BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044561
(614 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 109/287 (37%), Positives = 176/287 (61%), Gaps = 5/287 (1%)
Query: 333 QRFTYKDLYKATKGFKDKDVIGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIK-EFVAE 391
+RF+ ++L A+ F +K+++GRGGFGKVY+G LA +AVK++ + QG + +F E
Sbjct: 26 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTE 85
Query: 392 LVSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHT--NIKPCLNWYQRFRII 449
+ + HRNL++LRG+C E LLVY YM NGS+ L +P L+W +R RI
Sbjct: 86 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 145
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG 509
G A GL YLH+ + ++HRD+K AN+LLD + +GDFGLA+L D+ + G
Sbjct: 146 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRG 205
Query: 510 TFGYMDPELMRTGKASTSTDVYAFGVFMLEVASGRRPVE--QQGSMETVNLVDWVCDCWK 567
T G++ PE + TGK+S TDV+ +GV +LE+ +G+R + + + + V L+DWV K
Sbjct: 206 TIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK 265
Query: 568 KGAIRDASDSRLEGICEEKQMELVLKLGLFCSHPKPEARPNMRQVMQ 614
+ + D L+G +++++E ++++ L C+ P RP M +V++
Sbjct: 266 EKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVR 312
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 108/287 (37%), Positives = 175/287 (60%), Gaps = 5/287 (1%)
Query: 333 QRFTYKDLYKATKGFKDKDVIGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIK-EFVAE 391
+RF+ ++L A+ F +K+++GRGGFGKVY+G LA +AVK++ + QG + +F E
Sbjct: 18 KRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTE 77
Query: 392 LVSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHT--NIKPCLNWYQRFRII 449
+ + HRNL++LRG+C E LLVY YM NGS+ L +P L+W +R RI
Sbjct: 78 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 137
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG 509
G A GL YLH+ + ++HRD+K AN+LLD + +GDFGLA+L D+ + G
Sbjct: 138 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRG 197
Query: 510 TFGYMDPELMRTGKASTSTDVYAFGVFMLEVASGRRPVE--QQGSMETVNLVDWVCDCWK 567
G++ PE + TGK+S TDV+ +GV +LE+ +G+R + + + + V L+DWV K
Sbjct: 198 XIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK 257
Query: 568 KGAIRDASDSRLEGICEEKQMELVLKLGLFCSHPKPEARPNMRQVMQ 614
+ + D L+G +++++E ++++ L C+ P RP M +V++
Sbjct: 258 EKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVR 304
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 168 bits (426), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 100/283 (35%), Positives = 151/283 (53%), Gaps = 6/283 (2%)
Query: 334 RFTYKDLYKATKGFKDKDVIGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELV 393
R DL +AT F K +IG G FGKVY+GVL ++A+K+ + +S QGI+EF E+
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 394 SMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPC--LNWYQRFRIIRG 451
++ RH +LV L G+C + E +L+Y YM NG+L + L+ + P ++W QR I G
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 452 VASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARL-YDHDTIPQTTKLVGT 510
A GL YLH + ++HRD+K N+LLD + K+ DFG+++ + D + GT
Sbjct: 148 AARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGT 204
Query: 511 FGYMDPELMRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWVCDCWKKGA 570
GY+DPE G+ + +DVY+FGV + EV R + Q E VNL +W + G
Sbjct: 205 LGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ 264
Query: 571 IRDASDSRLEGICEEKQMELVLKLGLFCSHPKPEARPNMRQVM 613
+ D L + + + C E RP+M V+
Sbjct: 265 LEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 100/283 (35%), Positives = 150/283 (53%), Gaps = 6/283 (2%)
Query: 334 RFTYKDLYKATKGFKDKDVIGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELV 393
R DL +AT F K +IG G FGKVY+GVL ++A+K+ + +S QGI+EF E+
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 394 SMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPC--LNWYQRFRIIRG 451
++ RH +LV L G+C + E +L+Y YM NG+L + L+ + P ++W QR I G
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 452 VASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLV-GT 510
A GL YLH + ++HRD+K N+LLD + K+ DFG+++ +V GT
Sbjct: 148 AARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGT 204
Query: 511 FGYMDPELMRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWVCDCWKKGA 570
GY+DPE G+ + +DVY+FGV + EV R + Q E VNL +W + G
Sbjct: 205 LGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ 264
Query: 571 IRDASDSRLEGICEEKQMELVLKLGLFCSHPKPEARPNMRQVM 613
+ D L + + + C E RP+M V+
Sbjct: 265 LEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/294 (33%), Positives = 163/294 (55%), Gaps = 23/294 (7%)
Query: 335 FTYKDLYKATKGFKDKDV------IGRGGFGKVYRGVLASNVQIAVKK----VSHDSKQG 384
F++ +L T F ++ + +G GGFG VY+G + +N +AVKK V +++
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 385 IKEFVAELVSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGS-LDKILHTNIKPCLNWY 443
++F E+ M + +H NLV+L G+ + LVY YMPNGS LD++ + P L+W+
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 444 QRFRIIRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQ 503
R +I +G A+G+ +LHE+ +HRDIK AN+LLD K+ DFGLAR + Q
Sbjct: 134 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARA--SEKFAQ 188
Query: 504 T---TKLVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVD 560
T +++VGT YM PE +R G+ + +D+Y+FGV +LE+ +G V++ + + L
Sbjct: 189 TVMXSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLL-LDI 246
Query: 561 WVCDCWKKGAIRDASDSRLEGICEEKQMELVLKLGLFCSHPKPEARPNMRQVMQ 614
++ I D D ++ + +E + + C H K RP++++V Q
Sbjct: 247 KEEIEDEEKTIEDYIDKKMND-ADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQ 299
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 98/294 (33%), Positives = 162/294 (55%), Gaps = 23/294 (7%)
Query: 335 FTYKDLYKATKGFKDKDV------IGRGGFGKVYRGVLASNVQIAVKK----VSHDSKQG 384
F++ +L T F ++ + +G GGFG VY+G + +N +AVKK V +++
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 385 IKEFVAELVSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGS-LDKILHTNIKPCLNWY 443
++F E+ M + +H NLV+L G+ + LVY YMPNGS LD++ + P L+W+
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 444 QRFRIIRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQ 503
R +I +G A+G+ +LHE+ +HRDIK AN+LLD K+ DFGLAR + Q
Sbjct: 134 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARA--SEKFAQ 188
Query: 504 TT---KLVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVD 560
T ++VGT YM PE +R G+ + +D+Y+FGV +LE+ +G V++ + + L
Sbjct: 189 TVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLL-LDI 246
Query: 561 WVCDCWKKGAIRDASDSRLEGICEEKQMELVLKLGLFCSHPKPEARPNMRQVMQ 614
++ I D D ++ + +E + + C H K RP++++V Q
Sbjct: 247 KEEIEDEEKTIEDYIDKKMND-ADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQ 299
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 151 bits (382), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 96/292 (32%), Positives = 160/292 (54%), Gaps = 19/292 (6%)
Query: 335 FTYKDLYKATKGFKDKDV------IGRGGFGKVYRGVLASNVQIAVKK----VSHDSKQG 384
F++ +L T F ++ + +G GGFG VY+G + +N +AVKK V +++
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 67
Query: 385 IKEFVAELVSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGS-LDKILHTNIKPCLNWY 443
++F E+ M + +H NLV+L G+ + LVY YMPNGS LD++ + P L+W+
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 127
Query: 444 QRFRIIRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDH-DTIP 502
R +I +G A+G+ +LHE+ +HRDIK AN+LLD K+ DFGLAR +
Sbjct: 128 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 184
Query: 503 QTTKLVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWV 562
++VGT YM PE +R G+ + +D+Y+FGV +LE+ +G V++ + + L
Sbjct: 185 MXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLL-LDIKE 242
Query: 563 CDCWKKGAIRDASDSRLEGICEEKQMELVLKLGLFCSHPKPEARPNMRQVMQ 614
++ I D D ++ + +E + + C H K RP++++V Q
Sbjct: 243 EIEDEEKTIEDYIDKKMND-ADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQ 293
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 155/292 (53%), Gaps = 19/292 (6%)
Query: 335 FTYKDLYKATKGFKDKDV------IGRGGFGKVYRGVLASNVQIAVKK----VSHDSKQG 384
F++ +L T F ++ + G GGFG VY+G + +N +AVKK V +++
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 64
Query: 385 IKEFVAELVSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSL-DKILHTNIKPCLNWY 443
++F E+ + +H NLV+L G+ + LVY Y PNGSL D++ + P L+W+
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWH 124
Query: 444 QRFRIIRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDH-DTIP 502
R +I +G A+G+ +LHE+ +HRDIK AN+LLD K+ DFGLAR +
Sbjct: 125 XRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 181
Query: 503 QTTKLVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWV 562
+++VGT Y PE +R G+ + +D+Y+FGV +LE+ +G V++ + + L
Sbjct: 182 XXSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLL-LDIKE 239
Query: 563 CDCWKKGAIRDASDSRLEGICEEKQMELVLKLGLFCSHPKPEARPNMRQVMQ 614
++ I D D + + +E + C H K RP++++V Q
Sbjct: 240 EIEDEEKTIEDYIDKKXND-ADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQ 290
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 139/283 (49%), Gaps = 48/283 (16%)
Query: 350 KDVIGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFV------AELVSMGRLRHRNL 403
+++IG GGFGKVYR + ++AVK HD + I + + A+L +M L+H N+
Sbjct: 12 EEIIGIGGFGKVYRAFWIGD-EVAVKAARHDPDEDISQTIENVRQEAKLFAM--LKHPNI 68
Query: 404 VKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKP---CLNWYQRFRIIRGVASGLLYLH 460
+ LRG C ++ LV ++ G L+++L P +NW + +A G+ YLH
Sbjct: 69 IALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQ------IARGMNYLH 122
Query: 461 EDWEQVVLHRDIKPANVLL-----DADLNG---KLGDFGLARLYDHDTIPQTTKL--VGT 510
++ ++HRD+K +N+L+ + DL+ K+ DFGLAR + +TTK+ G
Sbjct: 123 DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWH-----RTTKMSAAGA 177
Query: 511 FGYMDPELMRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWVCDCWKKGA 570
+ +M PE++R S +DV+++GV + E+ +G P + G
Sbjct: 178 YAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVA-----------YGV 226
Query: 571 IRDASDSRLEGICEEKQMELVLKLGLFCSHPKPEARPNMRQVM 613
+ + C E +L+ C +P P +RP+ ++
Sbjct: 227 AMNKLALPIPSTCPEPFAKLMED----CWNPDPHSRPSFTNIL 265
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 113/216 (52%), Gaps = 4/216 (1%)
Query: 350 KDVIGRGGFGKVYRGVL-ASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRG 408
K+ IG G FG V+R S+V + + + + EF+ E+ M RLRH N+V G
Sbjct: 42 KEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMG 101
Query: 409 YCRRKGEFLLVYDYMPNGSLDKILH-TNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVV 467
+ +V +Y+ GSL ++LH + + L+ +R + VA G+ YLH +
Sbjct: 102 AVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPI 160
Query: 468 LHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTS 527
+HR++K N+L+D K+ DFGL+RL T + GT +M PE++R ++
Sbjct: 161 VHRNLKSPNLLVDKKYTVKVCDFGLSRL-KASTFLSSKSAAGTPEWMAPEVLRDEPSNEK 219
Query: 528 TDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWVC 563
+DVY+FGV + E+A+ ++P + V V + C
Sbjct: 220 SDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKC 255
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 113/216 (52%), Gaps = 4/216 (1%)
Query: 350 KDVIGRGGFGKVYRGVL-ASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRG 408
K+ IG G FG V+R S+V + + + + EF+ E+ M RLRH N+V G
Sbjct: 42 KEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMG 101
Query: 409 YCRRKGEFLLVYDYMPNGSLDKILH-TNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVV 467
+ +V +Y+ GSL ++LH + + L+ +R + VA G+ YLH +
Sbjct: 102 AVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPI 160
Query: 468 LHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTS 527
+HRD+K N+L+D K+ DFGL+RL + + GT +M PE++R ++
Sbjct: 161 VHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFL-XSKXAAGTPEWMAPEVLRDEPSNEK 219
Query: 528 TDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWVC 563
+DVY+FGV + E+A+ ++P + V V + C
Sbjct: 220 SDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKC 255
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 136/271 (50%), Gaps = 42/271 (15%)
Query: 335 FTYKDLYKATKGF---------KDKDVIGRGGFGKVYRGVLA----SNVQIAVK--KVSH 379
FT++D +A + F K + VIG G FG+V G L + +A+K K +
Sbjct: 14 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 73
Query: 380 DSKQGIKEFVAELVSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPC 439
KQ ++F++E MG+ H N++ L G + +++ ++M NGSLD L N
Sbjct: 74 TEKQR-RDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQN-DGQ 131
Query: 440 LNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHD 499
Q ++RG+A+G+ YL + +HRD+ N+L++++L K+ DFGL+R + D
Sbjct: 132 FTVIQLVGMLRGIAAGMKYLA---DMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD 188
Query: 500 TI-PQTTKLVG---TFGYMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSME 554
T P T +G + PE ++ K ++++DV+++G+ M EV S G RP + +
Sbjct: 189 TSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQD 248
Query: 555 TVNLVD-----------------WVCDCWKK 568
+N ++ + DCW+K
Sbjct: 249 VINAIEQDYRLPPPMDCPSALHQLMLDCWQK 279
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 123/243 (50%), Gaps = 31/243 (12%)
Query: 352 VIGRGGFGKVYRGVLA----SNVQIAVK--KVSHDSKQGIKEFVAELVSMGRLRHRNLVK 405
V+G G FG+V G L + +A+K KV + KQ ++F+ E MG+ H N+++
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIMGQFDHPNIIR 110
Query: 406 LRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQ 465
L G + ++V +YM NGSLD L + Q ++RG+ASG+ YL +
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLRGIASGMKYLS---DM 166
Query: 466 VVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFG--YMDPELMRTGK 523
+HRD+ N+L++++L K+ DFGLAR+ + D T G + PE + K
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 524 ASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVD-----------------WVCDC 565
++++DV+++G+ + EV S G RP + + + + VD + DC
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDC 286
Query: 566 WKK 568
W+K
Sbjct: 287 WQK 289
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 122/221 (55%), Gaps = 15/221 (6%)
Query: 350 KDVIGRGGFGKVYRGVLASN-----VQIAVK--KVSHDSKQGIKEFVAELVSMGRLRHRN 402
+ VIG G FG+VY+G+L ++ V +A+K K + KQ + +F+ E MG+ H N
Sbjct: 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRV-DFLGEAGIMGQFSHHN 107
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHED 462
+++L G + +++ +YM NG+LDK L + Q ++RG+A+G+ YL
Sbjct: 108 IIRLEGVISKYKPMMIITEYMENGALDKFLREKDGE-FSVLQLVGMLRGIAAGMKYLA-- 164
Query: 463 WEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFG--YMDPELMR 520
+HRD+ N+L++++L K+ DFGL+R+ + D T G + PE +
Sbjct: 165 -NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAIS 223
Query: 521 TGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVD 560
K ++++DV++FG+ M EV + G RP + + E + ++
Sbjct: 224 YRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAIN 264
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 126/249 (50%), Gaps = 33/249 (13%)
Query: 348 KDKDVIGRGGFGKVYRGVLA------SNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHR 401
K ++VIG G FG+V RG L S V I K + +Q +EF++E MG+ H
Sbjct: 19 KIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQR-REFLSEASIMGQFEHP 77
Query: 402 NLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHE 461
N+++L G +++ ++M NG+LD L N Q ++RG+ASG+ YL
Sbjct: 78 NIIRLEGVVTNSMPVMILTEFMENGALDSFLRLN-DGQFTVIQLVGMLRGIASGMRYLA- 135
Query: 462 DWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDHDTIPQTTKLVG---TFGYMDPE 517
E +HRD+ N+L++++L K+ DFGL+R L ++ + P T +G + PE
Sbjct: 136 --EMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPE 193
Query: 518 LMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVD---------------- 560
+ K ++++D +++G+ M EV S G RP + + +N ++
Sbjct: 194 AIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLPPPPDCPTSLH 253
Query: 561 -WVCDCWKK 568
+ DCW+K
Sbjct: 254 QLMLDCWQK 262
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 123/243 (50%), Gaps = 31/243 (12%)
Query: 352 VIGRGGFGKVYRGVLA----SNVQIAVK--KVSHDSKQGIKEFVAELVSMGRLRHRNLVK 405
V+G G FG+V G L + +A+K KV + KQ ++F+ E MG+ H N+++
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIMGQFDHPNIIR 110
Query: 406 LRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQ 465
L G + ++V +YM NGSLD L + Q ++RG+ASG+ YL +
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLRGIASGMKYLS---DM 166
Query: 466 VVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFG--YMDPELMRTGK 523
+HRD+ N+L++++L K+ DFGL+R+ + D T G + PE + K
Sbjct: 167 GFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 524 ASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVD-----------------WVCDC 565
++++DV+++G+ + EV S G RP + + + + VD + DC
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDC 286
Query: 566 WKK 568
W+K
Sbjct: 287 WQK 289
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 123/243 (50%), Gaps = 31/243 (12%)
Query: 352 VIGRGGFGKVYRGVLA----SNVQIAVK--KVSHDSKQGIKEFVAELVSMGRLRHRNLVK 405
V+G G FG+V G L + +A+K KV + KQ ++F+ E MG+ H N+++
Sbjct: 23 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIMGQFDHPNIIR 81
Query: 406 LRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQ 465
L G + ++V +YM NGSLD L + Q ++RG+ASG+ YL +
Sbjct: 82 LEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLRGIASGMKYLS---DM 137
Query: 466 VVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFG--YMDPELMRTGK 523
+HRD+ N+L++++L K+ DFGL+R+ + D T G + PE + K
Sbjct: 138 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 197
Query: 524 ASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVD-----------------WVCDC 565
++++DV+++G+ + EV S G RP + + + + VD + DC
Sbjct: 198 FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDC 257
Query: 566 WKK 568
W+K
Sbjct: 258 WQK 260
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 123/243 (50%), Gaps = 31/243 (12%)
Query: 352 VIGRGGFGKVYRGVLA----SNVQIAVK--KVSHDSKQGIKEFVAELVSMGRLRHRNLVK 405
V+G G FG+V G L + +A+K KV + KQ ++F+ E MG+ H N+++
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIMGQFDHPNIIR 110
Query: 406 LRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQ 465
L G + ++V +YM NGSLD L + Q ++RG+ASG+ YL +
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLRGIASGMKYLS---DM 166
Query: 466 VVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFG--YMDPELMRTGK 523
+HRD+ N+L++++L K+ DFGL+R+ + D T G + PE + K
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 524 ASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVD-----------------WVCDC 565
++++DV+++G+ + EV S G RP + + + + VD + DC
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDC 286
Query: 566 WKK 568
W+K
Sbjct: 287 WQK 289
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 123/243 (50%), Gaps = 31/243 (12%)
Query: 352 VIGRGGFGKVYRGVLA----SNVQIAVK--KVSHDSKQGIKEFVAELVSMGRLRHRNLVK 405
V+G G FG+V G L + +A+K KV + KQ ++F+ E MG+ H N+++
Sbjct: 50 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIMGQFDHPNIIR 108
Query: 406 LRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQ 465
L G + ++V +YM NGSLD L + Q ++RG+ASG+ YL +
Sbjct: 109 LEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLRGIASGMKYLS---DM 164
Query: 466 VVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFG--YMDPELMRTGK 523
+HRD+ N+L++++L K+ DFGL+R+ + D T G + PE + K
Sbjct: 165 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 224
Query: 524 ASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVD-----------------WVCDC 565
++++DV+++G+ + EV S G RP + + + + VD + DC
Sbjct: 225 FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDC 284
Query: 566 WKK 568
W+K
Sbjct: 285 WQK 287
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 123/243 (50%), Gaps = 31/243 (12%)
Query: 352 VIGRGGFGKVYRGVLA----SNVQIAVK--KVSHDSKQGIKEFVAELVSMGRLRHRNLVK 405
V+G G FG+V G L + +A+K KV + KQ ++F+ E MG+ H N+++
Sbjct: 40 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIMGQFDHPNIIR 98
Query: 406 LRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQ 465
L G + ++V +YM NGSLD L + Q ++RG+ASG+ YL +
Sbjct: 99 LEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLRGIASGMKYLS---DM 154
Query: 466 VVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFG--YMDPELMRTGK 523
+HRD+ N+L++++L K+ DFGL+R+ + D T G + PE + K
Sbjct: 155 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 214
Query: 524 ASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVD-----------------WVCDC 565
++++DV+++G+ + EV S G RP + + + + VD + DC
Sbjct: 215 FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDC 274
Query: 566 WKK 568
W+K
Sbjct: 275 WQK 277
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 123/243 (50%), Gaps = 31/243 (12%)
Query: 352 VIGRGGFGKVYRGVLA----SNVQIAVK--KVSHDSKQGIKEFVAELVSMGRLRHRNLVK 405
V+G G FG+V G L + +A+K KV + KQ ++F+ E MG+ H N+++
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIMGQFDHPNIIR 110
Query: 406 LRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQ 465
L G + ++V +YM NGSLD L + Q ++RG+ASG+ YL +
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLRGIASGMKYLS---DM 166
Query: 466 VVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFG--YMDPELMRTGK 523
+HRD+ N+L++++L K+ DFGL+R+ + D T G + PE + K
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 524 ASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVD-----------------WVCDC 565
++++DV+++G+ + EV S G RP + + + + VD + DC
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDC 286
Query: 566 WKK 568
W+K
Sbjct: 287 WQK 289
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 123/243 (50%), Gaps = 31/243 (12%)
Query: 352 VIGRGGFGKVYRGVLA----SNVQIAVK--KVSHDSKQGIKEFVAELVSMGRLRHRNLVK 405
V+G G FG+V G L + +A+K KV + KQ ++F+ E MG+ H N+++
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIMGQFDHPNIIR 110
Query: 406 LRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQ 465
L G + ++V +YM NGSLD L + Q ++RG+ASG+ YL +
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLRGIASGMKYLS---DM 166
Query: 466 VVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFG--YMDPELMRTGK 523
+HRD+ N+L++++L K+ DFGL+R+ + D T G + PE + K
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 524 ASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVD-----------------WVCDC 565
++++DV+++G+ + EV S G RP + + + + VD + DC
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDC 286
Query: 566 WKK 568
W+K
Sbjct: 287 WQK 289
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 123/243 (50%), Gaps = 31/243 (12%)
Query: 352 VIGRGGFGKVYRGVLA----SNVQIAVK--KVSHDSKQGIKEFVAELVSMGRLRHRNLVK 405
V+G G FG+V G L + +A+K KV + KQ ++F+ E MG+ H N+++
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIMGQFDHPNIIR 110
Query: 406 LRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQ 465
L G + ++V +YM NGSLD L + Q ++RG+ASG+ YL +
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLRGIASGMKYLS---DM 166
Query: 466 VVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFG--YMDPELMRTGK 523
+HRD+ N+L++++L K+ DFGL+R+ + D T G + PE + K
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 524 ASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVD-----------------WVCDC 565
++++DV+++G+ + EV S G RP + + + + VD + DC
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDC 286
Query: 566 WKK 568
W+K
Sbjct: 287 WQK 289
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 126/249 (50%), Gaps = 33/249 (13%)
Query: 348 KDKDVIGRGGFGKVYRGVLA------SNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHR 401
K ++VIG G FG+V RG L S V I K + +Q +EF++E MG+ H
Sbjct: 17 KIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQR-REFLSEASIMGQFEHP 75
Query: 402 NLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHE 461
N+++L G +++ ++M NG+LD L N Q ++RG+ASG+ YL
Sbjct: 76 NIIRLEGVVTNSMPVMILTEFMENGALDSFLRLN-DGQFTVIQLVGMLRGIASGMRYLA- 133
Query: 462 DWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDHDTIPQTTKLVG---TFGYMDPE 517
E +HRD+ N+L++++L K+ DFGL+R L ++ + P T +G + PE
Sbjct: 134 --EMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPE 191
Query: 518 LMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVD---------------- 560
+ K ++++D +++G+ M EV S G RP + + +N ++
Sbjct: 192 AIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLPPPPDCPTSLH 251
Query: 561 -WVCDCWKK 568
+ DCW+K
Sbjct: 252 QLMLDCWQK 260
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 122/243 (50%), Gaps = 31/243 (12%)
Query: 352 VIGRGGFGKVYRGVLA----SNVQIAVK--KVSHDSKQGIKEFVAELVSMGRLRHRNLVK 405
V+G G FG+V G L + +A+K KV + KQ ++F+ E MG+ H N+++
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIMGQFDHPNIIR 110
Query: 406 LRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQ 465
L G + ++V +YM NGSLD L + Q ++RG+ASG+ YL +
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLRGIASGMKYLS---DM 166
Query: 466 VVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFG--YMDPELMRTGK 523
+HRD+ N+L++++L K+ DFGL R+ + D T G + PE + K
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 524 ASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVD-----------------WVCDC 565
++++DV+++G+ + EV S G RP + + + + VD + DC
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDC 286
Query: 566 WKK 568
W+K
Sbjct: 287 WQK 289
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 122/243 (50%), Gaps = 31/243 (12%)
Query: 352 VIGRGGFGKVYRGVLA----SNVQIAVK--KVSHDSKQGIKEFVAELVSMGRLRHRNLVK 405
V+G G FG+V G L + +A+K KV + KQ ++F+ E MG+ H N+++
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIMGQFDHPNIIR 110
Query: 406 LRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQ 465
L G + ++V + M NGSLD L + Q ++RG+ASG+ YL +
Sbjct: 111 LEGVVTKSKPVMIVTEXMENGSLDSFLRKH-DAQFTVIQLVGMLRGIASGMKYLS---DM 166
Query: 466 VVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFG--YMDPELMRTGK 523
+HRD+ N+L++++L K+ DFGL+R+ + D T G + PE + K
Sbjct: 167 GAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 524 ASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVD-----------------WVCDC 565
++++DV+++G+ + EV S G RP + + + + VD + DC
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDC 286
Query: 566 WKK 568
W+K
Sbjct: 287 WQK 289
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 122/243 (50%), Gaps = 31/243 (12%)
Query: 352 VIGRGGFGKVYRGVLA----SNVQIAVK--KVSHDSKQGIKEFVAELVSMGRLRHRNLVK 405
V+G G FG+V G L + +A+K KV + KQ ++F+ E MG+ H N+++
Sbjct: 23 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIMGQFDHPNIIR 81
Query: 406 LRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQ 465
L G + ++V + M NGSLD L + Q ++RG+ASG+ YL +
Sbjct: 82 LEGVVTKSKPVMIVTEXMENGSLDSFLRKH-DAQFTVIQLVGMLRGIASGMKYLS---DM 137
Query: 466 VVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFG--YMDPELMRTGK 523
+HRD+ N+L++++L K+ DFGL+R+ + D T G + PE + K
Sbjct: 138 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 197
Query: 524 ASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVD-----------------WVCDC 565
++++DV+++G+ + EV S G RP + + + + VD + DC
Sbjct: 198 FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDC 257
Query: 566 WKK 568
W+K
Sbjct: 258 WQK 260
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 122/243 (50%), Gaps = 31/243 (12%)
Query: 352 VIGRGGFGKVYRGVLA----SNVQIAVK--KVSHDSKQGIKEFVAELVSMGRLRHRNLVK 405
V+G G FG+V G L + +A+K KV + KQ ++F+ E MG+ H N+++
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-RDFLGEASIMGQFDHPNIIR 110
Query: 406 LRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQ 465
L G + ++V + M NGSLD L + Q ++RG+ASG+ YL +
Sbjct: 111 LEGVVTKSKPVMIVTEXMENGSLDSFLRKH-DAQFTVIQLVGMLRGIASGMKYLS---DM 166
Query: 466 VVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFG--YMDPELMRTGK 523
+HRD+ N+L++++L K+ DFGL+R+ + D T G + PE + K
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 524 ASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVD-----------------WVCDC 565
++++DV+++G+ + EV S G RP + + + + VD + DC
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDC 286
Query: 566 WKK 568
W+K
Sbjct: 287 WQK 289
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 131/269 (48%), Gaps = 40/269 (14%)
Query: 335 FTYKDLYKATKGF---------KDKDVIGRGGFGKVYRGVLA----SNVQIAVK--KVSH 379
FT++D +A + F K + VIG G FG+V G L + +A+K K +
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGY 69
Query: 380 DSKQGIKEFVAELVSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPC 439
KQ ++F++E MG+ H N++ L G + +++ +YM NGSLD L N
Sbjct: 70 TDKQR-RDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKN-DGR 127
Query: 440 LNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHD 499
Q ++RG+ SG+ YL + +HRD+ N+L++++L K+ DFG++R+ + D
Sbjct: 128 FTVIQLVGMLRGIGSGMKYLS---DMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDD 184
Query: 500 TIPQTTKLVGTFG--YMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETV 556
T G + PE + K ++++DV+++G+ M EV S G RP + + +
Sbjct: 185 PEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI 244
Query: 557 NLVD-----------------WVCDCWKK 568
++ + DCW+K
Sbjct: 245 KAIEEGYRLPPPMDCPIALHQLMLDCWQK 273
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 130/268 (48%), Gaps = 40/268 (14%)
Query: 336 TYKDLYKATKGFKDK---------DVIGRGGFGKVYRGVLA----SNVQIAVK--KVSHD 380
TY+D +A F + VIG G FG+V G L + +A+K KV +
Sbjct: 4 TYEDPNQAVHEFAKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYT 63
Query: 381 SKQGIKEFVAELVSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCL 440
KQ ++F+ E MG+ H N++ L G + ++V +YM NGSLD L N
Sbjct: 64 EKQR-RDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKN-DGQF 121
Query: 441 NWYQRFRIIRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDT 500
Q ++RG+++G+ YL + +HRD+ N+L++++L K+ DFGL+R+ + D
Sbjct: 122 TVIQLVGMLRGISAGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 178
Query: 501 IPQTTKLVGTFG--YMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVN 557
T G + PE + K ++++DV+++G+ M EV S G RP + + + +
Sbjct: 179 EAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIK 238
Query: 558 LVD-----------------WVCDCWKK 568
V+ + DCW+K
Sbjct: 239 AVEEGYRLPSPMDCPAALYQLMLDCWQK 266
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 132/268 (49%), Gaps = 40/268 (14%)
Query: 336 TYKDLYKATKGF---------KDKDVIGRGGFGKVYRGVLA----SNVQIAVK--KVSHD 380
TY+D +A F K + VIG G FG+V G L +V +A+K KV +
Sbjct: 25 TYEDPNRAVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYT 84
Query: 381 SKQGIKEFVAELVSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCL 440
KQ ++F+ E MG+ H N+V L G R ++V ++M NG+LD L +
Sbjct: 85 EKQR-RDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKH-DGQF 142
Query: 441 NWYQRFRIIRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDT 500
Q ++RG+A+G+ YL + +HRD+ N+L++++L K+ DFGL+R+ + D
Sbjct: 143 TVIQLVGMLRGIAAGMRYLA---DMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDP 199
Query: 501 IPQTTKLVGTFG--YMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVN 557
T G + PE ++ K ++++DV+++G+ M EV S G RP + + +
Sbjct: 200 EAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIK 259
Query: 558 LVD-----------------WVCDCWKK 568
++ + DCW+K
Sbjct: 260 AIEEGYRLPAPMDCPAGLHQLMLDCWQK 287
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 126/249 (50%), Gaps = 33/249 (13%)
Query: 348 KDKDVIGRGGFGKVYRGVLA----SNVQIAVK--KVSHDSKQGIKEFVAELVSMGRLRHR 401
K + VIG G FG+V G L + +A+K K + KQ ++F++E MG+ H
Sbjct: 10 KIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQR-RDFLSEASIMGQFDHP 68
Query: 402 NLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHE 461
N++ L G + +++ ++M NGSLD L N Q ++RG+A+G+ YL
Sbjct: 69 NVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQN-DGQFTVIQLVGMLRGIAAGMKYLA- 126
Query: 462 DWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTI-PQTTKLVG---TFGYMDPE 517
+ +HR + N+L++++L K+ DFGL+R + DT P T +G + PE
Sbjct: 127 --DMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPE 184
Query: 518 LMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVD---------------- 560
++ K ++++DV+++G+ M EV S G RP + + +N ++
Sbjct: 185 AIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCPSALH 244
Query: 561 -WVCDCWKK 568
+ DCW+K
Sbjct: 245 QLMLDCWQK 253
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 126/267 (47%), Gaps = 22/267 (8%)
Query: 350 KDVIGRGGFGKVYRGVLAS-NVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRG 408
K +G G +G+VY GV ++ +AVK + D+ + ++EF+ E M ++H NLV+L G
Sbjct: 23 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 81
Query: 409 YCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVL 468
C R+ F ++ ++M G+L L + +N + ++S + YL ++ +
Sbjct: 82 VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFI 138
Query: 469 HRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTST 528
HRD+ N L+ + K+ DFGL+RL DT + PE + K S +
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 529 DVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASDSRLEGICEEKQ 587
DV+AFGV + E+A+ G P + L++ +D R EG C EK
Sbjct: 199 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-----------KDYRMERPEG-CPEKV 246
Query: 588 MELVLKLGLFCSHPKPEARPNMRQVMQ 614
EL+ C P RP+ ++ Q
Sbjct: 247 YELMRA----CWQWNPSDRPSFAEIHQ 269
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 126/267 (47%), Gaps = 22/267 (8%)
Query: 350 KDVIGRGGFGKVYRGVLAS-NVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRG 408
K +G G +G+VY GV ++ +AVK + D+ + ++EF+ E M ++H NLV+L G
Sbjct: 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 409 YCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVL 468
C R+ F ++ ++M G+L L + +N + ++S + YL ++ +
Sbjct: 77 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFI 133
Query: 469 HRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTST 528
HRD+ N L+ + K+ DFGL+RL DT + PE + K S +
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 529 DVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASDSRLEGICEEKQ 587
DV+AFGV + E+A+ G P + L++ +D R EG C EK
Sbjct: 194 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-----------KDYRMERPEG-CPEKV 241
Query: 588 MELVLKLGLFCSHPKPEARPNMRQVMQ 614
EL+ C P RP+ ++ Q
Sbjct: 242 YELMRA----CWQWNPSDRPSFAEIHQ 264
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 126/267 (47%), Gaps = 22/267 (8%)
Query: 350 KDVIGRGGFGKVYRGVLAS-NVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRG 408
K +G G +G+VY GV ++ +AVK + D+ + ++EF+ E M ++H NLV+L G
Sbjct: 22 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 80
Query: 409 YCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVL 468
C R+ F ++ ++M G+L L + +N + ++S + YL ++ +
Sbjct: 81 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFI 137
Query: 469 HRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTST 528
HRD+ N L+ + K+ DFGL+RL DT + PE + K S +
Sbjct: 138 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 197
Query: 529 DVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASDSRLEGICEEKQ 587
DV+AFGV + E+A+ G P + L++ +D R EG C EK
Sbjct: 198 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-----------KDYRMERPEG-CPEKV 245
Query: 588 MELVLKLGLFCSHPKPEARPNMRQVMQ 614
EL+ C P RP+ ++ Q
Sbjct: 246 YELMRA----CWQWNPSDRPSFAEIHQ 268
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 126/267 (47%), Gaps = 22/267 (8%)
Query: 350 KDVIGRGGFGKVYRGVLAS-NVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRG 408
K +G G +G+VY GV ++ +AVK + D+ + ++EF+ E M ++H NLV+L G
Sbjct: 19 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 77
Query: 409 YCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVL 468
C R+ F ++ ++M G+L L + +N + ++S + YL ++ +
Sbjct: 78 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFI 134
Query: 469 HRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTST 528
HRD+ N L+ + K+ DFGL+RL DT + PE + K S +
Sbjct: 135 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKS 194
Query: 529 DVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASDSRLEGICEEKQ 587
DV+AFGV + E+A+ G P + L++ +D R EG C EK
Sbjct: 195 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-----------KDYRMERPEG-CPEKV 242
Query: 588 MELVLKLGLFCSHPKPEARPNMRQVMQ 614
EL+ C P RP+ ++ Q
Sbjct: 243 YELMRA----CWQWNPSDRPSFAEIHQ 265
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 126/267 (47%), Gaps = 22/267 (8%)
Query: 350 KDVIGRGGFGKVYRGVLAS-NVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRG 408
K +G G +G+VY GV ++ +AVK + D+ + ++EF+ E M ++H NLV+L G
Sbjct: 23 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 81
Query: 409 YCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVL 468
C R+ F ++ ++M G+L L + +N + ++S + YL ++ +
Sbjct: 82 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFI 138
Query: 469 HRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTST 528
HRD+ N L+ + K+ DFGL+RL DT + PE + K S +
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 529 DVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASDSRLEGICEEKQ 587
DV+AFGV + E+A+ G P + L++ +D R EG C EK
Sbjct: 199 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-----------KDYRMERPEG-CPEKV 246
Query: 588 MELVLKLGLFCSHPKPEARPNMRQVMQ 614
EL+ C P RP+ ++ Q
Sbjct: 247 YELMRA----CWQWNPSDRPSFAEIHQ 269
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 126/267 (47%), Gaps = 22/267 (8%)
Query: 350 KDVIGRGGFGKVYRGVLAS-NVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRG 408
K +G G +G+VY GV ++ +AVK + D+ + ++EF+ E M ++H NLV+L G
Sbjct: 23 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 81
Query: 409 YCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVL 468
C R+ F ++ ++M G+L L + +N + ++S + YL ++ +
Sbjct: 82 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFI 138
Query: 469 HRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTST 528
HRD+ N L+ + K+ DFGL+RL DT + PE + K S +
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 529 DVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASDSRLEGICEEKQ 587
DV+AFGV + E+A+ G P + L++ +D R EG C EK
Sbjct: 199 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-----------KDYRMERPEG-CPEKV 246
Query: 588 MELVLKLGLFCSHPKPEARPNMRQVMQ 614
EL+ C P RP+ ++ Q
Sbjct: 247 YELMRA----CWQWNPSDRPSFAEIHQ 269
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 126/267 (47%), Gaps = 22/267 (8%)
Query: 350 KDVIGRGGFGKVYRGVLAS-NVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRG 408
K +G G +G+VY GV ++ +AVK + D+ + ++EF+ E M ++H NLV+L G
Sbjct: 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 409 YCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVL 468
C R+ F ++ ++M G+L L + +N + ++S + YL ++ +
Sbjct: 77 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFI 133
Query: 469 HRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTST 528
HRD+ N L+ + K+ DFGL+RL DT + PE + K S +
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 529 DVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASDSRLEGICEEKQ 587
DV+AFGV + E+A+ G P + L++ +D R EG C EK
Sbjct: 194 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-----------KDYRMERPEG-CPEKV 241
Query: 588 MELVLKLGLFCSHPKPEARPNMRQVMQ 614
EL+ C P RP+ ++ Q
Sbjct: 242 YELMRA----CWQWNPSDRPSFAEIHQ 264
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 126/267 (47%), Gaps = 22/267 (8%)
Query: 350 KDVIGRGGFGKVYRGVLAS-NVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRG 408
K +G G +G+VY GV ++ +AVK + D+ + ++EF+ E M ++H NLV+L G
Sbjct: 20 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 78
Query: 409 YCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVL 468
C R+ F ++ ++M G+L L + +N + ++S + YL ++ +
Sbjct: 79 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFI 135
Query: 469 HRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTST 528
HRD+ N L+ + K+ DFGL+RL DT + PE + K S +
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 529 DVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASDSRLEGICEEKQ 587
DV+AFGV + E+A+ G P + L++ +D R EG C EK
Sbjct: 196 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-----------KDYRMERPEG-CPEKV 243
Query: 588 MELVLKLGLFCSHPKPEARPNMRQVMQ 614
EL+ C P RP+ ++ Q
Sbjct: 244 YELMRA----CWQWNPSDRPSFAEIHQ 266
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 126/267 (47%), Gaps = 22/267 (8%)
Query: 350 KDVIGRGGFGKVYRGVLAS-NVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRG 408
K +G G +G+VY GV ++ +AVK + D+ + ++EF+ E M ++H NLV+L G
Sbjct: 19 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 77
Query: 409 YCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVL 468
C R+ F ++ ++M G+L L + +N + ++S + YL ++ +
Sbjct: 78 VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFI 134
Query: 469 HRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTST 528
HRD+ N L+ + K+ DFGL+RL DT + PE + K S +
Sbjct: 135 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 194
Query: 529 DVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASDSRLEGICEEKQ 587
DV+AFGV + E+A+ G P + L++ +D R EG C EK
Sbjct: 195 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-----------KDYRMERPEG-CPEKV 242
Query: 588 MELVLKLGLFCSHPKPEARPNMRQVMQ 614
EL+ C P RP+ ++ Q
Sbjct: 243 YELMRA----CWQWNPSDRPSFAEIHQ 265
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 126/267 (47%), Gaps = 22/267 (8%)
Query: 350 KDVIGRGGFGKVYRGVLAS-NVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRG 408
K +G G +G+VY GV ++ +AVK + D+ + ++EF+ E M ++H NLV+L G
Sbjct: 31 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 89
Query: 409 YCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVL 468
C R+ F ++ ++M G+L L + +N + ++S + YL ++ +
Sbjct: 90 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFI 146
Query: 469 HRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTST 528
HRD+ N L+ + K+ DFGL+RL DT + PE + K S +
Sbjct: 147 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 206
Query: 529 DVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASDSRLEGICEEKQ 587
DV+AFGV + E+A+ G P + L++ +D R EG C EK
Sbjct: 207 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-----------KDYRMERPEG-CPEKV 254
Query: 588 MELVLKLGLFCSHPKPEARPNMRQVMQ 614
EL+ C P RP+ ++ Q
Sbjct: 255 YELMRA----CWQWNPSDRPSFAEIHQ 277
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 126/267 (47%), Gaps = 22/267 (8%)
Query: 350 KDVIGRGGFGKVYRGVLAS-NVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRG 408
K +G G +G+VY GV ++ +AVK + D+ + ++EF+ E M ++H NLV+L G
Sbjct: 20 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 78
Query: 409 YCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVL 468
C R+ F ++ ++M G+L L + +N + ++S + YL ++ +
Sbjct: 79 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFI 135
Query: 469 HRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTST 528
HRD+ N L+ + K+ DFGL+RL DT + PE + K S +
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 529 DVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASDSRLEGICEEKQ 587
DV+AFGV + E+A+ G P + L++ +D R EG C EK
Sbjct: 196 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-----------KDYRMERPEG-CPEKV 243
Query: 588 MELVLKLGLFCSHPKPEARPNMRQVMQ 614
EL+ C P RP+ ++ Q
Sbjct: 244 YELMRA----CWQWNPSDRPSFAEIHQ 266
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 126/267 (47%), Gaps = 22/267 (8%)
Query: 350 KDVIGRGGFGKVYRGVLAS-NVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRG 408
K +G G +G+VY GV ++ +AVK + D+ + ++EF+ E M ++H NLV+L G
Sbjct: 20 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 78
Query: 409 YCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVL 468
C R+ F ++ ++M G+L L + +N + ++S + YL ++ +
Sbjct: 79 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFI 135
Query: 469 HRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTST 528
HRD+ N L+ + K+ DFGL+RL DT + PE + K S +
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 529 DVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASDSRLEGICEEKQ 587
DV+AFGV + E+A+ G P + L++ +D R EG C EK
Sbjct: 196 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-----------KDYRMERPEG-CPEKV 243
Query: 588 MELVLKLGLFCSHPKPEARPNMRQVMQ 614
EL+ C P RP+ ++ Q
Sbjct: 244 YELMRA----CWQWNPSDRPSFAEIHQ 266
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 126/267 (47%), Gaps = 22/267 (8%)
Query: 350 KDVIGRGGFGKVYRGVLAS-NVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRG 408
K +G G FG+VY GV ++ +AVK + D+ + ++EF+ E M ++H NLV+L G
Sbjct: 16 KHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 74
Query: 409 YCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVL 468
C R+ F ++ ++M G+L L + ++ + ++S + YL ++ +
Sbjct: 75 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFI 131
Query: 469 HRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTST 528
HRD+ N L+ + K+ DFGL+RL DT + PE + K S +
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 191
Query: 529 DVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASDSRLEGICEEKQ 587
DV+AFGV + E+A+ G P + L++ +D R EG C EK
Sbjct: 192 DVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE-----------KDYRMERPEG-CPEKV 239
Query: 588 MELVLKLGLFCSHPKPEARPNMRQVMQ 614
EL+ C P RP+ ++ Q
Sbjct: 240 YELMRA----CWQWNPSDRPSFAEIHQ 262
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 126/267 (47%), Gaps = 22/267 (8%)
Query: 350 KDVIGRGGFGKVYRGVLAS-NVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRG 408
K +G G +G+VY GV ++ +AVK + D+ + ++EF+ E M ++H NLV+L G
Sbjct: 23 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 81
Query: 409 YCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVL 468
C R+ F ++ ++M G+L L + +N + ++S + YL ++ +
Sbjct: 82 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFI 138
Query: 469 HRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTST 528
HRD+ N L+ + K+ DFGL+RL DT + PE + K S +
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 529 DVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASDSRLEGICEEKQ 587
DV+AFGV + E+A+ G P + L++ +D R EG C EK
Sbjct: 199 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-----------KDYRMERPEG-CPEKV 246
Query: 588 MELVLKLGLFCSHPKPEARPNMRQVMQ 614
EL+ C P RP+ ++ Q
Sbjct: 247 YELMRA----CWQWNPSDRPSFAEIHQ 269
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 126/267 (47%), Gaps = 22/267 (8%)
Query: 350 KDVIGRGGFGKVYRGVLAS-NVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRG 408
K +G G +G+VY GV ++ +AVK + D+ + ++EF+ E M ++H NLV+L G
Sbjct: 16 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 74
Query: 409 YCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVL 468
C R+ F ++ ++M G+L L + ++ + ++S + YL ++ +
Sbjct: 75 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFI 131
Query: 469 HRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTST 528
HRD+ N L+ + K+ DFGL+RL DT + PE + K S +
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKS 191
Query: 529 DVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASDSRLEGICEEKQ 587
DV+AFGV + E+A+ G P + L++ +D R EG C EK
Sbjct: 192 DVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE-----------KDYRMERPEG-CPEKV 239
Query: 588 MELVLKLGLFCSHPKPEARPNMRQVMQ 614
EL+ C P RP+ ++ Q
Sbjct: 240 YELMRA----CWQWNPSDRPSFAEIHQ 262
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 126/267 (47%), Gaps = 22/267 (8%)
Query: 350 KDVIGRGGFGKVYRGVLAS-NVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRG 408
K +G G +G+VY GV ++ +AVK + D+ + ++EF+ E M ++H NLV+L G
Sbjct: 16 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 74
Query: 409 YCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVL 468
C R+ F ++ ++M G+L L + ++ + ++S + YL ++ +
Sbjct: 75 VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFI 131
Query: 469 HRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTST 528
HRD+ N L+ + K+ DFGL+RL DT + PE + K S +
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 191
Query: 529 DVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASDSRLEGICEEKQ 587
DV+AFGV + E+A+ G P + L++ +D R EG C EK
Sbjct: 192 DVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE-----------KDYRMERPEG-CPEKV 239
Query: 588 MELVLKLGLFCSHPKPEARPNMRQVMQ 614
EL+ C P RP+ ++ Q
Sbjct: 240 YELMRA----CWQWNPSDRPSFAEIHQ 262
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 126/267 (47%), Gaps = 22/267 (8%)
Query: 350 KDVIGRGGFGKVYRGVLAS-NVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRG 408
K +G G +G+VY GV ++ +AVK + D+ + ++EF+ E M ++H NLV+L G
Sbjct: 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 409 YCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVL 468
C R+ F ++ ++M G+L L + ++ + ++S + YL ++ +
Sbjct: 77 VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFI 133
Query: 469 HRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTST 528
HRD+ N L+ + K+ DFGL+RL DT + PE + K S +
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 529 DVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASDSRLEGICEEKQ 587
DV+AFGV + E+A+ G P + L++ +D R EG C EK
Sbjct: 194 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-----------KDYRMERPEG-CPEKV 241
Query: 588 MELVLKLGLFCSHPKPEARPNMRQVMQ 614
EL+ C P RP+ ++ Q
Sbjct: 242 YELMRA----CWQWNPSDRPSFAEIHQ 264
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 126/267 (47%), Gaps = 22/267 (8%)
Query: 350 KDVIGRGGFGKVYRGVLAS-NVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRG 408
K +G G +G+VY GV ++ +AVK + D+ + ++EF+ E M ++H NLV+L G
Sbjct: 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 409 YCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVL 468
C R+ F ++ ++M G+L L + ++ + ++S + YL ++ +
Sbjct: 77 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFI 133
Query: 469 HRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTST 528
HRD+ N L+ + K+ DFGL+RL DT + PE + K S +
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 529 DVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASDSRLEGICEEKQ 587
DV+AFGV + E+A+ G P + L++ +D R EG C EK
Sbjct: 194 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-----------KDYRMERPEG-CPEKV 241
Query: 588 MELVLKLGLFCSHPKPEARPNMRQVMQ 614
EL+ C P RP+ ++ Q
Sbjct: 242 YELMRA----CWQWNPSDRPSFAEIHQ 264
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 134/277 (48%), Gaps = 40/277 (14%)
Query: 327 EREYGPQRFTYKDLYKATKGFKDK---------DVIGRGGFGKVYRGVL----ASNVQIA 373
E ++ + TY++ +A + F + +IG G G+V G L +V +A
Sbjct: 22 EPQFYAEPHTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVA 81
Query: 374 VK--KVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKI 431
+K K + +Q ++F++E MG+ H N+++L G R ++V +YM NGSLD
Sbjct: 82 IKALKAGYTERQR-RDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTF 140
Query: 432 LHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFG 491
L T+ Q ++RGV +G+ YL + +HRD+ NVL+D++L K+ DFG
Sbjct: 141 LRTH-DGQFTIMQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFG 196
Query: 492 LARLYDHDTIPQTTKLVGTFG--YMDPELMRTGKASTSTDVYAFGVFMLEV-ASGRRPVE 548
L+R+ + D T G + PE + S+++DV++FGV M EV A G RP
Sbjct: 197 LSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYW 256
Query: 549 QQGSMETVNLVD-----------------WVCDCWKK 568
+ + ++ V+ + DCW K
Sbjct: 257 NMTNRDVISSVEEGYRLPAPMGCPHALHQLMLDCWHK 293
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 126/267 (47%), Gaps = 22/267 (8%)
Query: 350 KDVIGRGGFGKVYRGVLAS-NVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRG 408
K +G G +G+VY GV ++ +AVK + D+ + ++EF+ E M ++H NLV+L G
Sbjct: 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 409 YCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVL 468
C R+ F ++ ++M G+L L + ++ + ++S + YL ++ +
Sbjct: 77 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFI 133
Query: 469 HRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTST 528
HRD+ N L+ + K+ DFGL+RL DT + PE + K S +
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 529 DVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASDSRLEGICEEKQ 587
DV+AFGV + E+A+ G P + L++ +D R EG C EK
Sbjct: 194 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-----------KDYRMERPEG-CPEKV 241
Query: 588 MELVLKLGLFCSHPKPEARPNMRQVMQ 614
EL+ C P RP+ ++ Q
Sbjct: 242 YELMRA----CWQWNPSDRPSFAEIHQ 264
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 126/267 (47%), Gaps = 22/267 (8%)
Query: 350 KDVIGRGGFGKVYRGVLAS-NVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRG 408
K +G G +G+VY GV ++ +AVK + D+ + ++EF+ E M ++H NLV+L G
Sbjct: 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 409 YCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVL 468
C R+ F ++ ++M G+L L + ++ + ++S + YL ++ +
Sbjct: 77 VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFI 133
Query: 469 HRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTST 528
HRD+ N L+ + K+ DFGL+RL DT + PE + K S +
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 529 DVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASDSRLEGICEEKQ 587
DV+AFGV + E+A+ G P + L++ +D R EG C EK
Sbjct: 194 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-----------KDYRMERPEG-CPEKV 241
Query: 588 MELVLKLGLFCSHPKPEARPNMRQVMQ 614
EL+ C P RP+ ++ Q
Sbjct: 242 YELMRA----CWQWNPSDRPSFAEIHQ 264
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 126/267 (47%), Gaps = 22/267 (8%)
Query: 350 KDVIGRGGFGKVYRGVLAS-NVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRG 408
K +G G +G+VY GV ++ +AVK + D+ + ++EF+ E M ++H NLV+L G
Sbjct: 222 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 280
Query: 409 YCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVL 468
C R+ F ++ ++M G+L L + +N + ++S + YL ++ +
Sbjct: 281 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFI 337
Query: 469 HRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTST 528
HR++ N L+ + K+ DFGL+RL DT + PE + K S +
Sbjct: 338 HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 397
Query: 529 DVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASDSRLEGICEEKQ 587
DV+AFGV + E+A+ G P + L++ +D R EG C EK
Sbjct: 398 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-----------KDYRMERPEG-CPEKV 445
Query: 588 MELVLKLGLFCSHPKPEARPNMRQVMQ 614
EL+ C P RP+ ++ Q
Sbjct: 446 YELMRA----CWQWNPSDRPSFAEIHQ 468
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 122/248 (49%), Gaps = 31/248 (12%)
Query: 347 FKDKDVIGRGGFGKVYRGVLA----SNVQIAVK--KVSHDSKQGIKEFVAELVSMGRLRH 400
K + VIG G FG+V G L + +A+K K + KQ ++F++E MG+ H
Sbjct: 16 IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQR-RDFLSEASIMGQFDH 74
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLH 460
N++ L G + +++ +YM NGSLD L N Q ++RG+ SG+ YL
Sbjct: 75 PNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKN-DGRFTVIQLVGMLRGIGSGMKYLS 133
Query: 461 EDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFG--YMDPEL 518
+ +HRD+ N+L++++L K+ DFG++R+ + D T G + PE
Sbjct: 134 ---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEA 190
Query: 519 MRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVD----------------- 560
+ K ++++DV+++G+ M EV S G RP + + + ++
Sbjct: 191 IAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPPMDCPIALHQ 250
Query: 561 WVCDCWKK 568
+ DCW+K
Sbjct: 251 LMLDCWQK 258
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 126/267 (47%), Gaps = 22/267 (8%)
Query: 350 KDVIGRGGFGKVYRGVLAS-NVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRG 408
K +G G +G+VY GV ++ +AVK + D+ + ++EF+ E M ++H NLV+L G
Sbjct: 264 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 322
Query: 409 YCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVL 468
C R+ F ++ ++M G+L L + +N + ++S + YL ++ +
Sbjct: 323 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFI 379
Query: 469 HRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTST 528
HR++ N L+ + K+ DFGL+RL DT + PE + K S +
Sbjct: 380 HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 439
Query: 529 DVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASDSRLEGICEEKQ 587
DV+AFGV + E+A+ G P + L++ +D R EG C EK
Sbjct: 440 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-----------KDYRMERPEG-CPEKV 487
Query: 588 MELVLKLGLFCSHPKPEARPNMRQVMQ 614
EL+ C P RP+ ++ Q
Sbjct: 488 YELMRA----CWQWNPSDRPSFAEIHQ 510
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 126/267 (47%), Gaps = 22/267 (8%)
Query: 350 KDVIGRGGFGKVYRGVLAS-NVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRG 408
K +G G +G+VY GV ++ +AVK + D+ + ++EF+ E M ++H NLV+L G
Sbjct: 23 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 81
Query: 409 YCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVL 468
C R+ F ++ ++M G+L L + ++ + ++S + YL ++ +
Sbjct: 82 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFI 138
Query: 469 HRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTST 528
HRD+ N L+ + K+ DFGL+RL DT + PE + K S +
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 529 DVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASDSRLEGICEEKQ 587
DV+AFGV + E+A+ G P + L++ +D R EG C EK
Sbjct: 199 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-----------KDYRMERPEG-CPEKV 246
Query: 588 MELVLKLGLFCSHPKPEARPNMRQVMQ 614
EL+ C P RP+ ++ Q
Sbjct: 247 YELMRA----CWQWNPSDRPSFAEIHQ 269
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 134/277 (48%), Gaps = 40/277 (14%)
Query: 327 EREYGPQRFTYKDLYKATKGFKDK---------DVIGRGGFGKVYRGVL----ASNVQIA 373
E ++ + TY++ +A + F + +IG G G+V G L +V +A
Sbjct: 22 EPQFYAEPHTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVA 81
Query: 374 VK--KVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKI 431
+K K + +Q ++F++E MG+ H N+++L G R ++V +YM NGSLD
Sbjct: 82 IKALKAGYTERQR-RDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTF 140
Query: 432 LHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFG 491
L T+ Q ++RGV +G+ YL + +HRD+ NVL+D++L K+ DFG
Sbjct: 141 LRTH-DGQFTIMQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFG 196
Query: 492 LARLYDHDTIPQTTKLVGTFG--YMDPELMRTGKASTSTDVYAFGVFMLEV-ASGRRPVE 548
L+R+ + D T G + PE + S+++DV++FGV M EV A G RP
Sbjct: 197 LSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYW 256
Query: 549 QQGSMETVNLVD-----------------WVCDCWKK 568
+ + ++ V+ + DCW K
Sbjct: 257 NMTNRDVISSVEEGYRLPAPMGCPHALHQLMLDCWHK 293
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 122/248 (49%), Gaps = 31/248 (12%)
Query: 347 FKDKDVIGRGGFGKVYRGVLA----SNVQIAVK--KVSHDSKQGIKEFVAELVSMGRLRH 400
K + VIG G FG+V G L + +A+K K + KQ ++F++E MG+ H
Sbjct: 10 IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQR-RDFLSEASIMGQFDH 68
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLH 460
N++ L G + +++ +YM NGSLD L N Q ++RG+ SG+ YL
Sbjct: 69 PNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKN-DGRFTVIQLVGMLRGIGSGMKYLS 127
Query: 461 EDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFG--YMDPEL 518
+ +HRD+ N+L++++L K+ DFG++R+ + D T G + PE
Sbjct: 128 ---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEA 184
Query: 519 MRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVD----------------- 560
+ K ++++DV+++G+ M EV S G RP + + + ++
Sbjct: 185 IAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPPMDCPIALHQ 244
Query: 561 WVCDCWKK 568
+ DCW+K
Sbjct: 245 LMLDCWQK 252
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 104/209 (49%), Gaps = 11/209 (5%)
Query: 345 KGFKDKDVIGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLV 404
K + ++V+GRG FG V + + +A+K++ +S++ K F+ EL + R+ H N+V
Sbjct: 8 KEIEVEEVVGRGAFGVVCKAKWRAK-DVAIKQIESESER--KAFIVELRQLSRVNHPNIV 64
Query: 405 KLRGYCRRKGEFLLVYDYMPNGSLDKILH-TNIKPCLNWYQRFRIIRGVASGLLYLHEDW 463
KL G C LV +Y GSL +LH P + G+ YLH
Sbjct: 65 KLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQ 122
Query: 464 EQVVLHRDIKPANVLLDADLNG-KLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTG 522
+ ++HRD+KP N+LL A K+ DFG A D T G+ +M PE+
Sbjct: 123 PKALIHRDLKPPNLLLVAGGTVLKICDFGTA----CDIQTHMTNNKGSAAWMAPEVFEGS 178
Query: 523 KASTSTDVYAFGVFMLEVASGRRPVEQQG 551
S DV+++G+ + EV + R+P ++ G
Sbjct: 179 NYSEKCDVFSWGIILWEVITRRKPFDEIG 207
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 104/209 (49%), Gaps = 11/209 (5%)
Query: 345 KGFKDKDVIGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLV 404
K + ++V+GRG FG V + + +A+K++ +S++ K F+ EL + R+ H N+V
Sbjct: 9 KEIEVEEVVGRGAFGVVCKAKWRAK-DVAIKQIESESER--KAFIVELRQLSRVNHPNIV 65
Query: 405 KLRGYCRRKGEFLLVYDYMPNGSLDKILH-TNIKPCLNWYQRFRIIRGVASGLLYLHEDW 463
KL G C LV +Y GSL +LH P + G+ YLH
Sbjct: 66 KLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQ 123
Query: 464 EQVVLHRDIKPANVLLDADLNG-KLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTG 522
+ ++HRD+KP N+LL A K+ DFG A D T G+ +M PE+
Sbjct: 124 PKALIHRDLKPPNLLLVAGGTVLKICDFGTA----CDIQTHMTNNKGSAAWMAPEVFEGS 179
Query: 523 KASTSTDVYAFGVFMLEVASGRRPVEQQG 551
S DV+++G+ + EV + R+P ++ G
Sbjct: 180 NYSEKCDVFSWGIILWEVITRRKPFDEIG 208
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 126/267 (47%), Gaps = 22/267 (8%)
Query: 350 KDVIGRGGFGKVYRGVLAS-NVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRG 408
K +G G +G+VY GV ++ +AVK + D+ + ++EF+ E M ++H NLV+L G
Sbjct: 225 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 283
Query: 409 YCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVL 468
C R+ F ++ ++M G+L L + ++ + ++S + YL ++ +
Sbjct: 284 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFI 340
Query: 469 HRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTST 528
HR++ N L+ + K+ DFGL+RL DT + PE + K S +
Sbjct: 341 HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 400
Query: 529 DVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASDSRLEGICEEKQ 587
DV+AFGV + E+A+ G P + L++ +D R EG C EK
Sbjct: 401 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-----------KDYRMERPEG-CPEKV 448
Query: 588 MELVLKLGLFCSHPKPEARPNMRQVMQ 614
EL+ C P RP+ ++ Q
Sbjct: 449 YELMRA----CWQWNPSDRPSFAEIHQ 471
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 101/198 (51%), Gaps = 9/198 (4%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCRR 412
IG G FG VY+G +V + + V+ + Q ++ F E+ + + RH N++ GY
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 79
Query: 413 KGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDI 472
K + +V + SL LH I+ + I R A G+ YLH + ++HRD+
Sbjct: 80 KPQLAIVTQWCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDL 135
Query: 473 KPANVLLDADLNGKLGDFGLARLYDH-DTIPQTTKLVGTFGYMDPELMRTGKA---STST 528
K N+ L DL K+GDFGLA + Q +L G+ +M PE++R S +
Sbjct: 136 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 195
Query: 529 DVYAFGVFMLEVASGRRP 546
DVYAFG+ + E+ +G+ P
Sbjct: 196 DVYAFGIVLYELMTGQLP 213
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 101/198 (51%), Gaps = 9/198 (4%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCRR 412
IG G FG VY+G +V + + V+ + Q ++ F E+ + + RH N++ GY
Sbjct: 18 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 76
Query: 413 KGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDI 472
K + +V + SL LH I+ + I R A G+ YLH + ++HRD+
Sbjct: 77 KPQLAIVTQWCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDL 132
Query: 473 KPANVLLDADLNGKLGDFGLARLYDH-DTIPQTTKLVGTFGYMDPELMRTGKA---STST 528
K N+ L DL K+GDFGLA + Q +L G+ +M PE++R S +
Sbjct: 133 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 192
Query: 529 DVYAFGVFMLEVASGRRP 546
DVYAFG+ + E+ +G+ P
Sbjct: 193 DVYAFGIVLYELMTGQLP 210
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 101/198 (51%), Gaps = 9/198 (4%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCRR 412
IG G FG VY+G +V + + V+ + Q ++ F E+ + + RH N++ GY
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 74
Query: 413 KGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDI 472
K + +V + SL LH I+ + I R A G+ YLH + ++HRD+
Sbjct: 75 KPQLAIVTQWCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDL 130
Query: 473 KPANVLLDADLNGKLGDFGLARLYDH-DTIPQTTKLVGTFGYMDPELMRT---GKASTST 528
K N+ L DL K+GDFGLA + Q +L G+ +M PE++R S +
Sbjct: 131 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 190
Query: 529 DVYAFGVFMLEVASGRRP 546
DVYAFG+ + E+ +G+ P
Sbjct: 191 DVYAFGIVLYELMTGQLP 208
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 101/198 (51%), Gaps = 9/198 (4%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCRR 412
IG G FG VY+G +V + + V+ + Q ++ F E+ + + RH N++ GY
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 79
Query: 413 KGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDI 472
K + +V + SL LH I+ + I R A G+ YLH + ++HRD+
Sbjct: 80 KPQLAIVTQWCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDL 135
Query: 473 KPANVLLDADLNGKLGDFGLARLYDH-DTIPQTTKLVGTFGYMDPELMRT---GKASTST 528
K N+ L DL K+GDFGLA + Q +L G+ +M PE++R S +
Sbjct: 136 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 195
Query: 529 DVYAFGVFMLEVASGRRP 546
DVYAFG+ + E+ +G+ P
Sbjct: 196 DVYAFGIVLYELMTGQLP 213
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 101/198 (51%), Gaps = 9/198 (4%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCRR 412
IG G FG VY+G +V + + V+ + Q ++ F E+ + + RH N++ GY
Sbjct: 43 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 101
Query: 413 KGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDI 472
K + +V + SL LH I+ + I R A G+ YLH + ++HRD+
Sbjct: 102 KPQLAIVTQWCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDL 157
Query: 473 KPANVLLDADLNGKLGDFGLARLYDH-DTIPQTTKLVGTFGYMDPELMRTGKA---STST 528
K N+ L DL K+GDFGLA + Q +L G+ +M PE++R S +
Sbjct: 158 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 217
Query: 529 DVYAFGVFMLEVASGRRP 546
DVYAFG+ + E+ +G+ P
Sbjct: 218 DVYAFGIVLYELMTGQLP 235
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 101/198 (51%), Gaps = 9/198 (4%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCRR 412
IG G FG VY+G +V + + V+ + Q ++ F E+ + + RH N++ GY
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 102
Query: 413 KGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDI 472
K + +V + SL LH I+ + I R A G+ YLH + ++HRD+
Sbjct: 103 KPQLAIVTQWCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDL 158
Query: 473 KPANVLLDADLNGKLGDFGLARLYDH-DTIPQTTKLVGTFGYMDPELMRTGKA---STST 528
K N+ L DL K+GDFGLA + Q +L G+ +M PE++R S +
Sbjct: 159 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 218
Query: 529 DVYAFGVFMLEVASGRRP 546
DVYAFG+ + E+ +G+ P
Sbjct: 219 DVYAFGIVLYELMTGQLP 236
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 128/265 (48%), Gaps = 20/265 (7%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCRR 412
IG G FG VY+G +V + + V+ + Q ++ F E+ + + RH N++ GY
Sbjct: 20 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-T 78
Query: 413 KGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDI 472
K + +V + SL LH + + + I R A G+ YLH + ++HRD+
Sbjct: 79 KPQLAIVTQWCEGSSLYHHLHAS-ETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDL 134
Query: 473 KPANVLLDADLNGKLGDFGLARLYDH-DTIPQTTKLVGTFGYMDPELMR---TGKASTST 528
K N+ L D K+GDFGLA + Q +L G+ +M PE++R + S +
Sbjct: 135 KSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQS 194
Query: 529 DVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASDSRLEGICEEKQM 588
DVYAFG+ + E+ +G+ P +N D + + +G++ S++ C ++
Sbjct: 195 DVYAFGIVLYELMTGQLPY------SNINNRDQIIEMVGRGSL-SPDLSKVRSNCPKRMK 247
Query: 589 ELVLKLGLFCSHPKPEARPNMRQVM 613
L+ + C K + RP+ +++
Sbjct: 248 RLMAE----CLKKKRDERPSFPRIL 268
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 100/198 (50%), Gaps = 9/198 (4%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCRR 412
IG G FG VY+G +V + + V+ + Q ++ F E+ + + RH N++ GY
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 74
Query: 413 KGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDI 472
K + +V + SL LH I+ + I R A G+ YLH + ++HRD+
Sbjct: 75 KPQLAIVTQWCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDL 130
Query: 473 KPANVLLDADLNGKLGDFGLARLYDH-DTIPQTTKLVGTFGYMDPELMRT---GKASTST 528
K N+ L DL K+GDFGLA Q +L G+ +M PE++R S +
Sbjct: 131 KSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 190
Query: 529 DVYAFGVFMLEVASGRRP 546
DVYAFG+ + E+ +G+ P
Sbjct: 191 DVYAFGIVLYELMTGQLP 208
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 127/273 (46%), Gaps = 30/273 (10%)
Query: 351 DVIGRGGFGKVYRGVLASN----VQIAVKKVSHDSKQG-IKEFVAELVSMGRLRHRNLVK 405
+VIGRG FG VY G L N + AVK ++ + G + +F+ E + M H N++
Sbjct: 95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 154
Query: 406 LRGYC-RRKGEFLLVYDYMPNGSLDKILHTNI-KPCLNWYQRFRIIRGVASGLLYLHEDW 463
L G C R +G L+V YM +G L + P + F + VA G+ +L
Sbjct: 155 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKFLAS-- 210
Query: 464 EQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDH--DTIPQTTKLVGTFGYMDPELMR 520
+ +HRD+ N +LD K+ DFGLAR +YD D++ T +M E ++
Sbjct: 211 -KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 269
Query: 521 TGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASDSRLE 580
T K +T +DV++FGV + E+ + P VN D + +
Sbjct: 270 TQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRLLQPE----- 319
Query: 581 GICEEKQMELVLKLGLFCSHPKPEARPNMRQVM 613
C + E++LK C HPK E RP+ +++
Sbjct: 320 -YCPDPLYEVMLK----CWHPKAEMRPSFSELV 347
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 127/273 (46%), Gaps = 30/273 (10%)
Query: 351 DVIGRGGFGKVYRGVLASN----VQIAVKKVSHDSKQG-IKEFVAELVSMGRLRHRNLVK 405
+VIGRG FG VY G L N + AVK ++ + G + +F+ E + M H N++
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 406 LRGYC-RRKGEFLLVYDYMPNGSLDKILHTNI-KPCLNWYQRFRIIRGVASGLLYLHEDW 463
L G C R +G L+V YM +G L + P + F + VA G+ +L
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKFLAS-- 149
Query: 464 EQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDH--DTIPQTTKLVGTFGYMDPELMR 520
+ +HRD+ N +LD K+ DFGLAR +YD D++ T +M E ++
Sbjct: 150 -KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 208
Query: 521 TGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASDSRLE 580
T K +T +DV++FGV + E+ + P VN D + +
Sbjct: 209 TQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRLLQPE----- 258
Query: 581 GICEEKQMELVLKLGLFCSHPKPEARPNMRQVM 613
C + E++LK C HPK E RP+ +++
Sbjct: 259 -YCPDPLYEVMLK----CWHPKAEMRPSFSELV 286
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 127/273 (46%), Gaps = 30/273 (10%)
Query: 351 DVIGRGGFGKVYRGVLASN----VQIAVKKVSHDSKQG-IKEFVAELVSMGRLRHRNLVK 405
+VIGRG FG VY G L N + AVK ++ + G + +F+ E + M H N++
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 96
Query: 406 LRGYC-RRKGEFLLVYDYMPNGSLDKILHTNI-KPCLNWYQRFRIIRGVASGLLYLHEDW 463
L G C R +G L+V YM +G L + P + F + VA G+ +L
Sbjct: 97 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKFLAS-- 152
Query: 464 EQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDH--DTIPQTTKLVGTFGYMDPELMR 520
+ +HRD+ N +LD K+ DFGLAR +YD D++ T +M E ++
Sbjct: 153 -KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 211
Query: 521 TGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASDSRLE 580
T K +T +DV++FGV + E+ + P VN D + +
Sbjct: 212 TQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRLLQPE----- 261
Query: 581 GICEEKQMELVLKLGLFCSHPKPEARPNMRQVM 613
C + E++LK C HPK E RP+ +++
Sbjct: 262 -YCPDPLYEVMLK----CWHPKAEMRPSFSELV 289
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 100/198 (50%), Gaps = 9/198 (4%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCRR 412
IG G FG VY+G +V + + V+ + Q ++ F E+ + + RH N++ GY
Sbjct: 36 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 94
Query: 413 KGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDI 472
K + +V + SL LH I+ + I R A G+ YLH + ++HRD+
Sbjct: 95 KPQLAIVTQWCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDL 150
Query: 473 KPANVLLDADLNGKLGDFGLARLYDH-DTIPQTTKLVGTFGYMDPELMRTGKA---STST 528
K N+ L DL K+GDFGLA Q +L G+ +M PE++R S +
Sbjct: 151 KSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 210
Query: 529 DVYAFGVFMLEVASGRRP 546
DVYAFG+ + E+ +G+ P
Sbjct: 211 DVYAFGIVLYELMTGQLP 228
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 127/273 (46%), Gaps = 30/273 (10%)
Query: 351 DVIGRGGFGKVYRGVLASN----VQIAVKKVSHDSKQG-IKEFVAELVSMGRLRHRNLVK 405
+VIGRG FG VY G L N + AVK ++ + G + +F+ E + M H N++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 406 LRGYC-RRKGEFLLVYDYMPNGSLDKILHTNI-KPCLNWYQRFRIIRGVASGLLYLHEDW 463
L G C R +G L+V YM +G L + P + F + VA G+ YL
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYLAS-- 151
Query: 464 EQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDHD--TIPQTTKLVGTFGYMDPELMR 520
+ +HRD+ N +LD K+ DFGLAR +YD + ++ T +M E ++
Sbjct: 152 -KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 210
Query: 521 TGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASDSRLE 580
T K +T +DV++FGV + E+ + P VN D + +
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRLLQPE----- 260
Query: 581 GICEEKQMELVLKLGLFCSHPKPEARPNMRQVM 613
C + E++LK C HPK E RP+ +++
Sbjct: 261 -YCPDPLYEVMLK----CWHPKAEMRPSFSELV 288
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 127/273 (46%), Gaps = 30/273 (10%)
Query: 351 DVIGRGGFGKVYRGVLASN----VQIAVKKVSHDSKQG-IKEFVAELVSMGRLRHRNLVK 405
+VIGRG FG VY G L N + AVK ++ + G + +F+ E + M H N++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 406 LRGYC-RRKGEFLLVYDYMPNGSLDKILHTNI-KPCLNWYQRFRIIRGVASGLLYLHEDW 463
L G C R +G L+V YM +G L + P + F + VA G+ +L
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKFLAS-- 151
Query: 464 EQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDH--DTIPQTTKLVGTFGYMDPELMR 520
+ +HRD+ N +LD K+ DFGLAR +YD D++ T +M E ++
Sbjct: 152 -KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 210
Query: 521 TGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASDSRLE 580
T K +T +DV++FGV + E+ + P VN D + +
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRLLQPE----- 260
Query: 581 GICEEKQMELVLKLGLFCSHPKPEARPNMRQVM 613
C + E++LK C HPK E RP+ +++
Sbjct: 261 -YCPDPLYEVMLK----CWHPKAEMRPSFSELV 288
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 100/198 (50%), Gaps = 9/198 (4%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCRR 412
IG G FG VY+G +V + + V+ + Q ++ F E+ + + RH N++ GY
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 75
Query: 413 KGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDI 472
+ +V + SL LH I+ + I R A G+ YLH + ++HRD+
Sbjct: 76 P-QLAIVTQWCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDL 130
Query: 473 KPANVLLDADLNGKLGDFGLARLYDH-DTIPQTTKLVGTFGYMDPELMRT---GKASTST 528
K N+ L DL K+GDFGLA + Q +L G+ +M PE++R S +
Sbjct: 131 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 190
Query: 529 DVYAFGVFMLEVASGRRP 546
DVYAFG+ + E+ +G+ P
Sbjct: 191 DVYAFGIVLYELMTGQLP 208
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 127/273 (46%), Gaps = 30/273 (10%)
Query: 351 DVIGRGGFGKVYRGVLASN----VQIAVKKVSHDSKQG-IKEFVAELVSMGRLRHRNLVK 405
+VIGRG FG VY G L N + AVK ++ + G + +F+ E + M H N++
Sbjct: 41 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 100
Query: 406 LRGYC-RRKGEFLLVYDYMPNGSLDKILHTNI-KPCLNWYQRFRIIRGVASGLLYLHEDW 463
L G C R +G L+V YM +G L + P + F + VA G+ +L
Sbjct: 101 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKFLAS-- 156
Query: 464 EQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDH--DTIPQTTKLVGTFGYMDPELMR 520
+ +HRD+ N +LD K+ DFGLAR +YD D++ T +M E ++
Sbjct: 157 -KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 215
Query: 521 TGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASDSRLE 580
T K +T +DV++FGV + E+ + P VN D + +
Sbjct: 216 TQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRLLQPE----- 265
Query: 581 GICEEKQMELVLKLGLFCSHPKPEARPNMRQVM 613
C + E++LK C HPK E RP+ +++
Sbjct: 266 -YCPDPLYEVMLK----CWHPKAEMRPSFSELV 293
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 127/273 (46%), Gaps = 30/273 (10%)
Query: 351 DVIGRGGFGKVYRGVLASN----VQIAVKKVSHDSKQG-IKEFVAELVSMGRLRHRNLVK 405
+VIGRG FG VY G L N + AVK ++ + G + +F+ E + M H N++
Sbjct: 55 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 114
Query: 406 LRGYC-RRKGEFLLVYDYMPNGSLDKILHTNI-KPCLNWYQRFRIIRGVASGLLYLHEDW 463
L G C R +G L+V YM +G L + P + F + VA G+ YL
Sbjct: 115 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYLAS-- 170
Query: 464 EQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDHD--TIPQTTKLVGTFGYMDPELMR 520
+ +HRD+ N +LD K+ DFGLAR +YD + ++ T +M E ++
Sbjct: 171 -KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 229
Query: 521 TGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASDSRLE 580
T K +T +DV++FGV + E+ + P VN D + +
Sbjct: 230 TQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRLLQPE----- 279
Query: 581 GICEEKQMELVLKLGLFCSHPKPEARPNMRQVM 613
C + E++LK C HPK E RP+ +++
Sbjct: 280 -YCPDPLYEVMLK----CWHPKAEMRPSFSELV 307
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 127/273 (46%), Gaps = 30/273 (10%)
Query: 351 DVIGRGGFGKVYRGVLASN----VQIAVKKVSHDSKQG-IKEFVAELVSMGRLRHRNLVK 405
+VIGRG FG VY G L N + AVK ++ + G + +F+ E + M H N++
Sbjct: 54 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 113
Query: 406 LRGYC-RRKGEFLLVYDYMPNGSLDKILHTNI-KPCLNWYQRFRIIRGVASGLLYLHEDW 463
L G C R +G L+V YM +G L + P + F + VA G+ YL
Sbjct: 114 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYLAS-- 169
Query: 464 EQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDHD--TIPQTTKLVGTFGYMDPELMR 520
+ +HRD+ N +LD K+ DFGLAR +YD + ++ T +M E ++
Sbjct: 170 -KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 228
Query: 521 TGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASDSRLE 580
T K +T +DV++FGV + E+ + P VN D + +
Sbjct: 229 TQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRLLQPE----- 278
Query: 581 GICEEKQMELVLKLGLFCSHPKPEARPNMRQVM 613
C + E++LK C HPK E RP+ +++
Sbjct: 279 -YCPDPLYEVMLK----CWHPKAEMRPSFSELV 306
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 100/198 (50%), Gaps = 9/198 (4%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCRR 412
IG G FG VY+G +V + + V+ + Q ++ F E+ + + RH N++ GY
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 102
Query: 413 KGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDI 472
K + +V + SL LH I+ + I R A G+ YLH + ++HRD+
Sbjct: 103 KPQLAIVTQWCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDL 158
Query: 473 KPANVLLDADLNGKLGDFGLARLYDH-DTIPQTTKLVGTFGYMDPELMRTGKA---STST 528
K N+ L DL K+GDFGLA Q +L G+ +M PE++R S +
Sbjct: 159 KSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 218
Query: 529 DVYAFGVFMLEVASGRRP 546
DVYAFG+ + E+ +G+ P
Sbjct: 219 DVYAFGIVLYELMTGQLP 236
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 127/273 (46%), Gaps = 30/273 (10%)
Query: 351 DVIGRGGFGKVYRGVLASN----VQIAVKKVSHDSKQG-IKEFVAELVSMGRLRHRNLVK 405
+VIGRG FG VY G L N + AVK ++ + G + +F+ E + M H N++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 406 LRGYC-RRKGEFLLVYDYMPNGSLDKILHTNI-KPCLNWYQRFRIIRGVASGLLYLHEDW 463
L G C R +G L+V YM +G L + P + F + VA G+ +L
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKFLAS-- 151
Query: 464 EQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDH--DTIPQTTKLVGTFGYMDPELMR 520
+ +HRD+ N +LD K+ DFGLAR +YD D++ T +M E ++
Sbjct: 152 -KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 210
Query: 521 TGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASDSRLE 580
T K +T +DV++FGV + E+ + P VN D + +
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRLLQPE----- 260
Query: 581 GICEEKQMELVLKLGLFCSHPKPEARPNMRQVM 613
C + E++LK C HPK E RP+ +++
