Query: 255 IVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIW---RGID----RN 307
+W+ E G L V L GH + + C+ + + SG+ D I++W +D +
Sbjct: 394 RLWDIE--CGACLRV--LEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPAS 449
Query: 308 YTCLAVLEGHRGPV 321
CL L H G V
Sbjct: 450 TLCLRTLVEHSGRV 463
Score = 155 (59.6 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 67/260 (25%), Positives = 109/260 (41%)
Query: 11 CLTTLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGA 70
CL L GH V L + + TGSSD+ VR WD NT E+ + +N V + +
Sbjct: 240 CLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNT--GEVLNTLIHHNEAVLHLRFS 297
Query: 71 VKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYT----RLAT-LPTLGDRAIKLLMPK 125
L+V K D I VW + + + R A + D+ I
Sbjct: 298 -NGLMVTCSK------DRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGD 350
Query: 126 NHVQIRRHKTCTWVHHVDAVS-ALA-LTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA 183
+++ TC +V ++ +A L + L+ S S D TI++W CL +
Sbjct: 351 RTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLR-VLEG 409
Query: 184 HDDAINAVALSDDGDVYTGSADKKIKVW----RRSPGNKKHSL-VDVLERHNSGINALAL 238
H++ + + D+ + +G+ D KIKVW P +L + L H SG L
Sbjct: 410 HEELVRCIRF-DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEH-SG-RVFRL 466
Query: 239 SCDGSVLYSGACDRSIIVWE 258
D + S + D +I++W+
Sbjct: 467 QFDEFQIISSSHDDTILIWD 486
Score = 153 (58.9 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 79/320 (24%), Positives = 132/320 (41%)
Query: 1 QHNLSVVDHHCLTTLKGHNSY-VSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLS 59
+HNL + C + NS V L + + +G DN ++ WD + E L
Sbjct: 195 RHNLQRIQ--C----RSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSL------ECLK 242
Query: 60 NNNIVAVGKGAVKSLVVLADKLFSAHQDHKIRVWKIN-----------NQEPDHQKYTRL 108
++ G+V L + + D +RVW +N N+ H +++
Sbjct: 243 ---VLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG 299
Query: 109 ATLPTLGDRAIKL--LMPKNHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTI 166
+ DR+I + + + +RR V H AV+ + D+ + S S DRTI
Sbjct: 300 LMVTCSKDRSIAVWDMASATDITLRR----VLVGHRAAVNVVDF--DDKYIVSASGDRTI 353
Query: 167 KIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVL 226
K+W TS + + ++ N H I + D V +GS+D I++W G + + VL
Sbjct: 354 KVWSTSTCEFVRTL-NGHKRGIACLQYRDRL-VVSGSSDNTIRLWDIECG----ACLRVL 407
Query: 227 ERHNSGINALALSCDGSVLYSGACDRSIIVWEKEE--DD---GNILVVGALRGHTKSILC 281
E H + + D + SGA D I VW+ + D + L + L H+ +
Sbjct: 408 EGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFR 465
Query: 282 MAVVSDLVCSGSADKTIRIW 301
+ + S S D TI IW
Sbjct: 466 LQFDEFQIISSSHDDTILIW 485
Score = 121 (47.7 bits), Expect = 0.00023, P = 0.00023
Identities = 40/155 (25%), Positives = 70/155 (45%)
Query: 169 WRTSDFKCLESITNAHDDAINAVALS-DDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLE 227
WR L+ I +++ L DD + +G D IK+W ++ + VL
Sbjct: 191 WRCGRHN-LQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKT----SLECLKVLT 245
Query: 228 RHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD 287
H + L L D V+ +G+ D ++ VW+ + G +L L H +++L + +
Sbjct: 246 GHTGSV--LCLQYDERVIVTGSSDSTVRVWDV--NTGEVL--NTLIHHNEAVLHLRFSNG 299
Query: 288 LVCSGSADKTIRIW-RGIDRNYTCLAVLEGHRGPV 321
L+ + S D++I +W + T VL GHR V
Sbjct: 300 LMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAV 334
>UNIPROTKB|F1M373 [details] [associations]
symbol:Fbxw11 "Protein Fbxw11" species:10116 "Rattus
norvegicus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1309121 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 GO:GO:0045892
GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842
GO:GO:0045862 GO:GO:0000209 GO:GO:0031648 GO:GO:0042347
GO:GO:0031146 GO:GO:0042753 IPI:IPI00870648
Ensembl:ENSRNOT00000006078 ArrayExpress:F1M373 Uniprot:F1M373
Length = 527
Score = 232 (86.7 bits), Expect = 5.7e-17, P = 5.7e-17
Identities = 69/215 (32%), Positives = 106/215 (49%)
Query: 146 SALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSAD 205
S L L DE ++ + S D T+++W + + L ++ + H++A+ + S+ G + T S D
Sbjct: 267 SVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIH-HNEAVLHLRFSN-GLMVTCSKD 324
Query: 206 KKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGN 265
+ I VW + +L VL H + +N + D + S + DR+I VW +
Sbjct: 325 RSIAVWDMASATDI-TLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCE-- 379
Query: 266 ILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLA 325
V L GH + I C+ LV SGS+D TIR+W I+ CL VLEGH V+C+
Sbjct: 380 --FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW-DIECG-ACLRVLEGHEELVRCIR 435
Query: 326 AAIDNDRCDSSDTSYLVCSGSLDCDIKVWQISFPL 360
DN R + SG+ D IKVW + L
Sbjct: 436 --FDNKR---------IVSGAYDGKIKVWDLQAAL 459
Score = 173 (66.0 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 49/177 (27%), Positives = 85/177 (48%)
Query: 150 LTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSADKKIK 209
L D+ + S D +IKIW S +CL+ +T H ++ + D+ + TGS+D ++
Sbjct: 231 LQYDDDKIISGLRDNSIKIWDKSSLECLKVLTG-HTGSVLCLQY-DERVIVTGSSDSTVR 288
Query: 210 VWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVV 269
VW + G ++L+ HN + L L ++ + + DRSI VW+ +I +
Sbjct: 289 VWDVNTGEVLNTLI----HHNEAV--LHLRFSNGLMVTCSKDRSIAVWDMASAT-DITLR 341
Query: 270 GALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTC--LAVLEGHRGPVKCL 324
L GH ++ + + S S D+TI++W TC + L GH+ + CL
Sbjct: 342 RVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWS----TSTCEFVRTLNGHKRGIACL 394
Score = 163 (62.4 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 72/258 (27%), Positives = 111/258 (43%)
Query: 79 DKLFSAHQDHKIRVWKINNQE--PDHQKYTRLATLPTLGDRAIKLLMPKNHVQIRRHKTC 136
DK+ S +D+ I++W ++ E +T +R I + V++ T
Sbjct: 236 DKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTG 295
Query: 137 ----TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFK--CLESITNAHDDAINA 190
T +HH +AV L L L+ + S DR+I +W + L + H A+N
Sbjct: 296 EVLNTLIHHNEAV--LHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNV 353
Query: 191 VALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGAC 250
V DD + + S D+ IKVW S V L H GI L D V+ SG+
Sbjct: 354 VDF-DDKYIVSASGDRTIKVWSTSTCE----FVRTLNGHKRGIACLQYR-DRLVV-SGSS 406
Query: 251 DRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIW---RGID-- 305
D +I +W+ E G L V L GH + + C+ + + SG+ D I++W +D
Sbjct: 407 DNTIRLWDIE--CGACLRV--LEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPR 462
Query: 306 --RNYTCLAVLEGHRGPV 321
+ CL L H G V
Sbjct: 463 APASTLCLRTLVEHSGRV 480
Score = 155 (59.6 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 67/260 (25%), Positives = 109/260 (41%)
Query: 11 CLTTLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGA 70
CL L GH V L + + TGSSD+ VR WD NT E+ + +N V + +
Sbjct: 257 CLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNT--GEVLNTLIHHNEAVLHLRFS 314
Query: 71 VKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYT----RLAT-LPTLGDRAIKLLMPK 125
L+V K D I VW + + + R A + D+ I
Sbjct: 315 -NGLMVTCSK------DRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGD 367
Query: 126 NHVQIRRHKTCTWVHHVDAVS-ALA-LTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA 183
+++ TC +V ++ +A L + L+ S S D TI++W CL +
Sbjct: 368 RTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLR-VLEG 426
Query: 184 HDDAINAVALSDDGDVYTGSADKKIKVW----RRSPGNKKHSL-VDVLERHNSGINALAL 238
H++ + + D+ + +G+ D KIKVW P +L + L H SG L
Sbjct: 427 HEELVRCIRF-DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEH-SG-RVFRL 483
Query: 239 SCDGSVLYSGACDRSIIVWE 258
D + S + D +I++W+
Sbjct: 484 QFDEFQIISSSHDDTILIWD 503
Score = 155 (59.6 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 73/288 (25%), Positives = 121/288 (42%)
Query: 32 LYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAVKSLVVLADKLFSAHQDHKIR 91
+ +G DN ++ WD S L E L ++ G+V L + + D +R
Sbjct: 238 IISGLRDNSIKIWD----KSSL--ECLK---VLTGHTGSVLCLQYDERVIVTGSSDSTVR 288
Query: 92 VWKIN-----------NQEPDHQKYTRLATLPTLGDRAIKL--LMPKNHVQIRRHKTCTW 138
VW +N N+ H +++ + DR+I + + + +RR
Sbjct: 289 VWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRR----VL 344
Query: 139 VHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD 198
V H AV+ + D+ + S S DRTIK+W TS + + ++ N H I + D
Sbjct: 345 VGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTL-NGHKRGIACLQYRDRL- 400
Query: 199 VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWE 258
V +GS+D I++W G + + VLE H + + D + SGA D I VW+
Sbjct: 401 VVSGSSDNTIRLWDIECG----ACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWD 454
Query: 259 KEE--DD---GNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIW 301
+ D + L + L H+ + + + S S D TI IW
Sbjct: 455 LQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIW 502
Score = 119 (46.9 bits), Expect = 0.00040, P = 0.00040
Identities = 25/83 (30%), Positives = 43/83 (51%)
Query: 219 KHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKS 278
+H+L + R + L D + SG D SI +W+K ++ + L GHT S
Sbjct: 212 RHNLQRIQCRSENSKGVYCLQYDDDKIISGLRDNSIKIWDKS----SLECLKVLTGHTGS 267
Query: 279 ILCMAVVSDLVCSGSADKTIRIW 301
+LC+ ++ +GS+D T+R+W
Sbjct: 268 VLCLQYDERVIVTGSSDSTVRVW 290
>ZFIN|ZDB-GENE-040426-2903 [details] [associations]
symbol:fbxw11b "F-box and WD-40 domain protein
11b" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-040426-2903 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:BX465186
EMBL:BC056809 IPI:IPI00494842 RefSeq:NP_998669.2 UniGene:Dr.75211
SMR:Q6PGW4 STRING:Q6PGW4 Ensembl:ENSDART00000019252 GeneID:406825
KEGG:dre:406825 CTD:406825 InParanoid:Q6PGW4 NextBio:20818332
Uniprot:Q6PGW4
Length = 527
Score = 232 (86.7 bits), Expect = 5.7e-17, P = 5.7e-17
Identities = 71/216 (32%), Positives = 107/216 (49%)
Query: 146 SALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSAD 205
S L L DE ++ + S D T+++W + + L ++ + H++A+ + + G + T S D
Sbjct: 267 SVLCLQYDERVIVTGSSDSTVRVWDVNSGEVLNTLIH-HNEAVLHLRFCN-GLMVTCSKD 324
Query: 206 KKIKVW-RRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDG 264
+ I VW SP + SL VL H + +N + D + S + DR+I VW +
Sbjct: 325 RSIAVWDMASPTDI--SLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCE- 379
Query: 265 NILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCL 324
V L GH + I C+ LV SGS+D TIR+W I+ CL VLEGH V+C+
Sbjct: 380 ---FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW-DIECG-ACLRVLEGHEELVRCI 434
Query: 325 AAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQISFPL 360
DN R + SG+ D IKVW + L
Sbjct: 435 R--FDNKR---------IVSGAYDGKIKVWDLQAAL 459
Score = 172 (65.6 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 48/174 (27%), Positives = 86/174 (49%)
Query: 153 DETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSADKKIKVWR 212
DE ++ + D +IKIW +CL+ +T H ++ + D+ + TGS+D ++VW
Sbjct: 235 DEKIISGLR-DNSIKIWDKQTLECLKILTG-HTGSVLCLQY-DERVIVTGSSDSTVRVWD 291
Query: 213 RSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGAL 272
+ G ++L+ HN + L C+G ++ + + DRSI VW+ +I + L
Sbjct: 292 VNSGEVLNTLI----HHNEAVLHLRF-CNG-LMVTCSKDRSIAVWDMASPT-DISLRRVL 344
Query: 273 RGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTC--LAVLEGHRGPVKCL 324
GH ++ + + S S D+TI++W TC + L GH+ + CL
Sbjct: 345 VGHRAAVNVVDFDDKYIVSASGDRTIKVWS----TSTCEFVRTLNGHKRGIACL 394
Score = 157 (60.3 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 81/320 (25%), Positives = 131/320 (40%)
Query: 1 QHNLSVVDHHCLTTLKGHNSY-VSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLS 59
+HNL + C + NS V L + + +G DN ++ WD T E L
Sbjct: 212 RHNLQRIQ--C----RSENSKGVYCLQYDDEKIISGLRDNSIKIWDKQTL------ECLK 259
Query: 60 NNNIVAVGKGAVKSLVVLADKLFSAHQDHKIRVWKIN-----------NQEPDHQKYTRL 108
I+ G+V L + + D +RVW +N N+ H ++
Sbjct: 260 ---ILTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNSGEVLNTLIHHNEAVLHLRFCNG 316
Query: 109 ATLPTLGDRAIKL--LMPKNHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTI 166
+ DR+I + + + +RR V H AV+ + D+ + S S DRTI
Sbjct: 317 LMVTCSKDRSIAVWDMASPTDISLRR----VLVGHRAAVNVVDF--DDKYIVSASGDRTI 370
Query: 167 KIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVL 226
K+W TS + + ++ N H I + D V +GS+D I++W G + + VL
Sbjct: 371 KVWSTSTCEFVRTL-NGHKRGIACLQYRDRL-VVSGSSDNTIRLWDIECG----ACLRVL 424
Query: 227 ERHNSGINALALSCDGSVLYSGACDRSIIVWEKEE--DD---GNILVVGALRGHTKSILC 281
E H + + D + SGA D I VW+ + D + L + L H+ +
Sbjct: 425 EGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFR 482
Query: 282 MAVVSDLVCSGSADKTIRIW 301
+ + S S D TI IW
Sbjct: 483 LQFDEFQIISSSHDDTILIW 502
Score = 154 (59.3 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 67/260 (25%), Positives = 108/260 (41%)
Query: 11 CLTTLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGA 70
CL L GH V L + + TGSSD+ VR WD N S E+ + +N V +
Sbjct: 257 CLKILTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVN--SGEVLNTLIHHNEAV-LHLRF 313
Query: 71 VKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYT----RLAT-LPTLGDRAIKLLMPK 125
L+V K D I VW + + + R A + D+ I
Sbjct: 314 CNGLMVTCSK------DRSIAVWDMASPTDISLRRVLVGHRAAVNVVDFDDKYIVSASGD 367
Query: 126 NHVQIRRHKTCTWVHHVDAVS-ALA-LTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA 183
+++ TC +V ++ +A L + L+ S S D TI++W CL +
Sbjct: 368 RTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLR-VLEG 426
Query: 184 HDDAINAVALSDDGDVYTGSADKKIKVW----RRSPGNKKHSL-VDVLERHNSGINALAL 238
H++ + + D+ + +G+ D KIKVW P +L + L H SG L
Sbjct: 427 HEELVRCIRF-DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEH-SG-RVFRL 483
Query: 239 SCDGSVLYSGACDRSIIVWE 258
D + S + D +I++W+
Sbjct: 484 QFDEFQIISSSHDDTILIWD 503
>UNIPROTKB|E2RTE4 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:E2RTE4 Ensembl:ENSCAFT00000026749 Uniprot:E2RTE4
Length = 529
Score = 232 (86.7 bits), Expect = 5.8e-17, P = 5.8e-17
Identities = 69/215 (32%), Positives = 106/215 (49%)
Query: 146 SALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSAD 205
S L L DE ++ + S D T+++W + + L ++ + H++A+ + S+ G + T S D
Sbjct: 269 SVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIH-HNEAVLHLRFSN-GLMVTCSKD 326
Query: 206 KKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGN 265
+ I VW + +L VL H + +N + D + S + DR+I VW +
Sbjct: 327 RSIAVWDMASATDI-TLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCE-- 381
Query: 266 ILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLA 325
V L GH + I C+ LV SGS+D TIR+W I+ CL VLEGH V+C+
Sbjct: 382 --FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW-DIECG-ACLRVLEGHEELVRCIR 437
Query: 326 AAIDNDRCDSSDTSYLVCSGSLDCDIKVWQISFPL 360
DN R + SG+ D IKVW + L
Sbjct: 438 --FDNKR---------IVSGAYDGKIKVWDLQAAL 461
Score = 170 (64.9 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 47/174 (27%), Positives = 85/174 (48%)
Query: 153 DETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSADKKIKVWR 212
DE ++ + D +IKIW + +CL+ +T H ++ + D+ + TGS+D ++VW
Sbjct: 237 DEKIISGLR-DNSIKIWDKTSLECLKVLTG-HTGSVLCLQY-DERVIVTGSSDSTVRVWD 293
Query: 213 RSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGAL 272
+ G ++L+ HN + L L ++ + + DRSI VW+ +I + L
Sbjct: 294 VNTGEVLNTLI----HHNEAV--LHLRFSNGLMVTCSKDRSIAVWDMASAT-DITLRRVL 346
Query: 273 RGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTC--LAVLEGHRGPVKCL 324
GH ++ + + S S D+TI++W TC + L GH+ + CL
Sbjct: 347 VGHRAAVNVVDFDDKYIVSASGDRTIKVWS----TSTCEFVRTLNGHKRGIACL 396
Score = 159 (61.0 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 60/194 (30%), Positives = 87/194 (44%)
Query: 137 TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFK--CLESITNAHDDAINAVALS 194
T +HH +AV L L L+ + S DR+I +W + L + H A+N V
Sbjct: 302 TLIHHNEAV--LHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF- 358
Query: 195 DDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSI 254
DD + + S D+ IKVW S V L H GI L D V+ SG+ D +I
Sbjct: 359 DDKYIVSASGDRTIKVWSTSTCE----FVRTLNGHKRGIACLQYR-DRLVV-SGSSDNTI 412
Query: 255 IVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIW---RGID----RN 307
+W+ E G L V L GH + + C+ + + SG+ D I++W +D +
Sbjct: 413 RLWDIE--CGACLRV--LEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPAS 468
Query: 308 YTCLAVLEGHRGPV 321
CL L H G V
Sbjct: 469 TLCLRTLVEHSGRV 482
Score = 155 (59.6 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 67/260 (25%), Positives = 109/260 (41%)
Query: 11 CLTTLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGA 70
CL L GH V L + + TGSSD+ VR WD NT E+ + +N V + +
Sbjct: 259 CLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNT--GEVLNTLIHHNEAVLHLRFS 316
Query: 71 VKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYT----RLAT-LPTLGDRAIKLLMPK 125
L+V K D I VW + + + R A + D+ I
Sbjct: 317 -NGLMVTCSK------DRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGD 369
Query: 126 NHVQIRRHKTCTWVHHVDAVS-ALA-LTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA 183
+++ TC +V ++ +A L + L+ S S D TI++W CL +
Sbjct: 370 RTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLR-VLEG 428
Query: 184 HDDAINAVALSDDGDVYTGSADKKIKVW----RRSPGNKKHSL-VDVLERHNSGINALAL 238
H++ + + D+ + +G+ D KIKVW P +L + L H SG L
Sbjct: 429 HEELVRCIRF-DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEH-SG-RVFRL 485
Query: 239 SCDGSVLYSGACDRSIIVWE 258
D + S + D +I++W+
Sbjct: 486 QFDEFQIISSSHDDTILIWD 505
Score = 153 (58.9 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 79/320 (24%), Positives = 132/320 (41%)
Query: 1 QHNLSVVDHHCLTTLKGHNSY-VSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLS 59
+HNL + C + NS V L + + +G DN ++ WD + E L
Sbjct: 214 RHNLQRIQ--C----RSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSL------ECLK 261
Query: 60 NNNIVAVGKGAVKSLVVLADKLFSAHQDHKIRVWKIN-----------NQEPDHQKYTRL 108
++ G+V L + + D +RVW +N N+ H +++
Sbjct: 262 ---VLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG 318
Query: 109 ATLPTLGDRAIKL--LMPKNHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTI 166
+ DR+I + + + +RR V H AV+ + D+ + S S DRTI
Sbjct: 319 LMVTCSKDRSIAVWDMASATDITLRR----VLVGHRAAVNVVDF--DDKYIVSASGDRTI 372
Query: 167 KIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVL 226
K+W TS + + ++ N H I + D V +GS+D I++W G + + VL
Sbjct: 373 KVWSTSTCEFVRTL-NGHKRGIACLQYRDRL-VVSGSSDNTIRLWDIECG----ACLRVL 426
Query: 227 ERHNSGINALALSCDGSVLYSGACDRSIIVWEKEE--DD---GNILVVGALRGHTKSILC 281
E H + + D + SGA D I VW+ + D + L + L H+ +
Sbjct: 427 EGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFR 484
Query: 282 MAVVSDLVCSGSADKTIRIW 301
+ + S S D TI IW
Sbjct: 485 LQFDEFQIISSSHDDTILIW 504
Score = 121 (47.7 bits), Expect = 0.00024, P = 0.00024
Identities = 40/155 (25%), Positives = 70/155 (45%)
Query: 169 WRTSDFKCLESITNAHDDAINAVALS-DDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLE 227
WR L+ I +++ L DD + +G D IK+W ++ + VL
Sbjct: 210 WRCGRHN-LQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKT----SLECLKVLT 264
Query: 228 RHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD 287
H + L L D V+ +G+ D ++ VW+ + G +L L H +++L + +
Sbjct: 265 GHTGSV--LCLQYDERVIVTGSSDSTVRVWDV--NTGEVL--NTLIHHNEAVLHLRFSNG 318
Query: 288 LVCSGSADKTIRIW-RGIDRNYTCLAVLEGHRGPV 321
L+ + S D++I +W + T VL GHR V
Sbjct: 319 LMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAV 353
>UNIPROTKB|F1MLG0 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045862 "positive
regulation of proteolysis" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0031648 "protein destabilization" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:DAAA02049882
EMBL:DAAA02049883 IPI:IPI00699126 Ensembl:ENSBTAT00000061118
Uniprot:F1MLG0
Length = 530
Score = 232 (86.7 bits), Expect = 5.8e-17, P = 5.8e-17
Identities = 69/215 (32%), Positives = 106/215 (49%)
Query: 146 SALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSAD 205
S L L DE ++ + S D T+++W + + L ++ + H++A+ + S+ G + T S D
Sbjct: 270 SVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIH-HNEAVLHLRFSN-GLMVTCSKD 327
Query: 206 KKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGN 265
+ I VW + +L VL H + +N + D + S + DR+I VW +
Sbjct: 328 RSIAVWDMASATDI-TLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCE-- 382
Query: 266 ILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLA 325
V L GH + I C+ LV SGS+D TIR+W I+ CL VLEGH V+C+
Sbjct: 383 --FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW-DIECG-ACLRVLEGHEELVRCIR 438
Query: 326 AAIDNDRCDSSDTSYLVCSGSLDCDIKVWQISFPL 360
DN R + SG+ D IKVW + L
Sbjct: 439 --FDNKR---------IVSGAYDGKIKVWDLQAAL 462
Score = 170 (64.9 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 47/174 (27%), Positives = 85/174 (48%)
Query: 153 DETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSADKKIKVWR 212
DE ++ + D +IKIW + +CL+ +T H ++ + D+ + TGS+D ++VW
Sbjct: 238 DEKIISGLR-DNSIKIWDKTSLECLKVLTG-HTGSVLCLQY-DERVIVTGSSDSTVRVWD 294
Query: 213 RSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGAL 272
+ G ++L+ HN + L L ++ + + DRSI VW+ +I + L
Sbjct: 295 VNTGEVLNTLI----HHNEAV--LHLRFSNGLMVTCSKDRSIAVWDMASAT-DITLRRVL 347
Query: 273 RGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTC--LAVLEGHRGPVKCL 324
GH ++ + + S S D+TI++W TC + L GH+ + CL
Sbjct: 348 VGHRAAVNVVDFDDKYIVSASGDRTIKVWS----TSTCEFVRTLNGHKRGIACL 397
Score = 159 (61.0 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 60/194 (30%), Positives = 87/194 (44%)
Query: 137 TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFK--CLESITNAHDDAINAVALS 194
T +HH +AV L L L+ + S DR+I +W + L + H A+N V
Sbjct: 303 TLIHHNEAV--LHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF- 359
Query: 195 DDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSI 254
DD + + S D+ IKVW S V L H GI L D V+ SG+ D +I
Sbjct: 360 DDKYIVSASGDRTIKVWSTSTCE----FVRTLNGHKRGIACLQYR-DRLVV-SGSSDNTI 413
Query: 255 IVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIW---RGID----RN 307
+W+ E G L V L GH + + C+ + + SG+ D I++W +D +
Sbjct: 414 RLWDIE--CGACLRV--LEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPAS 469
Query: 308 YTCLAVLEGHRGPV 321
CL L H G V
Sbjct: 470 TLCLRTLVEHSGRV 483
Score = 155 (59.6 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 67/260 (25%), Positives = 109/260 (41%)
Query: 11 CLTTLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGA 70
CL L GH V L + + TGSSD+ VR WD NT E+ + +N V + +
Sbjct: 260 CLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNT--GEVLNTLIHHNEAVLHLRFS 317
Query: 71 VKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYT----RLAT-LPTLGDRAIKLLMPK 125
L+V K D I VW + + + R A + D+ I
Sbjct: 318 -NGLMVTCSK------DRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGD 370
Query: 126 NHVQIRRHKTCTWVHHVDAVS-ALA-LTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA 183
+++ TC +V ++ +A L + L+ S S D TI++W CL +
Sbjct: 371 RTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLR-VLEG 429
Query: 184 HDDAINAVALSDDGDVYTGSADKKIKVW----RRSPGNKKHSL-VDVLERHNSGINALAL 238
H++ + + D+ + +G+ D KIKVW P +L + L H SG L
Sbjct: 430 HEELVRCIRF-DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEH-SG-RVFRL 486
Query: 239 SCDGSVLYSGACDRSIIVWE 258
D + S + D +I++W+
Sbjct: 487 QFDEFQIISSSHDDTILIWD 506
Score = 153 (58.9 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 79/320 (24%), Positives = 132/320 (41%)
Query: 1 QHNLSVVDHHCLTTLKGHNSY-VSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLS 59
+HNL + C + NS V L + + +G DN ++ WD + E L
Sbjct: 215 RHNLQRIQ--C----RSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSL------ECLK 262
Query: 60 NNNIVAVGKGAVKSLVVLADKLFSAHQDHKIRVWKIN-----------NQEPDHQKYTRL 108
++ G+V L + + D +RVW +N N+ H +++
Sbjct: 263 ---VLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG 319
Query: 109 ATLPTLGDRAIKL--LMPKNHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTI 166
+ DR+I + + + +RR V H AV+ + D+ + S S DRTI
Sbjct: 320 LMVTCSKDRSIAVWDMASATDITLRR----VLVGHRAAVNVVDF--DDKYIVSASGDRTI 373
Query: 167 KIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVL 226
K+W TS + + ++ N H I + D V +GS+D I++W G + + VL
Sbjct: 374 KVWSTSTCEFVRTL-NGHKRGIACLQYRDRL-VVSGSSDNTIRLWDIECG----ACLRVL 427
Query: 227 ERHNSGINALALSCDGSVLYSGACDRSIIVWEKEE--DD---GNILVVGALRGHTKSILC 281
E H + + D + SGA D I VW+ + D + L + L H+ +
Sbjct: 428 EGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFR 485
Query: 282 MAVVSDLVCSGSADKTIRIW 301
+ + S S D TI IW
Sbjct: 486 LQFDEFQIISSSHDDTILIW 505
Score = 121 (47.7 bits), Expect = 0.00024, P = 0.00024
Identities = 40/155 (25%), Positives = 70/155 (45%)
Query: 169 WRTSDFKCLESITNAHDDAINAVALS-DDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLE 227
WR L+ I +++ L DD + +G D IK+W ++ + VL
Sbjct: 211 WRCGRHN-LQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKT----SLECLKVLT 265
Query: 228 RHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD 287
H + L L D V+ +G+ D ++ VW+ + G +L L H +++L + +
Sbjct: 266 GHTGSV--LCLQYDERVIVTGSSDSTVRVWDV--NTGEVL--NTLIHHNEAVLHLRFSNG 319
Query: 288 LVCSGSADKTIRIW-RGIDRNYTCLAVLEGHRGPV 321
L+ + S D++I +W + T VL GHR V
Sbjct: 320 LMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAV 354
>MGI|MGI:2144023 [details] [associations]
symbol:Fbxw11 "F-box and WD-40 domain protein 11"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=ISO;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006470
"protein dephosphorylation" evidence=IDA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO;IDA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO;IMP] [GO:0031648 "protein
destabilization" evidence=ISO] [GO:0042347 "negative regulation of
NF-kappaB import into nucleus" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048511 "rhythmic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
MGI:MGI:2144023 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 EMBL:AL669951 GO:GO:0042753
EMBL:AL669844 HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362
OrthoDB:EOG4F1X2M GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AY038079 EMBL:AK041532 EMBL:AK149139 EMBL:AK152181
EMBL:AK160086 EMBL:AK166226 EMBL:AK168667 EMBL:BC034261
IPI:IPI00473301 IPI:IPI00474016 IPI:IPI00515142 IPI:IPI00969335
RefSeq:NP_001258276.1 RefSeq:NP_001258277.1 RefSeq:NP_001258278.1
RefSeq:NP_598776.1 UniGene:Mm.28017 UniGene:Mm.474118
ProteinModelPortal:Q5SRY7 SMR:Q5SRY7 DIP:DIP-59921N STRING:Q5SRY7
PhosphoSite:Q5SRY7 PRIDE:Q5SRY7 Ensembl:ENSMUST00000076383
Ensembl:ENSMUST00000093205 Ensembl:ENSMUST00000109366 GeneID:103583
KEGG:mmu:103583 UCSC:uc007ijx.1 UCSC:uc007ijy.1 UCSC:uc007ijz.1
UCSC:uc007ika.1 InParanoid:Q923H0 ChiTaRS:FBXW11 NextBio:356027
Bgee:Q5SRY7 Genevestigator:Q5SRY7 Uniprot:Q5SRY7
Length = 542
Score = 232 (86.7 bits), Expect = 6.1e-17, P = 6.1e-17
Identities = 69/215 (32%), Positives = 106/215 (49%)
Query: 146 SALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSAD 205
S L L DE ++ + S D T+++W + + L ++ + H++A+ + S+ G + T S D
Sbjct: 282 SVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIH-HNEAVLHLRFSN-GLMVTCSKD 339
Query: 206 KKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGN 265
+ I VW + +L VL H + +N + D + S + DR+I VW +
Sbjct: 340 RSIAVWDMASATDI-TLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCE-- 394
Query: 266 ILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLA 325
V L GH + I C+ LV SGS+D TIR+W I+ CL VLEGH V+C+
Sbjct: 395 --FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW-DIECG-ACLRVLEGHEELVRCIR 450
Query: 326 AAIDNDRCDSSDTSYLVCSGSLDCDIKVWQISFPL 360
DN R + SG+ D IKVW + L
Sbjct: 451 --FDNKR---------IVSGAYDGKIKVWDLQAAL 474
Score = 173 (66.0 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 49/177 (27%), Positives = 85/177 (48%)
Query: 150 LTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSADKKIK 209
L D+ + S D +IKIW S +CL+ +T H ++ + D+ + TGS+D ++
Sbjct: 246 LQYDDDKIISGLRDNSIKIWDKSSLECLKVLTG-HTGSVLCLQY-DERVIVTGSSDSTVR 303
Query: 210 VWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVV 269
VW + G ++L+ HN + L L ++ + + DRSI VW+ +I +
Sbjct: 304 VWDVNTGEVLNTLI----HHNEAV--LHLRFSNGLMVTCSKDRSIAVWDMASAT-DITLR 356
Query: 270 GALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTC--LAVLEGHRGPVKCL 324
L GH ++ + + S S D+TI++W TC + L GH+ + CL
Sbjct: 357 RVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWS----TSTCEFVRTLNGHKRGIACL 409
Score = 163 (62.4 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 72/258 (27%), Positives = 111/258 (43%)
Query: 79 DKLFSAHQDHKIRVWKINNQE--PDHQKYTRLATLPTLGDRAIKLLMPKNHVQIRRHKTC 136
DK+ S +D+ I++W ++ E +T +R I + V++ T
Sbjct: 251 DKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTG 310
Query: 137 ----TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFK--CLESITNAHDDAINA 190
T +HH +AV L L L+ + S DR+I +W + L + H A+N
Sbjct: 311 EVLNTLIHHNEAV--LHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNV 368
Query: 191 VALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGAC 250
V DD + + S D+ IKVW S V L H GI L D V+ SG+
Sbjct: 369 VDF-DDKYIVSASGDRTIKVWSTSTCE----FVRTLNGHKRGIACLQYR-DRLVV-SGSS 421
Query: 251 DRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIW---RGID-- 305
D +I +W+ E G L V L GH + + C+ + + SG+ D I++W +D
Sbjct: 422 DNTIRLWDIE--CGACLRV--LEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPR 477
Query: 306 --RNYTCLAVLEGHRGPV 321
+ CL L H G V
Sbjct: 478 APASTLCLRTLVEHSGRV 495
Score = 155 (59.6 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 67/260 (25%), Positives = 109/260 (41%)
Query: 11 CLTTLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGA 70
CL L GH V L + + TGSSD+ VR WD NT E+ + +N V + +
Sbjct: 272 CLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNT--GEVLNTLIHHNEAVLHLRFS 329
Query: 71 VKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYT----RLAT-LPTLGDRAIKLLMPK 125
L+V K D I VW + + + R A + D+ I
Sbjct: 330 -NGLMVTCSK------DRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGD 382
Query: 126 NHVQIRRHKTCTWVHHVDAVS-ALA-LTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA 183
+++ TC +V ++ +A L + L+ S S D TI++W CL +
Sbjct: 383 RTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLR-VLEG 441
Query: 184 HDDAINAVALSDDGDVYTGSADKKIKVW----RRSPGNKKHSL-VDVLERHNSGINALAL 238
H++ + + D+ + +G+ D KIKVW P +L + L H SG L
Sbjct: 442 HEELVRCIRF-DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEH-SG-RVFRL 498
Query: 239 SCDGSVLYSGACDRSIIVWE 258
D + S + D +I++W+
Sbjct: 499 QFDEFQIISSSHDDTILIWD 518
Score = 155 (59.6 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 73/288 (25%), Positives = 121/288 (42%)
Query: 32 LYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAVKSLVVLADKLFSAHQDHKIR 91
+ +G DN ++ WD S L E L ++ G+V L + + D +R
Sbjct: 253 IISGLRDNSIKIWD----KSSL--ECLK---VLTGHTGSVLCLQYDERVIVTGSSDSTVR 303
Query: 92 VWKIN-----------NQEPDHQKYTRLATLPTLGDRAIKL--LMPKNHVQIRRHKTCTW 138
VW +N N+ H +++ + DR+I + + + +RR
Sbjct: 304 VWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITLRR----VL 359
Query: 139 VHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD 198
V H AV+ + D+ + S S DRTIK+W TS + + ++ N H I + D
Sbjct: 360 VGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTL-NGHKRGIACLQYRDRL- 415
Query: 199 VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWE 258
V +GS+D I++W G + + VLE H + + D + SGA D I VW+
Sbjct: 416 VVSGSSDNTIRLWDIECG----ACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWD 469
Query: 259 KEE--DD---GNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIW 301
+ D + L + L H+ + + + S S D TI IW
Sbjct: 470 LQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIW 517
Score = 119 (46.9 bits), Expect = 0.00041, P = 0.00041
Identities = 25/83 (30%), Positives = 43/83 (51%)
Query: 219 KHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKS 278
+H+L + R + L D + SG D SI +W+K ++ + L GHT S
Sbjct: 227 RHNLQRIQCRSENSKGVYCLQYDDDKIISGLRDNSIKIWDKS----SLECLKVLTGHTGS 282
Query: 279 ILCMAVVSDLVCSGSADKTIRIW 301
+LC+ ++ +GS+D T+R+W
Sbjct: 283 VLCLQYDERVIVTGSSDSTVRVW 305
>UNIPROTKB|F1PBF1 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 KO:K03362 GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AAEX03003014 RefSeq:XP_866627.1
ProteinModelPortal:F1PBF1 Ensembl:ENSCAFT00000026752 GeneID:479291
KEGG:cfa:479291 Uniprot:F1PBF1
Length = 542
Score = 232 (86.7 bits), Expect = 6.1e-17, P = 6.1e-17
Identities = 69/215 (32%), Positives = 106/215 (49%)
Query: 146 SALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSAD 205
S L L DE ++ + S D T+++W + + L ++ + H++A+ + S+ G + T S D
Sbjct: 282 SVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIH-HNEAVLHLRFSN-GLMVTCSKD 339
Query: 206 KKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGN 265
+ I VW + +L VL H + +N + D + S + DR+I VW +
Sbjct: 340 RSIAVWDMASATDI-TLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCE-- 394
Query: 266 ILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLA 325
V L GH + I C+ LV SGS+D TIR+W I+ CL VLEGH V+C+
Sbjct: 395 --FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW-DIECG-ACLRVLEGHEELVRCIR 450
Query: 326 AAIDNDRCDSSDTSYLVCSGSLDCDIKVWQISFPL 360
DN R + SG+ D IKVW + L
Sbjct: 451 --FDNKR---------IVSGAYDGKIKVWDLQAAL 474
Score = 170 (64.9 bits), Expect = 8.7e-10, P = 8.7e-10
Identities = 47/174 (27%), Positives = 85/174 (48%)
Query: 153 DETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSADKKIKVWR 212
DE ++ + D +IKIW + +CL+ +T H ++ + D+ + TGS+D ++VW
Sbjct: 250 DEKIISGLR-DNSIKIWDKTSLECLKVLTG-HTGSVLCLQY-DERVIVTGSSDSTVRVWD 306
Query: 213 RSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGAL 272
+ G ++L+ HN + L L ++ + + DRSI VW+ +I + L
Sbjct: 307 VNTGEVLNTLI----HHNEAV--LHLRFSNGLMVTCSKDRSIAVWDMASAT-DITLRRVL 359
Query: 273 RGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTC--LAVLEGHRGPVKCL 324
GH ++ + + S S D+TI++W TC + L GH+ + CL
Sbjct: 360 VGHRAAVNVVDFDDKYIVSASGDRTIKVWS----TSTCEFVRTLNGHKRGIACL 409
Score = 159 (61.0 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 60/194 (30%), Positives = 87/194 (44%)
Query: 137 TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFK--CLESITNAHDDAINAVALS 194
T +HH +AV L L L+ + S DR+I +W + L + H A+N V
Sbjct: 315 TLIHHNEAV--LHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF- 371
Query: 195 DDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSI 254
DD + + S D+ IKVW S V L H GI L D V+ SG+ D +I
Sbjct: 372 DDKYIVSASGDRTIKVWSTSTCE----FVRTLNGHKRGIACLQYR-DRLVV-SGSSDNTI 425
Query: 255 IVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIW---RGID----RN 307
+W+ E G L V L GH + + C+ + + SG+ D I++W +D +
Sbjct: 426 RLWDIE--CGACLRV--LEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPAS 481
Query: 308 YTCLAVLEGHRGPV 321
CL L H G V
Sbjct: 482 TLCLRTLVEHSGRV 495
Score = 155 (59.6 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 67/260 (25%), Positives = 109/260 (41%)
Query: 11 CLTTLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGA 70
CL L GH V L + + TGSSD+ VR WD NT E+ + +N V + +
Sbjct: 272 CLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNT--GEVLNTLIHHNEAVLHLRFS 329
Query: 71 VKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYT----RLAT-LPTLGDRAIKLLMPK 125
L+V K D I VW + + + R A + D+ I
Sbjct: 330 -NGLMVTCSK------DRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGD 382
Query: 126 NHVQIRRHKTCTWVHHVDAVS-ALA-LTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA 183
+++ TC +V ++ +A L + L+ S S D TI++W CL +
Sbjct: 383 RTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLR-VLEG 441
Query: 184 HDDAINAVALSDDGDVYTGSADKKIKVW----RRSPGNKKHSL-VDVLERHNSGINALAL 238
H++ + + D+ + +G+ D KIKVW P +L + L H SG L
Sbjct: 442 HEELVRCIRF-DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEH-SG-RVFRL 498
Query: 239 SCDGSVLYSGACDRSIIVWE 258
D + S + D +I++W+
Sbjct: 499 QFDEFQIISSSHDDTILIWD 518
Score = 153 (58.9 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 79/320 (24%), Positives = 132/320 (41%)
Query: 1 QHNLSVVDHHCLTTLKGHNSY-VSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLS 59
+HNL + C + NS V L + + +G DN ++ WD + E L
Sbjct: 227 RHNLQRIQ--C----RSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSL------ECLK 274
Query: 60 NNNIVAVGKGAVKSLVVLADKLFSAHQDHKIRVWKIN-----------NQEPDHQKYTRL 108
++ G+V L + + D +RVW +N N+ H +++
Sbjct: 275 ---VLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG 331
Query: 109 ATLPTLGDRAIKL--LMPKNHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTI 166
+ DR+I + + + +RR V H AV+ + D+ + S S DRTI
Sbjct: 332 LMVTCSKDRSIAVWDMASATDITLRR----VLVGHRAAVNVVDF--DDKYIVSASGDRTI 385
Query: 167 KIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVL 226
K+W TS + + ++ N H I + D V +GS+D I++W G + + VL
Sbjct: 386 KVWSTSTCEFVRTL-NGHKRGIACLQYRDRL-VVSGSSDNTIRLWDIECG----ACLRVL 439
Query: 227 ERHNSGINALALSCDGSVLYSGACDRSIIVWEKEE--DD---GNILVVGALRGHTKSILC 281
E H + + D + SGA D I VW+ + D + L + L H+ +
Sbjct: 440 EGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFR 497
Query: 282 MAVVSDLVCSGSADKTIRIW 301
+ + S S D TI IW
Sbjct: 498 LQFDEFQIISSSHDDTILIW 517
Score = 121 (47.7 bits), Expect = 0.00025, P = 0.00025
Identities = 40/155 (25%), Positives = 70/155 (45%)
Query: 169 WRTSDFKCLESITNAHDDAINAVALS-DDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLE 227
WR L+ I +++ L DD + +G D IK+W ++ + VL
Sbjct: 223 WRCGRHN-LQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKT----SLECLKVLT 277
Query: 228 RHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD 287
H + L L D V+ +G+ D ++ VW+ + G +L L H +++L + +
Sbjct: 278 GHTGSV--LCLQYDERVIVTGSSDSTVRVWDV--NTGEVL--NTLIHHNEAVLHLRFSNG 331
Query: 288 LVCSGSADKTIRIW-RGIDRNYTCLAVLEGHRGPV 321
L+ + S D++I +W + T VL GHR V
Sbjct: 332 LMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAV 366
>UNIPROTKB|Q9UKB1 [details] [associations]
symbol:FBXW11 "F-box/WD repeat-containing protein 11"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=NAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;NAS] [GO:0016567
"protein ubiquitination" evidence=IDA;NAS] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IDA] [GO:0006470 "protein
dephosphorylation" evidence=ISS] [GO:0042753 "positive regulation
of circadian rhythm" evidence=ISS] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0031648 "protein destabilization"
evidence=IMP] [GO:0045862 "positive regulation of proteolysis"
evidence=IMP] [GO:0005813 "centrosome" evidence=IDA] [GO:0005829
"cytosol" evidence=ISS;TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 Reactome:REACT_6900
GO:GO:0045892 GO:GO:0045893
Pathway_Interaction_DB:wnt_canonical_pathway
Pathway_Interaction_DB:ps1pathway GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862
Pathway_Interaction_DB:hedgehog_glipathway GO:GO:0000209
Pathway_Interaction_DB:hdac_classi_pathway
Pathway_Interaction_DB:nfkappabatypicalpathway
Pathway_Interaction_DB:nfkappabcanonicalpathway GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753 HOGENOM:HOG000006638
HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M EMBL:AF176022
EMBL:AB033279 EMBL:AB033280 EMBL:AB033281 EMBL:AB014596
EMBL:AK314999 EMBL:BC026213 IPI:IPI00301283 IPI:IPI00306671
IPI:IPI00328796 RefSeq:NP_036432.2 RefSeq:NP_387448.2
RefSeq:NP_387449.2 UniGene:Hs.484138 ProteinModelPortal:Q9UKB1
SMR:Q9UKB1 DIP:DIP-27593N IntAct:Q9UKB1 MINT:MINT-120522
STRING:Q9UKB1 PhosphoSite:Q9UKB1 DMDM:13124267 PRIDE:Q9UKB1
DNASU:23291 Ensembl:ENST00000265094 Ensembl:ENST00000296933
Ensembl:ENST00000393802 GeneID:23291 KEGG:hsa:23291 UCSC:uc003mbl.1
UCSC:uc003mbm.1 UCSC:uc003mbn.1 CTD:23291 GeneCards:GC05M171288
HGNC:HGNC:13607 MIM:605651 neXtProt:NX_Q9UKB1 PharmGKB:PA28050
InParanoid:Q9UKB1 OMA:FDQWSEA PhylomeDB:Q9UKB1
Pathway_Interaction_DB:nfkappabalternativepathway GenomeRNAi:23291
NextBio:45108 ArrayExpress:Q9UKB1 Bgee:Q9UKB1 CleanEx:HS_FBXW11
Genevestigator:Q9UKB1 GermOnline:ENSG00000072803 Uniprot:Q9UKB1
Length = 542
Score = 232 (86.7 bits), Expect = 6.1e-17, P = 6.1e-17
Identities = 69/215 (32%), Positives = 106/215 (49%)
Query: 146 SALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSAD 205
S L L DE ++ + S D T+++W + + L ++ + H++A+ + S+ G + T S D
Sbjct: 282 SVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIH-HNEAVLHLRFSN-GLMVTCSKD 339
Query: 206 KKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGN 265
+ I VW + +L VL H + +N + D + S + DR+I VW +
Sbjct: 340 RSIAVWDMASATDI-TLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCE-- 394
Query: 266 ILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLA 325
V L GH + I C+ LV SGS+D TIR+W I+ CL VLEGH V+C+
Sbjct: 395 --FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW-DIECG-ACLRVLEGHEELVRCIR 450
Query: 326 AAIDNDRCDSSDTSYLVCSGSLDCDIKVWQISFPL 360
DN R + SG+ D IKVW + L
Sbjct: 451 --FDNKR---------IVSGAYDGKIKVWDLQAAL 474
Score = 170 (64.9 bits), Expect = 8.7e-10, P = 8.7e-10
Identities = 47/174 (27%), Positives = 85/174 (48%)
Query: 153 DETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSADKKIKVWR 212
DE ++ + D +IKIW + +CL+ +T H ++ + D+ + TGS+D ++VW
Sbjct: 250 DEKIISGLR-DNSIKIWDKTSLECLKVLTG-HTGSVLCLQY-DERVIVTGSSDSTVRVWD 306
Query: 213 RSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGAL 272
+ G ++L+ HN + L L ++ + + DRSI VW+ +I + L
Sbjct: 307 VNTGEVLNTLI----HHNEAV--LHLRFSNGLMVTCSKDRSIAVWDMASAT-DITLRRVL 359
Query: 273 RGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTC--LAVLEGHRGPVKCL 324
GH ++ + + S S D+TI++W TC + L GH+ + CL
Sbjct: 360 VGHRAAVNVVDFDDKYIVSASGDRTIKVWS----TSTCEFVRTLNGHKRGIACL 409
Score = 159 (61.0 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 60/194 (30%), Positives = 87/194 (44%)
Query: 137 TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFK--CLESITNAHDDAINAVALS 194
T +HH +AV L L L+ + S DR+I +W + L + H A+N V
Sbjct: 315 TLIHHNEAV--LHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF- 371
Query: 195 DDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSI 254
DD + + S D+ IKVW S V L H GI L D V+ SG+ D +I
Sbjct: 372 DDKYIVSASGDRTIKVWSTSTCE----FVRTLNGHKRGIACLQYR-DRLVV-SGSSDNTI 425
Query: 255 IVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIW---RGID----RN 307
+W+ E G L V L GH + + C+ + + SG+ D I++W +D +
Sbjct: 426 RLWDIE--CGACLRV--LEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPAS 481
Query: 308 YTCLAVLEGHRGPV 321
CL L H G V
Sbjct: 482 TLCLRTLVEHSGRV 495
Score = 155 (59.6 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 67/260 (25%), Positives = 109/260 (41%)
Query: 11 CLTTLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGA 70
CL L GH V L + + TGSSD+ VR WD NT E+ + +N V + +
Sbjct: 272 CLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNT--GEVLNTLIHHNEAVLHLRFS 329
Query: 71 VKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYT----RLAT-LPTLGDRAIKLLMPK 125
L+V K D I VW + + + R A + D+ I
Sbjct: 330 -NGLMVTCSK------DRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGD 382
Query: 126 NHVQIRRHKTCTWVHHVDAVS-ALA-LTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA 183
+++ TC +V ++ +A L + L+ S S D TI++W CL +
Sbjct: 383 RTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLR-VLEG 441
Query: 184 HDDAINAVALSDDGDVYTGSADKKIKVW----RRSPGNKKHSL-VDVLERHNSGINALAL 238
H++ + + D+ + +G+ D KIKVW P +L + L H SG L
Sbjct: 442 HEELVRCIRF-DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEH-SG-RVFRL 498
Query: 239 SCDGSVLYSGACDRSIIVWE 258
D + S + D +I++W+
Sbjct: 499 QFDEFQIISSSHDDTILIWD 518
Score = 153 (58.9 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 79/320 (24%), Positives = 132/320 (41%)
Query: 1 QHNLSVVDHHCLTTLKGHNSY-VSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLS 59
+HNL + C + NS V L + + +G DN ++ WD + E L
Sbjct: 227 RHNLQRIQ--C----RSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSL------ECLK 274
Query: 60 NNNIVAVGKGAVKSLVVLADKLFSAHQDHKIRVWKIN-----------NQEPDHQKYTRL 108
++ G+V L + + D +RVW +N N+ H +++
Sbjct: 275 ---VLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG 331
Query: 109 ATLPTLGDRAIKL--LMPKNHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTI 166
+ DR+I + + + +RR V H AV+ + D+ + S S DRTI
Sbjct: 332 LMVTCSKDRSIAVWDMASATDITLRR----VLVGHRAAVNVVDF--DDKYIVSASGDRTI 385
Query: 167 KIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVL 226
K+W TS + + ++ N H I + D V +GS+D I++W G + + VL
Sbjct: 386 KVWSTSTCEFVRTL-NGHKRGIACLQYRDRL-VVSGSSDNTIRLWDIECG----ACLRVL 439
Query: 227 ERHNSGINALALSCDGSVLYSGACDRSIIVWEKEE--DD---GNILVVGALRGHTKSILC 281
E H + + D + SGA D I VW+ + D + L + L H+ +
Sbjct: 440 EGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFR 497
Query: 282 MAVVSDLVCSGSADKTIRIW 301
+ + S S D TI IW
Sbjct: 498 LQFDEFQIISSSHDDTILIW 517
Score = 121 (47.7 bits), Expect = 0.00025, P = 0.00025
Identities = 40/155 (25%), Positives = 70/155 (45%)
Query: 169 WRTSDFKCLESITNAHDDAINAVALS-DDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLE 227
WR L+ I +++ L DD + +G D IK+W ++ + VL
Sbjct: 223 WRCGRHN-LQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKT----SLECLKVLT 277
Query: 228 RHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD 287
H + L L D V+ +G+ D ++ VW+ + G +L L H +++L + +
Sbjct: 278 GHTGSV--LCLQYDERVIVTGSSDSTVRVWDV--NTGEVL--NTLIHHNEAVLHLRFSNG 331
Query: 288 LVCSGSADKTIRIW-RGIDRNYTCLAVLEGHRGPV 321
L+ + S D++I +W + T VL GHR V
Sbjct: 332 LMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAV 366
>UNIPROTKB|Q68DS0 [details] [associations]
symbol:DKFZp781N011 "Putative uncharacterized protein
DKFZp781N011" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AL627424 EMBL:AL133387 EMBL:AL445463
RefSeq:NP_003930.1 RefSeq:NP_378663.1 UniGene:Hs.643802
UniGene:Hs.713753 GeneID:8945 KEGG:hsa:8945 CTD:8945 HGNC:HGNC:1144
HOVERGEN:HBG002521 KO:K03362 ChiTaRS:BTRC GenomeRNAi:8945
EMBL:CR749295 IPI:IPI01012795 RefSeq:NP_001243785.1 SMR:Q68DS0
STRING:Q68DS0 Ensembl:ENST00000393441 Uniprot:Q68DS0
Length = 564
Score = 232 (86.7 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 78/244 (31%), Positives = 120/244 (49%)
Query: 114 LGDRAIKLLMPKNHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSD 173
L D IK+ KN ++ +R T H +V L L DE ++ + S D T+++W +
Sbjct: 279 LRDNTIKI-WDKNTLECKRILT----GHTGSV--LCLQYDERVIITGSSDSTVRVWDVNT 331
Query: 174 FKCLESITNAHDDAINAVALSDDGDVYTGSADKKIKVW-RRSPGNKKHSLVDVLERHNSG 232
+ L ++ + H +A+ + ++ G + T S D+ I VW SP + +L VL H +
Sbjct: 332 GEMLNTLIH-HCEAVLHLRFNN-GMMVTCSKDRSIAVWDMASPTDI--TLRRVLVGHRAA 387
Query: 233 INALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSG 292
+N + D + S + DR+I VW + V L GH + I C+ LV SG
Sbjct: 388 VNVVDF--DDKYIVSASGDRTIKVWNTSTCE----FVRTLNGHKRGIACLQYRDRLVVSG 441
Query: 293 SADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIK 352
S+D TIR+W I+ CL VLEGH V+C+ DN R + SG+ D IK
Sbjct: 442 SSDNTIRLW-DIECG-ACLRVLEGHEELVRCIR--FDNKR---------IVSGAYDGKIK 488
Query: 353 VWQI 356
VW +
Sbjct: 489 VWDL 492
Score = 164 (62.8 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 81/320 (25%), Positives = 129/320 (40%)
Query: 1 QHNLSVVDHHCLT-TLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLS 59
+H+L + HC + T KG V L + + +G DN ++ WD NT L
Sbjct: 249 RHSLQRI--HCRSETSKG----VYCLQYDDQKIVSGLRDNTIKIWDKNT---------LE 293
Query: 60 NNNIVAVGKGAVKSLVVLADKLFSAHQDHKIRVWKINNQEPD-----------HQKYTRL 108
I+ G+V L + + D +RVW +N E H ++
Sbjct: 294 CKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNG 353
Query: 109 ATLPTLGDRAIKL--LMPKNHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTI 166
+ DR+I + + + +RR V H AV+ + D+ + S S DRTI
Sbjct: 354 MMVTCSKDRSIAVWDMASPTDITLRR----VLVGHRAAVNVVDF--DDKYIVSASGDRTI 407
Query: 167 KIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVL 226
K+W TS + + ++ N H I + D V +GS+D I++W G + + VL
Sbjct: 408 KVWNTSTCEFVRTL-NGHKRGIACLQYRDRL-VVSGSSDNTIRLWDIECG----ACLRVL 461
Query: 227 ERHNSGINALALSCDGSVLYSGACDRSIIVWE-----KEEDDGNILVVGALRGHTKSILC 281
E H + + D + SGA D I VW+ L + L H+ +
Sbjct: 462 EGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFR 519
Query: 282 MAVVSDLVCSGSADKTIRIW 301
+ + S S D TI IW
Sbjct: 520 LQFDEFQIVSSSHDDTILIW 539
Score = 161 (61.7 bits), Expect = 9.5e-09, P = 9.5e-09
Identities = 47/177 (26%), Positives = 83/177 (46%)
Query: 150 LTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSADKKIK 209
L D+ + S D TIKIW + +C +T H ++ + D+ + TGS+D ++
Sbjct: 268 LQYDDQKIVSGLRDNTIKIWDKNTLECKRILTG-HTGSVLCLQY-DERVIITGSSDSTVR 325
Query: 210 VWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVV 269
VW + G ++L+ H + L L + ++ + + DRSI VW+ +I +
Sbjct: 326 VWDVNTGEMLNTLI----HHCEAV--LHLRFNNGMMVTCSKDRSIAVWDMASPT-DITLR 378
Query: 270 GALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTC--LAVLEGHRGPVKCL 324
L GH ++ + + S S D+TI++W TC + L GH+ + CL
Sbjct: 379 RVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWN----TSTCEFVRTLNGHKRGIACL 431
Score = 142 (55.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 66/260 (25%), Positives = 108/260 (41%)
Query: 11 CLTTLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGA 70
C L GH V L + + TGSSD+ VR WD NT E L N ++ + A
Sbjct: 294 CKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNT------GEML--NTLIHHCE-A 344
Query: 71 VKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYT----RLAT-LPTLGDRAIKLLMPK 125
V L + + +D I VW + + + R A + D+ I
Sbjct: 345 VLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGD 404
Query: 126 NHVQIRRHKTCTWVHHVDAVS-ALA-LTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA 183
+++ TC +V ++ +A L + L+ S S D TI++W CL +
Sbjct: 405 RTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLR-VLEG 463
Query: 184 HDDAINAVALSDDGDVYTGSADKKIKVW----RRSPGNKKHSL-VDVLERHNSGINALAL 238
H++ + + D+ + +G+ D KIKVW P +L + L H SG L
Sbjct: 464 HEELVRCIRF-DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEH-SG-RVFRL 520
Query: 239 SCDGSVLYSGACDRSIIVWE 258
D + S + D +I++W+
Sbjct: 521 QFDEFQIVSSSHDDTILIWD 540
>UNIPROTKB|Q9Y297 [details] [associations]
symbol:BTRC "F-box/WD repeat-containing protein 1A"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0033598
"mammary gland epithelial cell proliferation" evidence=IEA]
[GO:0042753 "positive regulation of circadian rhythm" evidence=IEA]
[GO:0043122 "regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0031648 "protein destabilization" evidence=IMP] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0045862 "positive
regulation of proteolysis" evidence=IMP] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0016032
"viral reproduction" evidence=TAS] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=TAS] [GO:0051437 "positive regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0051439 "regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=TAS] [GO:0045879 "negative regulation of
smoothened signaling pathway" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0045892 Reactome:REACT_115566 GO:GO:0019048 GO:GO:0007165
GO:GO:0045893 GO:GO:0016032 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016874 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0016567
GO:GO:0051726 GO:GO:0043433 GO:GO:0019005 GO:GO:0045862
GO:GO:0000209 GO:GO:0031145 GO:GO:0051437 GO:GO:0071407
Reactome:REACT_24941 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0045879 GO:GO:0042753 PDB:1P22
PDBsum:1P22 EMBL:AL627424 EMBL:AF101784 EMBL:Y14153 EMBL:AF129530
EMBL:GU727631 EMBL:AK313353 EMBL:AL133387 EMBL:AL445463
EMBL:BC027994 IPI:IPI00307418 IPI:IPI00413142 RefSeq:NP_003930.1
RefSeq:NP_378663.1 UniGene:Hs.643802 UniGene:Hs.713753 PDB:2P64
PDBsum:2P64 ProteinModelPortal:Q9Y297 SMR:Q9Y297 DIP:DIP-31607N
IntAct:Q9Y297 MINT:MINT-108636 STRING:Q9Y297 PhosphoSite:Q9Y297
DMDM:13124271 PRIDE:Q9Y297 DNASU:8945 Ensembl:ENST00000370187
Ensembl:ENST00000408038 GeneID:8945 KEGG:hsa:8945 UCSC:uc001kta.3
UCSC:uc001ktb.3 CTD:8945 GeneCards:GC10P103103 HGNC:HGNC:1144
HPA:CAB032986 MIM:603482 neXtProt:NX_Q9Y297 PharmGKB:PA25465
HOGENOM:HOG000006638 HOVERGEN:HBG002521 InParanoid:Q9Y297 KO:K03362
OMA:NAYLKPM OrthoDB:EOG4F1X2M PhylomeDB:Q9Y297 ChiTaRS:BTRC
EvolutionaryTrace:Q9Y297 GenomeRNAi:8945 NextBio:33645
ArrayExpress:Q9Y297 Bgee:Q9Y297 CleanEx:HS_BTRC
Genevestigator:Q9Y297 Uniprot:Q9Y297
Length = 605
Score = 232 (86.7 bits), Expect = 7.8e-17, P = 7.8e-17
Identities = 78/244 (31%), Positives = 120/244 (49%)
Query: 114 LGDRAIKLLMPKNHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSD 173
L D IK+ KN ++ +R T H +V L L DE ++ + S D T+++W +
Sbjct: 320 LRDNTIKI-WDKNTLECKRILT----GHTGSV--LCLQYDERVIITGSSDSTVRVWDVNT 372
Query: 174 FKCLESITNAHDDAINAVALSDDGDVYTGSADKKIKVW-RRSPGNKKHSLVDVLERHNSG 232
+ L ++ + H +A+ + ++ G + T S D+ I VW SP + +L VL H +
Sbjct: 373 GEMLNTLIH-HCEAVLHLRFNN-GMMVTCSKDRSIAVWDMASPTDI--TLRRVLVGHRAA 428
Query: 233 INALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSG 292
+N + D + S + DR+I VW + V L GH + I C+ LV SG
Sbjct: 429 VNVVDF--DDKYIVSASGDRTIKVWNTSTCE----FVRTLNGHKRGIACLQYRDRLVVSG 482
Query: 293 SADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIK 352
S+D TIR+W I+ CL VLEGH V+C+ DN R + SG+ D IK
Sbjct: 483 SSDNTIRLW-DIECG-ACLRVLEGHEELVRCIR--FDNKR---------IVSGAYDGKIK 529
Query: 353 VWQI 356
VW +
Sbjct: 530 VWDL 533
Score = 164 (62.8 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 81/320 (25%), Positives = 129/320 (40%)
Query: 1 QHNLSVVDHHCLT-TLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLS 59
+H+L + HC + T KG V L + + +G DN ++ WD NT L
Sbjct: 290 RHSLQRI--HCRSETSKG----VYCLQYDDQKIVSGLRDNTIKIWDKNT---------LE 334
Query: 60 NNNIVAVGKGAVKSLVVLADKLFSAHQDHKIRVWKINNQEPD-----------HQKYTRL 108
I+ G+V L + + D +RVW +N E H ++
Sbjct: 335 CKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNG 394
Query: 109 ATLPTLGDRAIKL--LMPKNHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTI 166
+ DR+I + + + +RR V H AV+ + D+ + S S DRTI
Sbjct: 395 MMVTCSKDRSIAVWDMASPTDITLRR----VLVGHRAAVNVVDF--DDKYIVSASGDRTI 448
Query: 167 KIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVL 226
K+W TS + + ++ N H I + D V +GS+D I++W G + + VL
Sbjct: 449 KVWNTSTCEFVRTL-NGHKRGIACLQYRDRL-VVSGSSDNTIRLWDIECG----ACLRVL 502
Query: 227 ERHNSGINALALSCDGSVLYSGACDRSIIVWE-----KEEDDGNILVVGALRGHTKSILC 281
E H + + D + SGA D I VW+ L + L H+ +
Sbjct: 503 EGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFR 560
Query: 282 MAVVSDLVCSGSADKTIRIW 301
+ + S S D TI IW
Sbjct: 561 LQFDEFQIVSSSHDDTILIW 580
Score = 161 (61.7 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 47/177 (26%), Positives = 83/177 (46%)
Query: 150 LTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSADKKIK 209
L D+ + S D TIKIW + +C +T H ++ + D+ + TGS+D ++
Sbjct: 309 LQYDDQKIVSGLRDNTIKIWDKNTLECKRILTG-HTGSVLCLQY-DERVIITGSSDSTVR 366
Query: 210 VWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVV 269
VW + G ++L+ H + L L + ++ + + DRSI VW+ +I +
Sbjct: 367 VWDVNTGEMLNTLI----HHCEAV--LHLRFNNGMMVTCSKDRSIAVWDMASPT-DITLR 419
Query: 270 GALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTC--LAVLEGHRGPVKCL 324
L GH ++ + + S S D+TI++W TC + L GH+ + CL
Sbjct: 420 RVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWN----TSTCEFVRTLNGHKRGIACL 472
Score = 142 (55.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 66/260 (25%), Positives = 108/260 (41%)
Query: 11 CLTTLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGA 70
C L GH V L + + TGSSD+ VR WD NT E L N ++ + A
Sbjct: 335 CKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNT------GEML--NTLIHHCE-A 385
Query: 71 VKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYT----RLAT-LPTLGDRAIKLLMPK 125
V L + + +D I VW + + + R A + D+ I
Sbjct: 386 VLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGD 445
Query: 126 NHVQIRRHKTCTWVHHVDAVS-ALA-LTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA 183
+++ TC +V ++ +A L + L+ S S D TI++W CL +
Sbjct: 446 RTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLR-VLEG 504
Query: 184 HDDAINAVALSDDGDVYTGSADKKIKVW----RRSPGNKKHSL-VDVLERHNSGINALAL 238
H++ + + D+ + +G+ D KIKVW P +L + L H SG L
Sbjct: 505 HEELVRCIRF-DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEH-SG-RVFRL 561
Query: 239 SCDGSVLYSGACDRSIIVWE 258
D + S + D +I++W+
Sbjct: 562 QFDEFQIVSSSHDDTILIWD 581
>UNIPROTKB|F1NYG1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0006470
"protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0042753 OMA:NAYLKPM GeneTree:ENSGT00690000101849
EMBL:AADN02046404 IPI:IPI00684527 Ensembl:ENSGALT00000033197
Uniprot:F1NYG1
Length = 605
Score = 231 (86.4 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 78/244 (31%), Positives = 120/244 (49%)
Query: 114 LGDRAIKLLMPKNHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSD 173
L D IK+ KN ++ +R T H +V L L DE ++ + S D T+++W +
Sbjct: 320 LRDNTIKI-WDKNTLECKRILT----GHTGSV--LCLQYDERVIITGSSDSTVRVWDVNA 372
Query: 174 FKCLESITNAHDDAINAVALSDDGDVYTGSADKKIKVW-RRSPGNKKHSLVDVLERHNSG 232
+ L ++ + H +A+ + ++ G + T S D+ I VW SP + +L VL H +
Sbjct: 373 GEMLNTLIH-HCEAVLHLRFNN-GMMVTCSKDRSIAVWDMASPTDI--TLRRVLVGHRAA 428
Query: 233 INALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSG 292
+N + D + S + DR+I VW + V L GH + I C+ LV SG
Sbjct: 429 VNVVDF--DDKYIVSASGDRTIKVWNTSTCE----FVRTLNGHKRGIACLQYRDRLVVSG 482
Query: 293 SADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIK 352
S+D TIR+W I+ CL VLEGH V+C+ DN R + SG+ D IK
Sbjct: 483 SSDNTIRLW-DIECG-ACLRVLEGHEELVRCIR--FDNKR---------IVSGAYDGKIK 529
Query: 353 VWQI 356
VW +
Sbjct: 530 VWDL 533
Score = 162 (62.1 bits), Expect = 8.2e-09, P = 8.2e-09
Identities = 81/320 (25%), Positives = 129/320 (40%)
Query: 1 QHNLSVVDHHCLT-TLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLS 59
+H+L + HC + T KG V L + + +G DN ++ WD NT L
Sbjct: 290 RHSLQRI--HCRSETSKG----VYCLQYDDQKIVSGLRDNTIKIWDKNT---------LE 334
Query: 60 NNNIVAVGKGAVKSLVVLADKLFSAHQDHKIRVWKINNQEPD-----------HQKYTRL 108
I+ G+V L + + D +RVW +N E H ++
Sbjct: 335 CKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNG 394
Query: 109 ATLPTLGDRAIKL--LMPKNHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTI 166
+ DR+I + + + +RR V H AV+ + D+ + S S DRTI
Sbjct: 395 MMVTCSKDRSIAVWDMASPTDITLRR----VLVGHRAAVNVVDF--DDKYIVSASGDRTI 448
Query: 167 KIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVL 226
K+W TS + + ++ N H I + D V +GS+D I++W G + + VL
Sbjct: 449 KVWNTSTCEFVRTL-NGHKRGIACLQYRDRL-VVSGSSDNTIRLWDIECG----ACLRVL 502
Query: 227 ERHNSGINALALSCDGSVLYSGACDRSIIVWE-----KEEDDGNILVVGALRGHTKSILC 281
E H + + D + SGA D I VW+ L + L H+ +
Sbjct: 503 EGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFR 560
Query: 282 MAVVSDLVCSGSADKTIRIW 301
+ + S S D TI IW
Sbjct: 561 LQFDEFQIVSSSHDDTILIW 580
Score = 161 (61.7 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 47/177 (26%), Positives = 83/177 (46%)
Query: 150 LTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSADKKIK 209
L D+ + S D TIKIW + +C +T H ++ + D+ + TGS+D ++
Sbjct: 309 LQYDDQKIVSGLRDNTIKIWDKNTLECKRILTG-HTGSVLCLQY-DERVIITGSSDSTVR 366
Query: 210 VWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVV 269
VW + G ++L+ H + L L + ++ + + DRSI VW+ +I +
Sbjct: 367 VWDVNAGEMLNTLI----HHCEAV--LHLRFNNGMMVTCSKDRSIAVWDMASPT-DITLR 419
Query: 270 GALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTC--LAVLEGHRGPVKCL 324
L GH ++ + + S S D+TI++W TC + L GH+ + CL
Sbjct: 420 RVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWN----TSTCEFVRTLNGHKRGIACL 472
Score = 137 (53.3 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 65/260 (25%), Positives = 107/260 (41%)
Query: 11 CLTTLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGA 70
C L GH V L + + TGSSD+ VR WD N E L N ++ + A
Sbjct: 335 CKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNA------GEML--NTLIHHCE-A 385
Query: 71 VKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYT----RLAT-LPTLGDRAIKLLMPK 125
V L + + +D I VW + + + R A + D+ I
Sbjct: 386 VLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGD 445
Query: 126 NHVQIRRHKTCTWVHHVDAVS-ALA-LTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA 183
+++ TC +V ++ +A L + L+ S S D TI++W CL +
Sbjct: 446 RTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLR-VLEG 504
Query: 184 HDDAINAVALSDDGDVYTGSADKKIKVW----RRSPGNKKHSL-VDVLERHNSGINALAL 238
H++ + + D+ + +G+ D KIKVW P +L + L H SG L
Sbjct: 505 HEELVRCIRF-DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEH-SG-RVFRL 561
Query: 239 SCDGSVLYSGACDRSIIVWE 258
D + S + D +I++W+
Sbjct: 562 QFDEFQIVSSSHDDTILIWD 581
>CGD|CAL0005939 [details] [associations]
symbol:TUP1 species:5476 "Candida albicans" [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IGI;ISS;IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0045827 "negative regulation of isoprenoid metabolic process"
evidence=IMP] [GO:0009372 "quorum sensing" evidence=IMP]
[GO:0044409 "entry into host" evidence=IMP] [GO:0051834 "evasion or
tolerance of defenses of other organism involved in symbiotic
interaction" evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035690 "cellular
response to drug" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IEA] [GO:0000433 "negative regulation of
transcription from RNA polymerase II promoter by glucose"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0043156 "chromatin remodeling in
response to cation stress" evidence=IEA] [GO:0061418 "regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001198 "negative
regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IEA] [GO:1900429 "negative
regulation of filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0097308
"cellular response to farnesol" evidence=IMP] [GO:0036171
"filamentous growth of a population of unicellular organisms in
response to chemical stimulus" evidence=IMP] [GO:0044114
"development of symbiont in host" evidence=IMP] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] [GO:0036033 "mediator complex binding" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0001191
"RNA polymerase II transcription factor binding transcription
factor activity involved in negative regulation of transcription"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 229 (85.7 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 86/317 (27%), Positives = 158/317 (49%)
Query: 18 HNSYVSSLALA--GKFLYTG-SSDNEVRSWDCNTFSSELDQEFLSNN---NIVAVGKGAV 71
H+S V + + GKF+ TG + +V + ++L E + N N A G +
Sbjct: 199 HSSVVCCVRFSRDGKFIATGCNKTTQVFNVTTGELVAKLIDESSNENKDDNTTASGDLYI 258
Query: 72 KSLVVLAD-KLFSAHQDHK-IRVWKINNQE-----PDHQK--YTRLATLPTLGDRAIKLL 122
+S+ D KL + + K IR+W ++ + H++ Y+ L P GDR +
Sbjct: 259 RSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYS-LDFFPD-GDRLVSGS 316
Query: 123 MPKNHVQI--RRHKTCTWVHHV-DAVSALALTKDETLLYSVSWDRTIKIW-RTSDF--KC 176
++ V+I R C+ + D V+ +A++ D L+ + S DRT+++W T+ F +
Sbjct: 317 GDRS-VRIWDLRTSQCSLTLSIEDGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVER 375
Query: 177 LESIT---NAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLE-RHNS 231
L+S N H+D++ +VA S++G+ + +GS D+ +K+W + K S +V H
Sbjct: 376 LDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHKD 435
Query: 232 GINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAV------V 285
+ ++ + D + SG+ DR +I W++ GN L++ L+GH S++ +AV
Sbjct: 436 FVLSVCCTPDNEYILSGSKDRGVIFWDQAS--GNPLLM--LQGHRNSVISVAVSLNSKGT 491
Query: 286 SDLVCSGSADKTIRIWR 302
+ +GS D RIW+
Sbjct: 492 EGIFATGSGDCKARIWK 508
Score = 218 (81.8 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 62/222 (27%), Positives = 105/222 (47%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD-V 199
H + +L D L S S DR+++IW +C S+T + +D + VA+S DG +
Sbjct: 296 HEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQC--SLTLSIEDGVTTVAVSPDGKLI 353
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLER---HNSGINALALSCDGSVLYSGACDRSIIV 256
GS D+ ++VW + G L E H + ++A S +G + SG+ DR++ +
Sbjct: 354 AAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKL 413
Query: 257 WEKE-EDDGNILVVGALRGHTKSIL--CMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAV 313
W E + D GH +L C ++ + SGS D+ + W N L +
Sbjct: 414 WHLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQASGNP--LLM 471
Query: 314 LEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQ 355
L+GHR V +A +++ S T + +GS DC ++W+
Sbjct: 472 LQGHRNSVISVAVSLN-----SKGTEGIFATGSGDCKARIWK 508
Score = 183 (69.5 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 60/223 (26%), Positives = 108/223 (48%)
Query: 145 VSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD-VYTGS 203
+ ++ + D LL + + D+ I+IW S + ++ I H+ I ++ DGD + +GS
Sbjct: 258 IRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIK-ILRGHEQDIYSLDFFPDGDRLVSGS 316
Query: 204 ADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEE-- 261
D+ +++W + SL +E G+ +A+S DG ++ +G+ DR++ VW+
Sbjct: 317 GDRSVRIWDLR--TSQCSLTLSIE---DGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGF 371
Query: 262 -----DDGNILVVGALRGHTKSILCMAVVS--DLVCSGSADKTIRIWR--G-IDRNYTCL 311
D GN G GH S+ +A + + + SGS D+T+++W G D+ TC
Sbjct: 372 LVERLDSGN--ENG--NGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCE 427
Query: 312 AVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVW 354
GH+ V + C + D Y++ SGS D + W
Sbjct: 428 VTYIGHKDFVLSV--------CCTPDNEYIL-SGSKDRGVIFW 461
Score = 150 (57.9 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 53/187 (28%), Positives = 90/187 (48%)
Query: 178 ESITNAHDDAINAVALSDDGDVY-TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINAL 236
++ T + D I +V S DG + TG+ DK I++W S K+ ++ +L H I +L
Sbjct: 248 DNTTASGDLYIRSVCFSPDGKLLATGAEDKLIRIWDLS--TKR--IIKILRGHEQDIYSL 303
Query: 237 ALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSA 294
DG L SG+ DRS+ +W+ + L + G T +AV D L+ +GS
Sbjct: 304 DFFPDGDRLVSGSGDRSVRIWDLRTSQCS-LTLSIEDGVTT----VAVSPDGKLIAAGSL 358
Query: 295 DKTIRIWRG-----IDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDC 349
D+T+R+W ++R + GH V +A + + ++ + SGSLD
Sbjct: 359 DRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQ---------IASGSLDR 409
Query: 350 DIKVWQI 356
+K+W +
Sbjct: 410 TVKLWHL 416
>UNIPROTKB|P0CY34 [details] [associations]
symbol:TUP1 "Transcriptional repressor TUP1" species:237561
"Candida albicans SC5314" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009372 "quorum sensing" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036171 "filamentous growth of a
population of unicellular organisms in response to chemical
stimulus" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0044114 "development of symbiont in host"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:0044409 "entry into host"
evidence=IMP] [GO:0045827 "negative regulation of isoprenoid
metabolic process" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IGI;IMP] [GO:0051834
"evasion or tolerance of defenses of other organism involved in
symbiotic interaction" evidence=IMP] [GO:0071216 "cellular response
to biotic stimulus" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0097308 "cellular response to
farnesol" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 229 (85.7 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 86/317 (27%), Positives = 158/317 (49%)
Query: 18 HNSYVSSLALA--GKFLYTG-SSDNEVRSWDCNTFSSELDQEFLSNN---NIVAVGKGAV 71
H+S V + + GKF+ TG + +V + ++L E + N N A G +
Sbjct: 199 HSSVVCCVRFSRDGKFIATGCNKTTQVFNVTTGELVAKLIDESSNENKDDNTTASGDLYI 258
Query: 72 KSLVVLAD-KLFSAHQDHK-IRVWKINNQE-----PDHQK--YTRLATLPTLGDRAIKLL 122
+S+ D KL + + K IR+W ++ + H++ Y+ L P GDR +
Sbjct: 259 RSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYS-LDFFPD-GDRLVSGS 316
Query: 123 MPKNHVQI--RRHKTCTWVHHV-DAVSALALTKDETLLYSVSWDRTIKIW-RTSDF--KC 176
++ V+I R C+ + D V+ +A++ D L+ + S DRT+++W T+ F +
Sbjct: 317 GDRS-VRIWDLRTSQCSLTLSIEDGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVER 375
Query: 177 LESIT---NAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLE-RHNS 231
L+S N H+D++ +VA S++G+ + +GS D+ +K+W + K S +V H
Sbjct: 376 LDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHKD 435
Query: 232 GINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAV------V 285
+ ++ + D + SG+ DR +I W++ GN L++ L+GH S++ +AV
Sbjct: 436 FVLSVCCTPDNEYILSGSKDRGVIFWDQAS--GNPLLM--LQGHRNSVISVAVSLNSKGT 491
Query: 286 SDLVCSGSADKTIRIWR 302
+ +GS D RIW+
Sbjct: 492 EGIFATGSGDCKARIWK 508
Score = 218 (81.8 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 62/222 (27%), Positives = 105/222 (47%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD-V 199
H + +L D L S S DR+++IW +C S+T + +D + VA+S DG +
Sbjct: 296 HEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQC--SLTLSIEDGVTTVAVSPDGKLI 353
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLER---HNSGINALALSCDGSVLYSGACDRSIIV 256
GS D+ ++VW + G L E H + ++A S +G + SG+ DR++ +
Sbjct: 354 AAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKL 413
Query: 257 WEKE-EDDGNILVVGALRGHTKSIL--CMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAV 313
W E + D GH +L C ++ + SGS D+ + W N L +
Sbjct: 414 WHLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQASGNP--LLM 471
Query: 314 LEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQ 355
L+GHR V +A +++ S T + +GS DC ++W+
Sbjct: 472 LQGHRNSVISVAVSLN-----SKGTEGIFATGSGDCKARIWK 508
Score = 183 (69.5 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 60/223 (26%), Positives = 108/223 (48%)
Query: 145 VSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD-VYTGS 203
+ ++ + D LL + + D+ I+IW S + ++ I H+ I ++ DGD + +GS
Sbjct: 258 IRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIK-ILRGHEQDIYSLDFFPDGDRLVSGS 316
Query: 204 ADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEE-- 261
D+ +++W + SL +E G+ +A+S DG ++ +G+ DR++ VW+
Sbjct: 317 GDRSVRIWDLR--TSQCSLTLSIE---DGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGF 371
Query: 262 -----DDGNILVVGALRGHTKSILCMAVVS--DLVCSGSADKTIRIWR--G-IDRNYTCL 311
D GN G GH S+ +A + + + SGS D+T+++W G D+ TC
Sbjct: 372 LVERLDSGN--ENG--NGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCE 427
Query: 312 AVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVW 354
GH+ V + C + D Y++ SGS D + W
Sbjct: 428 VTYIGHKDFVLSV--------CCTPDNEYIL-SGSKDRGVIFW 461
Score = 150 (57.9 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 53/187 (28%), Positives = 90/187 (48%)
Query: 178 ESITNAHDDAINAVALSDDGDVY-TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINAL 236
++ T + D I +V S DG + TG+ DK I++W S K+ ++ +L H I +L
Sbjct: 248 DNTTASGDLYIRSVCFSPDGKLLATGAEDKLIRIWDLS--TKR--IIKILRGHEQDIYSL 303
Query: 237 ALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSA 294
DG L SG+ DRS+ +W+ + L + G T +AV D L+ +GS
Sbjct: 304 DFFPDGDRLVSGSGDRSVRIWDLRTSQCS-LTLSIEDGVTT----VAVSPDGKLIAAGSL 358
Query: 295 DKTIRIWRG-----IDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDC 349
D+T+R+W ++R + GH V +A + + ++ + SGSLD
Sbjct: 359 DRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQ---------IASGSLDR 409
Query: 350 DIKVWQI 356
+K+W +
Sbjct: 410 TVKLWHL 416
>WB|WBGene00003009 [details] [associations]
symbol:lin-23 species:6239 "Caenorhabditis elegans"
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] [GO:0008285 "negative regulation of
cell proliferation" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0006898 GO:GO:0005737 GO:GO:0040007
GO:GO:0040010 GO:GO:0008285 GO:GO:0051301 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0010171 GO:GO:0040011 GO:GO:0048812 SUPFAM:SSF81383
GO:GO:0007049 GO:GO:0040035 GO:GO:0040015 EMBL:FO080748
HOGENOM:HOG000006638 KO:K03362 GeneTree:ENSGT00690000101849
EMBL:AF275253 PIR:T16607 RefSeq:NP_495285.1 UniGene:Cel.17632
ProteinModelPortal:Q09990 SMR:Q09990 STRING:Q09990 PaxDb:Q09990
EnsemblMetazoa:K10B2.1 GeneID:174058 KEGG:cel:CELE_K10B2.1
UCSC:K10B2.1 CTD:174058 WormBase:K10B2.1 InParanoid:Q09990
OMA:IKVWSMD NextBio:882327 Uniprot:Q09990
Length = 665
Score = 231 (86.4 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 72/238 (30%), Positives = 116/238 (48%)
Query: 126 NHVQI--RRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA 183
N ++I R+ +C+ + S L L D ++ S S D T+++W +C++++ +
Sbjct: 242 NTIKIWDRKDYSCSRILSGHTGSVLCLQYDNRVIISGSSDATVRVWDVETGECIKTLIH- 300
Query: 184 HDDAINAVALSDDGDVYTGSADKKIKVWRR-SPGNKKHSLVDVLERHNSGINALALSCDG 242
H +A+ + ++ G + T S D+ I VW SP + ++ VL H + +N + D
Sbjct: 301 HCEAVLHLRFAN-GIMVTCSKDRSIAVWDMVSP--RDITIRRVLVGHRAAVNVVDF--DD 355
Query: 243 SVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWR 302
+ S + DR+I VW + + V L GH + I C+ LV SGS+D TIR+W
Sbjct: 356 RYIVSASGDRTIKVWSMD----TLEFVRTLAGHRRGIACLQYRGRLVVSGSSDNTIRLW- 410
Query: 303 GIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQISFPL 360
I CL VLEGH V+C+ D R + SG+ D IKVW + L
Sbjct: 411 DIHSG-VCLRVLEGHEELVRCIR--FDEKR---------IVSGAYDGKIKVWDLQAAL 456
Score = 157 (60.3 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 47/175 (26%), Positives = 79/175 (45%)
Query: 150 LTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSADKKIK 209
L D+ + S D TIKIW D+ C I + H ++ + D+ + +GS+D ++
Sbjct: 228 LQYDDDKIVSGLRDNTIKIWDRKDYSC-SRILSGHTGSVLCLQY-DNRVIISGSSDATVR 285
Query: 210 VWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVV 269
VW G + L H + L L ++ + + DRSI VW+ +I +
Sbjct: 286 VWDVETGE----CIKTLIHHCEAV--LHLRFANGIMVTCSKDRSIAVWDMVSPR-DITIR 338
Query: 270 GALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCL 324
L GH ++ + + S S D+TI++W +D + L GHR + CL
Sbjct: 339 RVLVGHRAAVNVVDFDDRYIVSASGDRTIKVW-SMD-TLEFVRTLAGHRRGIACL 391
Score = 151 (58.2 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 66/258 (25%), Positives = 106/258 (41%)
Query: 79 DKLFSAHQDHKIRVWKINNQEPDH--QKYTRLATLPTLGDRAIKLLMPKNHVQIRRHKT- 135
DK+ S +D+ I++W + +T +R I V++ +T
Sbjct: 233 DKIVSGLRDNTIKIWDRKDYSCSRILSGHTGSVLCLQYDNRVIISGSSDATVRVWDVETG 292
Query: 136 -C--TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFK--CLESITNAHDDAINA 190
C T +HH +AV L ++ + S DR+I +W + + + H A+N
Sbjct: 293 ECIKTLIHHCEAVLHLRFANG--IMVTCSKDRSIAVWDMVSPRDITIRRVLVGHRAAVNV 350
Query: 191 VALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGAC 250
V DD + + S D+ IKVW V L H GI L G ++ SG+
Sbjct: 351 VDF-DDRYIVSASGDRTIKVWSMDT----LEFVRTLAGHRRGIACLQYR--GRLVVSGSS 403
Query: 251 DRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIW---RGID-- 305
D +I +W+ G L V L GH + + C+ + SG+ D I++W +D
Sbjct: 404 DNTIRLWDIHS--GVCLRV--LEGHEELVRCIRFDEKRIVSGAYDGKIKVWDLQAALDPR 459
Query: 306 --RNYTCLAVLEGHRGPV 321
+ CL L H G V
Sbjct: 460 ALSSEICLCSLVQHTGRV 477
Score = 135 (52.6 bits), Expect = 9.4e-06, P = 9.4e-06
Identities = 76/293 (25%), Positives = 119/293 (40%)
Query: 32 LYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAVKSLVVLADKLFSAHQDHKIR 91
+ +G DN ++ WD +S LS + G+V L + S D +R
Sbjct: 235 IVSGLRDNTIKIWDRKDYSCS---RILSGHT------GSVLCLQYDNRVIISGSSDATVR 285
Query: 92 VWKINNQEP-----DHQK---YTRLAT--LPTLG-DRAIKL--LMPKNHVQIRRHKTCTW 138
VW + E H + + R A + T DR+I + ++ + IRR
Sbjct: 286 VWDVETGECIKTLIHHCEAVLHLRFANGIMVTCSKDRSIAVWDMVSPRDITIRR----VL 341
Query: 139 VHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD 198
V H AV+ + D+ + S S DRTIK+W + + ++ H I L G
Sbjct: 342 VGHRAAVNVVDF--DDRYIVSASGDRTIKVWSMDTLEFVRTLAG-HRRGI--ACLQYRGR 396
Query: 199 -VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVW 257
V +GS+D I++W G + VLE H + + D + SGA D I VW
Sbjct: 397 LVVSGSSDNTIRLWDIHSG----VCLRVLEGHEELVRCIRF--DEKRIVSGAYDGKIKVW 450
Query: 258 EKEED-DGNIL----VVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGID 305
+ + D L + +L HT + + + S S D TI IW +D
Sbjct: 451 DLQAALDPRALSSEICLCSLVQHTGRVFRLQFDDFQIVSSSHDDTILIWDFLD 503
Score = 126 (49.4 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 30/107 (28%), Positives = 57/107 (53%)
Query: 211 WRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVG 270
W+R GN K + ++ ++ G+ L D + SG D +I +W++++ + +
Sbjct: 205 WKR--GNYKMTRINCQSENSKGV--YCLQYDDDKIVSGLRDNTIKIWDRKDYSCSRI--- 257
Query: 271 ALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGH 317
L GHT S+LC+ + ++ SGS+D T+R+W ++ C+ L H
Sbjct: 258 -LSGHTGSVLCLQYDNRVIISGSSDATVRVW-DVETG-ECIKTLIHH 301
>UNIPROTKB|Q09990 [details] [associations]
symbol:lin-23 "F-box/WD repeat-containing protein lin-23"
species:6239 "Caenorhabditis elegans" [GO:0005737 "cytoplasm"
evidence=NAS] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0008285
GO:GO:0051301 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010171 GO:GO:0040011
GO:GO:0048812 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0040035
GO:GO:0040015 EMBL:FO080748 HOGENOM:HOG000006638 KO:K03362
GeneTree:ENSGT00690000101849 EMBL:AF275253 PIR:T16607
RefSeq:NP_495285.1 UniGene:Cel.17632 ProteinModelPortal:Q09990
SMR:Q09990 STRING:Q09990 PaxDb:Q09990 EnsemblMetazoa:K10B2.1
GeneID:174058 KEGG:cel:CELE_K10B2.1 UCSC:K10B2.1 CTD:174058
WormBase:K10B2.1 InParanoid:Q09990 OMA:IKVWSMD NextBio:882327
Uniprot:Q09990
Length = 665
Score = 231 (86.4 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 72/238 (30%), Positives = 116/238 (48%)
Query: 126 NHVQI--RRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA 183
N ++I R+ +C+ + S L L D ++ S S D T+++W +C++++ +
Sbjct: 242 NTIKIWDRKDYSCSRILSGHTGSVLCLQYDNRVIISGSSDATVRVWDVETGECIKTLIH- 300
Query: 184 HDDAINAVALSDDGDVYTGSADKKIKVWRR-SPGNKKHSLVDVLERHNSGINALALSCDG 242
H +A+ + ++ G + T S D+ I VW SP + ++ VL H + +N + D
Sbjct: 301 HCEAVLHLRFAN-GIMVTCSKDRSIAVWDMVSP--RDITIRRVLVGHRAAVNVVDF--DD 355
Query: 243 SVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWR 302
+ S + DR+I VW + + V L GH + I C+ LV SGS+D TIR+W
Sbjct: 356 RYIVSASGDRTIKVWSMD----TLEFVRTLAGHRRGIACLQYRGRLVVSGSSDNTIRLW- 410
Query: 303 GIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQISFPL 360
I CL VLEGH V+C+ D R + SG+ D IKVW + L
Sbjct: 411 DIHSG-VCLRVLEGHEELVRCIR--FDEKR---------IVSGAYDGKIKVWDLQAAL 456
Score = 157 (60.3 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 47/175 (26%), Positives = 79/175 (45%)
Query: 150 LTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSADKKIK 209
L D+ + S D TIKIW D+ C I + H ++ + D+ + +GS+D ++
Sbjct: 228 LQYDDDKIVSGLRDNTIKIWDRKDYSC-SRILSGHTGSVLCLQY-DNRVIISGSSDATVR 285
Query: 210 VWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVV 269
VW G + L H + L L ++ + + DRSI VW+ +I +
Sbjct: 286 VWDVETGE----CIKTLIHHCEAV--LHLRFANGIMVTCSKDRSIAVWDMVSPR-DITIR 338
Query: 270 GALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCL 324
L GH ++ + + S S D+TI++W +D + L GHR + CL
Sbjct: 339 RVLVGHRAAVNVVDFDDRYIVSASGDRTIKVW-SMD-TLEFVRTLAGHRRGIACL 391
Score = 151 (58.2 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 66/258 (25%), Positives = 106/258 (41%)
Query: 79 DKLFSAHQDHKIRVWKINNQEPDH--QKYTRLATLPTLGDRAIKLLMPKNHVQIRRHKT- 135
DK+ S +D+ I++W + +T +R I V++ +T
Sbjct: 233 DKIVSGLRDNTIKIWDRKDYSCSRILSGHTGSVLCLQYDNRVIISGSSDATVRVWDVETG 292
Query: 136 -C--TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFK--CLESITNAHDDAINA 190
C T +HH +AV L ++ + S DR+I +W + + + H A+N
Sbjct: 293 ECIKTLIHHCEAVLHLRFANG--IMVTCSKDRSIAVWDMVSPRDITIRRVLVGHRAAVNV 350
Query: 191 VALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGAC 250
V DD + + S D+ IKVW V L H GI L G ++ SG+
Sbjct: 351 VDF-DDRYIVSASGDRTIKVWSMDT----LEFVRTLAGHRRGIACLQYR--GRLVVSGSS 403
Query: 251 DRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIW---RGID-- 305
D +I +W+ G L V L GH + + C+ + SG+ D I++W +D
Sbjct: 404 DNTIRLWDIHS--GVCLRV--LEGHEELVRCIRFDEKRIVSGAYDGKIKVWDLQAALDPR 459
Query: 306 --RNYTCLAVLEGHRGPV 321
+ CL L H G V
Sbjct: 460 ALSSEICLCSLVQHTGRV 477
Score = 135 (52.6 bits), Expect = 9.4e-06, P = 9.4e-06
Identities = 76/293 (25%), Positives = 119/293 (40%)
Query: 32 LYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAVKSLVVLADKLFSAHQDHKIR 91
+ +G DN ++ WD +S LS + G+V L + S D +R
Sbjct: 235 IVSGLRDNTIKIWDRKDYSCS---RILSGHT------GSVLCLQYDNRVIISGSSDATVR 285
Query: 92 VWKINNQEP-----DHQK---YTRLAT--LPTLG-DRAIKL--LMPKNHVQIRRHKTCTW 138
VW + E H + + R A + T DR+I + ++ + IRR
Sbjct: 286 VWDVETGECIKTLIHHCEAVLHLRFANGIMVTCSKDRSIAVWDMVSPRDITIRR----VL 341
Query: 139 VHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD 198
V H AV+ + D+ + S S DRTIK+W + + ++ H I L G
Sbjct: 342 VGHRAAVNVVDF--DDRYIVSASGDRTIKVWSMDTLEFVRTLAG-HRRGI--ACLQYRGR 396
Query: 199 -VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVW 257
V +GS+D I++W G + VLE H + + D + SGA D I VW
Sbjct: 397 LVVSGSSDNTIRLWDIHSG----VCLRVLEGHEELVRCIRF--DEKRIVSGAYDGKIKVW 450
Query: 258 EKEED-DGNIL----VVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGID 305
+ + D L + +L HT + + + S S D TI IW +D
Sbjct: 451 DLQAALDPRALSSEICLCSLVQHTGRVFRLQFDDFQIVSSSHDDTILIWDFLD 503
Score = 126 (49.4 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 30/107 (28%), Positives = 57/107 (53%)
Query: 211 WRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVG 270
W+R GN K + ++ ++ G+ L D + SG D +I +W++++ + +
Sbjct: 205 WKR--GNYKMTRINCQSENSKGV--YCLQYDDDKIVSGLRDNTIKIWDRKDYSCSRI--- 257
Query: 271 ALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGH 317
L GHT S+LC+ + ++ SGS+D T+R+W ++ C+ L H
Sbjct: 258 -LSGHTGSVLCLQYDNRVIISGSSDATVRVW-DVETG-ECIKTLIHH 301
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 182 (69.1 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 67/220 (30%), Positives = 99/220 (45%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H +V+ L D LLYS S DRTIK+WR D ++ H +N +ALS D +
Sbjct: 196 HTQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTL-QGHGHWVNTMALSTDYALR 253
Query: 201 TGSADK-KIKVWRRSPGNKKHSLVD-VLERHNSGINALALSCDGSVLYSGACDRSIIVWE 258
TG+ + + + + L D L R+N L L SG+ D ++ +W
Sbjct: 254 TGAFEPAEASINAQDLQGSLQELKDRALRRYN-----LVRGQGPERLVSGSDDFTLFMWS 308
Query: 259 KEEDDGNILVVGALRGHTKSI--LCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEG 316
ED + + GH I + + S ++ S S DK+I++W G Y LA L G
Sbjct: 309 PAEDKKPL---ARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKY--LASLRG 363
Query: 317 HRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
H V +A + D S L+ SGS D +KVW +
Sbjct: 364 HVAAVYQIAWSAD---------SRLLVSGSSDSTLKVWDV 394
Score = 159 (61.0 bits), Expect = 6.7e-14, Sum P(2) = 6.7e-14
Identities = 58/198 (29%), Positives = 93/198 (46%)
Query: 159 SVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNK 218
S S D ++++W T+ +C E I H ++ + DG +Y+ S D+ IKVWR G
Sbjct: 172 SSSKDGSVRVWDTTAGRC-ERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDG-- 228
Query: 219 KHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNI--LVVGALRGHT 276
L L+ H +N +ALS D + L +GA + + ++ G++ L ALR +
Sbjct: 229 --VLCRTLQGHGHWVNTMALSTDYA-LRTGAFEPAEASINAQDLQGSLQELKDRALRRYN 285
Query: 277 KSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSS 336
L + + SGS D T+ +W + LA + GH+ A+ N S
Sbjct: 286 ---LVRGQGPERLVSGSDDFTLFMWSPAEDKKP-LARMTGHQ--------ALINQVLFSP 333
Query: 337 DTSYLVCSGSLDCDIKVW 354
D S ++ S S D IK+W
Sbjct: 334 D-SRIIASASFDKSIKLW 350
Score = 153 (58.9 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 62/222 (27%), Positives = 99/222 (44%)
Query: 121 LLMPKNHVQIRRHKTCT--WVHHVDAVSALALTKDETLLYSVSWDRTIKIW----RTSDF 174
+ P+ ++R CT H +AV ++A + L S S D T++ W T F
Sbjct: 42 IYQPQAIFRVRAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHF 101
Query: 175 KCLESITNAHDDAINAVALSDDGDVY-TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGI 233
C H + +++ S DG +G + +I +W S G + + VL H+ I
Sbjct: 102 TC-----QGHRHWVLSISWSPDGKTLASGCKNGQILLWDPSTGKQ---VGRVLAGHSKWI 153
Query: 234 NALA---LSCDGSVLY--SGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD- 287
L+ L + Y S + D S+ VW+ G + L GHT+S+ C+ D
Sbjct: 154 TGLSWEPLHANPECRYMASSSKDGSVRVWDTTA--GRCERI--LTGHTQSVTCLRWGGDG 209
Query: 288 LVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAID 329
L+ S S D+TI++WR D C L+GH V +A + D
Sbjct: 210 LLYSASQDRTIKVWRAHD-GVLC-RTLQGHGHWVNTMALSTD 249
Score = 143 (55.4 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 48/150 (32%), Positives = 68/150 (45%)
Query: 157 LYSVSWDRTIKIWRTS-DFKCLESITNAHDDAINAVALSDDGDVY-TGSADKKIKVWRRS 214
L S S D T+ +W + D K L +T H IN V S D + + S DK IK+W
Sbjct: 295 LVSGSDDFTLFMWSPAEDKKPLARMTG-HQALINQVLFSPDSRIIASASFDKSIKLWDGR 353
Query: 215 PGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRG 274
G SL H + + +A S D +L SG+ D ++ VW+ + + L G
Sbjct: 354 TGKYLASL----RGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQK----LAADLPG 405
Query: 275 HTKSILCMAVVSD--LVCSGSADKTIRIWR 302
H + + D V SG DK +RIWR
Sbjct: 406 HADEVYAVDWSPDGQRVASGGKDKCLRIWR 435
Score = 140 (54.3 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 58/215 (26%), Positives = 96/215 (44%)
Query: 14 TLKGHNSYVSSLALAGKF-LYTGS---SDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKG 69
TL+GH +V+++AL+ + L TG+ ++ + + D EL L N+V G+G
Sbjct: 233 TLQGHGHWVNTMALSTDYALRTGAFEPAEASINAQDLQGSLQELKDRALRRYNLVR-GQG 291
Query: 70 AVKSLVVLADKLFSAHQDHKIRVWK-INNQEP-----DHQKYTRLATLPTLGDRAIKLLM 123
++L S D + +W +++P HQ L + R I
Sbjct: 292 P--------ERLVSGSDDFTLFMWSPAEDKKPLARMTGHQALIN-QVLFSPDSRIIASAS 342
Query: 124 PKNHVQIRRHKTCTWVH----HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLES 179
+++ +T ++ HV AV +A + D LL S S D T+K+W K
Sbjct: 343 FDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAAD 402
Query: 180 ITNAHDDAINAVALSDDGD-VYTGSADKKIKVWRR 213
+ H D + AV S DG V +G DK +++WRR
Sbjct: 403 LPG-HADEVYAVDWSPDGQRVASGGKDKCLRIWRR 436
Score = 90 (36.7 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 11 CLTTLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNT 48
C ++L+GH+ V S+A + GK+L +GS D VR WD +T
Sbjct: 57 CTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLST 96
Score = 61 (26.5 bits), Expect = 4.8e-09, Sum P(2) = 4.8e-09
Identities = 21/90 (23%), Positives = 40/90 (44%)
Query: 15 LKGHNSYVSSLALAG-------KFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVG 67
L GH+ +++ L+ +++ + S D VR WD T + ++ + V
Sbjct: 146 LAGHSKWITGLSWEPLHANPECRYMASSSKDGSVRVWD--TTAGRCERILTGHTQSVTCL 203
Query: 68 KGAVKSLVVLADKLFSAHQDHKIRVWKINN 97
+ L L+SA QD I+VW+ ++
Sbjct: 204 RWGGDGL------LYSASQDRTIKVWRAHD 227
>UNIPROTKB|F1S8U2 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:CU469143 EMBL:CT737224
EMBL:CT737143 Ensembl:ENSSSCT00000011555 Uniprot:F1S8U2
Length = 506
Score = 227 (85.0 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 77/244 (31%), Positives = 120/244 (49%)
Query: 114 LGDRAIKLLMPKNHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSD 173
L D IK+ K+ ++ +R T H +V L L DE ++ + S D T+++W +
Sbjct: 221 LRDNTIKI-WDKSTLECKRILT----GHTGSV--LCLQYDERVIITGSSDSTVRVWDVNT 273
Query: 174 FKCLESITNAHDDAINAVALSDDGDVYTGSADKKIKVW-RRSPGNKKHSLVDVLERHNSG 232
+ L ++ + H +A+ + ++ G + T S D+ I VW SP + +L VL H +
Sbjct: 274 GEMLNTLIH-HCEAVLHLRFNN-GMMVTCSKDRSIAVWDMASPTDI--TLRRVLVGHRAA 329
Query: 233 INALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSG 292
+N + D + S + DR+I VW + V L GH + I C+ LV SG
Sbjct: 330 VNVVDF--DDKYIVSASGDRTIKVWNTSTCE----FVRTLNGHKRGIACLQYRDRLVVSG 383
Query: 293 SADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIK 352
S+D TIR+W I+ CL VLEGH V+C+ DN R + SG+ D IK
Sbjct: 384 SSDNTIRLW-DIECG-ACLRVLEGHEELVRCIR--FDNKR---------IVSGAYDGKIK 430
Query: 353 VWQI 356
VW +
Sbjct: 431 VWDL 434
Score = 164 (62.8 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 48/177 (27%), Positives = 83/177 (46%)
Query: 150 LTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSADKKIK 209
L D+ + S D TIKIW S +C +T H ++ + D+ + TGS+D ++
Sbjct: 210 LQYDDQKIVSGLRDNTIKIWDKSTLECKRILTG-HTGSVLCLQY-DERVIITGSSDSTVR 267
Query: 210 VWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVV 269
VW + G ++L+ H + L L + ++ + + DRSI VW+ +I +
Sbjct: 268 VWDVNTGEMLNTLI----HHCEAV--LHLRFNNGMMVTCSKDRSIAVWDMASPT-DITLR 320
Query: 270 GALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTC--LAVLEGHRGPVKCL 324
L GH ++ + + S S D+TI++W TC + L GH+ + CL
Sbjct: 321 RVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWN----TSTCEFVRTLNGHKRGIACL 373
Score = 159 (61.0 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 80/320 (25%), Positives = 129/320 (40%)
Query: 1 QHNLSVVDHHCLT-TLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLS 59
+H+L + HC + T KG V L + + +G DN ++ WD +T L
Sbjct: 191 RHSLQRI--HCRSETSKG----VYCLQYDDQKIVSGLRDNTIKIWDKST---------LE 235
Query: 60 NNNIVAVGKGAVKSLVVLADKLFSAHQDHKIRVWKINNQEPD-----------HQKYTRL 108
I+ G+V L + + D +RVW +N E H ++
Sbjct: 236 CKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNG 295
Query: 109 ATLPTLGDRAIKL--LMPKNHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTI 166
+ DR+I + + + +RR V H AV+ + D+ + S S DRTI
Sbjct: 296 MMVTCSKDRSIAVWDMASPTDITLRR----VLVGHRAAVNVVDF--DDKYIVSASGDRTI 349
Query: 167 KIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVL 226
K+W TS + + ++ N H I + D V +GS+D I++W G + + VL
Sbjct: 350 KVWNTSTCEFVRTL-NGHKRGIACLQYRDRL-VVSGSSDNTIRLWDIECG----ACLRVL 403
Query: 227 ERHNSGINALALSCDGSVLYSGACDRSIIVWE-----KEEDDGNILVVGALRGHTKSILC 281
E H + + D + SGA D I VW+ L + L H+ +
Sbjct: 404 EGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLIAALDPRAPAGTLCLRTLVEHSGRVFR 461
Query: 282 MAVVSDLVCSGSADKTIRIW 301
+ + S S D TI IW
Sbjct: 462 LQFDEFQIVSSSHDDTILIW 481
Score = 142 (55.0 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 66/260 (25%), Positives = 108/260 (41%)
Query: 11 CLTTLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGA 70
C L GH V L + + TGSSD+ VR WD NT E L N ++ + A
Sbjct: 236 CKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNT------GEML--NTLIHHCE-A 286
Query: 71 VKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYT----RLAT-LPTLGDRAIKLLMPK 125
V L + + +D I VW + + + R A + D+ I
Sbjct: 287 VLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGD 346
Query: 126 NHVQIRRHKTCTWVHHVDAVS-ALA-LTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA 183
+++ TC +V ++ +A L + L+ S S D TI++W CL +
Sbjct: 347 RTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLR-VLEG 405
Query: 184 HDDAINAVALSDDGDVYTGSADKKIKVW----RRSPGNKKHSL-VDVLERHNSGINALAL 238
H++ + + D+ + +G+ D KIKVW P +L + L H SG L
Sbjct: 406 HEELVRCIRF-DNKRIVSGAYDGKIKVWDLIAALDPRAPAGTLCLRTLVEH-SG-RVFRL 462
Query: 239 SCDGSVLYSGACDRSIIVWE 258
D + S + D +I++W+
Sbjct: 463 QFDEFQIVSSSHDDTILIWD 482
>SGD|S000002675 [details] [associations]
symbol:CIA1 "Component of cytosolic iron-sulfur protein
assembly (CIA) machinery" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0000055 "ribosomal
large subunit export from nucleus" evidence=IMP] [GO:0016226
"iron-sulfur cluster assembly" evidence=IGI;IMP] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0002098 "tRNA
wobble uridine modification" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000002675 GO:GO:0005829
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BK006938 GO:GO:0016226 EMBL:U51030 GO:GO:0002098 GO:GO:0000055
HOGENOM:HOG000208901 GeneTree:ENSGT00700000104486 OMA:TAIWENI
OrthoDB:EOG4CVKH5 PIR:S70127 RefSeq:NP_010553.3 RefSeq:NP_010559.3
PDB:2HES PDBsum:2HES ProteinModelPortal:Q05583 SMR:Q05583
DIP:DIP-1836N IntAct:Q05583 MINT:MINT-405749 STRING:Q05583
PaxDb:Q05583 PeptideAtlas:Q05583 EnsemblFungi:YDR267C GeneID:851860
GeneID:851866 KEGG:sce:YDR267C KEGG:sce:YDR273W CYGD:YDR267c
EvolutionaryTrace:Q05583 NextBio:969800 Genevestigator:Q05583
GermOnline:YDR267C Uniprot:Q05583
Length = 330
Score = 220 (82.5 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 59/209 (28%), Positives = 104/209 (49%)
Query: 156 LLYSVSWDRTIKIW--RTSDFKCLESITN-AHDDAINAVALSDDGDVYT-GSADKKIKVW 211
+L + S DR IK+ + DF ++ + AH AI +VA + GS D + +W
Sbjct: 26 ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIW 85
Query: 212 RRSPGNKKH---SLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILV 268
+ + L+ ++E H + + +A S DG L + + D+S+ +WE +E
Sbjct: 86 AKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYEC 145
Query: 269 VGALRGHTKSI--LCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAA 326
+ L+ H++ + + L+ S S D T+RIW+ D ++ C+AVL GH G V
Sbjct: 146 ISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVW---- 201
Query: 327 AIDNDRCDSSDTSYLVCSGSLDCDIKVWQ 355
+D D ++ + +CSGS D ++VW+
Sbjct: 202 --SSD-FDKTEGVFRLCSGSDDSTVRVWK 227
Score = 188 (71.2 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 63/232 (27%), Positives = 111/232 (47%)
Query: 108 LATLPTLGDRAIKLLMPKNHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIK 167
LAT T DR IKL+ K + H A+ ++A +LL + S+D T+
Sbjct: 27 LATGST--DRKIKLVSVK-YDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVS 83
Query: 168 IW---RTSD--FKC-LESITNAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKH 220
IW ++D F+ L +I H++ + VA S+DG + T S DK + +W +++
Sbjct: 84 IWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEY 143
Query: 221 SLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSIL 280
+ VL+ H+ + + ++L S + D ++ +W+ +DD + V L GH ++
Sbjct: 144 ECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAV--LNGHEGTVW 201
Query: 281 CMAVVSD----LVCSGSADKTIRIWR--GIDRN----YTCLAVL-EGHRGPV 321
+CSGS D T+R+W+ G D + + C A+L + H+ V
Sbjct: 202 SSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQV 253
Score = 138 (53.6 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 46/168 (27%), Positives = 81/168 (48%)
Query: 197 GDVYTGSADKKIKVWRRSPGNKKHSLVDVLER--HNSGINALALSCDGSVLYSGACDRSI 254
G + TGS D+KIK+ S +L+DVL+ H I ++A S+L +G+ D ++
Sbjct: 25 GILATGSTDRKIKLV--SVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTV 82
Query: 255 IVWEKEEDDGNIL---VVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIWRGID--RN 307
+W KEE ++ + GH + +A +D + + S DK++ IW +
Sbjct: 83 SIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEE 142
Query: 308 YTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQ 355
Y C++VL+ H VK + S+ L+ S S D +++W+
Sbjct: 143 YECISVLQEHSQDVKHVI-------WHPSEA--LLASSSYDDTVRIWK 181
>RGD|1359721 [details] [associations]
symbol:Btrc "beta-transducin repeat containing E3 ubiquitin
protein ligase" species:10116 "Rattus norvegicus" [GO:0000209
"protein polyubiquitination" evidence=IEA;ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;ISO] [GO:0006470
"protein dephosphorylation" evidence=IEA;ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;ISO]
[GO:0008013 "beta-catenin binding" evidence=IEA;ISO] [GO:0016567
"protein ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA;ISO] [GO:0030163 "protein catabolic
process" evidence=ISO] [GO:0031648 "protein destabilization"
evidence=IEA;ISO] [GO:0033598 "mammary gland epithelial cell
proliferation" evidence=IEA;ISO] [GO:0042753 "positive regulation
of circadian rhythm" evidence=IEA;ISO] [GO:0043122 "regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA;ISO] [GO:0045309
"protein phosphorylated amino acid binding" evidence=IEA;ISO]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA;ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA;ISO] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA;ISO]
[GO:0061136 "regulation of proteasomal protein catabolic process"
evidence=IEA;ISO] [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 CTD:8945 HOGENOM:HOG000006638 HOVERGEN:HBG002521
KO:K03362 OrthoDB:EOG4F1X2M EMBL:BC085125 IPI:IPI00951294
RefSeq:NP_001007149.2 UniGene:Rn.21800 SMR:Q5U4E5 STRING:Q5U4E5
Ensembl:ENSRNOT00000064259 GeneID:361765 KEGG:rno:361765
UCSC:RGD:1359721 InParanoid:Q5U4E5 NextBio:677539
Genevestigator:Q5U4E5 Uniprot:Q5U4E5
Length = 506
Score = 226 (84.6 bits), Expect = 2.7e-16, P = 2.7e-16
Identities = 77/244 (31%), Positives = 120/244 (49%)
Query: 114 LGDRAIKLLMPKNHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSD 173
L D IK+ K+ ++ +R T H +V L L DE ++ + S D T+++W +
Sbjct: 221 LRDNTIKI-WDKSTLECKRILT----GHTGSV--LCLQYDERVIITGSSDSTVRVWDVNA 273
Query: 174 FKCLESITNAHDDAINAVALSDDGDVYTGSADKKIKVW-RRSPGNKKHSLVDVLERHNSG 232
+ L ++ + H +A+ + ++ G + T S D+ I VW SP + +L VL H +
Sbjct: 274 GEMLNTLIH-HCEAVLHLRFNN-GMMVTCSKDRSIAVWDMASPTDI--TLRRVLVGHRAA 329
Query: 233 INALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSG 292
+N + D + S + DR+I VW + V L GH + I C+ LV SG
Sbjct: 330 VNVVDF--DDKYIVSASGDRTIKVWNTSTCE----FVRTLNGHKRGIACLQYRDRLVVSG 383
Query: 293 SADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIK 352
S+D TIR+W I+ CL VLEGH V+C+ DN R + SG+ D IK
Sbjct: 384 SSDNTIRLW-DIECG-ACLRVLEGHEELVRCIR--FDNKR---------IVSGAYDGKIK 430
Query: 353 VWQI 356
VW +
Sbjct: 431 VWDL 434
Score = 164 (62.8 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 48/177 (27%), Positives = 83/177 (46%)
Query: 150 LTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSADKKIK 209
L D+ + S D TIKIW S +C +T H ++ + D+ + TGS+D ++
Sbjct: 210 LQYDDQKIVSGLRDNTIKIWDKSTLECKRILTG-HTGSVLCLQY-DERVIITGSSDSTVR 267
Query: 210 VWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVV 269
VW + G ++L+ H + L L + ++ + + DRSI VW+ +I +
Sbjct: 268 VWDVNAGEMLNTLI----HHCEAV--LHLRFNNGMMVTCSKDRSIAVWDMASPT-DITLR 320
Query: 270 GALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTC--LAVLEGHRGPVKCL 324
L GH ++ + + S S D+TI++W TC + L GH+ + CL
Sbjct: 321 RVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWN----TSTCEFVRTLNGHKRGIACL 373
Score = 157 (60.3 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 80/320 (25%), Positives = 129/320 (40%)
Query: 1 QHNLSVVDHHCLT-TLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLS 59
+H+L + HC + T KG V L + + +G DN ++ WD +T L
Sbjct: 191 RHSLQRI--HCRSETSKG----VYCLQYDDQKIVSGLRDNTIKIWDKST---------LE 235
Query: 60 NNNIVAVGKGAVKSLVVLADKLFSAHQDHKIRVWKINNQEPD-----------HQKYTRL 108
I+ G+V L + + D +RVW +N E H ++
Sbjct: 236 CKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNG 295
Query: 109 ATLPTLGDRAIKL--LMPKNHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTI 166
+ DR+I + + + +RR V H AV+ + D+ + S S DRTI
Sbjct: 296 MMVTCSKDRSIAVWDMASPTDITLRR----VLVGHRAAVNVVDF--DDKYIVSASGDRTI 349
Query: 167 KIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVL 226
K+W TS + + ++ N H I + D V +GS+D I++W G + + VL
Sbjct: 350 KVWNTSTCEFVRTL-NGHKRGIACLQYRDRL-VVSGSSDNTIRLWDIECG----ACLRVL 403
Query: 227 ERHNSGINALALSCDGSVLYSGACDRSIIVWE-----KEEDDGNILVVGALRGHTKSILC 281
E H + + D + SGA D I VW+ L + L H+ +
Sbjct: 404 EGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLMAALDPRAPAGTLCLRTLVEHSGRVFR 461
Query: 282 MAVVSDLVCSGSADKTIRIW 301
+ + S S D TI IW
Sbjct: 462 LQFDEFQIVSSSHDDTILIW 481
Score = 137 (53.3 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 65/260 (25%), Positives = 107/260 (41%)
Query: 11 CLTTLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGA 70
C L GH V L + + TGSSD+ VR WD N E L N ++ + A
Sbjct: 236 CKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNA------GEML--NTLIHHCE-A 286
Query: 71 VKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYT----RLAT-LPTLGDRAIKLLMPK 125
V L + + +D I VW + + + R A + D+ I
Sbjct: 287 VLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGD 346
Query: 126 NHVQIRRHKTCTWVHHVDAVS-ALA-LTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA 183
+++ TC +V ++ +A L + L+ S S D TI++W CL +
Sbjct: 347 RTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLR-VLEG 405
Query: 184 HDDAINAVALSDDGDVYTGSADKKIKVW----RRSPGNKKHSL-VDVLERHNSGINALAL 238
H++ + + D+ + +G+ D KIKVW P +L + L H SG L
Sbjct: 406 HEELVRCIRF-DNKRIVSGAYDGKIKVWDLMAALDPRAPAGTLCLRTLVEH-SG-RVFRL 462
Query: 239 SCDGSVLYSGACDRSIIVWE 258
D + S + D +I++W+
Sbjct: 463 QFDEFQIVSSSHDDTILIWD 482
>UNIPROTKB|F1MVN1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:DAAA02058986 EMBL:DAAA02058987
EMBL:DAAA02058988 EMBL:DAAA02058989 EMBL:DAAA02058990
EMBL:DAAA02058991 IPI:IPI00717164 UniGene:Bt.25271
Ensembl:ENSBTAT00000009830 Uniprot:F1MVN1
Length = 569
Score = 227 (85.0 bits), Expect = 2.7e-16, P = 2.7e-16
Identities = 77/244 (31%), Positives = 120/244 (49%)
Query: 114 LGDRAIKLLMPKNHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSD 173
L D IK+ K+ ++ +R T H +V L L DE ++ + S D T+++W +
Sbjct: 284 LRDNTIKI-WDKSTLECKRILT----GHTGSV--LCLQYDERVIITGSSDSTVRVWDVNT 336
Query: 174 FKCLESITNAHDDAINAVALSDDGDVYTGSADKKIKVW-RRSPGNKKHSLVDVLERHNSG 232
+ L ++ + H +A+ + ++ G + T S D+ I VW SP + +L VL H +
Sbjct: 337 GEMLNTLIH-HCEAVLHLRFNN-GMMVTCSKDRSIAVWDMASPTDI--TLRRVLVGHRAA 392
Query: 233 INALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSG 292
+N + D + S + DR+I VW + V L GH + I C+ LV SG
Sbjct: 393 VNVVDF--DDKYIVSASGDRTIKVWNTSTCE----FVRTLNGHKRGIACLQYRDRLVVSG 446
Query: 293 SADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIK 352
S+D TIR+W I+ CL VLEGH V+C+ DN R + SG+ D IK
Sbjct: 447 SSDNTIRLW-DIECG-ACLRVLEGHEELVRCIR--FDNKR---------IVSGAYDGKIK 493
Query: 353 VWQI 356
VW +
Sbjct: 494 VWDL 497
Score = 164 (62.8 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 48/177 (27%), Positives = 83/177 (46%)
Query: 150 LTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSADKKIK 209
L D+ + S D TIKIW S +C +T H ++ + D+ + TGS+D ++
Sbjct: 273 LQYDDQKIVSGLRDNTIKIWDKSTLECKRILTG-HTGSVLCLQY-DERVIITGSSDSTVR 330
Query: 210 VWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVV 269
VW + G ++L+ H + L L + ++ + + DRSI VW+ +I +
Sbjct: 331 VWDVNTGEMLNTLI----HHCEAV--LHLRFNNGMMVTCSKDRSIAVWDMASPT-DITLR 383
Query: 270 GALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTC--LAVLEGHRGPVKCL 324
L GH ++ + + S S D+TI++W TC + L GH+ + CL
Sbjct: 384 RVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWN----TSTCEFVRTLNGHKRGIACL 436
Score = 159 (61.0 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 80/320 (25%), Positives = 129/320 (40%)
Query: 1 QHNLSVVDHHCLT-TLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLS 59
+H+L + HC + T KG V L + + +G DN ++ WD +T L
Sbjct: 254 RHSLQRI--HCRSETSKG----VYCLQYDDQKIVSGLRDNTIKIWDKST---------LE 298
Query: 60 NNNIVAVGKGAVKSLVVLADKLFSAHQDHKIRVWKINNQEPD-----------HQKYTRL 108
I+ G+V L + + D +RVW +N E H ++
Sbjct: 299 CKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNG 358
Query: 109 ATLPTLGDRAIKL--LMPKNHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTI 166
+ DR+I + + + +RR V H AV+ + D+ + S S DRTI
Sbjct: 359 MMVTCSKDRSIAVWDMASPTDITLRR----VLVGHRAAVNVVDF--DDKYIVSASGDRTI 412
Query: 167 KIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVL 226
K+W TS + + ++ N H I + D V +GS+D I++W G + + VL
Sbjct: 413 KVWNTSTCEFVRTL-NGHKRGIACLQYRDRL-VVSGSSDNTIRLWDIECG----ACLRVL 466
Query: 227 ERHNSGINALALSCDGSVLYSGACDRSIIVWE-----KEEDDGNILVVGALRGHTKSILC 281
E H + + D + SGA D I VW+ L + L H+ +
Sbjct: 467 EGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFR 524
Query: 282 MAVVSDLVCSGSADKTIRIW 301
+ + S S D TI IW
Sbjct: 525 LQFDEFQIVSSSHDDTILIW 544
Score = 142 (55.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 66/260 (25%), Positives = 108/260 (41%)
Query: 11 CLTTLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGA 70
C L GH V L + + TGSSD+ VR WD NT E L N ++ + A
Sbjct: 299 CKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNT------GEML--NTLIHHCE-A 349
Query: 71 VKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYT----RLAT-LPTLGDRAIKLLMPK 125
V L + + +D I VW + + + R A + D+ I
Sbjct: 350 VLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGD 409
Query: 126 NHVQIRRHKTCTWVHHVDAVS-ALA-LTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA 183
+++ TC +V ++ +A L + L+ S S D TI++W CL +
Sbjct: 410 RTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLR-VLEG 468
Query: 184 HDDAINAVALSDDGDVYTGSADKKIKVW----RRSPGNKKHSL-VDVLERHNSGINALAL 238
H++ + + D+ + +G+ D KIKVW P +L + L H SG L
Sbjct: 469 HEELVRCIRF-DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEH-SG-RVFRL 525
Query: 239 SCDGSVLYSGACDRSIIVWE 258
D + S + D +I++W+
Sbjct: 526 QFDEFQIVSSSHDDTILIWD 545
>UNIPROTKB|E2RDC4 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA] [GO:0061136 "regulation of proteasomal
protein catabolic process" evidence=IEA] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945 KO:K03362
OMA:NAYLKPM GeneTree:ENSGT00690000101849 EMBL:AAEX03015480
EMBL:AAEX03015479 RefSeq:XP_543980.3 ProteinModelPortal:E2RDC4
Ensembl:ENSCAFT00000015696 GeneID:486851 KEGG:cfa:486851
NextBio:20860562 Uniprot:E2RDC4
Length = 605
Score = 227 (85.0 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 77/244 (31%), Positives = 120/244 (49%)
Query: 114 LGDRAIKLLMPKNHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSD 173
L D IK+ K+ ++ +R T H +V L L DE ++ + S D T+++W +
Sbjct: 320 LRDNTIKI-WDKSTLECKRILT----GHTGSV--LCLQYDERVIITGSSDSTVRVWDVNT 372
Query: 174 FKCLESITNAHDDAINAVALSDDGDVYTGSADKKIKVW-RRSPGNKKHSLVDVLERHNSG 232
+ L ++ + H +A+ + ++ G + T S D+ I VW SP + +L VL H +
Sbjct: 373 GEMLNTLIH-HCEAVLHLRFNN-GMMVTCSKDRSIAVWDMASPTDI--TLRRVLVGHRAA 428
Query: 233 INALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSG 292
+N + D + S + DR+I VW + V L GH + I C+ LV SG
Sbjct: 429 VNVVDF--DDKYIVSASGDRTIKVWNTSTCE----FVRTLNGHKRGIACLQYRDRLVVSG 482
Query: 293 SADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIK 352
S+D TIR+W I+ CL VLEGH V+C+ DN R + SG+ D IK
Sbjct: 483 SSDNTIRLW-DIECG-ACLRVLEGHEELVRCIR--FDNKR---------IVSGAYDGKIK 529
Query: 353 VWQI 356
VW +
Sbjct: 530 VWDL 533
Score = 164 (62.8 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 48/177 (27%), Positives = 83/177 (46%)
Query: 150 LTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSADKKIK 209
L D+ + S D TIKIW S +C +T H ++ + D+ + TGS+D ++
Sbjct: 309 LQYDDQKIVSGLRDNTIKIWDKSTLECKRILTG-HTGSVLCLQY-DERVIITGSSDSTVR 366
Query: 210 VWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVV 269
VW + G ++L+ H + L L + ++ + + DRSI VW+ +I +
Sbjct: 367 VWDVNTGEMLNTLI----HHCEAV--LHLRFNNGMMVTCSKDRSIAVWDMASPT-DITLR 419
Query: 270 GALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTC--LAVLEGHRGPVKCL 324
L GH ++ + + S S D+TI++W TC + L GH+ + CL
Sbjct: 420 RVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWN----TSTCEFVRTLNGHKRGIACL 472
Score = 159 (61.0 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 80/320 (25%), Positives = 129/320 (40%)
Query: 1 QHNLSVVDHHCLT-TLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLS 59
+H+L + HC + T KG V L + + +G DN ++ WD +T L
Sbjct: 290 RHSLQRI--HCRSETSKG----VYCLQYDDQKIVSGLRDNTIKIWDKST---------LE 334
Query: 60 NNNIVAVGKGAVKSLVVLADKLFSAHQDHKIRVWKINNQEPD-----------HQKYTRL 108
I+ G+V L + + D +RVW +N E H ++
Sbjct: 335 CKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNG 394
Query: 109 ATLPTLGDRAIKL--LMPKNHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTI 166
+ DR+I + + + +RR V H AV+ + D+ + S S DRTI
Sbjct: 395 MMVTCSKDRSIAVWDMASPTDITLRR----VLVGHRAAVNVVDF--DDKYIVSASGDRTI 448
Query: 167 KIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVL 226
K+W TS + + ++ N H I + D V +GS+D I++W G + + VL
Sbjct: 449 KVWNTSTCEFVRTL-NGHKRGIACLQYRDRL-VVSGSSDNTIRLWDIECG----ACLRVL 502
Query: 227 ERHNSGINALALSCDGSVLYSGACDRSIIVWE-----KEEDDGNILVVGALRGHTKSILC 281
E H + + D + SGA D I VW+ L + L H+ +
Sbjct: 503 EGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFR 560
Query: 282 MAVVSDLVCSGSADKTIRIW 301
+ + S S D TI IW
Sbjct: 561 LQFDEFQIVSSSHDDTILIW 580
Score = 142 (55.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 66/260 (25%), Positives = 108/260 (41%)
Query: 11 CLTTLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGA 70
C L GH V L + + TGSSD+ VR WD NT E L N ++ + A
Sbjct: 335 CKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNT------GEML--NTLIHHCE-A 385
Query: 71 VKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYT----RLAT-LPTLGDRAIKLLMPK 125
V L + + +D I VW + + + R A + D+ I
Sbjct: 386 VLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGD 445
Query: 126 NHVQIRRHKTCTWVHHVDAVS-ALA-LTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA 183
+++ TC +V ++ +A L + L+ S S D TI++W CL +
Sbjct: 446 RTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLR-VLEG 504
Query: 184 HDDAINAVALSDDGDVYTGSADKKIKVW----RRSPGNKKHSL-VDVLERHNSGINALAL 238
H++ + + D+ + +G+ D KIKVW P +L + L H SG L
Sbjct: 505 HEELVRCIRF-DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEH-SG-RVFRL 561
Query: 239 SCDGSVLYSGACDRSIIVWE 258
D + S + D +I++W+
Sbjct: 562 QFDEFQIVSSSHDDTILIWD 581
>MGI|MGI:1338871 [details] [associations]
symbol:Btrc "beta-transducin repeat containing protein"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008013 "beta-catenin binding"
evidence=IDA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0031648
"protein destabilization" evidence=ISO] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IMP]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IDA] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IMP] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IMP] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IDA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
UniPathway:UPA00143 MGI:MGI:1338871 GO:GO:0005829 GO:GO:0005634
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH466534 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511
GO:GO:0019005 GO:GO:0004842 GO:GO:0045862 GO:GO:0008013
GO:GO:0000209 GO:GO:0071407 GO:GO:0045309 Reactome:REACT_109335
Reactome:REACT_24972 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OMA:NAYLKPM
OrthoDB:EOG4F1X2M EMBL:AF099932 EMBL:AF110396 EMBL:AF112979
EMBL:AF081887 EMBL:AF391190 EMBL:AF391178 EMBL:AF391179
EMBL:AF391180 EMBL:AF391181 EMBL:AF391182 EMBL:AF391183
EMBL:AF391184 EMBL:AF391185 EMBL:AF391186 EMBL:AF391187
EMBL:AF391188 EMBL:AF391189 EMBL:AK145624 EMBL:AK156660
EMBL:AK220183 EMBL:BC003989 IPI:IPI00402788 IPI:IPI00877195
RefSeq:NP_001032847.2 RefSeq:NP_033901.1 UniGene:Mm.119717
UniGene:Mm.446448 HSSP:Q9Y297 ProteinModelPortal:Q3ULA2 SMR:Q3ULA2
IntAct:Q3ULA2 STRING:Q3ULA2 PhosphoSite:Q3ULA2
Ensembl:ENSMUST00000065601 Ensembl:ENSMUST00000111936 GeneID:12234
KEGG:mmu:12234 UCSC:uc008hqy.2 UCSC:uc008hqz.2
GeneTree:ENSGT00690000101849 InParanoid:Q571K6 NextBio:280656
Bgee:Q3ULA2 Genevestigator:Q3ULA2 Uniprot:Q3ULA2
Length = 605
Score = 226 (84.6 bits), Expect = 4.1e-16, P = 4.1e-16
Identities = 77/244 (31%), Positives = 120/244 (49%)
Query: 114 LGDRAIKLLMPKNHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSD 173
L D IK+ K+ ++ +R T H +V L L DE ++ + S D T+++W +
Sbjct: 320 LRDNTIKI-WDKSTLECKRILT----GHTGSV--LCLQYDERVIITGSSDSTVRVWDVNA 372
Query: 174 FKCLESITNAHDDAINAVALSDDGDVYTGSADKKIKVW-RRSPGNKKHSLVDVLERHNSG 232
+ L ++ + H +A+ + ++ G + T S D+ I VW SP + +L VL H +
Sbjct: 373 GEMLNTLIH-HCEAVLHLRFNN-GMMVTCSKDRSIAVWDMASPTDI--TLRRVLVGHRAA 428
Query: 233 INALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSG 292
+N + D + S + DR+I VW + V L GH + I C+ LV SG
Sbjct: 429 VNVVDF--DDKYIVSASGDRTIKVWNTSTCE----FVRTLNGHKRGIACLQYRDRLVVSG 482
Query: 293 SADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIK 352
S+D TIR+W I+ CL VLEGH V+C+ DN R + SG+ D IK
Sbjct: 483 SSDNTIRLW-DIECG-ACLRVLEGHEELVRCIR--FDNKR---------IVSGAYDGKIK 529
Query: 353 VWQI 356
VW +
Sbjct: 530 VWDL 533
Score = 164 (62.8 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 48/177 (27%), Positives = 83/177 (46%)
Query: 150 LTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSADKKIK 209
L D+ + S D TIKIW S +C +T H ++ + D+ + TGS+D ++
Sbjct: 309 LQYDDQKIVSGLRDNTIKIWDKSTLECKRILTG-HTGSVLCLQY-DERVIITGSSDSTVR 366
Query: 210 VWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVV 269
VW + G ++L+ H + L L + ++ + + DRSI VW+ +I +
Sbjct: 367 VWDVNAGEMLNTLI----HHCEAV--LHLRFNNGMMVTCSKDRSIAVWDMASPT-DITLR 419
Query: 270 GALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTC--LAVLEGHRGPVKCL 324
L GH ++ + + S S D+TI++W TC + L GH+ + CL
Sbjct: 420 RVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWN----TSTCEFVRTLNGHKRGIACL 472
Score = 157 (60.3 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 80/320 (25%), Positives = 129/320 (40%)
Query: 1 QHNLSVVDHHCLT-TLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLS 59
+H+L + HC + T KG V L + + +G DN ++ WD +T L
Sbjct: 290 RHSLQRI--HCRSETSKG----VYCLQYDDQKIVSGLRDNTIKIWDKST---------LE 334
Query: 60 NNNIVAVGKGAVKSLVVLADKLFSAHQDHKIRVWKINNQEPD-----------HQKYTRL 108
I+ G+V L + + D +RVW +N E H ++
Sbjct: 335 CKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNG 394
Query: 109 ATLPTLGDRAIKL--LMPKNHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTI 166
+ DR+I + + + +RR V H AV+ + D+ + S S DRTI
Sbjct: 395 MMVTCSKDRSIAVWDMASPTDITLRR----VLVGHRAAVNVVDF--DDKYIVSASGDRTI 448
Query: 167 KIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVL 226
K+W TS + + ++ N H I + D V +GS+D I++W G + + VL
Sbjct: 449 KVWNTSTCEFVRTL-NGHKRGIACLQYRDRL-VVSGSSDNTIRLWDIECG----ACLRVL 502
Query: 227 ERHNSGINALALSCDGSVLYSGACDRSIIVWE-----KEEDDGNILVVGALRGHTKSILC 281
E H + + D + SGA D I VW+ L + L H+ +
Sbjct: 503 EGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLMAALDPRAPAGTLCLRTLVEHSGRVFR 560
Query: 282 MAVVSDLVCSGSADKTIRIW 301
+ + S S D TI IW
Sbjct: 561 LQFDEFQIVSSSHDDTILIW 580
Score = 137 (53.3 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 65/260 (25%), Positives = 107/260 (41%)
Query: 11 CLTTLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGA 70
C L GH V L + + TGSSD+ VR WD N E L N ++ + A
Sbjct: 335 CKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNA------GEML--NTLIHHCE-A 385
Query: 71 VKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYT----RLAT-LPTLGDRAIKLLMPK 125
V L + + +D I VW + + + R A + D+ I
Sbjct: 386 VLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGD 445
Query: 126 NHVQIRRHKTCTWVHHVDAVS-ALA-LTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA 183
+++ TC +V ++ +A L + L+ S S D TI++W CL +
Sbjct: 446 RTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLR-VLEG 504
Query: 184 HDDAINAVALSDDGDVYTGSADKKIKVW----RRSPGNKKHSL-VDVLERHNSGINALAL 238
H++ + + D+ + +G+ D KIKVW P +L + L H SG L
Sbjct: 505 HEELVRCIRF-DNKRIVSGAYDGKIKVWDLMAALDPRAPAGTLCLRTLVEH-SG-RVFRL 561
Query: 239 SCDGSVLYSGACDRSIIVWE 258
D + S + D +I++W+
Sbjct: 562 QFDEFQIVSSSHDDTILIWD 581
>UNIPROTKB|F1LMH8 [details] [associations]
symbol:Btrc "Protein Btrc" species:10116 "Rattus
norvegicus" [GO:0000209 "protein polyubiquitination" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 GeneTree:ENSGT00690000101849 IPI:IPI00372531
PRIDE:F1LMH8 Ensembl:ENSRNOT00000022426 ArrayExpress:F1LMH8
Uniprot:F1LMH8
Length = 605
Score = 226 (84.6 bits), Expect = 4.1e-16, P = 4.1e-16
Identities = 77/244 (31%), Positives = 120/244 (49%)
Query: 114 LGDRAIKLLMPKNHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSD 173
L D IK+ K+ ++ +R T H +V L L DE ++ + S D T+++W +
Sbjct: 320 LRDNTIKI-WDKSTLECKRILT----GHTGSV--LCLQYDERVIITGSSDSTVRVWDVNA 372
Query: 174 FKCLESITNAHDDAINAVALSDDGDVYTGSADKKIKVW-RRSPGNKKHSLVDVLERHNSG 232
+ L ++ + H +A+ + ++ G + T S D+ I VW SP + +L VL H +
Sbjct: 373 GEMLNTLIH-HCEAVLHLRFNN-GMMVTCSKDRSIAVWDMASPTDI--TLRRVLVGHRAA 428
Query: 233 INALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSG 292
+N + D + S + DR+I VW + V L GH + I C+ LV SG
Sbjct: 429 VNVVDF--DDKYIVSASGDRTIKVWNTSTCE----FVRTLNGHKRGIACLQYRDRLVVSG 482
Query: 293 SADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIK 352
S+D TIR+W I+ CL VLEGH V+C+ DN R + SG+ D IK
Sbjct: 483 SSDNTIRLW-DIECG-ACLRVLEGHEELVRCIR--FDNKR---------IVSGAYDGKIK 529
Query: 353 VWQI 356
VW +
Sbjct: 530 VWDL 533
Score = 164 (62.8 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 48/177 (27%), Positives = 83/177 (46%)
Query: 150 LTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSADKKIK 209
L D+ + S D TIKIW S +C +T H ++ + D+ + TGS+D ++
Sbjct: 309 LQYDDQKIVSGLRDNTIKIWDKSTLECKRILTG-HTGSVLCLQY-DERVIITGSSDSTVR 366
Query: 210 VWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVV 269
VW + G ++L+ H + L L + ++ + + DRSI VW+ +I +
Sbjct: 367 VWDVNAGEMLNTLI----HHCEAV--LHLRFNNGMMVTCSKDRSIAVWDMASPT-DITLR 419
Query: 270 GALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTC--LAVLEGHRGPVKCL 324
L GH ++ + + S S D+TI++W TC + L GH+ + CL
Sbjct: 420 RVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWN----TSTCEFVRTLNGHKRGIACL 472
Score = 157 (60.3 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 80/320 (25%), Positives = 129/320 (40%)
Query: 1 QHNLSVVDHHCLT-TLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLS 59
+H+L + HC + T KG V L + + +G DN ++ WD +T L
Sbjct: 290 RHSLQRI--HCRSETSKG----VYCLQYDDQKIVSGLRDNTIKIWDKST---------LE 334
Query: 60 NNNIVAVGKGAVKSLVVLADKLFSAHQDHKIRVWKINNQEPD-----------HQKYTRL 108
I+ G+V L + + D +RVW +N E H ++
Sbjct: 335 CKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNG 394
Query: 109 ATLPTLGDRAIKL--LMPKNHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTI 166
+ DR+I + + + +RR V H AV+ + D+ + S S DRTI
Sbjct: 395 MMVTCSKDRSIAVWDMASPTDITLRR----VLVGHRAAVNVVDF--DDKYIVSASGDRTI 448
Query: 167 KIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVL 226
K+W TS + + ++ N H I + D V +GS+D I++W G + + VL
Sbjct: 449 KVWNTSTCEFVRTL-NGHKRGIACLQYRDRL-VVSGSSDNTIRLWDIECG----ACLRVL 502
Query: 227 ERHNSGINALALSCDGSVLYSGACDRSIIVWE-----KEEDDGNILVVGALRGHTKSILC 281
E H + + D + SGA D I VW+ L + L H+ +
Sbjct: 503 EGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLMAALDPRAPAGTLCLRTLVEHSGRVFR 560
Query: 282 MAVVSDLVCSGSADKTIRIW 301
+ + S S D TI IW
Sbjct: 561 LQFDEFQIVSSSHDDTILIW 580
Score = 137 (53.3 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 65/260 (25%), Positives = 107/260 (41%)
Query: 11 CLTTLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGA 70
C L GH V L + + TGSSD+ VR WD N E L N ++ + A
Sbjct: 335 CKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNA------GEML--NTLIHHCE-A 385
Query: 71 VKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYT----RLAT-LPTLGDRAIKLLMPK 125
V L + + +D I VW + + + R A + D+ I
Sbjct: 386 VLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGD 445
Query: 126 NHVQIRRHKTCTWVHHVDAVS-ALA-LTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA 183
+++ TC +V ++ +A L + L+ S S D TI++W CL +
Sbjct: 446 RTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLR-VLEG 504
Query: 184 HDDAINAVALSDDGDVYTGSADKKIKVW----RRSPGNKKHSL-VDVLERHNSGINALAL 238
H++ + + D+ + +G+ D KIKVW P +L + L H SG L
Sbjct: 505 HEELVRCIRF-DNKRIVSGAYDGKIKVWDLMAALDPRAPAGTLCLRTLVEH-SG-RVFRL 561
Query: 239 SCDGSVLYSGACDRSIIVWE 258
D + S + D +I++W+
Sbjct: 562 QFDEFQIVSSSHDDTILIWD 581
>UNIPROTKB|E1BWK2 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031648 "protein destabilization"
evidence=IEA] [GO:0042347 "negative regulation of NF-kappaB import
into nucleus" evidence=IEA] [GO:0042753 "positive regulation of
circadian rhythm" evidence=IEA] [GO:0045862 "positive regulation of
proteolysis" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 GeneTree:ENSGT00690000101849 OMA:FDQWSEA
EMBL:AADN02035964 EMBL:AADN02035965 EMBL:AADN02035966
IPI:IPI00818493 Ensembl:ENSGALT00000041199 ArrayExpress:E1BWK2
Uniprot:E1BWK2
Length = 523
Score = 224 (83.9 bits), Expect = 5.2e-16, P = 5.2e-16
Identities = 71/217 (32%), Positives = 108/217 (49%)
Query: 146 SALALTKDETLLYSVSWDRTI-KIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSA 204
S L L DE ++ + S D T+ ++W + + L ++ + H++A+ + S+ G + T S
Sbjct: 262 SVLCLQYDERVIVTGSSDSTVSRVWDVNTGEVLNTLIH-HNEAVLHLRFSN-GLMVTCSK 319
Query: 205 DKKIKVW-RRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDD 263
D+ I VW SP + +L VL H + +N + D + S + DR+I VW +
Sbjct: 320 DRSIAVWDMASPTDI--TLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCE 375
Query: 264 GNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKC 323
V L GH + I C+ LV SGS+D TIR+W I+ CL VLEGH V+C
Sbjct: 376 ----FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW-DIECG-ACLRVLEGHEELVRC 429
Query: 324 LAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQISFPL 360
+ DN R + SG+ D IKVW + L
Sbjct: 430 IR--FDNKR---------IVSGAYDGKIKVWDLQAAL 455
Score = 162 (62.1 bits), Expect = 6.5e-09, P = 6.5e-09
Identities = 47/175 (26%), Positives = 85/175 (48%)
Query: 153 DETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSADKKI-KVW 211
DE ++ + D +IKIW + +CL+ +T H ++ + D+ + TGS+D + +VW
Sbjct: 230 DEKIISGLR-DNSIKIWDKTSLECLKVLTG-HTGSVLCLQY-DERVIVTGSSDSTVSRVW 286
Query: 212 RRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGA 271
+ G ++L+ HN + L L ++ + + DRSI VW+ +I +
Sbjct: 287 DVNTGEVLNTLI----HHNEAV--LHLRFSNGLMVTCSKDRSIAVWDMASPT-DITLRRV 339
Query: 272 LRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTC--LAVLEGHRGPVKCL 324
L GH ++ + + S S D+TI++W TC + L GH+ + CL
Sbjct: 340 LVGHRAAVNVVDFDDKYIVSASGDRTIKVWS----TSTCEFVRTLNGHKRGIACL 390
Score = 158 (60.7 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 61/195 (31%), Positives = 88/195 (45%)
Query: 137 TWVHHVDAVSALALTKDETLLYSVSWDRTIKIW---RTSDFKCLESITNAHDDAINAVAL 193
T +HH +AV L L L+ + S DR+I +W +D L + H A+N V
Sbjct: 296 TLIHHNEAV--LHLRFSNGLMVTCSKDRSIAVWDMASPTDIT-LRRVLVGHRAAVNVVDF 352
Query: 194 SDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRS 253
DD + + S D+ IKVW S V L H GI L D V+ SG+ D +
Sbjct: 353 -DDKYIVSASGDRTIKVWSTSTCE----FVRTLNGHKRGIACLQYR-DRLVV-SGSSDNT 405
Query: 254 IIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIW---RGID----R 306
I +W+ E G L V L GH + + C+ + + SG+ D I++W +D
Sbjct: 406 IRLWDIE--CGACLRV--LEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPA 461
Query: 307 NYTCLAVLEGHRGPV 321
+ CL L H G V
Sbjct: 462 STLCLRTLVEHSGRV 476
Score = 146 (56.5 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 67/261 (25%), Positives = 109/261 (41%)
Query: 11 CLTTLKGHNSYVSSLALAGKFLYTGSSDNEV-RSWDCNTFSSELDQEFLSNNNIVAVGKG 69
CL L GH V L + + TGSSD+ V R WD NT E+ + +N V +
Sbjct: 252 CLKVLTGHTGSVLCLQYDERVIVTGSSDSTVSRVWDVNT--GEVLNTLIHHNEAVLHLRF 309
Query: 70 AVKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYT----RLAT-LPTLGDRAIKLLMP 124
+ L+V K D I VW + + + R A + D+ I
Sbjct: 310 S-NGLMVTCSK------DRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASG 362
Query: 125 KNHVQIRRHKTCTWVHHVDAVS-ALA-LTKDETLLYSVSWDRTIKIWRTSDFKCLESITN 182
+++ TC +V ++ +A L + L+ S S D TI++W CL +
Sbjct: 363 DRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLR-VLE 421
Query: 183 AHDDAINAVALSDDGDVYTGSADKKIKVW----RRSPGNKKHSL-VDVLERHNSGINALA 237
H++ + + D+ + +G+ D KIKVW P +L + L H SG
Sbjct: 422 GHEELVRCIRF-DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEH-SG-RVFR 478
Query: 238 LSCDGSVLYSGACDRSIIVWE 258
L D + S + D +I++W+
Sbjct: 479 LQFDEFQIISSSHDDTILIWD 499
Score = 144 (55.7 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 79/321 (24%), Positives = 132/321 (41%)
Query: 1 QHNLSVVDHHCLTTLKGHNSY-VSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLS 59
+HNL + C + NS V L + + +G DN ++ WD + E L
Sbjct: 207 RHNLQRIQ--C----RSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSL------ECLK 254
Query: 60 NNNIVAVGKGAVKSLVVLADKLFSAHQDHKI-RVWKIN-----------NQEPDHQKYTR 107
++ G+V L + + D + RVW +N N+ H +++
Sbjct: 255 ---VLTGHTGSVLCLQYDERVIVTGSSDSTVSRVWDVNTGEVLNTLIHHNEAVLHLRFSN 311
Query: 108 LATLPTLGDRAIKL--LMPKNHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRT 165
+ DR+I + + + +RR V H AV+ + D+ + S S DRT
Sbjct: 312 GLMVTCSKDRSIAVWDMASPTDITLRR----VLVGHRAAVNVVDF--DDKYIVSASGDRT 365
Query: 166 IKIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDV 225
IK+W TS + + ++ N H I + D V +GS+D I++W G + + V
Sbjct: 366 IKVWSTSTCEFVRTL-NGHKRGIACLQYRDRL-VVSGSSDNTIRLWDIECG----ACLRV 419
Query: 226 LERHNSGINALALSCDGSVLYSGACDRSIIVWEKEE--DD---GNILVVGALRGHTKSIL 280
LE H + + D + SGA D I VW+ + D + L + L H+ +
Sbjct: 420 LEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVF 477
Query: 281 CMAVVSDLVCSGSADKTIRIW 301
+ + S S D TI IW
Sbjct: 478 RLQFDEFQIISSSHDDTILIW 498
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 218 (81.8 bits), Expect = 8.3e-16, P = 8.3e-16
Identities = 75/306 (24%), Positives = 147/306 (48%)
Query: 12 LTTLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSE--LDQEFLSNNNIVAVG 67
++T++GH +S++ + GKFL T S+D V+ W+ + S E L L N+
Sbjct: 72 ISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSA 131
Query: 68 KGAVKSLVVLAD-KLFSAHQDHKIRVWKINNQEPDHQ---KYTRLATLPTLG--DRAIKL 121
KS+V +D K ++ +++ K ++ + ++L G D ++++
Sbjct: 132 DS--KSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRI 189
Query: 122 LMPKNHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESIT 181
+ + ++ T H D VSA++ +D +L+ S S+D ++IW T++ +C++++
Sbjct: 190 WDVRTGMCVK-----TLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLV 244
Query: 182 NAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSC 240
+ + + V S +G + + + D +K+W G K E + I A
Sbjct: 245 DDENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKG-KTLKQYQGHENNKYCIFANFSVT 303
Query: 241 DGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAV--VSDLVCSGSA--DK 296
G + SG+ D I VW + + VV +L GHT++++ + +++ SG+ D
Sbjct: 304 GGKWIISGSEDCKIYVWNLQTKE----VVQSLEGHTQAVIASDCHPMQNMIASGALEPDN 359
Query: 297 TIRIWR 302
TIRIWR
Sbjct: 360 TIRIWR 365
Score = 144 (55.7 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 53/224 (23%), Positives = 93/224 (41%)
Query: 137 TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDD 196
T H V+ A + D + + S D+T+KI+ K +++ H + + +
Sbjct: 116 TLTGHKLGVNDFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTL-KGHTNYVFCCNFNPQ 174
Query: 197 GD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSII 255
V +GS D+ +++W G V L H+ ++A++ + DGS++ SG+ D +
Sbjct: 175 SSLVVSGSFDESVRIWDVRTG----MCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVR 230
Query: 256 VWEKEEDDGNILVVGALRGHTKSILCMAVVSD---LVCSGSADKTIRIWRGIDRNYTCLA 312
+W D N V L + S + S + D T+++W + T L
Sbjct: 231 IW----DTANGQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLW-DFGKGKT-LK 284
Query: 313 VLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
+GH C+ A S + SGS DC I VW +
Sbjct: 285 QYQGHENNKYCIFANF------SVTGGKWIISGSEDCKIYVWNL 322
>TAIR|locus:2148965 [details] [associations]
symbol:TOZ "AT5G16750" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA;IMP]
[GO:0009880 "embryonic pattern specification" evidence=RCA;IMP]
[GO:0051301 "cell division" evidence=RCA;IMP] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010182 "sugar mediated signaling
pathway" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048366
"leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GO:GO:0005730 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0009880 GO:GO:0006364
HSSP:P16649 GO:GO:0032040 EMBL:AL391147 HOGENOM:HOG000188765
KO:K14555 OMA:ADSKLIR IPI:IPI00523827 PIR:T51507 RefSeq:NP_568338.2
UniGene:At.24110 ProteinModelPortal:Q9LFE2 SMR:Q9LFE2 STRING:Q9LFE2
PRIDE:Q9LFE2 EnsemblPlants:AT5G16750.1 GeneID:831538
KEGG:ath:AT5G16750 TAIR:At5g16750 InParanoid:Q9LFE2
PhylomeDB:Q9LFE2 ProtClustDB:CLSN2680022 Genevestigator:Q9LFE2
Uniprot:Q9LFE2
Length = 876
Score = 200 (75.5 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 70/271 (25%), Positives = 128/271 (47%)
Query: 108 LATLPTLGDRAIKLLMPKNHVQIRRHK----TCTWV--HHVDAVSAL---ALTKDETLLY 158
+A + LGD L + N ++R + +C++V H + V +L + L+
Sbjct: 361 IADMKFLGDEEQFLAVATNLEEVRVYDVATMSCSYVLAGHKEVVLSLDTCVSSSGNVLIV 420
Query: 159 SVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY--TGSADKKIKVWR---- 212
+ S D+T+++W + C+ + H+ I AVA + + +GS D+ +KVW
Sbjct: 421 TGSKDKTVRLWNATSKSCI-GVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGI 479
Query: 213 ----RSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILV 268
P N K V+ H+ IN++A++ + S++ +G+ DR+ +W + ++
Sbjct: 480 SEDSEEPINLKTR--SVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPD----LVH 533
Query: 269 VGALRGHTKSILCM--AVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAA 326
V L+GH + I + + V V + S DKT++IW D + CL EGH V L A
Sbjct: 534 VVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGS--CLKTFEGHTSSV--LRA 589
Query: 327 AIDNDRCDSSDTSYLVCSGSLDCDIKVWQIS 357
+ D T ++ C D +K+W ++
Sbjct: 590 SFITD-----GTQFVSCGA--DGLLKLWNVN 613
Score = 169 (64.5 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 45/177 (25%), Positives = 81/177 (45%)
Query: 143 DAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY-T 201
D ++ALAL+ D+ LL+S R I++W KC+ S H+ + +A G + T
Sbjct: 61 DTLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRS-WKGHEGPVMGMACHASGGLLAT 119
Query: 202 GSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGS--VLYSGACDRSIIVWEK 259
AD+K+ VW G H H ++++ D + +L SG+ D ++ VW+
Sbjct: 120 AGADRKVLVWDVDGGFCTH----YFRGHKGVVSSILFHPDSNKNILISGSDDATVRVWDL 175
Query: 260 EEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIWRGIDRNYTCLAVL 314
+ + + H ++ +A+ D + S DK + +W D Y+C A +
Sbjct: 176 NAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLWDLHD--YSCKATV 230
Score = 162 (62.1 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 60/233 (25%), Positives = 108/233 (46%)
Query: 139 VHHVDAVSALALTKDETLLYSVSWD-RTIKIWRTSDFKCLESITNAHDDAINAV--ALSD 195
V + + ++ + DE +V+ + ++++ + C + H + + ++ +S
Sbjct: 355 VGYNEEIADMKFLGDEEQFLAVATNLEEVRVYDVATMSC-SYVLAGHKEVVLSLDTCVSS 413
Query: 196 DGDVY--TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDG-SVLYSGACDR 252
G+V TGS DK +++W + S + V HN I A+A + S SG+ DR
Sbjct: 414 SGNVLIVTGSKDKTVRLWNAT----SKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDR 469
Query: 253 SIIVW------EKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIWRGI 304
++ VW E E+ N+ + H K I +AV + LVC+GS D+T IWR
Sbjct: 470 TLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLP 529
Query: 305 DRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQIS 357
D + + L+GH+ + + + D+C V + S D +K+W IS
Sbjct: 530 DLVH--VVTLKGHKRRIFSVEFSTV-DQC--------VMTASGDKTVKIWAIS 571
Score = 146 (56.5 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 41/164 (25%), Positives = 74/164 (45%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSD-DGDV 199
H ++++A+ ++++L+ + S DRT IWR D + ++ H I +V S D V
Sbjct: 498 HDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTL-KGHKRRIFSVEFSTVDQCV 556
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEK 259
T S DK +K+W S G S + E H S + + DG+ S D + +W
Sbjct: 557 MTASGDKTVKIWAISDG----SCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNV 612
Query: 260 EEDDGNILVVGALRGHTKSILCMAV--VSDLVCSGSADKTIRIW 301
+ + H + +AV ++++ +G D I +W
Sbjct: 613 NTSE----CIATYDQHEDKVWALAVGKKTEMIATGGGDAVINLW 652
Score = 143 (55.4 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 67/281 (23%), Positives = 116/281 (41%)
Query: 11 CLTTLKGHNSYVSSL----ALAGKFLY-TGSSDNEVRSWDCNTFSSELDQEFLSNNNIVA 65
C L GH V SL + +G L TGS D VR W+ T S + N +I+A
Sbjct: 393 CSYVLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNA-TSKSCIGVGTGHNGDILA 451
Query: 66 VGKGAVKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLG--DRAIK-LL 122
V A KS S D ++VW ++ D ++ L T + D+ I +
Sbjct: 452 VAF-AKKSFSFFV----SGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINSVA 506
Query: 123 MPKNHVQI---RRHKTCT-W-----VH------HVDAVSALALTKDETLLYSVSWDRTIK 167
+ +N + +T + W VH H + ++ + + + + S D+T+K
Sbjct: 507 VARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVK 566
Query: 168 IWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLE 227
IW SD CL++ + A ++D + AD +K+W + + +
Sbjct: 567 IWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSE----CIATYD 622
Query: 228 RHNSGINALALSCDGSVLYSGACDRSIIVW------EKEED 262
+H + ALA+ ++ +G D I +W +KE+D
Sbjct: 623 QHEDKVWALAVGKKTEMIATGGGDAVINLWHDSTASDKEDD 663
Score = 134 (52.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 46/171 (26%), Positives = 79/171 (46%)
Query: 166 IKIWRTSDFKCLESITNAHDDAINAVALS-DDGDVYTGSADKKIKVWRRSPGNKKHSLVD 224
I I ++D ++S D + A+ALS DD +++ ++I+VW + +
Sbjct: 42 INIVDSTD-SSVKSTIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDL----ETLKCIR 96
Query: 225 VLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGH---TKSILC 281
+ H + +A G +L + DR ++VW+ DG RGH SIL
Sbjct: 97 SWKGHEGPVMGMACHASGGLLATAGADRKVLVWDV---DGGFCT-HYFRGHKGVVSSILF 152
Query: 282 MAVVS-DLVCSGSADKTIRIWRGIDRNYT--CLAVLEGHRGPVKCLAAAID 329
+ +++ SGS D T+R+W +N CLA++E H V +A + D
Sbjct: 153 HPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSED 203
Score = 131 (51.2 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 36/139 (25%), Positives = 68/139 (48%)
Query: 221 SLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSIL 280
S+ +E + + ALALS D +L+S R I VW+ E + + + +GH ++
Sbjct: 51 SVKSTIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLE----TLKCIRSWKGHEGPVM 106
Query: 281 CMAVVSD--LVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDT 338
MA + L+ + AD+ + +W +D + C GH+G V + D+++
Sbjct: 107 GMACHASGGLLATAGADRKVLVW-DVDGGF-CTHYFRGHKGVVSSILFHPDSNK------ 158
Query: 339 SYLVCSGSLDCDIKVWQIS 357
++ SGS D ++VW ++
Sbjct: 159 -NILISGSDDATVRVWDLN 176
Score = 69 (29.3 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 16/50 (32%), Positives = 26/50 (52%)
Query: 3 NLSVVDHHCLTTLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFS 50
N + CL ++ H S V+S+AL+ G L++ D V WD + +S
Sbjct: 176 NAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLWDLHDYS 225
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 210 (79.0 bits), Expect = 3.0e-15, P = 3.0e-15
Identities = 73/307 (23%), Positives = 138/307 (44%)
Query: 14 TLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFS---SELDQEFLSNNNIVAVGK 68
TL HN VSS+ + G+ L + S+D +R++ NT + +E QEF + N
Sbjct: 19 TLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHEN------ 72
Query: 69 GAVKSLVVLADKLF--SAHQDHKIRVWKINNQEP-----DHQKYTRLATLPTLGDRAIKL 121
+ + +D F SA D +++W + H Y + +
Sbjct: 73 -GISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSG 131
Query: 122 LMPKNHVQIRRHKT--CTWV--HHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCL 177
+ V+I T C V H D V+A+ +D +L+ S S+D +IW + C+
Sbjct: 132 SFDET-VRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCV 190
Query: 178 ESITNAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINAL 236
+++ + + ++ V S +G + G+ D +++W S + + +A
Sbjct: 191 KTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAF 250
Query: 237 ALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAV--VSDLVCSGSA 294
+++ +G + SG+ D + +WE ++ L GHT++++ +A +L+ SGS
Sbjct: 251 SVT-NGKRIVSGSEDNCVHMWELNSKK----LLQKLEGHTETVMNVACHPTENLIASGSL 305
Query: 295 DKTIRIW 301
DKT+RIW
Sbjct: 306 DKTVRIW 312
Score = 179 (68.1 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 52/224 (23%), Positives = 99/224 (44%)
Query: 137 TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDD 196
T + H + + ++ S S+D T++IW + KCL+ + AH D + AV + D
Sbjct: 108 TLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLK-VLPAHSDPVTAVDFNRD 166
Query: 197 GDVYTGSA-DKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSII 255
G + S+ D ++W G H + +++ N ++ + S +G + G D ++
Sbjct: 167 GSLIVSSSYDGLCRIWDSGTG---HCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLR 223
Query: 256 VWEKEEDDGNILVVGALRGHTKSILCMAVVSDL-----VCSGSADKTIRIWRGIDRNYTC 310
+W + + + GH + C++ + + SGS D + +W +
Sbjct: 224 LW----NISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKL-- 277
Query: 311 LAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVW 354
L LEGH V +A C ++ L+ SGSLD +++W
Sbjct: 278 LQKLEGHTETVMNVA-------CHPTEN--LIASGSLDKTVRIW 312
Score = 146 (56.5 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 48/221 (21%), Positives = 95/221 (42%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD-V 199
H + +S +A + D + S S D+T+K+W ++++ H + V + + +
Sbjct: 70 HENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIG-HTNYAFCVNFNPQSNMI 128
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEK 259
+GS D+ +++W + G + VL H+ + A+ + DGS++ S + D +W
Sbjct: 129 VSGSFDETVRIWDVTTGK----CLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIW-- 182
Query: 260 EEDDGNILVVGAL---RGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEG 316
D G V L S + + + G+ D T+R+W + L G
Sbjct: 183 --DSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKF--LKTYTG 238
Query: 317 HRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQIS 357
H C+++A S + SGS D + +W+++
Sbjct: 239 HVNAQYCISSAF------SVTNGKRIVSGSEDNCVHMWELN 273
Score = 145 (56.1 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 59/228 (25%), Positives = 100/228 (43%)
Query: 137 TWVHHVDAVSALALTKDETLLYSVSWDRTIKIW--RTSDFKCLESITN--AHDDAINAVA 192
T H AVS++ + D LL S S D+TI+ + T + E + H++ I+ VA
Sbjct: 19 TLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVA 78
Query: 193 LSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACD 251
S D + + S DK +K+W G SL+ L H + + + +++ SG+ D
Sbjct: 79 FSSDARFIVSASDDKTLKLWDVETG----SLIKTLIGHTNYAFCVNFNPQSNMIVSGSFD 134
Query: 252 RSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIWRGIDRNYT 309
++ +W+ G L V L H+ + + D L+ S S D RIW +
Sbjct: 135 ETVRIWDVTT--GKCLKV--LPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDS-GTGHC 189
Query: 310 CLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQIS 357
+++ PV + R + LV G+LD +++W IS
Sbjct: 190 VKTLIDDENPPVSFV-------RFSPNGKFILV--GTLDNTLRLWNIS 228
>DICTYBASE|DDB_G0269728 [details] [associations]
symbol:ciao1 "putative cytosolic iron-sulfur assembly
protein" species:44689 "Dictyostelium discoideum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0269728 EMBL:AAFI02000005
GenomeReviews:CM000150_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
HSSP:P63005 RefSeq:XP_646229.1 ProteinModelPortal:Q55DA2
STRING:Q55DA2 EnsemblProtists:DDB0266672 GeneID:8617183
KEGG:ddi:DDB_G0269728 ProtClustDB:CLSZ2497289 Uniprot:Q55DA2
Length = 333
Score = 211 (79.3 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 61/218 (27%), Positives = 104/218 (47%)
Query: 143 DAVSALALTKDETLLYSVSWDRTIKIW-RTSDFKC-LESITNAHDDAINAVALSDDGDVY 200
D V LA + +L + + D+ I+IW + ++ K L H+ + VA S G
Sbjct: 25 DKVWNLAWHPNGEILATCANDKYIQIWSKDTNGKWGLVQSLEGHEKTVRRVAWSPCGRFL 84
Query: 201 TGSA-DKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEK 259
G++ D +W +S + + V LE H + ++A G++L + + D+SI +W+
Sbjct: 85 AGASFDASTSIWEKSKDELEFTHVSSLEGHTYEVKSVAWDSTGTLLATCSRDKSIWIWQM 144
Query: 260 EED-DGNILVVGALRGHTKSILCMA--VVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEG 316
E+D D L + + GH + I C+ +L+ S S D TI+ W+ ID ++ C+ L G
Sbjct: 145 EDDNDFECLSINS--GHGQDIKCVLWHPNEELLASSSYDDTIKFWKDIDGDWECINTLTG 202
Query: 317 HRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVW 354
H + LA D D+ S LV D + + W
Sbjct: 203 HESSIWDLAFNKDGDKLVSCGEDKLVLFWKFDKENEKW 240
Score = 186 (70.5 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 57/188 (30%), Positives = 91/188 (48%)
Query: 173 DFKCLESITN-AHDDAINAVALSDDGDVYTGSA-DKKIKVWRRSPGNKKHSLVDVLERHN 230
+ K ++S+ A D + +A +G++ A DK I++W + N K LV LE H
Sbjct: 11 NLKLIDSMQKEAPYDKVWNLAWHPNGEILATCANDKYIQIWSKDT-NGKWGLVQSLEGHE 69
Query: 231 SGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--L 288
+ +A S G L + D S +WEK +D+ V +L GHT + +A S L
Sbjct: 70 KTVRRVAWSPCGRFLAGASFDASTSIWEKSKDELEFTHVSSLEGHTYEVKSVAWDSTGTL 129
Query: 289 VCSGSADKTIRIWRGIDRN-YTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSL 347
+ + S DK+I IW+ D N + CL++ GH +KC+ + + L+ S S
Sbjct: 130 LATCSRDKSIWIWQMEDDNDFECLSINSGHGQDIKCVLWHPNEE---------LLASSSY 180
Query: 348 DCDIKVWQ 355
D IK W+
Sbjct: 181 DDTIKFWK 188
Score = 150 (57.9 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 46/176 (26%), Positives = 84/176 (47%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRT--SDFKCLESITNAHDDAINAVALSDDGD 198
H + + +E LL S S+D TIK W+ D++C+ ++T H+ +I +A + DGD
Sbjct: 159 HGQDIKCVLWHPNEELLASSSYDDTIKFWKDIDGDWECINTLTG-HESSIWDLAFNKDGD 217
Query: 199 -VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSG-INALALSCDGSVLYSGACDRSIIV 256
+ + DK + W+ N+K + + NS I ++ S + + +G+ D SII
Sbjct: 218 KLVSCGEDKLVLFWKFDKENEKWINIFKFKNENSRPIYSIDWSSLTNTIVTGSADDSIIF 277
Query: 257 WEKEEDDGNI---LVVGALRGHTKSILCMA---VVSDLVCSGSADKTIRIWRGIDR 306
+E+E DD +++ H + C +++ S D I+IW D+
Sbjct: 278 YEQESDDTPDKYKIILKKKNAHDSDVNCTKWNPKFKNILASCGDDGFIKIWELQDK 333
Score = 142 (55.0 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 44/165 (26%), Positives = 85/165 (51%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRT---SDFKCLESITNAHDDAINAVALSDDG 197
H V ++A TLL + S D++I IW+ +DF+CL SI + H I V +
Sbjct: 114 HTYEVKSVAWDSTGTLLATCSRDKSIWIWQMEDDNDFECL-SINSGHGQDIKCVLWHPNE 172
Query: 198 DVYTGSA-DKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIV 256
++ S+ D IK W+ G+ + ++ L H S I LA + DG L S D+ ++
Sbjct: 173 ELLASSSYDDTIKFWKDIDGDWE--CINTLTGHESSIWDLAFNKDGDKLVSCGEDKLVLF 230
Query: 257 WEKEEDDGNILVVGALRG-HTKSILCM--AVVSDLVCSGSADKTI 298
W+ ++++ + + + +++ I + + +++ + +GSAD +I
Sbjct: 231 WKFDKENEKWINIFKFKNENSRPIYSIDWSSLTNTIVTGSADDSI 275
Score = 117 (46.2 bits), Expect = 0.00031, P = 0.00031
Identities = 45/170 (26%), Positives = 70/170 (41%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTS----DFKCLESITNAHDDAINAVALSDD 196
H V +A + L S+D + IW S +F + S+ H + +VA
Sbjct: 68 HEKTVRRVAWSPCGRFLAGASFDASTSIWEKSKDELEFTHVSSL-EGHTYEVKSVAWDST 126
Query: 197 GDVY-TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSII 255
G + T S DK I +W+ N L + H I + + +L S + D +I
Sbjct: 127 GTLLATCSRDKSIWIWQMEDDNDFECL-SINSGHGQDIKCVLWHPNEELLASSSYDDTIK 185
Query: 256 VWEKEEDDGNILVVGALRGHTKSILCMAVVSD---LVCSGSADKTIRIWR 302
W+ + DG+ + L GH SI +A D LV G DK + W+
Sbjct: 186 FWK--DIDGDWECINTLTGHESSIWDLAFNKDGDKLVSCGE-DKLVLFWK 232
>UNIPROTKB|F1NEH1 [details] [associations]
symbol:TRAF7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0000185 "activation of
MAPKKK activity" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IEA] [GO:0043410 "positive regulation of MAPK cascade"
evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR008974 InterPro:IPR013323 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089 PROSITE:PS50145
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 Pfam:PF00097
Prosite:PS00518 GO:GO:0043231 GO:GO:0005886 GO:GO:0006915
GO:GO:0042981 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043410 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 GeneTree:ENSGT00690000101849 GO:GO:0000185
OMA:ALCIQGN EMBL:AADN02023658 EMBL:AADN02023655 EMBL:AADN02023656
EMBL:AADN02023657 IPI:IPI00600547 Ensembl:ENSGALT00000009263
ArrayExpress:F1NEH1 Uniprot:F1NEH1
Length = 670
Score = 218 (81.8 bits), Expect = 4.3e-15, P = 4.3e-15
Identities = 80/305 (26%), Positives = 143/305 (46%)
Query: 11 CLTTLKGHNSYVSSLAL--AGKFLYTGSSDNEVRSWD-CNTFSSELDQEFLSNNNIVAVG 67
C T GH V L + G L++GSSD ++ WD C T+ Q+ L ++
Sbjct: 388 CKGTFVGHQGPVWCLCVYSIGDLLFSGSSDKTIKVWDTCTTYKC---QKTLEGHD----- 439
Query: 68 KGAVKSLVVLADKLFSAHQDHKIRVWKINNQEP-------DHQKYTRLATLPTLGDRAIK 120
G V +L + +KL+S D I VW I N + D+ T +++ L ++K
Sbjct: 440 -GIVLALCIQGNKLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNMLFSGSLK 498
Query: 121 LLMPKNHV--QIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLE 178
+ + V +++ K T ++H AL + LYS S+ +TIKIW + +C+
Sbjct: 499 AIKVWDIVGTELKLKKELTGLNHW----VRALVASQNYLYSGSY-QTIKIWDIRNLECVH 553
Query: 179 SITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALAL 238
+ ++ ++A+++ + G+ + I VW K+ V L H + ALA+
Sbjct: 554 -VLQTSGGSVYSIAVTNH-HIVCGTYENLIHVWDIE--TKEQ--VRTLTGHVGTVYALAV 607
Query: 239 --SCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADK 296
+ D + ++S + DRS+ VW + N++ L H S+ +AV + SG+ D
Sbjct: 608 ISTPDQTKVFSASYDRSLRVWSMD----NMICTQTLLRHQGSVTALAVSRGRLFSGAVDS 663
Query: 297 TIRIW 301
T+++W
Sbjct: 664 TVKVW 668
Score = 160 (61.4 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 57/190 (30%), Positives = 97/190 (51%)
Query: 137 TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRT-SDFKCLESITNAHDDAINAVALSD 195
T+V H V L + LL+S S D+TIK+W T + +KC +++ HD + A+ +
Sbjct: 391 TFVGHQGPVWCLCVYSIGDLLFSGSSDKTIKVWDTCTTYKCQKTL-EGHDGIVLALCIQG 449
Query: 196 DGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSII 255
+ +Y+GSAD I VW K V+ + H++ + L S ++L+SG+ ++I
Sbjct: 450 N-KLYSGSADCTIIVWDIQNLQK----VNTIRAHDNPVCTLVSS--HNMLFSGSL-KAIK 501
Query: 256 VWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLE 315
VW+ + + + L G + + + + SGS +TI+IW I RN C+ VL+
Sbjct: 502 VWDIVGTE--LKLKKELTGLNHWVRALVASQNYLYSGSY-QTIKIW-DI-RNLECVHVLQ 556
Query: 316 GHRGPVKCLA 325
G V +A
Sbjct: 557 TSGGSVYSIA 566
Score = 155 (59.6 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 67/262 (25%), Positives = 113/262 (43%)
Query: 9 HHCLTTLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGK 68
+ C TL+GH+ V +L + G LY+GS+D + WD L N +
Sbjct: 429 YKCQKTLEGHDGIVLALCIQGNKLYSGSADCTIIVWDIQN---------LQKVNTIRAHD 479
Query: 69 GAVKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLGDRAIKLLMPKNHV 128
V +LV + LFS I+VW I E +K L L L+ +N++
Sbjct: 480 NPVCTLVSSHNMLFSGSLK-AIKVWDIVGTELKLKK-----ELTGLNHWVRALVASQNYL 533
Query: 129 QIRRHKTCT-W-VHHVDAVSALALTKDETLLYSVS--------WDRTIKIWRTSDFKCLE 178
++T W + +++ V L + +V+ ++ I +W + +
Sbjct: 534 YSGSYQTIKIWDIRNLECVHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDIETKEQVR 593
Query: 179 SITNAHDDAINAVAL---SDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINA 235
++T H + A+A+ D V++ S D+ ++VW S N L RH + A
Sbjct: 594 TLTG-HVGTVYALAVISTPDQTKVFSASYDRSLRVW--SMDNM--ICTQTLLRHQGSVTA 648
Query: 236 LALSCDGSVLYSGACDRSIIVW 257
LA+S G L+SGA D ++ VW
Sbjct: 649 LAVS-RGR-LFSGAVDSTVKVW 668
Score = 130 (50.8 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 36/89 (40%), Positives = 43/89 (48%)
Query: 270 GALRGHTKSILCMAVVS--DLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAA 327
G GH + C+ V S DL+ SGS+DKTI++W Y C LEGH G V L
Sbjct: 390 GTFVGHQGPVWCLCVYSIGDLLFSGSSDKTIKVWDTCT-TYKCQKTLEGHDGIVLAL--- 445
Query: 328 IDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
C + Y SGS DC I VW I
Sbjct: 446 -----CIQGNKLY---SGSADCTIIVWDI 466
>ZFIN|ZDB-GENE-070112-2212 [details] [associations]
symbol:traf7 "TNF receptor-associated factor 7"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR008974 InterPro:IPR013323 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089 PROSITE:PS50294
SMART:SM00184 SMART:SM00320 Pfam:PF00097 Prosite:PS00518
ZFIN:ZDB-GENE-070112-2212 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 GeneTree:ENSGT00690000101849 CTD:84231
HOGENOM:HOG000220840 HOVERGEN:HBG055270 KO:K10646 OMA:ALCIQGN
OrthoDB:EOG4BRWK8 EMBL:BX572621 EMBL:CR450851 EMBL:BC129220
IPI:IPI00488353 RefSeq:NP_001073654.1 UniGene:Dr.124692
Ensembl:ENSDART00000084579 Ensembl:ENSDART00000132703 GeneID:563746
KEGG:dre:563746 InParanoid:A1L1U9 NextBio:20885047 Uniprot:A1L1U9
Length = 639
Score = 217 (81.4 bits), Expect = 5.2e-15, P = 5.2e-15
Identities = 81/305 (26%), Positives = 147/305 (48%)
Query: 11 CLTTLKGHNSYVSSLAL--AGKFLYTGSSDNEVRSWD-CNTFSSELDQEFLSNNNIVAVG 67
C T GH V L + G L++GSSD ++ WD C T+ Q+ L ++
Sbjct: 357 CKGTFVGHQGPVWCLCVYSTGDLLFSGSSDKSIKVWDTCTTYKC---QKTLEGHD----- 408
Query: 68 KGAVKSLVVLADKLFSAHQDHKIRVW------KINN-QEPDHQKYTRLATLPTLGDRAIK 120
G V +L + +KL+S D I VW K+N + D+ T +++ L ++K
Sbjct: 409 -GIVLALCIQGNKLYSGSADCTIIVWDIQTLQKVNTIRAHDNPVCTLVSSHNMLFSGSLK 467
Query: 121 LLMPKNHV--QIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLE 178
+ + V +++ K T ++H V AL +++ LYS S+ +TIKIW +C+
Sbjct: 468 AIKVWDIVGTELKLKKELTGLNHW--VRALVASQNH--LYSGSY-QTIKIWDIRSLECVH 522
Query: 179 SITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALAL 238
+ ++ ++A+++ + G+ + I VW +K+ V L H + ALA+
Sbjct: 523 -VLQTSGGSVYSIAVTNH-HIVCGTYENLIHVWDIE--SKEQ--VRTLTGHVGTVYALAV 576
Query: 239 --SCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADK 296
+ D + ++S + DRS+ VW + N++ L H S+ +AV + SG+ D
Sbjct: 577 ISTPDQTKVFSASYDRSLRVWSMD----NMICTQTLLRHQGSVTALAVSRGRLFSGAVDS 632
Query: 297 TIRIW 301
T+++W
Sbjct: 633 TVKVW 637
Score = 165 (63.1 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 69/262 (26%), Positives = 113/262 (43%)
Query: 9 HHCLTTLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGK 68
+ C TL+GH+ V +L + G LY+GS+D + WD T L N +
Sbjct: 398 YKCQKTLEGHDGIVLALCIQGNKLYSGSADCTIIVWDIQT---------LQKVNTIRAHD 448
Query: 69 GAVKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLGDRAIKLLMPKNHV 128
V +LV + LFS I+VW I E +K L L L+ +NH+
Sbjct: 449 NPVCTLVSSHNMLFSGSLK-AIKVWDIVGTELKLKK-----ELTGLNHWVRALVASQNHL 502
Query: 129 QIRRHKTCT-W-VHHVDAVSALALTKDETLLYSVS--------WDRTIKIWRTSDFKCLE 178
++T W + ++ V L + +V+ ++ I +W + +
Sbjct: 503 YSGSYQTIKIWDIRSLECVHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQVR 562
Query: 179 SITNAHDDAINAVAL---SDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINA 235
++T H + A+A+ D V++ S D+ ++VW S N L RH + A
Sbjct: 563 TLTG-HVGTVYALAVISTPDQTKVFSASYDRSLRVW--SMDNM--ICTQTLLRHQGSVTA 617
Query: 236 LALSCDGSVLYSGACDRSIIVW 257
LA+S G L+SGA D ++ VW
Sbjct: 618 LAVS-RGR-LFSGAVDSTVKVW 637
Score = 158 (60.7 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 55/185 (29%), Positives = 86/185 (46%)
Query: 174 FKCLESITNAHDDAINAVALSDDGDV-YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSG 232
FKC + H + + + GD+ ++GS+DK IKVW K LE H+ G
Sbjct: 355 FKCKGTFVG-HQGPVWCLCVYSTGDLLFSGSSDKSIKVWDTCTTYKCQK---TLEGHD-G 409
Query: 233 INALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSG 292
I LAL G+ LYSG+ D +IIVW+ + + V +R H + + +++ SG
Sbjct: 410 I-VLALCIQGNKLYSGSADCTIIVWDIQ----TLQKVNTIRAHDNPVCTLVSSHNMLFSG 464
Query: 293 SADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIK 352
S K I++W + L G V+ L A+ ++ S T + SL+C +
Sbjct: 465 SL-KAIKVWDIVGTELKLKKELTGLNHWVRALVASQNHLYSGSYQTIKIWDIRSLEC-VH 522
Query: 353 VWQIS 357
V Q S
Sbjct: 523 VLQTS 527
Score = 152 (58.6 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 55/190 (28%), Positives = 97/190 (51%)
Query: 137 TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRT-SDFKCLESITNAHDDAINAVALSD 195
T+V H V L + LL+S S D++IK+W T + +KC +++ HD + A+ +
Sbjct: 360 TFVGHQGPVWCLCVYSTGDLLFSGSSDKSIKVWDTCTTYKCQKTL-EGHDGIVLALCIQG 418
Query: 196 DGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSII 255
+ +Y+GSAD I VW K V+ + H++ + L S ++L+SG+ ++I
Sbjct: 419 N-KLYSGSADCTIIVWDIQTLQK----VNTIRAHDNPVCTLVSS--HNMLFSGSL-KAIK 470
Query: 256 VWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLE 315
VW+ + + + L G + + + + SGS +TI+IW I R+ C+ VL+
Sbjct: 471 VWDIVGTE--LKLKKELTGLNHWVRALVASQNHLYSGSY-QTIKIW-DI-RSLECVHVLQ 525
Query: 316 GHRGPVKCLA 325
G V +A
Sbjct: 526 TSGGSVYSIA 535
>FB|FBgn0023423 [details] [associations]
symbol:slmb "supernumerary limbs" species:7227 "Drosophila
melanogaster" [GO:0045879 "negative regulation of smoothened
signaling pathway" evidence=IMP] [GO:0030111 "regulation of Wnt
receptor signaling pathway" evidence=IMP;TAS] [GO:0008588 "release
of cytoplasmic sequestered NF-kappaB" evidence=IMP;TAS] [GO:0008589
"regulation of smoothened signaling pathway" evidence=TAS]
[GO:0000151 "ubiquitin ligase complex" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0030512
"negative regulation of transforming growth factor beta receptor
signaling pathway" evidence=NAS] [GO:0030178 "negative regulation
of Wnt receptor signaling pathway" evidence=IMP;NAS] [GO:0019005
"SCF ubiquitin ligase complex" evidence=NAS;TAS] [GO:0006508
"proteolysis" evidence=IMP] [GO:0045475 "locomotor rhythm"
evidence=IMP] [GO:0007623 "circadian rhythm" evidence=IMP;IPI]
[GO:0007611 "learning or memory" evidence=IMP] [GO:0008355
"olfactory learning" evidence=IMP] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0030708 "germarium-derived female
germ-line cyst encapsulation" evidence=IMP] [GO:0046843 "dorsal
appendage formation" evidence=IMP] [GO:0030720 "oocyte localization
involved in germarium-derived egg chamber formation" evidence=IMP]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0030727
"germarium-derived female germ-line cyst formation" evidence=IMP]
[GO:0045849 "negative regulation of nurse cell apoptotic process"
evidence=IMP] [GO:0030707 "ovarian follicle cell development"
evidence=IMP] [GO:0007293 "germarium-derived egg chamber formation"
evidence=IMP] [GO:0030713 "ovarian follicle cell stalk formation"
evidence=IMP] [GO:0007304 "chorion-containing eggshell formation"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0007298 "border follicle cell migration" evidence=IMP]
[GO:0046599 "regulation of centriole replication" evidence=IDA]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 SMART:SM01028 GO:GO:0007088
GO:GO:0008355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 GO:GO:0006508 SUPFAM:SSF81383 GO:GO:0007298
GO:GO:0045475 GO:GO:0019005 GO:GO:0004842 GO:GO:0030178
GO:GO:0046843 GO:GO:0030720 GO:GO:0030713 GO:GO:0030512
GO:GO:0030727 GO:GO:0030708 GO:GO:0008588 GO:GO:0045879
GO:GO:0046599 HSSP:Q9Y297 GO:GO:0060253 EMBL:AF032878
ProteinModelPortal:O44382 SMR:O44382 IntAct:O44382 STRING:O44382
PaxDb:O44382 PRIDE:O44382 FlyBase:FBgn0023423 HOGENOM:HOG000102803
InParanoid:O44382 OrthoDB:EOG4S7H55 ArrayExpress:O44382 Bgee:O44382
GO:GO:0045849 Uniprot:O44382
Length = 510
Score = 215 (80.7 bits), Expect = 5.6e-15, P = 5.6e-15
Identities = 67/212 (31%), Positives = 106/212 (50%)
Query: 146 SALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSAD 205
S L L D+ ++ S S D T+++W + + + ++ + H +A+ + ++ G + T S D
Sbjct: 252 SVLCLQYDDKVIISGSSDSTVRVWDVNTGEMVNTLIH-HCEAVLHLRFNN-GMMVTCSKD 309
Query: 206 KKIKVW-RRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDG 264
+ I VW SP + +L VL H + +N + D + S + DR+I VW +
Sbjct: 310 RSIAVWDMTSPS--EITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWSTSTCE- 364
Query: 265 NILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCL 324
V L GH + I C+ LV SGS+D +IR+W I+ CL VLEGH V+C+
Sbjct: 365 ---FVRTLNGHKRGIACLQYRDRLVVSGSSDNSIRLW-DIECG-ACLRVLEGHEELVRCI 419
Query: 325 AAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
DT +V SG+ D IKVW +
Sbjct: 420 RF----------DTKRIV-SGAYDGKIKVWDL 440
Score = 169 (64.5 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 48/177 (27%), Positives = 85/177 (48%)
Query: 150 LTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSADKKIK 209
L D+ + S D TIKIW +D +C++++ H ++ + DD + +GS+D ++
Sbjct: 216 LQYDDGKIVSGLRDNTIKIWDRTDLQCVKTLMG-HTGSVLCLQY-DDKVIISGSSDSTVR 273
Query: 210 VWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVV 269
VW + G +V+ L H + L L + ++ + + DRSI VW+ I +
Sbjct: 274 VWDVNTGE----MVNTLIHHCEAV--LHLRFNNGMMVTCSKDRSIAVWDMTSPS-EITLR 326
Query: 270 GALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTC--LAVLEGHRGPVKCL 324
L GH ++ + + S S D+TI++W TC + L GH+ + CL
Sbjct: 327 RVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWS----TSTCEFVRTLNGHKRGIACL 379
Score = 160 (61.4 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 76/292 (26%), Positives = 119/292 (40%)
Query: 29 GKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGK-GAVKSLVVLADKLFSAHQD 87
GK + +G DN ++ WD D + + +G G+V L + S D
Sbjct: 221 GKIV-SGLRDNTIKIWD------RTDLQCVKT----LMGHTGSVLCLQYDDKVIISGSSD 269
Query: 88 HKIRVWKINNQEPD-----------HQKYTRLATLPTLGDRAIKL--LMPKNHVQIRRHK 134
+RVW +N E H ++ + DR+I + + + + +RR
Sbjct: 270 STVRVWDVNTGEMVNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMTSPSEITLRR-- 327
Query: 135 TCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALS 194
V H AV+ + DE + S S DRTIK+W TS + + ++ N H I +
Sbjct: 328 --VLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWSTSTCEFVRTL-NGHKRGIACLQYR 382
Query: 195 DDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSI 254
D V +GS+D I++W G + + VLE H + + D + SGA D I
Sbjct: 383 DRL-VVSGSSDNSIRLWDIECG----ACLRVLEGHEELVRCIRF--DTKRIVSGAYDGKI 435
Query: 255 IVWE-----KEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIW 301
VW+ N L + L HT + + + S S D TI IW
Sbjct: 436 KVWDLVAALDPRAASNTLCLNTLVEHTGRVFRLQFDEFQIVSSSHDDTILIW 487
Score = 150 (57.9 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 63/263 (23%), Positives = 111/263 (42%)
Query: 8 DHHCLTTLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVG 67
D C+ TL GH V L K + +GSSD+ VR WD NT E+ + +
Sbjct: 239 DLQCVKTLMGHTGSVLCLQYDDKVIISGSSDSTVRVWDVNT--GEMVNTLIHHCE----- 291
Query: 68 KGAVKSLVVLADKLFSAHQDHKIRVWKINN-QEPDHQKYT---RLAT-LPTLGDRAIKLL 122
AV L + + +D I VW + + E ++ R A + ++ I
Sbjct: 292 --AVLHLRFNNGMMVTCSKDRSIAVWDMTSPSEITLRRVLVGHRAAVNVVDFDEKYIVSA 349
Query: 123 MPKNHVQIRRHKTCTWVHHVDAVS-ALA-LTKDETLLYSVSWDRTIKIWRTSDFKCLESI 180
+++ TC +V ++ +A L + L+ S S D +I++W CL +
Sbjct: 350 SGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNSIRLWDIECGACLR-V 408
Query: 181 TNAHDDAINAVALSDDGDVYTGSADKKIKVW----RRSPGNKKHSL-VDVLERHNSGINA 235
H++ + + D + +G+ D KIKVW P ++L ++ L H +
Sbjct: 409 LEGHEELVRCIRF-DTKRIVSGAYDGKIKVWDLVAALDPRAASNTLCLNTLVEHTGRV-- 465
Query: 236 LALSCDGSVLYSGACDRSIIVWE 258
L D + S + D +I++W+
Sbjct: 466 FRLQFDEFQIVSSSHDDTILIWD 488
Score = 118 (46.6 bits), Expect = 0.00049, P = 0.00049
Identities = 26/85 (30%), Positives = 47/85 (55%)
Query: 219 KHSL--VDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHT 276
+H L ++ ++ G+ L DG ++ SG D +I +W++ + + V L GHT
Sbjct: 197 RHMLRRINCRSENSKGVYCLQYD-DGKIV-SGLRDNTIKIWDRTD----LQCVKTLMGHT 250
Query: 277 KSILCMAVVSDLVCSGSADKTIRIW 301
S+LC+ ++ SGS+D T+R+W
Sbjct: 251 GSVLCLQYDDKVIISGSSDSTVRVW 275
>ZFIN|ZDB-GENE-050417-160 [details] [associations]
symbol:wdr38 "WD repeat domain 38" species:7955
"Danio rerio" [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-050417-160
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
HOGENOM:HOG000091642 CTD:401551 HOVERGEN:HBG106736
OrthoDB:EOG4ZW5BD EMBL:BC093164 IPI:IPI00570124
RefSeq:NP_001017672.1 UniGene:Dr.91594 ProteinModelPortal:Q567I2
STRING:Q567I2 GeneID:550366 KEGG:dre:550366 InParanoid:Q567I2
NextBio:20879618 Uniprot:Q567I2
Length = 216
Score = 194 (73.4 bits), Expect = 6.1e-15, P = 6.1e-15
Identities = 54/191 (28%), Positives = 88/191 (46%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H V+ A + D LL + + +W+TS K L S++ H + S DG ++
Sbjct: 21 HKAEVNCCAFSPDCQLLLTCCDAGKLYLWKTSTAKLLASVSG-HTGPVKCCVFSSDGRLF 79
Query: 201 -TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEK 259
+ S D ++ W S H+L H + ++ S DG L SG D ++W
Sbjct: 80 ASASHDCSVRTWCNSSLKCTHTLT----AHRRSVETVSFSPDGQWLLSGGWDNRALIWSI 135
Query: 260 EEDDGNILVVGALRGHTKSILCMAVVSDL--VCSGSADKTIRIWRGIDRNYTCLAVLEGH 317
+ G +L L+GH ++ SD V +GS D+ +R+W+ DR + VL+GH
Sbjct: 136 QS--GALLE--ELKGHNAAVQSSVFSSDSQSVATGSWDRAVRVWKLRDRQAEAV-VLQGH 190
Query: 318 RGPVKCLAAAI 328
G V CL ++
Sbjct: 191 LGNVACLCFSV 201
Score = 172 (65.6 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 42/152 (27%), Positives = 74/152 (48%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD-V 199
H V + D L S S D +++ W S KC ++T AH ++ V+ S DG +
Sbjct: 63 HTGPVKCCVFSSDGRLFASASHDCSVRTWCNSSLKCTHTLT-AHRRSVETVSFSPDGQWL 121
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEK 259
+G D + +W G +L++ L+ HN+ + + S D + +G+ DR++ VW+
Sbjct: 122 LSGGWDNRALIWSIQSG----ALLEELKGHNAAVQSSVFSSDSQSVATGSWDRAVRVWKL 177
Query: 260 EEDDGNILVVGALRGHTKSI--LCMAVVSDLV 289
+ +V L+GH ++ LC +V LV
Sbjct: 178 RDRQAEAVV---LQGHLGNVACLCFSVAGMLV 206
>UNIPROTKB|O76071 [details] [associations]
symbol:CIAO1 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1" species:9606 "Homo sapiens" [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0016226 "iron-sulfur
cluster assembly" evidence=IGI] [GO:0071817 "MMXD complex"
evidence=IDA] [GO:0097361 "CIA complex" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0008284 "positive regulation of cell
proliferation" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008284 eggNOG:COG2319
GO:GO:0006357 GO:GO:0016226 GO:GO:0071817 HOGENOM:HOG000208901
OMA:SWKCVCT CTD:9391 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:U63810 EMBL:EF011618 EMBL:AC004020 EMBL:CR456802
EMBL:AK223257 EMBL:BC001395 EMBL:BC032812 IPI:IPI00008791
RefSeq:NP_004795.1 UniGene:Hs.12109 PDB:3FM0 PDBsum:3FM0
ProteinModelPortal:O76071 SMR:O76071 IntAct:O76071
MINT:MINT-1416717 STRING:O76071 PhosphoSite:O76071 PaxDb:O76071
PeptideAtlas:O76071 PRIDE:O76071 DNASU:9391 Ensembl:ENST00000488633
GeneID:9391 KEGG:hsa:9391 UCSC:uc002svs.3 GeneCards:GC02P096931
HGNC:HGNC:14280 HPA:HPA017882 MIM:604333 neXtProt:NX_O76071
PharmGKB:PA162382269 InParanoid:O76071 PhylomeDB:O76071
ChiTaRS:CIAO1 EvolutionaryTrace:O76071 GenomeRNAi:9391
NextBio:35187 Bgee:O76071 CleanEx:HS_CIAO1 Genevestigator:O76071
GermOnline:ENSG00000144021 Uniprot:O76071
Length = 339
Score = 209 (78.6 bits), Expect = 6.8e-15, P = 6.8e-15
Identities = 63/218 (28%), Positives = 103/218 (47%)
Query: 148 LALTKDETLLYSVSWDRTIKIWRTS--DFKCLESITNAHDDAINAVALSDDGDVYTGSA- 204
LA TLL S DR I+IW T + C ++ H + VA S G+ Y SA
Sbjct: 22 LAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGN-YLASAS 80
Query: 205 -DKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDD 263
D +W+++ + V LE H + + ++A + G++L + + D+S+ VWE +E+D
Sbjct: 81 FDATTCIWKKNQDD--FECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEED 138
Query: 264 GNILVVGALRGHTKSI--LCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPV 321
V L HT+ + + +L+ S S D T++++R + ++ C A LEGH V
Sbjct: 139 -EYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTV 197
Query: 322 KCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQISFP 359
LA D S CS D +++W+ P
Sbjct: 198 WSLAF-------DPSGQRLASCSD--DRTVRIWRQYLP 226
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 212 (79.7 bits), Expect = 7.1e-15, P = 7.1e-15
Identities = 81/306 (26%), Positives = 131/306 (42%)
Query: 12 LTTLKGHNSYVSSLALAGKF---LYTGSSDNEVRSWDCNTFSSELDQEFLSNN-NIVAVG 67
L TL+GH + V ++A + + TGS D + W T + F + IV +
Sbjct: 127 LNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVET--GKCYHTFRGHTAEIVCLS 184
Query: 68 KGAVKSLVVLADKLFSAHQDHKIRVWKINNQEP-----DHQKYTRLATLPTLGDRAIKLL 122
+LV + D ++W I N E H + T GDR I
Sbjct: 185 FNPQSTLVA------TGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGS 238
Query: 123 MPKNHV---QIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLES 179
V K + H +S+ + D +L+ + S D+T K+W ++ KC+ +
Sbjct: 239 FDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVAT 298
Query: 180 ITNAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALAL 238
+T HDD I G + T SAD +++ S +K + LE H I+ ++
Sbjct: 299 LTG-HDDEILDSCFDYTGKLIATASADGTARIF--SAATRK--CIAKLEGHEGEISKISF 353
Query: 239 SCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAV--VSDLVCSGSADK 296
+ G+ L +G+ D++ +W+ + G L V L GHT I A ++V +GS D
Sbjct: 354 NPQGNHLLTGSSDKTARIWDAQT--GQCLQV--LEGHTDEIFSCAFNYKGNIVITGSKDN 409
Query: 297 TIRIWR 302
T RIWR
Sbjct: 410 TCRIWR 415
Score = 196 (74.1 bits), Expect = 5.4e-13, P = 5.4e-13
Identities = 55/188 (29%), Positives = 91/188 (48%)
Query: 137 TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDD 196
T+ H + L+ TL+ + S D T K+W + + + ++ H I +++ +
Sbjct: 172 TFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTL-RGHSAEIISLSFNTS 230
Query: 197 GD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSII 255
GD + TGS D + VW G K V++L H + I++ + + D S++ +G+ D++
Sbjct: 231 GDRIITGSFDHTVVVWDADTGRK----VNILIGHCAEISSASFNWDCSLILTGSMDKTCK 286
Query: 256 VWEKEEDDGNILVVGALRGHTKSIL--CMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAV 313
+W D N V L GH IL C L+ + SAD T RI+ R C+A
Sbjct: 287 LW----DATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRK--CIAK 340
Query: 314 LEGHRGPV 321
LEGH G +
Sbjct: 341 LEGHEGEI 348
Score = 182 (69.1 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 57/218 (26%), Positives = 108/218 (49%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDD-GD- 198
H+ ++ +AL K + + S+DRT K+W T+ + L ++ H + + A+A ++ GD
Sbjct: 91 HILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTL-EGHRNVVYAIAFNNPYGDK 149
Query: 199 VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWE 258
+ TGS DK K+W G H+ H + I L+ + +++ +G+ D + +W+
Sbjct: 150 IATGSFDKTCKLWSVETGKCYHTF----RGHTAEIVCLSFNPQSTLVATGSMDTTAKLWD 205
Query: 259 KEEDDGNILVVGALRGHTKSILCMA--VVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEG 316
+ + V LRGH+ I+ ++ D + +GS D T+ +W D + +L G
Sbjct: 206 IQNGEE----VYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDA-DTGRK-VNILIG 259
Query: 317 HRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVW 354
H + +A+ + D C L+ +GS+D K+W
Sbjct: 260 HCAEIS--SASFNWD-CS------LILTGSMDKTCKLW 288
Score = 131 (51.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 39/145 (26%), Positives = 65/145 (44%)
Query: 217 NKKHS--LVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRG 274
N H+ L VL+ H + +AL+ GS +G+ DR+ +W+ + + L G
Sbjct: 77 NSNHTFYLFKVLKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEE----LNTLEG 132
Query: 275 HTKSILCMAV---VSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDND 331
H + +A D + +GS DKT ++W ++ C GH + CL+
Sbjct: 133 HRNVVYAIAFNNPYGDKIATGSFDKTCKLW-SVETG-KCYHTFRGHTAEIVCLSF----- 185
Query: 332 RCDSSDTSYLVCSGSLDCDIKVWQI 356
+ S LV +GS+D K+W I
Sbjct: 186 ----NPQSTLVATGSMDTTAKLWDI 206
>UNIPROTKB|F1NII4 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 PRINTS:PR00319 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:AADN02025808 EMBL:AADN02025807
IPI:IPI00592422 ProteinModelPortal:F1NII4
Ensembl:ENSGALT00000007475 Uniprot:F1NII4
Length = 498
Score = 213 (80.0 bits), Expect = 9.1e-15, P = 9.1e-15
Identities = 102/364 (28%), Positives = 158/364 (43%)
Query: 11 CLTTLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGK 68
C ++L+GH V S+A + GK+L +GS D VR WD +T E Q F + + +
Sbjct: 119 CTSSLEGHTEAVISVAFSPTGKYLASGSGDTTVRFWDLST---ETPQ-FTAKGH-----R 169
Query: 69 GAVKSLVVLAD--KLFSAHQDHKIRVW------KINNQEPDHQKY-TRLATLPT-LGDRA 118
V S+ D KL S ++ +I +W +I H K+ T L P +
Sbjct: 170 HWVLSIAWSPDGKKLASGCKNSQIFLWDPATGNQIGRVLTGHSKWITCLCWEPLHINPEC 229
Query: 119 IKLLMPKNHVQIRRHKT----CTWV--HHVDAVSALALTKDETLLYSVSWDRTIKIWRTS 172
L IR T C + H +V+ + D LLYS S DRTIK+WR+
Sbjct: 230 RYLASASKDGSIRIWDTLMGRCDKILTGHTQSVTCVKWGGDG-LLYSSSQDRTIKVWRSQ 288
Query: 173 DFKCLESITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSG 232
D ++ H +N +ALS D + TG+ + +P + SL ++ ++
Sbjct: 289 DGILCRTL-QGHAHWVNTMALSTDYVLRTGAFEPAEATI--NPQDMSGSLAELKDKAQQR 345
Query: 233 INALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVC 290
+ + L SG+ D ++ +W ED + + GH I + D ++
Sbjct: 346 YDKVR-GQGPERLVSGSDDFTLFLWRPAEDKKPL---ERMTGHQALINQVLFSPDTRIIA 401
Query: 291 SGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCD 350
S S DK+I++W G Y L L GH V +A + D S L+ SGS D
Sbjct: 402 SASFDKSIKLWEGRTGKY--LTSLRGHVSAVYQIAWSAD---------SRLLVSGSSDST 450
Query: 351 IKVW 354
+KVW
Sbjct: 451 LKVW 454
Score = 165 (63.1 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 57/199 (28%), Positives = 91/199 (45%)
Query: 157 LYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPG 216
L S S D +I+IW T +C + I H ++ V DG +Y+ S D+ IKVWR G
Sbjct: 232 LASASKDGSIRIWDTLMGRC-DKILTGHTQSVTCVKWGGDGLLYSSSQDRTIKVWRSQDG 290
Query: 217 NKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHT 276
L L+ H +N +ALS D VL +GA + + ++ G++ + +
Sbjct: 291 ----ILCRTLQGHAHWVNTMALSTD-YVLRTGAFEPAEATINPQDMSGSLAELKD-KAQQ 344
Query: 277 KSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSS 336
+ + + SGS D T+ +WR + L + GH+ A+ N S
Sbjct: 345 RYDKVRGQGPERLVSGSDDFTLFLWRPAEDKKP-LERMTGHQ--------ALINQVLFSP 395
Query: 337 DTSYLVCSGSLDCDIKVWQ 355
DT ++ S S D IK+W+
Sbjct: 396 DTR-IIASASFDKSIKLWE 413
Score = 162 (62.1 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 53/150 (35%), Positives = 70/150 (46%)
Query: 157 LYSVSWDRTIKIWRTS-DFKCLESITNAHDDAINAVALSDDGDVY-TGSADKKIKVWRRS 214
L S S D T+ +WR + D K LE +T H IN V S D + + S DK IK+W
Sbjct: 357 LVSGSDDFTLFLWRPAEDKKPLERMTG-HQALINQVLFSPDTRIIASASFDKSIKLWEGR 415
Query: 215 PGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRG 274
G SL H S + +A S D +L SG+ D ++ VW+ E L + L G
Sbjct: 416 TGKYLTSL----RGHVSAVYQIAWSADSRLLVSGSSDSTLKVWDAETKK---LAID-LPG 467
Query: 275 HTKSILCMAVVSD--LVCSGSADKTIRIWR 302
H + D V SG DK +RIWR
Sbjct: 468 HADEVFATDWSPDGQRVASGGKDKCLRIWR 497
Score = 133 (51.9 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 62/264 (23%), Positives = 105/264 (39%)
Query: 11 CLTTLKGHNSYVSSLALAGK-FLYTGSSDNEVRSW---D---CNTFSSE---LDQEFLSN 60
C L GH V+ + G LY+ S D ++ W D C T ++ LS
Sbjct: 251 CDKILTGHTQSVTCVKWGGDGLLYSSSQDRTIKVWRSQDGILCRTLQGHAHWVNTMALST 310
Query: 61 NNIVAVGKGAVKSLVV----LADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLGD 116
+ ++ G + ++ L + R K+ Q P+ RL + D
Sbjct: 311 DYVLRTGAFEPAEATINPQDMSGSLAELKDKAQQRYDKVRGQGPE-----RLVS--GSDD 363
Query: 117 RAIKLLMPKNHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKC 176
+ L P + T H ++ + + D ++ S S+D++IK+W K
Sbjct: 364 FTLFLWRPAEDKKPLERMT----GHQALINQVLFSPDTRIIASASFDKSIKLWEGRTGKY 419
Query: 177 LESITNAHDDAINAVALSDDGDVY-TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINA 235
L S+ H A+ +A S D + +GS+D +KVW K +D L H + A
Sbjct: 420 LTSL-RGHVSAVYQIAWSADSRLLVSGSSDSTLKVW---DAETKKLAID-LPGHADEVFA 474
Query: 236 LALSCDGSVLYSGACDRSIIVWEK 259
S DG + SG D+ + +W +
Sbjct: 475 TDWSPDGQRVASGGKDKCLRIWRR 498
>UNIPROTKB|Q5EA56 [details] [associations]
symbol:TRAF7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043410 "positive regulation of MAPK cascade"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0000185 "activation of MAPKKK activity" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR008974 InterPro:IPR013323
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50145 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
Pfam:PF00097 Prosite:PS00518 GO:GO:0043231 GO:GO:0005886
GO:GO:0006915 GO:GO:0042981 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043410
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
GeneTree:ENSGT00690000101849 GO:GO:0000185 CTD:84231
HOGENOM:HOG000220840 HOVERGEN:HBG055270 KO:K10646 OMA:ALCIQGN
OrthoDB:EOG4BRWK8 EMBL:DAAA02057310 EMBL:DAAA02057311 EMBL:BT020713
IPI:IPI00696466 RefSeq:NP_001019692.1 UniGene:Bt.2084 STRING:Q5EA56
Ensembl:ENSBTAT00000025393 GeneID:511692 KEGG:bta:511692
InParanoid:Q5EA56 NextBio:20870056 Uniprot:Q5EA56
Length = 669
Score = 215 (80.7 bits), Expect = 9.6e-15, P = 9.6e-15
Identities = 82/305 (26%), Positives = 143/305 (46%)
Query: 11 CLTTLKGHNSYVSSLAL--AGKFLYTGSSDNEVRSWD-CNTFSSELDQEFLSNNNIVAVG 67
C T GH V L + G L++GSSD ++ WD C T+ Q+ L ++
Sbjct: 387 CKGTFVGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKC---QKTLEGHD----- 438
Query: 68 KGAVKSLVVLADKLFSAHQDHKIRVWKINNQEP-------DHQKYTRLATLPTLGDRAIK 120
G V +L + KL+S D I VW I N + D+ T +++ L ++K
Sbjct: 439 -GIVLALCIQGCKLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNMLFSGSLK 497
Query: 121 LLMPKNHV--QIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLE 178
+ + V +++ K T ++H V AL +T LYS S+ +TIKIW C+
Sbjct: 498 AIKVWDIVGTELKLKKELTGLNHW--VRALVAA--QTYLYSGSY-QTIKIWDIRTLDCIH 552
Query: 179 SITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALAL 238
+ ++ ++A+++ + G+ + I VW +K+ V L H + ALA+
Sbjct: 553 -VLQTSGGSVYSIAVTNH-HIVCGTYENLIHVWDIE--SKEQ--VRTLTGHVGTVYALAV 606
Query: 239 --SCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADK 296
+ D + ++S + DRS+ VW + N++ L H S+ +AV + SG+ D
Sbjct: 607 ISTPDQTKVFSASYDRSLRVWSMD----NMICTQTLLRHQGSVTALAVSRGRLFSGAVDS 662
Query: 297 TIRIW 301
T+++W
Sbjct: 663 TVKVW 667
Score = 159 (61.0 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 58/185 (31%), Positives = 84/185 (45%)
Query: 174 FKCLESITNAHDDAINAVALSDDGDV-YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSG 232
FKC + H + + + GD+ ++GS+DK IKVW K LE H+ G
Sbjct: 385 FKCKGTFVG-HQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKCQK---TLEGHD-G 439
Query: 233 INALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSG 292
I LAL G LYSG+ D +IIVW+ + N+ V +R H + + +++ SG
Sbjct: 440 I-VLALCIQGCKLYSGSADCTIIVWDIQ----NLQKVNTIRAHDNPVCTLVSSHNMLFSG 494
Query: 293 SADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIK 352
S K I++W + L G V+ L AA S T + +LDC I
Sbjct: 495 SL-KAIKVWDIVGTELKLKKELTGLNHWVRALVAAQTYLYSGSYQTIKIWDIRTLDC-IH 552
Query: 353 VWQIS 357
V Q S
Sbjct: 553 VLQTS 557
Score = 151 (58.2 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 56/190 (29%), Positives = 94/190 (49%)
Query: 137 TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRT-SDFKCLESITNAHDDAINAVALSD 195
T+V H V L + LL+S S D+TIK+W T + +KC +++ HD + A+ +
Sbjct: 390 TFVGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKCQKTL-EGHDGIVLALCIQG 448
Query: 196 DGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSII 255
+Y+GSAD I VW K V+ + H++ + L S ++L+SG+ ++I
Sbjct: 449 C-KLYSGSADCTIIVWDIQNLQK----VNTIRAHDNPVCTLVSS--HNMLFSGSL-KAIK 500
Query: 256 VWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLE 315
VW+ + + + L G + + + SGS +TI+IW I R C+ VL+
Sbjct: 501 VWDIVGTE--LKLKKELTGLNHWVRALVAAQTYLYSGSY-QTIKIW-DI-RTLDCIHVLQ 555
Query: 316 GHRGPVKCLA 325
G V +A
Sbjct: 556 TSGGSVYSIA 565
Score = 148 (57.2 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 67/257 (26%), Positives = 107/257 (41%)
Query: 9 HHCLTTLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGK 68
+ C TL+GH+ V +L + G LY+GS+D + WD L N +
Sbjct: 428 YKCQKTLEGHDGIVLALCIQGCKLYSGSADCTIIVWDIQN---------LQKVNTIRAHD 478
Query: 69 GAVKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQK-YTRLATLPTLGDRAIKLLMPKNH 127
V +LV + LFS I+VW I E +K T L A L ++
Sbjct: 479 NPVCTLVSSHNMLFSGSLK-AIKVWDIVGTELKLKKELTGLNHWVRALVAAQTYLYSGSY 537
Query: 128 VQIR----RHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA 183
I+ R C V S ++ + +++ I +W + + ++T
Sbjct: 538 QTIKIWDIRTLDCIHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQVRTLTG- 596
Query: 184 HDDAINAVAL---SDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSC 240
H + A+A+ D V++ S D+ ++VW S N L RH + ALA+S
Sbjct: 597 HVGTVYALAVISTPDQTKVFSASYDRSLRVW--SMDNM--ICTQTLLRHQGSVTALAVS- 651
Query: 241 DGSVLYSGACDRSIIVW 257
G L+SGA D ++ VW
Sbjct: 652 RGR-LFSGAVDSTVKVW 667
>UNIPROTKB|B5X212 [details] [associations]
symbol:ciao1b "Probable cytosolic iron-sulfur protein
assembly protein ciao1-B" species:8030 "Salmo salar" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0097361 EMBL:BT045081
ProteinModelPortal:B5X212 Uniprot:B5X212
Length = 333
Score = 207 (77.9 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 60/207 (28%), Positives = 100/207 (48%)
Query: 155 TLLYSVSWDRTIKIW-RTSD-FKCLESITNAHDDAINAVALSDDGDVYTGSA--DKKIKV 210
TLL S DRTI+IW R D ++C + + H + VA S G+ Y SA D +
Sbjct: 29 TLLASCGGDRTIRIWGREGDSWECKTVLQDGHQRTVRKVAWSPCGN-YLASASFDATTCI 87
Query: 211 WRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVG 270
W++ N + VLE H + + +A + G++L + + D+S+ +WE +E++ V
Sbjct: 88 WKKK--NDDFECLTVLEGHENEVKCVAWAPSGNLLATCSRDKSVWIWEVDEEN-EYECVS 144
Query: 271 ALRGHTKSI--LCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAI 328
+ HT+ + + +L+ S S D + +++ D ++ C A LEGH V L
Sbjct: 145 VVNSHTQDVKHVVWHPTQELLASCSYDNNVCVYKEEDDDWECRATLEGHTSTVWGLTF-- 202
Query: 329 DNDRCDSSDTSYLVCSGSLDCDIKVWQ 355
D S CS DC +K+W+
Sbjct: 203 -----DPSGQRLASCSD--DCTVKIWK 222
Score = 181 (68.8 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 68/252 (26%), Positives = 110/252 (43%)
Query: 82 FSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLGDRAIKLLMPKNHVQIRRHKTCTWVHH 141
F+AH D R W + P K T LA+ GDR I++ + KT H
Sbjct: 11 FNAHPDS--RCWYVA-WNP---KGTLLASCG--GDRTIRIWGREGDSW--ECKTVLQDGH 60
Query: 142 VDAVSALALTKDETLLYSVSWDRTIKIWR--TSDFKCLESITNAHDDAINAVALSDDGDV 199
V +A + L S S+D T IW+ DF+CL ++ H++ + VA + G++
Sbjct: 61 QRTVRKVAWSPCGNYLASASFDATTCIWKKKNDDFECL-TVLEGHENEVKCVAWAPSGNL 119
Query: 200 Y-TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWE 258
T S DK + +W N+ + V V+ H + + +L S + D ++ V++
Sbjct: 120 LATCSRDKSVWIWEVDEENE-YECVSVVNSHTQDVKHVVWHPTQELLASCSYDNNVCVYK 178
Query: 259 KEEDDGNILVVGALRGHTKSI--LCMAVVSDLVCSGSADKTIRIWR---------GIDRN 307
+E+DD L GHT ++ L + S S D T++IW+ G D
Sbjct: 179 EEDDDWECRAT--LEGHTSTVWGLTFDPSGQRLASCSDDCTVKIWKECQPEGGQEGTDAA 236
Query: 308 YTCLAVLEGHRG 319
+ C+ L G G
Sbjct: 237 WKCVCTLSGFHG 248
Score = 156 (60.0 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 43/146 (29%), Positives = 71/146 (48%)
Query: 182 NAHDDA-INAVALSDDGDVYTG-SADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALS 239
NAH D+ VA + G + D+ I++W R G+ + + H + +A S
Sbjct: 12 NAHPDSRCWYVAWNPKGTLLASCGGDRTIRIWGRE-GDSWECKTVLQDGHQRTVRKVAWS 70
Query: 240 CDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVV--SDLVCSGSADKT 297
G+ L S + D + +W+K+ DD L V L GH + C+A +L+ + S DK+
Sbjct: 71 PCGNYLASASFDATTCIWKKKNDDFECLTV--LEGHENEVKCVAWAPSGNLLATCSRDKS 128
Query: 298 IRIWRGIDRN-YTCLAVLEGHRGPVK 322
+ IW + N Y C++V+ H VK
Sbjct: 129 VWIWEVDEENEYECVSVVNSHTQDVK 154
Score = 125 (49.1 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 30/88 (34%), Positives = 47/88 (53%)
Query: 242 GSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSI--LCMAVVSDLVCSGSADKTIR 299
G++L S DR+I +W +E D V GH +++ + + + + S S D T
Sbjct: 28 GTLLASCGGDRTIRIWGREGDSWECKTV-LQDGHQRTVRKVAWSPCGNYLASASFDATTC 86
Query: 300 IWRGIDRNYTCLAVLEGHRGPVKCLAAA 327
IW+ + ++ CL VLEGH VKC+A A
Sbjct: 87 IWKKKNDDFECLTVLEGHENEVKCVAWA 114
>CGD|CAL0000293 [details] [associations]
symbol:UTP13 species:5476 "Candida albicans" [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0034388
"Pwp2p-containing subcomplex of 90S preribosome" evidence=IEA]
[GO:0030515 "snoRNA binding" evidence=IEA] [GO:0000472
"endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA
from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480 "endonucleolytic
cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR013934 InterPro:IPR015943
Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0000293 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 EMBL:AACQ01000021 EMBL:AACQ01000022 KO:K14555
RefSeq:XP_720576.1 RefSeq:XP_720704.1 ProteinModelPortal:Q5AGB1
STRING:Q5AGB1 GeneID:3637636 GeneID:3637718 KEGG:cal:CaO19.11744
KEGG:cal:CaO19.4268 Uniprot:Q5AGB1
Length = 799
Score = 186 (70.5 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 55/195 (28%), Positives = 95/195 (48%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWR-TSDFKCLESITN--AHDDAINAVALSDDG 197
H D ++A+ ++ D + + S D ++WR + + E H AI A++LS
Sbjct: 380 HTDILNAVDVSTDGKWIATASKDNEARLWRWNGELQDFEPFARFQGHAGAITAISLSKSQ 439
Query: 198 D----VYTGSADKKIKVWRRSPGNKKHSLVDVLE----RHNSGINALALSCDGSVLYSGA 249
+ + TGS D IK W+ P N +S+V E H+ IN++ +S + + +
Sbjct: 440 NEPKFLVTGSTDLTIKKWK-IP-NTPNSIVKTSEYTRRAHDKDINSIDVSPNDEYFATAS 497
Query: 250 CDRSIIVWEKEEDDGNILVVGALRGHTKSI--LCMAVVSDLVCSGSADKTIRIWRGIDRN 307
D+ VW+ D G +G L+GH + + + L+ +GS DKTI++W +D
Sbjct: 498 YDKLGKVWQT--DSGE--TIGVLKGHKRGLWDINFYKFDKLIVTGSGDKTIKVWSLLD-- 551
Query: 308 YTCLAVLEGHRGPVK 322
++C LEGH V+
Sbjct: 552 FSCKKTLEGHTNSVQ 566
Score = 126 (49.4 bits), Expect = 0.00012, P = 0.00012
Identities = 57/272 (20%), Positives = 106/272 (38%)
Query: 12 LTTLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKG 69
L +GH ++++ ++ GK++ T S DNE R W N + + + A+
Sbjct: 374 LRVYEGHTDILNAVDVSTDGKWIATASKDNEARLWRWNGELQDFEPFARFQGHAGAITAI 433
Query: 70 AVKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQK---YTRLATLPTLGDRAIKLLMPKN 126
++ L + D I+ WKI N K YTR A + +I +
Sbjct: 434 SLSKSQNEPKFLVTGSTDLTIKKWKIPNTPNSIVKTSEYTRRAHDKDIN--SIDVSPNDE 491
Query: 127 HVQIRRHKTCTWVHHVDAVSALALTKD-------------ETLLYSVSWDRTIKIWRTSD 173
+ + V D+ + + K + L+ + S D+TIK+W D
Sbjct: 492 YFATASYDKLGKVWQTDSGETIGVLKGHKRGLWDINFYKFDKLIVTGSGDKTIKVWSLLD 551
Query: 174 FKCLESITNAHDDAINAVAL--SDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNS 231
F C +++ H +++ V + + + AD IK+W G ++ L+ H+
Sbjct: 552 FSCKKTL-EGHTNSVQRVKFFNREHPQLLSCGADGLIKLWDYKQGE----IIKSLDNHDQ 606
Query: 232 GINALALSCDGSVLYSGACDRSIIVWEKEEDD 263
I A+ L DG + D + W ++
Sbjct: 607 RIWAMDLKNDGEYFTTADADGKLSFWTDNTEE 638
Score = 123 (48.4 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 52/191 (27%), Positives = 86/191 (45%)
Query: 175 KCLE-SITNAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSG 232
K LE + H D +NAV +S DG + T S D + ++WR + + + H
Sbjct: 370 KPLELRVYEGHTDILNAVDVSTDGKWIATASKDNEARLWRWNGELQDFEPFARFQGHAGA 429
Query: 233 INALALSC---DGSVLYSGACDRSIIVWEKEEDDGNILVVGAL--RGHTKSILCMAVV-- 285
I A++LS + L +G+ D +I W+ +I+ R H K I + V
Sbjct: 430 ITAISLSKSQNEPKFLVTGSTDLTIKKWKIPNTPNSIVKTSEYTRRAHDKDINSIDVSPN 489
Query: 286 SDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSG 345
+ + S DK ++W+ D T + VL+GH+ + I+ + D L+ +G
Sbjct: 490 DEYFATASYDKLGKVWQ-TDSGET-IGVLKGHKRGLW----DINFYKFDK-----LIVTG 538
Query: 346 SLDCDIKVWQI 356
S D IKVW +
Sbjct: 539 SGDKTIKVWSL 549
Score = 75 (31.5 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 24/96 (25%), Positives = 41/96 (42%)
Query: 6 VVDHHCLTTLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNI 63
+V C+ TLK HN+ V + G +G DN V ++ F + F N I
Sbjct: 176 LVKRRCIHTLKDHNTAVRGVGFDQDGDLFISGGRDNVVIIYNTKNFKTI--NTFPINEQI 233
Query: 64 VAVGKGAVKSLVVLADKLFSAHQDHKIRVWKINNQE 99
A G SL+ ++ ++ +++W I + E
Sbjct: 234 EAAG---FVSLIDDRQYFYTGGSENVLKIWDIKSGE 266
Score = 46 (21.3 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 14 TLKGHNSYVSSLALAGKF------LYTGSSDNEVRSWD 45
+LKGH + + SL G+ L +G + V+ WD
Sbjct: 138 SLKGHGTTICSLTFHGELNSQDWRLASGDTMGTVKIWD 175
Score = 42 (19.8 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 8/25 (32%), Positives = 11/25 (44%)
Query: 21 YVSSLALAGKFLYTGSSDNEVRSWD 45
Y+SS+ G SD + WD
Sbjct: 105 YISSVDSTSSLFAFGGSDGVITVWD 129
>UNIPROTKB|Q5AGB1 [details] [associations]
symbol:CaO19.11744 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0032040 "small-subunit
processome" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0000293
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364 GO:GO:0032040
EMBL:AACQ01000021 EMBL:AACQ01000022 KO:K14555 RefSeq:XP_720576.1
RefSeq:XP_720704.1 ProteinModelPortal:Q5AGB1 STRING:Q5AGB1
GeneID:3637636 GeneID:3637718 KEGG:cal:CaO19.11744
KEGG:cal:CaO19.4268 Uniprot:Q5AGB1
Length = 799
Score = 186 (70.5 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 55/195 (28%), Positives = 95/195 (48%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWR-TSDFKCLESITN--AHDDAINAVALSDDG 197
H D ++A+ ++ D + + S D ++WR + + E H AI A++LS
Sbjct: 380 HTDILNAVDVSTDGKWIATASKDNEARLWRWNGELQDFEPFARFQGHAGAITAISLSKSQ 439
Query: 198 D----VYTGSADKKIKVWRRSPGNKKHSLVDVLE----RHNSGINALALSCDGSVLYSGA 249
+ + TGS D IK W+ P N +S+V E H+ IN++ +S + + +
Sbjct: 440 NEPKFLVTGSTDLTIKKWK-IP-NTPNSIVKTSEYTRRAHDKDINSIDVSPNDEYFATAS 497
Query: 250 CDRSIIVWEKEEDDGNILVVGALRGHTKSI--LCMAVVSDLVCSGSADKTIRIWRGIDRN 307
D+ VW+ D G +G L+GH + + + L+ +GS DKTI++W +D
Sbjct: 498 YDKLGKVWQT--DSGE--TIGVLKGHKRGLWDINFYKFDKLIVTGSGDKTIKVWSLLD-- 551
Query: 308 YTCLAVLEGHRGPVK 322
++C LEGH V+
Sbjct: 552 FSCKKTLEGHTNSVQ 566
Score = 126 (49.4 bits), Expect = 0.00012, P = 0.00012
Identities = 57/272 (20%), Positives = 106/272 (38%)
Query: 12 LTTLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKG 69
L +GH ++++ ++ GK++ T S DNE R W N + + + A+
Sbjct: 374 LRVYEGHTDILNAVDVSTDGKWIATASKDNEARLWRWNGELQDFEPFARFQGHAGAITAI 433
Query: 70 AVKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQK---YTRLATLPTLGDRAIKLLMPKN 126
++ L + D I+ WKI N K YTR A + +I +
Sbjct: 434 SLSKSQNEPKFLVTGSTDLTIKKWKIPNTPNSIVKTSEYTRRAHDKDIN--SIDVSPNDE 491
Query: 127 HVQIRRHKTCTWVHHVDAVSALALTKD-------------ETLLYSVSWDRTIKIWRTSD 173
+ + V D+ + + K + L+ + S D+TIK+W D
Sbjct: 492 YFATASYDKLGKVWQTDSGETIGVLKGHKRGLWDINFYKFDKLIVTGSGDKTIKVWSLLD 551
Query: 174 FKCLESITNAHDDAINAVAL--SDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNS 231
F C +++ H +++ V + + + AD IK+W G ++ L+ H+
Sbjct: 552 FSCKKTL-EGHTNSVQRVKFFNREHPQLLSCGADGLIKLWDYKQGE----IIKSLDNHDQ 606
Query: 232 GINALALSCDGSVLYSGACDRSIIVWEKEEDD 263
I A+ L DG + D + W ++
Sbjct: 607 RIWAMDLKNDGEYFTTADADGKLSFWTDNTEE 638
Score = 123 (48.4 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 52/191 (27%), Positives = 86/191 (45%)
Query: 175 KCLE-SITNAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSG 232
K LE + H D +NAV +S DG + T S D + ++WR + + + H
Sbjct: 370 KPLELRVYEGHTDILNAVDVSTDGKWIATASKDNEARLWRWNGELQDFEPFARFQGHAGA 429
Query: 233 INALALSC---DGSVLYSGACDRSIIVWEKEEDDGNILVVGAL--RGHTKSILCMAVV-- 285
I A++LS + L +G+ D +I W+ +I+ R H K I + V
Sbjct: 430 ITAISLSKSQNEPKFLVTGSTDLTIKKWKIPNTPNSIVKTSEYTRRAHDKDINSIDVSPN 489
Query: 286 SDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSG 345
+ + S DK ++W+ D T + VL+GH+ + I+ + D L+ +G
Sbjct: 490 DEYFATASYDKLGKVWQ-TDSGET-IGVLKGHKRGLW----DINFYKFDK-----LIVTG 538
Query: 346 SLDCDIKVWQI 356
S D IKVW +
Sbjct: 539 SGDKTIKVWSL 549
Score = 75 (31.5 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 24/96 (25%), Positives = 41/96 (42%)
Query: 6 VVDHHCLTTLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNI 63
+V C+ TLK HN+ V + G +G DN V ++ F + F N I
Sbjct: 176 LVKRRCIHTLKDHNTAVRGVGFDQDGDLFISGGRDNVVIIYNTKNFKTI--NTFPINEQI 233
Query: 64 VAVGKGAVKSLVVLADKLFSAHQDHKIRVWKINNQE 99
A G SL+ ++ ++ +++W I + E
Sbjct: 234 EAAG---FVSLIDDRQYFYTGGSENVLKIWDIKSGE 266
Score = 46 (21.3 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 14 TLKGHNSYVSSLALAGKF------LYTGSSDNEVRSWD 45
+LKGH + + SL G+ L +G + V+ WD
Sbjct: 138 SLKGHGTTICSLTFHGELNSQDWRLASGDTMGTVKIWD 175
Score = 42 (19.8 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 8/25 (32%), Positives = 11/25 (44%)
Query: 21 YVSSLALAGKFLYTGSSDNEVRSWD 45
Y+SS+ G SD + WD
Sbjct: 105 YISSVDSTSSLFAFGGSDGVITVWD 129
>UNIPROTKB|Q6Q0C0 [details] [associations]
symbol:TRAF7 "E3 ubiquitin-protein ligase TRAF7"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016023
"cytoplasmic membrane-bounded vesicle" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0008270 "zinc
ion binding" evidence=NAS] [GO:0016567 "protein ubiquitination"
evidence=IDA] [GO:0042981 "regulation of apoptotic process"
evidence=IMP] [GO:0000185 "activation of MAPKKK activity"
evidence=IDA] [GO:0000151 "ubiquitin ligase complex" evidence=IDA]
[GO:0006915 "apoptotic process" evidence=IDA] [GO:0043410 "positive
regulation of MAPK cascade" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR008974 InterPro:IPR013323 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089 PROSITE:PS50145
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 UniPathway:UPA00143
Pfam:PF00097 Prosite:PS00518 GO:GO:0043231 GO:GO:0005886
GO:GO:0006915 GO:GO:0006355 GO:GO:0042981 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0008270 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016023 GO:GO:0043410 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 InterPro:IPR017907
SUPFAM:SSF49599 Gene3D:3.90.890.10 GO:GO:0000185 EMBL:AY569455
EMBL:AL136921 IPI:IPI00395631 IPI:IPI00470778 RefSeq:NP_115647.2
UniGene:Hs.713632 ProteinModelPortal:Q6Q0C0 SMR:Q6Q0C0
IntAct:Q6Q0C0 MINT:MINT-1161375 STRING:Q6Q0C0 PhosphoSite:Q6Q0C0
DMDM:54036486 PaxDb:Q6Q0C0 PRIDE:Q6Q0C0 Ensembl:ENST00000326181
GeneID:84231 KEGG:hsa:84231 UCSC:uc002cow.3 CTD:84231
GeneCards:GC16P002205 HGNC:HGNC:20456 HPA:HPA041229 MIM:606692
neXtProt:NX_Q6Q0C0 PharmGKB:PA134917323 HOGENOM:HOG000220840
HOVERGEN:HBG055270 InParanoid:Q6Q0C0 KO:K10646 OMA:ALCIQGN
OrthoDB:EOG4BRWK8 PhylomeDB:Q6Q0C0 ChiTaRS:TRAF7 GenomeRNAi:84231
NextBio:73692 ArrayExpress:Q6Q0C0 Bgee:Q6Q0C0 CleanEx:HS_TRAF7
Genevestigator:Q6Q0C0 GermOnline:ENSG00000131653 Uniprot:Q6Q0C0
Length = 670
Score = 212 (79.7 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 81/305 (26%), Positives = 143/305 (46%)
Query: 11 CLTTLKGHNSYVSSLAL--AGKFLYTGSSDNEVRSWD-CNTFSSELDQEFLSNNNIVAVG 67
C T GH V L + G L++GSSD ++ WD C T+ Q+ L ++
Sbjct: 388 CKGTFVGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKC---QKTLEGHD----- 439
Query: 68 KGAVKSLVVLADKLFSAHQDHKIRVWKINNQEP-------DHQKYTRLATLPTLGDRAIK 120
G V +L + KL+S D I VW I N + D+ T +++ L ++K
Sbjct: 440 -GIVLALCIQGCKLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNVLFSGSLK 498
Query: 121 LLMPKNHV--QIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLE 178
+ + V +++ K T ++H V AL ++ LYS S+ +TIKIW C+
Sbjct: 499 AIKVWDIVGTELKLKKELTGLNHW--VRALVAA--QSYLYSGSY-QTIKIWDIRTLDCIH 553
Query: 179 SITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALAL 238
+ ++ ++A+++ + G+ + I VW +K+ V L H + ALA+
Sbjct: 554 -VLQTSGGSVYSIAVTNH-HIVCGTYENLIHVWDIE--SKEQ--VRTLTGHVGTVYALAV 607
Query: 239 --SCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADK 296
+ D + ++S + DRS+ VW + N++ L H S+ +AV + SG+ D
Sbjct: 608 ISTPDQTKVFSASYDRSLRVWSMD----NMICTQTLLRHQGSVTALAVSRGRLFSGAVDS 663
Query: 297 TIRIW 301
T+++W
Sbjct: 664 TVKVW 668
Score = 160 (61.4 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 59/184 (32%), Positives = 84/184 (45%)
Query: 174 FKCLESITNAHDDAINAVALSDDGDV-YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSG 232
FKC + H + + + GD+ ++GS+DK IKVW K LE H+ G
Sbjct: 386 FKCKGTFVG-HQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKCQK---TLEGHD-G 440
Query: 233 INALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSG 292
I LAL G LYSG+ D +IIVW+ + N+ V +R H + + +++ SG
Sbjct: 441 I-VLALCIQGCKLYSGSADCTIIVWDIQ----NLQKVNTIRAHDNPVCTLVSSHNVLFSG 495
Query: 293 SADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIK 352
S K I++W + L G V+ L AA SYL SGS IK
Sbjct: 496 SL-KAIKVWDIVGTELKLKKELTGLNHWVRALVAA----------QSYLY-SGSYQT-IK 542
Query: 353 VWQI 356
+W I
Sbjct: 543 IWDI 546
Score = 155 (59.6 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 57/190 (30%), Positives = 94/190 (49%)
Query: 137 TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRT-SDFKCLESITNAHDDAINAVALSD 195
T+V H V L + LL+S S D+TIK+W T + +KC +++ HD + A+ +
Sbjct: 391 TFVGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKCQKTL-EGHDGIVLALCIQG 449
Query: 196 DGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSII 255
+Y+GSAD I VW K V+ + H++ + L S +VL+SG+ ++I
Sbjct: 450 C-KLYSGSADCTIIVWDIQNLQK----VNTIRAHDNPVCTLVSS--HNVLFSGSL-KAIK 501
Query: 256 VWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLE 315
VW+ + + + L G + + + SGS +TI+IW I R C+ VL+
Sbjct: 502 VWDIVGTE--LKLKKELTGLNHWVRALVAAQSYLYSGSY-QTIKIW-DI-RTLDCIHVLQ 556
Query: 316 GHRGPVKCLA 325
G V +A
Sbjct: 557 TSGGSVYSIA 566
Score = 148 (57.2 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 67/257 (26%), Positives = 107/257 (41%)
Query: 9 HHCLTTLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGK 68
+ C TL+GH+ V +L + G LY+GS+D + WD L N +
Sbjct: 429 YKCQKTLEGHDGIVLALCIQGCKLYSGSADCTIIVWDIQN---------LQKVNTIRAHD 479
Query: 69 GAVKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQK-YTRLATLPTLGDRAIKLLMPKNH 127
V +LV + LFS I+VW I E +K T L A L ++
Sbjct: 480 NPVCTLVSSHNVLFSGSLK-AIKVWDIVGTELKLKKELTGLNHWVRALVAAQSYLYSGSY 538
Query: 128 VQIR----RHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA 183
I+ R C V S ++ + +++ I +W + + ++T
Sbjct: 539 QTIKIWDIRTLDCIHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQVRTLTG- 597
Query: 184 HDDAINAVAL---SDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSC 240
H + A+A+ D V++ S D+ ++VW S N L RH + ALA+S
Sbjct: 598 HVGTVYALAVISTPDQTKVFSASYDRSLRVW--SMDNM--ICTQTLLRHQGSVTALAVS- 652
Query: 241 DGSVLYSGACDRSIIVW 257
G L+SGA D ++ VW
Sbjct: 653 RGR-LFSGAVDSTVKVW 668
>MGI|MGI:3042141 [details] [associations]
symbol:Traf7 "TNF receptor-associated factor 7"
species:10090 "Mus musculus" [GO:0000151 "ubiquitin ligase complex"
evidence=ISO] [GO:0000185 "activation of MAPKKK activity"
evidence=ISO] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=ISA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016874
"ligase activity" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=ISO] [GO:0043410 "positive regulation of MAPK cascade"
evidence=ISA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008974
InterPro:IPR013323 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50145 PROSITE:PS50294 SMART:SM00184
SMART:SM00320 UniPathway:UPA00143 MGI:MGI:3042141 Pfam:PF00097
Prosite:PS00518 GO:GO:0006915 GO:GO:0006355 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016023
GO:GO:0043410 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
GO:GO:0000185 GermOnline:ENSMUSG00000052752 HOGENOM:HOG000220840
HOVERGEN:HBG055270 EMBL:BC005649 EMBL:BC008598 IPI:IPI00474463
UniGene:Mm.275150 ProteinModelPortal:Q922B6 SMR:Q922B6
STRING:Q922B6 PaxDb:Q922B6 PRIDE:Q922B6 UCSC:uc008awq.2
NextBio:377255 Bgee:Q922B6 CleanEx:MM_TRAF7 Genevestigator:Q922B6
Uniprot:Q922B6
Length = 594
Score = 211 (79.3 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 81/305 (26%), Positives = 143/305 (46%)
Query: 11 CLTTLKGHNSYVSSLAL--AGKFLYTGSSDNEVRSWD-CNTFSSELDQEFLSNNNIVAVG 67
C T GH V L + G L++GSSD ++ WD C T+ Q+ L ++
Sbjct: 312 CKGTFVGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKC---QKTLEGHD----- 363
Query: 68 KGAVKSLVVLADKLFSAHQDHKIRVWKINNQEP-------DHQKYTRLATLPTLGDRAIK 120
G V +L + KL+S D I VW I N + D+ T +++ L ++K
Sbjct: 364 -GIVLALCIQGCKLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNMLFSGSLK 422
Query: 121 LLMPKNHV--QIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLE 178
+ + V +++ K T ++H V AL ++ LYS S+ +TIKIW C+
Sbjct: 423 AIKVWDIVGTELKLKKELTGLNHW--VRALVAA--QSYLYSGSY-QTIKIWDIRTLDCIH 477
Query: 179 SITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALAL 238
+ ++ ++A+++ + G+ + I VW +K+ V L H + ALA+
Sbjct: 478 -VLQTSGGSVYSIAVTNH-HIVCGTYENLIHVWDIE--SKEQ--VRTLTGHVGTVYALAV 531
Query: 239 --SCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADK 296
+ D + ++S + DRS+ VW + N++ L H S+ +AV + SG+ D
Sbjct: 532 ISTPDQTKVFSASYDRSLRVWSMD----NMICTQTLLRHQGSVTALAVSRGRLFSGAVDS 587
Query: 297 TIRIW 301
T+++W
Sbjct: 588 TVKVW 592
Score = 161 (61.7 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 59/184 (32%), Positives = 84/184 (45%)
Query: 174 FKCLESITNAHDDAINAVALSDDGDV-YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSG 232
FKC + H + + + GD+ ++GS+DK IKVW K LE H+ G
Sbjct: 310 FKCKGTFVG-HQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKCQK---TLEGHD-G 364
Query: 233 INALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSG 292
I LAL G LYSG+ D +IIVW+ + N+ V +R H + + +++ SG
Sbjct: 365 I-VLALCIQGCKLYSGSADCTIIVWDIQ----NLQKVNTIRAHDNPVCTLVSSHNMLFSG 419
Query: 293 SADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIK 352
S K I++W + L G V+ L AA SYL SGS IK
Sbjct: 420 SL-KAIKVWDIVGTELKLKKELTGLNHWVRALVAA----------QSYLY-SGSYQT-IK 466
Query: 353 VWQI 356
+W I
Sbjct: 467 IWDI 470
Score = 152 (58.6 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 56/190 (29%), Positives = 94/190 (49%)
Query: 137 TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRT-SDFKCLESITNAHDDAINAVALSD 195
T+V H V L + LL+S S D+TIK+W T + +KC +++ HD + A+ +
Sbjct: 315 TFVGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKCQKTL-EGHDGIVLALCIQG 373
Query: 196 DGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSII 255
+Y+GSAD I VW K V+ + H++ + L S ++L+SG+ ++I
Sbjct: 374 C-KLYSGSADCTIIVWDIQNLQK----VNTIRAHDNPVCTLVSS--HNMLFSGSL-KAIK 425
Query: 256 VWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLE 315
VW+ + + + L G + + + SGS +TI+IW I R C+ VL+
Sbjct: 426 VWDIVGTE--LKLKKELTGLNHWVRALVAAQSYLYSGSY-QTIKIW-DI-RTLDCIHVLQ 480
Query: 316 GHRGPVKCLA 325
G V +A
Sbjct: 481 TSGGSVYSIA 490
Score = 149 (57.5 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 67/257 (26%), Positives = 107/257 (41%)
Query: 9 HHCLTTLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGK 68
+ C TL+GH+ V +L + G LY+GS+D + WD L N +
Sbjct: 353 YKCQKTLEGHDGIVLALCIQGCKLYSGSADCTIIVWDIQN---------LQKVNTIRAHD 403
Query: 69 GAVKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQK-YTRLATLPTLGDRAIKLLMPKNH 127
V +LV + LFS I+VW I E +K T L A L ++
Sbjct: 404 NPVCTLVSSHNMLFSGSLK-AIKVWDIVGTELKLKKELTGLNHWVRALVAAQSYLYSGSY 462
Query: 128 VQIR----RHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA 183
I+ R C V S ++ + +++ I +W + + ++T
Sbjct: 463 QTIKIWDIRTLDCIHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQVRTLTG- 521
Query: 184 HDDAINAVAL---SDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSC 240
H + A+A+ D V++ S D+ ++VW S N L RH + ALA+S
Sbjct: 522 HVGTVYALAVISTPDQTKVFSASYDRSLRVW--SMDNM--ICTQTLLRHQGSVTALAVS- 576
Query: 241 DGSVLYSGACDRSIIVW 257
G L+SGA D ++ VW
Sbjct: 577 RGR-LFSGAVDSTVKVW 592
>RGD|1559653 [details] [associations]
symbol:Traf7 "TNF receptor-associated factor 7, E3 ubiquitin
protein ligase" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=ISO] [GO:0000185 "activation of
MAPKKK activity" evidence=ISO] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA;ISO] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0006915 "apoptotic process" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0042981 "regulation of apoptotic
process" evidence=ISO] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] [GO:0043410 "positive regulation of MAPK
cascade" evidence=ISO] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008974
InterPro:IPR013323 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
Pfam:PF00097 RGD:1559653 Prosite:PS00518 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0008270 InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 IPI:IPI00198753 ProteinModelPortal:D4A5P7
Ensembl:ENSRNOT00000004222 UCSC:RGD:1559653 ArrayExpress:D4A5P7
Uniprot:D4A5P7
Length = 629
Score = 211 (79.3 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 81/305 (26%), Positives = 143/305 (46%)
Query: 11 CLTTLKGHNSYVSSLAL--AGKFLYTGSSDNEVRSWD-CNTFSSELDQEFLSNNNIVAVG 67
C T GH V L + G L++GSSD ++ WD C T+ Q+ L ++
Sbjct: 347 CKGTFVGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKC---QKTLEGHD----- 398
Query: 68 KGAVKSLVVLADKLFSAHQDHKIRVWKINNQEP-------DHQKYTRLATLPTLGDRAIK 120
G V +L + KL+S D I VW I N + D+ T +++ L ++K
Sbjct: 399 -GIVLALCIQGCKLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNMLFSGSLK 457
Query: 121 LLMPKNHV--QIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLE 178
+ + V +++ K T ++H V AL ++ LYS S+ +TIKIW C+
Sbjct: 458 AIKVWDIVGTELKLKKELTGLNHW--VRALVAA--QSYLYSGSY-QTIKIWDIRTLDCIH 512
Query: 179 SITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALAL 238
+ ++ ++A+++ + G+ + I VW +K+ V L H + ALA+
Sbjct: 513 -VLQTSGGSVYSIAVTNH-HIVCGTYENLIHVWDIE--SKEQ--VRTLTGHVGTVYALAV 566
Query: 239 --SCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADK 296
+ D + ++S + DRS+ VW + N++ L H S+ +AV + SG+ D
Sbjct: 567 ISTPDQTKVFSASYDRSLRVWSMD----NMICTQTLLRHQGSVTALAVSRGRLFSGAVDS 622
Query: 297 TIRIW 301
T+++W
Sbjct: 623 TVKVW 627
Score = 161 (61.7 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 59/184 (32%), Positives = 84/184 (45%)
Query: 174 FKCLESITNAHDDAINAVALSDDGDV-YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSG 232
FKC + H + + + GD+ ++GS+DK IKVW K LE H+ G
Sbjct: 345 FKCKGTFVG-HQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKCQK---TLEGHD-G 399
Query: 233 INALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSG 292
I LAL G LYSG+ D +IIVW+ + N+ V +R H + + +++ SG
Sbjct: 400 I-VLALCIQGCKLYSGSADCTIIVWDIQ----NLQKVNTIRAHDNPVCTLVSSHNMLFSG 454
Query: 293 SADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIK 352
S K I++W + L G V+ L AA SYL SGS IK
Sbjct: 455 SL-KAIKVWDIVGTELKLKKELTGLNHWVRALVAA----------QSYLY-SGSYQT-IK 501
Query: 353 VWQI 356
+W I
Sbjct: 502 IWDI 505
Score = 152 (58.6 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 56/190 (29%), Positives = 94/190 (49%)
Query: 137 TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRT-SDFKCLESITNAHDDAINAVALSD 195
T+V H V L + LL+S S D+TIK+W T + +KC +++ HD + A+ +
Sbjct: 350 TFVGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKCQKTL-EGHDGIVLALCIQG 408
Query: 196 DGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSII 255
+Y+GSAD I VW K V+ + H++ + L S ++L+SG+ ++I
Sbjct: 409 C-KLYSGSADCTIIVWDIQNLQK----VNTIRAHDNPVCTLVSS--HNMLFSGSL-KAIK 460
Query: 256 VWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLE 315
VW+ + + + L G + + + SGS +TI+IW I R C+ VL+
Sbjct: 461 VWDIVGTE--LKLKKELTGLNHWVRALVAAQSYLYSGSY-QTIKIW-DI-RTLDCIHVLQ 515
Query: 316 GHRGPVKCLA 325
G V +A
Sbjct: 516 TSGGSVYSIA 525
Score = 149 (57.5 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 67/257 (26%), Positives = 107/257 (41%)
Query: 9 HHCLTTLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGK 68
+ C TL+GH+ V +L + G LY+GS+D + WD L N +
Sbjct: 388 YKCQKTLEGHDGIVLALCIQGCKLYSGSADCTIIVWDIQN---------LQKVNTIRAHD 438
Query: 69 GAVKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQK-YTRLATLPTLGDRAIKLLMPKNH 127
V +LV + LFS I+VW I E +K T L A L ++
Sbjct: 439 NPVCTLVSSHNMLFSGSLK-AIKVWDIVGTELKLKKELTGLNHWVRALVAAQSYLYSGSY 497
Query: 128 VQIR----RHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA 183
I+ R C V S ++ + +++ I +W + + ++T
Sbjct: 498 QTIKIWDIRTLDCIHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQVRTLTG- 556
Query: 184 HDDAINAVAL---SDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSC 240
H + A+A+ D V++ S D+ ++VW S N L RH + ALA+S
Sbjct: 557 HVGTVYALAVISTPDQTKVFSASYDRSLRVW--SMDNM--ICTQTLLRHQGSVTALAVS- 611
Query: 241 DGSVLYSGACDRSIIVW 257
G L+SGA D ++ VW
Sbjct: 612 RGR-LFSGAVDSTVKVW 627
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 212 (79.7 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 71/233 (30%), Positives = 114/233 (48%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTS--D--FKCLESITNAHDDAINAVALSD- 195
H D V L ++D L + + D T+++W + D +KC+ T H ++ AVAL
Sbjct: 363 HTDIVLTLDSSEDGVWLATGAKDNTVRLWNLNIEDNVYKCIHVFTG-HTASVTAVALGPL 421
Query: 196 DGDVY-----TGSADKKIKVWRR-SPGNKK---HSLVDVLERHNSGINALALSCDGSVLY 246
D + Y + S D+ +K + S NK + V ++ H+ +NA+ +S DG ++
Sbjct: 422 DVNGYPTFLASSSQDRTLKRFNLGSQLNKSDFSNRAVWTIKAHDRDVNAIQVSKDGRIIA 481
Query: 247 SGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAV--VSDLVCSGSADKTIRIWRGI 304
S + D++I +W+ + VVG LRGH + + + S + SGS D+TIRIW +
Sbjct: 482 SASQDKTIKLWDSSTGE----VVGVLRGHRRGVWACSFNPFSRQLASGSGDRTIRIWN-V 536
Query: 305 DRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQIS 357
D C+ LEGH G + L S T V S + D +KVW +S
Sbjct: 537 DTQQ-CVQTLEGHTGAILKLIYI-------SQGTQ--VVSAAADGLVKVWSLS 579
Score = 206 (77.6 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 75/230 (32%), Positives = 109/230 (47%)
Query: 141 HVDAVSALALTKDE-----TLLYSVSWDRTIKIWRT------SDFKCLESIT-NAHDDAI 188
H +V+A+AL + T L S S DRT+K + SDF T AHD +
Sbjct: 409 HTASVTAVALGPLDVNGYPTFLASSSQDRTLKRFNLGSQLNKSDFSNRAVWTIKAHDRDV 468
Query: 189 NAVALSDDGDVY-TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYS 247
NA+ +S DG + + S DK IK+W S G +V VL H G+ A + + L S
Sbjct: 469 NAIQVSKDGRIIASASQDKTIKLWDSSTGE----VVGVLRGHRRGVWACSFNPFSRQLAS 524
Query: 248 GACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIWRGID 305
G+ DR+I +W + V L GHT +IL + +S V S +AD +++W +
Sbjct: 525 GSGDRTIRIWNVDTQQ----CVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVW-SLS 579
Query: 306 RNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQ 355
C+A L+ H V LA+ R D S L+ SG D + VW+
Sbjct: 580 SG-ECVATLDNHEDRVWALAS-----RFDGS----LLVSGGADAVVSVWK 619
Score = 156 (60.0 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 44/171 (25%), Positives = 75/171 (43%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSD-DGDV 199
H V+A+ ++KD ++ S S D+TIK+W +S + + + H + A + + +
Sbjct: 464 HDRDVNAIQVSKDGRIIASASQDKTIKLWDSSTGEVV-GVLRGHRRGVWACSFNPFSRQL 522
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEK 259
+GS D+ I++W V LE H I L G+ + S A D + VW
Sbjct: 523 ASGSGDRTIRIWNVDT----QQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSL 578
Query: 260 EEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIWRGIDRNY 308
+ V L H + +A D L+ SG AD + +W+ + Y
Sbjct: 579 SSGE----CVATLDNHEDRVWALASRFDGSLLVSGGADAVVSVWKDVTEEY 625
Score = 156 (60.0 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 74/335 (22%), Positives = 137/335 (40%)
Query: 12 LTTLKGHNSYVSSLAL--AGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIV-AVGK 68
+ ++K H + V ++ + L TG ++ V+ WD + + F + ++ A+
Sbjct: 96 IKSMKAHETPVITMTIDPTNTLLATGGAEGLVKVWDIA--GAYVTHSFRGHGGVISALCF 153
Query: 69 GAVKSLVVLADKLFSAHQDHKIRVWKINNQEP-----DHQKYTRLATLPTLGDRAIKLLM 123
G ++ VLA S D ++R+W +N+ H R T G +
Sbjct: 154 GKHQNTWVLA----SGADDSRVRLWDLNSSRSMAVFEGHSSVIRGLTFEPTGSFLLSGSR 209
Query: 124 PKNHVQI----RRH--KTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCL 177
K VQ+ +R +T H V+A+ + +E +LY+ I W L
Sbjct: 210 DKT-VQVWNIKKRSAVRTIPVFHSVEAIGWVNGQPEEKILYTAGEGNLILAWDWKSGSRL 268
Query: 178 E---SITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGIN 234
+ T++ +AI V + + + +D + + +R PG + + + + S
Sbjct: 269 DPGVDTTHSETNAIIQVVPFSENTLLSVHSDLSLLLRKRVPGE---GFITIKKLNGSFDE 325
Query: 235 ALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLV--CSG 292
+ + G + C + + + DG V G L GHT +L + D V +G
Sbjct: 326 VIDCAWIGDD-HLAVCSNTEFI-DVISTDGT-QVFGVLEGHTDIVLTLDSSEDGVWLATG 382
Query: 293 SADKTIRIWR-GIDRN-YTCLAVLEGHRGPVKCLA 325
+ D T+R+W I+ N Y C+ V GH V +A
Sbjct: 383 AKDNTVRLWNLNIEDNVYKCIHVFTGHTASVTAVA 417
Score = 130 (50.8 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 50/214 (23%), Positives = 91/214 (42%)
Query: 148 LALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSADKK 207
+A +E +L + DR I R+ + L SI DD + A+A++ D + +
Sbjct: 25 VAFDSNEKILVTALTDRIIGT-RSETGERLFSIKKDEDDYVTALAITSDSKKLIAAFRSR 83
Query: 208 IKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNIL 267
+ P ++ + ++ H + + + + ++L +G + + VW D
Sbjct: 84 LLTIYEIPSGRR---IKSMKAHETPVITMTIDPTNTLLATGGAEGLVKVW----DIAGAY 136
Query: 268 VVGALRGH--TKSILCMAVVSD--LVCSGSADKTIRIWRGIDRNYT-CLAVLEGHRGPVK 322
V + RGH S LC + ++ SG+ D +R+W D N + +AV EGH ++
Sbjct: 137 VTHSFRGHGGVISALCFGKHQNTWVLASGADDSRVRLW---DLNSSRSMAVFEGHSSVIR 193
Query: 323 CLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
L T + SGS D ++VW I
Sbjct: 194 GLTF---------EPTGSFLLSGSRDKTVQVWNI 218
Score = 129 (50.5 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 43/164 (26%), Positives = 71/164 (43%)
Query: 143 DAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY-T 201
D V+ALA+T D L + R + I+ + ++S+ AH+ + + + + T
Sbjct: 62 DYVTALAITSDSKKLIAAFRSRLLTIYEIPSGRRIKSM-KAHETPVITMTIDPTNTLLAT 120
Query: 202 GSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGS--VLYSGACDRSIIVWEK 259
G A+ +KVW + HS H I+AL + VL SGA D + +W+
Sbjct: 121 GGAEGLVKVWDIAGAYVTHSF----RGHGGVISALCFGKHQNTWVLASGADDSRVRLWDL 176
Query: 260 EEDDGNILVVGALRGHTKSI--LCMAVVSDLVCSGSADKTIRIW 301
+ GH+ I L + SGS DKT+++W
Sbjct: 177 NSSRS----MAVFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVW 216
Score = 128 (50.1 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 56/233 (24%), Positives = 102/233 (43%)
Query: 3 NLSVVD--HHCLTTLKGHNSYVSSLALA-----G--KFLYTGSSDNEVRSWDCNTFSSEL 53
NL++ D + C+ GH + V+++AL G FL + S D ++ ++ S+L
Sbjct: 392 NLNIEDNVYKCIHVFTGHTASVTAVALGPLDVNGYPTFLASSSQDRTLKRFN---LGSQL 448
Query: 54 DQEFLSNNNI--VAVGKGAVKSLVVLADK--LFSAHQDHKIRVWKINNQEP-----DHQK 104
++ SN + + V ++ V D + SA QD I++W + E H++
Sbjct: 449 NKSDFSNRAVWTIKAHDRDVNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRR 508
Query: 105 YTRLATLPTLGDRAIKLLMPKNHVQIRRHKT--C--TWVHHVDAVSALALTKDETLLYSV 160
+ R + ++I T C T H A+ L T + S
Sbjct: 509 GVWACSFNPFS-RQLASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSA 567
Query: 161 SWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY-TGSADKKIKVWR 212
+ D +K+W S +C+ ++ N H+D + A+A DG + +G AD + VW+
Sbjct: 568 AADGLVKVWSLSSGECVATLDN-HEDRVWALASRFDGSLLVSGGADAVVSVWK 619
>UNIPROTKB|E2QXW8 [details] [associations]
symbol:TRAF7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043410 "positive regulation of MAPK cascade"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0000185 "activation of MAPKKK activity" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR008974 InterPro:IPR013323
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50145 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
Pfam:PF00097 Prosite:PS00518 GO:GO:0043231 GO:GO:0005886
GO:GO:0006915 GO:GO:0042981 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043410 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 InterPro:IPR017907
SUPFAM:SSF49599 Gene3D:3.90.890.10 GeneTree:ENSGT00690000101849
GO:GO:0000185 CTD:84231 KO:K10646 OMA:ALCIQGN EMBL:AAEX03004625
RefSeq:XP_852015.1 ProteinModelPortal:E2QXW8
Ensembl:ENSCAFT00000030876 GeneID:609824 KEGG:cfa:609824
NextBio:20895405 Uniprot:E2QXW8
Length = 670
Score = 211 (79.3 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 81/305 (26%), Positives = 143/305 (46%)
Query: 11 CLTTLKGHNSYVSSLAL--AGKFLYTGSSDNEVRSWD-CNTFSSELDQEFLSNNNIVAVG 67
C T GH V L + G L++GSSD ++ WD C T+ Q+ L ++
Sbjct: 388 CKGTFVGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKC---QKTLEGHD----- 439
Query: 68 KGAVKSLVVLADKLFSAHQDHKIRVWKINNQEP-------DHQKYTRLATLPTLGDRAIK 120
G V +L + KL+S D I VW I N + D+ T +++ L ++K
Sbjct: 440 -GIVLALCIQGCKLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNMLFSGSLK 498
Query: 121 LLMPKNHV--QIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLE 178
+ + V +++ K T ++H V AL ++ LYS S+ +TIKIW C+
Sbjct: 499 AIKVWDIVGTELKLKKELTGLNHW--VRALVAA--QSYLYSGSY-QTIKIWDIRTLDCIH 553
Query: 179 SITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALAL 238
+ ++ ++A+++ + G+ + I VW +K+ V L H + ALA+
Sbjct: 554 -VLQTSGGSVYSIAVTNH-HIVCGTYENLIHVWDIE--SKEQ--VRTLTGHVGTVYALAV 607
Query: 239 --SCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADK 296
+ D + ++S + DRS+ VW + N++ L H S+ +AV + SG+ D
Sbjct: 608 ISTPDQTKVFSASYDRSLRVWSMD----NMICTQTLLRHQGSVTALAVSRGRLFSGAVDS 663
Query: 297 TIRIW 301
T+++W
Sbjct: 664 TVKVW 668
Score = 161 (61.7 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 59/184 (32%), Positives = 84/184 (45%)
Query: 174 FKCLESITNAHDDAINAVALSDDGDV-YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSG 232
FKC + H + + + GD+ ++GS+DK IKVW K LE H+ G
Sbjct: 386 FKCKGTFVG-HQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKCQK---TLEGHD-G 440
Query: 233 INALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSG 292
I LAL G LYSG+ D +IIVW+ + N+ V +R H + + +++ SG
Sbjct: 441 I-VLALCIQGCKLYSGSADCTIIVWDIQ----NLQKVNTIRAHDNPVCTLVSSHNMLFSG 495
Query: 293 SADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIK 352
S K I++W + L G V+ L AA SYL SGS IK
Sbjct: 496 SL-KAIKVWDIVGTELKLKKELTGLNHWVRALVAA----------QSYLY-SGSYQT-IK 542
Query: 353 VWQI 356
+W I
Sbjct: 543 IWDI 546
Score = 152 (58.6 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 56/190 (29%), Positives = 94/190 (49%)
Query: 137 TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRT-SDFKCLESITNAHDDAINAVALSD 195
T+V H V L + LL+S S D+TIK+W T + +KC +++ HD + A+ +
Sbjct: 391 TFVGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKCQKTL-EGHDGIVLALCIQG 449
Query: 196 DGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSII 255
+Y+GSAD I VW K V+ + H++ + L S ++L+SG+ ++I
Sbjct: 450 C-KLYSGSADCTIIVWDIQNLQK----VNTIRAHDNPVCTLVSS--HNMLFSGSL-KAIK 501
Query: 256 VWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLE 315
VW+ + + + L G + + + SGS +TI+IW I R C+ VL+
Sbjct: 502 VWDIVGTE--LKLKKELTGLNHWVRALVAAQSYLYSGSY-QTIKIW-DI-RTLDCIHVLQ 556
Query: 316 GHRGPVKCLA 325
G V +A
Sbjct: 557 TSGGSVYSIA 566
Score = 149 (57.5 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 67/257 (26%), Positives = 107/257 (41%)
Query: 9 HHCLTTLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGK 68
+ C TL+GH+ V +L + G LY+GS+D + WD L N +
Sbjct: 429 YKCQKTLEGHDGIVLALCIQGCKLYSGSADCTIIVWDIQN---------LQKVNTIRAHD 479
Query: 69 GAVKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQK-YTRLATLPTLGDRAIKLLMPKNH 127
V +LV + LFS I+VW I E +K T L A L ++
Sbjct: 480 NPVCTLVSSHNMLFSGSLK-AIKVWDIVGTELKLKKELTGLNHWVRALVAAQSYLYSGSY 538
Query: 128 VQIR----RHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA 183
I+ R C V S ++ + +++ I +W + + ++T
Sbjct: 539 QTIKIWDIRTLDCIHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQVRTLTG- 597
Query: 184 HDDAINAVAL---SDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSC 240
H + A+A+ D V++ S D+ ++VW S N L RH + ALA+S
Sbjct: 598 HVGTVYALAVISTPDQTKVFSASYDRSLRVW--SMDNM--ICTQTLLRHQGSVTALAVS- 652
Query: 241 DGSVLYSGACDRSIIVW 257
G L+SGA D ++ VW
Sbjct: 653 RGR-LFSGAVDSTVKVW 668
>UNIPROTKB|I3LMJ3 [details] [associations]
symbol:LOC100738291 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001293 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR008974 InterPro:IPR013323 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50145 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004842 SUPFAM:SSF49599 Gene3D:3.90.890.10
GeneTree:ENSGT00690000101849 EMBL:FP102909
Ensembl:ENSSSCT00000027206 Uniprot:I3LMJ3
Length = 512
Score = 209 (78.6 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 80/305 (26%), Positives = 143/305 (46%)
Query: 11 CLTTLKGHNSYVSSLAL--AGKFLYTGSSDNEVRSWD-CNTFSSELDQEFLSNNNIVAVG 67
C T GH V L + G L++GSSD ++ WD C T+ Q+ L ++
Sbjct: 230 CKGTFVGHQGPVWCLCVYSVGDLLFSGSSDKTIKVWDTCTTYKC---QKTLEGHD----- 281
Query: 68 KGAVKSLVVLADKLFSAHQDHKIRVWKINNQEP-------DHQKYTRLATLPTLGDRAIK 120
G V +L + +L+S D I VW I N + D+ T +++ L ++K
Sbjct: 282 -GIVLALCIQGCRLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNLLFSGSLK 340
Query: 121 LLMPKNHV--QIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLE 178
+ + V +++ K T ++H V AL ++ LYS S+ +TIKIW C+
Sbjct: 341 AIKVWDIVGTELKLKKELTGLNHW--VRALVAA--QSYLYSGSY-QTIKIWDIRTLDCIH 395
Query: 179 SITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALAL 238
+ ++ ++A+++ + G+ + I VW +K+ V L H + ALA+
Sbjct: 396 -VLQTSGGSVYSIAVTNH-HIVCGTYENLIHVWDIE--SKEQ--VRTLTGHVGTVYALAV 449
Query: 239 --SCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADK 296
+ D + ++S + DRS+ VW + N++ L H S+ +AV + SG+ D
Sbjct: 450 ISTPDQTKVFSASYDRSLRVWSMD----NMICTQTLLRHQGSVTALAVSRGRLFSGAVDS 505
Query: 297 TIRIW 301
T+++W
Sbjct: 506 TVKVW 510
Score = 162 (62.1 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 60/184 (32%), Positives = 84/184 (45%)
Query: 174 FKCLESITNAHDDAINAVALSDDGDV-YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSG 232
FKC + H + + + GD+ ++GS+DK IKVW K LE H+ G
Sbjct: 228 FKCKGTFVG-HQGPVWCLCVYSVGDLLFSGSSDKTIKVWDTCTTYKCQK---TLEGHD-G 282
Query: 233 INALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSG 292
I LAL G LYSG+ D +IIVW+ + N+ V +R H + + +L+ SG
Sbjct: 283 I-VLALCIQGCRLYSGSADCTIIVWDIQ----NLQKVNTIRAHDNPVCTLVSSHNLLFSG 337
Query: 293 SADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIK 352
S K I++W + L G V+ L AA SYL SGS IK
Sbjct: 338 SL-KAIKVWDIVGTELKLKKELTGLNHWVRALVAA----------QSYLY-SGSYQT-IK 384
Query: 353 VWQI 356
+W I
Sbjct: 385 IWDI 388
Score = 151 (58.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 56/190 (29%), Positives = 94/190 (49%)
Query: 137 TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRT-SDFKCLESITNAHDDAINAVALSD 195
T+V H V L + LL+S S D+TIK+W T + +KC +++ HD + A+ +
Sbjct: 233 TFVGHQGPVWCLCVYSVGDLLFSGSSDKTIKVWDTCTTYKCQKTL-EGHDGIVLALCIQG 291
Query: 196 DGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSII 255
+Y+GSAD I VW K V+ + H++ + L S ++L+SG+ ++I
Sbjct: 292 CR-LYSGSADCTIIVWDIQNLQK----VNTIRAHDNPVCTLVSS--HNLLFSGSL-KAIK 343
Query: 256 VWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLE 315
VW+ + + + L G + + + SGS +TI+IW I R C+ VL+
Sbjct: 344 VWDIVGTE--LKLKKELTGLNHWVRALVAAQSYLYSGSY-QTIKIW-DI-RTLDCIHVLQ 398
Query: 316 GHRGPVKCLA 325
G V +A
Sbjct: 399 TSGGSVYSIA 408
Score = 148 (57.2 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 67/257 (26%), Positives = 107/257 (41%)
Query: 9 HHCLTTLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGK 68
+ C TL+GH+ V +L + G LY+GS+D + WD L N +
Sbjct: 271 YKCQKTLEGHDGIVLALCIQGCRLYSGSADCTIIVWDIQN---------LQKVNTIRAHD 321
Query: 69 GAVKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQK-YTRLATLPTLGDRAIKLLMPKNH 127
V +LV + LFS I+VW I E +K T L A L ++
Sbjct: 322 NPVCTLVSSHNLLFSGSLK-AIKVWDIVGTELKLKKELTGLNHWVRALVAAQSYLYSGSY 380
Query: 128 VQIR----RHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA 183
I+ R C V S ++ + +++ I +W + + ++T
Sbjct: 381 QTIKIWDIRTLDCIHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQVRTLTG- 439
Query: 184 HDDAINAVAL---SDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSC 240
H + A+A+ D V++ S D+ ++VW S N L RH + ALA+S
Sbjct: 440 HVGTVYALAVISTPDQTKVFSASYDRSLRVW--SMDNM--ICTQTLLRHQGSVTALAVS- 494
Query: 241 DGSVLYSGACDRSIIVW 257
G L+SGA D ++ VW
Sbjct: 495 RGR-LFSGAVDSTVKVW 510
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 210 (79.0 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 59/193 (30%), Positives = 93/193 (48%)
Query: 163 DRTIKIWRTSDFKCLESITNAHDD-AINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHS 221
D+ K W + ++ H+D I + + DD V TGS D +KVW G ++
Sbjct: 234 DKIEKNWNANPIMG-SAVLRGHEDHVITCMQIHDDVLV-TGSDDNTLKVWCIDKGEVMYT 291
Query: 222 LVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILC 281
LV H G+ +S G + SG+ DR++ VW DG++L L+GHT ++ C
Sbjct: 292 LVG----HTGGVWTSQISQCGRYIVSGSTDRTVKVWSTV--DGSLL--HTLQGHTSTVRC 343
Query: 282 MAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYL 341
MA+ ++ +GS D T+R+W + LA L GH V+C+ + D +
Sbjct: 344 MAMAGSILVTGSRDTTLRVWDVESGRH--LATLHGHHAAVRCV-------QFDGTT---- 390
Query: 342 VCSGSLDCDIKVW 354
V SG D +K+W
Sbjct: 391 VVSGGYDFTVKIW 403
Score = 192 (72.6 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 55/197 (27%), Positives = 92/197 (46%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H V +A+ ++L + S D T+++W + L ++ + H A+ V D V
Sbjct: 337 HTSTVRCMAMAG--SILVTGSRDTTLRVWDVESGRHLATL-HGHHAAVRCVQF-DGTTVV 392
Query: 201 TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKE 260
+G D +K+W G + L HN+ + +L + S++ SG+ D SI VW+
Sbjct: 393 SGGYDFTVKIWNAHTGR----CIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFT 448
Query: 261 EDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGP 320
+G V L+GHT M + +++ S +AD +R+W I TC+ +L GHR
Sbjct: 449 RPEGQECVA-LLQGHTSLTSGMQLRGNILVSCNADSHVRVW-DIHEG-TCVHMLSGHRSA 505
Query: 321 VKCLAAAIDNDRCDSSD 337
+ L N SSD
Sbjct: 506 ITSLQWFGRNMVATSSD 522
Score = 190 (71.9 bits), Expect = 5.6e-12, P = 5.6e-12
Identities = 52/185 (28%), Positives = 88/185 (47%)
Query: 137 TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDD 196
T V H V +++ + S S DRT+K+W T D L ++ H + +A++
Sbjct: 291 TLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTL-QGHTSTVRCMAMA-- 347
Query: 197 GDVY-TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSII 255