Sbjct: 261 -YCPDPLYEVMLK----CWHPKAEMRPSFSELV 288
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 127/273 (46%), Gaps = 30/273 (10%)
Query: 351 DVIGRGGFGKVYRGVLASN----VQIAVKKVSHDSKQG-IKEFVAELVSMGRLRHRNLVK 405
+VIGRG FG VY G L N + AVK ++ + G + +F+ E + M H N++
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 406 LRGYC-RRKGEFLLVYDYMPNGSLDKILHTNI-KPCLNWYQRFRIIRGVASGLLYLHEDW 463
L G C R +G L+V YM +G L + P + F + VA G+ YL
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYLAS-- 150
Query: 464 EQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDHD--TIPQTTKLVGTFGYMDPELMR 520
+ +HRD+ N +LD K+ DFGLAR +YD + ++ T +M E ++
Sbjct: 151 -KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQ 209
Query: 521 TGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASDSRLE 580
T K +T +DV++FGV + E+ + P VN D + +
Sbjct: 210 TQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRLLQPE----- 259
Query: 581 GICEEKQMELVLKLGLFCSHPKPEARPNMRQVM 613
C + E++LK C HPK E RP+ +++
Sbjct: 260 -YCPDPLYEVMLK----CWHPKAEMRPSFSELV 287
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 139/290 (47%), Gaps = 30/290 (10%)
Query: 332 PQRFTYKDLYKATK-GFKDKDVIGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVA 390
PQ+ ++D ++ + K + +G G FG+V+ G + ++AVK + S F+A
Sbjct: 1 PQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLA 59
Query: 391 ELVSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHT--NIKPCLNWYQRFRI 448
E M +L+H+ LV+L ++ +++ +YM NGSL L T IK +N + +
Sbjct: 60 EANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTIN--KLLDM 116
Query: 449 IRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLV 508
+A G+ ++ E + +HRD++ AN+L+ L+ K+ DFGLARL + +
Sbjct: 117 AAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAK 173
Query: 509 GTFGYMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCDCWK 567
+ PE + G + +DV++FG+ + E+ + GR P + E + ++
Sbjct: 174 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE------- 226
Query: 568 KGAIRDASDSRLEGICEEKQMELVLKLGLFCSHPKPEARPN---MRQVMQ 614
R R + EE + +L C +PE RP +R V++
Sbjct: 227 ----RGYRMVRPDNCPEE-----LYQLMRLCWKERPEDRPTFDYLRSVLE 267
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 127/273 (46%), Gaps = 30/273 (10%)
Query: 351 DVIGRGGFGKVYRGVLASN----VQIAVKKVSHDSKQG-IKEFVAELVSMGRLRHRNLVK 405
+VIGRG FG VY G L N + AVK ++ + G + +F+ E + M H N++
Sbjct: 28 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 87
Query: 406 LRGYC-RRKGEFLLVYDYMPNGSLDKILHTNI-KPCLNWYQRFRIIRGVASGLLYLHEDW 463
L G C R +G L+V YM +G L + P + F + VA G+ YL
Sbjct: 88 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYLAS-- 143
Query: 464 EQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDHD--TIPQTTKLVGTFGYMDPELMR 520
+ +HRD+ N +LD K+ DFGLAR +YD + ++ T +M E ++
Sbjct: 144 -KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 202
Query: 521 TGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASDSRLE 580
T K +T +DV++FGV + E+ + P VN D + +
Sbjct: 203 TQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRLLQPE----- 252
Query: 581 GICEEKQMELVLKLGLFCSHPKPEARPNMRQVM 613
C + E++LK C HPK E RP+ +++
Sbjct: 253 -YCPDPLYEVMLK----CWHPKAEMRPSFSELV 280
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 127/273 (46%), Gaps = 30/273 (10%)
Query: 351 DVIGRGGFGKVYRGVLASN----VQIAVKKVSHDSKQG-IKEFVAELVSMGRLRHRNLVK 405
+VIGRG FG VY G L N + AVK ++ + G + +F+ E + M H N++
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 406 LRGYC-RRKGEFLLVYDYMPNGSLDKILHTNI-KPCLNWYQRFRIIRGVASGLLYLHEDW 463
L G C R +G L+V YM +G L + P + F + VA G+ YL
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYLAS-- 149
Query: 464 EQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDHD--TIPQTTKLVGTFGYMDPELMR 520
+ +HRD+ N +LD K+ DFGLAR +YD + ++ T +M E ++
Sbjct: 150 -KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 208
Query: 521 TGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASDSRLE 580
T K +T +DV++FGV + E+ + P VN D + +
Sbjct: 209 TQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRLLQPE----- 258
Query: 581 GICEEKQMELVLKLGLFCSHPKPEARPNMRQVM 613
C + E++LK C HPK E RP+ +++
Sbjct: 259 -YCPDPLYEVMLK----CWHPKAEMRPSFSELV 286
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 127/273 (46%), Gaps = 30/273 (10%)
Query: 351 DVIGRGGFGKVYRGVLASN----VQIAVKKVSHDSKQG-IKEFVAELVSMGRLRHRNLVK 405
+VIGRG FG VY G L N + AVK ++ + G + +F+ E + M H N++
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 406 LRGYC-RRKGEFLLVYDYMPNGSLDKILHTNI-KPCLNWYQRFRIIRGVASGLLYLHEDW 463
L G C R +G L+V YM +G L + P + F + VA G+ YL
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYLAS-- 150
Query: 464 EQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDHD--TIPQTTKLVGTFGYMDPELMR 520
+ +HRD+ N +LD K+ DFGLAR +YD + ++ T +M E ++
Sbjct: 151 -KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 209
Query: 521 TGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASDSRLE 580
T K +T +DV++FGV + E+ + P VN D + +
Sbjct: 210 TQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRLLQPE----- 259
Query: 581 GICEEKQMELVLKLGLFCSHPKPEARPNMRQVM 613
C + E++LK C HPK E RP+ +++
Sbjct: 260 -YCPDPLYEVMLK----CWHPKAEMRPSFSELV 287
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 127/273 (46%), Gaps = 30/273 (10%)
Query: 351 DVIGRGGFGKVYRGVLASN----VQIAVKKVSHDSKQG-IKEFVAELVSMGRLRHRNLVK 405
+VIGRG FG VY G L N + AVK ++ + G + +F+ E + M H N++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 406 LRGYC-RRKGEFLLVYDYMPNGSLDKILHTNI-KPCLNWYQRFRIIRGVASGLLYLHEDW 463
L G C R +G L+V YM +G L + P + F + VA G+ YL
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYLAS-- 151
Query: 464 EQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDHD--TIPQTTKLVGTFGYMDPELMR 520
+ +HRD+ N +LD K+ DFGLAR +YD + ++ T +M E ++
Sbjct: 152 -KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 210
Query: 521 TGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASDSRLE 580
T K +T +DV++FGV + E+ + P VN D + +
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRLLQPE----- 260
Query: 581 GICEEKQMELVLKLGLFCSHPKPEARPNMRQVM 613
C + E++LK C HPK E RP+ +++
Sbjct: 261 -YCPDPLYEVMLK----CWHPKAEMRPSFSELV 288
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 127/273 (46%), Gaps = 30/273 (10%)
Query: 351 DVIGRGGFGKVYRGVLASN----VQIAVKKVSHDSKQG-IKEFVAELVSMGRLRHRNLVK 405
+VIGRG FG VY G L N + AVK ++ + G + +F+ E + M H N++
Sbjct: 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 90
Query: 406 LRGYC-RRKGEFLLVYDYMPNGSLDKILHTNI-KPCLNWYQRFRIIRGVASGLLYLHEDW 463
L G C R +G L+V YM +G L + P + F + VA G+ YL
Sbjct: 91 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYLAS-- 146
Query: 464 EQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDHD--TIPQTTKLVGTFGYMDPELMR 520
+ +HRD+ N +LD K+ DFGLAR +YD + ++ T +M E ++
Sbjct: 147 -KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 205
Query: 521 TGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASDSRLE 580
T K +T +DV++FGV + E+ + P VN D + +
Sbjct: 206 TQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRLLQPE----- 255
Query: 581 GICEEKQMELVLKLGLFCSHPKPEARPNMRQVM 613
C + E++LK C HPK E RP+ +++
Sbjct: 256 -YCPDPLYEVMLK----CWHPKAEMRPSFSELV 283
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 127/273 (46%), Gaps = 30/273 (10%)
Query: 351 DVIGRGGFGKVYRGVLASN----VQIAVKKVSHDSKQG-IKEFVAELVSMGRLRHRNLVK 405
+VIGRG FG VY G L N + AVK ++ + G + +F+ E + M H N++
Sbjct: 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 92
Query: 406 LRGYC-RRKGEFLLVYDYMPNGSLDKILHTNI-KPCLNWYQRFRIIRGVASGLLYLHEDW 463
L G C R +G L+V YM +G L + P + F + VA G+ YL
Sbjct: 93 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKYLAS-- 148
Query: 464 EQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDHD--TIPQTTKLVGTFGYMDPELMR 520
+ +HRD+ N +LD K+ DFGLAR +YD + ++ T +M E ++
Sbjct: 149 -KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 207
Query: 521 TGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASDSRLE 580
T K +T +DV++FGV + E+ + P VN D + +
Sbjct: 208 TQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRLLQPE----- 257
Query: 581 GICEEKQMELVLKLGLFCSHPKPEARPNMRQVM 613
C + E++LK C HPK E RP+ +++
Sbjct: 258 -YCPDPLYEVMLK----CWHPKAEMRPSFSELV 285
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 139/290 (47%), Gaps = 30/290 (10%)
Query: 332 PQRFTYKDLYKATK-GFKDKDVIGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVA 390
PQ+ ++D ++ + K + +G G FG+V+ G + ++AVK + S F+A
Sbjct: 4 PQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLA 62
Query: 391 ELVSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHT--NIKPCLNWYQRFRI 448
E M +L+H+ LV+L ++ +++ +YM NGSL L T IK +N + +
Sbjct: 63 EANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTIN--KLLDM 119
Query: 449 IRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLV 508
+A G+ ++ E + +HRD++ AN+L+ L+ K+ DFGLARL + +
Sbjct: 120 AAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAK 176
Query: 509 GTFGYMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCDCWK 567
+ PE + G + +DV++FG+ + E+ + GR P + E + ++
Sbjct: 177 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE------- 229
Query: 568 KGAIRDASDSRLEGICEEKQMELVLKLGLFCSHPKPEARPN---MRQVMQ 614
R R + EE + +L C +PE RP +R V++
Sbjct: 230 ----RGYRMVRPDNCPEE-----LYQLMRLCWKERPEDRPTFDYLRSVLE 270
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 139/290 (47%), Gaps = 30/290 (10%)
Query: 332 PQRFTYKDLYKATK-GFKDKDVIGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVA 390
PQ+ ++D ++ + K + +G G FG+V+ G + ++AVK + S F+A
Sbjct: 5 PQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLA 63
Query: 391 ELVSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHT--NIKPCLNWYQRFRI 448
E M +L+H+ LV+L ++ +++ +YM NGSL L T IK +N + +
Sbjct: 64 EANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTIN--KLLDM 120
Query: 449 IRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLV 508
+A G+ ++ E + +HRD++ AN+L+ L+ K+ DFGLARL + +
Sbjct: 121 AAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAK 177
Query: 509 GTFGYMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCDCWK 567
+ PE + G + +DV++FG+ + E+ + GR P + E + ++
Sbjct: 178 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE------- 230
Query: 568 KGAIRDASDSRLEGICEEKQMELVLKLGLFCSHPKPEARPN---MRQVMQ 614
R R + EE + +L C +PE RP +R V++
Sbjct: 231 ----RGYRMVRPDNCPEE-----LYQLMRLCWKERPEDRPTFDYLRSVLE 271
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 139/290 (47%), Gaps = 30/290 (10%)
Query: 332 PQRFTYKDLYKATK-GFKDKDVIGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVA 390
PQ+ ++D ++ + K + +G G FG+V+ G + ++AVK + S F+A
Sbjct: 8 PQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLA 66
Query: 391 ELVSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHT--NIKPCLNWYQRFRI 448
E M +L+H+ LV+L ++ +++ +YM NGSL L T IK +N + +
Sbjct: 67 EANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTIN--KLLDM 123
Query: 449 IRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLV 508
+A G+ ++ E + +HRD++ AN+L+ L+ K+ DFGLARL + +
Sbjct: 124 AAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAK 180
Query: 509 GTFGYMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCDCWK 567
+ PE + G + +DV++FG+ + E+ + GR P + E + ++
Sbjct: 181 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE------- 233
Query: 568 KGAIRDASDSRLEGICEEKQMELVLKLGLFCSHPKPEARPN---MRQVMQ 614
R R + EE + +L C +PE RP +R V++
Sbjct: 234 ----RGYRMVRPDNCPEE-----LYQLMRLCWKERPEDRPTFDYLRSVLE 274
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 139/290 (47%), Gaps = 30/290 (10%)
Query: 332 PQRFTYKDLYKATK-GFKDKDVIGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVA 390
PQ+ ++D ++ + K + +G G FG+V+ G + ++AVK + S F+A
Sbjct: 9 PQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLA 67
Query: 391 ELVSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHT--NIKPCLNWYQRFRI 448
E M +L+H+ LV+L ++ +++ +YM NGSL L T IK +N + +
Sbjct: 68 EANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTIN--KLLDM 124
Query: 449 IRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLV 508
+A G+ ++ E + +HRD++ AN+L+ L+ K+ DFGLARL + +
Sbjct: 125 AAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAK 181
Query: 509 GTFGYMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCDCWK 567
+ PE + G + +DV++FG+ + E+ + GR P + E + ++
Sbjct: 182 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE------- 234
Query: 568 KGAIRDASDSRLEGICEEKQMELVLKLGLFCSHPKPEARPN---MRQVMQ 614
R R + EE + +L C +PE RP +R V++
Sbjct: 235 ----RGYRMVRPDNCPEE-----LYQLMRLCWKERPEDRPTFDYLRSVLE 275
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 139/290 (47%), Gaps = 30/290 (10%)
Query: 332 PQRFTYKDLYKATK-GFKDKDVIGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVA 390
PQ+ ++D ++ + K + +G G FG+V+ G + ++AVK + S F+A
Sbjct: 5 PQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLA 63
Query: 391 ELVSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHT--NIKPCLNWYQRFRI 448
E M +L+H+ LV+L ++ +++ +YM NGSL L T IK +N + +
Sbjct: 64 EANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTIN--KLLDM 120
Query: 449 IRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLV 508
+A G+ ++ E + +HRD++ AN+L+ L+ K+ DFGLARL + +
Sbjct: 121 AAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAK 177
Query: 509 GTFGYMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCDCWK 567
+ PE + G + +DV++FG+ + E+ + GR P + E + ++
Sbjct: 178 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE------- 230
Query: 568 KGAIRDASDSRLEGICEEKQMELVLKLGLFCSHPKPEARPN---MRQVMQ 614
R R + EE + +L C +PE RP +R V++
Sbjct: 231 ----RGYRMVRPDNCPEE-----LYQLMRLCWKERPEDRPTFDYLRSVLE 271
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 139/290 (47%), Gaps = 30/290 (10%)
Query: 332 PQRFTYKDLYKATK-GFKDKDVIGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVA 390
PQ+ ++D ++ + K + +G G FG+V+ G + ++AVK + S F+A
Sbjct: 7 PQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLA 65
Query: 391 ELVSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHT--NIKPCLNWYQRFRI 448
E M +L+H+ LV+L ++ +++ +YM NGSL L T IK +N + +
Sbjct: 66 EANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTIN--KLLDM 122
Query: 449 IRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLV 508
+A G+ ++ E + +HRD++ AN+L+ L+ K+ DFGLARL + +
Sbjct: 123 AAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAK 179
Query: 509 GTFGYMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCDCWK 567
+ PE + G + +DV++FG+ + E+ + GR P + E + ++
Sbjct: 180 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE------- 232
Query: 568 KGAIRDASDSRLEGICEEKQMELVLKLGLFCSHPKPEARPN---MRQVMQ 614
R R + EE + +L C +PE RP +R V++
Sbjct: 233 ----RGYRMVRPDNCPEE-----LYQLMRLCWKERPEDRPTFDYLRSVLE 273
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 127/265 (47%), Gaps = 20/265 (7%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCRR 412
IG G FG VY+G +V + + V+ + Q ++ F E+ + + RH N++ GY
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-T 90
Query: 413 KGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDI 472
K + +V + SL LH + + + I R A G+ YLH + ++HRD+
Sbjct: 91 KPQLAIVTQWCEGSSLYHHLHAS-ETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDL 146
Query: 473 KPANVLLDADLNGKLGDFGLARLYDH-DTIPQTTKLVGTFGYMDPELMR---TGKASTST 528
K N+ L D K+GDFGLA Q +L G+ +M PE++R + S +
Sbjct: 147 KSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQS 206
Query: 529 DVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASDSRLEGICEEKQM 588
DVYAFG+ + E+ +G+ P +N D + + +G++ S++ C ++
Sbjct: 207 DVYAFGIVLYELMTGQLPY------SNINNRDQIIEMVGRGSL-SPDLSKVRSNCPKRMK 259
Query: 589 ELVLKLGLFCSHPKPEARPNMRQVM 613
L+ + C K + RP+ +++
Sbjct: 260 RLMAE----CLKKKRDERPSFPRIL 280
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 98/206 (47%), Gaps = 6/206 (2%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCRR 412
IG G FG V+ G + ++A+K + + ++F+ E M +L H LV+L G C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 413 KGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDI 472
+ LV+++M +G L L T + + V G+ YL E V+HRD+
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDL 129
Query: 473 KPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDVYA 532
N L+ + K+ DFG+ R D +T + PE+ + S+ +DV++
Sbjct: 130 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 189
Query: 533 FGVFMLEVAS-GRRPVEQQGSMETVN 557
FGV M EV S G+ P E + + E V
Sbjct: 190 FGVLMWEVFSEGKIPYENRSNSEVVE 215
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 98/206 (47%), Gaps = 6/206 (2%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCRR 412
IG G FG V+ G + ++A+K + + ++F+ E M +L H LV+L G C
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 413 KGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDI 472
+ LV+++M +G L L T + + V G+ YL E V+HRD+
Sbjct: 72 QAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDL 127
Query: 473 KPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDVYA 532
N L+ + K+ DFG+ R D +T + PE+ + S+ +DV++
Sbjct: 128 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 187
Query: 533 FGVFMLEVAS-GRRPVEQQGSMETVN 557
FGV M EV S G+ P E + + E V
Sbjct: 188 FGVLMWEVFSEGKIPYENRSNSEVVE 213
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 98/206 (47%), Gaps = 6/206 (2%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCRR 412
IG G FG V+ G + ++A+K + + ++F+ E M +L H LV+L G C
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 413 KGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDI 472
+ LV+++M +G L L T + + V G+ YL E V+HRD+
Sbjct: 77 QAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDL 132
Query: 473 KPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDVYA 532
N L+ + K+ DFG+ R D +T + PE+ + S+ +DV++
Sbjct: 133 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 192
Query: 533 FGVFMLEVAS-GRRPVEQQGSMETVN 557
FGV M EV S G+ P E + + E V
Sbjct: 193 FGVLMWEVFSEGKIPYENRSNSEVVE 218
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 101/199 (50%), Gaps = 6/199 (3%)
Query: 350 KDVIGRGGFGKVYRGVLAS-NVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRG 408
K +G G +G+VY GV ++ +AVK + D+ + ++EF+ E M ++H NLV+L G
Sbjct: 37 KHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLG 95
Query: 409 YCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVL 468
C + F +V +YMP G+L L + + + ++S + YL ++ +
Sbjct: 96 VCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLE---KKNFI 152
Query: 469 HRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTST 528
HRD+ N L+ + K+ DFGL+RL DT + PE + S +
Sbjct: 153 HRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKS 212
Query: 529 DVYAFGVFMLEVAS-GRRP 546
DV+AFGV + E+A+ G P
Sbjct: 213 DVWAFGVLLWEIATYGMSP 231
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 97/198 (48%), Gaps = 9/198 (4%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCRR 412
IG G FG VY+G +V + + KV + + + F E+ + + RH N++ GY
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYM-T 102
Query: 413 KGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDI 472
K +V + SL K LH + +Q I R A G+ YLH + ++HRD+
Sbjct: 103 KDNLAIVTQWCEGSSLYKHLHVQ-ETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDM 158
Query: 473 KPANVLLDADLNGKLGDFGLARLYDH-DTIPQTTKLVGTFGYMDPELMR---TGKASTST 528
K N+ L L K+GDFGLA + Q + G+ +M PE++R S +
Sbjct: 159 KSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQS 218
Query: 529 DVYAFGVFMLEVASGRRP 546
DVY++G+ + E+ +G P
Sbjct: 219 DVYSYGIVLYELMTGELP 236
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 97/206 (47%), Gaps = 6/206 (2%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCRR 412
IG G FG V+ G + ++A+K + S +F+ E M +L H LV+L G C
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSE-DDFIEEAEVMMKLSHPKLVQLYGVCLE 93
Query: 413 KGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDI 472
+ LV+++M +G L L T + + V G+ YL E V+HRD+
Sbjct: 94 QAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDL 149
Query: 473 KPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDVYA 532
N L+ + K+ DFG+ R D +T + PE+ + S+ +DV++
Sbjct: 150 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 209
Query: 533 FGVFMLEVAS-GRRPVEQQGSMETVN 557
FGV M EV S G+ P E + + E V
Sbjct: 210 FGVLMWEVFSEGKIPYENRSNSEVVE 235
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 98/206 (47%), Gaps = 6/206 (2%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCRR 412
IG G FG V+ G + ++A+K + + ++F+ E M +L H LV+L G C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 413 KGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDI 472
+ LV+++M +G L L T + + V G+ YL E V+HRD+
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEE---ASVIHRDL 129
Query: 473 KPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDVYA 532
N L+ + K+ DFG+ R D +T + PE+ + S+ +DV++
Sbjct: 130 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 189
Query: 533 FGVFMLEVAS-GRRPVEQQGSMETVN 557
FGV M EV S G+ P E + + E V
Sbjct: 190 FGVLMWEVFSEGKIPYENRSNSEVVE 215
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 137/295 (46%), Gaps = 39/295 (13%)
Query: 326 WEREYGPQRFTYKDLYKATKGFKDKDVIGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGI 385
WE E+ R T K + + +G G FG+V+ G + ++AVK + S
Sbjct: 5 WEDEWEVPRETLKLVER----------LGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSP 53
Query: 386 KEFVAELVSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHT--NIKPCLNWY 443
F+AE M +L+H+ LV+L ++ +++ +YM NGSL L T IK +N
Sbjct: 54 DAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTIN-- 110
Query: 444 QRFRIIRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQ 503
+ + +A G+ ++ E + +HRD++ AN+L+ L+ K+ DFGLARL + +
Sbjct: 111 KLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTA 167
Query: 504 TTKLVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWV 562
+ PE + G + +DV++FG+ + E+ + GR P + E + ++
Sbjct: 168 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-- 225
Query: 563 CDCWKKGAIRDASDSRLEGICEEKQMELVLKLGLFCSHPKPEARPN---MRQVMQ 614
R R + EE + +L C +PE RP +R V++
Sbjct: 226 ---------RGYRMVRPDNCPEE-----LYQLMRLCWKERPEDRPTFDYLRSVLE 266
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 128/282 (45%), Gaps = 38/282 (13%)
Query: 350 KDVIGRGGFGKVYRGVL------ASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNL 403
K +G G FGKV+ + +AVK + S K+F E + L+H ++
Sbjct: 18 KRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHI 77
Query: 404 VKLRGYCRRKGEFLLVYDYMPNGSLDKILHT-----------NIKPCLNWYQRFRIIRGV 452
VK G C ++V++YM +G L+K L N L Q I + +
Sbjct: 78 VKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQI 137
Query: 453 ASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDHDTIPQTTKLVGTF 511
A+G++YL Q +HRD+ N L+ +L K+GDFG++R +Y D +
Sbjct: 138 AAGMVYLA---SQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 194
Query: 512 GYMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCDCWKKGA 570
+M PE + K +T +DV++ GV + E+ + G++P Q + E + +C +G
Sbjct: 195 RWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVI-------ECITQGR 247
Query: 571 IRDASDSRLEGICEEKQMELVLKLGLFCSHPKPEARPNMRQV 612
+ + C ++ EL+L C +P R N++ +
Sbjct: 248 VLQRPRT-----CPQEVYELMLG----CWQREPHMRKNIKGI 280
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 137/295 (46%), Gaps = 39/295 (13%)
Query: 326 WEREYGPQRFTYKDLYKATKGFKDKDVIGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGI 385
WE E+ R T K + + +G G FG+V+ G + ++AVK + S
Sbjct: 4 WEDEWEVPRETLKLVER----------LGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSP 52
Query: 386 KEFVAELVSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHT--NIKPCLNWY 443
F+AE M +L+H+ LV+L ++ +++ +YM NGSL L T IK +N
Sbjct: 53 DAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTIN-- 109
Query: 444 QRFRIIRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQ 503
+ + +A G+ ++ E + +HRD++ AN+L+ L+ K+ DFGLARL + +
Sbjct: 110 KLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTA 166
Query: 504 TTKLVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWV 562
+ PE + G + +DV++FG+ + E+ + GR P + E + ++
Sbjct: 167 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-- 224
Query: 563 CDCWKKGAIRDASDSRLEGICEEKQMELVLKLGLFCSHPKPEARPN---MRQVMQ 614
R R + EE + +L C +PE RP +R V++
Sbjct: 225 ---------RGYRMVRPDNCPEE-----LYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 137/295 (46%), Gaps = 39/295 (13%)
Query: 326 WEREYGPQRFTYKDLYKATKGFKDKDVIGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGI 385
WE E+ R T K + + +G G FG+V+ G + ++AVK + S
Sbjct: 4 WEDEWEVPRETLKLVER----------LGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSP 52
Query: 386 KEFVAELVSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHT--NIKPCLNWY 443
F+AE M +L+H+ LV+L ++ +++ +YM NGSL L T IK +N
Sbjct: 53 DAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTIN-- 109
Query: 444 QRFRIIRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQ 503
+ + +A G+ ++ E + +HRD++ AN+L+ L+ K+ DFGLARL + +
Sbjct: 110 KLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTA 166
Query: 504 TTKLVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWV 562
+ PE + G + +DV++FG+ + E+ + GR P + E + ++
Sbjct: 167 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-- 224
Query: 563 CDCWKKGAIRDASDSRLEGICEEKQMELVLKLGLFCSHPKPEARPN---MRQVMQ 614
R R + EE + +L C +PE RP +R V++
Sbjct: 225 ---------RGYRMVRPDNCPEE-----LYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 133/285 (46%), Gaps = 41/285 (14%)
Query: 350 KDVIGRGGFGKVYRGVL------ASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNL 403
K +G G FGKV+ + +AVK + + K+F E + L+H ++
Sbjct: 20 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHI 79
Query: 404 VKLRGYCRRKGEFLLVYDYMPNGSLDKILHTN--------------IKPCLNWYQRFRII 449
VK G C ++V++YM +G L+K L + K L Q I
Sbjct: 80 VKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIA 139
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDHDTIPQTTKLV 508
+ASG++YL Q +HRD+ N L+ A+L K+GDFG++R +Y D +
Sbjct: 140 SQIASGMVYLA---SQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTM 196
Query: 509 GTFGYMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCDCWK 567
+M PE + K +T +DV++FGV + E+ + G++P Q + E V +C
Sbjct: 197 LPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE-------VIECIT 249
Query: 568 KGAIRDASDSRLEGICEEKQMELVLKLGLFCSHPKPEARPNMRQV 612
+G + + +C ++ +++L C +P+ R N++++
Sbjct: 250 QGRVLERPR-----VCPKEVYDVMLG----CWQREPQQRLNIKEI 285
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 137/295 (46%), Gaps = 39/295 (13%)
Query: 326 WEREYGPQRFTYKDLYKATKGFKDKDVIGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGI 385
WE E+ R T K + + +G G FG+V+ G + ++AVK + S
Sbjct: 4 WEDEWEVPRETLKLVER----------LGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSP 52
Query: 386 KEFVAELVSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHT--NIKPCLNWY 443
F+AE M +L+H+ LV+L ++ +++ +YM NGSL L T IK +N
Sbjct: 53 DAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTIN-- 109
Query: 444 QRFRIIRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQ 503
+ + +A G+ ++ E + +HRD++ AN+L+ L+ K+ DFGLARL + +
Sbjct: 110 KLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTA 166
Query: 504 TTKLVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWV 562
+ PE + G + +DV++FG+ + E+ + GR P + E + ++
Sbjct: 167 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-- 224
Query: 563 CDCWKKGAIRDASDSRLEGICEEKQMELVLKLGLFCSHPKPEARPN---MRQVMQ 614
R R + EE + +L C +PE RP +R V++
Sbjct: 225 ---------RGYRMVRPDNCPEE-----LYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 117/265 (44%), Gaps = 28/265 (10%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCRR 412
+G G FG V G +AVK + S EF E +M +L H LVK G C +
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSE-DEFFQEAQTMMKLSHPKLVKFYGVCSK 74
Query: 413 KGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDI 472
+ +V +Y+ NG L L ++ K L Q + V G+ +L +HRD+
Sbjct: 75 EYPIYIVTEYISNGCLLNYLRSHGKG-LEPSQLLEMCYDVCEGMAFLE---SHQFIHRDL 130
Query: 473 KPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGT---FGYMDPELMRTGKASTSTD 529
N L+D DL K+ DFG+ R D Q VGT + PE+ K S+ +D
Sbjct: 131 AARNCLVDRDLCVKVSDFGMTRYVLDD---QYVSSVGTKFPVKWSAPEVFHYFKYSSKSD 187
Query: 530 VYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASDSRLEGICEEKQM 588
V+AFG+ M EV S G+ P + + E V V ++ ASD+
Sbjct: 188 VWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHL---ASDT----------- 233
Query: 589 ELVLKLGLFCSHPKPEARPNMRQVM 613
+ ++ C H PE RP +Q++
Sbjct: 234 --IYQIMYSCWHELPEKRPTFQQLL 256
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 108/220 (49%), Gaps = 19/220 (8%)
Query: 345 KGFKDKDVIGRGGFGKVY--RGVLASNVQIAVKKVSHDSKQG---IKEFVAELVSMGRLR 399
K F D IG G FG VY R V S V +A+KK+S+ KQ ++ + E+ + +LR
Sbjct: 15 KLFSDLREIGHGSFGAVYFARDVRNSEV-VAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 73
Query: 400 HRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYL 459
H N ++ RG R+ LV +Y GS +L + KP L + + G GL YL
Sbjct: 74 HPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKP-LQEVEIAAVTHGALQGLAYL 131
Query: 460 HEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPEL- 518
H ++HRD+K N+LL KLGDFG A + + VGT +M PE+
Sbjct: 132 HS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASI-----MAPANXFVGTPYWMAPEVI 183
Query: 519 --MRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETV 556
M G+ DV++ G+ +E+A + P+ +M +
Sbjct: 184 LAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL 223
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 125/273 (45%), Gaps = 30/273 (10%)
Query: 351 DVIGRGGFGKVYRGVLASN----VQIAVKKVSHDSKQG-IKEFVAELVSMGRLRHRNLVK 405
+VIGRG FG VY G L N + AVK ++ + G + +F+ E + M H N++
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 96
Query: 406 LRGYC-RRKGEFLLVYDYMPNGSLDKILHTNI-KPCLNWYQRFRIIRGVASGLLYLHEDW 463
L G C R +G L+V YM +G L + P + F + VA G+ +L
Sbjct: 97 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL--QVAKGMKFLAS-- 152
Query: 464 EQVVLHRDIKPANVLLDADLNGKLGDFGLARLY---DHDTIPQTTKLVGTFGYMDPELMR 520
+ +HRD+ N +LD K+ DFGLAR + D++ T +M E ++
Sbjct: 153 -KKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQ 211
Query: 521 TGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASDSRLE 580
T K +T +DV++FGV + E+ + P VN D + +
Sbjct: 212 TQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRLLQPE----- 261
Query: 581 GICEEKQMELVLKLGLFCSHPKPEARPNMRQVM 613
C + E++LK C HPK E RP+ +++
Sbjct: 262 -YCPDPLYEVMLK----CWHPKAEMRPSFSELV 289
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 110/234 (47%), Gaps = 23/234 (9%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCRR 412
+G+G FG+V+ G ++A+K + + + F+ E M +LRH LV+L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 413 KGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDI 472
+ ++++ +YM GSL L + L Q + +ASG+ Y+ +HRD+
Sbjct: 85 EPIYIVI-EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDL 140
Query: 473 KPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDVYA 532
+ AN+L+ +L K+ DFGLARL + + + PE G+ + +DV++
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 533 FGVFMLEVAS-GRRPVEQQGSMETVNLV-----------------DWVCDCWKK 568
FG+ + E+ + GR P + E ++ V D +C CW+K
Sbjct: 201 FGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRK 254
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 108/220 (49%), Gaps = 19/220 (8%)
Query: 345 KGFKDKDVIGRGGFGKVY--RGVLASNVQIAVKKVSHDSKQG---IKEFVAELVSMGRLR 399
K F D IG G FG VY R V S V +A+KK+S+ KQ ++ + E+ + +LR
Sbjct: 54 KLFSDLREIGHGSFGAVYFARDVRNSEV-VAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 112
Query: 400 HRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYL 459
H N ++ RG R+ LV +Y GS +L + KP L + + G GL YL
Sbjct: 113 HPNTIQYRGCYLREHTAWLVMEYC-LGSASDLLEVHKKP-LQEVEIAAVTHGALQGLAYL 170
Query: 460 HEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPEL- 518
H ++HRD+K N+LL KLGDFG A + + VGT +M PE+
Sbjct: 171 HS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASI-----MAPANXFVGTPYWMAPEVI 222
Query: 519 --MRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETV 556
M G+ DV++ G+ +E+A + P+ +M +
Sbjct: 223 LAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL 262
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 126/265 (47%), Gaps = 20/265 (7%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCRR 412
IG G FG VY+G +V + + V+ + Q ++ F E+ + + RH N++ GY
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 91
Query: 413 KGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDI 472
+ +V + SL LH + + + I R A G+ YLH + ++HRD+
Sbjct: 92 P-QLAIVTQWCEGSSLYHHLHAS-ETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDL 146
Query: 473 KPANVLLDADLNGKLGDFGLARLYDH-DTIPQTTKLVGTFGYMDPELMRTGKA---STST 528
K N+ L D K+GDFGLA Q +L G+ +M PE++R + S +
Sbjct: 147 KSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQS 206
Query: 529 DVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASDSRLEGICEEKQM 588
DVYAFG+ + E+ +G+ P +N D + + +G++ S++ C ++
Sbjct: 207 DVYAFGIVLYELMTGQLPY------SNINNRDQIIEMVGRGSL-SPDLSKVRSNCPKRMK 259
Query: 589 ELVLKLGLFCSHPKPEARPNMRQVM 613
L+ + C K + RP+ +++
Sbjct: 260 RLMAE----CLKKKRDERPSFPRIL 280
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 110/234 (47%), Gaps = 23/234 (9%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCRR 412
+G+G FG+V+ G ++A+K + + + F+ E M +LRH LV+L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 413 KGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDI 472
+ ++++ +YM GSL L + L Q + +ASG+ Y+ +HRD+
Sbjct: 85 EPIYIVI-EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDL 140
Query: 473 KPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDVYA 532
+ AN+L+ +L K+ DFGLARL + + + PE G+ + +DV++
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 533 FGVFMLEVAS-GRRPVEQQGSMETVNLV-----------------DWVCDCWKK 568
FG+ + E+ + GR P + E ++ V D +C CW+K
Sbjct: 201 FGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRK 254
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 97/206 (47%), Gaps = 6/206 (2%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCRR 412
IG G FG V+ G + ++A+K + + ++F+ E M +L H LV+L G C
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 413 KGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDI 472
+ LV ++M +G L L T + + V G+ YL E V+HRD+
Sbjct: 75 QAPICLVTEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDL 130
Query: 473 KPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDVYA 532
N L+ + K+ DFG+ R D +T + PE+ + S+ +DV++
Sbjct: 131 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 190
Query: 533 FGVFMLEVAS-GRRPVEQQGSMETVN 557
FGV M EV S G+ P E + + E V
Sbjct: 191 FGVLMWEVFSEGKIPYENRSNSEVVE 216
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 109/234 (46%), Gaps = 23/234 (9%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCRR 412
+G+G FG+V+ G ++A+K + + + F+ E M +LRH LV+L
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 73
Query: 413 KGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDI 472
+ ++ V +YM GSL L + L Q + +ASG+ Y+ +HRD+
Sbjct: 74 EPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDL 129
Query: 473 KPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDVYA 532
+ AN+L+ +L K+ DFGLARL + + + PE G+ + +DV++
Sbjct: 130 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 189
Query: 533 FGVFMLEVAS-GRRPVEQQGSMETVNLV-----------------DWVCDCWKK 568
FG+ + E+ + GR P + E ++ V D +C CW+K
Sbjct: 190 FGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRK 243
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 109/234 (46%), Gaps = 23/234 (9%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCRR 412
+G+G FG+V+ G ++A+K + + + F+ E M +LRH LV+L
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 75
Query: 413 KGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDI 472
+ ++ V +YM GSL L + L Q + +ASG+ Y+ +HRD+
Sbjct: 76 EPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDL 131
Query: 473 KPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDVYA 532
+ AN+L+ +L K+ DFGLARL + + + PE G+ + +DV++
Sbjct: 132 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 191
Query: 533 FGVFMLEVAS-GRRPVEQQGSMETVNLV-----------------DWVCDCWKK 568
FG+ + E+ + GR P + E ++ V D +C CW+K
Sbjct: 192 FGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRK 245
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 109/234 (46%), Gaps = 23/234 (9%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCRR 412
+G+G FG+V+ G ++A+K + + + F+ E M +LRH LV+L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 413 KGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDI 472
+ ++ V +YM GSL L + L Q + +ASG+ Y+ +HRD+
Sbjct: 85 EPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDL 140
Query: 473 KPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDVYA 532
+ AN+L+ +L K+ DFGLARL + + + PE G+ + +DV++
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 533 FGVFMLEVAS-GRRPVEQQGSMETVNLV-----------------DWVCDCWKK 568
FG+ + E+ + GR P + E ++ V D +C CW+K
Sbjct: 201 FGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRK 254
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 109/234 (46%), Gaps = 23/234 (9%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCRR 412
+G+G FG+V+ G ++A+K + + + F+ E M +LRH LV+L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 413 KGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDI 472
+ ++ V +YM GSL L + L Q + +ASG+ Y+ +HRD+
Sbjct: 85 EPIYI-VCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDL 140
Query: 473 KPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDVYA 532
+ AN+L+ +L K+ DFGLARL + + + PE G+ + +DV++
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 533 FGVFMLEVAS-GRRPVEQQGSMETVNLV-----------------DWVCDCWKK 568
FG+ + E+ + GR P + E ++ V D +C CW+K
Sbjct: 201 FGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRK 254
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 107/234 (45%), Gaps = 23/234 (9%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCRR 412
+G+G FG+V+ G ++A+K + + + F+ E M +LRH LV+L
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 74
Query: 413 KGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDI 472
+ +V +YM GSL L L Q + +ASG+ Y+ +HRD+
Sbjct: 75 E-PIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDL 130
Query: 473 KPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDVYA 532
+ AN+L+ +L K+ DFGLARL + + + PE G+ + +DV++
Sbjct: 131 RAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 190
Query: 533 FGVFMLEVAS-GRRPVEQQGSMETVNLV-----------------DWVCDCWKK 568
FG+ + E+ + GR P + E ++ V D +C CW+K
Sbjct: 191 FGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRK 244
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 128/268 (47%), Gaps = 29/268 (10%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCRR 412
+G G FG+V+ G + ++AVK + S F+AE M +L+H+ LV+L +
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 74
Query: 413 KGEFLLVYDYMPNGSLDKILHT--NIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHR 470
+ +++ +YM NGSL L T IK +N + + +A G+ ++ E + +HR
Sbjct: 75 EPIYIIT-EYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEE---RNYIHR 128
Query: 471 DIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDV 530
D++ AN+L+ L+ K+ DFGLARL + + + PE + G + +DV
Sbjct: 129 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 188
Query: 531 YAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASDSRLEGICEEKQME 589
++FG+ + E+ + GR P + E + ++ R R + EE
Sbjct: 189 WSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-----------RGYRMVRPDNCPEE---- 233
Query: 590 LVLKLGLFCSHPKPEARPN---MRQVMQ 614
+ +L C +PE RP +R V++
Sbjct: 234 -LYQLMRLCWKERPEDRPTFDYLRSVLE 260
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 110/218 (50%), Gaps = 30/218 (13%)
Query: 343 ATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGIKEF-VAELVSMGRLRH 400
++ FK + +G G + VY+G+ + V +A+K+V DS++G + E+ M L+H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPN-----------GSLDKILHTNIKPCLNWYQRFRII 449
N+V+L + + LV+++M N G+ + L N+ W
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQ------ 116
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTT--KL 507
+ GL + HE+ +LHRD+KP N+L++ KLGDFGLAR + IP T
Sbjct: 117 --LLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFG---IPVNTFSSE 168
Query: 508 VGTFGYMDPE-LMRTGKASTSTDVYAFGVFMLEVASGR 544
V T Y P+ LM + STS D+++ G + E+ +G+
Sbjct: 169 VVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 107/234 (45%), Gaps = 23/234 (9%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCRR 412
+G+G FG+V+ G ++A+K + + + F+ E M +LRH LV+L
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 333
Query: 413 KGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDI 472
+ +V +YM GSL L L Q + +ASG+ Y+ +HRD+
Sbjct: 334 E-PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDL 389
Query: 473 KPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDVYA 532
+ AN+L+ +L K+ DFGLARL + + + PE G+ + +DV++
Sbjct: 390 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 449
Query: 533 FGVFMLEVAS-GRRPVEQQGSMETVNLV-----------------DWVCDCWKK 568
FG+ + E+ + GR P + E ++ V D +C CW+K
Sbjct: 450 FGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRK 503
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 108/234 (46%), Gaps = 23/234 (9%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCRR 412
+G+G FG+V+ G ++A+K + + + F+ E M +LRH LV+L
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 413 KGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDI 472
+ ++ V +YM GSL L L Q + +ASG+ Y+ +HRD+
Sbjct: 251 EPIYI-VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDL 306
Query: 473 KPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDVYA 532
+ AN+L+ +L K+ DFGLARL + + + PE G+ + +DV++
Sbjct: 307 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 366
Query: 533 FGVFMLEVAS-GRRPVEQQGSMETVNLV-----------------DWVCDCWKK 568
FG+ + E+ + GR P + E ++ V D +C CW+K
Sbjct: 367 FGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRK 420
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 108/234 (46%), Gaps = 23/234 (9%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCRR 412
+G+G FG+V+ G ++A+K + + + F+ E M +LRH LV+L
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 77
Query: 413 KGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDI 472
+ ++ V +YM GSL L L Q + +ASG+ Y+ +HRD+
Sbjct: 78 EPIYI-VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDL 133
Query: 473 KPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDVYA 532
+ AN+L+ +L K+ DFGLARL + + + PE G+ + +DV++
Sbjct: 134 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 193
Query: 533 FGVFMLEVAS-GRRPVEQQGSMETVNLV-----------------DWVCDCWKK 568
FG+ + E+ + GR P + E ++ V D +C CW+K
Sbjct: 194 FGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRK 247
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 108/234 (46%), Gaps = 23/234 (9%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCRR 412
+G+G FG+V+ G ++A+K + + + F+ E M +LRH LV+L
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 413 KGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDI 472
+ ++ V +YM GSL L L Q + +ASG+ Y+ +HRD+
Sbjct: 251 EPIYI-VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDL 306
Query: 473 KPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDVYA 532
+ AN+L+ +L K+ DFGLARL + + + PE G+ + +DV++
Sbjct: 307 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 366
Query: 533 FGVFMLEVAS-GRRPVEQQGSMETVNLV-----------------DWVCDCWKK 568
FG+ + E+ + GR P + E ++ V D +C CW+K
Sbjct: 367 FGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRK 420
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 109/234 (46%), Gaps = 23/234 (9%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCRR 412
+G+G FG+V+ G ++A+K + + + F+ E M ++RH LV+L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKIRHEKLVQLYAVVSE 84
Query: 413 KGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDI 472
+ ++ V +YM GSL L + L Q + +ASG+ Y+ +HRD+
Sbjct: 85 EPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDL 140
Query: 473 KPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDVYA 532
+ AN+L+ +L K+ DFGLARL + + + PE G+ + +DV++
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 533 FGVFMLEVAS-GRRPVEQQGSMETVNLV-----------------DWVCDCWKK 568
FG+ + E+ + GR P + E ++ V D +C CW+K
Sbjct: 201 FGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRK 254
>pdb|2FMD|A Chain A, Structural Basis Of Carbohydrate Recognition By Bowringia
Milbraedii Seed Agglutinin
Length = 240
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 108/246 (43%), Gaps = 34/246 (13%)
Query: 30 FIYHGFNEDAQ-LQRDGLASVHSNGLLQLTNTVS---PQ--QEGHAFYRLPIKFNTXXXX 83
F + F Q L G ASV SN LQLT S PQ G A Y PI+
Sbjct: 6 FTFTDFESGQQDLIFQGDASVGSNKALQLTKVDSKGNPQGGSVGRALYTAPIRLWQSSSL 65
Query: 84 XXXXXXNFVFAIGMA----------FVISPSKDLGKAEASPSEYLGLFNASNNGQSTNHI 133
F F+I F+ SP D S LGLF +SNN S N +
Sbjct: 66 VASFETTFTFSISQGSSTPADALTFFIASP--DTKIPSGSGGRLLGLFGSSNNAGSDNGV 123
Query: 134 LAIELDTVQNLDFDDIDDNHVGIDVNSLISHESAPAAYFSDREGMNKTLELIIGDPIQIW 193
+++E DT N D D + H+GIDVNS+ S A+ + + G T
Sbjct: 124 VSVEFDTYPNTDIGDPNYRHIGIDVNSI---RSKAASKWDWQNGKTATAH---------- 170
Query: 194 ISYDGAEKLLNVTLAPMSIPKPTKPLLSRAINLSHILLETMYVGFSASTGSLKSSHYVLG 253
ISY+ A K L+V S P + ++S + L+++ + VGFSA+TG ++ +L
Sbjct: 171 ISYNSASKRLSVV---SSYPNSSPVVVSFDVELNNVXPXWVRVGFSATTGQYTQTNNILA 227
Query: 254 WSFNRS 259
WSF S
Sbjct: 228 WSFRSS 233
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 108/234 (46%), Gaps = 23/234 (9%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCRR 412
+G+G FG+V+ G ++A+K + + + F+ E M +LRH LV+L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 413 KGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDI 472
+ ++ V +YM GSL L + L Q + +ASG+ Y+ +HRD+
Sbjct: 85 EPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDL 140
Query: 473 KPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDVYA 532
AN+L+ +L K+ DFGLARL + + + PE G+ + +DV++
Sbjct: 141 AAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 533 FGVFMLEVAS-GRRPVEQQGSMETVNLV-----------------DWVCDCWKK 568
FG+ + E+ + GR P + E ++ V D +C CW+K
Sbjct: 201 FGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRK 254
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 107/234 (45%), Gaps = 23/234 (9%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCRR 412
+G+G FG+V+ G ++A+K + + + F+ E M +LRH LV+L
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 413 KGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDI 472
+ +V +YM GSL L L Q + +ASG+ Y+ +HRD+
Sbjct: 251 E-PIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDL 306
Query: 473 KPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDVYA 532
+ AN+L+ +L K+ DFGLARL + + + PE G+ + +DV++
Sbjct: 307 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 366
Query: 533 FGVFMLEVAS-GRRPVEQQGSMETVNLV-----------------DWVCDCWKK 568
FG+ + E+ + GR P + E ++ V D +C CW+K
Sbjct: 367 FGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRK 420
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 108/234 (46%), Gaps = 23/234 (9%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCRR 412
+G+G FG+V+ G ++A+K + + + F+ E M +LRH LV+L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 413 KGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDI 472
+ ++ V +YM G L L + L Q + +ASG+ Y+ +HRD+
Sbjct: 85 EPIYI-VMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDL 140
Query: 473 KPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDVYA 532
+ AN+L+ +L K+ DFGLARL + + + PE G+ + +DV++
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 533 FGVFMLEVAS-GRRPVEQQGSMETVNLV-----------------DWVCDCWKK 568
FG+ + E+ + GR P + E ++ V D +C CW+K
Sbjct: 201 FGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRK 254
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 108/234 (46%), Gaps = 23/234 (9%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCRR 412
+G+G FG+V+ G ++A+K + + + F+ E M +LRH LV+L
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 413 KGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDI 472
+ ++ V +YM G L L + L Q + +ASG+ Y+ +HRD+
Sbjct: 85 EPIYI-VTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDL 140
Query: 473 KPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDVYA 532
+ AN+L+ +L K+ DFGLARL + + + PE G+ + +DV++
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 533 FGVFMLEVAS-GRRPVEQQGSMETVNLV-----------------DWVCDCWKK 568
FG+ + E+ + GR P + E ++ V D +C CW+K
Sbjct: 201 FGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRK 254
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 108/234 (46%), Gaps = 23/234 (9%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCRR 412
+G+G FG+V+ G ++A+K + + + F+ E M +LRH LV+L
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 413 KGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDI 472
+ ++ V +YM GSL L L Q + +ASG+ Y+ +HRD+
Sbjct: 82 EPIYI-VTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVER---MNYVHRDL 137
Query: 473 KPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDVYA 532
+ AN+L+ +L K+ DFGLARL + + + PE G+ + +DV++
Sbjct: 138 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 197
Query: 533 FGVFMLEVAS-GRRPVEQQGSMETVNLV-----------------DWVCDCWKK 568
FG+ + E+ + GR P + E ++ V D +C CW+K
Sbjct: 198 FGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRK 251
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 106/234 (45%), Gaps = 23/234 (9%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCRR 412
+G+G FG+V+ G ++A+K + + F+ E M +LRH LV+L
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLK-PGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 251
Query: 413 KGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDI 472
+ +V +YM GSL L + L Q + +ASG+ Y+ +HRD+
Sbjct: 252 E-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDL 307
Query: 473 KPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDVYA 532
+ AN+L+ +L K+ DFGL RL + + + PE G+ + +DV++
Sbjct: 308 RAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 367
Query: 533 FGVFMLEVAS-GRRPVEQQGSMETVNLV-----------------DWVCDCWKK 568
FG+ + E+ + GR P + E ++ V D +C CW+K
Sbjct: 368 FGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRK 421
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 108/234 (46%), Gaps = 23/234 (9%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCRR 412
+G+G FG+V+ G ++A+K + + + F+ E M +LRH LV+L
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 413 KGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDI 472
+ ++ V +YM GSL L L Q + +ASG+ Y+ +HRD+
Sbjct: 82 EPIYI-VTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVER---MNYVHRDL 137
Query: 473 KPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDVYA 532
+ AN+L+ +L K+ DFGLARL + + + PE G+ + +DV++
Sbjct: 138 RAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 197
Query: 533 FGVFMLEVAS-GRRPVEQQGSMETVNLV-----------------DWVCDCWKK 568
FG+ + E+ + GR P + E ++ V D +C CW+K
Sbjct: 198 FGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRK 251
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 128/292 (43%), Gaps = 26/292 (8%)
Query: 329 EYGPQRFTYKDL-YKATKGFKDKDVIGRGGFGKVYRG-VLASNVQIAVKKVS----HDSK 382
++ PQ+ D+ Y F+ + IGRG F +VYR L V +A+KKV D+K
Sbjct: 15 QFQPQKALRPDMGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAK 74
Query: 383 QGIKEFVAELVSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILH--TNIKPCL 440
+ + E+ + +L H N++K E +V + G L +++ K +
Sbjct: 75 -ARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLI 133
Query: 441 NWYQRFRIIRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDT 500
++ + S L ++H + V+HRDIKPANV + A KLGD GL R + T
Sbjct: 134 PERTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT 190
Query: 501 IPQTTKLVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVD 560
+ LVGT YM PE + + +D+++ G + E+A+ + P M +L
Sbjct: 191 TAAHS-LVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPF-YGDKMNLYSLCK 248
Query: 561 WVCDCWKKGAIRDASDSRLEGICEEKQMELVLKLGLFCSHPKPEARPNMRQV 612
+ C D L +L C +P PE RP++ V
Sbjct: 249 KIEQCDYPPLPSDHYSEELR------------QLVNMCINPDPEKRPDVTYV 288
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 112/220 (50%), Gaps = 15/220 (6%)
Query: 349 DKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLR 407
D+ V+G+G +G VY G L++ V+IA+K++ + + E+ L+H+N+V+
Sbjct: 26 DRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYL 85
Query: 408 GYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRI-IRGVASGLLYLHEDWEQV 466
G G + + +P GSL +L + P + Q + + GL YLH++
Sbjct: 86 GSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ--- 142
Query: 467 VLHRDIKPANVLLDADLNG--KLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKA 524
++HRDIK NVL++ +G K+ DFG ++ P T GT YM PE++ G
Sbjct: 143 IVHRDIKGDNVLINT-YSGVLKISDFGTSKRL-AGINPCTETFTGTLQYMAPEIIDKGPR 200
Query: 525 --STSTDVYAFGVFMLEVASGRRPV----EQQGSMETVNL 558
+ D+++ G ++E+A+G+ P E Q +M V +
Sbjct: 201 GYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGM 240
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 128/268 (47%), Gaps = 29/268 (10%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCRR 412
+G G FG+V+ G + ++AVK + S F+AE M +L+H+ LV+L +
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 75
Query: 413 KGEFLLVYDYMPNGSLDKILHT--NIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHR 470
+ +++ +YM NGSL L T IK +N + + +A G+ ++ E + +HR
Sbjct: 76 EPIYIIT-EYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEE---RNYIHR 129
Query: 471 DIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDV 530
+++ AN+L+ L+ K+ DFGLARL + + + PE + G + +DV
Sbjct: 130 NLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 189
Query: 531 YAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASDSRLEGICEEKQME 589
++FG+ + E+ + GR P + E + ++ R R + EE
Sbjct: 190 WSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-----------RGYRMVRPDNCPEE---- 234
Query: 590 LVLKLGLFCSHPKPEARPN---MRQVMQ 614
+ +L C +PE RP +R V++
Sbjct: 235 -LYQLMRLCWKERPEDRPTFDYLRSVLE 261
>pdb|3USU|B Chain B, Crystal Structure Of Butea Monosperma Seed Lectin
pdb|3USU|D Chain D, Crystal Structure Of Butea Monosperma Seed Lectin
pdb|3USU|F Chain F, Crystal Structure Of Butea Monosperma Seed Lectin
pdb|3USU|H Chain H, Crystal Structure Of Butea Monosperma Seed Lectin
Length = 242
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 120/251 (47%), Gaps = 39/251 (15%)
Query: 26 DVNQFIYHGFNED-AQLQRDGLASVHSNGLLQLT----NTV-SPQQEGHAFYRLPIK-FN 78
+ + F + F + L++ G A+V S+G LQLT N V P+ G A Y PI ++
Sbjct: 3 NTDSFTFSKFKPNQPNLKKQGDATVTSSGTLQLTKVDKNGVPDPKSLGRALYASPINIWD 62
Query: 79 TXXXXXXXXXXNFVFAI----------GMAFVISPSKDLGKAEASPSEYLGLFNASNNGQ 128
+ +F F I G+AF ++P KA A +LGLF+ S
Sbjct: 63 SKTGVVASFATSFRFTIYAPNIATIADGLAFFLAPVSSPPKAGAG---FLGLFD-SAVFN 118
Query: 129 STNHILAIELDTVQNLDFDDIDDNHVGIDVNSLISHESAPAAYFSDREGMNKTLELIIGD 188
S+ +A+E DT +N F D D H+GIDVNS+ S ++ +L G+
Sbjct: 119 SSYQTVAVEFDTYENTVFLDPPDTHIGIDVNSIKSIKTV-------------KWDLANGE 165
Query: 189 PIQIWISYDGAEKLLNVTLAPMSIPKPTKPLLSRAINLSHILLETMYVGFSASTGSLK-- 246
++ I+YD + KLL L S T +LS ++L +L E + +GFSA+TG+
Sbjct: 166 AAKVLITYDSSAKLLVAALVYPS--SKTSFILSDVVDLKSVLPEWVSIGFSAATGASSGY 223
Query: 247 -SSHYVLGWSF 256
+H V WSF
Sbjct: 224 IETHDVFSWSF 234
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 123/272 (45%), Gaps = 28/272 (10%)
Query: 345 KGFKDKDVIGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLV 404
K K IG+G FG V G N ++AVK + +D+ + F+AE M +LRH NLV
Sbjct: 21 KELKLLQTIGKGEFGDVMLGDYRGN-KVAVKCIKNDATA--QAFLAEASVMTQLRHSNLV 77
Query: 405 KLRGY-CRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDW 463
+L G KG +V +YM GSL L + + L + V + YL +
Sbjct: 78 QLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN- 136
Query: 464 EQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGK 523
+HRD+ NVL+ D K+ DFGL + + + T KL + PE +R K
Sbjct: 137 --NFVHRDLAARNVLVSEDNVAKVSDFGLTK--EASSTQDTGKL--PVKWTAPEALREKK 190
Query: 524 ASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASDSRLEGI 582
ST +DV++FG+ + E+ S GR P + + V V+ KG DA D
Sbjct: 191 FSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE-------KGYKMDAPDG----- 238
Query: 583 CEEKQMELVLKLGLFCSHPKPEARPNMRQVMQ 614
C E++ C H RP+ Q+ +
Sbjct: 239 CPPAVYEVMKN----CWHLDAAMRPSFLQLRE 266
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 112/220 (50%), Gaps = 15/220 (6%)
Query: 349 DKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLR 407
D+ V+G+G +G VY G L++ V+IA+K++ + + E+ L+H+N+V+
Sbjct: 12 DRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYL 71
Query: 408 GYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRI-IRGVASGLLYLHEDWEQV 466
G G + + +P GSL +L + P + Q + + GL YLH++
Sbjct: 72 GSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ--- 128
Query: 467 VLHRDIKPANVLLDADLNG--KLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKA 524
++HRDIK NVL++ +G K+ DFG ++ P T GT YM PE++ G
Sbjct: 129 IVHRDIKGDNVLINT-YSGVLKISDFGTSKRL-AGINPCTETFTGTLQYMAPEIIDKGPR 186
Query: 525 --STSTDVYAFGVFMLEVASGRRPV----EQQGSMETVNL 558
+ D+++ G ++E+A+G+ P E Q +M V +
Sbjct: 187 GYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGM 226
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 101/204 (49%), Gaps = 12/204 (5%)
Query: 345 KGFKDKDVIGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLV 404
K K IG+G FG V G N ++AVK + +D+ + F+AE M +LRH NLV
Sbjct: 193 KELKLLQTIGKGEFGDVMLGDYRGN-KVAVKCIKNDATA--QAFLAEASVMTQLRHSNLV 249
Query: 405 KLRGY-CRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDW 463
+L G KG +V +YM GSL L + + L + V + YL +
Sbjct: 250 QLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN- 308
Query: 464 EQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGK 523
+HRD+ NVL+ D K+ DFGL + + + T KL + PE +R K
Sbjct: 309 --NFVHRDLAARNVLVSEDNVAKVSDFGLTK--EASSTQDTGKL--PVKWTAPEALREKK 362
Query: 524 ASTSTDVYAFGVFMLEVAS-GRRP 546
ST +DV++FG+ + E+ S GR P
Sbjct: 363 FSTKSDVWSFGILLWEIYSFGRVP 386
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 123/272 (45%), Gaps = 28/272 (10%)
Query: 345 KGFKDKDVIGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLV 404
K K IG+G FG V G N ++AVK + +D+ + F+AE M +LRH NLV
Sbjct: 6 KELKLLQTIGKGEFGDVMLGDYRGN-KVAVKCIKNDATA--QAFLAEASVMTQLRHSNLV 62
Query: 405 KLRGY-CRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDW 463
+L G KG +V +YM GSL L + + L + V + YL +
Sbjct: 63 QLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN- 121
Query: 464 EQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGK 523
+HRD+ NVL+ D K+ DFGL + + + T KL + PE +R K
Sbjct: 122 --NFVHRDLAARNVLVSEDNVAKVSDFGLTK--EASSTQDTGKL--PVKWTAPEALREKK 175
Query: 524 ASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASDSRLEGI 582
ST +DV++FG+ + E+ S GR P + + V V+ KG DA D
Sbjct: 176 FSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE-------KGYKMDAPDG----- 223
Query: 583 CEEKQMELVLKLGLFCSHPKPEARPNMRQVMQ 614
C E++ C H RP+ Q+ +
Sbjct: 224 CPPAVYEVMKN----CWHLDAAMRPSFLQLRE 251
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 131/283 (46%), Gaps = 23/283 (8%)
Query: 332 PQRFTYKDLYKATK-GFKDKDVIGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVA 390
PQ+ KD ++ + K + +G G FG+V+ + ++AVK + S ++ F+A
Sbjct: 174 PQKPWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLA 232
Query: 391 ELVSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIR 450
E M L+H LVKL ++ +++ ++M GSL L ++ +
Sbjct: 233 EANVMKTLQHDKLVKLHAVVTKEPIYIIT-EFMAKGSLLDFLKSDEGSKQPLPKLIDFSA 291
Query: 451 GVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGT 510
+A G+ ++ + + +HRD++ AN+L+ A L K+ DFGLAR+ + +
Sbjct: 292 QIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFP 348
Query: 511 FGYMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCDCWKKG 569
+ PE + G + +DV++FG+ ++E+ + GR P + E + ++
Sbjct: 349 IKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALE--------- 399
Query: 570 AIRDASDSRLEGICEEKQMELVLKLGLFCSHPKPEARPNMRQV 612
R R E C E+ ++++ C +PE RP +
Sbjct: 400 --RGYRMPRPEN-CPEELYNIMMR----CWKNRPEERPTFEYI 435
>pdb|3USU|A Chain A, Crystal Structure Of Butea Monosperma Seed Lectin
pdb|3USU|C Chain C, Crystal Structure Of Butea Monosperma Seed Lectin
pdb|3USU|E Chain E, Crystal Structure Of Butea Monosperma Seed Lectin
pdb|3USU|G Chain G, Crystal Structure Of Butea Monosperma Seed Lectin
Length = 256
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 122/253 (48%), Gaps = 41/253 (16%)
Query: 25 QDVNQFIYHGFNED-AQLQRDGLASVHSNGLLQLT----NTV-SPQQEGHAFYRLPIK-F 77
+ + F + F + L++ G A+V S+G LQLT N V P+ G A Y PI +
Sbjct: 2 TNTDSFTFSKFKPNQPNLKKQGDATVTSSGTLQLTKVDKNGVPDPKSLGRALYASPINIW 61
Query: 78 NTXXXXXXXXXXNFVFAI----------GMAFVISPSKDLGKAEASPSEYLGLFNASNNG 127
++ +F F I G+AF ++P KA A +LGLF+ S
Sbjct: 62 DSKTGVVASFATSFRFTIYAPNIATIADGLAFFLAPVSSPPKAGAG---FLGLFD-SAVF 117
Query: 128 QSTNHILAIELDTVQNLDFDDIDDNHVGIDVNSLISHESAPAAYFSDREGMNKTLELIIG 187
S+ +A+E DT +N F D D H+GIDVNS+ S ++ +L G
Sbjct: 118 NSSYQTVAVEFDTYENTVFLDPPDTHIGIDVNSIKSIKTV-------------KWDLANG 164
Query: 188 DPIQIWISYDGAEKLLNVTLAPMSIPKP-TKPLLSRAINLSHILLETMYVGFSASTGSLK 246
+ ++ I+YD + KLL +A + P T +LS ++L +L E + +GFSA+TG+
Sbjct: 165 EAAKVLITYDSSAKLL---VAALVYPSSKTSFILSDVVDLKSVLPEWVSIGFSAATGASS 221
Query: 247 ---SSHYVLGWSF 256
+H V WSF
Sbjct: 222 GYIETHDVFSWSF 234
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 106/211 (50%), Gaps = 23/211 (10%)
Query: 347 FKDKDVIGRGGFGKVYRGVLAS----NVQIAVKKV---SHDSKQGIKEFVAELVSMGRLR 399
+K D +G GG VY LA N+++A+K + + ++ +K F E+ + +L
Sbjct: 13 YKIVDKLGGGGMSTVY---LAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLS 69
Query: 400 HRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTN----IKPCLNWYQRFRIIRGVASG 455
H+N+V + + LV +Y+ +L + + ++ + +N+ + + G
Sbjct: 70 HQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQ------ILDG 123
Query: 456 LLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMD 515
+ + H+ ++HRDIKP N+L+D++ K+ DFG+A+ ++ QT ++GT Y
Sbjct: 124 IKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFS 180
Query: 516 PELMRTGKASTSTDVYAFGVFMLEVASGRRP 546
PE + TD+Y+ G+ + E+ G P
Sbjct: 181 PEQAKGEATDECTDIYSIGIVLYEMLVGEPP 211
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 122/272 (44%), Gaps = 28/272 (10%)
Query: 345 KGFKDKDVIGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLV 404
K K IG+G FG V G N ++AVK + +D+ + F+AE M +LRH NLV
Sbjct: 12 KELKLLQTIGKGEFGDVMLGDYRGN-KVAVKCIKNDATA--QAFLAEASVMTQLRHSNLV 68
Query: 405 KLRGY-CRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDW 463
+L G KG +V +YM GSL L + + L + V + YL +
Sbjct: 69 QLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN- 127
Query: 464 EQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGK 523
+HRD+ NVL+ D K+ DFGL + + + T KL + PE +R
Sbjct: 128 --NFVHRDLAARNVLVSEDNVAKVSDFGLTK--EASSTQDTGKL--PVKWTAPEALREAA 181
Query: 524 ASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASDSRLEGI 582
ST +DV++FG+ + E+ S GR P + + V V+ KG DA D
Sbjct: 182 FSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE-------KGYKMDAPDG----- 229
Query: 583 CEEKQMELVLKLGLFCSHPKPEARPNMRQVMQ 614
C E++ C H RP+ Q+ +
Sbjct: 230 CPPAVYEVMKN----CWHLDAAMRPSFLQLRE 257
>pdb|1G8W|A Chain A, Improved Structure Of Phytohemagglutinin-L From The Kidney
Bean
pdb|1G8W|B Chain B, Improved Structure Of Phytohemagglutinin-L From The Kidney
Bean
pdb|1G8W|C Chain C, Improved Structure Of Phytohemagglutinin-L From The Kidney
Bean
pdb|1G8W|D Chain D, Improved Structure Of Phytohemagglutinin-L From The Kidney
Bean
Length = 233
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 119/247 (48%), Gaps = 44/247 (17%)
Query: 30 FIYHGFNE-DAQLQRDGLASVHSNGLLQLTNTVSPQQE-----GHAFYRLPIK-FNTXXX 82
F + FNE + LQRD ASV S+G L+LTN + G AFY PI+ ++
Sbjct: 6 FNFQRFNETNLILQRD--ASVSSSGQLRLTNLNGNGEPRVGSLGRAFYSAPIQIWDNTTG 63
Query: 83 XXXXXXXNFVFAI----------GMAFVISPSKDLGKAEASPSEYLGLFNASNNGQSTNH 132
+F F I G+AF + P +G +LGLF+ SN S H
Sbjct: 64 TVASFATSFTFNIQVPNNAGPADGLAFALVP---VGSQPKDKGGFLGLFDGSN---SNFH 117
Query: 133 ILAIELDTVQNLDFDDIDDNHVGIDVNSLISHESAPAAYFSDREGMNKTLELIIGDPIQI 192
+A+E DT+ N D+D + H+GIDVNS+ R + + G+ ++
Sbjct: 118 TVAVEFDTLYNKDWDPT-ERHIGIDVNSI-------------RSIKTTRWDFVNGENAEV 163
Query: 193 WISYDGAEKLLNVTLAPMSIPKPTKPLLSRAINLSHILLETMYVGFSASTGSLKS---SH 249
I+YD + LL +L S + T ++S ++L +L E + VGFSA+TG K ++
Sbjct: 164 LITYDSSTNLLVASLVYPS--QKTSFIVSDTVDLKSVLPEWVSVGFSATTGINKGNVETN 221
Query: 250 YVLGWSF 256
VL WSF
Sbjct: 222 DVLSWSF 228
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 106/217 (48%), Gaps = 9/217 (4%)
Query: 347 FKDKDVIGRGGFGKVYRG-VLASNVQIAVKKVSHDS--KQGIKEFVAELVSMG-RLRHRN 402
FK +++G+G F VYR + + +++A+K + + K G+ + V V + +L+H +
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPS 72
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHED 462
+++L Y LV + NG +++ L +KP R + + +G+LYLH
Sbjct: 73 ILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEAR-HFMHQIITGMLYLHSH 131
Query: 463 WEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTG 522
+LHRD+ +N+LL ++N K+ DFGLA T L GT Y+ PE+
Sbjct: 132 G---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT-LCGTPNYISPEIATRS 187
Query: 523 KASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLV 559
+DV++ G + GR P + T+N V
Sbjct: 188 AHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKV 224
>pdb|1FAT|A Chain A, Phytohemagglutinin-L
pdb|1FAT|B Chain B, Phytohemagglutinin-L
pdb|1FAT|C Chain C, Phytohemagglutinin-L
pdb|1FAT|D Chain D, Phytohemagglutinin-L
Length = 252
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 119/247 (48%), Gaps = 44/247 (17%)
Query: 30 FIYHGFNE-DAQLQRDGLASVHSNGLLQLTNTVSPQQE-----GHAFYRLPIK-FNTXXX 82
F + FNE + LQRD ASV S+G L+LTN + G AFY PI+ ++
Sbjct: 6 FNFQRFNETNLILQRD--ASVSSSGQLRLTNLNGNGEPRVGSLGRAFYSAPIQIWDNTTG 63
Query: 83 XXXXXXXNFVFAI----------GMAFVISPSKDLGKAEASPSEYLGLFNASNNGQSTNH 132
+F F I G+AF + P +G +LGLF+ SN S H
Sbjct: 64 TVASFATSFTFNIQVPNNAGPADGLAFALVP---VGSQPKDKGGFLGLFDGSN---SNFH 117
Query: 133 ILAIELDTVQNLDFDDIDDNHVGIDVNSLISHESAPAAYFSDREGMNKTLELIIGDPIQI 192
+A+E DT+ N D+D + H+GIDVNS+ R + + G+ ++
Sbjct: 118 TVAVEFDTLYNKDWDPT-ERHIGIDVNSI-------------RSIKTTRWDFVNGENAEV 163
Query: 193 WISYDGAEKLLNVTLAPMSIPKPTKPLLSRAINLSHILLETMYVGFSASTGSLK---SSH 249
I+YD + LL +L S + T ++S ++L +L E + VGFSA+TG K ++
Sbjct: 164 LITYDSSTNLLVASLVYPS--QKTSFIVSDTVDLKSVLPEWVSVGFSATTGINKGNVETN 221
Query: 250 YVLGWSF 256
VL WSF
Sbjct: 222 DVLSWSF 228
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 126/268 (47%), Gaps = 29/268 (10%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCRR 412
+G G G+V+ G + ++AVK + S F+AE M +L+H+ LV+L +
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 413 KGEFLLVYDYMPNGSLDKILHT--NIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHR 470
+ +++ +YM NGSL L T IK +N + + +A G+ ++ E + +HR
Sbjct: 80 EPIYIIT-EYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEE---RNYIHR 133
Query: 471 DIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDV 530
D++ AN+L+ L+ K+ DFGLARL + + PE + G + +DV
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDV 193
Query: 531 YAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASDSRLEGICEEKQME 589
++FG+ + E+ + GR P + E + ++ R R + EE
Sbjct: 194 WSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-----------RGYRMVRPDNCPEE---- 238
Query: 590 LVLKLGLFCSHPKPEARPN---MRQVMQ 614
+ +L C +PE RP +R V++
Sbjct: 239 -LYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 130/282 (46%), Gaps = 23/282 (8%)
Query: 333 QRFTYKDLYKATK-GFKDKDVIGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAE 391
Q+ KD ++ + K + +G G FG+V+ + ++AVK + S ++ F+AE
Sbjct: 2 QKPWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAE 60
Query: 392 LVSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRG 451
M L+H LVKL ++ +++ ++M GSL L ++ +
Sbjct: 61 ANVMKTLQHDKLVKLHAVVTKEPIYIIT-EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQ 119
Query: 452 VASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTF 511
+A G+ ++ + + +HRD++ AN+L+ A L K+ DFGLAR+ + +
Sbjct: 120 IAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPI 176
Query: 512 GYMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCDCWKKGA 570
+ PE + G + +DV++FG+ ++E+ + GR P + E + ++
Sbjct: 177 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALE---------- 226
Query: 571 IRDASDSRLEGICEEKQMELVLKLGLFCSHPKPEARPNMRQV 612
R R E C E+ ++++ C +PE RP +
Sbjct: 227 -RGYRMPRPEN-CPEELYNIMMR----CWKNRPEERPTFEYI 262
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 94/206 (45%), Gaps = 6/206 (2%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCRR 412
+G G FG V G +A+K + S EF+ E M L H LV+L G C +
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 74
Query: 413 KGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDI 472
+ ++ +YM NG L L ++ Q + + V + YL + LHRD+
Sbjct: 75 QRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDL 130
Query: 473 KPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDVYA 532
N L++ K+ DFGL+R D + + PE++ K S+ +D++A
Sbjct: 131 AARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 190
Query: 533 FGVFMLEVAS-GRRPVEQQGSMETVN 557
FGV M E+ S G+ P E+ + ET
Sbjct: 191 FGVLMWEIYSLGKMPYERFTNSETAE 216
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 94/204 (46%), Gaps = 6/204 (2%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCRR 412
+G G FG V G +A+K + S EF+ E M L H LV+L G C +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 413 KGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDI 472
+ ++ +YM NG L L ++ Q + + V + YL + LHRD+
Sbjct: 76 QRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDL 131
Query: 473 KPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDVYA 532
N L++ K+ DFGL+R D + + PE++ K S+ +D++A
Sbjct: 132 AARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 191
Query: 533 FGVFMLEVAS-GRRPVEQQGSMET 555
FGV M E+ S G+ P E+ + ET
Sbjct: 192 FGVLMWEIYSLGKMPYERFTNSET 215
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 112/223 (50%), Gaps = 35/223 (15%)
Query: 347 FKDKDVIGRGGFGKVYRGVLASNVQI-AVKKVSHDSKQGIKEFVAELVSMGRLRH----- 400
F++ V+G+G FG+V + A + + A+KK+ H +++ + ++E++ + L H
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH-TEEKLSTILSEVMLLASLNHQYVVR 66
Query: 401 --------RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHT-NIKPCLNWYQRFRIIRG 451
RN VK ++K + +Y NG+L ++H+ N+ + Y +R+ R
Sbjct: 67 YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEY--WRLFRQ 124
Query: 452 VASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR---------LYDHDTIP 502
+ L Y+H Q ++HRD+KP N+ +D N K+GDFGLA+ D +P
Sbjct: 125 ILEALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLP 181
Query: 503 QT----TKLVGTFGYMDPELMR-TGKASTSTDVYAFGVFMLEV 540
+ T +GT Y+ E++ TG + D+Y+ G+ E+
Sbjct: 182 GSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM 224
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 94/206 (45%), Gaps = 6/206 (2%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCRR 412
+G G FG V G +A+K + S EF+ E M L H LV+L G C +
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 413 KGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDI 472
+ ++ +YM NG L L ++ Q + + V + YL + LHRD+
Sbjct: 91 QRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDL 146
Query: 473 KPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDVYA 532
N L++ K+ DFGL+R D + + PE++ K S+ +D++A
Sbjct: 147 AARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 206
Query: 533 FGVFMLEVAS-GRRPVEQQGSMETVN 557
FGV M E+ S G+ P E+ + ET
Sbjct: 207 FGVLMWEIYSLGKMPYERFTNSETAE 232
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 94/204 (46%), Gaps = 6/204 (2%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCRR 412
+G G FG V G +A+K + S EF+ E M L H LV+L G C +
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 70
Query: 413 KGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDI 472
+ ++ +YM NG L L ++ Q + + V + YL + LHRD+
Sbjct: 71 QRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDL 126
Query: 473 KPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDVYA 532
N L++ K+ DFGL+R D + + PE++ K S+ +D++A
Sbjct: 127 AARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 186
Query: 533 FGVFMLEVAS-GRRPVEQQGSMET 555
FGV M E+ S G+ P E+ + ET
Sbjct: 187 FGVLMWEIYSLGKMPYERFTNSET 210
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 98/208 (47%), Gaps = 10/208 (4%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCRR 412
+G G FG V G +A+K + S EF+ E M L H LV+L G C +
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 413 KGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDI 472
+ ++ +YM NG L L ++ Q + + V + YL + LHRD+
Sbjct: 91 QRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDL 146
Query: 473 KPANVLLDADLNGKLGDFGLAR--LYDHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDV 530
N L++ K+ DFGL+R L D +T +K + PE++ K S+ +D+
Sbjct: 147 AARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKF--PVRWSPPEVLMYSKFSSKSDI 204
Query: 531 YAFGVFMLEVAS-GRRPVEQQGSMETVN 557
+AFGV M E+ S G+ P E+ + ET
Sbjct: 205 WAFGVLMWEIYSLGKMPYERFTNSETAE 232
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 94/206 (45%), Gaps = 6/206 (2%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCRR 412
+G G FG V G +A+K + S EF+ E M L H LV+L G C +
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 81
Query: 413 KGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDI 472
+ ++ +YM NG L L ++ Q + + V + YL + LHRD+
Sbjct: 82 QRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDL 137
Query: 473 KPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDVYA 532
N L++ K+ DFGL+R D + + PE++ K S+ +D++A
Sbjct: 138 AARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 197
Query: 533 FGVFMLEVAS-GRRPVEQQGSMETVN 557
FGV M E+ S G+ P E+ + ET
Sbjct: 198 FGVLMWEIYSLGKMPYERFTNSETAE 223
>pdb|3IPV|B Chain B, Crystal Structure Of Spatholobus Parviflorus Seed Lectin
pdb|3IPV|D Chain D, Crystal Structure Of Spatholobus Parviflorus Seed Lectin
Length = 239
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 112/235 (47%), Gaps = 40/235 (17%)
Query: 41 LQRDGLASVHSNGLLQLTNTVS-----PQQEGHAFYRLPIK-FNTXXXXXXXXXXNFVFA 94
LQ D L +V G+LQLTN S P G A Y PI +++ +F F
Sbjct: 20 LQGDALVTVA--GVLQLTNVDSNGVPEPSSLGRATYSAPINIWDSATGLVASFATSFRFT 77
Query: 95 I----------GMAFVISPSKDLGKAEASPSEYLGLFNASNNGQSTNHILAIELDTVQNL 144
I G+AF ++P + A S +LGLF+ S G +T +A+E DT +N
Sbjct: 78 IYAPNIATIADGLAFFLAP---VASAPDSGGGFLGLFD-SAVGDTTYQTVAVEFDTYENT 133
Query: 145 DFDDIDDNHVGIDVNSLISHESAPAAYFSDREGMNKTLELIIGDPIQIWISYDGAEKLLN 204
F D H+G DVNS+ S ++ L G+ ++ I+Y+ A KLL
Sbjct: 134 VFTDPPYTHIGFDVNSISSIKTV-------------KWSLANGEAAKVLITYNSAVKLLV 180
Query: 205 VTLAPMSIPKPTKPLLSRAINLSHILLETMYVGFSASTGSLKS---SHYVLGWSF 256
+L S T +L+ ++LS +L E + VGFSA+TG+ K +H V WSF
Sbjct: 181 ASLVYPS--SKTSFILADIVDLSSVLPEWVRVGFSAATGASKGYIETHDVFSWSF 233
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 100/201 (49%), Gaps = 12/201 (5%)
Query: 352 VIGRGGFGKVYRGVLASNVQIAV-KKVSHDSKQGIKE--FVAELVSMGRLRHRNLVKL-- 406
IG G +G+ + S+ +I V K++ + S ++ V+E+ + L+H N+V+
Sbjct: 13 TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYD 72
Query: 407 RGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHE----- 461
R R +V +Y G L ++ K + F ++R + L L E
Sbjct: 73 RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEF-VLRVMTQLTLALKECHRRS 131
Query: 462 DWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRT 521
D VLHRD+KPANV LD N KLGDFGLAR+ +HDT T VGT YM PE M
Sbjct: 132 DGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKT-FVGTPYYMSPEQMNR 190
Query: 522 GKASTSTDVYAFGVFMLEVAS 542
+ +D+++ G + E+ +
Sbjct: 191 MSYNEKSDIWSLGCLLYELCA 211
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 94/206 (45%), Gaps = 6/206 (2%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCRR 412
+G G FG V G +A+K + S EF+ E M L H LV+L G C +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 413 KGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDI 472
+ ++ +YM NG L L ++ Q + + V + YL + LHRD+
Sbjct: 76 QRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDL 131
Query: 473 KPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDVYA 532
N L++ K+ DFGL+R D + + PE++ K S+ +D++A
Sbjct: 132 AARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWA 191
Query: 533 FGVFMLEVAS-GRRPVEQQGSMETVN 557
FGV M E+ S G+ P E+ + ET
Sbjct: 192 FGVLMWEIYSLGKMPYERFTNSETAE 217
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 130/283 (45%), Gaps = 33/283 (11%)
Query: 332 PQRFTYKDLYKATK-GFKDKDVIGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVA 390
PQ+ KD ++ + K + +G G FG+V+ + ++AVK + S ++ F+A
Sbjct: 168 PQKPWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLA 226
Query: 391 ELVSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIR 450
E M L+H LVKL ++ +++ ++M GSL L ++ +
Sbjct: 227 EANVMKTLQHDKLVKLHAVVTKEPIYIIT-EFMAKGSLLDFLKSDEGSKQPLPKLIDFSA 285
Query: 451 GVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGT 510
+A G+ ++ + + +HRD++ AN+L+ A L K+ DFGLAR+ I T
Sbjct: 286 QIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVGAKFPIKWTA----- 337
Query: 511 FGYMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCDCWKKG 569
PE + G + +DV++FG+ ++E+ + GR P + E + ++
Sbjct: 338 -----PEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALE--------- 383
Query: 570 AIRDASDSRLEGICEEKQMELVLKLGLFCSHPKPEARPNMRQV 612
R R E C E+ ++++ C +PE RP +
Sbjct: 384 --RGYRMPRPEN-CPEELYNIMMR----CWKNRPEERPTFEYI 419
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 128/277 (46%), Gaps = 36/277 (12%)
Query: 353 IGRGGFGKVYRGVLASNVQ-IAVKKVSHDSKQG-------IKEFVAELVSMGRLRHRNLV 404
IG+GGFG V++G L + +A+K + +G +EF E+ M L H N+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 405 KLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWE 464
KL G +V +++P G L L P + W + R++ +A G+ Y+ ++
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHP-IKWSVKLRLMLDIALGIEYM-QNQN 142
Query: 465 QVVLHRDIKPANVLL-----DADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELM 519
++HRD++ N+ L +A + K+ DFGL++ ++ + L+G F +M PE +
Sbjct: 143 PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ----QSVHSVSGLLGNFQWMAPETI 198
Query: 520 RTGKASTS--TDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASDS 577
+ S + D Y+F + + + +G P ++ S + ++ + + + I +
Sbjct: 199 GAEEESYTEKADTYSFAMILYTILTGEGPFDEY-SYGKIKFINMIREEGLRPTIPEDCPP 257
Query: 578 RLEGICEEKQMELVLKLGLFCSHPKPEARPNMRQVMQ 614
RL + E C P+ RP+ +++
Sbjct: 258 RLRNVIE------------LCWSGDPKKRPHFSYIVK 282
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 99/201 (49%), Gaps = 12/201 (5%)
Query: 352 VIGRGGFGKVYRGVLASNVQIAV-KKVSHDSKQGIKE--FVAELVSMGRLRHRNLVKL-- 406
IG G +G+ + S+ +I V K++ + S ++ V+E+ + L+H N+V+
Sbjct: 13 TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYD 72
Query: 407 RGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHE----- 461