G + TGS D ++VW G +H + L H++ + + DG+ + SG D ++
Sbjct: 348 GSILVTGSRDTTLRVWDVESG--RH--LATLHGHHAAVRCVQF--DGTTVVSGGYDFTVK 401
Query: 256 VWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIWRGI-DRNYTCLA 312
+W G + L GH + + S+ +VCSGS D +IR+W C+A
Sbjct: 402 IWNAHT--GRC--IRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVA 457
Query: 313 VLEGH 317
+L+GH
Sbjct: 458 LLQGH 462
Score = 179 (68.1 bits), Expect = 9.7e-11, P = 9.7e-11
Identities = 75/304 (24%), Positives = 130/304 (42%)
Query: 15 LKGHNSYV-SSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAVKS 73
L+GH +V + + + L TGS DN ++ W C +D+ + + G G S
Sbjct: 251 LRGHEDHVITCMQIHDDVLVTGSDDNTLKVW-C------IDKGEVMYTLVGHTG-GVWTS 302
Query: 74 LVVLADK-LFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLGDRAIKLLMPKNHVQIR- 131
+ + + S D ++VW + H +T+ + L+ +R
Sbjct: 303 QISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGSILVTGSRDTTLRV 362
Query: 132 ------RHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHD 185
RH HH AV + D T + S +D T+KIW +C+ ++T ++
Sbjct: 363 WDVESGRHLATLHGHHA-AVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNN 419
Query: 186 DAINAVALSDDGDVYTGSADKKIKVW--RRSPGNKKHSLVDVLERHNSGINALALSCDGS 243
+ + S+ V +GS D I+VW R G + V +L+ H S + + L G+
Sbjct: 420 RVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQE---CVALLQGHTSLTSGMQLR--GN 474
Query: 244 VLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVS-DLVCSGSADKTIRIWR 302
+L S D + VW+ E G V L GH +I + ++V + S D T+++W
Sbjct: 475 ILVSCNADSHVRVWDIHE--GTC--VHMLSGHRSAITSLQWFGRNMVATSSDDGTVKLW- 529
Query: 303 GIDR 306
I+R
Sbjct: 530 DIER 533
Score = 145 (56.1 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 39/118 (33%), Positives = 57/118 (48%)
Query: 242 GSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIW 301
GS+L +G+ D ++ VW+ E G L L GH ++ C+ V SG D T++IW
Sbjct: 348 GSILVTGSRDTTLRVWDVES--GRHLAT--LHGHHAAVRCVQFDGTTVVSGGYDFTVKIW 403
Query: 302 RGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQISFP 359
C+ L GH V L +++R +VCSGSLD I+VW + P
Sbjct: 404 NA--HTGRCIRTLTGHNNRVYSLL--FESERS-------IVCSGSLDTSIRVWDFTRP 450
Score = 130 (50.8 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 55/233 (23%), Positives = 93/233 (39%)
Query: 5 SVVDHHCLTTLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNT--FSSELDQEFLSNNN 62
S VD L TL+GH S V +A+AG L TGS D +R WD + + L +
Sbjct: 324 STVDGSLLHTLQGHTSTVRCMAMAGSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRC 383
Query: 63 IVAVGKGAVKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLG--DRAIK 120
+ G V K+++AH IR +N + ++ G D +I+
Sbjct: 384 VQFDGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIR 443
Query: 121 LLMPKNHVQIRRHKTCTWVH-HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLES 179
+ + + + + H S + L + +L S + D +++W + C+
Sbjct: 444 VW---DFTRPEGQECVALLQGHTSLTSGMQLRGN--ILVSCNADSHVRVWDIHEGTCVHM 498
Query: 180 ITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSG 232
++ H AI ++ V T S D +K+W G LV + N G
Sbjct: 499 LSG-HRSAITSLQWFGRNMVATSSDDGTVKLWDIERGALIRDLVTLDSGGNGG 550
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 210 (79.0 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 59/193 (30%), Positives = 93/193 (48%)
Query: 163 DRTIKIWRTSDFKCLESITNAHDD-AINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHS 221
D+ K W + ++ H+D I + + DD V TGS D +KVW G ++
Sbjct: 234 DKIEKNWNANPIMG-SAVLRGHEDHVITCMQIHDDVLV-TGSDDNTLKVWCIDKGEVMYT 291
Query: 222 LVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILC 281
LV H G+ +S G + SG+ DR++ VW DG++L L+GHT ++ C
Sbjct: 292 LVG----HTGGVWTSQISQCGRYIVSGSTDRTVKVWSTV--DGSLL--HTLQGHTSTVRC 343
Query: 282 MAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYL 341
MA+ ++ +GS D T+R+W + LA L GH V+C+ + D +
Sbjct: 344 MAMAGSILVTGSRDTTLRVWDVESGRH--LATLHGHHAAVRCV-------QFDGTT---- 390
Query: 342 VCSGSLDCDIKVW 354
V SG D +K+W
Sbjct: 391 VVSGGYDFTVKIW 403
Score = 192 (72.6 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 55/197 (27%), Positives = 92/197 (46%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H V +A+ ++L + S D T+++W + L ++ + H A+ V D V
Sbjct: 337 HTSTVRCMAMAG--SILVTGSRDTTLRVWDVESGRHLATL-HGHHAAVRCVQF-DGTTVV 392
Query: 201 TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKE 260
+G D +K+W G + L HN+ + +L + S++ SG+ D SI VW+
Sbjct: 393 SGGYDFTVKIWNAHTGR----CIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFT 448
Query: 261 EDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGP 320
+G V L+GHT M + +++ S +AD +R+W I TC+ +L GHR
Sbjct: 449 RPEGQECVA-LLQGHTSLTSGMQLRGNILVSCNADSHVRVW-DIHEG-TCVHMLSGHRSA 505
Query: 321 VKCLAAAIDNDRCDSSD 337
+ L N SSD
Sbjct: 506 ITSLQWFGRNMVATSSD 522
Score = 190 (71.9 bits), Expect = 5.6e-12, P = 5.6e-12
Identities = 52/185 (28%), Positives = 88/185 (47%)
Query: 137 TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDD 196
T V H V +++ + S S DRT+K+W T D L ++ H + +A++
Sbjct: 291 TLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTL-QGHTSTVRCMAMA-- 347
Query: 197 GDVY-TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSII 255
G + TGS D ++VW G +H + L H++ + + DG+ + SG D ++
Sbjct: 348 GSILVTGSRDTTLRVWDVESG--RH--LATLHGHHAAVRCVQF--DGTTVVSGGYDFTVK 401
Query: 256 VWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIWRGI-DRNYTCLA 312
+W G + L GH + + S+ +VCSGS D +IR+W C+A
Sbjct: 402 IWNAHT--GRC--IRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVA 457
Query: 313 VLEGH 317
+L+GH
Sbjct: 458 LLQGH 462
Score = 179 (68.1 bits), Expect = 9.7e-11, P = 9.7e-11
Identities = 75/304 (24%), Positives = 130/304 (42%)
Query: 15 LKGHNSYV-SSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAVKS 73
L+GH +V + + + L TGS DN ++ W C +D+ + + G G S
Sbjct: 251 LRGHEDHVITCMQIHDDVLVTGSDDNTLKVW-C------IDKGEVMYTLVGHTG-GVWTS 302
Query: 74 LVVLADK-LFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLGDRAIKLLMPKNHVQIR- 131
+ + + S D ++VW + H +T+ + L+ +R
Sbjct: 303 QISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGSILVTGSRDTTLRV 362
Query: 132 ------RHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHD 185
RH HH AV + D T + S +D T+KIW +C+ ++T ++
Sbjct: 363 WDVESGRHLATLHGHHA-AVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNN 419
Query: 186 DAINAVALSDDGDVYTGSADKKIKVW--RRSPGNKKHSLVDVLERHNSGINALALSCDGS 243
+ + S+ V +GS D I+VW R G + V +L+ H S + + L G+
Sbjct: 420 RVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQE---CVALLQGHTSLTSGMQLR--GN 474
Query: 244 VLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVS-DLVCSGSADKTIRIWR 302
+L S D + VW+ E G V L GH +I + ++V + S D T+++W
Sbjct: 475 ILVSCNADSHVRVWDIHE--GTC--VHMLSGHRSAITSLQWFGRNMVATSSDDGTVKLW- 529
Query: 303 GIDR 306
I+R
Sbjct: 530 DIER 533
Score = 145 (56.1 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 39/118 (33%), Positives = 57/118 (48%)
Query: 242 GSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIW 301
GS+L +G+ D ++ VW+ E G L L GH ++ C+ V SG D T++IW
Sbjct: 348 GSILVTGSRDTTLRVWDVES--GRHLAT--LHGHHAAVRCVQFDGTTVVSGGYDFTVKIW 403
Query: 302 RGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQISFP 359
C+ L GH V L +++R +VCSGSLD I+VW + P
Sbjct: 404 NA--HTGRCIRTLTGHNNRVYSLL--FESERS-------IVCSGSLDTSIRVWDFTRP 450
Score = 130 (50.8 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 55/233 (23%), Positives = 93/233 (39%)
Query: 5 SVVDHHCLTTLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNT--FSSELDQEFLSNNN 62
S VD L TL+GH S V +A+AG L TGS D +R WD + + L +
Sbjct: 324 STVDGSLLHTLQGHTSTVRCMAMAGSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRC 383
Query: 63 IVAVGKGAVKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLG--DRAIK 120
+ G V K+++AH IR +N + ++ G D +I+
Sbjct: 384 VQFDGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIR 443
Query: 121 LLMPKNHVQIRRHKTCTWVH-HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLES 179
+ + + + + H S + L + +L S + D +++W + C+
Sbjct: 444 VW---DFTRPEGQECVALLQGHTSLTSGMQLRGN--ILVSCNADSHVRVWDIHEGTCVHM 498
Query: 180 ITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSG 232
++ H AI ++ V T S D +K+W G LV + N G
Sbjct: 499 LSG-HRSAITSLQWFGRNMVATSSDDGTVKLWDIERGALIRDLVTLDSGGNGG 550
>FB|FBgn0021874 [details] [associations]
symbol:Nle "Notchless" species:7227 "Drosophila melanogaster"
[GO:0007219 "Notch signaling pathway" evidence=ISS;TAS] [GO:0005112
"Notch binding" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005634 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0005112 GeneTree:ENSGT00690000102167 InterPro:IPR011047
SUPFAM:SSF50998 HSSP:P16649 PRINTS:PR00319 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 FlyBase:FBgn0021874 EMBL:AY089286
RefSeq:NP_477294.2 UniGene:Dm.13475 SMR:Q9VPR4 IntAct:Q9VPR4
MINT:MINT-291987 STRING:Q9VPR4 EnsemblMetazoa:FBtr0078075
GeneID:33234 KEGG:dme:Dmel_CG2863 UCSC:CG2863-RA CTD:33234
InParanoid:Q9VPR4 GenomeRNAi:33234 NextBio:782583 Uniprot:Q9VPR4
Length = 488
Score = 177 (67.4 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
Identities = 66/221 (29%), Positives = 99/221 (44%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSD-FKCLESITNAHDDAINAVALSDDGDV 199
H +AV+A+ L+Y+ S DRT+K+WR +D C +AH +N +ALS D +
Sbjct: 250 HTNAVTAVRWG-GAGLIYTSSKDRTVKMWRAADGILCRTFSGHAH--WVNNIALSTDYVL 306
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSV--LYSGACDRSIIVW 257
TG V RS K H + E S + C V L S + D ++ +W
Sbjct: 307 RTGPFHP---VKDRS---KSHLSLSTEELQESALKRYQAVCPDEVESLVSCSDDNTLYLW 360
Query: 258 EKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIWRGIDRNYTCLAVLE 315
++ V + GH + + D L+ S S DK++R+WR D Y +A
Sbjct: 361 RNNQNK----CVERMTGHQNVVNDVKYSPDVKLIASASFDKSVRLWRASDGQY--MATFR 414
Query: 316 GHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
GH V +A + D S L+ SGS D +KVW +
Sbjct: 415 GHVQAVYTVAWSAD---------SRLIVSGSKDSTLKVWSV 446
Score = 168 (64.2 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 74/307 (24%), Positives = 126/307 (41%)
Query: 15 LKGHNSYVSSLALAG-------KFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVG 67
L GH +++ LA + L + S D + R WD ++ N + AV
Sbjct: 200 LSGHKKHINCLAWEPYHRDPECRKLASASGDGDCRIWDVKLGQCLMNIAG-HTNAVTAVR 258
Query: 68 KGAVKSLVVLADKLFSAHQDHKIRVWK-----INNQEPDHQKYTRLATLPTLGDRAIKLL 122
G A ++++ +D +++W+ + H + L T D ++
Sbjct: 259 WGG-------AGLIYTSSKDRTVKMWRAADGILCRTFSGHAHWVNNIALST--DYVLRT- 308
Query: 123 MPKNHVQIRRHKTCTWVHHVDAVSAL----ALTKDET-LLYSVSWDRTIKIWRTSDFKCL 177
P + V+ R + SAL A+ DE L S S D T+ +WR + KC+
Sbjct: 309 GPFHPVKDRSKSHLSLSTEELQESALKRYQAVCPDEVESLVSCSDDNTLYLWRNNQNKCV 368
Query: 178 ESITNAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINAL 236
E +T H + +N V S D + + S DK +++WR S G + H + +
Sbjct: 369 ERMTG-HQNVVNDVKYSPDVKLIASASFDKSVRLWRASDGQ----YMATFRGHVQAVYTV 423
Query: 237 ALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSA 294
A S D ++ SG+ D ++ VW + + L GH + + D V SG
Sbjct: 424 AWSADSRLIVSGSKDSTLKVWSVQTKK----LAQELPGHADEVFGVDWAPDGSRVASGGK 479
Query: 295 DKTIRIW 301
DK I++W
Sbjct: 480 DKVIKLW 486
Score = 166 (63.5 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 69/260 (26%), Positives = 111/260 (42%)
Query: 11 CLTTLKGHNSYVSSLALAGK-FLYTGSSDNEVRSW---D---CNTFSSELDQEFLSNNNI 63
CL + GH + V+++ G +YT S D V+ W D C TFS NNI
Sbjct: 243 CLMNIAGHTNAVTAVRWGGAGLIYTSSKDRTVKMWRAADGILCRTFSGHAHWV----NNI 298
Query: 64 VAVGKGAVKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYTRL-ATLPTLGDRAIKLL 122
A+ + VL F +D ++ +E R A P + +
Sbjct: 299 ------ALSTDYVLRTGPFHPVKDRSKSHLSLSTEELQESALKRYQAVCPDEVESLVSC- 351
Query: 123 MPKNHVQIRRHKT--CT--WVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLE 178
N + + R+ C H + V+ + + D L+ S S+D+++++WR SD + +
Sbjct: 352 SDDNTLYLWRNNQNKCVERMTGHQNVVNDVKYSPDVKLIASASFDKSVRLWRASDGQYMA 411
Query: 179 SITNAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALA 237
+ H A+ VA S D + +GS D +KVW S KK L L H + +
Sbjct: 412 TF-RGHVQAVYTVAWSADSRLIVSGSKDSTLKVW--SVQTKK--LAQELPGHADEVFGVD 466
Query: 238 LSCDGSVLYSGACDRSIIVW 257
+ DGS + SG D+ I +W
Sbjct: 467 WAPDGSRVASGGKDKVIKLW 486
Score = 121 (47.7 bits), Expect = 0.00021, P = 0.00021
Identities = 59/236 (25%), Positives = 99/236 (41%)
Query: 108 LATLPTLGDRAIKLL-MPKNHVQIRRHKTCT--WVHHVDAVSALALTKDETLLYSVSWDR 164
LA++ T + I ++ P+ ++R CT H +AV +L + D L S S D
Sbjct: 84 LASVDT--ENVIDIVYQPQAVFKVRPVTRCTSSMPGHAEAVVSLNFSPDGAHLASGSGDT 141
Query: 165 TIKIW----RTSDFKCLESITNAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKK 219
T+++W T F C H + V+ + DG + +G I +W G +K
Sbjct: 142 TVRLWDLNTETPHFTC-----TGHKQWVLCVSWAPDGKRLASGCKAGSIIIWDPETGQQK 196
Query: 220 HSLVDVLERHNSGINALALSC-----DGSVLYSGACDRSIIVWEKEEDDGNILVVGALRG 274
L H IN LA + L S + D +W+ + G L+ + G
Sbjct: 197 GR---PLSGHKKHINCLAWEPYHRDPECRKLASASGDGDCRIWDVKL--GQCLM--NIAG 249
Query: 275 HTKSILCMAVV-SDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAID 329
HT ++ + + L+ + S D+T+++WR D C GH V +A + D
Sbjct: 250 HTNAVTAVRWGGAGLIYTSSKDRTVKMWRAAD-GILC-RTFSGHAHWVNNIALSTD 303
Score = 75 (31.5 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
Identities = 17/40 (42%), Positives = 22/40 (55%)
Query: 11 CLTTLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNT 48
C +++ GH V SL + G L +GS D VR WD NT
Sbjct: 111 CTSSMPGHAEAVVSLNFSPDGAHLASGSGDTTVRLWDLNT 150
Score = 42 (19.8 bits), Expect = 7.6e-11, Sum P(2) = 7.6e-11
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 70 AVKSLVVLAD--KLFSAHQDHKIRVWKINNQEP 100
AV SL D L S D +R+W +N + P
Sbjct: 121 AVVSLNFSPDGAHLASGSGDTTVRLWDLNTETP 153
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 204 (76.9 bits), Expect = 4.5e-14, P = 4.5e-14
Identities = 78/312 (25%), Positives = 141/312 (45%)
Query: 8 DHHCLTTLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSE--LDQEFLSNNNI 63
++ + TL+GH +SS + GK+L T S+D V+ W+ + E L L N+I
Sbjct: 76 NYKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDI 135
Query: 64 VAVGKGAVKSLVVLAD----KLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLG--DR 117
+ +V +D K+F + K +N + ++L G D
Sbjct: 136 AWSSDS--RCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDE 193
Query: 118 AIKLLMPKNHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCL 177
++++ K + I+ T H D VSA++ +D +L+ S S+D ++IW T++ +C+
Sbjct: 194 SVRIWDVKTGMCIK-----TLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCI 248
Query: 178 ESITNAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINAL 236
+++ + + + V S +G + + D +K+W S G +L NS
Sbjct: 249 KTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGK---TLKQYTGHENSKYCIF 305
Query: 237 A-LSCDGSV-LYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAV--VSDLVCSG 292
A S G + SG+ D I +W + + +V L GHT+ +L V +++ SG
Sbjct: 306 ANFSVTGGKWIISGSEDCKIYIWNLQTRE----IVQCLEGHTQPVLASDCHPVQNIIASG 361
Query: 293 SA--DKTIRIWR 302
+ D I IWR
Sbjct: 362 ALEPDNKIHIWR 373
Score = 171 (65.3 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 55/225 (24%), Positives = 97/225 (43%)
Query: 136 CTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSD 195
CT H ++S+ + L + S D+T+KIW C ++T H +N +A S
Sbjct: 81 CTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTG-HKLGVNDIAWSS 139
Query: 196 DGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSI 254
D V + S DK +K++ + L+ HN+ + + S++ SG+ D S+
Sbjct: 140 DSRCVVSASDDKTLKIFEIVTSR----MTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESV 195
Query: 255 IVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIWRGIDRNYTCLA 312
+W+ + + + L H+ + ++ D L+ SGS D +RIW N C+
Sbjct: 196 RIWDVKTG----MCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWD--TANGQCIK 249
Query: 313 VLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQIS 357
L P N + Y++ S +LD +K+W S
Sbjct: 250 TLVDDENPPVAFVKFSPNGK-------YILAS-NLDSTLKLWDFS 286
Score = 143 (55.4 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 51/230 (22%), Positives = 96/230 (41%)
Query: 133 HKTC--TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINA 190
H C T H V+ +A + D + S S D+T+KI+ + +++ H++ +
Sbjct: 118 HMICERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTL-KGHNNYVFC 176
Query: 191 VALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGA 249
+ V +GS D+ +++W G + L H+ ++A++ + DGS++ SG+
Sbjct: 177 CNFNPQSSLVVSGSFDESVRIWDVKTG----MCIKTLPAHSDPVSAVSFNRDGSLIASGS 232
Query: 250 CDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD---LVCSGSADKTIRIWRGIDR 306
D + +W D N + L + S + + + D T+++W +
Sbjct: 233 YDGLVRIW----DTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLW-DFSK 287
Query: 307 NYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
T L GH C+ A S + SGS DC I +W +
Sbjct: 288 GKT-LKQYTGHENSKYCIFANF------SVTGGKWIISGSEDCKIYIWNL 330
Score = 132 (51.5 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 39/143 (27%), Positives = 67/143 (46%)
Query: 216 GNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGH 275
G+ + L+ LE H I++ S G L + + D+++ +W + +++ L GH
Sbjct: 73 GSANYKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMD----HMICERTLTGH 128
Query: 276 TKSILCMAVVSDLVC--SGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRC 333
+ +A SD C S S DKT++I+ + T L+GH V C C
Sbjct: 129 KLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMT--KTLKGHNNYVFC---------C 177
Query: 334 DSSDTSYLVCSGSLDCDIKVWQI 356
+ + S LV SGS D +++W +
Sbjct: 178 NFNPQSSLVVSGSFDESVRIWDV 200
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 204 (76.9 bits), Expect = 4.5e-14, P = 4.5e-14
Identities = 78/312 (25%), Positives = 141/312 (45%)
Query: 8 DHHCLTTLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSE--LDQEFLSNNNI 63
++ + TL+GH +SS + GK+L T S+D V+ W+ + E L L N+I
Sbjct: 76 NYKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDI 135
Query: 64 VAVGKGAVKSLVVLAD----KLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLG--DR 117
+ +V +D K+F + K +N + ++L G D
Sbjct: 136 AWSSDS--RCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDE 193
Query: 118 AIKLLMPKNHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCL 177
++++ K + I+ T H D VSA++ +D +L+ S S+D ++IW T++ +C+
Sbjct: 194 SVRIWDVKTGMCIK-----TLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCI 248
Query: 178 ESITNAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINAL 236
+++ + + + V S +G + + D +K+W S G +L NS
Sbjct: 249 KTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGK---TLKQYTGHENSKYCIF 305
Query: 237 A-LSCDGSV-LYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAV--VSDLVCSG 292
A S G + SG+ D I +W + + +V L GHT+ +L V +++ SG
Sbjct: 306 ANFSVTGGKWIISGSEDCKIYIWNLQTRE----IVQCLEGHTQPVLASDCHPVQNIIASG 361
Query: 293 SA--DKTIRIWR 302
+ D I IWR
Sbjct: 362 ALEPDNKIHIWR 373
Score = 171 (65.3 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 55/225 (24%), Positives = 97/225 (43%)
Query: 136 CTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSD 195
CT H ++S+ + L + S D+T+KIW C ++T H +N +A S
Sbjct: 81 CTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTG-HKLGVNDIAWSS 139
Query: 196 DGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSI 254
D V + S DK +K++ + L+ HN+ + + S++ SG+ D S+
Sbjct: 140 DSRCVVSASDDKTLKIFEIVTSR----MTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESV 195
Query: 255 IVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIWRGIDRNYTCLA 312
+W+ + + + L H+ + ++ D L+ SGS D +RIW N C+
Sbjct: 196 RIWDVKTG----MCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWD--TANGQCIK 249
Query: 313 VLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQIS 357
L P N + Y++ S +LD +K+W S
Sbjct: 250 TLVDDENPPVAFVKFSPNGK-------YILAS-NLDSTLKLWDFS 286
Score = 143 (55.4 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 51/230 (22%), Positives = 96/230 (41%)
Query: 133 HKTC--TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINA 190
H C T H V+ +A + D + S S D+T+KI+ + +++ H++ +
Sbjct: 118 HMICERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTL-KGHNNYVFC 176
Query: 191 VALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGA 249
+ V +GS D+ +++W G + L H+ ++A++ + DGS++ SG+
Sbjct: 177 CNFNPQSSLVVSGSFDESVRIWDVKTG----MCIKTLPAHSDPVSAVSFNRDGSLIASGS 232
Query: 250 CDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD---LVCSGSADKTIRIWRGIDR 306
D + +W D N + L + S + + + D T+++W +
Sbjct: 233 YDGLVRIW----DTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLW-DFSK 287
Query: 307 NYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
T L GH C+ A S + SGS DC I +W +
Sbjct: 288 GKT-LKQYTGHENSKYCIFANF------SVTGGKWIISGSEDCKIYIWNL 330
Score = 132 (51.5 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 39/143 (27%), Positives = 67/143 (46%)
Query: 216 GNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGH 275
G+ + L+ LE H I++ S G L + + D+++ +W + +++ L GH
Sbjct: 73 GSANYKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMD----HMICERTLTGH 128
Query: 276 TKSILCMAVVSDLVC--SGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRC 333
+ +A SD C S S DKT++I+ + T L+GH V C C
Sbjct: 129 KLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMT--KTLKGHNNYVFC---------C 177
Query: 334 DSSDTSYLVCSGSLDCDIKVWQI 356
+ + S LV SGS D +++W +
Sbjct: 178 NFNPQSSLVVSGSFDESVRIWDV 200
>UNIPROTKB|F1RFA9 [details] [associations]
symbol:TRAF7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008974
InterPro:IPR013323 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50145 PROSITE:PS50294 SMART:SM00184
SMART:SM00320 Pfam:PF00097 Prosite:PS00518 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0008270 InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 GeneTree:ENSGT00690000101849 CTD:84231 KO:K10646
OMA:ALCIQGN EMBL:FP102350 RefSeq:XP_003124781.1 UniGene:Ssc.21218
Ensembl:ENSSSCT00000008814 GeneID:100516964 KEGG:ssc:100516964
Uniprot:F1RFA9
Length = 670
Score = 209 (78.6 bits), Expect = 4.7e-14, P = 4.7e-14
Identities = 80/305 (26%), Positives = 143/305 (46%)
Query: 11 CLTTLKGHNSYVSSLAL--AGKFLYTGSSDNEVRSWD-CNTFSSELDQEFLSNNNIVAVG 67
C T GH V L + G L++GSSD ++ WD C T+ Q+ L ++
Sbjct: 388 CKGTFVGHQGPVWCLCVYSVGDLLFSGSSDKTIKVWDTCTTYKC---QKTLEGHD----- 439
Query: 68 KGAVKSLVVLADKLFSAHQDHKIRVWKINNQEP-------DHQKYTRLATLPTLGDRAIK 120
G V +L + +L+S D I VW I N + D+ T +++ L ++K
Sbjct: 440 -GIVLALCIQGCRLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNLLFSGSLK 498
Query: 121 LLMPKNHV--QIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLE 178
+ + V +++ K T ++H V AL ++ LYS S+ +TIKIW C+
Sbjct: 499 AIKVWDIVGTELKLKKELTGLNHW--VRALVAA--QSYLYSGSY-QTIKIWDIRTLDCIH 553
Query: 179 SITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALAL 238
+ ++ ++A+++ + G+ + I VW +K+ V L H + ALA+
Sbjct: 554 -VLQTSGGSVYSIAVTNH-HIVCGTYENLIHVWDIE--SKEQ--VRTLTGHVGTVYALAV 607
Query: 239 --SCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADK 296
+ D + ++S + DRS+ VW + N++ L H S+ +AV + SG+ D
Sbjct: 608 ISTPDQTKVFSASYDRSLRVWSMD----NMICTQTLLRHQGSVTALAVSRGRLFSGAVDS 663
Query: 297 TIRIW 301
T+++W
Sbjct: 664 TVKVW 668
Score = 162 (62.1 bits), Expect = 9.6e-09, P = 9.6e-09
Identities = 60/184 (32%), Positives = 84/184 (45%)
Query: 174 FKCLESITNAHDDAINAVALSDDGDV-YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSG 232
FKC + H + + + GD+ ++GS+DK IKVW K LE H+ G
Sbjct: 386 FKCKGTFVG-HQGPVWCLCVYSVGDLLFSGSSDKTIKVWDTCTTYKCQK---TLEGHD-G 440
Query: 233 INALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSG 292
I LAL G LYSG+ D +IIVW+ + N+ V +R H + + +L+ SG
Sbjct: 441 I-VLALCIQGCRLYSGSADCTIIVWDIQ----NLQKVNTIRAHDNPVCTLVSSHNLLFSG 495
Query: 293 SADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIK 352
S K I++W + L G V+ L AA SYL SGS IK
Sbjct: 496 SL-KAIKVWDIVGTELKLKKELTGLNHWVRALVAA----------QSYLY-SGSYQT-IK 542
Query: 353 VWQI 356
+W I
Sbjct: 543 IWDI 546
Score = 151 (58.2 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 56/190 (29%), Positives = 94/190 (49%)
Query: 137 TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRT-SDFKCLESITNAHDDAINAVALSD 195
T+V H V L + LL+S S D+TIK+W T + +KC +++ HD + A+ +
Sbjct: 391 TFVGHQGPVWCLCVYSVGDLLFSGSSDKTIKVWDTCTTYKCQKTL-EGHDGIVLALCIQG 449
Query: 196 DGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSII 255
+Y+GSAD I VW K V+ + H++ + L S ++L+SG+ ++I
Sbjct: 450 CR-LYSGSADCTIIVWDIQNLQK----VNTIRAHDNPVCTLVSS--HNLLFSGSL-KAIK 501
Query: 256 VWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLE 315
VW+ + + + L G + + + SGS +TI+IW I R C+ VL+
Sbjct: 502 VWDIVGTE--LKLKKELTGLNHWVRALVAAQSYLYSGSY-QTIKIW-DI-RTLDCIHVLQ 556
Query: 316 GHRGPVKCLA 325
G V +A
Sbjct: 557 TSGGSVYSIA 566
Score = 148 (57.2 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 67/257 (26%), Positives = 107/257 (41%)
Query: 9 HHCLTTLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGK 68
+ C TL+GH+ V +L + G LY+GS+D + WD L N +
Sbjct: 429 YKCQKTLEGHDGIVLALCIQGCRLYSGSADCTIIVWDIQN---------LQKVNTIRAHD 479
Query: 69 GAVKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQK-YTRLATLPTLGDRAIKLLMPKNH 127
V +LV + LFS I+VW I E +K T L A L ++
Sbjct: 480 NPVCTLVSSHNLLFSGSLK-AIKVWDIVGTELKLKKELTGLNHWVRALVAAQSYLYSGSY 538
Query: 128 VQIR----RHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA 183
I+ R C V S ++ + +++ I +W + + ++T
Sbjct: 539 QTIKIWDIRTLDCIHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQVRTLTG- 597
Query: 184 HDDAINAVAL---SDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSC 240
H + A+A+ D V++ S D+ ++VW S N L RH + ALA+S
Sbjct: 598 HVGTVYALAVISTPDQTKVFSASYDRSLRVW--SMDNM--ICTQTLLRHQGSVTALAVS- 652
Query: 241 DGSVLYSGACDRSIIVW 257
G L+SGA D ++ VW
Sbjct: 653 RGR-LFSGAVDSTVKVW 668
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 203 (76.5 bits), Expect = 5.0e-14, P = 5.0e-14
Identities = 76/317 (23%), Positives = 146/317 (46%)
Query: 3 NLSVVDHHCLT-TLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSELDQEFLS 59
+LSV ++ L TL GH VS++ + G++L + S+D ++ W + + ++ +S
Sbjct: 55 SLSVKPNYTLKFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIW--GAYDGKFEKT-IS 111
Query: 60 NNNIVAVGKGAVKSLVVLADKLFSAHQDHKIRVWKINNQEP-----DHQKYTRLATLPTL 114
+ + + A S L L S D ++VW+++ + H Y
Sbjct: 112 GHKL-GISDVAWSSDSRL---LVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQ 167
Query: 115 GDRAIKLLMPKNHVQIRRHKT--C--TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWR 170
+ + ++ V+I +T C T H D VSA+ +D +L+ S S+D +IW
Sbjct: 168 SNLIVSGSFDES-VRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 226
Query: 171 TSDFKCLESITNAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERH 229
T+ +CL+++ + + ++ V S +G + + D +K+W S G + +
Sbjct: 227 TASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGH-KNE 285
Query: 230 NSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAV--VSD 287
I A G + SG+ D + +W + + VV L+GHT ++LC A +
Sbjct: 286 KYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKE----VVQKLQGHTDTVLCTACHPTEN 341
Query: 288 LVCSGSA--DKTIRIWR 302
++ S + DKTI++W+
Sbjct: 342 IIASAALENDKTIKLWK 358
Score = 162 (62.1 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 64/238 (26%), Positives = 102/238 (42%)
Query: 125 KNHVQIRRHKTC--TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITN 182
K+ + ++ + T T H AVSA+ + + L S S D+ IKIW D K E +
Sbjct: 53 KSSLSVKPNYTLKFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGK-FEKTIS 111
Query: 183 AHDDAINAVALSDDGDVY-TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCD 241
H I+ VA S D + +GS DK +KVW S G + L+ H++ + +
Sbjct: 112 GHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKS----LKTLKGHSNYVFCCNFNPQ 167
Query: 242 GSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIR 299
+++ SG+ D S+ +W+ G L L H+ + + D L+ S S D R
Sbjct: 168 SNLIVSGSFDESVRIWDVRT--GKCLKT--LPAHSDPVSAVHFNRDGSLIVSSSYDGLCR 223
Query: 300 IWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQIS 357
IW CL L P N + Y++ + +LD +K+W S
Sbjct: 224 IWDTASGQ--CLKTLIDDDNPPVSFVKFSPNGK-------YILAA-TLDNTLKLWDYS 271
Score = 143 (55.4 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 46/217 (21%), Positives = 95/217 (43%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD-V 199
H +S +A + D LL S S D+T+K+W S K L+++ H + + + + +
Sbjct: 113 HKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTL-KGHSNYVFCCNFNPQSNLI 171
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEK 259
+GS D+ +++W G + L H+ ++A+ + DGS++ S + D +W+
Sbjct: 172 VSGSFDESVRIWDVRTGK----CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 227
Query: 260 EEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRG 319
++ S + + + + + D T+++W + CL GH+
Sbjct: 228 ASGQCLKTLIDD-DNPPVSFVKFSPNGKYILAATLDNTLKLW-DYSKG-KCLKTYTGHKN 284
Query: 320 PVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
C+ A + ++V SGS D + +W +
Sbjct: 285 EKYCIFANFS-----VTGGKWIV-SGSEDNMVYIWNL 315
>MGI|MGI:1346998 [details] [associations]
symbol:Ciao1 "cytosolic iron-sulfur protein assembly 1"
species:10090 "Mus musculus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0007059 "chromosome segregation" evidence=IEA]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISO]
[GO:0071817 "MMXD complex" evidence=ISO] [GO:0097361 "CIA complex"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1346998 GO:GO:0007059 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0003700 GO:GO:0006357 GO:GO:0016226 GO:GO:0071817 HSSP:P16649
HOGENOM:HOG000208901 OMA:SWKCVCT CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 ChiTaRS:CIAO1 EMBL:AK002314 EMBL:AK028376
EMBL:AL845368 EMBL:BC004089 IPI:IPI00320161 RefSeq:NP_079572.2
UniGene:Mm.45179 ProteinModelPortal:Q99KN2 SMR:Q99KN2 IntAct:Q99KN2
STRING:Q99KN2 PhosphoSite:Q99KN2 PaxDb:Q99KN2 PRIDE:Q99KN2
Ensembl:ENSMUST00000003759 GeneID:26371 KEGG:mmu:26371
UCSC:uc008mfb.2 InParanoid:Q99KN2 NextBio:304265 Bgee:Q99KN2
Genevestigator:Q99KN2 Uniprot:Q99KN2
Length = 339
Score = 201 (75.8 bits), Expect = 6.5e-14, P = 6.5e-14
Identities = 61/218 (27%), Positives = 102/218 (46%)
Query: 148 LALTKDETLLYSVSWDRTIKIWRTS--DFKCLESITNAHDDAINAVALSDDGDVYTGSA- 204
LA TLL S DR I+IW T + C ++ H + VA S G+ Y SA
Sbjct: 22 LAWNPSGTLLASCGGDRKIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGN-YLASAS 80
Query: 205 -DKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDD 263
D +W+++ + V LE H + + ++A + G++L + + D+S+ VWE +E+D
Sbjct: 81 FDATTCIWKKNQDD--FECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEED 138
Query: 264 GNILVVGALRGHTKSI--LCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPV 321
V L HT+ + + +L+ S S D T+++++ ++ C A LEGH V
Sbjct: 139 -EYECVSVLSSHTQDVKHVVWHPSQELLASASYDDTVKLYQEEGDDWVCCATLEGHESTV 197
Query: 322 KCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQISFP 359
+A D S CS D +++W+ P
Sbjct: 198 WSIAF-------DPSGQRLASCSD--DRTVRIWRQYLP 226
Score = 141 (54.7 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 57/207 (27%), Positives = 94/207 (45%)
Query: 173 DFKCLESITNAHDDA-INAVALSDDGDVYTG-SADKKIKVWRRSPGNKKHSLV--DVL-E 227
D L+S AH D+ +A + G + D+KI++W G + S + VL E
Sbjct: 3 DSLVLQSRVPAHPDSRCWFLAWNPSGTLLASCGGDRKIRIW----GTEGDSWICKSVLSE 58
Query: 228 RHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSI--LCMAVV 285
H + +A S G+ L S + D + +W+K +DD V L GH + + A
Sbjct: 59 GHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFEC--VTTLEGHENEVKSVAWAPS 116
Query: 286 SDLVCSGSADKTIRIWRGIDRN--YTCLAVLEGHRGPVK---------CLAAAIDND--R 332
+L+ + S DK++ +W +D Y C++VL H VK LA+A +D +
Sbjct: 117 GNLLATCSRDKSVWVWE-VDEEDEYECVSVLSSHTQDVKHVVWHPSQELLASASYDDTVK 175
Query: 333 CDSSDTSYLVCSGSLDC-DIKVWQISF 358
+ VC +L+ + VW I+F
Sbjct: 176 LYQEEGDDWVCCATLEGHESTVWSIAF 202
>RGD|1307285 [details] [associations]
symbol:Ciao1 "cytosolic iron-sulfur protein assembly 1"
species:10116 "Rattus norvegicus" [GO:0007059 "chromosome
segregation" evidence=IEA] [GO:0016226 "iron-sulfur cluster
assembly" evidence=ISO;ISS] [GO:0071817 "MMXD complex"
evidence=ISO;ISS] [GO:0097361 "CIA complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1307285 GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226
GO:GO:0071817 HSSP:P16649 HOGENOM:HOG000208901 OMA:SWKCVCT CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:BC088474 IPI:IPI00194647 RefSeq:NP_001008766.1
UniGene:Rn.108832 ProteinModelPortal:Q5M7T1 STRING:Q5M7T1
PRIDE:Q5M7T1 Ensembl:ENSRNOT00000017603 GeneID:29231 KEGG:rno:29231
UCSC:RGD:1307285 InParanoid:Q5M7T1 NextBio:608478
Genevestigator:Q5M7T1 Uniprot:Q5M7T1
Length = 339
Score = 201 (75.8 bits), Expect = 6.5e-14, P = 6.5e-14
Identities = 61/218 (27%), Positives = 102/218 (46%)
Query: 148 LALTKDETLLYSVSWDRTIKIWRTS--DFKCLESITNAHDDAINAVALSDDGDVYTGSA- 204
LA TLL S DR I+IW T + C ++ H + VA S G+ Y SA
Sbjct: 22 LAWNPTGTLLASCGGDRKIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGN-YLASAS 80
Query: 205 -DKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDD 263
D +W+++ + V LE H + + ++A + G++L + + D+S+ VWE +E+D
Sbjct: 81 FDATTCIWKKNQDD--FECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEED 138
Query: 264 GNILVVGALRGHTKSI--LCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPV 321
V L HT+ + + +L+ S S D T+++++ ++ C A LEGH V
Sbjct: 139 -EYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYQEEGDDWVCCATLEGHESTV 197
Query: 322 KCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQISFP 359
+A D S CS D +++W+ P
Sbjct: 198 WSIAF-------DPSGQRLASCSD--DRTVRIWRQYLP 226
Score = 140 (54.3 bits), Expect = 8.3e-07, P = 8.3e-07
Identities = 57/207 (27%), Positives = 94/207 (45%)
Query: 173 DFKCLESITNAHDDA-INAVALSDDGDVYTG-SADKKIKVWRRSPGNKKHSLV--DVL-E 227
D L+S AH D+ +A + G + D+KI++W G + S + VL E
Sbjct: 3 DALVLQSRVPAHPDSRCWFLAWNPTGTLLASCGGDRKIRIW----GTEGDSWICKSVLSE 58
Query: 228 RHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSI--LCMAVV 285
H + +A S G+ L S + D + +W+K +DD V L GH + + A
Sbjct: 59 GHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFEC--VTTLEGHENEVKSVAWAPS 116
Query: 286 SDLVCSGSADKTIRIWRGIDRN--YTCLAVLEGHRGPVK---------CLAAAIDND--R 332
+L+ + S DK++ +W +D Y C++VL H VK LA+A +D +
Sbjct: 117 GNLLATCSRDKSVWVWE-VDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVK 175
Query: 333 CDSSDTSYLVCSGSLDC-DIKVWQISF 358
+ VC +L+ + VW I+F
Sbjct: 176 LYQEEGDDWVCCATLEGHESTVWSIAF 202
>UNIPROTKB|F1P0J6 [details] [associations]
symbol:TRAF7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008974
InterPro:IPR013323 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50145 PROSITE:PS50294 SMART:SM00184
SMART:SM00320 Pfam:PF00097 Prosite:PS00518 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0008270 InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 GeneTree:ENSGT00690000101849 EMBL:AADN02023658
EMBL:AADN02023655 EMBL:AADN02023656 EMBL:AADN02023657
IPI:IPI00822582 Ensembl:ENSGALT00000040411 ArrayExpress:F1P0J6
Uniprot:F1P0J6
Length = 660
Score = 207 (77.9 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 79/304 (25%), Positives = 142/304 (46%)
Query: 11 CLTTLKGHNSYVSSLAL--AGKFLYTGSSDNEVRSWD-CNTFSSELDQEFLSNNNIVAVG 67
C T GH V L + G L++GSSD ++ WD C T+ Q+ L ++
Sbjct: 378 CKGTFVGHQGPVWCLCVYSIGDLLFSGSSDKTIKVWDTCTTYKC---QKTLEGHD----- 429
Query: 68 KGAVKSLVVLADKLFSAHQDHKIRVWKINNQEP-------DHQKYTRLATLPTLGDRAIK 120
G V +L + +KL+S D I VW I N + D+ T +++ L ++K
Sbjct: 430 -GIVLALCIQGNKLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNMLFSGSLK 488
Query: 121 LLMPKNHV--QIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLE 178
+ + V +++ K T ++H AL + LYS S+ +TIKIW + +C+
Sbjct: 489 AIKVWDIVGTELKLKKELTGLNHW----VRALVASQNYLYSGSY-QTIKIWDIRNLECVH 543
Query: 179 SITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALAL 238
+ ++ ++A+++ + G+ + I VW K+ V L H + ALA+
Sbjct: 544 -VLQTSGGSVYSIAVTNH-HIVCGTYENLIHVWDIE--TKEQ--VRTLTGHVGTVYALAV 597
Query: 239 --SCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADK 296
+ D + ++S + DRS+ VW + N++ L H S+ +AV + SG+ D
Sbjct: 598 ISTPDQTKVFSASYDRSLRVWSMD----NMICTQTLLRHQGSVTALAVSRGRLFSGAVDS 653
Query: 297 TIRI 300
T+++
Sbjct: 654 TVKV 657
Score = 160 (61.4 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 57/190 (30%), Positives = 97/190 (51%)
Query: 137 TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRT-SDFKCLESITNAHDDAINAVALSD 195
T+V H V L + LL+S S D+TIK+W T + +KC +++ HD + A+ +
Sbjct: 381 TFVGHQGPVWCLCVYSIGDLLFSGSSDKTIKVWDTCTTYKCQKTL-EGHDGIVLALCIQG 439
Query: 196 DGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSII 255
+ +Y+GSAD I VW K V+ + H++ + L S ++L+SG+ ++I
Sbjct: 440 N-KLYSGSADCTIIVWDIQNLQK----VNTIRAHDNPVCTLVSS--HNMLFSGSL-KAIK 491
Query: 256 VWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLE 315
VW+ + + + L G + + + + SGS +TI+IW I RN C+ VL+
Sbjct: 492 VWDIVGTE--LKLKKELTGLNHWVRALVASQNYLYSGSY-QTIKIW-DI-RNLECVHVLQ 546
Query: 316 GHRGPVKCLA 325
G V +A
Sbjct: 547 TSGGSVYSIA 556
Score = 144 (55.7 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 66/261 (25%), Positives = 112/261 (42%)
Query: 9 HHCLTTLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGK 68
+ C TL+GH+ V +L + G LY+GS+D + WD L N +
Sbjct: 419 YKCQKTLEGHDGIVLALCIQGNKLYSGSADCTIIVWDIQN---------LQKVNTIRAHD 469
Query: 69 GAVKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLGDRAIKLLMPKNHV 128
V +LV + LFS I+VW I E +K L L L+ +N++
Sbjct: 470 NPVCTLVSSHNMLFSGSLK-AIKVWDIVGTELKLKK-----ELTGLNHWVRALVASQNYL 523
Query: 129 QIRRHKTCT-W-VHHVDAVSALALTKDETLLYSVS--------WDRTIKIWRTSDFKCLE 178
++T W + +++ V L + +V+ ++ I +W + +
Sbjct: 524 YSGSYQTIKIWDIRNLECVHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDIETKEQVR 583
Query: 179 SITNAHDDAINAVAL---SDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINA 235
++T H + A+A+ D V++ S D+ ++VW S N L RH + A
Sbjct: 584 TLTG-HVGTVYALAVISTPDQTKVFSASYDRSLRVW--SMDNM--ICTQTLLRHQGSVTA 638
Query: 236 LALSCDGSVLYSGACDRSIIV 256
LA+S G L+SGA D ++ V
Sbjct: 639 LAVS-RGR-LFSGAVDSTVKV 657
Score = 137 (53.3 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 60/211 (28%), Positives = 95/211 (45%)
Query: 148 LALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSADKK 207
LAL LYS S D TI +W + + + +I AHD+ + +S +++GS K
Sbjct: 433 LALCIQGNKLYSGSADCTIIVWDIQNLQKVNTI-RAHDNPV-CTLVSSHNMLFSGSL-KA 489
Query: 208 IKVWRRSPGNKKHSLVDVLERHNSGIN--ALALSCDGSVLYSGACDRSIIVWEKEEDDGN 265
IKVW K L++ +G+N AL + LYSG+ ++I +W D N
Sbjct: 490 IKVWDIVGTELK------LKKELTGLNHWVRALVASQNYLYSGSY-QTIKIW----DIRN 538
Query: 266 ILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLA 325
+ V L+ S+ +AV + + G+ + I +W I+ + L GH G V LA
Sbjct: 539 LECVHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVW-DIETKEQ-VRTLTGHVGTVYALA 596
Query: 326 AAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
D+ V S S D ++VW +
Sbjct: 597 VISTPDQTK-------VFSASYDRSLRVWSM 620
Score = 130 (50.8 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 36/89 (40%), Positives = 43/89 (48%)
Query: 270 GALRGHTKSILCMAVVS--DLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAA 327
G GH + C+ V S DL+ SGS+DKTI++W Y C LEGH G V L
Sbjct: 380 GTFVGHQGPVWCLCVYSIGDLLFSGSSDKTIKVWDTCT-TYKCQKTLEGHDGIVLAL--- 435
Query: 328 IDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
C + Y SGS DC I VW I
Sbjct: 436 -----CIQGNKLY---SGSADCTIIVWDI 456
Score = 126 (49.4 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 71/283 (25%), Positives = 120/283 (42%)
Query: 66 VG-KGAVKSLVV--LADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLGDRAIKLL 122
VG +G V L V + D LFS D I+VW Y TL + L
Sbjct: 383 VGHQGPVWCLCVYSIGDLLFSGSSDKTIKVWDTCTT------YKCQKTLEGHDGIVLALC 436
Query: 123 MPKNHVQIRRHKTCT---W-VHHVDAVSAL--------ALTKDETLLYSVSWDRTIKIWR 170
+ N + CT W + ++ V+ + L +L+S S + IK+W
Sbjct: 437 IQGNKLY-SGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNMLFSGSL-KAIKVWD 494
Query: 171 T--SDFKCLESITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLER 228
++ K + +T + + A+ S + +Y+GS + IK+W + V VL+
Sbjct: 495 IVGTELKLKKELTGLNH-WVRALVASQNY-LYSGSY-QTIKIW----DIRNLECVHVLQT 547
Query: 229 HNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD- 287
+ ++A++ + G + I VW+ E + V L GH ++ +AV+S
Sbjct: 548 SGGSVYSIAVT--NHHIVCGTYENLIHVWDIETKEQ----VRTLTGHVGTVYALAVISTP 601
Query: 288 ---LVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAA 327
V S S D+++R+W +D N C L H+G V LA +
Sbjct: 602 DQTKVFSASYDRSLRVW-SMD-NMICTQTLLRHQGSVTALAVS 642
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 203 (76.5 bits), Expect = 8.1e-14, P = 8.1e-14
Identities = 80/307 (26%), Positives = 131/307 (42%)
Query: 12 LTTLKGHNSYVSSLALAGKF---LYTGSSDNEVRSWDCNTFSSELDQEFLSNN-NIVAVG 67
L TL+GH + V ++A + + TGS D + W T + F + IV +
Sbjct: 127 LHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVET--GKCYHTFRGHTAEIVCLS 184
Query: 68 KGAVKSLVVLADKLFSAHQDHKIRVWKINNQEP-----DHQKYTRLATLPTLGDRAIKLL 122
+LV + D ++W I + E H + T G+R I
Sbjct: 185 FNPQSTLVA------TGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGS 238
Query: 123 MPKNHVQIRR----HKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLE 178
V + K T + H +S+ D +L+ + S D+T K+W + KC+
Sbjct: 239 FDHT-VTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVA 297
Query: 179 SITNAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALA 237
++T HDD I G + T SAD +++ S ++ V LE H I+ ++
Sbjct: 298 TLTG-HDDEILDSCFDYTGKLIATASADGTARIF--SAATRE--CVTKLEGHEGEISKIS 352
Query: 238 LSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAV--VSDLVCSGSAD 295
+ G+ L +G+ D++ +W+ + G L V L GHT I A D++ +GS D
Sbjct: 353 FNPQGNRLLTGSSDKTARIWDAQT--GQCLQV--LEGHTDEIFSCAFNYKGDIIITGSKD 408
Query: 296 KTIRIWR 302
T RIWR
Sbjct: 409 NTCRIWR 415
Score = 190 (71.9 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 53/188 (28%), Positives = 89/188 (47%)
Query: 137 TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDD 196
T+ H + L+ TL+ + S D T K+W + + ++T H I +++ +
Sbjct: 172 TFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTG-HSAEIISLSFNTS 230
Query: 197 GD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSII 255
G+ + TGS D + VW G K ++L+ H + I++ + D S++ +G+ D++
Sbjct: 231 GNRIITGSFDHTVTVWEADTGRKVYTLIG----HCAEISSAVFNWDCSLILTGSMDKTCK 286
Query: 256 VWEKEEDDGNILVVGALRGHTKSIL--CMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAV 313
+W D N V L GH IL C L+ + SAD T RI+ R C+
Sbjct: 287 LW----DAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRE--CVTK 340
Query: 314 LEGHRGPV 321
LEGH G +
Sbjct: 341 LEGHEGEI 348
Score = 177 (67.4 bits), Expect = 8.3e-11, P = 8.3e-11
Identities = 54/218 (24%), Positives = 106/218 (48%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDD-GD- 198
H+ ++ +AL K + + S+DRT K+W T+ + L ++ H + + A+A ++ GD
Sbjct: 91 HILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTL-EGHRNVVYAIAFNNPYGDK 149
Query: 199 VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWE 258
+ TGS DK K+W G H+ H + I L+ + +++ +G+ D + +W+
Sbjct: 150 IATGSFDKTCKLWSVETGKCYHTF----RGHTAEIVCLSFNPQSTLVATGSMDTTAKLWD 205
Query: 259 KEEDDGNILVVGALRGHTKSILCMA--VVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEG 316
+ + V L GH+ I+ ++ + + +GS D T+ +W D ++ G
Sbjct: 206 IQSGEE----VFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEA-DTGRKVYTLI-G 259
Query: 317 HRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVW 354
H + ++A+ N C L+ +GS+D K+W
Sbjct: 260 HCAEI---SSAVFNWDCS------LILTGSMDKTCKLW 288
Score = 175 (66.7 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 73/283 (25%), Positives = 119/283 (42%)
Query: 45 DCNTFSSELDQEFLSNNNIVAVGKG-AVKSLVVLADKLFSAHQDHKIRVWKINNQE--P- 100
D +T S L +E ++ + VK L+ H +HK ++K+ P
Sbjct: 36 DPSTDVSALVEEIQKAEPLITASRSDQVKLLIQRLQNKLGQHSNHKFYLFKVLRAHILPL 95
Query: 101 DHQKYTRLATLPTLG--DRAIKLLMPKNHVQIRRHKTCTWVHHVDAVSALALTKDE-TLL 157
+ + + G DR KL + ++ H T H + V A+A +
Sbjct: 96 TNVALNKSGSCFITGSYDRTCKLWDTASGEEL--H---TLEGHRNVVYAIAFNNPYGDKI 150
Query: 158 YSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPG 216
+ S+D+T K+W KC + H I ++ + V TGS D K+W G
Sbjct: 151 ATGSFDKTCKLWSVETGKCYHTF-RGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSG 209
Query: 217 NKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHT 276
+ V L H++ I +L+ + G+ + +G+ D ++ VWE D G V L GH
Sbjct: 210 EE----VFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEA--DTGR--KVYTLIGHC 261
Query: 277 KSILCMAVVSD--LVCSGSADKTIRIWRGIDRNYTCLAVLEGH 317
I D L+ +GS DKT ++W + N C+A L GH
Sbjct: 262 AEISSAVFNWDCSLILTGSMDKTCKLWDAV--NGKCVATLTGH 302
Score = 153 (58.9 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 54/194 (27%), Positives = 89/194 (45%)
Query: 167 KIWRTSDFKC-LESITNAHDDAINAVALSDDGDVY-TGSADKKIKVWRRSPGNKKHSLVD 224
K+ + S+ K L + AH + VAL+ G + TGS D+ K+W + G + H+L
Sbjct: 73 KLGQHSNHKFYLFKVLRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTL-- 130
Query: 225 VLERHNSGINALALSCD-GSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMA 283
E H + + A+A + G + +G+ D++ +W E G RGHT I+C++
Sbjct: 131 --EGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVET--GKCY--HTFRGHTAEIVCLS 184
Query: 284 V--VSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYL 341
S LV +GS D T ++W I L GH + L+ +R
Sbjct: 185 FNPQSTLVATGSMDTTAKLW-DIQSGEEVFT-LTGHSAEIISLSFNTSGNR--------- 233
Query: 342 VCSGSLDCDIKVWQ 355
+ +GS D + VW+
Sbjct: 234 IITGSFDHTVTVWE 247
Score = 131 (51.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 39/143 (27%), Positives = 63/143 (44%)
Query: 217 NKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHT 276
N K L VL H + +AL+ GS +G+ DR+ +W+ + + L GH
Sbjct: 79 NHKFYLFKVLRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEE----LHTLEGHR 134
Query: 277 KSILCMAV---VSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRC 333
+ +A D + +GS DKT ++W ++ C GH + CL+
Sbjct: 135 NVVYAIAFNNPYGDKIATGSFDKTCKLW-SVETG-KCYHTFRGHTAEIVCLSF------- 185
Query: 334 DSSDTSYLVCSGSLDCDIKVWQI 356
+ S LV +GS+D K+W I
Sbjct: 186 --NPQSTLVATGSMDTTAKLWDI 206
>UNIPROTKB|F1NM37 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AADN02023671 EMBL:AADN02023670 IPI:IPI00583117
Ensembl:ENSGALT00000008918 Uniprot:F1NM37
Length = 812
Score = 177 (67.4 bits), Expect = 9.3e-14, Sum P(2) = 9.3e-14
Identities = 67/236 (28%), Positives = 119/236 (50%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTS-DFK--CL-ESITNAHDDAINAVALS-- 194
H + + AL + + + S + D++I++WR + D + C+ + + +AH + AV+ S
Sbjct: 385 HTETILALDVFRKGLMFVSCAKDKSIRVWRMNKDGRVVCVAQGLGHAH--GVGAVSCSRL 442
Query: 195 DDGDVYTGSADKKIKVWR--RSPGNK-KHSLVD--------VLER-HNSGINALALSCDG 242
+ V T S D IKVW S +K K +L+ + ER H+ IN++A+S +
Sbjct: 443 KESFVVTSSQDCTIKVWNIPESLTSKAKAALISGPETLHAQMTERGHDKDINSVAVSPND 502
Query: 243 SVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCM--AVVSDLVCSGSADKTIRI 300
++ +G+ DR +W D ++L G GH + I C+ + V ++ + SAD T+++
Sbjct: 503 KLIATGSQDRLAKLWSCP--DCSLL--GVFTGHKRGIWCVQFSPVDQILATSSADGTLKL 558
Query: 301 WRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
W G+ ++++CL EGH V + S T L SG D +K+W I
Sbjct: 559 W-GL-QDFSCLKTFEGHDASVLKIIFV-------SRGTQLL--SGGSDGLLKLWTI 603
Score = 139 (54.0 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 46/175 (26%), Positives = 79/175 (45%)
Query: 133 HKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVA 192
H T H ++++A++ ++ L+ + S DR K+W D L T H I V
Sbjct: 481 HAQMTERGHDKDINSVAVSPNDKLIATGSQDRLAKLWSCPDCSLLGVFTG-HKRGIWCVQ 539
Query: 193 LSD-DGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACD 251
S D + T SAD +K+W G + S + E H++ + + G+ L SG D
Sbjct: 540 FSPVDQILATSSADGTLKLW----GLQDFSCLKTFEGHDASVLKIIFVSRGTQLLSGGSD 595
Query: 252 RSIIVWEKEEDDGNILVVGALRGHTKSI--LCMAVVSDLVCSGSADKTIRIWRGI 304
+ +W + ++ V L GH I L D+V + S+D +I +W+ +
Sbjct: 596 GLLKLWTIKTNE----CVKTLDGHEDKIWGLHTNKQDDMVVTASSDSSITLWKDV 646
Score = 130 (50.8 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 37/132 (28%), Positives = 59/132 (44%)
Query: 132 RHKTC--TW-VHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAI 188
R C TW H+ V+ + TLL + D TIKIW C ++ + +
Sbjct: 97 RENRCVRTWKAVHIAPVATMVFDSTSTLLATGGCDSTIKIWDMIKQYCTHNLKGS-SGVV 155
Query: 189 NAVALSDDGD---VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVL 245
+ V D +++ S D KI++W + V VL+ H S + +LA + DG+ L
Sbjct: 156 HLVEFHPDISRLQLFSSSMDYKIRIWDLNSSK----CVAVLDGHFSAVTSLAFTADGNTL 211
Query: 246 YSGACDRSIIVW 257
S D+ +VW
Sbjct: 212 ISSGRDKICMVW 223
Score = 117 (46.2 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 40/176 (22%), Positives = 78/176 (44%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDG-DV 199
H + + + + +L + S D T+K+W DF CL++ HD ++ + G +
Sbjct: 531 HKRGIWCVQFSPVDQILATSSADGTLKLWGLQDFSCLKTF-EGHDASVLKIIFVSRGTQL 589
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEK 259
+G +D +K+W K + V L+ H I L + ++ + + D SI +W+
Sbjct: 590 LSGGSDGLLKLWTI----KTNECVKTLDGHEDKIWGLHTNKQDDMVVTASSDSSITLWK- 644
Query: 260 EEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLE 315
D I A + I+ +S+L+ K + + +DR +T L V++
Sbjct: 645 --DVTEIEQEEAQAKREEQIMKEQELSNLLHEKRYLKALGLAISLDRPHTVLTVIK 698
Score = 115 (45.5 bits), Expect = 8.5e-07, Sum P(2) = 8.5e-07
Identities = 50/215 (23%), Positives = 89/215 (41%)
Query: 150 LTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSD-DGDVYTGSADKKI 208
L + + +VS + I + + + + +D+ ++ L D + + ++
Sbjct: 310 LVPERNEIVTVSVEHNIVFYDAQTLQLRKQLAGYNDEVLDVKFLGPGDSHIVVATNSPQL 369
Query: 209 KVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILV 268
KV+ S + +L H I AL + G + S A D+SI VW +D G ++
Sbjct: 370 KVFELSTSH-----CQILYGHTETILALDVFRKGLMFVSCAKDKSIRVWRMNKD-GRVVC 423
Query: 269 VGALRGHTK---SILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLA 325
V GH ++ C + V + S D TI++W I + T A GP A
Sbjct: 424 VAQGLGHAHGVGAVSCSRLKESFVVTSSQDCTIKVWN-IPESLTSKAKAALISGPETLHA 482
Query: 326 AAID--NDR-CDS---SDTSYLVCSGSLDCDIKVW 354
+ +D+ +S S L+ +GS D K+W
Sbjct: 483 QMTERGHDKDINSVAVSPNDKLIATGSQDRLAKLW 517
Score = 77 (32.2 bits), Expect = 9.3e-14, Sum P(2) = 9.3e-14
Identities = 26/100 (26%), Positives = 49/100 (49%)
Query: 8 DHHCLTTLKG-HNSYVSSLAL--AGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIV 64
++ C+ T K H + V+++ L TG D+ ++ WD + +++ ++N
Sbjct: 98 ENRCVRTWKAVHIAPVATMVFDSTSTLLATGGCDSTIKIWD-------MIKQYCTHN--- 147
Query: 65 AVGKGAVKSLVVL-AD----KLFSAHQDHKIRVWKINNQE 99
G V LV D +LFS+ D+KIR+W +N+ +
Sbjct: 148 LKGSSGVVHLVEFHPDISRLQLFSSSMDYKIRIWDLNSSK 187
Score = 67 (28.6 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 10 HCLTTLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDC 46
H T +GH+ ++S+A++ K + TGS D + W C
Sbjct: 481 HAQMTERGHDKDINSVAVSPNDKLIATGSQDRLAKLWSC 519
Score = 55 (24.4 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 15/43 (34%), Positives = 19/43 (44%)
Query: 11 CLTTLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSS 51
C+ L GH S V+SLA G L + D W+ T S
Sbjct: 188 CVAVLDGHFSAVTSLAFTADGNTLISSGRDKICMVWNLKTRES 230
Score = 53 (23.7 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 22/88 (25%), Positives = 36/88 (40%)
Query: 10 HCLTTLKGHNSYVSSLAL--AGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVG 67
HC L GH + +L + G + + D +R W N + ++ A G
Sbjct: 378 HC-QILYGHTETILALDVFRKGLMFVSCAKDKSIRVWRMNKDGRVV---CVAQGLGHAHG 433
Query: 68 KGAVKSLVVLADKLFSAHQDHKIRVWKI 95
GAV + + ++ QD I+VW I
Sbjct: 434 VGAVSCSRLKESFVVTSSQDCTIKVWNI 461
>UNIPROTKB|Q28DW0 [details] [associations]
symbol:ciao1 "Probable cytosolic iron-sulfur protein
assembly protein ciao1" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] [GO:0097361 "CIA complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226
HOGENOM:HOG000208901 HSSP:P63005 CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:CR848572 EMBL:BC127279 RefSeq:NP_001016887.1
UniGene:Str.66175 ProteinModelPortal:Q28DW0 STRING:Q28DW0
Ensembl:ENSXETT00000009442 GeneID:549641 KEGG:xtr:549641
Xenbase:XB-GENE-1010751 OMA:EEEYECV Bgee:Q28DW0 Uniprot:Q28DW0
Length = 333
Score = 199 (75.1 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 59/214 (27%), Positives = 102/214 (47%)
Query: 148 LALTKDETLLYSVSWDRTIKIW-RTSD-FKCLESITNAHDDAINAVALSDDGDVYTGSA- 204
LA TLL S DRTI+IW + D + C + H + V+ S G+ Y SA
Sbjct: 22 LAWNPSGTLLASCGGDRTIRIWGKDGDNWVCKSVLGEGHQRTVRKVSWSPCGN-YLASAS 80
Query: 205 -DKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDD 263
D +W + ++ + LE H + + ++A + GS+L + + D+S+ VWE +E++
Sbjct: 81 FDATTCIWMKK--KEEFECITTLEGHENEVKSVAWAPSGSLLATCSRDKSVWVWEVDEEE 138
Query: 264 GNILVVGALRGHTKSI--LCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPV 321
V L HT+ + + +L+ S S D +++++R + ++ C A LEGH V
Sbjct: 139 -EYECVSVLNSHTQDVKHVVWHPNQELLASASYDDSVKLYREEEDDWVCCATLEGHTSTV 197
Query: 322 KCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQ 355
LA D + CS D +++W+
Sbjct: 198 WSLAF-------DQTGEQLATCSD--DKTVRIWR 222
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 201 (75.8 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 63/218 (28%), Positives = 102/218 (46%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDD-GD- 198
H+ ++ +A K + + S+DRT KIW T+ + L ++ H + + A+A ++ GD
Sbjct: 91 HILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTL-EGHRNVVYAIAFNNPYGDK 149
Query: 199 VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWE 258
V TGS DK K+W G ++ H + I LA + +++ +G+ D + +W+
Sbjct: 150 VATGSFDKTCKLWSAETGKCFYTF----RGHTAEIVCLAFNPQSTLVATGSMDTTAKLWD 205
Query: 259 KEEDDGNILVVGALRGHTKSI--LCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEG 316
E + V L GH I LC D + +GS D T +W + + VL G
Sbjct: 206 VESGEE----VSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILW-DVPSGRK-VHVLSG 259
Query: 317 HRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVW 354
HRG + C+ D C L+ + SLD KVW
Sbjct: 260 HRGEISCVQFNWD---CS------LIATASLDKSCKVW 288
Score = 186 (70.5 bits), Expect = 7.6e-12, P = 7.6e-12
Identities = 55/188 (29%), Positives = 86/188 (45%)
Query: 137 TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDD 196
T+ H + LA TL+ + S D T K+W + + ++ H I ++ +
Sbjct: 172 TFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAG-HFAEIISLCFNTT 230
Query: 197 GD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSII 255
GD + TGS D +W G K H VL H I+ + + D S++ + + D+S
Sbjct: 231 GDRLVTGSFDHTAILWDVPSGRKVH----VLSGHRGEISCVQFNWDCSLIATASLDKSCK 286
Query: 256 VWEKEEDDGNILVVGALRGHTKSIL--CMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAV 313
VW+ E G L L GH +L C L+ + SAD T R++ D + CL
Sbjct: 287 VWDAE--GGQCLAT--LLGHNDEVLDVCFNYTGQLIATASADGTSRVF-STD-TFQCLCQ 340
Query: 314 LEGHRGPV 321
LEGH+G +
Sbjct: 341 LEGHKGEI 348
Score = 155 (59.6 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 49/164 (29%), Positives = 71/164 (43%)
Query: 161 SWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKK 219
S+D+T K+W KC + H I +A + V TGS D K+W G +
Sbjct: 154 SFDKTCKLWSAETGKCFYTF-RGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEE- 211
Query: 220 HSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSI 279
V L H + I +L + G L +G+ D + I+W+ G V L GH I
Sbjct: 212 ---VSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPS--GR--KVHVLSGHRGEI 264
Query: 280 LCMAVVSD--LVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPV 321
C+ D L+ + S DK+ ++W CLA L GH V
Sbjct: 265 SCVQFNWDCSLIATASLDKSCKVWDA--EGGQCLATLLGHNDEV 306
Score = 155 (59.6 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 73/307 (23%), Positives = 124/307 (40%)
Query: 12 LTTLKGHNSYVSSLALAGKF---LYTGSSDNEVRSWDCNTFSSELDQEFLSNN-NIVAVG 67
L TL+GH + V ++A + + TGS D + W T + F + IV +
Sbjct: 127 LHTLEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAET--GKCFYTFRGHTAEIVCLA 184
Query: 68 KGAVKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQ---KYTRLATL--PTLGDRAIKLL 122
+LV + D ++W + + E + + +L T GDR +
Sbjct: 185 FNPQSTLVA------TGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGS 238
Query: 123 MPKNHVQI-----RRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCL 177
+H I K H +S + D +L+ + S D++ K+W +CL
Sbjct: 239 F--DHTAILWDVPSGRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCL 296
Query: 178 ESITNAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINAL 236
++ H+D + V + G + T SAD +V+ + LE H I+ +
Sbjct: 297 ATLLG-HNDEVLDVCFNYTGQLIATASADGTSRVF----STDTFQCLCQLEGHKGEISKV 351
Query: 237 ALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAV--VSDLVCSGSA 294
+ GS + + + D++ VW + G L V L GH+ I A D + +GS
Sbjct: 352 CFNAQGSRVLTASVDKTSRVWCVKT--GACLQV--LEGHSDEIFSCAFNYEGDTIITGSK 407
Query: 295 DKTIRIW 301
D T RIW
Sbjct: 408 DNTCRIW 414
Score = 131 (51.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 60/260 (23%), Positives = 103/260 (39%)
Query: 11 CLTTLKGHNSYVSSLAL--AGKFLYTGSSDNEVRSWDCNTFS--SELDQEFLSNNNIVAV 66
C T +GH + + LA + TGS D + WD + S L F I+++
Sbjct: 169 CFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAE---IISL 225
Query: 67 GKGAVKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLG---DRAI--KL 121
D+L + DH +W + + H + + D ++
Sbjct: 226 ------CFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCVQFNWDCSLIATA 279
Query: 122 LMPKN-HVQIRRHKTC--TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLE 178
+ K+ V C T + H D V + L+ + S D T +++ T F+CL
Sbjct: 280 SLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQCLC 339
Query: 179 SITNAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALA 237
+ H I+ V + G V T S DK +VW G + + VLE H+ I + A
Sbjct: 340 QL-EGHKGEISKVCFNAQGSRVLTASVDKTSRVWCVKTG----ACLQVLEGHSDEIFSCA 394
Query: 238 LSCDGSVLYSGACDRSIIVW 257
+ +G + +G+ D + +W
Sbjct: 395 FNYEGDTIITGSKDNTCRIW 414
Score = 126 (49.4 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 37/142 (26%), Positives = 60/142 (42%)
Query: 218 KKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTK 277
+K L L+ H + +A + GS +G+ DR+ +W+ + + L GH
Sbjct: 80 RKFYLFRALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEE----LHTLEGHRN 135
Query: 278 SILCMAV---VSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCD 334
+ +A D V +GS DKT ++W C GH + CLA
Sbjct: 136 VVYAIAFNNPYGDKVATGSFDKTCKLWSA--ETGKCFYTFRGHTAEIVCLAF-------- 185
Query: 335 SSDTSYLVCSGSLDCDIKVWQI 356
+ S LV +GS+D K+W +
Sbjct: 186 -NPQSTLVATGSMDTTAKLWDV 206
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 201 (75.8 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 54/188 (28%), Positives = 90/188 (47%)
Query: 137 TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDD 196
T+ H + L+ T++ + S D T K+W + + ++T H I +++
Sbjct: 172 TFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTG-HLAEIISLSFDTS 230
Query: 197 GD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSII 255
GD + TGS D + VW S G K H+L+ H + I++ S D S++ +G+ D++ +
Sbjct: 231 GDRIITGSFDHTVVVWDASTGRKVHTLIG----HCAEISSALFSWDCSLILTGSMDKTCM 286
Query: 256 VWEKEEDDGNILVVGALRGHTKSIL--CMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAV 313
+W+ G V L GH IL C L+ + SAD T R++ R C+
Sbjct: 287 LWDATS--GKC--VATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRK--CITK 340
Query: 314 LEGHRGPV 321
LEGH G +
Sbjct: 341 LEGHEGEI 348
Score = 197 (74.4 bits), Expect = 4.1e-13, P = 4.1e-13
Identities = 81/306 (26%), Positives = 133/306 (43%)
Query: 12 LTTLKGHNSYVSSLALAGKF---LYTGSSDNEVRSWDCNTFSSELDQEFLSNN-NIVAVG 67
L TL+GH + V ++A + + TGS D + W T + F + IV +
Sbjct: 127 LHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAET--GKCYHTFRGHTAEIVCLS 184
Query: 68 KGAVKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTL-----GDRAIKLL 122
+S VV + D ++W I + E LA + +L GDR I
Sbjct: 185 FNP-QSTVVATGSM-----DTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGS 238
Query: 123 MPKNHV---QIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLES 179
V K T + H +S+ + D +L+ + S D+T +W + KC+ +
Sbjct: 239 FDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVAT 298
Query: 180 ITNAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALAL 238
+T HDD I G + T SAD +V+ + +K + LE H I+ ++
Sbjct: 299 LTG-HDDEILDSCFDYTGKLIATASADGTARVYNAT--TRK--CITKLEGHEGEISKISF 353
Query: 239 SCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAV--VSDLVCSGSADK 296
+ G+ L +G+ D++ +W+ + G L V L GHT I A ++V +GS D
Sbjct: 354 NPQGNRLLTGSSDKTARIWDVQT--GQCLQV--LEGHTDEIFSCAFNYKGNIVITGSKDN 409
Query: 297 TIRIWR 302
+ RIWR
Sbjct: 410 SCRIWR 415
Score = 167 (63.8 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 64/270 (23%), Positives = 124/270 (45%)
Query: 95 INNQEPDHQKYTRLATLPTLGDRAIKLLMPKNHVQIRRHKTCTWV------HHVDAVSAL 148
+N + QK L T + ++LL+ + ++R+H + H+ ++ +
Sbjct: 41 VNTLVGEIQKVEPLITASRT--KQVRLLVQRLQEKLRQHCDHNFYLFKVLRAHILPLTNV 98
Query: 149 ALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDD-GD-VYTGSADK 206
AL K + + S+DRT K+W T+ + L ++ H + + A+A ++ GD + TGS DK
Sbjct: 99 ALNKAGSCFITGSYDRTCKVWDTASGEELHTL-EGHRNVVYAIAFNNPYGDKIATGSFDK 157
Query: 207 KIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNI 266
K+W G H+ H + I L+ + +V+ +G+ D + +W+ + G
Sbjct: 158 TCKLWSAETGKCYHTF----RGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQS--GEE 211
Query: 267 LVVGALRGHTKSILCMA--VVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCL 324
+V L GH I+ ++ D + +GS D T+ +W + L GH +
Sbjct: 212 VVT--LTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRK--VHTLIGHCAEI--- 264
Query: 325 AAAIDNDRCDSSDTSYLVCSGSLDCDIKVW 354
++A+ + C L+ +GS+D +W
Sbjct: 265 SSALFSWDCS------LILTGSMDKTCMLW 288
Score = 156 (60.0 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 53/185 (28%), Positives = 84/185 (45%)
Query: 177 LESITNAHDDAINAVALSDDGDVY-TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINA 235
L + AH + VAL+ G + TGS D+ KVW + G + H+L E H + + A
Sbjct: 84 LFKVLRAHILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTL----EGHRNVVYA 139
Query: 236 LALSCD-GSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAV--VSDLVCSG 292
+A + G + +G+ D++ +W E G RGHT I+C++ S +V +G
Sbjct: 140 IAFNNPYGDKIATGSFDKTCKLWSAET--GKCY--HTFRGHTAEIVCLSFNPQSTVVATG 195
Query: 293 SADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIK 352
S D T ++W I + L GH + L+ DR + +GS D +
Sbjct: 196 SMDTTAKLW-DIQSGEE-VVTLTGHLAEIISLSFDTSGDR---------IITGSFDHTVV 244
Query: 353 VWQIS 357
VW S
Sbjct: 245 VWDAS 249
>FB|FBgn0028496 [details] [associations]
symbol:CG30116 species:7227 "Drosophila melanogaster"
[GO:0016505 "apoptotic protease activator activity" evidence=NAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
UCSC:CG30116-RC FlyBase:FBgn0028496 EMBL:BT015296
ProteinModelPortal:Q6AWF2 PRIDE:Q6AWF2 InParanoid:Q6AWF2
ArrayExpress:Q6AWF2 Bgee:Q6AWF2 Uniprot:Q6AWF2
Length = 1923
Score = 210 (79.0 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 77/271 (28%), Positives = 122/271 (45%)
Query: 4 LSVVDHHCLTTLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNN 61
++ ++ C TL+GH + VS L A G+FL TGS D V W N E+ F +
Sbjct: 1241 INTPEYQC--TLEGHTAGVSCLKFAPNGEFLATGSEDRLVHIW--NLALGEICNSFKGHT 1296
Query: 62 NIVAVGKGAVKSLVVLADKL--FSAHQDHKIRVWKI---NNQEPDHQKYTRLAT------ 110
V VK +VVL D L S +D + VW N + Y L+
Sbjct: 1297 APV------VK-VVVLMDSLRVISTDRDSMLLVWMAHSGNLLQTIQGPYKSLSVTNNMRF 1349
Query: 111 -LPTLGDRAIKLLMPKNHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIW 169
+ T GD +K+ + + V H D ++ ++ D + S S D ++K+W
Sbjct: 1350 AVSTNGDNTLKIW------SLTQEDEKYSVSHSDEITCFEISADSVHIISGSRDMSLKVW 1403
Query: 170 RTSDFKCLESITNAHDDAINAVALS--DDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLE 227
+ + K L + H DA+ VA+S + V +GS D + +W G + H+L
Sbjct: 1404 QATGGK-LSQVLVGHSDAVTCVAVSVTNKTQVLSGSKDMNLILWDLLTGEEVHTLAG--- 1459
Query: 228 RHNSGINALALSCDGSVLYSGACDRSIIVWE 258
H + + +S DGS SG+ D+++IVWE
Sbjct: 1460 -HLGPVIGVKVSADGSTAVSGSDDKTLIVWE 1489
Score = 158 (60.7 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 45/159 (28%), Positives = 77/159 (48%)
Query: 147 ALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDG-DVYTGSAD 205
+L++T + S + D T+KIW + E + +H D I +S D + +GS D
Sbjct: 1340 SLSVTNNMRFAVSTNGDNTLKIWSLTQED--EKYSVSHSDEITCFEISADSVHIISGSRD 1397
Query: 206 KKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSV-LYSGACDRSIIVWEKEEDDG 264
+KVW+ + G L VL H+ + +A+S + SG+ D ++I+W+ +
Sbjct: 1398 MSLKVWQATGGK----LSQVLVGHSDAVTCVAVSVTNKTQVLSGSKDMNLILWDLLTGEE 1453
Query: 265 NILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIW 301
V L GH ++ + V +D SGS DKT+ +W
Sbjct: 1454 ----VHTLAGHLGPVIGVKVSADGSTAVSGSDDKTLIVW 1488
Score = 148 (57.2 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 51/210 (24%), Positives = 84/210 (40%)
Query: 127 HVQIRRHKT----CTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITN 182
HV + R T CT H VS L + L + S DR + IW + + S
Sbjct: 1235 HVHLMRINTPEYQCTLEGHTAGVSCLKFAPNGEFLATGSEDRLVHIWNLALGEICNSFKG 1294
Query: 183 AHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDG 242
+ V L D V + D + VW GN +L+ +L+++ +
Sbjct: 1295 HTAPVVKVVVLMDSLRVISTDRDSMLLVWMAHSGN-------LLQTIQGPYKSLSVTNNM 1347
Query: 243 SVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLV--CSGSADKTIRI 300
S D ++ +W ++D V H+ I C + +D V SGS D ++++
Sbjct: 1348 RFAVSTNGDNTLKIWSLTQEDEKYSV-----SHSDEITCFEISADSVHIISGSRDMSLKV 1402
Query: 301 WRGIDRNYTCLAVLEGHRGPVKCLAAAIDN 330
W+ + VL GH V C+A ++ N
Sbjct: 1403 WQATGGKLS--QVLVGHSDAVTCVAVSVTN 1430
Score = 131 (51.2 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 51/211 (24%), Positives = 93/211 (44%)
Query: 141 HVDAVSALALT--KDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD 198
H AV+ L + D LL + S D T+ +W + I NAH I VA +
Sbjct: 938 HTAAVTCLLVAPQSDSELLLTGSEDATVLVWHVGLRERRAHIKNAHTAPITGVAAGANNT 997
Query: 199 -VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALS--CDGSVLYSGACDRSII 255
+ + S D I + + G +H + H ++ + ++ CD VL SG DR+I
Sbjct: 998 LIISSSEDASIAITDLASGKLRHRIT----HHRGPVSGIVVAGACD--VLISGGLDRTIC 1051
Query: 256 VWEKEEDDGNILVVGALRGHTKSILCMAVV--SDLVCSGSADKTIRIWRGIDRNYTCLAV 313
VW+ + N ++ ++ T ++L + + S + + D + + R + L
Sbjct: 1052 VWDLD----NFTLLNTMQ-MTSAVLRIDISWNSVFLLALCEDNALYV-RTLATGKE-LHT 1104
Query: 314 LEGHRGPVKCLAAAIDNDRC--DSSDTSYLV 342
L+GH+ ++ ++ D+ RC DT L+
Sbjct: 1105 LKGHKSKIRSISIGKDSQRCVVGCDDTRALI 1135
Score = 53 (23.7 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 18/65 (27%), Positives = 26/65 (40%)
Query: 16 KGHNSYVSSLALA----GKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAV 71
KGH + V+ L +A + L TGS D V W + I V GA
Sbjct: 936 KGHTAAVTCLLVAPQSDSELLLTGSEDATVLVWHVGLRERRAHIKNAHTAPITGVAAGAN 995
Query: 72 KSLVV 76
+L++
Sbjct: 996 NTLII 1000
Score = 48 (22.0 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 18 HNSYVSSLALAGK--FLYTGSSDNEVRSWDCNTFS 50
H VS + +AG L +G D + WD + F+
Sbjct: 1025 HRGPVSGIVVAGACDVLISGGLDRTICVWDLDNFT 1059
Score = 45 (20.9 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 12 LTTLKGHNSYVSSLALAGK 30
L TLKGH S + S+++ GK
Sbjct: 1102 LHTLKGHKSKIRSISI-GK 1119
>FB|FBgn0041171 [details] [associations]
symbol:ago "archipelago" species:7227 "Drosophila
melanogaster" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0008054 "cyclin catabolic process" evidence=TAS]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0030332 "cyclin binding"
evidence=TAS] [GO:0007096 "regulation of exit from mitosis"
evidence=TAS] [GO:0045926 "negative regulation of growth"
evidence=IMP] [GO:0042023 "DNA endoreduplication" evidence=IMP]
[GO:0035147 "branch fusion, open tracheal system" evidence=IMP]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] [GO:0007411 "axon guidance" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0007411 GO:GO:0007088
EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0045926
GO:GO:0019005 GO:GO:0008054 GO:GO:0007096 GO:GO:0035147
GO:GO:0042023 GO:GO:0030332 GeneTree:ENSGT00690000101849
EMBL:AY061300 EMBL:AY075401 RefSeq:NP_523922.1 RefSeq:NP_728964.1
RefSeq:NP_728965.1 UniGene:Dm.2559 ProteinModelPortal:Q9VZF4
SMR:Q9VZF4 DIP:DIP-32477N IntAct:Q9VZF4 MINT:MINT-901835
STRING:Q9VZF4 PaxDb:Q9VZF4 PRIDE:Q9VZF4 EnsemblMetazoa:FBtr0073245
EnsemblMetazoa:FBtr0073246 EnsemblMetazoa:FBtr0073247 GeneID:38516
KEGG:dme:Dmel_CG15010 UCSC:CG15010-RA CTD:38516 FlyBase:FBgn0041171
InParanoid:Q9VZF4 KO:K10260 OMA:DLEEICT OrthoDB:EOG45TB38
PhylomeDB:Q9VZF4 GenomeRNAi:38516 NextBio:809050 Bgee:Q9VZF4
GermOnline:CG15010 GO:GO:0060253 Uniprot:Q9VZF4
Length = 1326
Score = 208 (78.3 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 59/187 (31%), Positives = 94/187 (50%)
Query: 169 WRTSDFKCLESITNAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLE 227
WR+ + + HDD + L G+ + +GS D +KVW G +LV
Sbjct: 979 WRSRPVR-KPKVLKGHDDHV-ITCLQFSGNRIVSGSDDNTLKVWSAVNGKCLRTLVG--- 1033
Query: 228 RHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD 287
H G+ + +S G+++ SG+ DR++ VW+ D G V L+GHT ++ CM +
Sbjct: 1034 -HTGGVWSSQMS--GNIIISGSTDRTLKVWDM--DSG--ACVHTLQGHTSTVRCMHLHGS 1086
Query: 288 LVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSL 347
V SGS D T+R+W I++ +CL VL GH V+C+ + D L+ SG+
Sbjct: 1087 KVVSGSRDATLRVW-DIEQG-SCLHVLVGHLAAVRCV-------QYDGK----LIVSGAY 1133
Query: 348 DCDIKVW 354
D +K+W
Sbjct: 1134 DYMVKIW 1140
Score = 204 (76.9 bits), Expect = 4.8e-13, P = 4.8e-13
Identities = 76/297 (25%), Positives = 133/297 (44%)
Query: 15 LKGHNSYV-SSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGK-GAVK 72
LKGH+ +V + L +G + +GS DN ++ W S ++ + L VG G V
Sbjct: 990 LKGHDDHVITCLQFSGNRIVSGSDDNTLKVW------SAVNGKCLRT----LVGHTGGVW 1039
Query: 73 SLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLGDRAIKLLMPKNHVQIR- 131
S + + + S D ++VW +++ H +T+ + K++ +R
Sbjct: 1040 SSQMSGNIIISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHLHGSKVVSGSRDATLRV 1099
Query: 132 ---RHKTC--TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDD 186
+C V H+ AV + D L+ S ++D +KIW +CL ++ H +
Sbjct: 1100 WDIEQGSCLHVLVGHLAAVRCVQY--DGKLIVSGAYDYMVKIWHPERQECLHTL-QGHTN 1156
Query: 187 AINAVALSDDG-DVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVL 245
+ +L DG V +GS D I+VW GN KH+L+ H S + + L ++L
Sbjct: 1157 RV--YSLQFDGLHVVSGSLDTSIRVWDVETGNCKHTLMG----HQSLTSGMELR--QNIL 1208
Query: 246 YSGACDRSIIVWEKEEDDGNIL-VVGALRGHTKSILCMAVVSDLVCSGSADKTIRIW 301
SG D ++ VW+ G L + H ++ C+ S V + S D T+++W
Sbjct: 1209 VSGNADSTVKVWDITT--GQCLQTLSGPNKHHSAVTCLQFNSRFVVTSSDDGTVKLW 1263
Score = 179 (68.1 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 59/221 (26%), Positives = 101/221 (45%)
Query: 137 TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDD 196
T V H V + ++ + ++ S S DRT+K+W C+ ++ H + + L
Sbjct: 1030 TLVGHTGGVWSSQMSGN--IIISGSTDRTLKVWDMDSGACVHTL-QGHTSTVRCMHLHGS 1086
Query: 197 GDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIV 256
V +GS D ++VW G+ H LV H + + + DG ++ SGA D + +
Sbjct: 1087 -KVVSGSRDATLRVWDIEQGSCLHVLVG----HLAAVRCVQY--DGKLIVSGAYDYMVKI 1139
Query: 257 WEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEG 316
W E + + L+GHT + + V SGS D +IR+W ++ C L G
Sbjct: 1140 WHPERQE----CLHTLQGHTNRVYSLQFDGLHVVSGSLDTSIRVW-DVETG-NCKHTLMG 1193
Query: 317 HRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQIS 357
H+ L + ++ + + LV SG+ D +KVW I+
Sbjct: 1194 HQS----LTSGMELRQ------NILV-SGNADSTVKVWDIT 1223
Score = 147 (56.8 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 68/303 (22%), Positives = 130/303 (42%)
Query: 5 SVVDHHCLTTLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIV 64
S V+ CL TL GH V S ++G + +GS+D ++ WD ++ + L +
Sbjct: 1021 SAVNGKCLRTLVGHTGGVWSSQMSGNIIISGSTDRTLKVWDMDSGACV---HTLQGHT-- 1075
Query: 65 AVGKGAVKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLGDRAIKLLMP 124
V+ + + K+ S +D +RVW I H LA + + KL++
Sbjct: 1076 ----STVRCMHLHGSKVVSGSRDATLRVWDIEQGSCLHVLVGHLAAVRCVQYDG-KLIVS 1130
Query: 125 KNH---VQI--RRHKTC--TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCL 177
+ V+I + C T H + V +L D + S S D +I++W C
Sbjct: 1131 GAYDYMVKIWHPERQECLHTLQGHTNRVYSLQF--DGLHVVSGSLDTSIRVWDVETGNCK 1188
Query: 178 ESITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALA 237
++ H + + L + + +G+AD +KVW + G +L +H+S + L
Sbjct: 1189 HTLMG-HQSLTSGMELRQN-ILVSGNADSTVKVWDITTGQCLQTLSGP-NKHHSAVTCLQ 1245
Query: 238 LSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCS-GSA 294
+ + + + D ++ +W+ + D +V G + ++ +D L+C+ GS
Sbjct: 1246 FN--SRFVVTSSDDGTVKLWDVKTGDFIRNLVALDSGGSGGVVWRIRANDTKLICAVGSR 1303
Query: 295 DKT 297
+ T
Sbjct: 1304 NGT 1306
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 195 (73.7 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 59/204 (28%), Positives = 92/204 (45%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDG-DV 199
H V + + D L+ S S D +I++W + KCL + H ++ V+ S D +
Sbjct: 67 HRGPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLH-VLKGHQRSVETVSFSPDSKQL 125
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEK 259
+G DK+ VW G + H LV H I + S L +G+ D ++ +W+
Sbjct: 126 ASGGWDKRAIVWEVQSGRRVHLLVG----HCDSIQSSDFSPTSDSLATGSWDSTVHIWDL 181
Query: 260 EEDDGNILVVGALRGHTKSILCMAV-VSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHR 318
++ L GHT +I C+ S L+ SGS DKTI +W+ N L+GH
Sbjct: 182 RASTP-VVSYHNLEGHTGNISCLCYSASGLLASGSWDKTICVWKPTTNNLPLQ--LKGHT 238
Query: 319 GPVKCLAAAIDNDRCDSSDTSYLV 342
V LA + D + S+ S V
Sbjct: 239 IWVNSLAFSPDELKLASAGYSRTV 262
Score = 184 (69.8 bits), Expect = 4.2e-12, P = 4.2e-12
Identities = 65/221 (29%), Positives = 100/221 (45%)
Query: 140 HHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD- 198
HH + V+ A + D L + S D + +W T + L + H + + S DG
Sbjct: 25 HHGE-VNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAG-HRGPVKSCCFSPDGRL 82
Query: 199 VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWE 258
+ + S+D I++W + H VL+ H + ++ S D L SG D+ IVWE
Sbjct: 83 IASSSSDHSIRLWDVARSKCLH----VLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWE 138
Query: 259 KEEDDGNILVVGALRGHTKSILC--MAVVSDLVCSGSADKTIRIWRGIDRNYTCLAV--L 314
+ L+VG H SI + SD + +GS D T+ IW + + ++ L
Sbjct: 139 VQSGRRVHLLVG----HCDSIQSSDFSPTSDSLATGSWDSTVHIW-DLRASTPVVSYHNL 193
Query: 315 EGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQ 355
EGH G + CL C S+ S L+ SGS D I VW+
Sbjct: 194 EGHTGNISCL--------CYSA--SGLLASGSWDKTICVWK 224
Score = 140 (54.3 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 65/255 (25%), Positives = 103/255 (40%)
Query: 18 HNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAVKSLV 75
H+ V+ A + G+ L T S D V W T S L + +G VKS
Sbjct: 25 HHGEVNCSAFSPDGRTLLTASDDGCVYVW--GTKSGRLLWRLAGH-------RGPVKSCC 75
Query: 76 VLAD-KLF-SAHQDHKIRVWKINNQE-----PDHQKYTRLATLPTLGDRAIKLLMPKNHV 128
D +L S+ DH IR+W + + HQ+ + + K +
Sbjct: 76 FSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAI 135
Query: 129 --QIRR-HKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITN--A 183
+++ + V H D++ + + L + SWD T+ IW + S N
Sbjct: 136 VWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEG 195
Query: 184 HDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGS 243
H I+ + S G + +GS DK I VW+ + N L L+ H +N+LA S D
Sbjct: 196 HTGNISCLCYSASGLLASGSWDKTICVWKPTTNN----LPLQLKGHTIWVNSLAFSPDEL 251
Query: 244 VLYSGACDRSIIVWE 258
L S R++ VW+
Sbjct: 252 KLASAGYSRTVKVWD 266
Score = 131 (51.2 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 52/184 (28%), Positives = 77/184 (41%)
Query: 184 HDDAINAVALSDDG-DVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDG 242
H +N A S DG + T S D + VW G K L+ L H + + S DG
Sbjct: 25 HHGEVNCSAFSPDGRTLLTASDDGCVYVW----GTKSGRLLWRLAGHRGPVKSCCFSPDG 80
Query: 243 SVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDL--VCSGSADKTIRI 300
++ S + D SI +W D + L+GH +S+ ++ D + SG DK +
Sbjct: 81 RLIASSSSDHSIRLW----DVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIV 136
Query: 301 WRGIDRNYTCLAVLEGHRGPVKCLAAAIDN-DRCDSSDTSYLVCSGSLDCDIKVWQI--S 357
W V G R V L D+ D S TS + +GS D + +W + S
Sbjct: 137 WE----------VQSGRR--VHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRAS 184
Query: 358 FPLV 361
P+V
Sbjct: 185 TPVV 188
Score = 123 (48.4 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 37/124 (29%), Positives = 62/124 (50%)
Query: 213 RSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILV-VGA 271
R+P V +H+ +N A S DG L + + D + VW + G +L +
Sbjct: 9 RAPTRLAVGRVRFYGQHHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKS--GRLLWRLAG 66
Query: 272 LRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDND 331
RG KS C + L+ S S+D +IR+W + R+ CL VL+GH+ V+ ++ + D+
Sbjct: 67 HRGPVKSC-CFSPDGRLIASSSSDHSIRLW-DVARS-KCLHVLKGHQRSVETVSFSPDSK 123
Query: 332 RCDS 335
+ S
Sbjct: 124 QLAS 127
>UNIPROTKB|E1BM03 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 KO:K14556 OMA:SIFAHDD CTD:10885
EMBL:DAAA02007388 IPI:IPI00694068 RefSeq:NP_001179317.1
UniGene:Bt.25958 ProteinModelPortal:E1BM03 PRIDE:E1BM03
Ensembl:ENSBTAT00000026561 GeneID:514870 KEGG:bta:514870
NextBio:20871548 Uniprot:E1BM03
Length = 943
Score = 167 (63.8 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 73/303 (24%), Positives = 129/303 (42%)
Query: 14 TLKGHNSYVSSLALAG-KFLYTGSSDNEVRSWD-----C-NTFSSE--LDQEFLSNNNIV 64
T+ GH S V +L+ + ++ + ++ W+ C T + E L F+ + V
Sbjct: 410 TIGGHRSDVRTLSFSSDNIAILSAAADSIKIWNRSTLQCIRTMACEYALCSFFVPGDRQV 469
Query: 65 AVGKGAVK-SLVVLAD-KLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLGDRAIKLL 122
+G K L LA L H +W ++ PD + + ++ +L+
Sbjct: 470 VIGTKTGKLQLYDLASGNLLETIDAHDGALWSLS-LSPDQRGFVTGGADKSVKFWDFELV 528
Query: 123 MPKNHVQIRRHKTCTWVHHVDA-VSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESIT 181
+N Q R T +D V ++ + ++ LL D T+KI+ K S+
Sbjct: 529 KDENSTQKRLSVKQTRTLQLDEEVLCVSYSPNQKLLAVSLLDCTVKIFYVDTLKFFLSLY 588
Query: 182 NAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSC 240
H + + +S DG + TGSAD+ +K+W G+ SL H+ + L
Sbjct: 589 G-HKLPVICMDISYDGALIATGSADRNVKIWGLDFGDCHKSLF----AHDDSVMYLRFVP 643
Query: 241 DGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVV--SDLVCSGSADKTI 298
+ ++ DR I W+ ++ + + L GH + I C+AV D V S S DK++
Sbjct: 644 KSHLFFTAGKDRKIKQWDADKFEH----IQTLEGHHQEIWCLAVSPSGDYVVSSSHDKSL 699
Query: 299 RIW 301
R+W
Sbjct: 700 RLW 702
Score = 163 (62.4 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 61/238 (25%), Positives = 115/238 (48%)
Query: 130 IRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAIN 189
+R ++ H D V L+ + D + S + D +IKIW S +C+ T A + A+
Sbjct: 404 VRTNRITIGGHRSD-VRTLSFSSDNIAILSAAAD-SIKIWNRSTLQCIR--TMACEYALC 459
Query: 190 AVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGA 249
+ + D V G+ K++++ + GN L++ ++ H+ + +L+LS D +G
Sbjct: 460 SFFVPGDRQVVIGTKTGKLQLYDLASGN----LLETIDAHDGALWSLSLSPDQRGFVTGG 515
Query: 250 CDRSIIVWEKE--EDDGNI---LVVGALRGHT--KSILCMAVVSD--LVCSGSADKTIRI 300
D+S+ W+ E +D+ + L V R + +LC++ + L+ D T++I
Sbjct: 516 ADKSVKFWDFELVKDENSTQKRLSVKQTRTLQLDEEVLCVSYSPNQKLLAVSLLDCTVKI 575
Query: 301 WRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQISF 358
+ +D L+ L GH+ PV C+ D S L+ +GS D ++K+W + F
Sbjct: 576 FY-VDTLKFFLS-LYGHKLPVICM---------DISYDGALIATGSADRNVKIWGLDF 622
Score = 134 (52.2 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 36/123 (29%), Positives = 60/123 (48%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H V + ++ D L+ + S DR +KIW C +S+ AHDD++ + ++
Sbjct: 590 HKLPVICMDISYDGALIATGSADRNVKIWGLDFGDCHKSLF-AHDDSVMYLRFVPKSHLF 648
Query: 201 -TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEK 259
T D+KIK W K + LE H+ I LA+S G + S + D+S+ +WE+
Sbjct: 649 FTAGKDRKIKQWDAD----KFEHIQTLEGHHQEIWCLAVSPSGDYVVSSSHDKSLRLWER 704
Query: 260 EED 262
+
Sbjct: 705 TRE 707
Score = 120 (47.3 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 74/339 (21%), Positives = 145/339 (42%)
Query: 38 DNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAVKSLVVLADKL--FSAHQDHKIRVWKI 95
+N V + N S+ Q +N + + V++L +D + SA D I++W
Sbjct: 386 NNLVELYSLNA-STPGPQPVRTNRITIGGHRSDVRTLSFSSDNIAILSAAAD-SIKIWNR 443
Query: 96 NNQEPDHQ---KYTRLATLPTLGDRAIKLLMPKNHVQIRRHKTCTWVHHVDA----VSAL 148
+ + +Y L + GDR + + +Q+ + + +DA + +L
Sbjct: 444 STLQCIRTMACEYA-LCSFFVPGDRQVVIGTKTGKLQLYDLASGNLLETIDAHDGALWSL 502
Query: 149 ALTKDETLLYSVSWDRTIKIWRTSDFKCL--ESITNAHDDAINAVALSDDGDVY--TGSA 204
+L+ D+ + D+++K W DF+ + E+ T L D +V + S
Sbjct: 503 SLSPDQRGFVTGGADKSVKFW---DFELVKDENSTQKRLSVKQTRTLQLDEEVLCVSYSP 559
Query: 205 DKKIKVWRRSPGNKKHSLVDVLE------RHNSGINALALSCDGSVLYSGACDRSIIVWE 258
++K+ K VD L+ H + + +S DG+++ +G+ DR++ +W
Sbjct: 560 NQKLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDISYDGALIATGSADRNVKIWG 619
Query: 259 KEEDDGNILVVGALRGHTKSILCMAVV--SDLVCSGSADKTIRIWRGIDRNYTCLAVLEG 316
+ D + +L H S++ + V S L + D+ I+ W D+ + + LEG
Sbjct: 620 LDFGDCH----KSLFAHDDSVMYLRFVPKSHLFFTAGKDRKIKQWDA-DK-FEHIQTLEG 673
Query: 317 HRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQ 355
H + CLA + D Y+V S S D +++W+
Sbjct: 674 HHQEIWCLAVSPSGD--------YVV-SSSHDKSLRLWE 703
Score = 91 (37.1 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 20/49 (40%), Positives = 27/49 (55%)
Query: 10 HCLTTLKGHNSYVSSLALAG--KFLYTGSSDNEVRSWDCNTFSSELDQE 56
HC T+ GH + V L L K L TG+SD+E+R+WD + D E
Sbjct: 182 HCFKTMVGHRTEVWGLVLVSEEKRLITGASDSELRAWDISYLQEIEDPE 230
Score = 62 (26.9 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 26/93 (27%), Positives = 41/93 (44%)
Query: 6 VVDHHCLTTLKGHNSYVS-SLALAGK-FLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNI 63
V++ L LKGH ++ +L L K L T D V+ WD +T + + +
Sbjct: 136 VINESGLYRLKGHKDAITQALFLREKNLLVTSGKDTMVKWWDLDT--QHCFKTMVGHRTE 193
Query: 64 VAVGKGAVKSLVVLADKLFSAHQDHKIRVWKIN 96
V G V LV +L + D ++R W I+
Sbjct: 194 VW---GLV--LVSEEKRLITGASDSELRAWDIS 221
Score = 56 (24.8 bits), Expect = 8.1e-10, Sum P(2) = 8.1e-10
Identities = 24/90 (26%), Positives = 43/90 (47%)
Query: 14 TLKGHNSYVSSLA---LAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGA 70
T GH + ++SL L G+ L +GS D ++ WD S L + L + K A
Sbjct: 102 TFNGHKAAITSLKYDQLGGR-LASGSKDTDIIVWDVIN-ESGLYR--LKGH------KDA 151
Query: 71 VKSLVVLADK--LFSAHQDHKIRVWKINNQ 98
+ + L +K L ++ +D ++ W ++ Q
Sbjct: 152 ITQALFLREKNLLVTSGKDTMVKWWDLDTQ 181
>UNIPROTKB|B5X9P2 [details] [associations]
symbol:ciao1a "Probable cytosolic iron-sulfur protein
assembly protein ciao1-A" species:8030 "Salmo salar" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0097361 EMBL:BT047761
ProteinModelPortal:B5X9P2 Uniprot:B5X9P2
Length = 330
Score = 196 (74.1 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 60/207 (28%), Positives = 98/207 (47%)
Query: 155 TLLYSVSWDRTIKIW-RTSD-FKCLESITNAHDDAINAVALSDDGDVYTGSA--DKKIKV 210
TLL S DR I+IW R D ++C + + H A+ VA S G+ Y SA D +
Sbjct: 29 TLLASCGGDRAIRIWGREGDSWECKTVLQDGHQRAVRKVAWSPCGN-YLASASFDATTCI 87
Query: 211 WRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVG 270
W++ N + VLE H + + +A + G+ L + + D+S+ +WE +E+D V
Sbjct: 88 WKKK--NDDFECLTVLEGHENEVKCVAWAPSGNQLATCSRDKSVWIWEVDEED-EYECVS 144
Query: 271 ALRGHTKSI--LCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAI 328
+ HT+ + + +L+ S S D + +++ D ++ C A LEGH V L
Sbjct: 145 VVNSHTQDVKHVVWHPTQELLASCSYDNNVCVYKEEDDDWECRATLEGHTSTVWGLTF-- 202
Query: 329 DNDRCDSSDTSYLVCSGSLDCDIKVWQ 355
D S CS D +K+W+
Sbjct: 203 -----DPSGQRLASCSD--DRTVKIWK 222
Score = 148 (57.2 bits), Expect = 9.5e-08, P = 9.5e-08
Identities = 42/147 (28%), Positives = 70/147 (47%)
Query: 182 NAHDDA-INAVALSDDGDVYTG-SADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALS 239
NAH D+ VA + G + D+ I++W R G+ + + H + +A S
Sbjct: 12 NAHPDSRCWYVAWNPKGTLLASCGGDRAIRIWGRE-GDSWECKTVLQDGHQRAVRKVAWS 70
Query: 240 CDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVV--SDLVCSGSADKT 297
G+ L S + D + +W+K+ DD L V L GH + C+A + + + S DK+
Sbjct: 71 PCGNYLASASFDATTCIWKKKNDDFECLTV--LEGHENEVKCVAWAPSGNQLATCSRDKS 128
Query: 298 IRIWRGIDRN--YTCLAVLEGHRGPVK 322
+ IW +D Y C++V+ H VK
Sbjct: 129 VWIWE-VDEEDEYECVSVVNSHTQDVK 154
Score = 126 (49.4 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 35/117 (29%), Positives = 56/117 (47%)
Query: 242 GSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSI--LCMAVVSDLVCSGSADKTIR 299
G++L S DR+I +W +E D V GH +++ + + + + S S D T
Sbjct: 28 GTLLASCGGDRAIRIWGREGDSWECKTV-LQDGHQRAVRKVAWSPCGNYLASASFDATTC 86
Query: 300 IWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
IW+ + ++ CL VLEGH VKC+A A S CS D + +W++
Sbjct: 87 IWKKKNDDFECLTVLEGHENEVKCVAWA-------PSGNQLATCSR--DKSVWIWEV 134
>POMBASE|SPBC1289.11 [details] [associations]
symbol:spf38 "splicing factor Spf38" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IC] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1289.11
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0045292 PIR:T39362 RefSeq:NP_596835.1
ProteinModelPortal:O94620 IntAct:O94620 STRING:O94620
EnsemblFungi:SPBC1289.11.1 GeneID:2539984 KEGG:spo:SPBC1289.11
HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE OrthoDB:EOG43BQZ4
NextBio:20801127 Uniprot:O94620
Length = 340
Score = 196 (74.1 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 69/225 (30%), Positives = 108/225 (48%)
Query: 129 QIRRHKTCTWVHHVDAVSALALTK-DETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDA 187
+IR+HK H V+AL + K LL SVS D T+K+W + C+++I +
Sbjct: 127 KIRKHKG-----HAGVVNALDVLKVGSELLTSVSDDCTMKVWDSRSKDCIKTIEEKYP-- 179
Query: 188 INAVALSDDG-DVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLY 246
+ AVA++ G V+ G D IK+W + H VL+ H I +LA+S DGS L
Sbjct: 180 LTAVAIAQQGTQVFIGGIDGAIKIWDLRNNHCSH----VLKGHKDIITSLAISKDGSSLL 235
Query: 247 SGACDRSIIVWEKE---EDDGNILVV-GALRGHTKSILCMAVV--SDLVCSGSADKTIRI 300
S + D ++ +++ + + + GA+ G ++L +A S V +GS+DK + +
Sbjct: 236 SNSMDNTVRIFDVKPFASAQRQLQIFEGAIHGQEHNLLGVAWSRNSRFVGAGSSDKNVYV 295
Query: 301 WRGI-DRNYTCLAVLEGHRGPVKCLAAAIDND---RCDSSDTSYL 341
W D Y VL GH G V + D C S T +L
Sbjct: 296 WSATGDLRY----VLPGHEGSVNHVDFHPHQDIILSCSSDRTIFL 336
Score = 132 (51.5 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 64/249 (25%), Positives = 113/249 (45%)
Query: 30 KFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAVKSLVVLADKLFSAHQDHK 89
+ +Y SSD + SWD S + ++ + +V A+ L V ++ L S D
Sbjct: 106 RVVYCSSSDTHLMSWDA--VSGQKIRKHKGHAGVV----NALDVLKVGSELLTSVSDDCT 159
Query: 90 IRVWKINNQE---PDHQKY--TRLA-----TLPTLG--DRAIKLLMPKNHVQIRRHKTCT 137
++VW +++ +KY T +A T +G D AIK+ +N+ H +
Sbjct: 160 MKVWDSRSKDCIKTIEEKYPLTAVAIAQQGTQVFIGGIDGAIKIWDLRNN-----HCSHV 214
Query: 138 WVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINA------- 190
H D +++LA++KD + L S S D T++I+ F + + AI+
Sbjct: 215 LKGHKDIITSLAISKDGSSLLSNSMDNTVRIFDVKPFASAQRQLQIFEGAIHGQEHNLLG 274
Query: 191 VALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGA 249
VA S + V GS+DK + VW + G+ ++ VL H +N + ++ S +
Sbjct: 275 VAWSRNSRFVGAGSSDKNVYVWSAT-GDLRY----VLPGHEGSVNHVDFHPHQDIILSCS 329
Query: 250 CDRSIIVWE 258
DR+I + E
Sbjct: 330 SDRTIFLGE 338
>DICTYBASE|DDB_G0291231 [details] [associations]
symbol:mhkA "myosin heavy chain kinase A"
species:44689 "Dictyostelium discoideum" [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0006468 "protein phosphorylation"
evidence=IEA;IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0004672 "protein kinase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0018107 "peptidyl-threonine
phosphorylation" evidence=IDA] [GO:0051764 "actin crosslink
formation" evidence=IDA] [GO:0051260 "protein homooligomerization"
evidence=IDA] [GO:0051017 "actin filament bundle assembly"
evidence=IDA] [GO:0051015 "actin filament binding" evidence=IDA]
[GO:0005938 "cell cortex" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0031037 "myosin II filament disassembly"
evidence=IDA;IMP] [GO:0000910 "cytokinesis" evidence=IMP]
[GO:0045159 "myosin II binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA;IC] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA;IDA] [GO:0016905 "myosin heavy chain
kinase activity" evidence=IEA;IDA] [GO:0046777 "protein
autophosphorylation" evidence=IDA] [GO:0016772 "transferase
activity, transferring phosphorus-containing groups" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR004166
InterPro:IPR011009 InterPro:IPR015943 Pfam:PF00400 Pfam:PF02816
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS51158 SMART:SM00320
SMART:SM00811 dictyBase:DDB_G0291231 GO:GO:0005524 GO:GO:0005938
EMBL:AAFI02000177 GenomeReviews:CM000155_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 SUPFAM:SSF56112
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051260
GO:GO:0051015 GO:GO:0046777 GO:GO:0016887 GO:GO:0051017
GO:GO:0000910 GO:GO:0051764 GO:GO:0018107 BRENDA:2.7.11.7
GO:GO:0031037 EMBL:U16856 PIR:A55532 RefSeq:XP_635119.1 PDB:3LKM
PDB:3LLA PDB:3LMH PDB:3LMI PDB:3PDT PDBsum:3LKM PDBsum:3LLA
PDBsum:3LMH PDBsum:3LMI PDBsum:3PDT ProteinModelPortal:P42527
EnsemblProtists:DDB0216274 GeneID:8628066 KEGG:ddi:DDB_G0291231
OMA:NEQVERV ProtClustDB:CLSZ2429540 EvolutionaryTrace:P42527
GO:GO:0016905 Uniprot:P42527
Length = 1146
Score = 205 (77.2 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 63/203 (31%), Positives = 98/203 (48%)
Query: 125 KNHVQIRRHKT-C--TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESIT 181
K H+ IR T C T V H V+ + +E L+S S+D+TIK+W S FK ++S
Sbjct: 935 KVHI-IRSGNTKCIETLVGHTGEVNCVVA--NEKYLFSCSYDKTIKVWDLSTFKEIKSFE 991
Query: 182 NAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCD 241
H I +ALS +++G D+ I VW + S++ ++ H + L+L C
Sbjct: 992 GVHTKYIKTLALSGRY-LFSGGNDQIIYVW----DTETLSMLFNMQGHEDWV--LSLHCT 1044
Query: 242 GSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIW 301
S L+S + D I +W D N + L+GH S+ V + SGS D +I++W
Sbjct: 1045 ASYLFSTSKDNVIKIW----DLSNFSCIDTLKGHWNSVSSCVVKDRYLYSGSEDNSIKVW 1100
Query: 302 RGIDRNYTCLAVLEGHRGPVKCL 324
+D + + H VKCL
Sbjct: 1101 -DLDTLECVYTIPKSHSLGVKCL 1122
Score = 191 (72.3 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 68/258 (26%), Positives = 119/258 (46%)
Query: 11 CLTTLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGA 70
CL T+ GH + S+A +++T S DN ++ + +++ + + + G
Sbjct: 904 CLYTVNGHRKSIESIACNSNYIFTSSPDNTIKVHIIRSGNTKCIETLVGHT-------GE 956
Query: 71 VKSLVVLADKLFSAHQDHKIRVW------KINNQEPDHQKYTRLATLPTLGDRAIKLLMP 124
V +V LFS D I+VW +I + E H KY + TL L R +
Sbjct: 957 VNCVVANEKYLFSCSYDKTIKVWDLSTFKEIKSFEGVHTKYIK--TL-ALSGRYLFSGGN 1013
Query: 125 KNHVQIRRHKTCTWVH----HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESI 180
+ + +T + + H D V +L T + L+S S D IKIW S+F C++++
Sbjct: 1014 DQIIYVWDTETLSMLFNMQGHEDWVLSLHCTA--SYLFSTSKDNVIKIWDLSNFSCIDTL 1071
Query: 181 TNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSC 240
H +++++ + D +Y+GS D IKVW + + + + H+ G+ L +
Sbjct: 1072 -KGHWNSVSSCVVKDRY-LYSGSEDNSIKVWDL---DTLECVYTIPKSHSLGVKCLMVF- 1125
Query: 241 DGSVLYSGACDRSIIVWE 258
+ + S A D SI VWE
Sbjct: 1126 -NNQIISAAFDGSIKVWE 1142
Score = 148 (57.2 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 56/215 (26%), Positives = 101/215 (46%)
Query: 111 LPTL--GDRAIKL---LMPKNHVQIRRHKTCTWVHHV-DAVSALALTKDETLLYSVSWDR 164
LP L D IK+ +PK + K + + + V+++A ++ LL + D
Sbjct: 832 LPELMPSDNTIKVGAKQLPKAEFSKKDLKCVSTIQSFRERVNSIAFFDNQKLLCAGYGDG 891
Query: 165 TIKIWRTSD-FKCLESITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLV 223
T +++ +D +KCL ++ N H +I ++A + + ++T S D IKV GN K +
Sbjct: 892 TYRVFDVNDNWKCLYTV-NGHRKSIESIACNSNY-IFTSSPDNTIKVHIIRSGNTK--CI 947
Query: 224 DVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRG-HTKSILCM 282
+ L H +N + + L+S + D++I VW D + + G HTK I +
Sbjct: 948 ETLVGHTGEVNCVV--ANEKYLFSCSYDKTIKVW----DLSTFKEIKSFEGVHTKYIKTL 1001
Query: 283 AVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGH 317
A+ + SG D+ I +W + L ++GH
Sbjct: 1002 ALSGRYLFSGGNDQIIYVWD--TETLSMLFNMQGH 1034
Score = 133 (51.9 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 40/161 (24%), Positives = 78/161 (48%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H + LAL+ L+S D+ I +W T L ++ H+D + ++ + ++
Sbjct: 994 HTKYIKTLALSG--RYLFSGGNDQIIYVWDTETLSMLFNM-QGHEDWVLSLHCTASY-LF 1049
Query: 201 TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKE 260
+ S D IK+W S S +D L+ H + +++ + LYSG+ D SI VW+ +
Sbjct: 1050 STSKDNVIKIWDLS----NFSCIDTLKGHWNSVSSCVVK--DRYLYSGSEDNSIKVWDLD 1103
Query: 261 EDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIW 301
+ V + H+ + C+ V ++ + S + D +I++W
Sbjct: 1104 TLE---CVYTIPKSHSLGVKCLMVFNNQIISAAFDGSIKVW 1141
>POMBASE|SPAC630.14c [details] [associations]
symbol:tup12 "transcriptional corepressor Tup12"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043156 "chromatin remodeling in response to cation stress"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] [GO:0071473 "cellular response to cation stress"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC630.14c InterPro:IPR001632 GO:GO:0005829
GO:GO:0003714 GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 PRINTS:PR00319 HOGENOM:HOG000200558
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:U92792 PIR:T38992 RefSeq:NP_592910.2 ProteinModelPortal:Q9UUG8
STRING:Q9UUG8 EnsemblFungi:SPAC630.14c.1 GeneID:2543402
NextBio:20804417 GO:GO:0043156 Uniprot:Q9UUG8
Length = 598
Score = 201 (75.8 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 71/227 (31%), Positives = 103/227 (45%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAH-DDAINAVALSDDGD- 198
H + +L +KD L S S DRT+ +W D + E H DD + V S DG
Sbjct: 387 HEQEIYSLDFSKDGKTLVSGSGDRTVCLW---DVEAGEQKLILHTDDGVTTVMFSPDGQF 443
Query: 199 VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWE 258
+ GS DK I++W S G +LV+ L H + ++A S DG L SG+ D +I +WE
Sbjct: 444 IAAGSLDKVIRIWTSS-G----TLVEQLHGHEESVYSVAFSPDGKYLVSGSLDNTIKLWE 498
Query: 259 KE---------EDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIWRGIDRN 307
+ +G I GH IL + V D + SGS D+TI+ W D
Sbjct: 499 LQCVSNVAPSMYKEGGICKQ-TFTGHKDFILSVTVSPDGKWIISGSKDRTIQFWSP-DSP 556
Query: 308 YTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVW 354
++ L L+GH V +A + N C +GS D ++W
Sbjct: 557 HSQLT-LQGHNNSVISVAVS-PNGHC--------FATGSGDLRARIW 593
Score = 173 (66.0 bits), Expect = 4.7e-10, P = 4.7e-10
Identities = 58/183 (31%), Positives = 88/183 (48%)
Query: 178 ESITNAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINAL 236
ES D + +VA S DG + TG D++I++W K+ + +L H I +L
Sbjct: 339 ESSKREGDLYVRSVAFSPDGKYLATGVEDQQIRIW--DIAQKR--VYRLLTGHEQEIYSL 394
Query: 237 ALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVS---DLVCSGS 293
S DG L SG+ DR++ +W+ E + +++ HT + + S + +GS
Sbjct: 395 DFSKDGKTLVSGSGDRTVCLWDVEAGEQKLIL------HTDDGVTTVMFSPDGQFIAAGS 448
Query: 294 ADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKV 353
DK IRIW + T + L GH V +A S D YLV SGSLD IK+
Sbjct: 449 LDKVIRIWTS---SGTLVEQLHGHEESVYSVAF--------SPDGKYLV-SGSLDNTIKL 496
Query: 354 WQI 356
W++
Sbjct: 497 WEL 499
Score = 152 (58.6 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 43/160 (26%), Positives = 78/160 (48%)
Query: 145 VSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD-VYTGS 203
V ++A + D L + D+ I+IW + + +T H+ I ++ S DG + +GS
Sbjct: 349 VRSVAFSPDGKYLATGVEDQQIRIWDIAQKRVYRLLTG-HEQEIYSLDFSKDGKTLVSGS 407
Query: 204 ADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDD 263
D+ + +W G +K ++ + G+ + S DG + +G+ D+ I +W
Sbjct: 408 GDRTVCLWDVEAGEQK-----LILHTDDGVTTVMFSPDGQFIAAGSLDKVIRIWTSS--- 459
Query: 264 GNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIW 301
G + V L GH +S+ +A D + SGS D TI++W
Sbjct: 460 GTL--VEQLHGHEESVYSVAFSPDGKYLVSGSLDNTIKLW 497
Score = 150 (57.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 70/269 (26%), Positives = 118/269 (43%)
Query: 21 YVSSLALA--GKFLYTGSSDNEVRSWDC---------NTFSSEL-DQEFLSNNNIVAVGK 68
YV S+A + GK+L TG D ++R WD E+ +F + + G
Sbjct: 348 YVRSVAFSPDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGS 407
Query: 69 G-AVKSL--VVLADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLGDRAIKLLMPK 125
G L V ++ H D + + PD Q + +L D+ I++
Sbjct: 408 GDRTVCLWDVEAGEQKLILHTDDGVTTVMFS---PDGQ-FIAAGSL----DKVIRIWTSS 459
Query: 126 NHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRT--------SDFK-- 175
+ + H H ++V ++A + D L S S D TIK+W S +K
Sbjct: 460 GTLVEQLHG------HEESVYSVAFSPDGKYLVSGSLDNTIKLWELQCVSNVAPSMYKEG 513
Query: 176 --CLESITNAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSG 232
C ++ T H D I +V +S DG + +GS D+ I+ W SP + HS + L+ HN+
Sbjct: 514 GICKQTFTG-HKDFILSVTVSPDGKWIISGSKDRTIQFW--SP-DSPHSQL-TLQGHNNS 568
Query: 233 INALALSCDGSVLYSGACDRSIIVWEKEE 261
+ ++A+S +G +G+ D +W E+
Sbjct: 569 VISVAVSPNGHCFATGSGDLRARIWSYED 597
Score = 125 (49.1 bits), Expect = 0.00010, P = 0.00010
Identities = 58/217 (26%), Positives = 94/217 (43%)
Query: 15 LKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSEL----DQE-----FLSNNNI 63
L GH + SL + GK L +GS D V WD +L D F +
Sbjct: 384 LTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEAGEQKLILHTDDGVTTVMFSPDGQF 443
Query: 64 VAVGK-GAVKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLGDRAIKL- 121
+A G V + + L H+ V+ + PD KY +L D IKL
Sbjct: 444 IAAGSLDKVIRIWTSSGTLVEQLHGHEESVYSVAFS-PDG-KYLVSGSL----DNTIKLW 497
Query: 122 -LMPKNHVQIRRHKT---C--TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFK 175
L ++V +K C T+ H D + ++ ++ D + S S DRTI+ W + D
Sbjct: 498 ELQCVSNVAPSMYKEGGICKQTFTGHKDFILSVTVSPDGKWIISGSKDRTIQFW-SPDSP 556
Query: 176 CLESITNAHDDAINAVALSDDGDVY-TGSADKKIKVW 211
+ H++++ +VA+S +G + TGS D + ++W
Sbjct: 557 HSQLTLQGHNNSVISVAVSPNGHCFATGSGDLRARIW 593
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 195 (73.7 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 44/186 (23%), Positives = 92/186 (49%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD-V 199
H + +S +A ++D L+ S S D+TIKIW K ++++ H + + V+ + + +
Sbjct: 87 HKEGISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTL-KGHKEYVFGVSFNPQSNLI 145
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEK 259
+GS D+ +++W + G ++ H+ + + + DG+++ SG+ D ++ +W+
Sbjct: 146 VSGSFDENVRIWDVNTGE----CTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDT 201
Query: 260 EEDDGNIL-VVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHR 318
G +L + G S + + V +G+ D T+R+W + N CL GH+
Sbjct: 202 TT--GQLLNTISTEDGKEVSFVKFSPNGKFVLAGTLDNTLRLW-SYNNNKKCLKTYTGHK 258
Query: 319 GPVKCL 324
C+
Sbjct: 259 NEKYCI 264
Score = 193 (73.0 bits), Expect = 5.7e-13, P = 5.7e-13
Identities = 73/310 (23%), Positives = 142/310 (45%)
Query: 14 TLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAV 71
TLKGH +SS+ + GK+L + S+D ++ W + + ++ + K +
Sbjct: 41 TLKGHLKSISSVKFSPDGKWLASASADKTIKIW--GAYDGKFERTLEGH-------KEGI 91
Query: 72 KSLVVLAD-KLF-SAHQDHKIRVWKINNQE-----PDHQKYTRLATLPTLGDRAIKLLMP 124
+ D KL SA D I++W + + + H++Y + + +
Sbjct: 92 SDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFD 151
Query: 125 KNHVQIRRHKT--CTWV--HHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESI 180
+N V+I T CT + H D V+ + +D TL+ S S+D T++IW T+ + L +I
Sbjct: 152 EN-VRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTI 210
Query: 181 TNAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSG---INAL 236
+ ++ V S +G V G+ D +++W S N K L N +
Sbjct: 211 STEDGKEVSFVKFSPNGKFVLAGTLDNTLRLW--SYNNNKKCLKTYTGHKNEKYCIFSTF 268
Query: 237 ALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAV--VSDLVCSGSA 294
+++C G + +G+ D I ++ + + +V L GH +L +A +++ SG+
Sbjct: 269 SVTC-GKWIVTGSEDNLIYIYNLQTRE----IVQTLAGHEDVVLTVACHPTENIIASGAL 323
Query: 295 --DKTIRIWR 302
D++++IW+
Sbjct: 324 EKDRSVKIWK 333
Score = 164 (62.8 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 54/217 (24%), Positives = 95/217 (43%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD-V 199
H+ ++S++ + D L S S D+TIKIW D K E H + I+ +A S D +
Sbjct: 45 HLKSISSVKFSPDGKWLASASADKTIKIWGAYDGK-FERTLEGHKEGISDIAWSQDSKLI 103
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEK 259
+ S DK IK+W G +V L+ H + ++ + +++ SG+ D ++ +W+
Sbjct: 104 CSASDDKTIKIWDVESGK----MVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDV 159
Query: 260 EEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIWRGIDRNYTCLAVLEGH 317
+ ++ H+ + + D LV SGS D T+RIW L +
Sbjct: 160 NTGECTKMI----SAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQL--LNTISTE 213
Query: 318 RGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVW 354
G N + V +G+LD +++W
Sbjct: 214 DGKEVSFVKFSPNGK--------FVLAGTLDNTLRLW 242
Score = 143 (55.4 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 52/181 (28%), Positives = 86/181 (47%)
Query: 177 LESITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINAL 236
L+ H +I++V S DG + SA + + G LE H GI+ +
Sbjct: 38 LKYTLKGHLKSISSVKFSPDGK-WLASASADKTI--KIWGAYDGKFERTLEGHKEGISDI 94
Query: 237 ALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAV--VSDLVCSGSA 294
A S D ++ S + D++I +W+ E G + V L+GH + + ++ S+L+ SGS
Sbjct: 95 AWSQDSKLICSASDDKTIKIWDVES--GKM--VKTLKGHKEYVFGVSFNPQSNLIVSGSF 150
Query: 295 DKTIRIWRGIDRNY-TCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKV 353
D+ +RIW D N C ++ H PV + +R D + LV SGS D +++
Sbjct: 151 DENVRIW---DVNTGECTKMISAHSDPV----TGVHFNR-DGT----LVVSGSYDGTVRI 198
Query: 354 W 354
W
Sbjct: 199 W 199
Score = 129 (50.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 42/145 (28%), Positives = 70/145 (48%)
Query: 215 PGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRG 274
P + L L+ H I+++ S DG L S + D++I +W DG L G
Sbjct: 31 PQTPNYILKYTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAY--DGKF--ERTLEG 86
Query: 275 HTKSILCMAVVSD--LVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDR 332
H + I +A D L+CS S DKTI+IW ++ + L+GH+ V ++
Sbjct: 87 HKEGISDIAWSQDSKLICSASDDKTIKIW-DVESG-KMVKTLKGHKEYVFGVSF------ 138
Query: 333 CDSSDTSYLVCSGSLDCDIKVWQIS 357
+ S L+ SGS D ++++W ++
Sbjct: 139 ---NPQSNLIVSGSFDENVRIWDVN 160
Score = 118 (46.6 bits), Expect = 0.00024, P = 0.00024
Identities = 38/122 (31%), Positives = 55/122 (45%)
Query: 237 ALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSA 294
++S S LY + E N ++ L+GH KSI + D + S SA
Sbjct: 7 SMSSSSSYLYQEQQQQQPQQTESIPQTPNYILKYTLKGHLKSISSVKFSPDGKWLASASA 66
Query: 295 DKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVW 354
DKTI+IW D + LEGH+ + +A + D S L+CS S D IK+W
Sbjct: 67 DKTIKIWGAYDGKFE--RTLEGHKEGISDIAWSQD---------SKLICSASDDKTIKIW 115
Query: 355 QI 356
+
Sbjct: 116 DV 117
>SGD|S000004951 [details] [associations]
symbol:LST8 "Protein required for the transport of Gap1p to
the cell surface" species:4932 "Saccharomyces cerevisiae"
[GO:0030950 "establishment or maintenance of actin cytoskeleton
polarity" evidence=IMP] [GO:0030295 "protein kinase activator
activity" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005773 "vacuole" evidence=IEA] [GO:0031234 "extrinsic to
internal side of plasma membrane" evidence=IDA] [GO:0001558
"regulation of cell growth" evidence=IPI] [GO:0005774 "vacuolar
membrane" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IMP] [GO:0010008 "endosome membrane" evidence=IDA]
[GO:0000139 "Golgi membrane" evidence=IDA] [GO:0031505 "fungal-type
cell wall organization" evidence=IMP] [GO:0031929 "TOR signaling
cascade" evidence=IC;IMP] [GO:0016020 "membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0031930
"mitochondria-nucleus signaling pathway" evidence=IMP] [GO:0031932
"TORC2 complex" evidence=IPI] [GO:0031931 "TORC1 complex"
evidence=IPI] [GO:0006810 "transport" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000004951 GO:GO:0005774 GO:GO:0000139 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0001558
GO:GO:0031929 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BK006947 GO:GO:0030295 GO:GO:0010008
GO:GO:0031930 GO:GO:0031505 KO:K07034 GO:GO:0031931 GO:GO:0030950
RefSeq:NP_014399.3 GeneID:855736 KEGG:sce:YNR002C GO:GO:0031932
GO:GO:0031234 EMBL:X77114 RefSeq:NP_014392.3 GeneID:855726
KEGG:sce:YNL006W KO:K08266 GeneTree:ENSGT00390000014795
HOGENOM:HOG000208395 OMA:NNKGNCY EMBL:Z71282 PIR:S45461
ProteinModelPortal:P41318 SMR:P41318 DIP:DIP-5318N IntAct:P41318
MINT:MINT-562844 STRING:P41318 PaxDb:P41318 PeptideAtlas:P41318
EnsemblFungi:YNL006W CYGD:YNL006w OrthoDB:EOG4GF6PT NextBio:980099
Genevestigator:P41318 GermOnline:YNL006W Uniprot:P41318
Length = 303
Score = 192 (72.6 bits), Expect = 4.2e-13, P = 4.2e-13
Identities = 74/295 (25%), Positives = 136/295 (46%)
Query: 81 LFSAHQDHKIRVWK----INNQEPDHQKYTRLATLPTLGDRAIKLLMPKNHVQIRRH--K 134
L SA DH IR W+ + ++ H +++ L D+ KLL H +R + +
Sbjct: 5 LVSAGYDHTIRFWEALTGVCSRTIQHSD-SQVNRLEITNDK--KLLATAGHQNVRLYDIR 61
Query: 135 T------CTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITN-AHDDA 187
T ++ H V++++ +D + + S D TIK+W D + N H+
Sbjct: 62 TTNPNPVASFEGHRGNVTSVSFQQDNRWMVTSSEDGTIKVW---DVRSPSIPRNYKHNAP 118
Query: 188 INAVALS-DDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLY 246
+N V + + G++ + D I++W H L ++ + +L+++ DGS+L
Sbjct: 119 VNEVVIHPNQGELISCDRDGNIRIWDLGENQCTHQLTP---EDDTSLQSLSMASDGSMLA 175
Query: 247 SGACDRSIIVWE--KEEDDGNILVVGALRGHTKSILCMAVVSDL--VCSGSADKTIRIWR 302
+ + VWE D ++ V R H+ I + + SD+ + + SAD T R+W
Sbjct: 176 AANTKGNCYVWEMPNHTDASHLKPVTKFRAHSTYITRILLSSDVKHLATCSADHTARVW- 234
Query: 303 GIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQIS 357
ID ++ L+GH+ V D S+D++YLV + S D +++W +S
Sbjct: 235 SIDDDFKLETTLDGHQRWVW--------DCAFSADSAYLVTASS-DHYVRLWDLS 280
Score = 124 (48.7 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 58/260 (22%), Positives = 107/260 (41%)
Query: 2 HNLSVVDHHCLTTLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSELDQEFLS 59
+++ + + + + +GH V+S++ +++ T S D ++ WD S + + +
Sbjct: 58 YDIRTTNPNPVASFEGHRGNVTSVSFQQDNRWMVTSSEDGTIKVWDVR--SPSIPRNYKH 115
Query: 60 NNNIVAVGKGAVKSLVVLADK--LFSAHQDHKIRVWKINNQEPDHQKY----TRLATLPT 113
N V +V+ ++ L S +D IR+W + + HQ T L +L
Sbjct: 116 N--------APVNEVVIHPNQGELISCDRDGNIRIWDLGENQCTHQLTPEDDTSLQSLSM 167
Query: 114 LGDRAIKLL-----------MPKNHVQIRRHKTCTWVH-HVDAVSALALTKDETLLYSVS 161
D ++ MP NH K T H ++ + L+ D L + S
Sbjct: 168 ASDGSMLAAANTKGNCYVWEMP-NHTDASHLKPVTKFRAHSTYITRILLSSDVKHLATCS 226
Query: 162 WDRTIKIWRTSD-FKCLESITNAHDDAINAVALS-DDGDVYTGSADKKIKVWRRSPGNKK 219
D T ++W D FK LE+ + H + A S D + T S+D +++W S
Sbjct: 227 ADHTARVWSIDDDFK-LETTLDGHQRWVWDCAFSADSAYLVTASSDHYVRLWDLST---- 281
Query: 220 HSLVDVLERHNSGINALALS 239
+V H+ G +AL+
Sbjct: 282 REIVRQYGGHHKGAVCVALN 301
Score = 120 (47.3 bits), Expect = 0.00012, P = 0.00012
Identities = 45/194 (23%), Positives = 82/194 (42%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H V+ + + ++ L S D I+IW + +C +T D ++ +++++ DG +
Sbjct: 115 HNAPVNEVVIHPNQGELISCDRDGNIRIWDLGENQCTHQLTPEDDTSLQSLSMASDGSML 174
Query: 201 TGSADK-KIKVWRRSPGNKKHSLVDVLE--RHNSGINALALSCDGSVLYSGACDRSIIVW 257
+ K VW L V + H++ I + LS D L + + D + VW
Sbjct: 175 AAANTKGNCYVWEMPNHTDASHLKPVTKFRAHSTYITRILLSSDVKHLATCSADHTARVW 234
Query: 258 EKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIW----RGIDRNYTCL 311
++D + L GH + + A +D + + S+D +R+W R I R Y
Sbjct: 235 SIDDD---FKLETTLDGHQRWVWDCAFSADSAYLVTASSDHYVRLWDLSTREIVRQYG-- 289
Query: 312 AVLEGHRGPVKCLA 325
GH C+A
Sbjct: 290 ----GHHKGAVCVA 299
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 199 (75.1 bits), Expect = 5.1e-13, P = 5.1e-13
Identities = 66/263 (25%), Positives = 125/263 (47%)
Query: 11 CLTTLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGK 68
CL L+GH + V S++ + + L + S D V+ WD T S Q L ++ +
Sbjct: 288 CLQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSL---QHTLEGHSDL---- 340
Query: 69 GAVKSLVVLAD-KLFSAHQDHKIRVW-----KINNQEPDHQKYTRLATLPTLGDRAIKLL 122
V+S++ D +L ++ D +++W + + H+ + R + + + + +
Sbjct: 341 --VRSVIFSHDSRLLASASDSTVKIWDTGTGSLQHTLEGHRDWVR-SVIFSHDSQLLASA 397
Query: 123 MPKNHVQIRRHKTCTWVH----HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLE 178
+ V+I T + H H D V ++ + D LL S S D T+KIW T L+
Sbjct: 398 SDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGS-LQ 456
Query: 179 SITNAHDDAINAVALSDDGDVY-TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALA 237
H D + +V S D + + S D+ +++W G+ KH+L E H+S + +++
Sbjct: 457 HTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTL----EGHSSLVTSVS 512
Query: 238 LSCDGSVLYSGACDRSIIVWEKE 260
S D +L S + D+++ +W+ E
Sbjct: 513 FSHDSRLLASASNDQTVRIWDIE 535
Score = 198 (74.8 bits), Expect = 6.6e-13, P = 6.6e-13
Identities = 65/252 (25%), Positives = 109/252 (43%)
Query: 81 LFSAHQDHKIRVWKINNQEPDH--QKYTRLATLPTLG-DRAIKLLMPKNHVQIRRHKTCT 137
L SA D +++W H + ++ L D + + V+I T +
Sbjct: 311 LASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFSHDSRLLASASDSTVKIWDTGTGS 370
Query: 138 WVH----HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVAL 193
H H D V ++ + D LL S S D T+KIW T L+ H D + +V
Sbjct: 371 LQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGS-LQHTLEGHRDWVRSVIF 429
Query: 194 SDDGDVY-TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDR 252
S D + + S D +K+W G+ +H+L E H + ++ S D +L S + DR
Sbjct: 430 SHDSQLLASASDDSTVKIWDTGTGSLQHTL----EGHRDWVRSVIFSHDSRLLASASDDR 485
Query: 253 SIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIW----RGIDR 306
++ +W+ E+ L GH+ + ++ D L+ S S D+T+RIW R +
Sbjct: 486 TVRIWDTEKGSHK----HTLEGHSSLVTSVSFSHDSRLLASASNDQTVRIWDIEARSLQH 541
Query: 307 NYTCLAVLEGHR 318
+ A +E R
Sbjct: 542 TFDLDATIEAMR 553
Score = 120 (47.3 bits), Expect = 0.00035, P = 0.00035
Identities = 47/182 (25%), Positives = 76/182 (41%)
Query: 177 LESITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINAL 236
L+ H D + +V S D + ++D V G SL LE H + ++
Sbjct: 371 LQHTLEGHRDWVRSVIFSHDSQLLASASDDST-VKIWDTGTG--SLQHTLEGHRDWVRSV 427
Query: 237 ALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSA 294
S D +L S + D ++ +W D G + L GH + + D L+ S S
Sbjct: 428 IFSHDSQLLASASDDSTVKIW----DTGTGSLQHTLEGHRDWVRSVIFSHDSRLLASASD 483
Query: 295 DKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVW 354