R R +V +Y G L ++ K + F ++R + L L E
Sbjct: 73 RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEF-VLRVMTQLTLALKECHRRS 131
Query: 462 DWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRT 521
D VLHRD+KPANV LD N KLGDFGLAR+ +HDT VGT YM PE M
Sbjct: 132 DGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDT-SFAKAFVGTPYYMSPEQMNR 190
Query: 522 GKASTSTDVYAFGVFMLEVAS 542
+ +D+++ G + E+ +
Sbjct: 191 MSYNEKSDIWSLGCLLYELCA 211
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 112/242 (46%), Gaps = 28/242 (11%)
Query: 350 KDVIGRGGFGKVYRGVLA-SNVQIAVKKVSHD-SKQGIKEFVAELVSMGRLRHRNLVKLR 407
K+ +G GGFG V R + + Q+A+K+ + S + + + E+ M +L H N+V R
Sbjct: 19 KERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAR 78
Query: 408 GYCRRKGEF------LLVYDYMPNGSLDKILHTNIKPC-LNWYQRFRIIRGVASGLLYLH 460
+ LL +Y G L K L+ C L ++ ++S L YLH
Sbjct: 79 EVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH 138
Query: 461 EDWEQVVLHRDIKPANVLLDA---DLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPE 517
E+ ++HRD+KP N++L L K+ D G A+ D + T+ VGT Y+ PE
Sbjct: 139 EN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL--CTEFVGTLQYLAPE 193
Query: 518 LMRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASDS 577
L+ K + + D ++FG E +G RP L +W W G +R+ S+
Sbjct: 194 LLEQKKYTVTVDYWSFGTLAFECITGFRPF----------LPNWQPVQW-HGKVREKSNE 242
Query: 578 RL 579
+
Sbjct: 243 HI 244
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 112/242 (46%), Gaps = 28/242 (11%)
Query: 350 KDVIGRGGFGKVYRGVLA-SNVQIAVKKVSHD-SKQGIKEFVAELVSMGRLRHRNLVKLR 407
K+ +G GGFG V R + + Q+A+K+ + S + + + E+ M +L H N+V R
Sbjct: 20 KERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAR 79
Query: 408 GYCRRKGEF------LLVYDYMPNGSLDKILHTNIKPC-LNWYQRFRIIRGVASGLLYLH 460
+ LL +Y G L K L+ C L ++ ++S L YLH
Sbjct: 80 EVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH 139
Query: 461 EDWEQVVLHRDIKPANVLLDA---DLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPE 517
E+ ++HRD+KP N++L L K+ D G A+ D + T+ VGT Y+ PE
Sbjct: 140 EN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL--CTEFVGTLQYLAPE 194
Query: 518 LMRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASDS 577
L+ K + + D ++FG E +G RP L +W W G +R+ S+
Sbjct: 195 LLEQKKYTVTVDYWSFGTLAFECITGFRPF----------LPNWQPVQW-HGKVREKSNE 243
Query: 578 RL 579
+
Sbjct: 244 HI 245
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 118/242 (48%), Gaps = 35/242 (14%)
Query: 347 FKDKDVI-----GRGGFGKVYRGVLAS------NVQIAVKKVSHDSKQGIKEFVAELVSM 395
K +D++ G G FGKV+ + + +AVK + S+ ++F E +
Sbjct: 38 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELL 97
Query: 396 GRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHT------------NIKPC-LNW 442
L+H+++V+ G C L+V++YM +G L++ L + ++ P L
Sbjct: 98 TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL 157
Query: 443 YQRFRIIRGVASGLLY---LHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDH 498
Q + VA+G++Y LH +HRD+ N L+ L K+GDFG++R +Y
Sbjct: 158 GQLLAVASQVAAGMVYLAGLH------FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYST 211
Query: 499 DTIPQTTKLVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVN 557
D + + +M PE + K +T +DV++FGV + E+ + G++P Q + E ++
Sbjct: 212 DYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAID 271
Query: 558 LV 559
+
Sbjct: 272 CI 273
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 118/242 (48%), Gaps = 35/242 (14%)
Query: 347 FKDKDVI-----GRGGFGKVYRGVLAS------NVQIAVKKVSHDSKQGIKEFVAELVSM 395
K +D++ G G FGKV+ + + +AVK + S+ ++F E +
Sbjct: 9 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELL 68
Query: 396 GRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHT------------NIKPC-LNW 442
L+H+++V+ G C L+V++YM +G L++ L + ++ P L
Sbjct: 69 TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL 128
Query: 443 YQRFRIIRGVASGLLY---LHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDH 498
Q + VA+G++Y LH +HRD+ N L+ L K+GDFG++R +Y
Sbjct: 129 GQLLAVASQVAAGMVYLAGLH------FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYST 182
Query: 499 DTIPQTTKLVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVN 557
D + + +M PE + K +T +DV++FGV + E+ + G++P Q + E ++
Sbjct: 183 DYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAID 242
Query: 558 LV 559
+
Sbjct: 243 CI 244
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 118/242 (48%), Gaps = 35/242 (14%)
Query: 347 FKDKDVI-----GRGGFGKVYRGVLAS------NVQIAVKKVSHDSKQGIKEFVAELVSM 395
K +D++ G G FGKV+ + + +AVK + S+ ++F E +
Sbjct: 15 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELL 74
Query: 396 GRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHT------------NIKPC-LNW 442
L+H+++V+ G C L+V++YM +G L++ L + ++ P L
Sbjct: 75 TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL 134
Query: 443 YQRFRIIRGVASGLLY---LHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDH 498
Q + VA+G++Y LH +HRD+ N L+ L K+GDFG++R +Y
Sbjct: 135 GQLLAVASQVAAGMVYLAGLH------FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYST 188
Query: 499 DTIPQTTKLVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVN 557
D + + +M PE + K +T +DV++FGV + E+ + G++P Q + E ++
Sbjct: 189 DYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAID 248
Query: 558 LV 559
+
Sbjct: 249 CI 250
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 111/223 (49%), Gaps = 35/223 (15%)
Query: 347 FKDKDVIGRGGFGKVYRGVLASNVQI-AVKKVSHDSKQGIKEFVAELVSMGRLRH----- 400
F++ V+G+G FG+V + A + + A+KK+ H +++ + ++E++ + L H
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH-TEEKLSTILSEVMLLASLNHQYVVR 66
Query: 401 --------RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHT-NIKPCLNWYQRFRIIRG 451
RN VK ++K + +Y N +L ++H+ N+ + Y +R+ R
Sbjct: 67 YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEY--WRLFRQ 124
Query: 452 VASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR---------LYDHDTIP 502
+ L Y+H Q ++HRD+KP N+ +D N K+GDFGLA+ D +P
Sbjct: 125 ILEALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLP 181
Query: 503 QT----TKLVGTFGYMDPELMR-TGKASTSTDVYAFGVFMLEV 540
+ T +GT Y+ E++ TG + D+Y+ G+ E+
Sbjct: 182 GSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM 224
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 101/198 (51%), Gaps = 15/198 (7%)
Query: 353 IGRGGFGKVYR---GVLASNVQ--IAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLR 407
+G+G FG V L N +AVKK+ H +++ +++F E+ + L+H N+VK +
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 408 GYCRRKGE--FLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQ 465
G C G L+ +Y+P GSL L + K ++ + + + G+ YL +
Sbjct: 84 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYL---GTK 139
Query: 466 VVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG---TFGYMDPELMRTG 522
+HRD+ N+L++ + K+GDFGL ++ D K G F Y PE +
Sbjct: 140 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTES 198
Query: 523 KASTSTDVYAFGVFMLEV 540
K S ++DV++FGV + E+
Sbjct: 199 KFSVASDVWSFGVVLYEL 216
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 101/198 (51%), Gaps = 15/198 (7%)
Query: 353 IGRGGFGKVYR---GVLASNVQ--IAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLR 407
+G+G FG V L N +AVKK+ H +++ +++F E+ + L+H N+VK +
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 408 GYCRRKGE--FLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQ 465
G C G L+ +Y+P GSL L + K ++ + + + G+ YL +
Sbjct: 77 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYL---GTK 132
Query: 466 VVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG---TFGYMDPELMRTG 522
+HRD+ N+L++ + K+GDFGL ++ D K G F Y PE +
Sbjct: 133 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTES 191
Query: 523 KASTSTDVYAFGVFMLEV 540
K S ++DV++FGV + E+
Sbjct: 192 KFSVASDVWSFGVVLYEL 209
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 101/198 (51%), Gaps = 15/198 (7%)
Query: 353 IGRGGFGKVYR---GVLASNVQ--IAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLR 407
+G+G FG V L N +AVKK+ H +++ +++F E+ + L+H N+VK +
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 408 GYCRRKGE--FLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQ 465
G C G L+ +Y+P GSL L + K ++ + + + G+ YL +
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYL---GTK 136
Query: 466 VVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG---TFGYMDPELMRTG 522
+HRD+ N+L++ + K+GDFGL ++ D K G F Y PE +
Sbjct: 137 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTES 195
Query: 523 KASTSTDVYAFGVFMLEV 540
K S ++DV++FGV + E+
Sbjct: 196 KFSVASDVWSFGVVLYEL 213
>pdb|3IPV|A Chain A, Crystal Structure Of Spatholobus Parviflorus Seed Lectin
pdb|3IPV|C Chain C, Crystal Structure Of Spatholobus Parviflorus Seed Lectin
Length = 251
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 112/235 (47%), Gaps = 40/235 (17%)
Query: 41 LQRDGLASVHSNGLLQLTNT-----VSPQQEGHAFYRLPIK-FNTXXXXXXXXXXNFVFA 94
LQ D L +V G+LQLTN P G A Y PI +++ +F F
Sbjct: 20 LQGDALVTVA--GVLQLTNVDKNGVPEPSSLGRATYSAPINIWDSATGLVASFATSFRFT 77
Query: 95 I----------GMAFVISPSKDLGKAEASPSEYLGLFNASNNGQSTNHILAIELDTVQNL 144
I G+AF ++P + A S +LGLF+++ +G ST +A+E DT +N
Sbjct: 78 IYAPNIATIADGLAFFLAP---VASAPDSGGGFLGLFDSAVSG-STYQTVAVEFDTYENT 133
Query: 145 DFDDIDDNHVGIDVNSLISHESAPAAYFSDREGMNKTLELIIGDPIQIWISYDGAEKLLN 204
F D H+G DVNS+ S ++ L G+ ++ I+Y+ A KLL
Sbjct: 134 VFTDPPYTHIGFDVNSISSIKTV-------------KWSLANGEAAKVLITYNSAVKLLV 180
Query: 205 VTLAPMSIPKPTKPLLSRAINLSHILLETMYVGFSASTGSLKS---SHYVLGWSF 256
+L S T +L+ ++LS +L E + VGFSA+TG+ +H V WSF
Sbjct: 181 ASLVYPS--SKTSFILADIVDLSSVLPEWVRVGFSAATGASGGKIETHDVFSWSF 233
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 101/198 (51%), Gaps = 15/198 (7%)
Query: 353 IGRGGFGKVYR---GVLASNVQ--IAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLR 407
+G+G FG V L N +AVKK+ H +++ +++F E+ + L+H N+VK +
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 408 GYCRRKGE--FLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQ 465
G C G L+ +Y+P GSL L + K ++ + + + G+ YL +
Sbjct: 83 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYL---GTK 138
Query: 466 VVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG---TFGYMDPELMRTG 522
+HRD+ N+L++ + K+GDFGL ++ D K G F Y PE +
Sbjct: 139 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTES 197
Query: 523 KASTSTDVYAFGVFMLEV 540
K S ++DV++FGV + E+
Sbjct: 198 KFSVASDVWSFGVVLYEL 215
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 101/198 (51%), Gaps = 15/198 (7%)
Query: 353 IGRGGFGKVYR---GVLASNVQ--IAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLR 407
+G+G FG V L N +AVKK+ H +++ +++F E+ + L+H N+VK +
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 408 GYCRRKGE--FLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQ 465
G C G L+ +Y+P GSL L + K ++ + + + G+ YL +
Sbjct: 85 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYL---GTK 140
Query: 466 VVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG---TFGYMDPELMRTG 522
+HRD+ N+L++ + K+GDFGL ++ D K G F Y PE +
Sbjct: 141 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTES 199
Query: 523 KASTSTDVYAFGVFMLEV 540
K S ++DV++FGV + E+
Sbjct: 200 KFSVASDVWSFGVVLYEL 217
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 101/198 (51%), Gaps = 15/198 (7%)
Query: 353 IGRGGFGKVYR---GVLASNVQ--IAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLR 407
+G+G FG V L N +AVKK+ H +++ +++F E+ + L+H N+VK +
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 408 GYCRRKGE--FLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQ 465
G C G L+ +Y+P GSL L + K ++ + + + G+ YL +
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYL---GTK 164
Query: 466 VVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG---TFGYMDPELMRTG 522
+HRD+ N+L++ + K+GDFGL ++ D K G F Y PE +
Sbjct: 165 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTES 223
Query: 523 KASTSTDVYAFGVFMLEV 540
K S ++DV++FGV + E+
Sbjct: 224 KFSVASDVWSFGVVLYEL 241
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 101/198 (51%), Gaps = 15/198 (7%)
Query: 353 IGRGGFGKVYR---GVLASNVQ--IAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLR 407
+G+G FG V L N +AVKK+ H +++ +++F E+ + L+H N+VK +
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 408 GYCRRKGE--FLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQ 465
G C G L+ +Y+P GSL L + K ++ + + + G+ YL +
Sbjct: 82 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYL---GTK 137
Query: 466 VVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG---TFGYMDPELMRTG 522
+HRD+ N+L++ + K+GDFGL ++ D K G F Y PE +
Sbjct: 138 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTES 196
Query: 523 KASTSTDVYAFGVFMLEV 540
K S ++DV++FGV + E+
Sbjct: 197 KFSVASDVWSFGVVLYEL 214
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 101/198 (51%), Gaps = 15/198 (7%)
Query: 353 IGRGGFGKVYR---GVLASNVQ--IAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLR 407
+G+G FG V L N +AVKK+ H +++ +++F E+ + L+H N+VK +
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 408 GYCRRKGE--FLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQ 465
G C G L+ +Y+P GSL L + K ++ + + + G+ YL +
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYL---GTK 131
Query: 466 VVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG---TFGYMDPELMRTG 522
+HRD+ N+L++ + K+GDFGL ++ D K G F Y PE +
Sbjct: 132 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTES 190
Query: 523 KASTSTDVYAFGVFMLEV 540
K S ++DV++FGV + E+
Sbjct: 191 KFSVASDVWSFGVVLYEL 208
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 101/198 (51%), Gaps = 15/198 (7%)
Query: 353 IGRGGFGKVYR---GVLASNVQ--IAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLR 407
+G+G FG V L N +AVKK+ H +++ +++F E+ + L+H N+VK +
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 408 GYCRRKGE--FLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQ 465
G C G L+ +Y+P GSL L + K ++ + + + G+ YL +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYL---GTK 133
Query: 466 VVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG---TFGYMDPELMRTG 522
+HRD+ N+L++ + K+GDFGL ++ D K G F Y PE +
Sbjct: 134 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTES 192
Query: 523 KASTSTDVYAFGVFMLEV 540
K S ++DV++FGV + E+
Sbjct: 193 KFSVASDVWSFGVVLYEL 210
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 101/198 (51%), Gaps = 15/198 (7%)
Query: 353 IGRGGFGKVYR---GVLASNVQ--IAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLR 407
+G+G FG V L N +AVKK+ H +++ +++F E+ + L+H N+VK +
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 408 GYCRRKGE--FLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQ 465
G C G L+ +Y+P GSL L + K ++ + + + G+ YL +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYL---GTK 133
Query: 466 VVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG---TFGYMDPELMRTG 522
+HRD+ N+L++ + K+GDFGL ++ D K G F Y PE +
Sbjct: 134 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTES 192
Query: 523 KASTSTDVYAFGVFMLEV 540
K S ++DV++FGV + E+
Sbjct: 193 KFSVASDVWSFGVVLYEL 210
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 100/224 (44%), Gaps = 12/224 (5%)
Query: 343 ATKGFKDKDVIGRGGFGKVYRGVLASNVQIAVKKV---SHDSKQGIK-EFVAELVSMGRL 398
A + F+ +G+G FG VY + I KV + K G++ + E+ L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 399 RHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLY 458
RH N+++L GY L+ +Y P G + K L K + + I +A+ L Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK--FDEQRTATYITELANALSY 128
Query: 459 LHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPEL 518
H + V+HRDIKP N+LL + K+ DFG + H + T L GT Y+ PE+
Sbjct: 129 CHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEM 182
Query: 519 MRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWV 562
+ D+++ GV E G+ P E ET + V
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 226
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 106/208 (50%), Gaps = 8/208 (3%)
Query: 353 IGRGGFGKVYRGVLASNVQI-AVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCR 411
+G G +G VY+ + QI A+K+V +S ++E + E+ M + ++VK G
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYF 94
Query: 412 RKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRD 471
+ + +V +Y GS+ I+ K L + I++ GL YLH + +HRD
Sbjct: 95 KNTDLWIVMEYCGAGSVSDIIRLRNK-TLTEDEIATILQSTLKGLEYLHFMRK---IHRD 150
Query: 472 IKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDVY 531
IK N+LL+ + + KL DFG+A D + + ++GT +M PE+++ + D++
Sbjct: 151 IKAGNILLNTEGHAKLADFGVAGQLT-DXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIW 209
Query: 532 AFGVFMLEVASGRRPVEQQGSMETVNLV 559
+ G+ +E+A G+ P M + ++
Sbjct: 210 SLGITAIEMAEGKPPYADIHPMRAIFMI 237
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 101/198 (51%), Gaps = 15/198 (7%)
Query: 353 IGRGGFGKVYR---GVLASNVQ--IAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLR 407
+G+G FG V L N +AVKK+ H +++ +++F E+ + L+H N+VK +
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 408 GYCRRKGE--FLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQ 465
G C G L+ +Y+P GSL L + K ++ + + + G+ YL +
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYL---GTK 151
Query: 466 VVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG---TFGYMDPELMRTG 522
+HRD+ N+L++ + K+GDFGL ++ D K G F Y PE +
Sbjct: 152 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTES 210
Query: 523 KASTSTDVYAFGVFMLEV 540
K S ++DV++FGV + E+
Sbjct: 211 KFSVASDVWSFGVVLYEL 228
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 6/209 (2%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCRR 412
+G G FG+V+ G N ++A+K + + + F+ E M +L+H LV+L
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGT-MSPESFLEEAQIMKKLKHDKLVQLYAVVSE 75
Query: 413 KGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDI 472
+ ++ V +YM GSL L L + VA+G+ Y+ +HRD+
Sbjct: 76 EPIYI-VTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIER---MNYIHRDL 131
Query: 473 KPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDVYA 532
+ AN+L+ L K+ DFGLARL + + + PE G+ + +DV++
Sbjct: 132 RSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 191
Query: 533 FGVFMLE-VASGRRPVEQQGSMETVNLVD 560
FG+ + E V GR P + E + V+
Sbjct: 192 FGILLTELVTKGRVPYPGMNNREVLEQVE 220
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 127/277 (45%), Gaps = 36/277 (12%)
Query: 353 IGRGGFGKVYRGVLASNVQ-IAVKKVSHDSKQG-------IKEFVAELVSMGRLRHRNLV 404
IG+GGFG V++G L + +A+K + +G +EF E+ M L H N+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 405 KLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWE 464
KL G +V +++P G L L P + W + R++ +A G+ Y+ ++
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHP-IKWSVKLRLMLDIALGIEYM-QNQN 142
Query: 465 QVVLHRDIKPANVLL-----DADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELM 519
++HRD++ N+ L +A + K+ DFG ++ ++ + L+G F +M PE +
Sbjct: 143 PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ----QSVHSVSGLLGNFQWMAPETI 198
Query: 520 RTGKASTS--TDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASDS 577
+ S + D Y+F + + + +G P ++ S + ++ + + + I +
Sbjct: 199 GAEEESYTEKADTYSFAMILYTILTGEGPFDEY-SYGKIKFINMIREEGLRPTIPEDCPP 257
Query: 578 RLEGICEEKQMELVLKLGLFCSHPKPEARPNMRQVMQ 614
RL + E C P+ RP+ +++
Sbjct: 258 RLRNVIE------------LCWSGDPKKRPHFSYIVK 282
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 107/236 (45%), Gaps = 19/236 (8%)
Query: 331 GPQRFTYKDLYKATKGFKDKDVIGRGGFGKVYRGVLASNVQIAVKKV---SHDSKQGIK- 386
GP+++ +D F+ +G+G FG VY + I KV + K G++
Sbjct: 1 GPRQWALED-------FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH 53
Query: 387 EFVAELVSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRF 446
+ E+ LRH N+++L GY L+ +Y P G++ + L K + +
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTA 111
Query: 447 RIIRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTK 506
I +A+ L Y H + V+HRDIKP N+LL + K+ DFG + H + T+
Sbjct: 112 TYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTE 165
Query: 507 LVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWV 562
L GT Y+ PE++ D+++ GV E G+ P E ET + V
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 221
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 99/201 (49%), Gaps = 12/201 (5%)
Query: 352 VIGRGGFGKVYRGVLASNVQIAV-KKVSHDSKQGIKE--FVAELVSMGRLRHRNLVKL-- 406
IG G +G+ + S+ +I V K++ + S ++ V+E+ + L+H N+V+
Sbjct: 13 TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYD 72
Query: 407 RGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHE----- 461
R R +V +Y G L ++ K + F ++R + L L E
Sbjct: 73 RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEF-VLRVMTQLTLALKECHRRS 131
Query: 462 DWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRT 521
D VLHRD+KPANV LD N KLGDFGLAR+ +HD + VGT YM PE M
Sbjct: 132 DGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDE-DFAKEFVGTPYYMSPEQMNR 190
Query: 522 GKASTSTDVYAFGVFMLEVAS 542
+ +D+++ G + E+ +
Sbjct: 191 MSYNEKSDIWSLGCLLYELCA 211
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 101/198 (51%), Gaps = 15/198 (7%)
Query: 353 IGRGGFGKVYR---GVLASNVQ--IAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLR 407
+G+G FG V L N +AVKK+ H +++ +++F E+ + L+H N+VK +
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 408 GYCRRKGE--FLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQ 465
G C G L+ +Y+P GSL L + K ++ + + + G+ YL +
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYL---GTK 151
Query: 466 VVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG---TFGYMDPELMRTG 522
+HRD+ N+L++ + K+GDFGL ++ D K G F Y PE +
Sbjct: 152 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTES 210
Query: 523 KASTSTDVYAFGVFMLEV 540
K S ++DV++FGV + E+
Sbjct: 211 KFSVASDVWSFGVVLYEL 228
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 97/195 (49%), Gaps = 5/195 (2%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCRR 412
+G G FG+V+ G ++ ++AVK + + ++ F+ E M L+H LV+L R
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 413 KGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDI 472
+ ++ +YM GSL L ++ + + +A G+ Y+ + +HRD+
Sbjct: 80 EEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER---KNYIHRDL 136
Query: 473 KPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDVYA 532
+ ANVL+ L K+ DFGLAR+ + + + PE + G + +DV++
Sbjct: 137 RAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWS 196
Query: 533 FGVFMLEVAS-GRRP 546
FG+ + E+ + G+ P
Sbjct: 197 FGILLYEIVTYGKIP 211
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 127/277 (45%), Gaps = 36/277 (12%)
Query: 353 IGRGGFGKVYRGVLASNVQ-IAVKKVSHDSKQG-------IKEFVAELVSMGRLRHRNLV 404
IG+GGFG V++G L + +A+K + +G +EF E+ M L H N+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 405 KLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWE 464
KL G +V +++P G L L P + W + R++ +A G+ Y+ ++
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHP-IKWSVKLRLMLDIALGIEYM-QNQN 142
Query: 465 QVVLHRDIKPANVLL-----DADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELM 519
++HRD++ N+ L +A + K+ DF L++ ++ + L+G F +M PE +
Sbjct: 143 PPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ----QSVHSVSGLLGNFQWMAPETI 198
Query: 520 RTGKASTS--TDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASDS 577
+ S + D Y+F + + + +G P ++ S + ++ + + + I +
Sbjct: 199 GAEEESYTEKADTYSFAMILYTILTGEGPFDEY-SYGKIKFINMIREEGLRPTIPEDCPP 257
Query: 578 RLEGICEEKQMELVLKLGLFCSHPKPEARPNMRQVMQ 614
RL + E C P+ RP+ +++
Sbjct: 258 RLRNVIE------------LCWSGDPKKRPHFSYIVK 282
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 102/198 (51%), Gaps = 15/198 (7%)
Query: 353 IGRGGFGKVYR---GVLASNVQ--IAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLR 407
+G+G FG V L N +AVKK+ H +++ +++F E+ + L+H N+VK +
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 408 GYCRRKGE--FLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQ 465
G C G L+ +++P GSL + L + K ++ + + + G+ YL +
Sbjct: 81 GVCYSAGRRNLKLIMEFLPYGSLREYLQKH-KERIDHIKLLQYTSQICKGMEYL---GTK 136
Query: 466 VVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG---TFGYMDPELMRTG 522
+HRD+ N+L++ + K+GDFGL ++ D K G F Y PE +
Sbjct: 137 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTES 195
Query: 523 KASTSTDVYAFGVFMLEV 540
K S ++DV++FGV + E+
Sbjct: 196 KFSVASDVWSFGVVLYEL 213
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 110/222 (49%), Gaps = 12/222 (5%)
Query: 347 FKDKDVIGRGGFGKVYRGVLASNVQIAVKKVSH-DSKQGIK-EFVAELVSMGRLRHRNLV 404
F+ +G G G V++ + + +K+ H + K I+ + + EL + +V
Sbjct: 27 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 86
Query: 405 KLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWE 464
G GE + ++M GSLD++L + + I V GL YL E +
Sbjct: 87 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSI--AVIKGLTYLREKHK 144
Query: 465 QVVLHRDIKPANVLLDADLNGKLGDFGLA-RLYDHDTIPQTTKLVGTFGYMDPELMRTGK 523
++HRD+KP+N+L+++ KL DFG++ +L D VGT YM PE ++
Sbjct: 145 --IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMSPERLQGTH 198
Query: 524 ASTSTDVYAFGVFMLEVASGRRPV-EQQGSMETVNLVDWVCD 564
S +D+++ G+ ++E+A GR P+ GSM L+D++ +
Sbjct: 199 YSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVN 240
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 108/223 (48%), Gaps = 24/223 (10%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIK-EFVAELVSMG 396
++LY + + +V RG FG V++ L N +AVK KQ + E+ E+ S+
Sbjct: 17 ENLYFQSMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQSWQNEY--EVYSLP 73
Query: 397 RLRHRNLVKLRGYCRRKG----EFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGV 452
++H N+++ G +R + L+ + GSL L N+ ++W + I +
Sbjct: 74 GMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANV---VSWNELCHIAETM 130
Query: 453 ASGLLYLHED-------WEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDH-DTIPQT 504
A GL YLHED + + HRDIK NVLL +L + DFGLA ++ + T
Sbjct: 131 ARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDT 190
Query: 505 TKLVGTFGYMDPELMRTG-----KASTSTDVYAFGVFMLEVAS 542
VGT YM PE++ A D+YA G+ + E+AS
Sbjct: 191 HGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 101/198 (51%), Gaps = 15/198 (7%)
Query: 353 IGRGGFGKVYR---GVLASNVQ--IAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLR 407
+G+G FG V L N +AVKK+ H +++ +++F E+ + L+H N+VK +
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 408 GYCRRKGE--FLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQ 465
G C G L+ +Y+P GSL L + + ++ + + + G+ YL +
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAER-IDHIKLLQYTSQICKGMEYL---GTK 136
Query: 466 VVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG---TFGYMDPELMRTG 522
+HRD+ N+L++ + K+GDFGL ++ D K G F Y PE +
Sbjct: 137 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTES 195
Query: 523 KASTSTDVYAFGVFMLEV 540
K S ++DV++FGV + E+
Sbjct: 196 KFSVASDVWSFGVVLYEL 213
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 100/206 (48%), Gaps = 25/206 (12%)
Query: 353 IGRGGFGKVYRGVLASN-VQIAVKKVSHDSKQG-IKEFVAELVSMGRLRHRNLVKLRGYC 410
IG G +G V N V++A+KK+S Q + + E+ + R RH N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 411 R-----RKGEFLLVYDYMPNGSLDKILHT----NIKPCLNWYQRFRIIRGVASGLLYLHE 461
R + + +V D M L K+L T N C YQ R GL Y+H
Sbjct: 91 RAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILR-------GLKYIHS 142
Query: 462 DWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLY--DHDTIPQTTKLVGTFGYMDPELM 519
VLHRD+KP+N+LL+ + K+ DFGLAR+ DHD T+ V T Y PE+M
Sbjct: 143 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 520 RTGKAST-STDVYAFGVFMLEVASGR 544
K T S D+++ G + E+ S R
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 101/224 (45%), Gaps = 12/224 (5%)
Query: 343 ATKGFKDKDVIGRGGFGKVYRGVLASNVQIAVKKV---SHDSKQGIK-EFVAELVSMGRL 398
A + F+ +G+G FG VY + I KV + K G++ + E+ L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 399 RHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLY 458
RH N+++L GY L+ +Y P G++ + L K + + I +A+ L Y
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 149
Query: 459 LHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPEL 518
H + V+HRDIKP N+LL + K+ DFG + H + T L GT Y+ PE+
Sbjct: 150 CHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEM 203
Query: 519 MRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWV 562
+ D+++ GV E G+ P E ET + V
Sbjct: 204 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 247
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 100/206 (48%), Gaps = 25/206 (12%)
Query: 353 IGRGGFGKVYRGVLASN-VQIAVKKVSHDSKQG-IKEFVAELVSMGRLRHRNLVKLRGYC 410
IG G +G V N V++A+KK+S Q + + E+ + R RH N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 92
Query: 411 R-----RKGEFLLVYDYMPNGSLDKILHT----NIKPCLNWYQRFRIIRGVASGLLYLHE 461
R + + +V D M L K+L T N C YQ R GL Y+H
Sbjct: 93 RAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILR-------GLKYIHS 144
Query: 462 DWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLY--DHDTIPQTTKLVGTFGYMDPELM 519
VLHRD+KP+N+LL+ + K+ DFGLAR+ DHD T+ V T Y PE+M
Sbjct: 145 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 201
Query: 520 RTGKAST-STDVYAFGVFMLEVASGR 544
K T S D+++ G + E+ S R
Sbjct: 202 LNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 100/206 (48%), Gaps = 25/206 (12%)
Query: 353 IGRGGFGKVYRGVLASN-VQIAVKKVSHDSKQG-IKEFVAELVSMGRLRHRNLVKLRGYC 410
IG G +G V N V++A+KK+S Q + + E+ + R RH N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 411 R-----RKGEFLLVYDYMPNGSLDKILHT----NIKPCLNWYQRFRIIRGVASGLLYLHE 461
R + + +V D M L K+L T N C YQ R GL Y+H
Sbjct: 91 RAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILR-------GLKYIHS 142
Query: 462 DWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLY--DHDTIPQTTKLVGTFGYMDPELM 519
VLHRD+KP+N+LL+ + K+ DFGLAR+ DHD T+ V T Y PE+M
Sbjct: 143 ---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 520 RTGKAST-STDVYAFGVFMLEVASGR 544
K T S D+++ G + E+ S R
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 106/236 (44%), Gaps = 19/236 (8%)
Query: 331 GPQRFTYKDLYKATKGFKDKDVIGRGGFGKVYRGVLASNVQIAVKKV---SHDSKQGIK- 386
GP+++ +D F+ +G+G FG VY + I KV + K G++
Sbjct: 1 GPRQWALED-------FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEH 53
Query: 387 EFVAELVSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRF 446
+ E+ LRH N+++L GY L+ +Y P G++ + L K + +
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTA 111
Query: 447 RIIRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTK 506
I +A+ L Y H + V+HRDIKP N+LL + K+ DFG + H + T
Sbjct: 112 TYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTT 165
Query: 507 LVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWV 562
L GT Y+ PE++ D+++ GV E G+ P E ET + V
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 221
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 100/206 (48%), Gaps = 25/206 (12%)
Query: 353 IGRGGFGKVYRGVLASN-VQIAVKKVSHDSKQG-IKEFVAELVSMGRLRHRNLVKLRGYC 410
IG G +G V N V++A+KK+S Q + + E+ + R RH N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 411 R-----RKGEFLLVYDYMPNGSLDKILHT----NIKPCLNWYQRFRIIRGVASGLLYLHE 461
R + + +V D M L K+L T N C YQ R GL Y+H
Sbjct: 91 RAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILR-------GLKYIHS 142
Query: 462 DWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLY--DHDTIPQTTKLVGTFGYMDPELM 519
VLHRD+KP+N+LL+ + K+ DFGLAR+ DHD T+ V T Y PE+M
Sbjct: 143 ---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 520 RTGKAST-STDVYAFGVFMLEVASGR 544
K T S D+++ G + E+ S R
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 100/206 (48%), Gaps = 25/206 (12%)
Query: 353 IGRGGFGKVYRGVLASN-VQIAVKKVSHDSKQG-IKEFVAELVSMGRLRHRNLVKLRGYC 410
IG G +G V N V++A+KK+S Q + + E+ + R RH N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 411 R-----RKGEFLLVYDYMPNGSLDKILHT----NIKPCLNWYQRFRIIRGVASGLLYLHE 461
R + + +V D M L K+L T N C YQ R GL Y+H
Sbjct: 91 RAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILR-------GLKYIHS 142
Query: 462 DWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLY--DHDTIPQTTKLVGTFGYMDPELM 519
VLHRD+KP+N+LL+ + K+ DFGLAR+ DHD T+ V T Y PE+M
Sbjct: 143 ---ANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 520 RTGKAST-STDVYAFGVFMLEVASGR 544
K T S D+++ G + E+ S R
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 100/206 (48%), Gaps = 25/206 (12%)
Query: 353 IGRGGFGKVYRGVLASN-VQIAVKKVSHDSKQG-IKEFVAELVSMGRLRHRNLVKLRGYC 410
IG G +G V N V++A+KK+S Q + + E+ + R RH N++ +
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 98
Query: 411 R-----RKGEFLLVYDYMPNGSLDKILHT----NIKPCLNWYQRFRIIRGVASGLLYLHE 461
R + + +V D M L K+L T N C YQ R GL Y+H
Sbjct: 99 RAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILR-------GLKYIHS 150
Query: 462 DWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLY--DHDTIPQTTKLVGTFGYMDPELM 519
VLHRD+KP+N+LL+ + K+ DFGLAR+ DHD T+ V T Y PE+M
Sbjct: 151 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 207
Query: 520 RTGKAST-STDVYAFGVFMLEVASGR 544
K T S D+++ G + E+ S R
Sbjct: 208 LNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 100/206 (48%), Gaps = 25/206 (12%)
Query: 353 IGRGGFGKVYRGVLASN-VQIAVKKVSHDSKQG-IKEFVAELVSMGRLRHRNLVKLRGYC 410
IG G +G V N V++A+KK+S Q + + E+ + R RH N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 411 R-----RKGEFLLVYDYMPNGSLDKILHT----NIKPCLNWYQRFRIIRGVASGLLYLHE 461
R + + +V D M L K+L T N C YQ R GL Y+H
Sbjct: 91 RAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILR-------GLKYIHS 142
Query: 462 DWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLY--DHDTIPQTTKLVGTFGYMDPELM 519
VLHRD+KP+N+LL+ + K+ DFGLAR+ DHD T+ V T Y PE+M
Sbjct: 143 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 520 RTGKAST-STDVYAFGVFMLEVASGR 544
K T S D+++ G + E+ S R
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 100/206 (48%), Gaps = 25/206 (12%)
Query: 353 IGRGGFGKVYRGVLASN-VQIAVKKVSHDSKQG-IKEFVAELVSMGRLRHRNLVKLRGYC 410
IG G +G V N V++A+KK+S Q + + E+ + R RH N++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 411 R-----RKGEFLLVYDYMPNGSLDKILHT----NIKPCLNWYQRFRIIRGVASGLLYLHE 461
R + + +V D M L K+L T N C YQ R GL Y+H
Sbjct: 111 RAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILR-------GLKYIHS 162
Query: 462 DWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLY--DHDTIPQTTKLVGTFGYMDPELM 519
VLHRD+KP+N+LL+ + K+ DFGLAR+ DHD T+ V T Y PE+M
Sbjct: 163 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 219
Query: 520 RTGKAST-STDVYAFGVFMLEVASGR 544
K T S D+++ G + E+ S R
Sbjct: 220 LNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 101/224 (45%), Gaps = 12/224 (5%)
Query: 343 ATKGFKDKDVIGRGGFGKVYRGVLASNVQIAVKKV---SHDSKQGIK-EFVAELVSMGRL 398
A + F+ +G+G FG VY + I KV + K G++ + E+ L
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 399 RHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLY 458
RH N+++L GY L+ +Y P G++ + L K + + I +A+ L Y
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 140
Query: 459 LHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPEL 518
H + V+HRDIKP N+LL + K+ DFG + H + T L GT Y+ PE+
Sbjct: 141 CHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEM 194
Query: 519 MRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWV 562
+ D+++ GV E G+ P E ET + V
Sbjct: 195 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 238
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 100/206 (48%), Gaps = 25/206 (12%)
Query: 353 IGRGGFGKVYRGVLASN-VQIAVKKVSHDSKQG-IKEFVAELVSMGRLRHRNLVKLRGYC 410
IG G +G V N V++A+KK+S Q + + E+ + R RH N++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 411 R-----RKGEFLLVYDYMPNGSLDKILHT----NIKPCLNWYQRFRIIRGVASGLLYLHE 461
R + + +V D M L K+L T N C YQ R GL Y+H
Sbjct: 96 RAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILR-------GLKYIHS 147
Query: 462 DWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLY--DHDTIPQTTKLVGTFGYMDPELM 519
VLHRD+KP+N+LL+ + K+ DFGLAR+ DHD T+ V T Y PE+M
Sbjct: 148 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 204
Query: 520 RTGKAST-STDVYAFGVFMLEVASGR 544
K T S D+++ G + E+ S R
Sbjct: 205 LNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 100/206 (48%), Gaps = 25/206 (12%)
Query: 353 IGRGGFGKVYRGVLASN-VQIAVKKVSHDSKQG-IKEFVAELVSMGRLRHRNLVKLRGYC 410
IG G +G V N V++A+KK+S Q + + E+ + R RH N++ +
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 96
Query: 411 R-----RKGEFLLVYDYMPNGSLDKILHT----NIKPCLNWYQRFRIIRGVASGLLYLHE 461
R + + +V D M L K+L T N C YQ R GL Y+H
Sbjct: 97 RAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILR-------GLKYIHS 148
Query: 462 DWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLY--DHDTIPQTTKLVGTFGYMDPELM 519
VLHRD+KP+N+LL+ + K+ DFGLAR+ DHD T+ V T Y PE+M
Sbjct: 149 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 205
Query: 520 RTGKAST-STDVYAFGVFMLEVASGR 544
K T S D+++ G + E+ S R
Sbjct: 206 LNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 100/206 (48%), Gaps = 25/206 (12%)
Query: 353 IGRGGFGKVYRGVLASN-VQIAVKKVSHDSKQG-IKEFVAELVSMGRLRHRNLVKLRGYC 410
IG G +G V N V++A+KK+S Q + + E+ + R RH N++ +
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 87
Query: 411 R-----RKGEFLLVYDYMPNGSLDKILHT----NIKPCLNWYQRFRIIRGVASGLLYLHE 461
R + + +V D M L K+L T N C YQ R GL Y+H
Sbjct: 88 RAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILR-------GLKYIHS 139
Query: 462 DWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLY--DHDTIPQTTKLVGTFGYMDPELM 519
VLHRD+KP+N+LL+ + K+ DFGLAR+ DHD T+ V T Y PE+M
Sbjct: 140 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 196
Query: 520 RTGKAST-STDVYAFGVFMLEVASGR 544
K T S D+++ G + E+ S R
Sbjct: 197 LNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 100/206 (48%), Gaps = 25/206 (12%)
Query: 353 IGRGGFGKVYRGVLASN-VQIAVKKVSHDSKQG-IKEFVAELVSMGRLRHRNLVKLRGYC 410
IG G +G V N V++A+KK+S Q + + E+ + R RH N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 411 R-----RKGEFLLVYDYMPNGSLDKILHT----NIKPCLNWYQRFRIIRGVASGLLYLHE 461
R + + +V D M L K+L T N C YQ R GL Y+H
Sbjct: 95 RAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILR-------GLKYIHS 146
Query: 462 DWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLY--DHDTIPQTTKLVGTFGYMDPELM 519
VLHRD+KP+N+LL+ + K+ DFGLAR+ DHD T+ V T Y PE+M
Sbjct: 147 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 520 RTGKAST-STDVYAFGVFMLEVASGR 544
K T S D+++ G + E+ S R
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 100/206 (48%), Gaps = 25/206 (12%)
Query: 353 IGRGGFGKVYRGVLASN-VQIAVKKVSHDSKQG-IKEFVAELVSMGRLRHRNLVKLRGYC 410
IG G +G V N V++A+KK+S Q + + E+ + R RH N++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 411 R-----RKGEFLLVYDYMPNGSLDKILHT----NIKPCLNWYQRFRIIRGVASGLLYLHE 461
R + + +V D M L K+L T N C YQ R GL Y+H
Sbjct: 89 RAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILR-------GLKYIHS 140
Query: 462 DWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLY--DHDTIPQTTKLVGTFGYMDPELM 519
VLHRD+KP+N+LL+ + K+ DFGLAR+ DHD T+ V T Y PE+M
Sbjct: 141 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 197
Query: 520 RTGKAST-STDVYAFGVFMLEVASGR 544
K T S D+++ G + E+ S R
Sbjct: 198 LNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 105/224 (46%), Gaps = 20/224 (8%)
Query: 353 IGRGGFGKVYRGVLA------SNVQIAVKKVSH-DSKQGIKEFVAELVSMGRLRHRNLVK 405
+G G FG+VY G ++ S +Q+AVK + S+Q +F+ E + + +L H+N+V+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 406 LRGYCRRKGEFLLVYDYMPNGSLDKIL-HTNIKPC----LNWYQRFRIIRGVASGLLYLH 460
G + ++ + M G L L T +P L + R +A G YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 461 EDWEQVVLHRDIKPANVLLDADLNG---KLGDFGLAR-LYDHDTIPQTTKLVGTFGYMDP 516
E+ +HRDI N LL G K+GDFG+AR +Y + + +M P
Sbjct: 173 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 517 ELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLV 559
E G ++ TD ++FGV + E+ S G P + + E + V
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 273
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 100/206 (48%), Gaps = 25/206 (12%)
Query: 353 IGRGGFGKVYRGVLASN-VQIAVKKVSHDSKQG-IKEFVAELVSMGRLRHRNLVKLRGYC 410
IG G +G V N V++A+KK+S Q + + E+ + R RH N++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 411 R-----RKGEFLLVYDYMPNGSLDKILHT----NIKPCLNWYQRFRIIRGVASGLLYLHE 461
R + + +V D M L K+L T N C YQ R GL Y+H
Sbjct: 89 RAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILR-------GLKYIHS 140
Query: 462 DWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLY--DHDTIPQTTKLVGTFGYMDPELM 519
VLHRD+KP+N+LL+ + K+ DFGLAR+ DHD T+ V T Y PE+M
Sbjct: 141 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 197
Query: 520 RTGKAST-STDVYAFGVFMLEVASGR 544
K T S D+++ G + E+ S R
Sbjct: 198 LNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 101/224 (45%), Gaps = 12/224 (5%)
Query: 343 ATKGFKDKDVIGRGGFGKVYRGVLASNVQIAVKKV---SHDSKQGIK-EFVAELVSMGRL 398
A + F+ +G+G FG VY + I KV + K G++ + E+ L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 399 RHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLY 458
RH N+++L GY L+ +Y P G++ + L K + + I +A+ L Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 126
Query: 459 LHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPEL 518
H + V+HRDIKP N+LL + K+ DFG + H + T L GT Y+ PE+
Sbjct: 127 CHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEM 180
Query: 519 MRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWV 562
+ D+++ GV E G+ P E ET + V
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 224
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 140/306 (45%), Gaps = 44/306 (14%)
Query: 332 PQRFTYKDLYK------ATKGFKDKDVIGRGGFGKVYRGVLASNVQ------IAVKKVSH 379
P+ F+ D+Y A + +G+G FG VY GV V+ +A+K V+
Sbjct: 6 PEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNE 65
Query: 380 DSKQGIK-EFVAELVSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKP 438
+ + EF+ E M ++V+L G + L++ + M G L L + ++P
Sbjct: 66 AASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS-LRP 124
Query: 439 CL---------NWYQRFRIIRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGD 489
+ + + ++ +A G+ YL+ + +HRD+ N ++ D K+GD
Sbjct: 125 AMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGD 181
Query: 490 FGLAR-LYDHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPV 547
FG+ R +Y+ D + K + +M PE ++ G +T +DV++FGV + E+A+ +P
Sbjct: 182 FGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY 241
Query: 548 EQQGSMETVNLVDWVCDCWKKGAIRDASDSRLEGICEEKQMELVLKLGLFCSHPKPEARP 607
+ + + + V +G + D D+ C +++ +L C P+ RP
Sbjct: 242 QGLSNEQVLRFV-------MEGGLLDKPDN-----CP----DMLFELMRMCWQYNPKMRP 285
Query: 608 NMRQVM 613
+ +++
Sbjct: 286 SFLEII 291
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 100/206 (48%), Gaps = 25/206 (12%)
Query: 353 IGRGGFGKVYRGVLASN-VQIAVKKVSHDSKQG-IKEFVAELVSMGRLRHRNLVKLRGYC 410
IG G +G V N V++A+KK+S Q + + E+ + R RH N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 411 R-----RKGEFLLVYDYMPNGSLDKILHT----NIKPCLNWYQRFRIIRGVASGLLYLHE 461
R + + +V D M L K+L T N C YQ R GL Y+H
Sbjct: 95 RAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILR-------GLKYIHS 146
Query: 462 DWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLY--DHDTIPQTTKLVGTFGYMDPELM 519
VLHRD+KP+N+LL+ + K+ DFGLAR+ DHD T+ V T Y PE+M
Sbjct: 147 ---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 520 RTGKAST-STDVYAFGVFMLEVASGR 544
K T S D+++ G + E+ S R
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 98/210 (46%), Gaps = 23/210 (10%)
Query: 351 DVIGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYC 410
++ RG FG V++ L ++ +AVK KQ + E+ S ++H NL++
Sbjct: 21 EIKARGRFGCVWKAQLMNDF-VAVKIFPLQDKQSWQS-EREIFSTPGMKHENLLQFIAAE 78
Query: 411 RRKG----EFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHED--W- 463
+R E L+ + GSL L NI + W + + ++ GL YLHED W
Sbjct: 79 KRGSNLEVELWLITAFHDKGSLTDYLKGNI---ITWNELCHVAETMSRGLSYLHEDVPWC 135
Query: 464 -----EQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIP-QTTKLVGTFGYMDPE 517
+ + HRD K NVLL +DL L DFGLA ++ P T VGT YM PE
Sbjct: 136 RGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPE 195
Query: 518 LMRTG-----KASTSTDVYAFGVFMLEVAS 542
++ A D+YA G+ + E+ S
Sbjct: 196 VLEGAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 105/224 (46%), Gaps = 20/224 (8%)
Query: 353 IGRGGFGKVYRGVLA------SNVQIAVKKVSH-DSKQGIKEFVAELVSMGRLRHRNLVK 405
+G G FG+VY G ++ S +Q+AVK + S+Q +F+ E + + +L H+N+V+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 406 LRGYCRRKGEFLLVYDYMPNGSLDKIL-HTNIKPC----LNWYQRFRIIRGVASGLLYLH 460
G + ++ + M G L L T +P L + R +A G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 461 EDWEQVVLHRDIKPANVLLDADLNG---KLGDFGLAR-LYDHDTIPQTTKLVGTFGYMDP 516
E+ +HRDI N LL G K+GDFG+AR +Y + + +M P
Sbjct: 159 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 517 ELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLV 559
E G ++ TD ++FGV + E+ S G P + + E + V
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 259
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 101/198 (51%), Gaps = 15/198 (7%)
Query: 353 IGRGGFGKVYR---GVLASNVQ--IAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLR 407
+G+G FG V L N +AVKK+ H +++ +++F E+ + L+H N+VK +
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 408 GYCRRKGE--FLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQ 465
G C G L+ +Y+P GSL L + K ++ + + + G+ YL +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYL---GTK 133
Query: 466 VVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG---TFGYMDPELMRTG 522
+HRD+ N+L++ + K+GDFGL ++ D K G F Y PE +
Sbjct: 134 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYA-PESLTES 192
Query: 523 KASTSTDVYAFGVFMLEV 540
K S ++DV++FGV + E+
Sbjct: 193 KFSVASDVWSFGVVLYEL 210
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 101/224 (45%), Gaps = 12/224 (5%)
Query: 343 ATKGFKDKDVIGRGGFGKVYRGVLASNVQIAVKKV---SHDSKQGIK-EFVAELVSMGRL 398
A + F+ +G+G FG VY + I KV + K G++ + E+ L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 399 RHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLY 458
RH N+++L GY L+ +Y P G++ + L K + + I +A+ L Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 128
Query: 459 LHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPEL 518
H + V+HRDIKP N+LL + K+ DFG + H + T L GT Y+ PE+
Sbjct: 129 CHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEM 182
Query: 519 MRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWV 562
+ D+++ GV E G+ P E ET + V
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 226
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 101/224 (45%), Gaps = 12/224 (5%)
Query: 343 ATKGFKDKDVIGRGGFGKVYRGVLASNVQIAVKKV---SHDSKQGIK-EFVAELVSMGRL 398
A + F+ +G+G FG VY + I KV + K G++ + E+ L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 399 RHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLY 458
RH N+++L GY L+ +Y P G++ + L K + + I +A+ L Y
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 124
Query: 459 LHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPEL 518
H + V+HRDIKP N+LL + K+ DFG + H + T L GT Y+ PE+
Sbjct: 125 CHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPPEM 178
Query: 519 MRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWV 562
+ D+++ GV E G+ P E ET + V
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 222
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 101/224 (45%), Gaps = 12/224 (5%)
Query: 343 ATKGFKDKDVIGRGGFGKVYRGVLASNVQIAVKKV---SHDSKQGIK-EFVAELVSMGRL 398
A + F+ +G+G FG VY + I KV + K G++ + E+ L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 399 RHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLY 458
RH N+++L GY L+ +Y P G++ + L K + + I +A+ L Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 123
Query: 459 LHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPEL 518
H + V+HRDIKP N+LL + K+ DFG + H + T L GT Y+ PE+
Sbjct: 124 CHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPPEM 177
Query: 519 MRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWV 562
+ D+++ GV E G+ P E ET + V
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 221
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 101/224 (45%), Gaps = 12/224 (5%)
Query: 343 ATKGFKDKDVIGRGGFGKVYRGVLASNVQIAVKKV---SHDSKQGIK-EFVAELVSMGRL 398
A + F+ +G+G FG VY + I KV + K G++ + E+ L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 399 RHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLY 458
RH N+++L GY L+ +Y P G++ + L K + + I +A+ L Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 123
Query: 459 LHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPEL 518
H + V+HRDIKP N+LL + K+ DFG + H + T L GT Y+ PE+
Sbjct: 124 CHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPPEM 177
Query: 519 MRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWV 562
+ D+++ GV E G+ P E ET + V
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 221
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 100/206 (48%), Gaps = 25/206 (12%)
Query: 353 IGRGGFGKVYRGVLASN-VQIAVKKVSHDSKQG-IKEFVAELVSMGRLRHRNLVKLRGYC 410
IG G +G V N V++A+KK+S Q + + E+ + R RH N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDII 94
Query: 411 R-----RKGEFLLVYDYMPNGSLDKILHT----NIKPCLNWYQRFRIIRGVASGLLYLHE 461
R + + +V D M L K+L T N C YQ R GL Y+H
Sbjct: 95 RAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILR-------GLKYIHS 146
Query: 462 DWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLY--DHDTIPQTTKLVGTFGYMDPELM 519
VLHRD+KP+N+LL+ + K+ DFGLAR+ DHD T+ V T Y PE+M
Sbjct: 147 ---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 520 RTGKAST-STDVYAFGVFMLEVASGR 544
K T S D+++ G + E+ S R
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 101/224 (45%), Gaps = 12/224 (5%)
Query: 343 ATKGFKDKDVIGRGGFGKVYRGVLASNVQIAVKKV---SHDSKQGIK-EFVAELVSMGRL 398
A + F+ +G+G FG VY + I KV + K G++ + E+ L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 399 RHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLY 458
RH N+++L GY L+ +Y P G++ + L K + + I +A+ L Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 128
Query: 459 LHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPEL 518
H + V+HRDIKP N+LL + K+ DFG + H + T L GT Y+ PE+
Sbjct: 129 CHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPPEM 182
Query: 519 MRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWV 562
+ D+++ GV E G+ P E ET + V
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 226
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 111/238 (46%), Gaps = 34/238 (14%)
Query: 353 IGRGGFGKVYR----GVLASN--VQIAVKKVSHDSKQGIK-EFVAELVSMGRLRHRNLVK 405
IG G FG+V++ G+L +AVK + ++ ++ +F E M + N+VK
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 406 LRGYCRRKGEFLLVYDYMPNGSLDKIL------------HTNIK----------PCLNWY 443
L G C L+++YM G L++ L H+++ P L+
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 444 QRFRIIRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDHDTIP 502
++ I R VA+G+ YL E+ +HRD+ N L+ ++ K+ DFGL+R +Y D
Sbjct: 175 EQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 231
Query: 503 QTTKLVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLV 559
+M PE + + +T +DV+A+GV + E+ S G +P E + V
Sbjct: 232 ADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYV 289
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 101/224 (45%), Gaps = 12/224 (5%)
Query: 343 ATKGFKDKDVIGRGGFGKVYRGVLASNVQIAVKKV---SHDSKQGIK-EFVAELVSMGRL 398
A + F+ +G+G FG VY + I KV + K G++ + E+ L
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 399 RHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLY 458
RH N+++L GY L+ +Y P G++ + L K + + I +A+ L Y
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 122
Query: 459 LHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPEL 518
H + V+HRDIKP N+LL + K+ DFG + H + T L GT Y+ PE+
Sbjct: 123 CHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEM 176
Query: 519 MRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWV 562
+ D+++ GV E G+ P E ET + V
Sbjct: 177 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 220
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 108/222 (48%), Gaps = 35/222 (15%)
Query: 347 FKDKDVIGRGGFGKVYRGVLASNVQI-AVKKVSHDSKQGIKEFVAELVSMGRLRH----- 400
F++ V+G+G FG+V + A + + A+KK+ H +++ + ++E+ + L H
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH-TEEKLSTILSEVXLLASLNHQYVVR 66
Query: 401 --------RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHT-NIKPCLNWYQRFRIIRG 451
RN VK ++K + +Y N +L ++H+ N+ + Y +R+ R
Sbjct: 67 YYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEY--WRLFRQ 124
Query: 452 VASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR---------LYDHDTIP 502
+ L Y+H Q ++HR++KP N+ +D N K+GDFGLA+ D +P
Sbjct: 125 ILEALSYIHS---QGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLP 181
Query: 503 QT----TKLVGTFGYMDPELMR-TGKASTSTDVYAFGVFMLE 539
+ T +GT Y+ E++ TG + D Y+ G+ E
Sbjct: 182 GSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFE 223
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 101/224 (45%), Gaps = 12/224 (5%)
Query: 343 ATKGFKDKDVIGRGGFGKVYRGVLASNVQIAVKKV---SHDSKQGIK-EFVAELVSMGRL 398
A + F+ +G+G FG VY + I KV + K G++ + E+ L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 399 RHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLY 458
RH N+++L GY L+ +Y P G++ + L K + + I +A+ L Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 123
Query: 459 LHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPEL 518
H + V+HRDIKP N+LL + K+ DFG + H + T L GT Y+ PE+
Sbjct: 124 CHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTXLCGTLDYLPPEM 177
Query: 519 MRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWV 562
+ D+++ GV E G+ P E ET + V
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 221
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 101/224 (45%), Gaps = 12/224 (5%)
Query: 343 ATKGFKDKDVIGRGGFGKVYRGVLASNVQIAVKKV---SHDSKQGIK-EFVAELVSMGRL 398
A + F+ +G+G FG VY + I KV + K G++ + E+ L
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 399 RHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLY 458
RH N+++L GY L+ +Y P G++ + L K + + I +A+ L Y
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 127
Query: 459 LHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPEL 518
H + V+HRDIKP N+LL + K+ DFG + H + T L GT Y+ PE+
Sbjct: 128 CHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEM 181
Query: 519 MRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWV 562
+ D+++ GV E G+ P E ET + V
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 225
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 101/224 (45%), Gaps = 12/224 (5%)
Query: 343 ATKGFKDKDVIGRGGFGKVYRGVLASNVQIAVKKV---SHDSKQGIK-EFVAELVSMGRL 398
A + F+ +G+G FG VY + I KV + K G++ + E+ L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 399 RHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLY 458
RH N+++L GY L+ +Y P G++ + L K + + I +A+ L Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 126
Query: 459 LHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPEL 518
H + V+HRDIKP N+LL + K+ DFG + H + T L GT Y+ PE+
Sbjct: 127 CHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEM 180
Query: 519 MRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWV 562
+ D+++ GV E G+ P E ET + V
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 224
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 100/206 (48%), Gaps = 25/206 (12%)
Query: 353 IGRGGFGKVYRGVLASN-VQIAVKKVSHDSKQG-IKEFVAELVSMGRLRHRNLVKLRGYC 410
IG G +G V N V++A++K+S Q + + E+ + R RH N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 411 R-----RKGEFLLVYDYMPNGSLDKILHT----NIKPCLNWYQRFRIIRGVASGLLYLHE 461
R + + +V D M L K+L T N C YQ R GL Y+H
Sbjct: 95 RAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILR-------GLKYIHS 146
Query: 462 DWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLY--DHDTIPQTTKLVGTFGYMDPELM 519
VLHRD+KP+N+LL+ + K+ DFGLAR+ DHD T+ V T Y PE+M
Sbjct: 147 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 520 RTGKAST-STDVYAFGVFMLEVASGR 544
K T S D+++ G + E+ S R
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 100/224 (44%), Gaps = 12/224 (5%)
Query: 343 ATKGFKDKDVIGRGGFGKVYRGVLASNVQIAVKKV---SHDSKQGIK-EFVAELVSMGRL 398
A + F+ +G+G FG VY + I KV + K G++ + E+ L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 399 RHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLY 458
RH N+++L GY L+ +Y P G++ + L K + + I +A+ L Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 128
Query: 459 LHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPEL 518
H + V+HRDIKP N+LL + K+ DFG + H + T L GT Y+ PE
Sbjct: 129 CHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEX 182
Query: 519 MRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWV 562
+ D+++ GV E G+ P E ET + V
Sbjct: 183 IEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 226
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 101/224 (45%), Gaps = 12/224 (5%)
Query: 343 ATKGFKDKDVIGRGGFGKVYRGVLASNVQIAVKKV---SHDSKQGIK-EFVAELVSMGRL 398
A + F+ +G+G FG VY + I KV + K G++ + E+ L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 399 RHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLY 458
RH N+++L GY L+ +Y P G++ + L K + + I +A+ L Y
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 124
Query: 459 LHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPEL 518
H + V+HRDIKP N+LL + K+ DFG + H + T L GT Y+ PE+
Sbjct: 125 CHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---CHAPSSRRTTLSGTLDYLPPEM 178
Query: 519 MRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWV 562
+ D+++ GV E G+ P E ET + V
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 222
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 99/224 (44%), Gaps = 12/224 (5%)
Query: 343 ATKGFKDKDVIGRGGFGKVYRGVLASNVQIAVKKV---SHDSKQGIK-EFVAELVSMGRL 398
A + F+ +G+G FG VY + I KV + K G++ + E+ L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 399 RHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLY 458
RH N+++L GY L+ +Y P G + K L K + + I +A+ L Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK--FDEQRTATYITELANALSY 128
Query: 459 LHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPEL 518
H + V+HRDIKP N+LL + K+ DFG + H + L GT Y+ PE+
Sbjct: 129 CHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLXGTLDYLPPEM 182
Query: 519 MRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWV 562
+ D+++ GV E G+ P E ET + V
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 226
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 101/198 (51%), Gaps = 15/198 (7%)
Query: 353 IGRGGFGKVYR---GVLASNVQ--IAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLR 407
+G+G FG V L N +AVKK+ H +++ +++F E+ + L+H N+VK +
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 408 GYCRRKGE--FLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQ 465
G C G L+ +Y+P GSL L + K ++ + + + G+ YL +
Sbjct: 79 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYL---GTK 134
Query: 466 VVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG---TFGYMDPELMRTG 522
+HR++ N+L++ + K+GDFGL ++ D K G F Y PE +
Sbjct: 135 RYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYA-PESLTES 193
Query: 523 KASTSTDVYAFGVFMLEV 540
K S ++DV++FGV + E+
Sbjct: 194 KFSVASDVWSFGVVLYEL 211
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 131/279 (46%), Gaps = 38/279 (13%)
Query: 353 IGRGGFGKVYRGVLASNVQ------IAVKKVSHDSKQGIK-EFVAELVSMGRLRHRNLVK 405
+G+G FG VY GV V+ +A+K V+ + + EF+ E M ++V+
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 82
Query: 406 LRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCL---------NWYQRFRIIRGVASGL 456
L G + L++ + M G L L + ++P + + + ++ +A G+
Sbjct: 83 LLGVVSQGQPTLVIMELMTRGDLKSYLRS-LRPAMANNPVLAPPSLSKMIQMAGEIADGM 141
Query: 457 LYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDHDTIPQTTKLVGTFGYMD 515
YL+ + +HRD+ N ++ D K+GDFG+ R +Y+ D + K + +M
Sbjct: 142 AYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 198
Query: 516 PELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCDCWKKGAIRDA 574
PE ++ G +T +DV++FGV + E+A+ +P + + + + V +G + D
Sbjct: 199 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV-------MEGGLLDK 251
Query: 575 SDSRLEGICEEKQMELVLKLGLFCSHPKPEARPNMRQVM 613
D+ C +++ +L C P+ RP+ +++
Sbjct: 252 PDN-----CP----DMLFELMRMCWQYNPKMRPSFLEII 281
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 99/205 (48%), Gaps = 23/205 (11%)
Query: 353 IGRGGFGKVYRGVLASN-VQIAVKKVSHDSKQG-IKEFVAELVSMGRLRHRNLVKLRGYC 410
IG G +G V N V++A+KK+S Q + + E+ + R RH N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 411 R-----RKGEFLLVYDYMPNG--SLDKILH-TNIKPCLNWYQRFRIIRGVASGLLYLHED 462
R + + +V D M L K H +N C YQ R GL Y+H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILR-------GLKYIHS- 146
Query: 463 WEQVVLHRDIKPANVLLDADLNGKLGDFGLARLY--DHDTIPQTTKLVGTFGYMDPELMR 520
VLHRD+KP+N+LL+ + K+ DFGLAR+ DHD T+ V T Y PE+M
Sbjct: 147 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 521 TGKAST-STDVYAFGVFMLEVASGR 544
K T S D+++ G + E+ S R
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 100/224 (44%), Gaps = 12/224 (5%)
Query: 343 ATKGFKDKDVIGRGGFGKVYRGVLASNVQIAVKKV---SHDSKQGIK-EFVAELVSMGRL 398
A + F+ +G+G FG VY I KV + K G++ + E+ L
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 399 RHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLY 458
RH N+++L GY L+ +Y P G++ + L K + + I +A+ L Y
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 120
Query: 459 LHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPEL 518
H + V+HRDIKP N+LL + K+ DFG + H + T L GT Y+ PE+
Sbjct: 121 CHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEM 174
Query: 519 MRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWV 562
+ D+++ GV E G+ P E ET + V
Sbjct: 175 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 218
>pdb|3UJO|A Chain A, Galactose-Specific Seed Lectin From Dolichos Lablab In
Complex With Adenine And Galactose
pdb|3UJO|B Chain B, Galactose-Specific Seed Lectin From Dolichos Lablab In
Complex With Adenine And Galactose
pdb|3UJO|C Chain C, Galactose-Specific Seed Lectin From Dolichos Lablab In
Complex With Adenine And Galactose
pdb|3UJO|D Chain D, Galactose-Specific Seed Lectin From Dolichos Lablab In
Complex With Adenine And Galactose
pdb|3UJQ|A Chain A, Galactose-Specific Lectin From Dolichos Lablab In Complex
With Galactose
pdb|3UJQ|B Chain B, Galactose-Specific Lectin From Dolichos Lablab In Complex
With Galactose
pdb|3UJQ|C Chain C, Galactose-Specific Lectin From Dolichos Lablab In Complex
With Galactose
pdb|3UJQ|D Chain D, Galactose-Specific Lectin From Dolichos Lablab In Complex
With Galactose
pdb|3UK9|A Chain A, Galactose-Specific Lectin From Dolichos Lablab
pdb|3UK9|B Chain B, Galactose-Specific Lectin From Dolichos Lablab
pdb|3UK9|C Chain C, Galactose-Specific Lectin From Dolichos Lablab
pdb|3UK9|D Chain D, Galactose-Specific Lectin From Dolichos Lablab
pdb|3UK9|E Chain E, Galactose-Specific Lectin From Dolichos Lablab
pdb|3UK9|F Chain F, Galactose-Specific Lectin From Dolichos Lablab
pdb|3UK9|G Chain G, Galactose-Specific Lectin From Dolichos Lablab
pdb|3UK9|H Chain H, Galactose-Specific Lectin From Dolichos Lablab
pdb|3UL2|A Chain A, Galactose-Specific Lectin From Dolichos Lablab In P6522
Space Group
pdb|3UL2|B Chain B, Galactose-Specific Lectin From Dolichos Lablab In P6522
Space Group
pdb|3UL2|C Chain C, Galactose-Specific Lectin From Dolichos Lablab In P6522
Space Group
pdb|3UL2|D Chain D, Galactose-Specific Lectin From Dolichos Lablab In P6522
Space Group
Length = 281
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 126/271 (46%), Gaps = 48/271 (17%)
Query: 6 RSFCFCVLLCASFIFSALAQDVNQFIYHGFNE-DAQLQRDGLASVHSNGLLQLTNTV--- 61
R F +LL A + ++ F + FNE + LQRD S +G L++T
Sbjct: 10 RIVLFLILLT-----KAASANLISFTFKKFNETNLILQRDATVS---SGKLRITKAAENG 61
Query: 62 --SPQQEGHAFYRLPIK-FNTXXXXXXXXXXNFVF----------AIGMAFVISPSKDLG 108
+ G AFY PI+ ++ +F F A G+AF + P +G
Sbjct: 62 VPTAGSLGRAFYSTPIQIWDNTTGTVASWATSFTFNLQAPNAASPADGLAFALVP---VG 118
Query: 109 KAEASPSEYLGLFNASNNGQSTNHILAIELDTVQNLDFDDIDDNHVGIDVNSLISHESAP 168
+LGLF+ S N S+N +A+E DT N +D + H+GIDVNS+ S ++
Sbjct: 119 SQPKDKGGFLGLFD-SKNYASSNQTVAVEFDTFYNGGWDPTE-RHIGIDVNSIKSIKTT- 175
Query: 169 AAYFSDREGMNKTLELIIGDPIQIWISYDGAEKLLNVTLAPMSIPKPTKPLLSRAINLSH 228
+ + G+ ++ I+YD + LL +L S + T ++S ++L+
Sbjct: 176 ------------SWDFANGENAEVLITYDSSTNLLVASLVHPS--QKTSFIVSERVDLTS 221
Query: 229 ILLETMYVGFSASTGSLK---SSHYVLGWSF 256
+L E + VGFSA+TG K ++ VL WSF
Sbjct: 222 VLPEWVSVGFSATTGLSKGYVETNEVLSWSF 252
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 104/224 (46%), Gaps = 20/224 (8%)
Query: 353 IGRGGFGKVYRGVLA------SNVQIAVKKVSH-DSKQGIKEFVAELVSMGRLRHRNLVK 405
+G G FG+VY G ++ S +Q+AVK + S+Q +F+ E + + + H+N+V+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 406 LRGYCRRKGEFLLVYDYMPNGSLDKIL-HTNIKPC----LNWYQRFRIIRGVASGLLYLH 460
G + ++ + M G L L T +P L + R +A G YL
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 461 EDWEQVVLHRDIKPANVLLDADLNG---KLGDFGLAR-LYDHDTIPQTTKLVGTFGYMDP 516
E+ +HRDI N LL G K+GDFG+AR +Y + + +M P
Sbjct: 158 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 517 ELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLV 559
E G ++ TD ++FGV + E+ S G P + + E + V
Sbjct: 215 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 258
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 104/224 (46%), Gaps = 20/224 (8%)
Query: 353 IGRGGFGKVYRGVLA------SNVQIAVKKVSH-DSKQGIKEFVAELVSMGRLRHRNLVK 405
+G G FG+VY G ++ S +Q+AVK + S+Q +F+ E + + + H+N+V+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 406 LRGYCRRKGEFLLVYDYMPNGSLDKIL-HTNIKPC----LNWYQRFRIIRGVASGLLYLH 460
G + ++ + M G L L T +P L + R +A G YL
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 461 EDWEQVVLHRDIKPANVLLDADLNG---KLGDFGLAR-LYDHDTIPQTTKLVGTFGYMDP 516
E+ +HRDI N LL G K+GDFG+AR +Y + + +M P
Sbjct: 173 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 517 ELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLV 559
E G ++ TD ++FGV + E+ S G P + + E + V
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 273
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 104/224 (46%), Gaps = 20/224 (8%)
Query: 353 IGRGGFGKVYRGVLA------SNVQIAVKKVSH-DSKQGIKEFVAELVSMGRLRHRNLVK 405
+G G FG+VY G ++ S +Q+AVK + S+Q +F+ E + + + H+N+V+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 406 LRGYCRRKGEFLLVYDYMPNGSLDKIL-HTNIKPC----LNWYQRFRIIRGVASGLLYLH 460
G + ++ + M G L L T +P L + R +A G YL
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 461 EDWEQVVLHRDIKPANVLLDADLNG---KLGDFGLAR-LYDHDTIPQTTKLVGTFGYMDP 516
E+ +HRDI N LL G K+GDFG+AR +Y + + +M P
Sbjct: 158 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 517 ELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLV 559
E G ++ TD ++FGV + E+ S G P + + E + V
Sbjct: 215 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 258
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 100/205 (48%), Gaps = 23/205 (11%)
Query: 353 IGRGGFGKVYRGVLASN-VQIAVKKVSHDSKQG-IKEFVAELVSMGRLRHRNLVKLRGYC 410
IG G +G V N V++A+KK+S Q + + E+ + R RH N++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 411 R----RKGEFLLVYDYMPNGSLDKILHT----NIKPCLNWYQRFRIIRGVASGLLYLHED 462
R + + + + ++ L K+L T N C YQ R GL Y+H
Sbjct: 111 RAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILR-------GLKYIHS- 162
Query: 463 WEQVVLHRDIKPANVLLDADLNGKLGDFGLARLY--DHDTIPQTTKLVGTFGYMDPELMR 520
VLHRD+KP+N+LL+ + K+ DFGLAR+ DHD T+ V T Y PE+M
Sbjct: 163 --ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 220
Query: 521 TGKAST-STDVYAFGVFMLEVASGR 544
K T S D+++ G + E+ S R
Sbjct: 221 NSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 140/306 (45%), Gaps = 44/306 (14%)
Query: 332 PQRFTYKDLYK------ATKGFKDKDVIGRGGFGKVYRGVLASNVQ------IAVKKVSH 379
P+ F+ D+Y A + +G+G FG VY GV V+ +A+K V+
Sbjct: 6 PEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNE 65
Query: 380 DSKQGIK-EFVAELVSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKP 438
+ + EF+ E M ++V+L G + L++ + M G L L + ++P
Sbjct: 66 AASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS-LRP 124
Query: 439 CL---------NWYQRFRIIRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGD 489
+ + + ++ +A G+ YL+ + +HRD+ N ++ D K+GD
Sbjct: 125 EMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGD 181
Query: 490 FGLAR-LYDHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPV 547
FG+ R +Y+ D + K + +M PE ++ G +T +DV++FGV + E+A+ +P
Sbjct: 182 FGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY 241
Query: 548 EQQGSMETVNLVDWVCDCWKKGAIRDASDSRLEGICEEKQMELVLKLGLFCSHPKPEARP 607
+ + + + V +G + D D+ C +++ +L C P+ RP
Sbjct: 242 QGLSNEQVLRFV-------MEGGLLDKPDN-----CP----DMLFELMRMCWQYNPKMRP 285
Query: 608 NMRQVM 613
+ +++
Sbjct: 286 SFLEII 291
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 104/224 (46%), Gaps = 20/224 (8%)
Query: 353 IGRGGFGKVYRGVLA------SNVQIAVKKVSHD-SKQGIKEFVAELVSMGRLRHRNLVK 405
+G G FG+VY G ++ S +Q+AVK + S+Q +F+ E + + + H+N+V+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 406 LRGYCRRKGEFLLVYDYMPNGSLDKIL-HTNIKPC----LNWYQRFRIIRGVASGLLYLH 460
G + ++ + M G L L T +P L + R +A G YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 461 EDWEQVVLHRDIKPANVLLDADLNG---KLGDFGLAR-LYDHDTIPQTTKLVGTFGYMDP 516
E+ +HRDI N LL G K+GDFG+AR +Y + + +M P
Sbjct: 173 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 517 ELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLV 559
E G ++ TD ++FGV + E+ S G P + + E + V
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 273
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 106/199 (53%), Gaps = 17/199 (8%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDSK-QGIKEF-VAELVSMGRLRHRNLVKLRGYC 410
+G G +G VY+ + +A+K++ D++ +GI + E+ + L H N+V L
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 411 RRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQ----RFRIIRGVASGLLYLHEDWEQV 466
+ LV+++M L K+L N K L Q ++++RGVA + H+
Sbjct: 89 HSERCLTLVFEFM-EKDLKKVLDEN-KTGLQDSQIKIYLYQLLRGVA----HCHQ---HR 139
Query: 467 VLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPE-LMRTGKAS 525
+LHRD+KP N+L+++D KL DFGLAR + T ++V T Y P+ LM + K S
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVLMGSKKYS 198
Query: 526 TSTDVYAFGVFMLEVASGR 544
TS D+++ G E+ +G+
Sbjct: 199 TSVDIWSIGCIFAEMITGK 217
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 104/224 (46%), Gaps = 20/224 (8%)
Query: 353 IGRGGFGKVYRGVLA------SNVQIAVKKVSH-DSKQGIKEFVAELVSMGRLRHRNLVK 405
+G G FG+VY G ++ S +Q+AVK + S+Q +F+ E + + + H+N+V+
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 406 LRGYCRRKGEFLLVYDYMPNGSLDKIL-HTNIKPC----LNWYQRFRIIRGVASGLLYLH 460
G + ++ + M G L L T +P L + R +A G YL
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 461 EDWEQVVLHRDIKPANVLLDADLNG---KLGDFGLAR-LYDHDTIPQTTKLVGTFGYMDP 516
E+ +HRDI N LL G K+GDFG+AR +Y + + +M P
Sbjct: 165 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 221
Query: 517 ELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLV 559
E G ++ TD ++FGV + E+ S G P + + E + V
Sbjct: 222 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 265
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 104/224 (46%), Gaps = 20/224 (8%)
Query: 353 IGRGGFGKVYRGVLA------SNVQIAVKKVSH-DSKQGIKEFVAELVSMGRLRHRNLVK 405
+G G FG+VY G ++ S +Q+AVK + S+Q +F+ E + + + H+N+V+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 406 LRGYCRRKGEFLLVYDYMPNGSLDKIL-HTNIKPC----LNWYQRFRIIRGVASGLLYLH 460
G + ++ + M G L L T +P L + R +A G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 461 EDWEQVVLHRDIKPANVLLDADLNG---KLGDFGLAR-LYDHDTIPQTTKLVGTFGYMDP 516
E+ +HRDI N LL G K+GDFG+AR +Y + + +M P
Sbjct: 159 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 517 ELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLV 559
E G ++ TD ++FGV + E+ S G P + + E + V
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 259
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 140/306 (45%), Gaps = 44/306 (14%)
Query: 332 PQRFTYKDLYK------ATKGFKDKDVIGRGGFGKVYRGVLASNVQ------IAVKKVSH 379
P+ F+ D+Y A + +G+G FG VY GV V+ +A+K V+
Sbjct: 28 PEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNE 87
Query: 380 DSKQGIK-EFVAELVSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKP 438
+ + EF+ E M ++V+L G + L++ + M G L L + ++P
Sbjct: 88 AASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS-LRP 146
Query: 439 CL---------NWYQRFRIIRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGD 489
+ + + ++ +A G+ YL+ + +HRD+ N ++ D K+GD
Sbjct: 147 EMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGD 203
Query: 490 FGLAR-LYDHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPV 547
FG+ R +Y+ D + K + +M PE ++ G +T +DV++FGV + E+A+ +P
Sbjct: 204 FGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY 263
Query: 548 EQQGSMETVNLVDWVCDCWKKGAIRDASDSRLEGICEEKQMELVLKLGLFCSHPKPEARP 607
+ + + + V +G + D D+ C +++ +L C P+ RP
Sbjct: 264 QGLSNEQVLRFV-------MEGGLLDKPDN-----CP----DMLFELMRMCWQYNPKMRP 307
Query: 608 NMRQVM 613
+ +++
Sbjct: 308 SFLEII 313
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 104/224 (46%), Gaps = 20/224 (8%)
Query: 353 IGRGGFGKVYRGVLA------SNVQIAVKKVSH-DSKQGIKEFVAELVSMGRLRHRNLVK 405
+G G FG+VY G ++ S +Q+AVK + S+Q +F+ E + + + H+N+V+
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 406 LRGYCRRKGEFLLVYDYMPNGSLDKIL-HTNIKPC----LNWYQRFRIIRGVASGLLYLH 460
G + ++ + M G L L T +P L + R +A G YL
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 461 EDWEQVVLHRDIKPANVLLDADLNG---KLGDFGLAR-LYDHDTIPQTTKLVGTFGYMDP 516
E+ +HRDI N LL G K+GDFG+AR +Y + + +M P
Sbjct: 175 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 231
Query: 517 ELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLV 559
E G ++ TD ++FGV + E+ S G P + + E + V
Sbjct: 232 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 275
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 104/224 (46%), Gaps = 20/224 (8%)
Query: 353 IGRGGFGKVYRGVLA------SNVQIAVKKVSH-DSKQGIKEFVAELVSMGRLRHRNLVK 405
+G G FG+VY G ++ S +Q+AVK + S+Q +F+ E + + + H+N+V+
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 406 LRGYCRRKGEFLLVYDYMPNGSLDKIL-HTNIKPC----LNWYQRFRIIRGVASGLLYLH 460
G + ++ + M G L L T +P L + R +A G YL
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 461 EDWEQVVLHRDIKPANVLLDADLNG---KLGDFGLAR-LYDHDTIPQTTKLVGTFGYMDP 516
E+ +HRDI N LL G K+GDFG+AR +Y + + +M P
Sbjct: 150 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 206
Query: 517 ELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLV 559
E G ++ TD ++FGV + E+ S G P + + E + V
Sbjct: 207 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 250
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 104/224 (46%), Gaps = 20/224 (8%)
Query: 353 IGRGGFGKVYRGVLA------SNVQIAVKKVSH-DSKQGIKEFVAELVSMGRLRHRNLVK 405
+G G FG+VY G ++ S +Q+AVK + S+Q +F+ E + + + H+N+V+
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 406 LRGYCRRKGEFLLVYDYMPNGSLDKIL-HTNIKPC----LNWYQRFRIIRGVASGLLYLH 460
G + ++ + M G L L T +P L + R +A G YL
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 184
Query: 461 EDWEQVVLHRDIKPANVLLDADLNG---KLGDFGLAR-LYDHDTIPQTTKLVGTFGYMDP 516
E+ +HRDI N LL G K+GDFG+AR +Y + + +M P
Sbjct: 185 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 241
Query: 517 ELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLV 559
E G ++ TD ++FGV + E+ S G P + + E + V
Sbjct: 242 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 285
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 106/199 (53%), Gaps = 17/199 (8%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDSK-QGIKEF-VAELVSMGRLRHRNLVKLRGYC 410
+G G +G VY+ + +A+K++ D++ +GI + E+ + L H N+V L
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 411 RRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQ----RFRIIRGVASGLLYLHEDWEQV 466
+ LV+++M L K+L N K L Q ++++RGVA + H+
Sbjct: 89 HSERCLTLVFEFM-EKDLKKVLDEN-KTGLQDSQIKIYLYQLLRGVA----HCHQ---HR 139
Query: 467 VLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPE-LMRTGKAS 525
+LHRD+KP N+L+++D KL DFGLAR + T ++V T Y P+ LM + K S
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVLMGSKKYS 198
Query: 526 TSTDVYAFGVFMLEVASGR 544
TS D+++ G E+ +G+
Sbjct: 199 TSVDIWSIGCIFAEMITGK 217
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 102/212 (48%), Gaps = 14/212 (6%)
Query: 353 IGRGGFGKVYRGVLASNV----QIAVKKV--SHDSKQGIKEFVAELVSMGRLRHRNLVKL 406
IG G FGK +L + Q +K++ S S + +E E+ + ++H N+V+
Sbjct: 32 IGEGSFGK---AILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQY 88
Query: 407 RGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQV 466
R G +V DY G L K ++ K L +Q +I+ L L ++
Sbjct: 89 RESFEENGSLYIVMDYCEGGDLFKRINAQ-KGVL--FQEDQILDWFVQICLALKHVHDRK 145
Query: 467 VLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKAST 526
+LHRDIK N+ L D +LGDFG+AR+ + T+ +GT Y+ PE+ +
Sbjct: 146 ILHRDIKSQNIFLTKDGTVQLGDFGIARVLN-STVELARACIGTPYYLSPEICENKPYNN 204
Query: 527 STDVYAFGVFMLEVASGRRPVEQQGSMETVNL 558
+D++A G + E+ + + E GSM+ + L
Sbjct: 205 KSDIWALGCVLYELCTLKHAFE-AGSMKNLVL 235
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 101/224 (45%), Gaps = 12/224 (5%)
Query: 343 ATKGFKDKDVIGRGGFGKVYRGVLASNVQIAVKKV---SHDSKQGIK-EFVAELVSMGRL 398
A + F+ +G+G FG VY + I KV + K G++ + E+ L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 399 RHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLY 458
RH N+++L GY L+ +Y P G++ + L K + + I +A+ L Y
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 125
Query: 459 LHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPEL 518
H + V+HRDIKP N+LL + K+ +FG + H + T L GT Y+ PE+
Sbjct: 126 CHS---KRVIHRDIKPENLLLGSAGELKIANFGWS---VHAPSSRRTTLCGTLDYLPPEM 179
Query: 519 MRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWV 562
+ D+++ GV E G+ P E ET + V
Sbjct: 180 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 223
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 100/224 (44%), Gaps = 12/224 (5%)
Query: 343 ATKGFKDKDVIGRGGFGKVYRGVLASNVQIAVKKV---SHDSKQGIK-EFVAELVSMGRL 398
A + F+ +G+G FG VY + I KV + K G++ + E+ L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 399 RHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLY 458
RH N+++L GY L+ +Y P G++ + L K + + I +A+ L Y
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 149
Query: 459 LHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPEL 518
H + V+HRDIKP N+LL + K+ DFG + H + L GT Y+ PE+
Sbjct: 150 CHS---KRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRDDLCGTLDYLPPEM 203
Query: 519 MRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWV 562
+ D+++ GV E G+ P E ET + V
Sbjct: 204 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 247
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 104/224 (46%), Gaps = 20/224 (8%)
Query: 353 IGRGGFGKVYRGVLA------SNVQIAVKKVSH-DSKQGIKEFVAELVSMGRLRHRNLVK 405
+G G FG+VY G ++ S +Q+AVK + S+Q +F+ E + + + H+N+V+
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 406 LRGYCRRKGEFLLVYDYMPNGSLDKIL-HTNIKPC----LNWYQRFRIIRGVASGLLYLH 460
G + ++ + M G L L T +P L + R +A G YL
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 461 EDWEQVVLHRDIKPANVLLDADLNG---KLGDFGLAR-LYDHDTIPQTTKLVGTFGYMDP 516
E+ +HRDI N LL G K+GDFG+AR +Y + + +M P
Sbjct: 199 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 255
Query: 517 ELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLV 559
E G ++ TD ++FGV + E+ S G P + + E + V
Sbjct: 256 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 299
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 100/224 (44%), Gaps = 12/224 (5%)
Query: 343 ATKGFKDKDVIGRGGFGKVYRGVLASNVQIAVKKV---SHDSKQGIK-EFVAELVSMGRL 398
A + F+ +G+G FG VY + I KV + K G++ + E+ L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 399 RHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLY 458
RH N+++L GY L+ +Y P G++ + L K + + I +A+ L Y
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 125
Query: 459 LHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPEL 518
H + V+HRDIKP N+LL + K+ DFG + H + L GT Y+ PE+
Sbjct: 126 CHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLCGTLDYLPPEM 179
Query: 519 MRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWV 562
+ D+++ GV E G+ P E ET + V
Sbjct: 180 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 223
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 99/206 (48%), Gaps = 25/206 (12%)
Query: 353 IGRGGFGKVYRGVLASN-VQIAVKKVSHDSKQG-IKEFVAELVSMGRLRHRNLVKLRGYC 410
IG G +G V N V++A+KK+S Q + + E+ + R RH N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 411 R-----RKGEFLLVYDYMPNGSLDKILHT----NIKPCLNWYQRFRIIRGVASGLLYLHE 461
R + + +V D M L K+L T N C YQ R GL Y+H
Sbjct: 95 RAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILR-------GLKYIHS 146
Query: 462 DWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLY--DHDTIPQTTKLVGTFGYMDPELM 519
VLHRD+KP+N+LL+ + K+ DFGLAR+ DHD + V T Y PE+M
Sbjct: 147 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIM 203
Query: 520 RTGKAST-STDVYAFGVFMLEVASGR 544
K T S D+++ G + E+ S R
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 99/206 (48%), Gaps = 25/206 (12%)
Query: 353 IGRGGFGKVYRGVLASN-VQIAVKKVSHDSKQG-IKEFVAELVSMGRLRHRNLVKLRGYC 410
IG G +G V N V++A+KK+S Q + + E+ + R RH N++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 411 R-----RKGEFLLVYDYMPNGSLDKILHT----NIKPCLNWYQRFRIIRGVASGLLYLHE 461
R + + +V D M L K+L T N C YQ R GL Y+H
Sbjct: 96 RAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILR-------GLKYIHS 147
Query: 462 DWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLY--DHDTIPQTTKLVGTFGYMDPELM 519
VLHRD+KP+N+LL+ + K+ DFGLAR+ DHD + V T Y PE+M
Sbjct: 148 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIM 204
Query: 520 RTGKAST-STDVYAFGVFMLEVASGR 544
K T S D+++ G + E+ S R
Sbjct: 205 LNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 104/224 (46%), Gaps = 20/224 (8%)
Query: 353 IGRGGFGKVYRGVLA------SNVQIAVKKVSH-DSKQGIKEFVAELVSMGRLRHRNLVK 405
+G G FG+VY G ++ S +Q+AVK + S+Q +F+ E + + + H+N+V+
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 406 LRGYCRRKGEFLLVYDYMPNGSLDKIL-HTNIKPC----LNWYQRFRIIRGVASGLLYLH 460
G + ++ + M G L L T +P L + R +A G YL
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 461 EDWEQVVLHRDIKPANVLLDADLNG---KLGDFGLAR-LYDHDTIPQTTKLVGTFGYMDP 516
E+ +HRDI N LL G K+GDFG+AR +Y + + +M P
Sbjct: 176 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 232
Query: 517 ELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLV 559
E G ++ TD ++FGV + E+ S G P + + E + V
Sbjct: 233 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 276
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 99/206 (48%), Gaps = 25/206 (12%)
Query: 353 IGRGGFGKVYRGVLASN-VQIAVKKVSHDSKQG-IKEFVAELVSMGRLRHRNLVKLRGYC 410
IG G +G V N V++A+KK+S Q + + E+ + RH N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 411 R-----RKGEFLLVYDYMPNGSLDKILHT----NIKPCLNWYQRFRIIRGVASGLLYLHE 461
R + + +V D M L K+L T N C YQ R GL Y+H
Sbjct: 93 RAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILR-------GLKYIHS 144
Query: 462 DWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLY--DHDTIPQTTKLVGTFGYMDPELM 519
VLHRD+KP+N+LL+ + K+ DFGLAR+ DHD T+ V T Y PE+M
Sbjct: 145 ---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 201
Query: 520 RTGKAST-STDVYAFGVFMLEVASGR 544
K T S D+++ G + E+ S R
Sbjct: 202 LNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 100/202 (49%), Gaps = 13/202 (6%)
Query: 352 VIGRGGFGKVYRGVLASN----VQIAVKKVSHDSKQGIKE-FVAELVSMGRLRHRNLVKL 406
++G G FG+VY GV ++ + +AVK D KE F++E V M L H ++VKL
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 74
Query: 407 RGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQV 466
G + ++++ Y P G L L N K L + + YL E +
Sbjct: 75 IGIIEEEPTWIIMELY-PYGELGHYLERN-KNSLKVLTLVLYSLQICKAMAYL----ESI 128
Query: 467 -VLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKAS 525
+HRDI N+L+ + KLGDFGL+R + + + + +M PE + + +
Sbjct: 129 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFT 188
Query: 526 TSTDVYAFGVFMLEVAS-GRRP 546
T++DV+ F V M E+ S G++P
Sbjct: 189 TASDVWMFAVCMWEILSFGKQP 210
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 100/224 (44%), Gaps = 12/224 (5%)
Query: 343 ATKGFKDKDVIGRGGFGKVYRGVLASNVQIAVKKV---SHDSKQGIK-EFVAELVSMGRL 398
A + F+ +G+G FG VY + I KV + K G++ + E+ L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 399 RHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLY 458
RH N+++L GY L+ +Y P G++ + L K + + I +A+ L Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 126
Query: 459 LHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPEL 518
H + V+HRDIKP N+LL + K+ DFG + H + L GT Y+ PE+
Sbjct: 127 CHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRAALCGTLDYLPPEM 180
Query: 519 MRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWV 562
+ D+++ GV E G+ P E ET + V
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 224
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 131/279 (46%), Gaps = 38/279 (13%)
Query: 353 IGRGGFGKVYRGVLASNVQ------IAVKKVSHDSKQGIK-EFVAELVSMGRLRHRNLVK 405
+G+G FG VY GV V+ +A+K V+ + + EF+ E M ++V+
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 406 LRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCL---------NWYQRFRIIRGVASGL 456
L G + L++ + M G L L + ++P + + + ++ +A G+
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRS-LRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 457 LYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDHDTIPQTTKLVGTFGYMD 515
YL+ + +HRD+ N ++ D K+GDFG+ R +Y+ D + K + +M
Sbjct: 146 AYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 202
Query: 516 PELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCDCWKKGAIRDA 574
PE ++ G +T +DV++FGV + E+A+ +P + + + + V +G + D
Sbjct: 203 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV-------MEGGLLDK 255
Query: 575 SDSRLEGICEEKQMELVLKLGLFCSHPKPEARPNMRQVM 613
D+ C +++ +L C P+ RP+ +++
Sbjct: 256 PDN-----CP----DMLFELMRMCWQYNPKMRPSFLEII 285
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 131/279 (46%), Gaps = 38/279 (13%)
Query: 353 IGRGGFGKVYRGVLASNVQ------IAVKKVSHDSKQGIK-EFVAELVSMGRLRHRNLVK 405
+G+G FG VY GV V+ +A+K V+ + + EF+ E M ++V+
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 83
Query: 406 LRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCL---------NWYQRFRIIRGVASGL 456
L G + L++ + M G L L + ++P + + + ++ +A G+
Sbjct: 84 LLGVVSQGQPTLVIMELMTRGDLKSYLRS-LRPEMENNPVLAPPSLSKMIQMAGEIADGM 142
Query: 457 LYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDHDTIPQTTKLVGTFGYMD 515
YL+ + +HRD+ N ++ D K+GDFG+ R +Y+ D + K + +M
Sbjct: 143 AYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 199
Query: 516 PELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCDCWKKGAIRDA 574
PE ++ G +T +DV++FGV + E+A+ +P + + + + V +G + D
Sbjct: 200 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV-------MEGGLLDK 252
Query: 575 SDSRLEGICEEKQMELVLKLGLFCSHPKPEARPNMRQVM 613
D+ C +++ +L C P+ RP+ +++
Sbjct: 253 PDN-----CP----DMLFELMRMCWQYNPKMRPSFLEII 282
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 101/224 (45%), Gaps = 12/224 (5%)
Query: 343 ATKGFKDKDVIGRGGFGKVYRGVLASNVQIAVKKV---SHDSKQGIK-EFVAELVSMGRL 398
A + F+ +G+G FG VY + I KV + K G++ + E+ L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 399 RHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLY 458
RH N+++L GY L+ +Y P G++ + L K + + I +A+ L Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 126
Query: 459 LHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPEL 518
H + V+HRDIKP N+LL + K+ +FG + H + T L GT Y+ PE+
Sbjct: 127 CHS---KRVIHRDIKPENLLLGSAGELKIANFGWS---VHAPSSRRTTLCGTLDYLPPEM 180
Query: 519 MRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWV 562
+ D+++ GV E G+ P E ET + V
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 224
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 131/279 (46%), Gaps = 38/279 (13%)
Query: 353 IGRGGFGKVYRGVLASNVQ------IAVKKVSHDSKQGIK-EFVAELVSMGRLRHRNLVK 405
+G+G FG VY GV V+ +A+K V+ + + EF+ E M ++V+
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 406 LRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCL---------NWYQRFRIIRGVASGL 456
L G + L++ + M G L L + ++P + + + ++ +A G+
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRS-LRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 457 LYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDHDTIPQTTKLVGTFGYMD 515
YL+ + +HRD+ N ++ D K+GDFG+ R +Y+ D + K + +M
Sbjct: 145 AYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 201
Query: 516 PELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCDCWKKGAIRDA 574
PE ++ G +T +DV++FGV + E+A+ +P + + + + V +G + D
Sbjct: 202 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV-------MEGGLLDK 254
Query: 575 SDSRLEGICEEKQMELVLKLGLFCSHPKPEARPNMRQVM 613
D+ C +++ +L C P+ RP+ +++
Sbjct: 255 PDN-----CP----DMLFELMRMCWQYNPKMRPSFLEII 284
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 131/279 (46%), Gaps = 38/279 (13%)
Query: 353 IGRGGFGKVYRGVLASNVQ------IAVKKVSHDSKQGIK-EFVAELVSMGRLRHRNLVK 405
+G+G FG VY GV V+ +A+K V+ + + EF+ E M ++V+
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 406 LRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCL---------NWYQRFRIIRGVASGL 456
L G + L++ + M G L L + ++P + + + ++ +A G+
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRS-LRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 457 LYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDHDTIPQTTKLVGTFGYMD 515
YL+ + +HRD+ N ++ D K+GDFG+ R +Y+ D + K + +M
Sbjct: 145 AYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 201
Query: 516 PELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCDCWKKGAIRDA 574
PE ++ G +T +DV++FGV + E+A+ +P + + + + V +G + D
Sbjct: 202 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV-------MEGGLLDK 254
Query: 575 SDSRLEGICEEKQMELVLKLGLFCSHPKPEARPNMRQVM 613
D+ C +++ +L C P+ RP+ +++
Sbjct: 255 PDN-----CP----DMLFELMRMCWQYNPKMRPSFLEII 284
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 100/224 (44%), Gaps = 12/224 (5%)
Query: 343 ATKGFKDKDVIGRGGFGKVYRGVLASNVQIAVKKV---SHDSKQGIK-EFVAELVSMGRL 398
A + F+ +G+G FG VY + I KV + K G++ + E+ L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 399 RHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLY 458
RH N+++L GY L+ +Y P G++ + L K + + I +A+ L Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 123
Query: 459 LHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPEL 518
H + V+HRDIKP N+LL + K+ DFG + H + L GT Y+ PE+
Sbjct: 124 CHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRAALCGTLDYLPPEM 177
Query: 519 MRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWV 562
+ D+++ GV E G+ P E ET + V
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 221
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 131/279 (46%), Gaps = 38/279 (13%)
Query: 353 IGRGGFGKVYRGVLASNVQ------IAVKKVSHDSKQGIK-EFVAELVSMGRLRHRNLVK 405
+G+G FG VY GV V+ +A+K V+ + + EF+ E M ++V+
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 406 LRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCL---------NWYQRFRIIRGVASGL 456
L G + L++ + M G L L + ++P + + + ++ +A G+
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRS-LRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 457 LYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDHDTIPQTTKLVGTFGYMD 515
YL+ + +HRD+ N + D K+GDFG+ R +Y+ D + K + +M
Sbjct: 139 AYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 195
Query: 516 PELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCDCWKKGAIRDA 574
PE ++ G +T +DV++FGV + E+A+ +P + + + + V +G + D
Sbjct: 196 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV-------MEGGLLDK 248
Query: 575 SDSRLEGICEEKQMELVLKLGLFCSHPKPEARPNMRQVM 613
D+ C +++L+L C P+ RP+ +++
Sbjct: 249 PDN-----CP----DMLLELMRMCWQYNPKMRPSFLEII 278
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 101/219 (46%), Gaps = 38/219 (17%)
Query: 351 DVIGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAE--LVSMGRLRHRNLVKL-- 406
++IGRG +G VY+G L +AVK S ++Q F+ E + + + H N+ +
Sbjct: 19 ELIGRGRYGAVYKGSLDER-PVAVKVFSFANRQN---FINEKNIYRVPLMEHDNIARFIV 74
Query: 407 ---RGYCRRKGEFLLVYDYMPNGSLDKI--LHTNIKPCLNWYQRFRIIRGVASGLLYLHE 461
R + E+LLV +Y PNGSL K LHT+ +W R+ V GL YLH
Sbjct: 75 GDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS-----DWVSSCRLAHSVTRGLAYLHT 129
Query: 462 D------WEQVVLHRDIKPANVLLDADLNGKLGDFGLA-RLYDHDTIP------QTTKLV 508
+ ++ + HRD+ NVL+ D + DFGL+ RL + + V
Sbjct: 130 ELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEV 189
Query: 509 GTFGYMDPELMRTG-------KASTSTDVYAFGVFMLEV 540
GT YM PE++ A D+YA G+ E+
Sbjct: 190 GTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 100/224 (44%), Gaps = 12/224 (5%)
Query: 343 ATKGFKDKDVIGRGGFGKVYRGVLASNVQIAVKKV---SHDSKQGIK-EFVAELVSMGRL 398
A + F+ +G+G FG VY + I KV + K G++ + E+ L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 399 RHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLY 458
RH N+++L GY L+ +Y P G++ + L K + + I +A+ L Y
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 124
Query: 459 LHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPEL 518
H + V+HRDIKP N+LL + K+ DFG + H + L GT Y+ PE+
Sbjct: 125 CHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRDTLCGTLDYLPPEM 178
Query: 519 MRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWV 562
+ D+++ GV E G+ P E ET + V
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 222
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 100/202 (49%), Gaps = 13/202 (6%)
Query: 352 VIGRGGFGKVYRGVLASN----VQIAVKKVSHDSKQGIKE-FVAELVSMGRLRHRNLVKL 406
++G G FG+VY GV ++ + +AVK D KE F++E V M L H ++VKL
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 407 RGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQV 466
G + ++++ Y P G L L N K L + + YL E +
Sbjct: 79 IGIIEEEPTWIIMELY-PYGELGHYLERN-KNSLKVLTLVLYSLQICKAMAYL----ESI 132
Query: 467 -VLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKAS 525
+HRDI N+L+ + KLGDFGL+R + + + + +M PE + + +
Sbjct: 133 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFT 192
Query: 526 TSTDVYAFGVFMLEVAS-GRRP 546
T++DV+ F V M E+ S G++P
Sbjct: 193 TASDVWMFAVCMWEILSFGKQP 214
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 131/279 (46%), Gaps = 38/279 (13%)
Query: 353 IGRGGFGKVYRGVLASNVQ------IAVKKVSHDSKQGIK-EFVAELVSMGRLRHRNLVK 405
+G+G FG VY GV V+ +A+K V+ + + EF+ E M ++V+
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 406 LRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCL---------NWYQRFRIIRGVASGL 456
L G + L++ + M G L L + ++P + + + ++ +A G+
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRS-LRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 457 LYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDHDTIPQTTKLVGTFGYMD 515
YL+ + +HRD+ N ++ D K+GDFG+ R +Y+ D + K + +M
Sbjct: 139 AYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMS 195
Query: 516 PELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCDCWKKGAIRDA 574
PE ++ G +T +DV++FGV + E+A+ +P + + + + V +G + D
Sbjct: 196 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV-------MEGGLLDK 248
Query: 575 SDSRLEGICEEKQMELVLKLGLFCSHPKPEARPNMRQVM 613
D+ C +++ +L C P+ RP+ +++
Sbjct: 249 PDN-----CP----DMLFELMRMCWQYNPKMRPSFLEII 278
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 100/202 (49%), Gaps = 13/202 (6%)
Query: 352 VIGRGGFGKVYRGVLASN----VQIAVKKVSHDSKQGIKE-FVAELVSMGRLRHRNLVKL 406
++G G FG+VY GV ++ + +AVK D KE F++E V M L H ++VKL
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 90
Query: 407 RGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQV 466
G + ++++ Y P G L L N K L + + YL E +
Sbjct: 91 IGIIEEEPTWIIMELY-PYGELGHYLERN-KNSLKVLTLVLYSLQICKAMAYL----ESI 144
Query: 467 -VLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKAS 525
+HRDI N+L+ + KLGDFGL+R + + + + +M PE + + +
Sbjct: 145 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFT 204
Query: 526 TSTDVYAFGVFMLEVAS-GRRP 546
T++DV+ F V M E+ S G++P
Sbjct: 205 TASDVWMFAVCMWEILSFGKQP 226
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 98/204 (48%), Gaps = 18/204 (8%)
Query: 351 DVIGRGGFGKVYRGVLASNVQIAV-KKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGY 409
+V+G+G FG+ + ++ V K++ ++ + F+ E+ M L H N++K G
Sbjct: 16 EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGV 75
Query: 410 CRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLH 469
+ + +Y+ G+L I+ + + W QR + +ASG+ YLH ++H
Sbjct: 76 LYKDKRLNFITEYIKGGTLRGIIKS-MDSQYPWSQRVSFAKDIASGMAYLHS---MNIIH 131
Query: 470 RDIKPANVLLDADLNGKLGDFGLARLY-DHDTIPQTTK------------LVGTFGYMDP 516
RD+ N L+ + N + DFGLARL D T P+ + +VG +M P
Sbjct: 132 RDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAP 191
Query: 517 ELMRTGKASTSTDVYAFGVFMLEV 540
E++ DV++FG+ + E+
Sbjct: 192 EMINGRSYDEKVDVFSFGIVLCEI 215
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 124/270 (45%), Gaps = 25/270 (9%)
Query: 347 FKDKDVIGRGGFGKVYRGVLASNVQIAVKKVS--HDSKQGIKEFVAELVSMGRLRHRNLV 404
F + IG+G FG+V++G+ ++ K+ +++ I++ E+ + + +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 405 KLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWE 464
K G + + ++ +Y+ GS +L L+ Q I+R + GL YLH + +
Sbjct: 89 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPG---PLDETQIATILREILKGLDYLHSEKK 145
Query: 465 QVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKA 524
+HRDIK ANVLL KL DFG+A I + T VGT +M PE+++
Sbjct: 146 ---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT-FVGTPFWMAPEVIKQSAY 201
Query: 525 STSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASDSRLEGICE 584
+ D+++ G+ +E+A G P + M+ + L I + LEG
Sbjct: 202 DSKADIWSLGITAIELARGEPPHSELHPMKVLFL------------IPKNNPPTLEGNYS 249
Query: 585 EKQMELVLKLGLFCSHPKPEARPNMRQVMQ 614
+ E V C + +P RP +++++
Sbjct: 250 KPLKEFVEA----CLNKEPSFRPTAKELLK 275
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 109/221 (49%), Gaps = 14/221 (6%)
Query: 347 FKDKDVIGRGGFGKVYRGVLASNVQIAVKKVSH-DSKQGIK-EFVAELVSMGRLRHRNLV 404
F+ +G G G V++ + + +K+ H + K I+ + + EL + +V
Sbjct: 11 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 70
Query: 405 KLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWE 464
G GE + ++M GSLD++L + + I V GL YL E +
Sbjct: 71 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSI--AVIKGLTYLRE--K 126
Query: 465 QVVLHRDIKPANVLLDADLNGKLGDFGLA-RLYDHDTIPQTTKLVGTFGYMDPELMRTGK 523
++HRD+KP+N+L+++ KL DFG++ +L D + VGT YM PE ++
Sbjct: 127 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDE----MANEFVGTRSYMSPERLQGTH 182
Query: 524 ASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWVCD 564
S +D+++ G+ ++E+A GR P + M L+D++ +
Sbjct: 183 YSVQSDIWSMGLSLVEMAVGRYP---RPPMAIFELLDYIVN 220
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 98/217 (45%), Gaps = 18/217 (8%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKV---SHDSKQGIK-EFVAELVSMGRLRHRNLVKLRG 408
+G+G FG VY + I KV + K G++ + E+ LRH N+++L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 409 YCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRI---IRGVASGLLYLHEDWEQ 465
Y L+ +Y P G++ + L L+ + R I +A+ L Y H +
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQK-----LSRFDEQRTATYITELANALSYCHS---K 131
Query: 466 VVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKAS 525
V+HRDIKP N+LL ++ K+ DFG + H + T L GT Y+ PE++
Sbjct: 132 RVIHRDIKPENLLLGSNGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHD 188
Query: 526 TSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWV 562
D+++ GV E G P E ET + V
Sbjct: 189 EKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRV 225
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 98/206 (47%), Gaps = 25/206 (12%)
Query: 353 IGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQG-IKEFVAELVSMGRLRHRNLVKLRGYC 410
IG G +G V ++A+KK+S Q + + E+ + R RH N++ +R
Sbjct: 51 IGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDIL 110
Query: 411 RRKG-----EFLLVYDYMPNGSLDKILHT----NIKPCLNWYQRFRIIRGVASGLLYLHE 461
R + +V D M L K+L + N C YQ R GL Y+H
Sbjct: 111 RASTLEAMRDVYIVQDLM-ETDLYKLLKSQQLSNDHICYFLYQILR-------GLKYIHS 162
Query: 462 DWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYD--HDTIPQTTKLVGTFGYMDPELM 519
VLHRD+KP+N+L++ + K+ DFGLAR+ D HD T+ V T Y PE+M
Sbjct: 163 ---ANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIM 219
Query: 520 RTGKAST-STDVYAFGVFMLEVASGR 544
K T S D+++ G + E+ S R
Sbjct: 220 LNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 100/224 (44%), Gaps = 12/224 (5%)
Query: 343 ATKGFKDKDVIGRGGFGKVYRGVLASNVQIAVKKV---SHDSKQGIK-EFVAELVSMGRL 398
A + F+ +G+G FG VY + I KV + K G++ + E+ L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 399 RHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLY 458
RH N+++L GY L+ +Y P G++ + L K + + I +A+ L Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 123
Query: 459 LHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPEL 518
H + V+HRDIKP N+LL + K+ DFG + H + L GT Y+ PE+
Sbjct: 124 CHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLCGTLDYLPPEM 177
Query: 519 MRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWV 562
+ D+++ GV E G+ P E ET + V
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 221
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 100/224 (44%), Gaps = 12/224 (5%)
Query: 343 ATKGFKDKDVIGRGGFGKVYRGVLASNVQIAVKKV---SHDSKQGIK-EFVAELVSMGRL 398
A + F+ +G+G FG VY + I KV + K G++ + E+ L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 399 RHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLY 458
RH N+++L GY L+ +Y P G++ + L K + + I +A+ L Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 126
Query: 459 LHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPEL 518
H + V+HRDIKP N+LL + K+ DFG + H + L GT Y+ PE+
Sbjct: 127 CHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLCGTLDYLPPEM 180
Query: 519 MRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWV 562
+ D+++ GV E G+ P E ET + V
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 224
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 103/206 (50%), Gaps = 17/206 (8%)
Query: 352 VIGRGGFGKVYRGV-----LASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKL 406
+G G +G+V V A V+I K + D + IK+ E+ L H N+VK
Sbjct: 14 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINAMLNHENVVKF 70
Query: 407 RGYCRRKGEF-LLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQ 465
G+ RR+G L +Y G L + +I QRF + +G++YLH
Sbjct: 71 YGH-RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG---I 124
Query: 466 VVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQ-TTKLVGTFGYMDPELMRTGK- 523
+ HRDIKP N+LLD N K+ DFGLA ++ ++ + K+ GT Y+ PEL++ +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 524 ASTSTDVYAFGVFMLEVASGRRPVEQ 549
+ DV++ G+ + + +G P +Q
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 105/215 (48%), Gaps = 9/215 (4%)
Query: 347 FKDKDVIGRGGFGKVYRGVLASNVQIAVKKVSH--DSKQGIKEFVAELVSMGRLRHRNLV 404
F + IG+G FG+V++G+ Q+ K+ +++ I++ E+ + + +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 405 KLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWE 464
K G + + ++ +Y+ GS +L + +Q +++ + GL YLH + +
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSALDLLRAG---PFDEFQIATMLKEILKGLDYLHSEKK 141
Query: 465 QVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKA 524
+HRDIK ANVLL + KL DFG+A I + T VGT +M PE+++
Sbjct: 142 ---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT-FVGTPFWMAPEVIQQSAY 197
Query: 525 STSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLV 559
+ D+++ G+ +E+A G P M + L+
Sbjct: 198 DSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLI 232
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 102/207 (49%), Gaps = 29/207 (14%)
Query: 351 DVIGRGGFGKVYRGV--LASNVQIAVKKVSHDSKQGIK-EFVAELVSMGRLRHRNLVKLR 407
D +G G + VY+G L N+ +A+K++ + ++G + E+ + L+H N+V L
Sbjct: 8 DKLGEGTYATVYKGKSKLTDNL-VALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLH 66
Query: 408 GYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQR-------FRIIRGVASGLLYLH 460
+ LV++Y LDK L + C N F+++RG+A Y H
Sbjct: 67 DIIHTEKSLTLVFEY-----LDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLA----YCH 117
Query: 461 EDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTT--KLVGTFGYMDPE- 517
Q VLHRD+KP N+L++ KL DFGLAR +IP T V T Y P+
Sbjct: 118 R---QKVLHRDLKPQNLLINERGELKLADFGLARA---KSIPTKTYDNEVVTLWYRPPDI 171
Query: 518 LMRTGKASTSTDVYAFGVFMLEVASGR 544
L+ + ST D++ G E+A+GR
Sbjct: 172 LLGSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 99/206 (48%), Gaps = 25/206 (12%)
Query: 353 IGRGGFGKVYRGVLASN-VQIAVKKVSHDSKQG-IKEFVAELVSMGRLRHRNLVKLRGYC 410
IG G +G V N V++A+KK+S Q + + E+ + RH N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 411 R-----RKGEFLLVYDYMPNGSLDKILHT----NIKPCLNWYQRFRIIRGVASGLLYLHE 461
R + + +V D M L K+L T N C YQ R GL Y+H
Sbjct: 93 RAPTIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILR-------GLKYIHS 144
Query: 462 DWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLY--DHDTIPQTTKLVGTFGYMDPELM 519
VLHRD+KP+N+LL+ + K+ DFGLAR+ DHD T+ V T Y PE+M
Sbjct: 145 ---ANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 201
Query: 520 RTGKAST-STDVYAFGVFMLEVASGR 544
K T S D+++ G + E+ S R
Sbjct: 202 LNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 124/270 (45%), Gaps = 25/270 (9%)
Query: 347 FKDKDVIGRGGFGKVYRGVLASNVQIAVKKVS--HDSKQGIKEFVAELVSMGRLRHRNLV 404
F + IG+G FG+V++G+ ++ K+ +++ I++ E+ + + +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 405 KLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWE 464
K G + + ++ +Y+ GS +L L+ Q I+R + GL YLH + +
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPG---PLDETQIATILREILKGLDYLHSEKK 125
Query: 465 QVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKA 524
+HRDIK ANVLL KL DFG+A I + T VGT +M PE+++
Sbjct: 126 ---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT-FVGTPFWMAPEVIKQSAY 181
Query: 525 STSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASDSRLEGICE 584
+ D+++ G+ +E+A G P + M+ + L I + LEG
Sbjct: 182 DSKADIWSLGITAIELARGEPPHSELHPMKVLFL------------IPKNNPPTLEGNYS 229
Query: 585 EKQMELVLKLGLFCSHPKPEARPNMRQVMQ 614
+ E V C + +P RP +++++
Sbjct: 230 KPLKEFVEA----CLNKEPSFRPTAKELLK 255
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 104/224 (46%), Gaps = 20/224 (8%)
Query: 353 IGRGGFGKVYRGVLA------SNVQIAVKKVSH-DSKQGIKEFVAELVSMGRLRHRNLVK 405
+G G FG+VY G ++ S +Q+AVK + S+Q +F+ E + + + H+N+V+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 406 LRGYCRRKGEFLLVYDYMPNGSLDKIL-HTNIKPC----LNWYQRFRIIRGVASGLLYLH 460
G + ++ + M G L L T +P L + R +A G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 461 EDWEQVVLHRDIKPANVLLDADLNG---KLGDFGLAR-LYDHDTIPQTTKLVGTFGYMDP 516
E+ +HRDI N LL G K+GDFG+A+ +Y + + +M P
Sbjct: 159 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPP 215
Query: 517 ELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLV 559
E G ++ TD ++FGV + E+ S G P + + E + V
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV 259
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 97/195 (49%), Gaps = 5/195 (2%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCRR 412
+G G FG+V+ G ++ ++AVK + + ++ F+ E M L+H LV+L +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 413 KGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDI 472
+ ++ ++M GSL L ++ + + +A G+ Y+ + +HRD+
Sbjct: 79 EEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER---KNYIHRDL 135
Query: 473 KPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDVYA 532
+ ANVL+ L K+ DFGLAR+ + + + PE + G + ++V++
Sbjct: 136 RAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVWS 195
Query: 533 FGVFMLEVAS-GRRP 546
FG+ + E+ + G+ P
Sbjct: 196 FGILLYEIVTYGKIP 210
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 110/228 (48%), Gaps = 18/228 (7%)
Query: 347 FKDKDVIGRGGFGKVYRGVLASNVQIAVKKVSH-DSKQGIK-EFVAELVSMGRLRHRNLV 404
F+ +G G G V++ + + +K+ H + K I+ + + EL + +V
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 405 KLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWE 464
G GE + ++M GSLD++L + + I V GL YL E +
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSI--AVIKGLTYLRE--K 123
Query: 465 QVVLHRDIKPANVLLDADLNGKLGDFGLA-RLYDHDTIPQTTKLVGTFGYMDPELMRTGK 523
++HRD+KP+N+L+++ KL DFG++ +L D VGT YM PE ++
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTH 179
Query: 524 ASTSTDVYAFGVFMLEVASGRRPV-------EQQGSMETVNLVDWVCD 564
S +D+++ G+ ++E+A GR P+ + + M L+D++ +
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVN 227
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 114/258 (44%), Gaps = 25/258 (9%)
Query: 319 YEEVYEDWEREYGPQRFTYK-----DLYKATKGFKDKDVIGRGGFGKVYRGVLASNVQIA 373
Y++ YED ++Y PQ K D Y + +G G FG V+R V + ++
Sbjct: 26 YDKFYEDIWKKYVPQPVEVKQGSVYDYYDIL------EELGSGAFGVVHRCVEKATGRVF 79
Query: 374 VKKVSHDSKQGIKEFVAELVS-MGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSL-DKI 431
V K + K V +S M +L H L+ L K E +L+ +++ G L D+I
Sbjct: 80 VAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRI 139
Query: 432 LHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNG--KLGD 489
+ K ++ + +R GL ++HE ++H DIKP N++ + K+ D
Sbjct: 140 AAEDYK--MSEAEVINYMRQACEGLKHMHE---HSIVHLDIKPENIMCETKKASSVKIID 194
Query: 490 FGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEVASGRRPVEQ 549
FGLA + D I + T F PE++ TD++A GV + SG P
Sbjct: 195 FGLATKLNPDEIVKVTTATAEFAA--PEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAG 252
Query: 550 QGSMET---VNLVDWVCD 564
+ +ET V DW D
Sbjct: 253 EDDLETLQNVKRCDWEFD 270
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 100/224 (44%), Gaps = 12/224 (5%)
Query: 343 ATKGFKDKDVIGRGGFGKVYRGVLASNVQIAVKKV---SHDSKQGIK-EFVAELVSMGRL 398
A + F+ +G+G FG VY + I KV + K G++ + E+ L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 399 RHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLY 458
RH N+++L GY L+ +Y P G++ + L K + + I +A+ L Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 126
Query: 459 LHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPEL 518
H + V+HRDIKP N+LL + K+ DFG + H + L GT Y+ PE+
Sbjct: 127 CHS---KRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRDDLCGTLDYLPPEM 180
Query: 519 MRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWV 562
+ D+++ GV E G+ P E ET + V
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV 224
>pdb|1GNZ|A Chain A, Lectin I-B4 From Griffonia Simplicifolia (Gs I-B4)metal
Free Form
Length = 257
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 108/226 (47%), Gaps = 41/226 (18%)
Query: 53 GLLQLTNTV---SPQQ--EGHAFYRLPIK-FNTXXXXXXXXXXNFVF---------AIGM 97
G LQL T +P Q G A Y P++ ++ F F A G+
Sbjct: 31 GTLQLCKTNQYGTPLQWSAGRALYSDPVQLWDNKTESVASFYTEFTFFLKITGNGPADGL 90
Query: 98 AFVISPS----KDLGKAEASPSEYLGLFNASNNGQ-STNHILAIELDTVQNLDFDDIDDN 152
AF ++P KD G EYLGLFN S Q S N ++A+E DT N +F +
Sbjct: 91 AFFLAPPDSDVKDAG-------EYLGLFNKSTATQPSKNQVVAVEFDTWTNPNFPEPSYR 143
Query: 153 HVGIDVNSLISHESAPAAYFSDREGMNKTLELIIGDPIQIWISYDGAEKLLNVTLAPMSI 212
H+GI+VNS++ S + D ++ G ISYDG+ ++L V L S
Sbjct: 144 HIGINVNSIV---SVATKRWEDS-------DIFSGKIATARISYDGSAEILTVVL---SY 190
Query: 213 PKPTKPLLSRAINLSHILLETMYVGFSASTGSLKS-SHYVLGWSFN 257
P + +LS ++++ L E++ VG SASTG+ + + Y+L W F+
Sbjct: 191 PDGSDYILSHSVDMRQNLPESVRVGISASTGNNQFLTVYILSWRFS 236
>pdb|1HQL|A Chain A, The Xenograft Antigen In Complex With The B4 Isolectin Of
Griffonia Simplicifolia Lectin-1
pdb|1HQL|B Chain B, The Xenograft Antigen In Complex With The B4 Isolectin Of
Griffonia Simplicifolia Lectin-1
Length = 257
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 118/264 (44%), Gaps = 52/264 (19%)
Query: 15 CASFIFSALAQDVNQFIYHGFNEDAQLQRDGLASVHSNGLLQLTNTV---SPQQ--EGHA 69
SF F DV I F DA + G LQL T +P Q G A
Sbjct: 4 SVSFTFPNFWSDVEDSII--FQGDANT---------TAGTLQLCKTNQYGTPLQWSAGRA 52
Query: 70 FYRLPIK-FNTXXXXXXXXXXNFVF---------AIGMAFVISPS----KDLGKAEASPS 115
Y P++ ++ F F A G+AF ++P KD G
Sbjct: 53 LYSDPVQLWDNKTESVASFYTEFTFFLKITGNGPADGLAFFLAPPDSDVKDAG------- 105
Query: 116 EYLGLFNASNNGQ-STNHILAIELDTVQNLDFDDIDDNHVGIDVNSLISHESAPAAYFSD 174
EYLGLFN S Q S N ++A+E DT N +F + H+GI+VNS++ S + D
Sbjct: 106 EYLGLFNKSTATQPSKNQVVAVEFDTWTNPNFPEPSYRHIGINVNSIV---SVATKRWED 162
Query: 175 REGMNKTLELIIGDPIQIWISYDGAEKLLNVTLAPMSIPKPTKPLLSRAINLSHILLETM 234
++ G ISYDG+ ++L V L S P + +LS ++++ L E++
Sbjct: 163 S-------DIFSGKIATARISYDGSAEILTVVL---SYPDGSDYILSHSVDMRQNLPESV 212
Query: 235 YVGFSASTGSLKS-SHYVLGWSFN 257
VG SASTG+ + + Y+L W F+
Sbjct: 213 RVGISASTGNNQFLTVYILSWRFS 236
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 103/206 (50%), Gaps = 17/206 (8%)
Query: 352 VIGRGGFGKVYRGV-----LASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKL 406
+G G +G+V V A V+I K + D + IK+ E+ L H N+VK
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKF 69
Query: 407 RGYCRRKGEF-LLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQ 465
G+ RR+G L +Y G L + +I QRF + +G++YLH
Sbjct: 70 YGH-RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG---I 123
Query: 466 VVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQ-TTKLVGTFGYMDPELMRTGK- 523
+ HRDIKP N+LLD N K+ DFGLA ++ ++ + K+ GT Y+ PEL++ +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 524 ASTSTDVYAFGVFMLEVASGRRPVEQ 549
+ DV++ G+ + + +G P +Q
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 103/206 (50%), Gaps = 17/206 (8%)
Query: 352 VIGRGGFGKVYRGV-----LASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKL 406
+G G +G+V V A V+I K + D + IK+ E+ L H N+VK
Sbjct: 14 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKF 70
Query: 407 RGYCRRKGEF-LLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQ 465
G+ RR+G L +Y G L + +I QRF + +G++YLH
Sbjct: 71 YGH-RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG---I 124
Query: 466 VVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQ-TTKLVGTFGYMDPELMRTGK- 523
+ HRDIKP N+LLD N K+ DFGLA ++ ++ + K+ GT Y+ PEL++ +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 524 ASTSTDVYAFGVFMLEVASGRRPVEQ 549
+ DV++ G+ + + +G P +Q
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 103/206 (50%), Gaps = 17/206 (8%)
Query: 352 VIGRGGFGKVYRGV-----LASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKL 406
+G G +G+V V A V+I K + D + IK+ E+ L H N+VK
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKF 69
Query: 407 RGYCRRKGEF-LLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQ 465
G+ RR+G L +Y G L + +I QRF + +G++YLH
Sbjct: 70 YGH-RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG---I 123
Query: 466 VVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQ-TTKLVGTFGYMDPELMRTGK- 523
+ HRDIKP N+LLD N K+ DFGLA ++ ++ + K+ GT Y+ PEL++ +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 524 ASTSTDVYAFGVFMLEVASGRRPVEQ 549
+ DV++ G+ + + +G P +Q
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 101/224 (45%), Gaps = 12/224 (5%)
Query: 343 ATKGFKDKDVIGRGGFGKVYRGVLASNVQIAVKKV---SHDSKQGIK-EFVAELVSMGRL 398
A + F+ +G+G FG VY ++ I KV + K G++ + E+ L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 399 RHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLY 458
RH N+++L GY L+ +Y P G++ + L K + + I +A+ L Y
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSY 123
Query: 459 LHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPEL 518
H + V+HRDIKP N+LL + K+ DFG + H + L GT Y+ PE+
Sbjct: 124 CHS---KKVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRAALCGTLDYLPPEM 177
Query: 519 MRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWV 562
+ D+++ GV E G+ P E +T + V
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRV 221
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 103/206 (50%), Gaps = 17/206 (8%)
Query: 352 VIGRGGFGKVYRGV-----LASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKL 406
+G G +G+V V A V+I K + D + IK+ E+ L H N+VK
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKF 69
Query: 407 RGYCRRKGEF-LLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQ 465
G+ RR+G L +Y G L + +I QRF + +G++YLH
Sbjct: 70 YGH-RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG---I 123
Query: 466 VVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQ-TTKLVGTFGYMDPELMRTGK- 523
+ HRDIKP N+LLD N K+ DFGLA ++ ++ + K+ GT Y+ PEL++ +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 524 ASTSTDVYAFGVFMLEVASGRRPVEQ 549
+ DV++ G+ + + +G P +Q
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 106/215 (49%), Gaps = 9/215 (4%)
Query: 347 FKDKDVIGRGGFGKVYRGVLASNVQIAVKKVS--HDSKQGIKEFVAELVSMGRLRHRNLV 404
F + IG+G FG+V++G+ ++ K+ +++ I++ E+ + + +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 405 KLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWE 464
K G + + ++ +Y+ GS +L L+ Q I+R + GL YLH + +
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPG---PLDETQIATILREILKGLDYLHSEKK 140
Query: 465 QVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKA 524
+HRDIK ANVLL KL DFG+A DT + VGT +M PE+++
Sbjct: 141 ---IHRDIKAANVLLSEHGEVKLADFGVAGQLT-DTQIKRNXFVGTPFWMAPEVIKQSAY 196
Query: 525 STSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLV 559
+ D+++ G+ +E+A G P + M+ + L+
Sbjct: 197 DSKADIWSLGITAIELARGEPPHSELHPMKVLFLI 231
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 103/206 (50%), Gaps = 17/206 (8%)
Query: 352 VIGRGGFGKVYRGV-----LASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKL 406
+G G +G+V V A V+I K + D + IK+ E+ L H N+VK
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKF 69
Query: 407 RGYCRRKGEF-LLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQ 465
G+ RR+G L +Y G L + +I QRF + +G++YLH
Sbjct: 70 YGH-RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG---I 123
Query: 466 VVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQ-TTKLVGTFGYMDPELMRTGK- 523
+ HRDIKP N+LLD N K+ DFGLA ++ ++ + K+ GT Y+ PEL++ +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 524 ASTSTDVYAFGVFMLEVASGRRPVEQ 549
+ DV++ G+ + + +G P +Q
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 102/208 (49%), Gaps = 8/208 (3%)
Query: 353 IGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCR 411
IG+G G VY + +A+ ++A+++++ + + + E++ M ++ N+V
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 412 RKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRD 471
E +V +Y+ GSL ++ + C++ Q + R L +LH + V+HRD
Sbjct: 88 VGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLHSNQ---VIHRD 141
Query: 472 IKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDVY 531
IK N+LL D + KL DFG + ++T +VGT +M PE++ D++
Sbjct: 142 IKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST-MVGTPYWMAPEVVTRKAYGPKVDIW 200
Query: 532 AFGVFMLEVASGRRPVEQQGSMETVNLV 559
+ G+ +E+ G P + + + L+
Sbjct: 201 SLGIMAIEMIEGEPPYLNENPLRALYLI 228
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 97/198 (48%), Gaps = 14/198 (7%)
Query: 353 IGRGGFGKVYRGVLA----SNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRG 408
IG G G V LA S Q+AVK + +Q + E+V M +H N+V++
Sbjct: 53 IGEGSTGIV---CLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYK 109
Query: 409 YCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVL 468
E ++ +++ G+L I+ + ++ LN Q + V L YLH Q V+
Sbjct: 110 SYLVGEELWVLMEFLQGGALTDIV-SQVR--LNEEQIATVCEAVLQALAYLHA---QGVI 163
Query: 469 HRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTST 528
HRDIK ++LL D KL DFG D +P+ LVGT +M PE++ +T
Sbjct: 164 HRDIKSDSILLTLDGRVKLSDFGFCAQISKD-VPKRKXLVGTPYWMAPEVISRSLYATEV 222
Query: 529 DVYAFGVFMLEVASGRRP 546
D+++ G+ ++E+ G P
Sbjct: 223 DIWSLGIMVIEMVDGEPP 240
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 103/206 (50%), Gaps = 17/206 (8%)
Query: 352 VIGRGGFGKVYRGV-----LASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKL 406
+G G +G+V V A V+I K + D + IK+ E+ L H N+VK
Sbjct: 14 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKF 70
Query: 407 RGYCRRKGEF-LLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQ 465
G+ RR+G L +Y G L + +I QRF + +G++YLH
Sbjct: 71 YGH-RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG---I 124
Query: 466 VVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQ-TTKLVGTFGYMDPELMRTGK- 523
+ HRDIKP N+LLD N K+ DFGLA ++ ++ + K+ GT Y+ PEL++ +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 524 ASTSTDVYAFGVFMLEVASGRRPVEQ 549
+ DV++ G+ + + +G P +Q
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 100/205 (48%), Gaps = 15/205 (7%)
Query: 352 VIGRGGFGKVYRGV-----LASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKL 406
+G G +G+V V A V+I K + D + IK+ E+ L H N+VK
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKF 69
Query: 407 RGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQV 466
G+ R L +Y G L + +I QRF + +G++YLH
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG---IG 124
Query: 467 VLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQ-TTKLVGTFGYMDPELMRTGK-A 524
+ HRDIKP N+LLD N K+ DFGLA ++ ++ + K+ GT Y+ PEL++ +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 525 STSTDVYAFGVFMLEVASGRRPVEQ 549
+ DV++ G+ + + +G P +Q
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 101/204 (49%), Gaps = 11/204 (5%)
Query: 347 FKDKDVIGRGGFGKVYRGVLASNVQIAVKKVSH-DSKQGIK-EFVAELVSMGRLRHRNLV 404
F+ +G G G V++ + + +K+ H + K I+ + + EL + +V
Sbjct: 70 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 129
Query: 405 KLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWE 464
G GE + ++M GSLD++L + + I V GL YL E +
Sbjct: 130 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSI--AVIKGLTYLREKHK 187
Query: 465 QVVLHRDIKPANVLLDADLNGKLGDFGLA-RLYDHDTIPQTTKLVGTFGYMDPELMRTGK 523
++HRD+KP+N+L+++ KL DFG++ +L D VGT YM PE ++
Sbjct: 188 --IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTH 241
Query: 524 ASTSTDVYAFGVFMLEVASGRRPV 547
S +D+++ G+ ++E+A GR P+
Sbjct: 242 YSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 100/205 (48%), Gaps = 15/205 (7%)
Query: 352 VIGRGGFGKVYRGV-----LASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKL 406
+G G +G+V V A V+I K + D + IK+ E+ L H N+VK
Sbjct: 14 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKF 70
Query: 407 RGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQV 466
G+ R L +Y G L + +I QRF + +G++YLH
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG---IG 125
Query: 467 VLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQ-TTKLVGTFGYMDPELMRTGK-A 524
+ HRDIKP N+LLD N K+ DFGLA ++ ++ + K+ GT Y+ PEL++ +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 525 STSTDVYAFGVFMLEVASGRRPVEQ 549
+ DV++ G+ + + +G P +Q
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 131/279 (46%), Gaps = 38/279 (13%)
Query: 353 IGRGGFGKVYRGVLASNVQ------IAVKKVSHDSKQGIK-EFVAELVSMGRLRHRNLVK 405
+G+G FG VY GV V+ +A+K V+ + + EF+ E M ++V+
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 77
Query: 406 LRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCL---------NWYQRFRIIRGVASGL 456
L G + L++ + M G L L + ++P + + + ++ +A G+
Sbjct: 78 LLGVVSQGQPTLVIMELMTRGDLKSYLRS-LRPEMENNPVLAPPSLSKMIQMAGEIADGM 136
Query: 457 LYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDHDTIPQTTKLVGTFGYMD 515
YL+ + +HRD+ N ++ D K+GDFG+ R + + D + K + +M
Sbjct: 137 AYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMS 193
Query: 516 PELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCDCWKKGAIRDA 574
PE ++ G +T +DV++FGV + E+A+ +P + + + + V +G + D
Sbjct: 194 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV-------MEGGLLDK 246
Query: 575 SDSRLEGICEEKQMELVLKLGLFCSHPKPEARPNMRQVM 613
D+ C +++L+L C P+ RP+ +++
Sbjct: 247 PDN-----CP----DMLLELMRMCWQYNPKMRPSFLEII 276
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 99/207 (47%), Gaps = 10/207 (4%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDS---KQGIKEFVAELVSMGR-LRHRNLVKLRG 408
+G+GGF K + A ++ K+ S K +E ++ +S+ R L H+++V G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 409 YCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVL 468
+ +V + SL + LH K R+ +R + G YLH + V+
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARY-YLRQIVLGCQYLHRNR---VI 139
Query: 469 HRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTST 528
HRD+K N+ L+ DL K+GDFGLA ++D + T L GT Y+ PE++ S
Sbjct: 140 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKGHSFEV 198
Query: 529 DVYAFGVFMLEVASGRRPVEQQGSMET 555
DV++ G M + G+ P E ET
Sbjct: 199 DVWSIGCIMYTLLVGKPPFETSCLKET 225
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 103/206 (50%), Gaps = 17/206 (8%)
Query: 352 VIGRGGFGKVYRGV-----LASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKL 406
+G G +G+V V A V+I K + D + IK+ E+ L H N+VK
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKF 69
Query: 407 RGYCRRKGEF-LLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQ 465
G+ RR+G L +Y G L + +I QRF + +G++YLH
Sbjct: 70 YGH-RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG---I 123
Query: 466 VVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQ-TTKLVGTFGYMDPELMRTGK- 523
+ HRDIKP N+LLD N K+ DFGLA ++ ++ + K+ GT Y+ PEL++ +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 524 ASTSTDVYAFGVFMLEVASGRRPVEQ 549
+ DV++ G+ + + +G P +Q
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 103/206 (50%), Gaps = 17/206 (8%)
Query: 352 VIGRGGFGKVYRGV-----LASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKL 406
+G G +G+V V A V+I K + D + IK+ E+ L H N+VK
Sbjct: 12 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKF 68
Query: 407 RGYCRRKGEF-LLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQ 465
G+ RR+G L +Y G L + +I QRF + +G++YLH
Sbjct: 69 YGH-RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG---I 122
Query: 466 VVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQ-TTKLVGTFGYMDPELMRTGK- 523
+ HRDIKP N+LLD N K+ DFGLA ++ ++ + K+ GT Y+ PEL++ +
Sbjct: 123 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 182
Query: 524 ASTSTDVYAFGVFMLEVASGRRPVEQ 549
+ DV++ G+ + + +G P +Q
Sbjct: 183 HAEPVDVWSCGIVLTAMLAGELPWDQ 208
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 100/205 (48%), Gaps = 15/205 (7%)
Query: 352 VIGRGGFGKVYRGV-----LASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKL 406
+G G +G+V V A V+I K + D + IK+ E+ L H N+VK
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKF 69
Query: 407 RGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQV 466
G+ R L +Y G L + +I QRF + +G++YLH
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG---IG 124
Query: 467 VLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQ-TTKLVGTFGYMDPELMRTGK-A 524
+ HRDIKP N+LLD N K+ DFGLA ++ ++ + K+ GT Y+ PEL++ +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 525 STSTDVYAFGVFMLEVASGRRPVEQ 549
+ DV++ G+ + + +G P +Q
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 99/207 (47%), Gaps = 10/207 (4%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDS---KQGIKEFVAELVSMGR-LRHRNLVKLRG 408
+G+GGF K + A ++ K+ S K +E ++ +S+ R L H+++V G
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 409 YCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVL 468
+ +V + SL + LH K R+ +R + G YLH + V+
Sbjct: 89 FFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARY-YLRQIVLGCQYLHRNR---VI 143
Query: 469 HRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTST 528
HRD+K N+ L+ DL K+GDFGLA ++D + T L GT Y+ PE++ S
Sbjct: 144 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKGHSFEV 202
Query: 529 DVYAFGVFMLEVASGRRPVEQQGSMET 555
DV++ G M + G+ P E ET
Sbjct: 203 DVWSIGCIMYTLLVGKPPFETSCLKET 229
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 103/206 (50%), Gaps = 17/206 (8%)
Query: 352 VIGRGGFGKVYRGV-----LASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKL 406
+G G +G+V V A V+I K + D + IK+ E+ L H N+VK
Sbjct: 14 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKF 70
Query: 407 RGYCRRKGEF-LLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQ 465
G+ RR+G L +Y G L + +I QRF + +G++YLH
Sbjct: 71 YGH-RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG---I 124
Query: 466 VVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQ-TTKLVGTFGYMDPELMRTGK- 523
+ HRDIKP N+LLD N K+ DFGLA ++ ++ + K+ GT Y+ PEL++ +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 524 ASTSTDVYAFGVFMLEVASGRRPVEQ 549
+ DV++ G+ + + +G P +Q
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 103/206 (50%), Gaps = 17/206 (8%)
Query: 352 VIGRGGFGKVYRGV-----LASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKL 406
+G G +G+V V A V+I K + D + IK+ E+ L H N+VK
Sbjct: 14 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKF 70
Query: 407 RGYCRRKGEF-LLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQ 465
G+ RR+G L +Y G L + +I QRF + +G++YLH
Sbjct: 71 YGH-RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG---I 124
Query: 466 VVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQ-TTKLVGTFGYMDPELMRTGK- 523
+ HRDIKP N+LLD N K+ DFGLA ++ ++ + K+ GT Y+ PEL++ +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 524 ASTSTDVYAFGVFMLEVASGRRPVEQ 549
+ DV++ G+ + + +G P +Q
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 103/206 (50%), Gaps = 17/206 (8%)
Query: 352 VIGRGGFGKVYRGV-----LASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKL 406
+G G +G+V V A V+I K + D + IK+ E+ L H N+VK
Sbjct: 14 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKF 70
Query: 407 RGYCRRKGEF-LLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQ 465
G+ RR+G L +Y G L + +I QRF + +G++YLH
Sbjct: 71 YGH-RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG---I 124
Query: 466 VVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQ-TTKLVGTFGYMDPELMRTGK- 523
+ HRDIKP N+LLD N K+ DFGLA ++ ++ + K+ GT Y+ PEL++ +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 524 ASTSTDVYAFGVFMLEVASGRRPVEQ 549
+ DV++ G+ + + +G P +Q
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 99/207 (47%), Gaps = 10/207 (4%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDS---KQGIKEFVAELVSMGR-LRHRNLVKLRG 408
+G+GGF K + A ++ K+ S K +E ++ +S+ R L H+++V G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 409 YCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVL 468
+ +V + SL + LH K R+ +R + G YLH + V+
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARY-YLRQIVLGCQYLHRNR---VI 139
Query: 469 HRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTST 528
HRD+K N+ L+ DL K+GDFGLA ++D + T L GT Y+ PE++ S
Sbjct: 140 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKGHSFEV 198
Query: 529 DVYAFGVFMLEVASGRRPVEQQGSMET 555
DV++ G M + G+ P E ET
Sbjct: 199 DVWSIGCIMYTLLVGKPPFETSCLKET 225
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 124/270 (45%), Gaps = 25/270 (9%)
Query: 347 FKDKDVIGRGGFGKVYRGVLASNVQIAVKKVS--HDSKQGIKEFVAELVSMGRLRHRNLV 404
F + IG+G FG+V++G+ ++ K+ +++ I++ E+ + + +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 405 KLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWE 464
K G + + ++ +Y+ GS +L L+ Q I+R + GL YLH + +
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPG---PLDETQIATILREILKGLDYLHSEKK 125
Query: 465 QVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKA 524
+HRDIK ANVLL KL DFG+A DT + VGT +M PE+++
Sbjct: 126 ---IHRDIKAANVLLSEHGEVKLADFGVAGQLT-DTQIKRNXFVGTPFWMAPEVIKQSAY 181
Query: 525 STSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASDSRLEGICE 584
+ D+++ G+ +E+A G P + M+ + L I + LEG
Sbjct: 182 DSKADIWSLGITAIELARGEPPHSELHPMKVLFL------------IPKNNPPTLEGNYS 229
Query: 585 EKQMELVLKLGLFCSHPKPEARPNMRQVMQ 614
+ E V C + +P RP +++++
Sbjct: 230 KPLKEFVEA----CLNKEPSFRPTAKELLK 255
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 114/227 (50%), Gaps = 23/227 (10%)
Query: 331 GPQRFTYKDLYKATKGFKDKDVIGRGGFGKVYRGVLASNV----QIAVKKVSH---DSKQ 383
GP F + +K + V+G+G FG+V +L + + AVK +S K
Sbjct: 18 GPGMFVQHSTAIFSDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKT 74
Query: 384 GIKEFVAELVSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSL-DKILHTNIKPCLNW 442
+ + E+ + +L H N++KL + KG F LV + G L D+I+ + +
Sbjct: 75 DKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIIS---RKRFSE 131
Query: 443 YQRFRIIRGVASGLLYLHEDWEQVVLHRDIKPANVLLDA---DLNGKLGDFGLARLYDHD 499
RIIR V SG+ Y+H++ ++HRD+KP N+LL++ D N ++ DFGL+ ++
Sbjct: 132 VDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS 188
Query: 500 TIPQTTKLVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEVASGRRP 546
+ +GT Y+ PE++ G DV++ GV + + SG P
Sbjct: 189 --KKMKDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPP 232
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 122/250 (48%), Gaps = 24/250 (9%)
Query: 351 DVIGRGGFGKVYR-GVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGY 409
+++G G FG+V++ A+ +++A K + + +E E+ M +L H NL++L
Sbjct: 95 EILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDA 154
Query: 410 CRRKGEFLLVYDYMPNGSL-DKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVL 468
K + +LV +Y+ G L D+I+ + L ++ + G+ ++H+ + +L
Sbjct: 155 FESKNDIVLVMEYVDGGELFDRIIDESYN--LTELDTILFMKQICEGIRHMHQMY---IL 209
Query: 469 HRDIKPANVL-LDADLNG-KLGDFGLARLYDHDTIPQTTKLV--GTFGYMDPELMRTGKA 524
H D+KP N+L ++ D K+ DFGLAR Y P+ V GT ++ PE++
Sbjct: 210 HLDLKPENILCVNRDAKQIKIIDFGLARRYK----PREKLKVNFGTPEFLAPEVVNYDFV 265
Query: 525 STSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASDSRLEGICE 584
S TD+++ GV + SG P ET+N + C W D D + I E
Sbjct: 266 SFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNI-LACR-W------DLEDEEFQDISE 317
Query: 585 EKQMELVLKL 594
E + E + KL
Sbjct: 318 EAK-EFISKL 326
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 103/210 (49%), Gaps = 11/210 (5%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKV-SHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCR 411
+G G FGKVY+ +A KV S++ +++++ E+ + H +VKL G
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 412 RKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRD 471
G+ ++ ++ P G++D I+ + L Q + R + L +LH + ++HRD
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIM-LELDRGLTEPQIQVVCRQMLEALNFLH---SKRIIHRD 134
Query: 472 IKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPEL-----MRTGKAST 526
+K NVL+ + + +L DFG++ + T+ + +GT +M PE+ M+
Sbjct: 135 LKAGNVLMTLEGDIRLADFGVSA-KNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDY 193
Query: 527 STDVYAFGVFMLEVASGRRPVEQQGSMETV 556
D+++ G+ ++E+A P + M +
Sbjct: 194 KADIWSLGITLIEMAQIEPPHHELNPMRVL 223
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 101/204 (49%), Gaps = 11/204 (5%)
Query: 347 FKDKDVIGRGGFGKVYRGVLASNVQIAVKKVSH-DSKQGIK-EFVAELVSMGRLRHRNLV 404
F+ +G G G V++ + + +K+ H + K I+ + + EL + +V
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 405 KLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWE 464
G GE + ++M GSLD++L + + I V GL YL E +
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSI--AVIKGLTYLRE--K 123
Query: 465 QVVLHRDIKPANVLLDADLNGKLGDFGLA-RLYDHDTIPQTTKLVGTFGYMDPELMRTGK 523
++HRD+KP+N+L+++ KL DFG++ +L D VGT YM PE ++
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTH 179
Query: 524 ASTSTDVYAFGVFMLEVASGRRPV 547
S +D+++ G+ ++E+A GR P+
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 125/277 (45%), Gaps = 34/277 (12%)
Query: 353 IGRGGFGKVYRGVL------ASNVQIAVKKVSHDSKQGIK-EFVAELVSMGRLRHRNLVK 405
+G+G FG VY G + ++AVK V+ + + EF+ E M ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 406 LRGYCRRKGEFLLVYDYMPNGSLDKILHT--------NIKPCLNWYQRFRIIRGVASGLL 457
L G + L+V + M +G L L + +P + ++ +A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 458 YLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDHDTIPQTTKLVGTFGYMDP 516
YL+ + +HRD+ N ++ D K+GDFG+ R +Y+ D + K + +M P
Sbjct: 145 YLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 517 ELMRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASD 576
E ++ G +TS+D+++FGV + E+ S Q S E V + +V D G D D
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQV--LKFVMD----GGYLDQPD 255
Query: 577 SRLEGICEEKQMELVLKLGLFCSHPKPEARPNMRQVM 613
+ C E+ V L C P+ RP +++
Sbjct: 256 N-----CPER----VTDLMRMCWQFNPKMRPTFLEIV 283
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 105/209 (50%), Gaps = 10/209 (4%)
Query: 353 IGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCR 411
IG+G G VY + +A+ ++A+++++ + + + E++ M ++ N+V
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 412 RKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRD 471
E +V +Y+ GSL ++ + C++ Q + R L +LH + V+HRD
Sbjct: 88 VGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLHSNQ---VIHRD 141
Query: 472 IKPANVLLDADLNGKLGDFGL-ARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDV 530
IK N+LL D + KL DFG A++ + + +++VGT +M PE++ D+
Sbjct: 142 IKSDNILLGMDGSVKLTDFGFCAQITPEQS--KRSEMVGTPYWMAPEVVTRKAYGPKVDI 199
Query: 531 YAFGVFMLEVASGRRPVEQQGSMETVNLV 559
++ G+ +E+ G P + + + L+
Sbjct: 200 WSLGIMAIEMIEGEPPYLNENPLRALYLI 228
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 113/229 (49%), Gaps = 27/229 (11%)
Query: 347 FKDKDVIGRGGFGKVYRGVLA---SNVQIAVKKVSHDSKQGIK---EFVAELVSMGRLRH 400
K V+G G FG VY+G+ V+I V + G K EF+ E + M + H
Sbjct: 17 LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDH 76
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHT---NI--KPCLNWYQRFRIIRGVASG 455
+LV+L G C LV MP+G L + +H NI + LNW + +A G
Sbjct: 77 PHLVRLLGVCLSPT-IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ------IAKG 129
Query: 456 LLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTT---KLVGTFG 512
++YL E + ++HRD+ NVL+ + + K+ DFGLARL + D K+
Sbjct: 130 MMYLEE---RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKM--PIK 184
Query: 513 YMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVD 560
+M E + K + +DV+++GV + E+ + G +P + + E +L++
Sbjct: 185 WMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLE 233
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 103/210 (49%), Gaps = 11/210 (5%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKV-SHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCR 411
+G G FGKVY+ +A KV S++ +++++ E+ + H +VKL G
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 412 RKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRD 471
G+ ++ ++ P G++D I+ + L Q + R + L +LH + ++HRD
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIM-LELDRGLTEPQIQVVCRQMLEALNFLH---SKRIIHRD 142
Query: 472 IKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPEL-----MRTGKAST 526
+K NVL+ + + +L DFG++ + T+ + +GT +M PE+ M+
Sbjct: 143 LKAGNVLMTLEGDIRLADFGVSA-KNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDY 201
Query: 527 STDVYAFGVFMLEVASGRRPVEQQGSMETV 556
D+++ G+ ++E+A P + M +
Sbjct: 202 KADIWSLGITLIEMAQIEPPHHELNPMRVL 231
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 101/204 (49%), Gaps = 11/204 (5%)
Query: 347 FKDKDVIGRGGFGKVYRGVLASNVQIAVKKVSH-DSKQGIK-EFVAELVSMGRLRHRNLV 404
F+ +G G G V++ + + +K+ H + K I+ + + EL + +V
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 405 KLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWE 464
G GE + ++M GSLD++L + + I V GL YL E +
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSI--AVIKGLTYLRE--K 123
Query: 465 QVVLHRDIKPANVLLDADLNGKLGDFGLA-RLYDHDTIPQTTKLVGTFGYMDPELMRTGK 523
++HRD+KP+N+L+++ KL DFG++ +L D VGT YM PE ++
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTH 179
Query: 524 ASTSTDVYAFGVFMLEVASGRRPV 547
S +D+++ G+ ++E+A GR P+
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 105/220 (47%), Gaps = 34/220 (15%)
Query: 347 FKDKDVIGRGGFGKVYRGVLASN---VQIAVKKV-SHDSKQGIKEFVAELVSMGRL-RHR 401
K +DVIG G FG+V + + + + A+K++ + SK ++F EL + +L H
Sbjct: 17 IKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHP 76
Query: 402 NLVKLRGYCRRKGEFLLVYDYMPNGSL------DKILHTN--------IKPCLNWYQRFR 447
N++ L G C +G L +Y P+G+L ++L T+ L+ Q
Sbjct: 77 NIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 136
Query: 448 IIRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKL 507
VA G+ YL ++ +HRD+ N+L+ + K+ DFGL+R Q +
Sbjct: 137 FAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSR-------GQEVYV 186
Query: 508 VGTFG-----YMDPELMRTGKASTSTDVYAFGVFMLEVAS 542
T G +M E + +T++DV+++GV + E+ S
Sbjct: 187 KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 103/211 (48%), Gaps = 14/211 (6%)
Query: 353 IGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCR 411
IG+G G VY + +A+ ++A+++++ + + + E++ M ++ N+V
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 412 RKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRD 471
E +V +Y+ GSL ++ + C++ Q + R L +LH + V+HRD
Sbjct: 88 VGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLHSNQ---VIHRD 141
Query: 472 IKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTK---LVGTFGYMDPELMRTGKASTST 528
IK N+LL D + KL DFG + P+ +K +VGT +M PE++
Sbjct: 142 IKSDNILLGMDGSVKLTDFG----FCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKV 197
Query: 529 DVYAFGVFMLEVASGRRPVEQQGSMETVNLV 559
D+++ G+ +E+ G P + + + L+
Sbjct: 198 DIWSLGIMAIEMIEGEPPYLNENPLRALYLI 228
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 100/205 (48%), Gaps = 15/205 (7%)
Query: 352 VIGRGGFGKVYRGV-----LASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKL 406
+G G +G+V V A V+I K + D + IK+ E+ L H N+VK
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EIXINKMLNHENVVKF 69
Query: 407 RGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQV 466
G+ R L +Y G L + +I QRF + +G++YLH
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG---IG 124
Query: 467 VLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQ-TTKLVGTFGYMDPELMRTGK-A 524
+ HRDIKP N+LLD N K+ DFGLA ++ ++ + K+ GT Y+ PEL++ +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 525 STSTDVYAFGVFMLEVASGRRPVEQ 549
+ DV++ G+ + + +G P +Q
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 100/205 (48%), Gaps = 15/205 (7%)
Query: 352 VIGRGGFGKVYRGV-----LASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKL 406
+G G +G+V V A V+I K + D + IK+ E+ L H N+VK
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKF 69
Query: 407 RGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQV 466
G+ R L +Y G L + +I QRF + +G++YLH
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG---IG 124
Query: 467 VLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQ-TTKLVGTFGYMDPELMRTGK-A 524
+ HRDIKP N+LLD N K+ DFGLA ++ ++ + K+ GT Y+ PEL++ +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 525 STSTDVYAFGVFMLEVASGRRPVEQ 549
+ DV++ G+ + + +G P +Q
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 101/204 (49%), Gaps = 11/204 (5%)
Query: 347 FKDKDVIGRGGFGKVYRGVLASNVQIAVKKVSH-DSKQGIK-EFVAELVSMGRLRHRNLV 404
F+ +G G G V++ + + +K+ H + K I+ + + EL + +V
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 405 KLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWE 464
G GE + ++M GSLD++L + + I V GL YL E +
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSI--AVIKGLTYLRE--K 123
Query: 465 QVVLHRDIKPANVLLDADLNGKLGDFGLA-RLYDHDTIPQTTKLVGTFGYMDPELMRTGK 523
++HRD+KP+N+L+++ KL DFG++ +L D VGT YM PE ++
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTH 179
Query: 524 ASTSTDVYAFGVFMLEVASGRRPV 547
S +D+++ G+ ++E+A GR P+
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 101/204 (49%), Gaps = 11/204 (5%)
Query: 347 FKDKDVIGRGGFGKVYRGVLASNVQIAVKKVSH-DSKQGIK-EFVAELVSMGRLRHRNLV 404
F+ +G G G V++ + + +K+ H + K I+ + + EL + +V
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 405 KLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWE 464
G GE + ++M GSLD++L + + I V GL YL E +
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSI--AVIKGLTYLRE--K 123
Query: 465 QVVLHRDIKPANVLLDADLNGKLGDFGLA-RLYDHDTIPQTTKLVGTFGYMDPELMRTGK 523
++HRD+KP+N+L+++ KL DFG++ +L D VGT YM PE ++
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTH 179
Query: 524 ASTSTDVYAFGVFMLEVASGRRPV 547
S +D+++ G+ ++E+A GR P+
Sbjct: 180 YSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 113/229 (49%), Gaps = 27/229 (11%)
Query: 347 FKDKDVIGRGGFGKVYRGVL---ASNVQIAVKKVSHDSKQGIK---EFVAELVSMGRLRH 400
K V+G G FG VY+G+ V+I V + G K EF+ E + M + H
Sbjct: 40 LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDH 99
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHT---NI--KPCLNWYQRFRIIRGVASG 455
+LV+L G C LV MP+G L + +H NI + LNW + +A G
Sbjct: 100 PHLVRLLGVCLSP-TIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ------IAKG 152
Query: 456 LLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTT---KLVGTFG 512
++YL E + ++HRD+ NVL+ + + K+ DFGLARL + D K+
Sbjct: 153 MMYLEE---RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKM--PIK 207
Query: 513 YMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVD 560
+M E + K + +DV+++GV + E+ + G +P + + E +L++
Sbjct: 208 WMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLE 256
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 107/229 (46%), Gaps = 37/229 (16%)
Query: 343 ATKGFKDKDVIGRGGFGKVY------------RGVLASNVQIAVKKVSHDSKQGIKEFVA 390
+ + F+ +G G FG+V+ VL + + +K+V H +
Sbjct: 4 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTND-------- 55
Query: 391 ELVSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIK---PCLNWYQRFR 447
E + + + H ++++ G + + ++ DY+ G L +L + + P +Y
Sbjct: 56 ERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAA-- 113
Query: 448 IIRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTT-K 506
V L YLH + +++RD+KP N+LLD + + K+ DFG A+ +P T
Sbjct: 114 ---EVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKY-----VPDVTYX 162
Query: 507 LVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMET 555
L GT Y+ PE++ T + S D ++FG+ + E+ +G P +M+T
Sbjct: 163 LCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKT 211
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 101/204 (49%), Gaps = 11/204 (5%)
Query: 347 FKDKDVIGRGGFGKVYRGVLASNVQIAVKKVSH-DSKQGIK-EFVAELVSMGRLRHRNLV 404
F+ +G G G V++ + + +K+ H + K I+ + + EL + +V
Sbjct: 35 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 94
Query: 405 KLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWE 464
G GE + ++M GSLD++L + + I V GL YL E +
Sbjct: 95 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSI--AVIKGLTYLREKHK 152
Query: 465 QVVLHRDIKPANVLLDADLNGKLGDFGLA-RLYDHDTIPQTTKLVGTFGYMDPELMRTGK 523
++HRD+KP+N+L+++ KL DFG++ +L D VGT YM PE ++
Sbjct: 153 --IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTH 206
Query: 524 ASTSTDVYAFGVFMLEVASGRRPV 547
S +D+++ G+ ++E+A GR P+
Sbjct: 207 YSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 93/196 (47%), Gaps = 10/196 (5%)
Query: 353 IGRGGFGKVYRGVLA-SNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCR 411
IG G G V + Q+AVKK+ +Q + E+V M H N+V +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 412 RKGEFLLVYDYMPNGSL-DKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHR 470
E +V +++ G+L D + HT +N Q + V L YLH Q V+HR
Sbjct: 113 VGDELWVVMEFLEGGALTDIVTHTR----MNEEQIATVCLSVLRALSYLHN---QGVIHR 165
Query: 471 DIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDV 530
DIK ++LL +D KL DFG + +P+ LVGT +M PE++ T D+
Sbjct: 166 DIKSDSILLTSDGRIKLSDFGFCAQVSKE-VPKRKXLVGTPYWMAPEVISRLPYGTEVDI 224
Query: 531 YAFGVFMLEVASGRRP 546
++ G+ ++E+ G P
Sbjct: 225 WSLGIMVIEMIDGEPP 240
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 103/210 (49%), Gaps = 11/210 (5%)
Query: 353 IGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCR 411
+G G FGKVY+ ++V A K + S++ +++++ E+ + H N+VKL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 412 RKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRD 471
+ ++ ++ G++D ++ +P L Q + + L YLH++ ++HRD
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERP-LTESQIQVVCKQTLDALNYLHDN---KIIHRD 160
Query: 472 IKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKAST----- 526
+K N+L D + KL DFG++ + TI + +GT +M PE++ +
Sbjct: 161 LKAGNILFTLDGDIKLADFGVSA-KNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDY 219
Query: 527 STDVYAFGVFMLEVASGRRPVEQQGSMETV 556
DV++ G+ ++E+A P + M +
Sbjct: 220 KADVWSLGITLIEMAEIEPPHHELNPMRVL 249
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 102/210 (48%), Gaps = 20/210 (9%)
Query: 347 FKDKDVIGRGGFGKVYRG-VLASNVQIAVKKVSHDSKQGIKEFVAELVS-----MGRLRH 400
FK ++G G F V LA++ + A+K + + + IKE V+ M RL H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILH---TNIKPCLNWYQRFRIIRGVASGLL 457
VKL + + Y NG L K + + + C +Y + S L
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFY-----TAEIVSALE 146
Query: 458 YLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTI-PQTTKLVGTFGYMDP 516
YLH + ++HRD+KP N+LL+ D++ ++ DFG A++ ++ + VGT Y+ P
Sbjct: 147 YLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSP 203
Query: 517 ELMRTGKASTSTDVYAFGVFMLEVASGRRP 546
EL+ AS S+D++A G + ++ +G P
Sbjct: 204 ELLTEKSASKSSDLWALGCIIYQLVAGLPP 233
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 103/211 (48%), Gaps = 14/211 (6%)
Query: 353 IGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCR 411
IG+G G VY + +A+ ++A+++++ + + + E++ M ++ N+V
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 412 RKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRD 471
E +V +Y+ GSL ++ + C++ Q + R L +LH + V+HRD
Sbjct: 89 VGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLHSNQ---VIHRD 142
Query: 472 IKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTK---LVGTFGYMDPELMRTGKASTST 528
IK N+LL D + KL DFG + P+ +K +VGT +M PE++
Sbjct: 143 IKSDNILLGMDGSVKLTDFG----FCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKV 198
Query: 529 DVYAFGVFMLEVASGRRPVEQQGSMETVNLV 559
D+++ G+ +E+ G P + + + L+
Sbjct: 199 DIWSLGIMAIEMIEGEPPYLNENPLRALYLI 229
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 100/205 (48%), Gaps = 15/205 (7%)
Query: 352 VIGRGGFGKVYRGV-----LASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKL 406
+G G +G+V V A V+I K + D + IK+ E+ L H N+VK
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKF 69
Query: 407 RGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQV 466
G+ R L +Y G L + +I QRF + +G++YLH
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG---IG 124
Query: 467 VLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQ-TTKLVGTFGYMDPELMRTGK-A 524
+ HRDIKP N+LLD N K+ DFGLA ++ ++ + K+ GT Y+ PEL++ +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 525 STSTDVYAFGVFMLEVASGRRPVEQ 549
+ DV++ G+ + + +G P +Q
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 100/205 (48%), Gaps = 15/205 (7%)
Query: 352 VIGRGGFGKVYRGV-----LASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKL 406
+G G +G+V V A V+I K + D + IK+ E+ L H N+VK
Sbjct: 14 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EIXINKMLNHENVVKF 70
Query: 407 RGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQV 466
G+ R L +Y G L + +I QRF + +G++YLH
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG---IG 125
Query: 467 VLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQ-TTKLVGTFGYMDPELMRTGK-A 524
+ HRDIKP N+LLD N K+ DFGLA ++ ++ + K+ GT Y+ PEL++ +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 185
Query: 525 STSTDVYAFGVFMLEVASGRRPVEQ 549
+ DV++ G+ + + +G P +Q
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 10/209 (4%)
Query: 353 IGRGGFGKV-YRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCR 411
IG G G V V +S +AVKK+ +Q + E+V M +H N+V++
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 412 RKGEFLLVYDYMPNGSL-DKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHR 470
E +V +++ G+L D + HT +N Q + V L LH Q V+HR
Sbjct: 97 VGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHA---QGVIHR 149
Query: 471 DIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDV 530
DIK ++LL D KL DFG + +P+ LVGT +M PEL+ D+
Sbjct: 150 DIKSDSILLTHDGRVKLSDFGFCAQVSKE-VPRRKXLVGTPYWMAPELISRLPYGPEVDI 208
Query: 531 YAFGVFMLEVASGRRPVEQQGSMETVNLV 559
++ G+ ++E+ G P + ++ + ++
Sbjct: 209 WSLGIMVIEMVDGEPPYFNEPPLKAMKMI 237
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 10/209 (4%)
Query: 353 IGRGGFGKV-YRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCR 411
IG G G V V +S +AVKK+ +Q + E+V M +H N+V++
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 412 RKGEFLLVYDYMPNGSL-DKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHR 470
E +V +++ G+L D + HT +N Q + V L LH Q V+HR
Sbjct: 88 VGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHA---QGVIHR 140
Query: 471 DIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDV 530
DIK ++LL D KL DFG + +P+ LVGT +M PEL+ D+
Sbjct: 141 DIKSDSILLTHDGRVKLSDFGFCAQVSKE-VPRRKXLVGTPYWMAPELISRLPYGPEVDI 199
Query: 531 YAFGVFMLEVASGRRPVEQQGSMETVNLV 559
++ G+ ++E+ G P + ++ + ++
Sbjct: 200 WSLGIMVIEMVDGEPPYFNEPPLKAMKMI 228
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 110/211 (52%), Gaps = 23/211 (10%)
Query: 347 FKDKDVIGRGGFGKVYRGVLASNV----QIAVKKVSH---DSKQGIKEFVAELVSMGRLR 399
+K + V+G+G FG+V +L + + AVK +S K + + E+ + +L
Sbjct: 28 YKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 400 HRNLVKLRGYCRRKGEFLLVYDYMPNGSL-DKILHTNIKPCLNWYQRFRIIRGVASGLLY 458
H N++KL + KG F LV + G L D+I+ + + RIIR V SG+ Y
Sbjct: 85 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIIS---RKRFSEVDAARIIRQVLSGITY 141
Query: 459 LHEDWEQVVLHRDIKPANVLLDA---DLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMD 515
+H++ ++HRD+KP N+LL++ D N ++ DFGL+ + + + +GT Y+
Sbjct: 142 MHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF--EASKKMKDKIGTAYYIA 196
Query: 516 PELMRTGKASTSTDVYAFGVFMLEVASGRRP 546
PE++ G DV++ GV + + SG P
Sbjct: 197 PEVLH-GTYDEKCDVWSTGVILYILLSGCPP 226
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 131/285 (45%), Gaps = 37/285 (12%)
Query: 350 KDVIGRGGFGKVYRGVLASNVQ-IAVKKVSHDSKQ-GIKEFVAELVSMGRLRHRNLVKLR 407
++VIG G V A + +A+K+++ + Q + E + E+ +M + H N+V
Sbjct: 20 QEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYY 79
Query: 408 GYCRRKGEFLLVYDYMPNGS-LDKILHTNIKP-----CLNWYQRFRIIRGVASGLLYLHE 461
K E LV + GS LD I H K L+ I+R V GL YLH+
Sbjct: 80 TSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK 139
Query: 462 DWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLY------DHDTIPQTTKLVGTFGYMD 515
+ + +HRD+K N+LL D + ++ DFG++ + + +T VGT +M
Sbjct: 140 NGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKT--FVGTPCWMA 194
Query: 516 PELMRTGKA-STSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWVCDCWKKGAIRDA 574
PE+M + D+++FG+ +E+A+G P + M+ + L +++
Sbjct: 195 PEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLT-----------LQND 243
Query: 575 SDSRLEGICEEKQM-----ELVLKLGLFCSHPKPEARPNMRQVMQ 614
S LE ++K+M + K+ C PE RP ++++
Sbjct: 244 PPS-LETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 105/220 (47%), Gaps = 34/220 (15%)
Query: 347 FKDKDVIGRGGFGKVYRGVLASN---VQIAVKKV-SHDSKQGIKEFVAELVSMGRL-RHR 401
K +DVIG G FG+V + + + + A+K++ + SK ++F EL + +L H
Sbjct: 27 IKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHP 86
Query: 402 NLVKLRGYCRRKGEFLLVYDYMPNGSL------DKILHTN--------IKPCLNWYQRFR 447
N++ L G C +G L +Y P+G+L ++L T+ L+ Q
Sbjct: 87 NIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 146
Query: 448 IIRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKL 507
VA G+ YL ++ +HRD+ N+L+ + K+ DFGL+R Q +
Sbjct: 147 FAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSR-------GQEVYV 196
Query: 508 VGTFG-----YMDPELMRTGKASTSTDVYAFGVFMLEVAS 542
T G +M E + +T++DV+++GV + E+ S
Sbjct: 197 KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 125/277 (45%), Gaps = 34/277 (12%)
Query: 353 IGRGGFGKVYRGVL------ASNVQIAVKKVSHDSKQGIK-EFVAELVSMGRLRHRNLVK 405
+G+G FG VY G + ++AVK V+ + + EF+ E M ++V+
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 406 LRGYCRRKGEFLLVYDYMPNGSLDKILHT--------NIKPCLNWYQRFRIIRGVASGLL 457
L G + L+V + M +G L L + +P + ++ +A G+
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 458 YLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDHDTIPQTTKLVGTFGYMDP 516
YL+ + +HRD+ N ++ D K+GDFG+ R +Y+ D + K + +M P
Sbjct: 144 YLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 200
Query: 517 ELMRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASD 576
E ++ G +TS+D+++FGV + E+ S Q S E V + +V D G D D
Sbjct: 201 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQV--LKFVMD----GGYLDQPD 254
Query: 577 SRLEGICEEKQMELVLKLGLFCSHPKPEARPNMRQVM 613
+ C E+ V L C P+ RP +++
Sbjct: 255 N-----CPER----VTDLMRMCWQFNPKMRPTFLEIV 282
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 12/207 (5%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKV---SHDSKQGIK-EFVAELVSMGRLRHRNLVKLRG 408
+G+G FG VY N I KV S K+G++ + E+ LRH N++++
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 409 YCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVL 468
Y + L+ ++ P G L K L + + + + + +A L Y HE + V+
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGR--FDEQRSATFMEELADALHYCHE---RKVI 136
Query: 469 HRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTST 528
HRDIKP N+L+ K+ DFG + H + + GT Y+ PE++
Sbjct: 137 HRDIKPENLLMGYKGELKIADFGWS---VHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKV 193
Query: 529 DVYAFGVFMLEVASGRRPVEQQGSMET 555
D++ GV E G P + ET
Sbjct: 194 DLWCAGVLCYEFLVGMPPFDSPSHTET 220
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 10/209 (4%)
Query: 353 IGRGGFGKV-YRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCR 411
IG G G V V +S +AVKK+ +Q + E+V M +H N+V++
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 412 RKGEFLLVYDYMPNGSL-DKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHR 470
E +V +++ G+L D + HT +N Q + V L LH Q V+HR
Sbjct: 92 VGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHA---QGVIHR 144
Query: 471 DIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDV 530
DIK ++LL D KL DFG + +P+ LVGT +M PEL+ D+
Sbjct: 145 DIKSDSILLTHDGRVKLSDFGFCAQVSKE-VPRRKXLVGTPYWMAPELISRLPYGPEVDI 203
Query: 531 YAFGVFMLEVASGRRPVEQQGSMETVNLV 559
++ G+ ++E+ G P + ++ + ++
Sbjct: 204 WSLGIMVIEMVDGEPPYFNEPPLKAMKMI 232
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 133/288 (46%), Gaps = 37/288 (12%)
Query: 347 FKDKDVIGRGGFGKVYRGVLASNVQ-IAVKKVSHDSKQ-GIKEFVAELVSMGRLRHRNLV 404
++ ++VIG G V A + +A+K+++ + Q + E + E+ +M + H N+V
Sbjct: 12 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIV 71
Query: 405 KLRGYCRRKGEFLLVYDYMPNGS-LDKILHTNIKP-----CLNWYQRFRIIRGVASGLLY 458