D+T+RIW ++ LEGH V ++ + D S L+ S S D +++W
Sbjct: 484 DRTVRIWDTEKGSHK--HTLEGHSSLVTSVSFSHD---------SRLLASASNDQTVRIW 532
Query: 355 QI 356
I
Sbjct: 533 DI 534
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 192 (72.6 bits), Expect = 6.8e-13, P = 6.8e-13
Identities = 56/225 (24%), Positives = 105/225 (46%)
Query: 134 KTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVAL 193
K + H ++ +S +A + D + L S S D+T+K+W KCL+++ H D +
Sbjct: 74 KKTLYGHSLE-ISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTL-KGHSDFVFCCDF 131
Query: 194 SDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDR 252
+ + + +GS D+ +K+W G + L H+ I+A+ +C+GS++ SG+ D
Sbjct: 132 NPPSNLIVSGSFDESVKIWEVKTGK----CLKTLSAHSDPISAVNFNCNGSLIVSGSYDG 187
Query: 253 SIIVWEKEEDDGNILVVGALRGHTK-SILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCL 311
+W+ G L A G+ S + + + + + D T+++W R CL
Sbjct: 188 LCRIWDAAS--GQCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLW-DYSRG-RCL 243
Query: 312 AVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
GH+ CL A+ + ++V SGS D + +W +
Sbjct: 244 KTYTGHKNEKYCLFASFS-----VTGRKWVV-SGSEDNMVYIWNL 282
Score = 157 (60.3 bits), Expect = 8.7e-09, P = 8.7e-09
Identities = 48/144 (33%), Positives = 71/144 (49%)
Query: 215 PGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRG 274
P ++L L H++ I+++ S +G L S A D II+W DGN L G
Sbjct: 24 PQKPNYALRLTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAY--DGNCKKT--LYG 79
Query: 275 HTKSILCMAVVSDL--VCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDR 332
H+ I +A SD + S S DKT+++W R+ CL L+GH V C
Sbjct: 80 HSLEISDVAWSSDSSRLVSASDDKTLKVWDM--RSGKCLKTLKGHSDFVFC--------- 128
Query: 333 CDSSDTSYLVCSGSLDCDIKVWQI 356
CD + S L+ SGS D +K+W++
Sbjct: 129 CDFNPPSNLIVSGSFDESVKIWEV 152
Score = 154 (59.3 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 64/305 (20%), Positives = 134/305 (43%)
Query: 14 TLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAV 71
TL GH++ +SS+ + G++L + ++D + W + + ++ + + A
Sbjct: 34 TLAGHSAAISSVKFSPNGEWLASSAADALIIIW--GAYDGNCKKTLYGHS--LEISDVAW 89
Query: 72 KSLVVLADKLFSAHQDHKIRVWKINNQE-----PDHQKYTRLATLPTLGDRAIKLLMPKN 126
S + +L SA D ++VW + + + H + + + ++
Sbjct: 90 SSD---SSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDES 146
Query: 127 HVQIRRHKT--C--TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITN 182
V+I KT C T H D +SA+ + +L+ S S+D +IW + +CL ++ +
Sbjct: 147 -VKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLAD 205
Query: 183 AHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCD 241
+ ++ V S +G + T + D +K+W S G + ++ + S
Sbjct: 206 EGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTG--HKNEKYCLFASFSVT 263
Query: 242 GSV-LYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAV--VSDLVCSGSA--DK 296
G + SG+ D + +W + + +V L+GHT ++ A +++ S + DK
Sbjct: 264 GRKWVVSGSEDNMVYIWNLQTKE----IVQRLQGHTDVVISAACHPTKNIIASAALENDK 319
Query: 297 TIRIW 301
TI++W
Sbjct: 320 TIKVW 324
Score = 140 (54.3 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 55/222 (24%), Positives = 90/222 (40%)
Query: 137 TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDD 196
T H A+S++ + + L S + D I IW D C +++ H I+ VA S D
Sbjct: 34 TLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYG-HSLEISDVAWSSD 92
Query: 197 GD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSII 255
+ + S DK +KVW G + L+ H+ + + +++ SG+ D S+
Sbjct: 93 SSRLVSASDDKTLKVWDMRSGK----CLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVK 148
Query: 256 VWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLE 315
+WE + G L + S + L+ SGS D RIW CL L
Sbjct: 149 IWEVKT--GKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQ--CLRTLA 204
Query: 316 GHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQIS 357
P N + Y++ + +LD +K+W S
Sbjct: 205 DEGNPPVSFVKFSPNGK-------YIL-TATLDNTLKLWDYS 238
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 192 (72.6 bits), Expect = 7.4e-13, P = 7.4e-13
Identities = 72/305 (23%), Positives = 139/305 (45%)
Query: 14 TLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAV 71
TL GH VSS+ + G++L + S+D ++ W + + ++ +S + + + A
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW--GAYDGKFEKT-ISGHKL-GISDVAW 95
Query: 72 KSLVVLADKLFSAHQDHKIRVWKINNQE-----PDHQKYTRLATLPTLGDRAIKLLMPKN 126
S ++ L SA D +++W +++ + H Y + + ++
Sbjct: 96 SSD---SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 152
Query: 127 HVQIRRHKT--C--TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITN 182
V+I KT C T H D VSA+ +D +L+ S S+D +IW T+ +CL+++ +
Sbjct: 153 -VRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 211
Query: 183 AHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCD 241
+ ++ V S +G + + D +K+W S G K + I A
Sbjct: 212 DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG-KCLKTYTCHKNEKYCIFANFSVTG 270
Query: 242 GSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAV--VSDLVCSGSA--DKT 297
G + SG+ D + +W + + VV L+GHT ++ A +++ S + DKT
Sbjct: 271 GKWIVSGSEDNLVYIWNLQTKE----VVQKLQGHTDVVISTACHPTENIIASAALENDKT 326
Query: 298 IRIWR 302
I++W+
Sbjct: 327 IKLWK 331
Score = 136 (52.9 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 42/145 (28%), Positives = 67/145 (46%)
Query: 214 SPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALR 273
+P ++L L H ++++ S +G L S + D+ I +W DG +
Sbjct: 29 APVKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY--DGKF--EKTIS 84
Query: 274 GHTKSILCMAVVSD--LVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDND 331
GH I +A SD L+ S S DKT++IW + CL L+GH V C
Sbjct: 85 GHKLGISDVAWSSDSNLLVSASDDKTLKIW-DVSSG-KCLKTLKGHSNYVFC-------- 134
Query: 332 RCDSSDTSYLVCSGSLDCDIKVWQI 356
C+ + S L+ SGS D +++W +
Sbjct: 135 -CNFNPQSNLIVSGSFDESVRIWDV 158
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 183 (69.5 bits), Expect = 7.8e-13, Sum P(2) = 7.8e-13
Identities = 45/145 (31%), Positives = 75/145 (51%)
Query: 163 DRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHS 221
DR ++W T ++ L I H +N + + V TGSAD+ +++W GN
Sbjct: 366 DRVARLWATDHYQPLR-IFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGN---- 420
Query: 222 LVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILC 281
V + H I++L S +G L +GA D +++W D G+ L+VG L+GHT ++
Sbjct: 421 CVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLW----DIGHGLMVGELKGHTDTVCS 476
Query: 282 MAVVSD--LVCSGSADKTIRIWRGI 304
+ D ++ SGS D T+R+W +
Sbjct: 477 LRFSRDGEILASGSMDNTVRLWDAV 501
Score = 123 (48.4 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 30/119 (25%), Positives = 59/119 (49%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD-V 199
H+ V+ + + + S DRT+++W + C+ T H I+++ S +G +
Sbjct: 386 HLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTG-HKGPIHSLTFSPNGRFL 444
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWE 258
TG+ D ++ +W G +V L+ H + +L S DG +L SG+ D ++ +W+
Sbjct: 445 ATGATDGRVLLWDIGHG----LMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 499
Score = 117 (46.2 bits), Expect = 0.00069, P = 0.00069
Identities = 47/185 (25%), Positives = 78/185 (42%)
Query: 180 ITNAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALAL 238
I H + + S D + + + S D +++W LV + HN +
Sbjct: 298 ILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFT---CLVGY-KGHNYPVWDTQF 353
Query: 239 SCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVV--SDLVCSGSADK 296
S G SG DR +W D L + A GH + C S+ V +GSAD+
Sbjct: 354 SPYGYYFVSGGHDRVARLWAT--DHYQPLRIFA--GHLADVNCTRFHPNSNYVATGSADR 409
Query: 297 TIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
T+R+W ++ N C+ + GH+GP+ L + N R + +G+ D + +W I
Sbjct: 410 TVRLWDVLNGN--CVRIFTGHKGPIHSLTFS-PNGR--------FLATGATDGRVLLWDI 458
Query: 357 SFPLV 361
L+
Sbjct: 459 GHGLM 463
Score = 56 (24.8 bits), Expect = 7.8e-13, Sum P(2) = 7.8e-13
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 12 LTTLKGHNS--YVSSLALAGKFLYTGSSDNEVRSWDCNTFS 50
L L GH+ Y +S + +L + S D VR W TF+
Sbjct: 296 LKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFT 336
Score = 39 (18.8 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 11/45 (24%), Positives = 21/45 (46%)
Query: 53 LDQEFLSNNNIVAVGKGAVKSLVVLADK--LFSAHQDHKIRVWKI 95
+D++ S I+ G V D+ L S+ +D +R+W +
Sbjct: 288 MDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSL 332
>CGD|CAL0002120 [details] [associations]
symbol:orf19.3862 species:5476 "Candida albicans" [GO:0010008
"endosome membrane" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0031931 "TORC1 complex" evidence=IEA] [GO:0031932
"TORC2 complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0031234 "extrinsic to internal side of plasma membrane"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0001558 "regulation
of cell growth" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0031929 "TOR signaling cascade" evidence=IEA] [GO:0031505
"fungal-type cell wall organization" evidence=IEA] [GO:0031930
"mitochondria-nucleus signaling pathway" evidence=IEA] [GO:0030950
"establishment or maintenance of actin cytoskeleton polarity"
evidence=IEA] [GO:0000070 "mitotic sister chromatid segregation"
evidence=IEA] [GO:0030295 "protein kinase activator activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0002120 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000125
EMBL:AACQ01000124 KO:K08266 HOGENOM:HOG000208395 RefSeq:XP_441049.1
RefSeq:XP_713529.1 ProteinModelPortal:Q59V90 STRING:Q59V90
GeneID:3644824 GeneID:6335359 KEGG:cal:CaO19.11343
KEGG:cal:CaO19.3862 Uniprot:Q59V90
Length = 328
Score = 188 (71.2 bits), Expect = 8.1e-13, Sum P(2) = 8.1e-13
Identities = 62/227 (27%), Positives = 111/227 (48%)
Query: 137 TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITN-AHDDAINAVALS- 194
T+ H + V++L D + + S D T+K+W D + N H +N V +
Sbjct: 95 TFEGHKNNVTSLQFQADNKWMVTSSEDGTVKVW---DVRSPSVQRNYKHQCPVNEVVIHP 151
Query: 195 DDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSI 254
+ G++ + D I+VW + H L+ + IN+L+++ DGS+L +G +
Sbjct: 152 NQGELISCDQDGNIRVWDLGENSCTHHLIP---EDDVPINSLSVASDGSMLVAGNNKGNC 208
Query: 255 IVWEKEED-DGNILV-VGALRGHTKSILCMAVVSDL--VCSGSADKTIRIWRGIDRNYTC 310
VW+ + D +L V R H+K I + + +D+ + + SAD T RIW ++N+
Sbjct: 209 YVWKMQNQRDATVLTPVTKFRSHSKYITRVLLSTDMKHLATCSADHTARIW-STEQNFNL 267
Query: 311 LAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQIS 357
L+GH+ V D S+D++YLV + S D +++W +S
Sbjct: 268 ETTLQGHQRWVW--------DCAFSADSAYLVTACS-DHYVRLWDLS 305
Score = 124 (48.7 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 42/190 (22%), Positives = 81/190 (42%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H V+ + + ++ L S D I++W + C + D IN+++++ DG +
Sbjct: 140 HQCPVNEVVIHPNQGELISCDQDGNIRVWDLGENSCTHHLIPEDDVPINSLSVASDGSML 199
Query: 201 TGSADK-KIKVWRRSPGNKKHSLVDVLE--RHNSGINALALSCDGSVLYSGACDRSIIVW 257
+K VW+ L V + H+ I + LS D L + + D + +W
Sbjct: 200 VAGNNKGNCYVWKMQNQRDATVLTPVTKFRSHSKYITRVLLSTDMKHLATCSADHTARIW 259
Query: 258 EKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIWRGIDRNYTCLAVLE 315
E+ N + L+GH + + A +D + + +D +R+W + + T
Sbjct: 260 STEQ---NFNLETTLQGHQRWVWDCAFSADSAYLVTACSDHYVRLW-DLSNSETVRQYNG 315
Query: 316 GHRGPVKCLA 325
H+G V C+A
Sbjct: 316 HHKGAV-CVA 324
Score = 39 (18.8 bits), Expect = 8.1e-13, Sum P(2) = 8.1e-13
Identities = 8/13 (61%), Positives = 8/13 (61%)
Query: 81 LFSAHQDHKIRVW 93
L SA DH IR W
Sbjct: 5 LASAGYDHTIRFW 17
>UNIPROTKB|Q9UNX4 [details] [associations]
symbol:WDR3 "WD repeat-containing protein 3" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0031965 "nuclear membrane"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 UniGene:Hs.310809
InterPro:IPR007148 Pfam:PF04003 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD EMBL:AF083217 IPI:IPI00009471 RefSeq:NP_006775.1
ProteinModelPortal:Q9UNX4 SMR:Q9UNX4 IntAct:Q9UNX4
MINT:MINT-1401247 STRING:Q9UNX4 PhosphoSite:Q9UNX4 DMDM:12230773
SWISS-2DPAGE:Q9UNX4 PaxDb:Q9UNX4 PeptideAtlas:Q9UNX4 PRIDE:Q9UNX4
Ensembl:ENST00000349139 GeneID:10885 KEGG:hsa:10885 UCSC:uc010oxe.1
CTD:10885 GeneCards:GC01P118472 HGNC:HGNC:12755 HPA:HPA027509
MIM:604737 neXtProt:NX_Q9UNX4 PharmGKB:PA37359 HOVERGEN:HBG013192
InParanoid:Q9UNX4 OrthoDB:EOG412M4S PhylomeDB:Q9UNX4 ChiTaRS:WDR3
GenomeRNAi:10885 NextBio:41331 ArrayExpress:Q9UNX4 Bgee:Q9UNX4
CleanEx:HS_WDR3 Genevestigator:Q9UNX4 GermOnline:ENSG00000065183
Uniprot:Q9UNX4
Length = 943
Score = 163 (62.4 bits), Expect = 8.2e-13, Sum P(2) = 8.2e-13
Identities = 67/278 (24%), Positives = 130/278 (46%)
Query: 94 KINNQEPDHQKYTRLATLPTLGDRAIKL--LMPK--NHVQIRRHKTCTWVHHVDAVSALA 149
KI + + H + L + L + ++L L P +R + H D V L+
Sbjct: 364 KIKSFDLIHSPHGELKAVFLLQNNLVELYSLNPSLPTPQPVRTSRITIGGHRSD-VRTLS 422
Query: 150 LTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSADKKIK 209
+ D + S + D +IKIW S +C+ ++T + A+ + + D V G+ K++
Sbjct: 423 FSSDNIAVLSAAAD-SIKIWNRSTLQCIRTMTCEY--ALCSFFVPGDRQVVIGTKTGKLQ 479
Query: 210 VWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKE--EDDGNI- 266
++ + GN L++ ++ H+ + +++LS D +G D+S+ W+ E +D+ +
Sbjct: 480 LYDLASGN----LLETIDAHDGALWSMSLSPDQRGFVTGGADKSVKFWDFELVKDENSTQ 535
Query: 267 --LVVGALRGHT--KSILCMAVVSD--LVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGP 320
L V R + +LC++ + L+ D T++I+ +D L+ L GH+ P
Sbjct: 536 KRLSVKQTRTLQLDEDVLCVSYSPNQKLLAVSLLDCTVKIFY-VDTLKFFLS-LYGHKLP 593
Query: 321 VKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQISF 358
V C+ D S L+ +GS D ++K+W + F
Sbjct: 594 VICM---------DISHDGALIATGSADRNVKIWGLDF 622
Score = 163 (62.4 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 72/303 (23%), Positives = 128/303 (42%)
Query: 14 TLKGHNSYVSSLALAG-KFLYTGSSDNEVRSWD-----C-NTFSSE--LDQEFLSNNNIV 64
T+ GH S V +L+ + ++ + ++ W+ C T + E L F+ + V
Sbjct: 410 TIGGHRSDVRTLSFSSDNIAVLSAAADSIKIWNRSTLQCIRTMTCEYALCSFFVPGDRQV 469
Query: 65 AVGKGAVK-SLVVLAD-KLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLGDRAIKLL 122
+G K L LA L H +W ++ PD + + ++ +L+
Sbjct: 470 VIGTKTGKLQLYDLASGNLLETIDAHDGALWSMS-LSPDQRGFVTGGADKSVKFWDFELV 528
Query: 123 MPKNHVQIRRHKTCTWVHHVDA-VSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESIT 181
+N Q R T +D V ++ + ++ LL D T+KI+ K S+
Sbjct: 529 KDENSTQKRLSVKQTRTLQLDEDVLCVSYSPNQKLLAVSLLDCTVKIFYVDTLKFFLSLY 588
Query: 182 NAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSC 240
H + + +S DG + TGSAD+ +K+W G+ SL H+ + L
Sbjct: 589 G-HKLPVICMDISHDGALIATGSADRNVKIWGLDFGDCHKSLF----AHDDSVMYLQFVP 643
Query: 241 DGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVV--SDLVCSGSADKTI 298
+ ++ D I W+ ++ + + L GH + I C+AV D V S S DK++
Sbjct: 644 KSHLFFTAGKDHKIKQWDADKFEH----IQTLEGHHQEIWCLAVSPSGDYVVSSSHDKSL 699
Query: 299 RIW 301
R+W
Sbjct: 700 RLW 702
Score = 132 (51.5 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 36/123 (29%), Positives = 59/123 (47%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H V + ++ D L+ + S DR +KIW C +S+ AHDD++ + ++
Sbjct: 590 HKLPVICMDISHDGALIATGSADRNVKIWGLDFGDCHKSLF-AHDDSVMYLQFVPKSHLF 648
Query: 201 -TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEK 259
T D KIK W K + LE H+ I LA+S G + S + D+S+ +WE+
Sbjct: 649 FTAGKDHKIKQWDAD----KFEHIQTLEGHHQEIWCLAVSPSGDYVVSSSHDKSLRLWER 704
Query: 260 EED 262
+
Sbjct: 705 TRE 707
Score = 116 (45.9 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 54/227 (23%), Positives = 101/227 (44%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCL--ESITNAHDDAINAVALSDDGD 198
H A+ +++L+ D+ + D+++K W DF+ + E+ T L D D
Sbjct: 495 HDGALWSMSLSPDQRGFVTGGADKSVKFW---DFELVKDENSTQKRLSVKQTRTLQLDED 551
Query: 199 VY--TGSADKKIKVWRRSPGNKKHSLVDVLE------RHNSGINALALSCDGSVLYSGAC 250
V + S ++K+ K VD L+ H + + +S DG+++ +G+
Sbjct: 552 VLCVSYSPNQKLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDISHDGALIATGSA 611
Query: 251 DRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVV--SDLVCSGSADKTIRIWRGIDRNY 308
DR++ +W + D + +L H S++ + V S L + D I+ W D+ +
Sbjct: 612 DRNVKIWGLDFGDCH----KSLFAHDDSVMYLQFVPKSHLFFTAGKDHKIKQWDA-DK-F 665
Query: 309 TCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQ 355
+ LEGH + CLA + D Y+V S S D +++W+
Sbjct: 666 EHIQTLEGHHQEIWCLAVSPSGD--------YVV-SSSHDKSLRLWE 703
Score = 85 (35.0 bits), Expect = 8.2e-13, Sum P(2) = 8.2e-13
Identities = 18/38 (47%), Positives = 23/38 (60%)
Query: 10 HCLTTLKGHNSYVSSLALAG--KFLYTGSSDNEVRSWD 45
HC T+ GH + V L L K L TG+SD+E+R WD
Sbjct: 182 HCFKTMVGHRTEVWGLVLLSEEKRLITGASDSELRVWD 219
Score = 53 (23.7 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 23/90 (25%), Positives = 43/90 (47%)
Query: 14 TLKGHNSYVSSLA---LAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGA 70
T GH + +++L L G+ L +GS D ++ WD S L + L + K A
Sbjct: 102 TFNGHKAAITTLKYDQLGGR-LASGSKDTDIIVWDVIN-ESGLYR--LKGH------KDA 151
Query: 71 VKSLVVLADK--LFSAHQDHKIRVWKINNQ 98
+ + L +K L ++ +D ++ W ++ Q
Sbjct: 152 ITQALFLREKNLLVTSGKDTMVKWWDLDTQ 181
>TAIR|locus:2057381 [details] [associations]
symbol:emb1345 "AT2G26060" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0009793 "embryo development
ending in seed dormancy" evidence=NAS] [GO:0000394 "RNA splicing,
via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0009086 "methionine biosynthetic process" evidence=RCA]
[GO:0010048 "vernalization response" evidence=RCA] [GO:0048573
"photoperiodism, flowering" evidence=RCA] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AC004747 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:AY093154
EMBL:AY085277 EMBL:BT003394 IPI:IPI00536484 PIR:T02617
RefSeq:NP_565615.1 UniGene:At.38940 ProteinModelPortal:O80990
SMR:O80990 PaxDb:O80990 PRIDE:O80990 EnsemblPlants:AT2G26060.1
GeneID:817147 KEGG:ath:AT2G26060 TAIR:At2g26060 InParanoid:O80990
PhylomeDB:O80990 ProtClustDB:CLSN2917143 ArrayExpress:O80990
Genevestigator:O80990 Uniprot:O80990
Length = 352
Score = 192 (72.6 bits), Expect = 9.2e-13, P = 9.2e-13
Identities = 61/233 (26%), Positives = 104/233 (44%)
Query: 86 QDHKIRVWKIN-NQEPDHQKYTRLATLPTLGDRAIKLLMPKNHVQIRRHKTCTWV---HH 141
+ H RVW + N H GD +++ + + R TC V H
Sbjct: 17 EGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSS---LSRSWTCKTVLEETH 73
Query: 142 VDAVSALALTKDETLLYSVSWDRTIKIWRT--SDFKCLESITNAHDDAINAVALSDDGD- 198
V + A + LL + S+D T IW+ S+F+C+ ++ H++ + +V+ + G
Sbjct: 74 TRTVRSCAWSPSGQLLATASFDGTTGIWKNYGSEFECISTL-EGHENEVKSVSWNASGSC 132
Query: 199 VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWE 258
+ T S DK + +W GN+ + VL H + + VL+S + D +I VW
Sbjct: 133 LATCSRDKSVWIWEVLEGNE-YDCAAVLTGHTQDVKMVQWHPTMDVLFSCSYDNTIKVWW 191
Query: 259 KEEDDGNILVVGAL----RGHTKSILCMA--VVSDLVCSGSADKTIRIWRGID 305
E+DDG V L GH+ ++ ++ D + + S D T++IW G D
Sbjct: 192 SEDDDGEYQCVQTLGESNNGHSSTVWSISFNAAGDKMVTCSDDLTLKIW-GTD 243
Score = 126 (49.4 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 41/156 (26%), Positives = 69/156 (44%)
Query: 203 SADKKIKVWRRSPGNKKHSLVDVLER-HNSGINALALSCDGSVLYSGACDRSIIVWEKEE 261
S D +++W +S ++ + VLE H + + A S G +L + + D + +W+
Sbjct: 46 SGDNTVRIWEQSSLSRSWTCKTVLEETHTRTVRSCAWSPSGQLLATASFDGTTGIWKNYG 105
Query: 262 DDGNILVVGALRGHTKSILCMAVVSDLVCSG--SADKTIRIWRGIDRN-YTCLAVLEGHR 318
+ + L GH + ++ + C S DK++ IW ++ N Y C AVL GH
Sbjct: 106 SEFEC--ISTLEGHENEVKSVSWNASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHT 163
Query: 319 GPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVW 354
VK + T ++ S S D IKVW
Sbjct: 164 QDVKMV---------QWHPTMDVLFSCSYDNTIKVW 190
Score = 42 (19.8 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 17/59 (28%), Positives = 27/59 (45%)
Query: 1 QHNLSVVDHHCLTTLKGHNSYVSSLAL---------AGKFLYTGSSDNEVRSWDCNTFS 50
+ NL +V+ + L+GH V S+A L + S DN VR W+ ++ S
Sbjct: 5 EKNLELVE---IQKLEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLS 60
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 189 (71.6 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 70/305 (22%), Positives = 139/305 (45%)
Query: 14 TLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAV 71
TL GH VSS+ + G++L + S+D ++ W + + ++ +S + + + A
Sbjct: 14 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW--GAYDGKFEKT-ISGHKL-GISDVAW 69
Query: 72 KSLVVLADKLFSAHQDHKIRVWKINNQE-----PDHQKYTRLATLPTLGDRAIKLLMPKN 126
S ++ L SA D +++W +++ + H Y + + ++
Sbjct: 70 SSD---SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 126
Query: 127 HVQIRRHKT--C--TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITN 182
V+I KT C T H D VSA+ +D +L+ S S+D +IW T+ +CL+++ +
Sbjct: 127 -VRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 185
Query: 183 AHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCD 241
+ ++ V S +G + + D +K+W S G + + I A
Sbjct: 186 DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGH-KNEKYCIFANFSVTG 244
Query: 242 GSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAV--VSDLVCSGSA--DKT 297
G + SG+ D + +W + + +V L+GHT ++ A +++ S + DKT
Sbjct: 245 GKWIVSGSEDNLVYIWNLQTKE----IVQKLQGHTDVVISTACHPTENIIASAALENDKT 300
Query: 298 IRIWR 302
I++W+
Sbjct: 301 IKLWK 305
Score = 158 (60.7 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 48/217 (22%), Positives = 96/217 (44%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD-V 199
H +S +A + D LL S S D+T+KIW S KCL+++ H + + + + +
Sbjct: 60 HKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL-KGHSNYVFCCNFNPQSNLI 118
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEK 259
+GS D+ +++W G + L H+ ++A+ + DGS++ S + D +W+
Sbjct: 119 VSGSFDESVRIWDVKTGK----CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 174
Query: 260 EEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRG 319
++ S + + + + + D T+++W + CL GH+
Sbjct: 175 ASGQCLKTLIDD-DNPPVSFVKFSPNGKYILAATLDNTLKLW-DYSKG-KCLKTYTGHKN 231
Query: 320 PVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
C+ A + ++V SGS D + +W +
Sbjct: 232 EKYCIFANFS-----VTGGKWIV-SGSEDNLVYIWNL 262
Score = 136 (52.9 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 42/145 (28%), Positives = 67/145 (46%)
Query: 214 SPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALR 273
+P ++L L H ++++ S +G L S + D+ I +W DG +
Sbjct: 3 TPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY--DGKF--EKTIS 58
Query: 274 GHTKSILCMAVVSD--LVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDND 331
GH I +A SD L+ S S DKT++IW + CL L+GH V C
Sbjct: 59 GHKLGISDVAWSSDSNLLVSASDDKTLKIW-DVSSG-KCLKTLKGHSNYVFC-------- 108
Query: 332 RCDSSDTSYLVCSGSLDCDIKVWQI 356
C+ + S L+ SGS D +++W +
Sbjct: 109 -CNFNPQSNLIVSGSFDESVRIWDV 132
>TAIR|locus:2176897 [details] [associations]
symbol:AT5G52820 "AT5G52820" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AB009055 HSSP:P16649
InterPro:IPR011044 SUPFAM:SSF50969 PRINTS:PR00319 GO:GO:0080008
EMBL:AK227330 EMBL:BT004562 IPI:IPI00528132 RefSeq:NP_200094.1
UniGene:At.29592 ProteinModelPortal:Q9FLX9 SMR:Q9FLX9 STRING:Q9FLX9
PaxDb:Q9FLX9 PRIDE:Q9FLX9 EnsemblPlants:AT5G52820.1 GeneID:835359
KEGG:ath:AT5G52820 GeneFarm:3344 TAIR:At5g52820
HOGENOM:HOG000091641 InParanoid:Q9FLX9 KO:K14855 OMA:HFTCKGH
PhylomeDB:Q9FLX9 ProtClustDB:CLSN2686131 Genevestigator:Q9FLX9
InterPro:IPR012972 Pfam:PF08154 Uniprot:Q9FLX9
Length = 473
Score = 169 (64.5 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 63/218 (28%), Positives = 101/218 (46%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H AV+ + D ++Y+ S D TIK+W T+ K + + H IN++ALS + +
Sbjct: 240 HTLAVTCVKWGGDG-IIYTGSQDCTIKMWETTQGKLIREL-KGHGHWINSLALSTEYVLR 297
Query: 201 TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKE 260
TG+ D R+ P N++ LER+N L SG+ D ++ +WE
Sbjct: 298 TGAFDH---TGRQYPPNEEKQ--KALERYNK-----TKGDSPERLVSGSDDFTMFLWEPS 347
Query: 261 EDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIWRGIDRNYTCLAVLEGHR 318
L GH + + + D + S S DK++R+W GI + + V GH
Sbjct: 348 VSKQP---KKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQF--VTVFRGHV 402
Query: 319 GPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
GPV ++ + D S L+ SGS D +K+W+I
Sbjct: 403 GPVYQVSWSAD---------SRLLLSGSKDSTLKIWEI 431
Score = 132 (51.5 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 40/150 (26%), Positives = 65/150 (43%)
Query: 157 LYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSP 215
L S S D T+ +W S K + H +N V S DG + + S DK +++W
Sbjct: 332 LVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGIT 391
Query: 216 GNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGH 275
G V V H + ++ S D +L SG+ D ++ +WE + L GH
Sbjct: 392 GQ----FVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKK----LKQDLPGH 443
Query: 276 TKSILCMAVVSD--LVCSGSADKTIRIWRG 303
+ + D V SG D+ +++W+G
Sbjct: 444 ADEVFAVDWSPDGEKVVSGGKDRVLKLWKG 473
Score = 127 (49.8 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 58/210 (27%), Positives = 95/210 (45%)
Query: 15 LKGHNSYVSSLALAGKF-LYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAVKS 73
LKGH +++SLAL+ ++ L TG+ D+ R + N E Q+ L N KG
Sbjct: 278 LKGHGHWINSLALSTEYVLRTGAFDHTGRQYPPN----EEKQKALERYNKT---KGDSP- 329
Query: 74 LVVLADKLFSAHQDHKIRVWKIN-NQEPD-----HQKYTRLATLPTLGDRAIKLLMPKNH 127
++L S D + +W+ + +++P HQ+ G K+
Sbjct: 330 -----ERLVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKS- 383
Query: 128 VQIRRHKTCTWVH----HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA 183
V++ T +V HV V ++ + D LL S S D T+KIW K + +
Sbjct: 384 VRLWNGITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPG- 442
Query: 184 HDDAINAVALSDDGD-VYTGSADKKIKVWR 212
H D + AV S DG+ V +G D+ +K+W+
Sbjct: 443 HADEVFAVDWSPDGEKVVSGGKDRVLKLWK 472
Score = 120 (47.3 bits), Expect = 0.00026, P = 0.00026
Identities = 53/211 (25%), Positives = 90/211 (42%)
Query: 129 QIRRHKTC--TWVHHVDAVSALALTKDETLLYSVSWDRTIKIW----RTSDFKCLESITN 182
+IR C T H +AV ++ + D L S S D T+++W T F C
Sbjct: 94 RIRPVNRCSQTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTC-----K 148
Query: 183 AHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGIN--ALALS 239
H + + VA S DG + +GS +I W G + S + ++ +GI+ + LS
Sbjct: 149 GHKNWVLTVAWSPDGKHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLS 208
Query: 240 CDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD-LVCSGSADKTI 298
+ + D +W+ I L GHT ++ C+ D ++ +GS D TI
Sbjct: 209 SPCRRFVTSSKDGDARIWDITLKKSII----CLSGHTLAVTCVKWGGDGIIYTGSQDCTI 264
Query: 299 RIWRGIDRNYTCLAVLEGHRGPVKCLAAAID 329
++W + L+GH + LA + +
Sbjct: 265 KMWETTQGKL--IRELKGHGHWINSLALSTE 293
Score = 119 (46.9 bits), Expect = 0.00034, P = 0.00034
Identities = 72/306 (23%), Positives = 127/306 (41%)
Query: 12 LTTLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNN--IVAVG 67
L T KGH ++V ++A + GK L +GS E+ W N EL+ L+ + I +
Sbjct: 144 LFTCKGHKNWVLTVAWSPDGKHLVSGSKSGEICCW--NPKKGELEGSPLTGHKKWITGIS 201
Query: 68 KGAVKSLVVLADKLFSAHQDHKIRVWKINNQEPDH--QKYTRLATLPTLGDRAIKLLMPK 125
V L + ++ +D R+W I ++ +T T G I +
Sbjct: 202 WEPVH-LSSPCRRFVTSSKDGDARIWDITLKKSIICLSGHTLAVTCVKWGGDGI-IYTGS 259
Query: 126 NHVQIRRHKTCTWV------HHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFK--CL 177
I+ +T H +++LAL+ E +L + ++D T + + ++ K L
Sbjct: 260 QDCTIKMWETTQGKLIRELKGHGHWINSLALST-EYVLRTGAFDHTGRQYPPNEEKQKAL 318
Query: 178 ESITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALA 237
E D+ + +GS D + +W S + L H +N +
Sbjct: 319 ERYNKTKGDSPERLV--------SGSDDFTMFLWEPSVSKQPKKR---LTGHQQLVNHVY 367
Query: 238 LSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSAD 295
S DG + S + D+S+ +W G + V RGH + ++ +D L+ SGS D
Sbjct: 368 FSPDGKWIASASFDKSVRLWNGIT--GQFVTV--FRGHVGPVYQVSWSADSRLLLSGSKD 423
Query: 296 KTIRIW 301
T++IW
Sbjct: 424 STLKIW 429
Score = 68 (29.0 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 9 HHCLTTLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNT 48
+ C T+ GH V ++ + GK L +GS D VR WD T
Sbjct: 99 NRCSQTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYT 140
>TAIR|locus:2155904 [details] [associations]
symbol:AT5G49200 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR000571 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00642 PROSITE:PS50082
PROSITE:PS50103 PROSITE:PS50294 SMART:SM00320 SMART:SM00356
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AB016872 HOGENOM:HOG000239729
ProtClustDB:CLSN2686199 EMBL:AJ252066 IPI:IPI00517790
RefSeq:NP_199731.1 UniGene:At.64278 ProteinModelPortal:Q9FE91
SMR:Q9FE91 STRING:Q9FE91 PRIDE:Q9FE91 EnsemblPlants:AT5G49200.1
GeneID:834979 KEGG:ath:AT5G49200 GeneFarm:3799 TAIR:At5g49200
InParanoid:Q9FE91 PhylomeDB:Q9FE91 Genevestigator:Q9FE91
Uniprot:Q9FE91
Length = 419
Score = 193 (73.0 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 66/221 (29%), Positives = 106/221 (47%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H + +AL + L+SVS D T+++W + +C+ SI N DA +S+ V+
Sbjct: 130 HNKELKGIALPEGSDKLFSVSIDGTLRVWDCNSGQCVHSI-NL--DAEAGSLISEGPWVF 186
Query: 201 TGSADKKIKVWRRSPGNKKH-SLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEK 259
G + IK + H V+ + +NA+ ++ +G +L++G SI+VW+
Sbjct: 187 LGLPNA-IKAFNVQTSQDLHLQAAGVVGQ----VNAMTIA-NG-MLFAGTSSGSILVWKA 239
Query: 260 EEDDGN--ILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRN-YTCLAVLEG 316
D + + +L GH+ + C AV ++ SGS DKTI++W D N C+ L+
Sbjct: 240 TTDSESDPFKYLTSLEGHSGEVTCFAVGGQMLYSGSVDKTIKMW---DLNTLQCIMTLKQ 296
Query: 317 HRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQIS 357
H G V L D+C + S SLD IKVW S
Sbjct: 297 HTGTVTSLLCW---DKC--------LISSSLDGTIKVWAYS 326
Score = 125 (49.1 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 55/220 (25%), Positives = 96/220 (43%)
Query: 78 ADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLGDRAIKLLMPKNHVQIRRHKTCT 137
+DKLFS D +RVW N+ + H + + L N ++ +T
Sbjct: 143 SDKLFSVSIDGTLRVWDCNSGQCVHSINLDAEAGSLISEGPWVFLGLPNAIKAFNVQTSQ 202
Query: 138 WVHHVDAVSAL----ALTKDETLLYSVSWDRTIKIWR-TSD-----FKCLESITNAHDDA 187
+H + A + A+T +L++ + +I +W+ T+D FK L S+ H
Sbjct: 203 DLH-LQAAGVVGQVNAMTIANGMLFAGTSSGSILVWKATTDSESDPFKYLTSL-EGHSGE 260
Query: 188 INAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYS 247
+ A+ +Y+GS DK IK+W N ++ L++H + +L C L S
Sbjct: 261 VTCFAVGGQM-LYSGSVDKTIKMWDL---NTLQCIM-TLKQHTGTVTSLL--CWDKCLIS 313
Query: 248 GACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD 287
+ D +I VW E+ G + VV R S+ ++ + D
Sbjct: 314 SSLDGTIKVWAYSEN-GILKVVQTRRQEQSSVHALSGMHD 352
>DICTYBASE|DDB_G0284471 [details] [associations]
symbol:kif8 "kinesin-4" species:44689 "Dictyostelium
discoideum" [GO:0007018 "microtubule-based movement" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003777 "microtubule
motor activity" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001752 InterPro:IPR015943
InterPro:IPR019821 Pfam:PF00225 Pfam:PF00400 PRINTS:PR00380
PROSITE:PS00411 PROSITE:PS50067 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00129 SMART:SM00320 dictyBase:DDB_G0284471 GO:GO:0005524
GO:GO:0005737 GO:GO:0005875 GO:GO:0051301 GO:GO:0007067
GenomeReviews:CM000153_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005874 GO:GO:0003777
GO:GO:0007018 Gene3D:3.40.850.10 EMBL:AAFI02000066 HSSP:P33173
EMBL:AY484462 EMBL:U69985 RefSeq:XP_638546.1
ProteinModelPortal:Q6S003 EnsemblProtists:DDB0191403 GeneID:8624639
KEGG:ddi:DDB_G0284471 InParanoid:Q6S003 Uniprot:Q6S003
Length = 1873
Score = 153 (58.9 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 65/261 (24%), Positives = 117/261 (44%)
Query: 12 LTTLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAV 71
LTT H + S+++ K+L TGS D+ + N F + F+ + V
Sbjct: 1631 LTTTPHHTGTIFSMSVTSKYLVTGSRDHTI-----NLFHRD---SFVLAQKLQPPHHDGV 1682
Query: 72 KSLVVLADKLFSAHQDHKIRVWKI--------NNQEPDHQKY--TRLA--TLPTLGDRAI 119
S+ VL D ++S +D I+ W + NN E + T+LA T+P L +
Sbjct: 1683 TSIAVLDDVIYSGSRDRTIKRWDVSSINNLINNNGENNSNNLITTQLAQQTVPILSNTPS 1742
Query: 120 K--LLMPKNHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCL 177
L++ N+ I + + + S+ + +L S+ + T + + ++
Sbjct: 1743 NSNLIINNNNNIINNNNNNNNSSNNNKSSSAPSSTTSSLSSSLD-NSTFSL--LNQYQQN 1799
Query: 178 ESITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALA 237
+ NAH+D +N + + + G +++G D IK W P +SL L H S I+ L
Sbjct: 1800 RLLNNAHNDWVNCLCIHN-GMIFSGGKDSNIKGW--DPLLSSNSL---LLGHESSISCLT 1853
Query: 238 LSCDGSVLYSGACDRSIIVWE 258
S + L+SG+ D+ I +W+
Sbjct: 1854 SSKE--FLFSGSTDKCIKIWK 1872
Score = 150 (57.9 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 60/220 (27%), Positives = 97/220 (44%)
Query: 11 CLTTLKGHNSYVSSLALAGK---FLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVG 67
C T GH+ + +L L + LY+G SD ++ WD +T + LD LS+
Sbjct: 1500 CNWTFNGHDGGLLTLVLDEQNPSTLYSGGSDKNIKLWDLHTGDNMLD---LSS------- 1549
Query: 68 KGAVKSLVVLADK--LFSAHQDHKIRVWKINNQEPDHQKYTRLAT------LPTLGDRAI 119
G V+SL + +FS + ++VW I + P + T L T G+ +
Sbjct: 1550 PGPVRSLCINGSSGCMFSGGAERTVKVWDIRS--PGNTNLCIFKTPSDVNCLVTYGNYVV 1607
Query: 120 KLLMPKNH-VQIRRH-----KT--CTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRT 171
L V RH KT T HH + ++++T L + S D TI ++
Sbjct: 1608 SGLENGTFKVWDIRHMQKPLKTPLTTTPHHTGTIFSMSVTSK--YLVTGSRDHTINLFHR 1665
Query: 172 SDFKCLESITNAHDDAINAVALSDDGDVYTGSADKKIKVW 211
F + + H D + ++A+ DD +Y+GS D+ IK W
Sbjct: 1666 DSFVLAQKLQPPHHDGVTSIAVLDDV-IYSGSRDRTIKRW 1704
Score = 143 (55.4 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 71/281 (25%), Positives = 119/281 (42%)
Query: 96 NNQEPDHQKYTRLATLPTLGDRAIKL---LMPKNHVQ-IRRHKT--------CTWVHHVD 143
NN ++ +TRLA+ P R K L +++ I+R+ C W +
Sbjct: 1448 NNNSNNNDVFTRLASQPRPDSRLKKYRDKLNTDDYLMAIKRNMNREDENFMRCNWTFNGH 1507
Query: 144 AVSALALTKDE---TLLYSVSWDRTIKIWRTSDFKCLESITNAHDDA-INAVALS-DDGD 198
L L DE + LYS D+ IK+W D +++ + + ++ ++ G
Sbjct: 1508 DGGLLTLVLDEQNPSTLYSGGSDKNIKLW---DLHTGDNMLDLSSPGPVRSLCINGSSGC 1564
Query: 199 VYTGSADKKIKVWR-RSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVW 257
+++G A++ +KVW RSPGN + + S +N L G+ + SG + + VW
Sbjct: 1565 MFSGGAERTVKVWDIRSPGNTNLCIF----KTPSDVNCLVTY--GNYVVSGLENGTFKVW 1618
Query: 258 EKEEDDGNILV-VGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEG 316
+ + + HT +I M+V S + +GS D TI ++ D +
Sbjct: 1619 DIRHMQKPLKTPLTTTPHHTGTIFSMSVTSKYLVTGSRDHTINLFHR-DSFVLAQKLQPP 1677
Query: 317 HRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQIS 357
H V +A +D D Y SGS D IK W +S
Sbjct: 1678 HHDGVTSIAV-LD-------DVIY---SGSRDRTIKRWDVS 1707
Score = 103 (41.3 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 23/74 (31%), Positives = 38/74 (51%)
Query: 229 HNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDL 288
HN +N L + +++SG D +I W+ ++L+ GH SI C+ +
Sbjct: 1806 HNDWVNCLCIH--NGMIFSGGKDSNIKGWDPLLSSNSLLL-----GHESSISCLTSSKEF 1858
Query: 289 VCSGSADKTIRIWR 302
+ SGS DK I+IW+
Sbjct: 1859 LFSGSTDKCIKIWK 1872
Score = 73 (30.8 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 22/81 (27%), Positives = 37/81 (45%)
Query: 275 HTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCD 334
H + C+ + + ++ SG D I+ W D + ++L GH + CL
Sbjct: 1806 HNDWVNCLCIHNGMIFSGGKDSNIKGW---DPLLSSNSLLLGHESSISCL---------- 1852
Query: 335 SSDTSYLVCSGSLDCDIKVWQ 355
+S +L SGS D IK+W+
Sbjct: 1853 TSSKEFLF-SGSTDKCIKIWK 1872
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 189 (71.6 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 70/305 (22%), Positives = 139/305 (45%)
Query: 14 TLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAV 71
TL GH VSS+ + G++L + S+D ++ W + + ++ +S + + + A
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW--GAYDGKFEKT-ISGHKL-GISDVAW 95
Query: 72 KSLVVLADKLFSAHQDHKIRVWKINNQE-----PDHQKYTRLATLPTLGDRAIKLLMPKN 126
S ++ L SA D +++W +++ + H Y + + ++
Sbjct: 96 SSD---SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 152
Query: 127 HVQIRRHKT--C--TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITN 182
V+I KT C T H D VSA+ +D +L+ S S+D +IW T+ +CL+++ +
Sbjct: 153 -VRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 211
Query: 183 AHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCD 241
+ ++ V S +G + + D +K+W S G + + I A
Sbjct: 212 DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGH-KNEKYCIFANFSVTG 270
Query: 242 GSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAV--VSDLVCSGSA--DKT 297
G + SG+ D + +W + + +V L+GHT ++ A +++ S + DKT
Sbjct: 271 GKWIVSGSEDNLVYIWNLQTKE----IVQKLQGHTDVVISTACHPTENIIASAALENDKT 326
Query: 298 IRIWR 302
I++W+
Sbjct: 327 IKLWK 331
Score = 158 (60.7 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 48/217 (22%), Positives = 96/217 (44%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD-V 199
H +S +A + D LL S S D+T+KIW S KCL+++ H + + + + +
Sbjct: 86 HKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL-KGHSNYVFCCNFNPQSNLI 144
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEK 259
+GS D+ +++W G + L H+ ++A+ + DGS++ S + D +W+
Sbjct: 145 VSGSFDESVRIWDVKTGK----CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 200
Query: 260 EEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRG 319
++ S + + + + + D T+++W + CL GH+
Sbjct: 201 ASGQCLKTLIDD-DNPPVSFVKFSPNGKYILAATLDNTLKLW-DYSKG-KCLKTYTGHKN 257
Query: 320 PVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
C+ A + ++V SGS D + +W +
Sbjct: 258 EKYCIFANFS-----VTGGKWIV-SGSEDNLVYIWNL 288
Score = 136 (52.9 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 42/145 (28%), Positives = 67/145 (46%)
Query: 214 SPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALR 273
+P ++L L H ++++ S +G L S + D+ I +W DG +
Sbjct: 29 TPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY--DGKF--EKTIS 84
Query: 274 GHTKSILCMAVVSD--LVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDND 331
GH I +A SD L+ S S DKT++IW + CL L+GH V C
Sbjct: 85 GHKLGISDVAWSSDSNLLVSASDDKTLKIW-DVSSG-KCLKTLKGHSNYVFC-------- 134
Query: 332 RCDSSDTSYLVCSGSLDCDIKVWQI 356
C+ + S L+ SGS D +++W +
Sbjct: 135 -CNFNPQSNLIVSGSFDESVRIWDV 158
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 189 (71.6 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 70/305 (22%), Positives = 139/305 (45%)
Query: 14 TLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAV 71
TL GH VSS+ + G++L + S+D ++ W + + ++ +S + + + A
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW--GAYDGKFEKT-ISGHKL-GISDVAW 95
Query: 72 KSLVVLADKLFSAHQDHKIRVWKINNQE-----PDHQKYTRLATLPTLGDRAIKLLMPKN 126
S ++ L SA D +++W +++ + H Y + + ++
Sbjct: 96 SSD---SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 152
Query: 127 HVQIRRHKT--C--TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITN 182
V+I KT C T H D VSA+ +D +L+ S S+D +IW T+ +CL+++ +
Sbjct: 153 -VRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 211
Query: 183 AHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCD 241
+ ++ V S +G + + D +K+W S G + + I A
Sbjct: 212 DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGH-KNEKYCIFANFSVTG 270
Query: 242 GSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAV--VSDLVCSGSA--DKT 297
G + SG+ D + +W + + +V L+GHT ++ A +++ S + DKT
Sbjct: 271 GKWIVSGSEDNLVYIWNLQTKE----IVQKLQGHTDVVISTACHPTENIIASAALENDKT 326
Query: 298 IRIWR 302
I++W+
Sbjct: 327 IKLWK 331
Score = 158 (60.7 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 48/217 (22%), Positives = 96/217 (44%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD-V 199
H +S +A + D LL S S D+T+KIW S KCL+++ H + + + + +
Sbjct: 86 HKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL-KGHSNYVFCCNFNPQSNLI 144
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEK 259
+GS D+ +++W G + L H+ ++A+ + DGS++ S + D +W+
Sbjct: 145 VSGSFDESVRIWDVKTGK----CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 200
Query: 260 EEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRG 319
++ S + + + + + D T+++W + CL GH+
Sbjct: 201 ASGQCLKTLIDD-DNPPVSFVKFSPNGKYILAATLDNTLKLW-DYSKG-KCLKTYTGHKN 257
Query: 320 PVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
C+ A + ++V SGS D + +W +
Sbjct: 258 EKYCIFANFS-----VTGGKWIV-SGSEDNLVYIWNL 288
Score = 136 (52.9 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 42/145 (28%), Positives = 67/145 (46%)
Query: 214 SPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALR 273
+P ++L L H ++++ S +G L S + D+ I +W DG +
Sbjct: 29 TPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY--DGKF--EKTIS 84
Query: 274 GHTKSILCMAVVSD--LVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDND 331
GH I +A SD L+ S S DKT++IW + CL L+GH V C
Sbjct: 85 GHKLGISDVAWSSDSNLLVSASDDKTLKIW-DVSSG-KCLKTLKGHSNYVFC-------- 134
Query: 332 RCDSSDTSYLVCSGSLDCDIKVWQI 356
C+ + S L+ SGS D +++W +
Sbjct: 135 -CNFNPQSNLIVSGSFDESVRIWDV 158
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 189 (71.6 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 70/305 (22%), Positives = 139/305 (45%)
Query: 14 TLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAV 71
TL GH VSS+ + G++L + S+D ++ W + + ++ +S + + + A
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW--GAYDGKFEKT-ISGHKL-GISDVAW 95
Query: 72 KSLVVLADKLFSAHQDHKIRVWKINNQE-----PDHQKYTRLATLPTLGDRAIKLLMPKN 126
S ++ L SA D +++W +++ + H Y + + ++
Sbjct: 96 SSD---SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 152
Query: 127 HVQIRRHKT--C--TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITN 182
V+I KT C T H D VSA+ +D +L+ S S+D +IW T+ +CL+++ +
Sbjct: 153 -VRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 211
Query: 183 AHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCD 241
+ ++ V S +G + + D +K+W S G + + I A
Sbjct: 212 DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGH-KNEKYCIFANFSVTG 270
Query: 242 GSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAV--VSDLVCSGSA--DKT 297
G + SG+ D + +W + + +V L+GHT ++ A +++ S + DKT
Sbjct: 271 GKWIVSGSEDNLVYIWNLQTKE----IVQKLQGHTDVVISTACHPTENIIASAALENDKT 326
Query: 298 IRIWR 302
I++W+
Sbjct: 327 IKLWK 331
Score = 158 (60.7 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 48/217 (22%), Positives = 96/217 (44%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD-V 199
H +S +A + D LL S S D+T+KIW S KCL+++ H + + + + +
Sbjct: 86 HKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL-KGHSNYVFCCNFNPQSNLI 144
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEK 259
+GS D+ +++W G + L H+ ++A+ + DGS++ S + D +W+
Sbjct: 145 VSGSFDESVRIWDVKTGK----CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 200
Query: 260 EEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRG 319
++ S + + + + + D T+++W + CL GH+
Sbjct: 201 ASGQCLKTLIDD-DNPPVSFVKFSPNGKYILAATLDNTLKLW-DYSKG-KCLKTYTGHKN 257
Query: 320 PVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
C+ A + ++V SGS D + +W +
Sbjct: 258 EKYCIFANFS-----VTGGKWIV-SGSEDNLVYIWNL 288
Score = 136 (52.9 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 42/145 (28%), Positives = 67/145 (46%)
Query: 214 SPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALR 273
+P ++L L H ++++ S +G L S + D+ I +W DG +
Sbjct: 29 TPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY--DGKF--EKTIS 84
Query: 274 GHTKSILCMAVVSD--LVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDND 331
GH I +A SD L+ S S DKT++IW + CL L+GH V C
Sbjct: 85 GHKLGISDVAWSSDSNLLVSASDDKTLKIW-DVSSG-KCLKTLKGHSNYVFC-------- 134
Query: 332 RCDSSDTSYLVCSGSLDCDIKVWQI 356
C+ + S L+ SGS D +++W +
Sbjct: 135 -CNFNPQSNLIVSGSFDESVRIWDV 158
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 189 (71.6 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 70/305 (22%), Positives = 139/305 (45%)
Query: 14 TLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAV 71
TL GH VSS+ + G++L + S+D ++ W + + ++ +S + + + A
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW--GAYDGKFEKT-ISGHKL-GISDVAW 95
Query: 72 KSLVVLADKLFSAHQDHKIRVWKINNQE-----PDHQKYTRLATLPTLGDRAIKLLMPKN 126
S ++ L SA D +++W +++ + H Y + + ++
Sbjct: 96 SSD---SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 152
Query: 127 HVQIRRHKT--C--TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITN 182
V+I KT C T H D VSA+ +D +L+ S S+D +IW T+ +CL+++ +
Sbjct: 153 -VRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 211
Query: 183 AHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCD 241
+ ++ V S +G + + D +K+W S G + + I A
Sbjct: 212 DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGH-KNEKYCIFANFSVTG 270
Query: 242 GSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAV--VSDLVCSGSA--DKT 297
G + SG+ D + +W + + +V L+GHT ++ A +++ S + DKT
Sbjct: 271 GKWIVSGSEDNLVYIWNLQTKE----IVQKLQGHTDVVISTACHPTENIIASAALENDKT 326
Query: 298 IRIWR 302
I++W+
Sbjct: 327 IKLWK 331
Score = 158 (60.7 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 48/217 (22%), Positives = 96/217 (44%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD-V 199
H +S +A + D LL S S D+T+KIW S KCL+++ H + + + + +
Sbjct: 86 HKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL-KGHSNYVFCCNFNPQSNLI 144
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEK 259
+GS D+ +++W G + L H+ ++A+ + DGS++ S + D +W+
Sbjct: 145 VSGSFDESVRIWDVKTGK----CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 200
Query: 260 EEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRG 319
++ S + + + + + D T+++W + CL GH+
Sbjct: 201 ASGQCLKTLIDD-DNPPVSFVKFSPNGKYILAATLDNTLKLW-DYSKG-KCLKTYTGHKN 257
Query: 320 PVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
C+ A + ++V SGS D + +W +
Sbjct: 258 EKYCIFANFS-----VTGGKWIV-SGSEDNLVYIWNL 288
Score = 136 (52.9 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 42/145 (28%), Positives = 67/145 (46%)
Query: 214 SPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALR 273
+P ++L L H ++++ S +G L S + D+ I +W DG +
Sbjct: 29 TPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY--DGKF--EKTIS 84
Query: 274 GHTKSILCMAVVSD--LVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDND 331
GH I +A SD L+ S S DKT++IW + CL L+GH V C
Sbjct: 85 GHKLGISDVAWSSDSNLLVSASDDKTLKIW-DVSSG-KCLKTLKGHSNYVFC-------- 134
Query: 332 RCDSSDTSYLVCSGSLDCDIKVWQI 356
C+ + S L+ SGS D +++W +
Sbjct: 135 -CNFNPQSNLIVSGSFDESVRIWDV 158
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 189 (71.6 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 70/305 (22%), Positives = 139/305 (45%)
Query: 14 TLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAV 71
TL GH VSS+ + G++L + S+D ++ W + + ++ +S + + + A
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW--GAYDGKFEKT-ISGHKL-GISDVAW 95
Query: 72 KSLVVLADKLFSAHQDHKIRVWKINNQE-----PDHQKYTRLATLPTLGDRAIKLLMPKN 126
S ++ L SA D +++W +++ + H Y + + ++
Sbjct: 96 SSD---SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 152
Query: 127 HVQIRRHKT--C--TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITN 182
V+I KT C T H D VSA+ +D +L+ S S+D +IW T+ +CL+++ +
Sbjct: 153 -VRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 211
Query: 183 AHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCD 241
+ ++ V S +G + + D +K+W S G + + I A
Sbjct: 212 DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGH-KNEKYCIFANFSVTG 270
Query: 242 GSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAV--VSDLVCSGSA--DKT 297
G + SG+ D + +W + + +V L+GHT ++ A +++ S + DKT
Sbjct: 271 GKWIVSGSEDNLVYIWNLQTKE----IVQKLQGHTDVVISTACHPTENIIASAALENDKT 326
Query: 298 IRIWR 302
I++W+
Sbjct: 327 IKLWK 331
Score = 158 (60.7 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 48/217 (22%), Positives = 96/217 (44%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD-V 199
H +S +A + D LL S S D+T+KIW S KCL+++ H + + + + +
Sbjct: 86 HKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL-KGHSNYVFCCNFNPQSNLI 144
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEK 259
+GS D+ +++W G + L H+ ++A+ + DGS++ S + D +W+
Sbjct: 145 VSGSFDESVRIWDVKTGK----CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 200
Query: 260 EEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRG 319
++ S + + + + + D T+++W + CL GH+
Sbjct: 201 ASGQCLKTLIDD-DNPPVSFVKFSPNGKYILAATLDNTLKLW-DYSKG-KCLKTYTGHKN 257
Query: 320 PVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
C+ A + ++V SGS D + +W +
Sbjct: 258 EKYCIFANFS-----VTGGKWIV-SGSEDNLVYIWNL 288
Score = 136 (52.9 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 42/145 (28%), Positives = 67/145 (46%)
Query: 214 SPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALR 273
+P ++L L H ++++ S +G L S + D+ I +W DG +
Sbjct: 29 TPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY--DGKF--EKTIS 84
Query: 274 GHTKSILCMAVVSD--LVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDND 331
GH I +A SD L+ S S DKT++IW + CL L+GH V C
Sbjct: 85 GHKLGISDVAWSSDSNLLVSASDDKTLKIW-DVSSG-KCLKTLKGHSNYVFC-------- 134
Query: 332 RCDSSDTSYLVCSGSLDCDIKVWQI 356
C+ + S L+ SGS D +++W +
Sbjct: 135 -CNFNPQSNLIVSGSFDESVRIWDV 158
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 184 (69.8 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 46/145 (31%), Positives = 75/145 (51%)
Query: 163 DRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHS 221
DR ++W T ++ L I H +N + + V TGSAD+ +++W GN
Sbjct: 604 DRVARLWATDHYQPLR-IFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGN---- 658
Query: 222 LVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILC 281
V + H I++L S +G L +GA D +++W D G+ L+VG L+GHT ++
Sbjct: 659 CVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLW----DIGHGLMVGELKGHTDTVCS 714
Query: 282 MAVVSD--LVCSGSADKTIRIWRGI 304
+ D ++ SGS D T+R+W I
Sbjct: 715 LRFSRDGEILASGSMDNTVRLWDAI 739
Score = 123 (48.4 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 30/119 (25%), Positives = 59/119 (49%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD-V 199
H+ V+ + + + S DRT+++W + C+ T H I+++ S +G +
Sbjct: 624 HLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTG-HKGPIHSLTFSPNGRFL 682
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWE 258
TG+ D ++ +W G +V L+ H + +L S DG +L SG+ D ++ +W+
Sbjct: 683 ATGATDGRVLLWDIGHG----LMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 737
Score = 56 (24.8 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 12 LTTLKGHNS--YVSSLALAGKFLYTGSSDNEVRSWDCNTFS 50
L L GH+ Y +S + +L + S D VR W TF+
Sbjct: 534 LKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFT 574
Score = 39 (18.8 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 11/45 (24%), Positives = 21/45 (46%)
Query: 53 LDQEFLSNNNIVAVGKGAVKSLVVLADK--LFSAHQDHKIRVWKI 95
+D++ S I+ G V D+ L S+ +D +R+W +
Sbjct: 526 MDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSL 570
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 184 (69.8 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 46/145 (31%), Positives = 75/145 (51%)
Query: 163 DRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHS 221
DR ++W T ++ L I H +N + + V TGSAD+ +++W GN
Sbjct: 606 DRVARLWATDHYQPLR-IFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGN---- 660
Query: 222 LVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILC 281
V + H I++L S +G L +GA D +++W D G+ L+VG L+GHT ++
Sbjct: 661 CVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLW----DIGHGLMVGELKGHTDTVCS 716
Query: 282 MAVVSD--LVCSGSADKTIRIWRGI 304
+ D ++ SGS D T+R+W I
Sbjct: 717 LRFSRDGEILASGSMDNTVRLWDAI 741
Score = 123 (48.4 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 30/119 (25%), Positives = 59/119 (49%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD-V 199
H+ V+ + + + S DRT+++W + C+ T H I+++ S +G +
Sbjct: 626 HLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTG-HKGPIHSLTFSPNGRFL 684
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWE 258
TG+ D ++ +W G +V L+ H + +L S DG +L SG+ D ++ +W+
Sbjct: 685 ATGATDGRVLLWDIGHG----LMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 739
Score = 56 (24.8 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 12 LTTLKGHNS--YVSSLALAGKFLYTGSSDNEVRSWDCNTFS 50
L L GH+ Y +S + +L + S D VR W TF+
Sbjct: 536 LKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFT 576
Score = 39 (18.8 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 11/45 (24%), Positives = 21/45 (46%)
Query: 53 LDQEFLSNNNIVAVGKGAVKSLVVLADK--LFSAHQDHKIRVWKI 95
+D++ S I+ G V D+ L S+ +D +R+W +
Sbjct: 528 MDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSL 572
>SGD|S000001308 [details] [associations]
symbol:MET30 "F-box protein containing five copies of the
WD40 motif" species:4932 "Saccharomyces cerevisiae" [GO:0008652
"cellular amino acid biosynthetic process" evidence=IEA]
[GO:0019344 "cysteine biosynthetic process" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IGI;IPI] [GO:0000209 "protein polyubiquitination"
evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0009086
"methionine biosynthetic process" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0043224 "nuclear SCF ubiquitin ligase
complex" evidence=IDA] [GO:0046685 "response to arsenic-containing
substance" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IDA] [GO:0000114 "regulation of transcription involved in
G1 phase of mitotic cell cycle" evidence=IMP] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IMP] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IMP] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 SGD:S000001308 GO:GO:0005737
GO:GO:0046686 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046685 GO:GO:0000082 EMBL:BK006942
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
SUPFAM:SSF81383 EMBL:Z46861 GO:GO:0000114 GO:GO:0009086
GO:GO:0000209 GO:GO:0019344 GO:GO:0043130 GO:GO:0031146
GO:GO:0000087 GO:GO:0043224 GO:GO:0030174
GeneTree:ENSGT00690000101849 EMBL:L26505 PIR:S49932
RefSeq:NP_012218.1 ProteinModelPortal:P39014 SMR:P39014
DIP:DIP-1439N IntAct:P39014 MINT:MINT-385167 STRING:P39014
PaxDb:P39014 PeptideAtlas:P39014 EnsemblFungi:YIL046W GeneID:854765
KEGG:sce:YIL046W CYGD:YIL046w HOGENOM:HOG000166480 KO:K10259
OMA:ILCYLDT OrthoDB:EOG496313 NextBio:977517 Genevestigator:P39014
GermOnline:YIL046W Uniprot:P39014
Length = 640
Score = 194 (73.4 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 64/203 (31%), Positives = 96/203 (47%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H+D V L L + LL++ S+D TI IW K + ++ H D + + DD +
Sbjct: 301 HMDGV--LTLQFNYRLLFTGSYDSTIGIWDLFTGKLIRRLSG-HSDGVKTLYF-DDRKLI 356
Query: 201 TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKE 260
TGS DK I+VW G + H+ + L++ V+ SG+ D+++ VW E
Sbjct: 357 TGSLDKTIRVWNYITGE----CISTYRGHSDSV--LSVDSYQKVIVSGSADKTVKVWHVE 410
Query: 261 EDDGNILVVGALRGHTKSILCMAV-VSDLVC-SGSADKTIRIWRGIDRNYTCLAVLEGHR 318
LRGHT+ + C+ + C S S D TIR+W I N +CL V GH
Sbjct: 411 SR-----TCYTLRGHTEWVNCVKLHPKSFSCFSCSDDTTIRMW-DIRTN-SCLKVFRGHV 463
Query: 319 GPV-KCLAAAI-DNDRCDSSDTS 339
G V K + I D + + +TS
Sbjct: 464 GQVQKIIPLTIKDVENLATDNTS 486
Score = 155 (59.6 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 48/158 (30%), Positives = 72/158 (45%)
Query: 199 VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWE 258
++TGS D I +W G L+ L H+ G+ L D L +G+ D++I VW
Sbjct: 315 LFTGSYDSTIGIWDLFTGK----LIRRLSGHSDGVKTLYF--DDRKLITGSLDKTIRVWN 368
Query: 259 KEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHR 318
+ + RGH+ S+L + ++ SGSADKT+++W R TC L GH
Sbjct: 369 YITGE----CISTYRGHSDSVLSVDSYQKVIVSGSADKTVKVWHVESR--TCYT-LRGHT 421
Query: 319 GPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
V C+ + C S CS D I++W I
Sbjct: 422 EWVNCVKLHPKSFSCFS-------CSD--DTTIRMWDI 450
Score = 129 (50.5 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 78/329 (23%), Positives = 134/329 (40%)
Query: 10 HC-LTTLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGK 68
HC + KGH V +L + L+TGS D+ + WD F+ +L + LS ++
Sbjct: 292 HCRIQEFKGHMDGVLTLQFNYRLLFTGSYDSTIGIWDL--FTGKLIRR-LSGHS------ 342
Query: 69 GAVKSLVVLADKLFSAHQDHKIRVWKINNQE-----PDHQ-------KYTRLATLPTLGD 116
VK+L KL + D IRVW E H Y ++ + D
Sbjct: 343 DGVKTLYFDDRKLITGSLDKTIRVWNYITGECISTYRGHSDSVLSVDSYQKVIVSGS-AD 401
Query: 117 RAIKLLMPKNHVQIRRHKTC-TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFK 175
+ +K+ HV+ R TC T H + V+ + L +S S D TI++W
Sbjct: 402 KTVKVW----HVESR---TCYTLRGHTEWVNCVKLHPKSFSCFSCSDDTTIRMWDIRTNS 454
Query: 176 CLESITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINA 235
CL+ + H + + DV + D SP + ++ D + ++ N
Sbjct: 455 CLK-VFRGHVGQVQKIIPLTIKDVENLATDNTSD--GSSPQDDP-TMTDGADESDTPSNE 510
Query: 236 LALSCDGSVLYSG---AC--DRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVC 290
D ++ Y +C D +I +W+ + G + GH + + +A + +
Sbjct: 511 QETVLDENIPYPTHLLSCGLDNTIKLWDVKT--GKC--IRTQFGHVEGVWDIAADNFRII 566
Query: 291 SGSADKTIRIWRGID-RNYTCLAVLEGHR 318
SGS D +I++W D ++ C+ G R
Sbjct: 567 SGSHDGSIKVW---DLQSGKCMHTFNGRR 592
>WB|WBGene00001679 [details] [associations]
symbol:gpb-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0035046 "pronuclear migration"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0040013 "negative
regulation of locomotion" evidence=IMP] [GO:0046662 "regulation of
oviposition" evidence=IMP] [GO:0005834 "heterotrimeric G-protein
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0009792 GO:GO:0000132
GO:GO:0035046 GO:GO:0018991 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0040013 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0004871
GO:GO:0046662 PRINTS:PR00319 GO:GO:0005834
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356 OMA:CMLWDIE
InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:X17497 EMBL:AF291846
EMBL:Z49127 PIR:S09591 PIR:T20830 RefSeq:NP_001254312.1
UniGene:Cel.6600 ProteinModelPortal:P17343 SMR:P17343 STRING:P17343
PaxDb:P17343 PRIDE:P17343 EnsemblMetazoa:F13D12.7a.1
EnsemblMetazoa:F13D12.7a.2 EnsemblMetazoa:F13D12.7a.3 GeneID:174803
KEGG:cel:CELE_F13D12.7 UCSC:F13D12.7.1 CTD:174803
WormBase:F13D12.7a InParanoid:P17343 KO:K07972 NextBio:885576
ArrayExpress:P17343 Uniprot:P17343
Length = 340
Score = 188 (71.2 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 78/303 (25%), Positives = 132/303 (43%)
Query: 14 TLKGHNS--YVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAV 71
TL+GH + Y A + L + S D ++ WD T ++++ L ++ ++
Sbjct: 50 TLRGHLAKIYAMHWASDSRNLVSASQDGKLIVWDSYT-TNKVHAIPLRSSWVMTCAYAPS 108
Query: 72 KSLVVLA--DKLFSAHQDHKIRVW--KINNQEPDHQKYTRLATLPTLGDRAIKLL---MP 124
S V D + S + K R +++ + P H Y L+ L D I M
Sbjct: 109 GSFVACGGLDNICSIYS-LKTREGNVRVSRELPGHTGY--LSCCRFLDDNQIVTSSGDMT 165
Query: 125 KNHVQIRRHKTCT-WVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA 183
I + CT + H V +L+L+ D S + D + K+W D C ++
Sbjct: 166 CALWDIETGQQCTAFTGHTGDVMSLSLSPDFRTFISGACDASAKLWDIRDGMCKQTFPG- 224
Query: 184 HDDAINAVALSDDGDVY-TGSADKKIKVW--RRSPGNKKHSLVDVLERHNSGINALALSC 240
H+ INAVA G+ + TGS D +++ R +S +++ GI ++A S
Sbjct: 225 HESDINAVAFFPSGNAFATGSDDATCRLFDIRADQELAMYSHDNII----CGITSVAFSK 280
Query: 241 DGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTI 298
G +L++G D + VW+ + G L GH + C+ V D VC+GS D +
Sbjct: 281 SGRLLFAGYDDFNCNVWDSMRQER----AGVLAGHDNRVSCLGVTEDGMAVCTGSWDSFL 336
Query: 299 RIW 301
+IW
Sbjct: 337 KIW 339
Score = 139 (54.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 45/164 (27%), Positives = 70/164 (42%)
Query: 194 SDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRS 253
SD ++ + S D K+ VW NK H++ +S + A + GS + G D
Sbjct: 65 SDSRNLVSASQDGKLIVWDSYTTNKVHAI----PLRSSWVMTCAYAPSGSFVACGGLDNI 120
Query: 254 IIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD-LVCSGSADKTIRIWRGIDRNYTCLA 312
++ + +GN+ V L GHT + C + D + + S D T +W I+ C A
Sbjct: 121 CSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSGDMTCALW-DIETGQQCTA 179
Query: 313 VLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
GH G V L+ S D + SG+ D K+W I
Sbjct: 180 -FTGHTGDVMSLSL--------SPDFRTFI-SGACDASAKLWDI 213
Score = 115 (45.5 bits), Expect = 0.00055, P = 0.00055
Identities = 50/217 (23%), Positives = 85/217 (39%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H +S D ++ S S D T +W + + T H + +++LS D +
Sbjct: 142 HTGYLSCCRFLDDNQIVTS-SGDMTCALWDIETGQQCTAFTG-HTGDVMSLSLSPDFRTF 199
Query: 201 -TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEK 259
+G+ D K+W G K + H S INA+A G+ +G+ D + +++
Sbjct: 200 ISGACDASAKLWDIRDGMCKQTFPG----HESDINAVAFFPSGNAFATGSDDATCRLFDI 255
Query: 260 EEDDGNILVV--GALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGH 317
D + + G T + + L+ +G D +W + + VL GH
Sbjct: 256 RADQELAMYSHDNIICGITS--VAFSKSGRLLFAGYDDFNCNVWDSMRQERA--GVLAGH 311
Query: 318 RGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVW 354
V CL D VC+GS D +K+W
Sbjct: 312 DNRVSCLGVTEDG---------MAVCTGSWDSFLKIW 339
>UNIPROTKB|A7RWD2 [details] [associations]
symbol:v1g226592 "Probable cytosolic iron-sulfur protein
assembly protein" species:45351 "Nematostella vectensis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:DS469546
RefSeq:XP_001636358.1 UniGene:Nve.10750 ProteinModelPortal:A7RWD2
STRING:A7RWD2 EnsemblMetazoa:NEMVEDRAFT_v1g226592-RA GeneID:5516269
KEGG:nve:NEMVE_v1g226592 Uniprot:A7RWD2
Length = 327
Score = 187 (70.9 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 57/224 (25%), Positives = 106/224 (47%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFK--CLESITNAHDDAINAVALSDDGD 198
H D V ++A + + +L S D+TI+IW K C + + H I ++ S G
Sbjct: 4 HEDRVWSVAWSPNGFVLASCGGDKTIRIWGKEGDKWICKTILEDGHQRTIRSLGWSPCGT 63
Query: 199 -VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVW 257
+ + S D +W + G + + LE H + + ++ S GS+L + D+S+ +W
Sbjct: 64 FLASASFDATTCIWDQKSGEFECNAT--LEGHENEVKSVDWSVSGSLLATCGRDKSVWIW 121
Query: 258 EKEEDDGNILVVGALRGHTKSI--LCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLE 315
E +EDD + HT+ + + +++ S S D TI++++ + +++C LE
Sbjct: 122 EVQEDD-EYECASVIHSHTQDVKKVVWHPTKEILASCSYDDTIKLYKEDEDDWSCCDTLE 180
Query: 316 GHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQISFP 359
GH V ++ DR S CS D +++W+ S+P
Sbjct: 181 GHESTVWSISFDGSGDRIVS-------CSD--DKTVRIWK-SYP 214
Score = 159 (61.0 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 60/251 (23%), Positives = 112/251 (44%)
Query: 115 GDRAIKLLMPKNHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIW--RTS 172
GD+ I++ + I KT H + +L + T L S S+D T IW ++
Sbjct: 25 GDKTIRIWGKEGDKWIC--KTILEDGHQRTIRSLGWSPCGTFLASASFDATTCIWDQKSG 82
Query: 173 DFKCLESITNAHDDAINAVALSDDGDVY-TGSADKKIKVWRRSPGNKKHSLVDVLERHNS 231
+F+C ++ H++ + +V S G + T DK + +W ++ + V+ H
Sbjct: 83 EFECNATL-EGHENEVKSVDWSVSGSLLATCGRDKSVWIWEVQEDDE-YECASVIHSHTQ 140
Query: 232 GINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAV--VSDLV 289
+ + +L S + D +I +++++EDD + L GH ++ ++ D +
Sbjct: 141 DVKKVVWHPTKEILASCSYDDTIKLYKEDEDDWSCC--DTLEGHESTVWSISFDGSGDRI 198
Query: 290 CSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAID-NDRC--DS--SDTSYLVCS 344
S S DKT+RIW+ V+ G KC+ +DR D S S L+ +
Sbjct: 199 VSCSDDKTVRIWKSYPPGNQEGVVVSGKHTKWKCVCVLSGYHDRTIYDVHWSKVSGLIAT 258
Query: 345 GSLDCDIKVWQ 355
S D I++++
Sbjct: 259 ASGDDCIRIFK 269
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 183 (69.5 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 45/145 (31%), Positives = 75/145 (51%)
Query: 163 DRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHS 221
DR ++W T ++ L I H +N + + V TGSAD+ +++W GN
Sbjct: 606 DRVARLWATDHYQPLR-IFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGN---- 660
Query: 222 LVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILC 281
V + H I++L S +G L +GA D +++W D G+ L+VG L+GHT ++
Sbjct: 661 CVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLW----DIGHGLMVGELKGHTDTVCS 716
Query: 282 MAVVSD--LVCSGSADKTIRIWRGI 304
+ D ++ SGS D T+R+W +
Sbjct: 717 LRFSRDGEILASGSMDNTVRLWDAV 741
Score = 123 (48.4 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 30/119 (25%), Positives = 59/119 (49%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD-V 199
H+ V+ + + + S DRT+++W + C+ T H I+++ S +G +
Sbjct: 626 HLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTG-HKGPIHSLTFSPNGRFL 684
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWE 258
TG+ D ++ +W G +V L+ H + +L S DG +L SG+ D ++ +W+
Sbjct: 685 ATGATDGRVLLWDIGHG----LMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 739
Score = 56 (24.8 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 12 LTTLKGHNS--YVSSLALAGKFLYTGSSDNEVRSWDCNTFS 50
L L GH+ Y +S + +L + S D VR W TF+
Sbjct: 536 LKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFT 576
Score = 39 (18.8 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 11/45 (24%), Positives = 21/45 (46%)
Query: 53 LDQEFLSNNNIVAVGKGAVKSLVVLADK--LFSAHQDHKIRVWKI 95
+D++ S I+ G V D+ L S+ +D +R+W +
Sbjct: 528 MDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSL 572
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 183 (69.5 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 45/145 (31%), Positives = 75/145 (51%)
Query: 163 DRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHS 221
DR ++W T ++ L I H +N + + V TGSAD+ +++W GN
Sbjct: 607 DRVARLWATDHYQPLR-IFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGN---- 661
Query: 222 LVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILC 281
V + H I++L S +G L +GA D +++W D G+ L+VG L+GHT ++
Sbjct: 662 CVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLW----DIGHGLMVGELKGHTDTVCS 717
Query: 282 MAVVSD--LVCSGSADKTIRIWRGI 304
+ D ++ SGS D T+R+W +
Sbjct: 718 LRFSRDGEILASGSMDNTVRLWDAV 742
Score = 123 (48.4 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 30/119 (25%), Positives = 59/119 (49%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD-V 199
H+ V+ + + + S DRT+++W + C+ T H I+++ S +G +
Sbjct: 627 HLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTG-HKGPIHSLTFSPNGRFL 685
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWE 258
TG+ D ++ +W G +V L+ H + +L S DG +L SG+ D ++ +W+
Sbjct: 686 ATGATDGRVLLWDIGHG----LMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 740
Score = 56 (24.8 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 12 LTTLKGHNS--YVSSLALAGKFLYTGSSDNEVRSWDCNTFS 50
L L GH+ Y +S + +L + S D VR W TF+
Sbjct: 537 LKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFT 577
Score = 39 (18.8 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 11/45 (24%), Positives = 21/45 (46%)
Query: 53 LDQEFLSNNNIVAVGKGAVKSLVVLADK--LFSAHQDHKIRVWKI 95
+D++ S I+ G V D+ L S+ +D +R+W +
Sbjct: 529 MDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSL 573
>UNIPROTKB|Q12788 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9606
"Homo sapiens" [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0032040 "small-subunit processome" evidence=IEA] [GO:0005057
"receptor signaling protein activity" evidence=TAS] [GO:0007199
"G-protein coupled receptor signaling pathway coupled to cGMP
nucleotide second messenger" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471112 GO:GO:0005057
GO:GO:0007199 EMBL:AC005606 GO:GO:0006364 GO:GO:0032040
EMBL:AC005363 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
KO:K14555 OrthoDB:EOG42JNQR EMBL:U02609 EMBL:AB209173 EMBL:BC010231
EMBL:BC014007 EMBL:BC035409 IPI:IPI00477971 PIR:A49367
RefSeq:NP_006444.2 UniGene:Hs.513267 ProteinModelPortal:Q12788
SMR:Q12788 IntAct:Q12788 MINT:MINT-1427903 STRING:Q12788
PhosphoSite:Q12788 DMDM:223634675 SWISS-2DPAGE:Q12788 PaxDb:Q12788
PRIDE:Q12788 Ensembl:ENST00000568546 GeneID:10607 KEGG:hsa:10607
UCSC:uc002cnu.1 GeneCards:GC16P002022 HGNC:HGNC:11587 HPA:HPA042562
MIM:605915 neXtProt:NX_Q12788 PharmGKB:PA36351 OMA:HHFRGSP
PhylomeDB:Q12788 GenomeRNAi:10607 NextBio:40288 ArrayExpress:Q12788
Bgee:Q12788 CleanEx:HS_TBL3 Genevestigator:Q12788
GermOnline:ENSG00000183751 Uniprot:Q12788
Length = 808
Score = 174 (66.3 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 63/240 (26%), Positives = 113/240 (47%)
Query: 136 CTWVH-HVDAVSALALTKDETLLYSVSWDRTIKIWRTS---DFKCLESITNAHDDAINAV 191
C +H H D V AL + + L S + D++++IWR + C+ + H ++ V
Sbjct: 369 CQILHGHTDIVLALDVFRKGWLFASCAKDQSVRIWRMNKAGQVMCVAQ-GSGHTHSVGTV 427
Query: 192 ALS--DDGDVYTGSADKKIKVW---------RRSPGNKKHSL-VDVLER-HNSGINALAL 238
S + + TGS D +K+W +P N L +R H+ IN++A+
Sbjct: 428 CCSRLKESFLVTGSQDCTVKLWPLPKALLSKNTAPDNGPILLQAQTTQRCHDKDINSVAI 487
Query: 239 SCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCM--AVVSDLVCSGSADK 296
+ + +L +G+ DR+ +W + ++G GH + + C+ + + ++ + SAD
Sbjct: 488 APNDKLLATGSQDRTAKLWALPQCQ----LLGVFSGHRRGLWCVQFSPMDQVLATASADG 543
Query: 297 TIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
TI++W D ++CL EGH V +A S + L+ SGS D +K+W I
Sbjct: 544 TIKLWALQD--FSCLKTFEGHDASVLKVAFV--------SRGTQLLSSGS-DGLVKLWTI 592
Score = 125 (49.1 bits), Expect = 8.9e-07, Sum P(2) = 8.9e-07
Identities = 43/184 (23%), Positives = 83/184 (45%)
Query: 124 PKNHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA 183
P N + + +T H D ++++A+ ++ LL + S DRT K+W + L + +
Sbjct: 462 PDNGPILLQAQTTQRCHDKD-INSVAIAPNDKLLATGSQDRTAKLWALPQCQLL-GVFSG 519
Query: 184 HDDAINAVALSD-DGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDG 242
H + V S D + T SAD IK+W + S + E H++ + +A G
Sbjct: 520 HRRGLWCVQFSPMDQVLATASADGTIKLWAL----QDFSCLKTFEGHDASVLKVAFVSRG 575
Query: 243 SVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSI--LCMAVVSDLVCSGSADKTIRI 300
+ L S D + +W + ++ V L H + L + + D +G++D + +
Sbjct: 576 TQLLSSGSDGLVKLWTIKNNE----CVRTLDAHEDKVWGLHCSRLDDHALTGASDSRVIL 631
Query: 301 WRGI 304
W+ +
Sbjct: 632 WKDV 635
Score = 124 (48.7 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 48/195 (24%), Positives = 85/195 (43%)
Query: 154 ETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDG-DVYTGSADKKIKVWR 212
+ +L + S D TIK+W DF CL++ HD ++ VA G + + +D +K+W
Sbjct: 533 DQVLATASADGTIKLWALQDFSCLKTF-EGHDASVLKVAFVSRGTQLLSSGSDGLVKLWT 591
Query: 213 RSPGNKKHSLVDVLERHNSGINALALS-CDGSVLYSGACDRSIIVWEKEEDDGNILVVGA 271
K + V L+ H + L S D L +GA D +I+W K+ + A
Sbjct: 592 I----KNNECVRTLDAHEDKVWGLHCSRLDDHAL-TGASDSRVILW-KDVTEAEQAEEQA 645
Query: 272 LRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEG-HRGPVKC--LAAAI 328
+ + ++ + +L+ + + + +DR +T L V++ R P C L A +
Sbjct: 646 RQ--EEQVVRQQELDNLLHEKRYLRALGLAISLDRPHTVLTVIQAIRRDPEACEKLEATM 703
Query: 329 DNDRCDSSDTSYLVC 343
R D + C
Sbjct: 704 LRLRRDQKEALLRFC 718
Score = 104 (41.7 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 44/175 (25%), Positives = 73/175 (41%)
Query: 198 DV-YTGSADKKIKVWRRSPGNK----KHSLVDVLERHNSGINALALSCDGSVLYSGACDR 252
DV + G D + V SP K + S +L H + AL + G + S A D+
Sbjct: 339 DVRFLGPEDSHVVVASNSPCLKVFELQTSACQILHGHTDIVLALDVFRKGWLFASCAKDQ 398
Query: 253 SIIVWEKEEDDGNILVVGALRGHTKSI---LCMAVVSDLVCSGSADKTIRIWRGIDRNYT 309
S+ +W + G ++ V GHT S+ C + + +GS D T+++W + +
Sbjct: 399 SVRIWRMNKA-GQVMCVAQGSGHTHSVGTVCCSRLKESFLVTGSQDCTVKLWP-LPKALL 456
Query: 310 CLAVLEGHRGPVKCLAAAIDNDRCDSSDTSY--------LVCSGSLDCDIKVWQI 356
+ GP+ L A RC D + L+ +GS D K+W +
Sbjct: 457 SKNTAPDN-GPI--LLQAQTTQRCHDKDINSVAIAPNDKLLATGSQDRTAKLWAL 508
Score = 66 (28.3 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 26/95 (27%), Positives = 41/95 (43%)
Query: 5 SVVDHHCLTTLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTF-SSELDQEFLSNN 61
S+ D CL L H S V+SLA + G + + D WD + ++ F S
Sbjct: 181 SLQDRSCLAVLTAHYSAVTSLAFSADGHTMLSSGRDKICIIWDLQSCQATRTVPVFESVE 240
Query: 62 NIVAVGKGAVKSLVVLADKLF--SAHQDHKIRVWK 94
V + + V L V + L+ +A +RVW+
Sbjct: 241 AAVLLPEEPVSQLGVKSPGLYFLTAGDQGTLRVWE 275
Score = 54 (24.1 bits), Expect = 4.9e-11, Sum P(2) = 4.9e-11
Identities = 22/83 (26%), Positives = 34/83 (40%)
Query: 18 HNSYVSSLAL--AGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAVKSLV 75
H + V+++A L TG D VR WD F + +V +
Sbjct: 108 HTAPVATMAFDPTSTLLATGGCDGAVRVWDIVRHYGT--HHFRGSPGVVHLVAFHPDPTR 165
Query: 76 VLADKLFSAHQDHKIRVWKINNQ 98
+L LFS+ D IRVW + ++
Sbjct: 166 LL---LFSSATDAAIRVWSLQDR 185
Score = 51 (23.0 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 11 CLTTLKGHNSYVSSLA---LAGKFLYTGSSDNEVRSW 44
C+ GH V ++ L FL TGS D V+ W
Sbjct: 413 CVAQGSGHTHSVGTVCCSRLKESFLVTGSQDCTVKLW 449
Score = 41 (19.5 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 81 LF-SAHQDHKIRVWKIN 96
LF S +D +R+W++N
Sbjct: 390 LFASCAKDQSVRIWRMN 406
>ZFIN|ZDB-GENE-090313-79 [details] [associations]
symbol:fbxw7 "F-box and WD repeat domain containing
7" species:7955 "Danio rerio" [GO:0045746 "negative regulation of
Notch signaling pathway" evidence=IMP] [GO:0001525 "angiogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-090313-79 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001525 SUPFAM:SSF81383 GO:GO:0045746
GeneTree:ENSGT00690000101849 EMBL:AL953881 IPI:IPI00499035
Ensembl:ENSDART00000086512 Bgee:F1RCB5 Uniprot:F1RCB5
Length = 760
Score = 194 (73.4 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 59/187 (31%), Positives = 87/187 (46%)
Query: 169 WRTSDFKCLESITNAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLE 227
WR D K + HDD + L G+ + +GS D +KVW G +LV
Sbjct: 418 WRRGDLKS-PKVLKGHDDHV-ITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVG--- 472
Query: 228 RHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD 287
H G+ + + +++ SG+ DR++ VW E + + L GHT ++ CM +
Sbjct: 473 -HTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGE----CIHTLYGHTSTVRCMHLHEK 525
Query: 288 LVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSL 347
V SGS D T+R+W I+ CL VL GH V+C+ D R V SG+
Sbjct: 526 RVVSGSRDATLRVW-DIETGQ-CLHVLMGHVAAVRCVQ--YDGRR---------VVSGAY 572
Query: 348 DCDIKVW 354
D +KVW
Sbjct: 573 DFMVKVW 579
Score = 184 (69.8 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 69/295 (23%), Positives = 127/295 (43%)
Query: 15 LKGHNSYV-SSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAVKS 73
LKGH+ +V + L G + +GS DN ++ W T + + + + G V S
Sbjct: 429 LKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVT--GKCLRTLVGHT-------GGVWS 479
Query: 74 LVVLADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLGDRAIKLLMPKNHVQIRRH 133
+ + + S D ++VW E H Y +T+ + +++ +R
Sbjct: 480 SQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVW 539
Query: 134 --KTCTWVH----HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDA 187
+T +H HV AV + D + S ++D +K+W CL ++ H +
Sbjct: 540 DIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTL-QGHTNR 596
Query: 188 INAVALSDDG-DVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLY 246
+ +L DG V +GS D I+VW GN H+L H S + + L ++L
Sbjct: 597 V--YSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTG----HQSLTSGMELK--DNILV 648
Query: 247 SGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIW 301
SG D ++ +W+ + + G + H ++ C+ + V + S D T+++W
Sbjct: 649 SGNADSTVKIWDIKTGQCLQTLQGPHK-HQSAVTCLQFNKNFVITSSDDGTVKLW 702
Score = 175 (66.7 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 57/187 (30%), Positives = 89/187 (47%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H V + L E + S S D T+++W +CL + H A+ V D V
Sbjct: 513 HTSTVRCMHL--HEKRVVSGSRDATLRVWDIETGQCLH-VLMGHVAAVRCVQY-DGRRVV 568
Query: 201 TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKE 260
+G+ D +KVW P + + + L+ H + + +L DG + SG+ D SI VW+ E
Sbjct: 569 SGAYDFMVKVW--DP--ETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVE 622
Query: 261 EDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEG---H 317
GN + L GH M + +++ SG+AD T++IW I + CL L+G H
Sbjct: 623 T--GNC--IHTLTGHQSLTSGMELKDNILVSGNADSTVKIW-DI-KTGQCLQTLQGPHKH 676
Query: 318 RGPVKCL 324
+ V CL
Sbjct: 677 QSAVTCL 683
Score = 145 (56.1 bits), Expect = 8.9e-07, P = 8.9e-07
Identities = 68/296 (22%), Positives = 121/296 (40%)
Query: 5 SVVDHHCLTTLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIV 64
S V CL TL GH V S + + +GS+D ++ W+ T E + +
Sbjct: 460 SAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAET--GECIHTLYGHTS-- 515
Query: 65 AVGKGAVKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTL---GDRAIKL 121
V+ + + ++ S +D +RVW I + H +A + + G R +
Sbjct: 516 -----TVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSG 570
Query: 122 LMPKNHVQIRRHKTCTWVH----HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCL 177
V++ +T T +H H + V +L D + S S D +I++W C+
Sbjct: 571 AYDFM-VKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCI 627
Query: 178 ESITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALA 237
++T H + + L D+ + +G+AD +K+W G +L +H S + L
Sbjct: 628 HTLTG-HQSLTSGMELKDN-ILVSGNADSTVKIWDIKTGQCLQTLQGP-HKHQSAVTCLQ 684
Query: 238 L--------SCDGSV----LYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILC 281
S DG+V L +G R+++ E G VV +R ++C
Sbjct: 685 FNKNFVITSSDDGTVKLWDLRTGEFIRNLVTLESGGSGG---VVWRIRASNTKLVC 737
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 192 (72.6 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 56/198 (28%), Positives = 92/198 (46%)
Query: 140 HHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAH---DDAINAVALSDD 196
H +D S L + D + S S D+ KIW KC ++ N + + +VA+S D
Sbjct: 368 HELDIYS-LDYSSDGRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPD 426
Query: 197 GD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSII 255
G V GS D +++W G ++ E H + ++A S DG L SG+ D+S+
Sbjct: 427 GRLVAAGSLDNIVRLWDAQTGY----FLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLK 482
Query: 256 VWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIWRGIDRNYTCLAV 313
+W+ GH +L +A D + SGS D++++ W RN T +
Sbjct: 483 LWDLSGSRSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWD--PRNGTTHMM 540
Query: 314 LEGHRGPVKCLAAAIDND 331
L+GH+ V +A + N+
Sbjct: 541 LQGHKNSVISVALSPKNN 558
Score = 182 (69.1 bits), Expect = 4.4e-11, P = 4.4e-11
Identities = 74/308 (24%), Positives = 140/308 (45%)
Query: 18 HNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAVKSLV 75
HNS V + + GK+L TG + + +D +T + F+ + G ++S+
Sbjct: 280 HNSVVCCVNFSNDGKYLATGCN-RSAQIYDVDT--GKKVHAFVDESE--KDGDLYIRSVC 334
Query: 76 VLADK--LFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLGDRAI-KLLMP-----KNH 127
D L + +D ++VW I+ ++ H Y + +L + + ++ K
Sbjct: 335 FSPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAK 394
Query: 128 V-QIRRHKTCTW------VHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESI 180
+ I + K C + V + V+++A++ D L+ + S D +++W LE
Sbjct: 395 IWDIEKGK-CAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERY 453
Query: 181 TNAHDDAINAVALSDDG-DVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALS 239
H D++ +VA S DG + +GS DK +K+W S + H + ++A S
Sbjct: 454 -EGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFS 512
Query: 240 CDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD-----LVCSGSA 294
DGS L SG+ DRS+ W+ +++ L+GH S++ +A+ + +GS
Sbjct: 513 PDGSWLISGSKDRSVQFWDPRNGTTHMM----LQGHKNSVISVALSPKNNSHGVFATGSG 568
Query: 295 DKTIRIWR 302
D R+W+
Sbjct: 569 DFRSRLWK 576
Score = 151 (58.2 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 58/226 (25%), Positives = 97/226 (42%)
Query: 139 VHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLES-ITNAHDDA---INAVALS 194
+ H V + + D L + +R+ +I+ K + + + + D I +V S
Sbjct: 278 LQHNSVVCCVNFSNDGKYL-ATGCNRSAQIYDVDTGKKVHAFVDESEKDGDLYIRSVCFS 336
Query: 195 DDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRS 253
DG+ + TG+ DK +KVW +H+ H I +L S DG + SG+ D+
Sbjct: 337 PDGNYLATGAEDKTVKVWDIHTKKIQHTFYG----HELDIYSLDYSSDGRFIVSGSGDKK 392
Query: 254 IIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIWRGIDRNYTCL 311
+W+ E+ + G + +A+ D LV +GS D +R+W Y L
Sbjct: 393 AKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDA-QTGYF-L 450
Query: 312 AVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQIS 357
EGH V +A + D + SGSLD +K+W +S
Sbjct: 451 ERYEGHLDSVYSVAFSPDGKS---------LASGSLDKSLKLWDLS 487
>MGI|MGI:2442144 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0033276 "transcription factor TFTC complex"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:2442144
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0005669 HOVERGEN:HBG050226
KO:K03130 CTD:6877 OrthoDB:EOG469QW7 EMBL:AK031985 EMBL:AK088953
IPI:IPI00223695 RefSeq:NP_796316.2 UniGene:Mm.301522
ProteinModelPortal:Q8C092 SMR:Q8C092 STRING:Q8C092
PhosphoSite:Q8C092 PaxDb:Q8C092 PRIDE:Q8C092 DNASU:226182
GeneID:226182 KEGG:mmu:226182 UCSC:uc008hun.1 HOGENOM:HOG000212424
InParanoid:Q8C092 NextBio:378056 Genevestigator:Q8C092
GermOnline:ENSMUSG00000025049 Uniprot:Q8C092
Length = 801
Score = 182 (69.1 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 45/145 (31%), Positives = 75/145 (51%)
Query: 163 DRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHS 221
DR ++W T ++ L I H +N + + V TGSAD+ +++W GN
Sbjct: 607 DRVARLWATDHYQPLR-IFAGHLADVNCTRYHPNSNYVATGSADRTVRLWDVLNGN---- 661
Query: 222 LVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILC 281
V + H I++L S +G L +GA D +++W D G+ L+VG L+GHT ++
Sbjct: 662 CVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLW----DIGHGLMVGELKGHTDTVCS 717
Query: 282 MAVVSD--LVCSGSADKTIRIWRGI 304
+ D ++ SGS D T+R+W +
Sbjct: 718 LRFSRDGEILASGSMDNTVRLWDAV 742
Score = 122 (48.0 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 30/119 (25%), Positives = 59/119 (49%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD-V 199
H+ V+ + + + S DRT+++W + C+ T H I+++ S +G +
Sbjct: 627 HLADVNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVRIFTG-HKGPIHSLTFSPNGRFL 685
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWE 258
TG+ D ++ +W G +V L+ H + +L S DG +L SG+ D ++ +W+
Sbjct: 686 ATGATDGRVLLWDIGHG----LMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 740
Score = 56 (24.8 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 12 LTTLKGHNS--YVSSLALAGKFLYTGSSDNEVRSWDCNTFS 50
L L GH+ Y +S + +L + S D VR W TF+
Sbjct: 537 LKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFT 577
Score = 39 (18.8 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 11/45 (24%), Positives = 21/45 (46%)
Query: 53 LDQEFLSNNNIVAVGKGAVKSLVVLADK--LFSAHQDHKIRVWKI 95
+D++ S I+ G V D+ L S+ +D +R+W +
Sbjct: 529 MDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSL 573
>ZFIN|ZDB-GENE-040426-839 [details] [associations]
symbol:ciao1 "cytosolic iron-sulfur protein
assembly 1 homolog (S. cerevisiae)" species:7955 "Danio rerio"
[GO:0003674 "molecular_function" evidence=ND] [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-839 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT HSSP:P63005 CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:BX323451 EMBL:BC044534 EMBL:BC065658
EMBL:BC171538 EMBL:BC171540 IPI:IPI00496663 RefSeq:NP_956441.2
UniGene:Dr.83731 ProteinModelPortal:Q6P0D9 STRING:Q6P0D9
PRIDE:Q6P0D9 Ensembl:ENSDART00000082256 GeneID:795104
KEGG:dre:795104 InParanoid:Q6P0D9 NextBio:20932107 Bgee:Q6P0D9
Uniprot:Q6P0D9
Length = 330
Score = 186 (70.5 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 58/209 (27%), Positives = 101/209 (48%)
Query: 155 TLLYSVSWDRTIKIW-RTSD-FKCLESITNAHDDAINAVALSDDGDVYTGSA--DKKIKV 210
T L + DR I+IW + D ++C +++ H + VA S G Y SA D +
Sbjct: 29 TTLATCGGDRAIRIWGKEGDSWECKCVLSDGHQRTVRKVAWSPCGK-YLASASFDATTCI 87
Query: 211 WRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVG 270
W+++ ++ + VLE H + + +A + GS+L + + D+S+ +WE +E+D +
Sbjct: 88 WKKT--DEDFECLTVLEGHENEVKCVAWAPSGSLLATCSRDKSVWIWEVDEED-EYECLS 144
Query: 271 ALRGHTKSI--LCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAI 328
+ HT+ + + +L+ S S D I I++ D ++ C A LEGH V L
Sbjct: 145 VVNSHTQDVKHVVWHPTQELLASASYDNKICIYKEEDDDWECRATLEGHESTVWSLTFDP 204
Query: 329 DNDRCDSSDTSYLVCSGSLDCDIKVWQIS 357
+ R S CS D +K+W+ S
Sbjct: 205 EGRRLAS-------CSD--DRTVKIWKES 224
Score = 167 (63.8 bits), Expect = 6.2e-10, P = 6.2e-10
Identities = 63/249 (25%), Positives = 108/249 (43%)
Query: 83 SAHQDHKIRVWKINNQEPDHQKYTRLATLPTLGDRAIKLLMPKNHVQIRRHKTCTWVHHV 142
SAH D R W + P T LAT GDRAI++ + K H
Sbjct: 12 SAHPDS--RCWYVA-WNPAG---TTLATCG--GDRAIRIWGKEGDSW--ECKCVLSDGHQ 61
Query: 143 DAVSALALTKDETLLYSVSWDRTIKIWRTSD--FKCLESITNAHDDAINAVALSDDGDVY 200
V +A + L S S+D T IW+ +D F+CL ++ H++ + VA + G +
Sbjct: 62 RTVRKVAWSPCGKYLASASFDATTCIWKKTDEDFECL-TVLEGHENEVKCVAWAPSGSLL 120
Query: 201 -TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEK 259
T S DK + +W ++ + + V+ H + + +L S + D I ++++
Sbjct: 121 ATCSRDKSVWIWEVDEEDE-YECLSVVNSHTQDVKHVVWHPTQELLASASYDNKICIYKE 179
Query: 260 EEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIWR-------GIDRNYTC 310
E+DD L GH ++ + + + S S D+T++IW+ D ++ C
Sbjct: 180 EDDDWECRAT--LEGHESTVWSLTFDPEGRRLASCSDDRTVKIWKESTTGDGSSDESWKC 237
Query: 311 LAVLEGHRG 319
+ L G G
Sbjct: 238 ICTLSGFHG 246
Score = 130 (50.8 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 31/88 (35%), Positives = 46/88 (52%)
Query: 242 GSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSI--LCMAVVSDLVCSGSADKTIR 299
G+ L + DR+I +W KE D V + GH +++ + + + S S D T
Sbjct: 28 GTTLATCGGDRAIRIWGKEGDSWECKCVLS-DGHQRTVRKVAWSPCGKYLASASFDATTC 86
Query: 300 IWRGIDRNYTCLAVLEGHRGPVKCLAAA 327
IW+ D ++ CL VLEGH VKC+A A
Sbjct: 87 IWKKTDEDFECLTVLEGHENEVKCVAWA 114
Score = 83 (34.3 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 32/91 (35%), Positives = 44/91 (48%)
Query: 8 DHHCLTTLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVA 65
D CLT L+GH + V +A A G L T S D V W+ + E + E LS +V
Sbjct: 94 DFECLTVLEGHENEVKCVAWAPSGSLLATCSRDKSVWIWEVD---EEDEYECLS---VVN 147
Query: 66 VGKGAVKSLV--VLADKLFSAHQDHKIRVWK 94
VK +V + L SA D+KI ++K
Sbjct: 148 SHTQDVKHVVWHPTQELLASASYDNKICIYK 178
Score = 75 (31.5 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 31/134 (23%), Positives = 55/134 (41%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWR---TSD------FKCLESITNAHDDAINAV 191
H V +L + L S S DRT+KIW+ T D +KC+ +++ H I +
Sbjct: 193 HESTVWSLTFDPEGRRLASCSDDRTVKIWKESTTGDGSSDESWKCICTLSGFHGRTIYDI 252
Query: 192 ALSD-DGDVYTGSADKKIKVWRRSPGNKKHSLVDVL-----ERHNSGINALALSCDGSVL 245
A G + T D ++V+ P + L + HN +N ++ + + L
Sbjct: 253 AWCRLTGALATACGDDGVRVFSEDPTADPEQPIFALSAHVPKAHNQDVNCVSWNPKEAGL 312
Query: 246 YSGACDRS-IIVWE 258
+ D +W+
Sbjct: 313 LATCSDNGEFAIWK 326
>WB|WBGene00021074 [details] [associations]
symbol:W07E6.2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000003
GeneTree:ENSGT00690000102167 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH InterPro:IPR012972
Pfam:PF08154 EMBL:FO081752 PIR:T33805 RefSeq:NP_493745.1
ProteinModelPortal:Q9TYV3 SMR:Q9TYV3 STRING:Q9TYV3 PaxDb:Q9TYV3
EnsemblMetazoa:W07E6.2.1 EnsemblMetazoa:W07E6.2.2 GeneID:173439
KEGG:cel:CELE_W07E6.2 UCSC:W07E6.2 CTD:173439 WormBase:W07E6.2
InParanoid:Q9TYV3 NextBio:879659 Uniprot:Q9TYV3
Length = 473
Score = 190 (71.9 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 98/366 (26%), Positives = 158/366 (43%)
Query: 11 CLTTLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGK 68
C ++ GH V S + G+ L +GS D +R WD EL ++ K
Sbjct: 97 CSASIPGHGEPVISAQFSPDGRGLASGSGDQTMRIWDIEL---ELPLHTCKSH------K 147
Query: 69 GAVKSLVVLAD--KLFSAHQDHKIRVWKINNQEP------DHQKY-TRLATLPTLGDRAI 119
V + D K+ SA ++ +I +W E H+++ T LA P D
Sbjct: 148 SWVLCIAWSPDATKIASACKNGEICIWNAKTGEQIGKTLKRHKQWITSLAWQPMHKDPTC 207
Query: 120 KLLMP---KNHVQIRRHKTCTWVH----HVDAVSALALTKDETLLYSVSWDRTIKIWRTS 172
+LL ++ I T V H +V+ L E L+YS S DRT+K+WR
Sbjct: 208 RLLASCGKDGNIFIWDTVQGTVVRCLSGHTASVTCLRWG-GEGLIYSGSQDRTVKMWRAD 266
Query: 173 DFKCLESITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSG 232
D ++T H IN +AL+ D + T + + + P + R+ +
Sbjct: 267 DGVMCRNMTG-HAHWINTLALNTDYALRTSCFEPSKRCIK--PDTVEECQKVAQTRYEA- 322
Query: 233 INALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDL--VC 290
AL ++ G L SG+ D ++ +W +E +I + GH + + + D +
Sbjct: 323 --ALEIA-GGERLVSGSDDFTLFMWNPKETKQSI---NRMTGHMQLVNQVVFSPDTRYIA 376
Query: 291 SGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCD 350
S S DK++++W G Y LA L GH GPV +A + D S L+ SGS D
Sbjct: 377 SASFDKSVKLWCGRTGKY--LASLRGHVGPVYQVAWSAD---------SRLLVSGSADST 425
Query: 351 IKVWQI 356
+KV+++
Sbjct: 426 LKVFEL 431
Score = 151 (58.2 bits), Expect = 9.3e-08, P = 9.3e-08
Identities = 68/292 (23%), Positives = 126/292 (43%)
Query: 48 TFSSELDQEFLSNNNIVAVGKGAVKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYTR 107
+F SE D+ L + I+ + L +L ++L + D + + + + R
Sbjct: 10 SFVSE-DENELGGSGILVPVDISTNELQILCNQLLGSSDD-PVPISFFTTEGAEIVDSIR 67
Query: 108 LATLPTLGDRAIKLL-MPKNHVQIRRHKTCTWV--HHVDAVSALALTKDETLLYSVSWDR 164
+ + +KL+ P+ ++R C+ H + V + + D L S S D+
Sbjct: 68 KSLEEIDFETTLKLVYQPQAVFRVRPVTRCSASIPGHGEPVISAQFSPDGRGLASGSGDQ 127
Query: 165 TIKIWRTSDFKCLESITNAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLV 223
T++IW + + +H + +A S D + + + +I +W G + +
Sbjct: 128 TMRIWDI-ELELPLHTCKSHKSWVLCIAWSPDATKIASACKNGEICIWNAKTGEQ---IG 183
Query: 224 DVLERHNSGINALA---LSCDGSVLYSGAC--DRSIIVWEKEEDDGNILVVGALRGHTKS 278
L+RH I +LA + D + +C D +I +W+ + G VV L GHT S
Sbjct: 184 KTLKRHKQWITSLAWQPMHKDPTCRLLASCGKDGNIFIWDTVQ--GT--VVRCLSGHTAS 239
Query: 279 ILCMAVVSD-LVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAID 329
+ C+ + L+ SGS D+T+++WR D C + GH + LA D
Sbjct: 240 VTCLRWGGEGLIYSGSQDRTVKMWRA-DDGVMCRN-MTGHAHWINTLALNTD 289
Score = 129 (50.5 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 56/233 (24%), Positives = 97/233 (41%)
Query: 81 LFSAHQDHKIRVWKINN-----QEPDHQKYTRLATLPTLGDRAIKL--LMP-KNHVQIRR 132
++S QD +++W+ ++ H + L T D A++ P K ++
Sbjct: 251 IYSGSQDRTVKMWRADDGVMCRNMTGHAHWINTLALNT--DYALRTSCFEPSKRCIKPDT 308
Query: 133 HKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVA 192
+ C V +AL + E L+ S S D T+ +W + K + H +N V
Sbjct: 309 VEECQKVAQTRYEAALEIAGGERLV-SGSDDFTLFMWNPKETKQSINRMTGHMQLVNQVV 367
Query: 193 LSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACD 251
S D + + S DK +K+W G SL H + +A S D +L SG+ D
Sbjct: 368 FSPDTRYIASASFDKSVKLWCGRTGKYLASL----RGHVGPVYQVAWSADSRLLVSGSAD 423
Query: 252 RSIIVWEKEEDDGNILVVGALRGHTKSILCM--AVVSDLVCSGSADKTIRIWR 302
++ V+E + + L GH + + + V SG DK +++WR
Sbjct: 424 STLKVFELKTKS----LYYDLPGHGDEVFTVDWSPEGTKVVSGGKDKVLKLWR 472
>UNIPROTKB|F1SAY9 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 OMA:SIFAHDD EMBL:FP085476
EMBL:CU468902 Ensembl:ENSSSCT00000007369 Uniprot:F1SAY9
Length = 943
Score = 167 (63.8 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 74/304 (24%), Positives = 133/304 (43%)
Query: 14 TLKGHNSYVSSLALAGKFL--YTGSSDNEVRSWD-----C-NTFSSE--LDQEFLSNNNI 63
T+ GH S V +L+ + + +G++++ ++ W+ C T + E L F+ +
Sbjct: 410 TIGGHRSDVRTLSFSSDNIAVLSGAAES-IKIWNRSTLQCIRTMTCEYALCSFFVPGDRQ 468
Query: 64 VAVGKGAVK-SLVVLAD-KLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLGDRAIKL 121
V +G K L LA L H +W ++ PD + + ++ +L
Sbjct: 469 VVIGTKTGKLQLYDLASGNLLETVDAHDGALWSLS-LSPDQRGFVTGGADKSVKFWDFEL 527
Query: 122 LMPKNHVQIRRHKTCTWVHHVDA-VSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESI 180
+ +N Q R T +D V ++ + ++ LL D T+KI+ K S+
Sbjct: 528 VKDENSTQKRLSVKQTRTLQLDEEVLCVSYSPNQKLLAVSLLDCTVKIFYVDTLKFFLSL 587
Query: 181 TNAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALS 239
H + + +S DG + TGSAD+ +K+W G+ SL H+ + L
Sbjct: 588 YG-HKLPVICMDISYDGALIATGSADRNVKIWGLDFGDCHKSLF----AHDDSVMYLKFV 642
Query: 240 CDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVV--SDLVCSGSADKT 297
+ ++ DR I W+ ++ + V L GH + I C+A+ D V S S DK+
Sbjct: 643 PKSHLFFTAGKDRKIKQWDADKFEH----VQTLEGHHQEIWCLAISPSGDYVVSSSHDKS 698
Query: 298 IRIW 301
+R+W
Sbjct: 699 LRLW 702
Score = 154 (59.3 bits), Expect = 4.1e-12, Sum P(2) = 4.1e-12
Identities = 57/227 (25%), Positives = 111/227 (48%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H V L+ + D + S + + +IKIW S +C+ ++T + A+ + + D V
Sbjct: 414 HRSDVRTLSFSSDNIAVLSGAAE-SIKIWNRSTLQCIRTMTCEY--ALCSFFVPGDRQVV 470
Query: 201 TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKE 260
G+ K++++ + GN L++ ++ H+ + +L+LS D +G D+S+ W+ E
Sbjct: 471 IGTKTGKLQLYDLASGN----LLETVDAHDGALWSLSLSPDQRGFVTGGADKSVKFWDFE 526
Query: 261 --EDDGNI---LVVGALRGHT--KSILCMAVVSD--LVCSGSADKTIRIWRGIDRNYTCL 311
+D+ + L V R + +LC++ + L+ D T++I+ +D L
Sbjct: 527 LVKDENSTQKRLSVKQTRTLQLDEEVLCVSYSPNQKLLAVSLLDCTVKIFY-VDTLKFFL 585
Query: 312 AVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQISF 358
+ L GH+ PV C+ D S L+ +GS D ++K+W + F
Sbjct: 586 S-LYGHKLPVICM---------DISYDGALIATGSADRNVKIWGLDF 622
Score = 136 (52.9 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 37/123 (30%), Positives = 60/123 (48%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H V + ++ D L+ + S DR +KIW C +S+ AHDD++ + ++
Sbjct: 590 HKLPVICMDISYDGALIATGSADRNVKIWGLDFGDCHKSLF-AHDDSVMYLKFVPKSHLF 648
Query: 201 -TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEK 259
T D+KIK W K V LE H+ I LA+S G + S + D+S+ +WE+
Sbjct: 649 FTAGKDRKIKQWDAD----KFEHVQTLEGHHQEIWCLAISPSGDYVVSSSHDKSLRLWER 704
Query: 260 EED 262
+
Sbjct: 705 TRE 707
Score = 116 (45.9 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 54/227 (23%), Positives = 102/227 (44%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCL--ESITNAHDDAINAVALSDDGD 198
H A+ +L+L+ D+ + D+++K W DF+ + E+ T L D +
Sbjct: 495 HDGALWSLSLSPDQRGFVTGGADKSVKFW---DFELVKDENSTQKRLSVKQTRTLQLDEE 551
Query: 199 VY--TGSADKKIKVWRRSPGNKKHSLVDVLE------RHNSGINALALSCDGSVLYSGAC 250
V + S ++K+ K VD L+ H + + +S DG+++ +G+
Sbjct: 552 VLCVSYSPNQKLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDISYDGALIATGSA 611
Query: 251 DRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVV--SDLVCSGSADKTIRIWRGIDRNY 308
DR++ +W + D + +L H S++ + V S L + D+ I+ W D+ +
Sbjct: 612 DRNVKIWGLDFGDCH----KSLFAHDDSVMYLKFVPKSHLFFTAGKDRKIKQWDA-DK-F 665
Query: 309 TCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQ 355
+ LEGH + CLA + D Y+V S S D +++W+
Sbjct: 666 EHVQTLEGHHQEIWCLAISPSGD--------YVV-SSSHDKSLRLWE 703
Score = 88 (36.0 bits), Expect = 4.1e-12, Sum P(2) = 4.1e-12
Identities = 18/38 (47%), Positives = 24/38 (63%)
Query: 10 HCLTTLKGHNSYVSSLALAG--KFLYTGSSDNEVRSWD 45
HC T+ GH + V L L K L TG+SD+E+R+WD
Sbjct: 182 HCFKTVVGHRTEVWGLVLVSEEKRLITGASDSELRAWD 219
Score = 60 (26.2 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 26/90 (28%), Positives = 43/90 (47%)
Query: 14 TLKGHNSYVSSLA---LAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGA 70
T GH + V+SL L G+ L +GS D ++ WD S L + L + K A
Sbjct: 102 TFNGHKAAVTSLKYDQLGGR-LASGSKDTDIIVWDVIN-ESGLYR--LKGH------KDA 151
Query: 71 VKSLVVLADK--LFSAHQDHKIRVWKINNQ 98
+ + L +K L S+ +D ++ W ++ Q
Sbjct: 152 ITQALFLREKNLLVSSGKDTMVKWWDLDTQ 181
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 190 (71.9 bits), Expect = 5.6e-12, P = 5.6e-12
Identities = 58/187 (31%), Positives = 87/187 (46%)
Query: 169 WRTSDFKCLESITNAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLE 227
WR + K + HDD + L G+ + +GS D +KVW G +LV
Sbjct: 245 WRRGELKS-PKVLKGHDDHV-ITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVG--- 299
Query: 228 RHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD 287
H G+ + + +++ SG+ DR++ VW E + + L GHT ++ CM +
Sbjct: 300 -HTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGE----CIHTLYGHTSTVRCMHLHEK 352
Query: 288 LVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSL 347
V SGS D T+R+W I+ CL VL GH V+C+ D R V SG+
Sbjct: 353 RVVSGSRDATLRVW-DIETGQ-CLHVLMGHVAAVRCVQ--YDGRR---------VVSGAY 399
Query: 348 DCDIKVW 354
D +KVW
Sbjct: 400 DFMVKVW 406
Score = 184 (69.8 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 69/295 (23%), Positives = 127/295 (43%)
Query: 15 LKGHNSYV-SSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAVKS 73
LKGH+ +V + L G + +GS DN ++ W T + + + + G V S
Sbjct: 256 LKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVT--GKCLRTLVGHT-------GGVWS 306
Query: 74 LVVLADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLGDRAIKLLMPKNHVQIRRH 133
+ + + S D ++VW E H Y +T+ + +++ +R
Sbjct: 307 SQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVW 366
Query: 134 --KTCTWVH----HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDA 187
+T +H HV AV + D + S ++D +K+W CL ++ H +
Sbjct: 367 DIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTL-QGHTNR 423
Query: 188 INAVALSDDG-DVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLY 246
+ +L DG V +GS D I+VW GN H+L H S + + L ++L
Sbjct: 424 V--YSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTG----HQSLTSGMELK--DNILV 475
Query: 247 SGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIW 301
SG D ++ +W+ + + G + H ++ C+ + V + S D T+++W
Sbjct: 476 SGNADSTVKIWDIKTGQCLQTLQGPNK-HQSAVTCLQFNKNFVITSSDDGTVKLW 529
Score = 175 (66.7 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 57/187 (30%), Positives = 89/187 (47%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H V + L E + S S D T+++W +CL + H A+ V D V
Sbjct: 340 HTSTVRCMHL--HEKRVVSGSRDATLRVWDIETGQCLH-VLMGHVAAVRCVQY-DGRRVV 395
Query: 201 TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKE 260
+G+ D +KVW P + + + L+ H + + +L DG + SG+ D SI VW+ E
Sbjct: 396 SGAYDFMVKVW--DP--ETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVE 449
Query: 261 EDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEG---H 317
GN + L GH M + +++ SG+AD T++IW I + CL L+G H
Sbjct: 450 T--GNC--IHTLTGHQSLTSGMELKDNILVSGNADSTVKIW-DI-KTGQCLQTLQGPNKH 503
Query: 318 RGPVKCL 324
+ V CL
Sbjct: 504 QSAVTCL 510
Score = 146 (56.5 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 69/297 (23%), Positives = 124/297 (41%)
Query: 5 SVVDHHCLTTLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIV 64
S V CL TL GH V S + + +GS+D ++ W+ T E + +
Sbjct: 287 SAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAET--GECIHTLYGHTS-- 342
Query: 65 AVGKGAVKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTL---GDRAIKL 121
V+ + + ++ S +D +RVW I + H +A + + G R +
Sbjct: 343 -----TVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSG 397
Query: 122 LMPKNHVQIRRHKTCTWVH----HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCL 177
V++ +T T +H H + V +L D + S S D +I++W C+
Sbjct: 398 AYDFM-VKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCI 454
Query: 178 ESITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPG---------NKKHSLVDVLER 228
++T H + + L D+ + +G+AD +K+W G NK S V L+
Sbjct: 455 HTLTG-HQSLTSGMELKDN-ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQF 512
Query: 229 HNSGINALALSCDGSV----LYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILC 281
+ + + + S DG+V L +G R+++ E G VV +R ++C
Sbjct: 513 NKNFV--ITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGG---VVWRIRASNTKLVC 564
>DICTYBASE|DDB_G0279507 [details] [associations]
symbol:plrg1 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0279507 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005681 EMBL:AAFI02000031 GO:GO:0000398
KO:K12862 OMA:ITAEADK RefSeq:XP_641668.1 ProteinModelPortal:Q54WP9
STRING:Q54WP9 EnsemblProtists:DDB0233530 GeneID:8622076
KEGG:ddi:DDB_G0279507 InParanoid:Q54WP9 Uniprot:Q54WP9
Length = 516
Score = 189 (71.6 bits), Expect = 5.6e-12, P = 5.6e-12
Identities = 82/317 (25%), Positives = 144/317 (45%)
Query: 12 LTTLKGHNSYVSSLAL--AGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGK- 68
+ + GH +V ++A+ + ++ TGS+DN ++ WD S EL + G
Sbjct: 200 MRVISGHTGWVRAIAVDKSNEWFATGSTDNTIKVWDLA--SGEL--------KVTLTGHV 249
Query: 69 GAVKSLVVLADK--LFSAHQDHKIRVWKI--NNQEPDHQKYTR----LATLPTLG----- 115
A++ L V + LFS +D+K+ W + N Q ++ + + +A PTL
Sbjct: 250 SAIRGLEVSSRHPYLFSVGEDNKVLCWDLESNKQVRNYYGHRQGVYSVALHPTLDVLFSG 309
Query: 116 --DRAIKLLMPKNHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSD 173
D +++ + I K H + +L + + S S D T+K+W +
Sbjct: 310 GRDNCVRVWDMRTRANIFEMKG-----HKGTILSLKSQNADPQVISGSMDTTVKLWDLAT 364
Query: 174 FKCLESITNAHDDAINAVALSD-DGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSG 232
++TN H + ++ + + + TG+AD IK W+ G S + L HNS
Sbjct: 365 GTSAATLTN-HKKGVRSMVIHEKEYSFATGAADN-IKQWKCPDG----SFIKNLSGHNSI 418
Query: 233 INALALSCDGSVLYSGACDRSIIVWEKE-----EDDGNILVVGALRGHTKSILCMAV--V 285
INA+AL+ D +VL SG + SI W+ + + +I+ G+L G I MA
Sbjct: 419 INAMALNAD-NVLVSGGDNGSISFWDWKTGYCFQKTQSIVQPGSLEGEA-GIFDMAFDKT 476
Query: 286 SDLVCSGSADKTIRIWR 302
+ + ADKTI+ ++
Sbjct: 477 GSRLITCEADKTIKFYK 493
Score = 144 (55.7 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 64/264 (24%), Positives = 118/264 (44%)
Query: 14 TLKGHNSYVSSLALAGK--FLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAV 71
TL GH S + L ++ + +L++ DN+V WD + + ++ + + +V
Sbjct: 244 TLTGHVSAIRGLEVSSRHPYLFSVGEDNKVLCWDLES-NKQVRNYYGHRQGVYSV----- 297
Query: 72 KSLVVLADKLFSAHQDHKIRVWKINNQ----EPDHQKYTRLATLPTLGDRAIKLLMPKNH 127
+L D LFS +D+ +RVW + + E K T L+ D +
Sbjct: 298 -ALHPTLDVLFSGGRDNCVRVWDMRTRANIFEMKGHKGTILSLKSQNADPQVISGSMDTT 356
Query: 128 VQIRRHKT----CTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA 183
V++ T T +H V ++ + + E + + D IK W+ D +++++
Sbjct: 357 VKLWDLATGTSAATLTNHKKGVRSMVIHEKEYSFATGAADN-IKQWKCPDGSFIKNLSG- 414
Query: 184 HDDAINAVALSDDGDVYTGSADKKIKVWRRSPG---NKKHSLVDV--LERHNSGINALAL 238
H+ INA+AL+ D + +G + I W G K S+V LE +GI +A
Sbjct: 415 HNSIINAMALNADNVLVSGGDNGSISFWDWKTGYCFQKTQSIVQPGSLEGE-AGIFDMAF 473
Query: 239 SCDGSVLYSGACDRSIIVWEKEED 262
GS L + D++I ++++ED
Sbjct: 474 DKTGSRLITCEADKTIKFYKEDED 497
Score = 142 (55.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 52/188 (27%), Positives = 83/188 (44%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD-V 199
H V A+A+ K + S D TIK+W + + ++T H AI + +S +
Sbjct: 206 HTGWVRAIAVDKSNEWFATGSTDNTIKVWDLASGELKVTLTG-HVSAIRGLEVSSRHPYL 264
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEK 259
++ D K+ W NK+ V H G+ ++AL VL+SG D + VW+
Sbjct: 265 FSVGEDNKVLCWDLE-SNKQ---VRNYYGHRQGVYSVALHPTLDVLFSGGRDNCVRVWDM 320
Query: 260 EEDDGNILVVGALRGHTKSILCMAV--VSDLVCSGSADKTIRIWRGID-RNYTCLAVLEG 316
NI ++GH +IL + V SGS D T+++W D T A L
Sbjct: 321 RTR-ANIF---EMKGHKGTILSLKSQNADPQVISGSMDTTVKLW---DLATGTSAATLTN 373
Query: 317 HRGPVKCL 324
H+ V+ +
Sbjct: 374 HKKGVRSM 381
Score = 128 (50.1 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 49/201 (24%), Positives = 87/201 (43%)
Query: 137 TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITN--AHDDAINAVALS 194
T HV A+ L ++ L+SV D + W D + + + N H + +VAL
Sbjct: 244 TLTGHVSAIRGLEVSSRHPYLFSVGEDNKVLCW---DLESNKQVRNYYGHRQGVYSVALH 300
Query: 195 DDGDV-YTGSADKKIKVW-RRSPGNKKHSLVDVLERHNSGINAL-ALSCDGSVLYSGACD 251
DV ++G D ++VW R+ N + ++ H I +L + + D V+ SG+ D
Sbjct: 301 PTLDVLFSGGRDNCVRVWDMRTRAN-----IFEMKGHKGTILSLKSQNADPQVI-SGSMD 354
Query: 252 RSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIWRGIDRNYT 309
++ +W+ L H K + M + +G+AD I+ W+ D ++
Sbjct: 355 TTVKLWDLATGTS----AATLTNHKKGVRSMVIHEKEYSFATGAADN-IKQWKCPDGSF- 408
Query: 310 CLAVLEGHRGPVKCLAAAIDN 330
+ L GH + +A DN
Sbjct: 409 -IKNLSGHNSIINAMALNADN 428
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 190 (71.9 bits), Expect = 6.2e-12, P = 6.2e-12
Identities = 58/187 (31%), Positives = 87/187 (46%)
Query: 169 WRTSDFKCLESITNAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLE 227
WR + K + HDD + L G+ + +GS D +KVW G +LV
Sbjct: 285 WRRGELKS-PKVLKGHDDHV-ITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVG--- 339
Query: 228 RHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD 287
H G+ + + +++ SG+ DR++ VW E + + L GHT ++ CM +
Sbjct: 340 -HTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGE----CIHTLYGHTSTVRCMHLHEK 392
Query: 288 LVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSL 347
V SGS D T+R+W I+ CL VL GH V+C+ D R V SG+
Sbjct: 393 RVVSGSRDATLRVW-DIETGQ-CLHVLMGHVAAVRCVQ--YDGRR---------VVSGAY 439
Query: 348 DCDIKVW 354
D +KVW
Sbjct: 440 DFMVKVW 446
Score = 184 (69.8 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 69/295 (23%), Positives = 127/295 (43%)
Query: 15 LKGHNSYV-SSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAVKS 73
LKGH+ +V + L G + +GS DN ++ W T + + + + G V S
Sbjct: 296 LKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVT--GKCLRTLVGHT-------GGVWS 346
Query: 74 LVVLADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLGDRAIKLLMPKNHVQIRRH 133
+ + + S D ++VW E H Y +T+ + +++ +R
Sbjct: 347 SQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVW 406
Query: 134 --KTCTWVH----HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDA 187
+T +H HV AV + D + S ++D +K+W CL ++ H +
Sbjct: 407 DIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTL-QGHTNR 463
Query: 188 INAVALSDDG-DVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLY 246
+ +L DG V +GS D I+VW GN H+L H S + + L ++L
Sbjct: 464 V--YSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTG----HQSLTSGMELK--DNILV 515
Query: 247 SGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIW 301
SG D ++ +W+ + + G + H ++ C+ + V + S D T+++W
Sbjct: 516 SGNADSTVKIWDIKTGQCLQTLQGPNK-HQSAVTCLQFNKNFVITSSDDGTVKLW 569
Score = 175 (66.7 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 57/187 (30%), Positives = 89/187 (47%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H V + L E + S S D T+++W +CL + H A+ V D V
Sbjct: 380 HTSTVRCMHL--HEKRVVSGSRDATLRVWDIETGQCLH-VLMGHVAAVRCVQY-DGRRVV 435
Query: 201 TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKE 260
+G+ D +KVW P + + + L+ H + + +L DG + SG+ D SI VW+ E
Sbjct: 436 SGAYDFMVKVW--DP--ETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVE 489
Query: 261 EDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEG---H 317
GN + L GH M + +++ SG+AD T++IW I + CL L+G H
Sbjct: 490 T--GNC--IHTLTGHQSLTSGMELKDNILVSGNADSTVKIW-DI-KTGQCLQTLQGPNKH 543
Query: 318 RGPVKCL 324
+ V CL
Sbjct: 544 QSAVTCL 550
Score = 146 (56.5 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 69/297 (23%), Positives = 124/297 (41%)
Query: 5 SVVDHHCLTTLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIV 64
S V CL TL GH V S + + +GS+D ++ W+ T E + +
Sbjct: 327 SAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAET--GECIHTLYGHTS-- 382
Query: 65 AVGKGAVKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTL---GDRAIKL 121
V+ + + ++ S +D +RVW I + H +A + + G R +
Sbjct: 383 -----TVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSG 437
Query: 122 LMPKNHVQIRRHKTCTWVH----HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCL 177
V++ +T T +H H + V +L D + S S D +I++W C+
Sbjct: 438 AYDFM-VKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCI 494
Query: 178 ESITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPG---------NKKHSLVDVLER 228
++T H + + L D+ + +G+AD +K+W G NK S V L+
Sbjct: 495 HTLTG-HQSLTSGMELKDN-ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQF 552
Query: 229 HNSGINALALSCDGSV----LYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILC 281
+ + + + S DG+V L +G R+++ E G VV +R ++C
Sbjct: 553 NKNFV--ITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGG---VVWRIRASNTKLVC 604
>MGI|MGI:1354695 [details] [associations]
symbol:Fbxw7 "F-box and WD-40 domain protein 7"
species:10090 "Mus musculus" [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO] [GO:0030324 "lung
development" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=ISO] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] Reactome:REACT_93132 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1354695 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030324
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0001570
GO:GO:0019005 GO:GO:0031146 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 HOVERGEN:HBG051596 OMA:EECLHTL EMBL:AF391202
EMBL:AF391193 EMBL:AF391194 EMBL:AF391195 EMBL:AF391196
EMBL:AF391197 EMBL:AF391198 EMBL:AF391199 EMBL:AF391200
EMBL:AF391201 EMBL:AF391192 EMBL:AF427101 EMBL:BC131648
EMBL:AK032174 IPI:IPI00162935 RefSeq:NP_536353.2 UniGene:Mm.196475
ProteinModelPortal:Q8VBV4 SMR:Q8VBV4 STRING:Q8VBV4 PRIDE:Q8VBV4
Ensembl:ENSMUST00000029727 GeneID:50754 KEGG:mmu:50754
UCSC:uc008pql.2 HOGENOM:HOG000236264 NextBio:307631 Bgee:Q8VBV4
Genevestigator:Q8VBV4 GermOnline:ENSMUSG00000028086 Uniprot:Q8VBV4
Length = 629
Score = 190 (71.9 bits), Expect = 6.3e-12, P = 6.3e-12
Identities = 58/187 (31%), Positives = 87/187 (46%)
Query: 169 WRTSDFKCLESITNAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLE 227
WR + K + HDD + L G+ + +GS D +KVW G +LV
Sbjct: 287 WRRGELKS-PKVLKGHDDHV-ITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVG--- 341
Query: 228 RHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD 287
H G+ + + +++ SG+ DR++ VW E + + L GHT ++ CM +
Sbjct: 342 -HTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGE----CIHTLYGHTSTVRCMHLHEK 394
Query: 288 LVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSL 347
V SGS D T+R+W I+ CL VL GH V+C+ D R V SG+
Sbjct: 395 RVVSGSRDATLRVW-DIETGQ-CLHVLMGHVAAVRCVQ--YDGRR---------VVSGAY 441
Query: 348 DCDIKVW 354
D +KVW
Sbjct: 442 DFMVKVW 448
Score = 185 (70.2 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 69/295 (23%), Positives = 127/295 (43%)
Query: 15 LKGHNSYV-SSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAVKS 73
LKGH+ +V + L G + +GS DN ++ W T + + + + G V S
Sbjct: 298 LKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVT--GKCLRTLVGHT-------GGVWS 348
Query: 74 LVVLADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLGDRAIKLLMPKNHVQIRRH 133
+ + + S D ++VW E H Y +T+ + +++ +R
Sbjct: 349 SQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVW 408
Query: 134 --KTCTWVH----HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDA 187
+T +H HV AV + D + S ++D +K+W CL ++ H +
Sbjct: 409 DIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTL-QGHTNR 465
Query: 188 INAVALSDDG-DVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLY 246
+ +L DG V +GS D I+VW GN H+L H S + + L ++L
Sbjct: 466 V--YSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTG----HQSLTSGMELK--DNILV 517
Query: 247 SGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIW 301