K E LV + GS LD I H K L+ I+R V GL Y
Sbjct: 72 SYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEY 131
Query: 459 LHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLY------DHDTIPQTTKLVGTFG 512
LH++ + +HRD+K N+LL D + ++ DFG++ + + +T VGT
Sbjct: 132 LHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKT--FVGTPC 186
Query: 513 YMDPELMRTGKA-STSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWVCDCWKKGAI 571
+M PE+M + D+++FG+ +E+A+G P + M+ + L +
Sbjct: 187 WMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLT-----------L 235
Query: 572 RDASDSRLEGICEEKQM-----ELVLKLGLFCSHPKPEARPNMRQVMQ 614
++ S LE ++K+M + K+ C PE RP ++++
Sbjct: 236 QNDPPS-LETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 282
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 110/211 (52%), Gaps = 23/211 (10%)
Query: 347 FKDKDVIGRGGFGKVYRGVLASN----VQIAVKKVSH---DSKQGIKEFVAELVSMGRLR 399
+K + V+G+G FG+V +L + + AVK +S K + + E+ + +L
Sbjct: 51 YKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 107
Query: 400 HRNLVKLRGYCRRKGEFLLVYDYMPNGSL-DKILHTNIKPCLNWYQRFRIIRGVASGLLY 458
H N++KL + KG F LV + G L D+I+ + + RIIR V SG+ Y
Sbjct: 108 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIIS---RKRFSEVDAARIIRQVLSGITY 164
Query: 459 LHEDWEQVVLHRDIKPANVLLDA---DLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMD 515
+H++ ++HRD+KP N+LL++ D N ++ DFGL+ + + + +GT Y+
Sbjct: 165 MHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF--EASKKMKDKIGTAYYIA 219
Query: 516 PELMRTGKASTSTDVYAFGVFMLEVASGRRP 546
PE++ G DV++ GV + + SG P
Sbjct: 220 PEVLH-GTYDEKCDVWSTGVILYILLSGCPP 249
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 100/205 (48%), Gaps = 15/205 (7%)
Query: 352 VIGRGGFGKVYRGV-----LASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKL 406
+G G +G+V V A V+I K + D + IK+ E+ L H N+VK
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EIXINKMLNHENVVKF 69
Query: 407 RGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQV 466
G+ R L +Y G L + +I QRF + +G++YLH
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG---IG 124
Query: 467 VLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQ-TTKLVGTFGYMDPELMRTGK-A 524
+ HRDIKP N+LLD N K+ DFGLA ++ ++ + K+ GT Y+ PEL++ +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 525 STSTDVYAFGVFMLEVASGRRPVEQ 549
+ DV++ G+ + + +G P +Q
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 10/209 (4%)
Query: 353 IGRGGFGKV-YRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCR 411
IG G G V V +S +AVKK+ +Q + E+V M +H N+V++
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 412 RKGEFLLVYDYMPNGSL-DKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHR 470
E +V +++ G+L D + HT +N Q + V L LH Q V+HR
Sbjct: 99 VGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHA---QGVIHR 151
Query: 471 DIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDV 530
DIK ++LL D KL DFG + +P+ LVGT +M PEL+ D+
Sbjct: 152 DIKSDSILLTHDGRVKLSDFGFCAQVSKE-VPRRKXLVGTPYWMAPELISRLPYGPEVDI 210
Query: 531 YAFGVFMLEVASGRRPVEQQGSMETVNLV 559
++ G+ ++E+ G P + ++ + ++
Sbjct: 211 WSLGIMVIEMVDGEPPYFNEPPLKAMKMI 239
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 12/207 (5%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKV---SHDSKQGIK-EFVAELVSMGRLRHRNLVKLRG 408
+G+G FG VY N I KV S K+G++ + E+ LRH N++++
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 409 YCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVL 468
Y + L+ ++ P G L K L + + + + + +A L Y HE + V+
Sbjct: 83 YFHDRKRIYLMLEFAPRGELYKELQKHGR--FDEQRSATFMEELADALHYCHE---RKVI 137
Query: 469 HRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTST 528
HRDIKP N+L+ K+ DFG + H + + GT Y+ PE++
Sbjct: 138 HRDIKPENLLMGYKGELKIADFGWS---VHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKV 194
Query: 529 DVYAFGVFMLEVASGRRPVEQQGSMET 555
D++ GV E G P + ET
Sbjct: 195 DLWCAGVLCYEFLVGMPPFDSPSHTET 221
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 103/213 (48%), Gaps = 11/213 (5%)
Query: 351 DVIGR-GGFGKVYRGV-LASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRG 408
++IG G FGKVY+ ++V A K + S++ +++++ E+ + H N+VKL
Sbjct: 15 EIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLD 74
Query: 409 YCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVL 468
+ ++ ++ G++D ++ +P L Q + + L YLH++ ++
Sbjct: 75 AFYYENNLWILIEFCAGGAVDAVMLELERP-LTESQIQVVCKQTLDALNYLHDN---KII 130
Query: 469 HRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKAST-- 526
HRD+K N+L D + KL DFG++ I + +GT +M PE++ +
Sbjct: 131 HRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRP 190
Query: 527 ---STDVYAFGVFMLEVASGRRPVEQQGSMETV 556
DV++ G+ ++E+A P + M +
Sbjct: 191 YDYKADVWSLGITLIEMAEIEPPHHELNPMRVL 223
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 110/211 (52%), Gaps = 23/211 (10%)
Query: 347 FKDKDVIGRGGFGKVYRGVLASN----VQIAVKKVSH---DSKQGIKEFVAELVSMGRLR 399
+K + V+G+G FG+V +L + + AVK +S K + + E+ + +L
Sbjct: 52 YKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 108
Query: 400 HRNLVKLRGYCRRKGEFLLVYDYMPNGSL-DKILHTNIKPCLNWYQRFRIIRGVASGLLY 458
H N++KL + KG F LV + G L D+I+ + + RIIR V SG+ Y
Sbjct: 109 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIIS---RKRFSEVDAARIIRQVLSGITY 165
Query: 459 LHEDWEQVVLHRDIKPANVLLDA---DLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMD 515
+H++ ++HRD+KP N+LL++ D N ++ DFGL+ + + + +GT Y+
Sbjct: 166 MHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF--EASKKMKDKIGTAYYIA 220
Query: 516 PELMRTGKASTSTDVYAFGVFMLEVASGRRP 546
PE++ G DV++ GV + + SG P
Sbjct: 221 PEVLH-GTYDEKCDVWSTGVILYILLSGCPP 250
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 12/207 (5%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKV---SHDSKQGIK-EFVAELVSMGRLRHRNLVKLRG 408
+G+G FG VY N I KV S K+G++ + E+ LRH N++++
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 409 YCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVL 468
Y + L+ ++ P G L K L + + + + + +A L Y HE + V+
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGR--FDEQRSATFMEELADALHYCHE---RKVI 136
Query: 469 HRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTST 528
HRDIKP N+L+ K+ DFG + H + + GT Y+ PE++
Sbjct: 137 HRDIKPENLLMGYKGELKIADFGWS---VHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKV 193
Query: 529 DVYAFGVFMLEVASGRRPVEQQGSMET 555
D++ GV E G P + ET
Sbjct: 194 DLWCAGVLCYEFLVGMPPFDSPSHTET 220
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 107/220 (48%), Gaps = 17/220 (7%)
Query: 351 DVIGRGGFGKVYRGVLA-SNVQIAVKKVSHDSKQG---IKEFVAELVSMGRLRHRNLVKL 406
D +G G FGKV G + ++AVK ++ + + + E+ ++ RH +++KL
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81
Query: 407 RGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQV 466
+ +V +Y+ G L + N + L+ + R+ + + SG+ Y H +
Sbjct: 82 YQVISTPSDIFMVMEYVSGGELFDYICKNGR--LDEKESRRLFQQILSGVDYCHR---HM 136
Query: 467 VLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGK--A 524
V+HRD+KP NVLLDA +N K+ DFGL+ + + + G+ Y PE++ +G+ A
Sbjct: 137 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXS--CGSPNYAAPEVI-SGRLYA 193
Query: 525 STSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWVCD 564
D+++ GV + + G P + L +CD
Sbjct: 194 GPEVDIWSSGVILYALLCGTLPFDDD---HVPTLFKKICD 230
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 97/217 (44%), Gaps = 18/217 (8%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKV---SHDSKQGIK-EFVAELVSMGRLRHRNLVKLRG 408
+G+G FG VY + I KV + K G++ + E+ LRH N+++L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 409 YCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRI---IRGVASGLLYLHEDWEQ 465
Y L+ +Y P G++ + L L+ + R I +A+ L Y H +
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQK-----LSRFDEQRTATYITELANALSYCHS---K 131
Query: 466 VVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKAS 525
V+HRDIKP N+LL ++ K+ DFG + H + L GT Y+ PE++
Sbjct: 132 RVIHRDIKPENLLLGSNGELKIADFGWS---VHAPSSRRDTLCGTLDYLPPEMIEGRMHD 188
Query: 526 TSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWV 562
D+++ GV E G P E ET + V
Sbjct: 189 EKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRV 225
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 130/279 (46%), Gaps = 38/279 (13%)
Query: 353 IGRGGFGKVYRGVLASNVQ------IAVKKVSHDSKQGIK-EFVAELVSMGRLRHRNLVK 405
+G+G FG VY GV V+ +A+K V+ + + EF+ E M ++V+
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 406 LRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCL---------NWYQRFRIIRGVASGL 456
L G + L++ + M G L L + ++P + + + ++ +A G+
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRS-LRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 457 LYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDHDTIPQTTKLVGTFGYMD 515
YL+ + +HRD+ N ++ D K+GDFG+ R + + D + K + +M
Sbjct: 146 AYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMS 202
Query: 516 PELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCDCWKKGAIRDA 574
PE ++ G +T +DV++FGV + E+A+ +P + + + + V +G + D
Sbjct: 203 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV-------MEGGLLDK 255
Query: 575 SDSRLEGICEEKQMELVLKLGLFCSHPKPEARPNMRQVM 613
D+ C +++ +L C P+ RP+ +++
Sbjct: 256 PDN-----CP----DMLFELMRMCWQYNPKMRPSFLEII 285
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 10/209 (4%)
Query: 353 IGRGGFGKV-YRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCR 411
IG G G V V +S +AVKK+ +Q + E+V M +H N+V++
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 412 RKGEFLLVYDYMPNGSL-DKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHR 470
E +V +++ G+L D + HT +N Q + V L LH Q V+HR
Sbjct: 219 VGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHA---QGVIHR 271
Query: 471 DIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDV 530
DIK ++LL D KL DFG + +P+ LVGT +M PEL+ D+
Sbjct: 272 DIKSDSILLTHDGRVKLSDFGFCAQVSKE-VPRRKXLVGTPYWMAPELISRLPYGPEVDI 330
Query: 531 YAFGVFMLEVASGRRPVEQQGSMETVNLV 559
++ G+ ++E+ G P + ++ + ++
Sbjct: 331 WSLGIMVIEMVDGEPPYFNEPPLKAMKMI 359
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 94/208 (45%), Gaps = 14/208 (6%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKV---SHDSKQGIK-EFVAELVSMGRLRHRNLVKLRG 408
+G+G FG VY + I KV S K+G++ + E+ L H N+++L
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYN 90
Query: 409 YCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRF-RIIRGVASGLLYLHEDWEQVV 467
Y + L+ +Y P G L K L K C QR I+ +A L+Y H + V
Sbjct: 91 YFYDRRRIYLILEYAPRGELYKELQ---KSCTFDEQRTATIMEELADALMYCHG---KKV 144
Query: 468 LHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTS 527
+HRDIKP N+LL K+ DFG + H + + GT Y+ PE++ +
Sbjct: 145 IHRDIKPENLLLGLKGELKIADFGWS---VHAPSLRRKTMCGTLDYLPPEMIEGRMHNEK 201
Query: 528 TDVYAFGVFMLEVASGRRPVEQQGSMET 555
D++ GV E+ G P E ET
Sbjct: 202 VDLWCIGVLCYELLVGNPPFESASHNET 229
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 104/211 (49%), Gaps = 22/211 (10%)
Query: 347 FKDKDVIGRGGFGKVYRG-VLASNVQIAVKKVSHDSKQGIKEFVAELVS-----MGRLRH 400
FK ++G G F V LA++ + A+K + + + IKE V+ M RL H
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 401 RNLVKLRGYCRRKGEFLLV-YDYMPNGSLDKILH---TNIKPCLNWYQRFRIIRGVASGL 456
VKL +C + E L Y NG L K + + + C +Y + S L
Sbjct: 97 PFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-----TAEIVSAL 150
Query: 457 LYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTI-PQTTKLVGTFGYMD 515
YLH + ++HRD+KP N+LL+ D++ ++ DFG A++ ++ + VGT Y+
Sbjct: 151 EYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 207
Query: 516 PELMRTGKASTSTDVYAFGVFMLEVASGRRP 546
PEL+ A S+D++A G + ++ +G P
Sbjct: 208 PELLTEKSACKSSDLWALGCIIYQLVAGLPP 238
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 110/218 (50%), Gaps = 20/218 (9%)
Query: 352 VIGRGGFGKVY--RGVLASNV-QIAVKKVSHDSKQGIKEFV---AELVSMGRLRHRNLVK 405
V+G+G FGKV+ R V + + KV + +++ V E + + H +VK
Sbjct: 35 VLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVK 94
Query: 406 LRGYCRRKGEFLLVYDYMPNGSLDKILHTNI---KPCLNWYQRFRIIRGVASGLLYLHED 462
L + +G+ L+ D++ G L L + + + +Y + +A GL +LH
Sbjct: 95 LHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFY-----LAELALGLDHLHS- 148
Query: 463 WEQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDHDTIPQTTKLVGTFGYMDPELMRT 521
+++RD+KP N+LLD + + KL DFGL++ DH+ + GT YM PE++
Sbjct: 149 --LGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEK--KAYSFCGTVEYMAPEVVNR 204
Query: 522 GKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLV 559
S S D +++GV M E+ +G P + + ET+ L+
Sbjct: 205 QGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLI 242
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 98/207 (47%), Gaps = 10/207 (4%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDS---KQGIKEFVAELVSMGR-LRHRNLVKLRG 408
+G+GGF K + A ++ K+ S K +E ++ +S+ R L H+++V G
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 409 YCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVL 468
+ +V + SL + LH K R+ +R + G YLH + V+
Sbjct: 83 FFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARY-YLRQIVLGCQYLHRNR---VI 137
Query: 469 HRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTST 528
HRD+K N+ L+ DL K+GDFGLA ++D + L GT Y+ PE++ S
Sbjct: 138 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG-ERKKVLCGTPNYIAPEVLSKKGHSFEV 196
Query: 529 DVYAFGVFMLEVASGRRPVEQQGSMET 555
DV++ G M + G+ P E ET
Sbjct: 197 DVWSIGCIMYTLLVGKPPFETSCLKET 223
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 20/215 (9%)
Query: 342 KATKGFKDKDVIGRGGFGKVYRG-VLASNVQIAVKKVSHDSKQGIKEFVAELVS-----M 395
K + FK ++G G F V LA++ + A+K + + + IKE V+ M
Sbjct: 5 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVM 62
Query: 396 GRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILH---TNIKPCLNWYQRFRIIRGV 452
RL H VKL + + Y NG L K + + + C +Y +
Sbjct: 63 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-----TAEI 117
Query: 453 ASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTI-PQTTKLVGTF 511
S L YLH + ++HRD+KP N+LL+ D++ ++ DFG A++ ++ + VGT
Sbjct: 118 VSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 174
Query: 512 GYMDPELMRTGKASTSTDVYAFGVFMLEVASGRRP 546
Y+ PEL+ A S+D++A G + ++ +G P
Sbjct: 175 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 209
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 98/207 (47%), Gaps = 10/207 (4%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDS---KQGIKEFVAELVSMGR-LRHRNLVKLRG 408
+G+GGF K + A ++ K+ S K +E ++ +S+ R L H+++V G
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 409 YCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVL 468
+ +V + SL + LH K R+ +R + G YLH + V+
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARY-YLRQIVLGCQYLHRNR---VI 161
Query: 469 HRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTST 528
HRD+K N+ L+ DL K+GDFGLA ++D + L GT Y+ PE++ S
Sbjct: 162 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG-ERKKVLCGTPNYIAPEVLSKKGHSFEV 220
Query: 529 DVYAFGVFMLEVASGRRPVEQQGSMET 555
DV++ G M + G+ P E ET
Sbjct: 221 DVWSIGCIMYTLLVGKPPFETSCLKET 247
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 20/215 (9%)
Query: 342 KATKGFKDKDVIGRGGFGKVYRG-VLASNVQIAVKKVSHDSKQGIKEFVAELVS-----M 395
K + FK ++G G F V LA++ + A+K + + + IKE V+ M
Sbjct: 6 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVM 63
Query: 396 GRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILH---TNIKPCLNWYQRFRIIRGV 452
RL H VKL + + Y NG L K + + + C +Y +
Sbjct: 64 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-----TAEI 118
Query: 453 ASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTI-PQTTKLVGTF 511
S L YLH + ++HRD+KP N+LL+ D++ ++ DFG A++ ++ + VGT
Sbjct: 119 VSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 175
Query: 512 GYMDPELMRTGKASTSTDVYAFGVFMLEVASGRRP 546
Y+ PEL+ A S+D++A G + ++ +G P
Sbjct: 176 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 210
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 10/209 (4%)
Query: 353 IGRGGFGKV-YRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCR 411
IG G G V V +S +AVKK+ +Q + E+V M +H N+V++
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 412 RKGEFLLVYDYMPNGSL-DKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHR 470
E +V +++ G+L D + HT +N Q + V L LH Q V+HR
Sbjct: 142 VGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHA---QGVIHR 194
Query: 471 DIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDV 530
DIK ++LL D KL DFG + +P+ LVGT +M PEL+ D+
Sbjct: 195 DIKSDSILLTHDGRVKLSDFGFCAQVSKE-VPRRKXLVGTPYWMAPELISRLPYGPEVDI 253
Query: 531 YAFGVFMLEVASGRRPVEQQGSMETVNLV 559
++ G+ ++E+ G P + ++ + ++
Sbjct: 254 WSLGIMVIEMVDGEPPYFNEPPLKAMKMI 282
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 105/216 (48%), Gaps = 8/216 (3%)
Query: 345 KGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNL 403
K + + IG+G G VY + +A+ ++A+++++ + + + E++ M ++ N+
Sbjct: 21 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI 80
Query: 404 VKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDW 463
V E +V +Y+ GSL ++ + C++ Q + R L +LH +
Sbjct: 81 VNYLDSYLVGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLHSNQ 137
Query: 464 EQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGK 523
V+HR+IK N+LL D + KL DFG + ++T +VGT +M PE++
Sbjct: 138 ---VIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST-MVGTPYWMAPEVVTRKA 193
Query: 524 ASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLV 559
D+++ G+ +E+ G P + + + L+
Sbjct: 194 YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI 229
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 20/215 (9%)
Query: 342 KATKGFKDKDVIGRGGFGKVYRG-VLASNVQIAVKKVSHDSKQGIKEFVAELVS-----M 395
K + FK ++G G F V LA++ + A+K + + + IKE V+ M
Sbjct: 7 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVM 64
Query: 396 GRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILH---TNIKPCLNWYQRFRIIRGV 452
RL H VKL + + Y NG L K + + + C +Y +
Sbjct: 65 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-----TAEI 119
Query: 453 ASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTI-PQTTKLVGTF 511
S L YLH + ++HRD+KP N+LL+ D++ ++ DFG A++ ++ + VGT
Sbjct: 120 VSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 176
Query: 512 GYMDPELMRTGKASTSTDVYAFGVFMLEVASGRRP 546
Y+ PEL+ A S+D++A G + ++ +G P
Sbjct: 177 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 211
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 105/202 (51%), Gaps = 16/202 (7%)
Query: 352 VIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQG--IKEFVAELVSMGRLRHRNLVKLRG 408
++G+G FG+V + + + AVK ++ S + + E+ + +L H N++KL
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 409 YCRRKGEFLLVYDYMPNGSL-DKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVV 467
F +V + G L D+I+ + + + RII+ V SG+ Y+H+ +
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIK---RKRFSEHDAARIIKQVFSGITYMHK---HNI 142
Query: 468 LHRDIKPANVLLDA---DLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKA 524
+HRD+KP N+LL++ D + K+ DFGL+ + +T + +GT Y+ PE++R G
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT--KMKDRIGTAYYIAPEVLR-GTY 199
Query: 525 STSTDVYAFGVFMLEVASGRRP 546
DV++ GV + + SG P
Sbjct: 200 DEKCDVWSAGVILYILLSGTPP 221
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 20/215 (9%)
Query: 342 KATKGFKDKDVIGRGGFGKVYRG-VLASNVQIAVKKVSHDSKQGIKEFVAELVS-----M 395
K + FK ++G G F V LA++ + A+K + + + IKE V+ M
Sbjct: 4 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVM 61
Query: 396 GRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILH---TNIKPCLNWYQRFRIIRGV 452
RL H VKL + + Y NG L K + + + C +Y +
Sbjct: 62 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-----TAEI 116
Query: 453 ASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTI-PQTTKLVGTF 511
S L YLH + ++HRD+KP N+LL+ D++ ++ DFG A++ ++ + VGT
Sbjct: 117 VSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 173
Query: 512 GYMDPELMRTGKASTSTDVYAFGVFMLEVASGRRP 546
Y+ PEL+ A S+D++A G + ++ +G P
Sbjct: 174 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 208
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 98/207 (47%), Gaps = 10/207 (4%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDS---KQGIKEFVAELVSMGR-LRHRNLVKLRG 408
+G+GGF K + A ++ K+ S K +E ++ +S+ R L H+++V G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 409 YCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVL 468
+ +V + SL + LH K R+ +R + G YLH + V+
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARY-YLRQIVLGCQYLHRNR---VI 163
Query: 469 HRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTST 528
HRD+K N+ L+ DL K+GDFGLA ++D + L GT Y+ PE++ S
Sbjct: 164 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG-ERKKVLCGTPNYIAPEVLSKKGHSFEV 222
Query: 529 DVYAFGVFMLEVASGRRPVEQQGSMET 555
DV++ G M + G+ P E ET
Sbjct: 223 DVWSIGCIMYTLLVGKPPFETSCLKET 249
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 120/270 (44%), Gaps = 25/270 (9%)
Query: 347 FKDKDVIGRGGFGKVYRGVLASNVQIAVKKVS--HDSKQGIKEFVAELVSMGRLRHRNLV 404
F D IG+G FG+VY+G+ ++ K+ +++ I++ E+ + + +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 405 KLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWE 464
+ G + + ++ +Y+ GS +L P Y I+R + GL YLH + +
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLLKPG--PLEETYIA-TILREILKGLDYLHSERK 137
Query: 465 QVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKA 524
+HRDIK ANVLL + KL DFG+A DT + VGT +M PE+++
Sbjct: 138 ---IHRDIKAANVLLSEQGDVKLADFGVAGQLT-DTQIKRNXFVGTPFWMAPEVIKQSAY 193
Query: 525 STSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASDSRLEGICE 584
D+++ G+ +E+A G P M + L I S LEG
Sbjct: 194 DFKADIWSLGITAIELAKGEPPNSDLHPMRVLFL------------IPKNSPPTLEGQHS 241
Query: 585 EKQMELVLKLGLFCSHPKPEARPNMRQVMQ 614
+ E V C + P RP +++++
Sbjct: 242 KPFKEFVEA----CLNKDPRFRPTAKELLK 267
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 107/227 (47%), Gaps = 20/227 (8%)
Query: 347 FKDKDVIGRGGFGKVYRGVLASNVQIAVKKV---SHDSKQGIKEFVAELVSMGRLRHRNL 403
F+ +++G G +G+VY+G Q+A KV + D ++ IK+ + L HRN+
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSH--HRNI 83
Query: 404 VKLRGYCRRKG------EFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLL 457
G +K + LV ++ GS+ ++ L I R + GL
Sbjct: 84 ATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLS 143
Query: 458 YLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPE 517
+LH+ V+HRDIK NVLL + KL DFG++ D T+ + +GT +M PE
Sbjct: 144 HLHQ---HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDR-TVGRRNTFIGTPYWMAPE 199
Query: 518 LMRTGKASTST-----DVYAFGVFMLEVASGRRPVEQQGSMETVNLV 559
++ + +T D+++ G+ +E+A G P+ M + L+
Sbjct: 200 VIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI 246
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 111/218 (50%), Gaps = 20/218 (9%)
Query: 352 VIGRGGFGKVY--RGVLASNV-QIAVKKVSHDSKQGIKEFV---AELVSMGRLRHRNLVK 405
V+G+G FGKV+ + + S+ Q+ KV + +++ V E + + H +VK
Sbjct: 31 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVK 90
Query: 406 LRGYCRRKGEFLLVYDYMPNGSLDKILHTNI---KPCLNWYQRFRIIRGVASGLLYLHED 462
L + +G+ L+ D++ G L L + + + +Y + +A L +LH
Sbjct: 91 LHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFY-----LAELALALDHLHS- 144
Query: 463 WEQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDHDTIPQTTKLVGTFGYMDPELMRT 521
+++RD+KP N+LLD + + KL DFGL++ DH+ + GT YM PE++
Sbjct: 145 --LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK--KAYSFCGTVEYMAPEVVNR 200
Query: 522 GKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLV 559
+ S D ++FGV M E+ +G P + + ET+ ++
Sbjct: 201 RGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMI 238
>pdb|1WBL|A Chain A, Winged Bean Lectin Complexed With Methyl-Alpha-D-Galactose
pdb|1WBL|B Chain B, Winged Bean Lectin Complexed With Methyl-Alpha-D-Galactose
pdb|1WBL|C Chain C, Winged Bean Lectin Complexed With Methyl-Alpha-D-Galactose
pdb|1WBL|D Chain D, Winged Bean Lectin Complexed With Methyl-Alpha-D-Galactose
pdb|2DTW|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With 2me-O-D- Galactose
pdb|2DTW|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With 2me-O-D- Galactose
pdb|2DTW|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With 2me-O-D- Galactose
pdb|2DTW|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With 2me-O-D- Galactose
pdb|2DTY|A Chain A, Crystal Structure Of Basic Winged Bean Lectin Complexed
With N-Acetyl- D-Galactosamine
pdb|2DTY|B Chain B, Crystal Structure Of Basic Winged Bean Lectin Complexed
With N-Acetyl- D-Galactosamine
pdb|2DTY|C Chain C, Crystal Structure Of Basic Winged Bean Lectin Complexed
With N-Acetyl- D-Galactosamine
pdb|2DTY|D Chain D, Crystal Structure Of Basic Winged Bean Lectin Complexed
With N-Acetyl- D-Galactosamine
pdb|2DU0|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Alpha-D- Galactose
pdb|2DU0|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Alpha-D- Galactose
pdb|2DU0|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Alpha-D- Galactose
pdb|2DU0|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Alpha-D- Galactose
pdb|2DU1|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Methyl- Alpha-N-Acetyl-D Galactosamine
pdb|2DU1|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Methyl- Alpha-N-Acetyl-D Galactosamine
pdb|2DU1|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Methyl- Alpha-N-Acetyl-D Galactosamine
pdb|2DU1|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Methyl- Alpha-N-Acetyl-D Galactosamine
pdb|2E51|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Disaccharide
pdb|2E51|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Disaccharide
pdb|2E51|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Disaccharide
pdb|2E51|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Disaccharide
pdb|2E53|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Disaccharide
pdb|2E53|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Disaccharide
pdb|2E53|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Disaccharide
pdb|2E53|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Disaccharide
pdb|2ZMK|A Chain A, Crystl Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha-1,4-gal-beta-ethylene
pdb|2ZMK|B Chain B, Crystl Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha-1,4-gal-beta-ethylene
pdb|2ZMK|C Chain C, Crystl Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha-1,4-gal-beta-ethylene
pdb|2ZMK|D Chain D, Crystl Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha-1,4-gal-beta-ethylene
pdb|2ZML|A Chain A, Crystal Stucture Of Basic Winged Bean Lectin In Complex
With Gal-Alpha 1,4 Gal
pdb|2ZML|B Chain B, Crystal Stucture Of Basic Winged Bean Lectin In Complex
With Gal-Alpha 1,4 Gal
pdb|2ZML|C Chain C, Crystal Stucture Of Basic Winged Bean Lectin In Complex
With Gal-Alpha 1,4 Gal
pdb|2ZML|D Chain D, Crystal Stucture Of Basic Winged Bean Lectin In Complex
With Gal-Alpha 1,4 Gal
pdb|2ZMN|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha- 1,6 Glc
pdb|2ZMN|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha- 1,6 Glc
pdb|2ZMN|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha- 1,6 Glc
pdb|2ZMN|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha- 1,6 Glc
Length = 241
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 123/267 (46%), Gaps = 53/267 (19%)
Query: 22 ALAQDVNQFIYHGFNEDAQLQRDGLASVHSNGLLQLTNTVSP----QQEGHAFYRLPIK- 76
++ + NQF H E +LQRD A + SN +L+LT V+ G A Y P++
Sbjct: 2 TISFNFNQF--HQNEEQLKLQRD--ARISSNSVLELTKVVNGVPTWNSTGRALYAKPVQV 57
Query: 77 FNTXXXXXXXXXXNFVFAI-----------GMAFVISP-SKDLGKAEASPSEYLGLFNAS 124
+++ F F+I G+ F I+P + G+ Y G++N
Sbjct: 58 WDSTTGNVASFETRFSFSIRQPFPRPHPADGLVFFIAPPNTQTGEGGG----YFGIYNP- 112
Query: 125 NNGQSTNHILAIELDTVQNLDFDDIDDNHVGIDVNSLISHESAPAAYFSDREGMNKTLEL 184
S +A+E DT +N D H+GIDVNS+IS ++ P + D G+ +
Sbjct: 113 ---LSPYPFVAVEFDTFRNTW--DPQIPHIGIDVNSVISTKTVP--FTLDNGGIANVV-- 163
Query: 185 IIGDPIQIWISYDGAEKLLNVTLAPMSIPKPTKPLLSRAINLSHILLETMYVGFSASTG- 243
I YD + K+L+V L S+ T ++ ++L +L E++ VGFSA+TG
Sbjct: 164 ---------IKYDASTKILHVVLVFPSL--GTIYTIADIVDLKQVLPESVNVGFSAATGD 212
Query: 244 ------SLKSSHYVLGWSFNRSGPALN 264
+ +H +L WSF+ S P N
Sbjct: 213 PSGKQRNATETHDILSWSFSASLPGTN 239
>pdb|1WBF|A Chain A, Winged Bean Lectin, Saccharide Free Form
pdb|1WBF|B Chain B, Winged Bean Lectin, Saccharide Free Form
pdb|2D3S|A Chain A, Crystal Structure Of Basic Winged Bean Lectin With
Tn-Antigen
pdb|2D3S|B Chain B, Crystal Structure Of Basic Winged Bean Lectin With
Tn-Antigen
pdb|2D3S|C Chain C, Crystal Structure Of Basic Winged Bean Lectin With
Tn-Antigen
pdb|2D3S|D Chain D, Crystal Structure Of Basic Winged Bean Lectin With
Tn-Antigen
Length = 242
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 123/267 (46%), Gaps = 53/267 (19%)
Query: 22 ALAQDVNQFIYHGFNEDAQLQRDGLASVHSNGLLQLTNTVSP----QQEGHAFYRLPIK- 76
++ + NQF H E +LQRD A + SN +L+LT V+ G A Y P++
Sbjct: 3 TISFNFNQF--HQNEEQLKLQRD--ARISSNSVLELTKVVNGVPTWNSTGRALYAKPVQV 58
Query: 77 FNTXXXXXXXXXXNFVFAI-----------GMAFVISP-SKDLGKAEASPSEYLGLFNAS 124
+++ F F+I G+ F I+P + G+ Y G++N
Sbjct: 59 WDSTTGNVASFETRFSFSIRQPFPRPHPADGLVFFIAPPNTQTGEGGG----YFGIYNP- 113
Query: 125 NNGQSTNHILAIELDTVQNLDFDDIDDNHVGIDVNSLISHESAPAAYFSDREGMNKTLEL 184
S +A+E DT +N D H+GIDVNS+IS ++ P + D G+ +
Sbjct: 114 ---LSPYPFVAVEFDTFRNTW--DPQIPHIGIDVNSVISTKTVP--FTLDNGGIANVV-- 164
Query: 185 IIGDPIQIWISYDGAEKLLNVTLAPMSIPKPTKPLLSRAINLSHILLETMYVGFSASTG- 243
I YD + K+L+V L S+ T ++ ++L +L E++ VGFSA+TG
Sbjct: 165 ---------IKYDASTKILHVVLVFPSL--GTIYTIADIVDLKQVLPESVNVGFSAATGD 213
Query: 244 ------SLKSSHYVLGWSFNRSGPALN 264
+ +H +L WSF+ S P N
Sbjct: 214 PSGKQRNATETHDILSWSFSASLPGTN 240
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 105/214 (49%), Gaps = 14/214 (6%)
Query: 347 FKDKDVIGRGGFGKVYRGVLASNVQI----AVKKVSHDSKQGIKEFVAELVSMGRLRHRN 402
F D V+GRGGFG+V+ + + ++ + K ++G + + E + ++ R
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRII---RGVASGLLYL 459
+V L K + LV M G + ++ N+ +Q R I + SGL +L
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIY-NVDEDNPGFQEPRAIFYTAQIVSGLEHL 305
Query: 460 HEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLA-RLYDHDTIPQTTKLVGTFGYMDPEL 518
H+ + +++RD+KP NVLLD D N ++ D GLA L T +T GT G+M PEL
Sbjct: 306 HQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT--KTKGYAGTPGFMAPEL 360
Query: 519 MRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGS 552
+ + S D +A GV + E+ + R P +G
Sbjct: 361 LLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 20/210 (9%)
Query: 347 FKDKDVIGRGGFGKVYRG-VLASNVQIAVKKVSHDSKQGIKEFVAELVS-----MGRLRH 400
FK ++G G F V LA++ + A+K + + + IKE V+ M RL H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILH---TNIKPCLNWYQRFRIIRGVASGLL 457
VKL + + Y NG L K + + + C +Y + S L
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-----TAEIVSALE 143
Query: 458 YLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTI-PQTTKLVGTFGYMDP 516
YLH + ++HRD+KP N+LL+ D++ ++ DFG A++ ++ + VGT Y+ P
Sbjct: 144 YLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSP 200
Query: 517 ELMRTGKASTSTDVYAFGVFMLEVASGRRP 546
EL+ A S+D++A G + ++ +G P
Sbjct: 201 ELLTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 102/206 (49%), Gaps = 17/206 (8%)
Query: 352 VIGRGGFGKVYRGV-----LASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKL 406
+G G G+V V A V+I K + D + IK+ E+ L H N+VK
Sbjct: 13 TLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKF 69
Query: 407 RGYCRRKGEF-LLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQ 465
G+ RR+G L +Y G L + +I QRF + +G++YLH
Sbjct: 70 YGH-RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLHG---I 123
Query: 466 VVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQ-TTKLVGTFGYMDPELMRTGK- 523
+ HRDIKP N+LLD N K+ DFGLA ++ ++ + K+ GT Y+ PEL++ +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 524 ASTSTDVYAFGVFMLEVASGRRPVEQ 549
+ DV++ G+ + + +G P +Q
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 20/210 (9%)
Query: 347 FKDKDVIGRGGFGKVYRG-VLASNVQIAVKKVSHDSKQGIKEFVAELVS-----MGRLRH 400
FK ++G G F V LA++ + A+K + + + IKE V+ M RL H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILH---TNIKPCLNWYQRFRIIRGVASGLL 457
VKL + + Y NG L K + + + C +Y + S L
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-----TAEIVSALE 143
Query: 458 YLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTI-PQTTKLVGTFGYMDP 516
YLH + ++HRD+KP N+LL+ D++ ++ DFG A++ ++ + VGT Y+ P
Sbjct: 144 YLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 200
Query: 517 ELMRTGKASTSTDVYAFGVFMLEVASGRRP 546
EL+ A S+D++A G + ++ +G P
Sbjct: 201 ELLTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 105/214 (49%), Gaps = 14/214 (6%)
Query: 347 FKDKDVIGRGGFGKVYRGVLASNVQI----AVKKVSHDSKQGIKEFVAELVSMGRLRHRN 402
F D V+GRGGFG+V+ + + ++ + K ++G + + E + ++ R
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRII---RGVASGLLYL 459
+V L K + LV M G + ++ N+ +Q R I + SGL +L
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIY-NVDEDNPGFQEPRAIFYTAQIVSGLEHL 305
Query: 460 HEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLA-RLYDHDTIPQTTKLVGTFGYMDPEL 518
H+ + +++RD+KP NVLLD D N ++ D GLA L T +T GT G+M PEL
Sbjct: 306 HQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT--KTKGYAGTPGFMAPEL 360
Query: 519 MRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGS 552
+ + S D +A GV + E+ + R P +G
Sbjct: 361 LLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 105/214 (49%), Gaps = 14/214 (6%)
Query: 347 FKDKDVIGRGGFGKVYRGVLASNVQI----AVKKVSHDSKQGIKEFVAELVSMGRLRHRN 402
F D V+GRGGFG+V+ + + ++ + K ++G + + E + ++ R
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRII---RGVASGLLYL 459
+V L K + LV M G + ++ N+ +Q R I + SGL +L
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIY-NVDEDNPGFQEPRAIFYTAQIVSGLEHL 305
Query: 460 HEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLA-RLYDHDTIPQTTKLVGTFGYMDPEL 518
H+ + +++RD+KP NVLLD D N ++ D GLA L T +T GT G+M PEL
Sbjct: 306 HQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT--KTKGYAGTPGFMAPEL 360
Query: 519 MRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGS 552
+ + S D +A GV + E+ + R P +G
Sbjct: 361 LLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 20/210 (9%)
Query: 347 FKDKDVIGRGGFGKVYRG-VLASNVQIAVKKVSHDSKQGIKEFVAELVS-----MGRLRH 400
FK ++G G F V LA++ + A+K + + + IKE V+ M RL H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILH---TNIKPCLNWYQRFRIIRGVASGLL 457
VKL + + Y NG L K + + + C +Y + S L
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-----TAEIVSALE 146
Query: 458 YLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTI-PQTTKLVGTFGYMDP 516
YLH + ++HRD+KP N+LL+ D++ ++ DFG A++ ++ + VGT Y+ P
Sbjct: 147 YLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 517 ELMRTGKASTSTDVYAFGVFMLEVASGRRP 546
EL+ A S+D++A G + ++ +G P
Sbjct: 204 ELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 20/210 (9%)
Query: 347 FKDKDVIGRGGFGKVYRG-VLASNVQIAVKKVSHDSKQGIKEFVAELVS-----MGRLRH 400
FK ++G G F V LA++ + A+K + + + IKE V+ M RL H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILH---TNIKPCLNWYQRFRIIRGVASGLL 457
VKL + + Y NG L K + + + C +Y + S L
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-----TAEIVSALE 147
Query: 458 YLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTI-PQTTKLVGTFGYMDP 516
YLH + ++HRD+KP N+LL+ D++ ++ DFG A++ ++ + VGT Y+ P
Sbjct: 148 YLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSP 204
Query: 517 ELMRTGKASTSTDVYAFGVFMLEVASGRRP 546
EL+ A S+D++A G + ++ +G P
Sbjct: 205 ELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 20/210 (9%)
Query: 347 FKDKDVIGRGGFGKVYRG-VLASNVQIAVKKVSHDSKQGIKEFVAELVS-----MGRLRH 400
FK ++G G F V LA++ + A+K + + + IKE V+ M RL H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILH---TNIKPCLNWYQRFRIIRGVASGLL 457
VKL + + Y NG L K + + + C +Y + S L
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-----TAEIVSALE 144
Query: 458 YLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTI-PQTTKLVGTFGYMDP 516
YLH + ++HRD+KP N+LL+ D++ ++ DFG A++ ++ + VGT Y+ P
Sbjct: 145 YLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSP 201
Query: 517 ELMRTGKASTSTDVYAFGVFMLEVASGRRP 546
EL+ A S+D++A G + ++ +G P
Sbjct: 202 ELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 20/210 (9%)
Query: 347 FKDKDVIGRGGFGKVYRG-VLASNVQIAVKKVSHDSKQGIKEFVAELVS-----MGRLRH 400
FK ++G G F V LA++ + A+K + + + IKE V+ M RL H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILH---TNIKPCLNWYQRFRIIRGVASGLL 457
VKL + + Y NG L K + + + C +Y + S L
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-----TAEIVSALE 144
Query: 458 YLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTI-PQTTKLVGTFGYMDP 516
YLH + ++HRD+KP N+LL+ D++ ++ DFG A++ ++ + VGT Y+ P
Sbjct: 145 YLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 201
Query: 517 ELMRTGKASTSTDVYAFGVFMLEVASGRRP 546
EL+ A S+D++A G + ++ +G P
Sbjct: 202 ELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 100/206 (48%), Gaps = 19/206 (9%)
Query: 353 IGRGGFGKV---YRGVLASNVQIAV---KKVSHDSKQGIKEFVAELVSMGRLRHRNLVKL 406
+G G FGKV Y V + + K ++ QG E E+ + LRH +++KL
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKL 79
Query: 407 RGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQV 466
+ K E ++V +Y N D I+ + ++ + R + + S + Y H
Sbjct: 80 YDVIKSKDEIIMVIEYAGNELFDYIVQRD---KMSEQEARRFFQQIISAVEYCHR---HK 133
Query: 467 VLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGK--A 524
++HRD+KP N+LLD LN K+ DFGL+ + +T+ G+ Y PE++ +GK A
Sbjct: 134 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPEVI-SGKLYA 190
Query: 525 STSTDVYAFGVFMLEVASGRRPVEQQ 550
DV++ GV + + R P + +
Sbjct: 191 GPEVDVWSCGVILYVMLCRRLPFDDE 216
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 20/210 (9%)
Query: 347 FKDKDVIGRGGFGKVYRG-VLASNVQIAVKKVSHDSKQGIKEFVAELVS-----MGRLRH 400
FK ++G G F V LA++ + A+K + + + IKE V+ M RL H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILH---TNIKPCLNWYQRFRIIRGVASGLL 457
VKL + + Y NG L K + + + C +Y + S L
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-----TAEIVSALE 144
Query: 458 YLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTI-PQTTKLVGTFGYMDP 516
YLH + ++HRD+KP N+LL+ D++ ++ DFG A++ ++ + VGT Y+ P
Sbjct: 145 YLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 201
Query: 517 ELMRTGKASTSTDVYAFGVFMLEVASGRRP 546
EL+ A S+D++A G + ++ +G P
Sbjct: 202 ELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 100/206 (48%), Gaps = 19/206 (9%)
Query: 353 IGRGGFGKV---YRGVLASNVQIAV---KKVSHDSKQGIKEFVAELVSMGRLRHRNLVKL 406
+G G FGKV Y V + + K ++ QG E E+ + LRH +++KL
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKL 78
Query: 407 RGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQV 466
+ K E ++V +Y N D I+ + ++ + R + + S + Y H
Sbjct: 79 YDVIKSKDEIIMVIEYAGNELFDYIVQRD---KMSEQEARRFFQQIISAVEYCHR---HK 132
Query: 467 VLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGK--A 524
++HRD+KP N+LLD LN K+ DFGL+ + +T+ G+ Y PE++ +GK A
Sbjct: 133 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPEVI-SGKLYA 189
Query: 525 STSTDVYAFGVFMLEVASGRRPVEQQ 550
DV++ GV + + R P + +
Sbjct: 190 GPEVDVWSCGVILYVMLCRRLPFDDE 215
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 124/277 (44%), Gaps = 34/277 (12%)
Query: 353 IGRGGFGKVYRGVL------ASNVQIAVKKVSHDSKQGIK-EFVAELVSMGRLRHRNLVK 405
+G+G FG VY G + ++AVK V+ + + EF+ E M ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 406 LRGYCRRKGEFLLVYDYMPNGSLDKILHT--------NIKPCLNWYQRFRIIRGVASGLL 457
L G + L+V + M +G L L + +P + ++ +A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 458 YLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDHDTIPQTTKLVGTFGYMDP 516
YL+ + +HR++ N ++ D K+GDFG+ R +Y+ D + K + +M P
Sbjct: 145 YLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 517 ELMRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASD 576
E ++ G +TS+D+++FGV + E+ S Q S E V + +V D G D D
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQV--LKFVMD----GGYLDQPD 255
Query: 577 SRLEGICEEKQMELVLKLGLFCSHPKPEARPNMRQVM 613
+ C E+ V L C P RP +++
Sbjct: 256 N-----CPER----VTDLMRMCWQFNPNMRPTFLEIV 283
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 105/214 (49%), Gaps = 14/214 (6%)
Query: 347 FKDKDVIGRGGFGKVYRGVLASNVQI----AVKKVSHDSKQGIKEFVAELVSMGRLRHRN 402
F D V+GRGGFG+V+ + + ++ + K ++G + + E + ++ R
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRII---RGVASGLLYL 459
+V L K + LV M G + ++ N+ +Q R I + SGL +L
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIY-NVDEDNPGFQEPRAIFYTAQIVSGLEHL 305
Query: 460 HEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLA-RLYDHDTIPQTTKLVGTFGYMDPEL 518
H+ + +++RD+KP NVLLD D N ++ D GLA L T +T GT G+M PEL
Sbjct: 306 HQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT--KTKGYAGTPGFMAPEL 360
Query: 519 MRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGS 552
+ + S D +A GV + E+ + R P +G
Sbjct: 361 LLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 101/194 (52%), Gaps = 9/194 (4%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDSK-QGI-KEFVAELVSMGRLRHRNLVKLRGYC 410
IG G +G VY+ A+KK+ + + +GI + E+ + L+H N+VKL
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 411 RRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHR 470
K +LV++++ + L K+L + L + + +G+ Y H+ + VLHR
Sbjct: 70 HTKKRLVLVFEHL-DQDLKKLLDV-CEGGLESVTAKSFLLQLLNGIAYCHD---RRVLHR 124
Query: 471 DIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPE-LMRTGKASTSTD 529
D+KP N+L++ + K+ DFGLAR + T ++V T Y P+ LM + K ST+ D
Sbjct: 125 DLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV-TLWYRAPDVLMGSKKYSTTID 183
Query: 530 VYAFGVFMLEVASG 543
+++ G E+ +G
Sbjct: 184 IWSVGCIFAEMVNG 197
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 20/210 (9%)
Query: 347 FKDKDVIGRGGFGKVYRG-VLASNVQIAVKKVSHDSKQGIKEFVAELVS-----MGRLRH 400
FK ++G G F V LA++ + A+K + + + IKE V+ M RL H
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILH---TNIKPCLNWYQRFRIIRGVASGLL 457
VKL + + Y NG L K + + + C +Y + S L
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-----TAEIVSALE 128
Query: 458 YLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTI-PQTTKLVGTFGYMDP 516
YLH + ++HRD+KP N+LL+ D++ ++ DFG A++ ++ + VGT Y+ P
Sbjct: 129 YLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 185
Query: 517 ELMRTGKASTSTDVYAFGVFMLEVASGRRP 546
EL+ A S+D++A G + ++ +G P
Sbjct: 186 ELLTEKSACKSSDLWALGCIIYQLVAGLPP 215
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 102/196 (52%), Gaps = 13/196 (6%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDSK-QGI-KEFVAELVSMGRLRHRNLVKLRGYC 410
IG G +G VY+ A+KK+ + + +GI + E+ + L+H N+VKL
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 411 RRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHR 470
K +LV++++ + L K+L + L + + +G+ Y H+ + VLHR
Sbjct: 70 HTKKRLVLVFEHL-DQDLKKLLDV-CEGGLESVTAKSFLLQLLNGIAYCHD---RRVLHR 124
Query: 471 DIKPANVLLDADLNGKLGDFGLARLYDHDTIP--QTTKLVGTFGYMDPE-LMRTGKASTS 527
D+KP N+L++ + K+ DFGLAR + IP + T V T Y P+ LM + K ST+
Sbjct: 125 DLKPQNLLINREGELKIADFGLARAFG---IPVRKYTHEVVTLWYRAPDVLMGSKKYSTT 181
Query: 528 TDVYAFGVFMLEVASG 543
D+++ G E+ +G
Sbjct: 182 IDIWSVGCIFAEMVNG 197
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 102/196 (52%), Gaps = 13/196 (6%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDSK-QGI-KEFVAELVSMGRLRHRNLVKLRGYC 410
IG G +G VY+ A+KK+ + + +GI + E+ + L+H N+VKL
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 411 RRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHR 470
K +LV++++ + L K+L + L + + +G+ Y H+ + VLHR
Sbjct: 70 HTKKRLVLVFEHL-DQDLKKLLDV-CEGGLESVTAKSFLLQLLNGIAYCHD---RRVLHR 124
Query: 471 DIKPANVLLDADLNGKLGDFGLARLYDHDTIP--QTTKLVGTFGYMDPE-LMRTGKASTS 527
D+KP N+L++ + K+ DFGLAR + IP + T V T Y P+ LM + K ST+
Sbjct: 125 DLKPQNLLINREGELKIADFGLARAFG---IPVRKYTHEVVTLWYRAPDVLMGSKKYSTT 181
Query: 528 TDVYAFGVFMLEVASG 543
D+++ G E+ +G
Sbjct: 182 IDIWSVGCIFAEMVNG 197
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 100/207 (48%), Gaps = 19/207 (9%)
Query: 353 IGRGGFGKV---YRGVLASNVQIAV---KKVSHDSKQGIKEFVAELVSMGRLRHRNLVKL 406
+G G FGKV Y V + + K ++ QG E E+ + LRH +++KL
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKL 69
Query: 407 RGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQV 466
+ K E ++V +Y N D I+ + ++ + R + + S + Y H
Sbjct: 70 YDVIKSKDEIIMVIEYAGNELFDYIVQRD---KMSEQEARRFFQQIISAVEYCHR---HK 123
Query: 467 VLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGK--A 524
++HRD+KP N+LLD LN K+ DFGL+ + +T+ G+ Y PE++ +GK A
Sbjct: 124 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPEVI-SGKLYA 180
Query: 525 STSTDVYAFGVFMLEVASGRRPVEQQG 551
DV++ GV + + R P + +
Sbjct: 181 GPEVDVWSCGVILYVMLCRRLPFDDES 207
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 124/277 (44%), Gaps = 34/277 (12%)
Query: 353 IGRGGFGKVYRGVL------ASNVQIAVKKVSHDSKQGIK-EFVAELVSMGRLRHRNLVK 405
+G+G FG VY G + ++AVK V+ + + EF+ E M ++V+
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 406 LRGYCRRKGEFLLVYDYMPNGSLDKILHT--------NIKPCLNWYQRFRIIRGVASGLL 457
L G + L+V + M +G L L + +P + ++ +A G+
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 458 YLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDHDTIPQTTKLVGTFGYMDP 516
YL+ + +HR++ N ++ D K+GDFG+ R +Y+ D + K + +M P
Sbjct: 146 YLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 202
Query: 517 ELMRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASD 576
E ++ G +TS+D+++FGV + E+ S Q S E V + +V D G D D
Sbjct: 203 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQV--LKFVMD----GGYLDQPD 256
Query: 577 SRLEGICEEKQMELVLKLGLFCSHPKPEARPNMRQVM 613
+ C E+ V L C P RP +++
Sbjct: 257 N-----CPER----VTDLMRMCWQFNPNMRPTFLEIV 284
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 100/206 (48%), Gaps = 19/206 (9%)
Query: 353 IGRGGFGKV---YRGVLASNVQIAV---KKVSHDSKQGIKEFVAELVSMGRLRHRNLVKL 406
+G G FGKV Y V + + K ++ QG E E+ + LRH +++KL
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKL 73
Query: 407 RGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQV 466
+ K E ++V +Y N D I+ + ++ + R + + S + Y H
Sbjct: 74 YDVIKSKDEIIMVIEYAGNELFDYIVQRD---KMSEQEARRFFQQIISAVEYCHR---HK 127
Query: 467 VLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGK--A 524
++HRD+KP N+LLD LN K+ DFGL+ + +T+ G+ Y PE++ +GK A
Sbjct: 128 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPEVI-SGKLYA 184
Query: 525 STSTDVYAFGVFMLEVASGRRPVEQQ 550
DV++ GV + + R P + +
Sbjct: 185 GPEVDVWSCGVILYVMLCRRLPFDDE 210
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 20/210 (9%)
Query: 347 FKDKDVIGRGGFGKVYRG-VLASNVQIAVKKVSHDSKQGIKEFVAELVS-----MGRLRH 400
FK ++G G F V LA++ + A+K + + + IKE V+ M RL H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILH---TNIKPCLNWYQRFRIIRGVASGLL 457
VKL + + Y NG L K + + + C +Y + S L
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-----TAEIVSALE 146
Query: 458 YLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTI-PQTTKLVGTFGYMDP 516
YLH + ++HRD+KP N+LL+ D++ ++ DFG A++ ++ + VGT Y+ P
Sbjct: 147 YLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 517 ELMRTGKASTSTDVYAFGVFMLEVASGRRP 546
EL+ A S+D++A G + ++ +G P
Sbjct: 204 ELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 20/210 (9%)
Query: 347 FKDKDVIGRGGFGKVYRG-VLASNVQIAVKKVSHDSKQGIKEFVAELVS-----MGRLRH 400
FK ++G G F V LA++ + A+K + + + IKE V+ M RL H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILH---TNIKPCLNWYQRFRIIRGVASGLL 457
VKL + + Y NG L K + + + C +Y + S L
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-----TAEIVSALE 146
Query: 458 YLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTI-PQTTKLVGTFGYMDP 516
YLH + ++HRD+KP N+LL+ D++ ++ DFG A++ ++ + VGT Y+ P
Sbjct: 147 YLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 517 ELMRTGKASTSTDVYAFGVFMLEVASGRRP 546
EL+ A S+D++A G + ++ +G P
Sbjct: 204 ELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 20/210 (9%)
Query: 347 FKDKDVIGRGGFGKVYRG-VLASNVQIAVKKVSHDSKQGIKEFVAELVS-----MGRLRH 400
FK ++G G F V LA++ + A+K + + + IKE V+ M RL H
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILH---TNIKPCLNWYQRFRIIRGVASGLL 457
VKL + + Y NG L K + + + C +Y + S L
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-----TAEIVSALE 149
Query: 458 YLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTI-PQTTKLVGTFGYMDP 516
YLH + ++HRD+KP N+LL+ D++ ++ DFG A++ ++ + VGT Y+ P
Sbjct: 150 YLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 206
Query: 517 ELMRTGKASTSTDVYAFGVFMLEVASGRRP 546
EL+ A S+D++A G + ++ +G P
Sbjct: 207 ELLTEKSACKSSDLWALGCIIYQLVAGLPP 236
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 20/210 (9%)
Query: 347 FKDKDVIGRGGFGKVYRG-VLASNVQIAVKKVSHDSKQGIKEFVAELVS-----MGRLRH 400
FK ++G G F V LA++ + A+K + + + IKE V+ M RL H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILH---TNIKPCLNWYQRFRIIRGVASGLL 457
VKL + + Y NG L K + + + C +Y + S L
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-----TAEIVSALE 147
Query: 458 YLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTI-PQTTKLVGTFGYMDP 516
YLH + ++HRD+KP N+LL+ D++ ++ DFG A++ ++ + VGT Y+ P
Sbjct: 148 YLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 204
Query: 517 ELMRTGKASTSTDVYAFGVFMLEVASGRRP 546
EL+ A S+D++A G + ++ +G P
Sbjct: 205 ELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 105/220 (47%), Gaps = 34/220 (15%)
Query: 347 FKDKDVIGRGGFGKVYRGVLASN---VQIAVKKV-SHDSKQGIKEFVAELVSMGRL-RHR 401
K +DVIG G FG+V + + + + A+K++ + SK ++F EL + +L H
Sbjct: 24 IKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHP 83
Query: 402 NLVKLRGYCRRKGEFLLVYDYMPNGSL------DKILHTN--------IKPCLNWYQRFR 447
N++ L G C +G L +Y P+G+L ++L T+ L+ Q
Sbjct: 84 NIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 143
Query: 448 IIRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKL 507
VA G+ YL ++ +HR++ N+L+ + K+ DFGL+R Q +
Sbjct: 144 FAADVARGMDYLS---QKQFIHRNLAARNILVGENYVAKIADFGLSR-------GQEVYV 193
Query: 508 VGTFG-----YMDPELMRTGKASTSTDVYAFGVFMLEVAS 542
T G +M E + +T++DV+++GV + E+ S
Sbjct: 194 KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 111/218 (50%), Gaps = 20/218 (9%)
Query: 352 VIGRGGFGKVY--RGVLASNV-QIAVKKVSHDSKQGIKEFV---AELVSMGRLRHRNLVK 405
V+G+G FGKV+ + + S+ Q+ KV + +++ V E + + H +VK
Sbjct: 32 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVK 91
Query: 406 LRGYCRRKGEFLLVYDYMPNGSLDKILHTNI---KPCLNWYQRFRIIRGVASGLLYLHED 462
L + +G+ L+ D++ G L L + + + +Y + +A L +LH
Sbjct: 92 LHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFY-----LAELALALDHLHS- 145
Query: 463 WEQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDHDTIPQTTKLVGTFGYMDPELMRT 521
+++RD+KP N+LLD + + KL DFGL++ DH+ + GT YM PE++
Sbjct: 146 --LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK--KAYSFCGTVEYMAPEVVNR 201
Query: 522 GKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLV 559
+ S D ++FGV M E+ +G P + + ET+ ++
Sbjct: 202 RGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMI 239
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 108/211 (51%), Gaps = 23/211 (10%)
Query: 347 FKDKDVIGRGGFGKVYRGVLASNV----QIAVKKVSH---DSKQGIKEFVAELVSMGRLR 399
+K + V+G+G FG+V +L + + AVK +S K + + E+ + +L
Sbjct: 28 YKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 400 HRNLVKLRGYCRRKGEFLLVYDYMPNGSL-DKILHTNIKPCLNWYQRFRIIRGVASGLLY 458
H N+ KL + KG F LV + G L D+I+ + + RIIR V SG+ Y
Sbjct: 85 HPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIIS---RKRFSEVDAARIIRQVLSGITY 141
Query: 459 LHEDWEQVVLHRDIKPANVLLDA---DLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMD 515
H++ ++HRD+KP N+LL++ D N ++ DFGL+ + + + +GT Y+
Sbjct: 142 XHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF--EASKKXKDKIGTAYYIA 196
Query: 516 PELMRTGKASTSTDVYAFGVFMLEVASGRRP 546
PE++ G DV++ GV + + SG P
Sbjct: 197 PEVLH-GTYDEKCDVWSTGVILYILLSGCPP 226
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 105/202 (51%), Gaps = 16/202 (7%)
Query: 352 VIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQG--IKEFVAELVSMGRLRHRNLVKLRG 408
++G+G FG+V + + + AVK ++ S + + E+ + +L H N++KL
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 409 YCRRKGEFLLVYDYMPNGSL-DKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVV 467
F +V + G L D+I+ + + + RII+ V SG+ Y+H+ +
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIK---RKRFSEHDAARIIKQVFSGITYMHK---HNI 142
Query: 468 LHRDIKPANVLLDA---DLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKA 524
+HRD+KP N+LL++ D + K+ DFGL+ + +T + +GT Y+ PE++R G
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT--KMKDRIGTAYYIAPEVLR-GTY 199
Query: 525 STSTDVYAFGVFMLEVASGRRP 546
DV++ GV + + SG P
Sbjct: 200 DEKCDVWSAGVILYILLSGTPP 221
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 20/210 (9%)
Query: 347 FKDKDVIGRGGFGKVYRG-VLASNVQIAVKKVSHDSKQGIKEFVAELVS-----MGRLRH 400
FK ++G G F V LA++ + A+K + + + IKE V+ M RL H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILH---TNIKPCLNWYQRFRIIRGVASGLL 457
VKL + + Y NG L K + + + C +Y + S L
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-----TAEIVSALE 146
Query: 458 YLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTI-PQTTKLVGTFGYMDP 516
YLH + ++HRD+KP N+LL+ D++ ++ DFG A++ ++ + VGT Y+ P
Sbjct: 147 YLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 517 ELMRTGKASTSTDVYAFGVFMLEVASGRRP 546
EL+ A S+D++A G + ++ +G P
Sbjct: 204 ELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 105/202 (51%), Gaps = 16/202 (7%)
Query: 352 VIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQG--IKEFVAELVSMGRLRHRNLVKLRG 408
++G+G FG+V + + + AVK ++ S + + E+ + +L H N++KL
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 409 YCRRKGEFLLVYDYMPNGSL-DKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVV 467
F +V + G L D+I+ + + + RII+ V SG+ Y+H+ +
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIK---RKRFSEHDAARIIKQVFSGITYMHK---HNI 142
Query: 468 LHRDIKPANVLLDA---DLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKA 524
+HRD+KP N+LL++ D + K+ DFGL+ + +T + +GT Y+ PE++R G
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT--KMKDRIGTAYYIAPEVLR-GTY 199
Query: 525 STSTDVYAFGVFMLEVASGRRP 546
DV++ GV + + SG P
Sbjct: 200 DEKCDVWSAGVILYILLSGTPP 221
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 111/218 (50%), Gaps = 20/218 (9%)
Query: 352 VIGRGGFGKVY--RGVLASNV-QIAVKKVSHDSKQGIKEFV---AELVSMGRLRHRNLVK 405
V+G+G FGKV+ + + S+ Q+ KV + +++ V E + + H +VK
Sbjct: 31 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVK 90
Query: 406 LRGYCRRKGEFLLVYDYMPNGSLDKILHTNI---KPCLNWYQRFRIIRGVASGLLYLHED 462
L + +G+ L+ D++ G L L + + + +Y + +A L +LH
Sbjct: 91 LHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFY-----LAELALALDHLHS- 144
Query: 463 WEQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDHDTIPQTTKLVGTFGYMDPELMRT 521
+++RD+KP N+LLD + + KL DFGL++ DH+ + GT YM PE++
Sbjct: 145 --LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK--KAYSFCGTVEYMAPEVVNR 200
Query: 522 GKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLV 559
+ S D ++FGV M E+ +G P + + ET+ ++
Sbjct: 201 RGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMI 238
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 127/287 (44%), Gaps = 51/287 (17%)
Query: 347 FKDKDVIGRGGFGKVYRGVLASNVQI-AVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVK 405
FK+ ++IG GGFG+V++ + + +K+V +++++ +E A + +L H N+V
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKA----LAKLDHVNIVH 68
Query: 406 LRG---------------YCRRKGEFLLV-YDYMPNGSLDKILHTNIKPCLNWYQRFRII 449
G R K + L + ++ G+L++ + L+ +
Sbjct: 69 YNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELF 128
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG 509
+ G+ Y+H + +++RD+KP+N+ L K+GDFGL +D +K G
Sbjct: 129 EQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSK--G 183
Query: 510 TFGYMDPELMRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWVCDCWKKG 569
T YM PE + + D+YA G+ + E+ VCD +
Sbjct: 184 TLRYMSPEQISSQDYGKEVDLYALGLILAELLH-------------------VCDTAFET 224
Query: 570 A--IRDASDSRLEGICEEKQMELVLKLGLFCSHPKPEARPNMRQVMQ 614
+ D D + I ++K+ L+ KL KPE RPN ++++
Sbjct: 225 SKFFTDLRDGIISDIFDKKEKTLLQKL----LSKKPEDRPNTSEILR 267
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 20/210 (9%)
Query: 347 FKDKDVIGRGGFGKVYRG-VLASNVQIAVKKVSHDSKQGIKEFVAELVS-----MGRLRH 400
FK ++G G F V LA++ + A+K + + + IKE V+ M RL H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILH---TNIKPCLNWYQRFRIIRGVASGLL 457
VKL + + Y NG L K + + + C +Y + S L
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-----TAEIVSALE 146
Query: 458 YLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTI-PQTTKLVGTFGYMDP 516
YLH + ++HRD+KP N+LL+ D++ ++ DFG A++ ++ + VGT Y+ P
Sbjct: 147 YLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 517 ELMRTGKASTSTDVYAFGVFMLEVASGRRP 546
EL+ A S+D++A G + ++ +G P
Sbjct: 204 ELLTEKSAXKSSDLWALGCIIYQLVAGLPP 233
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 99/201 (49%), Gaps = 16/201 (7%)
Query: 353 IGRGGFGKVYRGVL-----ASNVQIAVKKVSHDSK-QGIKEFVAELVSMGRLRHRNLVKL 406
+G G FGKV + Q+AVK + +S I + E+ + L H N+VK
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 407 RGYCRRKGE--FLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWE 464
+G C G L+ +++P+GSL + L N K +N Q+ + + G+ YL
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKN-KNKINLKQQLKYAVQICKGMDYL---GS 144
Query: 465 QVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTK---LVGTFGYMDPELMRT 521
+ +HRD+ NVL++++ K+GDFGL + + D T K F Y PE +
Sbjct: 145 RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYA-PECLMQ 203
Query: 522 GKASTSTDVYAFGVFMLEVAS 542
K ++DV++FGV + E+ +
Sbjct: 204 SKFYIASDVWSFGVTLHELLT 224
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 102/210 (48%), Gaps = 11/210 (5%)
Query: 353 IGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCR 411
+G G FGKVY+ ++V A K + S++ +++++ E+ + H N+VKL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 412 RKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRD 471
+ ++ ++ G++D ++ +P L Q + + L YLH++ ++HRD
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERP-LTESQIQVVCKQTLDALNYLHDN---KIIHRD 160
Query: 472 IKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKAST----- 526
+K N+L D + KL DFG++ + I + +GT +M PE++ +
Sbjct: 161 LKAGNILFTLDGDIKLADFGVSA-KNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDY 219
Query: 527 STDVYAFGVFMLEVASGRRPVEQQGSMETV 556
DV++ G+ ++E+A P + M +
Sbjct: 220 KADVWSLGITLIEMAEIEPPHHELNPMRVL 249
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 124/277 (44%), Gaps = 34/277 (12%)
Query: 353 IGRGGFGKVYRGVL------ASNVQIAVKKVSHDSKQGIK-EFVAELVSMGRLRHRNLVK 405
+G+G FG VY G + ++AVK V+ + + EF+ E M ++V+
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 406 LRGYCRRKGEFLLVYDYMPNGSLDKILHT--------NIKPCLNWYQRFRIIRGVASGLL 457
L G + L+V + M +G L L + +P + ++ +A G+
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 458 YLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDHDTIPQTTKLVGTFGYMDP 516
YL+ + +HRD+ N ++ D K+GDFG+ R + + D + K + +M P
Sbjct: 142 YLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 198
Query: 517 ELMRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASD 576
E ++ G +TS+D+++FGV + E+ S Q S E V + +V D G D D
Sbjct: 199 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQV--LKFVMD----GGYLDQPD 252
Query: 577 SRLEGICEEKQMELVLKLGLFCSHPKPEARPNMRQVM 613
+ C E+ V L C P+ RP +++
Sbjct: 253 N-----CPER----VTDLMRMCWQFNPKMRPTFLEIV 280
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 20/210 (9%)
Query: 347 FKDKDVIGRGGFGK-VYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVS-----MGRLRH 400
FK ++G G F V LA++ + A+K + + + IKE V+ M RL H
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILH---TNIKPCLNWYQRFRIIRGVASGLL 457
VKL + + Y NG L K + + + C +Y + S L
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY-----TAEIVSALE 144
Query: 458 YLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTI-PQTTKLVGTFGYMDP 516
YLH + ++HRD+KP N+LL+ D++ ++ DFG A++ ++ + VGT Y+ P
Sbjct: 145 YLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 201
Query: 517 ELMRTGKASTSTDVYAFGVFMLEVASGRRP 546
EL+ A S+D++A G + ++ +G P
Sbjct: 202 ELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 124/277 (44%), Gaps = 34/277 (12%)
Query: 353 IGRGGFGKVYRGVL------ASNVQIAVKKVSHDSKQGIK-EFVAELVSMGRLRHRNLVK 405
+G+G FG VY G + ++AVK V+ + + EF+ E M ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 406 LRGYCRRKGEFLLVYDYMPNGSLDKILHT--------NIKPCLNWYQRFRIIRGVASGLL 457
L G + L+V + M +G L L + +P + ++ +A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 458 YLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDHDTIPQTTKLVGTFGYMDP 516
YL+ + +HRD+ N ++ D K+GDFG+ R + + D + K + +M P
Sbjct: 145 YLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 517 ELMRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASD 576
E ++ G +TS+D+++FGV + E+ S Q S E V + +V D G D D
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQV--LKFVMD----GGYLDQPD 255
Query: 577 SRLEGICEEKQMELVLKLGLFCSHPKPEARPNMRQVM 613
+ C E+ V L C P+ RP +++
Sbjct: 256 N-----CPER----VTDLMRMCWQFNPKMRPTFLEIV 283
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 104/230 (45%), Gaps = 26/230 (11%)
Query: 353 IGRGGFGKVYRGVL-----ASNVQIAVKKVSHDSKQGI--KEFVAELVSMGRLRHRNLVK 405
+G FGKVY+G L Q K D +G +EF E + RL+H N+V
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 406 LRGYCRRKGEFLLVYDYMPNGSLDKIL-----HTN---------IKPCLNWYQRFRIIRG 451
L G + +++ Y +G L + L H++ +K L ++
Sbjct: 94 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 153
Query: 452 VASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDHDTIPQTTKLVGT 510
+A+G+ YL V+H+D+ NVL+ LN K+ D GL R +Y D +
Sbjct: 154 IAAGMEYLS---SHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 210
Query: 511 FGYMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLV 559
+M PE + GK S +D++++GV + EV S G +P + + V ++
Sbjct: 211 IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMI 260
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 100/204 (49%), Gaps = 11/204 (5%)
Query: 347 FKDKDVIGRGGFGKVYRGVLASNVQIAVKKVSH-DSKQGIK-EFVAELVSMGRLRHRNLV 404
F+ +G G G V + + I +K+ H + K I+ + + EL + +V
Sbjct: 18 FERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 77
Query: 405 KLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWE 464
G GE + ++M GSLD++L + + I V GL YL E +
Sbjct: 78 GFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSI--AVLRGLAYLREKHQ 135
Query: 465 QVVLHRDIKPANVLLDADLNGKLGDFGLA-RLYDHDTIPQTTKLVGTFGYMDPELMRTGK 523
++HRD+KP+N+L+++ KL DFG++ +L D VGT YM PE ++
Sbjct: 136 --IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMAPERLQGTH 189
Query: 524 ASTSTDVYAFGVFMLEVASGRRPV 547
S +D+++ G+ ++E+A GR P+
Sbjct: 190 YSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 130/307 (42%), Gaps = 78/307 (25%)
Query: 347 FKDKDVIGRGGFGKVYRGVLASNVQI-AVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVK 405
FK+ ++IG GGFG+V++ + + +++V +++++ +E A + +L H N+V
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAEREVKA----LAKLDHVNIVH 69
Query: 406 LRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKP------------CL------------- 440
G C +DY P S D + ++ P CL
Sbjct: 70 YNG-CWDG------FDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLE 122
Query: 441 NWYQRFR-----------IIRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGD 489
W ++ R + + G+ Y+H + ++HRD+KP+N+ L K+GD
Sbjct: 123 QWIEKRRGEKLDKVLALELFEQITKGVDYIHS---KKLIHRDLKPSNIFLVDTKQVKIGD 179
Query: 490 FGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEVASGRRPVEQ 549
FGL +D + T+ GT YM PE + + D+YA G+ + E+
Sbjct: 180 FGLVTSLKND--GKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLH------- 230
Query: 550 QGSMETVNLVDWVCDCWKKGA--IRDASDSRLEGICEEKQMELVLKLGLFCSHPKPEARP 607
VCD + + D D + I ++K+ L+ KL KPE RP
Sbjct: 231 ------------VCDTAFETSKFFTDLRDGIISDIFDKKEKTLLQKL----LSKKPEDRP 274
Query: 608 NMRQVMQ 614
N ++++
Sbjct: 275 NTSEILR 281
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 99/201 (49%), Gaps = 16/201 (7%)
Query: 353 IGRGGFGKVYRGVL-----ASNVQIAVKKVSHDSK-QGIKEFVAELVSMGRLRHRNLVKL 406
+G G FGKV + Q+AVK + +S I + E+ + L H N+VK
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 407 RGYCRRKGE--FLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWE 464
+G C G L+ +++P+GSL + L N K +N Q+ + + G+ YL
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKN-KNKINLKQQLKYAVQICKGMDYL---GS 132
Query: 465 QVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTK---LVGTFGYMDPELMRT 521
+ +HRD+ NVL++++ K+GDFGL + + D T K F Y PE +
Sbjct: 133 RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYA-PECLMQ 191
Query: 522 GKASTSTDVYAFGVFMLEVAS 542
K ++DV++FGV + E+ +
Sbjct: 192 SKFYIASDVWSFGVTLHELLT 212
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 115/266 (43%), Gaps = 24/266 (9%)
Query: 353 IGRGGFGKVYRGVL-ASNVQIAVKKVSHDSKQGIK-EFVAELVSMGRLRHRNLVKLRGYC 410
IGRG FG+V+ G L A N +AVK +K +F+ E + + H N+V+L G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 411 RRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHR 470
+K +V + + G L T L +++ A+G+ YL + +HR
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTE-GARLRVKTLLQMVGDAAAGMEYLES---KCCIHR 237
Query: 471 DIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGT-FGYMDPELMRTGKASTSTD 529
D+ N L+ K+ DFG++R + L + PE + G+ S+ +D
Sbjct: 238 DLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESD 297
Query: 530 VYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASDSRLEGICEEKQM 588
V++FG+ + E S G P + +T V+ KG RL C E
Sbjct: 298 VWSFGILLWETFSLGASPYPNLSNQQTREFVE-------KGG-------RLP--CPELCP 341
Query: 589 ELVLKLGLFCSHPKPEARPNMRQVMQ 614
+ V +L C +P RP+ + Q
Sbjct: 342 DAVFRLMEQCWAYEPGQRPSFSTIYQ 367
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 124/277 (44%), Gaps = 34/277 (12%)
Query: 353 IGRGGFGKVYRGVL------ASNVQIAVKKVSHDSKQGIK-EFVAELVSMGRLRHRNLVK 405
+G+G FG VY G + ++AVK V+ + + EF+ E M ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 406 LRGYCRRKGEFLLVYDYMPNGSLDKILHT--------NIKPCLNWYQRFRIIRGVASGLL 457
L G + L+V + M +G L L + +P + ++ +A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 458 YLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDHDTIPQTTKLVGTFGYMDP 516
YL+ + +HRD+ N ++ D K+GDFG+ R +Y+ + K + +M P
Sbjct: 145 YLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAP 201
Query: 517 ELMRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASD 576
E ++ G +TS+D+++FGV + E+ S Q S E V + +V D G D D
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQV--LKFVMD----GGYLDQPD 255
Query: 577 SRLEGICEEKQMELVLKLGLFCSHPKPEARPNMRQVM 613
+ C E+ V L C P+ RP +++
Sbjct: 256 N-----CPER----VTDLMRMCWQFNPKMRPTFLEIV 283
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 102/210 (48%), Gaps = 11/210 (5%)
Query: 353 IGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCR 411
+G G FGKVY+ ++V A K + S++ +++++ E+ + H N+VKL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 412 RKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRD 471
+ ++ ++ G++D ++ +P L Q + + L YLH++ ++HRD
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERP-LTESQIQVVCKQTLDALNYLHDN---KIIHRD 160
Query: 472 IKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKAST----- 526
+K N+L D + KL DFG++ + I + +GT +M PE++ +
Sbjct: 161 LKAGNILFTLDGDIKLADFGVSA-KNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDY 219
Query: 527 STDVYAFGVFMLEVASGRRPVEQQGSMETV 556
DV++ G+ ++E+A P + M +
Sbjct: 220 KADVWSLGITLIEMAEIEPPHHELNPMRVL 249
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 115/266 (43%), Gaps = 24/266 (9%)
Query: 353 IGRGGFGKVYRGVL-ASNVQIAVKKVSHDSKQGIK-EFVAELVSMGRLRHRNLVKLRGYC 410
IGRG FG+V+ G L A N +AVK +K +F+ E + + H N+V+L G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 411 RRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHR 470
+K +V + + G L T L +++ A+G+ YL + +HR
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTE-GARLRVKTLLQMVGDAAAGMEYLES---KCCIHR 237
Query: 471 DIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGT-FGYMDPELMRTGKASTSTD 529
D+ N L+ K+ DFG++R + L + PE + G+ S+ +D
Sbjct: 238 DLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESD 297
Query: 530 VYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASDSRLEGICEEKQM 588
V++FG+ + E S G P + +T V+ KG RL C E
Sbjct: 298 VWSFGILLWETFSLGASPYPNLSNQQTREFVE-------KGG-------RLP--CPELCP 341
Query: 589 ELVLKLGLFCSHPKPEARPNMRQVMQ 614
+ V +L C +P RP+ + Q
Sbjct: 342 DAVFRLMEQCWAYEPGQRPSFSTIYQ 367
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 123/277 (44%), Gaps = 34/277 (12%)
Query: 353 IGRGGFGKVYRGVL------ASNVQIAVKKVSHDSKQGIK-EFVAELVSMGRLRHRNLVK 405
+G+G FG VY G + ++AVK V+ + + EF+ E M ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 406 LRGYCRRKGEFLLVYDYMPNGSLDKILHT--------NIKPCLNWYQRFRIIRGVASGLL 457
L G + L+V + M +G L L + +P + ++ +A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 458 YLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDHDTIPQTTKLVGTFGYMDP 516
YL+ + +HRD+ N ++ D K+GDFG+ R + + D + K + +M P
Sbjct: 145 YLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 517 ELMRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASD 576
E ++ G +TS+D+++FGV + E+ S Q S E V + +V D G D D
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQV--LKFVMD----GGYLDQPD 255
Query: 577 SRLEGICEEKQMELVLKLGLFCSHPKPEARPNMRQVM 613
+ C E+ V L C P RP +++
Sbjct: 256 N-----CPER----VTDLMRMCWQFNPNMRPTFLEIV 283
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 104/230 (45%), Gaps = 26/230 (11%)
Query: 353 IGRGGFGKVYRGVL-----ASNVQIAVKKVSHDSKQGI--KEFVAELVSMGRLRHRNLVK 405
+G FGKVY+G L Q K D +G +EF E + RL+H N+V
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 406 LRGYCRRKGEFLLVYDYMPNGSLDKIL-----HTN---------IKPCLNWYQRFRIIRG 451
L G + +++ Y +G L + L H++ +K L ++
Sbjct: 77 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 136
Query: 452 VASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDHDTIPQTTKLVGT 510
+A+G+ YL V+H+D+ NVL+ LN K+ D GL R +Y D +
Sbjct: 137 IAAGMEYLS---SHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 193
Query: 511 FGYMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLV 559
+M PE + GK S +D++++GV + EV S G +P + + V ++
Sbjct: 194 IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMI 243
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 99/216 (45%), Gaps = 18/216 (8%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDSKQG------IKEFVAELVSMGRLRHRNLVKL 406
IG+G FGKV ++ N + + + +KQ ++ EL M L H LV L
Sbjct: 23 IGKGSFGKV--CIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNL 80
Query: 407 RGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQV 466
+ + + +V D + G L L N+ + F I + L YL Q
Sbjct: 81 WYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLF--ICELVMALDYLQN---QR 135
Query: 467 VLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKA-- 524
++HRD+KP N+LLD + + DF +A + +T Q T + GT YM PE+ + K
Sbjct: 136 IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET--QITTMAGTKPYMAPEMFSSRKGAG 193
Query: 525 -STSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLV 559
S + D ++ GV E+ GRRP + S + +V
Sbjct: 194 YSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIV 229
>pdb|2E7Q|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Trisaccharide
pdb|2E7Q|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Trisaccharide
pdb|2E7Q|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Trisaccharide
pdb|2E7Q|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Trisaccharide
pdb|2E7T|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Trisaccharide
pdb|2E7T|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Trisaccharide
pdb|2E7T|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Trisaccharide
pdb|2E7T|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Trisaccharide
Length = 237
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 122/265 (46%), Gaps = 53/265 (20%)
Query: 22 ALAQDVNQFIYHGFNEDAQLQRDGLASVHSNGLLQLTNTVSP----QQEGHAFYRLPIK- 76
++ + NQF H E +LQRD A + SN +L+LT V+ G A Y P++
Sbjct: 2 TISFNFNQF--HQNEEQLKLQRD--ARISSNSVLELTKVVNGVPTWNSTGRALYAKPVQV 57
Query: 77 FNTXXXXXXXXXXNFVFAI-----------GMAFVISP-SKDLGKAEASPSEYLGLFNAS 124
+++ F F+I G+ F I+P + G+ Y G++N
Sbjct: 58 WDSTTGNVASFETRFSFSIRQPFPRPHPADGLVFFIAPPNTQTGEGGG----YFGIYNP- 112
Query: 125 NNGQSTNHILAIELDTVQNLDFDDIDDNHVGIDVNSLISHESAPAAYFSDREGMNKTLEL 184
S +A+E DT +N D H+GIDVNS+IS ++ P + D G+ +
Sbjct: 113 ---LSPYPFVAVEFDTFRNTW--DPQIPHIGIDVNSVISTKTVP--FTLDNGGIANVV-- 163
Query: 185 IIGDPIQIWISYDGAEKLLNVTLAPMSIPKPTKPLLSRAINLSHILLETMYVGFSASTG- 243
I YD + K+L+V L S+ T ++ ++L +L E++ VGFSA+TG
Sbjct: 164 ---------IKYDASTKILHVVLVFPSL--GTIYTIADIVDLKQVLPESVNVGFSAATGD 212
Query: 244 ------SLKSSHYVLGWSFNRSGPA 262
+ +H +L WSF+ S P
Sbjct: 213 PSGKQRNATETHDILSWSFSASLPG 237
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 96/194 (49%), Gaps = 10/194 (5%)
Query: 352 VIGRGGFGKVYRGVLAS----NVQIAVKKVSHDSKQGIKE-FVAELVSMGRLRHRNLVKL 406
IG G FG V++G+ S + +A+K + + ++E F+ E ++M + H ++VKL
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 407 RGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQV 466
G + ++ + G L L K L+ +++ L YL +
Sbjct: 77 IGVIT-ENPVWIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLES---KR 131
Query: 467 VLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKAST 526
+HRDI NVL+ ++ KLGDFGL+R + T + +K +M PE + + ++
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRRFTS 191
Query: 527 STDVYAFGVFMLEV 540
++DV+ FGV M E+
Sbjct: 192 ASDVWMFGVCMWEI 205
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 108/209 (51%), Gaps = 19/209 (9%)
Query: 345 KGFKDKDVIGRGGFGKVY--RGVLASNVQIAVKKVSHDSK-QGIKEF-VAELVSMGRLRH 400
+ F+ + IG G +G VY R L V +A+KK+ D++ +G+ + E+ + L H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKELNH 68
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILH----TNIKPCLNWYQRFRIIRGVASGL 456
N+VKL + + LV++++ + L K + T I L F++++G+A
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA--- 124
Query: 457 LYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDP 516
+ H VLHRD+KP N+L++ + KL DFGLAR + T ++V T Y P
Sbjct: 125 -FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAP 179
Query: 517 ELMRTGK-ASTSTDVYAFGVFMLEVASGR 544
E++ K ST+ D+++ G E+ + R
Sbjct: 180 EILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 108/209 (51%), Gaps = 19/209 (9%)
Query: 345 KGFKDKDVIGRGGFGKVY--RGVLASNVQIAVKKVSHDSK-QGIKEF-VAELVSMGRLRH 400
+ F+ + IG G +G VY R L V +A+KK+ D++ +G+ + E+ + L H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKELNH 68
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILH----TNIKPCLNWYQRFRIIRGVASGL 456
N+VKL + + LV++++ + L K + T I L F++++G+A
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA--- 124
Query: 457 LYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDP 516
+ H VLHRD+KP N+L++ + KL DFGLAR + T ++V T Y P
Sbjct: 125 -FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAP 179
Query: 517 ELMRTGK-ASTSTDVYAFGVFMLEVASGR 544
E++ K ST+ D+++ G E+ + R
Sbjct: 180 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 113/228 (49%), Gaps = 24/228 (10%)
Query: 353 IGRGGFGKVYRGVLASNVQ-IAVKKV-SHDSKQGIK-EFVAELVSMGRLRHRNLVKLRGY 409
IG+G FG+V++ Q +A+KKV + K+G + E+ + L+H N+V L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 410 CRRK--------GEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHE 461
CR K G LV+D+ + + + +K L+ +R +++ + +GL Y+H
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKR--VMQMLLNGLYYIHR 143
Query: 462 DWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKL---VGTFGYMDPEL 518
+ +LHRD+K ANVL+ D KL DFGLAR + Q + V T Y PEL
Sbjct: 144 N---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPEL 200
Query: 519 MRTGK-ASTSTDVYAFGVFMLEVASGRRPVEQQGSME--TVNLVDWVC 563
+ + D++ G M E+ + R P+ QG+ E + L+ +C
Sbjct: 201 LLGERDYGPPIDLWGAGCIMAEMWT-RSPI-MQGNTEQHQLALISQLC 246
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 108/209 (51%), Gaps = 19/209 (9%)
Query: 345 KGFKDKDVIGRGGFGKVY--RGVLASNVQIAVKKVSHDSK-QGIKEF-VAELVSMGRLRH 400
+ F+ + IG G +G VY R L V +A+KK+ D++ +G+ + E+ + L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILH----TNIKPCLNWYQRFRIIRGVASGL 456
N+VKL + + LV++++ + L K + T I L F++++G+A
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA--- 117
Query: 457 LYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDP 516
+ H VLHRD+KP N+L++ + KL DFGLAR + T ++V T Y P
Sbjct: 118 -FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAP 172
Query: 517 ELMRTGK-ASTSTDVYAFGVFMLEVASGR 544
E++ K ST+ D+++ G E+ + R
Sbjct: 173 EILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 108/209 (51%), Gaps = 19/209 (9%)
Query: 345 KGFKDKDVIGRGGFGKVY--RGVLASNVQIAVKKVSHDSK-QGIKEF-VAELVSMGRLRH 400
+ F+ + IG G +G VY R L V +A+KK+ D++ +G+ + E+ + L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILH----TNIKPCLNWYQRFRIIRGVASGL 456
N+VKL + + LV++++ + L K + T I L F++++G+A
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA--- 116
Query: 457 LYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDP 516
+ H VLHRD+KP N+L++ + KL DFGLAR + T ++V T Y P
Sbjct: 117 -FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAP 171
Query: 517 ELMRTGK-ASTSTDVYAFGVFMLEVASGR 544
E++ K ST+ D+++ G E+ + R
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 109/211 (51%), Gaps = 19/211 (9%)
Query: 343 ATKGFKDKDVIGRGGFGKVY--RGVLASNVQIAVKKVSHDSK-QGIKEF-VAELVSMGRL 398
+ + F+ + IG G +G VY R L V +A+KK+ D++ +G+ + E+ + L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 399 RHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILH----TNIKPCLNWYQRFRIIRGVAS 454
H N+VKL + + LV++++ + L K + T I L F++++G+A
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA- 118
Query: 455 GLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYM 514
+ H VLHRD+KP N+L++ + KL DFGLAR + T ++V T Y
Sbjct: 119 ---FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYR 171
Query: 515 DPELMRTGK-ASTSTDVYAFGVFMLEVASGR 544
PE++ K ST+ D+++ G E+ + R
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 108/209 (51%), Gaps = 19/209 (9%)
Query: 345 KGFKDKDVIGRGGFGKVY--RGVLASNVQIAVKKVSHDSK-QGIKEF-VAELVSMGRLRH 400
+ F+ + IG G +G VY R L V +A+KK+ D++ +G+ + E+ + L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILH----TNIKPCLNWYQRFRIIRGVASGL 456
N+VKL + + LV++++ + L K + T I L F++++G+A
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA--- 117
Query: 457 LYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDP 516
+ H VLHRD+KP N+L++ + KL DFGLAR + T ++V T Y P
Sbjct: 118 -FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAP 172
Query: 517 ELMRTGK-ASTSTDVYAFGVFMLEVASGR 544
E++ K ST+ D+++ G E+ + R
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 108/209 (51%), Gaps = 19/209 (9%)
Query: 345 KGFKDKDVIGRGGFGKVY--RGVLASNVQIAVKKVSHDSK-QGIKEF-VAELVSMGRLRH 400
+ F+ + IG G +G VY R L V +A+KK+ D++ +G+ + E+ + L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILH----TNIKPCLNWYQRFRIIRGVASGL 456
N+VKL + + LV++++ + L K + T I L F++++G+A
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA--- 117
Query: 457 LYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDP 516