SG D ++ +W+ + + G + H ++ C+ + V + S D T+++W
Sbjct: 518 SGNADSTVKIWDIKTGQCLQTLQGPSK-HQSAVTCLQFNKNFVITSSDDGTVKLW 571
Score = 175 (66.7 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 57/187 (30%), Positives = 89/187 (47%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H V + L E + S S D T+++W +CL + H A+ V D V
Sbjct: 382 HTSTVRCMHL--HEKRVVSGSRDATLRVWDIETGQCLH-VLMGHVAAVRCVQY-DGRRVV 437
Query: 201 TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKE 260
+G+ D +KVW P + + + L+ H + + +L DG + SG+ D SI VW+ E
Sbjct: 438 SGAYDFMVKVW--DP--ETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVE 491
Query: 261 EDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEG---H 317
GN + L GH M + +++ SG+AD T++IW I + CL L+G H
Sbjct: 492 T--GNC--IHTLTGHQSLTSGMELKDNILVSGNADSTVKIW-DI-KTGQCLQTLQGPSKH 545
Query: 318 RGPVKCL 324
+ V CL
Sbjct: 546 QSAVTCL 552
Score = 145 (56.1 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 68/296 (22%), Positives = 121/296 (40%)
Query: 5 SVVDHHCLTTLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIV 64
S V CL TL GH V S + + +GS+D ++ W+ T E + +
Sbjct: 329 SAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAET--GECIHTLYGHTS-- 384
Query: 65 AVGKGAVKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTL---GDRAIKL 121
V+ + + ++ S +D +RVW I + H +A + + G R +
Sbjct: 385 -----TVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSG 439
Query: 122 LMPKNHVQIRRHKTCTWVH----HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCL 177
V++ +T T +H H + V +L D + S S D +I++W C+
Sbjct: 440 AYDFM-VKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCI 496
Query: 178 ESITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALA 237
++T H + + L D+ + +G+AD +K+W G +L +H S + L
Sbjct: 497 HTLTG-HQSLTSGMELKDN-ILVSGNADSTVKIWDIKTGQCLQTLQGP-SKHQSAVTCLQ 553
Query: 238 L--------SCDGSV----LYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILC 281
S DG+V L +G R+++ E G VV +R ++C
Sbjct: 554 FNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGG---VVWRIRASNTKLVC 606
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 188 (71.2 bits), Expect = 6.7e-12, P = 6.7e-12
Identities = 74/301 (24%), Positives = 128/301 (42%)
Query: 16 KGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAVKS 73
KGH +S K L TGS D + W N F+ + +++ G S
Sbjct: 15 KGHKDVISCADFNPNNKQLATGSCDKSLMIW--NLAPKARAFRFVGHTDVIT-GVNFAPS 71
Query: 74 LVVLADKLFSAHQDHKIRVW--KINNQEPDHQKYT---RLATLPTLGDRAIKLLMPKNHV 128
++A S+ +D +R+W I + + +T R G R + K+ V
Sbjct: 72 GSLVA----SSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDKS-V 126
Query: 129 QI---RRHKTCTWVH-HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAH 184
++ R K ++ H + V + D L+ S DRT+++W TS +C+ T+ +
Sbjct: 127 KVWGVERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTD-Y 185
Query: 185 DDAINAVALSDDGDVYTGS-ADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGS 243
+ V + G S AD IK+W + + L+ + HN+G+N + G+
Sbjct: 186 GGSATFVDFNSSGTCIASSGADNTIKIW----DIRTNKLIQHYKVHNAGVNCFSFHPSGN 241
Query: 244 VLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVV--SDLVCSGSADKTIRIW 301
L SG+ D +I + + E G ++ L GH +L + DL SG AD + +W
Sbjct: 242 YLISGSSDSTIKILDLLE--GRLIYT--LHGHKGPVLTVTFSRDGDLFASGGADSQVLMW 297
Query: 302 R 302
+
Sbjct: 298 K 298
Score = 169 (64.5 bits), Expect = 9.4e-10, P = 9.4e-10
Identities = 53/246 (21%), Positives = 107/246 (43%)
Query: 116 DRAIKLLMPKNHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFK 175
D+ ++L P I+ T + H +V ++ ++D L + S D+++K+W K
Sbjct: 81 DQTVRLWTPS----IKGEST-VFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWGVERKK 135
Query: 176 CLESITNAHDDAINAVALSDDGDVYTGSADKK-IKVWRRSPGNKKHSLVDVLERHNSGIN 234
L S+ N H + + S DG + D + +++W S H +++ +
Sbjct: 136 FLYSL-NRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTS----SHQCINIFTDYGGSAT 190
Query: 235 ALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAV--VSDLVCSG 292
+ + G+ + S D +I +W+ + ++ + H + C + + + SG
Sbjct: 191 FVDFNSSGTCIASSGADNTIKIWDIRTNK----LIQHYKVHNAGVNCFSFHPSGNYLISG 246
Query: 293 SADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIK 352
S+D TI+I ++ + L GH+GPV + + D D L SG D +
Sbjct: 247 SSDSTIKILDLLEGRL--IYTLHGHKGPVLTVTFSRDGD---------LFASGGADSQVL 295
Query: 353 VWQISF 358
+W+ +F
Sbjct: 296 MWKTNF 301
Score = 134 (52.2 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 60/281 (21%), Positives = 110/281 (39%)
Query: 17 GHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAVKSL 74
GH ++ + A G + + S D VR W + + E + + +V+S+
Sbjct: 58 GHTDVITGVNFAPSGSLVASSSRDQTVRLW-----TPSIKGE----STVFKAHTASVRSV 108
Query: 75 VVLAD--KLFSAHQDHKIRVWKINNQE-----PDHQKYTRLATLPTLG--------DRAI 119
D +L +A D ++VW + ++ H + R A G DR +
Sbjct: 109 HFSRDGQRLVTASDDKSVKVWGVERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTV 168
Query: 120 KLLMPKNHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLES 179
+L +H I + + + + + T + S D TIKIW K ++
Sbjct: 169 RLWDTSSHQCIN-----IFTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIRTNKLIQH 223
Query: 180 ITNAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALAL 238
H+ +N + G+ + +GS+D IK+ G L+ L H + +
Sbjct: 224 Y-KVHNAGVNCFSFHPSGNYLISGSSDSTIKILDLLEGR----LIYTLHGHKGPVLTVTF 278
Query: 239 SCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSI 279
S DG + SG D +++W+ D N + L H+K +
Sbjct: 279 SRDGDLFASGGADSQVLMWKTNFDSLNYREL--LSKHSKRV 317
>UNIPROTKB|E1C4U3 [details] [associations]
symbol:E1C4U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:ERQNNQI EMBL:AADN02030830
EMBL:AADN02030831 IPI:IPI00579493 ProteinModelPortal:E1C4U3
Ensembl:ENSGALT00000013413 Uniprot:E1C4U3
Length = 780
Score = 182 (69.1 bits), Expect = 6.7e-12, Sum P(2) = 6.7e-12
Identities = 45/145 (31%), Positives = 75/145 (51%)
Query: 163 DRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHS 221
DR ++W T ++ L I H + + + + TGSAD+ +++W GN
Sbjct: 586 DRVARLWATDHYQPLR-IFAGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLNGN---- 640
Query: 222 LVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILC 281
V + H I++LA S +G L +GA D +++W D G+ L+VG L+GHT +I
Sbjct: 641 CVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLW----DIGHGLMVGELKGHTDTIYA 696
Query: 282 MAVVSD--LVCSGSADKTIRIWRGI 304
+ D ++ SGS D T+R+W +
Sbjct: 697 LRFSRDGEILASGSMDNTVRLWDAV 721
Score = 133 (51.9 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 33/119 (27%), Positives = 60/119 (50%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD-V 199
H+ V+ + + + S DRT+++W + C+ T H I+++A S +G +
Sbjct: 606 HLADVTCTRFHPNSNYIATGSADRTVRLWDVLNGNCVRIFTG-HKGPIHSLAFSPNGRFL 664
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWE 258
TG+ D ++ +W G +V L+ H I AL S DG +L SG+ D ++ +W+
Sbjct: 665 ATGATDGRVLLWDIGHG----LMVGELKGHTDTIYALRFSRDGEILASGSMDNTVRLWD 719
Score = 53 (23.7 bits), Expect = 6.7e-12, Sum P(2) = 6.7e-12
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 12 LTTLKGHNS--YVSSLALAGKFLYTGSSDNEVRSWDCNTFS 50
L L GH+ Y +S + +L + S D VR W TF+
Sbjct: 516 LKILYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFT 556
Score = 38 (18.4 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 11/45 (24%), Positives = 20/45 (44%)
Query: 53 LDQEFLSNNNIVAVGKGAVKSLVVLADK--LFSAHQDHKIRVWKI 95
+D++ S I+ G V D+ L S +D +R+W +
Sbjct: 508 MDEKTASELKILYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSL 552
>MGI|MGI:1914811 [details] [associations]
symbol:Wdr48 "WD repeat domain 48" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005764 "lysosome" evidence=IEA] [GO:0016579 "protein
deubiquitination" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1914811 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005764 GO:GO:0016579 KO:K15361 InterPro:IPR021772
Pfam:PF11816 UniGene:Mm.473239 CTD:57599 OrthoDB:EOG4HHP1W
GeneTree:ENSGT00520000055738 HOVERGEN:HBG079413 OMA:NRLYSAG
EMBL:AK122511 EMBL:AK012599 EMBL:AK018396 EMBL:AK030041
EMBL:AK033631 EMBL:AK035273 EMBL:AK035864 EMBL:AK043970
EMBL:BC006679 EMBL:BC048155 EMBL:BC062967 IPI:IPI00336198
IPI:IPI00659186 IPI:IPI00677198 RefSeq:NP_080512.1
ProteinModelPortal:Q8BH57 SMR:Q8BH57 STRING:Q8BH57
PhosphoSite:Q8BH57 PaxDb:Q8BH57 PRIDE:Q8BH57
Ensembl:ENSMUST00000036561 GeneID:67561 KEGG:mmu:67561
UCSC:uc009sbm.1 UCSC:uc009sbn.1 UCSC:uc009sbo.1 InParanoid:Q8BH57
NextBio:324921 Bgee:Q8BH57 CleanEx:MM_WDR48 Genevestigator:Q8BH57
GermOnline:ENSMUSG00000032512 Uniprot:Q8BH57
Length = 676
Score = 190 (71.9 bits), Expect = 7.1e-12, P = 7.1e-12
Identities = 62/224 (27%), Positives = 98/224 (43%)
Query: 143 DAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA--HDDAINAVALSDDGD-V 199
+ V+AL L L++ D I+IW + K I + H D +N V L +G +
Sbjct: 31 NGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDVVLCCNGKTL 90
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEK 259
+ S+D +KVW G + L H + ALA + D ++ S DR I +W+
Sbjct: 91 ISASSDTTVKVWNAHKG----FCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDV 146
Query: 260 EE-----DDGNILVVGALRGHTKSILCMAV--VSDLVCSGSADKTIRIWRGIDRNYTCLA 312
N + +L G+ SI +A+ + ++ SGS +K +R+W R L
Sbjct: 147 NTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWD--PRTCAKLM 204
Query: 313 VLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
L+GH VK L D +C SGS D I++W +
Sbjct: 205 KLKGHTDNVKALLLHRDGTQC---------LSGSSDGTIRLWSL 239
Score = 170 (64.9 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 53/201 (26%), Positives = 95/201 (47%)
Query: 130 IRRHKTCTWV----HHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHD 185
+ +HK ++ HH D V+ + L + L S S D T+K+W C+ ++ H
Sbjct: 59 VNQHKQDPYIASMEHHTDWVNDVVLCCNGKTLISASSDTTVKVWNAHKGFCMSTL-RTHK 117
Query: 186 DAINAVALSDDGD-VYTGSADKKIKVWRRSP-----GNKKHSLVDVLERHNSGINALALS 239
D + A+A + D + V + D++I +W + + L + I +LA++
Sbjct: 118 DYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMN 177
Query: 240 CDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD-LVC-SGSADKT 297
G+++ SG+ ++ + VW D + L+GHT ++ + + D C SGS+D T
Sbjct: 178 QLGTIIVSGSTEKVLRVW----DPRTCAKLMKLKGHTDNVKALLLHRDGTQCLSGSSDGT 233
Query: 298 IRIWR-GIDRNYTCLAVLEGH 317
IR+W G R C+A H
Sbjct: 234 IRLWSLGQQR---CIATYRVH 251
Score = 132 (51.5 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 56/219 (25%), Positives = 95/219 (43%)
Query: 12 LTTLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKG 69
+ +++ H +V+ + L GK L + SSD V+ W+ + + F + + K
Sbjct: 68 IASMEHHTDWVNDVVLCCNGKTLISASSDTTVKVWNAH-------KGFCMST--LRTHKD 118
Query: 70 AVKSLVVLADK--LFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLG--DRAIKLLM-- 123
VK+L DK + SA D +I +W +N + T G D L M
Sbjct: 119 YVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQ 178
Query: 124 ---------PKNHVQIRRHKTCTWVH----HVDAVSALALTKDETLLYSVSWDRTIKIWR 170
+ +++ +TC + H D V AL L +D T S S D TI++W
Sbjct: 179 LGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLHRDGTQCLSGSSDGTIRLWS 238
Query: 171 TSDFKCLESITNAHDDAINAVALSDD-GDVYTGSADKKI 208
+C+ + HD+ + A+ ++D VY+G D+KI
Sbjct: 239 LGQQRCIATY-RVHDEGVWALQVNDAFTHVYSGGRDRKI 276
Score = 129 (50.5 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 62/242 (25%), Positives = 98/242 (40%)
Query: 79 DKLFSAHQDHKIRVWKINNQEPD--------HQKYTRLATLPTLGDRAIKLLMPKNHVQI 130
++LF+A +D IR+W +N + D H + L G I
Sbjct: 43 NRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDVVLCCNGKTLISASSDTTVKVW 102
Query: 131 RRHKT-C--TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDA 187
HK C T H D V ALA KD+ L+ S DR I +W D L ++T A ++
Sbjct: 103 NAHKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLW---DVNTLTALT-ASNNT 158
Query: 188 INAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDV--------LERHNSGINALAL 238
+ +LS + D +Y+ + ++ + K + D L+ H + AL L
Sbjct: 159 VTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLL 218
Query: 239 SCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDL--VCSGSADK 296
DG+ SG+ D +I +W G + R H + + + V V SG D+
Sbjct: 219 HRDGTQCLSGSSDGTIRLWSL----GQQRCIATYRVHDEGVWALQVNDAFTHVYSGGRDR 274
Query: 297 TI 298
I
Sbjct: 275 KI 276
Score = 121 (47.7 bits), Expect = 0.00034, P = 0.00034
Identities = 55/251 (21%), Positives = 108/251 (43%)
Query: 32 LYTGSSDNEVRSWDCNTFSSE---LDQEFLSN--NNIVAV--GKGAVKSLVVLADKLFSA 84
L+T D+ +R W N + E ++ N++V GK + + K+++A
Sbjct: 45 LFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDVVLCCNGKTLISASSDTTVKVWNA 104
Query: 85 HQDHKIRVWKINNQEPDHQKYTRLATL-PTLG-DRAIKLLMPKNHVQIRRHK----TCTW 138
H+ + + + Y + L + G DR I L + T +
Sbjct: 105 HKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSL 164
Query: 139 VHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDG- 197
+ D++ +LA+ + T++ S S ++ +++W L + H D + A+ L DG
Sbjct: 165 SGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKL-KGHTDNVKALLLHRDGT 223
Query: 198 DVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVW 257
+GS+D I++W S G ++ + H+ G+ AL ++ + +YSG DR I
Sbjct: 224 QCLSGSSDGTIRLW--SLGQQR--CIATYRVHDEGVWALQVNDAFTHVYSGGRDRKIYCT 279
Query: 258 EKEEDDGNILV 268
+ D +L+
Sbjct: 280 DLRNPDIRVLI 290
>RGD|1309702 [details] [associations]
symbol:Wdr48 "WD repeat domain 48" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0016579
"protein deubiquitination" evidence=IEA;ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1309702 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016579 KO:K15361 InterPro:IPR021772
Pfam:PF11816 CTD:57599 OrthoDB:EOG4HHP1W
GeneTree:ENSGT00520000055738 IPI:IPI00914740 RefSeq:NP_001129367.1
UniGene:Rn.8675 PRIDE:D3Z8C7 Ensembl:ENSRNOT00000024172
GeneID:363164 KEGG:rno:363164 UCSC:RGD:1309702 OMA:RYPKENT
NextBio:682684 Uniprot:D3Z8C7
Length = 676
Score = 190 (71.9 bits), Expect = 7.1e-12, P = 7.1e-12
Identities = 62/224 (27%), Positives = 98/224 (43%)
Query: 143 DAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA--HDDAINAVALSDDGD-V 199
+ V+AL L L++ D I+IW + K I + H D +N V L +G +
Sbjct: 31 NGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDVVLCCNGKTL 90
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEK 259
+ S+D +KVW G + L H + ALA + D ++ S DR I +W+
Sbjct: 91 ISASSDTTVKVWNAHKG----FCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDV 146
Query: 260 EE-----DDGNILVVGALRGHTKSILCMAV--VSDLVCSGSADKTIRIWRGIDRNYTCLA 312
N + +L G+ SI +A+ + ++ SGS +K +R+W R L
Sbjct: 147 NTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWD--PRTCAKLM 204
Query: 313 VLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
L+GH VK L D +C SGS D I++W +
Sbjct: 205 KLKGHTDNVKALLLHRDGTQC---------LSGSSDGTIRLWSL 239
Score = 170 (64.9 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 53/201 (26%), Positives = 95/201 (47%)
Query: 130 IRRHKTCTWV----HHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHD 185
+ +HK ++ HH D V+ + L + L S S D T+K+W C+ ++ H
Sbjct: 59 VNQHKQDPYIASMEHHTDWVNDVVLCCNGKTLISASSDTTVKVWNAHKGFCMSTL-RTHK 117
Query: 186 DAINAVALSDDGD-VYTGSADKKIKVWRRSP-----GNKKHSLVDVLERHNSGINALALS 239
D + A+A + D + V + D++I +W + + L + I +LA++
Sbjct: 118 DYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMN 177
Query: 240 CDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD-LVC-SGSADKT 297
G+++ SG+ ++ + VW D + L+GHT ++ + + D C SGS+D T
Sbjct: 178 QLGTIIVSGSTEKVLRVW----DPRTCAKLMKLKGHTDNVKALLLHRDGTQCLSGSSDGT 233
Query: 298 IRIWR-GIDRNYTCLAVLEGH 317
IR+W G R C+A H
Sbjct: 234 IRLWSLGQQR---CIATYRVH 251
Score = 132 (51.5 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 56/219 (25%), Positives = 95/219 (43%)
Query: 12 LTTLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKG 69
+ +++ H +V+ + L GK L + SSD V+ W+ + + F + + K
Sbjct: 68 IASMEHHTDWVNDVVLCCNGKTLISASSDTTVKVWNAH-------KGFCMST--LRTHKD 118
Query: 70 AVKSLVVLADK--LFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLG--DRAIKLLM-- 123
VK+L DK + SA D +I +W +N + T G D L M
Sbjct: 119 YVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQ 178
Query: 124 ---------PKNHVQIRRHKTCTWVH----HVDAVSALALTKDETLLYSVSWDRTIKIWR 170
+ +++ +TC + H D V AL L +D T S S D TI++W
Sbjct: 179 LGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLHRDGTQCLSGSSDGTIRLWS 238
Query: 171 TSDFKCLESITNAHDDAINAVALSDD-GDVYTGSADKKI 208
+C+ + HD+ + A+ ++D VY+G D+KI
Sbjct: 239 LGQQRCIATY-RVHDEGVWALQVNDAFTHVYSGGRDRKI 276
Score = 129 (50.5 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 62/242 (25%), Positives = 98/242 (40%)
Query: 79 DKLFSAHQDHKIRVWKINNQEPD--------HQKYTRLATLPTLGDRAIKLLMPKNHVQI 130
++LF+A +D IR+W +N + D H + L G I
Sbjct: 43 NRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDVVLCCNGKTLISASSDTTVKVW 102
Query: 131 RRHKT-C--TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDA 187
HK C T H D V ALA KD+ L+ S DR I +W D L ++T A ++
Sbjct: 103 NAHKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLW---DVNTLTALT-ASNNT 158
Query: 188 INAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDV--------LERHNSGINALAL 238
+ +LS + D +Y+ + ++ + K + D L+ H + AL L
Sbjct: 159 VTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLL 218
Query: 239 SCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDL--VCSGSADK 296
DG+ SG+ D +I +W G + R H + + + V V SG D+
Sbjct: 219 HRDGTQCLSGSSDGTIRLWSL----GQQRCIATYRVHDEGVWALQVNDAFTHVYSGGRDR 274
Query: 297 TI 298
I
Sbjct: 275 KI 276
Score = 121 (47.7 bits), Expect = 0.00034, P = 0.00034
Identities = 55/251 (21%), Positives = 108/251 (43%)
Query: 32 LYTGSSDNEVRSWDCNTFSSE---LDQEFLSN--NNIVAV--GKGAVKSLVVLADKLFSA 84
L+T D+ +R W N + E ++ N++V GK + + K+++A
Sbjct: 45 LFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDVVLCCNGKTLISASSDTTVKVWNA 104
Query: 85 HQDHKIRVWKINNQEPDHQKYTRLATL-PTLG-DRAIKLLMPKNHVQIRRHK----TCTW 138
H+ + + + Y + L + G DR I L + T +
Sbjct: 105 HKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSL 164
Query: 139 VHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDG- 197
+ D++ +LA+ + T++ S S ++ +++W L + H D + A+ L DG
Sbjct: 165 SGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKL-KGHTDNVKALLLHRDGT 223
Query: 198 DVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVW 257
+GS+D I++W S G ++ + H+ G+ AL ++ + +YSG DR I
Sbjct: 224 QCLSGSSDGTIRLW--SLGQQR--CIATYRVHDEGVWALQVNDAFTHVYSGGRDRKIYCT 279
Query: 258 EKEEDDGNILV 268
+ D +L+
Sbjct: 280 DLRNPDIRVLI 290
>UNIPROTKB|F1P8Q5 [details] [associations]
symbol:GNB3 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-3" species:9615 "Canis lupus
familiaris" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 OMA:NMCSIYS EMBL:AAEX03015272
ProteinModelPortal:F1P8Q5 Ensembl:ENSCAFT00000023270 Uniprot:F1P8Q5
Length = 340
Score = 184 (69.8 bits), Expect = 7.1e-12, P = 7.1e-12
Identities = 72/302 (23%), Positives = 134/302 (44%)
Query: 14 TLKGHNS--YVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAV 71
TL+GH + Y A K L + S D ++ WD T ++++ L ++ ++
Sbjct: 50 TLRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYT-TNKVHAIPLRSSWVMTCAYAPS 108
Query: 72 KSLVVLA--DKLFSAH--QDHKIRVWKINNQEPDHQKYTRLATLPTLGDRAIKLLMPKN- 126
+ V D + S + + + V K++ + H Y L+ L D I
Sbjct: 109 GNFVACGGLDNMCSIYSLKSREGNV-KVSRELSAHTGY--LSCCRFLDDNNIVTSSGDTT 165
Query: 127 ----HVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITN 182
++ + KT +V H +LA++ D L S + D + K+W + C ++ T
Sbjct: 166 CALWDIETGQQKT-VFVGHTGDCMSLAVSPDFKLFISGACDASAKLWDVREGTCRQTFTG 224
Query: 183 AHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCD 241
H+ INA+ +G+ + TGS D +++ + + D E GI ++A S
Sbjct: 225 -HESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTAYSD--ESIICGITSVAFSLS 281
Query: 242 GSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIR 299
G +L++G D + +W+ + + VG L GH + C+ V +D V +GS D ++
Sbjct: 282 GRLLFAGYDDFNCNIWDSMKGER----VGILSGHDNRVSCLGVTADGMAVATGSWDSFLK 337
Query: 300 IW 301
+W
Sbjct: 338 VW 339
Score = 122 (48.0 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 51/216 (23%), Positives = 85/216 (39%)
Query: 128 VQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDA 187
VQ+R +T H+ + A+ D LL S S D + +W T + +I
Sbjct: 43 VQMRTRRTLRG--HLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIP-LRSSW 99
Query: 188 INAVALSDDGD-VYTGSADKKIKVW--RRSPGNKKHSLVDVLERHNSGINALALSCDGSV 244
+ A + G+ V G D ++ + GN K S L H ++ D ++
Sbjct: 100 VMTCAYAPSGNFVACGGLDNMCSIYSLKSREGNVKVSRE--LSAHTGYLSCCRFLDDNNI 157
Query: 245 LYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIWR 302
+ S D + +W+ E + VG HT + +AV D L SG+ D + ++W
Sbjct: 158 VTSSG-DTTCALWDIETGQQKTVFVG----HTGDCMSLAVSPDFKLFISGACDASAKLWD 212
Query: 303 GIDRNYTCLAVLEGHRGPVKCLAAAIDNDR-CDSSD 337
R TC GH + + + + C SD
Sbjct: 213 V--REGTCRQTFTGHESDINAICFFPNGEAICTGSD 246
Score = 119 (46.9 bits), Expect = 0.00019, P = 0.00019
Identities = 40/164 (24%), Positives = 68/164 (41%)
Query: 194 SDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRS 253
+D + + S D K+ VW NK H++ +S + A + G+ + G D
Sbjct: 65 TDSKLLVSASQDGKLIVWDTYTTNKVHAI----PLRSSWVMTCAYAPSGNFVACGGLDNM 120
Query: 254 IIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDL-VCSGSADKTIRIWRGIDRNYTCLA 312
++ + +GN+ V L HT + C + D + + S D T +W I+
Sbjct: 121 CSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSGDTTCALW-DIETGQQ-KT 178
Query: 313 VLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
V GH G C++ A+ D L SG+ D K+W +
Sbjct: 179 VFVGHTGD--CMSLAVSPD-------FKLFISGACDASAKLWDV 213
>UNIPROTKB|P79147 [details] [associations]
symbol:GNB3 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-3" species:9615 "Canis lupus
familiaris" [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISS] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:U52916 EMBL:AY751537 EMBL:DQ672621
RefSeq:NP_001003004.1 UniGene:Cfa.5 ProteinModelPortal:P79147
SMR:P79147 PRIDE:P79147 GeneID:403511 KEGG:cfa:403511 CTD:2784
eggNOG:NOG269251 KO:K07825 NextBio:20817024 Uniprot:P79147
Length = 340
Score = 184 (69.8 bits), Expect = 7.1e-12, P = 7.1e-12
Identities = 72/302 (23%), Positives = 134/302 (44%)
Query: 14 TLKGHNS--YVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAV 71
TL+GH + Y A K L + S D ++ WD T ++++ L ++ ++
Sbjct: 50 TLRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYT-TNKVHAIPLRSSWVMTCAYAPS 108
Query: 72 KSLVVLA--DKLFSAH--QDHKIRVWKINNQEPDHQKYTRLATLPTLGDRAIKLLMPKN- 126
+ V D + S + + + V K++ + H Y L+ L D I
Sbjct: 109 GNFVACGGLDNMCSIYSLKSREGNV-KVSRELSAHTGY--LSCCRFLDDNNIVTSSGDTT 165
Query: 127 ----HVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITN 182
++ + KT +V H +LA++ D L S + D + K+W + C ++ T
Sbjct: 166 CALWDIETGQQKT-VFVGHTGDCMSLAVSPDFKLFISGACDASAKLWDVREGTCRQTFTG 224
Query: 183 AHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCD 241
H+ INA+ +G+ + TGS D +++ + + D E GI ++A S
Sbjct: 225 -HESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTAYSD--ESIICGITSVAFSLS 281
Query: 242 GSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIR 299
G +L++G D + +W+ + + VG L GH + C+ V +D V +GS D ++
Sbjct: 282 GRLLFAGYDDFNCNIWDSMKGER----VGILSGHDNRVSCLGVTADGMAVATGSWDSFLK 337
Query: 300 IW 301
+W
Sbjct: 338 VW 339
Score = 122 (48.0 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 51/216 (23%), Positives = 85/216 (39%)
Query: 128 VQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDA 187
VQ+R +T H+ + A+ D LL S S D + +W T + +I
Sbjct: 43 VQMRTRRTLRG--HLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIP-LRSSW 99
Query: 188 INAVALSDDGD-VYTGSADKKIKVW--RRSPGNKKHSLVDVLERHNSGINALALSCDGSV 244
+ A + G+ V G D ++ + GN K S L H ++ D ++
Sbjct: 100 VMTCAYAPSGNFVACGGLDNMCSIYSLKSREGNVKVSRE--LSAHTGYLSCCRFLDDNNI 157
Query: 245 LYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIWR 302
+ S D + +W+ E + VG HT + +AV D L SG+ D + ++W
Sbjct: 158 VTSSG-DTTCALWDIETGQQKTVFVG----HTGDCMSLAVSPDFKLFISGACDASAKLWD 212
Query: 303 GIDRNYTCLAVLEGHRGPVKCLAAAIDNDR-CDSSD 337
R TC GH + + + + C SD
Sbjct: 213 V--REGTCRQTFTGHESDINAICFFPNGEAICTGSD 246
Score = 119 (46.9 bits), Expect = 0.00019, P = 0.00019
Identities = 40/164 (24%), Positives = 68/164 (41%)
Query: 194 SDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRS 253
+D + + S D K+ VW NK H++ +S + A + G+ + G D
Sbjct: 65 TDSKLLVSASQDGKLIVWDTYTTNKVHAI----PLRSSWVMTCAYAPSGNFVACGGLDNM 120
Query: 254 IIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDL-VCSGSADKTIRIWRGIDRNYTCLA 312
++ + +GN+ V L HT + C + D + + S D T +W I+
Sbjct: 121 CSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSGDTTCALW-DIETGQQ-KT 178
Query: 313 VLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
V GH G C++ A+ D L SG+ D K+W +
Sbjct: 179 VFVGHTGD--CMSLAVSPD-------FKLFISGACDASAKLWDV 213
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 190 (71.9 bits), Expect = 7.6e-12, P = 7.6e-12
Identities = 58/187 (31%), Positives = 87/187 (46%)
Query: 169 WRTSDFKCLESITNAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLE 227
WR + K + HDD + L G+ + +GS D +KVW G +LV
Sbjct: 365 WRRGELKS-PKVLKGHDDHV-ITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVG--- 419
Query: 228 RHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD 287
H G+ + + +++ SG+ DR++ VW E + + L GHT ++ CM +
Sbjct: 420 -HTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGE----CIHTLYGHTSTVRCMHLHEK 472
Query: 288 LVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSL 347
V SGS D T+R+W I+ CL VL GH V+C+ D R V SG+
Sbjct: 473 RVVSGSRDATLRVW-DIETGQ-CLHVLMGHVAAVRCVQ--YDGRR---------VVSGAY 519
Query: 348 DCDIKVW 354
D +KVW
Sbjct: 520 DFMVKVW 526
Score = 184 (69.8 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 69/295 (23%), Positives = 127/295 (43%)
Query: 15 LKGHNSYV-SSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAVKS 73
LKGH+ +V + L G + +GS DN ++ W T + + + + G V S
Sbjct: 376 LKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVT--GKCLRTLVGHT-------GGVWS 426
Query: 74 LVVLADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLGDRAIKLLMPKNHVQIRRH 133
+ + + S D ++VW E H Y +T+ + +++ +R
Sbjct: 427 SQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVW 486
Query: 134 --KTCTWVH----HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDA 187
+T +H HV AV + D + S ++D +K+W CL ++ H +
Sbjct: 487 DIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTL-QGHTNR 543
Query: 188 INAVALSDDG-DVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLY 246
+ +L DG V +GS D I+VW GN H+L H S + + L ++L
Sbjct: 544 V--YSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTG----HQSLTSGMELK--DNILV 595
Query: 247 SGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIW 301
SG D ++ +W+ + + G + H ++ C+ + V + S D T+++W
Sbjct: 596 SGNADSTVKIWDIKTGQCLQTLQGPNK-HQSAVTCLQFNKNFVITSSDDGTVKLW 649
Score = 175 (66.7 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 57/187 (30%), Positives = 89/187 (47%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H V + L E + S S D T+++W +CL + H A+ V D V
Sbjct: 460 HTSTVRCMHL--HEKRVVSGSRDATLRVWDIETGQCLH-VLMGHVAAVRCVQY-DGRRVV 515
Query: 201 TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKE 260
+G+ D +KVW P + + + L+ H + + +L DG + SG+ D SI VW+ E
Sbjct: 516 SGAYDFMVKVW--DP--ETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVE 569
Query: 261 EDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEG---H 317
GN + L GH M + +++ SG+AD T++IW I + CL L+G H
Sbjct: 570 T--GNC--IHTLTGHQSLTSGMELKDNILVSGNADSTVKIW-DI-KTGQCLQTLQGPNKH 623
Query: 318 RGPVKCL 324
+ V CL
Sbjct: 624 QSAVTCL 630
Score = 146 (56.5 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 69/297 (23%), Positives = 124/297 (41%)
Query: 5 SVVDHHCLTTLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIV 64
S V CL TL GH V S + + +GS+D ++ W+ T E + +
Sbjct: 407 SAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAET--GECIHTLYGHTS-- 462
Query: 65 AVGKGAVKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTL---GDRAIKL 121
V+ + + ++ S +D +RVW I + H +A + + G R +
Sbjct: 463 -----TVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSG 517
Query: 122 LMPKNHVQIRRHKTCTWVH----HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCL 177
V++ +T T +H H + V +L D + S S D +I++W C+
Sbjct: 518 AYDFM-VKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCI 574
Query: 178 ESITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPG---------NKKHSLVDVLER 228
++T H + + L D+ + +G+AD +K+W G NK S V L+
Sbjct: 575 HTLTG-HQSLTSGMELKDN-ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQF 632
Query: 229 HNSGINALALSCDGSV----LYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILC 281
+ + + + S DG+V L +G R+++ E G VV +R ++C
Sbjct: 633 NKNFV--ITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGG---VVWRIRASNTKLVC 684
>ZFIN|ZDB-GENE-061110-55 [details] [associations]
symbol:zgc:153492 "zgc:153492" species:7955 "Danio
rerio" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-061110-55 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR021772 Pfam:PF11816
GeneTree:ENSGT00520000055738 EMBL:CABZ01090140 EMBL:CU633479
IPI:IPI00509466 Ensembl:ENSDART00000105610 Bgee:F1R8P7
Uniprot:F1R8P7
Length = 524
Score = 188 (71.2 bits), Expect = 7.6e-12, P = 7.6e-12
Identities = 61/224 (27%), Positives = 100/224 (44%)
Query: 143 DAVSALALTKDETLLYSVSWDRTIKIWRTSDFK--CLESITNAHDDAINAVALSDDGD-V 199
+ V+AL L L++ D I+IW + K + S+ + H D +N + L +G +
Sbjct: 31 NGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKDPYIASMEH-HTDWVNDIVLCCNGKTL 89
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEK 259
+ S+D +KVW G + L H + ALA + D ++ S DR I +W+
Sbjct: 90 ISASSDTTVKVWNAHKG----FCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDV 145
Query: 260 EE-----DDGNILVVGALRGHTKSILCMAV--VSDLVCSGSADKTIRIWRGIDRNYTCLA 312
N + +L G+ SI +A+ + ++ SGS +K +R+W R L
Sbjct: 146 NTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMGTVIVSGSTEKVLRVWD--PRTCAKLM 203
Query: 313 VLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
L+GH VK L D +C SGS D I++W +
Sbjct: 204 KLKGHTDNVKSLLLNRDGTQC---------LSGSSDGTIRLWSL 238
Score = 171 (65.3 bits), Expect = 6.4e-10, P = 6.4e-10
Identities = 54/200 (27%), Positives = 94/200 (47%)
Query: 130 IRRHKT---CTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDD 186
+ +HK + HH D V+ + L + L S S D T+K+W C+ ++ H D
Sbjct: 59 VNQHKDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTL-RTHKD 117
Query: 187 AINAVALSDDGD-VYTGSADKKIKVWRRSP-----GNKKHSLVDVLERHNSGINALALSC 240
+ A+A + D + V + D++I +W + + L + I +LA++
Sbjct: 118 YVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQ 177
Query: 241 DGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD-LVC-SGSADKTI 298
G+V+ SG+ ++ + VW D + L+GHT ++ + + D C SGS+D TI
Sbjct: 178 MGTVIVSGSTEKVLRVW----DPRTCAKLMKLKGHTDNVKSLLLNRDGTQCLSGSSDGTI 233
Query: 299 RIWR-GIDRNYTCLAVLEGH 317
R+W G R C+A H
Sbjct: 234 RLWSLGQQR---CIATYRVH 250
Score = 132 (51.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 43/183 (23%), Positives = 76/183 (41%)
Query: 178 ESITNAHDDAINAVALSDD-GDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINAL 236
+ + + + +NA+ L ++T D I++W S K + +E H +N +
Sbjct: 23 DEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIW--SVNQHKDPYIASMEHHTDWVNDI 80
Query: 237 ALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSA 294
L C+G L S + D ++ VW + + LR H + +A D LV S
Sbjct: 81 VLCCNGKTLISASSDTTVKVWNAHKG----FCMSTLRTHKDYVKALAYAKDKELVASAGL 136
Query: 295 DKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDS---SDTSYLVCSGSLDCDI 351
D+ I +W D N L L V + + + D S + ++ SGS + +
Sbjct: 137 DRQIFLW---DVN--TLTALTASNNTVTTSSLSGNKDSIYSLAMNQMGTVIVSGSTEKVL 191
Query: 352 KVW 354
+VW
Sbjct: 192 RVW 194
Score = 128 (50.1 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 54/219 (24%), Positives = 95/219 (43%)
Query: 12 LTTLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKG 69
+ +++ H +V+ + L GK L + SSD V+ W+ + + F + + K
Sbjct: 67 IASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAH-------KGFCMST--LRTHKD 117
Query: 70 AVKSLVVLADK--LFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLG--DRAIKLLM-- 123
VK+L DK + SA D +I +W +N + T G D L M
Sbjct: 118 YVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQ 177
Query: 124 ---------PKNHVQIRRHKTCTWVH----HVDAVSALALTKDETLLYSVSWDRTIKIWR 170
+ +++ +TC + H D V +L L +D T S S D TI++W
Sbjct: 178 MGTVIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKSLLLNRDGTQCLSGSSDGTIRLWS 237
Query: 171 TSDFKCLESITNAHDDAINAVALSDD-GDVYTGSADKKI 208
+C+ + HD+ + A+ +++ VY+G D+KI
Sbjct: 238 LGQQRCIATY-RVHDEGVWALQVNEAFTHVYSGGRDRKI 275
Score = 128 (50.1 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 62/241 (25%), Positives = 101/241 (41%)
Query: 79 DKLFSAHQDHKIRVWKIN-NQEP------DHQKYTRLATLPTLGDRAIKLLMPKNHVQIR 131
++LF+A +D IR+W +N +++P H + L G I
Sbjct: 43 NRLFTAGRDSIIRIWSVNQHKDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWN 102
Query: 132 RHKT-C--TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAI 188
HK C T H D V ALA KD+ L+ S DR I +W D L ++T A ++ +
Sbjct: 103 AHKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLW---DVNTLTALT-ASNNTV 158
Query: 189 NAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDV--------LERHNSGINALALS 239
+LS + D +Y+ + ++ V K + D L+ H + +L L+
Sbjct: 159 TTSSLSGNKDSIYSLAMNQMGTVIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKSLLLN 218
Query: 240 CDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDL--VCSGSADKT 297
DG+ SG+ D +I +W G + R H + + + V V SG D+
Sbjct: 219 RDGTQCLSGSSDGTIRLWSL----GQQRCIATYRVHDEGVWALQVNEAFTHVYSGGRDRK 274
Query: 298 I 298
I
Sbjct: 275 I 275
Score = 120 (47.3 bits), Expect = 0.00031, P = 0.00031
Identities = 53/250 (21%), Positives = 109/250 (43%)
Query: 32 LYTGSSDNEVRSWDCNTF------SSELDQEFLSNNNIVAVGKGAVKSLVVLADKLFSAH 85
L+T D+ +R W N S E +++++ + GK + + K+++AH
Sbjct: 45 LFTAGRDSIIRIWSVNQHKDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAH 104
Query: 86 QDHKIRVWKINNQEPDHQKYTRLATL-PTLG-DRAIKLLMPKNHVQIRRHK----TCTWV 139
+ + + + Y + L + G DR I L + T +
Sbjct: 105 KGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLS 164
Query: 140 HHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDG-D 198
+ D++ +LA+ + T++ S S ++ +++W L + H D + ++ L+ DG
Sbjct: 165 GNKDSIYSLAMNQMGTVIVSGSTEKVLRVWDPRTCAKLMKL-KGHTDNVKSLLLNRDGTQ 223
Query: 199 VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWE 258
+GS+D I++W S G ++ + H+ G+ AL ++ + +YSG DR I +
Sbjct: 224 CLSGSSDGTIRLW--SLGQQR--CIATYRVHDEGVWALQVNEAFTHVYSGGRDRKIYCTD 279
Query: 259 KEEDDGNILV 268
D +L+
Sbjct: 280 LRNPDIRVLI 289
>UNIPROTKB|E2QUZ3 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 OMA:EECLHTL EMBL:AAEX03010045 RefSeq:XP_867701.2
Ensembl:ENSCAFT00000012962 GeneID:475465 KEGG:cfa:475465
NextBio:20851305 Uniprot:E2QUZ3
Length = 712
Score = 190 (71.9 bits), Expect = 7.7e-12, P = 7.7e-12
Identities = 58/187 (31%), Positives = 87/187 (46%)
Query: 169 WRTSDFKCLESITNAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLE 227
WR + K + HDD + L G+ + +GS D +KVW G +LV
Sbjct: 370 WRRGELKS-PKVLKGHDDHV-ITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVG--- 424
Query: 228 RHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD 287
H G+ + + +++ SG+ DR++ VW E + + L GHT ++ CM +
Sbjct: 425 -HTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGE----CIHTLYGHTSTVRCMHLHEK 477
Query: 288 LVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSL 347
V SGS D T+R+W I+ CL VL GH V+C+ D R V SG+
Sbjct: 478 RVVSGSRDATLRVW-DIETGQ-CLHVLMGHVAAVRCVQ--YDGRR---------VVSGAY 524
Query: 348 DCDIKVW 354
D +KVW
Sbjct: 525 DFMVKVW 531
Score = 184 (69.8 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 69/295 (23%), Positives = 127/295 (43%)
Query: 15 LKGHNSYV-SSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAVKS 73
LKGH+ +V + L G + +GS DN ++ W T + + + + G V S
Sbjct: 381 LKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVT--GKCLRTLVGHT-------GGVWS 431
Query: 74 LVVLADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLGDRAIKLLMPKNHVQIRRH 133
+ + + S D ++VW E H Y +T+ + +++ +R
Sbjct: 432 SQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVW 491
Query: 134 --KTCTWVH----HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDA 187
+T +H HV AV + D + S ++D +K+W CL ++ H +
Sbjct: 492 DIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTL-QGHTNR 548
Query: 188 INAVALSDDG-DVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLY 246
+ +L DG V +GS D I+VW GN H+L H S + + L ++L
Sbjct: 549 V--YSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTG----HQSLTSGMELK--DNILV 600
Query: 247 SGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIW 301
SG D ++ +W+ + + G + H ++ C+ + V + S D T+++W
Sbjct: 601 SGNADSTVKIWDIKTGQCLQTLQGPNK-HQSAVTCLQFNKNFVITSSDDGTVKLW 654
Score = 175 (66.7 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 57/187 (30%), Positives = 89/187 (47%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H V + L E + S S D T+++W +CL + H A+ V D V
Sbjct: 465 HTSTVRCMHL--HEKRVVSGSRDATLRVWDIETGQCLH-VLMGHVAAVRCVQY-DGRRVV 520
Query: 201 TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKE 260
+G+ D +KVW P + + + L+ H + + +L DG + SG+ D SI VW+ E
Sbjct: 521 SGAYDFMVKVW--DP--ETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVE 574
Query: 261 EDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEG---H 317
GN + L GH M + +++ SG+AD T++IW I + CL L+G H
Sbjct: 575 T--GNC--IHTLTGHQSLTSGMELKDNILVSGNADSTVKIW-DI-KTGQCLQTLQGPNKH 628
Query: 318 RGPVKCL 324
+ V CL
Sbjct: 629 QSAVTCL 635
Score = 146 (56.5 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 69/297 (23%), Positives = 124/297 (41%)
Query: 5 SVVDHHCLTTLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIV 64
S V CL TL GH V S + + +GS+D ++ W+ T E + +
Sbjct: 412 SAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAET--GECIHTLYGHTS-- 467
Query: 65 AVGKGAVKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTL---GDRAIKL 121
V+ + + ++ S +D +RVW I + H +A + + G R +
Sbjct: 468 -----TVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSG 522
Query: 122 LMPKNHVQIRRHKTCTWVH----HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCL 177
V++ +T T +H H + V +L D + S S D +I++W C+
Sbjct: 523 AYDFM-VKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCI 579
Query: 178 ESITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPG---------NKKHSLVDVLER 228
++T H + + L D+ + +G+AD +K+W G NK S V L+
Sbjct: 580 HTLTG-HQSLTSGMELKDN-ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQF 637
Query: 229 HNSGINALALSCDGSV----LYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILC 281
+ + + + S DG+V L +G R+++ E G VV +R ++C
Sbjct: 638 NKNFV--ITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGG---VVWRIRASNTKLVC 689
>UNIPROTKB|Q4R2Z6 [details] [associations]
symbol:WDR48 "WD repeat-containing protein 48" species:9541
"Macaca fascicularis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0016579 "protein deubiquitination" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005764
GO:GO:0016579 InterPro:IPR021772 Pfam:PF11816 HOVERGEN:HBG079413
EMBL:AB179472 ProteinModelPortal:Q4R2Z6 PRIDE:Q4R2Z6 Uniprot:Q4R2Z6
Length = 622
Score = 189 (71.6 bits), Expect = 8.0e-12, P = 8.0e-12
Identities = 61/224 (27%), Positives = 98/224 (43%)
Query: 143 DAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA--HDDAINAVALSDDGD-V 199
+ V+AL L L++ D I+IW + K I + H D +N + L +G +
Sbjct: 31 NGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTL 90
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEK 259
+ S+D +KVW G + L H + ALA + D ++ S DR I +W+
Sbjct: 91 ISASSDTTVKVWNAHKG----FCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDV 146
Query: 260 EE-----DDGNILVVGALRGHTKSILCMAV--VSDLVCSGSADKTIRIWRGIDRNYTCLA 312
N + +L G+ SI +A+ + ++ SGS +K +R+W R L
Sbjct: 147 NTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWD--PRTCAKLM 204
Query: 313 VLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
L+GH VK L D +C SGS D I++W +
Sbjct: 205 KLKGHTDNVKALLLNRDGTQC---------LSGSSDGTIRLWSL 239
Score = 171 (65.3 bits), Expect = 8.5e-10, P = 8.5e-10
Identities = 53/201 (26%), Positives = 95/201 (47%)
Query: 130 IRRHKTCTWV----HHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHD 185
+ +HK ++ HH D V+ + L + L S S D T+K+W C+ ++ H
Sbjct: 59 VNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTL-RTHK 117
Query: 186 DAINAVALSDDGD-VYTGSADKKIKVWRRSP-----GNKKHSLVDVLERHNSGINALALS 239
D + A+A + D + V + D++I +W + + L + I +LA++
Sbjct: 118 DYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMN 177
Query: 240 CDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD-LVC-SGSADKT 297
G+++ SG+ ++ + VW D + L+GHT ++ + + D C SGS+D T
Sbjct: 178 QLGTIIVSGSTEKVLRVW----DPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGT 233
Query: 298 IRIWR-GIDRNYTCLAVLEGH 317
IR+W G R C+A H
Sbjct: 234 IRLWSLGQQR---CIATYRVH 251
Score = 135 (52.6 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 56/219 (25%), Positives = 95/219 (43%)
Query: 12 LTTLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKG 69
+ +++ H +V+ + L GK L + SSD V+ W+ + + F + + K
Sbjct: 68 IASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAH-------KGFCMST--LRTHKD 118
Query: 70 AVKSLVVLADK--LFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLG--DRAIKLLM-- 123
VK+L DK + SA D +I +W +N + T G D L M
Sbjct: 119 YVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQ 178
Query: 124 ---------PKNHVQIRRHKTCTWVH----HVDAVSALALTKDETLLYSVSWDRTIKIWR 170
+ +++ +TC + H D V AL L +D T S S D TI++W
Sbjct: 179 LGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRLWS 238
Query: 171 TSDFKCLESITNAHDDAINAVALSDD-GDVYTGSADKKI 208
+C+ + HD+ + A+ ++D VY+G D+KI
Sbjct: 239 LGQQRCIATY-RVHDEGVWALQVNDAFTHVYSGGRDRKI 276
Score = 130 (50.8 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 62/242 (25%), Positives = 99/242 (40%)
Query: 79 DKLFSAHQDHKIRVWKINNQEPD--------HQKYTRLATLPTLGDRAIKLLMPKNHVQI 130
++LF+A +D IR+W +N + D H + L G I
Sbjct: 43 NRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVW 102
Query: 131 RRHKT-C--TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDA 187
HK C T H D V ALA KD+ L+ S DR I +W D L ++T A ++
Sbjct: 103 NAHKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLW---DVNTLTALT-ASNNT 158
Query: 188 INAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDV--------LERHNSGINALAL 238
+ +LS + D +Y+ + ++ + K + D L+ H + AL L
Sbjct: 159 VTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLL 218
Query: 239 SCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDL--VCSGSADK 296
+ DG+ SG+ D +I +W G + R H + + + V V SG D+
Sbjct: 219 NRDGTQCLSGSSDGTIRLWSL----GQQRCIATYRVHDEGVWALQVNDAFTHVYSGGRDR 274
Query: 297 TI 298
I
Sbjct: 275 KI 276
Score = 124 (48.7 bits), Expect = 0.00014, P = 0.00014
Identities = 56/251 (22%), Positives = 109/251 (43%)
Query: 32 LYTGSSDNEVRSWDCNTFSSE---LDQEFLSN--NNIVAV--GKGAVKSLVVLADKLFSA 84
L+T D+ +R W N + E ++ N+IV GK + + K+++A
Sbjct: 45 LFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNA 104
Query: 85 HQDHKIRVWKINNQEPDHQKYTRLATL-PTLG-DRAIKLLMPKNHVQIRRHK----TCTW 138
H+ + + + Y + L + G DR I L + T +
Sbjct: 105 HKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSL 164
Query: 139 VHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDG- 197
+ D++ +LA+ + T++ S S ++ +++W L + H D + A+ L+ DG
Sbjct: 165 SGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKL-KGHTDNVKALLLNRDGT 223
Query: 198 DVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVW 257
+GS+D I++W S G ++ + H+ G+ AL ++ + +YSG DR I
Sbjct: 224 QCLSGSSDGTIRLW--SLGQQR--CIATYRVHDEGVWALQVNDAFTHVYSGGRDRKIYCT 279
Query: 258 EKEEDDGNILV 268
+ D +L+
Sbjct: 280 DLRNPDIRVLI 290
>UNIPROTKB|F1MV75 [details] [associations]
symbol:WDR48 "WD repeat-containing protein 48" species:9913
"Bos taurus" [GO:0016579 "protein deubiquitination" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016579 InterPro:IPR021772
Pfam:PF11816 IPI:IPI00697548 UniGene:Bt.64382
GeneTree:ENSGT00520000055738 OMA:NRLYSAG EMBL:DAAA02053659
EMBL:DAAA02053660 EMBL:DAAA02053661 Ensembl:ENSBTAT00000004876
Uniprot:F1MV75
Length = 677
Score = 189 (71.6 bits), Expect = 9.1e-12, P = 9.1e-12
Identities = 61/224 (27%), Positives = 98/224 (43%)
Query: 143 DAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA--HDDAINAVALSDDGD-V 199
+ V+AL L L++ D I+IW + K I + H D +N + L +G +
Sbjct: 31 NGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTL 90
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEK 259
+ S+D +KVW G + L H + ALA + D ++ S DR I +W+
Sbjct: 91 ISASSDTTVKVWNAHKG----FCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDV 146
Query: 260 EE-----DDGNILVVGALRGHTKSILCMAV--VSDLVCSGSADKTIRIWRGIDRNYTCLA 312
N + +L G+ SI +A+ + ++ SGS +K +R+W R L
Sbjct: 147 NTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWD--PRTCAKLM 204
Query: 313 VLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
L+GH VK L D +C SGS D I++W +
Sbjct: 205 KLKGHTDNVKALLLNRDGTQC---------LSGSSDGTIRLWSL 239
Score = 171 (65.3 bits), Expect = 9.7e-10, P = 9.7e-10
Identities = 53/201 (26%), Positives = 95/201 (47%)
Query: 130 IRRHKTCTWV----HHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHD 185
+ +HK ++ HH D V+ + L + L S S D T+K+W C+ ++ H
Sbjct: 59 VNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTL-RTHK 117
Query: 186 DAINAVALSDDGD-VYTGSADKKIKVWRRSP-----GNKKHSLVDVLERHNSGINALALS 239
D + A+A + D + V + D++I +W + + L + I +LA++
Sbjct: 118 DYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMN 177
Query: 240 CDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD-LVC-SGSADKT 297
G+++ SG+ ++ + VW D + L+GHT ++ + + D C SGS+D T
Sbjct: 178 QLGTIIVSGSTEKVLRVW----DPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGT 233
Query: 298 IRIWR-GIDRNYTCLAVLEGH 317
IR+W G R C+A H
Sbjct: 234 IRLWSLGQQR---CIATYRVH 251
Score = 135 (52.6 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 56/219 (25%), Positives = 95/219 (43%)
Query: 12 LTTLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKG 69
+ +++ H +V+ + L GK L + SSD V+ W+ + + F + + K
Sbjct: 68 IASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAH-------KGFCMST--LRTHKD 118
Query: 70 AVKSLVVLADK--LFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLG--DRAIKLLM-- 123
VK+L DK + SA D +I +W +N + T G D L M
Sbjct: 119 YVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQ 178
Query: 124 ---------PKNHVQIRRHKTCTWVH----HVDAVSALALTKDETLLYSVSWDRTIKIWR 170
+ +++ +TC + H D V AL L +D T S S D TI++W
Sbjct: 179 LGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRLWS 238
Query: 171 TSDFKCLESITNAHDDAINAVALSDD-GDVYTGSADKKI 208
+C+ + HD+ + A+ ++D VY+G D+KI
Sbjct: 239 LGQQRCIATY-RVHDEGVWALQVNDAFTHVYSGGRDRKI 276
Score = 130 (50.8 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 62/242 (25%), Positives = 99/242 (40%)
Query: 79 DKLFSAHQDHKIRVWKINNQEPD--------HQKYTRLATLPTLGDRAIKLLMPKNHVQI 130
++LF+A +D IR+W +N + D H + L G I
Sbjct: 43 NRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVW 102
Query: 131 RRHKT-C--TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDA 187
HK C T H D V ALA KD+ L+ S DR I +W D L ++T A ++
Sbjct: 103 NAHKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLW---DVNTLTALT-ASNNT 158
Query: 188 INAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDV--------LERHNSGINALAL 238
+ +LS + D +Y+ + ++ + K + D L+ H + AL L
Sbjct: 159 VTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLL 218
Query: 239 SCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDL--VCSGSADK 296
+ DG+ SG+ D +I +W G + R H + + + V V SG D+
Sbjct: 219 NRDGTQCLSGSSDGTIRLWSL----GQQRCIATYRVHDEGVWALQVNDAFTHVYSGGRDR 274
Query: 297 TI 298
I
Sbjct: 275 KI 276
Score = 124 (48.7 bits), Expect = 0.00016, P = 0.00016
Identities = 56/251 (22%), Positives = 109/251 (43%)
Query: 32 LYTGSSDNEVRSWDCNTFSSE---LDQEFLSN--NNIVAV--GKGAVKSLVVLADKLFSA 84
L+T D+ +R W N + E ++ N+IV GK + + K+++A
Sbjct: 45 LFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNA 104
Query: 85 HQDHKIRVWKINNQEPDHQKYTRLATL-PTLG-DRAIKLLMPKNHVQIRRHK----TCTW 138
H+ + + + Y + L + G DR I L + T +
Sbjct: 105 HKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSL 164
Query: 139 VHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDG- 197
+ D++ +LA+ + T++ S S ++ +++W L + H D + A+ L+ DG
Sbjct: 165 SGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKL-KGHTDNVKALLLNRDGT 223
Query: 198 DVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVW 257
+GS+D I++W S G ++ + H+ G+ AL ++ + +YSG DR I
Sbjct: 224 QCLSGSSDGTIRLW--SLGQQR--CIATYRVHDEGVWALQVNDAFTHVYSGGRDRKIYCT 279
Query: 258 EKEEDDGNILV 268
+ D +L+
Sbjct: 280 DLRNPDIRVLI 290
>UNIPROTKB|Q32PG3 [details] [associations]
symbol:WDR48 "WD repeat-containing protein 48" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=ISS] [GO:0016579
"protein deubiquitination" evidence=ISS] [GO:0005764 "lysosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005764 GO:GO:0016579
KO:K15361 InterPro:IPR021772 Pfam:PF11816 HSSP:P63005 EMBL:BC108126
IPI:IPI00697548 RefSeq:NP_001069992.1 UniGene:Bt.64382
ProteinModelPortal:Q32PG3 STRING:Q32PG3 GeneID:618860
KEGG:bta:618860 CTD:57599 HOGENOM:HOG000007343 InParanoid:Q32PG3
OrthoDB:EOG4HHP1W NextBio:20901375 Uniprot:Q32PG3
Length = 677
Score = 189 (71.6 bits), Expect = 9.1e-12, P = 9.1e-12
Identities = 61/224 (27%), Positives = 98/224 (43%)
Query: 143 DAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA--HDDAINAVALSDDGD-V 199
+ V+AL L L++ D I+IW + K I + H D +N + L +G +
Sbjct: 31 NGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTL 90
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEK 259
+ S+D +KVW G + L H + ALA + D ++ S DR I +W+
Sbjct: 91 ISASSDTTVKVWNAHKG----FCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDV 146
Query: 260 EE-----DDGNILVVGALRGHTKSILCMAV--VSDLVCSGSADKTIRIWRGIDRNYTCLA 312
N + +L G+ SI +A+ + ++ SGS +K +R+W R L
Sbjct: 147 NTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWD--PRTCAKLM 204
Query: 313 VLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
L+GH VK L D +C SGS D I++W +
Sbjct: 205 KLKGHTDNVKALLLNRDGTQC---------LSGSSDGTIRLWSL 239
Score = 171 (65.3 bits), Expect = 9.7e-10, P = 9.7e-10
Identities = 53/201 (26%), Positives = 95/201 (47%)
Query: 130 IRRHKTCTWV----HHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHD 185
+ +HK ++ HH D V+ + L + L S S D T+K+W C+ ++ H
Sbjct: 59 VNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTL-RTHK 117
Query: 186 DAINAVALSDDGD-VYTGSADKKIKVWRRSP-----GNKKHSLVDVLERHNSGINALALS 239
D + A+A + D + V + D++I +W + + L + I +LA++
Sbjct: 118 DYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMN 177
Query: 240 CDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD-LVC-SGSADKT 297
G+++ SG+ ++ + VW D + L+GHT ++ + + D C SGS+D T
Sbjct: 178 QLGTIIVSGSTEKVLRVW----DPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGT 233
Query: 298 IRIWR-GIDRNYTCLAVLEGH 317
IR+W G R C+A H
Sbjct: 234 IRLWSLGQQR---CIATYRVH 251
Score = 135 (52.6 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 56/219 (25%), Positives = 95/219 (43%)
Query: 12 LTTLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKG 69
+ +++ H +V+ + L GK L + SSD V+ W+ + + F + + K
Sbjct: 68 IASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAH-------KGFCMST--LRTHKD 118
Query: 70 AVKSLVVLADK--LFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLG--DRAIKLLM-- 123
VK+L DK + SA D +I +W +N + T G D L M
Sbjct: 119 YVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQ 178
Query: 124 ---------PKNHVQIRRHKTCTWVH----HVDAVSALALTKDETLLYSVSWDRTIKIWR 170
+ +++ +TC + H D V AL L +D T S S D TI++W
Sbjct: 179 LGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRLWS 238
Query: 171 TSDFKCLESITNAHDDAINAVALSDD-GDVYTGSADKKI 208
+C+ + HD+ + A+ ++D VY+G D+KI
Sbjct: 239 LGQQRCIATY-RVHDEGVWALQVNDAFTHVYSGGRDRKI 276
Score = 130 (50.8 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 62/242 (25%), Positives = 99/242 (40%)
Query: 79 DKLFSAHQDHKIRVWKINNQEPD--------HQKYTRLATLPTLGDRAIKLLMPKNHVQI 130
++LF+A +D IR+W +N + D H + L G I
Sbjct: 43 NRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVW 102
Query: 131 RRHKT-C--TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDA 187
HK C T H D V ALA KD+ L+ S DR I +W D L ++T A ++
Sbjct: 103 NAHKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLW---DVNTLTALT-ASNNT 158
Query: 188 INAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDV--------LERHNSGINALAL 238
+ +LS + D +Y+ + ++ + K + D L+ H + AL L
Sbjct: 159 VTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLL 218
Query: 239 SCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDL--VCSGSADK 296
+ DG+ SG+ D +I +W G + R H + + + V V SG D+
Sbjct: 219 NRDGTQCLSGSSDGTIRLWSL----GQQRCIATYRVHDEGVWALQVNDAFTHVYSGGRDR 274
Query: 297 TI 298
I
Sbjct: 275 KI 276
Score = 124 (48.7 bits), Expect = 0.00016, P = 0.00016
Identities = 56/251 (22%), Positives = 109/251 (43%)
Query: 32 LYTGSSDNEVRSWDCNTFSSE---LDQEFLSN--NNIVAV--GKGAVKSLVVLADKLFSA 84
L+T D+ +R W N + E ++ N+IV GK + + K+++A
Sbjct: 45 LFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNA 104
Query: 85 HQDHKIRVWKINNQEPDHQKYTRLATL-PTLG-DRAIKLLMPKNHVQIRRHK----TCTW 138
H+ + + + Y + L + G DR I L + T +
Sbjct: 105 HKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSL 164
Query: 139 VHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDG- 197
+ D++ +LA+ + T++ S S ++ +++W L + H D + A+ L+ DG
Sbjct: 165 SGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKL-KGHTDNVKALLLNRDGT 223
Query: 198 DVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVW 257
+GS+D I++W S G ++ + H+ G+ AL ++ + +YSG DR I
Sbjct: 224 QCLSGSSDGTIRLW--SLGQQR--CIATYRVHDEGVWALQVNDAFTHVYSGGRDRKIYCT 279
Query: 258 EKEEDDGNILV 268
+ D +L+
Sbjct: 280 DLRNPDIRVLI 290
>UNIPROTKB|E2RJ50 [details] [associations]
symbol:WDR48 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016579 "protein deubiquitination"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016579
KO:K15361 InterPro:IPR021772 Pfam:PF11816 CTD:57599
GeneTree:ENSGT00520000055738 OMA:NRLYSAG EMBL:AAEX03013494
RefSeq:XP_860103.1 ProteinModelPortal:E2RJ50 SMR:E2RJ50
PRIDE:E2RJ50 Ensembl:ENSCAFT00000008168 GeneID:477027
KEGG:cfa:477027 NextBio:20852578 Uniprot:E2RJ50
Length = 677
Score = 189 (71.6 bits), Expect = 9.1e-12, P = 9.1e-12
Identities = 61/224 (27%), Positives = 98/224 (43%)
Query: 143 DAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA--HDDAINAVALSDDGD-V 199
+ V+AL L L++ D I+IW + K I + H D +N + L +G +
Sbjct: 31 NGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTL 90
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEK 259
+ S+D +KVW G + L H + ALA + D ++ S DR I +W+
Sbjct: 91 ISASSDTTVKVWNAHKG----FCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDV 146
Query: 260 EE-----DDGNILVVGALRGHTKSILCMAV--VSDLVCSGSADKTIRIWRGIDRNYTCLA 312
N + +L G+ SI +A+ + ++ SGS +K +R+W R L
Sbjct: 147 NTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWD--PRTCAKLM 204
Query: 313 VLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
L+GH VK L D +C SGS D I++W +
Sbjct: 205 KLKGHTDNVKALLLNRDGTQC---------LSGSSDGTIRLWSL 239
Score = 171 (65.3 bits), Expect = 9.7e-10, P = 9.7e-10
Identities = 53/201 (26%), Positives = 95/201 (47%)
Query: 130 IRRHKTCTWV----HHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHD 185
+ +HK ++ HH D V+ + L + L S S D T+K+W C+ ++ H
Sbjct: 59 VNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTL-RTHK 117
Query: 186 DAINAVALSDDGD-VYTGSADKKIKVWRRSP-----GNKKHSLVDVLERHNSGINALALS 239
D + A+A + D + V + D++I +W + + L + I +LA++
Sbjct: 118 DYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMN 177
Query: 240 CDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD-LVC-SGSADKT 297
G+++ SG+ ++ + VW D + L+GHT ++ + + D C SGS+D T
Sbjct: 178 QLGTIIVSGSTEKVLRVW----DPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGT 233
Query: 298 IRIWR-GIDRNYTCLAVLEGH 317
IR+W G R C+A H
Sbjct: 234 IRLWSLGQQR---CIATYRVH 251
Score = 135 (52.6 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 56/219 (25%), Positives = 95/219 (43%)
Query: 12 LTTLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKG 69
+ +++ H +V+ + L GK L + SSD V+ W+ + + F + + K
Sbjct: 68 IASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAH-------KGFCMST--LRTHKD 118
Query: 70 AVKSLVVLADK--LFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLG--DRAIKLLM-- 123
VK+L DK + SA D +I +W +N + T G D L M
Sbjct: 119 YVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQ 178
Query: 124 ---------PKNHVQIRRHKTCTWVH----HVDAVSALALTKDETLLYSVSWDRTIKIWR 170
+ +++ +TC + H D V AL L +D T S S D TI++W
Sbjct: 179 LGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRLWS 238
Query: 171 TSDFKCLESITNAHDDAINAVALSDD-GDVYTGSADKKI 208
+C+ + HD+ + A+ ++D VY+G D+KI
Sbjct: 239 LGQQRCIATY-RVHDEGVWALQVNDAFTHVYSGGRDRKI 276
Score = 130 (50.8 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 62/242 (25%), Positives = 99/242 (40%)
Query: 79 DKLFSAHQDHKIRVWKINNQEPD--------HQKYTRLATLPTLGDRAIKLLMPKNHVQI 130
++LF+A +D IR+W +N + D H + L G I
Sbjct: 43 NRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVW 102
Query: 131 RRHKT-C--TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDA 187
HK C T H D V ALA KD+ L+ S DR I +W D L ++T A ++
Sbjct: 103 NAHKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLW---DVNTLTALT-ASNNT 158
Query: 188 INAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDV--------LERHNSGINALAL 238
+ +LS + D +Y+ + ++ + K + D L+ H + AL L
Sbjct: 159 VTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLL 218
Query: 239 SCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDL--VCSGSADK 296
+ DG+ SG+ D +I +W G + R H + + + V V SG D+
Sbjct: 219 NRDGTQCLSGSSDGTIRLWSL----GQQRCIATYRVHDEGVWALQVNDAFTHVYSGGRDR 274
Query: 297 TI 298
I
Sbjct: 275 KI 276
Score = 124 (48.7 bits), Expect = 0.00016, P = 0.00016
Identities = 56/251 (22%), Positives = 109/251 (43%)
Query: 32 LYTGSSDNEVRSWDCNTFSSE---LDQEFLSN--NNIVAV--GKGAVKSLVVLADKLFSA 84
L+T D+ +R W N + E ++ N+IV GK + + K+++A
Sbjct: 45 LFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNA 104
Query: 85 HQDHKIRVWKINNQEPDHQKYTRLATL-PTLG-DRAIKLLMPKNHVQIRRHK----TCTW 138
H+ + + + Y + L + G DR I L + T +
Sbjct: 105 HKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSL 164
Query: 139 VHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDG- 197
+ D++ +LA+ + T++ S S ++ +++W L + H D + A+ L+ DG
Sbjct: 165 SGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKL-KGHTDNVKALLLNRDGT 223
Query: 198 DVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVW 257
+GS+D I++W S G ++ + H+ G+ AL ++ + +YSG DR I
Sbjct: 224 QCLSGSSDGTIRLW--SLGQQR--CIATYRVHDEGVWALQVNDAFTHVYSGGRDRKIYCT 279
Query: 258 EKEEDDGNILV 268
+ D +L+
Sbjct: 280 DLRNPDIRVLI 290
>UNIPROTKB|Q8TAF3 [details] [associations]
symbol:WDR48 "WD repeat-containing protein 48" species:9606
"Homo sapiens" [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0005764 "lysosome" evidence=IEA] [GO:0016579 "protein
deubiquitination" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0019048 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005764 GO:GO:0016579
KO:K15361 InterPro:IPR021772 Pfam:PF11816 CTD:57599
OrthoDB:EOG4HHP1W HOVERGEN:HBG079413 OMA:NRLYSAG EMBL:AF468833
EMBL:AB040882 EMBL:AK297349 EMBL:AK298810 EMBL:AK302307
EMBL:AL162064 EMBL:AL832926 EMBL:BX649170 EMBL:BC026353
EMBL:BC037168 IPI:IPI00658079 IPI:IPI00658210 IPI:IPI00791758
IPI:IPI00792902 IPI:IPI00937128 PIR:T47168 RefSeq:NP_065890.1
UniGene:Hs.109778 ProteinModelPortal:Q8TAF3 SMR:Q8TAF3
IntAct:Q8TAF3 STRING:Q8TAF3 PhosphoSite:Q8TAF3 DMDM:74760390
PaxDb:Q8TAF3 PeptideAtlas:Q8TAF3 PRIDE:Q8TAF3
Ensembl:ENST00000302313 Ensembl:ENST00000396258
Ensembl:ENST00000544962 GeneID:57599 KEGG:hsa:57599 UCSC:uc003cit.3
UCSC:uc011ayt.1 UCSC:uc011ayu.1 UCSC:uc011ayv.1
GeneCards:GC03P039069 HGNC:HGNC:30914 HPA:HPA038421 MIM:612167
neXtProt:NX_Q8TAF3 PharmGKB:PA134956949 InParanoid:Q8TAF3
ChiTaRS:WDR48 GenomeRNAi:57599 NextBio:64214 ArrayExpress:Q8TAF3
Bgee:Q8TAF3 CleanEx:HS_WDR48 Genevestigator:Q8TAF3
GermOnline:ENSG00000114742 Uniprot:Q8TAF3
Length = 677
Score = 189 (71.6 bits), Expect = 9.1e-12, P = 9.1e-12
Identities = 61/224 (27%), Positives = 98/224 (43%)
Query: 143 DAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA--HDDAINAVALSDDGD-V 199
+ V+AL L L++ D I+IW + K I + H D +N + L +G +
Sbjct: 31 NGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTL 90
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEK 259
+ S+D +KVW G + L H + ALA + D ++ S DR I +W+
Sbjct: 91 ISASSDTTVKVWNAHKG----FCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDV 146
Query: 260 EE-----DDGNILVVGALRGHTKSILCMAV--VSDLVCSGSADKTIRIWRGIDRNYTCLA 312
N + +L G+ SI +A+ + ++ SGS +K +R+W R L
Sbjct: 147 NTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWD--PRTCAKLM 204
Query: 313 VLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
L+GH VK L D +C SGS D I++W +
Sbjct: 205 KLKGHTDNVKALLLNRDGTQC---------LSGSSDGTIRLWSL 239
Score = 171 (65.3 bits), Expect = 9.7e-10, P = 9.7e-10
Identities = 53/201 (26%), Positives = 95/201 (47%)
Query: 130 IRRHKTCTWV----HHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHD 185
+ +HK ++ HH D V+ + L + L S S D T+K+W C+ ++ H
Sbjct: 59 VNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTL-RTHK 117
Query: 186 DAINAVALSDDGD-VYTGSADKKIKVWRRSP-----GNKKHSLVDVLERHNSGINALALS 239
D + A+A + D + V + D++I +W + + L + I +LA++
Sbjct: 118 DYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMN 177
Query: 240 CDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD-LVC-SGSADKT 297
G+++ SG+ ++ + VW D + L+GHT ++ + + D C SGS+D T
Sbjct: 178 QLGTIIVSGSTEKVLRVW----DPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGT 233
Query: 298 IRIWR-GIDRNYTCLAVLEGH 317
IR+W G R C+A H
Sbjct: 234 IRLWSLGQQR---CIATYRVH 251
Score = 135 (52.6 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 56/219 (25%), Positives = 95/219 (43%)
Query: 12 LTTLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKG 69
+ +++ H +V+ + L GK L + SSD V+ W+ + + F + + K
Sbjct: 68 IASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAH-------KGFCMST--LRTHKD 118
Query: 70 AVKSLVVLADK--LFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLG--DRAIKLLM-- 123
VK+L DK + SA D +I +W +N + T G D L M
Sbjct: 119 YVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQ 178
Query: 124 ---------PKNHVQIRRHKTCTWVH----HVDAVSALALTKDETLLYSVSWDRTIKIWR 170
+ +++ +TC + H D V AL L +D T S S D TI++W
Sbjct: 179 LGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRLWS 238
Query: 171 TSDFKCLESITNAHDDAINAVALSDD-GDVYTGSADKKI 208
+C+ + HD+ + A+ ++D VY+G D+KI
Sbjct: 239 LGQQRCIATY-RVHDEGVWALQVNDAFTHVYSGGRDRKI 276
Score = 130 (50.8 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 62/242 (25%), Positives = 99/242 (40%)
Query: 79 DKLFSAHQDHKIRVWKINNQEPD--------HQKYTRLATLPTLGDRAIKLLMPKNHVQI 130
++LF+A +D IR+W +N + D H + L G I
Sbjct: 43 NRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVW 102
Query: 131 RRHKT-C--TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDA 187
HK C T H D V ALA KD+ L+ S DR I +W D L ++T A ++
Sbjct: 103 NAHKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLW---DVNTLTALT-ASNNT 158
Query: 188 INAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDV--------LERHNSGINALAL 238
+ +LS + D +Y+ + ++ + K + D L+ H + AL L
Sbjct: 159 VTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLL 218
Query: 239 SCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDL--VCSGSADK 296
+ DG+ SG+ D +I +W G + R H + + + V V SG D+
Sbjct: 219 NRDGTQCLSGSSDGTIRLWSL----GQQRCIATYRVHDEGVWALQVNDAFTHVYSGGRDR 274
Query: 297 TI 298
I
Sbjct: 275 KI 276
Score = 124 (48.7 bits), Expect = 0.00016, P = 0.00016
Identities = 56/251 (22%), Positives = 109/251 (43%)
Query: 32 LYTGSSDNEVRSWDCNTFSSE---LDQEFLSN--NNIVAV--GKGAVKSLVVLADKLFSA 84
L+T D+ +R W N + E ++ N+IV GK + + K+++A
Sbjct: 45 LFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNA 104
Query: 85 HQDHKIRVWKINNQEPDHQKYTRLATL-PTLG-DRAIKLLMPKNHVQIRRHK----TCTW 138
H+ + + + Y + L + G DR I L + T +
Sbjct: 105 HKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSL 164
Query: 139 VHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDG- 197
+ D++ +LA+ + T++ S S ++ +++W L + H D + A+ L+ DG
Sbjct: 165 SGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKL-KGHTDNVKALLLNRDGT 223
Query: 198 DVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVW 257
+GS+D I++W S G ++ + H+ G+ AL ++ + +YSG DR I
Sbjct: 224 QCLSGSSDGTIRLW--SLGQQR--CIATYRVHDEGVWALQVNDAFTHVYSGGRDRKIYCT 279
Query: 258 EKEEDDGNILV 268
+ D +L+
Sbjct: 280 DLRNPDIRVLI 290
>UNIPROTKB|F2Z5V5 [details] [associations]
symbol:WDR48 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016579 "protein deubiquitination" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016579 KO:K15361
InterPro:IPR021772 Pfam:PF11816 CTD:57599
GeneTree:ENSGT00520000055738 OMA:NRLYSAG EMBL:CU856480
RefSeq:XP_003132167.1 UniGene:Ssc.3296 ProteinModelPortal:F2Z5V5
SMR:F2Z5V5 PRIDE:F2Z5V5 Ensembl:ENSSSCT00000012329 GeneID:100518629
KEGG:ssc:100518629 Uniprot:F2Z5V5
Length = 677
Score = 189 (71.6 bits), Expect = 9.1e-12, P = 9.1e-12
Identities = 61/224 (27%), Positives = 98/224 (43%)
Query: 143 DAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA--HDDAINAVALSDDGD-V 199
+ V+AL L L++ D I+IW + K I + H D +N + L +G +
Sbjct: 31 NGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTL 90
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEK 259
+ S+D +KVW G + L H + ALA + D ++ S DR I +W+
Sbjct: 91 ISASSDTTVKVWNAHKG----FCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDV 146
Query: 260 EE-----DDGNILVVGALRGHTKSILCMAV--VSDLVCSGSADKTIRIWRGIDRNYTCLA 312
N + +L G+ SI +A+ + ++ SGS +K +R+W R L
Sbjct: 147 NTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWD--PRTCAKLM 204
Query: 313 VLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
L+GH VK L D +C SGS D I++W +
Sbjct: 205 KLKGHTDNVKALLLNRDGTQC---------LSGSSDGTIRLWSL 239
Score = 171 (65.3 bits), Expect = 9.7e-10, P = 9.7e-10
Identities = 53/201 (26%), Positives = 95/201 (47%)
Query: 130 IRRHKTCTWV----HHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHD 185
+ +HK ++ HH D V+ + L + L S S D T+K+W C+ ++ H
Sbjct: 59 VNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTL-RTHK 117
Query: 186 DAINAVALSDDGD-VYTGSADKKIKVWRRSP-----GNKKHSLVDVLERHNSGINALALS 239
D + A+A + D + V + D++I +W + + L + I +LA++
Sbjct: 118 DYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMN 177
Query: 240 CDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD-LVC-SGSADKT 297
G+++ SG+ ++ + VW D + L+GHT ++ + + D C SGS+D T
Sbjct: 178 QLGTIIVSGSTEKVLRVW----DPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGT 233
Query: 298 IRIWR-GIDRNYTCLAVLEGH 317
IR+W G R C+A H
Sbjct: 234 IRLWSLGQQR---CIATYRVH 251
Score = 135 (52.6 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 56/219 (25%), Positives = 95/219 (43%)
Query: 12 LTTLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKG 69
+ +++ H +V+ + L GK L + SSD V+ W+ + + F + + K
Sbjct: 68 IASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAH-------KGFCMST--LRTHKD 118
Query: 70 AVKSLVVLADK--LFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLG--DRAIKLLM-- 123
VK+L DK + SA D +I +W +N + T G D L M
Sbjct: 119 YVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQ 178
Query: 124 ---------PKNHVQIRRHKTCTWVH----HVDAVSALALTKDETLLYSVSWDRTIKIWR 170
+ +++ +TC + H D V AL L +D T S S D TI++W
Sbjct: 179 LGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRLWS 238
Query: 171 TSDFKCLESITNAHDDAINAVALSDD-GDVYTGSADKKI 208
+C+ + HD+ + A+ ++D VY+G D+KI
Sbjct: 239 LGQQRCIATY-RVHDEGVWALQVNDAFTHVYSGGRDRKI 276
Score = 130 (50.8 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 62/242 (25%), Positives = 99/242 (40%)
Query: 79 DKLFSAHQDHKIRVWKINNQEPD--------HQKYTRLATLPTLGDRAIKLLMPKNHVQI 130
++LF+A +D IR+W +N + D H + L G I
Sbjct: 43 NRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVW 102
Query: 131 RRHKT-C--TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDA 187
HK C T H D V ALA KD+ L+ S DR I +W D L ++T A ++
Sbjct: 103 NAHKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLW---DVNTLTALT-ASNNT 158
Query: 188 INAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDV--------LERHNSGINALAL 238
+ +LS + D +Y+ + ++ + K + D L+ H + AL L
Sbjct: 159 VTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLL 218
Query: 239 SCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDL--VCSGSADK 296
+ DG+ SG+ D +I +W G + R H + + + V V SG D+
Sbjct: 219 NRDGTQCLSGSSDGTIRLWSL----GQQRCIATYRVHDEGVWALQVNDAFTHVYSGGRDR 274
Query: 297 TI 298
I
Sbjct: 275 KI 276
Score = 124 (48.7 bits), Expect = 0.00016, P = 0.00016
Identities = 56/251 (22%), Positives = 109/251 (43%)
Query: 32 LYTGSSDNEVRSWDCNTFSSE---LDQEFLSN--NNIVAV--GKGAVKSLVVLADKLFSA 84
L+T D+ +R W N + E ++ N+IV GK + + K+++A
Sbjct: 45 LFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNA 104
Query: 85 HQDHKIRVWKINNQEPDHQKYTRLATL-PTLG-DRAIKLLMPKNHVQIRRHK----TCTW 138
H+ + + + Y + L + G DR I L + T +
Sbjct: 105 HKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSL 164
Query: 139 VHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDG- 197
+ D++ +LA+ + T++ S S ++ +++W L + H D + A+ L+ DG
Sbjct: 165 SGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKL-KGHTDNVKALLLNRDGT 223
Query: 198 DVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVW 257
+GS+D I++W S G ++ + H+ G+ AL ++ + +YSG DR I
Sbjct: 224 QCLSGSSDGTIRLW--SLGQQR--CIATYRVHDEGVWALQVNDAFTHVYSGGRDRKIYCT 279
Query: 258 EKEEDDGNILV 268
+ D +L+
Sbjct: 280 DLRNPDIRVLI 290
>UNIPROTKB|Q5RAW8 [details] [associations]
symbol:WDR48 "WD repeat-containing protein 48" species:9601
"Pongo abelii" [GO:0005634 "nucleus" evidence=ISS] [GO:0016579
"protein deubiquitination" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005764 GO:GO:0016579
KO:K15361 InterPro:IPR021772 Pfam:PF11816 CTD:57599
OrthoDB:EOG4HHP1W GeneTree:ENSGT00520000055738 HOVERGEN:HBG079413
OMA:NRLYSAG EMBL:CR858893 RefSeq:NP_001125636.1 UniGene:Pab.18183
ProteinModelPortal:Q5RAW8 Ensembl:ENSPPYT00000016282
GeneID:100172554 KEGG:pon:100172554 InParanoid:Q5RAW8
Uniprot:Q5RAW8
Length = 677
Score = 189 (71.6 bits), Expect = 9.1e-12, P = 9.1e-12
Identities = 61/224 (27%), Positives = 98/224 (43%)
Query: 143 DAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA--HDDAINAVALSDDGD-V 199
+ V+AL L L++ D I+IW + K I + H D +N + L +G +
Sbjct: 31 NGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTL 90
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEK 259
+ S+D +KVW G + L H + ALA + D ++ S DR I +W+
Sbjct: 91 ISASSDTTVKVWNAHKG----FCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDV 146
Query: 260 EE-----DDGNILVVGALRGHTKSILCMAV--VSDLVCSGSADKTIRIWRGIDRNYTCLA 312
N + +L G+ SI +A+ + ++ SGS +K +R+W R L
Sbjct: 147 NTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWD--PRTCAKLM 204
Query: 313 VLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
L+GH VK L D +C SGS D I++W +
Sbjct: 205 KLKGHTDNVKALLLNRDGTQC---------LSGSSDGTIRLWSL 239
Score = 171 (65.3 bits), Expect = 9.7e-10, P = 9.7e-10
Identities = 53/201 (26%), Positives = 95/201 (47%)
Query: 130 IRRHKTCTWV----HHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHD 185
+ +HK ++ HH D V+ + L + L S S D T+K+W C+ ++ H
Sbjct: 59 VNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTL-RTHK 117
Query: 186 DAINAVALSDDGD-VYTGSADKKIKVWRRSP-----GNKKHSLVDVLERHNSGINALALS 239
D + A+A + D + V + D++I +W + + L + I +LA++
Sbjct: 118 DYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMN 177
Query: 240 CDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD-LVC-SGSADKT 297
G+++ SG+ ++ + VW D + L+GHT ++ + + D C SGS+D T
Sbjct: 178 QLGTIIVSGSTEKVLRVW----DPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGT 233
Query: 298 IRIWR-GIDRNYTCLAVLEGH 317
IR+W G R C+A H
Sbjct: 234 IRLWSLGQQR---CIATYRVH 251
Score = 135 (52.6 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 56/219 (25%), Positives = 95/219 (43%)
Query: 12 LTTLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKG 69
+ +++ H +V+ + L GK L + SSD V+ W+ + + F + + K
Sbjct: 68 IASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAH-------KGFCMST--LRTHKD 118
Query: 70 AVKSLVVLADK--LFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLG--DRAIKLLM-- 123
VK+L DK + SA D +I +W +N + T G D L M
Sbjct: 119 YVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQ 178
Query: 124 ---------PKNHVQIRRHKTCTWVH----HVDAVSALALTKDETLLYSVSWDRTIKIWR 170
+ +++ +TC + H D V AL L +D T S S D TI++W
Sbjct: 179 LGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRLWS 238
Query: 171 TSDFKCLESITNAHDDAINAVALSDD-GDVYTGSADKKI 208
+C+ + HD+ + A+ ++D VY+G D+KI
Sbjct: 239 LGQQRCIATY-RVHDEGVWALQVNDAFTHVYSGGRDRKI 276
Score = 130 (50.8 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 62/242 (25%), Positives = 99/242 (40%)
Query: 79 DKLFSAHQDHKIRVWKINNQEPD--------HQKYTRLATLPTLGDRAIKLLMPKNHVQI 130
++LF+A +D IR+W +N + D H + L G I
Sbjct: 43 NRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVW 102
Query: 131 RRHKT-C--TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDA 187
HK C T H D V ALA KD+ L+ S DR I +W D L ++T A ++
Sbjct: 103 NAHKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLW---DVNTLTALT-ASNNT 158
Query: 188 INAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDV--------LERHNSGINALAL 238
+ +LS + D +Y+ + ++ + K + D L+ H + AL L
Sbjct: 159 VTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLL 218
Query: 239 SCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDL--VCSGSADK 296
+ DG+ SG+ D +I +W G + R H + + + V V SG D+
Sbjct: 219 NRDGTQCLSGSSDGTIRLWSL----GQQRCIATYRVHDEGVWALQVNDAFTHVYSGGRDR 274
Query: 297 TI 298
I
Sbjct: 275 KI 276
Score = 124 (48.7 bits), Expect = 0.00016, P = 0.00016
Identities = 56/251 (22%), Positives = 109/251 (43%)
Query: 32 LYTGSSDNEVRSWDCNTFSSE---LDQEFLSN--NNIVAV--GKGAVKSLVVLADKLFSA 84
L+T D+ +R W N + E ++ N+IV GK + + K+++A
Sbjct: 45 LFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNA 104
Query: 85 HQDHKIRVWKINNQEPDHQKYTRLATL-PTLG-DRAIKLLMPKNHVQIRRHK----TCTW 138
H+ + + + Y + L + G DR I L + T +
Sbjct: 105 HKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSL 164
Query: 139 VHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDG- 197
+ D++ +LA+ + T++ S S ++ +++W L + H D + A+ L+ DG
Sbjct: 165 SGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKL-KGHTDNVKALLLNRDGT 223
Query: 198 DVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVW 257
+GS+D I++W S G ++ + H+ G+ AL ++ + +YSG DR I
Sbjct: 224 QCLSGSSDGTIRLW--SLGQQR--CIATYRVHDEGVWALQVNDAFTHVYSGGRDRKIYCT 279
Query: 258 EKEEDDGNILV 268
+ D +L+
Sbjct: 280 DLRNPDIRVLI 290
>ZFIN|ZDB-GENE-041114-104 [details] [associations]
symbol:tbl3 "transducin (beta)-like 3" species:7955
"Danio rerio" [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0010564 "regulation of cell
cycle process" evidence=IMP] [GO:0030098 "lymphocyte
differentiation" evidence=IMP] [GO:0048538 "thymus development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-041114-104 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048538 GO:GO:0006364 GO:GO:0032040
GO:GO:0010564 GO:GO:0030098 GeneTree:ENSGT00690000102183
EMBL:CABZ01040209 EMBL:CABZ01040210 EMBL:CABZ01079585
EMBL:CABZ01079586 IPI:IPI00489593 Ensembl:ENSDART00000074174
ArrayExpress:F1QYF0 Bgee:F1QYF0 Uniprot:F1QYF0
Length = 898
Score = 184 (69.8 bits), Expect = 9.3e-12, Sum P(2) = 9.3e-12
Identities = 62/236 (26%), Positives = 118/236 (50%)
Query: 135 TCTWVH-HVDAVSALALTKDETLLYSVSWDRTIKIWR----TSDFKCLESITNAHDDAIN 189
+C +H H D + ++ + + ++ + + D+++++WR + C+ T H +A+
Sbjct: 378 SCQILHGHTDTILSIDVFRKGSMFATCAKDKSVRVWRMDVSSGRVHCVAQGTG-HSNAVG 436
Query: 190 AVALS--DDGDVYTGSADKKIKVWR--RSPGNKKHSLVDV--LER-HNSGINALALSCDG 242
++A S V +GS D +KVW + G + ++ ER H +N++ +S +
Sbjct: 437 SIACSRMKQQFVVSGSQDCTVKVWDLPETTGAEGVMMMKARSTERAHEKDVNSVCVSPND 496
Query: 243 SVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCM--AVVSDLVCSGSADKTIRI 300
+L SG+ DR+ +W + + ++G RGH + + + + V ++ S SAD ++RI
Sbjct: 497 KLLASGSQDRTAKLWALSD----LRLLGVCRGHRRGVWSVQFSPVDQILGSASADGSVRI 552
Query: 301 WRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
W I ++++CL EGH V + S T LV SGS D +K+W I
Sbjct: 553 W-SI-QDFSCLKTFEGHDASVLKIIFV-------SRGTQ-LVSSGS-DGLVKLWTI 597
Score = 142 (55.0 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 43/177 (24%), Positives = 82/177 (46%)
Query: 128 VQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDA 187
V + + ++ H D V+++ ++ ++ LL S S DRT K+W SD + L + H
Sbjct: 471 VMMMKARSTERAHEKD-VNSVCVSPNDKLLASGSQDRTAKLWALSDLRLL-GVCRGHRRG 528
Query: 188 INAVALSD-DGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLY 246
+ +V S D + + SAD +++W + S + E H++ + + G+ L
Sbjct: 529 VWSVQFSPVDQILGSASADGSVRIW----SIQDFSCLKTFEGHDASVLKIIFVSRGTQLV 584
Query: 247 SGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCM--AVVSDLVCSGSADKTIRIW 301
S D + +W + ++ V L H + + +L+ +GSAD TI +W
Sbjct: 585 SSGSDGLVKLWTIKTNE----CVRTLDAHQDKVWALHGGCRDELMVTGSADSTITVW 637
Score = 139 (54.0 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 47/205 (22%), Positives = 88/205 (42%)
Query: 157 LYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALS-DDGDVYTGSADKKIKVWRRSP 215
L +V+ + I +++T + +DD ++ + DD + + ++KV+ S
Sbjct: 317 LITVTAEHNILLYQTPTLAVQQQFVGYNDDVLDVKFVGKDDTHIAVATNSSQLKVFELST 376
Query: 216 GNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGH 275
+ +L H I ++ + GS+ + A D+S+ VW + G + V GH
Sbjct: 377 NS-----CQILHGHTDTILSIDVFRKGSMFATCAKDKSVRVWRMDVSSGRVHCVAQGTGH 431
Query: 276 TK---SILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDR 332
+ SI C + V SGS D T+++W + ++ R + + N
Sbjct: 432 SNAVGSIACSRMKQQFVVSGSQDCTVKVWDLPETTGAEGVMMMKARSTERAHEKDV-NSV 490
Query: 333 CDSSDTSYLVCSGSLDCDIKVWQIS 357
C S + L+ SGS D K+W +S
Sbjct: 491 CVSPNDK-LLASGSQDRTAKLWALS 514
Score = 131 (51.2 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 54/195 (27%), Positives = 88/195 (45%)
Query: 153 DETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALS-DDGDVYTGSADKKIKVW 211
DE ++ ++ I I + S K + SI + I A ALS DD + + S ++ W
Sbjct: 32 DEQHIFC-TYGPKINILQISTGKIIHSIEQEDQEDITAFALSPDDEMLVSASRALLLRQW 90
Query: 212 RRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGA 271
+ S V H+ + +++ C ++L +G CD +I +W+ + + G+
Sbjct: 91 DWKQQQCRRSWRAV---HSVPVASMSFDCTSTLLATGGCDGTIKLWDVIKQYCTHNLKGS 147
Query: 272 LRGHTKSILCMAVVSDL-VCSGSADKTIRIWRGID-RNYTCLAVLEGHRGPVKCLAAAID 329
G + +S L + S S+D IRIW D R+ C+ VLE H PV LA + D
Sbjct: 148 -SGVVHLVEFHPDISRLQLFSSSSDCAIRIW---DLRSSRCVCVLESHYSPVTALAFSPD 203
Query: 330 NDRCDSSDTSYLVCS 344
SS +CS
Sbjct: 204 GHTLVSSGRDK-ICS 217
Score = 127 (49.8 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 55/236 (23%), Positives = 98/236 (41%)
Query: 131 RRHKTCTWVHHVDAVSALALTK-DETLLYSVSWDRTIKIWRTSDFKCLESIT-------- 181
R H H +AV ++A ++ + + S S D T+K+W + E +
Sbjct: 421 RVHCVAQGTGHSNAVGSIACSRMKQQFVVSGSQDCTVKVWDLPETTGAEGVMMMKARSTE 480
Query: 182 NAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCD 241
AH+ +N+V +S + + + + + L+ V H G+ ++ S
Sbjct: 481 RAHEKDVNSVCVSPNDKLLASGSQDRTA---KLWALSDLRLLGVCRGHRRGVWSVQFSPV 537
Query: 242 GSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVS---DLVCSGSADKTI 298
+L S + D S+ +W ++ + GH S+L + VS LV SGS D +
Sbjct: 538 DQILGSASADGSVRIWSIQD----FSCLKTFEGHDASVLKIIFVSRGTQLVSSGS-DGLV 592
Query: 299 RIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVW 354
++W I N C+ L+ H+ V L ++ L+ +GS D I VW
Sbjct: 593 KLWT-IKTN-ECVRTLDAHQDKVWALHGGCRDE---------LMVTGSADSTITVW 637
Score = 126 (49.4 bits), Expect = 0.00014, P = 0.00014
Identities = 52/180 (28%), Positives = 80/180 (44%)
Query: 137 TW--VHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALS 194
+W VH V V++++ TLL + D TIK+W C ++ + ++ V
Sbjct: 100 SWRAVHSVP-VASMSFDCTSTLLATGGCDGTIKLWDVIKQYCTHNLKGS-SGVVHLVEFH 157
Query: 195 DDGD---VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACD 251
D +++ S+D I++W + V VLE H S + ALA S DG L S D
Sbjct: 158 PDISRLQLFSSSSDCAIRIWDL----RSSRCVCVLESHYSPVTALAFSPDGHTLVSSGRD 213
Query: 252 RSIIVWEKEEDD--GNILVVGALRG-----HTKSILCMAVVSD---LVCSGSADKTIRIW 301
+ VW+ +E I V A+ G + M V SD LV +GS +R+W
Sbjct: 214 KICSVWDLQEQKVKRTIPVYEAVEGVVLLSGSADYSEMGVKSDALHLVTAGSKG-VLRVW 272
Score = 51 (23.0 bits), Expect = 9.3e-12, Sum P(2) = 9.3e-12
Identities = 22/87 (25%), Positives = 39/87 (44%)
Query: 18 HNSYVSSLAL--AGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAVKSLV 75
H+ V+S++ L TG D ++ WD + +++ ++N G V LV
Sbjct: 105 HSVPVASMSFDCTSTLLATGGCDGTIKLWD-------VIKQYCTHN---LKGSSGVVHLV 154
Query: 76 VL-AD----KLFSAHQDHKIRVWKINN 97
D +LFS+ D IR+W + +
Sbjct: 155 EFHPDISRLQLFSSSSDCAIRIWDLRS 181
>UNIPROTKB|Q05B17 [details] [associations]
symbol:wdr48 "WD repeat-containing protein 48" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0016579 "protein deubiquitination" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005764 GO:GO:0016579 KO:K15361 InterPro:IPR021772
Pfam:PF11816 CTD:57599 HOGENOM:HOG000007343
GeneTree:ENSGT00520000055738 OMA:NRLYSAG EMBL:BC123017
RefSeq:NP_001072858.1 UniGene:Str.41632 ProteinModelPortal:Q05B17
STRING:Q05B17 Ensembl:ENSXETT00000009249 GeneID:780319
KEGG:xtr:780319 Xenbase:XB-GENE-976371 Bgee:Q05B17 Uniprot:Q05B17
Length = 678
Score = 188 (71.2 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 61/224 (27%), Positives = 98/224 (43%)
Query: 143 DAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA--HDDAINAVALSDDGD-V 199
+ V+AL L L++ D I+IW + K I + H D +N + L +G +
Sbjct: 31 NGVNALQLDPALNRLFTAGRDSIIRIWNVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTL 90
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEK 259
+ S+D +KVW G + L H + ALA + D ++ S DR I +W+
Sbjct: 91 ISASSDTTVKVWNAHKG----FCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDV 146
Query: 260 EE-----DDGNILVVGALRGHTKSILCMAV--VSDLVCSGSADKTIRIWRGIDRNYTCLA 312
N + +L G+ SI +A+ + ++ SGS +K +R+W R L
Sbjct: 147 NTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMGTVIVSGSTEKVLRVWD--PRTCQKLM 204
Query: 313 VLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
L+GH VK L D +C SGS D I++W +
Sbjct: 205 KLKGHTDNVKALLLNRDGTQC---------LSGSSDGTIRLWSL 239
Score = 172 (65.6 bits), Expect = 7.5e-10, P = 7.5e-10
Identities = 54/201 (26%), Positives = 95/201 (47%)
Query: 130 IRRHKTCTWV----HHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHD 185
+ +HK ++ HH D V+ + L + L S S D T+K+W C+ ++ H
Sbjct: 59 VNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTL-RTHK 117
Query: 186 DAINAVALSDDGD-VYTGSADKKIKVWRRSP-----GNKKHSLVDVLERHNSGINALALS 239
D + A+A + D + V + D++I +W + + L + I +LA++
Sbjct: 118 DYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMN 177
Query: 240 CDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD-LVC-SGSADKT 297
G+V+ SG+ ++ + VW D + L+GHT ++ + + D C SGS+D T
Sbjct: 178 QMGTVIVSGSTEKVLRVW----DPRTCQKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGT 233
Query: 298 IRIWR-GIDRNYTCLAVLEGH 317
IR+W G R C+A H
Sbjct: 234 IRLWSLGQQR---CIATYRVH 251
Score = 133 (51.9 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 63/242 (26%), Positives = 99/242 (40%)
Query: 79 DKLFSAHQDHKIRVWKINNQEPD--------HQKYTRLATLPTLGDRAIKLLMPKNHVQI 130
++LF+A +D IR+W +N + D H + L G I
Sbjct: 43 NRLFTAGRDSIIRIWNVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVW 102
Query: 131 RRHKT-C--TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDA 187
HK C T H D V ALA KD+ L+ S DR I +W D L ++T A ++
Sbjct: 103 NAHKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLW---DVNTLTALT-ASNNT 158
Query: 188 INAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDV--------LERHNSGINALAL 238
+ +LS + D +Y+ + ++ V K + D L+ H + AL L
Sbjct: 159 VTTSSLSGNKDSIYSLAMNQMGTVIVSGSTEKVLRVWDPRTCQKLMKLKGHTDNVKALLL 218
Query: 239 SCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDL--VCSGSADK 296
+ DG+ SG+ D +I +W G + R H + + + V V SG D+
Sbjct: 219 NRDGTQCLSGSSDGTIRLWSL----GQQRCIATYRVHDEGVWALQVNEGFTHVYSGGRDR 274
Query: 297 TI 298
I
Sbjct: 275 KI 276
Score = 131 (51.2 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 55/219 (25%), Positives = 95/219 (43%)
Query: 12 LTTLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKG 69
+ +++ H +V+ + L GK L + SSD V+ W+ + + F + + K
Sbjct: 68 IASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAH-------KGFCMST--LRTHKD 118
Query: 70 AVKSLVVLADK--LFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLG--DRAIKLLM-- 123
VK+L DK + SA D +I +W +N + T G D L M
Sbjct: 119 YVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQ 178
Query: 124 ---------PKNHVQIRRHKTCTWVH----HVDAVSALALTKDETLLYSVSWDRTIKIWR 170
+ +++ +TC + H D V AL L +D T S S D TI++W
Sbjct: 179 MGTVIVSGSTEKVLRVWDPRTCQKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRLWS 238
Query: 171 TSDFKCLESITNAHDDAINAVALSDD-GDVYTGSADKKI 208
+C+ + HD+ + A+ +++ VY+G D+KI
Sbjct: 239 LGQQRCIATY-RVHDEGVWALQVNEGFTHVYSGGRDRKI 276
Score = 126 (49.4 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 56/251 (22%), Positives = 111/251 (44%)
Query: 32 LYTGSSDNEVRSWDCNTFSSE---LDQEFLSN--NNIVAV--GKGAVKSLVVLADKLFSA 84
L+T D+ +R W+ N + E ++ N+IV GK + + K+++A
Sbjct: 45 LFTAGRDSIIRIWNVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNA 104
Query: 85 HQDHKIRVWKINNQEPDHQKYTRLATL-PTLG-DRAIKLLMPKNHVQIRRHK----TCTW 138
H+ + + + Y + L + G DR I L + T +
Sbjct: 105 HKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSL 164
Query: 139 VHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDG- 197
+ D++ +LA+ + T++ S S ++ +++W + L + H D + A+ L+ DG
Sbjct: 165 SGNKDSIYSLAMNQMGTVIVSGSTEKVLRVWDPRTCQKLMKL-KGHTDNVKALLLNRDGT 223
Query: 198 DVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVW 257
+GS+D I++W S G ++ + H+ G+ AL ++ + +YSG DR I
Sbjct: 224 QCLSGSSDGTIRLW--SLGQQR--CIATYRVHDEGVWALQVNEGFTHVYSGGRDRKIYCT 279
Query: 258 EKEEDDGNILV 268
+ D +L+
Sbjct: 280 DLRNPDIRLLI 290
>UNIPROTKB|Q5F3K4 [details] [associations]
symbol:WDR48 "WD repeat-containing protein 48" species:9031
"Gallus gallus" [GO:0005764 "lysosome" evidence=IEA] [GO:0016579
"protein deubiquitination" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005764 GO:GO:0016579
KO:K15361 InterPro:IPR021772 Pfam:PF11816 CTD:57599
HOGENOM:HOG000007343 OrthoDB:EOG4HHP1W EMBL:AJ851646
IPI:IPI00571490 RefSeq:NP_001026135.1 UniGene:Gga.3234
ProteinModelPortal:Q5F3K4 STRING:Q5F3K4 Ensembl:ENSGALT00000031283
GeneID:420427 KEGG:gga:420427 GeneTree:ENSGT00520000055738
HOVERGEN:HBG079413 InParanoid:Q5F3K4 OMA:NRLYSAG NextBio:20823337
Uniprot:Q5F3K4
Length = 678
Score = 188 (71.2 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 61/224 (27%), Positives = 98/224 (43%)
Query: 143 DAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA--HDDAINAVALSDDGD-V 199
+ V+AL L L++ D I+IW + K I + H D +N + L +G +
Sbjct: 31 NGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTL 90
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEK 259
+ S+D +KVW G + L H + ALA + D ++ S DR I +W+
Sbjct: 91 ISASSDTTVKVWNAHKG----FCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDV 146
Query: 260 EE-----DDGNILVVGALRGHTKSILCMAV--VSDLVCSGSADKTIRIWRGIDRNYTCLA 312
N + +L G+ SI +A+ + ++ SGS +K +R+W R L
Sbjct: 147 NTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMGTVIVSGSTEKVLRVWD--PRTCAKLM 204
Query: 313 VLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
L+GH VK L D +C SGS D I++W +
Sbjct: 205 KLKGHTDNVKALLLNRDGTQC---------LSGSSDGTIRLWSL 239
Score = 173 (66.0 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 54/201 (26%), Positives = 95/201 (47%)
Query: 130 IRRHKTCTWV----HHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHD 185
+ +HK ++ HH D V+ + L + L S S D T+K+W C+ ++ H
Sbjct: 59 VNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTL-RTHK 117
Query: 186 DAINAVALSDDGD-VYTGSADKKIKVWRRSP-----GNKKHSLVDVLERHNSGINALALS 239
D + A+A + D + V + D++I +W + + L + I +LA++
Sbjct: 118 DYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMN 177
Query: 240 CDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD-LVC-SGSADKT 297
G+V+ SG+ ++ + VW D + L+GHT ++ + + D C SGS+D T
Sbjct: 178 QMGTVIVSGSTEKVLRVW----DPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGT 233
Query: 298 IRIWR-GIDRNYTCLAVLEGH 317
IR+W G R C+A H
Sbjct: 234 IRLWSLGQQR---CIATYRVH 251
Score = 132 (51.5 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 63/242 (26%), Positives = 99/242 (40%)
Query: 79 DKLFSAHQDHKIRVWKINNQEPD--------HQKYTRLATLPTLGDRAIKLLMPKNHVQI 130
++LF+A +D IR+W +N + D H + L G I
Sbjct: 43 NRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVW 102
Query: 131 RRHKT-C--TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDA 187
HK C T H D V ALA KD+ L+ S DR I +W D L ++T A ++
Sbjct: 103 NAHKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLW---DVNTLTALT-ASNNT 158
Query: 188 INAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDV--------LERHNSGINALAL 238
+ +LS + D +Y+ + ++ V K + D L+ H + AL L
Sbjct: 159 VTTSSLSGNKDSIYSLAMNQMGTVIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLL 218
Query: 239 SCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDL--VCSGSADK 296
+ DG+ SG+ D +I +W G + R H + + + V V SG D+
Sbjct: 219 NRDGTQCLSGSSDGTIRLWSL----GQQRCIATYRVHDEGVWALQVNEAFTHVYSGGRDR 274
Query: 297 TI 298
I
Sbjct: 275 KI 276
Score = 131 (51.2 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 55/219 (25%), Positives = 95/219 (43%)
Query: 12 LTTLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKG 69
+ +++ H +V+ + L GK L + SSD V+ W+ + + F + + K
Sbjct: 68 IASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAH-------KGFCMST--LRTHKD 118
Query: 70 AVKSLVVLADK--LFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLG--DRAIKLLM-- 123
VK+L DK + SA D +I +W +N + T G D L M
Sbjct: 119 YVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQ 178
Query: 124 ---------PKNHVQIRRHKTCTWVH----HVDAVSALALTKDETLLYSVSWDRTIKIWR 170
+ +++ +TC + H D V AL L +D T S S D TI++W
Sbjct: 179 MGTVIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRLWS 238
Query: 171 TSDFKCLESITNAHDDAINAVALSDD-GDVYTGSADKKI 208
+C+ + HD+ + A+ +++ VY+G D+KI
Sbjct: 239 LGQQRCIATY-RVHDEGVWALQVNEAFTHVYSGGRDRKI 276
Score = 123 (48.4 bits), Expect = 0.00020, P = 0.00020
Identities = 56/251 (22%), Positives = 109/251 (43%)
Query: 32 LYTGSSDNEVRSWDCNTFSSE---LDQEFLSN--NNIVAV--GKGAVKSLVVLADKLFSA 84
L+T D+ +R W N + E ++ N+IV GK + + K+++A
Sbjct: 45 LFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNA 104
Query: 85 HQDHKIRVWKINNQEPDHQKYTRLATL-PTLG-DRAIKLLMPKNHVQIRRHK----TCTW 138
H+ + + + Y + L + G DR I L + T +
Sbjct: 105 HKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSL 164
Query: 139 VHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDG- 197
+ D++ +LA+ + T++ S S ++ +++W L + H D + A+ L+ DG
Sbjct: 165 SGNKDSIYSLAMNQMGTVIVSGSTEKVLRVWDPRTCAKLMKL-KGHTDNVKALLLNRDGT 223
Query: 198 DVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVW 257
+GS+D I++W S G ++ + H+ G+ AL ++ + +YSG DR I
Sbjct: 224 QCLSGSSDGTIRLW--SLGQQR--CIATYRVHDEGVWALQVNEAFTHVYSGGRDRKIYCT 279
Query: 258 EKEEDDGNILV 268
+ D +L+
Sbjct: 280 DLRNPDIRVLI 290
>RGD|2321145 [details] [associations]
symbol:Fbxw7 "F-box and WD repeat domain containing 7, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030324 "lung development" evidence=ISO] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034644 "cellular response to
UV" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=ISO] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:2321145
GO:GO:0005783 GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974
GO:GO:0016567 GO:GO:0019005 GO:GO:0034644 GO:GO:0032876
GO:GO:2000060 GO:GO:0031146 GO:GO:0007062
GeneTree:ENSGT00690000101849 OrthoDB:EOG4MKNFW IPI:IPI00212282
ProteinModelPortal:D3ZQU4 Ensembl:ENSRNOT00000015279
UCSC:RGD:2321145 ArrayExpress:D3ZQU4 Uniprot:D3ZQU4
Length = 588
Score = 187 (70.9 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 57/187 (30%), Positives = 87/187 (46%)
Query: 169 WRTSDFKCLESITNAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLE 227
WR + + + HDD + L G+ + +GS D +KVW G +LV
Sbjct: 287 WRRGELRS-PKVLKGHDDHV-ITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVG--- 341
Query: 228 RHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD 287
H G+ + + +++ SG+ DR++ VW E + + L GHT ++ CM +
Sbjct: 342 -HTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGE----CIHTLYGHTSTVRCMHLHEK 394
Query: 288 LVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSL 347
V SGS D T+R+W I+ CL VL GH V+C+ D R V SG+
Sbjct: 395 RVVSGSRDATLRVW-DIETGQ-CLHVLMGHVAAVRCVQ--YDGRR---------VVSGAY 441
Query: 348 DCDIKVW 354
D +KVW
Sbjct: 442 DFMVKVW 448
Score = 185 (70.2 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 69/295 (23%), Positives = 127/295 (43%)
Query: 15 LKGHNSYV-SSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAVKS 73
LKGH+ +V + L G + +GS DN ++ W T + + + + G V S
Sbjct: 298 LKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVT--GKCLRTLVGHT-------GGVWS 348
Query: 74 LVVLADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLGDRAIKLLMPKNHVQIRRH 133
+ + + S D ++VW E H Y +T+ + +++ +R
Sbjct: 349 SQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVW 408
Query: 134 --KTCTWVH----HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDA 187
+T +H HV AV + D + S ++D +K+W CL ++ H +
Sbjct: 409 DIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTL-QGHTNR 465
Query: 188 INAVALSDDG-DVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLY 246
+ +L DG V +GS D I+VW GN H+L H S + + L ++L
Sbjct: 466 V--YSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTG----HQSLTSGMELK--DNILV 517
Query: 247 SGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIW 301
SG D ++ +W+ + + G + H ++ C+ + V + S D T+++W
Sbjct: 518 SGNADSTVKIWDIKTGQCLQTLQGPSK-HQSAVTCLQFNKNFVITSSDDGTVKLW 571
Score = 175 (66.7 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 57/187 (30%), Positives = 89/187 (47%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H V + L E + S S D T+++W +CL + H A+ V D V
Sbjct: 382 HTSTVRCMHL--HEKRVVSGSRDATLRVWDIETGQCLH-VLMGHVAAVRCVQY-DGRRVV 437
Query: 201 TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKE 260
+G+ D +KVW P + + + L+ H + + +L DG + SG+ D SI VW+ E
Sbjct: 438 SGAYDFMVKVW--DP--ETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVE 491
Query: 261 EDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEG---H 317
GN + L GH M + +++ SG+AD T++IW I + CL L+G H
Sbjct: 492 T--GNC--IHTLTGHQSLTSGMELKDNILVSGNADSTVKIW-DI-KTGQCLQTLQGPSKH 545
Query: 318 RGPVKCL 324
+ V CL
Sbjct: 546 QSAVTCL 552
Score = 144 (55.7 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 57/261 (21%), Positives = 111/261 (42%)
Query: 5 SVVDHHCLTTLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIV 64
S V CL TL GH V S + + +GS+D ++ W+ T E + +
Sbjct: 329 SAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAET--GECIHTLYGHTS-- 384
Query: 65 AVGKGAVKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTL---GDRAIKL 121
V+ + + ++ S +D +RVW I + H +A + + G R +
Sbjct: 385 -----TVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSG 439
Query: 122 LMPKNHVQIRRHKTCTWVH----HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCL 177
V++ +T T +H H + V +L D + S S D +I++W C+
Sbjct: 440 AYDFM-VKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCI 496
Query: 178 ESITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALA 237
++T H + + L D+ + +G+AD +K+W G +L +H S + L
Sbjct: 497 HTLTG-HQSLTSGMELKDN-ILVSGNADSTVKIWDIKTGQCLQTLQGP-SKHQSAVTCLQ 553
Query: 238 LSCDGSVLYSGACDRSIIVWE 258
+ + + + + D ++ +W+
Sbjct: 554 FN--KNFVITSSDDGTVKLWD 572
Score = 132 (51.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 57/222 (25%), Positives = 99/222 (44%)
Query: 11 CLTTLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGA 70
C+ TL GH S V + L K + +GS D +R WD T + + + VA A
Sbjct: 375 CIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIET--GQCLHVLMGH---VA----A 425
Query: 71 VKSLVVLADKLFSAHQDHKIRVWKINNQEPDH--QKYT-RLATLPTLGDRAIKLLMPKNH 127
V+ + ++ S D ++VW + H Q +T R+ +L G + + +
Sbjct: 426 VRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTS- 484
Query: 128 VQIRRHKTCTWVH----HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESIT-- 181
+++ +T +H H S + L KD +L S + D T+KIW +CL+++
Sbjct: 485 IRVWDVETGNCIHTLTGHQSLTSGMEL-KDN-ILVSGNADSTVKIWDIKTGQCLQTLQGP 542
Query: 182 NAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLV 223
+ H A+ + + + V T S D +K+W G +LV
Sbjct: 543 SKHQSAVTCLQFNKNF-VITSSDDGTVKLWDLKTGEFIRNLV 583
>UNIPROTKB|Q7PS24 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7165 "Anopheles gambiae"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT OrthoDB:EOG45DV4X
EMBL:AAAB01008846 RefSeq:XP_310648.3 HSSP:P63005
ProteinModelPortal:Q7PS24 STRING:Q7PS24
EnsemblMetazoa:AGAP000444-RA GeneID:1271794
KEGG:aga:AgaP_AGAP000444 VectorBase:AGAP000444 CTD:1271794
PhylomeDB:Q7PS24 Uniprot:Q7PS24
Length = 341
Score = 182 (69.1 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 65/231 (28%), Positives = 101/231 (43%)
Query: 137 TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSD---FKCLESITNAHDDAINAVAL 193
T H V + A L S D+TI++W SD + +T+ H I +A
Sbjct: 9 TLTGHAGRVWSAAWHPGGKLFASCGEDKTIRVWNKSDTDRWVAQTVLTDGHTRTIRELAW 68
Query: 194 SDDGDVYTGSA--DKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACD 251
S G Y SA D + VW + G + + LE H++ + ++ S G++L + + D
Sbjct: 69 SCCGH-YLASASFDTTVAVWDKKSGEFECNAT--LEGHDNEVKSVTWSRSGNLLATCSRD 125
Query: 252 RSIIVWE---KEEDDGNILVVGALRGHTKSI--LCMAVVSDLVCSGSADKTIRIWRG--I 304
+S+ +WE + + V L GHT+ + +C DL+ S S D TIR++R
Sbjct: 126 KSVWIWEIHHAPDQEDEYECVAVLNGHTQDVKKVCWHPQEDLLASASYDNTIRMYRQDLA 185
Query: 305 DRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQ 355
D + L LE H V ++ R S CS D +KVWQ
Sbjct: 186 DSEWEMLEPLESHSSTVWSISFDATGQRLAS-------CSE--DTTVKVWQ 227
Score = 153 (58.9 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 50/192 (26%), Positives = 84/192 (43%)
Query: 177 LESITNAHDDAINAVALSDDGDVYTGSA-DKKIKVWRRSPGNKKHSLVDVLERHNSGINA 235
L+++T H + + A G ++ DK I+VW +S ++ + + + H I
Sbjct: 7 LQTLTG-HAGRVWSAAWHPGGKLFASCGEDKTIRVWNKSDTDRWVAQTVLTDGHTRTIRE 65
Query: 236 LALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSI--LCMAVVSDLVCSGS 293
LA SC G L S + D ++ VW+K+ G L GH + + + +L+ + S
Sbjct: 66 LAWSCCGHYLASASFDTTVAVWDKKS--GEFECNATLEGHDNEVKSVTWSRSGNLLATCS 123
Query: 294 ADKTIRIWR---GIDRN--YTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLD 348
DK++ IW D+ Y C+AVL GH VK + D S+ + D
Sbjct: 124 RDKSVWIWEIHHAPDQEDEYECVAVLNGHTQDVKKVCWHPQEDLLASASYDNTIRMYRQD 183
Query: 349 CDIKVWQISFPL 360
W++ PL
Sbjct: 184 LADSEWEMLEPL 195
Score = 116 (45.9 bits), Expect = 0.00042, P = 0.00042
Identities = 41/184 (22%), Positives = 88/184 (47%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIW-------RTSDFKCLESITNAHDDAINAVAL 193
H + V ++ ++ LL + S D+++ IW + +++C+ ++ N H + V
Sbjct: 103 HDNEVKSVTWSRSGNLLATCSRDKSVWIWEIHHAPDQEDEYECV-AVLNGHTQDVKKVCW 161
Query: 194 SDDGDVY-TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDR 252
D+ + S D I+++R+ + + +++ LE H+S + +++ G L S + D
Sbjct: 162 HPQEDLLASASYDNTIRMYRQDLADSEWEMLEPLESHSSTVWSISFDATGQRLASCSEDT 221
Query: 253 SIIVWEKEEDD----------GNIL-VVGALRG-HTKSI--LCMAVVSDLVCSGSADKTI 298
++ VW++ D G I V L G H++S+ + + L+ + D T+
Sbjct: 222 TVKVWQQYGPDNALGIPCPDRGTIWKCVCTLSGYHSRSVYDIDWCKQTGLLATACGDDTV 281
Query: 299 RIWR 302
RI+R
Sbjct: 282 RIFR 285
Score = 115 (45.5 bits), Expect = 0.00055, P = 0.00055
Identities = 37/140 (26%), Positives = 59/140 (42%)
Query: 219 KHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKS 278
K L+ L H + + A G + S D++I VW K + D + GHT++
Sbjct: 3 KLELLQTLTGHAGRVWSAAWHPGGKLFASCGEDKTIRVWNKSDTDRWVAQTVLTDGHTRT 62
Query: 279 I--LCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSS 336
I L + + S S D T+ +W + C A LEGH VK + S
Sbjct: 63 IRELAWSCCGHYLASASFDTTVAVWDKKSGEFECNATLEGHDNEVKSVTW---------S 113
Query: 337 DTSYLVCSGSLDCDIKVWQI 356
+ L+ + S D + +W+I
Sbjct: 114 RSGNLLATCSRDKSVWIWEI 133
Score = 101 (40.6 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 47/202 (23%), Positives = 93/202 (46%)
Query: 173 DFKCLESITNAHDDAINAVALSDDGDVY-TGSADKKIKVWRRSPGNKKHSLVDVLERHNS 231
+++C+ ++ N H + V D+ + S D I+++R+ + + +++ LE H+S
Sbjct: 142 EYECV-AVLNGHTQDVKKVCWHPQEDLLASASYDNTIRMYRQDLADSEWEMLEPLESHSS 200
Query: 232 GINALALSCDGSVLYSGACDRSIIVWEKEEDD----------GNIL-VVGALRG-HTKSI 279
+ +++ G L S + D ++ VW++ D G I V L G H++S+
Sbjct: 201 TVWSISFDATGQRLASCSEDTTVKVWQQYGPDNALGIPCPDRGTIWKCVCTLSGYHSRSV 260
Query: 280 --LCMAVVSDLVCSGSADKTIRIWRGI---DRNYTCLAVLEGHRGPVKCLAAAIDNDRCD 334
+ + L+ + D T+RI+R DRN ++ V A + D ++
Sbjct: 261 YDIDWCKQTGLLATACGDDTVRIFREASDSDRNEPTFELV------VTVEAHSQDANKVA 314
Query: 335 SSDT-SYLVCSGSLDCDIKVWQ 355
T L+ + S D +IK+WQ
Sbjct: 315 WHPTVPGLLLTASDDGEIKLWQ 336
Score = 63 (27.2 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 23/97 (23%), Positives = 41/97 (42%)
Query: 17 GHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAVKSL 74
GH + LA + G +L + S D V WD + E + ++N V K S
Sbjct: 58 GHTRTIRELAWSCCGHYLASASFDTTVAVWDKKSGEFECNATLEGHDNEV---KSVTWSR 114
Query: 75 VVLADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATL 111
+ L + +D + +W+I++ +Y +A L
Sbjct: 115 S--GNLLATCSRDKSVWIWEIHHAPDQEDEYECVAVL 149
>UNIPROTKB|F1NC11 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0031965 "nuclear
membrane" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 OMA:SIFAHDD EMBL:AADN02037856
EMBL:AADN02037857 EMBL:AADN02037858 EMBL:AADN02037859
EMBL:AADN02037860 IPI:IPI00583802 Ensembl:ENSGALT00000023879
Uniprot:F1NC11
Length = 938
Score = 165 (63.1 bits), Expect = 7.1e-09, P = 7.1e-09
Identities = 73/304 (24%), Positives = 131/304 (43%)
Query: 14 TLKGHNSYVSSLALAGKFL--YTGSSDNEVRSWDCNTFSS--ELDQE------FLSNNNI 63
T+ GH S V +LA + + +G++++ V+ W+ +T +D E F+ +
Sbjct: 405 TIGGHRSDVRTLAFSSDNIAVLSGAAES-VKIWNRSTLQCIRTMDCEYALCSLFVPGDRQ 463
Query: 64 VAVGKGAVK-SLVVLAD-KLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLGDRAIKL 121
V VG K L LA L H VW I PD + + + +L
Sbjct: 464 VIVGTKTGKLQLYDLASGTLMETLNAHDGAVWSIA-LSPDQRGFVTGGADKCVKFWDFEL 522
Query: 122 LMPKNHVQIRRHKTCTWVHHVDA-VSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESI 180
+ ++ +Q R + +D V + + ++ LL D T+K++ T K S+
Sbjct: 523 VKDESSIQKRLSMKQVRILQLDEDVLCVRYSPNQKLLAVSLLDCTVKVFYTDTLKFFLSL 582
Query: 181 TNAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALS 239
H + + +S DG + TGSAD+ +K+W G+ SL H+ + L
Sbjct: 583 YG-HKLPVLCMDISYDGALIATGSADRNVKIWGLDFGDCHRSLF----AHDDSVMYLQFV 637
Query: 240 CDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVV--SDLVCSGSADKT 297
+ ++ D I W+ ++ + + L GH + + C+A+ D V S S DK+
Sbjct: 638 AKSHLFFTAGKDNKIKQWDADKFEH----IQTLEGHHQEVWCLALSPNGDYVVSASHDKS 693
Query: 298 IRIW 301
+R+W
Sbjct: 694 LRLW 697
Score = 144 (55.7 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 54/227 (23%), Positives = 109/227 (48%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H V LA + D + S + + ++KIW S +C+ ++ + A+ ++ + D V
Sbjct: 409 HRSDVRTLAFSSDNIAVLSGAAE-SVKIWNRSTLQCIRTMDCEY--ALCSLFVPGDRQVI 465
Query: 201 TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKE 260
G+ K++++ + G +L++ L H+ + ++ALS D +G D+ + W+ E
Sbjct: 466 VGTKTGKLQLYDLASG----TLMETLNAHDGAVWSIALSPDQRGFVTGGADKCVKFWDFE 521
Query: 261 --EDDGNI---LVVGALR--GHTKSILCMAVVSD--LVCSGSADKTIRIWRGIDRNYTCL 311
+D+ +I L + +R + +LC+ + L+ D T++++ D L
Sbjct: 522 LVKDESSIQKRLSMKQVRILQLDEDVLCVRYSPNQKLLAVSLLDCTVKVFY-TDTLKFFL 580
Query: 312 AVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQISF 358
+ L GH+ PV C+ D S L+ +GS D ++K+W + F
Sbjct: 581 S-LYGHKLPVLCM---------DISYDGALIATGSADRNVKIWGLDF 617
Score = 133 (51.9 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 36/123 (29%), Positives = 59/123 (47%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H V + ++ D L+ + S DR +KIW C S+ AHDD++ + ++
Sbjct: 585 HKLPVLCMDISYDGALIATGSADRNVKIWGLDFGDCHRSLF-AHDDSVMYLQFVAKSHLF 643
Query: 201 -TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEK 259
T D KIK W K + LE H+ + LALS +G + S + D+S+ +WE+
Sbjct: 644 FTAGKDNKIKQWDAD----KFEHIQTLEGHHQEVWCLALSPNGDYVVSASHDKSLRLWER 699
Query: 260 EED 262
+
Sbjct: 700 TRE 702
Score = 116 (45.9 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 69/335 (20%), Positives = 140/335 (41%)
Query: 38 DNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAVKSLVVLADKL-FSAHQDHKIRVWKIN 96
+N + + N S+++ Q ++ + + V++L +D + + +++W +
Sbjct: 381 NNIIELYTLN-LSAQVPQAVRASRITIGGHRSDVRTLAFSSDNIAVLSGAAESVKIWNRS 439
Query: 97 NQEPDHQ---KYTRLATLPTLGDRAIKLLMPKNHVQIRRHKTCTWVH----HVDAVSALA 149
+ +Y L +L GDR + + +Q+ + T + H AV ++A
Sbjct: 440 TLQCIRTMDCEYA-LCSLFVPGDRQVIVGTKTGKLQLYDLASGTLMETLNAHDGAVWSIA 498
Query: 150 LTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHD-DAINAVALSDDGDVYTGSADKKI 208
L+ D+ + D+ +K W K SI + + L +D S ++K+
Sbjct: 499 LSPDQRGFVTGGADKCVKFWDFELVKDESSIQKRLSMKQVRILQLDEDVLCVRYSPNQKL 558
Query: 209 KVWRRSPGNKKHSLVDVLE------RHNSGINALALSCDGSVLYSGACDRSIIVWEKEED 262
K D L+ H + + +S DG+++ +G+ DR++ +W +
Sbjct: 559 LAVSLLDCTVKVFYTDTLKFFLSLYGHKLPVLCMDISYDGALIATGSADRNVKIWGLDFG 618
Query: 263 DGNILVVGALRGHTKSILCMAVV--SDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGP 320
D + +L H S++ + V S L + D I+ W D+ + + LEGH
Sbjct: 619 DCH----RSLFAHDDSVMYLQFVAKSHLFFTAGKDNKIKQWDA-DK-FEHIQTLEGHHQE 672
Query: 321 VKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQ 355
V CLA + + D Y+V S S D +++W+
Sbjct: 673 VWCLALSPNGD--------YVV-SASHDKSLRLWE 698
Score = 94 (38.1 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 10 HCLTTLKGHNSYVSSLALAG--KFLYTGSSDNEVRSWDCNTFSSELD 54
HC TL GH + V +AL K L TG++D+E+R WD T+ EL+
Sbjct: 181 HCFKTLVGHRTEVWGMALVSEEKRLITGTADSELRVWDI-TYIQELE 226
>TAIR|locus:2092707 [details] [associations]
symbol:RACK1C_AT "AT3G18130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0048364 "root
development" evidence=IGI] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0009845 "seed germination" evidence=IGI]
[GO:0071215 "cellular response to abscisic acid stimulus"
evidence=IEP] [GO:0005829 "cytosol" evidence=RCA] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048364 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0048367 EMBL:AB020749 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AY050338 EMBL:AY101529 IPI:IPI00545680 RefSeq:NP_188441.1
UniGene:At.22741 ProteinModelPortal:Q9LV28 SMR:Q9LV28 IntAct:Q9LV28
STRING:Q9LV28 PaxDb:Q9LV28 PRIDE:Q9LV28 EnsemblPlants:AT3G18130.1
GeneID:821338 KEGG:ath:AT3G18130 GeneFarm:2980 TAIR:At3g18130
InParanoid:Q9LV28 OMA:NCKLRNS PhylomeDB:Q9LV28
Genevestigator:Q9LV28 Uniprot:Q9LV28
Length = 326
Score = 181 (68.8 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 53/186 (28%), Positives = 89/186 (47%)
Query: 177 LESITNAHDDAINAVALS-DDGDVY-TGSADKKIKVWRRSPGNKKHSLVDV-LERHNSGI 233
L+ I AH D + A+A D+ D+ T S DK I +W+ + +K + + L H+ +
Sbjct: 7 LKGIMRAHTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFV 66
Query: 234 NALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCS 291
+ LS DG SG+ D + +W+ + VG HTK +L +A +D + S
Sbjct: 67 EDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVG----HTKDVLSVAFSTDNRQIVS 122
Query: 292 GSADKTIRIWRGIDR-NYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCD 350
S D+TI++W + YT ++ +GH+ V C+ R + + S S D
Sbjct: 123 ASRDRTIKLWNTLGECKYT-ISEGDGHKEWVSCV-------RFSPNTLVPTIVSASWDKT 174
Query: 351 IKVWQI 356
+KVW +
Sbjct: 175 VKVWNL 180
Score = 165 (63.1 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 54/172 (31%), Positives = 85/172 (49%)
Query: 135 TCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESIT--NAHDDAINAVA 192
T +V H V ++A + D + S S DRTIK+W T +C +I+ + H + ++ V
Sbjct: 98 TRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLG-ECKYTISEGDGHKEWVSCVR 156
Query: 193 LSDDGDVYT---GSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGA 249
S + V T S DK +KVW ++SLV H+ +N +A+S DGS+ SG
Sbjct: 157 FSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSLVG----HSGYLNTVAVSPDGSLCASGG 212
Query: 250 CDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIW 301
D I++W+ E G L G LC + +C+ + + +IRIW
Sbjct: 213 KDGVILLWDLAE--GKKLY-SLEAGSIIHSLCFSPNRYWLCAAT-ENSIRIW 260
Score = 130 (50.8 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 51/220 (23%), Positives = 99/220 (45%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H V + L+ D S SWD +++W + + D ++ +D+ +
Sbjct: 62 HSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIV 121
Query: 201 TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSV--LYSGACDRSIIVWE 258
+ S D+ IK+W + G K+++ + + H ++ + S + V + S + D+++ VW
Sbjct: 122 SASRDRTIKLWN-TLGECKYTISEG-DGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWN 179