+ H VLHRD+KP N+L++ + KL DFGLAR + T ++V T Y P
Sbjct: 118 -FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAP 172
Query: 517 ELMRTGK-ASTSTDVYAFGVFMLEVASGR 544
E++ K ST+ D+++ G E+ + R
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 108/209 (51%), Gaps = 19/209 (9%)
Query: 345 KGFKDKDVIGRGGFGKVY--RGVLASNVQIAVKKVSHDSK-QGIKEF-VAELVSMGRLRH 400
+ F+ + IG G +G VY R L V +A+KK+ D++ +G+ + E+ + L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILH----TNIKPCLNWYQRFRIIRGVASGL 456
N+VKL + + LV++++ + L K + T I L F++++G+A
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA--- 116
Query: 457 LYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDP 516
+ H VLHRD+KP N+L++ + KL DFGLAR + T ++V T Y P
Sbjct: 117 -FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAP 171
Query: 517 ELMRTGK-ASTSTDVYAFGVFMLEVASGR 544
E++ K ST+ D+++ G E+ + R
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 99/202 (49%), Gaps = 11/202 (5%)
Query: 353 IGRGGFGKVYRGVLAS----NVQIAVKKVSHDSKQGIKE-FVAELVSMGRLRHRNLVKLR 407
IG G FG V++G+ S + +A+K + + ++E F+ E ++M + H ++VKL
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 408 GYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVV 467
G + ++ + G L L K L+ +++ L YL +
Sbjct: 78 GVIT-ENPVWIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLES---KRF 132
Query: 468 LHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTS 527
+HRDI NVL+ A KLGDFGL+R + T + +K +M PE + + +++
Sbjct: 133 VHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA 192
Query: 528 TDVYAFGVFMLEV-ASGRRPVE 548
+DV+ FGV M E+ G +P +
Sbjct: 193 SDVWMFGVCMWEILMHGVKPFQ 214
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 96/194 (49%), Gaps = 10/194 (5%)
Query: 352 VIGRGGFGKVYRGVLAS----NVQIAVKKVSHDSKQGIKE-FVAELVSMGRLRHRNLVKL 406
IG G FG V++G+ S + +A+K + + ++E F+ E ++M + H ++VKL
Sbjct: 45 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 104
Query: 407 RGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQV 466
G + ++ + G L L K L+ +++ L YL +
Sbjct: 105 IGVIT-ENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLES---KR 159
Query: 467 VLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKAST 526
+HRDI NVL+ ++ KLGDFGL+R + T + +K +M PE + + ++
Sbjct: 160 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTS 219
Query: 527 STDVYAFGVFMLEV 540
++DV+ FGV M E+
Sbjct: 220 ASDVWMFGVCMWEI 233
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 113/228 (49%), Gaps = 24/228 (10%)
Query: 353 IGRGGFGKVYRGVLASNVQ-IAVKKV-SHDSKQGIK-EFVAELVSMGRLRHRNLVKLRGY 409
IG+G FG+V++ Q +A+KKV + K+G + E+ + L+H N+V L
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 410 CRRK--------GEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHE 461
CR K G LV+D+ + + + +K L+ +R +++ + +GL Y+H
Sbjct: 85 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKR--VMQMLLNGLYYIHR 142
Query: 462 DWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKL---VGTFGYMDPEL 518
+ +LHRD+K ANVL+ D KL DFGLAR + Q + V T Y PEL
Sbjct: 143 N---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPEL 199
Query: 519 MRTGK-ASTSTDVYAFGVFMLEVASGRRPVEQQGSME--TVNLVDWVC 563
+ + D++ G M E+ + R P+ QG+ E + L+ +C
Sbjct: 200 LLGERDYGPPIDLWGAGCIMAEMWT-RSPI-MQGNTEQHQLALISQLC 245
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 96/194 (49%), Gaps = 10/194 (5%)
Query: 352 VIGRGGFGKVYRGVLAS----NVQIAVKKVSHDSKQGIKE-FVAELVSMGRLRHRNLVKL 406
IG G FG V++G+ S + +A+K + + ++E F+ E ++M + H ++VKL
Sbjct: 14 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 73
Query: 407 RGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQV 466
G + ++ + G L L K L+ +++ L YL +
Sbjct: 74 IGVIT-ENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLES---KR 128
Query: 467 VLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKAST 526
+HRDI NVL+ ++ KLGDFGL+R + T + +K +M PE + + ++
Sbjct: 129 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTS 188
Query: 527 STDVYAFGVFMLEV 540
++DV+ FGV M E+
Sbjct: 189 ASDVWMFGVCMWEI 202
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 108/209 (51%), Gaps = 19/209 (9%)
Query: 345 KGFKDKDVIGRGGFGKVY--RGVLASNVQIAVKKVSHDSK-QGIKEF-VAELVSMGRLRH 400
+ F+ + IG G +G VY R L V +A+KK+ D++ +G+ + E+ + L H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKELNH 65
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILH----TNIKPCLNWYQRFRIIRGVASGL 456
N+VKL + + LV++++ + L K + T I L F++++G+A
Sbjct: 66 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA--- 121
Query: 457 LYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDP 516
+ H VLHRD+KP N+L++ + KL DFGLAR + T ++V T Y P
Sbjct: 122 -FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAP 176
Query: 517 ELMRTGK-ASTSTDVYAFGVFMLEVASGR 544
E++ K ST+ D+++ G E+ + R
Sbjct: 177 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 100/203 (49%), Gaps = 11/203 (5%)
Query: 352 VIGRGGFGKVYRGVLAS----NVQIAVKKVSHDSKQGIKE-FVAELVSMGRLRHRNLVKL 406
IG G FG V++G+ S + +A+K + + ++E F+ E ++M + H ++VKL
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 407 RGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQV 466
G + ++ + G L L K L+ +++ L YL +
Sbjct: 77 IGVIT-ENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLES---KR 131
Query: 467 VLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKAST 526
+HRDI NVL+ ++ KLGDFGL+R + T + +K +M PE + + ++
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTS 191
Query: 527 STDVYAFGVFMLEV-ASGRRPVE 548
++DV+ FGV M E+ G +P +
Sbjct: 192 ASDVWMFGVCMWEILMHGVKPFQ 214
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 96/194 (49%), Gaps = 10/194 (5%)
Query: 352 VIGRGGFGKVYRGVLAS----NVQIAVKKVSHDSKQGIKE-FVAELVSMGRLRHRNLVKL 406
IG G FG V++G+ S + +A+K + + ++E F+ E ++M + H ++VKL
Sbjct: 19 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 78
Query: 407 RGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQV 466
G + ++ + G L L K L+ +++ L YL +
Sbjct: 79 IGVIT-ENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLES---KR 133
Query: 467 VLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKAST 526
+HRDI NVL+ ++ KLGDFGL+R + T + +K +M PE + + ++
Sbjct: 134 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTS 193
Query: 527 STDVYAFGVFMLEV 540
++DV+ FGV M E+
Sbjct: 194 ASDVWMFGVCMWEI 207
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 113/228 (49%), Gaps = 24/228 (10%)
Query: 353 IGRGGFGKVYRGVLASNVQ-IAVKKV-SHDSKQGIK-EFVAELVSMGRLRHRNLVKLRGY 409
IG+G FG+V++ Q +A+KKV + K+G + E+ + L+H N+V L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 410 CRRK--------GEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHE 461
CR K G LV+D+ + + + +K L+ +R +++ + +GL Y+H
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKR--VMQMLLNGLYYIHR 143
Query: 462 DWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKL---VGTFGYMDPEL 518
+ +LHRD+K ANVL+ D KL DFGLAR + Q + V T Y PEL
Sbjct: 144 N---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPEL 200
Query: 519 MRTGK-ASTSTDVYAFGVFMLEVASGRRPVEQQGSME--TVNLVDWVC 563
+ + D++ G M E+ + R P+ QG+ E + L+ +C
Sbjct: 201 LLGERDYGPPIDLWGAGCIMAEMWT-RSPI-MQGNTEQHQLALISQLC 246
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 96/194 (49%), Gaps = 10/194 (5%)
Query: 352 VIGRGGFGKVYRGVLAS----NVQIAVKKVSHDSKQGIKE-FVAELVSMGRLRHRNLVKL 406
IG G FG V++G+ S + +A+K + + ++E F+ E ++M + H ++VKL
Sbjct: 20 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 79
Query: 407 RGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQV 466
G + ++ + G L L K L+ +++ L YL +
Sbjct: 80 IGVIT-ENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLES---KR 134
Query: 467 VLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKAST 526
+HRDI NVL+ ++ KLGDFGL+R + T + +K +M PE + + ++
Sbjct: 135 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTS 194
Query: 527 STDVYAFGVFMLEV 540
++DV+ FGV M E+
Sbjct: 195 ASDVWMFGVCMWEI 208
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 96/194 (49%), Gaps = 10/194 (5%)
Query: 352 VIGRGGFGKVYRGVLAS----NVQIAVKKVSHDSKQGIKE-FVAELVSMGRLRHRNLVKL 406
IG G FG V++G+ S + +A+K + + ++E F+ E ++M + H ++VKL
Sbjct: 22 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 81
Query: 407 RGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQV 466
G + ++ + G L L K L+ +++ L YL +
Sbjct: 82 IGVIT-ENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLES---KR 136
Query: 467 VLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKAST 526
+HRDI NVL+ ++ KLGDFGL+R + T + +K +M PE + + ++
Sbjct: 137 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTS 196
Query: 527 STDVYAFGVFMLEV 540
++DV+ FGV M E+
Sbjct: 197 ASDVWMFGVCMWEI 210
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 100/203 (49%), Gaps = 11/203 (5%)
Query: 352 VIGRGGFGKVYRGVLAS----NVQIAVKKVSHDSKQGIKE-FVAELVSMGRLRHRNLVKL 406
IG G FG V++G+ S + +A+K + + ++E F+ E ++M + H ++VKL
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 407 RGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQV 466
G + ++ + G L L K L+ +++ L YL +
Sbjct: 77 IGVIT-ENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLES---KR 131
Query: 467 VLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKAST 526
+HRDI NVL+ ++ KLGDFGL+R + T + +K +M PE + + ++
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTS 191
Query: 527 STDVYAFGVFMLEV-ASGRRPVE 548
++DV+ FGV M E+ G +P +
Sbjct: 192 ASDVWMFGVCMWEILMHGVKPFQ 214
>pdb|1BJQ|A Chain A, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1BJQ|B Chain B, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1BJQ|C Chain C, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1BJQ|D Chain D, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1BJQ|E Chain E, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1BJQ|F Chain F, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1BJQ|G Chain G, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1BJQ|H Chain H, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1LU2|A Chain A, Dolichos Biflorus Seed Lectin In Complex With The Blood
Group A Trisaccharide
pdb|1LU2|B Chain B, Dolichos Biflorus Seed Lectin In Complex With The Blood
Group A Trisaccharide
pdb|1LU1|A Chain A, The Structure Of The Dolichos Biflorus Seed Lectin In
Complex With The Forssman Disaccharide
Length = 253
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 120/257 (46%), Gaps = 45/257 (17%)
Query: 26 DVNQFIYHGFNEDAQLQRDGLASVHSNGLLQLTNT-----VSPQQEGHAFYRLPIK-FNT 79
++ F + FN + + + G A+V S+G LQLT +P G AFY PI+ ++
Sbjct: 2 NIQSFSFKNFNSPSFILQ-GDATV-SSGKLQLTKVKENGIPTPSSLGRAFYSSPIQIYDK 59
Query: 80 XXXXXXXXXXNFV----------FAIGMAFVISPSKDLGKAEASPSEYLGLFNAS--NNG 127
+F FA G+AF + P +G YLG+F++ NN
Sbjct: 60 STGAVASWATSFTVKISAPSKASFADGIAFALVP---VGSEPRRNGGYLGVFDSDVYNNS 116
Query: 128 QSTNHILAIELDTVQNLDFDDIDDNHVGIDVNSLISHESAPAAYFSDREGMNKTLELIIG 187
T +A+E DT+ N +D H+GIDVNS+ S + + +L G
Sbjct: 117 AQT---VAVEFDTLSNSGWDP-SMKHIGIDVNSIKSIATV-------------SWDLANG 159
Query: 188 DPIQIWISYDGAEKLLNVTLAPMSIPKPTKPLLSRAINLSHILLETMYVGFSASTG---S 244
+ +I I+Y+ A LL +L S + T +LS +++++ L E + VGFSA+TG
Sbjct: 160 ENAEILITYNAATSLLVASLVHPS--RRTSYILSERVDITNELPEYVSVGFSATTGLSEG 217
Query: 245 LKSSHYVLGWSFNRSGP 261
+H VL WSF P
Sbjct: 218 YIETHDVLSWSFASKLP 234
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 99/202 (49%), Gaps = 11/202 (5%)
Query: 353 IGRGGFGKVYRGVLAS----NVQIAVKKVSHDSKQGIKE-FVAELVSMGRLRHRNLVKLR 407
IG G FG V++G+ S + +A+K + + ++E F+ E ++M + H ++VKL
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 408 GYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVV 467
G + ++ + G L L K L+ +++ L YL +
Sbjct: 458 GVIT-ENPVWIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLES---KRF 512
Query: 468 LHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTS 527
+HRDI NVL+ A KLGDFGL+R + T + +K +M PE + + +++
Sbjct: 513 VHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA 572
Query: 528 TDVYAFGVFMLEV-ASGRRPVE 548
+DV+ FGV M E+ G +P +
Sbjct: 573 SDVWMFGVCMWEILMHGVKPFQ 594
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 111/216 (51%), Gaps = 18/216 (8%)
Query: 353 IGRGGFGKVY--RGVLASNVQIAVKKVSHDS--KQGIKEFVAELVSMGRLRHRNLVKLRG 408
+G G +G+V R + ++V+ A+K + S + + E+ + L H N++KL
Sbjct: 45 LGSGAYGEVLLCRDKV-THVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYD 103
Query: 409 YCRRKGEFLLVYDYMPNGSL-DKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVV 467
+ K + LV + G L D+I+H + N II+ V SG+ YLH+ +
Sbjct: 104 FFEDKRNYYLVMECYKGGELFDEIIH---RMKFNEVDAAVIIKQVLSGVTYLHK---HNI 157
Query: 468 LHRDIKPANVLLDA---DLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKA 524
+HRD+KP N+LL++ D K+ DFGL+ ++++ + + +GT Y+ PE++R K
Sbjct: 158 VHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ--KKMKERLGTAYYIAPEVLRK-KY 214
Query: 525 STSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVD 560
DV++ GV + + +G P Q E + V+
Sbjct: 215 DEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVE 250
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 102/209 (48%), Gaps = 13/209 (6%)
Query: 339 DLYKATKGFKDKDVIGRGGFGKVYRGVLASNVQI-AVKKVS----HDSKQGI-KEFVAEL 392
D+ K ++ D +G G F VY+ + QI A+KK+ ++K GI + + E+
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREI 63
Query: 393 VSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGV 452
+ L H N++ L K LV+D+M L+ I+ N + + ++ +
Sbjct: 64 KLLQELSHPNIIGLLDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHIKAYMLMTL 122
Query: 453 ASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFG 512
GL YLH+ W +LHRD+KP N+LLD + KL DFGLA+ + ++V T
Sbjct: 123 -QGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV-TRW 177
Query: 513 YMDPELMRTGKA-STSTDVYAFGVFMLEV 540
Y PEL+ + D++A G + E+
Sbjct: 178 YRAPELLFGARMYGVGVDMWAVGCILAEL 206
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 107/212 (50%), Gaps = 21/212 (9%)
Query: 343 ATKGFKDKDVIGRGGFGKVY--RGVLASNVQIAVKKVSHDSK-QGIKEF-VAELVSMGRL 398
+ + F+ + IG G +G VY R L V +A+KK+ D++ +G+ + E+ + L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 399 RHRNLVKLRGYCRRKGEFLLVYDYMP---NGSLDKILHTNIKPCLNWYQRFRIIRGVASG 455
H N+VKL + + LV++++ +D T I L F++++G+A
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLA-- 120
Query: 456 LLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKL--VGTFGY 513
+ H VLHRD+KP N+L++ + KL DFGLAR + +P T V T Y
Sbjct: 121 --FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG---VPVRTYXHEVVTLWY 172
Query: 514 MDPELMRTGK-ASTSTDVYAFGVFMLEVASGR 544
PE++ K ST+ D+++ G E+ + R
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 109/213 (51%), Gaps = 23/213 (10%)
Query: 343 ATKGFKDKDVIGRGGFGKVY--RGVLASNVQIAVKKVSHDSK-QGIKEF-VAELVSMGRL 398
+ + F+ + IG G +G VY R L V +A+KK+ D++ +G+ + E+ + L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 399 RHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILH----TNIKPCLNWYQRFRIIRGVAS 454
H N+VKL + + LV++++ + L K + T I L F++++G+A
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA- 117
Query: 455 GLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKL--VGTFG 512
+ H VLHRD+KP N+L++ + KL DFGLAR + +P T V T
Sbjct: 118 ---FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG---VPVRTYXHEVVTLW 168
Query: 513 YMDPELMRTGK-ASTSTDVYAFGVFMLEVASGR 544
Y PE++ K ST+ D+++ G E+ + R
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 107/212 (50%), Gaps = 21/212 (9%)
Query: 343 ATKGFKDKDVIGRGGFGKVY--RGVLASNVQIAVKKVSHDSK-QGIKEF-VAELVSMGRL 398
+ + F+ + IG G +G VY R L V +A+KK+ D++ +G+ + E+ + L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 399 RHRNLVKLRGYCRRKGEFLLVYDYMP---NGSLDKILHTNIKPCLNWYQRFRIIRGVASG 455
H N+VKL + + LV++++ +D T I L F++++G+A
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLA-- 120
Query: 456 LLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKL--VGTFGY 513
+ H VLHRD+KP N+L++ + KL DFGLAR + +P T V T Y
Sbjct: 121 --FCHS---HRVLHRDLKPENLLINTEGAIKLADFGLARAFG---VPVRTYXHEVVTLWY 172
Query: 514 MDPELMRTGK-ASTSTDVYAFGVFMLEVASGR 544
PE++ K ST+ D+++ G E+ + R
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 107/212 (50%), Gaps = 21/212 (9%)
Query: 343 ATKGFKDKDVIGRGGFGKVY--RGVLASNVQIAVKKVSHDSK-QGIKEF-VAELVSMGRL 398
+ + F+ + IG G +G VY R L V +A+KK+ D++ +G+ + E+ + L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 399 RHRNLVKLRGYCRRKGEFLLVYDYMP---NGSLDKILHTNIKPCLNWYQRFRIIRGVASG 455
H N+VKL + + LV++++ +D T I L F++++G+A
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLA-- 118
Query: 456 LLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKL--VGTFGY 513
+ H VLHRD+KP N+L++ + KL DFGLAR + +P T V T Y
Sbjct: 119 --FCHS---HRVLHRDLKPENLLINTEGAIKLADFGLARAFG---VPVRTYXHEVVTLWY 170
Query: 514 MDPELMRTGK-ASTSTDVYAFGVFMLEVASGR 544
PE++ K ST+ D+++ G E+ + R
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 104/206 (50%), Gaps = 14/206 (6%)
Query: 351 DVIGRGGFGKVYRGVLA-SNVQIAVKKVSHD---SKQGIKEFVAELVSMGRLRHRNLVKL 406
D +G G FGKV G + ++AVK ++ S + + E+ ++ RH +++KL
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 407 RGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQV 466
+F +V +Y+ G L + + + + + R+ + + S + Y H +
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYICKHGR--VEEMEARRLFQQILSAVDYCHR---HM 131
Query: 467 VLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGK--A 524
V+HRD+KP NVLLDA +N K+ DFGL+ + +T+ G+ Y PE++ +G+ A
Sbjct: 132 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS--CGSPNYAAPEVI-SGRLYA 188
Query: 525 STSTDVYAFGVFMLEVASGRRPVEQQ 550
D+++ GV + + G P + +
Sbjct: 189 GPEVDIWSCGVILYALLCGTLPFDDE 214
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 100/202 (49%), Gaps = 11/202 (5%)
Query: 353 IGRGGFGKVYRGVLAS----NVQIAVKKVSHDSKQGIKE-FVAELVSMGRLRHRNLVKLR 407
IG G FG V++G+ S + +A+K + + ++E F+ E ++M + H ++VKL
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 408 GYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVV 467
G + ++ + G L L K L+ +++ L YL +
Sbjct: 458 GVIT-ENPVWIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLES---KRF 512
Query: 468 LHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTS 527
+HRDI NVL+ ++ KLGDFGL+R + T + +K +M PE + + +++
Sbjct: 513 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSA 572
Query: 528 TDVYAFGVFMLEV-ASGRRPVE 548
+DV+ FGV M E+ G +P +
Sbjct: 573 SDVWMFGVCMWEILMHGVKPFQ 594
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 108/217 (49%), Gaps = 31/217 (14%)
Query: 343 ATKGFKDKDVIGRGGFGKVY--RGVLASNVQIAVKKVSHDSK-QGIKEF-VAELVSMGRL 398
+ + F+ + IG G +G VY R L V +A+KK+ D++ +G+ + E+ + L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 399 RHRNLVKLRGYCRRKGEFLLVY--------DYMPNGSLDKILHTNIKPCLNWYQRFRIIR 450
H N+VKL + + LV+ D+M +L I IK L F++++
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYL-----FQLLQ 114
Query: 451 GVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKL--V 508
G+A + H VLHRD+KP N+L++ + KL DFGLAR + +P T V
Sbjct: 115 GLA----FCHS---HRVLHRDLKPENLLINTEGAIKLADFGLARAFG---VPVRTYXHEV 164
Query: 509 GTFGYMDPELMRTGK-ASTSTDVYAFGVFMLEVASGR 544
T Y PE++ K ST+ D+++ G E+ + R
Sbjct: 165 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 109/213 (51%), Gaps = 23/213 (10%)
Query: 343 ATKGFKDKDVIGRGGFGKVY--RGVLASNVQIAVKKVSHDSK-QGIKEF-VAELVSMGRL 398
+ + F+ + IG G +G VY R L V +A+KK+ D++ +G+ + E+ + L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 399 RHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILH----TNIKPCLNWYQRFRIIRGVAS 454
H N+VKL + + LV++++ + L K + T I L F++++G+A
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA- 117
Query: 455 GLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKL--VGTFG 512
+ H VLHRD+KP N+L++ + KL DFGLAR + +P T V T
Sbjct: 118 ---FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG---VPVRTYXHEVVTLW 168
Query: 513 YMDPELMRTGK-ASTSTDVYAFGVFMLEVASGR 544
Y PE++ K ST+ D+++ G E+ + R
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 109/213 (51%), Gaps = 23/213 (10%)
Query: 343 ATKGFKDKDVIGRGGFGKVY--RGVLASNVQIAVKKVSHDSK-QGIKEF-VAELVSMGRL 398
+ + F+ + IG G +G VY R L V +A+KK+ D++ +G+ + E+ + L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 399 RHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILH----TNIKPCLNWYQRFRIIRGVAS 454
H N+VKL + + LV++++ + L K + T I L F++++G+A
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA- 117
Query: 455 GLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKL--VGTFG 512
+ H VLHRD+KP N+L++ + KL DFGLAR + +P T V T
Sbjct: 118 ---FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG---VPVRTYXHEVVTLW 168
Query: 513 YMDPELMRTGK-ASTSTDVYAFGVFMLEVASGR 544
Y PE++ K ST+ D+++ G E+ + R
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 107/212 (50%), Gaps = 21/212 (9%)
Query: 343 ATKGFKDKDVIGRGGFGKVY--RGVLASNVQIAVKKVSHDSK-QGIKEF-VAELVSMGRL 398
+ + F+ + IG G +G VY R L V +A+KK+ D++ +G+ + E+ + L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 399 RHRNLVKLRGYCRRKGEFLLVYDYMP---NGSLDKILHTNIKPCLNWYQRFRIIRGVASG 455
H N+VKL + + LV++++ +D T I L F++++G+A
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLA-- 119
Query: 456 LLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKL--VGTFGY 513
+ H VLHRD+KP N+L++ + KL DFGLAR + +P T V T Y
Sbjct: 120 --FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG---VPVRTYXHEVVTLWY 171
Query: 514 MDPELMRTGK-ASTSTDVYAFGVFMLEVASGR 544
PE++ K ST+ D+++ G E+ + R
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 109/213 (51%), Gaps = 23/213 (10%)
Query: 343 ATKGFKDKDVIGRGGFGKVY--RGVLASNVQIAVKKVSHDSK-QGIKEF-VAELVSMGRL 398
+ + F+ + IG G +G VY R L V +A+KK+ D++ +G+ + E+ + L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 399 RHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILH----TNIKPCLNWYQRFRIIRGVAS 454
H N+VKL + + LV++++ + L K + T I L F++++G+A
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA- 117
Query: 455 GLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKL--VGTFG 512
+ H VLHRD+KP N+L++ + KL DFGLAR + +P T V T
Sbjct: 118 ---FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG---VPVRTYXHEVVTLW 168
Query: 513 YMDPELMRTGK-ASTSTDVYAFGVFMLEVASGR 544
Y PE++ K ST+ D+++ G E+ + R
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 108/211 (51%), Gaps = 23/211 (10%)
Query: 345 KGFKDKDVIGRGGFGKVY--RGVLASNVQIAVKKVSHDSK-QGIKEF-VAELVSMGRLRH 400
+ F+ + IG G +G VY R L V +A+KK+ D++ +G+ + E+ + L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILH----TNIKPCLNWYQRFRIIRGVASGL 456
N+VKL + + LV++++ + L K + T I L F++++G+A
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA--- 116
Query: 457 LYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKL--VGTFGYM 514
+ H VLHRD+KP N+L++ + KL DFGLAR + +P T V T Y
Sbjct: 117 -FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG---VPVRTYXHEVVTLWYR 169
Query: 515 DPELMRTGK-ASTSTDVYAFGVFMLEVASGR 544
PE++ K ST+ D+++ G E+ + R
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 109/213 (51%), Gaps = 23/213 (10%)
Query: 343 ATKGFKDKDVIGRGGFGKVY--RGVLASNVQIAVKKVSHDSK-QGIKEF-VAELVSMGRL 398
+ + F+ + IG G +G VY R L V +A+KK+ D++ +G+ + E+ + L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 399 RHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILH----TNIKPCLNWYQRFRIIRGVAS 454
H N+VKL + + LV++++ + L K + T I L F++++G+A
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA- 118
Query: 455 GLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKL--VGTFG 512
+ H VLHRD+KP N+L++ + KL DFGLAR + +P T V T
Sbjct: 119 ---FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG---VPVRTYXHEVVTLW 169
Query: 513 YMDPELMRTGK-ASTSTDVYAFGVFMLEVASGR 544
Y PE++ K ST+ D+++ G E+ + R
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 109/213 (51%), Gaps = 23/213 (10%)
Query: 343 ATKGFKDKDVIGRGGFGKVY--RGVLASNVQIAVKKVSHDSK-QGIKEF-VAELVSMGRL 398
+ + F+ + IG G +G VY R L V +A+KK+ D++ +G+ + E+ + L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 399 RHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILH----TNIKPCLNWYQRFRIIRGVAS 454
H N+VKL + + LV++++ + L K + T I L F++++G+A
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA- 120
Query: 455 GLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKL--VGTFG 512
+ H VLHRD+KP N+L++ + KL DFGLAR + +P T V T
Sbjct: 121 ---FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG---VPVRTYXHEVVTLW 171
Query: 513 YMDPELMRTGK-ASTSTDVYAFGVFMLEVASGR 544
Y PE++ K ST+ D+++ G E+ + R
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 109/213 (51%), Gaps = 23/213 (10%)
Query: 343 ATKGFKDKDVIGRGGFGKVY--RGVLASNVQIAVKKVSHDSK-QGIKEF-VAELVSMGRL 398
+ + F+ + IG G +G VY R L V +A+KK+ D++ +G+ + E+ + L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 399 RHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILH----TNIKPCLNWYQRFRIIRGVAS 454
H N+VKL + + LV++++ + L K + T I L F++++G+A
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA- 119
Query: 455 GLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKL--VGTFG 512
+ H VLHRD+KP N+L++ + KL DFGLAR + +P T V T
Sbjct: 120 ---FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG---VPVRTYXHEVVTLW 170
Query: 513 YMDPELMRTGK-ASTSTDVYAFGVFMLEVASGR 544
Y PE++ K ST+ D+++ G E+ + R
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 109/213 (51%), Gaps = 23/213 (10%)
Query: 343 ATKGFKDKDVIGRGGFGKVY--RGVLASNVQIAVKKVSHDSK-QGIKEF-VAELVSMGRL 398
+ + F+ + IG G +G VY R L V +A+KK+ D++ +G+ + E+ + L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 399 RHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILH----TNIKPCLNWYQRFRIIRGVAS 454
H N+VKL + + LV++++ + L K + T I L F++++G+A
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA- 119
Query: 455 GLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKL--VGTFG 512
+ H VLHRD+KP N+L++ + KL DFGLAR + +P T V T
Sbjct: 120 ---FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG---VPVRTYXHEVVTLW 170
Query: 513 YMDPELMRTGK-ASTSTDVYAFGVFMLEVASGR 544
Y PE++ K ST+ D+++ G E+ + R
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 109/213 (51%), Gaps = 23/213 (10%)
Query: 343 ATKGFKDKDVIGRGGFGKVY--RGVLASNVQIAVKKVSHDSK-QGIKEF-VAELVSMGRL 398
+ + F+ + IG G +G VY R L V +A+KK+ D++ +G+ + E+ + L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 399 RHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILH----TNIKPCLNWYQRFRIIRGVAS 454
H N+VKL + + LV++++ + L K + T I L F++++G+A
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA- 119
Query: 455 GLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKL--VGTFG 512
+ H VLHRD+KP N+L++ + KL DFGLAR + +P T V T
Sbjct: 120 ---FCHS---HRVLHRDLKPENLLINTEGAIKLADFGLARAFG---VPVRTYXHEVVTLW 170
Query: 513 YMDPELMRTGK-ASTSTDVYAFGVFMLEVASGR 544
Y PE++ K ST+ D+++ G E+ + R
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 108/211 (51%), Gaps = 23/211 (10%)
Query: 345 KGFKDKDVIGRGGFGKVY--RGVLASNVQIAVKKVSHDSK-QGIKEF-VAELVSMGRLRH 400
+ F+ + IG G +G VY R L V +A+KK+ D++ +G+ + E+ + L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILH----TNIKPCLNWYQRFRIIRGVASGL 456
N+VKL + + LV++++ + L K + T I L F++++G+A
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA--- 116
Query: 457 LYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKL--VGTFGYM 514
+ H VLHRD+KP N+L++ + KL DFGLAR + +P T V T Y
Sbjct: 117 -FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG---VPVRTYXHEVVTLWYR 169
Query: 515 DPELMRTGK-ASTSTDVYAFGVFMLEVASGR 544
PE++ K ST+ D+++ G E+ + R
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 109/213 (51%), Gaps = 23/213 (10%)
Query: 343 ATKGFKDKDVIGRGGFGKVY--RGVLASNVQIAVKKVSHDSK-QGIKEF-VAELVSMGRL 398
+ + F+ + IG G +G VY R L V +A+KK+ D++ +G+ + E+ + L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 399 RHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILH----TNIKPCLNWYQRFRIIRGVAS 454
H N+VKL + + LV++++ + L K + T I L F++++G+A
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA- 118
Query: 455 GLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKL--VGTFG 512
+ H VLHRD+KP N+L++ + KL DFGLAR + +P T V T
Sbjct: 119 ---FCHS---HRVLHRDLKPENLLINTEGAIKLADFGLARAFG---VPVRTYXHEVVTLW 169
Query: 513 YMDPELMRTGK-ASTSTDVYAFGVFMLEVASGR 544
Y PE++ K ST+ D+++ G E+ + R
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 109/213 (51%), Gaps = 23/213 (10%)
Query: 343 ATKGFKDKDVIGRGGFGKVY--RGVLASNVQIAVKKVSHDSK-QGIKEF-VAELVSMGRL 398
+ + F+ + IG G +G VY R L V +A+KK+ D++ +G+ + E+ + L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 399 RHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILH----TNIKPCLNWYQRFRIIRGVAS 454
H N+VKL + + LV++++ + L K + T I L F++++G+A
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA- 120
Query: 455 GLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKL--VGTFG 512
+ H VLHRD+KP N+L++ + KL DFGLAR + +P T V T
Sbjct: 121 ---FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG---VPVRTYXHEVVTLW 171
Query: 513 YMDPELMRTGK-ASTSTDVYAFGVFMLEVASGR 544
Y PE++ K ST+ D+++ G E+ + R
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 108/211 (51%), Gaps = 23/211 (10%)
Query: 345 KGFKDKDVIGRGGFGKVY--RGVLASNVQIAVKKVSHDSK-QGIKEF-VAELVSMGRLRH 400
+ F+ + IG G +G VY R L V +A+KK+ D++ +G+ + E+ + L H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILH----TNIKPCLNWYQRFRIIRGVASGL 456
N+VKL + + LV++++ + L K + T I L F++++G+A
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA--- 118
Query: 457 LYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKL--VGTFGYM 514
+ H VLHRD+KP N+L++ + KL DFGLAR + +P T V T Y
Sbjct: 119 -FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG---VPVRTYXHEVVTLWYR 171
Query: 515 DPELMRTGK-ASTSTDVYAFGVFMLEVASGR 544
PE++ K ST+ D+++ G E+ + R
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 133/296 (44%), Gaps = 46/296 (15%)
Query: 341 YKATKGFKDKDVIGRGGFGKVYRGVLASNVQI-AVKKV--SHDSKQGIKEFVAELVSMGR 397
+++ + +++ ++G G +G V + +I A+KK S D K K + E+ + +
Sbjct: 21 FQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQ 80
Query: 398 LRHRNLVKLRGYCRRKGEFLLVYDYMPNGSLD--KILHTNIKPCLNWYQRFRIIRGVASG 455
LRH NLV L C++K + LV++++ + LD ++ + + F+II G+ G
Sbjct: 81 LRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGI--G 138
Query: 456 LLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR-------LYDHDTIPQTTKLV 508
+ H ++HRDIKP N+L+ KL DFG AR +YD + V
Sbjct: 139 FCHSHN-----IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDE--------V 185
Query: 509 GTFGYMDPELMRTG-KASTSTDVYAFGVFMLEVASGRRPVEQQGSMETV--------NLV 559
T Y PEL+ K + DV+A G + E+ G ++ + NL+
Sbjct: 186 ATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLI 245
Query: 560 DWVCDCWKKGAIRDASDSRLEGICEEKQM--------ELVLKLGLFCSHPKPEARP 607
+ + K + + RL I E + + E+V+ L C H P+ RP
Sbjct: 246 PRHQELFNKNPV--FAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRP 299
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 108/209 (51%), Gaps = 19/209 (9%)
Query: 345 KGFKDKDVIGRGGFGKVY--RGVLASNVQIAVKKVSHDSK-QGIKEF-VAELVSMGRLRH 400
+ F+ + IG G +G VY R L V +A+KK+ D++ +G+ + E+ + L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILH----TNIKPCLNWYQRFRIIRGVASGL 456
N+VKL + + LV++++ + L K + T I L F++++G++
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLS--- 117
Query: 457 LYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDP 516
+ H VLHRD+KP N+L++ + KL DFGLAR + T ++V T Y P
Sbjct: 118 -FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAP 172
Query: 517 ELMRTGK-ASTSTDVYAFGVFMLEVASGR 544
E++ K ST+ D+++ G E+ + R
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1LUL|A Chain A, Db58, A Legume Lectin From Dolichos Biflorus
pdb|1LUL|B Chain B, Db58, A Legume Lectin From Dolichos Biflorus
pdb|1LUL|C Chain C, Db58, A Legume Lectin From Dolichos Biflorus
pdb|1LUL|D Chain D, Db58, A Legume Lectin From Dolichos Biflorus
pdb|1LUL|E Chain E, Db58, A Legume Lectin From Dolichos Biflorus
pdb|1LUL|F Chain F, Db58, A Legume Lectin From Dolichos Biflorus
pdb|1G7Y|A Chain A, The Crystal Structure Of The 58kd Vegetative Lectin From
The Tropical Legume Dolichos Biflorus
pdb|1G7Y|B Chain B, The Crystal Structure Of The 58kd Vegetative Lectin From
The Tropical Legume Dolichos Biflorus
pdb|1G7Y|C Chain C, The Crystal Structure Of The 58kd Vegetative Lectin From
The Tropical Legume Dolichos Biflorus
pdb|1G7Y|D Chain D, The Crystal Structure Of The 58kd Vegetative Lectin From
The Tropical Legume Dolichos Biflorus
pdb|1G7Y|E Chain E, The Crystal Structure Of The 58kd Vegetative Lectin From
The Tropical Legume Dolichos Biflorus
pdb|1G7Y|F Chain F, The Crystal Structure Of The 58kd Vegetative Lectin From
The Tropical Legume Dolichos Biflorus
Length = 253
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 116/259 (44%), Gaps = 49/259 (18%)
Query: 26 DVNQFIYHGFNEDA-QLQRDG--------LASVHSNGLLQLTNTVSPQQEGHAFYRLPIK 76
D+ F + FN + LQ D L V NGL L++ G AFY PI+
Sbjct: 2 DIQSFSFKNFNSSSFILQGDATVSSSKLRLTKVKGNGLPTLSSL------GRAFYSSPIQ 55
Query: 77 -FNTXXXXXXXXXXNFVFAI----------GMAFVISPSKDLGKAEASPSEYLGLFNASN 125
++ +F I G+AF + P +G S S +LG+F+ S+
Sbjct: 56 IYDKSTGAVASWATSFTANIFAPNKSSSADGIAFALVP---VGSEPKSNSGFLGVFD-SD 111
Query: 126 NGQSTNHILAIELDTVQNLDFDDIDDNHVGIDVNSLISHESAPAAYFSDREGMNKTLELI 185
++ +A+E DT N D+D H+GIDVNS+ S +A + L
Sbjct: 112 VYDNSAQTVAVEFDTFSNTDWDPTS-RHIGIDVNSIKSIRTA-------------SWGLA 157
Query: 186 IGDPIQIWISYDGAEKLLNVTLAPMSIPKPTKPLLSRAINLSHILLETMYVGFSASTG-- 243
G +I I+Y+ A LL +L S + T ++S +++++ L E + +GFSA+TG
Sbjct: 158 NGQNAEILITYNAATSLLVASLVHPS--RRTSYIVSERVDITNELPEYVSIGFSATTGLS 215
Query: 244 -SLKSSHYVLGWSFNRSGP 261
+H VL WSF P
Sbjct: 216 EGYTETHDVLSWSFASKLP 234
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 109/213 (51%), Gaps = 23/213 (10%)
Query: 343 ATKGFKDKDVIGRGGFGKVY--RGVLASNVQIAVKKVSHDSK-QGIKEF-VAELVSMGRL 398
+ + F+ + IG G +G VY R L V +A+KK+ D++ +G+ + E+ + L
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKEL 63
Query: 399 RHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILH----TNIKPCLNWYQRFRIIRGVAS 454
H N+VKL + + LV++++ + L K + T I L F++++G+A
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA- 121
Query: 455 GLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKL--VGTFG 512
+ H VLHRD+KP N+L++ + KL DFGLAR + +P T V T
Sbjct: 122 ---FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG---VPVRTYXHEVVTLW 172
Query: 513 YMDPELMRTGK-ASTSTDVYAFGVFMLEVASGR 544
Y PE++ K ST+ D+++ G E+ + R
Sbjct: 173 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 107/212 (50%), Gaps = 21/212 (9%)
Query: 343 ATKGFKDKDVIGRGGFGKVY--RGVLASNVQIAVKKVSHDSK-QGIKEF-VAELVSMGRL 398
+ + F+ + IG G +G VY R L V +A+KK+ D++ +G+ + E+ + L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 399 RHRNLVKLRGYCRRKGEFLLVYDYMPN---GSLDKILHTNIKPCLNWYQRFRIIRGVASG 455
H N+VKL + + LV++++ +D T I L F++++G+A
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLA-- 120
Query: 456 LLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKL--VGTFGY 513
+ H VLHRD+KP N+L++ + KL DFGLAR + +P T V T Y
Sbjct: 121 --FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG---VPVRTYXHEVVTLWY 172
Query: 514 MDPELMRTGK-ASTSTDVYAFGVFMLEVASGR 544
PE++ K ST+ D+++ G E+ + R
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 106/208 (50%), Gaps = 17/208 (8%)
Query: 345 KGFKDKDVIGRGGFGKVY--RGVLASNVQIAVKKVSHDSK-QGIKEF-VAELVSMGRLRH 400
+ F+ + IG G +G VY R L V +A+KK+ D++ +G+ + E+ + L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPN---GSLDKILHTNIKPCLNWYQRFRIIRGVASGLL 457
N+VKL + + LV++++ +D T I L F++++G+A
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLA---- 116
Query: 458 YLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPE 517
+ H VLHRD+KP N+L++ + KL DFGLAR + T ++V T Y PE
Sbjct: 117 FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPE 172
Query: 518 LMRTGK-ASTSTDVYAFGVFMLEVASGR 544
++ K ST+ D+++ G E+ + R
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 350 KDVIGRGGFGKVYRGVLASNVQ----IAVKKVSHDSKQGIK-EFVAELVSMGRLRHRNLV 404
+DV+G G F +V +LA + + +A+K ++ ++ +G + E+ + +++H N+V
Sbjct: 23 RDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 405 KLRGYCRRKGEFLLVYDYMPNGSL-DKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDW 463
L G L+ + G L D+I+ K R+I V + YLH+
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVE---KGFYTERDASRLIFQVLDAVKYLHD-- 134
Query: 464 EQVVLHRDIKPANVL---LDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMR 520
++HRD+KP N+L LD D + DFGL+++ D ++ T GT GY+ PE++
Sbjct: 135 -LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA--CGTPGYVAPEVLA 191
Query: 521 TGKASTSTDVYAFGVFMLEVASGRRP 546
S + D ++ GV + G P
Sbjct: 192 QKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 100/213 (46%), Gaps = 28/213 (13%)
Query: 353 IGRGGFGKVY--------RGVLASNVQIAVKKVSHD-SKQGIKEFVAELVSMGRL-RHRN 402
+G G FG+V + V +AVK + D +++ + + V+E+ M + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNW-YQRFRIIR----------- 450
++ L G C + G ++ +Y G+L + L P + + Y R+
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 451 --GVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDHDTIPQTTKL 507
+A G+ YL Q +HRD+ NVL+ + K+ DFGLAR + + D +TT
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 508 VGTFGYMDPELMRTGKASTSTDVYAFGVFMLEV 540
+M PE + + +DV++FGV M E+
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3ZVX|A Chain A, Structure Of The Lectin From Platypodium Elegans In
Complex With A Trimannoside
pdb|3ZVX|B Chain B, Structure Of The Lectin From Platypodium Elegans In
Complex With A Trimannoside
pdb|3ZYR|A Chain A, Structure Of The Lectin From Platypodium Elegans In
Complex With Heptasaccharide
pdb|3ZYR|B Chain B, Structure Of The Lectin From Platypodium Elegans In
Complex With Heptasaccharide
Length = 261
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 86/166 (51%), Gaps = 20/166 (12%)
Query: 94 AIGMAFVISPSKDLGKAEASPSEYLGLFNASNN-GQSTNHILAIELDT--VQNLDFDDID 150
A G+AF I+P D S LGLFN +S N +LA+E DT QN + D +
Sbjct: 94 ADGIAFFIAP-PDTTIPSGSAGGLLGLFNPRTALNESANQVLAVEFDTFFAQNSNTWDPN 152
Query: 151 DNHVGIDVNSLISHESAPAAYFSDREGMNKTLELIIGDPIQIWISYDGAEKLLNVTLAPM 210
H+GIDVNS+ S+ + REG KTL +++ +Y+ + + ++V
Sbjct: 153 YQHIGIDVNSI---RSSKVVRWERREG--KTLNVLV--------TYNPSTRTIDVV---A 196
Query: 211 SIPKPTKPLLSRAINLSHILLETMYVGFSASTGSLKSSHYVLGWSF 256
+ P + LS ++L+ IL E + VGFSA++G +H + WSF
Sbjct: 197 TYPDGQRYQLSHVVDLTTILPEWVRVGFSAASGEQFQTHNLESWSF 242
>pdb|1AVB|A Chain A, Arcelin-1 From Phaseolus Vulgaris L
pdb|1AVB|B Chain B, Arcelin-1 From Phaseolus Vulgaris L
Length = 226
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 107/244 (43%), Gaps = 43/244 (17%)
Query: 29 QFIYHGFNEDAQLQRDGLASVHSNGLLQLTNTVSPQQE--GHAFYRLPIKFNTXXXXXXX 86
F FN+ L G A+V S G L LTN +++ G AFY PI+ N
Sbjct: 5 SFNVETFNK-TNLILQGDATVSSEGHLLLTNVKGNEEDSMGRAFYSAPIQINDRTIDNLA 63
Query: 87 X-XXNFVFAI----------GMAFVISPSKDLGKAEASPSEYLGLFNASNNGQSTNHILA 135
NF F I G+AF + P +G YLGLFN +N + H +A
Sbjct: 64 SFSTNFTFRINAKNIENSAYGLAFALVP---VGSRPKLKGRYLGLFNTTNYDRDA-HTVA 119
Query: 136 IELDTVQNLDFDDIDDNHVGIDVNSLISHESAPAAYFSDREGMNKTLELIIGDPIQIWIS 195
+ DTV N + IDVNS+ P A S G N G+ ++ I+
Sbjct: 120 VVFDTVS---------NRIEIDVNSI-----RPIATESCNFGHNN------GEKAEVRIT 159
Query: 196 YDGAEKLLNVTLAPMSIPKPTKPLLSRAINLSHILLETMYVGFSASTGSLK---SSHYVL 252
YD + L V+L S + K +S + L + + + VGFSA++GS K +H VL
Sbjct: 160 YDSPKNDLRVSLLYPSSEE--KCHVSATVPLEKEVEDWVSVGFSATSGSKKETTETHNVL 217
Query: 253 GWSF 256
WSF
Sbjct: 218 SWSF 221
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 350 KDVIGRGGFGKVYRGVLASNVQ----IAVKKVSHDSKQGIK-EFVAELVSMGRLRHRNLV 404
+DV+G G F +V +LA + + +A+K ++ ++ +G + E+ + +++H N+V
Sbjct: 23 RDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 405 KLRGYCRRKGEFLLVYDYMPNGSL-DKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDW 463
L G L+ + G L D+I+ K R+I V + YLH+
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVE---KGFYTERDASRLIFQVLDAVKYLHD-- 134
Query: 464 EQVVLHRDIKPANVL---LDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMR 520
++HRD+KP N+L LD D + DFGL+++ D ++ T GT GY+ PE++
Sbjct: 135 -LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA--CGTPGYVAPEVLA 191
Query: 521 TGKASTSTDVYAFGVFMLEVASGRRP 546
S + D ++ GV + G P
Sbjct: 192 QKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 99/216 (45%), Gaps = 34/216 (15%)
Query: 353 IGRGGFGKVYRGVLASNV-----------QIAVKKVSHD-SKQGIKEFVAELVSMGRL-R 399
+G G FG+V VLA + ++AVK + D +++ + + ++E+ M + +
Sbjct: 25 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 81
Query: 400 HRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQR-------------- 445
H+N++ L G C + G ++ +Y G+L + L P L +
Sbjct: 82 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 141
Query: 446 FRIIRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDH-DTIPQT 504
VA G+ YL + +HRD+ NVL+ D K+ DFGLAR H D +T
Sbjct: 142 VSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 198
Query: 505 TKLVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEV 540
T +M PE + + +DV++FGV + E+
Sbjct: 199 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 234
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 99/216 (45%), Gaps = 34/216 (15%)
Query: 353 IGRGGFGKVYRGVLASNV-----------QIAVKKVSHD-SKQGIKEFVAELVSMGRL-R 399
+G G FG+V VLA + ++AVK + D +++ + + ++E+ M + +
Sbjct: 29 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 85
Query: 400 HRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQR-------------- 445
H+N++ L G C + G ++ +Y G+L + L P L +
Sbjct: 86 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 145
Query: 446 FRIIRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDH-DTIPQT 504
VA G+ YL + +HRD+ NVL+ D K+ DFGLAR H D +T
Sbjct: 146 VSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 202
Query: 505 TKLVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEV 540
T +M PE + + +DV++FGV + E+
Sbjct: 203 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 238
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 129/301 (42%), Gaps = 38/301 (12%)
Query: 322 VYEDWEREYGPQRFTYKDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHD 380
V++ W ++Y PQ K + + + +G G FG V+R A+ A K V
Sbjct: 136 VFDIW-KQYYPQPVEIKHDH-VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP 193
Query: 381 SKQGIKEFVAELVSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSL-DKILHTNIKPC 439
+ + E+ +M LRH LV L E +++Y++M G L +K+ + K
Sbjct: 194 HESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK-- 251
Query: 440 LNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNG--KLGDFGL-ARLY 496
++ + +R V GL ++HE+ +H D+KP N++ + KL DFGL A L
Sbjct: 252 MSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD 308
Query: 497 DHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMET- 555
++ TT GT + PE+ TD+++ GV + SG P + ET
Sbjct: 309 PKQSVKVTT---GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETL 365
Query: 556 --VNLVDWVCDCWKKGAIRDASDSRLEGICEEKQMELVLKLGLFCSHPKPEARPNMRQVM 613
V DW D DS GI E+ + + + KL L A PN R +
Sbjct: 366 RNVKSCDWNMD-----------DSAFSGISEDGK-DFIRKLLL--------ADPNTRMTI 405
Query: 614 Q 614
Sbjct: 406 H 406
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 99/197 (50%), Gaps = 16/197 (8%)
Query: 353 IGRGGFGKVYRGV-LASNVQIAVKKV--SHDSKQGIKEFVAELVSMGRLRHRNLVKLRGY 409
+G G +G+VY+ + +N +A+K++ H+ + + E+ + L+HRN+++L+
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSV 101
Query: 410 CRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLH 469
L+++Y N L K + N + + F + + +G+ + H + LH
Sbjct: 102 IHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSF--LYQLINGVNFCH---SRRCLH 155
Query: 470 RDIKPANVLL---DADLNG--KLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKA 524
RD+KP N+LL DA K+GDFGLAR + I Q T + T Y PE++ +
Sbjct: 156 RDLKPQNLLLSVSDASETPVLKIGDFGLARAFG-IPIRQFTHEIITLWYRPPEILLGSRH 214
Query: 525 -STSTDVYAFGVFMLEV 540
STS D+++ E+
Sbjct: 215 YSTSVDIWSIACIWAEM 231
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 130/301 (43%), Gaps = 38/301 (12%)
Query: 322 VYEDWEREYGPQRFTYKDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHD 380
V++ W ++Y PQ K + + + +G G FG V+R A+ A K V
Sbjct: 30 VFDIW-KQYYPQPVEIKHDH-VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP 87
Query: 381 SKQGIKEFVAELVSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSL-DKILHTNIKPC 439
+ + E+ +M LRH LV L E +++Y++M G L +K+ + K
Sbjct: 88 HESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK-- 145
Query: 440 LNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNG--KLGDFGL-ARLY 496
++ + +R V GL ++HE+ +H D+KP N++ + KL DFGL A L
Sbjct: 146 MSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD 202
Query: 497 DHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETV 556
++ TT GT + PE+ TD+++ GV + SG P + ET+
Sbjct: 203 PKQSVKVTT---GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETL 259
Query: 557 NLV---DWVCDCWKKGAIRDASDSRLEGICEEKQMELVLKLGLFCSHPKPEARPNMRQVM 613
V DW D DS GI E+ + + + KL L A PN R +
Sbjct: 260 RNVKSCDWNMD-----------DSAFSGISEDGK-DFIRKLLL--------ADPNTRMTI 299
Query: 614 Q 614
Sbjct: 300 H 300
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 99/216 (45%), Gaps = 34/216 (15%)
Query: 353 IGRGGFGKVYRGVLASNV-----------QIAVKKVSHD-SKQGIKEFVAELVSMGRL-R 399
+G G FG+V VLA + ++AVK + D +++ + + ++E+ M + +
Sbjct: 36 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 400 HRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNW--------------YQR 445
H+N++ L G C + G ++ +Y G+L + L P L +
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDL 152
Query: 446 FRIIRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDH-DTIPQT 504
VA G+ YL + +HRD+ NVL+ D K+ DFGLAR H D +T
Sbjct: 153 VSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKT 209
Query: 505 TKLVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEV 540
T +M PE + + +DV++FGV + E+
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 99/216 (45%), Gaps = 34/216 (15%)
Query: 353 IGRGGFGKVYRGVLASNV-----------QIAVKKVSHD-SKQGIKEFVAELVSMGRL-R 399
+G G FG+V VLA + ++AVK + D +++ + + ++E+ M + +
Sbjct: 28 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 84
Query: 400 HRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQR-------------- 445
H+N++ L G C + G ++ +Y G+L + L P L +
Sbjct: 85 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 144
Query: 446 FRIIRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDH-DTIPQT 504
VA G+ YL + +HRD+ NVL+ D K+ DFGLAR H D +T
Sbjct: 145 VSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 201
Query: 505 TKLVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEV 540
T +M PE + + +DV++FGV + E+
Sbjct: 202 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 237
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 107/209 (51%), Gaps = 19/209 (9%)
Query: 345 KGFKDKDVIGRGGFGKVY--RGVLASNVQIAVKKVSHDSK-QGIKEF-VAELVSMGRLRH 400
+ F+ + IG G +G VY R L V +A+ K+ D++ +G+ + E+ + L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEV-VALXKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILH----TNIKPCLNWYQRFRIIRGVASGL 456
N+VKL + + LV++++ + L K + T I L F++++G+A
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA--- 117
Query: 457 LYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDP 516
+ H VLHRD+KP N+L++ + KL DFGLAR + T ++V T Y P
Sbjct: 118 -FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAP 172
Query: 517 ELMRTGK-ASTSTDVYAFGVFMLEVASGR 544
E++ K ST+ D+++ G E+ + R
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 107/209 (51%), Gaps = 19/209 (9%)
Query: 345 KGFKDKDVIGRGGFGKVY--RGVLASNVQIAVKKVSHDSK-QGIKEF-VAELVSMGRLRH 400
+ F+ + IG G +G VY R L V +A+ K+ D++ +G+ + E+ + L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEV-VALXKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILH----TNIKPCLNWYQRFRIIRGVASGL 456
N+VKL + + LV++++ + L K + T I L F++++G+A
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA--- 116
Query: 457 LYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDP 516
+ H VLHRD+KP N+L++ + KL DFGLAR + T ++V T Y P
Sbjct: 117 -FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAP 171
Query: 517 ELMRTGK-ASTSTDVYAFGVFMLEVASGR 544
E++ K ST+ D+++ G E+ + R
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 99/216 (45%), Gaps = 34/216 (15%)
Query: 353 IGRGGFGKVYRGVLASNV-----------QIAVKKVSHD-SKQGIKEFVAELVSMGRL-R 399
+G G FG+V VLA + ++AVK + D +++ + + ++E+ M + +
Sbjct: 21 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 77
Query: 400 HRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQR-------------- 445
H+N++ L G C + G ++ +Y G+L + L P L +
Sbjct: 78 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 137
Query: 446 FRIIRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDH-DTIPQT 504
VA G+ YL + +HRD+ NVL+ D K+ DFGLAR H D +T
Sbjct: 138 VSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 194
Query: 505 TKLVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEV 540
T +M PE + + +DV++FGV + E+
Sbjct: 195 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 230
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 99/216 (45%), Gaps = 34/216 (15%)
Query: 353 IGRGGFGKVYRGVLASNV-----------QIAVKKVSHD-SKQGIKEFVAELVSMGRL-R 399
+G G FG+V VLA + ++AVK + D +++ + + ++E+ M + +
Sbjct: 36 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 400 HRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQR-------------- 445
H+N++ L G C + G ++ +Y G+L + L P L +
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 446 FRIIRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDH-DTIPQT 504
VA G+ YL + +HRD+ NVL+ D K+ DFGLAR H D +T
Sbjct: 153 VSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 505 TKLVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEV 540
T +M PE + + +DV++FGV + E+
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 109/213 (51%), Gaps = 23/213 (10%)
Query: 343 ATKGFKDKDVIGRGGFGKVY--RGVLASNVQIAVKKVSHDSK-QGIKEF-VAELVSMGRL 398
+ + F+ + IG G +G VY R L V +A+KK+ D++ +G+ + E+ + L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEV-VALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 399 RHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILH----TNIKPCLNWYQRFRIIRGVAS 454
H N+VKL + + LV++++ + L K + T I L F++++G+A
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEHV-DQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA- 120
Query: 455 GLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKL--VGTFG 512
+ H VLHRD+KP N+L++ + KL DFGLAR + +P T V T
Sbjct: 121 ---FCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFG---VPVRTYXHEVVTLW 171
Query: 513 YMDPELMRTGK-ASTSTDVYAFGVFMLEVASGR 544
Y PE++ K ST+ D+++ G E+ + R
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 99/216 (45%), Gaps = 34/216 (15%)
Query: 353 IGRGGFGKVYRGVLASNV-----------QIAVKKVSHD-SKQGIKEFVAELVSMGRL-R 399
+G G FG+V VLA + ++AVK + D +++ + + ++E+ M + +
Sbjct: 36 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 400 HRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQR-------------- 445
H+N++ L G C + G ++ +Y G+L + L P L +
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 446 FRIIRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDH-DTIPQT 504
VA G+ YL + +HRD+ NVL+ D K+ DFGLAR H D +T
Sbjct: 153 VSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 505 TKLVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEV 540
T +M PE + + +DV++FGV + E+
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 99/216 (45%), Gaps = 34/216 (15%)
Query: 353 IGRGGFGKVYRGVLASNV-----------QIAVKKVSHD-SKQGIKEFVAELVSMGRL-R 399
+G G FG+V VLA + ++AVK + D +++ + + ++E+ M + +
Sbjct: 36 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 400 HRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQR-------------- 445
H+N++ L G C + G ++ +Y G+L + L P L +
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 152
Query: 446 FRIIRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDH-DTIPQT 504
VA G+ YL + +HRD+ NVL+ D K+ DFGLAR H D +T
Sbjct: 153 VSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 505 TKLVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEV 540
T +M PE + + +DV++FGV + E+
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 350 KDVIGRGGFGKVYRGVLASNVQ----IAVKKVSHDSKQGIK-EFVAELVSMGRLRHRNLV 404
+DV+G G F +V +LA + + +A+K ++ ++ +G + E+ + +++H N+V
Sbjct: 23 RDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 405 KLRGYCRRKGEFLLVYDYMPNGSL-DKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDW 463
L G L+ + G L D+I+ K R+I V + YLH+
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVE---KGFYTERDASRLIFQVLDAVKYLHD-- 134
Query: 464 EQVVLHRDIKPANVL---LDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMR 520
++HRD+KP N+L LD D + DFGL+++ D ++ T GT GY+ PE++
Sbjct: 135 -LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA--CGTPGYVAPEVLA 191
Query: 521 TGKASTSTDVYAFGVFMLEVASGRRP 546
S + D ++ GV + G P
Sbjct: 192 QKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 112/228 (49%), Gaps = 24/228 (10%)
Query: 353 IGRGGFGKVYRGVLASNVQ-IAVKKV-SHDSKQGIK-EFVAELVSMGRLRHRNLVKLRGY 409
IG+G FG+V++ Q +A+KKV + K+G + E+ + L+H N+V L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 410 CRRKGE--------FLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHE 461
CR K LV+D+ + + + +K L+ +R +++ + +GL Y+H
Sbjct: 86 CRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKR--VMQMLLNGLYYIHR 143
Query: 462 DWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKL---VGTFGYMDPEL 518
+ +LHRD+K ANVL+ D KL DFGLAR + Q + V T Y PEL
Sbjct: 144 N---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPEL 200
Query: 519 MRTGK-ASTSTDVYAFGVFMLEVASGRRPVEQQGSME--TVNLVDWVC 563
+ + D++ G M E+ + R P+ QG+ E + L+ +C
Sbjct: 201 LLGERDYGPPIDLWGAGCIMAEMWT-RSPI-MQGNTEQHQLALISQLC 246
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 99/216 (45%), Gaps = 34/216 (15%)
Query: 353 IGRGGFGKVYRGVLASNV-----------QIAVKKVSHD-SKQGIKEFVAELVSMGRL-R 399
+G G FG+V VLA + ++AVK + D +++ + + ++E+ M + +
Sbjct: 77 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 133
Query: 400 HRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQR-------------- 445
H+N++ L G C + G ++ +Y G+L + L P L +
Sbjct: 134 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 193
Query: 446 FRIIRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDH-DTIPQT 504
VA G+ YL + +HRD+ NVL+ D K+ DFGLAR H D +T
Sbjct: 194 VSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 250
Query: 505 TKLVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEV 540
T +M PE + + +DV++FGV + E+
Sbjct: 251 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 286
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 96/211 (45%), Gaps = 19/211 (9%)
Query: 352 VIGRGGFGKVY--RGVLASNVQIAVKKV--SHDSKQGIKEFVAELVSMGRLRHRNLVKLR 407
IG+G F KV R +L ++AVK + + + +++ E+ M L H N+VKL
Sbjct: 14 TIGKGNFAKVKLARHILTGK-EVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 72
Query: 408 GYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRI---IRGVASGLLYLHEDWE 464
+ LV +Y G + L + W + R + S + Y H+ +
Sbjct: 73 EVIETEKTLYLVMEYASGGEVFDYLVAH-----GWMKEKEARAKFRQIVSAVQYCHQKF- 126
Query: 465 QVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKA 524
++HRD+K N+LLDAD+N K+ DFG + + T G+ Y PEL + K
Sbjct: 127 --IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT--FCGSPPYAAPELFQGKKY 182
Query: 525 S-TSTDVYAFGVFMLEVASGRRPVEQQGSME 554
DV++ GV + + SG P + Q E
Sbjct: 183 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKE 213
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 98/210 (46%), Gaps = 17/210 (8%)
Query: 352 VIGRGGFGKVY--RGVLASNVQIAVKKV--SHDSKQGIKEFVAELVSMGRLRHRNLVKLR 407
IG+G F KV R +L ++AVK + + + +++ E+ M L H N+VKL
Sbjct: 21 TIGKGNFAKVKLARHILTGK-EVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 408 GYCRRKGEFLLVYDYMPNGSLDKIL--HTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQ 465
+ LV +Y G + L H +K +FR I S + Y H+ +
Sbjct: 80 EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK-EARAKFRQI---VSAVQYCHQKF-- 133
Query: 466 VVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKAS 525
++HRD+K N+LLDAD+N K+ DFG + + T G+ Y PEL + K
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT--FCGSPPYAAPELFQGKKYD 190
Query: 526 -TSTDVYAFGVFMLEVASGRRPVEQQGSME 554
DV++ GV + + SG P + Q E
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKE 220
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 97/210 (46%), Gaps = 17/210 (8%)
Query: 352 VIGRGGFGKVY--RGVLASNVQIAVKKV--SHDSKQGIKEFVAELVSMGRLRHRNLVKLR 407
IG+G F KV R +L ++AVK + + + +++ E+ M L H N+VKL
Sbjct: 21 TIGKGNFAKVKLARHILTGK-EVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 408 GYCRRKGEFLLVYDYMPNGSLDKIL--HTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQ 465
+ LV +Y G + L H +K + R + S + Y H+ +
Sbjct: 80 EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK----EARAKFRQIVSAVQYCHQKF-- 133
Query: 466 VVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKAS 525
++HRD+K N+LLDAD+N K+ DFG + + T G+ Y PEL + K
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT--FCGSPPYAAPELFQGKKYD 190
Query: 526 -TSTDVYAFGVFMLEVASGRRPVEQQGSME 554
DV++ GV + + SG P + Q E
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKE 220
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 100/213 (46%), Gaps = 28/213 (13%)
Query: 353 IGRGGFGKVY--------RGVLASNVQIAVKKVSHD-SKQGIKEFVAELVSMGRL-RHRN 402
+G G FG+V + V +AVK + D +++ + + V+E+ M + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNW-YQRFRI------------- 448
++ L G C + G ++ +Y G+L + L P + + Y R+
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 449 IRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDHDTIPQTTKL 507
+A G+ YL Q +HRD+ NVL+ + K+ DFGLAR + + D +TT
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 508 VGTFGYMDPELMRTGKASTSTDVYAFGVFMLEV 540
+M PE + + +DV++FGV M E+
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 101/211 (47%), Gaps = 25/211 (11%)
Query: 351 DVIGRGGFGKVYRGVLASNVQ----IAVKKVSHDSKQGIK---EFVAELVSMGRLRHRNL 403
+++G GG +V+ LA +++ +AVK + D + F E + L H +
Sbjct: 18 EILGFGGMSEVH---LARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAI 74
Query: 404 VKLRGYCRRKGEF------LLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLL 457
V + Y + E +V +Y+ +L I+HT + + + +I L
Sbjct: 75 VAV--YATGEAETPAGPLPYIVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADACQALN 130
Query: 458 YLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLY--DHDTIPQTTKLVGTFGYMD 515
+ H++ ++HRD+KPAN+++ A K+ DFG+AR +++ QT ++GT Y+
Sbjct: 131 FSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLS 187
Query: 516 PELMRTGKASTSTDVYAFGVFMLEVASGRRP 546
PE R +DVY+ G + EV +G P
Sbjct: 188 PEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 97/216 (44%), Gaps = 33/216 (15%)
Query: 346 GFKDKDVIGRGGFGKVYRGVLA-SNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLV 404
+ D VIG G FG VY+ L S +A+KKV D + +E L M +L H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 76
Query: 405 KLRGYCRRKGE------FLLVYDYMPNGSLDKILHTN--------IKPCLNWYQRFRIIR 450
+LR + GE LV DY+P H + I L YQ FR
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR--- 133
Query: 451 GVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNG-KLGDFGLARLYDHDTIPQTTKLVG 509
L Y+H + HRDIKP N+LLD D KL DFG A+ P + +
Sbjct: 134 ----SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PNVSXICS 185
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
+ Y PEL+ TS+ DV++ G + E+ G+
Sbjct: 186 RY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 97/216 (44%), Gaps = 33/216 (15%)
Query: 346 GFKDKDVIGRGGFGKVYRGVLA-SNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLV 404
+ D VIG G FG VY+ L S +A+KKV D + +E L M +L H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 76
Query: 405 KLRGYCRRKGE------FLLVYDYMPNGSLDKILHTN--------IKPCLNWYQRFRIIR 450
+LR + GE LV DY+P H + I L YQ FR
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR--- 133
Query: 451 GVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNG-KLGDFGLARLYDHDTIPQTTKLVG 509
L Y+H + HRDIKP N+LLD D KL DFG A+ P + +
Sbjct: 134 ----SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PNVSXICS 185
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
+ Y PEL+ TS+ DV++ G + E+ G+
Sbjct: 186 RY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2BQP|A Chain A, The Structure Of The Pea Lectin-D-Glucopyranose Complex
pdb|2BQP|B Chain B, The Structure Of The Pea Lectin-D-Glucopyranose Complex
Length = 234
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 112/249 (44%), Gaps = 39/249 (15%)
Query: 26 DVNQFIYHGFNEDAQ---LQRDGLASVHSNGLLQLTNTVSPQQEGHAFYRLPI------- 75
+ F+ F+ D Q Q DG + L LT V G A Y PI
Sbjct: 2 ETTSFLITKFSPDQQNLIFQGDGYTTKEK---LTLTKAVK-NTVGRALYSSPIHIWDRET 57
Query: 76 ----KFNTXXXXXXXXXXNFVFAIGMAFVISPSKDLGKAEASPSEYLGLFNASNNGQSTN 131
F T ++ A G F I+P + + YLG+FN++ ++T
Sbjct: 58 GNVANFVTSFTFVINAPNSYNVADGFTFFIAP---VDTKPQTGGGYLGVFNSAEYDKTT- 113
Query: 132 HILAIELDTVQNLDFDDID-DNHVGIDVNSLISHESAPAAYFSDREGMNKTLELIIGDPI 190
+A+E DT N +D + D H+GIDVNS+ S + K+ +L G+
Sbjct: 114 QTVAVEFDTFYNAAWDPSNRDRHIGIDVNSIKSVNT-------------KSWKLQNGEEA 160
Query: 191 QIWISYDGAEKLLNVTLA-PMSI--PKPTKPLLSRAINLSHILLETMYVGFSASTGSLKS 247
+ I+++ A +L V+L P + + T LS ++L ++ E + +GFSA+TG+ +
Sbjct: 161 NVVIAFNAATNVLTVSLTYPNNSLEEEVTSYTLSDVVSLKDVVPEWVRIGFSATTGAEYA 220
Query: 248 SHYVLGWSF 256
+H VL WSF
Sbjct: 221 AHEVLSWSF 229
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 97/216 (44%), Gaps = 33/216 (15%)
Query: 346 GFKDKDVIGRGGFGKVYRGVLA-SNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLV 404
+ D VIG G FG VY+ L S +A+KKV D + +E L M +L H N+V
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 110
Query: 405 KLRGYCRRKGE------FLLVYDYMPNGSLDKILHTN--------IKPCLNWYQRFRIIR 450
+LR + GE LV DY+P H + I L YQ FR
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR--- 167
Query: 451 GVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNG-KLGDFGLARLYDHDTIPQTTKLVG 509
L Y+H + HRDIKP N+LLD D KL DFG A+ P + +
Sbjct: 168 ----SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PNVSXICS 219
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
+ Y PEL+ TS+ DV++ G + E+ G+
Sbjct: 220 RY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 97/216 (44%), Gaps = 33/216 (15%)
Query: 346 GFKDKDVIGRGGFGKVYRGVLA-SNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLV 404
+ D VIG G FG VY+ L S +A+KKV D + +E L M +L H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 76
Query: 405 KLRGYCRRKGE------FLLVYDYMPNGSLDKILHTN--------IKPCLNWYQRFRIIR 450
+LR + GE LV DY+P H + I L YQ FR
Sbjct: 77 RLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR--- 133
Query: 451 GVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNG-KLGDFGLARLYDHDTIPQTTKLVG 509
L Y+H + HRDIKP N+LLD D KL DFG A+ P + +
Sbjct: 134 ----SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PNVSXICS 185
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
+ Y PEL+ TS+ DV++ G + E+ G+
Sbjct: 186 RY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 97/216 (44%), Gaps = 33/216 (15%)
Query: 346 GFKDKDVIGRGGFGKVYRGVLA-SNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLV 404
+ D VIG G FG VY+ L S +A+KKV D + +E L M +L H N+V
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 77
Query: 405 KLRGYCRRKGE------FLLVYDYMPNGSLDKILHTN--------IKPCLNWYQRFRIIR 450
+LR + GE LV DY+P H + I L YQ FR
Sbjct: 78 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR--- 134
Query: 451 GVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNG-KLGDFGLARLYDHDTIPQTTKLVG 509
L Y+H + HRDIKP N+LLD D KL DFG A+ P + +
Sbjct: 135 ----SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PNVSXICS 186
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
+ Y PEL+ TS+ DV++ G + E+ G+
Sbjct: 187 RY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 69/131 (52%), Gaps = 7/131 (5%)
Query: 418 LVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDIKPANV 477
+V +Y+ +L I+HT + + + +I L + H++ ++HRD+KPAN+
Sbjct: 93 IVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANI 147
Query: 478 LLDADLNGKLGDFGLARLY--DHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDVYAFGV 535
L+ A K+ DFG+AR +++ QT ++GT Y+ PE R +DVY+ G
Sbjct: 148 LISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGC 207
Query: 536 FMLEVASGRRP 546
+ EV +G P
Sbjct: 208 VLYEVLTGEPP 218
>pdb|2SBA|A Chain A, Soybean Agglutinin Complexed With 2,6-Pentasaccharide
pdb|1G9F|A Chain A, Crystal Structure Of The Soybean Agglutinin In A Complex
With A Biantennary Blood Group Antigen Analog
pdb|1SBD|A Chain A, Soybean Agglutinin Complexed With 2,4-pentasaccharide
pdb|1SBE|A Chain A, Soybean Agglutinin From Glycine Max
pdb|1SBF|A Chain A, Soybean Agglutinin
Length = 253
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 104/235 (44%), Gaps = 41/235 (17%)
Query: 45 GLASVHSNGLLQLTN-----TVSPQQEGHAFYRLPIKF---NTXXXXXXXXXXNFVF--- 93
G A V S+G LQL T P G A Y PI T NF F
Sbjct: 22 GDAIVTSSGKLQLNKVDENGTPKPSSLGRALYSTPIHIWDKETGSVASFAASFNFTFYAP 81
Query: 94 -----AIGMAFVISPSKDLGKAEASPSEYLGLFNASNNGQSTNHILAIELDTVQNLDFDD 148
A G+AF ++P + A YLGLFN + +G + ++A+E DT +N D
Sbjct: 82 DTKRLADGLAFFLAPIDTKPQTHAG---YLGLFNENESG---DQVVAVEFDTFRNS--WD 133
Query: 149 IDDNHVGIDVNSLISHESAPAAYFSDREGMNKTLELIIGDPIQIWISYDGAEKLLNVTLA 208
+ H+GI+VNS+ R + +L ++ I+YD + LL +L
Sbjct: 134 PPNPHIGINVNSI-------------RSIKTTSWDLANNKVAKVLITYDASTSLLVASLV 180
Query: 209 PMSIPKPTKPLLSRAINLSHILLETMYVGFSASTG--SLKSSHYVLGWSFNRSGP 261
S + T +LS ++L L E + +GFSA+TG SH VL WSF + P
Sbjct: 181 YPS--QRTSNILSDVVDLKTSLPEWVRIGFSAATGLDIPGESHDVLSWSFASNLP 233
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 97/216 (44%), Gaps = 33/216 (15%)
Query: 346 GFKDKDVIGRGGFGKVYRGVLA-SNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLV 404
+ D VIG G FG VY+ L S +A+KKV D + +E L M +L H N+V
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 88
Query: 405 KLRGYCRRKGE------FLLVYDYMPNGSLDKILHTN--------IKPCLNWYQRFRIIR 450
+LR + GE LV DY+P H + I L YQ FR
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR--- 145
Query: 451 GVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNG-KLGDFGLARLYDHDTIPQTTKLVG 509
L Y+H + HRDIKP N+LLD D KL DFG A+ P + +
Sbjct: 146 ----SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PNVSXICS 197
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
+ Y PEL+ TS+ DV++ G + E+ G+
Sbjct: 198 RY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 97/216 (44%), Gaps = 33/216 (15%)
Query: 346 GFKDKDVIGRGGFGKVYRGVLA-SNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLV 404
+ D VIG G FG VY+ L S +A+KKV D + +E L M +L H N+V
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 95
Query: 405 KLRGYCRRKGE------FLLVYDYMPNGSLDKILHTN--------IKPCLNWYQRFRIIR 450
+LR + GE LV DY+P H + I L YQ FR
Sbjct: 96 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR--- 152
Query: 451 GVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNG-KLGDFGLARLYDHDTIPQTTKLVG 509
L Y+H + HRDIKP N+LLD D KL DFG A+ P + +
Sbjct: 153 ----SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PNVSXICS 204
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
+ Y PEL+ TS+ DV++ G + E+ G+
Sbjct: 205 RY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 28/206 (13%)
Query: 353 IGRGGFGKVYRGVL-----ASNVQIAVKKVSHDSKQGIKE-FVAELVSMGRLRHRNLVKL 406
+G G FGKV + +AVK + ++ + E+ + L H ++VK
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 407 RGYCRRKGE--FLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWE 464
+G C +GE LV +Y+P GSL L + C+ Q + + G+ YLH
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYLPRH---CVGLAQLLLFAQQICEGMAYLHA--- 130
Query: 465 QVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLV--------GTFGYMDP 516
Q +HR + NVLLD D K+GDFGLA+ +P+ + F Y P
Sbjct: 131 QHYIHRALAARNVLLDNDRLVKIGDFGLAK-----AVPEGHEYYRVREDGDSPVFWYA-P 184
Query: 517 ELMRTGKASTSTDVYAFGVFMLEVAS 542
E ++ K ++DV++FGV + E+ +
Sbjct: 185 ECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 97/216 (44%), Gaps = 33/216 (15%)
Query: 346 GFKDKDVIGRGGFGKVYRGVLA-SNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLV 404
+ D VIG G FG VY+ L S +A+KKV D + +E L M +L H N+V
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 84
Query: 405 KLRGYCRRKGE------FLLVYDYMPNGSLDKILHTN--------IKPCLNWYQRFRIIR 450
+LR + GE LV DY+P H + I L YQ FR
Sbjct: 85 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR--- 141
Query: 451 GVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNG-KLGDFGLARLYDHDTIPQTTKLVG 509
L Y+H + HRDIKP N+LLD D KL DFG A+ P + +
Sbjct: 142 ----SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PNVSXICS 193
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
+ Y PEL+ TS+ DV++ G + E+ G+
Sbjct: 194 RY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 103/206 (50%), Gaps = 14/206 (6%)
Query: 351 DVIGRGGFGKVYRGVLA-SNVQIAVKKVSHD---SKQGIKEFVAELVSMGRLRHRNLVKL 406
D +G G FGKV G + ++AVK ++ S + + E+ ++ RH +++KL
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 407 RGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQV 466
+F +V +Y+ G L + + + + + R+ + + S + Y H +
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYICKHGR--VEEMEARRLFQQILSAVDYCHR---HM 131
Query: 467 VLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGK--A 524
V+HRD+KP NVLLDA +N K+ DFGL+ + + + G+ Y PE++ +G+ A
Sbjct: 132 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDS--CGSPNYAAPEVI-SGRLYA 188
Query: 525 STSTDVYAFGVFMLEVASGRRPVEQQ 550
D+++ GV + + G P + +
Sbjct: 189 GPEVDIWSCGVILYALLCGTLPFDDE 214
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 97/216 (44%), Gaps = 33/216 (15%)
Query: 346 GFKDKDVIGRGGFGKVYRGVLA-SNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLV 404
+ D VIG G FG VY+ L S +A+KKV D + +E L M +L H N+V
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 88
Query: 405 KLRGYCRRKGE------FLLVYDYMPNGSLDKILHTN--------IKPCLNWYQRFRIIR 450
+LR + GE LV DY+P H + I L YQ FR
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR--- 145
Query: 451 GVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNG-KLGDFGLARLYDHDTIPQTTKLVG 509
L Y+H + HRDIKP N+LLD D KL DFG A+ P + +
Sbjct: 146 ----SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PNVSXICS 197
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
+ Y PEL+ TS+ DV++ G + E+ G+
Sbjct: 198 RY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 100/213 (46%), Gaps = 28/213 (13%)
Query: 353 IGRGGFGKVY--------RGVLASNVQIAVKKVSHD-SKQGIKEFVAELVSMGRL-RHRN 402
+G G FG+V + V +AVK + D +++ + + V+E+ M + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNW-YQRFRI------------- 448
++ L G C + G ++ +Y G+L + L P + + Y R+
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 449 IRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDHDTIPQTTKL 507
+A G+ YL Q +HRD+ NVL+ + K+ DFGLAR + + D +TT
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 508 VGTFGYMDPELMRTGKASTSTDVYAFGVFMLEV 540
+M PE + + +DV++FGV M E+
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 98/216 (45%), Gaps = 33/216 (15%)
Query: 346 GFKDKDVIGRGGFGKVYRGVLASNVQ-IAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLV 404
+ D VIG G FG VY+ L + + +A+KKV D + +E L M +L H N+V
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 104
Query: 405 KLRGYCRRKGE------FLLVYDYMPNGSLDKILHTN--------IKPCLNWYQRFRIIR 450
+LR + GE LV DY+P H + I L YQ FR
Sbjct: 105 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR--- 161
Query: 451 GVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNG-KLGDFGLARLYDHDTIPQTTKLVG 509
L Y+H + HRDIKP N+LLD D KL DFG A+ P + +
Sbjct: 162 ----SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PNVSYICS 213
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
+ Y PEL+ TS+ DV++ G + E+ G+
Sbjct: 214 RY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 28/206 (13%)
Query: 353 IGRGGFGKVYRGVL-----ASNVQIAVKKVSHDSKQGIKE-FVAELVSMGRLRHRNLVKL 406
+G G FGKV + +AVK + ++ + E+ + L H ++VK
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 407 RGYCRRKGE--FLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWE 464
+G C +GE LV +Y+P GSL L + C+ Q + + G+ YLH
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYLPRH---CVGLAQLLLFAQQICEGMAYLHA--- 129
Query: 465 QVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLV--------GTFGYMDP 516
Q +HR + NVLLD D K+GDFGLA+ +P+ + F Y P
Sbjct: 130 QHYIHRALAARNVLLDNDRLVKIGDFGLAK-----AVPEGHEYYRVREDGDSPVFWYA-P 183
Query: 517 ELMRTGKASTSTDVYAFGVFMLEVAS 542
E ++ K ++DV++FGV + E+ +
Sbjct: 184 ECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 99/207 (47%), Gaps = 21/207 (10%)
Query: 353 IGRGGFGKVYRGVL----ASNVQIAVKKVSHD---SKQGIKEFVAELVSMGRLRHRNLVK 405
+G G FG V RG V +AVK + D + + +F+ E+ +M L HRNL++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 406 LRGYCRRKGEFLLVYDYMPNGSL-DKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWE 464
L G +V + P GSL D++ L R+ + VA G+ YL
Sbjct: 76 LYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLES--- 129
Query: 465 QVVLHRDIKPANVLLDADLNGKLGDFGLARLY----DHDTIPQTTKLVGTFGYMDPELMR 520
+ +HRD+ N+LL K+GDFGL R DH + + K+ F + PE ++
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV--PFAWCAPESLK 187
Query: 521 TGKASTSTDVYAFGVFMLEVAS-GRRP 546
T S ++D + FGV + E+ + G+ P
Sbjct: 188 TRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 99/207 (47%), Gaps = 21/207 (10%)
Query: 353 IGRGGFGKVYRGVL----ASNVQIAVKKVSHD---SKQGIKEFVAELVSMGRLRHRNLVK 405
+G G FG V RG V +AVK + D + + +F+ E+ +M L HRNL++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 406 LRGYCRRKGEFLLVYDYMPNGSL-DKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWE 464
L G +V + P GSL D++ L R+ + VA G+ YL
Sbjct: 86 LYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLES--- 139
Query: 465 QVVLHRDIKPANVLLDADLNGKLGDFGLARLY----DHDTIPQTTKLVGTFGYMDPELMR 520
+ +HRD+ N+LL K+GDFGL R DH + + K+ F + PE ++
Sbjct: 140 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV--PFAWCAPESLK 197
Query: 521 TGKASTSTDVYAFGVFMLEVAS-GRRP 546
T S ++D + FGV + E+ + G+ P
Sbjct: 198 TRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 97/216 (44%), Gaps = 33/216 (15%)
Query: 346 GFKDKDVIGRGGFGKVYRGVLA-SNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLV 404
+ D VIG G FG VY+ L S +A+KKV D + +E L M +L H N+V
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 80
Query: 405 KLRGYCRRKGE------FLLVYDYMPNGSLDKILHTN--------IKPCLNWYQRFRIIR 450
+LR + GE LV DY+P H + I L YQ FR
Sbjct: 81 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR--- 137
Query: 451 GVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNG-KLGDFGLARLYDHDTIPQTTKLVG 509
L Y+H + HRDIKP N+LLD D KL DFG A+ P + +
Sbjct: 138 ----SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PNVSXICS 189
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
+ Y PEL+ TS+ DV++ G + E+ G+
Sbjct: 190 RY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 98/221 (44%), Gaps = 12/221 (5%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGVLASNVQIAVKKVSHDSKQG--IKEFVAELVSM 395
KD + K ++ + IG GGF KV ++ K+ + G + E+ ++
Sbjct: 3 KDYDELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEAL 62
Query: 396 GRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSL-DKILHTNIKPCLNWYQRFRIIRGVAS 454
LRH+++ +L + +V +Y P G L D I+ + L+ + + R + S
Sbjct: 63 KNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDR---LSEEETRVVFRQIVS 119
Query: 455 GLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYM 514
+ Y+H Q HRD+KP N+L D KL DFGL + G+ Y
Sbjct: 120 AVAYVHS---QGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYA 176
Query: 515 DPELMRTGKA--STSTDVYAFGVFMLEVASGRRPVEQQGSM 553
PEL++ GK+ + DV++ G+ + + G P + M
Sbjct: 177 APELIQ-GKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVM 216
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 100/213 (46%), Gaps = 28/213 (13%)
Query: 353 IGRGGFGKVY--------RGVLASNVQIAVKKVSHD-SKQGIKEFVAELVSMGRL-RHRN 402
+G G FG+V + V +AVK + D +++ + + V+E+ M + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNW-YQRFRI------------- 448
++ L G C + G ++ +Y G+L + L P + + Y R+
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 449 IRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDHDTIPQTTKL 507
+A G+ YL Q +HRD+ NVL+ + K+ DFGLAR + + D +TT
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 508 VGTFGYMDPELMRTGKASTSTDVYAFGVFMLEV 540
+M PE + + +DV++FGV M E+
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 108/234 (46%), Gaps = 28/234 (11%)
Query: 345 KGFKDKDVIGRGGFGKVYRGVLASNV-QIAVKKV--------SHDSKQGIKEFVAELVSM 395
+ ++ K+++GRG V R + + AVK + S + Q ++E A L +
Sbjct: 4 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELRE--ATLKEV 61
Query: 396 GRLR----HRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRG 451
LR H N+++L+ F LV+D M G L L + L+ + +I+R
Sbjct: 62 DILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT--LSEKETRKIMRA 119
Query: 452 VASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTF 511
+ + LH+ ++HRD+KP N+LLD D+N KL DFG + D + ++ GT
Sbjct: 120 LLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE--KLREVCGTP 174
Query: 512 GYMDPELMRTGKAST------STDVYAFGVFMLEVASGRRPVEQQGSMETVNLV 559
Y+ PE++ D+++ GV M + +G P + M + ++
Sbjct: 175 SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMI 228
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 351 DVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGIK---EFVAELVSMGRLRHRNLVKL 406
+++G GG +V+ L + +AVK + D + F E + L H +V +
Sbjct: 18 EILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 407 --RGYCRRKGEFL--LVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHED 462
G L +V +Y+ +L I+HT + + + +I L + H++
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADACQALNFSHQN 135
Query: 463 WEQVVLHRDIKPANVLLDADLNGKLGDFGLARLY--DHDTIPQTTKLVGTFGYMDPELMR 520
++HRD+KPAN+++ A K+ DFG+AR +++ QT ++GT Y+ PE R
Sbjct: 136 G---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 192
Query: 521 TGKASTSTDVYAFGVFMLEVASGRRP 546
+DVY+ G + EV +G P
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 97/216 (44%), Gaps = 33/216 (15%)
Query: 346 GFKDKDVIGRGGFGKVYRGVLA-SNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLV 404
+ D VIG G FG VY+ L S +A+KKV D + +E L M +L H N+V
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 81
Query: 405 KLRGYCRRKGE------FLLVYDYMPNGSLDKILHTN--------IKPCLNWYQRFRIIR 450
+LR + GE LV DY+P H + I L YQ FR
Sbjct: 82 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR--- 138
Query: 451 GVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNG-KLGDFGLARLYDHDTIPQTTKLVG 509
L Y+H + HRDIKP N+LLD D KL DFG A+ P + +
Sbjct: 139 ----SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PNVSYICS 190
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
+ Y PEL+ TS+ DV++ G + E+ G+
Sbjct: 191 RY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 99/210 (47%), Gaps = 17/210 (8%)
Query: 352 VIGRGGFGKVY--RGVLASNVQIAVKKV--SHDSKQGIKEFVAELVSMGRLRHRNLVKLR 407
IG+G F KV R +L ++AV+ + + + +++ E+ M L H N+VKL
Sbjct: 21 TIGKGNFAKVKLARHILTGK-EVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 408 GYCRRKGEFLLVYDYMPNGSLDKIL--HTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQ 465
+ LV +Y G + L H +K +FR I S + Y H+ +