Query: 259 KEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIWRGIDRNYTCLAVLEG 316
+ N + +L GH+ + +AV D L SG D I +W D LA EG
Sbjct: 180 LQ----NCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLW---D-----LA--EG 225
Query: 317 HRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
+ A +I + C S + Y +C+ + + I++W +
Sbjct: 226 KK-LYSLEAGSIIHSLCFSPNR-YWLCAAT-ENSIRIWDL 262
Score = 129 (50.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 51/186 (27%), Positives = 88/186 (47%)
Query: 141 HVDAVSALALTKDETL--LYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD 198
H + VS + + + + + S SWD+T+K+W + K S+ H +N VA+S DG
Sbjct: 148 HKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSLVG-HSGYLNTVAVSPDGS 206
Query: 199 VY-TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVW 257
+ +G D I +W + G K +SL S I++L S + L + A + SI +W
Sbjct: 207 LCASGGKDGVILLWDLAEGKKLYSL-----EAGSIIHSLCFSPNRYWLCA-ATENSIRIW 260
Query: 258 EKEE----DDGNILVV--------GALRGHTKSIL-CMAV--VSD--LVCSGSADKTIRI 300
+ E +D + + G G+ K ++ C ++ +D + SG D +R+
Sbjct: 261 DLESKSVVEDLKVDLKSEAEKNEGGVGTGNQKKVIYCTSLNWSADGSTLFSGYTDGVVRV 320
Query: 301 WRGIDR 306
W GI R
Sbjct: 321 W-GIGR 325
>DICTYBASE|DDB_G0290687 [details] [associations]
symbol:mhkC "myosin heavy chain kinase C"
species:44689 "Dictyostelium discoideum" [GO:0031037 "myosin II
filament disassembly" evidence=IMP] [GO:0005826 "actomyosin
contractile ring" evidence=IDA] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0016905 "myosin heavy chain kinase activity"
evidence=IEA;IMP] [GO:0006468 "protein phosphorylation"
evidence=IEA;ISS] [GO:0005938 "cell cortex" evidence=IEA;IDA]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA;ISS;IDA] [GO:0018107 "peptidyl-threonine
phosphorylation" evidence=IDA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA;IC] [GO:0045159 "myosin II
binding" evidence=ISS] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0032154 "cleavage furrow"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR004166 InterPro:IPR011009 InterPro:IPR015943
Pfam:PF00400 Pfam:PF02816 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS51158 SMART:SM00320 SMART:SM00811 dictyBase:DDB_G0290687
GO:GO:0005524 GO:GO:0016020 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GenomeReviews:CM000154_GR
GO:GO:0000910 GO:GO:0005826 GO:GO:0018107 GO:GO:0032154 HSSP:P16649
BRENDA:2.7.11.7 EMBL:AAFI02000166 GO:GO:0031037 GO:GO:0045159
GO:GO:0016905 ProtClustDB:CLSZ2846619 EMBL:AB079663 EMBL:AF079447
RefSeq:XP_635600.1 ProteinModelPortal:Q8MY12
EnsemblProtists:DDB0216199 GeneID:8627781 KEGG:ddi:DDB_G0290687
OMA:NTRSSIL Uniprot:Q8MY12
Length = 780
Score = 188 (71.2 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 64/225 (28%), Positives = 108/225 (48%)
Query: 137 TWVHHVDAVSAL---ALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVAL 193
T + ++D V L +T D LYS S D I +W + K + +I AH +I AV
Sbjct: 501 TSIKNIDTVRGLQSECITGDSLRLYSGSNDGQIGVWDAVELKHVTNI-KAHGKSIRAVIK 559
Query: 194 SD--DGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACD 251
D ++ T AD +K W N + ++ ++ E + +N + + ++LY+G D
Sbjct: 560 RPGFDQNILTAGADSLVKEWDI---NTQQTIKEIKESNE--VNTIFIQ--DNLLYTGCND 612
Query: 252 RSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCL 311
+++ VW+ + V L GHT++I + + +L+ SGS D+ I +W T L
Sbjct: 613 KTVKVWDMRSYE----CVKTLSGHTRAIKSVCAMGNLLFSGSNDQQIYVWNLATG--TIL 666
Query: 312 AVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
+GH G VK L A N+ ++ SGS D I++W +
Sbjct: 667 TNFQGHEGWVKTLYA--HNN---------MLYSGSHDETIRIWDL 700
Score = 133 (51.9 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 55/221 (24%), Positives = 108/221 (48%)
Query: 51 SELDQ-EFLSNNNIVAVGKGAVKSLVVLAD--KLFSAHQDHKIRVWK------INNQEPD 101
SE ++ + S NI V +G ++S + D +L+S D +I VW + N +
Sbjct: 493 SEFEKWDLTSIKNIDTV-RG-LQSECITGDSLRLYSGSNDGQIGVWDAVELKHVTNIKA- 549
Query: 102 HQKYTRLATLPTLG-DRAIKLLMPKNHVQ---IRRHKTCTWVHHVDAVSALALTKDETLL 157
H K R A + G D+ I + V+ I +T + + V+ + + + LL
Sbjct: 550 HGKSIR-AVIKRPGFDQNILTAGADSLVKEWDINTQQTIKEIKESNEVNTIFI--QDNLL 606
Query: 158 YSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGN 217
Y+ D+T+K+W ++C+++++ H AI +V + +++GS D++I VW + G
Sbjct: 607 YTGCNDKTVKVWDMRSYECVKTLSG-HTRAIKSVCAMGNL-LFSGSNDQQIYVWNLATG- 663
Query: 218 KKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWE 258
+++ + H + L ++LYSG+ D +I +W+
Sbjct: 664 ---TILTNFQGHEGWVKTLY--AHNNMLYSGSHDETIRIWD 699
>UNIPROTKB|G4MUR7 [details] [associations]
symbol:MGG_08829 "Transcriptional repressor rco-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
KO:K06666 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
RefSeq:XP_003713847.1 ProteinModelPortal:G4MUR7 SMR:G4MUR7
EnsemblFungi:MGG_08829T0 GeneID:2679815 KEGG:mgr:MGG_08829
Uniprot:G4MUR7
Length = 607
Score = 186 (70.5 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 61/225 (27%), Positives = 102/225 (45%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD-V 199
H + +L +D + S S DRT+++W + L T +D + VA+S D V
Sbjct: 387 HEQDIYSLDFARDGRTIASGSGDRTVRLWDIENGTALTVFTI--EDGVTTVAISPDTKYV 444
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEK 259
GS DK ++VW + G L + + H + ++A S +G L +G+ D++I +WE
Sbjct: 445 AAGSLDKSVRVWDLTQGCPVERL-EGPDGHKDSVYSVAFSPNGRDLVTGSLDKTIKLWEL 503
Query: 260 EEDDGNILVVGA--------LRGHTKSILCMAVVSD--LVCSGSADKTIRIWRGIDRNYT 309
GN+ G+ GH +L +A+ D V SGS D+ ++ W R +
Sbjct: 504 ATPRGNMQNQGSKGGRCVKTFEGHRDFVLSVALTPDNQWVMSGSKDRGVQFWD--PRTGS 561
Query: 310 CLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVW 354
+L+GH+ V +A S T +GS D ++W
Sbjct: 562 TQLMLQGHKNSVISVAP---------SPTGGFFATGSGDMRARIW 597
Score = 154 (59.3 bits), Expect = 6.5e-08, P = 6.5e-08
Identities = 64/231 (27%), Positives = 110/231 (47%)
Query: 139 VHHVDAVSALALTKDETLLYSVSWDRTIKIW--RTSDFKCLESITNAH---DDAINAVAL 193
+ H V + + D + + +R+ +I+ T + C+ NA D I +V
Sbjct: 296 LQHESVVCCVRFSADGKYV-ATGCNRSAQIFDVNTGEKVCVLQDDNADTTGDLYIRSVCF 354
Query: 194 SDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDR 252
S DG + TG+ DK+I+VW + + H I +L + DG + SG+ DR
Sbjct: 355 SPDGKYLATGAEDKQIRVWDITTRTIRIQFAG----HEQDIYSLDFARDGRTIASGSGDR 410
Query: 253 SIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTC-L 311
++ +W+ E +G L V + ++ ++ + V +GS DK++R+W D C +
Sbjct: 411 TVRLWDIE--NGTALTVFTIEDGVTTV-AISPDTKYVAAGSLDKSVRVW---DLTQGCPV 464
Query: 312 AVLEG---HRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQISFP 359
LEG H+ V +A + N R D LV +GSLD IK+W+++ P
Sbjct: 465 ERLEGPDGHKDSVYSVAFS-PNGR-D------LV-TGSLDKTIKLWELATP 506
Score = 137 (53.3 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 53/182 (29%), Positives = 79/182 (43%)
Query: 181 TNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSG---INALA 237
T H+ + V S DG ++ +++ + G K L D +G I ++
Sbjct: 295 TLQHESVVCCVRFSADGKYVATGCNRSAQIFDVNTGEKVCVLQDD-NADTTGDLYIRSVC 353
Query: 238 LSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSAD 295
S DG L +GA D+ I VW+ I GH + I + D + SGS D
Sbjct: 354 FSPDGKYLATGAEDKQIRVWDITTRTIRI----QFAGHEQDIYSLDFARDGRTIASGSGD 409
Query: 296 KTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQ 355
+T+R+W I+ N T L V G AI S DT Y V +GSLD ++VW
Sbjct: 410 RTVRLW-DIE-NGTALTVFTIEDGVT---TVAI------SPDTKY-VAAGSLDKSVRVWD 457
Query: 356 IS 357
++
Sbjct: 458 LT 459
Score = 123 (48.4 bits), Expect = 0.00018, P = 0.00018
Identities = 61/275 (22%), Positives = 116/275 (42%)
Query: 21 YVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAVKSLVVLA 78
Y+ S+ + GK+L TG+ D ++R WD T + + +F + + SL
Sbjct: 348 YIRSVCFSPDGKYLATGAEDKQIRVWDITTRTIRI--QFAGHEQ-------DIYSLDFAR 398
Query: 79 D--KLFSAHQDHKIRVWKINNQEP-----DHQKYTRLATLP-----TLG--DRAIKLLMP 124
D + S D +R+W I N T +A P G D+++++
Sbjct: 399 DGRTIASGSGDRTVRLWDIENGTALTVFTIEDGVTTVAISPDTKYVAAGSLDKSVRVWDL 458
Query: 125 KNHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWR------------TS 172
+ R + H D+V ++A + + L + S D+TIK+W +
Sbjct: 459 TQGCPVERLEGPDG--HKDSVYSVAFSPNGRDLVTGSLDKTIKLWELATPRGNMQNQGSK 516
Query: 173 DFKCLESITNAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNS 231
+C+++ H D + +VAL+ D V +GS D+ ++ W G+ + +L+ H +
Sbjct: 517 GGRCVKTF-EGHRDFVLSVALTPDNQWVMSGSKDRGVQFWDPRTGSTQL----MLQGHKN 571
Query: 232 GINALALSCDGSVLYSGACDRSIIVWEKEEDDGNI 266
+ ++A S G +G+ D +W D +
Sbjct: 572 SVISVAPSPTGGFFATGSGDMRARIWSYTRMDNRM 606
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 186 (70.5 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 87/324 (26%), Positives = 147/324 (45%)
Query: 56 EFLSNNNIVAVGKGAVKSL--VVLADKLFSAHQDHKIRVWKINNQEPDHQKYTR-LATLP 112
+F +N +A G ++ V KLF+ H++ + +P Y R +A P
Sbjct: 320 KFSNNGKYLATGCNQAANVFDVQTGKKLFTLHEE---------SPDPSRDLYVRTIAFSP 370
Query: 113 -----TLG--DRAIKLLMPKNHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRT 165
G DR IKL + ++R + H + +L + + + S S DRT
Sbjct: 371 DGKYLVTGTEDRQIKL-WDLSTQKVRY----VFSGHEQDIYSLDFSHNGRFIVSGSGDRT 425
Query: 166 IKIWRTSDFKCLESITNAHDDAINAVALS-DDGDVYTGSADKKIKVWRRSPGNKKHSLVD 224
++W +C+ + ++ + A+A+S +D + GS D+ I+VW S G +LV+
Sbjct: 426 ARLWDVETGQCILKLEI--ENGVTAIAISPNDQFIAVGSLDQIIRVWSVS-G----TLVE 478
Query: 225 VLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDG-NILVV---GALR----GHT 276
LE H + ++A S D S+L SG+ D++I VWE + + + G + GHT
Sbjct: 479 RLEGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHT 538
Query: 277 KSILCMAVVSDLV--CSGSADKTIRIWR-GIDRNY-TCLAVLEGHRGPVKCLAAAIDNDR 332
+L +AV D SGS D++++ W ++Y TC +GH+ V +
Sbjct: 539 DFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTC----QGHKNSVISV-------- 586
Query: 333 CDSSDTSYLVCSGSLDCDIKVWQI 356
C S D SGS D ++W I
Sbjct: 587 CFSPDGRQFA-SGSGDLRARIWSI 609
Score = 126 (49.4 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 59/223 (26%), Positives = 100/223 (44%)
Query: 17 GHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKG----A 70
GH + SL + G+F+ +GS D R WD T L E + +A+ A
Sbjct: 400 GHEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETGQCILKLEIENGVTAIAISPNDQFIA 459
Query: 71 VKSL--VV----LADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLGDRAIKL--L 122
V SL ++ ++ L + HK V+ I PD + + +L D+ IK+ L
Sbjct: 460 VGSLDQIIRVWSVSGTLVERLEGHKESVYSIAFS-PD----SSILLSGSL-DKTIKVWEL 513
Query: 123 MPKNHV---QIRRHKTC--TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCL 177
V I+ C T+ H D V ++A++ D S S DR+++ W D +
Sbjct: 514 QATRSVGLSAIKPEGICKATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFW---DLQTG 570
Query: 178 ES-IT-NAHDDAINAVALSDDGDVY-TGSADKKIKVWRRSPGN 217
+S +T H +++ +V S DG + +GS D + ++W P +
Sbjct: 571 QSYLTCQGHKNSVISVCFSPDGRQFASGSGDLRARIWSIDPAS 613
Score = 117 (46.2 bits), Expect = 0.00082, P = 0.00082
Identities = 48/185 (25%), Positives = 77/185 (41%)
Query: 181 TNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSG--INALAL 238
T H + V S++G ++ V+ G K +L + + + +A
Sbjct: 309 TLEHPSVVCCVKFSNNGKYLATGCNQAANVFDVQTGKKLFTLHEESPDPSRDLYVRTIAF 368
Query: 239 SCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADK 296
S DG L +G DR I +W+ V GH + I + + + SGS D+
Sbjct: 369 SPDGKYLVTGTEDRQIKLWDLSTQK----VRYVFSGHEQDIYSLDFSHNGRFIVSGSGDR 424
Query: 297 TIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
T R+W ++ C+ LE G V +A + ND+ + GSLD I+VW +
Sbjct: 425 TARLW-DVETGQ-CILKLEIENG-VTAIAIS-PNDQ--------FIAVGSLDQIIRVWSV 472
Query: 357 SFPLV 361
S LV
Sbjct: 473 SGTLV 477
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 185 (70.2 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 48/172 (27%), Positives = 91/172 (52%)
Query: 143 DAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITN--AHDDAINAVALSDDG-DV 199
D V+ +A++ D + + S D+T+++W T+ +E + N H D++ +VA + +G ++
Sbjct: 400 DGVTTVAMSPDGLYVAAGSLDKTVRVWDTTTGYLVERLENPDGHKDSVYSVAFAPNGKEL 459
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVD-------VLERHNSGINALALSCDGSVLYSGACDR 252
+GS DK IK+W + ++++ E H + ++ L+ DG + SG+ DR
Sbjct: 460 VSGSLDKTIKLWELNLPRQQYNSAGKGGKCHRTFEGHKDFVLSVCLTPDGHWVMSGSKDR 519
Query: 253 SIIVWEKEEDDGNILVVGALRGHTKSILCMAV--VSDLVCSGSADKTIRIWR 302
+ W+ GN ++ L+GH S++ +A +L +GS D RIWR
Sbjct: 520 GVQFWDPIT--GNAQMM--LQGHKNSVISVAPSPTGNLFATGSGDMRARIWR 567
Score = 166 (63.5 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 54/185 (29%), Positives = 91/185 (49%)
Query: 178 ESITNAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINAL 236
ES+ + D I +V S DG + TG+ DK+I+VW + KH + H I +L
Sbjct: 309 ESVDKSGDLYIRSVCFSPDGKYLATGAEDKQIRVWDIATRTIKH----IFSGHEQDIYSL 364
Query: 237 ALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADK 296
+ +G + SG+ D+++ +W+ E G ++ ++ ++ M+ V +GS DK
Sbjct: 365 DFAGNGRYIASGSGDKTVRLWDIAE--GKLVYTLSIEDGVTTV-AMSPDGLYVAAGSLDK 421
Query: 297 TIRIWRGIDRNYTC--LAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVW 354
T+R+W Y L +GH+ V +A A + LV SGSLD IK+W
Sbjct: 422 TVRVW-DTTTGYLVERLENPDGHKDSVYSVAFAPNGKE--------LV-SGSLDKTIKLW 471
Query: 355 QISFP 359
+++ P
Sbjct: 472 ELNLP 476
Score = 152 (58.6 bits), Expect = 9.8e-08, P = 9.8e-08
Identities = 56/224 (25%), Positives = 109/224 (48%)
Query: 145 VSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD-VYTGS 203
+ ++ + D L + + D+ I++W + + ++ I + H+ I ++ + +G + +GS
Sbjct: 319 IRSVCFSPDGKYLATGAEDKQIRVWDIAT-RTIKHIFSGHEQDIYSLDFAGNGRYIASGS 377
Query: 204 ADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDD 263
DK +++W + G ++L +E G+ +A+S DG + +G+ D+++ VW+
Sbjct: 378 GDKTVRLWDIAEGKLVYTLS--IE---DGVTTVAMSPDGLYVAAGSLDKTVRVWDTTT-- 430
Query: 264 GNILV-VGALRGHTKSILCMAVV---SDLVCSGSADKTIRIWR-GIDRN-YT-------C 310
G ++ + GH S+ +A +LV SGS DKTI++W + R Y C
Sbjct: 431 GYLVERLENPDGHKDSVYSVAFAPNGKELV-SGSLDKTIKLWELNLPRQQYNSAGKGGKC 489
Query: 311 LAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVW 354
EGH+ V L+ + D + V SGS D ++ W
Sbjct: 490 HRTFEGHKDFV--LSVCLTPD-------GHWVMSGSKDRGVQFW 524
Score = 142 (55.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 66/269 (24%), Positives = 119/269 (44%)
Query: 16 KGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNT------FSS-ELD---QEFLSNNNI 63
K + Y+ S+ + GK+L TG+ D ++R WD T FS E D +F N
Sbjct: 313 KSGDLYIRSVCFSPDGKYLATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNGRY 372
Query: 64 VAVGKG--AVKSLVVLADKL-FSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLGDRAIK 120
+A G G V+ + KL ++ + + ++ PD Y +L D+ ++
Sbjct: 373 IASGSGDKTVRLWDIAEGKLVYTLSIEDGVTTVAMS---PDGL-YVAAGSL----DKTVR 424
Query: 121 LLMPKNHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTS----DF-- 174
+ + R + H D+V ++A + L S S D+TIK+W + +
Sbjct: 425 VWDTTTGYLVERLENPDG--HKDSVYSVAFAPNGKELVSGSLDKTIKLWELNLPRQQYNS 482
Query: 175 -----KCLESITNAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLER 228
KC + H D + +V L+ DG V +GS D+ ++ W GN + +L+
Sbjct: 483 AGKGGKCHRTF-EGHKDFVLSVCLTPDGHWVMSGSKDRGVQFWDPITGNAQM----MLQG 537
Query: 229 HNSGINALALSCDGSVLYSGACDRSIIVW 257
H + + ++A S G++ +G+ D +W
Sbjct: 538 HKNSVISVAPSPTGNLFATGSGDMRARIW 566
Score = 118 (46.6 bits), Expect = 0.00058, P = 0.00058
Identities = 51/194 (26%), Positives = 84/194 (43%)
Query: 167 KIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVD-- 224
++ R D + + + HD + V S DG ++ +++ + G L D
Sbjct: 253 EVQRVLDVELVHHLV--HDSVVCCVRFSRDGKYLATGCNRSAQIFDVTLGQNVAVLQDES 310
Query: 225 VLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAV 284
V + + I ++ S DG L +GA D+ I VW D + GH + I +
Sbjct: 311 VDKSGDLYIRSVCFSPDGKYLATGAEDKQIRVW----DIATRTIKHIFSGHEQDIYSLDF 366
Query: 285 VSD--LVCSGSADKTIRIWRGIDRN--YTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSY 340
+ + SGS DKT+R+W + YT L++ +G V +A S D Y
Sbjct: 367 AGNGRYIASGSGDKTVRLWDIAEGKLVYT-LSIEDG----VTTVAM--------SPDGLY 413
Query: 341 LVCSGSLDCDIKVW 354
V +GSLD ++VW
Sbjct: 414 -VAAGSLDKTVRVW 426
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 188 (71.2 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 48/149 (32%), Positives = 83/149 (55%)
Query: 156 LLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY-TGSADKKIKVWRRS 214
+L S S D T+++W + L+ H + +VA S DG + +GS DK +++W +
Sbjct: 709 VLASGSDDETVRLWDPATGS-LQQTLEGHSGWVLSVAFSPDGRLLASGSFDKTVRLWDPA 767
Query: 215 PGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRG 274
G SL L H++ + ++A S DG +L SG+ D+++ +W+ G++ LRG
Sbjct: 768 TG----SLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDPAT--GSLQQT--LRG 819
Query: 275 HTKSILCMAVVSD--LVCSGSADKTIRIW 301
H+ ++ +A D L+ SGS DKT+R+W
Sbjct: 820 HSDTVRSVAFSPDGRLLASGSFDKTVRLW 848
Score = 161 (61.7 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 37/119 (31%), Positives = 67/119 (56%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H V ++A + D LL S S+D+T+++W + L+ H + + +VA S DG +
Sbjct: 736 HSGWVLSVAFSPDGRLLASGSFDKTVRLWDPATGS-LQQTLRGHSNWVRSVAFSPDGRLL 794
Query: 201 -TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWE 258
+GS DK +++W + G SL L H+ + ++A S DG +L SG+ D+++ +W+
Sbjct: 795 ASGSFDKTVRLWDPATG----SLQQTLRGHSDTVRSVAFSPDGRLLASGSFDKTVRLWD 849
Score = 160 (61.4 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 47/156 (30%), Positives = 80/156 (51%)
Query: 201 TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKE 260
+GS D+ +++W + G SL LE H+ + ++A S DG +L SG+ D+++ +W+
Sbjct: 712 SGSDDETVRLWDPATG----SLQQTLEGHSGWVLSVAFSPDGRLLASGSFDKTVRLWDPA 767
Query: 261 EDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIWRGIDRNYTCLAVLEGHR 318
G++ LRGH+ + +A D L+ SGS DKT+R+W + L GH
Sbjct: 768 T--GSLQQT--LRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDPATGSLQ--QTLRGHS 821
Query: 319 GPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVW 354
V+ +A + D L+ SGS D +++W
Sbjct: 822 DTVRSVAFSPDGR---------LLASGSFDKTVRLW 848
Score = 124 (48.7 bits), Expect = 0.00024, P = 0.00024
Identities = 31/106 (29%), Positives = 55/106 (51%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H + V ++A + D LL S S+D+T+++W + L+ H D + +VA S DG +
Sbjct: 778 HSNWVRSVAFSPDGRLLASGSFDKTVRLWDPATGS-LQQTLRGHSDTVRSVAFSPDGRLL 836
Query: 201 -TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVL 245
+GS DK +++W + G + +L+ + L S DGS +
Sbjct: 837 ASGSFDKTVRLWDPATGTLQQTLII-----KGTVTELQFSQDGSYI 877
>POMBASE|SPCC126.01c [details] [associations]
symbol:SPCC126.01c "conserved fungal protein"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPCC126.01c GO:GO:0005829 GO:GO:0005634
GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 PIR:T40905 RefSeq:NP_588444.2
ProteinModelPortal:O94394 EnsemblFungi:SPCC126.01c.1 GeneID:2538691
KEGG:spo:SPCC126.01c OMA:WTASADK OrthoDB:EOG4BK8CJ NextBio:20799877
Uniprot:O94394
Length = 369
Score = 181 (68.8 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 51/179 (28%), Positives = 88/179 (49%)
Query: 133 HKTC-TWVHHVDAVSAL---ALTKDETL--LYSVSWDRTIKIWRTSDFKCLESITNAHDD 186
+KTC T+ H V+ +L KD + +Y+ SWD TIK W S +C+E++ H D
Sbjct: 75 NKTCKTYKGHSGPVTCCQIESLRKDGKVRHIYTGSWDHTIKKWNVSTGECVETLIG-HTD 133
Query: 187 AINAVAL-SDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVL 245
+ + L ++G + +GS D + VW S ++ L+ L H+ GI + + +
Sbjct: 134 YVKCLLLLEEEGLLLSGSTDASLIVWDVS--SQPSRLLYKLTGHSRGIECITRQPNTDIF 191
Query: 246 YSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVV---SDLVCSGSADKTIRIW 301
++ + SI W + G+ L GH ++ C+ S+ + + SADKT+R W
Sbjct: 192 WTCGSESSIRCWHITKVGGSQLEEEGFWGHQSNVYCLLFDPQDSEALWTASADKTVREW 250
Score = 143 (55.4 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 69/277 (24%), Positives = 118/277 (42%)
Query: 14 TLKGHNSYVS-----SLALAGKF--LYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAV 66
T KGH+ V+ SL GK +YTGS D+ ++ W+ +T E + + + + V
Sbjct: 80 TYKGHSGPVTCCQIESLRKDGKVRHIYTGSWDHTIKKWNVST--GECVETLIGHTDYV-- 135
Query: 67 GKGAVKSLVVLADK--LFSAHQDHKIRVWKINNQEP-------DHQKYTRLATL-P---- 112
K L++L ++ L S D + VW +++Q H + T P
Sbjct: 136 -----KCLLLLEEEGLLLSGSTDASLIVWDVSSQPSRLLYKLTGHSRGIECITRQPNTDI 190
Query: 113 --TLG-DRAIKLLMPKNHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIW 169
T G + +I+ + + W H + L +D L++ S D+T++ W
Sbjct: 191 FWTCGSESSIRCWHITKVGGSQLEEEGFWGHQSNVYCLLFDPQDSEALWTASADKTVREW 250
Query: 170 RTSDFKCLESITNA-HDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLER 228
S ++ + T H D V DG++ T D++I+VW + GN K D+
Sbjct: 251 --SLYQGIHEETRMEHPDVCTDVLTLADGNIATACRDEEIRVWDTTTGNVK----DIYSG 304
Query: 229 HNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGN 265
H + + L S L S + D++I VW+ E N
Sbjct: 305 HYESVTKI-LQWK-SYLISSSLDQTIRVWDLEYSADN 339
>UNIPROTKB|P16520 [details] [associations]
symbol:GNB3 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-3" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0043005
"neuron projection" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IPI]
[GO:0003924 "GTPase activity" evidence=TAS] [GO:0008217 "regulation
of blood pressure" evidence=TAS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=TAS] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0006112 "energy reserve metabolic
process" evidence=TAS] [GO:0007268 "synaptic transmission"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0071377 "cellular response to glucagon stimulus"
evidence=TAS] [GO:0006184 "GTP catabolic process" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
Reactome:REACT_111102 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007268 GO:GO:0003924
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0006112 GO:GO:0004871 GO:GO:0008217 GO:GO:0071377
Pathway_Interaction_DB:cone_pathway EMBL:U47924 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 HPA:HPA040736 CTD:2784 KO:K07825 EMBL:M31328
EMBL:U47930 EMBL:Y12050 EMBL:Y12051 EMBL:Y12052 EMBL:Y12053
EMBL:Y12054 EMBL:Y12055 EMBL:Y12056 EMBL:Y12057 EMBL:Y12058
EMBL:AF501884 EMBL:BT009800 EMBL:AY631872 EMBL:BC000115
EMBL:BC002454 IPI:IPI00029143 PIR:A35096 RefSeq:NP_002066.1
UniGene:Hs.631657 ProteinModelPortal:P16520 SMR:P16520 DIP:DIP-601N
IntAct:P16520 STRING:P16520 PhosphoSite:P16520 DMDM:121011
OGP:P16520 PaxDb:P16520 PRIDE:P16520 DNASU:2784
Ensembl:ENST00000229264 GeneID:2784 KEGG:hsa:2784 UCSC:uc001qrc.3
GeneCards:GC12P007021 HGNC:HGNC:4400 HPA:HPA005645 MIM:139130
neXtProt:NX_P16520 PharmGKB:PA176 InParanoid:P16520 OMA:NMCSIYS
OrthoDB:EOG4J118C PhylomeDB:P16520 ChiTaRS:GNB3 GenomeRNAi:2784
NextBio:10967 ArrayExpress:P16520 Bgee:P16520 CleanEx:HS_GNB3
Genevestigator:P16520 GermOnline:ENSG00000111664 Uniprot:P16520
Length = 340
Score = 180 (68.4 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 75/305 (24%), Positives = 134/305 (43%)
Query: 14 TLKGHNS--YVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAV 71
TL+GH + Y A K L + S D ++ WD T ++++ L ++ ++
Sbjct: 50 TLRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDSYT-TNKVHAIPLRSSWVMTCAYAPS 108
Query: 72 KSLVVLA--DKLFSAHQDHKIRVW--KINNQEPDHQKYTRLATLPTLGDRAIKLLMPKN- 126
+ V D + S + + K R K++ + H Y L+ L D I
Sbjct: 109 GNFVACGGLDNMCSIY-NLKSREGNVKVSRELSAHTGY--LSCCRFLDDNNIVTSSGDTT 165
Query: 127 ----HVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITN 182
++ + KT +V H +LA++ D L S + D + K+W + C ++ T
Sbjct: 166 CALWDIETGQQKT-VFVGHTGDCMSLAVSPDFNLFISGACDASAKLWDVREGTCRQTFTG 224
Query: 183 AHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNS---GINALAL 238
H+ INA+ +G+ + TGS D +++ + + H S GI ++A
Sbjct: 225 -HESDINAICFFPNGEAICTGSDDASCRLFDLRADQEL-----ICFSHESIICGITSVAF 278
Query: 239 SCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADK 296
S G +L++G D + VW+ + + VG L GH + C+ V +D V +GS D
Sbjct: 279 SLSGRLLFAGYDDFNCNVWDSMKSER----VGILSGHDNRVSCLGVTADGMAVATGSWDS 334
Query: 297 TIRIW 301
++IW
Sbjct: 335 FLKIW 339
Score = 124 (48.7 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 36/134 (26%), Positives = 58/134 (43%)
Query: 182 NAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCD 241
+AH ++ DD ++ T S D +W G +K V H +LA+S D
Sbjct: 140 SAHTGYLSCCRFLDDNNIVTSSGDTTCALWDIETGQQKTVFVG----HTGDCMSLAVSPD 195
Query: 242 GSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSI--LCMAVVSDLVCSGSADKTIR 299
++ SGACD S +W+ E G GH I +C + +C+GS D + R
Sbjct: 196 FNLFISGACDASAKLWDVRE--GTCRQT--FTGHESDINAICFFPNGEAICTGSDDASCR 251
Query: 300 IWR-GIDRNYTCLA 312
++ D+ C +
Sbjct: 252 LFDLRADQELICFS 265
Score = 120 (47.3 bits), Expect = 0.00015, P = 0.00015
Identities = 40/164 (24%), Positives = 70/164 (42%)
Query: 194 SDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRS 253
+D + + S D K+ VW NK H++ +S + A + G+ + G D
Sbjct: 65 TDSKLLVSASQDGKLIVWDSYTTNKVHAI----PLRSSWVMTCAYAPSGNFVACGGLDNM 120
Query: 254 IIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDL-VCSGSADKTIRIWRGIDRNYTCLA 312
++ + +GN+ V L HT + C + D + + S D T +W I+
Sbjct: 121 CSIYNLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSGDTTCALW-DIETGQQ-KT 178
Query: 313 VLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
V GH G C++ A+ S D + + SG+ D K+W +
Sbjct: 179 VFVGHTGD--CMSLAV------SPDFNLFI-SGACDASAKLWDV 213
Score = 118 (46.6 bits), Expect = 0.00025, P = 0.00025
Identities = 50/216 (23%), Positives = 85/216 (39%)
Query: 128 VQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDA 187
VQ+R +T H+ + A+ D LL S S D + +W + + +I
Sbjct: 43 VQMRTRRTLRG--HLAKIYAMHWATDSKLLVSASQDGKLIVWDSYTTNKVHAIP-LRSSW 99
Query: 188 INAVALSDDGD-VYTGSADKKIKVW--RRSPGNKKHSLVDVLERHNSGINALALSCDGSV 244
+ A + G+ V G D ++ + GN K S L H ++ D ++
Sbjct: 100 VMTCAYAPSGNFVACGGLDNMCSIYNLKSREGNVKVSRE--LSAHTGYLSCCRFLDDNNI 157
Query: 245 LYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIWR 302
+ S D + +W+ E + VG HT + +AV D L SG+ D + ++W
Sbjct: 158 VTSSG-DTTCALWDIETGQQKTVFVG----HTGDCMSLAVSPDFNLFISGACDASAKLWD 212
Query: 303 GIDRNYTCLAVLEGHRGPVKCLAAAIDNDR-CDSSD 337
R TC GH + + + + C SD
Sbjct: 213 V--REGTCRQTFTGHESDINAICFFPNGEAICTGSD 246
Score = 115 (45.5 bits), Expect = 0.00055, P = 0.00055
Identities = 47/217 (21%), Positives = 87/217 (40%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H +S D ++ S S D T +W + +++ H ++A+S D +++
Sbjct: 142 HTGYLSCCRFLDDNNIVTS-SGDTTCALWDIETGQ-QKTVFVGHTGDCMSLAVSPDFNLF 199
Query: 201 -TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEK 259
+G+ D K+W G + + H S INA+ +G + +G+ D S +++
Sbjct: 200 ISGACDASAKLWDVREGTCRQTFTG----HESDINAICFFPNGEAICTGSDDASCRLFDL 255
Query: 260 EEDDGNILVV--GALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGH 317
D I + G T + ++ L+ +G D +W + + +L GH
Sbjct: 256 RADQELICFSHESIICGITS--VAFSLSGRLLFAGYDDFNCNVWDSMKSER--VGILSGH 311
Query: 318 RGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVW 354
V CL D V +GS D +K+W
Sbjct: 312 DNRVSCLGVTADG---------MAVATGSWDSFLKIW 339
>UNIPROTKB|F1SLU8 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 OMA:NMCSIYS EMBL:FP325257
Ensembl:ENSSSCT00000000743 Uniprot:F1SLU8
Length = 340
Score = 180 (68.4 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 74/304 (24%), Positives = 135/304 (44%)
Query: 14 TLKGHNS--YVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAV 71
TL+GH + Y A K L + S D ++ WD T ++++ L ++ ++
Sbjct: 50 TLRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYT-TNKVHAIPLRSSWVMTCAYAPS 108
Query: 72 KSLVVLA--DKLFSAH--QDHKIRVWKINNQEPDHQKYTRLATLPTLGDRAIKLLMPKN- 126
+ V D + S + + + V K++ + H Y L+ L D I
Sbjct: 109 GNFVACGGLDNMCSIYSLKSREGNV-KVSRELSAHTGY--LSCCRFLDDNNIVTSSGDTT 165
Query: 127 ----HVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITN 182
++ + KT +V H +LA++ D L S + D + K+W + C ++ T
Sbjct: 166 CALWDIETGQQKT-VFVGHTGDCMSLAVSPDFKLFISGACDASAKLWDVREGTCRQTFTG 224
Query: 183 AHDDAINAVALSDDGD-VYTGSADKKIKVW--RRSPGNKKHSLVDVLERHNSGINALALS 239
H+ INA+ +G+ + TGS D +++ R +S ++ GI ++A S
Sbjct: 225 -HESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTTYSHESII----CGITSVAFS 279
Query: 240 CDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKT 297
G +L++G D + VW+ + + VG L GH + C+ V +D V +GS D
Sbjct: 280 LSGRLLFAGYDDFNCNVWDSMKCER----VGTLSGHDNRVSCLGVTADGMAVATGSWDSF 335
Query: 298 IRIW 301
++IW
Sbjct: 336 LKIW 339
Score = 122 (48.0 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 51/216 (23%), Positives = 85/216 (39%)
Query: 128 VQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDA 187
VQ+R +T H+ + A+ D LL S S D + +W T + +I
Sbjct: 43 VQMRTRRTLRG--HLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIP-LRSSW 99
Query: 188 INAVALSDDGD-VYTGSADKKIKVW--RRSPGNKKHSLVDVLERHNSGINALALSCDGSV 244
+ A + G+ V G D ++ + GN K S L H ++ D ++
Sbjct: 100 VMTCAYAPSGNFVACGGLDNMCSIYSLKSREGNVKVSRE--LSAHTGYLSCCRFLDDNNI 157
Query: 245 LYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIWR 302
+ S D + +W+ E + VG HT + +AV D L SG+ D + ++W
Sbjct: 158 VTSSG-DTTCALWDIETGQQKTVFVG----HTGDCMSLAVSPDFKLFISGACDASAKLWD 212
Query: 303 GIDRNYTCLAVLEGHRGPVKCLAAAIDNDR-CDSSD 337
R TC GH + + + + C SD
Sbjct: 213 V--REGTCRQTFTGHESDINAICFFPNGEAICTGSD 246
Score = 119 (46.9 bits), Expect = 0.00019, P = 0.00019
Identities = 40/164 (24%), Positives = 68/164 (41%)
Query: 194 SDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRS 253
+D + + S D K+ VW NK H++ +S + A + G+ + G D
Sbjct: 65 TDSKLLVSASQDGKLIVWDTYTTNKVHAI----PLRSSWVMTCAYAPSGNFVACGGLDNM 120
Query: 254 IIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDL-VCSGSADKTIRIWRGIDRNYTCLA 312
++ + +GN+ V L HT + C + D + + S D T +W I+
Sbjct: 121 CSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSGDTTCALW-DIETGQQ-KT 178
Query: 313 VLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
V GH G C++ A+ D L SG+ D K+W +
Sbjct: 179 VFVGHTGD--CMSLAVSPD-------FKLFISGACDASAKLWDV 213
>MGI|MGI:95785 [details] [associations]
symbol:Gnb3 "guanine nucleotide binding protein (G protein),
beta 3" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=TAS] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=TAS] [GO:0006184 "GTP catabolic process" evidence=TAS]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0043005 "neuron projection" evidence=ISO] [GO:0044297 "cell
body" evidence=ISO] [GO:0051020 "GTPase binding" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 MGI:MGI:95785 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871
EMBL:AC002397 PRINTS:PR00319 GO:GO:0005834
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784
KO:K07825 OMA:NMCSIYS OrthoDB:EOG4J118C EMBL:AK014789 EMBL:BC018239
EMBL:U38494 IPI:IPI00116938 RefSeq:NP_038558.1 UniGene:Mm.68889
ProteinModelPortal:Q61011 SMR:Q61011 STRING:Q61011
PhosphoSite:Q61011 PaxDb:Q61011 PRIDE:Q61011
Ensembl:ENSMUST00000024206 GeneID:14695 KEGG:mmu:14695
InParanoid:Q61011 NextBio:286643 Bgee:Q61011 Genevestigator:Q61011
GermOnline:ENSMUSG00000023439 Uniprot:Q61011
Length = 340
Score = 180 (68.4 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 75/304 (24%), Positives = 135/304 (44%)
Query: 14 TLKGHNS--YVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAV 71
TL+GH + Y A K L + S D ++ WD T ++++ L ++ ++
Sbjct: 50 TLRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYT-TNKVHAIPLRSSWVMTCAYAPS 108
Query: 72 KSLVVLA--DKLFSAHQDHKIRVW--KINNQEPDHQKYTRLATLPTLGDRAIKLLMPKN- 126
+ V D + S + + K R K++ + H Y L+ L D I
Sbjct: 109 GNFVACGGLDNMCSIY-NLKSREGNVKVSRELSAHTGY--LSCCRFLDDNNIVTSSGDTT 165
Query: 127 ----HVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITN 182
++ + KT +V H +LA++ D L S + D + K+W + C ++ T
Sbjct: 166 CALWDIETGQQKT-VFVGHTGDCMSLAVSPDYKLFISGACDASAKLWDVREGTCRQTFTG 224
Query: 183 AHDDAINAVALSDDGD-VYTGSADKKIKVW--RRSPGNKKHSLVDVLERHNSGINALALS 239
H+ INA+ +G+ + TGS D +++ R +S ++ GI ++A S
Sbjct: 225 -HESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTAYSQESII----CGITSVAFS 279
Query: 240 CDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKT 297
G +L++G D + VW+ + + VG L GH + C+ V +D V +GS D
Sbjct: 280 LSGRLLFAGYDDFNCNVWDSLKCER----VGILSGHDNRVSCLGVTADGMAVATGSWDSF 335
Query: 298 IRIW 301
++IW
Sbjct: 336 LKIW 339
Score = 122 (48.0 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 51/216 (23%), Positives = 85/216 (39%)
Query: 128 VQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDA 187
VQ+R +T H+ + A+ D LL S S D + +W T + +I
Sbjct: 43 VQMRTRRTLRG--HLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIP-LRSSW 99
Query: 188 INAVALSDDGD-VYTGSADKKIKVW--RRSPGNKKHSLVDVLERHNSGINALALSCDGSV 244
+ A + G+ V G D ++ + GN K S L H ++ D ++
Sbjct: 100 VMTCAYAPSGNFVACGGLDNMCSIYNLKSREGNVKVSRE--LSAHTGYLSCCRFLDDNNI 157
Query: 245 LYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIWR 302
+ S D + +W+ E + VG HT + +AV D L SG+ D + ++W
Sbjct: 158 VTSSG-DTTCALWDIETGQQKTVFVG----HTGDCMSLAVSPDYKLFISGACDASAKLWD 212
Query: 303 GIDRNYTCLAVLEGHRGPVKCLAAAIDNDR-CDSSD 337
R TC GH + + + + C SD
Sbjct: 213 V--REGTCRQTFTGHESDINAICFFPNGEAICTGSD 246
Score = 119 (46.9 bits), Expect = 0.00019, P = 0.00019
Identities = 40/164 (24%), Positives = 68/164 (41%)
Query: 194 SDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRS 253
+D + + S D K+ VW NK H++ +S + A + G+ + G D
Sbjct: 65 TDSKLLVSASQDGKLIVWDTYTTNKVHAI----PLRSSWVMTCAYAPSGNFVACGGLDNM 120
Query: 254 IIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDL-VCSGSADKTIRIWRGIDRNYTCLA 312
++ + +GN+ V L HT + C + D + + S D T +W I+
Sbjct: 121 CSIYNLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSGDTTCALW-DIETGQQ-KT 178
Query: 313 VLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
V GH G C++ A+ D L SG+ D K+W +
Sbjct: 179 VFVGHTGD--CMSLAVSPDY-------KLFISGACDASAKLWDV 213
>RGD|708344 [details] [associations]
symbol:Gnb3 "guanine nucleotide binding protein (G protein), beta
polypeptide 3" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0043005 "neuron projection" evidence=IDA] [GO:0044297 "cell
body" evidence=IDA] [GO:0051020 "GTPase binding" evidence=IEA;ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 RGD:708344 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043005 GO:GO:0004871
GO:GO:0044297 PRINTS:PR00319 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS OrthoDB:EOG4J118C
EMBL:L29090 EMBL:BC086422 IPI:IPI00204239 PIR:I53871
RefSeq:NP_068630.1 UniGene:Rn.27065 ProteinModelPortal:P52287
SMR:P52287 STRING:P52287 PhosphoSite:P52287 PRIDE:P52287
Ensembl:ENSRNOT00000021481 GeneID:60449 KEGG:rno:60449
UCSC:RGD:708344 InParanoid:P52287 NextBio:612200
ArrayExpress:P52287 Genevestigator:P52287
GermOnline:ENSRNOG00000015541 Uniprot:P52287
Length = 340
Score = 180 (68.4 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 74/304 (24%), Positives = 135/304 (44%)
Query: 14 TLKGHNS--YVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAV 71
TL+GH + Y A K L + S D ++ WD T ++++ L ++ ++
Sbjct: 50 TLRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYT-TNKVHAIPLRSSWVMTCAYAPS 108
Query: 72 KSLVVLA--DKLFSAH--QDHKIRVWKINNQEPDHQKYTRLATLPTLGDRAIKLLMPKN- 126
+ V D + S + + + V K++ + H Y L+ L D I
Sbjct: 109 GNFVACGGLDNMCSIYSLKSREGNV-KVSRELSAHTGY--LSCCRFLDDNNIVTSSGDTT 165
Query: 127 ----HVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITN 182
++ + KT +V H +LA++ D L S + D + K+W + C ++ T
Sbjct: 166 CALWDIETGQQKT-VFVGHTGDCMSLAVSPDYKLFISGACDASAKLWDVREGTCRQTFTG 224
Query: 183 AHDDAINAVALSDDGD-VYTGSADKKIKVW--RRSPGNKKHSLVDVLERHNSGINALALS 239
H+ INA+ +G+ + TGS D +++ R +S ++ GI ++A S
Sbjct: 225 -HESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTAYSHESII----CGITSVAFS 279
Query: 240 CDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKT 297
G +L++G D + VW+ + + VG L GH + C+ V +D V +GS D
Sbjct: 280 LSGRLLFAGYDDFNCNVWDSLKCER----VGVLSGHDNRVSCLGVTADGMAVATGSWDSF 335
Query: 298 IRIW 301
++IW
Sbjct: 336 LKIW 339
Score = 122 (48.0 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 51/216 (23%), Positives = 85/216 (39%)
Query: 128 VQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDA 187
VQ+R +T H+ + A+ D LL S S D + +W T + +I
Sbjct: 43 VQMRTRRTLRG--HLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIP-LRSSW 99
Query: 188 INAVALSDDGD-VYTGSADKKIKVW--RRSPGNKKHSLVDVLERHNSGINALALSCDGSV 244
+ A + G+ V G D ++ + GN K S L H ++ D ++
Sbjct: 100 VMTCAYAPSGNFVACGGLDNMCSIYSLKSREGNVKVSRE--LSAHTGYLSCCRFLDDNNI 157
Query: 245 LYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIWR 302
+ S D + +W+ E + VG HT + +AV D L SG+ D + ++W
Sbjct: 158 VTSSG-DTTCALWDIETGQQKTVFVG----HTGDCMSLAVSPDYKLFISGACDASAKLWD 212
Query: 303 GIDRNYTCLAVLEGHRGPVKCLAAAIDNDR-CDSSD 337
R TC GH + + + + C SD
Sbjct: 213 V--REGTCRQTFTGHESDINAICFFPNGEAICTGSD 246
Score = 119 (46.9 bits), Expect = 0.00019, P = 0.00019
Identities = 40/164 (24%), Positives = 68/164 (41%)
Query: 194 SDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRS 253
+D + + S D K+ VW NK H++ +S + A + G+ + G D
Sbjct: 65 TDSKLLVSASQDGKLIVWDTYTTNKVHAI----PLRSSWVMTCAYAPSGNFVACGGLDNM 120
Query: 254 IIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDL-VCSGSADKTIRIWRGIDRNYTCLA 312
++ + +GN+ V L HT + C + D + + S D T +W I+
Sbjct: 121 CSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSGDTTCALW-DIETGQQ-KT 178
Query: 313 VLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
V GH G C++ A+ D L SG+ D K+W +
Sbjct: 179 VFVGHTGD--CMSLAVSPDY-------KLFISGACDASAKLWDV 213
>TAIR|locus:2194060 [details] [associations]
symbol:ATARCA "AT1G18080" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP;RCA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006417
"regulation of translation" evidence=IGI] [GO:0009845 "seed
germination" evidence=IGI] [GO:0042254 "ribosome biogenesis"
evidence=IGI] [GO:0071215 "cellular response to abscisic acid
stimulus" evidence=IEP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006096
"glycolysis" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] [GO:0009651 "response to salt
stress" evidence=RCA] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] [GO:0010476 "gibberellin mediated signaling
pathway" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009507 GO:GO:0046686 GO:GO:0006417 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042254 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0022626 EMBL:AC034107
EMBL:AC069551 EMBL:U77381 EMBL:AY035007 EMBL:AY063016 EMBL:AK318781
EMBL:AY088480 IPI:IPI00524816 IPI:IPI00930983 RefSeq:NP_173248.1
UniGene:At.22612 UniGene:At.67882 PDB:3DM0 PDBsum:3DM0
ProteinModelPortal:O24456 SMR:O24456 IntAct:O24456 STRING:O24456
PaxDb:O24456 PRIDE:O24456 EnsemblPlants:AT1G18080.1 GeneID:838388
KEGG:ath:AT1G18080 GeneFarm:2809 TAIR:At1g18080
HOGENOM:HOG000091643 InParanoid:O24456 KO:K14753 OMA:IRVWQVM
PhylomeDB:O24456 ProtClustDB:CLSN2682135 EvolutionaryTrace:O24456
Genevestigator:O24456 GermOnline:AT1G18080 GO:GO:0010476
Uniprot:O24456
Length = 327
Score = 179 (68.1 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 54/187 (28%), Positives = 85/187 (45%)
Query: 177 LESITNAHDDAINAVALS-DDGDVY-TGSADKKIKVWRRSPGNKKHSLVDV-LERHNSGI 233
L+ AH D + A+A D+ D+ + S DK I +W+ + +K + + L H+ +
Sbjct: 7 LKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFV 66
Query: 234 NALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCS 291
+ LS DG SG+ D + +W+ VG HTK +L +A D + S
Sbjct: 67 EDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVG----HTKDVLSVAFSLDNRQIVS 122
Query: 292 GSADKTIRIWRGIDR-NYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCD 350
S D+TI++W + YT EGHR V C+ R + + S S D
Sbjct: 123 ASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCV-------RFSPNTLQPTIVSASWDKT 175
Query: 351 IKVWQIS 357
+KVW +S
Sbjct: 176 VKVWNLS 182
Score = 152 (58.6 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 58/217 (26%), Positives = 101/217 (46%)
Query: 135 TCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA---HDDAINAV 191
T +V H V ++A + D + S S DRTIK+W T +C +I+ H D ++ V
Sbjct: 98 TRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLG-ECKYTISEGGEGHRDWVSCV 156
Query: 192 ALSDDG---DVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSG 248
S + + + S DK +KVW S N K L L H ++ +A+S DGS+ SG
Sbjct: 157 RFSPNTLQPTIVSASWDKTVKVWNLS--NCK--LRSTLAGHTGYVSTVAVSPDGSLCASG 212
Query: 249 ACDRSIIVWEKEEDDGNILVVGALRGHTK-SILCMAVVSDLVCSGSADKTIRIWRGIDRN 307
D +++W+ E G L +L ++ LC + +C+ + + I+IW +
Sbjct: 213 GKDGVVLLWDLAE--GKKLY--SLEANSVIHALCFSPNRYWLCAAT-EHGIKIW-----D 262
Query: 308 YTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCS 344
+++E + +K A DN ++ + C+
Sbjct: 263 LESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCT 299
Score = 131 (51.2 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 41/166 (24%), Positives = 73/166 (43%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALS-DDGDV 199
H V + L+ D S SWD +++W + H + +VA S D+ +
Sbjct: 62 HSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVG-HTKDVLSVAFSLDNRQI 120
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDG--SVLYSGACDRSIIVW 257
+ S D+ IK+W + G K+++ + E H ++ + S + + S + D+++ VW
Sbjct: 121 VSASRDRTIKLWN-TLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVW 179
Query: 258 EKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIW 301
N + L GHT + +AV D L SG D + +W
Sbjct: 180 NLS----NCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLW 221
Score = 117 (46.2 bits), Expect = 0.00030, P = 0.00030
Identities = 54/189 (28%), Positives = 84/189 (44%)
Query: 141 HVDAVSALALTKD--ETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD 198
H D VS + + + + + S SWD+T+K+W S+ K L S H ++ VA+S DG
Sbjct: 149 HRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCK-LRSTLAGHTGYVSTVAVSPDGS 207
Query: 199 VY-TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALS------C---DGSVLYSG 248
+ +G D + +W + G K +SL NS I+AL S C + +
Sbjct: 208 LCASGGKDGVVLLWDLAEGKKLYSL-----EANSVIHALCFSPNRYWLCAATEHGIKIWD 262
Query: 249 ACDRSIIV-------WEKEEDDGNILVVGALRGHTKSILCMAV--VSD--LVCSGSADKT 297
+SI+ E E+ D + G K I C ++ +D + SG D
Sbjct: 263 LESKSIVEDLKVDLKAEAEKADNS----GPAATKRKVIYCTSLNWSADGSTLFSGYTDGV 318
Query: 298 IRIWRGIDR 306
IR+W GI R
Sbjct: 319 IRVW-GIGR 326
>ZFIN|ZDB-GENE-030131-6622 [details] [associations]
symbol:wdr48 "WD repeat domain 48" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016579 "protein deubiquitination" evidence=ISS] [GO:0005634
"nucleus" evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005764 "lysosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-6622
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005764 GO:GO:0016579 KO:K15361 InterPro:IPR021772
Pfam:PF11816 CTD:57599 HOGENOM:HOG000007343 OrthoDB:EOG4HHP1W
GeneTree:ENSGT00520000055738 HOVERGEN:HBG079413 EMBL:BX284666
EMBL:BC057489 IPI:IPI00498668 RefSeq:NP_999874.1 UniGene:Dr.5219
ProteinModelPortal:Q6PFM9 Ensembl:ENSDART00000056248 GeneID:334682
KEGG:dre:334682 InParanoid:Q6PFM9 OMA:IVQCHIL NextBio:20810509
Bgee:Q6PFM9 Uniprot:Q6PFM9
Length = 677
Score = 185 (70.2 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 61/224 (27%), Positives = 97/224 (43%)
Query: 143 DAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA--HDDAINAVALSDDGD-V 199
+ V+AL L L++ D I+IW + K I + H D +N + L +G +
Sbjct: 31 NGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIILCCNGKTL 90
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEK 259
+ S+D +KVW G + L H + ALA + D ++ S DR I +W+
Sbjct: 91 ISASSDTTVKVWNAHKG----FCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDV 146
Query: 260 EE-----DDGNILVVGALRGHTKSILCMAV--VSDLVCSGSADKTIRIWRGIDRNYTCLA 312
N + +L G+ SI +A+ ++ SGS +K +R+W R L
Sbjct: 147 NTLTALTASNNTVTTSSLSGNKDSIYSLAMNQTGTVIISGSTEKVLRVWD--PRTCAKLM 204
Query: 313 VLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
L+GH VK L D +C SGS D I++W +
Sbjct: 205 KLKGHTDNVKSLLLNRDGTQC---------LSGSSDGTIRLWSL 239
Score = 173 (66.0 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 54/201 (26%), Positives = 95/201 (47%)
Query: 130 IRRHKTCTWV----HHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHD 185
+ +HK ++ HH D V+ + L + L S S D T+K+W C+ ++ H
Sbjct: 59 VNQHKQDPYIASMEHHTDWVNDIILCCNGKTLISASSDTTVKVWNAHKGFCMSTL-RTHK 117
Query: 186 DAINAVALSDDGD-VYTGSADKKIKVWRRSP-----GNKKHSLVDVLERHNSGINALALS 239
D + A+A + D + V + D++I +W + + L + I +LA++
Sbjct: 118 DYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMN 177
Query: 240 CDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD-LVC-SGSADKT 297
G+V+ SG+ ++ + VW D + L+GHT ++ + + D C SGS+D T
Sbjct: 178 QTGTVIISGSTEKVLRVW----DPRTCAKLMKLKGHTDNVKSLLLNRDGTQCLSGSSDGT 233
Query: 298 IRIWR-GIDRNYTCLAVLEGH 317
IR+W G R C+A H
Sbjct: 234 IRLWSLGQQR---CIATYRVH 251
Score = 127 (49.8 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 61/242 (25%), Positives = 99/242 (40%)
Query: 79 DKLFSAHQDHKIRVWKINNQEPD--------HQKYTRLATLPTLGDRAIKLLMPKNHVQI 130
++LF+A +D IR+W +N + D H + L G I
Sbjct: 43 NRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIILCCNGKTLISASSDTTVKVW 102
Query: 131 RRHKT-C--TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDA 187
HK C T H D V ALA KD+ L+ S DR I +W D L ++T A ++
Sbjct: 103 NAHKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLW---DVNTLTALT-ASNNT 158
Query: 188 INAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDV--------LERHNSGINALAL 238
+ +LS + D +Y+ + ++ V K + D L+ H + +L L
Sbjct: 159 VTTSSLSGNKDSIYSLAMNQTGTVIISGSTEKVLRVWDPRTCAKLMKLKGHTDNVKSLLL 218
Query: 239 SCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDL--VCSGSADK 296
+ DG+ SG+ D +I +W G + R H + + + V + SG D+
Sbjct: 219 NRDGTQCLSGSSDGTIRLWSL----GQQRCIATYRVHDEGVWALQVNEAFTHIYSGGRDR 274
Query: 297 TI 298
I
Sbjct: 275 KI 276
Score = 126 (49.4 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 54/219 (24%), Positives = 95/219 (43%)
Query: 12 LTTLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKG 69
+ +++ H +V+ + L GK L + SSD V+ W+ + + F + + K
Sbjct: 68 IASMEHHTDWVNDIILCCNGKTLISASSDTTVKVWNAH-------KGFCMST--LRTHKD 118
Query: 70 AVKSLVVLADK--LFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLG--DRAIKLLMPK 125
VK+L DK + SA D +I +W +N + T G D L M +
Sbjct: 119 YVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQ 178
Query: 126 NHV--------QIRR---HKTCTWVH----HVDAVSALALTKDETLLYSVSWDRTIKIWR 170
++ R +TC + H D V +L L +D T S S D TI++W
Sbjct: 179 TGTVIISGSTEKVLRVWDPRTCAKLMKLKGHTDNVKSLLLNRDGTQCLSGSSDGTIRLWS 238
Query: 171 TSDFKCLESITNAHDDAINAVALSDD-GDVYTGSADKKI 208
+C+ + HD+ + A+ +++ +Y+G D+KI
Sbjct: 239 LGQQRCIATY-RVHDEGVWALQVNEAFTHIYSGGRDRKI 276
Score = 123 (48.4 bits), Expect = 0.00020, P = 0.00020
Identities = 54/251 (21%), Positives = 109/251 (43%)
Query: 32 LYTGSSDNEVRSWDCNTFSSE---LDQEFLSN--NNIVAV--GKGAVKSLVVLADKLFSA 84
L+T D+ +R W N + E ++ N+I+ GK + + K+++A
Sbjct: 45 LFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIILCCNGKTLISASSDTTVKVWNA 104
Query: 85 HQDHKIRVWKINNQEPDHQKYTRLATL-PTLG-DRAIKLLMPKNHVQIRRHK----TCTW 138
H+ + + + Y + L + G DR I L + T +
Sbjct: 105 HKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSL 164
Query: 139 VHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDG- 197
+ D++ +LA+ + T++ S S ++ +++W L + H D + ++ L+ DG
Sbjct: 165 SGNKDSIYSLAMNQTGTVIISGSTEKVLRVWDPRTCAKLMKL-KGHTDNVKSLLLNRDGT 223
Query: 198 DVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVW 257
+GS+D I++W S G ++ + H+ G+ AL ++ + +YSG DR I
Sbjct: 224 QCLSGSSDGTIRLW--SLGQQR--CIATYRVHDEGVWALQVNEAFTHIYSGGRDRKIYCT 279
Query: 258 EKEEDDGNILV 268
+ D +L+
Sbjct: 280 DLRNPDMRVLI 290
>UNIPROTKB|E1BB14 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS
EMBL:DAAA02014455 IPI:IPI00703992 RefSeq:NP_001179276.1
UniGene:Bt.16171 ProteinModelPortal:E1BB14
Ensembl:ENSBTAT00000021348 GeneID:513340 KEGG:bta:513340
NextBio:20870819 Uniprot:E1BB14
Length = 340
Score = 179 (68.1 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 73/302 (24%), Positives = 133/302 (44%)
Query: 14 TLKGHNS--YVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAV 71
TL+GH + Y A K L + S D ++ WD T ++++ L ++ ++
Sbjct: 50 TLRGHLAKIYAMHWATDSKLLVSASQDGKLIVWDTYT-TNKVHAIPLRSSWVMTCAYAPS 108
Query: 72 KSLVVLA--DKLFSAH--QDHKIRVWKINNQEPDHQKYTRLATLPTLGDRAIKLLMPKN- 126
+ V D + S + + + V K++ + H Y L+ L D I
Sbjct: 109 GNFVACGGLDNMCSIYSLKSREGNV-KVSRELSAHTGY--LSCCRFLDDNNIVTSSGDTT 165
Query: 127 ----HVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITN 182
++ + KT +V H +LA++ D L S + D + K+W + C ++ T
Sbjct: 166 CALWDIETGQQKT-VFVGHTGDCMSLAVSPDFRLFISGACDASAKLWDVREGTCRQTFTG 224
Query: 183 AHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCD 241
H+ INA+ +G+ + TGS D +++ + + E GI ++A S
Sbjct: 225 -HESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTTYAH--ESIICGITSVAFSLS 281
Query: 242 GSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIR 299
G +L++G D + VW+ + + VG L GH + C+ V +D V +GS D ++
Sbjct: 282 GRLLFAGYDDFNCNVWDSMKCER----VGILSGHDNRVSCLGVTADGMAVATGSWDSFLK 337
Query: 300 IW 301
IW
Sbjct: 338 IW 339
Score = 122 (48.0 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 51/216 (23%), Positives = 85/216 (39%)
Query: 128 VQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDA 187
VQ+R +T H+ + A+ D LL S S D + +W T + +I
Sbjct: 43 VQMRTRRTLRG--HLAKIYAMHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIP-LRSSW 99
Query: 188 INAVALSDDGD-VYTGSADKKIKVW--RRSPGNKKHSLVDVLERHNSGINALALSCDGSV 244
+ A + G+ V G D ++ + GN K S L H ++ D ++
Sbjct: 100 VMTCAYAPSGNFVACGGLDNMCSIYSLKSREGNVKVSRE--LSAHTGYLSCCRFLDDNNI 157
Query: 245 LYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIWR 302
+ S D + +W+ E + VG HT + +AV D L SG+ D + ++W
Sbjct: 158 VTSSG-DTTCALWDIETGQQKTVFVG----HTGDCMSLAVSPDFRLFISGACDASAKLWD 212
Query: 303 GIDRNYTCLAVLEGHRGPVKCLAAAIDNDR-CDSSD 337
R TC GH + + + + C SD
Sbjct: 213 V--REGTCRQTFTGHESDINAICFFPNGEAICTGSD 246
Score = 119 (46.9 bits), Expect = 0.00019, P = 0.00019
Identities = 40/164 (24%), Positives = 68/164 (41%)
Query: 194 SDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRS 253
+D + + S D K+ VW NK H++ +S + A + G+ + G D
Sbjct: 65 TDSKLLVSASQDGKLIVWDTYTTNKVHAI----PLRSSWVMTCAYAPSGNFVACGGLDNM 120
Query: 254 IIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDL-VCSGSADKTIRIWRGIDRNYTCLA 312
++ + +GN+ V L HT + C + D + + S D T +W I+
Sbjct: 121 CSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSGDTTCALW-DIETGQQ-KT 178
Query: 313 VLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
V GH G C++ A+ D L SG+ D K+W +
Sbjct: 179 VFVGHTGD--CMSLAVSPD-------FRLFISGACDASAKLWDV 213
>DICTYBASE|DDB_G0286735 [details] [associations]
symbol:DDB_G0286735 "C3HC4-type zinc
finger-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR008974 InterPro:IPR013323
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00184 SMART:SM00320 dictyBase:DDB_G0286735 Prosite:PS00518
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AAFI02000089
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10 KO:K10646
RefSeq:XP_637649.1 ProteinModelPortal:Q54LB2
EnsemblProtists:DDB0187121 GeneID:8625789 KEGG:ddi:DDB_G0286735
InParanoid:Q54LB2 OMA:NTNIMIC ProtClustDB:CLSZ2430092
Uniprot:Q54LB2
Length = 694
Score = 183 (69.5 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 68/258 (26%), Positives = 118/258 (45%)
Query: 3 NLSVVDHHCLTTLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNN 62
+L + C T GHN + + + L +GSSD +V+ WD T + + LS +
Sbjct: 416 DLKIPQLKCKGTFVGHNGPIWCMTVTNGMLISGSSDMKVKIWDLVTLKCK---QVLSGH- 471
Query: 63 IVAVGKGAVKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLGDRAIKLL 122
+G V +L V+ ++LFS D IRVW + E T+ L A L
Sbjct: 472 -----EGIVHTLAVIGNRLFSGSSDQTIRVWDLETFEC-LSVLRDDNTVCALVIAAGYLF 525
Query: 123 MPK-NHVQIRRHKTCTWVHHVDAVS--ALALTKDETLLYSVSWDRTIKIWRTSDFKCLES 179
H+++ +T V + S ALT LYS +++ +++W ++F+C+++
Sbjct: 526 SGSFQHIKVWDLETFECVQTLKGNSHWVRALTVSGGYLYSGAYN-VVRVWDLANFECVQT 584
Query: 180 ITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALS 239
I +I ++A+S+ + G+ + I VW +++ LE H + LA+S
Sbjct: 585 IPGG-SGSIYSLAVSNRR-LLAGTYENTIVVWNLDT----FEIINKLEGHIGAVYTLAVS 638
Query: 240 CDGSVLYSGACDRSIIVW 257
YSG+ D +I VW
Sbjct: 639 --DKKFYSGSYDSTIKVW 654
Score = 164 (62.8 bits), Expect = 6.1e-09, P = 6.1e-09
Identities = 45/154 (29%), Positives = 82/154 (53%)
Query: 149 ALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSADKKI 208
ALT LYS +++ +++W ++F+C+++I +I ++A+S+ + G+ + I
Sbjct: 555 ALTVSGGYLYSGAYN-VVRVWDLANFECVQTIPGG-SGSIYSLAVSNRR-LLAGTYENTI 611
Query: 209 KVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILV 268
VW +++ LE H + LA+S YSG+ D +I VW + +++
Sbjct: 612 VVWNLDT----FEIINKLEGHIGAVYTLAVS--DKKFYSGSYDSTIKVW-----NDSLVC 660
Query: 269 VGALRGHTKSILCMAVVSDLVCSGSADKTIRIWR 302
V L HT S+ + V S V SGSAD +I++W+
Sbjct: 661 VQTLNRHTSSVESIVVSSGCVFSGSADNSIKVWK 694
Score = 140 (54.3 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 58/193 (30%), Positives = 88/193 (45%)
Query: 170 RTSDFKCLESITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERH 229
R D + E ++ DD + G +++GS + IKVW + V L+ +
Sbjct: 495 RVWDLETFECLSVLRDDNTVCALVIAAGYLFSGSF-QHIKVWDL----ETFECVQTLKGN 549
Query: 230 NSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLV 289
+ + AL +S G LYSGA + + VW D N V + G + SI +AV + +
Sbjct: 550 SHWVRALTVS--GGYLYSGAYN-VVRVW----DLANFECVQTIPGGSGSIYSLAVSNRRL 602
Query: 290 CSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDC 349
+G+ + TI +W +D + + LEGH G V LA SD + SGS D
Sbjct: 603 LAGTYENTIVVWN-LD-TFEIINKLEGHIGAVYTLAV---------SDKKFY--SGSYDS 649
Query: 350 DIKVWQISFPLVR 362
IKVW S V+
Sbjct: 650 TIKVWNDSLVCVQ 662
>SGD|S000000680 [details] [associations]
symbol:TUP1 "General repressor of transcription" species:4932
"Saccharomyces cerevisiae" [GO:0001191 "RNA polymerase II
transcription factor binding transcription factor activity involved
in negative regulation of transcription" evidence=IMP;IDA;IPI]
[GO:0017053 "transcriptional repressor complex" evidence=IDA]
[GO:0001198 "negative regulation of mating-type specific
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000433 "negative regulation of transcription from RNA
polymerase II promoter by glucose" evidence=IMP] [GO:2000531
"regulation of fatty acid biosynthetic process by regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0036033 "mediator
complex binding" evidence=IDA;IPI] [GO:0042826 "histone deacetylase
binding" evidence=IDA;IPI] [GO:0043486 "histone exchange"
evidence=IMP] [GO:0061418 "regulation of transcription from RNA
polymerase II promoter in response to hypoxia" evidence=IMP]
[GO:0061392 "regulation of transcription from RNA polymerase II
promoter in response to osmotic stress" evidence=IMP] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IMP] [GO:0042393 "histone
binding" evidence=IDA;IPI] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA;IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0035955 "negative regulation of dipeptide transport by negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IMP] [GO:0016584 "nucleosome positioning"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000000680 GO:GO:0017053 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GO:GO:2001020 GO:GO:0043486 GO:GO:0042393 GO:GO:0042826
GO:GO:0061418 GO:GO:0016584 GO:GO:0043130 GO:GO:0080025
GO:GO:0001191 GO:GO:0035955 GO:GO:0000433 GO:GO:0007070
GO:GO:2000531 GO:GO:0061392 GeneTree:ENSGT00700000104507
GO:GO:0001198 GO:GO:0036033 HOGENOM:HOG000200558 KO:K06666
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:M31733 EMBL:M35861 EMBL:X16365 PIR:JN0133 RefSeq:NP_010007.1
PDB:1ERJ PDB:3VP8 PDB:3VP9 PDBsum:1ERJ PDBsum:3VP8 PDBsum:3VP9
ProteinModelPortal:P16649 SMR:P16649 DIP:DIP-512N IntAct:P16649
MINT:MINT-648551 STRING:P16649 PaxDb:P16649 PeptideAtlas:P16649
EnsemblFungi:YCR084C GeneID:850445 KEGG:sce:YCR084C CYGD:YCR084c
OMA:TISESCI EvolutionaryTrace:P16649 NextBio:966057
Genevestigator:P16649 GermOnline:YCR084C Uniprot:P16649
Length = 713
Score = 183 (69.5 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 59/214 (27%), Positives = 99/214 (46%)
Query: 157 LYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSD-DGD-VYTGSADKKIKVWRRS 214
L S S DRT++IW +C S+T + +D + VA+S DG + GS D+ ++VW
Sbjct: 500 LVSGSGDRTVRIWDLRTGQC--SLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSE 557
Query: 215 PGNKKHSLVDVLER---HNSGINALALSCDGSVLYSGACDRSIIVWEKE----EDDGNIL 267
G L E H + ++ + DG + SG+ DRS+ +W + + D
Sbjct: 558 TGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTP 617
Query: 268 VVGALR----GHTKSILCMAVVS--DLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPV 321
G GH +L +A + + SGS D+ + W N L +L+GHR V
Sbjct: 618 NSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNP--LLMLQGHRNSV 675
Query: 322 KCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQ 355
++ A+ N + + + +GS DC ++W+
Sbjct: 676 --ISVAVANGSPLGPEYN-VFATGSGDCKARIWK 706
Score = 143 (55.4 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 82/333 (24%), Positives = 137/333 (41%)
Query: 46 CNTFSSELDQEFLSN--NNIVAVGKGAVKSLVV-LADKLFSAHQDHKIRVWKINNQEPDH 102
C FS+ D E+L+ N V + + SLV L+D SA +H+ + + NN
Sbjct: 349 CVKFSN--DGEYLATGCNKTTQVYRVSDGSLVARLSDD--SAANNHRNSITE-NNTTTST 403
Query: 103 QKYTRLATLPTLGDRAIKLLMPKNHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSW 162
T T T + + T + + ++ + D L + +
Sbjct: 404 DNNTMTTTTTTTITTTAMTSAAELAKDVENLNTSSSPSSDLYIRSVCFSPDGKFLATGAE 463
Query: 163 DRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHS 221
DR I+IW + K + I H+ I ++ GD + +GS D+ +++W G + S
Sbjct: 464 DRLIRIWDIENRKIV-MILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTG--QCS 520
Query: 222 LVDVLERHNSGINALALSC-DGSVLYSGACDRSIIVWEKEE-------DDGNILVVGALR 273
L +E G+ +A+S DG + +G+ DR++ VW+ E D N G
Sbjct: 521 LTLSIE---DGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSEN--ESGT-- 573
Query: 274 GHTKSILCMAVVSD--LVCSGSADKTIRIWRGIDRNY----------TCLAVLEGHRGPV 321
GH S+ + D V SGS D+++++W + N TC GH+ V
Sbjct: 574 GHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFV 633
Query: 322 KCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVW 354
+A ND Y++ SGS D + W
Sbjct: 634 LSVATT-QNDE-------YIL-SGSKDRGVLFW 657
Score = 125 (49.1 bits), Expect = 0.00013, P = 0.00013
Identities = 46/191 (24%), Positives = 84/191 (43%)
Query: 173 DFKCLESITNAHDDA-INAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHN 230
D + L + ++ D I +V S DG + TG+ D+ I++W N+K +V +L+ H
Sbjct: 430 DVENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIE--NRK--IVMILQGHE 485
Query: 231 SGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVC 290
I +L G L SG+ DR++ +W+ G + ++ ++ +
Sbjct: 486 QDIYSLDYFPSGDKLVSGSGDRTVRIWDLRT--GQCSLTLSIEDGVTTVAVSPGDGKYIA 543
Query: 291 SGSADKTIRIWRG-----IDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSG 345
+GS D+ +R+W ++R + GH+ V + D V SG
Sbjct: 544 AGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQS---------VVSG 594
Query: 346 SLDCDIKVWQI 356
SLD +K+W +
Sbjct: 595 SLDRSVKLWNL 605
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 176 (67.0 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 46/149 (30%), Positives = 76/149 (51%)
Query: 163 DRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHS 221
DR ++W T ++ L I H + + + V TGS+D+ +++W GN
Sbjct: 562 DRVARLWATDHYQPLR-IFAGHLADVTCTRFHPNSNYVATGSSDRTVRLWDVLNGN---- 616
Query: 222 LVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILC 281
V + H I++LA S +G L SG+ D +++W D G+ L++ L+GHT +I
Sbjct: 617 CVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLW----DIGHGLMIAELKGHTGTIYA 672
Query: 282 MAVVSD--LVCSGSADKTIRIW---RGID 305
+ D ++ SGS D T+R+W R ID
Sbjct: 673 LKFSRDGEIIASGSIDNTVRLWDVMRAID 701
Score = 132 (51.5 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 51/185 (27%), Positives = 81/185 (43%)
Query: 180 ITNAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALAL 238
I + H + V+ S D + + + S D I++W LV + HN +
Sbjct: 494 ILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFT---CLVGY-KGHNYPVWDTQF 549
Query: 239 SCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVV--SDLVCSGSADK 296
S G SG DR +W D L + A GH + C S+ V +GS+D+
Sbjct: 550 SPFGYYFVSGGHDRVARLWAT--DHYQPLRIFA--GHLADVTCTRFHPNSNYVATGSSDR 605
Query: 297 TIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
T+R+W ++ N C+ + GH+GP+ LA S + +L SGS D + +W I
Sbjct: 606 TVRLWDVLNGN--CVRIFTGHKGPIHSLAF--------SPNGKFLA-SGSTDGRVLLWDI 654
Query: 357 SFPLV 361
L+
Sbjct: 655 GHGLM 659
Score = 131 (51.2 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 56/241 (23%), Positives = 104/241 (43%)
Query: 53 LDQEFLSNNNIVAVGKGAVKSLVVLADK--LFSAHQDHKIRVWKI-----------NNQE 99
+D++ S + I+ G V + D+ L S+ +D IR+W + +N
Sbjct: 484 MDEKTSSESKILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVGYKGHNYP 543
Query: 100 PDHQKYTRLATLPTLG--DRAIKLLMPKNHVQIRRHKTCTWVHHVDAVSALALTKDETLL 157
+++ G DR +L +H Q R + H+ V+ + +
Sbjct: 544 VWDTQFSPFGYYFVSGGHDRVARL-WATDHYQPLR----IFAGHLADVTCTRFHPNSNYV 598
Query: 158 YSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPG 216
+ S DRT+++W + C+ T H I+++A S +G + +GS D ++ +W G
Sbjct: 599 ATGSSDRTVRLWDVLNGNCVRIFTG-HKGPIHSLAFSPNGKFLASGSTDGRVLLWDIGHG 657
Query: 217 NKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWE--KEEDDGNILVVGALRG 274
++ L+ H I AL S DG ++ SG+ D ++ +W+ + DD A G
Sbjct: 658 ----LMIAELKGHTGTIYALKFSRDGEIIASGSIDNTVRLWDVMRAIDDVETDDFTAATG 713
Query: 275 H 275
H
Sbjct: 714 H 714
Score = 51 (23.0 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 15 LKGHNSYVSSLALAG--KFLYTGSSDNEVRSWDCNTFS 50
L GH+ V ++ + +L + S D +R W TF+
Sbjct: 495 LHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFT 532
>TAIR|locus:2008159 [details] [associations]
symbol:RACK1B_AT "AT1G48630" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0048364 "root development"
evidence=IGI] [GO:0048367 "shoot system development" evidence=IGI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IGI]
[GO:0009845 "seed germination" evidence=IGI] [GO:0042254 "ribosome
biogenesis" evidence=IGI] [GO:0071215 "cellular response to
abscisic acid stimulus" evidence=IEP] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0042545 "cell wall modification"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006417 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0042254 GO:GO:0048364 GO:GO:0009845 GO:GO:0004871
GO:GO:0071215 GO:GO:0048367 GO:GO:0022626 EMBL:AC073555 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AC074308 EMBL:AY059723 EMBL:AY091352 EMBL:AY087855 EMBL:Z26552
IPI:IPI00531991 RefSeq:NP_175296.1 UniGene:At.17343
ProteinModelPortal:Q9C4Z6 SMR:Q9C4Z6 IntAct:Q9C4Z6 STRING:Q9C4Z6
PaxDb:Q9C4Z6 PRIDE:Q9C4Z6 EnsemblPlants:AT1G48630.1 GeneID:841284
KEGG:ath:AT1G48630 GeneFarm:2979 TAIR:At1g48630 InParanoid:Q9C4Z6
OMA:NCKLRNT PhylomeDB:Q9C4Z6 Genevestigator:Q9C4Z6 Uniprot:Q9C4Z6
Length = 326
Score = 176 (67.0 bits), Expect = 5.3e-11, P = 5.3e-11
Identities = 51/180 (28%), Positives = 86/180 (47%)
Query: 183 AHDDAINAVALS-DDGDVY-TGSADKKIKVWRRSPGNKKHSLVDV-LERHNSGINALALS 239
AH D + A+A D+ DV T S DK I +W+ + +K + + + H+ + + LS
Sbjct: 13 AHTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLS 72
Query: 240 CDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKT 297
DG SG+ D + +W+ + VG HTK +L +A +D + S S D+T
Sbjct: 73 SDGQFALSGSWDGELRLWDLATGESTRRFVG----HTKDVLSVAFSTDNRQIVSASRDRT 128
Query: 298 IRIWRGIDR-NYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
I++W + YT ++ +GH+ V C+ R + + S S D +KVW +
Sbjct: 129 IKLWNTLGECKYT-ISEADGHKEWVSCV-------RFSPNTLVPTIVSASWDKTVKVWNL 180
Score = 167 (63.8 bits), Expect = 5.9e-10, P = 5.9e-10
Identities = 63/215 (29%), Positives = 100/215 (46%)
Query: 135 TCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA--HDDAINAVA 192
T +V H V ++A + D + S S DRTIK+W T +C +I+ A H + ++ V
Sbjct: 98 TRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLG-ECKYTISEADGHKEWVSCVR 156
Query: 193 LSDDGDVYT---GSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGA 249
S + V T S DK +KVW N K L + L H+ +N +A+S DGS+ SG
Sbjct: 157 FSPNTLVPTIVSASWDKTVKVWNLQ--NCK--LRNTLAGHSGYLNTVAVSPDGSLCASGG 212
Query: 250 CDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYT 309
D I++W+ E G L G LC + +C+ + + +IRIW +
Sbjct: 213 KDGVILLWDLAE--GKKLY-SLEAGSIIHSLCFSPNRYWLCAAT-ENSIRIW-----DLE 263
Query: 310 CLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCS 344
+V+E + +K A D + T + C+
Sbjct: 264 SKSVVEDLKVDLKAEAEKTDGSTGIGNKTKVIYCT 298
Score = 134 (52.2 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 51/220 (23%), Positives = 98/220 (44%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H V + L+ D S SWD +++W + + D ++ +D+ +
Sbjct: 62 HSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIV 121
Query: 201 TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSV--LYSGACDRSIIVWE 258
+ S D+ IK+W + G K+++ + + H ++ + S + V + S + D+++ VW
Sbjct: 122 SASRDRTIKLWN-TLGECKYTISEA-DGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWN 179
Query: 259 KEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIWRGIDRNYTCLAVLEG 316
+ N + L GH+ + +AV D L SG D I +W D LA EG
Sbjct: 180 LQ----NCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLW---D-----LA--EG 225
Query: 317 HRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
+ A +I + C S + Y +C+ + + I++W +
Sbjct: 226 KK-LYSLEAGSIIHSLCFSPNR-YWLCAAT-ENSIRIWDL 262
Score = 123 (48.4 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 48/184 (26%), Positives = 82/184 (44%)
Query: 141 HVDAVSALALTKDETL--LYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD 198
H + VS + + + + + S SWD+T+K+W + K L + H +N VA+S DG
Sbjct: 148 HKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCK-LRNTLAGHSGYLNTVAVSPDGS 206
Query: 199 VY-TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINA----LALSCDGSVLYSGACDRS 253
+ +G D I +W + G K +SL H+ + L + + S+ +S
Sbjct: 207 LCASGGKDGVILLWDLAEGKKLYSLEAGSIIHSLCFSPNRYWLCAATENSIRIWDLESKS 266
Query: 254 IIV-------WEKEEDDGNILVVGALRGHTKSILCMAVV----SDLVCSGSADKTIRIWR 302
++ E E+ DG+ + TK I C ++ + + SG D IR+W
Sbjct: 267 VVEDLKVDLKAEAEKTDGST----GIGNKTKVIYCTSLNWSADGNTLFSGYTDGVIRVW- 321
Query: 303 GIDR 306
GI R
Sbjct: 322 GIGR 325
>UNIPROTKB|B3KVK2 [details] [associations]
symbol:GNB1 "cDNA FLJ16663 fis, clone THYMU2005759, highly
similar to Guanine nucleotide-binding proteinG(I)/G(S)/G(T) subunit
beta 1" species:9606 "Homo sapiens" [GO:0001917 "photoreceptor
inner segment" evidence=IEA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=IEA] [GO:0007200 "phospholipase C-activating
G-protein coupled receptor signaling pathway" evidence=IEA]
[GO:0007204 "elevation of cytosolic calcium ion concentration"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0010659 "cardiac muscle cell apoptotic process" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0042622 "photoreceptor
outer segment membrane" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 GO:GO:0007204 GO:GO:0007200 GO:GO:0001750
EMBL:AL109917 EMBL:AL031282 GO:GO:0050909 GO:GO:0005834
HOVERGEN:HBG000188 UniGene:Hs.430425 HGNC:HGNC:4396 ChiTaRS:GNB1
EMBL:AK122949 IPI:IPI00642117 ProteinModelPortal:B3KVK2 SMR:B3KVK2
STRING:B3KVK2 PRIDE:B3KVK2 Ensembl:ENST00000455156
OrthoDB:EOG4GHZR3 ArrayExpress:B3KVK2 Bgee:B3KVK2 Uniprot:B3KVK2
Length = 240
Score = 168 (64.2 bits), Expect = 5.6e-11, P = 5.6e-11
Identities = 48/173 (27%), Positives = 83/173 (47%)
Query: 134 KTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVAL 193
+T T+ H V +L+L D L S + D + K+W + C ++ T H+ INA+
Sbjct: 76 QTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTG-HESDINAICF 134
Query: 194 SDDGDVY-TGSADKKIKVW--RRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGAC 250
+G+ + TGS D +++ R +S +++ GI +++ S G +L +G
Sbjct: 135 FPNGNAFATGSDDATCRLFDLRADQELMTYSHDNII----CGITSVSFSKSGRLLLAGYD 190
Query: 251 DRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIW 301
D + VW+ + D G L GH + C+ V D V +GS D ++IW
Sbjct: 191 DFNCNVWDALKADR----AGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 239
>UNIPROTKB|Q32PJ6 [details] [associations]
symbol:CIAO1 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1" species:9913 "Bos taurus" [GO:0097361 "CIA
complex" evidence=ISS] [GO:0071817 "MMXD complex" evidence=ISS]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
[GO:0007059 "chromosome segregation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226 GO:GO:0071817
HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:BC108091 IPI:IPI00699811
RefSeq:NP_001032559.1 RefSeq:XP_003585196.1 UniGene:Bt.51463
ProteinModelPortal:Q32PJ6 STRING:Q32PJ6 Ensembl:ENSBTAT00000020797
GeneID:100850134 GeneID:540069 KEGG:bta:100850134 KEGG:bta:540069
CTD:9391 GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532
InParanoid:Q32PJ6 OrthoDB:EOG4MCX0N NextBio:20878397 GO:GO:0097361
Uniprot:Q32PJ6
Length = 339
Score = 176 (67.0 bits), Expect = 6.1e-11, P = 6.1e-11
Identities = 63/237 (26%), Positives = 111/237 (46%)
Query: 71 VKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLGDRAIKLLMPKNHVQI 130
+K +VL ++ AH D R W + P T LA+ GDR++++ + I
Sbjct: 1 MKDSLVLLSRIL-AHPDS--RCWFLA-WNPAG---TLLASCG--GDRSVRIWGREGDSWI 51
Query: 131 RRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTS--DFKCLESITNAHDDAI 188
+ C H V +A + L S S+D T IW+ + DF+C+ ++ H++ +
Sbjct: 52 CKSVLCEG--HQRTVRKVAWSPCGNYLASASFDATTCIWKKNEDDFECVTTL-EGHENEV 108
Query: 189 NAVALSDDGDVY-TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYS 247
+VA + G++ T S DK + VW ++ + V VL H + + +L S
Sbjct: 109 KSVAWAPSGNLLATCSRDKSVWVWEVDEEDE-YECVSVLNSHTQDVKHVVWHPSQELLAS 167
Query: 248 GACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAV--VSDLVCSGSADKTIRIWR 302
+ D ++ ++ +EEDD + L GH ++ +A + S S D+T+RIWR
Sbjct: 168 ASYDDTVKLYREEEDDW--VCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWR 222
Score = 134 (52.2 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 45/170 (26%), Positives = 78/170 (45%)
Query: 205 DKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDG 264
D+ +++W R G+ + E H + +A S G+ L S + D + +W+K EDD
Sbjct: 37 DRSVRIWGRE-GDSWICKSVLCEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNEDDF 95
Query: 265 NILVVGALRGHTKSI--LCMAVVSDLVCSGSADKTIRIWRGIDRN--YTCLAVLEGHRGP 320
V L GH + + A +L+ + S DK++ +W +D Y C++VL H
Sbjct: 96 EC--VTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWE-VDEEDEYECVSVLNSHTQD 152
Query: 321 VK---------CLAAAIDND--RCDSSDTSYLVCSGSLDC-DIKVWQISF 358
VK LA+A +D + + VC +L+ + VW ++F
Sbjct: 153 VKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAF 202
Score = 87 (35.7 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
Identities = 37/146 (25%), Positives = 62/146 (42%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRT---------------SDFKCLESITNAHD 185
H V +LA L S S DRT++IWR + +KC+ +++ H
Sbjct: 193 HESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSEASWKCVCTLSGFHS 252
Query: 186 DAINAVALSD-DGDVYTGSADKKIKVWRRSPGNKKH----SLV-DVLERHNSGINALALS 239
I VA G + T D I+V+ PG+ SL V + H+ +N +A +
Sbjct: 253 RTIYDVAWCQLTGTLATACGDDAIRVFEEDPGSDPQQPTFSLTAHVPQAHSQDVNCVAWN 312
Query: 240 C-DGSVLYSGACDRSIIVWEKEEDDG 264
+ +L S + D + W+ + +G
Sbjct: 313 PKERGLLASCSDDGELAFWKYQPSEG 338
Score = 78 (32.5 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
Identities = 18/40 (45%), Positives = 23/40 (57%)
Query: 8 DHHCLTTLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWD 45
D C+TTL+GH + V S+A A G L T S D V W+
Sbjct: 94 DFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWE 133
>RGD|1305142 [details] [associations]
symbol:Tbl3 "transducin (beta)-like 3" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1305142 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 GO:GO:0032040 HSSP:P63005 CTD:10607
HOGENOM:HOG000188765 HOVERGEN:HBG058869 KO:K14555 OrthoDB:EOG42JNQR
GeneTree:ENSGT00690000102183 EMBL:BC085837 IPI:IPI00369236
RefSeq:NP_001008278.1 UniGene:Rn.32013 ProteinModelPortal:Q5U2W5
STRING:Q5U2W5 PRIDE:Q5U2W5 Ensembl:ENSRNOT00000018405 GeneID:287120
KEGG:rno:287120 UCSC:RGD:1305142 InParanoid:Q5U2W5 NextBio:625544
Genevestigator:Q5U2W5 Uniprot:Q5U2W5
Length = 800
Score = 168 (64.2 bits), Expect = 7.0e-11, Sum P(2) = 7.0e-11
Identities = 74/309 (23%), Positives = 141/309 (45%)
Query: 73 SLVVLADKLFSAHQDHKIRVWKINNQEPDHQ--KYTR-LATLPTLGDRAIKLLMPKNH-- 127
+L A L + DH + +++ + + Q Y+ + + LG +++ N
Sbjct: 299 TLARAAGLLLTVTADHNLLLYEARSLQLQKQFAGYSEEVLDVRFLGPNDSHIIVASNSPC 358
Query: 128 VQIRRHKT--CTWVH-HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESIT--N 182
+++ +T C +H H D V AL + + L S + D++I+IWR + + + +
Sbjct: 359 LKVFELQTLACQILHGHTDIVLALDVFRKGWLFASCAKDQSIRIWRMNKAGQVACVAQGS 418
Query: 183 AHDDAINAVALS--DDGDVYTGSADKKIKVW---RRSPGNKKHSLVDVL-------ER-H 229
H ++ + S + + TGS D +K+W P S D++ +R H
Sbjct: 419 GHTHSVGTICCSRLKESFLVTGSQDCTVKLWPLPEALPSKNTASDGDLIPLQAQSTQRCH 478
Query: 230 NSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSI--LCMAVVSD 287
+ IN+LA+S + +L +G+ DR+ +W + ++G GH + + + +
Sbjct: 479 DKDINSLAVSPNDKLLATGSQDRTAKLWALPQCQ----LLGVFSGHRRGLWNVQFSPTDQ 534
Query: 288 LVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSL 347
++ + SAD TI++W D ++CL EGH V +A S + L+ SGS
Sbjct: 535 VLATASADGTIKLWALQD--FSCLKTFEGHDASVLKVAFV--------SRGAQLLSSGS- 583
Query: 348 DCDIKVWQI 356
D +K+W I
Sbjct: 584 DGLLKLWTI 592
Score = 125 (49.1 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 47/194 (24%), Positives = 82/194 (42%)
Query: 154 ETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDG-DVYTGSADKKIKVWR 212
+ +L + S D TIK+W DF CL++ HD ++ VA G + + +D +K+W
Sbjct: 533 DQVLATASADGTIKLWALQDFSCLKTF-EGHDASVLKVAFVSRGAQLLSSGSDGLLKLWT 591
Query: 213 RSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGAL 272
K + V L+ H + L S +G D II+W K+ + A
Sbjct: 592 I----KSNECVRTLDAHEDKVWGLHCSRLDDHAITGGSDSRIILW-KDVTEAEQAEEQAK 646
Query: 273 RGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEG-HRGPVKC--LAAAID 329
R + ++ + +L+ + + + +DR +T L V++ R P C L A +
Sbjct: 647 R--EEQVIKQQELDNLLHEKRYLRALGLAISLDRPHTVLTVIQAIRRDPEACEKLEATVL 704
Query: 330 NDRCDSSDTSYLVC 343
R D + C
Sbjct: 705 RLRRDQKEALLRFC 718
Score = 122 (48.0 bits), Expect = 9.6e-06, Sum P(2) = 9.6e-06
Identities = 41/167 (24%), Positives = 75/167 (44%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H +++LA++ ++ LL + S DRT K+W + L + + H + V S V
Sbjct: 478 HDKDINSLAVSPNDKLLATGSQDRTAKLWALPQCQLL-GVFSGHRRGLWNVQFSPTDQVL 536
Query: 201 -TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEK 259
T SAD IK+W + S + E H++ + +A G+ L S D + +W
Sbjct: 537 ATASADGTIKLWAL----QDFSCLKTFEGHDASVLKVAFVSRGAQLLSSGSDGLLKLWTI 592
Query: 260 EEDDGNILVVGALRGHTKSI--LCMAVVSDLVCSGSADKTIRIWRGI 304
+ ++ V L H + L + + D +G +D I +W+ +
Sbjct: 593 KSNE----CVRTLDAHEDKVWGLHCSRLDDHAITGGSDSRIILWKDV 635
Score = 59 (25.8 bits), Expect = 7.0e-11, Sum P(2) = 7.0e-11
Identities = 27/95 (28%), Positives = 40/95 (42%)
Query: 5 SVVDHHCLTTLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTF-SSELDQEFLSNN 61
S+ D CL L H S V+SL+ + G + + D WD ++ +S F S
Sbjct: 181 SLQDRSCLAVLTAHYSAVTSLSFSEDGHTMLSSGRDKICIVWDLRSYETSRTVPVFESVE 240
Query: 62 NIVAVGKGAVKSLVVLADKL-FSAHQDHKI-RVWK 94
V + + +L V L F D I RVW+
Sbjct: 241 ASVLLPEEPALALGVKNSGLHFLTAGDQGILRVWE 275
Score = 57 (25.1 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 23/83 (27%), Positives = 34/83 (40%)
Query: 18 HNSYVSSLAL--AGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAVKSLV 75
H + V+S+A L TG D VR WD F + +V +
Sbjct: 108 HTAPVASMAFDATSTLLATGGCDGAVRVWDIVQHYGT--HHFRGSPGVVHLVAFHPDPTR 165
Query: 76 VLADKLFSAHQDHKIRVWKINNQ 98
+L LFS+ D IRVW + ++
Sbjct: 166 LL---LFSSAVDTSIRVWSLQDR 185
>UNIPROTKB|O43660 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9606 "Homo
sapiens" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0004871 "signal transducer activity" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0003714 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871
EMBL:CH471056 GO:GO:0000398 GO:GO:0071013 CTD:5356
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF044333 EMBL:AK002108 EMBL:BC020786 EMBL:BC106004
IPI:IPI00002624 IPI:IPI00382756 RefSeq:NP_001188493.1
RefSeq:NP_002660.1 UniGene:Hs.249996 ProteinModelPortal:O43660
SMR:O43660 IntAct:O43660 MINT:MINT-2999551 STRING:O43660
PhosphoSite:O43660 PaxDb:O43660 PRIDE:O43660
Ensembl:ENST00000302078 Ensembl:ENST00000499023 GeneID:5356
KEGG:hsa:5356 UCSC:uc003iny.3 UCSC:uc003inz.3 GeneCards:GC04M155457
HGNC:HGNC:9089 HPA:HPA035932 MIM:605961 neXtProt:NX_O43660
PharmGKB:PA33416 PhylomeDB:O43660 GenomeRNAi:5356 NextBio:20762
ArrayExpress:O43660 Bgee:O43660 CleanEx:HS_PLRG1
Genevestigator:O43660 GermOnline:ENSG00000171566 Uniprot:O43660
Length = 514
Score = 179 (68.1 bits), Expect = 7.7e-11, P = 7.7e-11
Identities = 76/307 (24%), Positives = 135/307 (43%)
Query: 15 LKGHNSYVSSLAL--AGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAVK 72
+ GH +V +A+ ++ TGS+D ++ WD S +L LS ++ +G +
Sbjct: 200 ISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLA--SGKLK---LSLTGHISTVRGVIV 254
Query: 73 SLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLG-DRAIKLLMPKNHVQIR 131
S + LFS +D +++ W + + + L+ + L I +L+ +
Sbjct: 255 S--TRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTA 312
Query: 132 RH---KTCTWVH----HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAH 184
R +T VH H +AV+ + E + + S D TI++W K ++TN H
Sbjct: 313 RIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTN-H 371
Query: 185 DDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSV 244
++ AV L + + IK W+ G S + L HN+ IN L ++ DG V
Sbjct: 372 KKSVRAVVLHPRHYTFASGSPDNIKQWKFPDG----SFIQNLSGHNAIINTLTVNSDG-V 426
Query: 245 LYSGACDRSIIVWEKEEDDGNILV-----VGALRGHTKSILCMAVVSDL-VCSGSADKTI 298
L SGA + ++ +W+ V G+L + C S+ + + ADKTI
Sbjct: 427 LVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIFACAFDQSESRLLTAEADKTI 486
Query: 299 RIWRGID 305
+++R D
Sbjct: 487 KVYREDD 493
>UNIPROTKB|F1SU35 [details] [associations]
symbol:CIAO1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0097361 "CIA complex" evidence=IEA] [GO:0071817 "MMXD
complex" evidence=IEA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0071817 OMA:SWKCVCT
GeneTree:ENSGT00700000104486 EMBL:CU896688
Ensembl:ENSSSCT00000008907 Uniprot:F1SU35
Length = 337
Score = 175 (66.7 bits), Expect = 7.8e-11, P = 7.8e-11
Identities = 61/218 (27%), Positives = 99/218 (45%)
Query: 148 LALTKDETLLYSVSWDRTIKIW-RTSD-FKCLESITNAHDDAINAVALSDDGDVYTGSA- 204
LA TLL S DR+++IW R D + C + H + VA S G+ Y SA
Sbjct: 22 LAWNPAGTLLASCGGDRSVRIWGREGDSWICKSVLCEGHQRTVRKVAWSPCGN-YLASAS 80
Query: 205 -DKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEK--EE 261
D +W+++ + V LE H + + ++A + G++L + + D+S+ VWE E
Sbjct: 81 FDATTCIWKKNKDD--FECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEGTVEN 138
Query: 262 DDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPV 321
+ V K +L +L+ S S D T++++R + ++ C A LEGH V
Sbjct: 139 QPSDPTRVPYKPQSMKKVLWHPS-QELLASASYDDTVKLYREEEDDWVCCATLEGHESTV 197
Query: 322 KCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQISFP 359
LA D S CS D +++W+ P
Sbjct: 198 WSLAF-------DPSGQRLASCSD--DRTVRIWRQYLP 226
>ASPGD|ASPL0000008575 [details] [associations]
symbol:AN6217 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:BN001301 EMBL:AACD01000105 KO:K03361
RefSeq:XP_663821.1 ProteinModelPortal:Q5AZR3 STRING:Q5AZR3
EnsemblFungi:CADANIAT00006785 GeneID:2870808 KEGG:ani:AN6217.2
HOGENOM:HOG000164406 OMA:SISEGRC OrthoDB:EOG4XWK5Z Uniprot:Q5AZR3
Length = 618
Score = 180 (68.4 bits), Expect = 8.2e-11, P = 8.2e-11
Identities = 55/197 (27%), Positives = 88/197 (44%)
Query: 149 ALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSADKKI 208
A+ + +L S DR +++W + + + + H + + +SD +GS D +
Sbjct: 297 AMVPWDNILVSGGCDREVRVWNMATGESIY-LLRGHTSTVRCLKMSDKNTAISGSRDTTL 355
Query: 209 KVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILV 268
++W G + LV H + + LA+ G ++ SG+ D + VW E G L
Sbjct: 356 RIWDLRTGTCRSVLVG----HQASVRCLAVH--GDIVVSGSYDTTARVWSISE--GRFL- 406
Query: 269 VGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNY-TCLAVLEGHRGPVKCLAAA 327
AL GH I +A + +GS D ++RIW D N C A+L+GH V L +
Sbjct: 407 -RALSGHFSQIYAIAFDGRRIATGSLDTSVRIW---DPNTGQCHAILQGHTSLVGQLQMS 462
Query: 328 IDNDRCDSSDTSYLVCS 344
D SD S V S
Sbjct: 463 GDTLVTGGSDGSVRVWS 479
Score = 176 (67.0 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 69/287 (24%), Positives = 132/287 (45%)
Query: 22 VSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAVKSLVVLADKL 81
V+SL L K++ + ++ +D N E +Q+ L + +G V ++V + L
Sbjct: 256 VTSLHLTPKYIVASLDNAKIHVYDTN---GE-NQKTLEGH---VMG---VWAMVPWDNIL 305
Query: 82 FSAHQDHKIRVWKINNQEPDH--QKYTRLATLPTLGDRAIKLLMPKN---HVQIRRHKTC 136
S D ++RVW + E + + +T + D+ + ++ + R TC
Sbjct: 306 VSGGCDREVRVWNMATGESIYLLRGHTSTVRCLKMSDKNTAISGSRDTTLRIWDLRTGTC 365
Query: 137 --TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALS 194
V H +V LA+ D ++ S S+D T ++W S+ + L +++ H I A+A
Sbjct: 366 RSVLVGHQASVRCLAVHGD--IVVSGSYDTTARVWSISEGRFLRALSG-HFSQIYAIAF- 421
Query: 195 DDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSI 254
D + TGS D +++W + G + H+ +L+ H S + L +S G L +G D S+
Sbjct: 422 DGRRIATGSLDTSVRIWDPNTG-QCHA---ILQGHTSLVGQLQMS--GDTLVTGGSDGSV 475
Query: 255 IVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIW 301
VW + + L H S+ + ++ + SG +D +++W
Sbjct: 476 RVWSLTR----MAPIHRLAAHDNSVTSLQFDNNRIVSGGSDGRVKVW 518
Score = 169 (64.5 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 45/117 (38%), Positives = 61/117 (52%)
Query: 243 SVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVS-DLVCSGSADKTIRIW 301
++L SG CDR + VW + L LRGHT ++ C+ + + SGS D T+RIW
Sbjct: 303 NILVSGGCDREVRVWNMATGESIYL----LRGHTSTVRCLKMSDKNTAISGSRDTTLRIW 358
Query: 302 RGID-RNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQIS 357
D R TC +VL GH+ V+CLA + D +V SGS D +VW IS
Sbjct: 359 ---DLRTGTCRSVLVGHQASVRCLA--VHGD---------IVVSGSYDTTARVWSIS 401
Score = 168 (64.2 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 45/159 (28%), Positives = 76/159 (47%)
Query: 196 DGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSII 255
D + +G D++++VW + G + +L H S + L +S D + SG+ D ++
Sbjct: 302 DNILVSGGCDREVRVWNMATGES----IYLLRGHTSTVRCLKMS-DKNTAISGSRDTTLR 356
Query: 256 VWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLE 315
+W+ ++VG H S+ C+AV D+V SGS D T R+W + + L L
Sbjct: 357 IWDLRTGTCRSVLVG----HQASVRCLAVHGDIVVSGSYDTTARVWSISEGRF--LRALS 410
Query: 316 GHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVW 354
GH + A A D R + +GSLD +++W
Sbjct: 411 GHFSQI--YAIAFDGRR---------IATGSLDTSVRIW 438
Score = 167 (63.8 bits), Expect = 8.7e-11, Sum P(2) = 8.7e-11
Identities = 59/214 (27%), Positives = 97/214 (45%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H V L ++ T + S S D T++IW C S+ H ++ +A+ D V
Sbjct: 331 HTSTVRCLKMSDKNTAI-SGSRDTTLRIWDLRTGTC-RSVLVGHQASVRCLAVHGD-IVV 387
Query: 201 TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKE 260
+GS D +VW S G + L H S I A+A DG + +G+ D S+ +W+
Sbjct: 388 SGSYDTTARVWSISEGR----FLRALSGHFSQIYAIAF--DGRRIATGSLDTSVRIWDP- 440
Query: 261 EDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGP 320
+ G + L+GHT + + + D + +G +D ++R+W + T +A + HR
Sbjct: 441 -NTGQCHAI--LQGHTSLVGQLQMSGDTLVTGGSDGSVRVW-----SLTRMAPI--HR-- 488
Query: 321 VKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVW 354
AA DN + + SG D +KVW
Sbjct: 489 ----LAAHDNSVTSLQFDNNRIVSGGSDGRVKVW 518
Score = 121 (47.7 bits), Expect = 0.00030, P = 0.00030
Identities = 64/273 (23%), Positives = 117/273 (42%)
Query: 15 LKGHNSYVSSLALAGK-FLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVG-KGAVK 72
L+GH S V L ++ K +GS D +R WD T + V VG + +V+
Sbjct: 328 LRGHTSTVRCLKMSDKNTAISGSRDTTLRIWDLRTGTCRS----------VLVGHQASVR 377
Query: 73 SLVVLADKLFSAHQDHKIRVWKINNQE-----PDHQKYTRLATLPTLGDRAIKLLMPKNH 127
L V D + S D RVW I+ H ++++ + G R I
Sbjct: 378 CLAVHGDIVVSGSYDTTARVWSISEGRFLRALSGH--FSQIYAIAFDG-RRIATGSLDTS 434
Query: 128 VQIRRHKT--CTWV--HHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA 183
V+I T C + H V L ++ D TL+ S D ++++W + + + A
Sbjct: 435 VRIWDPNTGQCHAILQGHTSLVGQLQMSGD-TLVTGGS-DGSVRVWSLTRMAPIHRLA-A 491
Query: 184 HDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGS 243
HD+++ ++ D+ + +G +D ++KVW G L+ L + + + + +
Sbjct: 492 HDNSVTSLQF-DNNRIVSGGSDGRVKVWCLRTGQ----LLRELSTPSDTVWRVTFEEEKA 546
Query: 244 VLYSGACDRSII-VWE----KEEDDGNILVVGA 271
V+ S R+++ VW E+ + + +GA
Sbjct: 547 VIMSSRSGRTVMEVWSFSPPPEDTEFDAATIGA 579
Score = 56 (24.8 bits), Expect = 8.7e-11, Sum P(2) = 8.7e-11
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 14 TLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSS 51
TL+GH V ++ L +G D EVR W+ T S
Sbjct: 287 TLEGHVMGVWAMVPWDNILVSGGCDREVRVWNMATGES 324
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 175 (66.7 bits), Expect = 8.5e-11, P = 8.5e-11
Identities = 59/224 (26%), Positives = 100/224 (44%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD-- 198
H AV T D + +++ S D+T+ W + + H + +N+V S G
Sbjct: 97 HSGAVMEAHFTPDGSHIFTCSTDKTLAFWDIATGQRQRRF-KGHGNFVNSVQGSRRGQQL 155
Query: 199 VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWE 258
+ +GS D+ IK+W KKH+ LE + A+ G + SG D + +W+
Sbjct: 156 LCSGSDDRTIKIW---DARKKHA-AHTLESPFQ-VTAVCFGDTGEQVISGGIDNEVKIWD 210
Query: 259 KEEDDGNILVVGALRGHTKSILCMAVV--SDLVCSGSADKTIRIW--RGIDRNYTCLAVL 314
+ V+ LRGH+ +I M++ D + + + D T+R+W R C+ V
Sbjct: 211 IRKQ----AVLHHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVWDVRPYAPGERCVKVF 266
Query: 315 EGHRGPV-KCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQIS 357
+GH+ K L RC S S + SGS D + +W ++
Sbjct: 267 QGHQHNFEKNLL------RCAWSPGSDKITSGSADRHVYIWDVN 304
Score = 173 (66.0 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 61/212 (28%), Positives = 97/212 (45%)
Query: 152 KDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD-VYTGSADKKIKV 210
+ + LL S S DRTIKIW ++ + + AV D G+ V +G D ++K+
Sbjct: 151 RGQQLLCSGSDDRTIKIWDARKKHAAHTLESPFQ--VTAVCFGDTGEQVISGGIDNEVKI 208
Query: 211 WRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVG 270
W +K +++ L H+ I ++LS +G + + A D ++ VW+ V
Sbjct: 209 W----DIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVWDVRPYAPGERCVK 264
Query: 271 ALRGHT----KSIL-CM-AVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCL 324
+GH K++L C + SD + SGSAD+ + IW R L L GH G V +
Sbjct: 265 VFQGHQHNFEKNLLRCAWSPGSDKITSGSADRHVYIWDVNTRRI--LYKLPGHNGSVNAV 322
Query: 325 AAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
D S L+ SGS D + + +I
Sbjct: 323 ---------DFSPKEPLILSGSSDKTLYLGEI 345
Score = 154 (59.3 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 58/264 (21%), Positives = 115/264 (43%)
Query: 15 LKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAVK 72
+ GH+ V G ++T S+D + WD T + + F + N V +G+ +
Sbjct: 94 MSGHSGAVMEAHFTPDGSHIFTCSTDKTLAFWDIAT--GQRQRRFKGHGNFVNSVQGSRR 151
Query: 73 SLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYTRL-ATLPTLGDRAIKLLMP--KNHVQ 129
+L S D I++W + H + T GD +++ N V+
Sbjct: 152 GQQLLC----SGSDDRTIKIWDARKKHAAHTLESPFQVTAVCFGDTGEQVISGGIDNEVK 207
Query: 130 IRRHKTCTWVHHV----DAVSALALTKDETLLYSVSWDRTIKIWRTSDF----KCLESIT 181
I + +HH+ D ++ ++L+ + + + + D T+++W + +C++
Sbjct: 208 IWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVWDVRPYAPGERCVKVFQ 267
Query: 182 -NAHDDAINAV--ALSDDGDVYT-GSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALA 237
+ H+ N + A S D T GSAD+ + +W N + L L HN +NA+
Sbjct: 268 GHQHNFEKNLLRCAWSPGSDKITSGSADRHVYIW---DVNTRRILYK-LPGHNGSVNAVD 323
Query: 238 LSCDGSVLYSGACDRSIIVWEKEE 261
S ++ SG+ D+++ + E +E
Sbjct: 324 FSPKEPLILSGSSDKTLYLGEIDE 347
Score = 116 (45.9 bits), Expect = 0.00044, P = 0.00044
Identities = 47/211 (22%), Positives = 89/211 (42%)
Query: 151 TKDETLLYSVSWDRTIK---IWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSA-DK 206
+K++ + Y+ + D+ + + RTS+ + H+ I +G++ S D+
Sbjct: 19 SKNDLMAYT-NRDKALLESGVRRTSNLQAPIMQLEGHEGEIFTAEFHPEGELLLSSGFDR 77
Query: 207 KIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNI 266
+I +W+ + V + H+ + + DGS +++ + D+++ W+
Sbjct: 78 QIYIWQVYEDCEN---VMAMSGHSGAVMEAHFTPDGSHIFTCSTDKTLAFWDIATGQRQR 134
Query: 267 LVVGALRGH-TKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLA 325
G G+ S+ L+CSGS D+TI+IW R LE P + A
Sbjct: 135 RFKG--HGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDA--RKKHAAHTLES---PFQVTA 187
Query: 326 AAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
DT V SG +D ++K+W I
Sbjct: 188 VCF-------GDTGEQVISGGIDNEVKIWDI 211
>DICTYBASE|DDB_G0295761 [details] [associations]
symbol:nle1 "putative notchless" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0295761 InterPro:IPR001632
GO:GO:0005634 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
KO:K14855 OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154
RefSeq:XP_002649195.1 ProteinModelPortal:C7FZX3
EnsemblProtists:DDB0252725 GeneID:8616962 KEGG:ddi:DDB_G0295761
Uniprot:C7FZX3
Length = 507
Score = 178 (67.7 bits), Expect = 9.7e-11, P = 9.7e-11
Identities = 85/329 (25%), Positives = 144/329 (43%)
Query: 11 CLTTLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGK 68
C +++ GH V + A + GK + D VR WD ++S + N V
Sbjct: 132 CASSMSGHTEAVLNCAFSPDGKGFVSVGGDTTVRIWDI--YTSTPTHTLKGHTNWVLQVA 189
Query: 69 GAVKSLVVLADKLFSAHQDHKIRVW------KINNQEPDHQKY-TRLATLPT-LGDRAIK 120
+ S K+ +A + IR+W ++ + H K+ T L+ P L + ++
Sbjct: 190 WSPDS-----KKIATAGMEGDIRIWCPQTGKQLGSTLKGHTKFITGLSWEPFHLNPKCVR 244
Query: 121 LLMPKNHVQIRRHKT--C----TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDF 174
L IR T C + H +V+ L E L+YS S DRT++++ T+D
Sbjct: 245 LASSSKDSTIRIWDTESCKNLMSLSGHTMSVTCLKWG-GEGLIYSGSQDRTVRVFNTTDG 303
Query: 175 KCLESITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGIN 234
+ L + + H +N +AL+ D + TGS D K + ++ +L ER+N +
Sbjct: 304 R-LVRVLDGHAHWVNTLALNTDYVLRTGSYDHTGKEYDTLEEAQRVAL----ERYND-VK 357
Query: 235 ALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSG 292
A + + +L SG+ D ++I+W +I L GH + I ++ D S
Sbjct: 358 AKSKGME--ILISGSDDFTVIMWNPSVTKTSI---SRLTGHQQLINLVSFSPDGRYFASA 412
Query: 293 SADKTIRIWRGIDRNYTCLAVLEGHRGPV 321
S DK+I++W G + L GH G V
Sbjct: 413 SFDKSIKLWDGQSGKF--LGNFRGHVGAV 439
Score = 154 (59.3 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 76/308 (24%), Positives = 124/308 (40%)
Query: 13 TTLKGHNSYVSSLA-----LAGKF--LYTGSSDNEVRSWDCNTFSSELDQEFLSNNNI-V 64
+TLKGH +++ L+ L K L + S D+ +R WD + + + LS + + V
Sbjct: 219 STLKGHTKFITGLSWEPFHLNPKCVRLASSSKDSTIRIWDTESCKNLMS---LSGHTMSV 275
Query: 65 AVGKGAVKSLVVLADKLFSAHQDHKIRVWKINNQE-----PDHQKYTRLATLPTLGDRAI 119
K + L+ +S QD +RV+ + H + L T D +
Sbjct: 276 TCLKWGGEGLI------YSGSQDRTVRVFNTTDGRLVRVLDGHAHWVNTLALNT--DYVL 327
Query: 120 KLLMPKNHVQIRRHKTCTWVHHVDAV---SALALTKDETLLYSVSWDRTIKIWRTSDFKC 176
+ +H + + T V A +K +L S S D T+ +W S K
Sbjct: 328 RT-GSYDHTG-KEYDTLEEAQRVALERYNDVKAKSKGMEILISGSDDFTVIMWNPSVTKT 385
Query: 177 LESITNAHDDAINAVALSDDGDVY-TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINA 235
S H IN V+ S DG + + S DK IK+W G + H +
Sbjct: 386 SISRLTGHQQLINLVSFSPDGRYFASASFDKSIKLWDGQSGK----FLGNFRGHVGAVYQ 441
Query: 236 LALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCM--AVVSDLVCSGS 293
+ S D L SG+ D ++ +W+ + + L GH + + + D V SGS
Sbjct: 442 VCWSSDSRYLVSGSKDSTLKIWDIKTKK----MEKELPGHADEVYTVDWSPDGDRVASGS 497
Query: 294 ADKTIRIW 301
D+ +RIW
Sbjct: 498 KDRLLRIW 505
Score = 134 (52.2 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 53/188 (28%), Positives = 83/188 (44%)
Query: 173 DFKCLESITNAHDDAINAVALSDDGD--VYTGSADKKIKVWRRSPGNKKHSLVDVLERHN 230
++ LE + N V G + +GS D + +W +P K S + L H
Sbjct: 338 EYDTLEEAQRVALERYNDVKAKSKGMEILISGSDDFTVIMW--NPSVTKTS-ISRLTGHQ 394
Query: 231 SGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSI--LCMAVVSDL 288
IN ++ S DG S + D+SI +W+ + G L G RGH ++ +C + S
Sbjct: 395 QLINLVSFSPDGRYFASASFDKSIKLWDGQS--GKFL--GNFRGHVGAVYQVCWSSDSRY 450
Query: 289 VCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLD 348
+ SGS D T++IW I + L GH V + + D DR V SGS D
Sbjct: 451 LVSGSKDSTLKIW-DI-KTKKMEKELPGHADEVYTVDWSPDGDR---------VASGSKD 499
Query: 349 CDIKVWQI 356
+++W +
Sbjct: 500 RLLRIWTV 507
Score = 128 (50.1 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 57/217 (26%), Positives = 95/217 (43%)
Query: 5 SVVDHHCLTTLKGHNSYVSSLALAGKF-LYTGSSDNEVRSWDCNTFSSELDQEFLSNNNI 63
+ D + L GH +V++LAL + L TGS D+ + +D + + E N++
Sbjct: 299 NTTDGRLVRVLDGHAHWVNTLALNTDYVLRTGSYDHTGKEYDTLEEAQRVALE--RYNDV 356
Query: 64 VAVGKGAVKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLG-------- 115
A KG ++ L+ +D + + I+ HQ+ L + G
Sbjct: 357 KAKSKG-MEILISGSDDFTVIMWNPSVTKTSISRLT-GHQQLINLVSFSPDGRYFASASF 414
Query: 116 DRAIKLLMPKNHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFK 175
D++IKL ++ + + HV AV + + D L S S D T+KIW K
Sbjct: 415 DKSIKLWDGQSGKFLGNFRG-----HVGAVYQVCWSSDSRYLVSGSKDSTLKIWDIKTKK 469
Query: 176 CLESITNAHDDAINAVALSDDGD-VYTGSADKKIKVW 211
+E H D + V S DGD V +GS D+ +++W
Sbjct: 470 -MEKELPGHADEVYTVDWSPDGDRVASGSKDRLLRIW 505
>UNIPROTKB|E1BVN5 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
CTD:5356 GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK
EMBL:AADN02016546 IPI:IPI00576149 RefSeq:XP_420368.2
UniGene:Gga.9982 ProteinModelPortal:E1BVN5
Ensembl:ENSGALT00000015067 GeneID:422401 KEGG:gga:422401
NextBio:20825038 Uniprot:E1BVN5
Length = 516
Score = 178 (67.7 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 75/307 (24%), Positives = 136/307 (44%)
Query: 15 LKGHNSYVSSLAL--AGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAVK 72
+ GH +V +A+ ++ TGS+D ++ WD S +L LS ++ +G +
Sbjct: 202 ISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLA--SGKLK---LSLTGHISTVRGVIV 256
Query: 73 SLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLG-DRAIKLLMPKNHVQIR 131
S + LFS +D +++ W + + + L+ + L I +L+ +
Sbjct: 257 S--ARSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTA 314
Query: 132 RH---KTCTWVH----HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAH 184
R +T VH H +AV+ + E + + S D TI++W K ++TN H
Sbjct: 315 RIWDVRTKASVHTLSGHTNAVATVKCQAAEPQVVTGSHDTTIRLWDLVAGKTRVTLTN-H 373
Query: 185 DDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSV 244
++ AV L + + IK W+ GN + L HN+ IN L ++ DG V
Sbjct: 374 KKSVRAVILHPRHYTFASGSPDNIKQWKFPDGN----FIQNLSGHNAIINTLTVNSDG-V 428
Query: 245 LYSGACDRSIIVWEKEEDDGNILV-----VGALRGHTKSILCMAVVSDL-VCSGSADKTI 298
L SGA + ++ +W+ V G+L + C+ S+ + + ADKTI
Sbjct: 429 LVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIFACVFDQSESRLLTAEADKTI 488
Query: 299 RIWRGID 305
++++ D
Sbjct: 489 KVYKEDD 495
>MGI|MGI:1306796 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA;TAS]
[GO:0006309 "apoptotic DNA fragmentation" evidence=IGI] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006917 "induction of
apoptosis" evidence=ISO] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process"
evidence=ISO;IGI;IMP] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IMP]
[GO:0007420 "brain development" evidence=IMP] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=ISO] [GO:0010659
"cardiac muscle cell apoptotic process" evidence=ISO] [GO:0010952
"positive regulation of peptidase activity" evidence=IPI]
[GO:0016505 "apoptotic protease activator activity" evidence=IPI]
[GO:0030900 "forebrain development" evidence=IMP] [GO:0031072 "heat
shock protein binding" evidence=ISO] [GO:0042802 "identical protein
binding" evidence=ISO;IPI] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0043293 "apoptosome" evidence=ISO]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0051402 "neuron apoptotic
process" evidence=IGI] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR000767 InterPro:IPR001315
InterPro:IPR001680 InterPro:IPR002182 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00619 Pfam:PF00931 PRINTS:PR00364
PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294 SMART:SM00320
EMBL:AF064071 MGI:MGI:1306796 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005794 GO:GO:0006952 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900 GO:GO:0051402
GO:GO:0043531 GO:GO:0006919 GO:GO:0001843 GO:GO:0006309
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OrthoDB:EOG43TZTP GO:GO:0043293 GO:GO:0016505 CTD:317
HOVERGEN:HBG018730 KO:K02084 OMA:KVCKNSA InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:BC131683 EMBL:BC131684 IPI:IPI00135366
IPI:IPI00654978 RefSeq:NP_001036023.1 RefSeq:NP_033814.2
UniGene:Mm.220289 PDB:3SFZ PDB:3SHF PDBsum:3SFZ PDBsum:3SHF
ProteinModelPortal:O88879 SMR:O88879 IntAct:O88879 STRING:O88879
PhosphoSite:O88879 PaxDb:O88879 PRIDE:O88879
Ensembl:ENSMUST00000020157 Ensembl:ENSMUST00000159110 GeneID:11783
KEGG:mmu:11783 GeneTree:ENSGT00700000104017 InParanoid:A2RRK8
ChiTaRS:APAF1 NextBio:279591 Bgee:O88879 CleanEx:MM_APAF1
Genevestigator:O88879 GermOnline:ENSMUSG00000019979 Uniprot:O88879
Length = 1249
Score = 183 (69.5 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 90/363 (24%), Positives = 147/363 (40%)
Query: 16 KGHNSYVSSLALA--GKFLYTGSSDNEVRSWD----CNTFSSELDQEF---LSNNNIVAV 66
+GH S+V + + G T S D +R W+ C + L QE N + +
Sbjct: 879 RGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVL 938
Query: 67 GKGAVKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLGDRAIKLL-MPK 125
++ L ++A K + +V P H +Y D AIK++ +P
Sbjct: 939 AVDNIRGLQLIAGKTGQIDYLPEAQV-SCCCLSP-HLEYVAFGD----EDGAIKIIELPN 992
Query: 126 NHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIW--RTSDFKCLESITNA 183
N V + V H AV + T D L S S D I++W +T D+ L+ A
Sbjct: 993 NRV------FSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQ----A 1042
Query: 184 HDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGS 243
H + + L D + + S D +KVW G + H + + A+S D +
Sbjct: 1043 HQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFTC----HQGTVLSCAISSDAT 1098
Query: 244 VLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIW 301
S + D++ +W + + + L+GH + C A D L+ +G + IRIW
Sbjct: 1099 KFSSTSADKTAKIWSFDL----LSPLHELKGHNGCVRCSAFSLDGILLATGDDNGEIRIW 1154
Query: 302 RGIDRN--YTC--LAVLEG---HRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVW 354
D ++C ++V EG H G V D C S D+ LV +G +K W
Sbjct: 1155 NVSDGQLLHSCAPISVEEGTATHGGWV--------TDVCFSPDSKTLVSAGGY---LKWW 1203
Query: 355 QIS 357
++
Sbjct: 1204 NVA 1206
Score = 164 (62.8 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 58/210 (27%), Positives = 95/210 (45%)
Query: 99 EPDHQKYTRLATLPTL--GDRAIKLLMPKNHVQIRRHKTCTWVHHVDAVSALALTKDETL 156
EP+ + R A L GD L N I+ H DAV ++D
Sbjct: 570 EPETSEVYRQAKLQAKQEGDTGRLYLEWINKKTIKNLSRLVVRPHTDAVYHACFSQDGQR 629
Query: 157 LYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALS-DDGDVYTGSADKKIKVWRRSP 215
+ S D+T+++++ + L I AH+D + A S DD + T SADKK+K+W +
Sbjct: 630 IASCGADKTLQVFKAETGEKLLDI-KAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSAT 688
Query: 216 GNKKHSLVDVLERHNSGINALALSCDGS--VLYSGACDRSIIVWEKEEDDGNILVVGALR 273
G LV + H+ +N + + +L +G+ D + +W+ + + +
Sbjct: 689 GK----LVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECR----NTMF 740
Query: 274 GHTKSIL-CMAVVSD-LVCSGSADKTIRIW 301
GHT S+ C D L+ S SAD T+R+W
Sbjct: 741 GHTNSVNHCRFSPDDELLASCSADGTLRLW 770
Score = 122 (48.0 bits), Expect = 0.00055, P = 0.00055
Identities = 43/183 (23%), Positives = 79/183 (43%)
Query: 180 ITNAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALAL 238
+ H DA+ S DG + + ADK ++V++ G K L+D+ + H + A
Sbjct: 610 VVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEK---LLDI-KAHEDEVLCCAF 665
Query: 239 SCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD----LVCSGSA 294
S D S + + + D+ + +W+ G + V H++ + C + L+ +GS
Sbjct: 666 SSDDSYIATCSADKKVKIWDSAT--GKL--VHTYDEHSEQVNCCHFTNKSNHLLLATGSN 721
Query: 295 DKTIRIWRGIDRNYT-CLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKV 353
D +++W D N C + GH V + C S L+ S S D +++
Sbjct: 722 DFFLKLW---DLNQKECRNTMFGHTNSV---------NHCRFSPDDELLASCSADGTLRL 769
Query: 354 WQI 356
W +
Sbjct: 770 WDV 772
>UNIPROTKB|Q9HAV0 [details] [associations]
symbol:GNB4 "Guanine nucleotide-binding protein subunit
beta-4" species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0006112 "energy reserve metabolic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
Reactome:REACT_111102 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006112 GO:GO:0004871
GO:GO:0071377 PRINTS:PR00319 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 HPA:HPA040736 EMBL:AF300648 EMBL:AK001890
EMBL:BC000873 IPI:IPI00012451 RefSeq:NP_067642.1 UniGene:Hs.173030
ProteinModelPortal:Q9HAV0 SMR:Q9HAV0 IntAct:Q9HAV0
MINT:MINT-1135986 STRING:Q9HAV0 PhosphoSite:Q9HAV0 DMDM:22256759
OGP:Q9HAV0 PeptideAtlas:Q9HAV0 PRIDE:Q9HAV0 DNASU:59345
Ensembl:ENST00000232564 Ensembl:ENST00000468623 GeneID:59345
KEGG:hsa:59345 UCSC:uc003fjv.4 CTD:59345 GeneCards:GC03M179113
HGNC:HGNC:20731 HPA:CAB018383 HPA:CAB018737 MIM:610863
neXtProt:NX_Q9HAV0 PharmGKB:PA134864200 InParanoid:Q9HAV0 KO:K04538
OMA:GACDATS PhylomeDB:Q9HAV0 GenomeRNAi:59345 NextBio:65246
ArrayExpress:Q9HAV0 Bgee:Q9HAV0 CleanEx:HS_GNB4
Genevestigator:Q9HAV0 GermOnline:ENSG00000114450 Uniprot:Q9HAV0
Length = 340
Score = 173 (66.0 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 76/304 (25%), Positives = 130/304 (42%)
Query: 14 TLKGHNS--YVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAV 71
TL+GH + Y + L + S D ++ WD T ++++ L ++ ++
Sbjct: 50 TLRGHLAKIYAMHWGYDSRLLVSASQDGKLIIWDSYT-TNKMHAIPLRSSWVMTCAYAPS 108
Query: 72 KSLVVLA--DKLFSAHQDHKIRVW--KINNQEPDHQKYTRLATLPTLGDRAIKLLMPKNH 127
+ V D + S + + K R +++ + P H Y L+ L D I
Sbjct: 109 GNYVACGGLDNICSIY-NLKTREGNVRVSRELPGHTGY--LSCCRFLDDSQIVTSSGDTT 165
Query: 128 VQI----RRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA 183
+ +T T+ H V +L+L+ D S + D + K+W D C +S T
Sbjct: 166 CALWDIETAQQTTTFTGHSGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQSFTG- 224
Query: 184 HDDAINAVALSDDGDVY-TGSADKKIKVWRRSPGNKKHSLVDVLERHNS---GINALALS 239
H INAV+ +G + TGS D +++ + +L H++ GI ++A S
Sbjct: 225 HVSDINAVSFFPNGYAFATGSDDATCRLFDLRADQEL-----LLYSHDNIICGITSVAFS 279
Query: 240 CDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKT 297
G +L +G D + VW+ + D G L GH + C+ V D V +GS D
Sbjct: 280 KSGRLLLAGYDDFNCNVWDTLKGDR----AGVLAGHDNRVSCLGVTDDGMAVATGSWDSF 335
Query: 298 IRIW 301
+RIW
Sbjct: 336 LRIW 339
Score = 114 (45.2 bits), Expect = 0.00070, P = 0.00070
Identities = 40/157 (25%), Positives = 63/157 (40%)
Query: 201 TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKE 260
+ S D K+ +W NK H++ +S + A + G+ + G D ++ +
Sbjct: 72 SASQDGKLIIWDSYTTNKMHAI----PLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLK 127
Query: 261 EDDGNILVVGALRGHTKSILCMAVVSDL-VCSGSADKTIRIWRGIDRNYTCLAVLEGHRG 319
+GN+ V L GHT + C + D + + S D T +W T GH G
Sbjct: 128 TREGNVRVSRELPGHTGYLSCCRFLDDSQIVTSSGDTTCALWDIETAQQT--TTFTGHSG 185
Query: 320 PVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
V L+ S D V SG+ D K+W I
Sbjct: 186 DVMSLSL--------SPDMRTFV-SGACDASSKLWDI 213
>TAIR|locus:2157762 [details] [associations]
symbol:AT5G50230 "AT5G50230" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007275 "multicellular
organismal development" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:BT011244 EMBL:BT020329 IPI:IPI00518229
RefSeq:NP_199834.2 UniGene:At.29744 ProteinModelPortal:Q6NNP0
SMR:Q6NNP0 PRIDE:Q6NNP0 EnsemblPlants:AT5G50230.1 GeneID:835088
KEGG:ath:AT5G50230 TAIR:At5g50230 InParanoid:Q6NNP0
PhylomeDB:Q6NNP0 ProtClustDB:CLSN2681670 Genevestigator:Q6NNP0
Uniprot:Q6NNP0
Length = 509
Score = 177 (67.4 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 64/278 (23%), Positives = 126/278 (45%)
Query: 81 LFSAHQDHKIRVWKINNQEPDHQKYTRLATL----PTLGDRAIKLLMPKNHVQI------ 130
LF+ QD +++W N+ Y L + T ++++ N++ +
Sbjct: 240 LFTGGQDRAVKMWDTNSGTLIKSLYGSLGNILDMAVTHDNKSVIAATSSNNLFVWDVSSG 299
Query: 131 RRHKTCTWVHHVDAVSALALTKDETL-LYSVSWDRTIKIWRTSDFKCLESITNAHDDAIN 189
R T T H D V A+ ++K + + S ++DRTIK+W C ++ + N
Sbjct: 300 RVRHTLTG--HTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHKGYCTNTVLFTSN--CN 355
Query: 190 AVALSDDG-DVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSG 248
A+ LS DG V++G D +++W G L+ + H+S + +++LS +G+ + +
Sbjct: 356 AICLSIDGLTVFSGHMDGNLRLWDIQTGK----LLSEVAGHSSAVTSVSLSRNGNRILTS 411
Query: 249 ACDRSIIVWEKE--EDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDR 306
D V++ E G + G S C++ D V +GSAD ++ +W + +
Sbjct: 412 GRDNVHNVFDTRTLEICGTLRASGNRLASNWSRSCISPDDDYVAAGSADGSVHVW-SLSK 470
Query: 307 NYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCS 344
+++L+ P+ C + + S+D + VC+
Sbjct: 471 G-NIVSILKEQTSPILCCSWSGIGKPLASADKNGYVCT 507
Score = 130 (50.8 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 52/216 (24%), Positives = 99/216 (45%)
Query: 148 LALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSA--D 205
+A+T D + + + + +W S + ++T H D + AV +S + SA D
Sbjct: 273 MAVTHDNKSVIAATSSNNLFVWDVSSGRVRHTLTG-HTDKVCAVDVSKFSSRHVVSAAYD 331
Query: 206 KKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGN 265
+ IK+W G ++++ S NA+ LS DG ++SG D ++ +W+ + G
Sbjct: 332 RTIKLWDLHKGYCTNTVL-----FTSNCNAICLSIDGLTVFSGHMDGNLRLWDIQT--GK 384
Query: 266 ILVVGALRGHTKSILCMAVV--SDLVCSGSADKTIRIW--RGIDRNYTCLAVLEGHRGPV 321
+L + GH+ ++ +++ + + + D ++ R ++ T A G+R
Sbjct: 385 LL--SEVAGHSSAVTSVSLSRNGNRILTSGRDNVHNVFDTRTLEICGTLRA--SGNR--- 437
Query: 322 KCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQIS 357
LA+ C S D Y V +GS D + VW +S
Sbjct: 438 --LASNWSRS-CISPDDDY-VAAGSADGSVHVWSLS 469
Score = 125 (49.1 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 69/290 (23%), Positives = 111/290 (38%)
Query: 5 SVVDHHCLTTLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNN 62
S + C + H S+ L+TG D V+ WD N+ + + + S N
Sbjct: 211 STIPSTCANRIHAHEGGCGSIVFEYNSGTLFTGGQDRAVKMWDTNS-GTLIKSLYGSLGN 269
Query: 63 IVAVGKGAVKSLVVLA---DKLF-----SAHQDHKIRVWKINNQEPDHQKYTRLATLPTL 114
I+ + V+ A + LF S H + D K++ +
Sbjct: 270 ILDMAVTHDNKSVIAATSSNNLFVWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAA 329
Query: 115 GDRAIKLLMPKNHVQIRRHKT-CT-WVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTS 172
DR IKL HK CT V +A+ L+ D ++S D +++W
Sbjct: 330 YDRTIKLW--------DLHKGYCTNTVLFTSNCNAICLSIDGLTVFSGHMDGNLRLWDIQ 381
Query: 173 DFKCLESITNAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNS 231
K L + H A+ +V+LS +G+ + T D V+ +L R S
Sbjct: 382 TGKLLSEVAG-HSSAVTSVSLSRNGNRILTSGRDNVHNVFDTRTLEICGTLRASGNRLAS 440
Query: 232 GINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILC 281
+ +S D + +G+ D S+ VW + GNI V L+ T ILC
Sbjct: 441 NWSRSCISPDDDYVAAGSADGSVHVWSLSK--GNI--VSILKEQTSPILC 486
Score = 125 (49.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 44/201 (21%), Positives = 88/201 (43%)
Query: 135 TCT-WVH-HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVA 192
TC +H H ++ + L++ DR +K+W T+ ++S+ + + ++
Sbjct: 216 TCANRIHAHEGGCGSIVFEYNSGTLFTGGQDRAVKMWDTNSGTLIKSLYGSLGNILDMAV 275
Query: 193 LSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSV-LYSGACD 251
D+ V ++ + VW S G +H+L H + A+ +S S + S A D
Sbjct: 276 THDNKSVIAATSSNNLFVWDVSSGRVRHTLTG----HTDKVCAVDVSKFSSRHVVSAAYD 331
Query: 252 RSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCL 311
R+I +W+ + G + +I C+++ V SG D +R+W I L
Sbjct: 332 RTIKLWDLHK--GYCTNTVLFTSNCNAI-CLSIDGLTVFSGHMDGNLRLW-DIQTG-KLL 386
Query: 312 AVLEGHRGPVKCLAAAIDNDR 332
+ + GH V ++ + + +R
Sbjct: 387 SEVAGHSSAVTSVSLSRNGNR 407
Score = 40 (19.1 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 16/84 (19%), Positives = 33/84 (39%)
Query: 20 SYVSSLALAGKFLYTGSSDNEV--RSWDCNTFSSELDQEFLSNNNIVAVGKGAVKSLVVL 77
S S L K L E+ R DC EL+++ + + ++A L +
Sbjct: 79 SRTSKAILQEKELLINDLQKELTQRREDCTRLQEELEEKTKTVDVLIAENLEIRSQLEEM 138
Query: 78 ADKLFSAHQDHKIRV--WKINNQE 99
++ A ++K+ + W + +
Sbjct: 139 TSRVQKAETENKMLIDRWMLQKMQ 162
>ZFIN|ZDB-GENE-030131-1946 [details] [associations]
symbol:wsb1 "WD repeat and SOCS box-containing 1"
species:7955 "Danio rerio" [GO:0035556 "intracellular signal
transduction" evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143
ZFIN:ZDB-GENE-030131-1946 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 HSSP:P16649 EMBL:BC054567
IPI:IPI00486577 RefSeq:NP_955927.1 UniGene:Dr.33037
ProteinModelPortal:Q7T2F6 STRING:Q7T2F6 Ensembl:ENSDART00000008854
GeneID:323226 KEGG:dre:323226 CTD:26118 HOGENOM:HOG000063727
HOVERGEN:HBG034543 InParanoid:Q7T2F6 KO:K10341 OMA:GHHNDVV
OrthoDB:EOG40ZQXJ NextBio:20808143 Bgee:Q7T2F6 Uniprot:Q7T2F6
Length = 423
Score = 175 (66.7 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 52/157 (33%), Positives = 79/157 (50%)
Query: 201 TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGS-VLYSGACDRSIIVWEK 259
TG + +IK+W G +L+D H + L + DGS VL S + D+++ VW+
Sbjct: 146 TGLNNGRIKIWDVYTGKLLLNLMD----HTDIVRDLTFAPDGSLVLVSASRDKTLRVWDL 201
Query: 260 EEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIWRGIDRNYTCLAVLEGH 317
+ DDGN++ V LRGH + C A D ++CS A K + +W +D+ YT + LEGH
Sbjct: 202 K-DDGNMVKV--LRGHQNWVYCSAFSPDSSVLCSVGAGKAVFLW-DMDK-YTLIRKLEGH 256
Query: 318 RGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVW 354
V C C+ S L+ + S D + VW
Sbjct: 257 HNDVVC---------CEFSPDGALLATASYDTRVIVW 284
Score = 149 (57.5 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 53/188 (28%), Positives = 88/188 (46%)
Query: 152 KDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSA--DKKIK 209
+D+ LL + + IKIW K L ++ + H D + + + DG + SA DK ++
Sbjct: 139 QDQLLLATGLNNGRIKIWDVYTGKLLLNLMD-HTDIVRDLTFAPDGSLVLVSASRDKTLR 197
Query: 210 VWR-RSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILV 268
VW + GN +V VL H + + A S D SVL S +++ +W+ ++ +
Sbjct: 198 VWDLKDDGN----MVKVLRGHQNWVYCSAFSPDSSVLCSVGAGKAVFLWDMDK----YTL 249
Query: 269 VGALRGHTKSILCMAVVSD--LVCSGSADKTIRIWRGIDRNYTCLAVLE-GHRGPVKC-L 324
+ L GH ++C D L+ + S D + +W D +T +LE GH P +
Sbjct: 250 IRKLEGHHNDVVCCEFSPDGALLATASYDTRVIVW---DP-HTATVLLELGHLFPPPSPI 305
Query: 325 AAAIDNDR 332
A NDR
Sbjct: 306 FAGGANDR 313
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 176 (67.0 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 69/308 (22%), Positives = 140/308 (45%)
Query: 16 KGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAVKS 73
KGH + ++S+ + GK L TGS D + W + ++ + +++ +V+
Sbjct: 15 KGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAF--RYVGHKDVIT----SVQ- 67
Query: 74 LVVLADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLGDRA----IKLLMPKNHVQ 129
L + L SA +D IR+W + + + A + ++ A + ++
Sbjct: 68 FSPLGNLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASEDKSIK 127
Query: 130 I----RRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHD 185
+ R+ + H V + D L+ S S D+TIKIW T++ +C+ + ++
Sbjct: 128 VWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVG 187
Query: 186 DAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSV 244
A N VA + +G + + +D +K+W + + L+ + H+ G+N ++ G+
Sbjct: 188 FA-NFVAFNPNGTCIASAGSDHTVKIW----DIRVNKLLQHYQVHSGGVNCVSFHPSGNY 242
Query: 245 LYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVS--DLVCSGSADKTIRIWR 302
L + + D ++ + + E G ++ L+GHT + ++ +L SG AD + +WR
Sbjct: 243 LITASSDGTLKILDLLE--GRLIYT--LQGHTGPVFTVSFSKGGELFTSGGADAQVLLWR 298
Query: 303 -GIDR-NY 308
D NY
Sbjct: 299 TNFDELNY 306
Score = 151 (58.2 bits), Expect = 9.5e-08, P = 9.5e-08
Identities = 56/191 (29%), Positives = 84/191 (43%)
Query: 138 WVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDG 197
+V H D ++++ + LL S S DRTI++W D + S AH + +V S DG
Sbjct: 56 YVGHKDVITSVQFSPLGNLLASASRDRTIRLW-IPDKRGKSSEFKAHTAPVRSVDFSADG 114
Query: 198 D-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIV 256
+ + S DK IKVW +SL RH + S DG ++ S + D++I +
Sbjct: 115 QFLASASEDKSIKVWNMYRQRFLYSLY----RHTHWVRCAKFSPDGRLIVSCSEDKTIKI 170
Query: 257 WEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSA--DKTIRIWRGIDRNYTCLAVL 314
W D N V +A + C SA D T++IW I N L
Sbjct: 171 W----DTTNKQCVNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIW-DIRVN-KLLQHY 224
Query: 315 EGHRGPVKCLA 325
+ H G V C++
Sbjct: 225 QVHSGGVNCVS 235
Score = 138 (53.6 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 50/209 (23%), Positives = 96/209 (45%)
Query: 116 DRAIKLLMPKNHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFK 175
DR I+L +P +R K+ + H V ++ + D L S S D++IK+W +
Sbjct: 81 DRTIRLWIPD-----KRGKSSEFKAHTAPVRSVDFSADGQFLASASEDKSIKVWNMYRQR 135
Query: 176 CLESITNAHDDAINAVALSDDGDVYTG-SADKKIKVWRRSPGNKKHSLVDVLERHNSGIN 234
L S+ H + S DG + S DK IK+W + NK+ V+ N
Sbjct: 136 FLYSLYR-HTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTT--NKQ--CVNNFSDFVGFAN 190
Query: 235 ALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAV--VSDLVCSG 292
+A + +G+ + S D ++ +W+ + ++ + H+ + C++ + + +
Sbjct: 191 FVAFNPNGTCIASAGSDHTVKIWDIRVNK----LLQHYQVHSGGVNCVSFHPSGNYLITA 246
Query: 293 SADKTIRIWRGIDRNYTCLAVLEGHRGPV 321
S+D T++I ++ + L+GH GPV
Sbjct: 247 SSDGTLKILDLLEGRL--IYTLQGHTGPV 273
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 176 (67.0 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 64/300 (21%), Positives = 138/300 (46%)
Query: 16 KGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAVKS 73
KGH + ++S+ + GK L T S D + W+C + ++ + ++V +V+
Sbjct: 15 KGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAF--RYVGHKDVVT----SVQ- 67
Query: 74 LVVLADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLGDRA----IKLLMPKNHVQ 129
L + L SA +D +R+W + + + A + ++ A + ++
Sbjct: 68 FSPLGNLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKSIK 127
Query: 130 I----RRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHD 185
+ R+ + H V + D L+ S S D+TIKIW T++ +C+ + +++
Sbjct: 128 VWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVG 187
Query: 186 DAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSV 244
A N V + +G + + +D +K+W + + L+ + H+ G+N ++ G+
Sbjct: 188 FA-NFVDFNPNGTCIASAGSDHTVKIW----DIRVNKLLQHYQVHSGGVNCVSFHPSGNY 242
Query: 245 LYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVS--DLVCSGSADKTIRIWR 302
+ + + D ++ + + E G ++ L+GHT + ++ +L SG AD + +WR
Sbjct: 243 IITASSDGTLKILDLLE--GRLIYT--LQGHTGPVFTVSFSKGGELFSSGGADTQVLLWR 298
Score = 139 (54.0 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 62/260 (23%), Positives = 102/260 (39%)
Query: 17 GHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAVKSL 74
GH V+S+ + G L + S D VR W + EF ++ V+S+
Sbjct: 58 GHKDVVTSVQFSPLGNLLASASRDRTVRLWIPDKRGKS--SEFKAHT-------APVRSV 108
Query: 75 VVLADKLF--SAHQDHKIRVWKINNQE-----PDHQKYTRLATLPTLGDRAIKLLMPKNH 127
AD F +A +D I+VW + Q H + R A G R I
Sbjct: 109 DFSADGQFLATASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDG-RLIVSCSEDKT 167
Query: 128 VQI--RRHKTCT--WVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA 183
++I +K C + V + + + T + S D T+KIW K L+
Sbjct: 168 IKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHY-QV 226
Query: 184 HDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDG 242
H +N V+ G+ + T S+D +K+ G L+ L+ H + ++ S G
Sbjct: 227 HSGGVNCVSFHPSGNYIITASSDGTLKILDLLEGR----LIYTLQGHTGPVFTVSFSKGG 282
Query: 243 SVLYSGACDRSIIVWEKEED 262
+ SG D +++W D
Sbjct: 283 ELFSSGGADTQVLLWRTNFD 302
>MGI|MGI:2443143 [details] [associations]
symbol:Wdr3 "WD repeat domain 3" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:2443143 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR007148
Pfam:PF04003 GeneTree:ENSGT00550000074925 HOGENOM:HOG000212524
KO:K14556 OMA:SIFAHDD HSSP:Q02793 CTD:10885 HOVERGEN:HBG013192
OrthoDB:EOG412M4S EMBL:AK050738 EMBL:AK050797 EMBL:BC063100
IPI:IPI00221822 RefSeq:NP_780761.1 UniGene:Mm.24591
ProteinModelPortal:Q8BHB4 SMR:Q8BHB4 STRING:Q8BHB4
PhosphoSite:Q8BHB4 PaxDb:Q8BHB4 PRIDE:Q8BHB4
Ensembl:ENSMUST00000052120 GeneID:269470 KEGG:mmu:269470
UCSC:uc008qqo.2 InParanoid:Q8BHB4 NextBio:392854 Bgee:Q8BHB4
Genevestigator:Q8BHB4 Uniprot:Q8BHB4
Length = 942
Score = 161 (61.7 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 69/303 (22%), Positives = 127/303 (41%)
Query: 14 TLKGHNSYVSSLALAG-KFLYTGSSDNEVRSWD-----C-NTFSSE--LDQEFLSNNNIV 64
T+ GH S V +L+ + ++ + ++ W+ C T E L F+ + V
Sbjct: 409 TIGGHRSDVRTLSFSSDNIAVLSAAADSIKIWNRSTLQCIRTMPCEYALCSFFVPGDRQV 468
Query: 65 AVGK--GAVKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLGDRAIKLL 122
+G G ++ + + L H +W ++ PD + + + +L+
Sbjct: 469 VIGTKTGNLQLYDLASGTLLETIAAHDGALWSMS-LSPDQRGFVTGGADKAVKFWDFELV 527
Query: 123 MPKNHVQIRRHKTCTWVHHVDA-VSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESIT 181
KN Q R T +D V ++ + ++ LL D T+K++ K S+
Sbjct: 528 TDKNSTQKRLSVKQTRTLQLDEDVLCVSYSPNQKLLAVSLLDCTVKVFYVDTLKFFLSLY 587
Query: 182 NAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSC 240
H + + +S DG + TGSAD+ +K+W G+ SL H+ + L
Sbjct: 588 G-HKLPVLCMDISHDGALIATGSADRNVKIWGLDFGDCHRSLF----AHDDSVMYLRFVP 642
Query: 241 DGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVV--SDLVCSGSADKTI 298
+ ++ D I W+ ++ + + L GH + I C+AV D V S S DK++
Sbjct: 643 KSHLFFTAGKDHKIKQWDADKFEH----IQTLEGHHQEIWCLAVSPSGDYVVSASHDKSL 698
Query: 299 RIW 301
R+W
Sbjct: 699 RLW 701
Score = 136 (52.9 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 53/227 (23%), Positives = 106/227 (46%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H V L+ + D + S + D +IKIW S +C+ ++ + A+ + + D V
Sbjct: 413 HRSDVRTLSFSSDNIAVLSAAAD-SIKIWNRSTLQCIRTMPCEY--ALCSFFVPGDRQVV 469
Query: 201 TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKE 260
G+ ++++ + G +L++ + H+ + +++LS D +G D+++ W+ E
Sbjct: 470 IGTKTGNLQLYDLASG----TLLETIAAHDGALWSMSLSPDQRGFVTGGADKAVKFWDFE 525
Query: 261 -EDDGNI----LVVGALRGHT--KSILCMAVVSD--LVCSGSADKTIRIWRGIDRNYTCL 311
D N L V R + +LC++ + L+ D T++++ +D L
Sbjct: 526 LVTDKNSTQKRLSVKQTRTLQLDEDVLCVSYSPNQKLLAVSLLDCTVKVFY-VDTLKFFL 584
Query: 312 AVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQISF 358
+ L GH+ PV C+ D S L+ +GS D ++K+W + F
Sbjct: 585 S-LYGHKLPVLCM---------DISHDGALIATGSADRNVKIWGLDF 621
Score = 131 (51.2 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 36/123 (29%), Positives = 58/123 (47%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H V + ++ D L+ + S DR +KIW C S+ AHDD++ + ++
Sbjct: 589 HKLPVLCMDISHDGALIATGSADRNVKIWGLDFGDCHRSLF-AHDDSVMYLRFVPKSHLF 647
Query: 201 -TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEK 259
T D KIK W K + LE H+ I LA+S G + S + D+S+ +WE+
Sbjct: 648 FTAGKDHKIKQWDAD----KFEHIQTLEGHHQEIWCLAVSPSGDYVVSASHDKSLRLWER 703
Query: 260 EED 262
+
Sbjct: 704 TRE 706
Score = 113 (44.8 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 69/315 (21%), Positives = 136/315 (43%)
Query: 64 VAVG--KGAVKSLVVLADKL--FSAHQDHKIRVWKINNQEPDHQ---KYTRLATLPTLGD 116
+ +G + V++L +D + SA D I++W + + +Y L + GD
Sbjct: 408 ITIGGHRSDVRTLSFSSDNIAVLSAAAD-SIKIWNRSTLQCIRTMPCEYA-LCSFFVPGD 465
Query: 117 RAIKLLMPKNHVQIRRHKTCTWVH----HVDAVSALALTKDETLLYSVSWDRTIKIWRTS 172
R + + ++Q+ + T + H A+ +++L+ D+ + D+ +K W
Sbjct: 466 RQVVIGTKTGNLQLYDLASGTLLETIAAHDGALWSMSLSPDQRGFVTGGADKAVKFW--- 522
Query: 173 DFKCL--ESITNAHDDAINAVALSDDGDVY--TGSADKKIKVWRRSPGNKKHSLVDVLE- 227
DF+ + ++ T L D DV + S ++K+ K VD L+
Sbjct: 523 DFELVTDKNSTQKRLSVKQTRTLQLDEDVLCVSYSPNQKLLAVSLLDCTVKVFYVDTLKF 582
Query: 228 -----RHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCM 282
H + + +S DG+++ +G+ DR++ +W + D + +L H S++ +
Sbjct: 583 FLSLYGHKLPVLCMDISHDGALIATGSADRNVKIWGLDFGDCH----RSLFAHDDSVMYL 638
Query: 283 AVV--SDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSY 340
V S L + D I+ W D+ + + LEGH + CLA + D Y
Sbjct: 639 RFVPKSHLFFTAGKDHKIKQWDA-DK-FEHIQTLEGHHQEIWCLAVSPSGD--------Y 688
Query: 341 LVCSGSLDCDIKVWQ 355
+V S S D +++W+
Sbjct: 689 VV-SASHDKSLRLWE 702
Score = 92 (37.4 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 8 DHHCLTTLKGHNSYVSSLALAG--KFLYTGSSDNEVRSWDCNTFSSELD 54
+ HC T+ GH + V L L K L TG++D+E+R+WD + + E+D
Sbjct: 180 NQHCFKTMVGHRTEVWGLVLVSEEKRLITGAADSELRAWDID-YLQEID 227
>UNIPROTKB|Q2KID6 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9913 "Bos
taurus" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013 EMBL:BC112677
IPI:IPI00704198 RefSeq:NP_001039827.1 UniGene:Bt.74313
ProteinModelPortal:Q2KID6 STRING:Q2KID6 PRIDE:Q2KID6
Ensembl:ENSBTAT00000029844 GeneID:533951 KEGG:bta:533951 CTD:5356
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595
HOVERGEN:HBG053621 InParanoid:Q2KID6 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB NextBio:20876207 Uniprot:Q2KID6
Length = 513
Score = 176 (67.0 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 75/307 (24%), Positives = 135/307 (43%)
Query: 15 LKGHNSYVSSLAL--AGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAVK 72
+ GH +V +A+ ++ TGS+D ++ WD S +L LS ++ +G +
Sbjct: 199 ISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLA--SGKLK---LSLTGHISTVRGVIV 253
Query: 73 SLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLG-DRAIKLLMPKNHVQIR 131
S + LFS +D +++ W + + + L+ + L I +L+ +
Sbjct: 254 S--TRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTA 311
Query: 132 RH---KTCTWVH----HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAH 184
R +T VH H +AV+ + E + + S D TI++W K ++TN H
Sbjct: 312 RIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTN-H 370
Query: 185 DDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSV 244
++ AV L + + IK W+ G S + L HN+ IN L ++ DG V
Sbjct: 371 KKSVRAVVLHPRHYTFASGSPDNIKQWKFPDG----SFIQNLSGHNAIINTLTVNSDG-V 425
Query: 245 LYSGACDRSIIVWEKEEDDGNILV-----VGALRGHTKSILCMAVVSDL-VCSGSADKTI 298
L SGA + ++ +W+ V G+L + C S+ + + ADKTI
Sbjct: 426 LVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIFACAFDQSESRLLTAEADKTI 485
Query: 299 RIWRGID 305
++++ D
Sbjct: 486 KVYKEDD 492
>UNIPROTKB|E2QYT6 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GeneTree:ENSGT00700000104496 OMA:ITAEADK EMBL:AAEX03010065
Ensembl:ENSCAFT00000013353 Uniprot:E2QYT6
Length = 515
Score = 176 (67.0 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 75/307 (24%), Positives = 135/307 (43%)
Query: 15 LKGHNSYVSSLAL--AGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAVK 72
+ GH +V +A+ ++ TGS+D ++ WD S +L LS ++ +G +
Sbjct: 201 ISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLA--SGKLK---LSLTGHISTVRGVIV 255
Query: 73 SLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLG-DRAIKLLMPKNHVQIR 131
S + LFS +D +++ W + + + L+ + L I +L+ +
Sbjct: 256 S--TRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTA 313
Query: 132 RH---KTCTWVH----HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAH 184
R +T VH H +AV+ + E + + S D TI++W K ++TN H
Sbjct: 314 RIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTN-H 372
Query: 185 DDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSV 244
++ AV L + + IK W+ G S + L HN+ IN L ++ DG V
Sbjct: 373 KKSVRAVVLHPRHYTFASGSPDNIKQWKFPDG----SFIQNLSGHNAIINTLTVNSDG-V 427
Query: 245 LYSGACDRSIIVWEKEEDDGNILV-----VGALRGHTKSILCMAVVSDL-VCSGSADKTI 298
L SGA + ++ +W+ V G+L + C S+ + + ADKTI
Sbjct: 428 LVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIFACAFDQSESRLLTAEADKTI 487
Query: 299 RIWRGID 305
++++ D
Sbjct: 488 KVYKEDD 494
>ZFIN|ZDB-GENE-040426-2787 [details] [associations]
symbol:plrg1 "pleiotropic regulator 1"
species:7955 "Danio rerio" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043518 "negative regulation of DNA
damage response, signal transduction by p53 class mediator"
evidence=IGI;IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-2787 GO:GO:0043066
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043518
GeneTree:ENSGT00700000104496 EMBL:AL935184 IPI:IPI00993121
ProteinModelPortal:F1R5Z8 Ensembl:ENSDART00000125834
ArrayExpress:F1R5Z8 Bgee:F1R5Z8 Uniprot:F1R5Z8
Length = 519
Score = 176 (67.0 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 77/308 (25%), Positives = 137/308 (44%)
Query: 15 LKGHNSYVSSLAL--AGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAVK 72
+ GH +V S+A+ ++ TGS+D ++ WD S +L LS ++ +G
Sbjct: 204 ISGHLGWVRSIAVEPGNQWFVTGSADRTIKIWDLA--SGKLK---LSLTGHISTVRGVAV 258
Query: 73 SLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLG-DRAIKLLMPKNHVQIR 131
S + LFS +D +++ W + + + L+ + L I +L+ +
Sbjct: 259 SN--RSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYDLDLHPTIDVLVTCSRDATA 316
Query: 132 RH---KTCTWVH----HVDAVSALALTKDETLLYSV-SWDRTIKIWRTSDFKCLESITNA 183
R +T VH H + V+ + E + +V S D TI++W K ++TN
Sbjct: 317 RVWDIRTKANVHTLSGHTNTVATVKCQSAEPQVVTVGSHDTTIRLWDLVAGKTRATLTN- 375
Query: 184 HDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGS 243
H ++ A+ L + + IK W+ GN + L HN+ IN LA++ DG
Sbjct: 376 HKKSVRALVLHPRQYTFASGSPDNIKQWKFPDGN----FIQNLSGHNAIINTLAVNSDG- 430
Query: 244 VLYSGACDRSIIVWEKEEDDG--NILVV---GALRGHTKSILCMAVVSDL-VCSGSADKT 297
VL SGA + +I +W+ I G+L + C+ S+ + + ADKT
Sbjct: 431 VLVSGADNGTIHMWDWRTGYNFQRIHAAVQPGSLDSESGIFSCVFDQSESRLITAEADKT 490
Query: 298 IRIWRGID 305
I++++ D
Sbjct: 491 IKVYKEDD 498
Score = 136 (52.9 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 54/188 (28%), Positives = 84/188 (44%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD-V 199
H+ V ++A+ + S DRTIKIW + K S+T H + VA+S+ +
Sbjct: 207 HLGWVRSIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTG-HISTVRGVAVSNRSPYL 265
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEK 259
++ DK++K W NK ++ H S + L L VL + + D + VW+
Sbjct: 266 FSCGEDKQVKCWDLEY-NK---VIRHYHGHLSAVYDLDLHPTIDVLVTCSRDATARVWDI 321
Query: 260 EEDDGNILVVGALRGHTKSIL---CMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEG 316
N V L GHT ++ C + +V GS D TIR+W + T A L
Sbjct: 322 RTK-AN---VHTLSGHTNTVATVKCQSAEPQVVTVGSHDTTIRLW-DLVAGKT-RATLTN 375
Query: 317 HRGPVKCL 324
H+ V+ L
Sbjct: 376 HKKSVRAL 383
Score = 129 (50.5 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 63/264 (23%), Positives = 121/264 (45%)
Query: 14 TLKGHNSYVSSLALAGK--FLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAV 71
+L GH S V +A++ + +L++ D +V+ WD +++ + + + ++ AV +
Sbjct: 245 SLTGHISTVRGVAVSNRSPYLFSCGEDKQVKCWDLEY--NKVIRHY--HGHLSAVYDLDL 300
Query: 72 KSLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLGDRAIK---LLMPKNHV 128
+ D L + +D RVW I + H T+ T+ ++ + + + +
Sbjct: 301 HPTI---DVLVTCSRDATARVWDIRTKANVHTLSGHTNTVATVKCQSAEPQVVTVGSHDT 357
Query: 129 QIR-----RHKT-CTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITN 182
IR KT T +H +V AL L + S S D IK W+ D +++++
Sbjct: 358 TIRLWDLVAGKTRATLTNHKKSVRALVLHPRQYTFASGSPDN-IKQWKFPDGNFIQNLSG 416
Query: 183 AHDDAINAVALSDDGDVYTGSADKKIKVWRRSPG---NKKHSLVDVLERHN-SGINALAL 238
H+ IN +A++ DG + +G+ + I +W G + H+ V + SGI +
Sbjct: 417 -HNAIINTLAVNSDGVLVSGADNGTIHMWDWRTGYNFQRIHAAVQPGSLDSESGIFSCVF 475
Query: 239 SCDGSVLYSGACDRSIIVWEKEED 262
S L + D++I V+ KE+D
Sbjct: 476 DQSESRLITAEADKTIKVY-KEDD 498
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 174 (66.3 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 57/219 (26%), Positives = 99/219 (45%)
Query: 155 TLLYSVSWDRTIKIW--RTSDFKCLESITNAHDDAINAVALSDDGDVYTG-SADKKIKVW 211
+++ S S D TIK+W T DF E H D++ ++ G + SAD IK+W
Sbjct: 121 SVMVSASEDATIKVWDYETGDF---ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLW 177
Query: 212 RRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGA 271
+ + + H+ ++++A+ +G + S A D++I +WE + V
Sbjct: 178 ----DFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTG----YCVKT 229
Query: 272 LRGHTKSILCMAVVSD--LVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAID 329
GH + + + D L+ S S D+T+R+W + C A L H V+C++ A +
Sbjct: 230 FTGHREWVRMVRPNQDGTLIASCSNDQTVRVW--VVATKECKAELREHEHVVECISWAPE 287
Query: 330 ND-----RCDSSDTSY------LVCSGSLDCDIKVWQIS 357
+ S+T + SGS D IK+W +S
Sbjct: 288 SSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 326
Score = 160 (61.4 bits), Expect = 6.9e-09, P = 6.9e-09
Identities = 52/196 (26%), Positives = 90/196 (45%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD-V 199
H D+V ++ LL S S D TIK+W F+C+ ++ + HD +++VA+ +GD +
Sbjct: 149 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTM-HGHDHNVSSVAIMPNGDHI 207
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVW-- 257
+ + DK IK+W G V H + + + DG+++ S + D+++ VW
Sbjct: 208 VSAARDKTIKMWEVQTGY----CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263
Query: 258 -------EKEEDDGNILVVGALRGHTKSILCMAVVSD---------LVCSGSADKTIRIW 301
E E + + + + S + A S+ + SGS DKTI++W
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Query: 302 RGIDRNYTCLAVLEGH 317
+ CL L GH
Sbjct: 324 -DVSTGM-CLMTLVGH 337
Score = 134 (52.2 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 60/234 (25%), Positives = 104/234 (44%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H VS++A+ + + S + D+TIK+W C+++ T H + + V + DG +
Sbjct: 191 HDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTG-HREWVRMVRPNQDGTLI 249
Query: 201 TG-SADKKIKVW----RRSPGN-KKHS-LVDVL----ERHNSGINALALS------CDGS 243
S D+ ++VW + ++H +V+ + E S I+ S G
Sbjct: 250 ASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGP 309
Query: 244 VLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIW 301
L SG+ D++I +W+ G L+ L GH + + S + S + DKT+R+W
Sbjct: 310 FLLSGSRDKTIKMWDVST--GMCLMT--LVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 302 RGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQ 355
+N C+ L H V L D T+ V +GS+D +KVW+
Sbjct: 366 DY--KNKRCMKTLNAHEHFVTSL---------DFHKTAPYVVTGSVDQTVKVWE 408
>UNIPROTKB|E1C9D6 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS
EMBL:AADN02061119 IPI:IPI00578429 RefSeq:XP_425517.3
ProteinModelPortal:E1C9D6 PRIDE:E1C9D6 Ensembl:ENSGALT00000023410
GeneID:427945 KEGG:gga:427945 Uniprot:E1C9D6
Length = 340
Score = 172 (65.6 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 74/302 (24%), Positives = 134/302 (44%)
Query: 14 TLKGHNS--YVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAV 71
TL+GH + Y + K L + S D ++ WD T ++++ L ++ ++
Sbjct: 50 TLRGHLAKIYAMHWSTDSKLLVSASQDGKLIVWDTYT-TNKVHAIPLRSSWVMTCAYAPS 108
Query: 72 KSLVVLA--DKLFSAHQDHKIRVW--KINNQEPDHQKYTRLATLPTLGDRAIKLLMPKN- 126
+ V D + S + + K R K++ + H Y L+ L D +I
Sbjct: 109 GNFVACGGLDNMCSIY-NLKTREGNVKVSRELSAHTGY--LSCCRFLDDNSIVTSSGDTT 165
Query: 127 ----HVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITN 182
++ + KT H D +S LA++ D L S + D T K+W + C ++ +
Sbjct: 166 CALWDIETGQQKTVFLGHTGDCMS-LAVSPDFKLFISGACDATAKLWDVREGTCRQTFSG 224
Query: 183 AHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCD 241
H+ INA+ +G+ + TGS D +++ + +V E GI ++A S
Sbjct: 225 -HESDINAICFFPNGEAICTGSDDATCRLFDLRADQEL--IVYSHESIICGITSVAFSRS 281
Query: 242 GSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIR 299
G +L +G D + +W+ + + VG L GH + C+ V +D V +GS D ++
Sbjct: 282 GRLLLAGYDDFNCNIWDSLKAER----VGILSGHDNRVSCLGVTADGMAVATGSWDSFLK 337
Query: 300 IW 301
IW
Sbjct: 338 IW 339
Score = 119 (46.9 bits), Expect = 0.00019, P = 0.00019
Identities = 44/175 (25%), Positives = 72/175 (41%)
Query: 184 HDDAINAVALSDDGDVY-TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDG 242
H I A+ S D + + S D K+ VW NK H++ +S + A + G
Sbjct: 54 HLAKIYAMHWSTDSKLLVSASQDGKLIVWDTYTTNKVHAI----PLRSSWVMTCAYAPSG 109
Query: 243 SVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD-LVCSGSADKTIRIW 301
+ + G D ++ + +GN+ V L HT + C + D + + S D T +W
Sbjct: 110 NFVACGGLDNMCSIYNLKTREGNVKVSRELSAHTGYLSCCRFLDDNSIVTSSGDTTCALW 169
Query: 302 RGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
I+ L GH G C++ A+ D L SG+ D K+W +
Sbjct: 170 -DIETGQQKTVFL-GHTGD--CMSLAVSPD-------FKLFISGACDATAKLWDV 213
>POMBASE|SPAC6B12.15 [details] [associations]
symbol:cpc2 "RACK1 ortholog Cpc2" species:4896
"Schizosaccharomyces pombe" [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0031137 "regulation of conjugation with cellular
fusion" evidence=IGI] [GO:0031139 "positive regulation of
conjugation with cellular fusion" evidence=IMP] [GO:0032956
"regulation of actin cytoskeleton organization" evidence=IGI]
[GO:0032995 "regulation of fungal-type cell wall biogenesis"
evidence=IGI] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0035556 "intracellular signal transduction"
evidence=IMP] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:2000766 "negative regulation of cytoplasmic translation"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC6B12.15 GO:GO:0005737 EMBL:CU329670
GO:GO:0034613 GO:GO:0016020 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0032995
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043022 GO:GO:0032956 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM EMBL:L37885 EMBL:AF320333 EMBL:D89247
PIR:T43158 PIR:T43299 RefSeq:NP_593770.1 ProteinModelPortal:Q10281
SMR:Q10281 IntAct:Q10281 MINT:MINT-1203489 STRING:Q10281
PRIDE:Q10281 EnsemblFungi:SPAC6B12.15.1 GeneID:2543298
KEGG:spo:SPAC6B12.15 OrthoDB:EOG437VPP NextBio:20804316
GO:GO:2000766 GO:GO:0031139 Uniprot:Q10281
Length = 314
Score = 171 (65.3 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 46/165 (27%), Positives = 74/165 (44%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H VS AL+ D S SWD+TI++W +C D ++ D+ V
Sbjct: 62 HSHFVSDCALSFDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQVV 121
Query: 201 TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSC--DGSVLYSGACDRSIIVWE 258
+GS DK IK+W GN K+++ D H+ ++ + S D S D+++ VW+
Sbjct: 122 SGSRDKTIKIWNII-GNCKYTITD--GGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWD 178
Query: 259 KEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIW 301
E + + GHT + + + D L SG D T+ +W
Sbjct: 179 LE----TFSLRTSHYGHTGYVSAVTISPDGSLCASGGRDGTLMLW 219
Score = 138 (53.6 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 42/132 (31%), Positives = 68/132 (51%)
Query: 136 CT--WVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA-HDDAINAVA 192
CT +V H V +++++ D + S S D+TIKIW C +IT+ H D ++ V
Sbjct: 97 CTHQFVGHTSDVLSVSISPDNRQVVSGSRDKTIKIWNIIG-NCKYTITDGGHSDWVSCVR 155
Query: 193 LSDDGDVYTG-SA--DKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGA 249
S + D T SA DK +KVW + + S H ++A+ +S DGS+ SG
Sbjct: 156 FSPNPDNLTFVSAGWDKAVKVWDLETFSLRTSHYG----HTGYVSAVTISPDGSLCASGG 211
Query: 250 CDRSIIVWEKEE 261
D ++++W+ E
Sbjct: 212 RDGTLMLWDLNE 223
Score = 138 (53.6 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 51/191 (26%), Positives = 89/191 (46%)
Query: 177 LESITNAHDDAINAVALSDDG-DVY-TGSADKKIKVWRRSPGNKKHSLVDV-LERHNSGI 233
L + H + +++ + + D+ +GS DK I +W + + + L H+ +
Sbjct: 7 LRATLEGHSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFV 66
Query: 234 NALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCS 291
+ ALS D S + D++I +W+ E+ + VG HT +L +++ D V S
Sbjct: 67 SDCALSFDSHYALSASWDKTIRLWDLEKGECTHQFVG----HTSDVLSVSISPDNRQVVS 122
Query: 292 GSADKTIRIWRGIDR-NYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCD 350
GS DKTI+IW I YT GH V C+ + + D + +++ S D
Sbjct: 123 GSRDKTIKIWNIIGNCKYTITD--GGHSDWVSCVRFSPNPD-----NLTFV--SAGWDKA 173
Query: 351 IKVWQI-SFPL 360
+KVW + +F L
Sbjct: 174 VKVWDLETFSL 184
>SGD|S000000653 [details] [associations]
symbol:PWP2 "Conserved 90S pre-ribosomal component"
species:4932 "Saccharomyces cerevisiae" [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000480 "endonucleolytic cleavage in 5'-ETS of
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0030010 "establishment of cell polarity"
evidence=IMP] [GO:0034388 "Pwp2p-containing subcomplex of 90S
preribosome" evidence=IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0030515
"snoRNA binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000000653 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:X59720 EMBL:BK006937 GO:GO:0000910
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0030010 GO:GO:0032040
GO:GO:0000447 GO:GO:0000472 GO:GO:0000480
GeneTree:ENSGT00550000074981 HOGENOM:HOG000160363 KO:K14558
OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 OrthoDB:EOG4350F7 EMBL:X78964 PIR:S44226
RefSeq:NP_009984.1 ProteinModelPortal:P25635 SMR:P25635
DIP:DIP-1868N IntAct:P25635 MINT:MINT-392472 STRING:P25635
PaxDb:P25635 PeptideAtlas:P25635 EnsemblFungi:YCR057C GeneID:850422
KEGG:sce:YCR057C CYGD:YCR057c NextBio:965992 Genevestigator:P25635
GermOnline:YCR057C GO:GO:0034388 Uniprot:P25635
Length = 923
Score = 174 (66.3 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 54/177 (30%), Positives = 81/177 (45%)
Query: 184 HDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDG 242
H D+ N++A S DG V T S D KIKVW + G + E H S + A+ + G
Sbjct: 344 HFDSTNSLAYSPDGSRVVTASEDGKIKVWDITSG----FCLATFEEHTSSVTAVQFAKRG 399
Query: 243 SVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAV--VSDLVCSGSADK-TIR 299
V++S + D ++ W+ G R C+AV ++VC+GS D I
Sbjct: 400 QVMFSSSLDGTVRAWDLIRYRNFRTFTGTERIQFN---CLAVDPSGEVVCAGSLDNFDIH 456
Query: 300 IWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
+W + L L GH GPV CL+ + +N ++ S S D I++W I
Sbjct: 457 VW-SVQTGQL-LDALSGHEGPVSCLSFSQENS---------VLASASWDKTIRIWSI 502
Score = 141 (54.7 bits), Expect = 9.1e-07, Sum P(2) = 9.1e-07
Identities = 35/123 (28%), Positives = 59/123 (47%)
Query: 137 TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDD 196
T+ H +V+A+ K +++S S D T++ W ++ + T N +A+
Sbjct: 382 TFEEHTSSVTAVQFAKRGQVMFSSSLDGTVRAWDLIRYRNFRTFTGTERIQFNCLAVDPS 441
Query: 197 GDVY-TGSADK-KIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSI 254
G+V GS D I VW G L+D L H ++ L+ S + SVL S + D++I
Sbjct: 442 GEVVCAGSLDNFDIHVWSVQTGQ----LLDALSGHEGPVSCLSFSQENSVLASASWDKTI 497
Query: 255 IVW 257
+W
Sbjct: 498 RIW 500
Score = 50 (22.7 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 14/44 (31%), Positives = 19/44 (43%)
Query: 13 TTLKGHNSYVSSLALAG--KFLYTGSSDNEVRSWDCNTFSSELD 54
TT GH YV + + +YT S D V W+ S+ D
Sbjct: 185 TTFNGHRDYVMGAFFSHDQEKIYTVSKDGAVFVWEFTKRPSDDD 228
>UNIPROTKB|F1MNS4 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 IPI:IPI00711976 UniGene:Bt.20483 OMA:HHFRGSP
GeneTree:ENSGT00690000102183 EMBL:DAAA02057306
ProteinModelPortal:F1MNS4 Ensembl:ENSBTAT00000027147 Uniprot:F1MNS4
Length = 800
Score = 168 (64.2 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 60/240 (25%), Positives = 114/240 (47%)
Query: 136 CTWVH-HVDAVSALALTKDETLLYSVSWDRTIKIWR---TSDFKCLESITNAHDDAINAV 191
C +H H D V AL + + L S + D++I++WR + + C+ + H ++ +
Sbjct: 369 CQILHGHTDIVLALDVFRKGRLFASCAKDQSIRVWRMNKSGEVACVAQ-GSGHTHSVGTI 427
Query: 192 ALSDDGDVY--TGSADKKIKVW-------RRSPGNKKHSL---VDVLER-HNSGINALAL 238
S + + TGS D +K+W + G++ + +R H+ IN++A+
Sbjct: 428 CCSRLKETFLVTGSQDCTVKLWPLPEALLSKGTGHEGGPVFLQAQATQRCHDKDINSVAV 487
Query: 239 SCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCM--AVVSDLVCSGSADK 296
+ + +L +G+ DR+ +W ++G GH + + C+ + + ++ + SAD
Sbjct: 488 APNDKLLATGSQDRTAKLWALPRCQ----LLGTFSGHRRGLWCVQFSPMDQVLATASADG 543
Query: 297 TIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
TI++W D ++CL EGH V +A S + L+ SGS D +K+W I
Sbjct: 544 TIKLWALQD--FSCLKTFEGHDASVLKVAFV--------SRGTQLLSSGS-DGLLKLWTI 592
Score = 125 (49.1 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 43/173 (24%), Positives = 78/173 (45%)
Query: 154 ETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDG-DVYTGSADKKIKVWR 212
+ +L + S D TIK+W DF CL++ HD ++ VA G + + +D +K+W
Sbjct: 533 DQVLATASADGTIKLWALQDFSCLKTF-EGHDASVLKVAFVSRGTQLLSSGSDGLLKLWT 591
Query: 213 RSPGNKKHSLVDVLERHNSGINALALS-CDGSVLYSGACDRSIIVWEKEEDDGNILVVGA 271
K + V L+ H + L S D L +GA D +++W K+ + A
Sbjct: 592 I----KNNECVRTLDAHEDKVWGLHCSRLDDRAL-TGASDSRVVLW-KDVTEAEQAEEQA 645
Query: 272 LRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEG-HRGPVKC 323
R + ++ + +L+ + + + +DR +T L V++ R P C
Sbjct: 646 KR--EEQVVKQQELDNLLHEKRYLRALGLAISLDRPHTVLTVIQAIRRDPESC 696
Score = 125 (49.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 54/214 (25%), Positives = 89/214 (41%)
Query: 156 LLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALS-DDGDVYTGSADKKIKVWRRS 214
LL SV+ D + ++ + + ++ ++ L +D V S +KV+
Sbjct: 306 LLLSVTADHNLLLYDAHSLRLRKQFAGYSEEVLDVRFLGPEDSHVVVASNSPCLKVF--- 362
Query: 215 PGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRG 274
+ + S +L H + AL + G + S A D+SI VW + G + V G
Sbjct: 363 --DLQTSACQILHGHTDIVLALDVFRKGRLFASCAKDQSIRVWRMNKS-GEVACVAQGSG 419
Query: 275 HTKS---ILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRG-PVKCLAAAIDN 330
HT S I C + + +GS D T+++W + L+ GH G PV A A
Sbjct: 420 HTHSVGTICCSRLKETFLVTGSQDCTVKLWPLPE---ALLSKGTGHEGGPVFLQAQA--T 474
Query: 331 DRCDSSDTSY--------LVCSGSLDCDIKVWQI 356
RC D + L+ +GS D K+W +
Sbjct: 475 QRCHDKDINSVAVAPNDKLLATGSQDRTAKLWAL 508
Score = 57 (25.1 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 30/97 (30%), Positives = 41/97 (42%)
Query: 2 HNLSVVDHHCLTTLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNN 61
HNL + D H L K Y S L +FL G D+ V + D + S
Sbjct: 314 HNLLLYDAHSLRLRKQFAGY-SEEVLDVRFL--GPEDSHVVVASNSPCLKVFDLQ-TSAC 369
Query: 62 NIVAVGKGAVKSLVVLAD-KLF-SAHQDHKIRVWKIN 96
I+ V +L V +LF S +D IRVW++N
Sbjct: 370 QILHGHTDIVLALDVFRKGRLFASCAKDQSIRVWRMN 406
Score = 55 (24.4 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 22/84 (26%), Positives = 35/84 (41%)
Query: 18 HNSYVSSLAL--AGKFLYTGSSDNEVRSWDC-NTFSSELDQEFLSNNNIVAVGKGAVKSL 74
H + V+++A L TG D VR WD + + + ++VA + L
Sbjct: 108 HTAPVATMAFDPTSTLLATGGCDGAVRVWDVVRCYGTHHFRGSPGVVHLVAFHPDPARLL 167
Query: 75 VVLADKLFSAHQDHKIRVWKINNQ 98
LFS+ D IRVW + +
Sbjct: 168 ------LFSSAADTSIRVWSLQER 185
Score = 51 (23.0 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 23/95 (24%), Positives = 38/95 (40%)
Query: 5 SVVDHHCLTTLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTF-SSELDQEFLSNN 61
S+ + CL L H S V+SL + G + + D WD + ++ F S
Sbjct: 181 SLQERSCLAVLTAHYSAVTSLTFSADGHTMLSSGRDKICVIWDLRSLQATRTVPVFESVE 240
Query: 62 NIVAVGKGAVKSLVVLADKL--FSAHQDHKIRVWK 94
V + + L V + L +A +RVW+
Sbjct: 241 AAVLLPEEPAPELGVKSAGLHFLTAGDQGALRVWE 275
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 174 (66.3 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 78/332 (23%), Positives = 136/332 (40%)
Query: 5 SVVDHHCLT-TLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNN 61
S +D L KGH ++SL + GK + +GS D V W+ S F +
Sbjct: 3 SALDDPTLERNFKGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAY--RFTGHK 60
Query: 62 NIVAVGKGAVKSLVVLADKLFSAHQDHKIRVW--KINNQEPDHQKYTRLATLPTLGDRAI 119
+ V + + A L S+ +D +R+W + + + +T
Sbjct: 61 DAVTCVQFSPS-----AHLLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSADGQ 115
Query: 120 KLLMPKNHVQIR-----RHKT-CTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSD 173
LL + I+ R K CT H + V + D L+ SVS DRT+K+W S
Sbjct: 116 SLLTASDDQSIKLWSVHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASS 175
Query: 174 FKCLESITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGI 233
+ + + + + T S+D ++VW + H+L+ + H++ +
Sbjct: 176 RQLIHTFCEPGGYSSYVDFHPSSTCIATASSDNTVRVW----DIRTHTLLQHYQVHSAAV 231
Query: 234 NALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVV--SDLVCS 291
NAL+ G+ L + + D ++ + + E G +L L GH S C++ D S
Sbjct: 232 NALSFHPSGNHLLTASSDSTLKILDLLE--GRLLYT--LHGHQGSASCVSFSRSGDQFAS 287
Query: 292 GSADKTIRIWR-GIDR-NYT-CLAVLEGHRGP 320
+D+ + +WR D +Y+ L HR P
Sbjct: 288 AGSDQQVMVWRTNFDSVDYSRVLQQKRDHRTP 319
>TAIR|locus:2164456 [details] [associations]
symbol:AT5G40880 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR000571 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00642 PROSITE:PS50082 PROSITE:PS50103
PROSITE:PS50294 SMART:SM00320 SMART:SM00356 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AB011477 HOGENOM:HOG000239729 EMBL:BT030400 EMBL:AJ252065
IPI:IPI00524162 RefSeq:NP_198904.1 UniGene:At.25457
UniGene:At.30265 ProteinModelPortal:Q9FKR9 SMR:Q9FKR9 STRING:Q9FKR9
PRIDE:Q9FKR9 EnsemblPlants:AT5G40880.1 GeneID:834089
KEGG:ath:AT5G40880 GeneFarm:3785 TAIR:At5g40880 InParanoid:Q9FKR9
OMA:AALEGHK PhylomeDB:Q9FKR9 ProtClustDB:CLSN2686199
Genevestigator:Q9FKR9 Uniprot:Q9FKR9
Length = 472
Score = 175 (66.7 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 64/222 (28%), Positives = 105/222 (47%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H + + +AL + L+SVS D T+ IW + +C+ SI N +A + + S+ V+
Sbjct: 186 HKNDIKGIALPQGSDKLFSVSGDGTLLIWDCNSGQCVRSI-NLQAEAGSLI--SEGPWVF 242
Query: 201 TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGI--NALALSCDGSVLYSGACDRSIIVWE 258
G + +K + N K DV H G+ A++ +L++G SI+VW+
Sbjct: 243 LGLPNA-VKAFNVQ--NSK----DV---HLEGVVGQVHAMTAANGMLFAGTSSGSILVWK 292
Query: 259 KEEDDGN-ILVVGALRGH-TKSILCMAVVSDLVCSGSADKTIRIWRGIDRN-YTCLAVLE 315
+ + + + +L GH + + C V +++ SGS DKTI++W D N C L+
Sbjct: 293 ATDSESDPFKYLTSLEGHHSGEVTCFVVGGEVLYSGSVDKTIKVW---DLNTLQCRMTLK 349
Query: 316 GHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQIS 357
H G V L D+C + S SLD IK+W S
Sbjct: 350 QHIGTVTSLLCW---DKC--------LISSSLDGTIKLWACS 380
Score = 115 (45.5 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 46/193 (23%), Positives = 83/193 (43%)
Query: 78 ADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLGDRAIKLLMPKNHVQIRRHKTCT 137
+DKLFS D + +W N+ + + + + L N V+ +
Sbjct: 199 SDKLFSVSGDGTLLIWDCNSGQCVRSINLQAEAGSLISEGPWVFLGLPNAVKAFNVQNSK 258
Query: 138 WVHHVDAVSAL-ALTKDETLLYSVSWDRTIKIWRTSD-----FKCLESITNAHDDAINAV 191
VH V + A+T +L++ + +I +W+ +D FK L S+ H +
Sbjct: 259 DVHLEGVVGQVHAMTAANGMLFAGTSSGSILVWKATDSESDPFKYLTSLEGHHSGEVTCF 318
Query: 192 ALSDDGDV-YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGAC 250
+ G+V Y+GS DK IKVW + + +L ++H + +L C L S +
Sbjct: 319 VVG--GEVLYSGSVDKTIKVWDLNTLQCRMTL----KQHIGTVTSLL--CWDKCLISSSL 370
Query: 251 DRSIIVWEKEEDD 263
D +I +W E++
Sbjct: 371 DGTIKLWACSENE 383
Score = 60 (26.2 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 12 LTTLKGHNSYVSSLAL--AGKFLYTGSSDNEVRSWDCNT 48
+ L+GH + + +AL L++ S D + WDCN+
Sbjct: 180 VAALEGHKNDIKGIALPQGSDKLFSVSGDGTLLIWDCNS 218
>MGI|MGI:2384863 [details] [associations]
symbol:Tbl3 "transducin (beta)-like 3" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0032040
"small-subunit processome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR013934 InterPro:IPR015943
Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:2384863 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364 GO:GO:0032040
HSSP:P63005 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
KO:K14555 OrthoDB:EOG42JNQR OMA:HHFRGSP EMBL:AK081966 EMBL:AK137554
EMBL:AK149940 EMBL:AK165125 EMBL:BC019504 IPI:IPI00124057
RefSeq:NP_663371.2 UniGene:Mm.100353 ProteinModelPortal:Q8C4J7
SMR:Q8C4J7 STRING:Q8C4J7 PhosphoSite:Q8C4J7 PaxDb:Q8C4J7
PRIDE:Q8C4J7 Ensembl:ENSMUST00000126319 GeneID:213773
KEGG:mmu:213773 UCSC:uc008axv.1 GeneTree:ENSGT00690000102183
InParanoid:Q8C4J7 NextBio:374097 Bgee:Q8C4J7 Genevestigator:Q8C4J7
Uniprot:Q8C4J7
Length = 801
Score = 166 (63.5 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 74/309 (23%), Positives = 142/309 (45%)
Query: 73 SLVVLADKLFSAHQDHKIRVWKINNQEPDHQ--KYTR-LATLPTLGDRAIKLLMPKNH-- 127
+L AD L + DH + +++ ++ + Q Y+ + + LG +++ N
Sbjct: 299 TLARAADLLLTVTADHNLLLYEAHSLQLQKQFAGYSEEVLDVRFLGPSDSHIVVASNSPC 358
Query: 128 VQIRRHKT--CTWVH-HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESIT--N 182
+++ +T C +H H D V AL + + L S + D++I+IW+ + + + +
Sbjct: 359 LKVFELQTLACQILHGHTDIVLALDVFRKGWLFASCAKDQSIRIWKMNKAGQVACVAQGS 418
Query: 183 AHDDAINAVALS--DDGDVYTGSADKKIKVWRRSPGN-KKHSLVD----VLER------H 229
H ++ + S + + TGS D +K+W K + D +L+ H
Sbjct: 419 GHTHSVGTICCSRLKESFLVTGSQDCTVKLWPLPEALLAKSTAADSGPVLLQAQTTRRCH 478
Query: 230 NSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSI--LCMAVVSD 287
+ IN+LA+S + +L +G+ DR+ +W + ++G GH + + + +
Sbjct: 479 DKDINSLAVSPNDKLLATGSQDRTAKLWALPQCQ----LLGVFTGHRRGLWNVQFSPTDQ 534
Query: 288 LVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSL 347
++ + SAD TI++W D ++CL EGH V +A S S L+ SGS
Sbjct: 535 VLATASADGTIKLWALQD--FSCLKTFEGHDASVLKVAFV--------SRGSQLLSSGS- 583
Query: 348 DCDIKVWQI 356
D +K+W I
Sbjct: 584 DGLLKLWTI 592
Score = 125 (49.1 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 41/166 (24%), Positives = 72/166 (43%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H +++LA++ ++ LL + S DRT K+W + L T N D +
Sbjct: 478 HDKDINSLAVSPNDKLLATGSQDRTAKLWALPQCQLLGVFTGHRRGLWNVQFSPTDQVLA 537
Query: 201 TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKE 260
T SAD IK+W + S + E H++ + +A GS L S D + +W +
Sbjct: 538 TASADGTIKLWAL----QDFSCLKTFEGHDASVLKVAFVSRGSQLLSSGSDGLLKLWTIK 593
Query: 261 EDDGNILVVGALRGHTKSI--LCMAVVSDLVCSGSADKTIRIWRGI 304
++ V L H + L + + D +G +D I +W+ +
Sbjct: 594 SNE----CVRTLDAHEDKVWGLHCSQLDDHAITGGSDSRIILWKDV 635
Score = 57 (25.1 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 23/83 (27%), Positives = 34/83 (40%)
Query: 18 HNSYVSSLAL--AGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAVKSLV 75
H + V+S+A L TG D VR WD F + +V +
Sbjct: 108 HTAPVASMAFDATSTLLATGGCDGAVRVWDIVQHYGT--HHFRGSPGVVHLVAFHPDPTR 165
Query: 76 VLADKLFSAHQDHKIRVWKINNQ 98
+L LFS+ D IRVW + ++
Sbjct: 166 LL---LFSSAVDTSIRVWSLQDR 185
>FB|FBgn0036733 [details] [associations]
symbol:U4-U6-60K "U4-U6 small nuclear riboprotein factor 60K"
species:7227 "Drosophila melanogaster" [GO:0005688 "U6 snRNP"
evidence=ISS] [GO:0005687 "U4 snRNP" evidence=ISS] [GO:0008380 "RNA
splicing" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0030532 "small nuclear ribonucleoprotein complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0030621 "U4 snRNA binding" evidence=IDA] [GO:0017070 "U6 snRNA
binding" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0030532
GO:GO:0017070 GO:GO:0030621 InterPro:IPR014906 Pfam:PF08799
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR HSSP:O43172
EMBL:AY061623 RefSeq:NP_648990.1 UniGene:Dm.987 SMR:Q9VVI0
MINT:MINT-295539 STRING:Q9VVI0 EnsemblMetazoa:FBtr0075209
GeneID:39955 KEGG:dme:Dmel_CG6322 UCSC:CG6322-RA CTD:39955
FlyBase:FBgn0036733 InParanoid:Q9VVI0 OrthoDB:EOG4R7SRZ
GenomeRNAi:39955 NextBio:816257 Uniprot:Q9VVI0
Length = 553
Score = 176 (67.0 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 61/232 (26%), Positives = 102/232 (43%)
Query: 136 CTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVAL-- 193
C+ V VS+ A ++D +LL + SW K+W D + L+ H + VAL
Sbjct: 255 CSQVGDTRPVSSAAFSEDSSLLLTSSWSGLCKLWSVPDCE-LKQTLRGHASYVGGVALRP 313
Query: 194 ---SDDGDVY---TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYS 247
+D+ +V +G D +K+W N + S+ D+ ++ +A G L +
Sbjct: 314 GVKADEENVVAMASGGHDGAVKLWGF---NNEESIADITGHMPHRVSKVAFHPSGRFLAT 370
Query: 248 GACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIWRGID 305
D S +W+ E+ +L GH K + C++ SD ++ +G D R+W D
Sbjct: 371 ACYDSSWRLWDLEQKT-EVL---HQEGHAKPVHCLSYHSDGSVLVTGGLDAFGRVW---D 423
Query: 306 -RNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
R C+ LEGH G V + D S + + +GS D K+W +
Sbjct: 424 LRTGRCIMFLEGHLGAVFGV---------DFSPNGFHIATGSQDNTCKIWDL 466
>RGD|621047 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1" species:10116 "Rattus
norvegicus" [GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:621047 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF128241 EMBL:BC087742 IPI:IPI00203832 RefSeq:NP_068525.1
UniGene:Rn.44181 ProteinModelPortal:Q9WUC8 STRING:Q9WUC8
PRIDE:Q9WUC8 Ensembl:ENSRNOT00000009113 GeneID:60376 KEGG:rno:60376
UCSC:RGD:621047 InParanoid:Q9WUC8 NextBio:612055
Genevestigator:Q9WUC8 GermOnline:ENSRNOG00000006655 Uniprot:Q9WUC8
Length = 514
Score = 175 (66.7 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 75/304 (24%), Positives = 134/304 (44%)
Query: 15 LKGHNSYVSSLAL--AGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAVK 72
+ GH +V +A+ ++ TGS+D ++ WD S +L LS ++ +G +
Sbjct: 200 ISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLA--SGKLK---LSLTGHISTVRGVIV 254
Query: 73 SLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLG-DRAIKLLMPKNHVQIR 131
S + LFS +D +++ W + + + L+ + L I +L+ +
Sbjct: 255 S--TRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTA 312
Query: 132 RH---KTCTWVH----HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAH 184
R +T VH H +AV+ + E + + S D TI++W K ++TN H
Sbjct: 313 RIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTN-H 371
Query: 185 DDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSV 244
++ AV L + + IK W+ G + L HN+ IN LA++ DG V
Sbjct: 372 KKSVRAVVLHPLHYTFASGSPDNIKQWKFPDGG----FIQNLSGHNAIINTLAVNTDG-V 426
Query: 245 LYSGACDRSIIVWEKEEDDGNILV-----VGALRGHTKSILCMAVVSDL-VCSGSADKTI 298
L SGA + ++ +W+ V G+L + C S+ + + ADKTI
Sbjct: 427 LVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIFACAFDRSESRLLTAEADKTI 486
Query: 299 RIWR 302
+++R
Sbjct: 487 KVYR 490
Score = 119 (46.9 bits), Expect = 0.00038, P = 0.00038
Identities = 60/262 (22%), Positives = 118/262 (45%)
Query: 14 TLKGHNSYVSSLALAGK--FLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAV 71
+L GH S V + ++ + +L++ D +V+ WD +++ + + + ++ AV G
Sbjct: 241 SLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEY--NKVIRHY--HGHLSAV-YGL- 294
Query: 72 KSLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLGDRAIK--LLMPKNHVQ 129
L D L + +D R+W + + H + T+ +A + ++ +
Sbjct: 295 -DLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTT 353
Query: 130 IR-----RHKT-CTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA 183
IR KT T +H +V A+ L S S D IK W+ D +++++
Sbjct: 354 IRLWDLVAGKTRVTLTNHKKSVRAVVLHPLHYTFASGSPDN-IKQWKFPDGGFIQNLSG- 411
Query: 184 HDDAINAVALSDDGDVYTGSADKKIKVWRRSPG---NKKHSLVDVLERHN-SGINALALS 239
H+ IN +A++ DG + +G+ + + +W G + H+ V + SGI A A
Sbjct: 412 HNAIINTLAVNTDGVLVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIFACAFD 471
Query: 240 CDGSVLYSGACDRSIIVWEKEE 261
S L + D++I V+ ++E
Sbjct: 472 RSESRLLTAEADKTIKVYREDE 493
>POMBASE|SPBC713.04c [details] [associations]
symbol:SPBC713.04c "U3 snoRNP-associated protein Utp1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IDA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0030515 "snoRNA binding" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC713.04c GO:GO:0005829
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 GO:GO:0030515 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0006364 GO:GO:0005732 HOGENOM:HOG000160363
KO:K14558 OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148
PANTHER:PTHR19858 Pfam:PF04003 RefSeq:NP_595343.1
ProteinModelPortal:Q9C1X1 STRING:Q9C1X1 EnsemblFungi:SPBC713.04c.1
GeneID:2541182 KEGG:spo:SPBC713.04c OrthoDB:EOG4350F7
NextBio:20802294 Uniprot:Q9C1X1
Length = 854
Score = 166 (63.5 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 53/176 (30%), Positives = 83/176 (47%)
Query: 183 AHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCD 241
+H DA++ + S DG + TG+ D KIKVW + G + +H S ++ L S
Sbjct: 337 SHYDALSTLQYSSDGQRIITGADDGKIKVWDMNSG----FCIVTFTQHTSAVSGLCFSKR 392
Query: 242 GSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADK-TIRI 300
G+VL+S + D S+ W+ N A S + + ++VC+GS D I +
Sbjct: 393 GNVLFSSSLDGSVRAWDLIRYR-NFRTFTAPSRVQFSCIAVDPSGEIVCAGSQDSFEIFM 451
Query: 301 WRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
W + L L GH GPV L+ +SS + L+ SGS D +++W I
Sbjct: 452 W-SVQTGQL-LETLAGHEGPVSSLSF-------NSSGS--LLASGSWDKTVRIWDI 496
Score = 149 (57.5 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 46/186 (24%), Positives = 85/186 (45%)
Query: 137 TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDD 196
T+ H AVS L +K +L+S S D +++ W ++ + T + +A+
Sbjct: 376 TFTQHTSAVSGLCFSKRGNVLFSSSLDGSVRAWDLIRYRNFRTFTAPSRVQFSCIAVDPS 435
Query: 197 GDVY-TGSADK-KIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSI 254
G++ GS D +I +W G L++ L H +++L+ + GS+L SG+ D+++
Sbjct: 436 GEIVCAGSQDSFEIFMWSVQTGQ----LLETLAGHEGPVSSLSFNSSGSLLASGSWDKTV 491
Query: 255 IVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIWRGIDRNYTCLA 312
+W+ G +V L +L +A D VC S D + W + T L
Sbjct: 492 RIWDIFSRSG---IVEPLP-IPSDVLSLAFHPDGKEVCVASLDGQLTFWNVQEGKQTSL- 546
Query: 313 VLEGHR 318
++G +
Sbjct: 547 -IDGRK 551
Score = 146 (56.5 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 54/220 (24%), Positives = 95/220 (43%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDV- 199
H DA+S L + D + + + D IK+W + C+ + T H A++ + S G+V
Sbjct: 338 HYDALSTLQYSSDGQRIITGADDGKIKVWDMNSGFCIVTFTQ-HTSAVSGLCFSKRGNVL 396
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDR-SIIVWE 258
++ S D ++ W + + + +A+ G ++ +G+ D I +W
Sbjct: 397 FSSSLDGSVRAWDLI---RYRNFRTFTAPSRVQFSCIAVDPSGEIVCAGSQDSFEIFMWS 453
Query: 259 KEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIWRGIDRNYTCLAVLEG 316
+ G +L L GH + ++ S L+ SGS DKT+RIW R+ ++E
Sbjct: 454 VQT--GQLLET--LAGHEGPVSSLSFNSSGSLLASGSWDKTVRIWDIFSRS----GIVEP 505
Query: 317 HRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
P L+ A D + VC SLD + W +
Sbjct: 506 LPIPSDVLSLAFHPDGKE-------VCVASLDGQLTFWNV 538
Score = 57 (25.1 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 136 CTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTS 172
C H + V + +KD+ +Y+VS D + +W+ S
Sbjct: 184 CALTGHKNTVVSGFFSKDQQTIYTVSKDGALFVWKYS 220
>UNIPROTKB|F1Q065 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AAEX03004635 Ensembl:ENSCAFT00000030902 Uniprot:F1Q065
Length = 803
Score = 166 (63.5 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 64/274 (23%), Positives = 125/274 (45%)
Query: 73 SLVVLADKLFSAHQDHKIRVWKINNQEPDHQ--KYTR-LATLPTLGDRAIKLLMPKNHVQ 129
+L A L S DH + +++ + + Q Y+ + + LG +++ N
Sbjct: 296 TLAQSAGLLLSVTTDHNLLLYEARSLQLQKQFAGYSEEVLDVRFLGPEDSHIVVASNSPS 355
Query: 130 IR----RHKTCTWVH-HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESIT--N 182
++ + TC +H H D V AL + + L S + D++I IWR + + + +
Sbjct: 356 LKVFELQTMTCQILHGHTDIVLALDVFRKGRLFASCAKDQSICIWRMNKAGRVACVAQGS 415
Query: 183 AHDDAINAVALSDDGDVY--TGSADKKIKVWR-----RSPGNKKHSLVDVLER------H 229
H ++ + S + + TGS D +K+W S G S +L+ H
Sbjct: 416 GHTHSVGTICCSRLKETFLVTGSQDCTVKLWPIPEALLSKGTAPDSGPILLQAQATQRCH 475
Query: 230 NSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCM--AVVSD 287
+ IN++A++ + +L +G+ DR+ +W + ++G GH + + C+ + +
Sbjct: 476 DKDINSVAVAPNDKLLATGSQDRTAKLWALP----HCQLLGIFSGHRRGLWCVQFSPMDQ 531
Query: 288 LVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPV 321
++ + SAD TI++W D ++CL EGH V
Sbjct: 532 VLATASADGTIKLWALQD--FSCLKTFEGHDASV 563
Score = 116 (45.9 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 49/199 (24%), Positives = 83/199 (41%)
Query: 154 ETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTG---SADKKIKV 210
+ +L + S D TIK+W DF CL++ HD ++ V G +D +K+
Sbjct: 530 DQVLATASADGTIKLWALQDFSCLKTF-EGHDASVLKVVFVSRGTQLLSRPSGSDGLVKL 588
Query: 211 WRRSPGNKKHSLVDVLERHNSGINALALS-CDGSVLYSGACDRSIIVWEK--EEDDGNIL 267
W K + V L+ H + L S D L +GA D +I+W+ EE+
Sbjct: 589 WTI----KNNECVKTLDAHEDKVWGLHCSRLDDRAL-TGASDSCVILWKDVTEEEQSE-- 641
Query: 268 VVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEG-HRGPVKC--L 324
A R + ++ + +L+ + + + +DR +T L V++ R P C L
Sbjct: 642 -EQARR--EEEVVKQQELDNLLYEKRYLRALGLAISLDRPHTVLTVIQAIRRDPEACKKL 698
Query: 325 AAAIDNDRCDSSDTSYLVC 343
A + R D + C
Sbjct: 699 GATVLRLRRDQKEALLRFC 717
Score = 90 (36.7 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 21/57 (36%), Positives = 30/57 (52%)
Query: 156 LLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSA-DKKIKVW 211
LL+S + D TI++W D CL +T AH A+ ++ S DG S DK +W
Sbjct: 164 LLFSSAADATIRMWSLQDQSCLAVMT-AHYSAVTSLTFSADGHTMLSSGRDKICVIW 219
Score = 86 (35.3 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 28/89 (31%), Positives = 43/89 (48%)
Query: 272 LRGHTKSILCMAVVSD--LVCSGSADKTIRIWRGIDR--NYTCLAVLEGHRGPVKCLAAA 327
L GHT +L + V L S + D++I IWR +++ C+A GH V +
Sbjct: 369 LHGHTDIVLALDVFRKGRLFASCAKDQSICIWR-MNKAGRVACVAQGSGHTHSVGTIC-- 425
Query: 328 IDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
C ++LV +GS DC +K+W I
Sbjct: 426 -----CSRLKETFLV-TGSQDCTVKLWPI 448
Score = 56 (24.8 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 24/95 (25%), Positives = 39/95 (41%)
Query: 5 SVVDHHCLTTLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTF-SSELDQEFLSNN 61
S+ D CL + H S V+SL + G + + D WD + ++ F S
Sbjct: 178 SLQDQSCLAVMTAHYSAVTSLTFSADGHTMLSSGRDKICVIWDLQSHQATRTVPVFESVE 237
Query: 62 NIVAVGKGAVKSLVVLADKL--FSAHQDHKIRVWK 94
V + + V L V + L +A +RVW+
Sbjct: 238 AAVLLPEELVPKLDVKSKGLHFLTAGDQGLLRVWE 272
Score = 55 (24.4 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 22/83 (26%), Positives = 34/83 (40%)
Query: 18 HNSYVSSLAL--AGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAVKSLV 75
H + V+++A L TG D VR WD F + +V +
Sbjct: 105 HTAPVATMAFDPTSTLLATGGCDGAVRVWDIVRHYGT--HHFRGSPGVVHLVTFHPDPAR 162
Query: 76 VLADKLFSAHQDHKIRVWKINNQ 98
+L LFS+ D IR+W + +Q
Sbjct: 163 LL---LFSSAADATIRMWSLQDQ 182
Score = 51 (23.0 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 11 CLTTLKGHNSYVSSLA---LAGKFLYTGSSDNEVRSW 44
C+ GH V ++ L FL TGS D V+ W
Sbjct: 410 CVAQGSGHTHSVGTICCSRLKETFLVTGSQDCTVKLW 446
>RGD|1359296 [details] [associations]
symbol:Wdsub1 "WD repeat, sterile alpha motif and U-box domain
containing 1" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 RGD:1359296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ CTD:151525 OMA:HCCCFSP EMBL:BC089856
IPI:IPI00391796 RefSeq:NP_001014201.1 UniGene:Rn.101918
ProteinModelPortal:Q5FVN8 PRIDE:Q5FVN8 Ensembl:ENSRNOT00000008168
GeneID:362137 KEGG:rno:362137 UCSC:RGD:1359296 InParanoid:Q5FVN8
NextBio:678784 ArrayExpress:Q5FVN8 Genevestigator:Q5FVN8
Uniprot:Q5FVN8
Length = 476
Score = 174 (66.3 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 65/231 (28%), Positives = 102/231 (44%)
Query: 137 TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCL-ESITNAHDDAINAVALSD 195
T H D VS A + TLL + S D+TI+++ SDF L S H A++ + S
Sbjct: 7 TLADHGDDVSCCAFSS--TLLATCSLDKTIRLYSLSDFAELPHSPLKFHTYAVHCCSFSP 64
Query: 196 DGDVYTG-SADKKIKVWRRSPGNKKHSLVDVLERHN-SGINALALSCDGSVLYSGACDRS 253
G V S D +W G H+L VLE+ S + S D + L SGA D S
Sbjct: 65 SGHVLASCSTDGTTVLWSAHSG---HTLT-VLEQPGGSPVRVCCFSPDSTYLASGAADGS 120
Query: 254 IIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIWRGIDRNYTCL 311
+++W + G+++ S++ A D L+ +GS+ + +W D CL
Sbjct: 121 VVLWNAHSY--KLYRCGSVKD--SSLVACAFSPDGGLLVTGSSGGDLTVW---DDRMRCL 173
Query: 312 AVLEGHRGPVKCLAAAIDN-DRCDSSDTSYLVCSGSLDCDIKVWQISFPLV 361
+ H + C + + + Y + S DC+IK+W +SF V
Sbjct: 174 HSEKAHDLGITCCSFSSQPLSGGEHGLQLYRLASCGQDCEIKLWVVSFTRV 224
Score = 133 (51.9 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 82/324 (25%), Positives = 133/324 (41%)
Query: 14 TLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAVKS 73
TL H VS A + L T S D +R + + F+ + V +
Sbjct: 7 TLADHGDDVSCCAFSSTLLATCSLDKTIRLYSLSDFAELPHSPLKFHTYAVHCCSFSPSG 66
Query: 74 LVVLADK------LFSAHQDHKIRVWKINNQEPDHQK-YTRLATLPTLGDRAIKLLMPKN 126
V+ + L+SAH H + V + P ++ +T G +++
Sbjct: 67 HVLASCSTDGTTVLWSAHSGHTLTVLEQPGGSPVRVCCFSPDSTYLASGAADGSVVLWNA 126
Query: 127 HVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDD 186
H + ++ C V V A A + D LL + S + +W +CL S AHD
Sbjct: 127 H-SYKLYR-CGSVKDSSLV-ACAFSPDGGLLVTGSSGGDLTVW-DDRMRCLHS-EKAHDL 181
Query: 187 AINAVALSDD----GD----VYTGSA---DKKIKVW----RRSPGNK-KHSLVDVLERHN 230
I + S G+ +Y ++ D +IK+W R G + K+ L H
Sbjct: 182 GITCCSFSSQPLSGGEHGLQLYRLASCGQDCEIKLWVVSFTRVLGFELKYR--STLSGHC 239
Query: 231 SGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--L 288
+ + A A S DG +L SG+ D+S+I++ D G V+ L HT+ + A + L
Sbjct: 240 APVLACAFSHDGQMLASGSVDKSVIIY----DIGTQSVLHTLTQHTRYVTTCAFAPNTLL 295
Query: 289 VCSGSADKTIRIWRGIDRNYTCLA 312
+ +GS DKT+ IW+ D C A
Sbjct: 296 LATGSMDKTVNIWQ-FDLETPCQA 318
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 171 (65.3 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 56/219 (25%), Positives = 99/219 (45%)
Query: 155 TLLYSVSWDRTIKIW--RTSDFKCLESITNAHDDAINAVALSDDGDVYTG-SADKKIKVW 211
+++ S S D TIK+W T DF E H D++ ++ G + SAD IK+W
Sbjct: 56 SVMVSASEDATIKVWDYETGDF---ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLW 112
Query: 212 RRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGA 271
+ + + H+ ++++A+ +G + S + D++I +WE + V
Sbjct: 113 ----DFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTG----YCVKT 164
Query: 272 LRGHTKSILCMAVVSD--LVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAID 329
GH + + + D L+ S S D+T+R+W + C A L H V+C++ A +
Sbjct: 165 FTGHREWVRMVRPNQDGTLIASCSNDQTVRVW--VVATKECKAELREHEHVVECISWAPE 222
Query: 330 ND-----RCDSSDTSY------LVCSGSLDCDIKVWQIS 357
+ S+T + SGS D IK+W +S
Sbjct: 223 SSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 261
Score = 163 (62.4 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 53/196 (27%), Positives = 90/196 (45%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD-V 199
H D+V ++ LL S S D TIK+W F+C+ ++ + HD +++VA+ +GD +
Sbjct: 84 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTM-HGHDHNVSSVAIMPNGDHI 142
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVW-- 257
+ S DK IK+W G V H + + + DG+++ S + D+++ VW
Sbjct: 143 VSASRDKTIKMWEVQTGY----CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 198
Query: 258 -------EKEEDDGNILVVGALRGHTKSILCMAVVSD---------LVCSGSADKTIRIW 301
E E + + + + S + A S+ + SGS DKTI++W
Sbjct: 199 ATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 258
Query: 302 RGIDRNYTCLAVLEGH 317
+ CL L GH
Sbjct: 259 -DVSTGM-CLMTLVGH 272
Score = 137 (53.3 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 61/234 (26%), Positives = 104/234 (44%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H VS++A+ + + S S D+TIK+W C+++ T H + + V + DG +
Sbjct: 126 HDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG-HREWVRMVRPNQDGTLI 184
Query: 201 TG-SADKKIKVW----RRSPGN-KKHS-LVDVL----ERHNSGINALALS------CDGS 243
S D+ ++VW + ++H +V+ + E S I+ S G
Sbjct: 185 ASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGP 244
Query: 244 VLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIW 301
L SG+ D++I +W+ G L+ L GH + + S + S + DKT+R+W
Sbjct: 245 FLLSGSRDKTIKMWDVST--GMCLMT--LVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 300
Query: 302 RGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQ 355
+N C+ L H V L D T+ V +GS+D +KVW+
Sbjct: 301 DY--KNKRCMKTLNAHEHFVTSL---------DFHKTAPYVVTGSVDQTVKVWE 343
>DICTYBASE|DDB_G0275045 [details] [associations]
symbol:gpbB "Guanine nucleotide-binding protein
subunit beta-like protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275045 GO:GO:0045335
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 KO:K14753 OMA:IRVWQVM
EMBL:U27537 RefSeq:XP_643839.1 ProteinModelPortal:P46800 SMR:P46800
IntAct:P46800 STRING:P46800 SWISS-2DPAGE:P46800 PRIDE:P46800
EnsemblProtists:DDB0185122 GeneID:8619886 KEGG:ddi:DDB_G0275045
Uniprot:P46800
Length = 329
Score = 170 (64.9 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 66/261 (25%), Positives = 113/261 (43%)
Query: 14 TLKGHNSYVSSLALAGK---FLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGA 70
+L GHN +V+S+A++ + + + S D V W ++ ++ ++
Sbjct: 16 SLVGHNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTP--TDATSPGKAHRSLKGHSH-F 72
Query: 71 VKSLVVLADKLF--SAHQDHKIRVWKINNQEPDH--QKYTRLATLPTLGDRAIKLLMPKN 126
V+ +V+ D F S D+ +R+W I + +T+ +++
Sbjct: 73 VQDVVISHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSDNRQIISGSR 132
Query: 127 HVQIRRHKT---CTWV-----HHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLE 178
I+ T C + H D VS + + + + S SWD +KIW FKC
Sbjct: 133 DATIKVWNTLGECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIWDIKSFKCNH 192
Query: 179 SITNAHDDAINAVALSDDGDVY-TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALA 237
++T+ H +N V +S DG + +G D +W S G + L E N+ INALA
Sbjct: 193 TLTD-HTGYVNTVTISPDGSLCASGGKDTFACLWELSSGKPLYKL----EARNT-INALA 246
Query: 238 LSCDGSVLYSGACDRSIIVWE 258
S + L S A D II+W+
Sbjct: 247 FSPNKYWL-SAATDDKIIIWD 266
Score = 159 (61.0 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 51/185 (27%), Positives = 89/185 (48%)
Query: 184 HDDAINAVALSDDGD--VYTGSADKKIKVWRRSPGN-----KKHSLVDVLERHNSGINAL 236
H+ + ++A+S + + + S DK + VW+ +P + K H L+ H+ + +
Sbjct: 20 HNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHRS---LKGHSHFVQDV 76
Query: 237 ALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSA 294
+S DG SG+ D ++ +W+ + L +GHT+ ++ +A SD + SGS
Sbjct: 77 VISHDGQFALSGSWDNTLRLWDITKGVSTRL----FKGHTQDVMSVAFSSDNRQIISGSR 132
Query: 295 DKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVW 354
D TI++W + L E H+ V C+ S +T +V SGS D +K+W
Sbjct: 133 DATIKVWNTLGECKFTLEGPEAHQDWVSCIRF--------SPNTPTIV-SGSWDNKVKIW 183
Query: 355 QI-SF 358
I SF
Sbjct: 184 DIKSF 188
Score = 149 (57.5 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 53/216 (24%), Positives = 95/216 (43%)
Query: 139 VHHVDAVSALALTKD--ETLLYSVSWDRTIKIWR------TSDFKCLESITNAHDDAINA 190
V H V+++A++ + +T++ S S D+T+ +W+ TS K S+ H +
Sbjct: 18 VGHNGFVTSIAVSPENPDTIISS-SRDKTVMVWQLTPTDATSPGKAHRSL-KGHSHFVQD 75
Query: 191 VALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGA 249
V +S DG +GS D +++W + G + + H + ++A S D + SG+
Sbjct: 76 VVISHDGQFALSGSWDNTLRLWDITKGVSTR----LFKGHTQDVMSVAFSSDNRQIISGS 131
Query: 250 CDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDL--VCSGSADKTIRIWRGIDRN 307
D +I VW + + G H + C+ + + SGS D ++IW I ++
Sbjct: 132 RDATIKVWNTL-GECKFTLEGP-EAHQDWVSCIRFSPNTPTIVSGSWDNKVKIW-DI-KS 187
Query: 308 YTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVC 343
+ C L H G V + + D C S C
Sbjct: 188 FKCNHTLTDHTGYVNTVTISPDGSLCASGGKDTFAC 223
Score = 117 (46.2 bits), Expect = 0.00031, P = 0.00031
Identities = 67/270 (24%), Positives = 117/270 (43%)
Query: 14 TLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNT-FSSELDQEFLSNNNIVAVGKGA 70
+LKGH+ +V + ++ G+F +GS DN +R WD S+ L + ++++V +
Sbjct: 65 SLKGHSHFVQDVVISHDGQFALSGSWDNTLRLWDITKGVSTRLFKGH--TQDVMSVAFSS 122
Query: 71 VKSLVVLADKLFSAHQDHKIRVWKINNQEPD-HQKYT---RLA-TLPTL--G--DRAIKL 121
++ + + + + K + P+ HQ + R + PT+ G D +K+
Sbjct: 123 DNRQIISGSRDATIKVWNTLGECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKI 182
Query: 122 LMPKNHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESIT 181
K+ + + T T H V+ + ++ D +L S D +W S K L +
Sbjct: 183 WDIKS---FKCNHTLT--DHTGYVNTVTISPDGSLCASGGKDTFACLWELSSGKPLYKL- 236
Query: 182 NAHDDAINAVALSDDGDVYTGSADKKIKVW--------RRSPGNKKHSLVDVLERHNSGI 233
A + INA+A S + + + D KI +W K D ++ S
Sbjct: 237 EARN-TINALAFSPNKYWLSAATDDKIIIWDLLTKQVLAEIVPEVKEQAFDSKKKKESKP 295
Query: 234 NA-----LALSCDGSVLYSGACDRSIIVWE 258
A LA S DGSVLY+G D I V++
Sbjct: 296 KAPACLSLAWSADGSVLYAGYNDGLIRVYK 325
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 172 (65.6 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 56/214 (26%), Positives = 98/214 (45%)
Query: 155 TLLYSVSWDRTIKIWRTSDFKC--LESITNAHDDAINAVALSDDG-DVYTGSADKKIKVW 211
T++ S S D TIK+W D++ LE H DA+N +A+ G + + S+D IK+W
Sbjct: 119 TIMASCSEDATIKVW---DYETGQLERTLKGHTDAVNDIAIDAAGKQLVSCSSDLSIKLW 175
Query: 212 RRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGA 271
+ + + L+ H ++++ G + S + D +I W D V
Sbjct: 176 ---DFGQTYDCLKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQW----DISTGYCVYT 228
Query: 272 LRGHTKSILCMAVVSD--LVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAID 329
RGH + + + +D L S S D+T+ +W ++ VL H V+C+ A D
Sbjct: 229 FRGHNDWVRMIRISNDGTLFASASLDQTVTVWSFATKS--AKLVLRDHEHAVECVEWAPD 286
Query: 330 NDRCD------SSDTSYLVCSGSLDCDIKVWQIS 357
+ ++++++ SGS D IK W I+
Sbjct: 287 TAYTNVTGQQPEGNSTHILFSGSRDRSIKAWNIN 320
Score = 155 (59.6 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 60/229 (26%), Positives = 99/229 (43%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H VS++ + S S D TIK W S C+ + H+D + + +S+DG ++
Sbjct: 190 HEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTGYCVYTF-RGHNDWVRMIRISNDGTLF 248
Query: 201 -TGSADKKIKVWRRSPGNKK-----HS-LVDVLE--RHNSGINALALSCDGS---VLYSG 248
+ S D+ + VW + + K H V+ +E + N +G+ +L+SG
Sbjct: 249 ASASLDQTVTVWSFATKSAKLVLRDHEHAVECVEWAPDTAYTNVTGQQPEGNSTHILFSG 308
Query: 249 ACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAV--VSDLVCSGSADKTIRIWRGIDR 306
+ DRSI W D V+ L H + +A + S + DKT+R+W +
Sbjct: 309 SRDRSIKAWNINTGD----VLFTLLAHENWVRGLAFHPKGKYLISVADDKTLRVWELSAQ 364
Query: 307 NYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQ 355
C+ +E H V +A TS V +GS+D KVW+
Sbjct: 365 R--CMKAIEAHEHFVSTVAF---------HQTSPFVITGSVDMSCKVWE 402
Score = 154 (59.3 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 61/236 (25%), Positives = 102/236 (43%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSD-FKCLESITNAHDDAINAVALSDDGD- 198
H DAV+ +A+ L S S D +IK+W + CL+S+ H+ +++V GD
Sbjct: 147 HTDAVNDIAIDAAGKQLVSCSSDLSIKLWDFGQTYDCLKSL-KGHEHTVSSVTFLPTGDF 205
Query: 199 VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWE 258
V + S D IK W S G V HN + + +S DG++ S + D+++ VW
Sbjct: 206 VLSASRDHTIKQWDISTGY----CVYTFRGHNDWVRMIRISNDGTLFASASLDQTVTVWS 261
Query: 259 KEEDDGNILVVGALRGHTKSILCMAVVSD-----------------LVCSGSADKTIRIW 301
++ LR H ++ C+ D ++ SGS D++I+ W
Sbjct: 262 FATKSAKLV----LRDHEHAVECVEWAPDTAYTNVTGQQPEGNSTHILFSGSRDRSIKAW 317
Query: 302 RGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQIS 357
I+ +L H V+ LA YL+ S + D ++VW++S
Sbjct: 318 N-INTGDVLFTLL-AHENWVRGLAF--------HPKGKYLI-SVADDKTLRVWELS 362
Score = 110 (43.8 bits), Expect = 8.9e-08, Sum P(2) = 8.9e-08
Identities = 50/202 (24%), Positives = 83/202 (41%)
Query: 29 GKFLYTGSSDNEVRSWDCNT------FSSELD---QEFLSNNNIVAVGKGAVKSLVVLAD 79
G F+ + S D+ ++ WD +T F D +SN+ + +++ V +
Sbjct: 203 GDFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRISNDGTLFASASLDQTVTVWSF 262
Query: 80 KLFSAH---QDHKIRVWKINNQEPDHQKYTRLATLPTLGDRAIKLLMPKNHVQIRRHKT- 135
SA +DH+ V + PD YT + G+ L I+
Sbjct: 263 ATKSAKLVLRDHEHAVECVE-WAPD-TAYTNVTGQQPEGNSTHILFSGSRDRSIKAWNIN 320
Query: 136 -----CTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINA 190
T + H + V LA L SV+ D+T+++W S +C+++I AH+ ++
Sbjct: 321 TGDVLFTLLAHENWVRGLAFHPKGKYLISVADDKTLRVWELSAQRCMKAI-EAHEHFVST 379
Query: 191 VALSDDGD-VYTGSADKKIKVW 211
VA V TGS D KVW
Sbjct: 380 VAFHQTSPFVITGSVDMSCKVW 401
Score = 84 (34.6 bits), Expect = 8.9e-08, Sum P(2) = 8.9e-08
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 9 HHCLTTLKGHNSYVSSLAL--AGKFLYTGSSDNEVRSWDCNT 48
+ CL +LKGH VSS+ G F+ + S D+ ++ WD +T
Sbjct: 181 YDCLKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDIST 222
>ZFIN|ZDB-GENE-030131-823 [details] [associations]
symbol:gnb1a "guanine nucleotide binding protein (G
protein), beta polypeptide 1a" species:7955 "Danio rerio"
[GO:0007165 "signal transduction" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-030131-823 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC056708 EMBL:BC071277 IPI:IPI00506088
RefSeq:NP_997774.1 UniGene:Dr.75526 ProteinModelPortal:Q6PH57
SMR:Q6PH57 STRING:Q6PH57 PRIDE:Q6PH57 Ensembl:ENSDART00000130104
GeneID:322104 KEGG:dre:322104 CTD:322104 InParanoid:Q6PH57
NextBio:20807673 Bgee:Q6PH57 Uniprot:Q6PH57
Length = 340
Score = 170 (64.9 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 48/171 (28%), Positives = 81/171 (47%)
Query: 134 KTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVAL 193
+T T+ H V +L+L D L S + D + K+W + C ++ T H+ INA+
Sbjct: 176 QTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTG-HESDINAICF 234
Query: 194 SDDGDVY-TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDR 252
+G+ + TGS D +++ + +V + GI ++A S G +L +G D
Sbjct: 235 FPNGNAFATGSDDATCRLFDLRADQEL--MVYSHDNIICGITSVAFSKSGRLLLAGYDDF 292
Query: 253 SIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIW 301
+ VW+ + D G L GH + C+ V D V +GS D ++IW
Sbjct: 293 NCNVWDALKADR----AGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 123 (48.4 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 41/164 (25%), Positives = 68/164 (41%)
Query: 194 SDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRS 253
+D + + S D K+ +W NK H++ +S + A + G+ + G D
Sbjct: 65 TDSRLLVSASQDGKLIIWDSYTTNKVHAI----PLRSSWVMTCAYAPSGNYVACGGLDNI 120
Query: 254 IIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD-LVCSGSADKTIRIWRGIDRNYTCLA 312
++ + +GN+ V L GHT + C + D + + S D T +W I+
Sbjct: 121 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALW-DIETGQQT-T 178
Query: 313 VLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
GH G V L+ A DT V SG+ D K+W +
Sbjct: 179 TFAGHTGDVMSLSLA--------PDTRLFV-SGACDASAKLWDV 213
>MGI|MGI:1858197 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1, PRL1 homolog
(Arabidopsis)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1858197 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB EMBL:AF044334 EMBL:AK075993 EMBL:AK076007
EMBL:AK077197 EMBL:BC006750 EMBL:BC052895 IPI:IPI00331172
RefSeq:NP_058064.2 UniGene:Mm.286349 ProteinModelPortal:Q922V4
SMR:Q922V4 STRING:Q922V4 PhosphoSite:Q922V4 PaxDb:Q922V4
PRIDE:Q922V4 Ensembl:ENSMUST00000150268 GeneID:53317 KEGG:mmu:53317
UCSC:uc008ppi.1 InParanoid:Q922V4 NextBio:310109 Bgee:Q922V4
Genevestigator:Q922V4 GermOnline:ENSMUSG00000027998 Uniprot:Q922V4
Length = 513
Score = 173 (66.0 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 75/306 (24%), Positives = 134/306 (43%)
Query: 15 LKGHNSYVSSLAL--AGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAVK 72
+ GH +V +A+ ++ TGS+D ++ WD S +L LS ++ +G +
Sbjct: 199 ISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLA--SGKLK---LSLTGHISTVRGVIV 253
Query: 73 SLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATL------PTLGDRAIKLLMPKN 126
S + LFS +D +++ W + + + L+ + PTL + +
Sbjct: 254 S--TRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTLD--VLVTCSRDS 309
Query: 127 HVQIRRHKTCTWVH----HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITN 182
+I +T VH H +AV+ + E + + S D TI++W K ++TN
Sbjct: 310 TARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTN 369
Query: 183 AHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDG 242
H ++ AV L + + IK W+ G + L HN+ IN LA++ DG
Sbjct: 370 -HKKSVRAVVLHPLLYTFASGSPDNIKQWKFPDGG----FIQNLSGHNAIINTLAVNADG 424
Query: 243 SVLYSGACDRSIIVWEKEEDDGNILV-----VGALRGHTKSILCMAVVSDL-VCSGSADK 296
VL SGA + ++ +W+ V G+L + C S+ + + ADK
Sbjct: 425 -VLVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIFACAFDRSESRLLTAEADK 483
Query: 297 TIRIWR 302
TI+++R
Sbjct: 484 TIKVYR 489
Score = 118 (46.6 bits), Expect = 0.00049, P = 0.00049
Identities = 60/264 (22%), Positives = 120/264 (45%)
Query: 14 TLKGHNSYVSSLALAGK--FLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAV 71
+L GH S V + ++ + +L++ D +V+ WD +++ + + + ++ AV G
Sbjct: 240 SLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEY--NKVIRHY--HGHLSAV-YGL- 293
Query: 72 KSLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLGDRAIK--LLMPKNHVQ 129
L D L + +D R+W + + H + T+ +A + ++ +
Sbjct: 294 -DLHPTLDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTT 352
Query: 130 IR-----RHKT-CTWVHHVDAVSALALTKDETLLYSVSWDR--TIKIWRTSDFKCLESIT 181
IR KT T +H +V A+ L LLY+ + IK W+ D +++++
Sbjct: 353 IRLWDLVAGKTRVTLTNHKKSVRAVVL---HPLLYTFASGSPDNIKQWKFPDGGFIQNLS 409
Query: 182 NAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPG---NKKHSLVDVLERHN-SGINALA 237
H+ IN +A++ DG + +G+ + + +W G + H+ V + SGI A A
Sbjct: 410 G-HNAIINTLAVNADGVLVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIFACA 468
Query: 238 LSCDGSVLYSGACDRSIIVWEKEE 261
S L + D++I V+ ++E
Sbjct: 469 FDRSESRLLTAEADKTIKVYREDE 492
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 173 (66.0 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 90/358 (25%), Positives = 153/358 (42%)
Query: 14 TLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAV 71
TLKGH ++V ++ + G+ + TGS DN +R WD + L ++ +
Sbjct: 181 TLKGHYNWVLCVSWSPDGEVIATGSMDNTIRLWDPKSGQC-LGDALRGHSKWITSLSWEP 239
Query: 72 KSLVVLADK--LFSAHQDHKIRVWKINNQEPDHQK--YTRLATLPTLGDRAIKLLMPKNH 127
LV K L S+ +D I++W ++ + +T + G + LL +H
Sbjct: 240 IHLVKPGSKPRLASSSKDGTIKIWDTVSRVCQYTMSGHTNSVSCVKWGGQG--LLYSGSH 297
Query: 128 VQ------IRRHKTCTWV--HHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLES 179
+ I C + H V+ L+L+ D L ++D T K T + ++
Sbjct: 298 DRTVRVWDINSQGRCINILKSHAHWVNHLSLSTDYALRIG-AFDHTGKKPSTPEEAQKKA 356
Query: 180 ITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALS 239
+ N ++ S++ V T S D + +W K + + H +N +A S
Sbjct: 357 LEN-YEKICKKNGNSEEMMV-TASDDYTMFLWNPLKSTKP---IARMTGHQKLVNHVAFS 411
Query: 240 CDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKT 297
DG + S + D SI +W+ DG + RGH S+ +A SD L+ S S D T
Sbjct: 412 PDGRYIVSASFDNSIKLWDGR--DGKF--ISTFRGHVASVYQVAWSSDCRLLVSCSKDTT 467
Query: 298 IRIWRGIDRNYTCLAV-LEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVW 354
+++W D L+V L GH+ V + ++D R VCSG D +++W
Sbjct: 468 LKVW---DVRTRKLSVDLPGHKDEVYTVDWSVDGKR---------VCSGGKDKMVRLW 513
Score = 158 (60.7 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 77/315 (24%), Positives = 129/315 (40%)
Query: 11 CL-TTLKGHNSYVSSLALA-------GKF--LYTGSSDNEVRSWDCNTFSSELDQEFLSN 60
CL L+GH+ +++SL+ G L + S D ++ WD T S +
Sbjct: 220 CLGDALRGHSKWITSLSWEPIHLVKPGSKPRLASSSKDGTIKIWD--TVSRVCQYTMSGH 277
Query: 61 NNIVAVGKGAVKSLVVLADKLFSAHQDHKIRVWKINNQE------PDHQKYTRLATLPTL 114
N V+ K + L L+S D +RVW IN+Q H + +L T
Sbjct: 278 TNSVSCVKWGGQGL------LYSGSHDRTVRVWDINSQGRCINILKSHAHWVNHLSLST- 330
Query: 115 GDRAIKLLMPKNHVQIRRHKTCTWVHHVDAVSALALTK----DETLLYSVSWDRTIKIWR 170
D A+++ +H ++ T + + K E ++ + S D T+ +W
Sbjct: 331 -DYALRI-GAFDHTG-KKPSTPEEAQKKALENYEKICKKNGNSEEMMVTASDDYTMFLWN 387
Query: 171 T-SDFKCLESITNAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLER 228
K + +T H +N VA S DG + + S D IK+W G +
Sbjct: 388 PLKSTKPIARMTG-HQKLVNHVAFSPDGRYIVSASFDNSIKLWDGRDGK----FISTFRG 442
Query: 229 HNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCM--AVVS 286
H + + +A S D +L S + D ++ VW+ ++ L GH + + +V
Sbjct: 443 HVASVYQVAWSSDCRLLVSCSKDTTLKVWDVRTRKLSV----DLPGHKDEVYTVDWSVDG 498
Query: 287 DLVCSGSADKTIRIW 301
VCSG DK +R+W
Sbjct: 499 KRVCSGGKDKMVRLW 513
Score = 141 (54.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 78/338 (23%), Positives = 142/338 (42%)
Query: 13 TTLKGHNSYVSSLALA---GKFLYTGSSDNEVRSWDCNT----------FSSELDQEFLS 59
+ + GH S + A A + TG+ DN R WDC+T ++ L +
Sbjct: 137 SAIAGHGSTILCSAFAPHTSSRMVTGAGDNTARIWDCDTQTPMHTLKGHYNWVLCVSWSP 196
Query: 60 NNNIVAVGKGAVKSLVVLADK-----LFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTL 114
+ ++A G ++ + + L D L A + H + ++ EP H + + P L
Sbjct: 197 DGEVIATG--SMDNTIRLWDPKSGQCLGDALRGHSKWITSLS-WEPIH--LVKPGSKPRL 251
Query: 115 GDRAIKLLMPKNHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWR-TSD 173
+ K K + R T H ++VS + + LLYS S DRT+++W S
Sbjct: 252 ASSS-KDGTIKIWDTVSRVCQYTMSGHTNSVSCVKWG-GQGLLYSGSHDRTVRVWDINSQ 309
Query: 174 FKCLESITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGI 233
+C+ +I +H +N ++LS D + G+ D K P + + LE +
Sbjct: 310 GRCI-NILKSHAHWVNHLSLSTDYALRIGAFDHTGK----KPSTPEEAQKKALENYEKIC 364
Query: 234 NALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCS 291
S + ++ + + D ++ +W + I + GH K + +A D + S
Sbjct: 365 KKNGNSEE--MMVTASDDYTMFLWNPLKSTKPI---ARMTGHQKLVNHVAFSPDGRYIVS 419
Query: 292 GSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAID 329
S D +I++W G D + ++ GH V +A + D
Sbjct: 420 ASFDNSIKLWDGRDGKF--ISTFRGHVASVYQVAWSSD 455
Score = 135 (52.6 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 60/220 (27%), Positives = 97/220 (44%)
Query: 151 TKDE-TLLYSVSWDRTIK-IWRTSDFKCLESITNAHDDAI--NAVALSDDGDVYTGSADK 206
T+D+ TLLY+ +K + R+S S H I +A A + TG+ D
Sbjct: 113 TEDQITLLYTPRAVFKVKPVTRSS------SAIAGHGSTILCSAFAPHTSSRMVTGAGDN 166
Query: 207 KIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNI 266
++W H+L + H + + ++ S DG V+ +G+ D +I +W+ + G
Sbjct: 167 TARIWDCDTQTPMHTL----KGHYNWVLCVSWSPDGEVIATGSMDNTIRLWDPKS--GQC 220
Query: 267 LVVGALRGHTKSILCMA-----VVSD----LVCSGSADKTIRIWRGIDRNYTCLAVLEGH 317
L ALRGH+K I ++ +V + S S D TI+IW + R C + GH
Sbjct: 221 LG-DALRGHSKWITSLSWEPIHLVKPGSKPRLASSSKDGTIKIWDTVSR--VCQYTMSGH 277
Query: 318 RGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQIS 357
V C+ L+ SGS D ++VW I+
Sbjct: 278 TNSVSCVKWGGQG----------LLYSGSHDRTVRVWDIN 307
Score = 85 (35.0 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 18/43 (41%), Positives = 24/43 (55%)
Query: 7 VDHHCLTTLKGHNSYVSSLALAGK-FLYTGSSDNEVRSWDCNT 48
V C T+ GH + VS + G+ LY+GS D VR WD N+
Sbjct: 266 VSRVCQYTMSGHTNSVSCVKWGGQGLLYSGSHDRTVRVWDINS 308
Score = 75 (31.5 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 27/90 (30%), Positives = 41/90 (45%)
Query: 269 VGALRGHTKSILCMAVVSD--LVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAA 326
+ + GH K + +A D + S S D +I++W G D + ++ GH V +A
Sbjct: 395 IARMTGHQKLVNHVAFSPDGRYIVSASFDNSIKLWDGRDGKF--ISTFRGHVASVYQVAW 452
Query: 327 AIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
SSD LV S S D +KVW +
Sbjct: 453 --------SSDCRLLV-SCSKDTTLKVWDV 473
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 171 (65.3 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 56/219 (25%), Positives = 99/219 (45%)
Query: 155 TLLYSVSWDRTIKIW--RTSDFKCLESITNAHDDAINAVALSDDGDVYTG-SADKKIKVW 211
+++ S S D TIK+W T DF E H D++ ++ G + SAD IK+W
Sbjct: 121 SVMVSASEDATIKVWDYETGDF---ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLW 177
Query: 212 RRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGA 271
+ + + H+ ++++A+ +G + S + D++I +WE + V
Sbjct: 178 ----DFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTG----YCVKT 229
Query: 272 LRGHTKSILCMAVVSD--LVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAID 329
GH + + + D L+ S S D+T+R+W + C A L H V+C++ A +
Sbjct: 230 FTGHREWVRMVRPNQDGTLIASCSNDQTVRVW--VVATKECKAELREHEHVVECISWAPE 287
Query: 330 ND-----RCDSSDTSY------LVCSGSLDCDIKVWQIS 357
+ S+T + SGS D IK+W +S
Sbjct: 288 SSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 326
Score = 163 (62.4 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 53/196 (27%), Positives = 90/196 (45%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD-V 199
H D+V ++ LL S S D TIK+W F+C+ ++ + HD +++VA+ +GD +
Sbjct: 149 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTM-HGHDHNVSSVAIMPNGDHI 207
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVW-- 257
+ S DK IK+W G V H + + + DG+++ S + D+++ VW
Sbjct: 208 VSASRDKTIKMWEVQTGY----CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263
Query: 258 -------EKEEDDGNILVVGALRGHTKSILCMAVVSD---------LVCSGSADKTIRIW 301
E E + + + + S + A S+ + SGS DKTI++W
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Query: 302 RGIDRNYTCLAVLEGH 317
+ CL L GH
Sbjct: 324 -DVSTGM-CLMTLVGH 337
Score = 137 (53.3 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 61/234 (26%), Positives = 104/234 (44%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H VS++A+ + + S S D+TIK+W C+++ T H + + V + DG +
Sbjct: 191 HDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG-HREWVRMVRPNQDGTLI 249
Query: 201 TG-SADKKIKVW----RRSPGN-KKHS-LVDVL----ERHNSGINALALS------CDGS 243
S D+ ++VW + ++H +V+ + E S I+ S G
Sbjct: 250 ASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGP 309
Query: 244 VLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIW 301
L SG+ D++I +W+ G L+ L GH + + S + S + DKT+R+W
Sbjct: 310 FLLSGSRDKTIKMWDVST--GMCLMT--LVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 302 RGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQ 355
+N C+ L H V L D T+ V +GS+D +KVW+
Sbjct: 366 DY--KNKRCMKTLNAHEHFVTSL---------DFHKTAPYVVTGSVDQTVKVWE 408
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 171 (65.3 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 56/219 (25%), Positives = 99/219 (45%)
Query: 155 TLLYSVSWDRTIKIW--RTSDFKCLESITNAHDDAINAVALSDDGDVYTG-SADKKIKVW 211
+++ S S D TIK+W T DF E H D++ ++ G + SAD IK+W
Sbjct: 121 SVMVSASEDATIKVWDYETGDF---ERTLKGHTDSVEDISFDHSGKLLASCSADMTIKLW 177
Query: 212 RRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGA 271
+ + + H+ ++++A+ +G + S + D++I +WE + V
Sbjct: 178 ----DFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTG----YCVKT 229
Query: 272 LRGHTKSILCMAVVSD--LVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAID 329
GH + + + D L+ S S D+T+R+W + C A L H V+C++ A +
Sbjct: 230 FTGHREWVRMVRPNQDGTLIASCSNDQTVRVW--VVATKECKAELREHEHVVECISWAPE 287
Query: 330 ND-----RCDSSDTSY------LVCSGSLDCDIKVWQIS 357
+ S+T + SGS D IK+W +S
Sbjct: 288 SSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 326
Score = 163 (62.4 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 53/196 (27%), Positives = 90/196 (45%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD-V 199
H D+V ++ LL S S D TIK+W F+C+ ++ + HD +++VA+ +GD +
Sbjct: 149 HTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTM-HGHDHNVSSVAIMPNGDHI 207
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVW-- 257
+ S DK IK+W G V H + + + DG+++ S + D+++ VW
Sbjct: 208 VSASRDKTIKMWEVQTGY----CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263
Query: 258 -------EKEEDDGNILVVGALRGHTKSILCMAVVSD---------LVCSGSADKTIRIW 301
E E + + + + S + A S+ + SGS DKTI++W
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Query: 302 RGIDRNYTCLAVLEGH 317
+ CL L GH
Sbjct: 324 -DVSTGM-CLMTLVGH 337
Score = 137 (53.3 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 61/234 (26%), Positives = 104/234 (44%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H VS++A+ + + S S D+TIK+W C+++ T H + + V + DG +
Sbjct: 191 HDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG-HREWVRMVRPNQDGTLI 249
Query: 201 TG-SADKKIKVW----RRSPGN-KKHS-LVDVL----ERHNSGINALALS------CDGS 243
S D+ ++VW + ++H +V+ + E S I+ S G
Sbjct: 250 ASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGP 309
Query: 244 VLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIW 301
L SG+ D++I +W+ G L+ L GH + + S + S + DKT+R+W
Sbjct: 310 FLLSGSRDKTIKMWDVST--GMCLMT--LVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 302 RGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQ 355
+N C+ L H V L D T+ V +GS+D +KVW+
Sbjct: 366 DY--KNKRCMKTLNAHEHFVTSL---------DFHKTAPYVVTGSVDQTVKVWE 408
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 171 (65.3 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 56/219 (25%), Positives = 99/219 (45%)
Query: 155 TLLYSVSWDRTIKIW--RTSDFKCLESITNAHDDAINAVALSDDGDVYTG-SADKKIKVW 211
+++ S S D TIK+W T DF E H D++ ++ G + SAD IK+W
Sbjct: 121 SVMVSASEDATIKVWDYETGDF---ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLW 177
Query: 212 RRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGA 271
+ + + H+ ++++A+ +G + S + D++I +WE + V
Sbjct: 178 ----DFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTG----YCVKT 229
Query: 272 LRGHTKSILCMAVVSD--LVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAID 329
GH + + + D L+ S S D+T+R+W + C A L H V+C++ A +
Sbjct: 230 FTGHREWVRMVRPNQDGTLIASCSNDQTVRVW--VVATKECKAELREHEHVVECISWAPE 287
Query: 330 ND-----RCDSSDTSY------LVCSGSLDCDIKVWQIS 357
+ S+T + SGS D IK+W +S
Sbjct: 288 SSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 326
Score = 163 (62.4 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 53/196 (27%), Positives = 90/196 (45%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD-V 199
H D+V ++ LL S S D TIK+W F+C+ ++ + HD +++VA+ +GD +
Sbjct: 149 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTM-HGHDHNVSSVAIMPNGDHI 207
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVW-- 257
+ S DK IK+W G V H + + + DG+++ S + D+++ VW
Sbjct: 208 VSASRDKTIKMWEVQTGY----CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263
Query: 258 -------EKEEDDGNILVVGALRGHTKSILCMAVVSD---------LVCSGSADKTIRIW 301
E E + + + + S + A S+ + SGS DKTI++W
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Query: 302 RGIDRNYTCLAVLEGH 317
+ CL L GH
Sbjct: 324 -DVSTGM-CLMTLVGH 337
Score = 137 (53.3 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 61/234 (26%), Positives = 104/234 (44%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H VS++A+ + + S S D+TIK+W C+++ T H + + V + DG +
Sbjct: 191 HDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG-HREWVRMVRPNQDGTLI 249
Query: 201 TG-SADKKIKVW----RRSPGN-KKHS-LVDVL----ERHNSGINALALS------CDGS 243
S D+ ++VW + ++H +V+ + E S I+ S G
Sbjct: 250 ASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGP 309
Query: 244 VLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIW 301
L SG+ D++I +W+ G L+ L GH + + S + S + DKT+R+W
Sbjct: 310 FLLSGSRDKTIKMWDVST--GMCLMT--LVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 302 RGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQ 355
+N C+ L H V L D T+ V +GS+D +KVW+
Sbjct: 366 DY--KNKRCMKTLNAHEHFVTSL---------DFHKTAPYVVTGSVDQTVKVWE 408
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 171 (65.3 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 56/219 (25%), Positives = 99/219 (45%)
Query: 155 TLLYSVSWDRTIKIW--RTSDFKCLESITNAHDDAINAVALSDDGDVYTG-SADKKIKVW 211
+++ S S D TIK+W T DF E H D++ ++ G + SAD IK+W
Sbjct: 121 SVMVSASEDATIKVWDYETGDF---ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLW 177
Query: 212 RRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGA 271
+ + + H+ ++++A+ +G + S + D++I +WE + V
Sbjct: 178 ----DFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTG----YCVKT 229
Query: 272 LRGHTKSILCMAVVSD--LVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAID 329
GH + + + D L+ S S D+T+R+W + C A L H V+C++ A +
Sbjct: 230 FTGHREWVRMVRPNQDGTLIASCSNDQTVRVW--VVATKECKAELREHEHVVECISWAPE 287
Query: 330 ND-----RCDSSDTSY------LVCSGSLDCDIKVWQIS 357
+ S+T + SGS D IK+W +S
Sbjct: 288 SSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 326
Score = 163 (62.4 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 53/196 (27%), Positives = 90/196 (45%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD-V 199
H D+V ++ LL S S D TIK+W F+C+ ++ + HD +++VA+ +GD +
Sbjct: 149 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTM-HGHDHNVSSVAIMPNGDHI 207
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVW-- 257
+ S DK IK+W G V H + + + DG+++ S + D+++ VW
Sbjct: 208 VSASRDKTIKMWEVQTGY----CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263
Query: 258 -------EKEEDDGNILVVGALRGHTKSILCMAVVSD---------LVCSGSADKTIRIW 301
E E + + + + S + A S+ + SGS DKTI++W
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Query: 302 RGIDRNYTCLAVLEGH 317
+ CL L GH
Sbjct: 324 -DVSTGM-CLMTLVGH 337
Score = 137 (53.3 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 61/234 (26%), Positives = 104/234 (44%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H VS++A+ + + S S D+TIK+W C+++ T H + + V + DG +
Sbjct: 191 HDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG-HREWVRMVRPNQDGTLI 249
Query: 201 TG-SADKKIKVW----RRSPGN-KKHS-LVDVL----ERHNSGINALALS------CDGS 243
S D+ ++VW + ++H +V+ + E S I+ S G
Sbjct: 250 ASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGP 309
Query: 244 VLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIW 301
L SG+ D++I +W+ G L+ L GH + + S + S + DKT+R+W
Sbjct: 310 FLLSGSRDKTIKMWDVST--GMCLMT--LVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 302 RGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQ 355
+N C+ L H V L D T+ V +GS+D +KVW+
Sbjct: 366 DY--KNKRCMKTLNAHEHFVTSL---------DFHKTAPYVVTGSVDQTVKVWE 408
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 171 (65.3 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 56/219 (25%), Positives = 99/219 (45%)
Query: 155 TLLYSVSWDRTIKIW--RTSDFKCLESITNAHDDAINAVALSDDGDVYTG-SADKKIKVW 211
+++ S S D TIK+W T DF E H D++ ++ G + SAD IK+W
Sbjct: 121 SVMVSASEDATIKVWDYETGDF---ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLW 177
Query: 212 RRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGA 271
+ + + H+ ++++A+ +G + S + D++I +WE + V
Sbjct: 178 ----DFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTG----YCVKT 229
Query: 272 LRGHTKSILCMAVVSD--LVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAID 329
GH + + + D L+ S S D+T+R+W + C A L H V+C++ A +
Sbjct: 230 FTGHREWVRMVRPNQDGTLIASCSNDQTVRVW--VVATKECKAELREHEHVVECISWAPE 287
Query: 330 ND-----RCDSSDTSY------LVCSGSLDCDIKVWQIS 357
+ S+T + SGS D IK+W +S
Sbjct: 288 SSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 326
Score = 163 (62.4 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 53/196 (27%), Positives = 90/196 (45%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD-V 199
H D+V ++ LL S S D TIK+W F+C+ ++ + HD +++VA+ +GD +
Sbjct: 149 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTM-HGHDHNVSSVAIMPNGDHI 207
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVW-- 257
+ S DK IK+W G V H + + + DG+++ S + D+++ VW
Sbjct: 208 VSASRDKTIKMWEVQTGY----CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263
Query: 258 -------EKEEDDGNILVVGALRGHTKSILCMAVVSD---------LVCSGSADKTIRIW 301
E E + + + + S + A S+ + SGS DKTI++W
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Query: 302 RGIDRNYTCLAVLEGH 317
+ CL L GH
Sbjct: 324 -DVSTGM-CLMTLVGH 337
Score = 137 (53.3 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 61/234 (26%), Positives = 104/234 (44%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H VS++A+ + + S S D+TIK+W C+++ T H + + V + DG +
Sbjct: 191 HDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG-HREWVRMVRPNQDGTLI 249
Query: 201 TG-SADKKIKVW----RRSPGN-KKHS-LVDVL----ERHNSGINALALS------CDGS 243
S D+ ++VW + ++H +V+ + E S I+ S G
Sbjct: 250 ASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGP 309
Query: 244 VLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIW 301
L SG+ D++I +W+ G L+ L GH + + S + S + DKT+R+W
Sbjct: 310 FLLSGSRDKTIKMWDVST--GMCLMT--LVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 302 RGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQ 355
+N C+ L H V L D T+ V +GS+D +KVW+
Sbjct: 366 DY--KNKRCMKTLNAHEHFVTSL---------DFHKTAPYVVTGSVDQTVKVWE 408
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 171 (65.3 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 56/219 (25%), Positives = 99/219 (45%)
Query: 155 TLLYSVSWDRTIKIW--RTSDFKCLESITNAHDDAINAVALSDDGDVYTG-SADKKIKVW 211
+++ S S D TIK+W T DF E H D++ ++ G + SAD IK+W
Sbjct: 121 SVMVSASEDATIKVWDYETGDF---ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLW 177
Query: 212 RRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGA 271
+ + + H+ ++++A+ +G + S + D++I +WE + V
Sbjct: 178 ----DFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTG----YCVKT 229
Query: 272 LRGHTKSILCMAVVSD--LVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAID 329
GH + + + D L+ S S D+T+R+W + C A L H V+C++ A +
Sbjct: 230 FTGHREWVRMVRPNQDGTLIASCSNDQTVRVW--VVATKECKAELREHEHVVECISWAPE 287
Query: 330 ND-----RCDSSDTSY------LVCSGSLDCDIKVWQIS 357
+ S+T + SGS D IK+W +S
Sbjct: 288 SSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 326
Score = 163 (62.4 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 53/196 (27%), Positives = 90/196 (45%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD-V 199
H D+V ++ LL S S D TIK+W F+C+ ++ + HD +++VA+ +GD +
Sbjct: 149 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTM-HGHDHNVSSVAIMPNGDHI 207
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVW-- 257
+ S DK IK+W G V H + + + DG+++ S + D+++ VW
Sbjct: 208 VSASRDKTIKMWEVQTGY----CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263
Query: 258 -------EKEEDDGNILVVGALRGHTKSILCMAVVSD---------LVCSGSADKTIRIW 301
E E + + + + S + A S+ + SGS DKTI++W
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Query: 302 RGIDRNYTCLAVLEGH 317
+ CL L GH
Sbjct: 324 -DVSTGM-CLMTLVGH 337
Score = 137 (53.3 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 61/234 (26%), Positives = 104/234 (44%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H VS++A+ + + S S D+TIK+W C+++ T H + + V + DG +
Sbjct: 191 HDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG-HREWVRMVRPNQDGTLI 249
Query: 201 TG-SADKKIKVW----RRSPGN-KKHS-LVDVL----ERHNSGINALALS------CDGS 243
S D+ ++VW + ++H +V+ + E S I+ S G
Sbjct: 250 ASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGP 309
Query: 244 VLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIW 301
L SG+ D++I +W+ G L+ L GH + + S + S + DKT+R+W
Sbjct: 310 FLLSGSRDKTIKMWDVST--GMCLMT--LVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 302 RGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQ 355
+N C+ L H V L D T+ V +GS+D +KVW+
Sbjct: 366 DY--KNKRCMKTLNAHEHFVTSL---------DFHKTAPYVVTGSVDQTVKVWE 408
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 171 (65.3 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 56/219 (25%), Positives = 99/219 (45%)
Query: 155 TLLYSVSWDRTIKIW--RTSDFKCLESITNAHDDAINAVALSDDGDVYTG-SADKKIKVW 211
+++ S S D TIK+W T DF E H D++ ++ G + SAD IK+W
Sbjct: 121 SVMVSASEDATIKVWDYETGDF---ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLW 177
Query: 212 RRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGA 271
+ + + H+ ++++A+ +G + S + D++I +WE + V
Sbjct: 178 ----DFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTG----YCVKT 229
Query: 272 LRGHTKSILCMAVVSD--LVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAID 329
GH + + + D L+ S S D+T+R+W + C A L H V+C++ A +
Sbjct: 230 FTGHREWVRMVRPNQDGTLIASCSNDQTVRVW--VVATKECKAELREHEHVVECISWAPE 287
Query: 330 ND-----RCDSSDTSY------LVCSGSLDCDIKVWQIS 357
+ S+T + SGS D IK+W +S
Sbjct: 288 SSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 326
Score = 163 (62.4 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 53/196 (27%), Positives = 90/196 (45%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD-V 199
H D+V ++ LL S S D TIK+W F+C+ ++ + HD +++VA+ +GD +
Sbjct: 149 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTM-HGHDHNVSSVAIMPNGDHI 207
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVW-- 257
+ S DK IK+W G V H + + + DG+++ S + D+++ VW
Sbjct: 208 VSASRDKTIKMWEVQTGY----CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263
Query: 258 -------EKEEDDGNILVVGALRGHTKSILCMAVVSD---------LVCSGSADKTIRIW 301
E E + + + + S + A S+ + SGS DKTI++W
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Query: 302 RGIDRNYTCLAVLEGH 317
+ CL L GH
Sbjct: 324 -DVSTGM-CLMTLVGH 337
Score = 137 (53.3 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 61/234 (26%), Positives = 104/234 (44%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H VS++A+ + + S S D+TIK+W C+++ T H + + V + DG +
Sbjct: 191 HDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG-HREWVRMVRPNQDGTLI 249
Query: 201 TG-SADKKIKVW----RRSPGN-KKHS-LVDVL----ERHNSGINALALS------CDGS 243
S D+ ++VW + ++H +V+ + E S I+ S G
Sbjct: 250 ASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGP 309
Query: 244 VLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIW 301
L SG+ D++I +W+ G L+ L GH + + S + S + DKT+R+W
Sbjct: 310 FLLSGSRDKTIKMWDVST--GMCLMT--LVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 302 RGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQ 355
+N C+ L H V L D T+ V +GS+D +KVW+
Sbjct: 366 DY--KNKRCMKTLNAHEHFVTSL---------DFHKTAPYVVTGSVDQTVKVWE 408
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 171 (65.3 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 56/219 (25%), Positives = 99/219 (45%)
Query: 155 TLLYSVSWDRTIKIW--RTSDFKCLESITNAHDDAINAVALSDDGDVYTG-SADKKIKVW 211
+++ S S D TIK+W T DF E H D++ ++ G + SAD IK+W
Sbjct: 121 SVMVSASEDATIKVWDYETGDF---ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLW 177
Query: 212 RRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGA 271
+ + + H+ ++++A+ +G + S + D++I +WE + V
Sbjct: 178 ----DFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTG----YCVKT 229
Query: 272 LRGHTKSILCMAVVSD--LVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAID 329
GH + + + D L+ S S D+T+R+W + C A L H V+C++ A +
Sbjct: 230 FTGHREWVRMVRPNQDGTLIASCSNDQTVRVW--VVATKECKAELREHEHVVECISWAPE 287
Query: 330 ND-----RCDSSDTSY------LVCSGSLDCDIKVWQIS 357
+ S+T + SGS D IK+W +S
Sbjct: 288 SSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 326
Score = 163 (62.4 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 53/196 (27%), Positives = 90/196 (45%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD-V 199
H D+V ++ LL S S D TIK+W F+C+ ++ + HD +++VA+ +GD +
Sbjct: 149 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTM-HGHDHNVSSVAIMPNGDHI 207
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVW-- 257
+ S DK IK+W G V H + + + DG+++ S + D+++ VW
Sbjct: 208 VSASRDKTIKMWEVQTGY----CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263
Query: 258 -------EKEEDDGNILVVGALRGHTKSILCMAVVSD---------LVCSGSADKTIRIW 301
E E + + + + S + A S+ + SGS DKTI++W
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Query: 302 RGIDRNYTCLAVLEGH 317
+ CL L GH
Sbjct: 324 -DVSTGM-CLMTLVGH 337
Score = 137 (53.3 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 61/234 (26%), Positives = 104/234 (44%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H VS++A+ + + S S D+TIK+W C+++ T H + + V + DG +
Sbjct: 191 HDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG-HREWVRMVRPNQDGTLI 249
Query: 201 TG-SADKKIKVW----RRSPGN-KKHS-LVDVL----ERHNSGINALALS------CDGS 243
S D+ ++VW + ++H +V+ + E S I+ S G
Sbjct: 250 ASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGP 309
Query: 244 VLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIW 301
L SG+ D++I +W+ G L+ L GH + + S + S + DKT+R+W
Sbjct: 310 FLLSGSRDKTIKMWDVST--GMCLMT--LVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 302 RGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQ 355
+N C+ L H V L D T+ V +GS+D +KVW+
Sbjct: 366 DY--KNKRCMKTLNAHEHFVTSL---------DFHKTAPYVVTGSVDQTVKVWE 408
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 171 (65.3 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 56/219 (25%), Positives = 99/219 (45%)
Query: 155 TLLYSVSWDRTIKIW--RTSDFKCLESITNAHDDAINAVALSDDGDVYTG-SADKKIKVW 211
+++ S S D TIK+W T DF E H D++ ++ G + SAD IK+W
Sbjct: 121 SVMVSASEDATIKVWDYETGDF---ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLW 177
Query: 212 RRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGA 271
+ + + H+ ++++A+ +G + S + D++I +WE + V
Sbjct: 178 ----DFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTG----YCVKT 229
Query: 272 LRGHTKSILCMAVVSD--LVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAID 329
GH + + + D L+ S S D+T+R+W + C A L H V+C++ A +
Sbjct: 230 FTGHREWVRMVRPNQDGTLIASCSNDQTVRVW--VVATKECKAELREHEHVVECISWAPE 287
Query: 330 ND-----RCDSSDTSY------LVCSGSLDCDIKVWQIS 357
+ S+T + SGS D IK+W +S
Sbjct: 288 SSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 326
Score = 163 (62.4 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 53/196 (27%), Positives = 90/196 (45%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD-V 199
H D+V ++ LL S S D TIK+W F+C+ ++ + HD +++VA+ +GD +
Sbjct: 149 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTM-HGHDHNVSSVAIMPNGDHI 207
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVW-- 257
+ S DK IK+W G V H + + + DG+++ S + D+++ VW
Sbjct: 208 VSASRDKTIKMWEVQTGY----CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263
Query: 258 -------EKEEDDGNILVVGALRGHTKSILCMAVVSD---------LVCSGSADKTIRIW 301
E E + + + + S + A S+ + SGS DKTI++W
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Query: 302 RGIDRNYTCLAVLEGH 317
+ CL L GH
Sbjct: 324 -DVSTGM-CLMTLVGH 337
Score = 137 (53.3 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 61/234 (26%), Positives = 104/234 (44%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H VS++A+ + + S S D+TIK+W C+++ T H + + V + DG +
Sbjct: 191 HDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG-HREWVRMVRPNQDGTLI 249
Query: 201 TG-SADKKIKVW----RRSPGN-KKHS-LVDVL----ERHNSGINALALS------CDGS 243
S D+ ++VW + ++H +V+ + E S I+ S G
Sbjct: 250 ASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGP 309
Query: 244 VLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIW 301
L SG+ D++I +W+ G L+ L GH + + S + S + DKT+R+W
Sbjct: 310 FLLSGSRDKTIKMWDVST--GMCLMT--LVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 302 RGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQ 355
+N C+ L H V L D T+ V +GS+D +KVW+
Sbjct: 366 DY--KNKRCMKTLNAHEHFVTSL---------DFHKTAPYVVTGSVDQTVKVWE 408
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 171 (65.3 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 57/219 (26%), Positives = 99/219 (45%)
Query: 155 TLLYSVSWDRTIKIW--RTSDFKCLESITNAHDDAINAVALSDDGDVYTG-SADKKIKVW 211
+++ S S D TIK+W T DF E H D++ ++ G + SAD IK+W
Sbjct: 121 SVMVSASEDATIKVWDYETGDF---ERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLW 177
Query: 212 RRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGA 271
+ + + H+ ++++A+ +G + S + D++I +WE + V
Sbjct: 178 ----DFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTG----YCVKT 229
Query: 272 LRGHTKSILCMAVVSD--LVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAID 329
GH + + + D L+ S S D+T+R+W + C A L H V+C++ A +
Sbjct: 230 FTGHREWVRMVRPNQDGTLIASCSNDQTVRVW--VVATKECKAELREHEHVVECISWAPE 287
Query: 330 ND-----RCDSSDTSY------LVCSGSLDCDIKVWQIS 357
+ S+T + SGS D IK+W IS
Sbjct: 288 SSYSTISEATGSETKKSGKPGPFLLSGSRDKTIKMWDIS 326
Score = 164 (62.8 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 54/196 (27%), Positives = 90/196 (45%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD-V 199
H D+V ++ LL S S D TIK+W F+C+ ++ + HD +++VA+ +GD +
Sbjct: 149 HTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTM-HGHDHNVSSVAIMPNGDHI 207
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVW-- 257
+ S DK IK+W G V H + + + DG+++ S + D+++ VW
Sbjct: 208 VSASRDKTIKMWEVQTGY----CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263
Query: 258 -------EKEEDDGNILVVGALRGHTKSILCMAVVSD---------LVCSGSADKTIRIW 301
E E + + + + S + A S+ + SGS DKTI++W
Sbjct: 264 ATKECKAELREHEHVVECISWAPESSYSTISEATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Query: 302 RGIDRNYTCLAVLEGH 317
I CL L GH
Sbjct: 324 -DISTGM-CLMTLVGH 337
Score = 134 (52.2 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 61/234 (26%), Positives = 104/234 (44%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H VS++A+ + + S S D+TIK+W C+++ T H + + V + DG +
Sbjct: 191 HDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG-HREWVRMVRPNQDGTLI 249
Query: 201 TG-SADKKIKVW----RRSPGN-KKHS-LVDVL----ERHNSGINALALS------CDGS 243
S D+ ++VW + ++H +V+ + E S I+ S G
Sbjct: 250 ASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISEATGSETKKSGKPGP 309
Query: 244 VLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIW 301
L SG+ D++I +W+ G L+ L GH + + S + S + DKT+R+W
Sbjct: 310 FLLSGSRDKTIKMWDIST--GMCLMT--LVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 302 RGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQ 355
+N C+ L H V L D T+ V +GS+D +KVW+
Sbjct: 366 DF--KNKRCMKTLNAHEHFVTSL---------DFHKTAPYVVTGSVDQTVKVWE 408
>ZFIN|ZDB-GENE-040426-2855 [details] [associations]
symbol:gnb1b "guanine nucleotide binding protein
(G protein), beta polypeptide 1b" species:7955 "Danio rerio"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-040426-2855 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 HSSP:P16649 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:CU207276 EMBL:CR854824 EMBL:BC044482
EMBL:BC152684 IPI:IPI00483806 RefSeq:NP_998646.1
RefSeq:XP_003198887.1 UniGene:Dr.26330 SMR:Q803H5 STRING:Q803H5
Ensembl:ENSDART00000015309 Ensembl:ENSDART00000084989
Ensembl:ENSDART00000136035 GeneID:100537780 GeneID:406796
KEGG:dre:100537780 KEGG:dre:406796 CTD:406796 InParanoid:Q803H5
NextBio:20818306 Uniprot:Q803H5
Length = 340
Score = 169 (64.5 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 48/171 (28%), Positives = 81/171 (47%)
Query: 134 KTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVAL 193
+T T+ H V +L+L D L S + D + K+W + C ++ T H+ INA+
Sbjct: 176 QTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDIREGMCRQTFTG-HESDINAICF 234
Query: 194 SDDGDVY-TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDR 252
+G+ + TGS D +++ + +V + GI ++A S G +L +G D
Sbjct: 235 FPNGNAFATGSDDATCRLFDLRADQEL--MVYSHDNIICGITSVAFSKSGRLLLAGYDDF 292
Query: 253 SIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIW 301
+ VW+ + D G L GH + C+ V D V +GS D ++IW
Sbjct: 293 NCNVWDTLKADR----AGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 124 (48.7 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 42/164 (25%), Positives = 68/164 (41%)
Query: 194 SDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRS 253
+D + + S D K+ +W NK H++ +S + A + G+ + G D
Sbjct: 65 TDSRLLVSASQDGKLIIWDSYTTNKVHAI----PLRSSWVMTCAYAPSGNYVACGGLDNI 120
Query: 254 IIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD-LVCSGSADKTIRIWRGIDRNYTCLA 312
++ + +GN+ V L GHT + C + D + + S D T +W I+
Sbjct: 121 CSIYSLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALW-DIETGQQT-T 178
Query: 313 VLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
GH G V L+ A DT V SG+ D K+W I
Sbjct: 179 TFAGHTGDVMSLSLA--------PDTRLFV-SGACDASAKLWDI 213
>UNIPROTKB|I3LQS7 [details] [associations]
symbol:RRP9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00550000075093
OMA:AAKDCTI EMBL:FP102591 Ensembl:ENSSSCT00000032341 Uniprot:I3LQS7
Length = 478
Score = 172 (65.6 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 71/251 (28%), Positives = 118/251 (47%)
Query: 70 AVKSLVVLADKLFSAHQDHKI-RVWK-INNQEPDHQKYTRLATLPT------LGDRAIKL 121
A K ++ + S + H I R K Q P H + + + GDR+ KL
Sbjct: 167 AAKDCTIIKWSVESGRKLHVIPRAKKGAEGQPPGHSSHILCMAISSDGKYLASGDRS-KL 225
Query: 122 LMPKNHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESIT 181
++ Q RH T+ H DAVS LA + LYS S DR++K+W ++ +E++
Sbjct: 226 ILIWE-AQSCRH-LYTFTGHRDAVSGLAFRRGTHQLYSTSHDRSVKVWNVAENSYVETLF 283
Query: 182 NAHDDAINAV-ALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSC 240
H DA+ A+ ALS + V G D ++VW+ P ++ LV H I+++ L
Sbjct: 284 G-HQDAVAALDALSRECCVTAGGRDGTVRVWK-IP--EESQLV--FYGHQGSIDSIQLIN 337
Query: 241 DGSVLYSGACDRSIIVWEKEEDDGNILVVGA--LRGHTK-------SILCMAVVSDLVCS 291
+ ++ SGA D S+ +W + L A LRG S + + +DL+ +
Sbjct: 338 EEHMV-SGADDGSVALWGLSKKRPLALQREAHGLRGEQGLEQPFWVSSVAALLNTDLIAT 396
Query: 292 GSADKTIRIWR 302
GS + ++R+W+
Sbjct: 397 GSHNNSVRLWQ 407
Score = 140 (54.3 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 58/228 (25%), Positives = 105/228 (46%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALS-DDGDV 199
H + +A++ D L S + I IW + L + T H DA++ +A +
Sbjct: 201 HSSHILCMAISSDGKYLASGDRSKLILIWEAQSCRHLYTFTG-HRDAVSGLAFRRGTHQL 259
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINAL-ALSCDGSVLYSGACDRSIIVWE 258
Y+ S D+ +KVW + ++S V+ L H + AL ALS + V +G D ++ VW+
Sbjct: 260 YSTSHDRSVKVWNVA----ENSYVETLFGHQDAVAALDALSRECCVT-AGGRDGTVRVWK 314
Query: 259 KEEDDGNILVVGALRGHTKSILCMAVVSDL-VCSGSADKTIRIWRGIDRNYTCLAVLEGH 317
E+ + GH SI + ++++ + SG+ D ++ +W G+ + E H
Sbjct: 315 IPEESQLVFY-----GHQGSIDSIQLINEEHMVSGADDGSVALW-GLSKKRPLALQREAH 368
Query: 318 --RG------P--VKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQ 355
RG P V +AA ++ D L+ +GS + +++WQ
Sbjct: 369 GLRGEQGLEQPFWVSSVAALLNTD---------LIATGSHNNSVRLWQ 407
Score = 122 (48.0 bits), Expect = 0.00016, P = 0.00016
Identities = 45/187 (24%), Positives = 84/187 (44%)
Query: 180 ITNAHDDAINAVALS-DDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLER-------HNS 231
I H +I + ++ DD +++ + D I W G K H + + H+S
Sbjct: 144 ILRGHQLSITCLVITPDDLAIFSAAKDCTIIKWSVESGRKLHVIPRAKKGAEGQPPGHSS 203
Query: 232 GINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVV--SDLV 289
I +A+S DG L SG + I++WE + + + GH ++ +A + +
Sbjct: 204 HILCMAISSDGKYLASGDRSKLILIWEAQ----SCRHLYTFTGHRDAVSGLAFRRGTHQL 259
Query: 290 CSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDC 349
S S D+++++W + +Y + L GH+ V L A + + C V +G D
Sbjct: 260 YSTSHDRSVKVWNVAENSY--VETLFGHQDAVAALDA-LSRECC--------VTAGGRDG 308
Query: 350 DIKVWQI 356
++VW+I
Sbjct: 309 TVRVWKI 315
>UNIPROTKB|E7EP32 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246
PRINTS:PR00319 EMBL:AC009488 InterPro:IPR016346 PIRSF:PIRSF002394
HGNC:HGNC:4398 IPI:IPI00925530 SMR:E7EP32 Ensembl:ENST00000424361
Ensembl:ENST00000436220 Uniprot:E7EP32
Length = 296
Score = 167 (63.8 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 73/303 (24%), Positives = 128/303 (42%)
Query: 14 TLKGHNS--YVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAV 71
TL+GH + Y + L + S D ++ WD T ++++ L ++ ++
Sbjct: 6 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYT-TNKVHAIPLRSSWVMTCAYAPS 64
Query: 72 KSLVVLA--DKLFSAHQDHKIRVW--KINNQEPDHQKYTRLATLPTLGDRAIKLLMPKNH 127
+ V D + S + K R +++ + P H Y L+ L D I
Sbjct: 65 GNFVACGGLDNICSIYS-LKTREGNVRVSRELPGHTGY--LSCCRFLDDNQIITSSGDTT 121
Query: 128 VQI----RRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA 183
+ +T + H V +L+L D S + D +IK+W D C ++
Sbjct: 122 CALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIG- 180
Query: 184 HDDAINAVALSDDGDVYT-GSADKKIKVW--RRSPGNKKHSLVDVLERHNSGINALALSC 240
H+ INAVA +G +T GS D +++ R +S +++ GI ++A S
Sbjct: 181 HESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNII----CGITSVAFSR 236
Query: 241 DGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTI 298
G +L +G D + +W+ + D G L GH + C+ V D V +GS D +
Sbjct: 237 SGRLLLAGYDDFNCNIWDAMKGDR----AGVLAGHDNRVSCLGVTDDGMAVATGSWDSFL 292
Query: 299 RIW 301
+IW
Sbjct: 293 KIW 295
Score = 124 (48.7 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 41/170 (24%), Positives = 73/170 (42%)
Query: 194 SDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRS 253
+D + + S D K+ +W NK H++ +S + A + G+ + G D
Sbjct: 21 TDSRLLVSASQDGKLIIWDSYTTNKVHAI----PLRSSWVMTCAYAPSGNFVACGGLDNI 76
Query: 254 IIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD-LVCSGSADKTIRIWRGIDRNYTCLA 312
++ + +GN+ V L GHT + C + D + + S D T +W I+ +
Sbjct: 77 CSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDTTCALW-DIETGQQTVG 135
Query: 313 VLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQISFPLVR 362
GH G V L+ A D +++ SG+ D IK+W + + R
Sbjct: 136 -FAGHSGDVMSLSLAPDG-------RTFV--SGACDASIKLWDVRDSMCR 175
Score = 113 (44.8 bits), Expect = 0.00069, P = 0.00069
Identities = 48/217 (22%), Positives = 86/217 (39%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H +S D ++ S S D T +W + H + +++L+ DG +
Sbjct: 98 HTGYLSCCRFLDDNQIITS-SGDTTCALWDIETGQQTVGFAG-HSGDVMSLSLAPDGRTF 155
Query: 201 -TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEK 259
+G+ D IK+W + + + H S INA+A +G +G+ D + +++
Sbjct: 156 VSGACDASIKLWDVRDSMCRQTFIG----HESDINAVAFFPNGYAFTTGSDDATCRLFDL 211
Query: 260 EEDDGNILVV--GALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGH 317
D ++ + G T + + L+ +G D IW + + VL GH
Sbjct: 212 RADQELLMYSHDNIICGITS--VAFSRSGRLLLAGYDDFNCNIWDAMKGDRA--GVLAGH 267
Query: 318 RGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVW 354
V CL +D V +GS D +K+W
Sbjct: 268 DNRVSCLGV---------TDDGMAVATGSWDSFLKIW 295
>POMBASE|SPAC4D7.03 [details] [associations]