Sbjct: 80 EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK-EARAKFRQI---VSAVQYCHQKF-- 133
Query: 466 VVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKAS 525
++HRD+K N+LLDAD+N K+ DFG + + + + G+ Y PEL + K
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN--KLDEFCGSPPYAAPELFQGKKYD 190
Query: 526 -TSTDVYAFGVFMLEVASGRRPVEQQGSME 554
DV++ GV + + SG P + Q E
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKE 220
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 100/206 (48%), Gaps = 20/206 (9%)
Query: 350 KDVIGRGGFGKVYRGVLASNVQ----IAVKKVSHDSKQGIK-EFVAELVSMGRLRHRNLV 404
+DV+G G F +V +LA + + +A+K ++ + +G + E+ + +++H N+V
Sbjct: 23 RDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 405 KLRGYCRRKGEFLLVYDYMPNGSL-DKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDW 463
L G L+ + G L D+I+ K R+I V + YLH+
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVE---KGFYTERDASRLIFQVLDAVKYLHD-- 134
Query: 464 EQVVLHRDIKPANVL---LDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMR 520
++HRD+KP N+L LD D + DFGL+++ D ++ T GT GY+ PE++
Sbjct: 135 -LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA--CGTPGYVAPEVLA 191
Query: 521 TGKASTSTDVYAFGVFMLEVASGRRP 546
S + D ++ GV + G P
Sbjct: 192 QKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 97/216 (44%), Gaps = 33/216 (15%)
Query: 346 GFKDKDVIGRGGFGKVYRGVLA-SNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLV 404
+ D VIG G FG VY+ L S +A+KKV D + +E L M +L H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 76
Query: 405 KLRGYCRRKGE------FLLVYDYMPNGSLDKILHTN--------IKPCLNWYQRFRIIR 450
+LR + GE LV DY+P H + I L YQ FR
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR--- 133
Query: 451 GVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNG-KLGDFGLARLYDHDTIPQTTKLVG 509
L Y+H + HRDIKP N+LLD D KL DFG A+ P + +
Sbjct: 134 ----SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PNVSYICS 185
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
+ Y PEL+ TS+ DV++ G + E+ G+
Sbjct: 186 RY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 97/216 (44%), Gaps = 33/216 (15%)
Query: 346 GFKDKDVIGRGGFGKVYRGVLA-SNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLV 404
+ D VIG G FG VY+ L S +A+KKV D + +E L M +L H N+V
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 89
Query: 405 KLRGYCRRKGE------FLLVYDYMPNGSLDKILHTN--------IKPCLNWYQRFRIIR 450
+LR + GE LV DY+P H + I L YQ FR
Sbjct: 90 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR--- 146
Query: 451 GVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNG-KLGDFGLARLYDHDTIPQTTKLVG 509
L Y+H + HRDIKP N+LLD D KL DFG A+ P + +
Sbjct: 147 ----SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PNVSYICS 198
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
+ Y PEL+ TS+ DV++ G + E+ G+
Sbjct: 199 RY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 119/283 (42%), Gaps = 47/283 (16%)
Query: 351 DVIGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYC 410
++IG+G FG+VY G V I + + D++ +K F E+++ + RH N+V G C
Sbjct: 39 ELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGAC 98
Query: 411 RRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHR 470
++ +L ++ + K L+ + +I + + G+ YLH + +LH+
Sbjct: 99 MSPPHLAIITSLCKGRTLYSVVR-DAKIVLDVNKTRQIAQEIVKGMGYLH---AKGILHK 154
Query: 471 DIKPANVLLDADLNGK--LGDFGL---------ARLYDHDTIPQTTKLVGTFGYMDPELM 519
D+K NV D NGK + DFGL R D I G ++ PE++
Sbjct: 155 DLKSKNVFYD---NGKVVITDFGLFSISGVLQAGRREDKLRIQN-----GWLCHLAPEII 206
Query: 520 RTGKASTS---------TDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWVCDCWKKGA 570
R T +DV+A G E+ + P + Q + + W+ G
Sbjct: 207 RQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAII---------WQMGT 257
Query: 571 IRDASDSRLEGICEEKQMELVLKLGLFCSHPKPEARPNMRQVM 613
L I K++ +L LFC + E RP ++M
Sbjct: 258 ---GMKPNLSQIGMGKEISDIL---LFCWAFEQEERPTFTKLM 294
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 17/210 (8%)
Query: 352 VIGRGGFGKVY--RGVLASNVQIAVKKV--SHDSKQGIKEFVAELVSMGRLRHRNLVKLR 407
IG+G F KV R +L ++AVK + + + +++ E+ M L H N+VKL
Sbjct: 21 TIGKGNFAKVKLARHILTGK-EVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 408 GYCRRKGEFLLVYDYMPNGSLDKIL--HTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQ 465
+ LV +Y G + L H +K +FR I S + Y H+ +
Sbjct: 80 EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK-EARAKFRQI---VSAVQYCHQKF-- 133
Query: 466 VVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKAS 525
++HRD+K N+LLDAD+N K+ DFG + + + G Y PEL + K
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGN--KLDAFCGAPPYAAPELFQGKKYD 190
Query: 526 -TSTDVYAFGVFMLEVASGRRPVEQQGSME 554
DV++ GV + + SG P + Q E
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKE 220
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 69/131 (52%), Gaps = 7/131 (5%)
Query: 418 LVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDIKPANV 477
+V +Y+ +L I+HT + + + +I L + H++ ++HRD+KPAN+
Sbjct: 93 IVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANI 147
Query: 478 LLDADLNGKLGDFGLARLY--DHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDVYAFGV 535
++ A K+ DFG+AR +++ QT ++GT Y+ PE R +DVY+ G
Sbjct: 148 MISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGC 207
Query: 536 FMLEVASGRRP 546
+ EV +G P
Sbjct: 208 VLYEVLTGEPP 218
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 105/202 (51%), Gaps = 16/202 (7%)
Query: 353 IGRGGFGKVYRGVLASNVQI-AVKKVS-HDSKQGI-KEFVAELVSMGRLRHRNLVKLRGY 409
IG G +G V++ +I A+K+V D +G+ + E+ + L+H+N+V+L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 410 CRRKGEFLLVYDYMPNGSLDKILHT---NIKPCLNWYQRFRIIRGVASGLLYLHEDWEQV 466
+ LV+++ + L K + ++ P + F++++G+ + H +
Sbjct: 70 LHSDKKLTLVFEFC-DQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLG----FCHS---RN 121
Query: 467 VLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKA-S 525
VLHRD+KP N+L++ + KL DFGLAR + + ++V T Y P+++ K S
Sbjct: 122 VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV-TLWYRPPDVLFGAKLYS 180
Query: 526 TSTDVYAFGVFMLEVASGRRPV 547
TS D+++ G E+A+ RP+
Sbjct: 181 TSIDMWSAGCIFAELANAARPL 202
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 99/213 (46%), Gaps = 28/213 (13%)
Query: 353 IGRGGFGKVY--------RGVLASNVQIAVKKVSHD-SKQGIKEFVAELVSMGRL-RHRN 402
+G G FG+V + V +AVK + D +++ + + V+E+ M + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNW-YQRFRI------------- 448
++ L G C + G ++ +Y G+L + L P + + Y R+
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 449 IRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDHDTIPQTTKL 507
+A G+ YL Q +HRD+ NVL+ + K+ DFGLAR + + D TT
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNG 219
Query: 508 VGTFGYMDPELMRTGKASTSTDVYAFGVFMLEV 540
+M PE + + +DV++FGV M E+
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 108/234 (46%), Gaps = 28/234 (11%)
Query: 345 KGFKDKDVIGRGGFGKVYRGVLASNV-QIAVKKV--------SHDSKQGIKEFVAELVSM 395
+ ++ K+++GRG V R + + AVK + S + Q ++E A L +
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELRE--ATLKEV 74
Query: 396 GRLR----HRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRG 451
LR H N+++L+ F LV+D M G L L + L+ + +I+R
Sbjct: 75 DILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV--TLSEKETRKIMRA 132
Query: 452 VASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTF 511
+ + LH+ ++HRD+KP N+LLD D+N KL DFG + D + ++ GT
Sbjct: 133 LLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE--KLREVCGTP 187
Query: 512 GYMDPELMRTGKAST------STDVYAFGVFMLEVASGRRPVEQQGSMETVNLV 559
Y+ PE++ D+++ GV M + +G P + M + ++
Sbjct: 188 SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMI 241
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 351 DVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGIK---EFVAELVSMGRLRHRNLVKL 406
+++G GG +V+ L + +AVK + D + F E + L H +V +
Sbjct: 18 EILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 407 --RGYCRRKGEFL--LVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHED 462
G L +V +Y+ +L I+HT + + + +I L + H++
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADACQALNFSHQN 135
Query: 463 WEQVVLHRDIKPANVLLDADLNGKLGDFGLARLY--DHDTIPQTTKLVGTFGYMDPELMR 520
++HRD+KPAN+++ A K+ DFG+AR +++ QT ++GT Y+ PE R
Sbjct: 136 G---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 192
Query: 521 TGKASTSTDVYAFGVFMLEVASGRRP 546
+DVY+ G + EV +G P
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 99/213 (46%), Gaps = 28/213 (13%)
Query: 353 IGRGGFGKVY--------RGVLASNVQIAVKKVSHD-SKQGIKEFVAELVSMGRL-RHRN 402
+G G FG+V + V +AVK + D +++ + + V+E+ M + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNW-YQRFRIIR----------- 450
++ L G C + G ++ +Y G+L + L P + Y R+
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 451 --GVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDHDTIPQTTKL 507
+A G+ YL Q +HRD+ NVL+ + K+ DFGLAR + + D +TT
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 508 VGTFGYMDPELMRTGKASTSTDVYAFGVFMLEV 540
+M PE + + +DV++FGV M E+
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 98/216 (45%), Gaps = 33/216 (15%)
Query: 346 GFKDKDVIGRGGFGKVYRGVLASNVQ-IAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLV 404
+ D VIG G FG VY+ L + + +A+KKV D + +E L M +L H N+V
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 110
Query: 405 KLRGYCRRKGE------FLLVYDYMPNGSLDKILHTN--------IKPCLNWYQRFRIIR 450
+LR + GE LV DY+P H + I L YQ FR
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR--- 167
Query: 451 GVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNG-KLGDFGLARLYDHDTIPQTTKLVG 509
L Y+H + HRDIKP N+LLD D KL DFG A+ P + +
Sbjct: 168 ----SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PNVSYICS 219
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
+ Y PEL+ TS+ DV++ G + E+ G+
Sbjct: 220 RY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 99/207 (47%), Gaps = 21/207 (10%)
Query: 353 IGRGGFGKVYRGVL----ASNVQIAVKKVSHD---SKQGIKEFVAELVSMGRLRHRNLVK 405
+G G FG V RG V +AVK + D + + +F+ E+ +M L HRNL++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 406 LRGYCRRKGEFLLVYDYMPNGSL-DKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWE 464
L G +V + P GSL D++ L R+ + VA G+ YL
Sbjct: 80 LYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLES--- 133
Query: 465 QVVLHRDIKPANVLLDADLNGKLGDFGLARLY----DHDTIPQTTKLVGTFGYMDPELMR 520
+ +HRD+ N+LL K+GDFGL R DH + + K+ F + PE ++
Sbjct: 134 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV--PFAWCAPESLK 191
Query: 521 TGKASTSTDVYAFGVFMLEVAS-GRRP 546
T S ++D + FGV + E+ + G+ P
Sbjct: 192 TRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 100/213 (46%), Gaps = 28/213 (13%)
Query: 353 IGRGGFGKVY--------RGVLASNVQIAVKKVSHD-SKQGIKEFVAELVSMGRL-RHRN 402
+G G FG+V + V +AVK + D +++ + + V+E+ M + +H+N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNW-YQRFRI------------- 448
++ L G C + G ++ +Y G+L + L P + + Y R+
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 449 IRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDHDTIPQTTKL 507
+A G+ YL Q +HRD+ NVL+ + K+ DFGLAR + + D +TT
Sbjct: 150 TYQLARGMEYLA---SQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 206
Query: 508 VGTFGYMDPELMRTGKASTSTDVYAFGVFMLEV 540
+M PE + + +DV++FGV M E+
Sbjct: 207 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 239
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 107/224 (47%), Gaps = 27/224 (12%)
Query: 340 LYKATKGFKDKDVIGRGGFGKVYRGVLASNVQ--IAVKKVSHDSKQ------GIKEFVAE 391
L +A + ++ IG G +GKV++ N +A+K+V + + I+E VA
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIRE-VAV 64
Query: 392 LVSMGRLRHRNLVKLRGYCR-----RKGEFLLVYDYMP---NGSLDKILHTNIKPCLNWY 443
L + H N+V+L C R+ + LV++++ LDK+ +
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKD 124
Query: 444 QRFRIIRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQ 503
F+++RG L +LH V+HRD+KP N+L+ + KL DFGLAR+Y
Sbjct: 125 MMFQLLRG----LDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM--A 175
Query: 504 TTKLVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEVASGRRPV 547
T +V T Y PE++ +T D+++ G E+ R+P+
Sbjct: 176 LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 98/210 (46%), Gaps = 17/210 (8%)
Query: 352 VIGRGGFGKVY--RGVLASNVQIAVKKV--SHDSKQGIKEFVAELVSMGRLRHRNLVKLR 407
IG+G F KV R +L ++AV+ + + + +++ E+ M L H N+VKL
Sbjct: 21 TIGKGNFAKVKLARHILTGK-EVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 408 GYCRRKGEFLLVYDYMPNGSLDKIL--HTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQ 465
+ LV +Y G + L H +K +FR I S + Y H+ +
Sbjct: 80 EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK-EARAKFRQI---VSAVQYCHQKF-- 133
Query: 466 VVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKAS 525
++HRD+K N+LLDAD+N K+ DFG + + T G+ Y PEL + K
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT--FCGSPPYAAPELFQGKKYD 190
Query: 526 -TSTDVYAFGVFMLEVASGRRPVEQQGSME 554
DV++ GV + + SG P + Q E
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKE 220
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 98/215 (45%), Gaps = 33/215 (15%)
Query: 347 FKDKDVIGRGGFGKVYRGVLASNVQ-IAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVK 405
+ D VIG G FG VY+ L + + +A+KKV D + +E L M +L H N+V+
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVR 156
Query: 406 LRGYCRRKGE------FLLVYDYMPNGSLDKILHTN--------IKPCLNWYQRFRIIRG 451
LR + GE LV DY+P H + I L YQ FR
Sbjct: 157 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR---- 212
Query: 452 VASGLLYLHEDWEQVVLHRDIKPANVLLDADLNG-KLGDFGLARLYDHDTIPQTTKLVGT 510
L Y+H + HRDIKP N+LLD D KL DFG A+ P + +
Sbjct: 213 ---SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PNVSYICSR 265
Query: 511 FGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
+ Y PEL+ TS+ DV++ G + E+ G+
Sbjct: 266 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 98/215 (45%), Gaps = 33/215 (15%)
Query: 347 FKDKDVIGRGGFGKVYRGVLASNVQ-IAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVK 405
+ D VIG G FG VY+ L + + +A+KKV D + +E L M +L H N+V+
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVR 115
Query: 406 LRGYCRRKGE------FLLVYDYMPNGSLDKILHTN--------IKPCLNWYQRFRIIRG 451
LR + GE LV DY+P H + I L YQ FR
Sbjct: 116 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR---- 171
Query: 452 VASGLLYLHEDWEQVVLHRDIKPANVLLDADLNG-KLGDFGLARLYDHDTIPQTTKLVGT 510
L Y+H + HRDIKP N+LLD D KL DFG A+ P + +
Sbjct: 172 ---SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PNVSYICSR 224
Query: 511 FGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
+ Y PEL+ TS+ DV++ G + E+ G+
Sbjct: 225 Y-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 98/216 (45%), Gaps = 33/216 (15%)
Query: 346 GFKDKDVIGRGGFGKVYRGVLASNVQ-IAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLV 404
+ D VIG G FG VY+ L + + +A+KKV D + +E L M +L H N+V
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIV 112
Query: 405 KLRGYCRRKGE------FLLVYDYMPNGSLDKILHTN--------IKPCLNWYQRFRIIR 450
+LR + GE LV DY+P H + I L YQ FR
Sbjct: 113 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR--- 169
Query: 451 GVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNG-KLGDFGLARLYDHDTIPQTTKLVG 509
L Y+H + HRDIKP N+LLD D KL DFG A+ P + +
Sbjct: 170 ----SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PNVSYICS 221
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
+ Y PEL+ TS+ DV++ G + E+ G+
Sbjct: 222 RY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 69/131 (52%), Gaps = 7/131 (5%)
Query: 418 LVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDIKPANV 477
+V +Y+ +L I+HT + + + +I L + H++ ++HRD+KPAN+
Sbjct: 110 IVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANI 164
Query: 478 LLDADLNGKLGDFGLARLY--DHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDVYAFGV 535
++ A K+ DFG+AR +++ QT ++GT Y+ PE R +DVY+ G
Sbjct: 165 MISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGC 224
Query: 536 FMLEVASGRRP 546
+ EV +G P
Sbjct: 225 VLYEVLTGEPP 235
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 100/213 (46%), Gaps = 28/213 (13%)
Query: 353 IGRGGFGKVY--------RGVLASNVQIAVKKVSHD-SKQGIKEFVAELVSMGRL-RHRN 402
+G G FG+V + V +AVK + D +++ + + V+E+ M + +H+N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNW-YQRFRI------------- 448
++ L G C + G ++ +Y G+L + L P + + Y R+
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 449 IRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDHDTIPQTTKL 507
+A G+ YL Q +HRD+ NVL+ + K+ DFGLAR + + D +TT
Sbjct: 152 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 208
Query: 508 VGTFGYMDPELMRTGKASTSTDVYAFGVFMLEV 540
+M PE + + +DV++FGV M E+
Sbjct: 209 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 241
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 100/213 (46%), Gaps = 28/213 (13%)
Query: 353 IGRGGFGKVY--------RGVLASNVQIAVKKVSHD-SKQGIKEFVAELVSMGRL-RHRN 402
+G G FG+V + V +AVK + D +++ + + V+E+ M + +H+N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNW-YQRFRI------------- 448
++ L G C + G ++ +Y G+L + L P + + Y R+
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 449 IRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDHDTIPQTTKL 507
+A G+ YL Q +HRD+ NVL+ + K+ DFGLAR + + D +TT
Sbjct: 155 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 211
Query: 508 VGTFGYMDPELMRTGKASTSTDVYAFGVFMLEV 540
+M PE + + +DV++FGV M E+
Sbjct: 212 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 244
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 107/234 (45%), Gaps = 28/234 (11%)
Query: 345 KGFKDKDVIGRGGFGKVYRGVLASNV-QIAVKKV--------SHDSKQGIKEFVAELVSM 395
+ ++ K+++GRG V R + + AVK + S + Q ++E A L +
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELRE--ATLKEV 74
Query: 396 GRLR----HRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRG 451
LR H N+++L+ F LV+D M G L L + L+ + +I+R
Sbjct: 75 DILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV--TLSEKETRKIMRA 132
Query: 452 VASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTF 511
+ + LH+ ++HRD+KP N+LLD D+N KL DFG + D + + GT
Sbjct: 133 LLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE--KLRSVCGTP 187
Query: 512 GYMDPELMRTGKAST------STDVYAFGVFMLEVASGRRPVEQQGSMETVNLV 559
Y+ PE++ D+++ GV M + +G P + M + ++
Sbjct: 188 SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMI 241
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 99/207 (47%), Gaps = 21/207 (10%)
Query: 353 IGRGGFGKVYRGVL----ASNVQIAVKKVSHD---SKQGIKEFVAELVSMGRLRHRNLVK 405
+G G FG V RG V +AVK + D + + +F+ E+ +M L HRNL++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 406 LRGYCRRKGEFLLVYDYMPNGSL-DKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWE 464
L G +V + P GSL D++ L R+ + VA G+ YL
Sbjct: 86 LYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLES--- 139
Query: 465 QVVLHRDIKPANVLLDADLNGKLGDFGLARLY----DHDTIPQTTKLVGTFGYMDPELMR 520
+ +HRD+ N+LL K+GDFGL R DH + + K+ F + PE ++
Sbjct: 140 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV--PFAWCAPESLK 197
Query: 521 TGKASTSTDVYAFGVFMLEVAS-GRRP 546
T S ++D + FGV + E+ + G+ P
Sbjct: 198 TRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 99/207 (47%), Gaps = 21/207 (10%)
Query: 353 IGRGGFGKVYRGVL----ASNVQIAVKKVSHD---SKQGIKEFVAELVSMGRLRHRNLVK 405
+G G FG V RG V +AVK + D + + +F+ E+ +M L HRNL++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 406 LRGYCRRKGEFLLVYDYMPNGSL-DKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWE 464
L G +V + P GSL D++ L R+ + VA G+ YL
Sbjct: 80 LYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLES--- 133
Query: 465 QVVLHRDIKPANVLLDADLNGKLGDFGLARLY----DHDTIPQTTKLVGTFGYMDPELMR 520
+ +HRD+ N+LL K+GDFGL R DH + + K+ F + PE ++
Sbjct: 134 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV--PFAWCAPESLK 191
Query: 521 TGKASTSTDVYAFGVFMLEVAS-GRRP 546
T S ++D + FGV + E+ + G+ P
Sbjct: 192 TRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 99/207 (47%), Gaps = 21/207 (10%)
Query: 353 IGRGGFGKVYRGVL----ASNVQIAVKKVSHD---SKQGIKEFVAELVSMGRLRHRNLVK 405
+G G FG V RG V +AVK + D + + +F+ E+ +M L HRNL++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 406 LRGYCRRKGEFLLVYDYMPNGSL-DKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWE 464
L G +V + P GSL D++ L R+ + VA G+ YL
Sbjct: 76 LYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLES--- 129
Query: 465 QVVLHRDIKPANVLLDADLNGKLGDFGLARLY----DHDTIPQTTKLVGTFGYMDPELMR 520
+ +HRD+ N+LL K+GDFGL R DH + + K+ F + PE ++
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV--PFAWCAPESLK 187
Query: 521 TGKASTSTDVYAFGVFMLEVAS-GRRP 546
T S ++D + FGV + E+ + G+ P
Sbjct: 188 TRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 100/213 (46%), Gaps = 28/213 (13%)
Query: 353 IGRGGFGKVY--------RGVLASNVQIAVKKVSHD-SKQGIKEFVAELVSMGRL-RHRN 402
+G G FG+V + V +AVK + D +++ + + V+E+ M + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNW-YQRFRI------------- 448
++ L G C + G ++ +Y G+L + L P + + Y R+
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 449 IRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDHDTIPQTTKL 507
+A G+ YL Q +HRD+ NVL+ + ++ DFGLAR + + D +TT
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNG 219
Query: 508 VGTFGYMDPELMRTGKASTSTDVYAFGVFMLEV 540
+M PE + + +DV++FGV M E+
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 100/213 (46%), Gaps = 28/213 (13%)
Query: 353 IGRGGFGKVY--------RGVLASNVQIAVKKVSHD-SKQGIKEFVAELVSMGRL-RHRN 402
+G G FG+V + V +AVK + D +++ + + V+E+ M + +H+N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNW-YQRFRIIR----------- 450
++ L G C + G ++ +Y G+L + L P + + Y R+
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 451 --GVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDHDTIPQTTKL 507
+A G+ YL Q +HRD+ NVL+ + K+ DFGLAR + + D +TT
Sbjct: 209 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 265
Query: 508 VGTFGYMDPELMRTGKASTSTDVYAFGVFMLEV 540
+M PE + + +DV++FGV M E+
Sbjct: 266 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 298
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 99/207 (47%), Gaps = 21/207 (10%)
Query: 353 IGRGGFGKVYRGVL----ASNVQIAVKKVSHD---SKQGIKEFVAELVSMGRLRHRNLVK 405
+G G FG V RG V +AVK + D + + +F+ E+ +M L HRNL++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 406 LRGYCRRKGEFLLVYDYMPNGSL-DKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWE 464
L G +V + P GSL D++ L R+ + VA G+ YL
Sbjct: 76 LYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLES--- 129
Query: 465 QVVLHRDIKPANVLLDADLNGKLGDFGLARLY----DHDTIPQTTKLVGTFGYMDPELMR 520
+ +HRD+ N+LL K+GDFGL R DH + + K+ F + PE ++
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV--PFAWCAPESLK 187
Query: 521 TGKASTSTDVYAFGVFMLEVAS-GRRP 546
T S ++D + FGV + E+ + G+ P
Sbjct: 188 TRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 17/215 (7%)
Query: 347 FKDKDVIGRGGFGKVY--RGVLASNVQIAVKKV--SHDSKQGIKEFVAELVSMGRLRHRN 402
++ + IG+G F KV R VL ++AVK + + + +++ E+ M L H N
Sbjct: 17 YRLQKTIGKGNFAKVKLARHVLTGR-EVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKIL--HTNIKPCLNWYQRFRIIRGVASGLLYLH 460
+VKL + LV +Y G + L H +K +FR I S + Y H
Sbjct: 76 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK-EARAKFRQI---VSAVQYCH 131
Query: 461 EDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMR 520
+ + ++HRD+K N+LLD D+N K+ DFG + + T G+ Y PEL +
Sbjct: 132 QKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDT--FCGSPPYAAPELFQ 186
Query: 521 TGKAS-TSTDVYAFGVFMLEVASGRRPVEQQGSME 554
K DV++ GV + + SG P + Q E
Sbjct: 187 GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE 221
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 107/224 (47%), Gaps = 27/224 (12%)
Query: 340 LYKATKGFKDKDVIGRGGFGKVYRGVLASNVQ--IAVKKVSHDSKQ------GIKEFVAE 391
L +A + ++ IG G +GKV++ N +A+K+V + + I+E VA
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIRE-VAV 64
Query: 392 LVSMGRLRHRNLVKLRGYCR-----RKGEFLLVYDYMP---NGSLDKILHTNIKPCLNWY 443
L + H N+V+L C R+ + LV++++ LDK+ +
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKD 124
Query: 444 QRFRIIRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQ 503
F+++RG L +LH V+HRD+KP N+L+ + KL DFGLAR+Y
Sbjct: 125 MMFQLLRG----LDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM--A 175
Query: 504 TTKLVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEVASGRRPV 547
T +V T Y PE++ +T D+++ G E+ R+P+
Sbjct: 176 LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 107/224 (47%), Gaps = 27/224 (12%)
Query: 340 LYKATKGFKDKDVIGRGGFGKVYRGVLASNVQ--IAVKKVSHDSKQ------GIKEFVAE 391
L +A + ++ IG G +GKV++ N +A+K+V + + I+E VA
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIRE-VAV 64
Query: 392 LVSMGRLRHRNLVKLRGYCR-----RKGEFLLVYDYMP---NGSLDKILHTNIKPCLNWY 443
L + H N+V+L C R+ + LV++++ LDK+ +
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKD 124
Query: 444 QRFRIIRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQ 503
F+++RG L +LH V+HRD+KP N+L+ + KL DFGLAR+Y
Sbjct: 125 MMFQLLRG----LDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM--A 175
Query: 504 TTKLVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEVASGRRPV 547
T +V T Y PE++ +T D+++ G E+ R+P+
Sbjct: 176 LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 107/225 (47%), Gaps = 28/225 (12%)
Query: 343 ATKGFKDKD---VIGRGGFGKVYRGVLASNVQI----AVKKVSHDSKQGI-----KEFVA 390
++ G +D D VIGRG + KV L +I VKK + + I ++ V
Sbjct: 47 SSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVF 106
Query: 391 ELVSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCL-NWYQRFRII 449
E S H LV L + + V +Y+ G L + H + L + RF
Sbjct: 107 EQAS----NHPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARFYSA 160
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR--LYDHDTIPQTTKL 507
++ L YLHE + +++RD+K NVLLD++ + KL D+G+ + L DT T+
Sbjct: 161 E-ISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT---TSTF 213
Query: 508 VGTFGYMDPELMRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGS 552
GT Y+ PE++R S D +A GV M E+ +GR P + GS
Sbjct: 214 CGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGS 258
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 105/225 (46%), Gaps = 26/225 (11%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGIKEFVAELVSMG 396
K+ Y+ + KDVIGRG V R V A+ + AVK + +++ E + E+
Sbjct: 90 KEFYQK---YDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREAT 146
Query: 397 R-----LR----HRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFR 447
R LR H +++ L LV+D M G L L + L+ +
Sbjct: 147 RRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKV--ALSEKETRS 204
Query: 448 IIRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKL 507
I+R + + +LH + ++HRD+KP N+LLD ++ +L DFG + + + +L
Sbjct: 205 IMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGE--KLREL 259
Query: 508 VGTFGYMDPELMRTGKAST------STDVYAFGVFMLEVASGRRP 546
GT GY+ PE+++ T D++A GV + + +G P
Sbjct: 260 CGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPP 304
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 99/213 (46%), Gaps = 28/213 (13%)
Query: 353 IGRGGFGKVY--------RGVLASNVQIAVKKVSHD-SKQGIKEFVAELVSMGRL-RHRN 402
+G G FG+V + V +AVK + D +++ + + V+E+ M + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNW-YQRFRIIR----------- 450
++ L G C + G ++ Y G+L + L P + + Y R+
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 451 --GVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDHDTIPQTTKL 507
+A G+ YL Q +HRD+ NVL+ + K+ DFGLAR + + D +TT
Sbjct: 163 TYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 508 VGTFGYMDPELMRTGKASTSTDVYAFGVFMLEV 540
+M PE + + +DV++FGV M E+
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 103/221 (46%), Gaps = 20/221 (9%)
Query: 343 ATKGFKDKD---VIGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRL- 398
++ G +D D VIGRG + KV L +I KV E + + + +
Sbjct: 15 SSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVF 74
Query: 399 ----RHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCL-NWYQRFRIIRGVA 453
H LV L + + V +Y+ G L + H + L + RF ++
Sbjct: 75 EQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARFYSAE-IS 131
Query: 454 SGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR--LYDHDTIPQTTKLVGTF 511
L YLHE + +++RD+K NVLLD++ + KL D+G+ + L DT T+ GT
Sbjct: 132 LALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT---TSXFCGTP 185
Query: 512 GYMDPELMRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGS 552
Y+ PE++R S D +A GV M E+ +GR P + GS
Sbjct: 186 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGS 226
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 99/213 (46%), Gaps = 28/213 (13%)
Query: 353 IGRGGFGKVY--------RGVLASNVQIAVKKVSHD-SKQGIKEFVAELVSMGRL-RHRN 402
+G G FG+V + V +AVK + D +++ + + V+E+ M + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNW-YQRFRI------------- 448
++ L G C + G ++ Y G+L + L P + + Y R+
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 449 IRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDHDTIPQTTKL 507
+A G+ YL Q +HRD+ NVL+ + K+ DFGLAR + + D +TT
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 508 VGTFGYMDPELMRTGKASTSTDVYAFGVFMLEV 540
+M PE + + +DV++FGV M E+
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 112/243 (46%), Gaps = 42/243 (17%)
Query: 353 IGRGGFGKVYRGV-LASNVQIAVKKV------SHDSKQGIKEFVAELVSMGRLRHRNLVK 405
+G+G +G V++ + + +AVKK+ S D+++ +E + G H N+V
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSG---HENIVN 73
Query: 406 LRGYCRRKGE--FLLVYDYMPNGSLDKILHTNI-KPCLNWYQRFRIIRGVASGLLYLHED 462
L R + LV+DYM L ++ NI +P Y +++I+ + YLH
Sbjct: 74 LLNVLRADNDRDVYLVFDYM-ETDLHAVIRANILEPVHKQYVVYQLIKVIK----YLHSG 128
Query: 463 WEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDH--------------------DTIP 502
+LHRD+KP+N+LL+A+ + K+ DFGL+R + + D P
Sbjct: 129 G---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQP 185
Query: 503 QTTKLVGTFGYMDPE-LMRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDW 561
T V T Y PE L+ + K + D+++ G + E+ G+ +M + +
Sbjct: 186 ILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIG 245
Query: 562 VCD 564
V D
Sbjct: 246 VID 248
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 101/218 (46%), Gaps = 20/218 (9%)
Query: 346 GFKDKD---VIGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRL---- 398
G +D D VIGRG + KV L +I KV E + + + +
Sbjct: 3 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQA 62
Query: 399 -RHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCL-NWYQRFRIIRGVASGL 456
H LV L + + V +Y+ G L + H + L + RF ++ L
Sbjct: 63 SNHPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARFYSAE-ISLAL 119
Query: 457 LYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR--LYDHDTIPQTTKLVGTFGYM 514
YLHE + +++RD+K NVLLD++ + KL D+G+ + L DT T+ GT Y+
Sbjct: 120 NYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT---TSXFCGTPNYI 173
Query: 515 DPELMRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGS 552
PE++R S D +A GV M E+ +GR P + GS
Sbjct: 174 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGS 211
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 101/218 (46%), Gaps = 20/218 (9%)
Query: 346 GFKDKD---VIGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRL---- 398
G +D D VIGRG + KV L +I KV E + + + +
Sbjct: 7 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQA 66
Query: 399 -RHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCL-NWYQRFRIIRGVASGL 456
H LV L + + V +Y+ G L + H + L + RF ++ L
Sbjct: 67 SNHPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARFYSAE-ISLAL 123
Query: 457 LYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR--LYDHDTIPQTTKLVGTFGYM 514
YLHE + +++RD+K NVLLD++ + KL D+G+ + L DT T+ GT Y+
Sbjct: 124 NYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT---TSXFCGTPNYI 177
Query: 515 DPELMRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGS 552
PE++R S D +A GV M E+ +GR P + GS
Sbjct: 178 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGS 215
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 28/206 (13%)
Query: 353 IGRGGFGKVYRGVL-----ASNVQIAVKKVSHDS-KQGIKEFVAELVSMGRLRHRNLVKL 406
+G G FGKV + +AVK + D Q + E+ + L H +++K
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 407 RGYCRRKGE--FLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWE 464
+G C +GE LV +Y+P GSL L + + Q + + G+ YLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRH---SIGLAQLLLFAQQICEGMAYLHS--- 135
Query: 465 QVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLV--------GTFGYMDP 516
Q +HR++ NVLLD D K+GDFGLA+ +P+ + F Y P
Sbjct: 136 QHYIHRNLAARNVLLDNDRLVKIGDFGLAK-----AVPEGHEYYRVREDGDSPVFWYA-P 189
Query: 517 ELMRTGKASTSTDVYAFGVFMLEVAS 542
E ++ K ++DV++FGV + E+ +
Sbjct: 190 ECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 113/247 (45%), Gaps = 25/247 (10%)
Query: 351 DVIGRGGFGKV--YRGVLASNVQIAVKKV--SHDSKQGIKEFVAELVSMGRLRHRNLVKL 406
+ IG G +G V R L Q+A+KK+ + D K + EL + +H N++ +
Sbjct: 60 ETIGNGAYGVVSSARRRLTGQ-QVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAI 118
Query: 407 RGYCRRK---GEFLLVY---DYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLH 460
+ R GEF VY D M L +I+H++ L + F + + GL Y+H
Sbjct: 119 KDILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQPLTLEHVRYF--LYQLLRGLKYMH 175
Query: 461 EDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR-----LYDHDTIPQTTKLVGTFGYMD 515
V+HRD+KP+N+L++ + K+GDFG+AR +H T+ V T Y
Sbjct: 176 SAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYF--MTEYVATRWYRA 230
Query: 516 PELMRTGKAST-STDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWVCDCWKKGAIRDA 574
PELM + T + D+++ G E+ + R+ + + + L+ V I+
Sbjct: 231 PELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAV 290
Query: 575 SDSRLEG 581
R+
Sbjct: 291 GAERVRA 297
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 112/246 (45%), Gaps = 23/246 (9%)
Query: 351 DVIGRGGFGKVYRGVLA-SNVQIAVKKVSH--DSKQGIKEFVAELVSMGRLRHRNLVKLR 407
+ IG G +G V + Q+A+KK+ + D K + EL + +H N++ ++
Sbjct: 61 ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIK 120
Query: 408 GYCRRK---GEFLLVY---DYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHE 461
R GEF VY D M L +I+H++ L + F + + GL Y+H
Sbjct: 121 DILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQPLTLEHVRYF--LYQLLRGLKYMHS 177
Query: 462 DWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR-----LYDHDTIPQTTKLVGTFGYMDP 516
V+HRD+KP+N+L++ + K+GDFG+AR +H T+ V T Y P
Sbjct: 178 AQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYF--MTEYVATRWYRAP 232
Query: 517 ELMRTGKAST-STDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWVCDCWKKGAIRDAS 575
ELM + T + D+++ G E+ + R+ + + + L+ V I+
Sbjct: 233 ELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVG 292
Query: 576 DSRLEG 581
R+
Sbjct: 293 AERVRA 298
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 28/206 (13%)
Query: 353 IGRGGFGKVYRGVL-----ASNVQIAVKKVSHDS-KQGIKEFVAELVSMGRLRHRNLVKL 406
+G G FGKV + +AVK + D Q + E+ + L H +++K
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 407 RGYCRRKGE--FLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWE 464
+G C +GE LV +Y+P GSL L + + Q + + G+ YLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRH---SIGLAQLLLFAQQICEGMAYLHA--- 135
Query: 465 QVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLV--------GTFGYMDP 516
Q +HR++ NVLLD D K+GDFGLA+ +P+ + F Y P
Sbjct: 136 QHYIHRNLAARNVLLDNDRLVKIGDFGLAK-----AVPEGHEYYRVREDGDSPVFWYA-P 189
Query: 517 ELMRTGKASTSTDVYAFGVFMLEVAS 542
E ++ K ++DV++FGV + E+ +
Sbjct: 190 ECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 95/190 (50%), Gaps = 19/190 (10%)
Query: 380 DSKQGIKEFVAELVS----MGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSL-DKILHT 434
D + I++F E+ + + L H N++KL K F LV ++ G L ++I++
Sbjct: 81 DDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINR 140
Query: 435 N-IKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDIKPANVLLDAD---LNGKLGDF 490
+ C I++ + SG+ YLH+ ++HRDIKP N+LL+ LN K+ DF
Sbjct: 141 HKFDEC----DAANIMKQILSGICYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDF 193
Query: 491 GLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEVASGRRPVEQQ 550
GL+ + D + +GT Y+ PE+++ K + DV++ GV M + G P Q
Sbjct: 194 GLSSFFSKDY--KLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQ 250
Query: 551 GSMETVNLVD 560
+ + V+
Sbjct: 251 NDQDIIKKVE 260
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 103/210 (49%), Gaps = 25/210 (11%)
Query: 352 VIGRGGFGKVYRGVL----ASNVQIAVKKVSHDSK-QGIKEFVAELVSMGRLRHRNLVKL 406
VIG+G FG VY G + +Q A+K +S ++ Q ++ F+ E + M L H N++ L
Sbjct: 28 VIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLAL 87
Query: 407 RGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRG-------VASGLLYL 459
G +L + +P+ L + H ++ + QR ++ VA G+ YL
Sbjct: 88 IG-------IMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYL 140
Query: 460 HEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDHD--TIPQTTKLVGTFGYMDP 516
E Q +HRD+ N +LD K+ DFGLAR + D + ++ Q +
Sbjct: 141 AE---QKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTAL 197
Query: 517 ELMRTGKASTSTDVYAFGVFMLEVASGRRP 546
E ++T + +T +DV++FGV + E+ + P
Sbjct: 198 ESLQTYRFTTKSDVWSFGVLLWELLTRGAP 227
>pdb|1DBN|A Chain A, Maackia Amurensis Leukoagglutinin (Lectin) With
Sialyllactose
pdb|1DBN|B Chain B, Maackia Amurensis Leukoagglutinin (Lectin) With
Sialyllactose
Length = 239
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 118/256 (46%), Gaps = 40/256 (15%)
Query: 23 LAQDVNQFIYHGFNEDAQLQRDGLASVHSNGLLQLTNTVSPQQE----GHAFYRLPIK-F 77
L+ +N F+ +A L G ASV S G+LQLT + Q + G A Y P++ +
Sbjct: 4 LSFTINNFV----PNEADLLFQGEASVSSTGVLQLTKVENGQPQKYSVGRALYAAPVRIW 59
Query: 78 NTXXXXXXXXXXNFVFAI----------GMAFVISPSKDLGKAEASPSEYLGLFNASNNG 127
+F F + G+AF ++P D S S+YLGLFN SN+
Sbjct: 60 GNTTGSVASFSTSFTFVVKAPNPDITSDGLAFYLAP-PDSQIPSGSVSKYLGLFNNSNS- 117
Query: 128 QSTNHILAIELDTVQNLDFDDIDDN--HVGIDVNSLISHESAPAAYFSDREGMNKTLELI 185
S+N I+A+E DT +D D N H+GIDVN + S ++ + I
Sbjct: 118 DSSNQIVAVEFDTYFAHSYDPWDPNYRHIGIDVNGIESIKTV-------------QWDWI 164
Query: 186 IGDPIQIWISYDGAEKLLNVTLAPMSIPKPTKPLLSRAINLSHILLETMYVGFSASTG-- 243
G I+Y K L +L S T ++ +++L IL E + VGFSA+TG
Sbjct: 165 NGGVAFATITYLAPNKTLIASLVYPS--NQTTFSVAASVDLKEILPEWVRVGFSAATGYP 222
Query: 244 SLKSSHYVLGWSFNRS 259
+ +H VL WSF +
Sbjct: 223 TEVETHDVLSWSFTST 238
>pdb|1FNY|A Chain A, Legume Lectin Of The Bark Of Robinia Pseudoacacia.
pdb|1FNZ|A Chain A, A Bark Lectin From Robinia Pseudoacacia In Complex With N-
Acetylgalactosamine
Length = 237
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 111/242 (45%), Gaps = 42/242 (17%)
Query: 41 LQRDGLASVHSNGLLQLTNTV----SPQQEGHAFYRLPIK-FNTXXXXXXXXXXNFVFAI 95
L G A V S G+LQLTN V S + G A Y P + +++ +F F I
Sbjct: 18 LINQGDALVTSTGVLQLTNVVNGVPSSKSLGRALYAAPFQIWDSTTGNVASFVTSFTFII 77
Query: 96 ----------GMAFVISPSKDLGKAEASPSEYLGLFNASNNG--QSTNHILAIELDTVQN 143
G+AF ++P + P + G+ +G +N I+A+E DT N
Sbjct: 78 QAPNPATTADGLAFFLAP------VDTQPLDLGGMLGIFKDGYFNKSNQIVAVEFDTFSN 131
Query: 144 LDFDDIDDNHVGIDVNSLISHESAPAAYFSDREGMNKTLELIIGDPIQIWISYDGAEKLL 203
D+D H+GI+VNS+ S ++ P + + G+ ++ISY+ + K L
Sbjct: 132 GDWDP-KGRHLGINVNSIESIKTVPWNWTN-------------GEVANVFISYEASTKSL 177
Query: 204 NVTLAPMSIPKPTKPLLSRAINLSHILLETMYVGFSASTGSLKS---SHYVLGWSFNRSG 260
+L S+ T ++ +++ +L E + GFSA+TG K ++ VL WSF +
Sbjct: 178 TASLVYPSL--ETSFIIDAIVDVKIVLPEWVRFGFSATTGIDKGYVQTNDVLSWSFESNL 235
Query: 261 PA 262
P
Sbjct: 236 PG 237
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 93/201 (46%), Gaps = 18/201 (8%)
Query: 353 IGRGGFGKVYRGVL-----ASNVQIAVKKVSHDS-KQGIKEFVAELVSMGRLRHRNLVKL 406
+G G FGKV + +AVK + D+ Q + E+ + L H +++K
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 407 RGYCRRKG--EFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWE 464
+G C G LV +Y+P GSL L + + Q + + G+ YLH
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYLPRH---SIGLAQLLLFAQQICEGMAYLHA--- 152
Query: 465 QVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG---TFGYMDPELMRT 521
Q +HRD+ NVLLD D K+GDFGLA+ + G F Y PE ++
Sbjct: 153 QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYA-PECLKE 211
Query: 522 GKASTSTDVYAFGVFMLEVAS 542
K ++DV++FGV + E+ +
Sbjct: 212 YKFYYASDVWSFGVTLYELLT 232
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 115/231 (49%), Gaps = 26/231 (11%)
Query: 335 FTYKDLYKATKGFKDKDVIGRGGFGKVYRGVLASNVQI-AVKKV--SHDSKQGIKEFVAE 391
FT +DL KD IGRG +G V + V + QI AVK++ + D K+ K+ + +
Sbjct: 19 FTAEDL-------KDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQ-KQLLMD 70
Query: 392 L-VSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKI---LHTNIKPCLNWYQRFR 447
L V M +V+ G R+G+ + + M + S DK +++ + + +
Sbjct: 71 LDVVMRSSDCPYIVQFYGALFREGDCWICMELM-STSFDKFYKYVYSVLDDVIPEEILGK 129
Query: 448 IIRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLA-RLYDHDTIPQTTK 506
I L +L E+ + ++HRDIKP+N+LLD N KL DFG++ +L D T+
Sbjct: 130 ITLATVKALNHLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIA---KTR 184
Query: 507 LVGTFGYMDPELMRTGKA----STSTDVYAFGVFMLEVASGRRPVEQQGSM 553
G YM PE + + +DV++ G+ + E+A+GR P + S+
Sbjct: 185 DAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSV 235
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 96/216 (44%), Gaps = 33/216 (15%)
Query: 346 GFKDKDVIGRGGFGKVYRGVLA-SNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLV 404
+ D VIG G FG VY+ L S +A+KKV QG EL M +L H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QGKAFKNRELQIMRKLDHCNIV 76
Query: 405 KLRGYCRRKGE------FLLVYDYMPNGSLDKILHTN--------IKPCLNWYQRFRIIR 450
+LR + GE LV DY+P H + I L YQ FR
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFR--- 133
Query: 451 GVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNG-KLGDFGLARLYDHDTIPQTTKLVG 509
L Y+H + HRDIKP N+LLD D KL DFG A+ P + +
Sbjct: 134 ----SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PNVSXICS 185
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
+ Y PEL+ TS+ DV++ G + E+ G+
Sbjct: 186 RY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 130/284 (45%), Gaps = 33/284 (11%)
Query: 343 ATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVS-HDSKQGIK-EFVAELVSMGRLR 399
AT ++ IG G +G VY+ S +A+K V + ++G+ V E+ + RL
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 400 ---HRNLVKLRGYCR-----RKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRG 451
H N+V+L C R+ + LV++++ + L L P L ++R
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 452 VASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTF 511
GL +LH + ++HRD+KP N+L+ + KL DFGLAR+Y + +V T
Sbjct: 121 FLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFGLARIYSYQM--ALAPVVVTL 175
Query: 512 GYMDPELMRTGKASTSTDVYAFGVFMLEVASGRRPV-------EQQGSM-ETVNLV---D 560
Y PE++ +T D+++ G E+ R+P+ +Q G + + + L D
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNSEADQLGKIFDLIGLPPEDD 234
Query: 561 WVCDC-WKKGAIRDASDSRLEGIC---EEKQMELVLKLGLFCSH 600
W D +GA ++ + EE +L+L++ F H
Sbjct: 235 WPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPH 278
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 96/216 (44%), Gaps = 33/216 (15%)
Query: 346 GFKDKDVIGRGGFGKVYRGVLA-SNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLV 404
+ D VIG G FG VY+ L S +A+KKV QG EL M +L H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QGKAFKNRELQIMRKLDHCNIV 76
Query: 405 KLRGYCRRKGE------FLLVYDYMPNGSLDKILHTN--------IKPCLNWYQRFRIIR 450
+LR + GE LV DY+P H + I L YQ FR
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR--- 133
Query: 451 GVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNG-KLGDFGLARLYDHDTIPQTTKLVG 509
L Y+H + HRDIKP N+LLD D KL DFG A+ P + +
Sbjct: 134 ----SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PNVSYICS 185
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
+ Y PEL+ TS+ DV++ G + E+ G+
Sbjct: 186 RY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 96/216 (44%), Gaps = 33/216 (15%)
Query: 346 GFKDKDVIGRGGFGKVYRGVLA-SNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLV 404
+ D VIG G FG VY+ L S +A+KKV QG EL M +L H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QGKAFKNRELQIMRKLDHCNIV 76
Query: 405 KLRGYCRRKGE------FLLVYDYMPNGSLDKILHTN--------IKPCLNWYQRFRIIR 450
+LR + GE LV DY+P H + I L YQ FR
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR--- 133
Query: 451 GVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNG-KLGDFGLARLYDHDTIPQTTKLVG 509
L Y+H + HRDIKP N+LLD D KL DFG A+ P + +
Sbjct: 134 ----SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PNVSYICS 185
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
+ Y PEL+ TS+ DV++ G + E+ G+
Sbjct: 186 RY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGI--KEFVAELVS 394
K +++ + +++ +G G +G V + +++AVKK+S + I K EL
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 395 MGRLRHRNLVKLRGY---CRRKGEFLLVY--DYMPNGSLDKILHTNIKPCLNWYQRFRII 449
+ ++H N++ L R EF VY ++ L+ I+ + + + +F +I
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF-LI 131
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG 509
+ GL Y+H ++HRD+KP+N+ ++ D K+ DFGLAR D + T V
Sbjct: 132 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVA 184
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
T Y PE+M T D+++ G M E+ +GR
Sbjct: 185 TRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1N47|A Chain A, Isolectin B4 From Vicia Villosa In Complex With The Tn
Antigen
pdb|1N47|B Chain B, Isolectin B4 From Vicia Villosa In Complex With The Tn
Antigen
pdb|1N47|C Chain C, Isolectin B4 From Vicia Villosa In Complex With The Tn
Antigen
pdb|1N47|D Chain D, Isolectin B4 From Vicia Villosa In Complex With The Tn
Antigen
Length = 233
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 108/252 (42%), Gaps = 44/252 (17%)
Query: 28 NQFIYHGFNEDAQ---LQRDGLASVHSNGLLQLTNTVS----PQQEGHAFYRLPI----- 75
F + FN + LQ D L V+S G L+LT + P G A Y PI
Sbjct: 4 TSFSFTNFNPNQNNLILQEDAL--VNSAGTLELTAVAAGAPVPDSLGRALYAAPIHIHDN 61
Query: 76 ----KFNTXXXXXXXXXXNFVFAIGMAFVISPSKDLGKAEASPSEYLGLFNASNNGQSTN 131
F T A G+AF ++P +A +LGLF A ++
Sbjct: 62 TTLASFTTSFSFVMAAPAAAAVADGLAFFLAPPDTQPQARGG---FLGLF-ADRAHDASY 117
Query: 132 HILAIELDTVQNLDFDDIDDNHVGIDVNSLISHESAPAAYFSDREGMNKTLELIIGDPIQ 191
+A+E DT N D + H+GID N + S ++ P +++ G+
Sbjct: 118 QTVAVEFDTYSNAW--DPNYTHIGIDTNGIESKKTTP-------------FDMVYGEKAN 162
Query: 192 IWISYDGAEKLLNVTLA-PMSIPKPTKPLLSRAINLSHILLETMYVGFSASTG---SLKS 247
I I+Y + K L +L P+S T +S ++L IL E + VGFSA+TG +
Sbjct: 163 IVITYQASTKALAASLVFPVS---QTSYAVSARVDLRDILPEYVRVGFSATTGLNAGVVE 219
Query: 248 SHYVLGWSFNRS 259
+H ++ WSF S
Sbjct: 220 THDIVSWSFAVS 231
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 106/217 (48%), Gaps = 16/217 (7%)
Query: 353 IGRGGFGKVYRGVL---ASNVQIAVKKVSHDSKQG-IKEFVAELVSMGRLRHRNLVKLRG 408
+G G FG V +GV + +A+K + +++ +E + E M +L + +V+L G
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 409 YCRRKGEFLLVYDYMPNGSLDKILHTNIK--PCLNWYQRFRIIRGVASGLLYLHEDWEQV 466
C+ + +LV + G L K L + P N + ++ V+ G+ YL E +
Sbjct: 78 VCQAEA-LMLVMEMAGGGPLHKFLVGKREEIPVSNVAE---LLHQVSMGMKYLEE---KN 130
Query: 467 VLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTF--GYMDPELMRTGKA 524
+HRD+ NVLL K+ DFGL++ D T + G + + PE + K
Sbjct: 131 FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKF 190
Query: 525 STSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVD 560
S+ +DV+++GV M E S G++P ++ E + ++
Sbjct: 191 SSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIE 227
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 105/202 (51%), Gaps = 16/202 (7%)
Query: 353 IGRGGFGKVYRGVLASNVQI-AVKKVS-HDSKQGI-KEFVAELVSMGRLRHRNLVKLRGY 409
IG G +G V++ +I A+K+V D +G+ + E+ + L+H+N+V+L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 410 CRRKGEFLLVYDYMPNGSLDKILHT---NIKPCLNWYQRFRIIRGVASGLLYLHEDWEQV 466
+ LV+++ + L K + ++ P + F++++G+ + H +
Sbjct: 70 LHSDKKLTLVFEFC-DQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLG----FCHS---RN 121
Query: 467 VLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKA-S 525
VLHRD+KP N+L++ + KL +FGLAR + + ++V T Y P+++ K S
Sbjct: 122 VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV-TLWYRPPDVLFGAKLYS 180
Query: 526 TSTDVYAFGVFMLEVASGRRPV 547
TS D+++ G E+A+ RP+
Sbjct: 181 TSIDMWSAGCIFAELANAGRPL 202
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGI--KEFVAELVS 394
K +++ + +++ IG G +G V + +++AVKK+S + I K EL
Sbjct: 20 KTIWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 79
Query: 395 MGRLRHRNLVKLRGY---CRRKGEFLLVY--DYMPNGSLDKILHTNIKPCLNWYQRFRII 449
+ ++H N++ L R EF VY ++ L+ I+ + + + +F +I
Sbjct: 80 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF-LI 136
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG 509
+ GL Y+H ++HRD+KP+N+ ++ D K+ DFGLAR D + T V
Sbjct: 137 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD----EMTGYVA 189
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
T Y PE+M T D+++ G M E+ +GR
Sbjct: 190 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 115/246 (46%), Gaps = 18/246 (7%)
Query: 352 VIGRGGFGKVYRGV-LASNVQIAVKKVSHDS---KQGIKEFVAEL-VSMGRLRHRNLVKL 406
VIG+G FGKV A V AVK + + K+ K ++E V + ++H LV L
Sbjct: 45 VIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGL 104
Query: 407 RGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPC-LNWYQRFRIIRGVASGLLYLHEDWEQ 465
+ + V DY+ G L H + C L RF +AS L YLH
Sbjct: 105 HFSFQTADKLYFVLDYINGGEL--FYHLQRERCFLEPRARFYAAE-IASALGYLHS---L 158
Query: 466 VVLHRDIKPANVLLDADLNGKLGDFGLARL-YDHDTIPQTTKLVGTFGYMDPELMRTGKA 524
+++RD+KP N+LLD+ + L DFGL + +H++ T+ GT Y+ PE++
Sbjct: 159 NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNST--TSTFCGTPEYLAPEVLHKQPY 216
Query: 525 STSTDVYAFGVFMLEVASGRRPVEQQGSMETV-NLVDWVCDCWKKGAIRDASDSRLEGIC 583
+ D + G + E+ G P + + E N+++ K I +++ LEG+
Sbjct: 217 DRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQL--KPNITNSARHLLEGLL 274
Query: 584 EEKQME 589
++ + +
Sbjct: 275 QKDRTK 280
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 17/206 (8%)
Query: 347 FKDKDVIGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKL 406
F+ + +GRG VYR + KV + K E+ + RL H N++KL
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDK-KIVRTEIGVLLRLSHPNIIKL 113
Query: 407 RGYCRRKGEFLLVYDYMPNGSL-DKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQ 465
+ E LV + + G L D+I+ K + ++ + + YLHE+
Sbjct: 114 KEIFETPTEISLVLELVTGGELFDRIVE---KGYYSERDAADAVKQILEAVAYLHENG-- 168
Query: 466 VVLHRDIKPANVLL-----DADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMR 520
++HRD+KP N+L DA L K+ DFGL+++ +H + +T + GT GY PE++R
Sbjct: 169 -IVHRDLKPENLLYATPAPDAPL--KIADFGLSKIVEHQVLMKT--VCGTPGYCAPEILR 223
Query: 521 TGKASTSTDVYAFGVFMLEVASGRRP 546
D+++ G+ + G P
Sbjct: 224 GCAYGPEVDMWSVGIITYILLCGFEP 249
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGI--KEFVAELVS 394
K +++ + +++ +G G +G V + +++AVKK+S + I K EL
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 81
Query: 395 MGRLRHRNLVKLRGY---CRRKGEFLLVY--DYMPNGSLDKILHTNIKPCLNWYQRFRII 449
+ ++H N++ L R EF VY ++ L+ I+ + + + +F +I
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF-LI 138
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG 509
+ GL Y+H ++HRD+KP+N+ ++ D K+ DFGLAR T + T V
Sbjct: 139 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTADEMTGYVA 191
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
T Y PE+M T D+++ G M E+ +GR
Sbjct: 192 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 121/287 (42%), Gaps = 50/287 (17%)
Query: 352 VIGRGGFGKVYRGVL------ASNVQIAVKKVSHD-SKQGIKEFVAELVSMGRLRHRNLV 404
+G G FGKV + A +AVK + + S +++ ++E + ++ H +++
Sbjct: 30 TLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVI 89
Query: 405 KLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIK----------------------PCLNW 442
KL G C + G LL+ +Y GSL L + K L
Sbjct: 90 KLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTM 149
Query: 443 YQRFRIIRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDHDTI 501
++ G+ YL E ++HRD+ N+L+ K+ DFGL+R +Y+ D+
Sbjct: 150 GDLISFAWQISQGMQYLAE---MSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSX 206
Query: 502 PQTTKLVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVD 560
+ ++ +M E + +T +DV++FGV + E+ + G P NL+
Sbjct: 207 VKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLL- 265
Query: 561 WVCDCWKKGAIRDASDSRLEGICEEKQMELVLKLGLFCSHPKPEARP 607
K G + D+ C E+ L+L+ C +P+ RP
Sbjct: 266 ------KTGHRMERPDN-----CSEEMYRLMLQ----CWKQEPDKRP 297
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGI--KEFVAELVS 394
K +++ + +++ +G G +G V + +++AVKK+S + I K EL
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 81
Query: 395 MGRLRHRNLVKLRGY---CRRKGEFLLVY--DYMPNGSLDKILHTNIKPCLNWYQRFRII 449
+ ++H N++ L R EF VY ++ L+ I+ + + + +F +I
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF-LI 138
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG 509
+ GL Y+H ++HRD+KP+N+ ++ D K+ DFGLAR T + T V
Sbjct: 139 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTADEMTGYVA 191
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
T Y PE+M T D+++ G M E+ +GR
Sbjct: 192 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 130/284 (45%), Gaps = 33/284 (11%)
Query: 343 ATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVS-HDSKQGIK-EFVAELVSMGRLR 399
AT ++ IG G +G VY+ S +A+K V + ++G+ V E+ + RL
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 400 ---HRNLVKLRGYCR-----RKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRG 451
H N+V+L C R+ + LV++++ + L L P L ++R
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 452 VASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTF 511
GL +LH + ++HRD+KP N+L+ + KL DFGLAR+Y + +V T
Sbjct: 121 FLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFGLARIYSYQM--ALDPVVVTL 175
Query: 512 GYMDPELMRTGKASTSTDVYAFGVFMLEVASGRRPV-------EQQGSM-ETVNLV---D 560
Y PE++ +T D+++ G E+ R+P+ +Q G + + + L D
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNSEADQLGKIFDLIGLPPEDD 234
Query: 561 WVCDC-WKKGAIRDASDSRLEGIC---EEKQMELVLKLGLFCSH 600
W D +GA ++ + EE +L+L++ F H
Sbjct: 235 WPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPH 278
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGI--KEFVAELVS 394
K +++ + +++ +G G +G V + +++AVKK+S + I K EL
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 81
Query: 395 MGRLRHRNLVKLRGY---CRRKGEFLLVY--DYMPNGSLDKILHTNIKPCLNWYQRFRII 449
+ ++H N++ L R EF VY ++ L+ I+ + + + +F +I
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF-LI 138
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG 509
+ GL Y+H ++HRD+KP+N+ ++ D K+ DFGLAR T + T V
Sbjct: 139 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTADEMTGYVA 191
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
T Y PE+M T D+++ G M E+ +GR
Sbjct: 192 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 128/288 (44%), Gaps = 38/288 (13%)
Query: 343 ATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSK---------QGIKEFVAEL 392
AT ++ IG G +G VY+ S +A+K V + ++E VA L
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVRE-VALL 65
Query: 393 VSMGRLRHRNLVKLRGYCR-----RKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFR 447
+ H N+V+L C R+ + LV++++ + L L P L
Sbjct: 66 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKD 124
Query: 448 IIRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKL 507
++R GL +LH + ++HRD+KP N+L+ + KL DFGLAR+Y + T +
Sbjct: 125 LMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFGLARIYSYQM--ALTPV 179
Query: 508 VGTFGYMDPELMRTGKASTSTDVYAFGVFMLEVASGRRPV-------EQQGSM-ETVNLV 559
V T Y PE++ +T D+++ G E+ R+P+ +Q G + + + L
Sbjct: 180 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNSEADQLGKIFDLIGLP 238
Query: 560 ---DWVCDC-WKKGAIRDASDSRLEGIC---EEKQMELVLKLGLFCSH 600
DW D +GA ++ + EE +L+L++ F H
Sbjct: 239 PEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPH 286
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGI--KEFVAELVS 394
K +++ + +++ +G G +G V + +++AVKK+S + I K EL
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 395 MGRLRHRNLVKLRGY---CRRKGEFLLVY--DYMPNGSLDKILHTNIKPCLNWYQRFRII 449
+ ++H N++ L R EF VY ++ L+ I+ + + + +F +I
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF-LI 131
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG 509
+ GL Y+H ++HRD+KP+N+ ++ D K+ DFGLAR D + T V
Sbjct: 132 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVA 184
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
T Y PE+M T D+++ G M E+ +GR
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGI--KEFVAELVS 394
K +++ + +++ +G G +G V + +++AVKK+S + I K EL
Sbjct: 20 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 79
Query: 395 MGRLRHRNLVKLRGY---CRRKGEFLLVY--DYMPNGSLDKILHTNIKPCLNWYQRFRII 449
+ ++H N++ L R EF VY ++ L+ I+ + + + +F +I
Sbjct: 80 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF-LI 136
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG 509
+ GL Y+H ++HRD+KP+N+ ++ D K+ DFGLAR D + T V
Sbjct: 137 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVA 189
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
T Y PE+M T D+++ G M E+ +GR
Sbjct: 190 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGI--KEFVAELVS 394
K +++ + +++ +G G +G V + +++AVKK+S + I K EL
Sbjct: 14 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 73
Query: 395 MGRLRHRNLVKLRGY---CRRKGEFLLVY--DYMPNGSLDKILHTNIKPCLNWYQRFRII 449
+ ++H N++ L R EF VY ++ L+ I+ + + + +F +I
Sbjct: 74 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF-LI 130
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG 509
+ GL Y+H ++HRD+KP+N+ ++ D K+ DFGLAR D + T V
Sbjct: 131 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVA 183
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
T Y PE+M T D+++ G M E+ +GR
Sbjct: 184 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGI--KEFVAELVS 394
K +++ + +++ +G G +G V + +++AVKK+S + I K EL
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 395 MGRLRHRNLVKLRGY---CRRKGEFLLVY--DYMPNGSLDKILHTNIKPCLNWYQRFRII 449
+ ++H N++ L R EF VY ++ L+ I+ + + + +F +I
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF-LI 131
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG 509
+ GL Y+H ++HRD+KP+N+ ++ D K+ DFGLAR D + T V
Sbjct: 132 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVA 184
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
T Y PE+M T D+++ G M E+ +GR
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 97/207 (46%), Gaps = 10/207 (4%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDS---KQGIKEFVAELVSMGR-LRHRNLVKLRG 408
+G+GGF K Y ++ KV S K KE ++ +++ + L + ++V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 409 YCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVL 468
+ +V + SL + LH K R+ +R G+ YLH + V+
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARY-FMRQTIQGVQYLHNNR---VI 164
Query: 469 HRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTST 528
HRD+K N+ L+ D++ K+GDFGLA + D + T L GT Y+ PE++ S
Sbjct: 165 HRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT-LCGTPNYIAPEVLCKKGHSFEV 223
Query: 529 DVYAFGVFMLEVASGRRPVEQQGSMET 555
D+++ G + + G+ P E ET
Sbjct: 224 DIWSLGCILYTLLVGKPPFETSCLKET 250
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 121/287 (42%), Gaps = 50/287 (17%)
Query: 352 VIGRGGFGKVYRGVL------ASNVQIAVKKVSHD-SKQGIKEFVAELVSMGRLRHRNLV 404
+G G FGKV + A +AVK + + S +++ ++E + ++ H +++
Sbjct: 30 TLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVI 89
Query: 405 KLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIK----------------------PCLNW 442
KL G C + G LL+ +Y GSL L + K L
Sbjct: 90 KLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTM 149
Query: 443 YQRFRIIRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDHDTI 501
++ G+ YL E ++HRD+ N+L+ K+ DFGL+R +Y+ D+
Sbjct: 150 GDLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSY 206
Query: 502 PQTTKLVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVD 560
+ ++ +M E + +T +DV++FGV + E+ + G P NL+
Sbjct: 207 VKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLL- 265
Query: 561 WVCDCWKKGAIRDASDSRLEGICEEKQMELVLKLGLFCSHPKPEARP 607
K G + D+ C E+ L+L+ C +P+ RP
Sbjct: 266 ------KTGHRMERPDN-----CSEEMYRLMLQ----CWKQEPDKRP 297
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 99/207 (47%), Gaps = 15/207 (7%)
Query: 350 KDVIGRGGFGKVYRGV-LASNVQIAVKKVSHD--SKQGIKEFVAELVS-MGRLRHRNLVK 405
++ +G G FGKV + ++A+K +S K + V +S + LRH +++K
Sbjct: 14 RETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIK 73
Query: 406 LRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQ 465
L + ++V +Y D I+ K + + R + + + Y H
Sbjct: 74 LYDVITTPTDIVMVIEYAGGELFDYIVE---KKRMTEDEGRRFFQQIICAIEYCHR---H 127
Query: 466 VVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGK-- 523
++HRD+KP N+LLD +LN K+ DFGL+ + +T+ G+ Y PE++ GK
Sbjct: 128 KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPEVI-NGKLY 184
Query: 524 ASTSTDVYAFGVFMLEVASGRRPVEQQ 550
A DV++ G+ + + GR P + +
Sbjct: 185 AGPEVDVWSCGIVLYVMLVGRLPFDDE 211
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGI--KEFVAELVS 394
K +++ + +++ +G G +G V + +++AVKK+S + I K EL
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 81
Query: 395 MGRLRHRNLVKLRGY---CRRKGEFLLVY--DYMPNGSLDKILHTNIKPCLNWYQRFRII 449
+ ++H N++ L R EF VY ++ L+ I+ + + + +F +I
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF-LI 138
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG 509
+ GL Y+H ++HRD+KP+N+ ++ D K+ DFGLAR D + T V
Sbjct: 139 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVA 191
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
T Y PE+M T D+++ G M E+ +GR
Sbjct: 192 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGI--KEFVAELVS 394
K +++ + +++ +G G +G V + +++AVKK+S + I K EL
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 395 MGRLRHRNLVKLRGY---CRRKGEFLLVY--DYMPNGSLDKILHTNIKPCLNWYQRFRII 449
+ ++H N++ L R EF VY ++ L+ I+ + + + +F +I
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF-LI 131
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG 509
+ GL Y+H ++HRD+KP+N+ ++ D K+ DFGLAR D + T V
Sbjct: 132 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVA 184
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
T Y PE+M T D+++ G M E+ +GR
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 130/284 (45%), Gaps = 33/284 (11%)
Query: 343 ATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVS-HDSKQGIK-EFVAELVSMGRLR 399
AT ++ IG G +G VY+ S +A+K V + ++G+ V E+ + RL
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 400 ---HRNLVKLRGYCR-----RKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRG 451
H N+V+L C R+ + LV++++ + L L P L ++R
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 452 VASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTF 511
GL +LH + ++HRD+KP N+L+ + KL DFGLAR+Y + +V T
Sbjct: 121 FLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFGLARIYSYQM--ALFPVVVTL 175
Query: 512 GYMDPELMRTGKASTSTDVYAFGVFMLEVASGRRPV-------EQQGSM-ETVNLV---D 560
Y PE++ +T D+++ G E+ R+P+ +Q G + + + L D
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNSEADQLGKIFDLIGLPPEDD 234
Query: 561 WVCDC-WKKGAIRDASDSRLEGIC---EEKQMELVLKLGLFCSH 600
W D +GA ++ + EE +L+L++ F H
Sbjct: 235 WPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPH 278
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGI--KEFVAELVS 394
K +++ + +++ +G G +G V + +++AVKK+S + I K EL
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 76
Query: 395 MGRLRHRNLVKLRGY---CRRKGEFLLVY--DYMPNGSLDKILHTNIKPCLNWYQRFRII 449
+ ++H N++ L R EF VY ++ L+ I+ + + + +F +I
Sbjct: 77 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF-LI 133
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG 509
+ GL Y+H ++HRD+KP+N+ ++ D K+ DFGLAR D + T V
Sbjct: 134 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVA 186
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
T Y PE+M T D+++ G M E+ +GR
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGI--KEFVAELVS 394
K +++ + +++ +G G +G V + +++AVKK+S + I K EL
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 395 MGRLRHRNLVKLRGY---CRRKGEFLLVY--DYMPNGSLDKILHTNIKPCLNWYQRFRII 449
+ ++H N++ L R EF VY ++ L+ I+ + + + +F +I
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF-LI 131
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG 509
+ GL Y+H ++HRD+KP+N+ ++ D K+ DFGLAR D + T V
Sbjct: 132 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVA 184
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
T Y PE+M T D+++ G M E+ +GR
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGI--KEFVAELVS 394
K +++ + +++ +G G +G V + +++AVKK+S + I K EL
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 80
Query: 395 MGRLRHRNLVKLRGY---CRRKGEFLLVY--DYMPNGSLDKILHTNIKPCLNWYQRFRII 449
+ ++H N++ L R EF VY ++ L+ I+ + + + +F +I
Sbjct: 81 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF-LI 137
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG 509
+ GL Y+H ++HRD+KP+N+ ++ D K+ DFGLAR D + T V
Sbjct: 138 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVA 190
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
T Y PE+M T D+++ G M E+ +GR
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGI--KEFVAELVS 394
K +++ + +++ +G G +G V + +++AVKK+S + I K EL
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 395 MGRLRHRNLVKLRGY---CRRKGEFLLVY--DYMPNGSLDKILHTNIKPCLNWYQRFRII 449
+ ++H N++ L R EF VY ++ L+ I+ + + + +F +I
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF-LI 131
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG 509
+ GL Y+H ++HRD+KP+N+ ++ D K+ DFGLAR D + T V
Sbjct: 132 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVA 184
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
T Y PE+M T D+++ G M E+ +GR
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 121/287 (42%), Gaps = 50/287 (17%)
Query: 352 VIGRGGFGKVYRGVL------ASNVQIAVKKVSHD-SKQGIKEFVAELVSMGRLRHRNLV 404
+G G FGKV + A +AVK + + S +++ ++E + ++ H +++
Sbjct: 30 TLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVI 89
Query: 405 KLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIK----------------------PCLNW 442
KL G C + G LL+ +Y GSL L + K L
Sbjct: 90 KLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTM 149
Query: 443 YQRFRIIRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDHDTI 501
++ G+ YL E ++HRD+ N+L+ K+ DFGL+R +Y+ D+
Sbjct: 150 GDLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSX 206
Query: 502 PQTTKLVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVD 560
+ ++ +M E + +T +DV++FGV + E+ + G P NL+
Sbjct: 207 VKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLL- 265
Query: 561 WVCDCWKKGAIRDASDSRLEGICEEKQMELVLKLGLFCSHPKPEARP 607
K G + D+ C E+ L+L+ C +P+ RP
Sbjct: 266 ------KTGHRMERPDN-----CSEEMYRLMLQ----CWKQEPDKRP 297
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGI--KEFVAELVS 394
K +++ + +++ +G G +G V + +++AVKK+S + I K EL
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 76
Query: 395 MGRLRHRNLVKLRGY---CRRKGEFLLVY--DYMPNGSLDKILHTNIKPCLNWYQRFRII 449
+ ++H N++ L R EF VY ++ L+ I+ + + + +F +I
Sbjct: 77 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF-LI 133
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG 509
+ GL Y+H ++HRD+KP+N+ ++ D K+ DFGLAR D + T V
Sbjct: 134 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVA 186
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
T Y PE+M T D+++ G M E+ +GR
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGI--KEFVAELVS 394
K +++ + +++ +G G +G V + +++AVKK+S + I K EL
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 76
Query: 395 MGRLRHRNLVKLRGY---CRRKGEFLLVY--DYMPNGSLDKILHTNIKPCLNWYQRFRII 449
+ ++H N++ L R EF VY ++ L+ I+ + + + +F +I
Sbjct: 77 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF-LI 133
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG 509
+ GL Y+H ++HRD+KP+N+ ++ D K+ DFGLAR D + T V
Sbjct: 134 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVA 186
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
T Y PE+M T D+++ G M E+ +GR
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 95/209 (45%), Gaps = 15/209 (7%)
Query: 352 VIGRGGFGKVY--RGVLAS-NVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRG 408
IG+G F KV R +L V I + + + +++ E+ M L H N+VKL
Sbjct: 19 TIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFE 78
Query: 409 YCRRKGEFLLVYDYMPNGSLDKIL--HTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQV 466
+ L+ +Y G + L H +K +FR I S + Y H+ +
Sbjct: 79 VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEK-EARSKFRQI---VSAVQYCHQ---KR 131
Query: 467 VLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGK-AS 525
++HRD+K N+LLDAD+N K+ DFG + + T G+ Y PEL + K
Sbjct: 132 IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDT--FCGSPPYAAPELFQGKKYDG 189
Query: 526 TSTDVYAFGVFMLEVASGRRPVEQQGSME 554
DV++ GV + + SG P + Q E
Sbjct: 190 PEVDVWSLGVILYTLVSGSLPFDGQNLKE 218
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGI--KEFVAELVS 394
K +++ + +++ +G G +G V + +++AVKK+S + I K EL
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 395 MGRLRHRNLVKLRGY---CRRKGEFLLVY--DYMPNGSLDKILHTNIKPCLNWYQRFRII 449
+ ++H N++ L R EF VY ++ L+ I+ + + + +F +I
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF-LI 131
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG 509
+ GL Y+H ++HRD+KP+N+ ++ D K+ DFGLAR D + T V
Sbjct: 132 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVA 184
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
T Y PE+M T D+++ G M E+ +GR
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGI--KEFVAELVS 394
K +++ + +++ +G G +G V + +++AVKK+S + I K EL
Sbjct: 20 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 79
Query: 395 MGRLRHRNLVKLRGY---CRRKGEFLLVY--DYMPNGSLDKILHTNIKPCLNWYQRFRII 449
+ ++H N++ L R EF VY ++ L+ I+ + + + +F +I
Sbjct: 80 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF-LI 136
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG 509
+ GL Y+H ++HRD+KP+N+ ++ D K+ DFGLAR D + T V
Sbjct: 137 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD----EMTGYVA 189
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
T Y PE+M T D+++ G M E+ +GR
Sbjct: 190 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 107/259 (41%), Gaps = 32/259 (12%)
Query: 314 VRNKRYEEVYEDWEREYGPQRFTYKDLYKATKGFKDKDVIGRGGFGKVYRGVLASNVQIA 373
+R +Y + +W + P K++ + F+ VIGRG FG+V + + +I
Sbjct: 46 LRRDKYVAEFLEWAK---PFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIY 102
Query: 374 VKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCR----------RKGEFLLVYDYM 423
K+ + K + + R V + G C+ + LV DY
Sbjct: 103 AMKILN------KWEMLKRAETACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYY 156
Query: 424 PNGSLDKILHTNIKPCLNWYQRFRIIRGVAS--GLLYLHEDWEQVVLHRDIKPANVLLDA 481
G L +L RF I V + + LH +HRDIKP NVLLD
Sbjct: 157 VGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLH------YVHRDIKPDNVLLDV 210
Query: 482 DLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRT-----GKASTSTDVYAFGVF 536
+ + +L DFG + D Q++ VGT Y+ PE+++ GK D ++ GV
Sbjct: 211 NGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVC 270
Query: 537 MLEVASGRRPVEQQGSMET 555
M E+ G P + +ET
Sbjct: 271 MYEMLYGETPFYAESLVET 289
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 107/259 (41%), Gaps = 32/259 (12%)
Query: 314 VRNKRYEEVYEDWEREYGPQRFTYKDLYKATKGFKDKDVIGRGGFGKVYRGVLASNVQIA 373
+R +Y + +W + P K++ + F+ VIGRG FG+V + + +I
Sbjct: 62 LRRDKYVAEFLEWAK---PFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIY 118
Query: 374 VKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCR----------RKGEFLLVYDYM 423
K+ + K + + R V + G C+ + LV DY
Sbjct: 119 AMKILN------KWEMLKRAETACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYY 172
Query: 424 PNGSLDKILHTNIKPCLNWYQRFRIIRGVAS--GLLYLHEDWEQVVLHRDIKPANVLLDA 481
G L +L RF I V + + LH +HRDIKP NVLLD
Sbjct: 173 VGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLH------YVHRDIKPDNVLLDV 226
Query: 482 DLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRT-----GKASTSTDVYAFGVF 536
+ + +L DFG + D Q++ VGT Y+ PE+++ GK D ++ GV
Sbjct: 227 NGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVC 286
Query: 537 MLEVASGRRPVEQQGSMET 555
M E+ G P + +ET
Sbjct: 287 MYEMLYGETPFYAESLVET 305
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGI--KEFVAELVS 394
K +++ + +++ +G G +G V + +++AVKK+S + I K EL
Sbjct: 20 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 79
Query: 395 MGRLRHRNLVKLRGY---CRRKGEFLLVY--DYMPNGSLDKILHTNIKPCLNWYQRFRII 449
+ ++H N++ L R EF VY ++ L+ I+ + + + +F +I
Sbjct: 80 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF-LI 136
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG 509
+ GL Y+H ++HRD+KP+N+ ++ D K+ DFGLAR D + T V
Sbjct: 137 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVA 189
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
T Y PE+M T D+++ G M E+ +GR
Sbjct: 190 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGI--KEFVAELVS 394
K +++ + +++ +G G +G V + +++AVKK+S + I K EL
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 395 MGRLRHRNLVKLRGY---CRRKGEFLLVY--DYMPNGSLDKILHTNIKPCLNWYQRFRII 449
+ ++H N++ L R EF VY ++ L+ I+ + + + +F +I
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KXQKLTDDHVQF-LI 131
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG 509
+ GL Y+H ++HRD+KP+N+ ++ D K+ DFGLAR D + T V
Sbjct: 132 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVA 184
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
T Y PE+M T D+++ G M E+ +GR
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGI--KEFVAELVS 394
K +++ + +++ +G G +G V + +++AVKK+S + I K EL
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 80
Query: 395 MGRLRHRNLVKLRGY---CRRKGEFLLVY--DYMPNGSLDKILHTNIKPCLNWYQRFRII 449
+ ++H N++ L R EF VY ++ L+ I+ + + + +F +I
Sbjct: 81 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF-LI 137
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG 509
+ GL Y+H ++HRD+KP+N+ ++ D K+ DFGLAR D + T V
Sbjct: 138 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVA 190
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
T Y PE+M T D+++ G M E+ +GR
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGI--KEFVAELVS 394
K +++ + +++ +G G +G V + +++AVKK+S + I K EL
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 395 MGRLRHRNLVKLRGY---CRRKGEFLLVY--DYMPNGSLDKILHTNIKPCLNWYQRFRII 449
+ ++H N++ L R EF VY ++ L+ I+ + + + +F +I
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF-LI 131
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG 509
+ GL Y+H ++HRD+KP+N+ ++ D K+ DFGLAR D + T V
Sbjct: 132 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGXVA 184
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
T Y PE+M T D+++ G M E+ +GR
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGI--KEFVAELVS 394
K +++ + +++ +G G +G V + +++AVKK+S + I K EL
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 395 MGRLRHRNLVKLRGY---CRRKGEFLLVY--DYMPNGSLDKILHTNIKPCLNWYQRFRII 449
+ ++H N++ L R EF VY ++ L+ I+ + + + +F +I
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF-LI 131
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG 509
+ GL Y+H ++HRD+KP+N+ ++ D K+ DFGLAR D + T V
Sbjct: 132 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVA 184
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
T Y PE+M T D+++ G M E+ +GR
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGI--KEFVAELVS 394
K +++ + +++ +G G +G V + +++AVKK+S + I K EL
Sbjct: 12 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 71
Query: 395 MGRLRHRNLVKLRGY---CRRKGEFLLVY--DYMPNGSLDKILHTNIKPCLNWYQRFRII 449
+ ++H N++ L R EF VY ++ L+ I+ + + + +F +I
Sbjct: 72 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF-LI 128
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG 509
+ GL Y+H ++HRD+KP+N+ ++ D K+ DFGLAR D + T V
Sbjct: 129 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVA 181
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
T Y PE+M T D+++ G M E+ +GR
Sbjct: 182 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGI--KEFVAELVS 394
K +++ + +++ +G G +G V + +++AVKK+S + I K EL
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 395 MGRLRHRNLVKLRGY---CRRKGEFLLVY--DYMPNGSLDKILHTNIKPCLNWYQRFRII 449
+ ++H N++ L R EF VY ++ L+ I+ + + + +F +I
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KXQKLTDDHVQF-LI 131
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG 509
+ GL Y+H ++HRD+KP+N+ ++ D K+ DFGLAR D + T V
Sbjct: 132 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD----EMTGYVA 184
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
T Y PE+M T D+++ G M E+ +GR
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGI--KEFVAELVS 394
K +++ + +++ +G G +G V + +++AVKK+S + I K EL
Sbjct: 34 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 93
Query: 395 MGRLRHRNLVKLRGY---CRRKGEFLLVY--DYMPNGSLDKILHTNIKPCLNWYQRFRII 449
+ ++H N++ L R EF VY ++ L+ I+ + + + +F +I
Sbjct: 94 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF-LI 150
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG 509
+ GL Y+H ++HRD+KP+N+ ++ D K+ DFGLAR D + T V
Sbjct: 151 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVA 203
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
T Y PE+M T D+++ G M E+ +GR
Sbjct: 204 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2PEL|A Chain A, Peanut Lectin
pdb|2PEL|B Chain B, Peanut Lectin
pdb|2PEL|C Chain C, Peanut Lectin
pdb|2PEL|D Chain D, Peanut Lectin
pdb|2TEP|A Chain A, Peanut Lectin Complexed With T-antigenic Disaccharide
pdb|2TEP|B Chain B, Peanut Lectin Complexed With T-antigenic Disaccharide
pdb|2TEP|C Chain C, Peanut Lectin Complexed With T-antigenic Disaccharide
pdb|2TEP|D Chain D, Peanut Lectin Complexed With T-antigenic Disaccharide
pdb|1CIW|A Chain A, Peanut Lectin Complexed With N-Acetyllactosamine
pdb|1CIW|B Chain B, Peanut Lectin Complexed With N-Acetyllactosamine
pdb|1CIW|C Chain C, Peanut Lectin Complexed With N-Acetyllactosamine
pdb|1CIW|D Chain D, Peanut Lectin Complexed With N-Acetyllactosamine
pdb|1QF3|A Chain A, Peanut Lectin Complexed With Methyl-Beta-Galactose
pdb|1QF3|B Chain B, Peanut Lectin Complexed With Methyl-Beta-Galactose
pdb|1QF3|C Chain C, Peanut Lectin Complexed With Methyl-Beta-Galactose
pdb|1QF3|D Chain D, Peanut Lectin Complexed With Methyl-Beta-Galactose
pdb|1CR7|A Chain A, Peanut Lectin-Lactose Complex Monoclinic Form
pdb|1CR7|B Chain B, Peanut Lectin-Lactose Complex Monoclinic Form
pdb|1CR7|C Chain C, Peanut Lectin-Lactose Complex Monoclinic Form
pdb|1CR7|D Chain D, Peanut Lectin-Lactose Complex Monoclinic Form
pdb|1CR7|E Chain E, Peanut Lectin-Lactose Complex Monoclinic Form
pdb|1CR7|F Chain F, Peanut Lectin-Lactose Complex Monoclinic Form
pdb|1CR7|G Chain G, Peanut Lectin-Lactose Complex Monoclinic Form
pdb|1CR7|H Chain H, Peanut Lectin-Lactose Complex Monoclinic Form
pdb|1CQ9|A Chain A, Peanut Lectin-Triclinic Form
pdb|1CQ9|B Chain B, Peanut Lectin-Triclinic Form
pdb|1CQ9|C Chain C, Peanut Lectin-Triclinic Form
pdb|1CQ9|D Chain D, Peanut Lectin-Triclinic Form
pdb|1RIR|A Chain A, Crystal Structure Of Meso-Tetrasulphonatophenylporphyrin
In Complex With Peanut Lectin.