symbol:pop2 "F-box/WD repeat protein Pop2" species:4896
"Schizosaccharomyces pombe" [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IC]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=IPI] [GO:0032876
"negative regulation of DNA endoreduplication" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPAC4D7.03 GO:GO:0007346 GO:GO:0005737 GO:GO:0005635
EMBL:CU329670 GenomeReviews:CU329670_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0006511
GO:GO:0019005 GO:GO:0032876 KO:K03361 OrthoDB:EOG4B2X5M
EMBL:AF038867 EMBL:AF064515 PIR:T43557 RefSeq:NP_594956.1
ProteinModelPortal:O14170 IntAct:O14170 STRING:O14170
EnsemblFungi:SPAC4D7.03.1 GeneID:2543514 KEGG:spo:SPAC4D7.03
OMA:RIANMEC NextBio:20804524 Uniprot:O14170
Length = 703
Score = 174 (66.3 bits), Expect = 4.7e-10, P = 4.7e-10
Identities = 73/256 (28%), Positives = 119/256 (46%)
Query: 15 LKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAVKSL 74
L+GH V ++ + L +GS D VR W N ++ F + +I+ + V S
Sbjct: 387 LEGHKEGVWAVKIHENTLVSGSIDKTVRVW--NIEKAKCTHIFRGHISIIRCLEILVPSR 444
Query: 75 -------VVLADK--LFSAHQDHKIRVWKI-NNQEPDHQKYTRLATLPTLGDRAIKL-LM 123
+V D+ + S +DH +RVWK+ N +P P L D +
Sbjct: 445 LIRHGVEIVEPDQPYIVSGSRDHTLRVWKLPKNTDP-----------PYLPDNTNSIDRW 493
Query: 124 PKNHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA 183
KN + H T + H D+V ++ D +L S S+D +I+IWR S +CL +
Sbjct: 494 EKNPYFV--H---TLIGHTDSVRTISGYGD--ILVSGSYDSSIRIWRVSTGECLYHL-RG 545
Query: 184 HDDAINAVALSDDGDV-YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDG 242
H I +V + ++ +GS DK I+VW S G K+ VLE H++ + L + +
Sbjct: 546 HSLRIYSVLYEPERNICISGSMDKSIRVWDLSTGTCKY----VLEGHDAFVTLLNVFQNR 601
Query: 243 SVLYSGACDRSIIVWE 258
L SG+ D +I +W+
Sbjct: 602 --LISGSADSTIRIWD 615
Score = 154 (59.3 bits), Expect = 8.0e-08, P = 8.0e-08
Identities = 82/325 (25%), Positives = 137/325 (42%)
Query: 68 KGAVKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLGDRAIKLLMPKNH 127
K V ++ + + L S D +RVW I + H ++ + R +++L+P
Sbjct: 391 KEGVWAVKIHENTLVSGSIDKTVRVWNIEKAKCTHIFRGHISII-----RCLEILVPSRL 445
Query: 128 VQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWR---TSDFKCLESITNA- 183
++ H V+ V D+ + S S D T+++W+ +D L TN+
Sbjct: 446 IR----------HGVEIVEP-----DQPYIVSGSRDHTLRVWKLPKNTDPPYLPDNTNSI 490
Query: 184 ---------------HDDAINAVALSDDGDVY-TGSADKKIKVWRRSPGNKKHSLVDVLE 227
H D++ + S GD+ +GS D I++WR S G + L
Sbjct: 491 DRWEKNPYFVHTLIGHTDSVRTI--SGYGDILVSGSYDSSIRIWRVSTGECLYHL----R 544
Query: 228 RHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD 287
H+ I ++ + ++ SG+ D+SI VW+ G V L GH + + V +
Sbjct: 545 GHSLRIYSVLYEPERNICISGSMDKSIRVWDLST--GTCKYV--LEGHDAFVTLLNVFQN 600
Query: 288 LVCSGSADKTIRIWRGIDRNY-TCLAVLEGHRGPVKCLAAAIDNDRC----DSSDTSYLV 342
+ SGSAD TIRIW D N L VL + G + + D + D S + V
Sbjct: 601 RLISGSADSTIRIW---DLNTGKPLMVLPSNSGYISSFVS--DEHKIISGNDGSVKLWDV 655
Query: 343 CSGSLD----CDI-KVWQISFPLVR 362
+G L D+ K+W + F +R
Sbjct: 656 RTGKLLRFLLTDLTKIWHVDFDAMR 680
>CGD|CAL0004039 [details] [associations]
symbol:orf19.3301 species:5476 "Candida albicans" [GO:0043224
"nuclear SCF ubiquitin ligase complex" evidence=IEA] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IEA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IEA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0000114 "regulation of
transcription involved in G1 phase of mitotic cell cycle"
evidence=IEA] [GO:0046686 "response to cadmium ion" evidence=IEA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IEA]
[GO:0046685 "response to arsenic-containing substance"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA]
[GO:0030674 "protein binding, bridging" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 CGD:CAL0004039
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AACQ01000045 EMBL:AACQ01000042 KO:K10259
RefSeq:XP_718124.1 RefSeq:XP_718393.1 ProteinModelPortal:Q5A933
STRING:Q5A933 GeneID:3639919 GeneID:3640178 KEGG:cal:CaO19.10811
KEGG:cal:CaO19.3301 Uniprot:Q5A933
Length = 735
Score = 174 (66.3 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 54/200 (27%), Positives = 89/200 (44%)
Query: 133 HKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVA 192
H T+ H D V+ L + L + S+D TIKIW+ +C++++T H + A+
Sbjct: 374 HTIKTFTGHSDGVTCLQFNRK--YLMTGSYDTTIKIWKIDSGECVKTLTG-HTKGVRALV 430
Query: 193 LSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDR 252
D+ + +G D IKVW G + H + +++ + SG+ D
Sbjct: 431 F-DNQKLISGGLDSTIKVWNYHTGQ----CIATYRGHEDAV--VSVDFTNKSIVSGSADH 483
Query: 253 SIIVWEKEEDDGNILVVGALRGHTKSILCMAV--VSDLVCSGSADKTIRIWRGIDRNYT- 309
++ VW + LRGHT + + + S+ + S S D TIR+W D N
Sbjct: 484 TVRVWHVDSR-----TCYTLRGHTDWVNHVKIHSASNTIFSASDDTTIRMW---DMNSNE 535
Query: 310 CLAVL-----EGHRGPVKCL 324
C+ V GH G V+C+
Sbjct: 536 CIKVFGGMENNGHIGQVQCI 555
Score = 155 (59.6 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 45/151 (29%), Positives = 66/151 (43%)
Query: 167 KIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVL 226
K WR +++ T H D + + + + TGS D IK+W+ G V L
Sbjct: 367 KNWRKGTHT-IKTFTG-HSDGVTCLQFNRKY-LMTGSYDTTIKIWKIDSGE----CVKTL 419
Query: 227 ERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVS 286
H G+ AL D L SG D +I VW + RGH +++ + +
Sbjct: 420 TGHTKGVRALVF--DNQKLISGGLDSTIKVWNYHTGQ----CIATYRGHEDAVVSVDFTN 473
Query: 287 DLVCSGSADKTIRIWRGIDRNYTCLAVLEGH 317
+ SGSAD T+R+W +D TC L GH
Sbjct: 474 KSIVSGSADHTVRVWH-VDSR-TCYT-LRGH 501
Score = 146 (56.5 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 63/250 (25%), Positives = 108/250 (43%)
Query: 2 HNLSV--VDHHCLTTLKGHNSYVSSLAL--AGKFLYTGSSDNEVRSWDCNTFSSELDQEF 57
H + V VD TL+GH +V+ + + A +++ S D +R WD N S+E + F
Sbjct: 483 HTVRVWHVDSRTCYTLRGHTDWVNHVKIHSASNTIFSASDDTTIRMWDMN--SNECIKVF 540
Query: 58 --LSNNNIVAVGKGAVKSLVVLA--DKLFS--AHQDHKIRVWKINNQEPDHQKYTRLATL 111
+ NN + G V+ ++ ++L + D + T AT
Sbjct: 541 GGMENNGHI----GQVQCIIPFTYKEELIEDESESDSENNQNSTTTTTTTSAAATATATA 596
Query: 112 --PTLGDRAIKLLMPKNHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIW 169
TLG I L P + I R T T ++ A +A T + + D TIK+W
Sbjct: 597 MGATLGTNNISL--PNDTATINR-STFTPSNNNTATTATTPNSYPTHFLTSALDNTIKLW 653
Query: 170 RTSDFKCLESITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERH 229
+ KC+ + H + + ++A +D + +G+ D+ IKVW G H+ +
Sbjct: 654 DVATGKCIRT-QFGHIEGVWSIA-ADTFRIISGAHDRLIKVWDLQNGKCLHTF-----SN 706
Query: 230 NSGINALALS 239
NS ++ + LS
Sbjct: 707 NSSVSCVGLS 716
Score = 117 (46.2 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 42/174 (24%), Positives = 77/174 (44%)
Query: 10 HCLTTLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKG 69
H + T GH+ V+ L K+L TGS D ++ W + S E + + KG
Sbjct: 374 HTIKTFTGHSDGVTCLQFNRKYLMTGSYDTTIKIWKID--SGECVKTLTGHT------KG 425
Query: 70 AVKSLVVLADKLFSAHQDHKIRVWKINNQE--PDHQKYTRLATLPTLGDRAIKLLMPKNH 127
V++LV KL S D I+VW + + ++ + +++I +
Sbjct: 426 -VRALVFDNQKLISGGLDSTIKVWNYHTGQCIATYRGHEDAVVSVDFTNKSIVSGSADHT 484
Query: 128 VQIRR--HKTC-TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLE 178
V++ +TC T H D V+ + + ++S S D TI++W + +C++
Sbjct: 485 VRVWHVDSRTCYTLRGHTDWVNHVKIHSASNTIFSASDDTTIRMWDMNSNECIK 538
Score = 92 (37.4 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 26/99 (26%), Positives = 48/99 (48%)
Query: 4 LSVVDHH---CLTTLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSN 60
+ V ++H C+ T +GH V S+ K + +GS+D+ VR W ++ + +
Sbjct: 445 IKVWNYHTGQCIATYRGHEDAVVSVDFTNKSIVSGSADHTVRVWHVDSRTC-----YTLR 499
Query: 61 NNIVAVGKGAVKSLVVLADKLFSAHQDHKIRVWKINNQE 99
+ V + S ++ +FSA D IR+W +N+ E
Sbjct: 500 GHTDWVNHVKIHSA---SNTIFSASDDTTIRMWDMNSNE 535
Score = 82 (33.9 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 21/71 (29%), Positives = 40/71 (56%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H++ V ++A D + S + DR IK+W + KCL + +N + +++ V LSD V
Sbjct: 667 HIEGVWSIAA--DTFRIISGAHDRLIKVWDLQNGKCLHTFSN--NSSVSCVGLSDSRFV- 721
Query: 201 TGSADKKIKVW 211
G + ++K++
Sbjct: 722 AGLENGEVKMY 732
Score = 56 (24.8 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 23/101 (22%), Positives = 45/101 (44%)
Query: 201 TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKE 260
T + D IK+W + G + H G+ ++A D + SGA DR I VW+ +
Sbjct: 643 TSALDNTIKLWDVATGK----CIRTQFGHIEGVWSIA--ADTFRIISGAHDRLIKVWDLQ 696
Query: 261 EDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIW 301
+G L + + S+ C+ + +G + ++++
Sbjct: 697 --NGKCLHTFS---NNSSVSCVGLSDSRFVAGLENGEVKMY 732
Score = 54 (24.1 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 19/79 (24%), Positives = 36/79 (45%)
Query: 247 SGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGID- 305
+ A D +I +W+ G + GH + + +A + + SG+ D+ I++W D
Sbjct: 643 TSALDNTIKLWDVAT--GKC--IRTQFGHIEGVWSIAADTFRIISGAHDRLIKVW---DL 695
Query: 306 RNYTCLAVLEGHRGPVKCL 324
+N CL + V C+
Sbjct: 696 QNGKCLHTFSNNSS-VSCV 713
Score = 44 (20.5 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 19/66 (28%), Positives = 29/66 (43%)
Query: 291 SGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCD 350
+ + D TI++W C+ GH V +AA DT + + SG+ D
Sbjct: 643 TSALDNTIKLWDVATGK--CIRTQFGHIEGVWSIAA----------DT-FRIISGAHDRL 689
Query: 351 IKVWQI 356
IKVW +
Sbjct: 690 IKVWDL 695
>UNIPROTKB|P62871 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9913 "Bos taurus"
[GO:0071380 "cellular response to prostaglandin E stimulus"
evidence=IDA] [GO:0071870 "cellular response to catecholamine
stimulus" evidence=IDA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=IDA] [GO:0005622 "intracellular" evidence=IDA]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 EMBL:X03073
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 GO:GO:0060041
GO:GO:0007200 GO:GO:0007191 GO:GO:0071870 GO:GO:0071380 PDB:1OMW
PDB:2BCJ PDB:3PSC PDB:3PVU PDB:3PVW PDB:3UZS PDBsum:1OMW
PDBsum:2BCJ PDBsum:3PSC PDBsum:3PVU PDBsum:3PVW PDBsum:3UZS
PDB:3CIK PDB:3KRW PDB:3KRX PDB:3V5W PDBsum:3CIK PDBsum:3KRW
PDBsum:3KRX PDBsum:3V5W GO:GO:0001750 PRINTS:PR00319 GO:GO:0050909
GO:GO:0005834 EMBL:M13236 EMBL:BC105260 IPI:IPI00703160 PIR:A24225
RefSeq:NP_786971.2 UniGene:Bt.57702 PDB:1A0R PDB:1B9X PDB:1B9Y
PDB:1GG2 PDB:1GOT PDB:1GP2 PDB:1TBG PDB:1XHM PDB:2TRC PDB:3AH8
PDBsum:1A0R PDBsum:1B9X PDBsum:1B9Y PDBsum:1GG2 PDBsum:1GOT
PDBsum:1GP2 PDBsum:1TBG PDBsum:1XHM PDBsum:2TRC PDBsum:3AH8
ProteinModelPortal:P62871 SMR:P62871 DIP:DIP-29227N IntAct:P62871
MINT:MINT-1864875 STRING:P62871 PRIDE:P62871
Ensembl:ENSBTAT00000000259 Ensembl:ENSBTAT00000045065 GeneID:281201
KEGG:bta:281201 CTD:2782 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InParanoid:P62871 KO:K04536
OMA:CMLWDIE OrthoDB:EOG4HX51D EvolutionaryTrace:P62871
NextBio:20805257 ArrayExpress:P62871 InterPro:IPR016346
PIRSF:PIRSF002394 Uniprot:P62871
Length = 340
Score = 168 (64.2 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 48/173 (27%), Positives = 83/173 (47%)
Query: 134 KTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVAL 193
+T T+ H V +L+L D L S + D + K+W + C ++ T H+ INA+
Sbjct: 176 QTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTG-HESDINAICF 234
Query: 194 SDDGDVY-TGSADKKIKVW--RRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGAC 250
+G+ + TGS D +++ R +S +++ GI +++ S G +L +G
Sbjct: 235 FPNGNAFATGSDDATCRLFDLRADQELMTYSHDNII----CGITSVSFSKSGRLLLAGYD 290
Query: 251 DRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIW 301
D + VW+ + D G L GH + C+ V D V +GS D ++IW
Sbjct: 291 DFNCNVWDALKADR----AGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 123 (48.4 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 41/164 (25%), Positives = 68/164 (41%)
Query: 194 SDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRS 253
+D + + S D K+ +W NK H++ +S + A + G+ + G D
Sbjct: 65 TDSRLLVSASQDGKLIIWDSYTTNKVHAI----PLRSSWVMTCAYAPSGNYVACGGLDNI 120
Query: 254 IIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD-LVCSGSADKTIRIWRGIDRNYTCLA 312
++ + +GN+ V L GHT + C + D + + S D T +W I+
Sbjct: 121 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALW-DIETGQQT-T 178
Query: 313 VLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
GH G V L+ A DT V SG+ D K+W +
Sbjct: 179 TFTGHTGDVMSLSLA--------PDTRLFV-SGACDASAKLWDV 213
>UNIPROTKB|P62872 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9615 "Canis lupus
familiaris" [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0060041 GO:GO:0007200 GO:GO:0001750
PRINTS:PR00319 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:Z75134
RefSeq:NP_001003236.1 UniGene:Cfa.3773 ProteinModelPortal:P62872
SMR:P62872 STRING:P62872 PRIDE:P62872 Ensembl:ENSCAFT00000030502
Ensembl:ENSCAFT00000035727 GeneID:403912 KEGG:cfa:403912
InParanoid:P62872 NextBio:20817404 Uniprot:P62872
Length = 340
Score = 168 (64.2 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 48/173 (27%), Positives = 83/173 (47%)
Query: 134 KTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVAL 193
+T T+ H V +L+L D L S + D + K+W + C ++ T H+ INA+
Sbjct: 176 QTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTG-HESDINAICF 234
Query: 194 SDDGDVY-TGSADKKIKVW--RRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGAC 250
+G+ + TGS D +++ R +S +++ GI +++ S G +L +G
Sbjct: 235 FPNGNAFATGSDDATCRLFDLRADQELMTYSHDNII----CGITSVSFSKSGRLLLAGYD 290
Query: 251 DRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIW 301
D + VW+ + D G L GH + C+ V D V +GS D ++IW
Sbjct: 291 DFNCNVWDALKADR----AGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 123 (48.4 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 41/164 (25%), Positives = 68/164 (41%)
Query: 194 SDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRS 253
+D + + S D K+ +W NK H++ +S + A + G+ + G D
Sbjct: 65 TDSRLLVSASQDGKLIIWDSYTTNKVHAI----PLRSSWVMTCAYAPSGNYVACGGLDNI 120
Query: 254 IIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD-LVCSGSADKTIRIWRGIDRNYTCLA 312
++ + +GN+ V L GHT + C + D + + S D T +W I+
Sbjct: 121 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALW-DIETGQQT-T 178
Query: 313 VLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
GH G V L+ A DT V SG+ D K+W +
Sbjct: 179 TFTGHTGDVMSLSLA--------PDTRLFV-SGACDASAKLWDV 213
>UNIPROTKB|P62873 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0001917
"photoreceptor inner segment" evidence=IEA] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IEA] [GO:0044297
"cell body" evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IPI]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0007213
"G-protein coupled acetylcholine receptor signaling pathway"
evidence=TAS] [GO:0007265 "Ras protein signal transduction"
evidence=TAS] [GO:0003924 "GTPase activity" evidence=IDA]
[GO:0005834 "heterotrimeric G-protein complex" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0006112 "energy
reserve metabolic process" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0007596 "blood coagulation"
evidence=TAS] [GO:0030168 "platelet activation" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=ISS] [GO:0071380 "cellular response to
prostaglandin E stimulus" evidence=ISS] [GO:0071870 "cellular
response to catecholamine stimulus" evidence=ISS] [GO:0005622
"intracellular" evidence=ISS] [GO:0016020 "membrane" evidence=ISS]
[GO:0006184 "GTP catabolic process" evidence=IDA;TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0007265 GO:GO:0030168 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006112 GO:GO:0004871 EMBL:CH471183 GO:GO:0060041
GO:GO:0007204 GO:GO:0007213 GO:GO:0007200
Pathway_Interaction_DB:lysophospholipid_pathway GO:GO:0071377
GO:GO:0007191 GO:GO:0071870 GO:GO:0071380
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:er_nongenomic_pathway
Pathway_Interaction_DB:txa2pathway GO:GO:0001750
Pathway_Interaction_DB:rhodopsin_pathway PRINTS:PR00319
EMBL:AL109917 EMBL:AL031282
Pathway_Interaction_DB:wnt_calcium_pathway GO:GO:0050909
GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:X04526 EMBL:AF501882 EMBL:BT007305
EMBL:CR456784 EMBL:BC004186 EMBL:BC005888 EMBL:BC008991 EMBL:M36430
IPI:IPI00026268 PIR:A24853 RefSeq:NP_002065.1 UniGene:Hs.430425
ProteinModelPortal:P62873 SMR:P62873 DIP:DIP-599N IntAct:P62873
MINT:MINT-94562 STRING:P62873 PhosphoSite:P62873 DMDM:51317302
OGP:P62873 REPRODUCTION-2DPAGE:IPI00026268 PaxDb:P62873
PRIDE:P62873 DNASU:2782 Ensembl:ENST00000378606
Ensembl:ENST00000378609 GeneID:2782 KEGG:hsa:2782 UCSC:uc001aif.3
GeneCards:GC01M001748 HGNC:HGNC:4396 HPA:HPA040736 MIM:139380
neXtProt:NX_P62873 PharmGKB:PA28776 InParanoid:P62873
PhylomeDB:P62873 ChiTaRS:GNB1 EvolutionaryTrace:P62873
GenomeRNAi:2782 NextBio:10959 ArrayExpress:P62873 Bgee:P62873
CleanEx:HS_GNB1 Genevestigator:P62873 GermOnline:ENSG00000078369
Uniprot:P62873
Length = 340
Score = 168 (64.2 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 48/173 (27%), Positives = 83/173 (47%)
Query: 134 KTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVAL 193
+T T+ H V +L+L D L S + D + K+W + C ++ T H+ INA+
Sbjct: 176 QTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTG-HESDINAICF 234
Query: 194 SDDGDVY-TGSADKKIKVW--RRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGAC 250
+G+ + TGS D +++ R +S +++ GI +++ S G +L +G
Sbjct: 235 FPNGNAFATGSDDATCRLFDLRADQELMTYSHDNII----CGITSVSFSKSGRLLLAGYD 290
Query: 251 DRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIW 301
D + VW+ + D G L GH + C+ V D V +GS D ++IW
Sbjct: 291 DFNCNVWDALKADR----AGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 123 (48.4 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 41/164 (25%), Positives = 68/164 (41%)
Query: 194 SDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRS 253
+D + + S D K+ +W NK H++ +S + A + G+ + G D
Sbjct: 65 TDSRLLVSASQDGKLIIWDSYTTNKVHAI----PLRSSWVMTCAYAPSGNYVACGGLDNI 120
Query: 254 IIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD-LVCSGSADKTIRIWRGIDRNYTCLA 312
++ + +GN+ V L GHT + C + D + + S D T +W I+
Sbjct: 121 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALW-DIETGQQT-T 178
Query: 313 VLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
GH G V L+ A DT V SG+ D K+W +
Sbjct: 179 TFTGHTGDVMSLSLA--------PDTRLFV-SGACDASAKLWDV 213
>MGI|MGI:95781 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein),
beta 1" species:10090 "Mus musculus" [GO:0001664 "G-protein coupled
receptor binding" evidence=ISO] [GO:0001750 "photoreceptor outer
segment" evidence=IDA] [GO:0001917 "photoreceptor inner segment"
evidence=ISO] [GO:0003924 "GTPase activity" evidence=ISA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005834
"heterotrimeric G-protein complex" evidence=ISO;ISA;IPI]
[GO:0006184 "GTP catabolic process" evidence=ISO;ISA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISO;IDA;TAS] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IDA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=ISO] [GO:0007603 "phototransduction,
visible light" evidence=ISA] [GO:0008283 "cell proliferation"
evidence=IDA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=ISO] [GO:0030425 "dendrite" evidence=ISO] [GO:0031702
"type 1 angiotensin receptor binding" evidence=ISO] [GO:0042622
"photoreceptor outer segment membrane" evidence=ISO] [GO:0044297
"cell body" evidence=ISO] [GO:0050909 "sensory perception of taste"
evidence=IDA] [GO:0051020 "GTPase binding" evidence=ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IMP]
[GO:0071456 "cellular response to hypoxia" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 MGI:MGI:95781 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456
GO:GO:0007603 GO:GO:0004871 GO:GO:0060041 GO:GO:0007204
GO:GO:0007200 GO:GO:0010659 GO:GO:0001750 PRINTS:PR00319
GO:GO:0050909 GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 ChiTaRS:GNB1 EMBL:U29055
EMBL:AB042854 EMBL:BC013058 IPI:IPI00120716 PIR:JC5057
RefSeq:NP_001153488.1 RefSeq:NP_001153489.1 RefSeq:NP_032168.1
UniGene:Mm.2344 ProteinModelPortal:P62874 SMR:P62874 IntAct:P62874
STRING:P62874 PhosphoSite:P62874 PaxDb:P62874 PRIDE:P62874
Ensembl:ENSMUST00000030940 Ensembl:ENSMUST00000105616
Ensembl:ENSMUST00000165335 Ensembl:ENSMUST00000176637 GeneID:14688
KEGG:mmu:14688 InParanoid:P62874 NextBio:286631 Bgee:P62874
Genevestigator:P62874 Uniprot:P62874
Length = 340
Score = 168 (64.2 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 48/173 (27%), Positives = 83/173 (47%)
Query: 134 KTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVAL 193
+T T+ H V +L+L D L S + D + K+W + C ++ T H+ INA+
Sbjct: 176 QTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTG-HESDINAICF 234
Query: 194 SDDGDVY-TGSADKKIKVW--RRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGAC 250
+G+ + TGS D +++ R +S +++ GI +++ S G +L +G
Sbjct: 235 FPNGNAFATGSDDATCRLFDLRADQELMTYSHDNII----CGITSVSFSKSGRLLLAGYD 290
Query: 251 DRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIW 301
D + VW+ + D G L GH + C+ V D V +GS D ++IW
Sbjct: 291 DFNCNVWDALKADR----AGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 123 (48.4 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 41/164 (25%), Positives = 68/164 (41%)
Query: 194 SDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRS 253
+D + + S D K+ +W NK H++ +S + A + G+ + G D
Sbjct: 65 TDSRLLVSASQDGKLIIWDSYTTNKVHAI----PLRSSWVMTCAYAPSGNYVACGGLDNI 120
Query: 254 IIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD-LVCSGSADKTIRIWRGIDRNYTCLA 312
++ + +GN+ V L GHT + C + D + + S D T +W I+
Sbjct: 121 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALW-DIETGQQT-T 178
Query: 313 VLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
GH G V L+ A DT V SG+ D K+W +
Sbjct: 179 TFTGHTGDVMSLSLA--------PDTRLFV-SGACDASAKLWDV 213
>RGD|2718 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein), beta
polypeptide 1" species:10116 "Rattus norvegicus" [GO:0001750
"photoreceptor outer segment" evidence=ISO] [GO:0001917
"photoreceptor inner segment" evidence=IDA] [GO:0003924 "GTPase
activity" evidence=IEA;ISO] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISO;IDA;TAS] [GO:0006184 "GTP catabolic process"
evidence=ISO] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=ISO;IMP;TAS] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA;ISO] [GO:0007204 "elevation of cytosolic calcium ion
concentration" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IEA;ISO] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IDA] [GO:0030425 "dendrite" evidence=IDA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IDA] [GO:0044297
"cell body" evidence=IDA] [GO:0050909 "sensory perception of taste"
evidence=IEA;ISO] [GO:0051020 "GTPase binding" evidence=IEA;ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IEA;ISO]
[GO:0071456 "cellular response to hypoxia" evidence=IDA] [GO:0001664
"G-protein coupled receptor binding" evidence=IMP] [GO:0031702 "type
1 angiotensin receptor binding" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:2718
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GO:GO:0008283 GO:GO:0030425 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456 GO:GO:0007186
GO:GO:0004871 GO:GO:0060041 GO:GO:0007204 GO:GO:0007200 PDB:3SN6
PDBsum:3SN6 GO:GO:0001917 GO:GO:0010659 GO:GO:0044297 PRINTS:PR00319
GO:GO:0042622 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:U34958 EMBL:U88324 EMBL:AY552805 EMBL:BC078809
IPI:IPI00212655 RefSeq:NP_112249.2 UniGene:Rn.126047
ProteinModelPortal:P54311 SMR:P54311 DIP:DIP-37029N IntAct:P54311
MINT:MINT-1795773 STRING:P54311 PhosphoSite:P54311 PRIDE:P54311
Ensembl:ENSRNOT00000041789 GeneID:24400 KEGG:rno:24400
InParanoid:P54311 EvolutionaryTrace:P54311 NextBio:603199
ArrayExpress:P54311 Genevestigator:P54311
GermOnline:ENSRNOG00000016638 Uniprot:P54311
Length = 340
Score = 168 (64.2 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 48/173 (27%), Positives = 83/173 (47%)
Query: 134 KTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVAL 193
+T T+ H V +L+L D L S + D + K+W + C ++ T H+ INA+
Sbjct: 176 QTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTG-HESDINAICF 234
Query: 194 SDDGDVY-TGSADKKIKVW--RRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGAC 250
+G+ + TGS D +++ R +S +++ GI +++ S G +L +G
Sbjct: 235 FPNGNAFATGSDDATCRLFDLRADQELMTYSHDNII----CGITSVSFSKSGRLLLAGYD 290
Query: 251 DRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIW 301
D + VW+ + D G L GH + C+ V D V +GS D ++IW
Sbjct: 291 DFNCNVWDALKADR----AGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 123 (48.4 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 41/164 (25%), Positives = 68/164 (41%)
Query: 194 SDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRS 253
+D + + S D K+ +W NK H++ +S + A + G+ + G D
Sbjct: 65 TDSRLLVSASQDGKLIIWDSYTTNKVHAI----PLRSSWVMTCAYAPSGNYVACGGLDNI 120
Query: 254 IIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD-LVCSGSADKTIRIWRGIDRNYTCLA 312
++ + +GN+ V L GHT + C + D + + S D T +W I+
Sbjct: 121 CSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALW-DIETGQQT-T 178
Query: 313 VLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
GH G V L+ A DT V SG+ D K+W +
Sbjct: 179 TFTGHTGDVMSLSLA--------PDTRLFV-SGACDASAKLWDV 213
>UNIPROTKB|Q5BJ90 [details] [associations]
symbol:wdr12 "Ribosome biogenesis protein wdr12"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000463
"maturation of LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0000466
"maturation of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0005654
"nucleoplasm" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0008283 "cell proliferation" evidence=ISS] [GO:0030687
"preribosome, large subunit precursor" evidence=ISS] [GO:0070545
"PeBoW complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030687 GO:GO:0070545
GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154
KO:K14863 HOGENOM:HOG000264464 HAMAP:MF_03029 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:BC091577 RefSeq:NP_001025628.1 UniGene:Str.36786 HSSP:Q02793
ProteinModelPortal:Q5BJ90 STRING:Q5BJ90 Ensembl:ENSXETT00000047773
GeneID:595016 KEGG:xtr:595016 Xenbase:XB-GENE-945426 OMA:DNSIGFW
Bgee:Q5BJ90 Uniprot:Q5BJ90
Length = 423
Score = 170 (64.9 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 73/293 (24%), Positives = 126/293 (43%)
Query: 18 HNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFS-SELDQEFLSNNNIVAVGKGAVKSLVV 76
H+ +VSS+A +++ TGS D R W + + + ++ V K ++ L
Sbjct: 100 HDDWVSSIAGTEEWILTGSYDKTCRIWSLEGKTIMTITGHTEAVKDVTWVKKDSLSCL-- 157
Query: 77 LADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLGDRAIKLLMPKNHVQIRRHKTC 136
L SA D I++W+ N + ++ L A + V R K C
Sbjct: 158 ----LLSASIDQTIQLWEWNTER------NKIKALHCCRGHAGSV--DSIAVDASRTKFC 205
Query: 137 T--WVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKC--LESIT-NAHDDAINAV 191
+ W + SA+ +++ Y + DR K +T + +T + H +A+++V
Sbjct: 206 SGSWDKMLKIWSAVPSEEEDE--YEETSDRPRKKQKTEKMGLTRIPIVTLSGHSEAVSSV 263
Query: 192 ALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACD 251
SD ++ + S D IK+W G K +L N N ++ S L SG+ D
Sbjct: 264 LWSDVDEICSASWDHNIKIWDVETGTVKSTLAG-----NKVFNCISYSPLSQRLASGSTD 318
Query: 252 RSIIVWEKEEDDGNILVVGALRGHT---KSILCMAVVSDLVCSGSADKTIRIW 301
R I +W+ DG+ LV+ +L HT S+ + SGS DK +++W
Sbjct: 319 RHIRLWDPRSKDGS-LVLCSLTSHTGWVTSVKWSPSHEQQLVSGSLDKLVKLW 370
Score = 133 (51.9 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 36/125 (28%), Positives = 65/125 (52%)
Query: 184 HDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLE--RHNSGINALALSCD 241
HDD ++++A +++ + TGS DK ++W G ++ E + + + +LSC
Sbjct: 100 HDDWVSSIAGTEEW-ILTGSYDKTCRIWSLE-GKTIMTITGHTEAVKDVTWVKKDSLSC- 156
Query: 242 GSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLV--CSGSADKTIR 299
+L S + D++I +WE + I + RGH S+ +AV + CSGS DK ++
Sbjct: 157 --LLLSASIDQTIQLWEWNTERNKIKALHCCRGHAGSVDSIAVDASRTKFCSGSWDKMLK 214
Query: 300 IWRGI 304
IW +
Sbjct: 215 IWSAV 219
Score = 124 (48.7 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 63/245 (25%), Positives = 107/245 (43%)
Query: 134 KTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWR-TSDFKCLESI--TNAHDDAINA 190
K TWV D++S L L S S D+TI++W ++ ++++ H ++++
Sbjct: 144 KDVTWVKK-DSLSCLLL--------SASIDQTIQLWEWNTERNKIKALHCCRGHAGSVDS 194
Query: 191 VALSDDGDVY-TGSADKKIKVWRRSPGNKKHSLVDVLER--HNSGINALALSCDGSVLYS 247
+A+ + +GS DK +K+W P ++ + +R + L+ V S
Sbjct: 195 IAVDASRTKFCSGSWDKMLKIWSAVPSEEEDEYEETSDRPRKKQKTEKMGLTRIPIVTLS 254
Query: 248 GACDR-SIIVWEKEED------DGNILVVGALRGHTKSIL-------CMAV--VSDLVCS 291
G + S ++W ++ D NI + G KS L C++ +S + S
Sbjct: 255 GHSEAVSSVLWSDVDEICSASWDHNIKIWDVETGTVKSTLAGNKVFNCISYSPLSQRLAS 314
Query: 292 GSADKTIRIW--RGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDC 349
GS D+ IR+W R D + L L H G V + + S LV SGSLD
Sbjct: 315 GSTDRHIRLWDPRSKDGSLV-LCSLTSHTGWVTSV-------KWSPSHEQQLV-SGSLDK 365
Query: 350 DIKVW 354
+K+W
Sbjct: 366 LVKLW 370
>UNIPROTKB|B3KPU1 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246 EMBL:AC009488
HOGENOM:HOG000176356 HOVERGEN:HBG000188 UniGene:Hs.185172
HGNC:HGNC:4398 EMBL:AK056750 IPI:IPI00924758 SMR:B3KPU1
STRING:B3KPU1 Ensembl:ENST00000419828 Ensembl:ENST00000427895
Uniprot:B3KPU1
Length = 240
Score = 161 (61.7 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 49/173 (28%), Positives = 81/173 (46%)
Query: 134 KTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVAL 193
+T + H V +L+L D S + D +IK+W D C ++ H+ INAVA
Sbjct: 76 QTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIG-HESDINAVAF 134
Query: 194 SDDGDVYT-GSADKKIKVW--RRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGAC 250
+G +T GS D +++ R +S +++ GI ++A S G +L +G
Sbjct: 135 FPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNII----CGITSVAFSRSGRLLLAGYD 190
Query: 251 DRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIW 301
D + +W+ + D G L GH + C+ V D V +GS D ++IW
Sbjct: 191 DFNCNIWDAMKGDR----AGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 239
Score = 113 (44.8 bits), Expect = 0.00042, P = 0.00042
Identities = 48/217 (22%), Positives = 86/217 (39%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H +S D ++ S S D T +W + H + +++L+ DG +
Sbjct: 42 HTGYLSCCRFLDDNQIITS-SGDTTCALWDIETGQQTVGFAG-HSGDVMSLSLAPDGRTF 99
Query: 201 -TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEK 259
+G+ D IK+W + + + H S INA+A +G +G+ D + +++
Sbjct: 100 VSGACDASIKLWDVRDSMCRQTFIG----HESDINAVAFFPNGYAFTTGSDDATCRLFDL 155
Query: 260 EEDDGNILVV--GALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGH 317
D ++ + G T + + L+ +G D IW + + VL GH
Sbjct: 156 RADQELLMYSHDNIICGITS--VAFSRSGRLLLAGYDDFNCNIWDAMKGDRA--GVLAGH 211
Query: 318 RGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVW 354
V CL +D V +GS D +K+W
Sbjct: 212 DNRVSCLGV---------TDDGMAVATGSWDSFLKIW 239
>UNIPROTKB|G3V5X7 [details] [associations]
symbol:TEP1 "Telomerase protein component 1" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR008858 InterPro:IPR015943
Pfam:PF00400 Pfam:PF05731 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50988 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003723 GO:GO:0030529
EMBL:AL355075 InterPro:IPR007111 PROSITE:PS50837 HGNC:HGNC:11726
ChiTaRS:TEP1 InterPro:IPR025139 InterPro:IPR008850 Pfam:PF13271
Pfam:PF05386 PROSITE:PS51226 Ensembl:ENST00000556935
ArrayExpress:G3V5X7 Bgee:G3V5X7 Uniprot:G3V5X7
Length = 2519
Score = 189 (71.6 bits), Expect = 6.3e-10, Sum P(2) = 6.3e-10
Identities = 87/364 (23%), Positives = 152/364 (41%)
Query: 12 LTTLKGHNSYVSS-LAL-AGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKG 69
L H+ +V++ L L AG L T D +V+ W S L + + +++
Sbjct: 1769 LAAFPAHHGFVAAALFLHAGCQLLTAGEDGKVQVW-----SGSLGRP-RGHLGSLSLSPA 1822
Query: 70 AVKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLGDRAIKLLMP---KN 126
+L D++ ++ IR++KI++ Q + L + K+L+
Sbjct: 1823 LSVALSPDGDRVAVGYRADGIRIYKISSGSQGAQGQALDVAVSALAWLSPKVLVSGAEDG 1882
Query: 127 HVQIRRHKTCT----WVHHVDAVSALALTKDETLLYSVSWDRTIKIW---------RTSD 173
+Q K C+ W+ L L + LL S S D T+++W + D
Sbjct: 1883 SLQGWALKECSLQSLWLLSRFQKPVLGLATSQELLASASEDFTVQLWPRQLLTRPHKAED 1942
Query: 174 FKCLESITNAHDDAINAVALSDDG-DVYTGSADKKIKVWR-RSPGNKKHSLVDVLER-HN 230
F C + H+ ++ + S DG + TG D+ + W R+P K L+ H
Sbjct: 1943 FPCGTEL-RGHEGPVSCCSFSTDGGSLATGGRDRSLLCWDVRTP--KTPVLIHSFPACHR 1999
Query: 231 SGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVC 290
+ A + D ++L S + D S+ +W+ E G L G GH ++ +A V + V
Sbjct: 2000 DWVTGCAWTKD-NLLISCSSDGSVGLWDPES--GQRL--GQFLGHQSAVSAVAAVEEHVV 2054
Query: 291 SGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCD 350
S S D T+++W D L + H GP+ AAA++ + LV + LD
Sbjct: 2055 SVSRDGTLKVW---DHQGVELTSIPAHSGPISHCAAAMEPRAAGQPGSELLVVTVGLDGA 2111
Query: 351 IKVW 354
++W
Sbjct: 2112 TRLW 2115
Score = 38 (18.4 bits), Expect = 6.3e-10, Sum P(2) = 6.3e-10
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 341 LVCSGSLDCDIKVWQ 355
L+ + S D D+K+W+
Sbjct: 2459 LLVTASKDRDVKLWE 2473
>ASPGD|ASPL0000015866 [details] [associations]
symbol:AN8183 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003676 EMBL:BN001302 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0030529 OMA:VWQCDTP InterPro:IPR027145
InterPro:IPR007148 PANTHER:PTHR19858 Pfam:PF04003
ProteinModelPortal:C8V743 EnsemblFungi:CADANIAT00004225
Uniprot:C8V743
Length = 851
Score = 171 (65.3 bits), Expect = 6.5e-10, Sum P(2) = 6.5e-10
Identities = 58/191 (30%), Positives = 88/191 (46%)
Query: 145 VSALALTKD-ETLLYSVSWDRTIKIWR-TSDFKCLESITNAHDDAINAVALSDDGD-VYT 201
+ +++ K E L + S + +W S+ L+ H D++NA+A S DG + T
Sbjct: 298 IDVVSINKTGEWLAFGSSKFGQLLVWEWQSESYILKQ--QGHLDSMNALAYSPDGQRIVT 355
Query: 202 GSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEE 261
+ D KIKVW G LV E H SG+ A S G+VL++ + D S+ W+
Sbjct: 356 AADDGKIKVWDVKSG---FCLVTFTE-HTSGVTACQFSKKGNVLFTSSLDGSVRAWDLIR 411
Query: 262 DDGNILVVGALRGHTKSILCMAVVSDLVCSGSADK-TIRIWRGIDRNYTCLAVLEGHRGP 320
N A + S L + +++C+GS D I +W + L L GH GP
Sbjct: 412 YR-NFRTFTAPSRLSFSSLAVDPSGEVICAGSPDSFDIHVW-SVQTGQL-LDQLSGHEGP 468
Query: 321 VKCLAAAIDND 331
V LA A D +
Sbjct: 469 VSALAFAADGN 479
Score = 121 (47.7 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 43/170 (25%), Positives = 75/170 (44%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDV- 199
H+D+++ALA + D + + + D IK+W CL + T H + A S G+V
Sbjct: 337 HLDSMNALAYSPDGQRIVTAADDGKIKVWDVKSGFCLVTFTE-HTSGVTACQFSKKGNVL 395
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDR-SIIVWE 258
+T S D ++ W + + ++LA+ G V+ +G+ D I VW
Sbjct: 396 FTSSLDGSVRAWDLI---RYRNFRTFTAPSRLSFSSLAVDPSGEVICAGSPDSFDIHVWS 452
Query: 259 KEEDDGNILVVGALRGHTKSILCMAVVSD---LVCSGSADKTIRIWRGID 305
+ G +L L GH + +A +D L+ S +++ GID
Sbjct: 453 VQT--GQLL--DQLSGHEGPVSALAFAADGNHLLTFWSVADAVQV-AGID 497
Score = 111 (44.1 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 30/111 (27%), Positives = 53/111 (47%)
Query: 137 TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDD 196
T+ H V+A +K +L++ S D +++ W ++ + T + +++A+
Sbjct: 375 TFTEHTSGVTACQFSKKGNVLFTSSLDGSVRAWDLIRYRNFRTFTAPSRLSFSSLAVDPS 434
Query: 197 GDVY-TGSADK-KIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVL 245
G+V GS D I VW G L+D L H ++ALA + DG+ L
Sbjct: 435 GEVICAGSPDSFDIHVWSVQTGQ----LLDQLSGHEGPVSALAFAADGNHL 481
Score = 55 (24.4 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 24/88 (27%), Positives = 41/88 (46%)
Query: 12 LTTLKGHNSYVSSLALAGKFLYTGSSD-NEVRSWDCNTFSSELDQE-FLSNNNIVAVGKG 69
L ++ N V S+ G++L GSS ++ W+ + S L Q+ L + N +A
Sbjct: 290 LLSISQSNIDVVSINKTGEWLAFGSSKFGQLLVWEWQSESYILKQQGHLDSMNALAYSPD 349
Query: 70 AVKSLVVLADKLFSAHQDHKIRVWKINN 97
+ +V AD D KI+VW + +
Sbjct: 350 GQR-IVTAAD-------DGKIKVWDVKS 369
Score = 47 (21.6 bits), Expect = 6.5e-10, Sum P(2) = 6.5e-10
Identities = 21/92 (22%), Positives = 40/92 (43%)
Query: 15 LKGHNSYVSSLALAG--KFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAVK 72
L GH V + + +FL T S D R W LD E ++ + V+
Sbjct: 147 LAGHFDEVQHIEWSSDSRFLLTASKDLTARVWS-------LDPEDGFEPTTLSGHRQGVR 199
Query: 73 SLVVLADK--LFSAHQDHKIRVWK-INNQEPD 101
+ AD+ +++ +D + W+ ++ ++PD
Sbjct: 200 AAFFSADQESIYTVSRDCALFRWEYVSKKDPD 231
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 169 (64.5 bits), Expect = 6.5e-10, P = 6.5e-10
Identities = 68/241 (28%), Positives = 107/241 (44%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWR-TSDFKCLESITNAHDDAINAVALSDDGD- 198
H D+V +A LL S S D +IK+W ++C++++ + HD +++VA GD
Sbjct: 149 HTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQSYECIKTM-HGHDHNVSSVAFVPAGDY 207
Query: 199 VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWE 258
V + S D+ IK+W + G V H + + + +GS+ + + D++I VW
Sbjct: 208 VLSASRDRTIKMWEVATGY----CVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWL 263
Query: 259 KEEDDGNILVVGALRGHTKSILCMA--------VVSD--------------LVCSGSADK 296
D + LR H ++ C+A +++ + SGS DK
Sbjct: 264 TNSKDCKV----ELRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDK 319
Query: 297 TIRIWRGIDRNY-TCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQ 355
TIRIW D + CL L GH V+ LA YLV S S D I+VW
Sbjct: 320 TIRIW---DVSVGLCLLTLSGHDNWVRGLAF--------HPGGKYLV-SASDDKTIRVWD 367
Query: 356 I 356
+
Sbjct: 368 L 368
Score = 164 (62.8 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 58/221 (26%), Positives = 97/221 (43%)
Query: 156 LLYSVSWDRTIKIWRTSDFKC--LESITNAHDDAINAVALSDDGDVYTG-SADKKIKVWR 212
L+ S S D TI+IW DF+ E H D++ VA G + SAD IK+W
Sbjct: 122 LMVSASEDATIRIW---DFETGEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLW- 177
Query: 213 RSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGAL 272
+ + + + H+ ++++A G + S + DR+I +WE V
Sbjct: 178 --DFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATG----YCVKTY 231
Query: 273 RGHTKSILCMAV--VSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLA----- 325
GH + + + V + + S D+TIR+W + + C L H V+C+A
Sbjct: 232 TGHREWVRMVRVHIEGSIFATCSNDQTIRVW--LTNSKDCKVELRDHEHTVECIAWAPEA 289
Query: 326 -AAIDNDRC--DSSDTSY---LVCSGSLDCDIKVWQISFPL 360
A+ N+ D+ + + SGS D I++W +S L
Sbjct: 290 AASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDVSVGL 330
Score = 162 (62.1 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 81/304 (26%), Positives = 133/304 (43%)
Query: 81 LFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLG-DRAIKLLMPKN-HVQIR------R 132
+ SA +D IR+W E + ++ + D KLL + + I+
Sbjct: 123 MVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQS 182
Query: 133 HKTCTWVH-HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAV 191
++ +H H VS++A + S S DRTIK+W + C+++ T H + + V
Sbjct: 183 YECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTG-HREWVRMV 241
Query: 192 ALSDDGDVY-TGSADKKIKVWRRSPGNKKHSLVD----------VLERHNSGINALALSC 240
+ +G ++ T S D+ I+VW + + K L D E S IN A +
Sbjct: 242 RVHIEGSIFATCSNDQTIRVWLTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGAD 301
Query: 241 D------GSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVV--SDLVCSG 292
+ G L SG+ D++I +W+ G L+ L GH + +A + S
Sbjct: 302 NKKGHHQGPFLASGSRDKTIRIWDVSV--GLCLLT--LSGHDNWVRGLAFHPGGKYLVSA 357
Query: 293 SADKTIRIWRGID-RNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDI 351
S DKTIR+W D RN C+ L H+ +ID + Y++ SGS+D +
Sbjct: 358 SDDKTIRVW---DLRNKRCMKTLYAHQH----FCTSIDFHKAHP----YVI-SGSVDQTV 405
Query: 352 KVWQ 355
KVW+
Sbjct: 406 KVWE 409
Score = 114 (45.2 bits), Expect = 0.00097, P = 0.00097
Identities = 69/320 (21%), Positives = 133/320 (41%)
Query: 14 TLKGHNSYVSSLALAGKF--LYTGSSDNEVRSWDCNT--FSSELDQEFLSNNNIV--AVG 67
+L GH + ++ + F + + S D +R WD T + L S ++ A G
Sbjct: 103 SLTGHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQG 162
Query: 68 KGAVKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLGDRAIKLLMPKNH 127
K L+ KL+ Q ++ + ++ DH + +A +P GD + +
Sbjct: 163 KLLASCSADLSIKLWDFQQSYEC-IKTMHGH--DHN-VSSVAFVPA-GDYVLSASRDRT- 216
Query: 128 VQIRRHKT--C--TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA 183
+++ T C T+ H + V + + + ++ + S D+TI++W T+ C + +
Sbjct: 217 IKMWEVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVELRD- 275
Query: 184 HDDAINAVALSDDGDVYT----GSADKKIKVWRRSP----GNKKHSL----VDV------ 225
H+ + +A + + AD K K + P G++ ++ V V
Sbjct: 276 HEHTVECIAWAPEAAASAINEAAGADNK-KGHHQGPFLASGSRDKTIRIWDVSVGLCLLT 334
Query: 226 LERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAV- 284
L H++ + LA G L S + D++I VW+ N + L H C ++
Sbjct: 335 LSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLR----NKRCMKTLYAHQH--FCTSID 388
Query: 285 ---VSDLVCSGSADKTIRIW 301
V SGS D+T+++W
Sbjct: 389 FHKAHPYVISGSVDQTVKVW 408
>UNIPROTKB|Q2KJJ5 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 GO:GO:0032040 HSSP:P63005 EMBL:BC105313
IPI:IPI00711976 RefSeq:NP_001040084.2 UniGene:Bt.20483
ProteinModelPortal:Q2KJJ5 STRING:Q2KJJ5 PRIDE:Q2KJJ5 GeneID:618429
KEGG:bta:618429 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
InParanoid:Q2KJJ5 KO:K14555 OrthoDB:EOG42JNQR NextBio:20901180
Uniprot:Q2KJJ5
Length = 800
Score = 163 (62.4 bits), Expect = 6.7e-10, Sum P(2) = 6.7e-10
Identities = 59/240 (24%), Positives = 113/240 (47%)
Query: 136 CTWVH-HVDAVSALALTKDETLLYSVSWDRTIKIWR---TSDFKCLESITNAHDDAINAV 191
C +H H D V AL + + L S + D++I++WR + + C+ + H ++ +
Sbjct: 369 CQILHGHTDIVLALDVFRKGRLFASCAKDQSIRVWRMNKSGEVACVAQ-GSGHTHSVGTI 427
Query: 192 ALSDDGDVY--TGSADKKIKVW-------RRSPGNKKHSL---VDVLER-HNSGINALAL 238
S + + TGS D +K+W + G++ + + H+ IN++A+
Sbjct: 428 CCSRLKETFLVTGSQDCTVKLWPLPEALLSKGTGHEGGPVFLQAQATQHCHDKDINSVAV 487
Query: 239 SCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCM--AVVSDLVCSGSADK 296
+ + +L +G+ DR+ +W ++G GH + + C+ + + ++ + SAD
Sbjct: 488 APNDKLLATGSQDRTAKLWALPRCQ----LLGTFSGHRRGLWCVQFSPMDQVLATASADG 543
Query: 297 TIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
TI++W D ++CL EGH V +A S + L+ SGS D +K+W I
Sbjct: 544 TIKLWALQD--FSCLKTFEGHDASVLKVAFV--------SRGTQLLSSGS-DGLLKLWTI 592
Score = 125 (49.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 43/173 (24%), Positives = 78/173 (45%)
Query: 154 ETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDG-DVYTGSADKKIKVWR 212
+ +L + S D TIK+W DF CL++ HD ++ VA G + + +D +K+W
Sbjct: 533 DQVLATASADGTIKLWALQDFSCLKTF-EGHDASVLKVAFVSRGTQLLSSGSDGLLKLWT 591
Query: 213 RSPGNKKHSLVDVLERHNSGINALALS-CDGSVLYSGACDRSIIVWEKEEDDGNILVVGA 271
K + V L+ H + L S D L +GA D +++W K+ + A
Sbjct: 592 I----KNNECVRTLDAHEDKVWGLHCSRLDDRAL-TGASDSRVVLW-KDVTEAEQAEEQA 645
Query: 272 LRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEG-HRGPVKC 323
R + ++ + +L+ + + + +DR +T L V++ R P C
Sbjct: 646 KR--EEQVVKQQELDNLLHEKRYLRALGLAISLDRPHTVLTVIQAIRRDPESC 696
Score = 120 (47.3 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 53/214 (24%), Positives = 89/214 (41%)
Query: 156 LLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALS-DDGDVYTGSADKKIKVWRRS 214
LL SV+ D + ++ + + ++ ++ L +D V S +KV+
Sbjct: 306 LLLSVTADHNLLLYDARSLRLRKQFAGYSEEVLDVRFLGPEDSHVVVASNSPCLKVF--- 362
Query: 215 PGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRG 274
+ + S +L H + AL + G + S A D+SI VW + G + V G
Sbjct: 363 --DLQTSACQILHGHTDIVLALDVFRKGRLFASCAKDQSIRVWRMNKS-GEVACVAQGSG 419
Query: 275 HTKS---ILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGHRG-PVKCLAAAIDN 330
HT S I C + + +GS D T+++W + L+ GH G PV A A +
Sbjct: 420 HTHSVGTICCSRLKETFLVTGSQDCTVKLWPLPE---ALLSKGTGHEGGPVFLQAQATQH 476
Query: 331 DRCDSSDTSY--------LVCSGSLDCDIKVWQI 356
C D + L+ +GS D K+W +
Sbjct: 477 --CHDKDINSVAVAPNDKLLATGSQDRTAKLWAL 508
Score = 55 (24.4 bits), Expect = 6.7e-10, Sum P(2) = 6.7e-10
Identities = 22/84 (26%), Positives = 35/84 (41%)
Query: 18 HNSYVSSLAL--AGKFLYTGSSDNEVRSWDC-NTFSSELDQEFLSNNNIVAVGKGAVKSL 74
H + V+++A L TG D VR WD + + + ++VA + L
Sbjct: 108 HTAPVATMAFDPTSTLLATGGCDGAVRVWDVVRCYGTHHFRGSPGVVHLVAFHPDPARLL 167
Query: 75 VVLADKLFSAHQDHKIRVWKINNQ 98
LFS+ D IRVW + +
Sbjct: 168 ------LFSSAADTSIRVWSLQER 185
Score = 51 (23.0 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 23/95 (24%), Positives = 38/95 (40%)
Query: 5 SVVDHHCLTTLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTF-SSELDQEFLSNN 61
S+ + CL L H S V+SL + G + + D WD + ++ F S
Sbjct: 181 SLQERSCLAVLTAHYSAVTSLTFSADGHTMLSSGRDKICVIWDLRSLQATRTVPVFESVE 240
Query: 62 NIVAVGKGAVKSLVVLADKL--FSAHQDHKIRVWK 94
V + + L V + L +A +RVW+
Sbjct: 241 AAVLLPEEPAPELGVKSAGLHFLTAGDQGALRVWE 275
Score = 51 (23.0 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 11 CLTTLKGHNSYVSSLA---LAGKFLYTGSSDNEVRSW 44
C+ GH V ++ L FL TGS D V+ W
Sbjct: 413 CVAQGSGHTHSVGTICCSRLKETFLVTGSQDCTVKLW 449
Score = 49 (22.3 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 29/97 (29%), Positives = 40/97 (41%)
Query: 2 HNLSVVDHHCLTTLKGHNSYVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNN 61
HNL + D L K Y S L +FL G D+ V + D + S
Sbjct: 314 HNLLLYDARSLRLRKQFAGY-SEEVLDVRFL--GPEDSHVVVASNSPCLKVFDLQ-TSAC 369
Query: 62 NIVAVGKGAVKSLVVLAD-KLF-SAHQDHKIRVWKIN 96
I+ V +L V +LF S +D IRVW++N
Sbjct: 370 QILHGHTDIVLALDVFRKGRLFASCAKDQSIRVWRMN 406
>UNIPROTKB|P11017 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9913 "Bos taurus"
[GO:0006184 "GTP catabolic process" evidence=IDA] [GO:0005834
"heterotrimeric G-protein complex" evidence=IDA] [GO:0003924
"GTPase activity" evidence=IDA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GO:GO:0005834 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC140489 EMBL:M16480 EMBL:M36431 EMBL:M16539
IPI:IPI00712819 PIR:A26617 RefSeq:NP_001091030.1 UniGene:Bt.2055
ProteinModelPortal:P11017 SMR:P11017 STRING:P11017 PRIDE:P11017
Ensembl:ENSBTAT00000008508 GeneID:281202 KEGG:bta:281202 CTD:2783
InParanoid:P11017 KO:K04537 OMA:WDIETSQ NextBio:20805258
Uniprot:P11017
Length = 340
Score = 167 (63.8 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 73/303 (24%), Positives = 128/303 (42%)
Query: 14 TLKGHNS--YVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAV 71
TL+GH + Y + L + S D ++ WD T ++++ L ++ ++
Sbjct: 50 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYT-TNKVHAIPLRSSWVMTCAYAPS 108
Query: 72 KSLVVLA--DKLFSAHQDHKIRVW--KINNQEPDHQKYTRLATLPTLGDRAIKLLMPKNH 127
+ V D + S + K R +++ + P H Y L+ L D I
Sbjct: 109 GNFVACGGLDNICSIYS-LKTREGNVRVSRELPGHTGY--LSCCRFLDDNQIITSSGDTT 165
Query: 128 VQI----RRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA 183
+ +T + H V +L+L D S + D +IK+W D C ++
Sbjct: 166 CALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIG- 224
Query: 184 HDDAINAVALSDDGDVYT-GSADKKIKVW--RRSPGNKKHSLVDVLERHNSGINALALSC 240
H+ INAVA +G +T GS D +++ R +S +++ GI ++A S
Sbjct: 225 HESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNII----CGITSVAFSR 280
Query: 241 DGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTI 298
G +L +G D + +W+ + D G L GH + C+ V D V +GS D +
Sbjct: 281 SGRLLLAGYDDFNCNIWDAMKGDR----AGVLAGHDNRVSCLGVTDDGMAVATGSWDSFL 336
Query: 299 RIW 301
+IW
Sbjct: 337 KIW 339
Score = 124 (48.7 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 41/170 (24%), Positives = 73/170 (42%)
Query: 194 SDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRS 253
+D + + S D K+ +W NK H++ +S + A + G+ + G D
Sbjct: 65 TDSRLLVSASQDGKLIIWDSYTTNKVHAI----PLRSSWVMTCAYAPSGNFVACGGLDNI 120
Query: 254 IIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD-LVCSGSADKTIRIWRGIDRNYTCLA 312
++ + +GN+ V L GHT + C + D + + S D T +W I+ +
Sbjct: 121 CSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDTTCALW-DIETGQQTVG 179
Query: 313 VLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQISFPLVR 362
GH G V L+ A D +++ SG+ D IK+W + + R
Sbjct: 180 -FAGHSGDVMSLSLAPDG-------RTFV--SGACDASIKLWDVRDSMCR 219
Score = 113 (44.8 bits), Expect = 0.00091, P = 0.00091
Identities = 48/217 (22%), Positives = 86/217 (39%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H +S D ++ S S D T +W + H + +++L+ DG +
Sbjct: 142 HTGYLSCCRFLDDNQIITS-SGDTTCALWDIETGQQTVGFAG-HSGDVMSLSLAPDGRTF 199
Query: 201 -TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEK 259
+G+ D IK+W + + + H S INA+A +G +G+ D + +++
Sbjct: 200 VSGACDASIKLWDVRDSMCRQTFIG----HESDINAVAFFPNGYAFTTGSDDATCRLFDL 255
Query: 260 EEDDGNILVV--GALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGH 317
D ++ + G T + + L+ +G D IW + + VL GH
Sbjct: 256 RADQELLMYSHDNIICGITS--VAFSRSGRLLLAGYDDFNCNIWDAMKGDRA--GVLAGH 311
Query: 318 RGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVW 354
V CL +D V +GS D +K+W
Sbjct: 312 DNRVSCLGV---------TDDGMAVATGSWDSFLKIW 339
>UNIPROTKB|E2RD95 [details] [associations]
symbol:GNB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537
EMBL:AAEX03004274 RefSeq:XP_536861.2 ProteinModelPortal:E2RD95
SMR:E2RD95 PRIDE:E2RD95 Ensembl:ENSCAFT00000038242 GeneID:479733
KEGG:cfa:479733 NextBio:20854866 Uniprot:E2RD95
Length = 340
Score = 167 (63.8 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 73/303 (24%), Positives = 128/303 (42%)
Query: 14 TLKGHNS--YVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAV 71
TL+GH + Y + L + S D ++ WD T ++++ L ++ ++
Sbjct: 50 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYT-TNKVHAIPLRSSWVMTCAYAPS 108
Query: 72 KSLVVLA--DKLFSAHQDHKIRVW--KINNQEPDHQKYTRLATLPTLGDRAIKLLMPKNH 127
+ V D + S + K R +++ + P H Y L+ L D I
Sbjct: 109 GNFVACGGLDNICSIYS-LKTREGNVRVSRELPGHTGY--LSCCRFLDDNQIITSSGDTT 165
Query: 128 VQI----RRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA 183
+ +T + H V +L+L D S + D +IK+W D C ++
Sbjct: 166 CALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIG- 224
Query: 184 HDDAINAVALSDDGDVYT-GSADKKIKVW--RRSPGNKKHSLVDVLERHNSGINALALSC 240
H+ INAVA +G +T GS D +++ R +S +++ GI ++A S
Sbjct: 225 HESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNII----CGITSVAFSR 280
Query: 241 DGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTI 298
G +L +G D + +W+ + D G L GH + C+ V D V +GS D +
Sbjct: 281 SGRLLLAGYDDFNCNIWDAMKGDR----AGVLAGHDNRVSCLGVTDDGMAVATGSWDSFL 336
Query: 299 RIW 301
+IW
Sbjct: 337 KIW 339
Score = 124 (48.7 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 41/170 (24%), Positives = 73/170 (42%)
Query: 194 SDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRS 253
+D + + S D K+ +W NK H++ +S + A + G+ + G D
Sbjct: 65 TDSRLLVSASQDGKLIIWDSYTTNKVHAI----PLRSSWVMTCAYAPSGNFVACGGLDNI 120
Query: 254 IIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD-LVCSGSADKTIRIWRGIDRNYTCLA 312
++ + +GN+ V L GHT + C + D + + S D T +W I+ +
Sbjct: 121 CSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDTTCALW-DIETGQQTVG 179
Query: 313 VLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQISFPLVR 362
GH G V L+ A D +++ SG+ D IK+W + + R
Sbjct: 180 -FAGHSGDVMSLSLAPDG-------RTFV--SGACDASIKLWDVRDSMCR 219
Score = 113 (44.8 bits), Expect = 0.00091, P = 0.00091
Identities = 48/217 (22%), Positives = 86/217 (39%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H +S D ++ S S D T +W + H + +++L+ DG +
Sbjct: 142 HTGYLSCCRFLDDNQIITS-SGDTTCALWDIETGQQTVGFAG-HSGDVMSLSLAPDGRTF 199
Query: 201 -TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEK 259
+G+ D IK+W + + + H S INA+A +G +G+ D + +++
Sbjct: 200 VSGACDASIKLWDVRDSMCRQTFIG----HESDINAVAFFPNGYAFTTGSDDATCRLFDL 255
Query: 260 EEDDGNILVV--GALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGH 317
D ++ + G T + + L+ +G D IW + + VL GH
Sbjct: 256 RADQELLMYSHDNIICGITS--VAFSRSGRLLLAGYDDFNCNIWDAMKGDRA--GVLAGH 311
Query: 318 RGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVW 354
V CL +D V +GS D +K+W
Sbjct: 312 DNRVSCLGV---------TDDGMAVATGSWDSFLKIW 339
>UNIPROTKB|P62879 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005246
"calcium channel regulator activity" evidence=IEA] [GO:0043234
"protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0051020 "GTPase binding" evidence=IPI] [GO:0003924 "GTPase
activity" evidence=TAS] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0006112 "energy reserve metabolic process"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0006184 "GTP catabolic process" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0048471
Reactome:REACT_111102 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0006112 GO:GO:0004871 GO:GO:0007204
EMBL:AF053356 GO:GO:0071377 GO:GO:0005246 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 HPA:HPA040736 CTD:2783
KO:K04537 OMA:WDIETSQ EMBL:M16514 EMBL:M36429 EMBL:M16538
EMBL:AF501883 EMBL:BC010073 EMBL:BC012348 EMBL:BC068003
IPI:IPI00003348 PIR:B26617 RefSeq:NP_005264.2 UniGene:Hs.185172
ProteinModelPortal:P62879 SMR:P62879 IntAct:P62879
MINT:MINT-1139073 STRING:P62879 PhosphoSite:P62879 DMDM:51317304
OGP:P62879 REPRODUCTION-2DPAGE:P62879 PaxDb:P62879 PRIDE:P62879
DNASU:2783 Ensembl:ENST00000303210 Ensembl:ENST00000393924
Ensembl:ENST00000393926 GeneID:2783 KEGG:hsa:2783 UCSC:uc003uwb.3
GeneCards:GC07P100271 HGNC:HGNC:4398 HPA:CAB010032 MIM:139390
neXtProt:NX_P62879 PharmGKB:PA28778 InParanoid:P62879
PhylomeDB:P62879 GenomeRNAi:2783 NextBio:10963 ArrayExpress:P62879
Bgee:P62879 CleanEx:HS_GNB2 Genevestigator:P62879
GermOnline:ENSG00000172354 Uniprot:P62879
Length = 340
Score = 167 (63.8 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 73/303 (24%), Positives = 128/303 (42%)
Query: 14 TLKGHNS--YVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAV 71
TL+GH + Y + L + S D ++ WD T ++++ L ++ ++
Sbjct: 50 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYT-TNKVHAIPLRSSWVMTCAYAPS 108
Query: 72 KSLVVLA--DKLFSAHQDHKIRVW--KINNQEPDHQKYTRLATLPTLGDRAIKLLMPKNH 127
+ V D + S + K R +++ + P H Y L+ L D I
Sbjct: 109 GNFVACGGLDNICSIYS-LKTREGNVRVSRELPGHTGY--LSCCRFLDDNQIITSSGDTT 165
Query: 128 VQI----RRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA 183
+ +T + H V +L+L D S + D +IK+W D C ++
Sbjct: 166 CALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIG- 224
Query: 184 HDDAINAVALSDDGDVYT-GSADKKIKVW--RRSPGNKKHSLVDVLERHNSGINALALSC 240
H+ INAVA +G +T GS D +++ R +S +++ GI ++A S
Sbjct: 225 HESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNII----CGITSVAFSR 280
Query: 241 DGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTI 298
G +L +G D + +W+ + D G L GH + C+ V D V +GS D +
Sbjct: 281 SGRLLLAGYDDFNCNIWDAMKGDR----AGVLAGHDNRVSCLGVTDDGMAVATGSWDSFL 336
Query: 299 RIW 301
+IW
Sbjct: 337 KIW 339
Score = 124 (48.7 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 41/170 (24%), Positives = 73/170 (42%)
Query: 194 SDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRS 253
+D + + S D K+ +W NK H++ +S + A + G+ + G D
Sbjct: 65 TDSRLLVSASQDGKLIIWDSYTTNKVHAI----PLRSSWVMTCAYAPSGNFVACGGLDNI 120
Query: 254 IIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD-LVCSGSADKTIRIWRGIDRNYTCLA 312
++ + +GN+ V L GHT + C + D + + S D T +W I+ +
Sbjct: 121 CSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDTTCALW-DIETGQQTVG 179
Query: 313 VLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQISFPLVR 362
GH G V L+ A D +++ SG+ D IK+W + + R
Sbjct: 180 -FAGHSGDVMSLSLAPDG-------RTFV--SGACDASIKLWDVRDSMCR 219
Score = 113 (44.8 bits), Expect = 0.00091, P = 0.00091
Identities = 48/217 (22%), Positives = 86/217 (39%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H +S D ++ S S D T +W + H + +++L+ DG +
Sbjct: 142 HTGYLSCCRFLDDNQIITS-SGDTTCALWDIETGQQTVGFAG-HSGDVMSLSLAPDGRTF 199
Query: 201 -TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEK 259
+G+ D IK+W + + + H S INA+A +G +G+ D + +++
Sbjct: 200 VSGACDASIKLWDVRDSMCRQTFIG----HESDINAVAFFPNGYAFTTGSDDATCRLFDL 255
Query: 260 EEDDGNILVV--GALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGH 317
D ++ + G T + + L+ +G D IW + + VL GH
Sbjct: 256 RADQELLMYSHDNIICGITS--VAFSRSGRLLLAGYDDFNCNIWDAMKGDRA--GVLAGH 311
Query: 318 RGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVW 354
V CL +D V +GS D +K+W
Sbjct: 312 DNRVSCLGV---------TDDGMAVATGSWDSFLKIW 339
>MGI|MGI:95784 [details] [associations]
symbol:Gnb2 "guanine nucleotide binding protein (G protein),
beta 2" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=ISA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005246 "calcium channel regulator activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISA] [GO:0006184 "GTP catabolic
process" evidence=ISA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=TAS] [GO:0043234 "protein complex" evidence=ISO]
[GO:0044297 "cell body" evidence=ISO] [GO:0048471 "perinuclear
region of cytoplasm" evidence=ISO] [GO:0051020 "GTPase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:95784 GO:GO:0048471
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871 EMBL:AF312033
GO:GO:0007204 GO:GO:0005246 PRINTS:PR00319 GO:GO:0005834
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537 EMBL:U34960
EMBL:AB045007 EMBL:BC029077 EMBL:BC059942 EMBL:BC062178 EMBL:U38505
IPI:IPI00162780 RefSeq:NP_034442.1 UniGene:Mm.30141
ProteinModelPortal:P62880 SMR:P62880 IntAct:P62880 STRING:P62880
PhosphoSite:P62880 REPRODUCTION-2DPAGE:IPI00162780 PaxDb:P62880
PRIDE:P62880 Ensembl:ENSMUST00000031726 Ensembl:ENSMUST00000150063
GeneID:14693 KEGG:mmu:14693 InParanoid:P62880 ChiTaRS:GNB2
NextBio:286635 Bgee:P62880 Genevestigator:P62880
GermOnline:ENSMUSG00000029713 Uniprot:P62880
Length = 340
Score = 167 (63.8 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 73/303 (24%), Positives = 128/303 (42%)
Query: 14 TLKGHNS--YVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAV 71
TL+GH + Y + L + S D ++ WD T ++++ L ++ ++
Sbjct: 50 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYT-TNKVHAIPLRSSWVMTCAYAPS 108
Query: 72 KSLVVLA--DKLFSAHQDHKIRVW--KINNQEPDHQKYTRLATLPTLGDRAIKLLMPKNH 127
+ V D + S + K R +++ + P H Y L+ L D I
Sbjct: 109 GNFVACGGLDNICSIYS-LKTREGNVRVSRELPGHTGY--LSCCRFLDDNQIITSSGDTT 165
Query: 128 VQI----RRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA 183
+ +T + H V +L+L D S + D +IK+W D C ++
Sbjct: 166 CALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIG- 224
Query: 184 HDDAINAVALSDDGDVYT-GSADKKIKVW--RRSPGNKKHSLVDVLERHNSGINALALSC 240
H+ INAVA +G +T GS D +++ R +S +++ GI ++A S
Sbjct: 225 HESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNII----CGITSVAFSR 280
Query: 241 DGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTI 298
G +L +G D + +W+ + D G L GH + C+ V D V +GS D +
Sbjct: 281 SGRLLLAGYDDFNCNIWDAMKGDR----AGVLAGHDNRVSCLGVTDDGMAVATGSWDSFL 336
Query: 299 RIW 301
+IW
Sbjct: 337 KIW 339
Score = 124 (48.7 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 41/170 (24%), Positives = 73/170 (42%)
Query: 194 SDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRS 253
+D + + S D K+ +W NK H++ +S + A + G+ + G D
Sbjct: 65 TDSRLLVSASQDGKLIIWDSYTTNKVHAI----PLRSSWVMTCAYAPSGNFVACGGLDNI 120
Query: 254 IIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD-LVCSGSADKTIRIWRGIDRNYTCLA 312
++ + +GN+ V L GHT + C + D + + S D T +W I+ +
Sbjct: 121 CSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDTTCALW-DIETGQQTVG 179
Query: 313 VLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQISFPLVR 362
GH G V L+ A D +++ SG+ D IK+W + + R
Sbjct: 180 -FAGHSGDVMSLSLAPDG-------RTFV--SGACDASIKLWDVRDSMCR 219
Score = 113 (44.8 bits), Expect = 0.00091, P = 0.00091
Identities = 48/217 (22%), Positives = 86/217 (39%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H +S D ++ S S D T +W + H + +++L+ DG +
Sbjct: 142 HTGYLSCCRFLDDNQIITS-SGDTTCALWDIETGQQTVGFAG-HSGDVMSLSLAPDGRTF 199
Query: 201 -TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEK 259
+G+ D IK+W + + + H S INA+A +G +G+ D + +++
Sbjct: 200 VSGACDASIKLWDVRDSMCRQTFIG----HESDINAVAFFPNGYAFTTGSDDATCRLFDL 255
Query: 260 EEDDGNILVV--GALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGH 317
D ++ + G T + + L+ +G D IW + + VL GH
Sbjct: 256 RADQELLMYSHDNIICGITS--VAFSRSGRLLLAGYDDFNCNIWDAMKGDRA--GVLAGH 311
Query: 318 RGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVW 354
V CL +D V +GS D +K+W
Sbjct: 312 DNRVSCLGV---------TDDGMAVATGSWDSFLKIW 339
>RGD|69319 [details] [associations]
symbol:Gnb2 "guanine nucleotide binding protein (G protein), beta
polypeptide 2" species:10116 "Rattus norvegicus" [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005246 "calcium channel
regulator activity" evidence=IMP] [GO:0043234 "protein complex"
evidence=IDA] [GO:0044297 "cell body" evidence=IDA] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO;ISS] [GO:0051020
"GTPase binding" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:69319
GO:GO:0048471 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 GO:GO:0044297 GO:GO:0005246
PRINTS:PR00319 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 CTD:2783 KO:K04537 OMA:WDIETSQ EMBL:U34959
EMBL:AF277892 EMBL:BC065579 IPI:IPI00212658 RefSeq:NP_112299.1
UniGene:Rn.1155 ProteinModelPortal:P54313 SMR:P54313 STRING:P54313
PhosphoSite:P54313 World-2DPAGE:0004:P54313 PRIDE:P54313
Ensembl:ENSRNOT00000001911 GeneID:81667 KEGG:rno:81667
UCSC:RGD:69319 InParanoid:P54313 NextBio:615252 ArrayExpress:P54313
Genevestigator:P54313 GermOnline:ENSRNOG00000001409 Uniprot:P54313
Length = 340
Score = 167 (63.8 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 73/303 (24%), Positives = 128/303 (42%)
Query: 14 TLKGHNS--YVSSLALAGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAV 71
TL+GH + Y + L + S D ++ WD T ++++ L ++ ++
Sbjct: 50 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYT-TNKVHAIPLRSSWVMTCAYAPS 108
Query: 72 KSLVVLA--DKLFSAHQDHKIRVW--KINNQEPDHQKYTRLATLPTLGDRAIKLLMPKNH 127
+ V D + S + K R +++ + P H Y L+ L D I
Sbjct: 109 GNFVACGGLDNICSIYS-LKTREGNVRVSRELPGHTGY--LSCCRFLDDNQIITSSGDTT 165
Query: 128 VQI----RRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA 183
+ +T + H V +L+L D S + D +IK+W D C ++
Sbjct: 166 CALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIG- 224
Query: 184 HDDAINAVALSDDGDVYT-GSADKKIKVW--RRSPGNKKHSLVDVLERHNSGINALALSC 240
H+ INAVA +G +T GS D +++ R +S +++ GI ++A S
Sbjct: 225 HESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNII----CGITSVAFSR 280
Query: 241 DGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTI 298
G +L +G D + +W+ + D G L GH + C+ V D V +GS D +
Sbjct: 281 SGRLLLAGYDDFNCNIWDAMKGDR----AGVLAGHDNRVSCLGVTDDGMAVATGSWDSFL 336
Query: 299 RIW 301
+IW
Sbjct: 337 KIW 339
Score = 124 (48.7 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 41/170 (24%), Positives = 73/170 (42%)
Query: 194 SDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRS 253
+D + + S D K+ +W NK H++ +S + A + G+ + G D
Sbjct: 65 TDSRLLVSASQDGKLIIWDSYTTNKVHAI----PLRSSWVMTCAYAPSGNFVACGGLDNI 120
Query: 254 IIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD-LVCSGSADKTIRIWRGIDRNYTCLA 312
++ + +GN+ V L GHT + C + D + + S D T +W I+ +
Sbjct: 121 CSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDTTCALW-DIETGQQTVG 179
Query: 313 VLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQISFPLVR 362
GH G V L+ A D +++ SG+ D IK+W + + R
Sbjct: 180 -FAGHSGDVMSLSLAPDG-------RTFV--SGACDASIKLWDVRDSMCR 219
Score = 113 (44.8 bits), Expect = 0.00091, P = 0.00091
Identities = 48/217 (22%), Positives = 86/217 (39%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H +S D ++ S S D T +W + H + +++L+ DG +
Sbjct: 142 HTGYLSCCRFLDDNQIITS-SGDTTCALWDIETGQQTVGFAG-HSGDVMSLSLAPDGRTF 199
Query: 201 -TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEK 259
+G+ D IK+W + + + H S INA+A +G +G+ D + +++
Sbjct: 200 VSGACDASIKLWDVRDSMCRQTFIG----HESDINAVAFFPNGYAFTTGSDDATCRLFDL 255
Query: 260 EEDDGNILVV--GALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGH 317
D ++ + G T + + L+ +G D IW + + VL GH
Sbjct: 256 RADQELLMYSHDNIICGITS--VAFSRSGRLLLAGYDDFNCNIWDAMKGDRA--GVLAGH 311
Query: 318 RGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVW 354
V CL +D V +GS D +K+W
Sbjct: 312 DNRVSCLGV---------TDDGMAVATGSWDSFLKIW 339
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 170 (64.9 bits), Expect = 6.9e-10, P = 6.9e-10
Identities = 67/302 (22%), Positives = 139/302 (46%)
Query: 16 KGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAVKS 73
KGH + ++SL L+ GK L T S D + W+ + ++ + ++V +V+
Sbjct: 15 KGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAY--RYVGHKDVVT----SVQ- 67
Query: 74 LVVLADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATLP------TLGDRAIKLLMPKNH 127
+ L SA +D +R+W I ++ ++ + T P + + +
Sbjct: 68 FSPHGNLLASASRDRTVRLW-IPDKRGKFSEF-KAHTAPVRSVDFSADGQFLATASEDKS 125
Query: 128 VQI----RRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA 183
+++ R+ + H V + D L+ S S D+TIKIW T++ +C+ + +++
Sbjct: 126 IKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDS 185
Query: 184 HDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDG 242
A N V + G + + +D+ +KVW + + L+ + H+ G+N ++ G
Sbjct: 186 VGFA-NFVDFNPSGTCIASAGSDQTVKVW----DVRVNKLLQHYQVHSGGVNCISFHPSG 240
Query: 243 SVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVS--DLVCSGSADKTIRI 300
+ L + + D ++ + + E G ++ L+GHT + ++ +L SG AD + +
Sbjct: 241 NYLITASSDGTLKILDLLE--GRLIYT--LQGHTGPVFTVSFSKGGELFASGGADTQVLL 296
Query: 301 WR 302
WR
Sbjct: 297 WR 298
Score = 135 (52.6 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 60/261 (22%), Positives = 103/261 (39%)
Query: 17 GHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKGAVKSL 74
GH V+S+ + G L + S D VR W + EF ++ V+S+
Sbjct: 58 GHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKF--SEFKAHT-------APVRSV 108
Query: 75 VVLADKLF--SAHQDHKIRVWKINNQE-----PDHQKYTRLATLPTLGDRAIKLLMPKNH 127
AD F +A +D I+VW + Q H + R A G R I
Sbjct: 109 DFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDG-RLIVSCSEDKT 167
Query: 128 VQI--RRHKTCT--WVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA 183
++I +K C + V + + T + S D+T+K+W K L+
Sbjct: 168 IKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHY-QV 226
Query: 184 HDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDG 242
H +N ++ G+ + T S+D +K+ G L+ L+ H + ++ S G
Sbjct: 227 HSGGVNCISFHPSGNYLITASSDGTLKILDLLEGR----LIYTLQGHTGPVFTVSFSKGG 282
Query: 243 SVLYSGACDRSIIVWEKEEDD 263
+ SG D +++W D+
Sbjct: 283 ELFASGGADTQVLLWRTNFDE 303
>UNIPROTKB|Q99973 [details] [associations]
symbol:TEP1 "Telomerase protein component 1" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0000781
"chromosome, telomeric region" evidence=IEA] [GO:0003723 "RNA
binding" evidence=ISS] [GO:0000722 "telomere maintenance via
recombination" evidence=IDA] [GO:0003720 "telomerase activity"
evidence=IDA] [GO:0005697 "telomerase holoenzyme complex"
evidence=IDA] [GO:0030529 "ribonucleoprotein complex" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0016363 "nuclear matrix"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR008858 InterPro:IPR015943 Pfam:PF00400 Pfam:PF05731
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50988 SMART:SM00320
GO:GO:0005524 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0003723
GO:GO:0016363 GO:GO:0000781 GO:GO:0000722 InterPro:IPR007111
PROSITE:PS50837 GO:GO:0005697 CleanEx:HS_TEP1 EMBL:U86136
EMBL:BC126107 EMBL:BX640983 IPI:IPI00294519 IPI:IPI00413874
RefSeq:NP_009041.2 UniGene:Hs.508835 ProteinModelPortal:Q99973
SMR:Q99973 IntAct:Q99973 STRING:Q99973 PhosphoSite:Q99973
DMDM:215273899 PaxDb:Q99973 PRIDE:Q99973 Ensembl:ENST00000262715
GeneID:7011 KEGG:hsa:7011 UCSC:uc001vxe.3 CTD:7011
GeneCards:GC14M020833 H-InvDB:HIX0026646 HGNC:HGNC:11726
HPA:HPA029206 MIM:601686 neXtProt:NX_Q99973 PharmGKB:PA36443
HOGENOM:HOG000154545 HOVERGEN:HBG059633 InParanoid:Q99973 KO:K11127
OMA:SVPDAWK OrthoDB:EOG4001HG PhylomeDB:Q99973 ChiTaRS:TEP1
GenomeRNAi:7011 NextBio:27388 ArrayExpress:Q99973 Bgee:Q99973
Genevestigator:Q99973 GermOnline:ENSG00000129566 InterPro:IPR025139
InterPro:IPR008850 Pfam:PF13271 Pfam:PF05386 PROSITE:PS51226
Uniprot:Q99973
Length = 2627
Score = 189 (71.6 bits), Expect = 6.9e-10, Sum P(2) = 6.9e-10
Identities = 87/364 (23%), Positives = 152/364 (41%)
Query: 12 LTTLKGHNSYVSS-LAL-AGKFLYTGSSDNEVRSWDCNTFSSELDQEFLSNNNIVAVGKG 69
L H+ +V++ L L AG L T D +V+ W S L + + +++
Sbjct: 1877 LAAFPAHHGFVAAALFLHAGCQLLTAGEDGKVQVW-----SGSLGRP-RGHLGSLSLSPA 1930
Query: 70 AVKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLGDRAIKLLMP---KN 126
+L D++ ++ IR++KI++ Q + L + K+L+
Sbjct: 1931 LSVALSPDGDRVAVGYRADGIRIYKISSGSQGAQGQALDVAVSALAWLSPKVLVSGAEDG 1990
Query: 127 HVQIRRHKTCT----WVHHVDAVSALALTKDETLLYSVSWDRTIKIW---------RTSD 173
+Q K C+ W+ L L + LL S S D T+++W + D
Sbjct: 1991 SLQGWALKECSLQSLWLLSRFQKPVLGLATSQELLASASEDFTVQLWPRQLLTRPHKAED 2050
Query: 174 FKCLESITNAHDDAINAVALSDDG-DVYTGSADKKIKVWR-RSPGNKKHSLVDVLER-HN 230
F C + H+ ++ + S DG + TG D+ + W R+P K L+ H
Sbjct: 2051 FPCGTEL-RGHEGPVSCCSFSTDGGSLATGGRDRSLLCWDVRTP--KTPVLIHSFPACHR 2107
Query: 231 SGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVC 290
+ A + D ++L S + D S+ +W+ E G L G GH ++ +A V + V
Sbjct: 2108 DWVTGCAWTKD-NLLISCSSDGSVGLWDPES--GQRL--GQFLGHQSAVSAVAAVEEHVV 2162
Query: 291 SGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCD 350
S S D T+++W D L + H GP+ AAA++ + LV + LD
Sbjct: 2163 SVSRDGTLKVW---DHQGVELTSIPAHSGPISHCAAAMEPRAAGQPGSELLVVTVGLDGA 2219
Query: 351 IKVW 354
++W
Sbjct: 2220 TRLW 2223
Score = 38 (18.4 bits), Expect = 6.9e-10, Sum P(2) = 6.9e-10
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 341 LVCSGSLDCDIKVWQ 355
L+ + S D D+K+W+
Sbjct: 2567 LLVTASKDRDVKLWE 2581
>DICTYBASE|DDB_G0279801 [details] [associations]
symbol:pex7 "peroxisomal biogenesis factor 7"
species:44689 "Dictyostelium discoideum" [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA;ISS] [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=IEA;ISS] [GO:0007031
"peroxisome organization" evidence=ISS] [GO:0015031 "protein
transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0279801 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007031 GO:GO:0016558 EMBL:AAFI02000033
HSSP:P46680 KO:K13341 OMA:GHEYAVR GO:GO:0005053 RefSeq:XP_641489.1
ProteinModelPortal:Q54WA3 STRING:Q54WA3 EnsemblProtists:DDB0233068
GeneID:8622229 KEGG:ddi:DDB_G0279801 InParanoid:Q54WA3
ProtClustDB:CLSZ2729075 PANTHER:PTHR22850:SF4 Uniprot:Q54WA3
Length = 316
Score = 166 (63.5 bits), Expect = 7.0e-10, P = 7.0e-10
Identities = 69/271 (25%), Positives = 123/271 (45%)
Query: 44 WDCNTFSSELDQEFLSNNNIVAVGKGAVKSLVVLAD---KLFSAHQDHKIRVWKINNQEP 100
+DC T+S E + S++ G G++K A + + ++H V+ +
Sbjct: 62 YDC-TWSEENECHVASSS-----GDGSIKIWDTQAPSGGRPIKSFEEHTKEVYSV----- 110
Query: 101 DHQKYTRLATLPTLGDRAIKLLMPKNHVQI---RRHKTCTWVHHVDAVSALALTKDETLL 157
D T+ + D++IK+ P+ + R H+ C + SA+ ++ L
Sbjct: 111 DWNLVTKDTFITGSWDQSIKIWNPRMDRSLKTFREHRYCIY-------SAIWSPRNAHLF 163
Query: 158 YSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALS--DDGDVYTGSADKKIKVWR-RS 214
SVS DRT+KIW + D + L +I AHD I + +D +V TGS DK I++W R
Sbjct: 164 ASVSGDRTLKIWDSRDNRSLNTI-KAHDHEILTCDWNKYNDKEVVTGSVDKTIRIWDIRY 222
Query: 215 PGNKKHSLVDVLERHNSGINALALSCDG-SVLYSGACDRSIIVWEKEEDDGNILVVGALR 273
P +L H + + S S+L S + D S+IVW++ + I + +
Sbjct: 223 PDRP----TTILRGHTYAVRRIKCSPHSESMLASCSYDMSVIVWDRAREQDPI--IARMD 276
Query: 274 GHTKSILCM---AVVSDLVCSGSADKTIRIW 301
HT+ ++ + + + S S D+ + +W
Sbjct: 277 HHTEFVVGLDWNMFIDGQMASCSWDEQVCVW 307
Score = 114 (45.2 bits), Expect = 0.00061, P = 0.00061
Identities = 42/177 (23%), Positives = 82/177 (46%)
Query: 150 LTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVYTG-SADKKI 208
+TKD T + SWD++IKIW + L++ +A+ + ++ S D+ +
Sbjct: 115 VTKD-TFITG-SWDQSIKIWNPRMDRSLKTFREHRYCIYSAIWSPRNAHLFASVSGDRTL 172
Query: 209 KVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSV-----LYSGACDRSIIVWEKEEDD 263
K+W S N+ ++ ++ H+ I L+CD + + +G+ D++I +W+ D
Sbjct: 173 KIWD-SRDNRS---LNTIKAHDHEI----LTCDWNKYNDKEVVTGSVDKTIRIWDIRYPD 224
Query: 264 GNILVVGALRGHT---KSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLAVLEGH 317
+ LRGHT + I C ++ S S D ++ +W +A ++ H
Sbjct: 225 RPTTI---LRGHTYAVRRIKCSPHSESMLASCSYDMSVIVWDRAREQDPIIARMDHH 278
>GENEDB_PFALCIPARUM|PF08_0019 [details] [associations]
symbol:PF08_0019 "receptor for activated C
kinase homolog, PfRACK" species:5833 "Plasmodium falciparum"
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 166 (63.5 bits), Expect = 7.5e-10, P = 7.5e-10
Identities = 66/227 (29%), Positives = 106/227 (46%)
Query: 137 TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA-HDDAINAVALSD 195
+++ H V +++ + D + S S D+TIK+W T +C +IT+ H D I V S
Sbjct: 109 SFIGHTSDVFSVSFSPDNRQIVSASRDKTIKLWNTLA-QCKYTITDQQHTDWITCVRFSP 167
Query: 196 DGD---VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDR 252
+ + + DK +KVW K L LE H +N + +S DGS+ SG D
Sbjct: 168 SPNQAIIVSCGWDKLVKVWNL----KNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDG 223
Query: 253 SIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLA 312
+W+ +E G L G T + LC + +C+ + D+ IRIW ++ L
Sbjct: 224 VAKLWDVKE--GKHLY-SLETGSTINSLCFSPCDYWLCAAT-DRFIRIWN-LESK---LI 275
Query: 313 VLEGHRGPVKCLAAAIDNDRCDS---SDTSYLVCSGSLDCDIKVWQI 356
+ E + PVK + I C S S L+ GS D +I V+++
Sbjct: 276 ISEIY--PVK--QSKIGVPWCTSLTWSANGQLLYCGSTDGNIYVYEV 318
Score = 147 (56.8 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 56/227 (24%), Positives = 103/227 (45%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDG-DV 199
H A++ ++++ D S SWD ++++W S + + S H + +V+ S D +
Sbjct: 71 HSQAINDVSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIG-HTSDVFSVSFSPDNRQI 129
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSC--DGSVLYSGACDRSIIVW 257
+ S DK IK+W + K+++ D ++H I + S + +++ S D+ + VW
Sbjct: 130 VSASRDKTIKLWN-TLAQCKYTITD--QQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVW 186
Query: 258 EKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIWRGIDRNYTCLAVLE 315
+ D N L GHT + + + D L SG D ++W D V E
Sbjct: 187 NLKNCDLN----KNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLW---D-------VKE 232
Query: 316 G-HRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQISFPLV 361
G H ++ + I N C S Y +C+ + D I++W + L+
Sbjct: 233 GKHLYSLET-GSTI-NSLC-FSPCDYWLCAAT-DRFIRIWNLESKLI 275
Score = 135 (52.6 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 45/186 (24%), Positives = 80/186 (43%)
Query: 180 ITNAHDDAINAVALSDDGDVYT---GSADKKIKVWRRSPGNKKHSLVDV---LERHNSGI 233
+ H D + +V+ D + T S DKK+ VW + + + L H+ I
Sbjct: 16 LEGGHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAI 75
Query: 234 NALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCS 291
N +++S DG SG+ D S+ +W+ + + + GHT + ++ D + S
Sbjct: 76 NDVSISSDGLFALSGSWDHSVRLWDLSLGE----TIRSFIGHTSDVFSVSFSPDNRQIVS 131
Query: 292 GSADKTIRIWRGIDR-NYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCD 350
S DKTI++W + + YT + H + C+ R S ++ S D
Sbjct: 132 ASRDKTIKLWNTLAQCKYTITD--QQHTDWITCV-------RFSPSPNQAIIVSCGWDKL 182
Query: 351 IKVWQI 356
+KVW +
Sbjct: 183 VKVWNL 188
Score = 122 (48.0 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 56/262 (21%), Positives = 112/262 (42%)
Query: 14 TLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSELDQEFLSN-NNIVAVGKGA 70
+L GH+ ++ ++++ G F +GS D+ VR WD + E + F+ + +++ +V
Sbjct: 67 SLTGHSQAINDVSISSDGLFALSGSWDHSVRLWDLSL--GETIRSFIGHTSDVFSVSFSP 124
Query: 71 VKSLVVLADKLFSAHQDHKIRVW------KINNQEPDHQKYTRLATLPTLGDRAIKLLMP 124
+V SA +D I++W K + H + ++AI +
Sbjct: 125 DNRQIV------SASRDKTIKLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCG 178
Query: 125 KNH-VQIRRHKTC----TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLES 179
+ V++ K C H ++ + ++ D +L S D K+W + K L S
Sbjct: 179 WDKLVKVWNLKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYS 238
Query: 180 ITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGI---NAL 236
+ IN++ S + D+ I++W S + +++ G+ +L
Sbjct: 239 LETG--STINSLCFSPCDYWLCAATDRFIRIWNLE-SKLIISEIYPVKQSKIGVPWCTSL 295
Query: 237 ALSCDGSVLYSGACDRSIIVWE 258
S +G +LY G+ D +I V+E
Sbjct: 296 TWSANGQLLYCGSTDGNIYVYE 317
>UNIPROTKB|Q8IBA0 [details] [associations]
symbol:PfRACK "Receptor for activated C kinase homolog,
PfRACK" species:36329 "Plasmodium falciparum 3D7" [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 166 (63.5 bits), Expect = 7.5e-10, P = 7.5e-10
Identities = 66/227 (29%), Positives = 106/227 (46%)
Query: 137 TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNA-HDDAINAVALSD 195
+++ H V +++ + D + S S D+TIK+W T +C +IT+ H D I V S
Sbjct: 109 SFIGHTSDVFSVSFSPDNRQIVSASRDKTIKLWNTLA-QCKYTITDQQHTDWITCVRFSP 167
Query: 196 DGD---VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDR 252
+ + + DK +KVW K L LE H +N + +S DGS+ SG D
Sbjct: 168 SPNQAIIVSCGWDKLVKVWNL----KNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDG 223
Query: 253 SIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGIDRNYTCLA 312
+W+ +E G L G T + LC + +C+ + D+ IRIW ++ L
Sbjct: 224 VAKLWDVKE--GKHLY-SLETGSTINSLCFSPCDYWLCAAT-DRFIRIWN-LESK---LI 275
Query: 313 VLEGHRGPVKCLAAAIDNDRCDS---SDTSYLVCSGSLDCDIKVWQI 356
+ E + PVK + I C S S L+ GS D +I V+++
Sbjct: 276 ISEIY--PVK--QSKIGVPWCTSLTWSANGQLLYCGSTDGNIYVYEV 318
Score = 147 (56.8 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 56/227 (24%), Positives = 103/227 (45%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDG-DV 199
H A++ ++++ D S SWD ++++W S + + S H + +V+ S D +
Sbjct: 71 HSQAINDVSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIG-HTSDVFSVSFSPDNRQI 129
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSC--DGSVLYSGACDRSIIVW 257
+ S DK IK+W + K+++ D ++H I + S + +++ S D+ + VW
Sbjct: 130 VSASRDKTIKLWN-TLAQCKYTITD--QQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVW 186
Query: 258 EKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIWRGIDRNYTCLAVLE 315
+ D N L GHT + + + D L SG D ++W D V E
Sbjct: 187 NLKNCDLN----KNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLW---D-------VKE 232
Query: 316 G-HRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQISFPLV 361
G H ++ + I N C S Y +C+ + D I++W + L+
Sbjct: 233 GKHLYSLET-GSTI-NSLC-FSPCDYWLCAAT-DRFIRIWNLESKLI 275
Score = 135 (52.6 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 45/186 (24%), Positives = 80/186 (43%)
Query: 180 ITNAHDDAINAVALSDDGDVYT---GSADKKIKVWRRSPGNKKHSLVDV---LERHNSGI 233
+ H D + +V+ D + T S DKK+ VW + + + L H+ I
Sbjct: 16 LEGGHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAI 75
Query: 234 NALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCS 291
N +++S DG SG+ D S+ +W+ + + + GHT + ++ D + S
Sbjct: 76 NDVSISSDGLFALSGSWDHSVRLWDLSLGE----TIRSFIGHTSDVFSVSFSPDNRQIVS 131
Query: 292 GSADKTIRIWRGIDR-NYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCD 350
S DKTI++W + + YT + H + C+ R S ++ S D
Sbjct: 132 ASRDKTIKLWNTLAQCKYTITD--QQHTDWITCV-------RFSPSPNQAIIVSCGWDKL 182
Query: 351 IKVWQI 356
+KVW +
Sbjct: 183 VKVWNL 188
Score = 122 (48.0 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 56/262 (21%), Positives = 112/262 (42%)
Query: 14 TLKGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSELDQEFLSN-NNIVAVGKGA 70
+L GH+ ++ ++++ G F +GS D+ VR WD + E + F+ + +++ +V
Sbjct: 67 SLTGHSQAINDVSISSDGLFALSGSWDHSVRLWDLSL--GETIRSFIGHTSDVFSVSFSP 124
Query: 71 VKSLVVLADKLFSAHQDHKIRVW------KINNQEPDHQKYTRLATLPTLGDRAIKLLMP 124
+V SA +D I++W K + H + ++AI +
Sbjct: 125 DNRQIV------SASRDKTIKLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCG 178
Query: 125 KNH-VQIRRHKTC----TWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLES 179
+ V++ K C H ++ + ++ D +L S D K+W + K L S
Sbjct: 179 WDKLVKVWNLKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYS 238
Query: 180 ITNAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGI---NAL 236
+ IN++ S + D+ I++W S + +++ G+ +L
Sbjct: 239 LETG--STINSLCFSPCDYWLCAATDRFIRIWNLE-SKLIISEIYPVKQSKIGVPWCTSL 295
Query: 237 ALSCDGSVLYSGACDRSIIVWE 258
S +G +LY G+ D +I V+E
Sbjct: 296 TWSANGQLLYCGSTDGNIYVYE 317
>UNIPROTKB|O14727 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9606 "Homo sapiens" [GO:0006952 "defense response"
evidence=IEA] [GO:0043531 "ADP binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0051402 "neuron apoptotic process" evidence=IEA]
[GO:0001843 "neural tube closure" evidence=IEA] [GO:0006309
"apoptotic DNA fragmentation" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000166 "nucleotide binding" evidence=TAS]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=NAS] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=IDA;TAS] [GO:0042981
"regulation of apoptotic process" evidence=TAS] [GO:0043293
"apoptosome" evidence=IDA;TAS] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IDA] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006915
"apoptotic process" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] Reactome:REACT_578 InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 Pathway_Interaction_DB:p75ntrpathway GO:GO:0007399
GO:GO:0006952 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0000166 DrugBank:DB00171 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900 GO:GO:0051402
Pathway_Interaction_DB:caspase_pathway EMBL:CH471054 GO:GO:0043531
GO:GO:0001843 GO:GO:0097193 GO:GO:0006309 GO:GO:0008656
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OrthoDB:EOG43TZTP GO:GO:0043293 EMBL:AF013263 EMBL:AJ243003
EMBL:AJ243004 EMBL:AJ243005 EMBL:AJ243006 EMBL:AJ243007
EMBL:AJ243008 EMBL:AJ243009 EMBL:AJ243010 EMBL:AJ243011
EMBL:AJ243048 EMBL:AJ243107 EMBL:AF134397 EMBL:AF149794
EMBL:AB007873 EMBL:AB103079 EMBL:BC136531 EMBL:BC136532
EMBL:AJ133643 EMBL:AJ133644 EMBL:AJ133645 EMBL:AF248734
IPI:IPI00023630 IPI:IPI00217460 IPI:IPI00217461 IPI:IPI00217462
IPI:IPI00217463 IPI:IPI00375875 PIR:T03818 RefSeq:NP_001151.1
RefSeq:NP_037361.1 RefSeq:NP_863651.1 RefSeq:NP_863658.1
RefSeq:NP_863659.1 UniGene:Hs.552567 PDB:1C15 PDB:1CWW PDB:1CY5
PDB:1Z6T PDB:2P1H PDB:2YGS PDB:3IZA PDB:3YGS PDBsum:1C15
PDBsum:1CWW PDBsum:1CY5 PDBsum:1Z6T PDBsum:2P1H PDBsum:2YGS
PDBsum:3IZA PDBsum:3YGS ProteinModelPortal:O14727 SMR:O14727
DIP:DIP-27624N IntAct:O14727 MINT:MINT-96751 STRING:O14727
PhosphoSite:O14727 PaxDb:O14727 PRIDE:O14727
Ensembl:ENST00000333991 Ensembl:ENST00000357310
Ensembl:ENST00000359972 Ensembl:ENST00000547045
Ensembl:ENST00000550527 Ensembl:ENST00000551964
Ensembl:ENST00000552268 GeneID:317 KEGG:hsa:317 UCSC:uc001tfy.3
UCSC:uc001tfz.3 UCSC:uc001tga.3 UCSC:uc001tgb.3 UCSC:uc001tgc.3
CTD:317 GeneCards:GC12P099039 HGNC:HGNC:576 HPA:HPA031373
MIM:602233 neXtProt:NX_O14727 PharmGKB:PA24868 HOVERGEN:HBG018730
InParanoid:O14727 KO:K02084 OMA:KVCKNSA PhylomeDB:O14727
Pathway_Interaction_DB:hivnefpathway BindingDB:O14727
ChEMBL:CHEMBL1795093 EvolutionaryTrace:O14727 GenomeRNAi:317
NextBio:1287 PMAP-CutDB:O14727 ArrayExpress:O14727 Bgee:O14727
Genevestigator:O14727 GermOnline:ENSG00000120868 InterPro:IPR017251
PIRSF:PIRSF037646 Uniprot:O14727
Length = 1248
Score = 175 (66.7 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 86/357 (24%), Positives = 139/357 (38%)
Query: 16 KGHNSYVSSLALA--GKFLYTGSSDNEVRSWD----CNTFSSELDQEF---LSNNNIVAV 66
+GH S+V + + G T S D +R W+ C + L QE N ++ +
Sbjct: 879 RGHLSWVHGVMFSPDGSSFLTSSDDQTIRLWETKKVCKNSAVMLKQEVDVVFQENEVMVL 938
Query: 67 GKGAVKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATLPTLGDR--AIKLL-M 123
++ L ++ + + +V P H +Y GD AI++L +
Sbjct: 939 AVDHIRRLQLINGRTGQIDYLTEAQV-SCCCLSP-HLQYI------AFGDENGAIEILEL 990
Query: 124 PKNHV-QIR-RHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESIT 181
N + Q R +HK W H+ T DE L S S D I++W KC+
Sbjct: 991 VNNRIFQSRFQHKKTVW--HIQ------FTADEKTLISSSDDAEIQVWNWQLDKCI--FL 1040
Query: 182 NAHDDAINAVALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCD 241
H + + L + + + S D +KVW GNK+ V H + + +S D
Sbjct: 1041 RGHQETVKDFRLLKNSRLLSWSFDGTVKVWNIITGNKEKDFVC----HQGTVLSCDISHD 1096
Query: 242 GSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMA--VVSDLVCSGSADKTIR 299
+ S + D++ +W + +L + LRGH + C A V S L+ +G + IR
Sbjct: 1097 ATKFSSTSADKTAKIWSFDL----LLPLHELRGHNGCVRCSAFSVDSTLLATGDDNGEIR 1152
Query: 300 IWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQI 356
IW + L G D C S D L+ +G IK W +
Sbjct: 1153 IWNVSNGELLHLCAPLSEEGAAT--HGGWVTDLCFSPDGKMLISAGGY---IKWWNV 1204
Score = 158 (60.7 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 48/172 (27%), Positives = 80/172 (46%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALS-DDGDV 199
H DAV ++D + S D+T+++++ + L I AH+D + A S DD +
Sbjct: 614 HTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEI-KAHEDEVLCCAFSTDDRFI 672
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALAL--SCDGSVLYSGACDRSIIVW 257
T S DKK+K+W G LV + H+ +N S +L +G+ D + +W
Sbjct: 673 ATCSVDKKVKIWNSMTGE----LVHTYDEHSEQVNCCHFTNSSHHLLLATGSSDCFLKLW 728
Query: 258 EKEEDDGNILVVGALRGHTKSIL-CMAVVSD-LVCSGSADKTIRIWRGIDRN 307
+ + + + GHT S+ C D L+ S SAD T+++W N
Sbjct: 729 DLNQKECR----NTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDATSAN 776
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 166 (63.5 bits), Expect = 8.3e-10, P = 8.3e-10
Identities = 46/144 (31%), Positives = 71/144 (49%)
Query: 215 PGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRG 274
P K + + LE H + I+ + S DG++L S + D+++I+W N ++ G
Sbjct: 28 PIYKPYRHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSAT----NYSLIHRYEG 83
Query: 275 HTKSILCMAVVSD--LVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDR 332
H+ I +A SD CS S D T+RIW Y CL VL GH V C+
Sbjct: 84 HSSGISDLAWSSDSHYTCSASDDCTLRIWDARSP-YECLKVLRGHTNFVFCV-------- 134
Query: 333 CDSSDTSYLVCSGSLDCDIKVWQI 356
+ + S L+ SGS D I++W++
Sbjct: 135 -NFNPPSNLIVSGSFDETIRIWEV 157
Score = 159 (61.0 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 52/197 (26%), Positives = 90/197 (45%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H A+S + + D LL S S D+T+ +W +++ + H I+ +A S D Y
Sbjct: 42 HTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRY-EGHSSGISDLAWSSDSH-Y 99
Query: 201 TGSA--DKKIKVW-RRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVW 257
T SA D +++W RSP + + VL H + + + + +++ SG+ D +I +W
Sbjct: 100 TCSASDDCTLRIWDARSP----YECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIW 155
Query: 258 EKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIWRGIDRNYTCLAVLE 315
E + G V ++ H+ I + D L+ S S D + +IW + TCL L
Sbjct: 156 EVKT--GKC--VRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDA--KEGTCLKTLI 209
Query: 316 GHRGPVKCLAAAIDNDR 332
+ P A N +
Sbjct: 210 DDKSPAVSFAKFSPNGK 226
Score = 148 (57.2 bits), Expect = 9.8e-08, P = 9.8e-08
Identities = 55/221 (24%), Positives = 91/221 (41%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD-V 199
H + V + L+ S S+D TI+IW KC+ I AH I++V + DG +
Sbjct: 127 HTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMI-KAHSMPISSVHFNRDGSLI 185
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEK 259
+ S D K+W G +L+D ++ + ++ S +G + D ++ +
Sbjct: 186 VSASHDGSCKIWDAKEGTCLKTLID--DK-SPAVSFAKFSPNGKFILVATLDSTLKL--S 240
Query: 260 EEDDGNILVVGALRGHTKSILCMAVVSDL-----VCSGSADKTIRIWRGIDRNYTCLAVL 314
G L V GHT + C+ + + SGS D + +W RN L L
Sbjct: 241 NYATGKFLKV--YTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNI--LQRL 296
Query: 315 EGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQ 355
EGH V ++ + SS LD I++W+
Sbjct: 297 EGHTDAVISVSCHPVQNEISSS-------GNHLDKTIRIWK 330
Score = 121 (47.7 bits), Expect = 0.00011, P = 0.00011
Identities = 32/90 (35%), Positives = 45/90 (50%)
Query: 272 LRGHTKSILCMAVVSD--LVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAID 329
L GHT +I C+ +D L+ S S DKT+ +W NY+ + EGH + LA
Sbjct: 39 LEGHTAAISCVKFSNDGNLLASASVDKTMILWSAT--NYSLIHRYEGHSSGISDLAW--- 93
Query: 330 NDRCDSSDTSYLVCSGSLDCDIKVWQISFP 359
SSD+ Y CS S DC +++W P
Sbjct: 94 -----SSDSHY-TCSASDDCTLRIWDARSP 117
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 168 (64.2 bits), Expect = 8.5e-10, P = 8.5e-10
Identities = 56/219 (25%), Positives = 98/219 (44%)
Query: 155 TLLYSVSWDRTIKIW--RTSDFKCLESITNAHDDAINAVALSDDGDVYTG-SADKKIKVW 211
+++ S S D TIK+W T DF E H D++ ++ G + SAD IK+W
Sbjct: 121 SVIVSASEDATIKVWDHETGDF---ERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLW 177
Query: 212 RRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGA 271
+ + + H+ ++++A+ +G + S + D++I +WE V
Sbjct: 178 ----DFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATG----YCVKT 229
Query: 272 LRGHTKSILCMAVVSD--LVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAID 329
GH + + + D L+ S S D+T+R+W + C A L H V+C++ A +
Sbjct: 230 FTGHREWVRMVRPNQDGTLIASSSNDQTVRVW--VVATKECKAELREHEHVVECISWAPE 287
Query: 330 NDR-----CDSSDTSY------LVCSGSLDCDIKVWQIS 357
+ S+T + SGS D IK+W +S
Sbjct: 288 SAHPTILEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 326
Score = 160 (61.4 bits), Expect = 6.9e-09, P = 6.9e-09
Identities = 53/197 (26%), Positives = 90/197 (45%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD-V 199
H D+V ++ LL S S D TIK+W F+C+ ++ + HD +++VA+ +GD +
Sbjct: 149 HTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTM-HGHDHNVSSVAIMPNGDHI 207
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVW-- 257
+ S DK IK+W + G V H + + + DG+++ S + D+++ VW
Sbjct: 208 VSASRDKTIKMWEVATGY----CVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVV 263
Query: 258 -------EKEEDDGNILVVGALRGHTKSILCMAVVSD---------LVCSGSADKTIRIW 301
E E + + + + A S+ + SGS DKTI++W
Sbjct: 264 ATKECKAELREHEHVVECISWAPESAHPTILEATGSETKKSGKPGPFLLSGSRDKTIKMW 323
Query: 302 RGIDRNY-TCLAVLEGH 317
D + CL L GH
Sbjct: 324 ---DVSIGMCLMTLVGH 337
Score = 138 (53.6 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 60/234 (25%), Positives = 103/234 (44%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGDVY 200
H VS++A+ + + S S D+TIK+W + C+++ T H + + V + DG +
Sbjct: 191 HDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTG-HREWVRMVRPNQDGTLI 249
Query: 201 TGSA-DKKIKVW----RRSPGN-KKHS-LVDVLERHNSGINALALSCDGS---------- 243
S+ D+ ++VW + ++H +V+ + + L GS
Sbjct: 250 ASSSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTILEATGSETKKSGKPGP 309
Query: 244 VLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVV--SDLVCSGSADKTIRIW 301
L SG+ D++I +W+ G L+ L GH + + V + S + DKT+RIW
Sbjct: 310 FLLSGSRDKTIKMWDVSI--GMCLMT--LVGHDNWVRGVLVHPGGKYIVSCADDKTLRIW 365
Query: 302 RGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQ 355
+N C L H V L D T+ V +GS+D +KVW+
Sbjct: 366 DY--KNKRCTKTLSAHEHFVTSL---------DFHKTAPYVVTGSVDQTVKVWE 408
>UNIPROTKB|F1MRM3 [details] [associations]
symbol:RRP9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00550000075093
OMA:AAKDCTI EMBL:DAAA02054389 IPI:IPI00867384 UniGene:Bt.9939
ProteinModelPortal:F1MRM3 Ensembl:ENSBTAT00000000891 Uniprot:F1MRM3
Length = 475
Score = 169 (64.5 bits), Expect = 8.8e-10, P = 8.8e-10
Identities = 71/251 (28%), Positives = 118/251 (47%)
Query: 70 AVKSLVVLADKLFSAHQDHKI-RVWK-INNQEPDHQKYTRLATLPT------LGDRAIKL 121
A K ++ + S + H I R K Q P H + + + GDR+ KL
Sbjct: 164 AAKDCTIIKWSVESGRKLHVIPRAKKGTEGQPPGHSTHVLCMAISSDGKYLASGDRS-KL 222
Query: 122 LMPKNHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESIT 181
++ Q +H T+ H DAVS LA + LYS S DR++K+W ++ +E++
Sbjct: 223 ILIWE-AQSCQH-LYTFTGHRDAVSGLAFRRGTHQLYSTSHDRSVKVWNVAENSYVETLF 280
Query: 182 NAHDDAINAV-ALSDDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSC 240
H DA+ A+ ALS + V G D ++VW+ P ++ LV H I+++ L
Sbjct: 281 G-HQDAVAALDALSRECCVTAGGRDGTVRVWK-IP--EESQLV--FYGHQGSIDSIQLIN 334
Query: 241 DGSVLYSGACDRSIIVWEKEEDDGNILVVGA--LRGHTK-------SILCMAVVSDLVCS 291
+ ++ SGA D S+ +W + L A LRG S + + +DLV +
Sbjct: 335 EEHMV-SGADDGSVALWGLSKKRPLALQREAHGLRGEPGLEQPFWVSSVAALLNTDLVAT 393
Query: 292 GSADKTIRIWR 302
GS + ++R+W+
Sbjct: 394 GSHNNSVRLWQ 404
Score = 140 (54.3 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 60/228 (26%), Positives = 105/228 (46%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALS-DDGDV 199
H V +A++ D L S + I IW + L + T H DA++ +A +
Sbjct: 198 HSTHVLCMAISSDGKYLASGDRSKLILIWEAQSCQHLYTFTG-HRDAVSGLAFRRGTHQL 256
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINAL-ALSCDGSVLYSGACDRSIIVWE 258
Y+ S D+ +KVW + ++S V+ L H + AL ALS + V +G D ++ VW+
Sbjct: 257 YSTSHDRSVKVWNVA----ENSYVETLFGHQDAVAALDALSRECCVT-AGGRDGTVRVWK 311
Query: 259 KEEDDGNILVVGALRGHTKSILCMAVVSDL-VCSGSADKTIRIWRGIDRNYTCLAVLEGH 317
E+ + GH SI + ++++ + SG+ D ++ +W G+ + E H
Sbjct: 312 IPEESQLVFY-----GHQGSIDSIQLINEEHMVSGADDGSVALW-GLSKKRPLALQREAH 365
Query: 318 --RG-P-------VKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQ 355
RG P V +AA ++ D LV +GS + +++WQ
Sbjct: 366 GLRGEPGLEQPFWVSSVAALLNTD---------LVATGSHNNSVRLWQ 404
Score = 117 (46.2 bits), Expect = 0.00057, P = 0.00057
Identities = 43/187 (22%), Positives = 83/187 (44%)
Query: 180 ITNAHDDAINAVALS-DDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLER-------HNS 231
I H +I + ++ DD +++ + D I W G K H + + H++
Sbjct: 141 ILRGHQLSITCLVVTPDDLAIFSAAKDCTIIKWSVESGRKLHVIPRAKKGTEGQPPGHST 200
Query: 232 GINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVV--SDLV 289
+ +A+S DG L SG + I++WE + + GH ++ +A + +
Sbjct: 201 HVLCMAISSDGKYLASGDRSKLILIWEAQSCQH----LYTFTGHRDAVSGLAFRRGTHQL 256
Query: 290 CSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDC 349
S S D+++++W + +Y + L GH+ V L A + + C V +G D
Sbjct: 257 YSTSHDRSVKVWNVAENSY--VETLFGHQDAVAALDA-LSRECC--------VTAGGRDG 305
Query: 350 DIKVWQI 356
++VW+I
Sbjct: 306 TVRVWKI 312
>FB|FBgn0025724 [details] [associations]
symbol:beta'Cop "beta'-coatomer protein" species:7227
"Drosophila melanogaster" [GO:0006890 "retrograde vesicle-mediated
transport, Golgi to ER" evidence=NAS] [GO:0030126 "COPI vesicle
coat" evidence=NAS] [GO:0048194 "Golgi vesicle budding"
evidence=NAS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=NAS] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0010883
"regulation of lipid storage" evidence=IDA] [GO:0005795 "Golgi
stack" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006888 GO:GO:0030126 GO:GO:0010883 GO:GO:0006890
InterPro:IPR011044 SUPFAM:SSF50969 InterPro:IPR016453
PIRSF:PIRSF005567 GeneTree:ENSGT00640000091529 OMA:LRNKAFG
EMBL:AJ006523 EMBL:AJ006524 EMBL:BT023906 EMBL:AY119527
RefSeq:NP_524836.2 UniGene:Dm.2980 ProteinModelPortal:O62621
SMR:O62621 DIP:DIP-22262N MINT:MINT-1636818 STRING:O62621
PaxDb:O62621 PRIDE:O62621 EnsemblMetazoa:FBtr0080469 GeneID:45757
KEGG:dme:Dmel_CG6699 CTD:45757 FlyBase:FBgn0025724
InParanoid:O62621 OrthoDB:EOG4VHHN9 PhylomeDB:O62621
ChiTaRS:beta'Cop GenomeRNAi:45757 NextBio:838315 Bgee:O62621
GermOnline:CG6699 Uniprot:O62621
Length = 914
Score = 173 (66.0 bits), Expect = 8.9e-10, P = 8.9e-10
Identities = 57/204 (27%), Positives = 92/204 (45%)
Query: 121 LLMPKNHVQIR--RHKTCTWVH----HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDF 174
+L + +QIR + T VH H D + +A+ + L+ + S D IK+W
Sbjct: 72 ILTGSDDMQIRVFNYNTLEKVHSFEAHSDYLRCIAVHPTQPLVLTSSDDMLIKLWNWEKM 131
Query: 175 KCLESITNAHDDAINAVALS--DDGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSG 232
+ + H + + + D+ + S D+ +KVW+ G+ + LE H G
Sbjct: 132 WACQRVFEGHTHYVMQIVFNPKDNNTFASASLDRTVKVWQL--GSNFANFT--LEGHEKG 187
Query: 233 INALALSCDGSVLY--SGACDRSIIVWEKEEDDGNILVVGALRGHTKSI--LCMAVVSDL 288
+N + G Y SGA DR + +W+ + N V L GH ++I +C +
Sbjct: 188 VNCVDYYHGGDKPYLISGADDRLVKIWDYQ----NKTCVQTLEGHAQNISAVCFHPELPI 243
Query: 289 VCSGSADKTIRIWR-GIDRNYTCL 311
V +GS D T+RIW G R TCL
Sbjct: 244 VLTGSEDGTVRIWHSGTYRLETCL 267
Score = 138 (53.6 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 55/242 (22%), Positives = 102/242 (42%)
Query: 119 IKLLMPKNHVQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLE 178
+ ++ +N ++ + C V SA + + +L S D I+++ + + +
Sbjct: 39 VHIMNYENQQMVKDFEVCD----VPVRSARFVARKNWILTG-SDDMQIRVFNYNTLEKVH 93
Query: 179 SITNAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALA 237
S AH D + +A+ V T S D IK+W K + V E H + +
Sbjct: 94 SF-EAHSDYLRCIAVHPTQPLVLTSSDDMLIKLWN---WEKMWACQRVFEGHTHYVMQIV 149
Query: 238 LSC-DGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVV----SDLVCSG 292
+ D + S + DR++ VW+ + N L GH K + C+ + SG
Sbjct: 150 FNPKDNNTFASASLDRTVKVWQLGSNFANF----TLEGHEKGVNCVDYYHGGDKPYLISG 205
Query: 293 SADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIK 352
+ D+ ++IW +N TC+ LEGH + + C + +V +GS D ++
Sbjct: 206 ADDRLVKIWDY--QNKTCVQTLEGHAQNISAV--------CFHPELP-IVLTGSEDGTVR 254
Query: 353 VW 354
+W
Sbjct: 255 IW 256
Score = 119 (46.9 bits), Expect = 0.00082, P = 0.00082
Identities = 54/207 (26%), Positives = 88/207 (42%)
Query: 71 VKSLVVLADK--LFSAHQDHKIRVWKINNQEP-----DHQKYTR-LATLPTL-------G 115
V+S +A K + + D +IRV+ N E H Y R +A PT
Sbjct: 60 VRSARFVARKNWILTGSDDMQIRVFNYNTLEKVHSFEAHSDYLRCIAVHPTQPLVLTSSD 119
Query: 116 DRAIKLLMPKNHVQIRRHKTCTWVHHVDAVSALALT-KDETLLYSVSWDRTIKIWRT-SD 173
D IKL + +R + H V + KD S S DRT+K+W+ S+
Sbjct: 120 DMLIKLWNWEKMWACQR----VFEGHTHYVMQIVFNPKDNNTFASASLDRTVKVWQLGSN 175
Query: 174 FKCLESITNAHDDAINAVALSDDGD---VYTGSADKKIKVWRRSPGNKKHSLVDVLERHN 230
F H+ +N V GD + +G+ D+ +K+W NK + V LE H
Sbjct: 176 FA--NFTLEGHEKGVNCVDYYHGGDKPYLISGADDRLVKIWDYQ--NK--TCVQTLEGHA 229
Query: 231 SGINALALSCDGSVLYSGACDRSIIVW 257
I+A+ + ++ +G+ D ++ +W
Sbjct: 230 QNISAVCFHPELPIVLTGSEDGTVRIW 256
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 166 (63.5 bits), Expect = 9.0e-10, P = 9.0e-10
Identities = 59/212 (27%), Positives = 90/212 (42%)
Query: 141 HVDAVSALALTK-DETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD- 198
H V++ T+ L+ S S D T K+W +++ + + I AV+ SD D
Sbjct: 137 HSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTFPDKYQ--ITAVSFSDAADK 194
Query: 199 VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWE 258
++TG D +KVW G +L E H I ++LS DGS L + D + VW+
Sbjct: 195 IFTGGVDNDVKVWDLRKGEATMTL----EGHQDTITGMSLSPDGSYLLTNGMDNKLCVWD 250
Query: 259 KEEDDGNILVVGALRGHT----KSILCMAVVSD--LVCSGSADKTIRIWRGIDRNYTCLA 312
V GH K++L + D V +GS+D+ + IW R +
Sbjct: 251 MRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWDTTSRR--TIY 308
Query: 313 VLEGHRGPV-KCLAAAIDN--DRCDSSDTSYL 341
L GH G V +C+ + C S YL
Sbjct: 309 KLPGHTGSVNECVFHPTEPIIGSCSSDKNIYL 340
Score = 153 (58.9 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 68/308 (22%), Positives = 125/308 (40%)
Query: 15 LKGHNSYVSSLAL--AGKFLYTGSSDNEVRSW----DCNTFSSELDQEFLSNNNIVAVGK 68
L GH S V ++ AG + +GS D E+ W DC F ++ K
Sbjct: 49 LSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFM------------VLKGHK 96
Query: 69 GAVKSLVVLAD--KLFSAHQDHKIRVWKINNQEP-----DHQKYTRLATLPTLGDRAIKL 121
A+ L +D ++ SA D +R W + + +H + + PT + +
Sbjct: 97 NAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVN-SCCPTRRGPPLII 155
Query: 122 LMPKNHV----QIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCL 177
+ +R+ ++A++ + +++ D +K+W +
Sbjct: 156 SGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEAT 215
Query: 178 ESITNAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINAL 236
++ H D I ++LS DG + T D K+ VW P ++ V + E H
Sbjct: 216 MTL-EGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKN 274
Query: 237 ALSC----DGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSIL-CMAVVSD-LVC 290
L C DG+ + +G+ DR + +W D + + L GHT S+ C+ ++ ++
Sbjct: 275 LLKCSWSPDGTKVTAGSSDRMVHIW----DTTSRRTIYKLPGHTGSVNECVFHPTEPIIG 330
Query: 291 SGSADKTI 298
S S+DK I
Sbjct: 331 SCSSDKNI 338
Score = 133 (51.9 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 49/221 (22%), Positives = 91/221 (41%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVALSDDGD-- 198
H +A+ L T D + + S S D+T++ W K ++ + H +N+ + G
Sbjct: 95 HKNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAE-HSSFVNSCCPTRRGPPL 153
Query: 199 VYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWE 258
+ +GS D K+W + D + I A++ S +++G D + VW+
Sbjct: 154 IISGSDDGTAKLWDMRQRGAIQTFPDKYQ-----ITAVSFSDAADKIFTGGVDNDVKVWD 208
Query: 259 KEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIW--RGIDRNYTCLAVL 314
+ + + L GH +I M++ D + + D + +W R C+ +
Sbjct: 209 LRKGEATM----TLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIF 264
Query: 315 EGHRGPV-KCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVW 354
EGH+ K L +C S V +GS D + +W
Sbjct: 265 EGHQHNFEKNLL------KCSWSPDGTKVTAGSSDRMVHIW 299
Score = 125 (49.1 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 46/188 (24%), Positives = 81/188 (43%)
Query: 170 RTSDFKCLESITNAHDDAINAVALSDDGD-VYTGSADKKIKVWRRSPGNKKHSLVDVLER 228
RTS + + + H A+ + + G + +GS D++I +WR G+ K+ +V L+
Sbjct: 38 RTSSLEAPIMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVH-GDCKNFMV--LKG 94
Query: 229 HNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDL 288
H + I L + DGS + S + D+++ W+ E I + S L
Sbjct: 95 HKNAILDLHWTSDGSQIVSASPDKTVRAWDVETGK-QIKKMAEHSSFVNSCCPTRRGPPL 153
Query: 289 VCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLD 348
+ SGS D T ++W D RG ++ SD + + +G +D
Sbjct: 154 IISGSDDGTAKLW---DMR---------QRGAIQTFPDKYQITAVSFSDAADKIFTGGVD 201
Query: 349 CDIKVWQI 356
D+KVW +
Sbjct: 202 NDVKVWDL 209
Score = 118 (46.6 bits), Expect = 0.00026, P = 0.00026
Identities = 42/145 (28%), Positives = 66/145 (45%)
Query: 217 NKKHSL---VDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEKEEDDGNILVVGALR 273
N+ SL + +L H S + + + G+++ SG+ DR I +W D N +V L+
Sbjct: 37 NRTSSLEAPIMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMV---LK 93
Query: 274 GHTKSILCMAVVSD--LVCSGSADKTIRIWRGIDRNYTCLAVLEGHRGPVKCLAAAIDND 331
GH +IL + SD + S S DKT+R W ++ + E H V N
Sbjct: 94 GHKNAILDLHWTSDGSQIVSASPDKTVRAW-DVETGKQIKKMAE-HSSFV--------NS 143
Query: 332 RCDSSDTSYLVCSGSLDCDIKVWQI 356
C + L+ SGS D K+W +
Sbjct: 144 CCPTRRGPPLIISGSDDGTAKLWDM 168
>SGD|S000004212 [details] [associations]
symbol:UTP13 "Nucleolar protein" species:4932 "Saccharomyces
cerevisiae" [GO:0005634 "nucleus" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0030686 "90S preribosome"
evidence=IDA] [GO:0030515 "snoRNA binding" evidence=IPI]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0034388
"Pwp2p-containing subcomplex of 90S preribosome" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0032040 "small-subunit processome"
evidence=IEA;IDA] [GO:0000480 "endonucleolytic cleavage in 5'-ETS
of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000004212 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030515
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006945
EMBL:U19027 GO:GO:0032040 GO:GO:0000447 GO:GO:0000472 GO:GO:0000480
GO:GO:0034388 HOGENOM:HOG000188765 KO:K14555
GeneTree:ENSGT00690000102183 OrthoDB:EOG4DZ53K PIR:S51445
RefSeq:NP_013323.1 ProteinModelPortal:Q05946 SMR:Q05946
DIP:DIP-4790N IntAct:Q05946 MINT:MINT-501291 STRING:Q05946
PaxDb:Q05946 PeptideAtlas:Q05946 EnsemblFungi:YLR222C GeneID:850919
KEGG:sce:YLR222C CYGD:YLR222c OMA:ADSKLIR NextBio:967338
Genevestigator:Q05946 GermOnline:YLR222C Uniprot:Q05946
Length = 817
Score = 162 (62.1 bits), Expect = 9.2e-10, Sum P(2) = 9.2e-10
Identities = 60/232 (25%), Positives = 99/232 (42%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITN---AHDDAINAVALSD-- 195
H D +++L T+D + + S D T +WR ++ C I H A+ AV L +
Sbjct: 387 HEDLLNSLDATEDGLWIATASKDNTAIVWRYNENSCKFDIYAKYIGHSAAVTAVGLPNIV 446
Query: 196 -DGD---VYTGSADKKIKVW--RRSPGNKKHSLVDVLE----RHNSGINALALSCDGSVL 245
G + T S D IK W + + ++ V E H INAL++S + S+
Sbjct: 447 SKGYPEFLLTASNDLTIKKWIIPKPTASMDVQIIKVSEYTRHAHEKDINALSVSPNDSIF 506
Query: 246 YSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSDLVCSGSADKTIRIWRGID 305
+ + D++ +W E + + RG C L+ + S DKT++IW +D
Sbjct: 507 ATASYDKTCKIWNLENGELEATLANHKRGLWDVSFCQ--YDKLLATSSGDKTVKIW-SLD 563
Query: 306 RNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQIS 357
++ + LEGH V+ RC + + S D IK+W S
Sbjct: 564 -TFSVMKTLEGHTNAVQ---------RCSFINKQKQLISCGADGLIKIWDCS 605
Score = 147 (56.8 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 57/218 (26%), Positives = 99/218 (45%)
Query: 138 WVHHVDAVSALAL----TKD-ETLLYSVSWDRTIKIW------RTSD---FKCLESITNA 183
++ H AV+A+ L +K L + S D TIK W + D K E +A
Sbjct: 430 YIGHSAAVTAVGLPNIVSKGYPEFLLTASNDLTIKKWIIPKPTASMDVQIIKVSEYTRHA 489
Query: 184 HDDAINAVALSDDGDVY-TGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDG 242
H+ INA+++S + ++ T S DK K+W G + +L + H G+ ++
Sbjct: 490 HEKDINALSVSPNDSIFATASYDKTCKIWNLENGELEATLAN----HKRGLWDVSFCQYD 545
Query: 243 SVLYSGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVS---DLVCSGSADKTIR 299
+L + + D+++ +W + V+ L GHT ++ + ++ L+ G AD I+
Sbjct: 546 KLLATSSGDKTVKIWSLD----TFSVMKTLEGHTNAVQRCSFINKQKQLISCG-ADGLIK 600
Query: 300 IWRGIDRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSD 337
IW CL L+GH + L+ D D S+D
Sbjct: 601 IWDCSSGE--CLKTLDGHNNRLWALSTMNDGDMIVSAD 636
Score = 135 (52.6 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 42/178 (23%), Positives = 80/178 (44%)
Query: 128 VQIRRHKTCTWVHHVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDA 187
VQI + T H ++AL+++ ++++ + S+D+T KIW + + ++ N H
Sbjct: 477 VQIIKVSEYTRHAHEKDINALSVSPNDSIFATASYDKTCKIWNLENGELEATLAN-HKRG 535
Query: 188 INAVALSD-DGDVYTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLY 246
+ V+ D + T S DK +K+W S++ LE H + + + L
Sbjct: 536 LWDVSFCQYDKLLATSSGDKTVKIWSLDT----FSVMKTLEGHTNAVQRCSFINKQKQLI 591
Query: 247 SGACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIWR 302
S D I +W+ G L L GH + ++ ++D ++ S AD + W+
Sbjct: 592 SCGADGLIKIWDCSS--GECLKT--LDGHNNRLWALSTMNDGDMIVSADADGVFQFWK 645
Score = 59 (25.8 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 24/85 (28%), Positives = 39/85 (45%)
Query: 16 KGHNSYVSSLALA--GKFLYTGSSDNEVRSWDCNTFSSELD--QEFLSNNNIV-AVGKGA 70
+GH ++SL G ++ T S DN W N S + D +++ ++ V AVG
Sbjct: 385 EGHEDLLNSLDATEDGLWIATASKDNTAIVWRYNENSCKFDIYAKYIGHSAAVTAVGLPN 444
Query: 71 VKSLVVLADKLFSAHQDHKIRVWKI 95
+ S + L +A D I+ W I
Sbjct: 445 IVSKGY-PEFLLTASNDLTIKKWII 468
Score = 55 (24.4 bits), Expect = 9.2e-10, Sum P(2) = 9.2e-10
Identities = 32/139 (23%), Positives = 55/139 (39%)
Query: 6 VVDHHCLTTLKGHNSYVSSLALA--------GKFLYTGSSDNEVRSWDCNTFSS-ELDQE 56
+V CL TL+ H S V L + L +G D+ + WD N +L +
Sbjct: 177 LVKRKCLHTLQEHTSAVRGLDIIEVPDNDEPSLNLLSGGRDDIINLWDFNMKKKCKLLKT 236
Query: 57 FLSNNNIVAVG---KGAVKSLVVLA--DKLFSAHQDHKIRVWKINNQEPDHQKYTRLATL 111
N + + G G K ++ A D +F V K N+ P + + + L
Sbjct: 237 LPVNQQVESCGFLKDGDGKRIIYTAGGDAIFQLIDSESGSVLKRTNK-PIEELFI-IGVL 294
Query: 112 PTLGDRAIKLLMPKNHVQI 130
P L + + L++ +Q+
Sbjct: 295 PILSNSQMFLVLSDQTLQL 313
Score = 50 (22.7 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 30/109 (27%), Positives = 43/109 (39%)
Query: 14 TLKGHNSYVSSLALAGKF------LYTGSSDNEVRSWDC-NTFSSELDQEFLS---NNNI 63
+ KGH +SSL G+ L +G ++ V+ WD QE S +I
Sbjct: 139 SFKGHGGTISSLKFYGQLNSKIWLLASGDTNGMVKVWDLVKRKCLHTLQEHTSAVRGLDI 198
Query: 64 VAVGKGAVKSLVVLADKLFSAHQDHKIRVWKINNQEPDHQKYTRLATLP 112
+ V SL L S +D I +W N ++ K L TLP
Sbjct: 199 IEVPDNDEPSL-----NLLSGGRDDIINLWDFNMKK----KCKLLKTLP 238
>UNIPROTKB|F1SP81 [details] [associations]
symbol:PLAA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016005 "phospholipase A2 activator activity"
evidence=IEA] [GO:0006954 "inflammatory response" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0006954 GO:GO:0016005
GeneTree:ENSGT00550000074944 InterPro:IPR015155 InterPro:IPR013535
Pfam:PF09070 Pfam:PF08324 PROSITE:PS51394 PROSITE:PS51396
OMA:VSECCRF EMBL:CU313306 EMBL:CU915318 Ensembl:ENSSSCT00000005651
Uniprot:F1SP81
Length = 804
Score = 172 (65.6 bits), Expect = 9.6e-10, P = 9.6e-10
Identities = 59/166 (35%), Positives = 86/166 (51%)
Query: 141 HVDAVSALALTKDETLLYSVSWDRTIKIWRTSDFKCLESITNAHDDAINAVA-LSDDGDV 199
H + V +L+ K TLL S SWD T K+W +D KC+ ++ H A+ AV L + G +
Sbjct: 115 HKNTVCSLSSGKFGTLL-SGSWDTTAKVW-LND-KCMMTL-QGHTAAVWAVKILPEQGLM 170
Query: 200 YTGSADKKIKVWRRSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSGACDRSIIVWEK 259
TGSADK IK+W+ G + + D+ H + LA+ + L S A D SI W+
Sbjct: 171 LTGSADKTIKLWKA--GRCERTFSDI--GHEDCVRGLAILSETEFL-SCANDASIRKWQI 225
Query: 260 EEDDGNILVVGALRGHTKSILCMAVV---SDLVCSGSADKTIRIWR 302
G L V GHT I ++V D V +G D+++RIW+
Sbjct: 226 T---GECLEV--FYGHTNYIYSISVFPNCKDFVTTGE-DRSLRIWK 265
Score = 144 (55.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 59/233 (25%), Positives = 108/233 (46%)
Query: 140 HHVDAVSALALTKDETLLYSVSWDRTIKIWRTSD----FKCLESITNAHDDAINAVALSD 195
H +D + SVS DRT ++W F + ++ H + ++ V +
Sbjct: 21 HELDVRGLVCCLYPPGAFVSVSRDRTTRLWVPDSPNRGFTEMHCMSG-HSNFVSCVCIIP 79
Query: 196 DGDVY------TGSADKKIKVWR-RSPGNKKHSLVDVLERHNSGINALALSCDGSVLYSG 248
D+Y TG D I ++ SP + VL+ H + + +L+ G++L SG
Sbjct: 80 SSDMYPHGLIATGGNDHNICIFSLESPAP-----LYVLKGHKNTVCSLSSGKFGTLL-SG 133
Query: 249 ACDRSIIVWEKEEDDGNILVVGALRGHTKSILCMAVVSD--LVCSGSADKTIRIWRG--I 304
+ D + VW ++ + L+GHT ++ + ++ + L+ +GSADKTI++W+
Sbjct: 134 SWDTTAKVWLNDK------CMMTLQGHTAAVWAVKILPEQGLMLTGSADKTIKLWKAGRC 187
Query: 305 DRNYTCLAVLEGHRGPVKCLAAAIDNDRCDSSDTSYLVCSGSLDCDIKVWQIS 357
+R ++ + GH V+ LA S+T +L C+ D I+ WQI+
Sbjct: 188 ERTFSDI----GHEDCVRGLAIL--------SETEFLSCAN--DASIRKWQIT 226
WARNING: HSPs involving 677 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.133 0.412 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 362 362 0.00082 117 3 11 22 0.38 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 927
No. of states in DFA: 614 (65 KB)
Total size of DFA: 273 KB (2140 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 30.41u 0.18s 30.59t Elapsed: 00:00:01
Total cpu time: 30.59u 0.18s 30.77t Elapsed: 00:00:01
Start: Thu May 9 23:27:28 2013 End: Thu May 9 23:27:29 2013
WARNINGS ISSUED: 2