pdb|1RIR|B Chain B, Crystal Structure Of Meso-Tetrasulphonatophenylporphyrin
In Complex With Peanut Lectin.
pdb|1RIR|C Chain C, Crystal Structure Of Meso-Tetrasulphonatophenylporphyrin
In Complex With Peanut Lectin.
pdb|1RIR|D Chain D, Crystal Structure Of Meso-Tetrasulphonatophenylporphyrin
In Complex With Peanut Lectin.
pdb|1RIT|A Chain A, Crystal Structure Of Peanut Lectin In Complex With Meso-
Tetrasulphonatophenylporphyrin And Lactose
pdb|1RIT|B Chain B, Crystal Structure Of Peanut Lectin In Complex With Meso-
Tetrasulphonatophenylporphyrin And Lactose
pdb|1RIT|C Chain C, Crystal Structure Of Peanut Lectin In Complex With Meso-
Tetrasulphonatophenylporphyrin And Lactose
pdb|1RIT|D Chain D, Crystal Structure Of Peanut Lectin In Complex With Meso-
Tetrasulphonatophenylporphyrin And Lactose
pdb|2DH1|A Chain A, Crystal Structure Of Peanut Lectin
Lactose-Azobenzene-4,4'- Dicarboxylic Acid-Lactose
Complex
pdb|2DH1|B Chain B, Crystal Structure Of Peanut Lectin
Lactose-Azobenzene-4,4'- Dicarboxylic Acid-Lactose
Complex
pdb|2DH1|C Chain C, Crystal Structure Of Peanut Lectin
Lactose-Azobenzene-4,4'- Dicarboxylic Acid-Lactose
Complex
pdb|2DH1|D Chain D, Crystal Structure Of Peanut Lectin
Lactose-Azobenzene-4,4'- Dicarboxylic Acid-Lactose
Complex
pdb|2DV9|A Chain A, Crystal Structure Of Peanut Lectin Gal-Beta-1,3-Gal
Complex
pdb|2DV9|B Chain B, Crystal Structure Of Peanut Lectin Gal-Beta-1,3-Gal
Complex
pdb|2DV9|C Chain C, Crystal Structure Of Peanut Lectin Gal-Beta-1,3-Gal
Complex
pdb|2DV9|D Chain D, Crystal Structure Of Peanut Lectin Gal-Beta-1,3-Gal
Complex
pdb|2DVA|A Chain A, Crystal Structure Of Peanut Lectin Gal-Beta-1,3-Galnac-
Alpha-O-Me (Methyl-T-Antigen) Complex
pdb|2DVA|B Chain B, Crystal Structure Of Peanut Lectin Gal-Beta-1,3-Galnac-
Alpha-O-Me (Methyl-T-Antigen) Complex
pdb|2DVA|C Chain C, Crystal Structure Of Peanut Lectin Gal-Beta-1,3-Galnac-
Alpha-O-Me (Methyl-T-Antigen) Complex
pdb|2DVA|D Chain D, Crystal Structure Of Peanut Lectin Gal-Beta-1,3-Galnac-
Alpha-O-Me (Methyl-T-Antigen) Complex
pdb|2DVB|A Chain A, Crystal Structure Of Peanut Lectin Gal-Beta-1,6-Galnac
Complex
pdb|2DVB|B Chain B, Crystal Structure Of Peanut Lectin Gal-Beta-1,6-Galnac
Complex
pdb|2DVB|C Chain C, Crystal Structure Of Peanut Lectin Gal-Beta-1,6-Galnac
Complex
pdb|2DVB|D Chain D, Crystal Structure Of Peanut Lectin Gal-Beta-1,6-Galnac
Complex
pdb|2DVD|A Chain A, Crystal Structure Of Peanut Lectin Gal-Alpha-1,3-Gal
Complex
pdb|2DVD|B Chain B, Crystal Structure Of Peanut Lectin Gal-Alpha-1,3-Gal
Complex
pdb|2DVD|C Chain C, Crystal Structure Of Peanut Lectin Gal-Alpha-1,3-Gal
Complex
pdb|2DVD|D Chain D, Crystal Structure Of Peanut Lectin Gal-Alpha-1,3-Gal
Complex
pdb|2DVF|A Chain A, Crystals Of Peanut Lectin Grown In The Presence Of Gal-
Alpha-1,3-Gal-Beta-1,4-Gal
pdb|2DVF|B Chain B, Crystals Of Peanut Lectin Grown In The Presence Of Gal-
Alpha-1,3-Gal-Beta-1,4-Gal
pdb|2DVF|C Chain C, Crystals Of Peanut Lectin Grown In The Presence Of Gal-
Alpha-1,3-Gal-Beta-1,4-Gal
pdb|2DVF|D Chain D, Crystals Of Peanut Lectin Grown In The Presence Of Gal-
Alpha-1,3-Gal-Beta-1,4-Gal
pdb|2DVG|A Chain A, Crystal Structure Of Peanut Lectin Gal-Alpha-1,6-Glc
Complex
pdb|2DVG|B Chain B, Crystal Structure Of Peanut Lectin Gal-Alpha-1,6-Glc
Complex
pdb|2DVG|C Chain C, Crystal Structure Of Peanut Lectin Gal-Alpha-1,6-Glc
Complex
pdb|2DVG|D Chain D, Crystal Structure Of Peanut Lectin Gal-Alpha-1,6-Glc
Complex
Length = 236
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 110/245 (44%), Gaps = 35/245 (14%)
Query: 29 QFIYHGFNE-DAQLQRDGLASVHSNGLLQLTNTVSPQQEGHAFYRLPIK-FNTXXXXXXX 86
F ++ F+E + + G +V SNG +QLTN G Y +P++ +++
Sbjct: 5 SFNFNSFSEGNPAINFQGDVTVLSNGNIQLTNLNKVNSVGRVLYAMPVRIWSSATGNVAS 64
Query: 87 XXXNFVF----------AIGMAFVISPSKDLGKAEASPSEYLGLFNASNNGQSTNHILAI 136
+F F A G+ F I+P A + LG+ + G H + +
Sbjct: 65 FLTSFSFEMKDIKDYDPADGIIFFIAPEDTQIPAGSIGGGTLGVSDTKGAG----HFVGV 120
Query: 137 ELDTVQNLDFDDIDDNHVGIDVNSLISHESAPAAYFSDREGMNKTLELIIGDPIQIWISY 196
E DT N +++D +HVGIDVNS+ S ++ P + G +++ + Y
Sbjct: 121 EFDTYSNSEYNDPPTDHVGIDVNSVDSVKTVP-------------WNSVSGAVVKVTVIY 167
Query: 197 DGAEKLLNVTLAPMSIPKPTKPLLSRAINLSHILLETMYVGFSASTGSL--KSSHYVLGW 254
D + K L+V + + T +++ ++L L E + GFSAS GSL + H + W
Sbjct: 168 DSSTKTLSVAVTNDNGDITT---IAQVVDLKAKLPERVKFGFSAS-GSLGGRQIHLIRSW 223
Query: 255 SFNRS 259
SF +
Sbjct: 224 SFTST 228
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGI--KEFVAELVS 394
K +++ + +++ +G G +G V + +++AVKK+S + I K EL
Sbjct: 35 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 94
Query: 395 MGRLRHRNLVKLRGY---CRRKGEFLLVY--DYMPNGSLDKILHTNIKPCLNWYQRFRII 449
+ ++H N++ L R EF VY ++ L+ I+ + + + +F +I
Sbjct: 95 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF-LI 151
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG 509
+ GL Y+H ++HRD+KP+N+ ++ D K+ DFGLAR D + T V
Sbjct: 152 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVA 204
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
T Y PE+M T D+++ G M E+ +GR
Sbjct: 205 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGI--KEFVAELVS 394
K +++ + +++ +G G +G V + +++AVKK+S + I K EL
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 395 MGRLRHRNLVKLRGY---CRRKGEFLLVY--DYMPNGSLDKILHTNIKPCLNWYQRFRII 449
+ ++H N++ L R EF VY ++ L+ I+ + + + +F +I
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF-LI 127
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG 509
+ GL Y+H ++HRD+KP+N+ ++ D K+ DFGLAR D + T V
Sbjct: 128 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVA 180
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
T Y PE+M T D+++ G M E+ +GR
Sbjct: 181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGI--KEFVAELVS 394
K +++ + +++ +G G +G V + +++AVKK+S + I K EL
Sbjct: 38 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 97
Query: 395 MGRLRHRNLVKLRGY---CRRKGEFLLVY--DYMPNGSLDKILHTNIKPCLNWYQRFRII 449
+ ++H N++ L R EF VY ++ L+ I+ + + + +F +I
Sbjct: 98 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF-LI 154
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG 509
+ GL Y+H ++HRD+KP+N+ ++ D K+ DFGLAR D + T V
Sbjct: 155 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVA 207
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
T Y PE+M T D+++ G M E+ +GR
Sbjct: 208 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGI--KEFVAELVS 394
K +++ + +++ +G G +G V + +++AVKK+S + I K EL
Sbjct: 12 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 71
Query: 395 MGRLRHRNLVKLRGY---CRRKGEFLLVY--DYMPNGSLDKILHTNIKPCLNWYQRFRII 449
+ ++H N++ L R EF VY ++ L+ I+ + + + +F +I
Sbjct: 72 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF-LI 128
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG 509
+ GL Y+H ++HRD+KP+N+ ++ D K+ DFGLAR D + T V
Sbjct: 129 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVA 181
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
T Y PE+M T D+++ G M E+ +GR
Sbjct: 182 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGI--KEFVAELVS 394
K +++ + +++ +G G +G V + +++AVKK+S + I K EL
Sbjct: 27 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 86
Query: 395 MGRLRHRNLVKLRGY---CRRKGEFLLVY--DYMPNGSLDKILHTNIKPCLNWYQRFRII 449
+ ++H N++ L R EF VY ++ L+ I+ + + + +F +I
Sbjct: 87 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF-LI 143
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG 509
+ GL Y+H ++HRD+KP+N+ ++ D K+ DFGLAR D + T V
Sbjct: 144 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVA 196
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
T Y PE+M T D+++ G M E+ +GR
Sbjct: 197 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGI--KEFVAELVS 394
K +++ + +++ +G G +G V + +++AVKK+S + I K EL
Sbjct: 27 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 86
Query: 395 MGRLRHRNLVKLRGY---CRRKGEFLLVY--DYMPNGSLDKILHTNIKPCLNWYQRFRII 449
+ ++H N++ L R EF VY ++ L+ I+ + + + +F +I
Sbjct: 87 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF-LI 143
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG 509
+ GL Y+H ++HRD+KP+N+ ++ D K+ DFGLAR D + T V
Sbjct: 144 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVA 196
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
T Y PE+M T D+++ G M E+ +GR
Sbjct: 197 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGI--KEFVAELVS 394
K +++ + +++ +G G +G V + +++AVKK+S + I K EL
Sbjct: 13 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 72
Query: 395 MGRLRHRNLVKLRGY---CRRKGEFLLVY--DYMPNGSLDKILHTNIKPCLNWYQRFRII 449
+ ++H N++ L R EF VY ++ L+ I+ + + + +F +I
Sbjct: 73 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF-LI 129
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG 509
+ GL Y+H ++HRD+KP+N+ ++ D K+ DFGLAR D + T V
Sbjct: 130 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVA 182
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
T Y PE+M T D+++ G M E+ +GR
Sbjct: 183 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGI--KEFVAELVS 394
K +++ + +++ +G G +G V + +++AVKK+S + I K EL
Sbjct: 26 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 85
Query: 395 MGRLRHRNLVKLRGY---CRRKGEFLLVY--DYMPNGSLDKILHTNIKPCLNWYQRFRII 449
+ ++H N++ L R EF VY ++ L+ I+ + + + +F +I
Sbjct: 86 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF-LI 142
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG 509
+ GL Y+H ++HRD+KP+N+ ++ D K+ DFGLAR D + T V
Sbjct: 143 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVA 195
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
T Y PE+M T D+++ G M E+ +GR
Sbjct: 196 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 94/209 (44%), Gaps = 15/209 (7%)
Query: 352 VIGRGGFGKVY--RGVLAS-NVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRG 408
IG+G F KV R +L V I + + + +++ E+ M L H N+VKL
Sbjct: 22 TIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFE 81
Query: 409 YCRRKGEFLLVYDYMPNGSLDKIL--HTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQV 466
+ L+ +Y G + L H +K +FR I S + Y H+ +
Sbjct: 82 VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEK-EARSKFRQI---VSAVQYCHQ---KR 134
Query: 467 VLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGK-AS 525
++HRD+K N+LLDAD+N K+ DFG + + + G Y PEL + K
Sbjct: 135 IVHRDLKAENLLLDADMNIKIADFGFSN--EFTVGGKLDAFCGAPPYAAPELFQGKKYDG 192
Query: 526 TSTDVYAFGVFMLEVASGRRPVEQQGSME 554
DV++ GV + + SG P + Q E
Sbjct: 193 PEVDVWSLGVILYTLVSGSLPFDGQNLKE 221
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 110/221 (49%), Gaps = 24/221 (10%)
Query: 352 VIGRGGFGKVY--RGVLASN------VQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNL 403
V+G+GG+GKV+ R V +N +++ K + + + AE + ++H +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 404 VKLRGYCRRKGEFLLVYDYMPNGSLDKILHTN---IKPCLNWYQRFRIIRGVASGLLYLH 460
V L + G+ L+ +Y+ G L L ++ +Y + ++ L +LH
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFY-----LAEISMALGHLH 138
Query: 461 EDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHD-TIPQTTKLVGTFGYMDPE-L 518
+ + +++RD+KP N++L+ + KL DFGL + HD T+ T GT YM PE L
Sbjct: 139 Q---KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHT--FCGTIEYMAPEIL 193
Query: 519 MRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLV 559
MR+G + + D ++ G M ++ +G P + +T++ +
Sbjct: 194 MRSGH-NRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKI 233
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 106/229 (46%), Gaps = 32/229 (13%)
Query: 337 YKDLYKATKGFKDKDVIGRGGFGKVYRGVLASN-----VQIAVKKVSHDSKQGIKEFVAE 391
++D+YK T +++G G + KV V N V+I K+ H + +E
Sbjct: 10 FEDMYKLTS-----ELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETL 64
Query: 392 LVSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRG 451
G ++N+++L + F LV++ + GS+ + H + N + R++R
Sbjct: 65 YQCQG---NKNILELIEFFEDDTRFYLVFEKLQGGSI--LAHIQKQKHFNEREASRVVRD 119
Query: 452 VASGLLYLHEDWEQVVLHRDIKPANVLLDADLN---GKLGDFGLARLYDHD------TIP 502
VA+ L +LH + + HRD+KP N+L ++ K+ DF L + T P
Sbjct: 120 VAAALDFLHT---KGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTP 176
Query: 503 QTTKLVGTFGYMDPELMR--TGKAS---TSTDVYAFGVFMLEVASGRRP 546
+ T G+ YM PE++ T +A+ D+++ GV + + SG P
Sbjct: 177 ELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPP 225
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGI--KEFVAELVS 394
K +++ + +++ +G G +G V + +++AVKK+S + I K EL
Sbjct: 27 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRL 86
Query: 395 MGRLRHRNLVKLRGY---CRRKGEFLLVY--DYMPNGSLDKILHTNIKPCLNWYQRFRII 449
+ ++H N++ L R EF VY ++ L+ I+ + + + +F +I
Sbjct: 87 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF-LI 143
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG 509
+ GL Y+H ++HRD+KP+N+ ++ D K+ DFGLAR D + T V
Sbjct: 144 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVA 196
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
T Y PE+M T D+++ G M E+ +GR
Sbjct: 197 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1BZW|A Chain A, Peanut Lectin Complexed With C-Lactose
pdb|1BZW|B Chain B, Peanut Lectin Complexed With C-Lactose
pdb|1BZW|C Chain C, Peanut Lectin Complexed With C-Lactose
pdb|1BZW|D Chain D, Peanut Lectin Complexed With C-Lactose
pdb|1V6I|A Chain A, Peanut Lectin-Lactose Complex In Acidic Ph
pdb|1V6I|B Chain B, Peanut Lectin-Lactose Complex In Acidic Ph
pdb|1V6I|C Chain C, Peanut Lectin-Lactose Complex In Acidic Ph
pdb|1V6I|D Chain D, Peanut Lectin-Lactose Complex In Acidic Ph
pdb|1V6J|A Chain A, Peanut Lectin-Lactose Complex Crystallized In Orthorhombic
Form At Acidic Ph
pdb|1V6J|B Chain B, Peanut Lectin-Lactose Complex Crystallized In Orthorhombic
Form At Acidic Ph
pdb|1V6J|C Chain C, Peanut Lectin-Lactose Complex Crystallized In Orthorhombic
Form At Acidic Ph
pdb|1V6J|D Chain D, Peanut Lectin-Lactose Complex Crystallized In Orthorhombic
Form At Acidic Ph
pdb|1V6K|A Chain A, Peanut Lectin-Lactose Complex In The Presence Of
Peptide(Iwssagnva)
pdb|1V6K|B Chain B, Peanut Lectin-Lactose Complex In The Presence Of
Peptide(Iwssagnva)
pdb|1V6K|C Chain C, Peanut Lectin-Lactose Complex In The Presence Of
Peptide(Iwssagnva)
pdb|1V6K|D Chain D, Peanut Lectin-Lactose Complex In The Presence Of
Peptide(Iwssagnva)
pdb|1V6L|A Chain A, Peanut Lectin-Lactose Complex In The Presence Of 9mer
Peptide (Pviwssatg)
pdb|1V6L|B Chain B, Peanut Lectin-Lactose Complex In The Presence Of 9mer
Peptide (Pviwssatg)
pdb|1V6L|C Chain C, Peanut Lectin-Lactose Complex In The Presence Of 9mer
Peptide (Pviwssatg)
pdb|1V6L|D Chain D, Peanut Lectin-Lactose Complex In The Presence Of 9mer
Peptide (Pviwssatg)
pdb|1V6M|A Chain A, Peanut Lectin With 9mer Peptide (iwssagnva)
pdb|1V6M|B Chain B, Peanut Lectin With 9mer Peptide (iwssagnva)
pdb|1V6M|C Chain C, Peanut Lectin With 9mer Peptide (iwssagnva)
pdb|1V6M|D Chain D, Peanut Lectin With 9mer Peptide (iwssagnva)
pdb|1V6M|E Chain E, Peanut Lectin With 9mer Peptide (iwssagnva)
pdb|1V6M|F Chain F, Peanut Lectin With 9mer Peptide (iwssagnva)
pdb|1V6M|G Chain G, Peanut Lectin With 9mer Peptide (iwssagnva)
pdb|1V6M|H Chain H, Peanut Lectin With 9mer Peptide (iwssagnva)
pdb|1V6N|A Chain A, Peanut Lectin With 9mer Peptide (Pviwssatg)
pdb|1V6N|B Chain B, Peanut Lectin With 9mer Peptide (Pviwssatg)
pdb|1V6N|C Chain C, Peanut Lectin With 9mer Peptide (Pviwssatg)
pdb|1V6N|D Chain D, Peanut Lectin With 9mer Peptide (Pviwssatg)
pdb|1V6N|E Chain E, Peanut Lectin With 9mer Peptide (Pviwssatg)
pdb|1V6N|F Chain F, Peanut Lectin With 9mer Peptide (Pviwssatg)
pdb|1V6N|G Chain G, Peanut Lectin With 9mer Peptide (Pviwssatg)
pdb|1V6N|H Chain H, Peanut Lectin With 9mer Peptide (Pviwssatg)
pdb|1V6O|A Chain A, Peanut Lectin Complexed With 10mer Peptide (Pvriwssatg)
pdb|1V6O|B Chain B, Peanut Lectin Complexed With 10mer Peptide (Pvriwssatg)
pdb|1V6O|C Chain C, Peanut Lectin Complexed With 10mer Peptide (Pvriwssatg)
pdb|1V6O|D Chain D, Peanut Lectin Complexed With 10mer Peptide (Pvriwssatg)
pdb|1V6O|E Chain E, Peanut Lectin Complexed With 10mer Peptide (Pvriwssatg)
pdb|1V6O|F Chain F, Peanut Lectin Complexed With 10mer Peptide (Pvriwssatg)
pdb|1V6O|G Chain G, Peanut Lectin Complexed With 10mer Peptide (Pvriwssatg)
pdb|1V6O|H Chain H, Peanut Lectin Complexed With 10mer Peptide (Pvriwssatg)
Length = 232
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 110/245 (44%), Gaps = 35/245 (14%)
Query: 29 QFIYHGFNE-DAQLQRDGLASVHSNGLLQLTNTVSPQQEGHAFYRLPIK-FNTXXXXXXX 86
F ++ F+E + + G +V SNG +QLTN G Y +P++ +++
Sbjct: 5 SFNFNSFSEGNPAINFQGDVTVLSNGNIQLTNLNKVNSVGRVLYAMPVRIWSSATGNVAS 64
Query: 87 XXXNFVF----------AIGMAFVISPSKDLGKAEASPSEYLGLFNASNNGQSTNHILAI 136
+F F A G+ F I+P A + LG+ + G H + +
Sbjct: 65 FLTSFSFEMKDIKDYDPADGIIFFIAPEDTQIPAGSIGGGTLGVSDTKGAG----HFVGV 120
Query: 137 ELDTVQNLDFDDIDDNHVGIDVNSLISHESAPAAYFSDREGMNKTLELIIGDPIQIWISY 196
E DT N +++D +HVGIDVNS+ S ++ P + G +++ + Y
Sbjct: 121 EFDTYSNSEYNDPPTDHVGIDVNSVDSVKTVP-------------WNSVSGAVVKVTVIY 167
Query: 197 DGAEKLLNVTLAPMSIPKPTKPLLSRAINLSHILLETMYVGFSASTGSL--KSSHYVLGW 254
D + K L+V + + T +++ ++L L E + GFSAS GSL + H + W
Sbjct: 168 DSSTKTLSVAVTNDNGDITT---IAQVVDLKAKLPERVKFGFSAS-GSLGGRQIHLIRSW 223
Query: 255 SFNRS 259
SF +
Sbjct: 224 SFTST 228
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 96/207 (46%), Gaps = 10/207 (4%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDS---KQGIKEFVAELVSMGR-LRHRNLVKLRG 408
+G+GGF K Y ++ KV S K KE ++ +++ + L + ++V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 409 YCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVL 468
+ +V + SL + LH K R+ +R G+ YLH + V+
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARY-FMRQTIQGVQYLHNNR---VI 164
Query: 469 HRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTST 528
HRD+K N+ L+ D++ K+GDFGLA + D + L GT Y+ PE++ S
Sbjct: 165 HRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG-ERKKXLCGTPNYIAPEVLCKKGHSFEV 223
Query: 529 DVYAFGVFMLEVASGRRPVEQQGSMET 555
D+++ G + + G+ P E ET
Sbjct: 224 DIWSLGCILYTLLVGKPPFETSCLKET 250
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGI--KEFVAELVS 394
K +++ + +++ +G G +G V + +++AVKK+S + I K EL
Sbjct: 26 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 85
Query: 395 MGRLRHRNLVKLRGY---CRRKGEFLLVY--DYMPNGSLDKILHTNIKPCLNWYQRFRII 449
+ ++H N++ L R EF VY ++ L+ I+ + + + +F +I
Sbjct: 86 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF-LI 142
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG 509
+ GL Y+H ++HRD+KP+N+ ++ D K+ DFGLAR D + T V
Sbjct: 143 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD----EMTGYVA 195
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
T Y PE+M T D+++ G M E+ +GR
Sbjct: 196 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 113/239 (47%), Gaps = 17/239 (7%)
Query: 332 PQRFTYKDLYKATKGFKDKDV-IGRGGFGKVYRGVL---ASNVQIAVKKVSHDSKQG-IK 386
P+ K L+ D+ +G G FG V +GV + +A+K + +++ +
Sbjct: 322 PEELKDKKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTE 381
Query: 387 EFVAELVSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIK--PCLNWYQ 444
E + E M +L + +V+L G C+ + +LV + G L K L + P N +
Sbjct: 382 EMMREAQIMHQLDNPYIVRLIGVCQAEA-LMLVMEMAGGGPLHKFLVGKREEIPVSNVAE 440
Query: 445 RFRIIRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQT 504
++ V+ G+ YL E + +HR++ NVLL K+ DFGL++ D T
Sbjct: 441 ---LLHQVSMGMKYLEE---KNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYT 494
Query: 505 TKLVGTF--GYMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVD 560
+ G + + PE + K S+ +DV+++GV M E S G++P ++ E + ++
Sbjct: 495 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIE 553
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGI--KEFVAELVS 394
K +++ + ++ +G G +G V + S ++IAVKK+S + I K EL
Sbjct: 44 KTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRL 103
Query: 395 MGRLRHRNLVKLRGY---CRRKGEFLLVY--DYMPNGSLDKILHTNIKPCLNWYQRFRII 449
+ ++H N++ L EF VY ++ L+ I+ + + + +F +I
Sbjct: 104 LKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF-LI 160
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG 509
+ GL Y+H ++HRD+KP+N+ ++ D K+ DFGLAR D + T V
Sbjct: 161 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVA 213
Query: 510 TFGYMDPELMRTG-KASTSTDVYAFGVFMLEVASGR 544
T Y PE+M + + D+++ G M E+ +GR
Sbjct: 214 TRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 96/207 (46%), Gaps = 10/207 (4%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDS---KQGIKEFVAELVSMGR-LRHRNLVKLRG 408
+G+GGF K Y ++ KV S K KE ++ +++ + L + ++V G
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 409 YCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVL 468
+ +V + SL + LH K R+ +R G+ YLH + V+
Sbjct: 94 FFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARY-FMRQTIQGVQYLHNNR---VI 148
Query: 469 HRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTST 528
HRD+K N+ L+ D++ K+GDFGLA + D + L GT Y+ PE++ S
Sbjct: 149 HRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG-ERKKDLCGTPNYIAPEVLCKKGHSFEV 207
Query: 529 DVYAFGVFMLEVASGRRPVEQQGSMET 555
D+++ G + + G+ P E ET
Sbjct: 208 DIWSLGCILYTLLVGKPPFETSCLKET 234
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 96/207 (46%), Gaps = 10/207 (4%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDS---KQGIKEFVAELVSMGR-LRHRNLVKLRG 408
+G+GGF K Y ++ KV S K KE ++ +++ + L + ++V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 409 YCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVL 468
+ +V + SL + LH K R+ +R G+ YLH + V+
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARY-FMRQTIQGVQYLHNNR---VI 164
Query: 469 HRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTST 528
HRD+K N+ L+ D++ K+GDFGLA + D + L GT Y+ PE++ S
Sbjct: 165 HRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG-ERKKDLCGTPNYIAPEVLCKKGHSFEV 223
Query: 529 DVYAFGVFMLEVASGRRPVEQQGSMET 555
D+++ G + + G+ P E ET
Sbjct: 224 DIWSLGCILYTLLVGKPPFETSCLKET 250
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGI--KEFVAELVS 394
K +++ + +++ +G G +G V + +++AVKK+S + I K EL
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 76
Query: 395 MGRLRHRNLVKLRGY---CRRKGEFLLVY--DYMPNGSLDKILHTNIKPCLNWYQRFRII 449
+ ++H N++ L R EF VY ++ L+ I+ + + + +F +I
Sbjct: 77 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF-LI 133
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG 509
+ GL Y+H ++HRD+KP+N+ ++ D K+ DFGLAR D + T V
Sbjct: 134 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDD----EMTGYVA 186
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
T Y PE+M T D+++ G M E+ +GR
Sbjct: 187 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGI--KEFVAELVS 394
K +++ + +++ +G G +G V + +++AVKK+S + I K EL
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 80
Query: 395 MGRLRHRNLVKLRGY---CRRKGEFLLVY--DYMPNGSLDKILHTNIKPCLNWYQRFRII 449
+ ++H N++ L R EF VY ++ L+ I+ + + + +F +I
Sbjct: 81 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF-LI 137
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG 509
+ GL Y+H ++HRD+KP+N+ ++ D K+ DFGLAR D + T V
Sbjct: 138 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDD----EMTGYVA 190
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
T Y PE+M T D+++ G M E+ +GR
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 94/209 (44%), Gaps = 15/209 (7%)
Query: 352 VIGRGGFGKVY--RGVLASNVQIAVKKV--SHDSKQGIKEFVAELVSMGRLRHRNLVKLR 407
IG+G F KV R +L ++AVK + + + +++ E+ L H N+VKL
Sbjct: 21 TIGKGNFAKVKLARHILTGK-EVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLF 79
Query: 408 GYCRRKGEFLLVYDYMPNGSL-DKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQV 466
+ LV +Y G + D ++ +FR I S + Y H+ +
Sbjct: 80 EVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQI---VSAVQYCHQKF--- 133
Query: 467 VLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKAS- 525
++HRD+K N+LLDAD N K+ DFG + + + G Y PEL + K
Sbjct: 134 IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGN--KLDAFCGAPPYAAPELFQGKKYDG 191
Query: 526 TSTDVYAFGVFMLEVASGRRPVEQQGSME 554
DV++ GV + + SG P + Q E
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFDGQNLKE 220
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 96/203 (47%), Gaps = 16/203 (7%)
Query: 353 IGRGGFGKVYRGVLAS--------NVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLV 404
+G+G F K+++GV ++ +K + + + F M +L H++LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 405 KLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWE 464
G C E +LV +++ GSLD L N K C+N + + + +A+ + +L E+
Sbjct: 76 LNYGVCVCGDENILVQEFVKFGSLDTYLKKN-KNCINILWKLEVAKQLAAAMHFLEEN-- 132
Query: 465 QVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHD---TIPQTTKLVGTFGYMDPELMRT 521
++H ++ N+LL + + K G+ +L D T+ L ++ PE +
Sbjct: 133 -TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECIEN 191
Query: 522 GK-ASTSTDVYAFGVFMLEVASG 543
K + +TD ++FG + E+ SG
Sbjct: 192 PKNLNLATDKWSFGTTLWEICSG 214
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 108/220 (49%), Gaps = 22/220 (10%)
Query: 352 VIGRGGFGKVY--RGVLASN------VQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNL 403
V+G+GG+GKV+ R V +N +++ K + + + AE + ++H +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 404 VKLRGYCRRKGEFLLVYDYMPNGSLDKILHTN---IKPCLNWYQRFRIIRGVASGLLYLH 460
V L + G+ L+ +Y+ G L L ++ +Y + ++ L +LH
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFY-----LAEISMALGHLH 138
Query: 461 EDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPE-LM 519
+ + +++RD+KP N++L+ + KL DFGL + HD T GT YM PE LM
Sbjct: 139 Q---KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-VTHXFCGTIEYMAPEILM 194
Query: 520 RTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLV 559
R+G + + D ++ G M ++ +G P + +T++ +
Sbjct: 195 RSGH-NRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKI 233
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 103/207 (49%), Gaps = 19/207 (9%)
Query: 352 VIGRGGFGKVYRGVL----ASNVQIAVK--KVSHDSKQGIKEFVAELVSMGRLRHRNLVK 405
++G G FG V G L +++++AVK K+ + S++ I+EF++E M H N+++
Sbjct: 41 ILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIR 100
Query: 406 LRGYCRRKG-----EFLLVYDYMPNGSLDK-ILHTNIKPC---LNWYQRFRIIRGVASGL 456
L G C + +++ +M G L +L++ ++ + + + +A G+
Sbjct: 101 LLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGM 160
Query: 457 LYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLA-RLYDHDTIPQTTKLVGTFGYMD 515
YL + LHRD+ N +L D+ + DFGL+ ++Y D Q ++
Sbjct: 161 EYLS---NRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIA 217
Query: 516 PELMRTGKASTSTDVYAFGVFMLEVAS 542
E + ++ +DV+AFGV M E+A+
Sbjct: 218 IESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGI--KEFVAELVS 394
K +++ + +++ +G G +G V + +++AVKK+S + I K EL
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 395 MGRLRHRNLVKLRGY---CRRKGEFLLVY--DYMPNGSLDKILHTNIKPCLNWYQRFRII 449
+ ++H N++ L R EF VY ++ L+ I+ + + + +F +I
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF-LI 131
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG 509
+ GL Y+H ++HRD+KP+N+ ++ D K+ D+GLAR D + T V
Sbjct: 132 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDYGLARHTDD----EMTGYVA 184
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
T Y PE+M T D+++ G M E+ +GR
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 99/212 (46%), Gaps = 16/212 (7%)
Query: 345 KGFKDKDVIGRGGFGKVY--RGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRN 402
K F +V+G G F +V+ + L + A+K + E+ + +++H N
Sbjct: 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKL-FALKCIKKSPAFRDSSLENEIAVLKKIKHEN 67
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSL-DKILHTNIKPCLNWYQRFRIIRGVASGLLYLHE 461
+V L + LV + G L D+IL + +I+ V S + YLHE
Sbjct: 68 IVTLEDIYESTTHYYLVMQLVSGGELFDRILERGV---YTEKDASLVIQQVLSAVKYLHE 124
Query: 462 DWEQVVLHRDIKPANVL-LDADLNGKL--GDFGLARLYDHDTIPQTTKLVGTFGYMDPEL 518
+ ++HRD+KP N+L L + N K+ DFGL+++ + + I T GT GY+ PE+
Sbjct: 125 NG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKM-EQNGIMSTA--CGTPGYVAPEV 178
Query: 519 MRTGKASTSTDVYAFGVFMLEVASGRRPVEQQ 550
+ S + D ++ GV + G P ++
Sbjct: 179 LAQKPYSKAVDCWSIGVITYILLCGYPPFYEE 210
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 105/215 (48%), Gaps = 23/215 (10%)
Query: 340 LYKATKGFKDKDVIGRGGFGKVYRGVL-----ASNVQIAVKKVSHDS-KQGIKEFVAELV 393
++K T+ K K V+G G FG V++GV + + + +K + S +Q + ++
Sbjct: 27 IFKETELRKLK-VLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHML 85
Query: 394 SMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSL-DKILHTN--IKP--CLNWYQRFRI 448
++G L H ++V+L G C LV Y+P GSL D + + P LNW +
Sbjct: 86 AIGSLDHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQ--- 141
Query: 449 IRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLV 508
+A G+ YL E ++HR++ NVLL + ++ DFG+A L D
Sbjct: 142 ---IAKGMYYLEE---HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEA 195
Query: 509 GT-FGYMDPELMRTGKASTSTDVYAFGVFMLEVAS 542
T +M E + GK + +DV+++GV + E+ +
Sbjct: 196 KTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 104/216 (48%), Gaps = 19/216 (8%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGI--KEFVAELVS 394
K +++ + +++ +G G +G V + ++AVKK+S + I K EL
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 395 MGRLRHRNLVKLRGY---CRRKGEFLLVY--DYMPNGSLDKILHTNIKPCLNWYQRFRII 449
+ ++H N++ L R EF VY ++ L+ I+ + + + +F +I
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF-LI 131
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG 509
+ GL Y+H ++HRD+KP+N+ ++ D K+ DFGLAR D + T V
Sbjct: 132 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVA 184
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
T Y PE+M T D+++ G M E+ +GR
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 104/216 (48%), Gaps = 19/216 (8%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGI--KEFVAELVS 394
K +++ + +++ +G G +G V + ++AVKK+S + I K EL
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 80
Query: 395 MGRLRHRNLVKLRGY---CRRKGEFLLVY--DYMPNGSLDKILHTNIKPCLNWYQRFRII 449
+ ++H N++ L R EF VY ++ L+ I+ + + + +F +I
Sbjct: 81 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF-LI 137
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG 509
+ GL Y+H ++HRD+KP+N+ ++ D K+ DFGLAR D + T V
Sbjct: 138 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVA 190
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
T Y PE+M T D+++ G M E+ +GR
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 107/232 (46%), Gaps = 26/232 (11%)
Query: 347 FKDKDVIGRGGFGKVYRGVLAS-NVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVK 405
+ D +G GG G V+ V + ++A+KK+ Q +K + E+ + RL H N+VK
Sbjct: 13 YMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVK 72
Query: 406 L--------------RGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRG 451
+ G +V +YM L +L P L + R + +
Sbjct: 73 VFEILGPSGSQLTDDVGSLTELNSVYIVQEYM-ETDLANVLEQG--PLLEEHARLFMYQ- 128
Query: 452 VASGLLYLHEDWEQVVLHRDIKPANVLLDA-DLNGKLGDFGLARLYD--HDTIPQTTKLV 508
+ GL Y+H VLHRD+KPAN+ ++ DL K+GDFGLAR+ D + ++ +
Sbjct: 129 LLRGLKYIH---SANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGL 185
Query: 509 GTFGYMDPELMRTGKAST-STDVYAFGVFMLEVASGRRPVEQQGSMETVNLV 559
T Y P L+ + T + D++A G E+ +G+ +E + L+
Sbjct: 186 VTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLI 237
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 94/198 (47%), Gaps = 15/198 (7%)
Query: 353 IGRGGFGKV---YRGVLASNVQ--IAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLR 407
+G+G FG V L N +AVK++ H ++F E+ + L +VK R
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 408 G--YCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQ 465
G Y + E LV +Y+P+G L L + + L+ + + G+ YL +
Sbjct: 75 GVSYGPGRPELRLVMEYLPSGCLRDFLQRH-RARLDASRLLLYSSQICKGMEYLGS---R 130
Query: 466 VVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG---TFGYMDPELMRTG 522
+HRD+ N+L++++ + K+ DFGLA+L D + G F Y PE +
Sbjct: 131 RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYA-PESLSDN 189
Query: 523 KASTSTDVYAFGVFMLEV 540
S +DV++FGV + E+
Sbjct: 190 IFSRQSDVWSFGVVLYEL 207
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 104/215 (48%), Gaps = 23/215 (10%)
Query: 340 LYKATKGFKDKDVIGRGGFGKVYRGVL-----ASNVQIAVKKVSHDS-KQGIKEFVAELV 393
++K T+ + V+G G FG V++GV + + + +K + S +Q + ++
Sbjct: 9 IFKETE-LRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHML 67
Query: 394 SMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSL-DKILHTN--IKP--CLNWYQRFRI 448
++G L H ++V+L G C LV Y+P GSL D + + P LNW +
Sbjct: 68 AIGSLDHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQ--- 123
Query: 449 IRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLV 508
+A G+ YL E ++HR++ NVLL + ++ DFG+A L D
Sbjct: 124 ---IAKGMYYLEE---HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEA 177
Query: 509 GT-FGYMDPELMRTGKASTSTDVYAFGVFMLEVAS 542
T +M E + GK + +DV+++GV + E+ +
Sbjct: 178 KTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 104/216 (48%), Gaps = 19/216 (8%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGI--KEFVAELVS 394
K +++ + +++ +G G +G V + ++AVKK+S + I K EL
Sbjct: 35 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 94
Query: 395 MGRLRHRNLVKLRGY---CRRKGEFLLVY--DYMPNGSLDKILHTNIKPCLNWYQRFRII 449
+ ++H N++ L R EF VY ++ L+ I+ + + + +F +I
Sbjct: 95 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF-LI 151
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG 509
+ GL Y+H ++HRD+KP+N+ ++ D K+ DFGLAR D + T V
Sbjct: 152 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVA 204
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
T Y PE+M T D+++ G M E+ +GR
Sbjct: 205 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 104/216 (48%), Gaps = 19/216 (8%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGI--KEFVAELVS 394
K +++ + +++ +G G +G V + ++AVKK+S + I K EL
Sbjct: 34 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 93
Query: 395 MGRLRHRNLVKLRGY---CRRKGEFLLVY--DYMPNGSLDKILHTNIKPCLNWYQRFRII 449
+ ++H N++ L R EF VY ++ L+ I+ + + + +F +I
Sbjct: 94 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF-LI 150
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG 509
+ GL Y+H ++HRD+KP+N+ ++ D K+ DFGLAR D + T V
Sbjct: 151 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVA 203
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
T Y PE+M T D+++ G M E+ +GR
Sbjct: 204 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 105/216 (48%), Gaps = 19/216 (8%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGI--KEFVAELVS 394
K +++ + +++ +G G +G V + +++AVKK+S + I K EL
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 395 MGRLRHRNLVKLRGY---CRRKGEFLLVY--DYMPNGSLDKILHTNIKPCLNWYQRFRII 449
+ ++H N++ L R EF VY ++ L+ I+ + + + + +F +I
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKS--QKLTDDHVQF-LI 131
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG 509
+ GL Y+H ++HRD+KP+N+ ++ D K+ DFGL R D + T V
Sbjct: 132 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDD----EMTGYVA 184
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
T Y PE+M T D+++ G M E+ +GR
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 117/269 (43%), Gaps = 30/269 (11%)
Query: 347 FKDKDVIGRGGFGKVYRGVLASNVQI-AVKKVSHDSKQGIKEFVAELVSMGRL----RHR 401
F+ ++G+G FGKV+ Q A+K + D + +V L H
Sbjct: 20 FELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 79
Query: 402 NLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRG------VASG 455
L + + K V +Y+ G L +I+ C +F + R + G
Sbjct: 80 FLTHMFCTFQTKENLFFVMEYLNGGDL----MYHIQSC----HKFDLSRATFYAAEIILG 131
Query: 456 LLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR---LYDHDTIPQTTKLVGTFG 512
L +LH + +++RD+K N+LLD D + K+ DFG+ + L D +T + GT
Sbjct: 132 LQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD----AKTNEFCGTPD 184
Query: 513 YMDPELMRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWVCDCWKKGAIR 572
Y+ PE++ K + S D ++FGV + E+ G+ P Q E + + + + +
Sbjct: 185 YIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEK 244
Query: 573 DASDSRLEGICEEKQMELVLKLGLFCSHP 601
+A D ++ E + L ++ G HP
Sbjct: 245 EAKDLLVKLFVREPEKRLGVR-GDIRQHP 272
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 94/215 (43%), Gaps = 28/215 (13%)
Query: 352 VIGRGGFGKVYR------GVLASNVQIAVKKVSHDSKQGIKE-FVAELVSMGRL-RHRNL 403
+G G FGKV G + +++AVK + + KE ++EL M L +H N+
Sbjct: 53 TLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENI 112
Query: 404 VKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQR--------------FRII 449
V L G C G L++ +Y G L L P L +
Sbjct: 113 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFS 172
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR--LYDHDTIPQTTKL 507
VA G+ +L + +HRD+ NVLL K+GDFGLAR + D + I +
Sbjct: 173 SQVAQGMAFLAS---KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 229
Query: 508 VGTFGYMDPELMRTGKASTSTDVYAFGVFMLEVAS 542
+ +M PE + + +DV+++G+ + E+ S
Sbjct: 230 L-PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 104/212 (49%), Gaps = 29/212 (13%)
Query: 351 DVIGRGGFGKVYRGVLASNVQIAVKKVS-HDSKQGIKEFVAELVSMGRLRHRNLVKL--R 407
+ +G+G +G+V+RG L +AVK S D + +E E+ + LRH N++
Sbjct: 14 ECVGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFRE--TEIYNTVLLRHDNILGFIAS 70
Query: 408 GYCRRKG--EFLLVYDYMPNGSL-DKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDW- 463
R + L+ Y +GSL D + ++P L R+ A GL +LH +
Sbjct: 71 DMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLA----LRLAVSAACGLAHLHVEIF 126
Query: 464 ----EQVVLHRDIKPANVLLDADLNGKLGDFGLARLY----DHDTIPQTTKLVGTFGYMD 515
+ + HRD K NVL+ ++L + D GLA ++ D+ I + VGT YM
Sbjct: 127 GTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPR-VGTKRYMA 185
Query: 516 PELM----RTG--KASTSTDVYAFGVFMLEVA 541
PE++ RT ++ TD++AFG+ + E+A
Sbjct: 186 PEVLDEQIRTDCFESYKWTDIWAFGLVLWEIA 217
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 104/216 (48%), Gaps = 19/216 (8%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGI--KEFVAELVS 394
K +++ + +++ +G G +G V + ++AVKK+S + I K EL
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 395 MGRLRHRNLVKLRGY---CRRKGEFLLVY--DYMPNGSLDKILHTNIKPCLNWYQRFRII 449
+ ++H N++ L R EF VY ++ L+ I+ + + + +F +I
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF-LI 127
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG 509
+ GL Y+H ++HRD+KP+N+ ++ D K+ DFGLAR D + T V
Sbjct: 128 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVA 180
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
T Y PE+M T D+++ G M E+ +GR
Sbjct: 181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 104/216 (48%), Gaps = 19/216 (8%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGI--KEFVAELVS 394
K +++ + +++ +G G +G V + ++AVKK+S + I K EL
Sbjct: 25 KTIWEVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 84
Query: 395 MGRLRHRNLVKLRGY---CRRKGEFLLVY--DYMPNGSLDKILHTNIKPCLNWYQRFRII 449
+ ++H N++ L R EF VY ++ L+ I+ + + + +F +I
Sbjct: 85 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF-LI 141
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG 509
+ GL Y+H ++HRD+KP+N+ ++ D K+ DFGLAR D + T V
Sbjct: 142 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVA 194
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
T Y PE+M T D+++ G M E+ +GR
Sbjct: 195 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 19/216 (8%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGI--KEFVAELVS 394
K +++ + +++ +G G +G V + +++AVKK+S + I K EL
Sbjct: 38 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 97
Query: 395 MGRLRHRNLVKLRGY---CRRKGEFLLVY--DYMPNGSLDKILHTNIKPCLNWYQRFRII 449
+ ++H N++ L R EF VY ++ L+ I+ + + + +F +I
Sbjct: 98 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF-LI 154
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG 509
+ GL Y+H ++HRD+KP+N+ ++ D K+ DFGLAR D + V
Sbjct: 155 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMXGYVA 207
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
T Y PE+M T D+++ G M E+ +GR
Sbjct: 208 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 95/203 (46%), Gaps = 16/203 (7%)
Query: 353 IGRGGFGKVYRGVLAS--------NVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLV 404
+G+G F K+++GV ++ +K + + + F M +L H++LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 405 KLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWE 464
G C E +LV +++ GSLD L N K C+N + + + +A + +L E+
Sbjct: 76 LNYGVCFCGDENILVQEFVKFGSLDTYLKKN-KNCINILWKLEVAKQLAWAMHFLEEN-- 132
Query: 465 QVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHD---TIPQTTKLVGTFGYMDPELMRT 521
++H ++ N+LL + + K G+ +L D T+ L ++ PE +
Sbjct: 133 -TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECIEN 191
Query: 522 GK-ASTSTDVYAFGVFMLEVASG 543
K + +TD ++FG + E+ SG
Sbjct: 192 PKNLNLATDKWSFGTTLWEICSG 214
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 95/212 (44%), Gaps = 14/212 (6%)
Query: 350 KDVIGRGGFGKVYRGVL-ASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRG 408
++ IGRG +G+V V + ++ A KK+ + + F E+ M L H N+++L
Sbjct: 14 ENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYE 73
Query: 409 YCRRKGEFLLVYDYMPNGSL-DKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVV 467
+ LV + G L ++++H + RI++ V S + Y H + V
Sbjct: 74 TFEDNTDIYLVMELCTGGELFERVVHKRV---FRESDAARIMKDVLSAVAYCH---KLNV 127
Query: 468 LHRDIKPANVLL---DADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKA 524
HRD+KP N L D KL DFGLA + + +T VGT Y+ P+++ G
Sbjct: 128 AHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK--VGTPYYVSPQVLE-GLY 184
Query: 525 STSTDVYAFGVFMLEVASGRRPVEQQGSMETV 556
D ++ GV M + G P E +
Sbjct: 185 GPECDEWSAGVMMYVLLCGYPPFSAPTDXEVM 216
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 94/213 (44%), Gaps = 31/213 (14%)
Query: 351 DVIGRGGFGKVYRGVLASNVQIAVKKVS-HDSKQGIKEFVAELVSMGRLRHRNLVKLRGY 409
+ +G+G +G+V+RG +AVK S D K +E EL + LRH N++ G+
Sbjct: 14 ECVGKGRYGEVWRGSWQGE-NVAVKIFSSRDEKSWFRE--TELYNTVMLRHENIL---GF 67
Query: 410 C-------RRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLH-- 460
+ L+ Y GSL L L+ RI+ +ASGL +LH
Sbjct: 68 IASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT---LDTVSCLRIVLSIASGLAHLHIE 124
Query: 461 ---EDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIP---QTTKLVGTFGYM 514
+ + HRD+K N+L+ + + D GLA ++ T VGT YM
Sbjct: 125 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYM 184
Query: 515 DPELMRTG------KASTSTDVYAFGVFMLEVA 541
PE++ + D++AFG+ + EVA
Sbjct: 185 APEVLDETIQVDCFDSYKRVDIWAFGLVLWEVA 217
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 94/213 (44%), Gaps = 31/213 (14%)
Query: 351 DVIGRGGFGKVYRGVLASNVQIAVKKVS-HDSKQGIKEFVAELVSMGRLRHRNLVKLRGY 409
+ +G+G +G+V+RG +AVK S D K +E EL + LRH N++ G+
Sbjct: 14 ECVGKGRYGEVWRGSWQGE-NVAVKIFSSRDEKSWFRE--TELYNTVMLRHENIL---GF 67
Query: 410 C-------RRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLH-- 460
+ L+ Y GSL L L+ RI+ +ASGL +LH
Sbjct: 68 IASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT---LDTVSCLRIVLSIASGLAHLHIE 124
Query: 461 ---EDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIP---QTTKLVGTFGYM 514
+ + HRD+K N+L+ + + D GLA ++ T VGT YM
Sbjct: 125 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYM 184
Query: 515 DPELMRTG------KASTSTDVYAFGVFMLEVA 541
PE++ + D++AFG+ + EVA
Sbjct: 185 APEVLDETIQVDCFDSYKRVDIWAFGLVLWEVA 217
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 93/207 (44%), Gaps = 26/207 (12%)
Query: 353 IGRGGFGKVYRGV-------LASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVK 405
IG+G F V R V A+ + I KK+S Q + E A + + L+H N+V+
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKI-INTKKLSARDHQKL-EREARICRL--LKHSNIVR 67
Query: 406 LRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRF---RIIRGVASGLLYLHED 462
L +G LV+D + G L + + +Y I+ + +L+ H+
Sbjct: 68 LHDSISEEGFHYLVFDLVTGGELFEDIVAR-----EYYSEADASHCIQQILEAVLHCHQ- 121
Query: 463 WEQVVLHRDIKPANVLLDADLNG---KLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELM 519
V+HRD+KP N+LL + G KL DFGLA D GT GY+ PE++
Sbjct: 122 --MGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQ-QAWFGFAGTPGYLSPEVL 178
Query: 520 RTGKASTSTDVYAFGVFMLEVASGRRP 546
R D++A GV + + G P
Sbjct: 179 RKEAYGKPVDIWACGVILYILLVGYPP 205
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 97/219 (44%), Gaps = 33/219 (15%)
Query: 351 DVIGRGGFGKVYRGVLASNVQIAVKKVS-HDSKQGIKEFVAELVSMGRLRHRNLVKLRGY 409
+ +G+G +G+V+RG +AVK S D K +E EL + LRH N++ G+
Sbjct: 43 ECVGKGRYGEVWRGSWQGE-NVAVKIFSSRDEKSWFRE--TELYNTVMLRHENIL---GF 96
Query: 410 C-------RRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLH-- 460
+ L+ Y GSL L L+ RI+ +ASGL +LH
Sbjct: 97 IASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT---LDTVSCLRIVLSIASGLAHLHIE 153
Query: 461 ---EDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIP---QTTKLVGTFGYM 514
+ + HRD+K N+L+ + + D GLA ++ T VGT YM
Sbjct: 154 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYM 213
Query: 515 DPELMRTG------KASTSTDVYAFGVFMLEVASGRRPV 547
PE++ + D++AFG+ + EVA RR V
Sbjct: 214 APEVLDETIQVDCFDSYKRVDIWAFGLVLWEVA--RRMV 250
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 97/213 (45%), Gaps = 26/213 (12%)
Query: 352 VIGRGGFGKVYR------GVLASNVQIAVKKVSHDSKQGIKE-FVAELVSMGRL-RHRNL 403
+G G FGKV G + +++AVK + + KE ++EL M L +H N+
Sbjct: 53 TLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENI 112
Query: 404 VKLRGYCRRKGEFLLVYDYMPNGSL-------DKILHTN-----IKPCLNWYQRFRIIRG 451
V L G C G L++ +Y G L ++L T+ L+
Sbjct: 113 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQ 172
Query: 452 VASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR--LYDHDTIPQTTKLVG 509
VA G+ +L + +HRD+ NVLL K+GDFGLAR + D + I + +
Sbjct: 173 VAQGMAFLAS---KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 229
Query: 510 TFGYMDPELMRTGKASTSTDVYAFGVFMLEVAS 542
+M PE + + +DV+++G+ + E+ S
Sbjct: 230 V-KWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 93/206 (45%), Gaps = 24/206 (11%)
Query: 353 IGRGGFGKVYRGVLASNVQ------IAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKL 406
+G+G F V R V Q I KK+S Q + E A + + L+H N+V+L
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKL-EREARICRL--LKHPNIVRL 86
Query: 407 RGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRF---RIIRGVASGLLYLHEDW 463
+G L++D + G L + + +Y I+ + +L+ H+
Sbjct: 87 HDSISEEGHHYLIFDLVTGGELFEDIVAR-----EYYSEADASHCIQQILEAVLHCHQ-- 139
Query: 464 EQVVLHRDIKPANVLLDADLNG---KLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMR 520
V+HRD+KP N+LL + L G KL DFGLA + + GT GY+ PE++R
Sbjct: 140 -MGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ-QAWFGFAGTPGYLSPEVLR 197
Query: 521 TGKASTSTDVYAFGVFMLEVASGRRP 546
D++A GV + + G P
Sbjct: 198 KDPYGKPVDLWACGVILYILLVGYPP 223
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGI--KEFVAELVS 394
K +++ + +++ +G G +G V + ++AVKK+S + I K EL
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 395 MGRLRHRNLVKLRGY---CRRKGEFLLVY--DYMPNGSLDKILHTNIKPCLNWYQRFRII 449
+ ++H N++ L R EF VY ++ L+ I+ + + + +F +I
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF-LI 131
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG 509
+ GL Y+H ++HRD+KP+N+ ++ D K+ DFGLAR D + V
Sbjct: 132 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMAGFVA 184
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
T Y PE+M T D+++ G M E+ +GR
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 95/212 (44%), Gaps = 14/212 (6%)
Query: 350 KDVIGRGGFGKVYRGVL-ASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRG 408
++ IGRG +G+V V + ++ A KK+ + + F E+ M L H N+++L
Sbjct: 31 ENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYE 90
Query: 409 YCRRKGEFLLVYDYMPNGSL-DKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVV 467
+ LV + G L ++++H + RI++ V S + Y H + V
Sbjct: 91 TFEDNTDIYLVMELCTGGELFERVVHKRV---FRESDAARIMKDVLSAVAYCH---KLNV 144
Query: 468 LHRDIKPANVLL---DADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKA 524
HRD+KP N L D KL DFGLA + + +T VGT Y+ P+++ G
Sbjct: 145 AHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK--VGTPYYVSPQVLE-GLY 201
Query: 525 STSTDVYAFGVFMLEVASGRRPVEQQGSMETV 556
D ++ GV M + G P E +
Sbjct: 202 GPECDEWSAGVMMYVLLCGYPPFSAPTDXEVM 233
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 100/228 (43%), Gaps = 15/228 (6%)
Query: 347 FKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGI-KEFVAELVSMGRLRHRNLV 404
KDK +G G F + V SN AVK +S + KE A + G H N+V
Sbjct: 14 LKDKP-LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEG---HPNIV 69
Query: 405 KLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWE 464
KL + LV + + G L + + K + + I+R + S + ++H+
Sbjct: 70 KLHEVFHDQLHTFLVMELLNGGELFERIKK--KKHFSETEASYIMRKLVSAVSHMHDVG- 126
Query: 465 QVVLHRDIKPANVLL---DADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRT 521
V+HRD+KP N+L + +L K+ DFG ARL D P T T Y PEL+
Sbjct: 127 --VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF-TLHYAAPELLNQ 183
Query: 522 GKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWVCDCWKKG 569
S D+++ GV + + SG+ P + T + KKG
Sbjct: 184 NGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKG 231
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 116/259 (44%), Gaps = 39/259 (15%)
Query: 342 KATKGFKDKDVIGRGGFGKVYRGVLASN-VQIAVKKVSHDSKQGIKEFVAELVSMGRLRH 400
K F+ + + G+G FG V G S + +A+KKV D + +E + + L H
Sbjct: 20 KEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQI-MQDLAVLHH 78
Query: 401 RNLVKLRGYCRRKGE-------FLLVYDYMPNGSLDKILHTNIKPCLNWYQR-------- 445
N+V+L+ Y GE +V +Y+P+ LH + C N+Y+R
Sbjct: 79 PNIVQLQSYFYTLGERDRRDIYLNVVMEYVPD-----TLH---RCCRNYYRRQVAPPPIL 130
Query: 446 -----FRIIRGVASGLLYLHEDWEQVVLHRDIKPANVLL-DADLNGKLGDFGLARLYDHD 499
F++IR + G L+L V HRDIKP NVL+ +AD KL DFG A+
Sbjct: 131 IKVFLFQLIRSI--GCLHLPS---VNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLS-P 184
Query: 500 TIPQTTKLVGTFGYMDPELMRTGKA-STSTDVYAFGVFMLEVASGRRPVEQQGSMETVNL 558
+ P + + Y PEL+ + +T+ D+++ G E+ G S ++
Sbjct: 185 SEPNVAYICSRY-YRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHE 243
Query: 559 VDWVCDCWKKGAIRDASDS 577
+ V C + +R + S
Sbjct: 244 IVRVLGCPSREVLRKLNPS 262
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGI--KEFVAELVS 394
K +++ + +++ +G G +G V + ++AVKK+S + I K EL
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 395 MGRLRHRNLVKLRGY---CRRKGEFLLVY--DYMPNGSLDKILHTNIKPCLNWYQRFRII 449
+ ++H N++ L R EF VY ++ L+ I+ + + + +F +I
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF-LI 131
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG 509
+ GL Y+H ++HRD+KP+N+ ++ D K+ DFGLAR D + V
Sbjct: 132 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMAGFVA 184
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
T Y PE+M T D+++ G M E+ +GR
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 92/209 (44%), Gaps = 29/209 (13%)
Query: 353 IGRGGFGKVYRGV-LASNVQIAV-----KKVSHDSKQGIKEFVAELVSMGRLRHRNLVKL 406
IGRG F VY+G+ + V++A +K++ +Q KE E + L+H N+V+
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKE---EAEXLKGLQHPNIVRF 90
Query: 407 ----RGYCRRKGEFLLVYDYMPNGSLDKILH----TNIKPCLNWYQRFRIIRGVASGLLY 458
+ K +LV + +G+L L IK +W R + GL +
Sbjct: 91 YDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSW------CRQILKGLQF 144
Query: 459 LHEDWEQVVLHRDIKPANVLLDADLNG-KLGDFGLARLYDHDTIPQTTKLVGTFGYMDPE 517
LH ++ HRD+K N+ + K+GD GLA L ++GT + PE
Sbjct: 145 LHTRTPPII-HRDLKCDNIFITGPTGSVKIGDLGLATLKRASF---AKAVIGTPEFXAPE 200
Query: 518 LMRTGKASTSTDVYAFGVFMLEVASGRRP 546
K S DVYAFG LE A+ P
Sbjct: 201 XYEE-KYDESVDVYAFGXCXLEXATSEYP 228
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 114/264 (43%), Gaps = 30/264 (11%)
Query: 352 VIGRGGFGKVYRGVLASNVQI-AVKKVSHDSKQGIKEFVAELVSMGRL----RHRNLVKL 406
++G+G FGKV+ Q A+K + D + +V L H L +
Sbjct: 24 MLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHM 83
Query: 407 RGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRG------VASGLLYLH 460
+ K V +Y+ G L +I+ C +F + R + GL +LH
Sbjct: 84 FCTFQTKENLFFVMEYLNGGDL----MYHIQSC----HKFDLSRATFYAAEIILGLQFLH 135
Query: 461 EDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR---LYDHDTIPQTTKLVGTFGYMDPE 517
+ +++RD+K N+LLD D + K+ DFG+ + L D +T GT Y+ PE
Sbjct: 136 S---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD----AKTNXFCGTPDYIAPE 188
Query: 518 LMRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVDWVCDCWKKGAIRDASDS 577
++ K + S D ++FGV + E+ G+ P Q E + + + + ++A D
Sbjct: 189 ILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDL 248
Query: 578 RLEGICEEKQMELVLKLGLFCSHP 601
++ E + L ++ G HP
Sbjct: 249 LVKLFVREPEKRLGVR-GDIRQHP 271
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 100/226 (44%), Gaps = 15/226 (6%)
Query: 328 REYGPQRFTYKDLYKATKG-FKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGI 385
RE G ++K + K F+ K+ +G G F +V A+ AVK + + +G
Sbjct: 4 RENGESSSSWKKQAEDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGK 63
Query: 386 KEFVA-ELVSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSL-DKILHTNIKPCLNWY 443
+ + E+ + +++H N+V L LV + G L D+I+ K
Sbjct: 64 ESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVE---KGFYTEK 120
Query: 444 QRFRIIRGVASGLLYLHEDWEQVVLHRDIKPANVLL---DADLNGKLGDFGLARLYDHDT 500
+IR V + YLH ++HRD+KP N+L D + + DFGL+++
Sbjct: 121 DASTLIRQVLDAVYYLHR---MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD 177
Query: 501 IPQTTKLVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEVASGRRP 546
+ T GT GY+ PE++ S + D ++ GV + G P
Sbjct: 178 VMSTA--CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 221
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGI--KEFVAELVS 394
K +++ + +++ +G G +G V + ++AVKK+S + I K EL
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 395 MGRLRHRNLVKLRGY---CRRKGEFLLVY--DYMPNGSLDKILHTNIKPCLNWYQRFRII 449
+ ++H N++ L R EF VY ++ L+ I+ + + +F +I
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCAKLTDDHVQF-LI 127
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG 509
+ GL Y+H ++HRD+KP+N+ ++ D K+ DFGLAR D + T V
Sbjct: 128 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVA 180
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
T Y PE+M T D+++ G M E+ +GR
Sbjct: 181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 19/216 (8%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGI--KEFVAELVS 394
K +++ + +++ +G G +G V + +++AVKK+S + I K EL
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 395 MGRLRHRNLVKLRGY---CRRKGEFLLVY--DYMPNGSLDKILHTNIKPCLNWYQRFRII 449
+ ++H N++ L R EF VY ++ L+ I+ + + + +F +I
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF-LI 131
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG 509
+ GL Y+H ++HRD+KP+N+ ++ D K+ FGLAR D + T V
Sbjct: 132 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILGFGLARHTDD----EMTGYVA 184
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
T Y PE+M T D+++ G M E+ +GR
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 22/209 (10%)
Query: 352 VIGRGGFGKVYR------GVLASNVQIAVKKVSHDSKQGIKE-FVAELVSMGRL-RHRNL 403
+G G FGKV G + +++AVK + + KE ++EL M L +H N+
Sbjct: 45 TLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENI 104
Query: 404 VKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLN--------WYQRFRIIRGVASG 455
V L G C G L++ +Y G L L + L+ VA G
Sbjct: 105 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQG 164
Query: 456 LLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR--LYDHDTIPQTTKLVGTFGY 513
+ +L + +HRD+ NVLL K+GDFGLAR + D + I + + +
Sbjct: 165 MAFLAS---KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL-PVKW 220
Query: 514 MDPELMRTGKASTSTDVYAFGVFMLEVAS 542
M PE + + +DV+++G+ + E+ S
Sbjct: 221 MAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 97/210 (46%), Gaps = 12/210 (5%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGI---KEFVAELVSMGRLRH-RNLVKLRG 408
+GRG F V + + S Q K ++G E + E+ + + ++ L
Sbjct: 37 LGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHE 96
Query: 409 YCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVL 468
E +L+ +Y G + + + ++ R+I+ + G+ YLH++ ++
Sbjct: 97 VYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN---NIV 153
Query: 469 HRDIKPANVLLDADL---NGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKAS 525
H D+KP N+LL + + K+ DFG++R H + +++GT Y+ PE++ +
Sbjct: 154 HLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHAC--ELREIMGTPEYLAPEILNYDPIT 211
Query: 526 TSTDVYAFGVFMLEVASGRRPVEQQGSMET 555
T+TD++ G+ + + P + + ET
Sbjct: 212 TATDMWNIGIIAYMLLTHTSPFVGEDNQET 241
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 29/213 (13%)
Query: 350 KDVIGRGGFGKVYRGVLASNVQIAVKKVS-HDSKQGIKEFVAELVSMGRLRHRNLVKLRG 408
++ IG+G FG+V+RG ++AVK S + + +E AE+ LRH N++
Sbjct: 34 QESIGKGRFGEVWRGKWRGE-EVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIA 90
Query: 409 YCRRKG----EFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDW- 463
+ + LV DY +GSL L+ + + ++ ASGL +LH +
Sbjct: 91 ADNKDNGTWTQLWLVSDYHEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHLHMEIV 147
Query: 464 ----EQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKL-----VGTFGYM 514
+ + HRD+K N+L+ + + D GLA HD+ T + VGT YM
Sbjct: 148 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYM 205
Query: 515 DPEL------MRTGKASTSTDVYAFGVFMLEVA 541
PE+ M+ ++ D+YA G+ E+A
Sbjct: 206 APEVLDDSINMKHFESFKRADIYAMGLVFWEIA 238
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGI--KEFVAELVS 394
K +++ + +++ +G G +G V + ++AVKK+S + I K EL
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 395 MGRLRHRNLVKLRGY---CRRKGEFLLVY--DYMPNGSLDKILHTNIKPCLNWYQRFRII 449
+ ++H N++ L R EF VY ++ L+ I+ + + + +F +I
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF-LI 127
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG 509
+ GL Y+H ++HRD+KP+N+ ++ D K+ DFGLAR D + V
Sbjct: 128 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMAGFVA 180
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
T Y PE+M T D+++ G M E+ +GR
Sbjct: 181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 28/213 (13%)
Query: 346 GFKDKDVIGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVK 405
+ + VIG G FG V++ L + ++A+KKV D + + EL M ++H N+V
Sbjct: 41 AYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNR----ELQIMRIVKHPNVVD 96
Query: 406 LRGYCRRKGE-----FL-LVYDYMPNG------SLDKILHTNIKPCLNWYQRFRIIRGVA 453
L+ + G+ FL LV +Y+P K+ T + Y ++++R +A
Sbjct: 97 LKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYM-YQLLRSLA 155
Query: 454 SGLLYLHEDWEQVVLHRDIKPANVLLDADLNG-KLGDFGLARLYDHDTIPQTTKLVGTFG 512
Y+H + HRDIKP N+LLD KL DFG A++ P + + +
Sbjct: 156 ----YIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGE-PNVSXICSRY- 206
Query: 513 YMDPELM-RTGKASTSTDVYAFGVFMLEVASGR 544
Y PEL+ +T+ D+++ G M E+ G+
Sbjct: 207 YRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 29/213 (13%)
Query: 350 KDVIGRGGFGKVYRGVLASNVQIAVKKVS-HDSKQGIKEFVAELVSMGRLRHRNLVKLRG 408
++ IG+G FG+V+RG ++AVK S + + +E AE+ LRH N++
Sbjct: 9 QESIGKGRFGEVWRGKWRGE-EVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIA 65
Query: 409 YCRRKG----EFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDW- 463
+ + LV DY +GSL L+ + + ++ ASGL +LH +
Sbjct: 66 ADNKDNGTWTQLWLVSDYHEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHLHMEIV 122
Query: 464 ----EQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKL-----VGTFGYM 514
+ + HRD+K N+L+ + + D GLA HD+ T + VGT YM
Sbjct: 123 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYM 180
Query: 515 DPEL------MRTGKASTSTDVYAFGVFMLEVA 541
PE+ M+ ++ D+YA G+ E+A
Sbjct: 181 APEVLDDSINMKHFESFKRADIYAMGLVFWEIA 213
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 101/217 (46%), Gaps = 22/217 (10%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGI--KEFVAELVS 394
K ++ K + +G G +G V + S ++A+KK+S + I K EL+
Sbjct: 35 KTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLL 94
Query: 395 MGRLRHRNLVKL------RGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRI 448
+ ++H N++ L R +F LV +M L KI+ Y +++
Sbjct: 95 LKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFM-QTDLQKIMGMEFSEEKIQYLVYQM 153
Query: 449 IRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLV 508
++G L Y+H V+HRD+KP N+ ++ D K+ DFGLAR D + T V
Sbjct: 154 LKG----LKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLARHAD----AEMTGYV 202
Query: 509 GTFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
T Y PE++ + T D+++ G M E+ +G+
Sbjct: 203 VTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 29/213 (13%)
Query: 350 KDVIGRGGFGKVYRGVLASNVQIAVKKVS-HDSKQGIKEFVAELVSMGRLRHRNLVKLRG 408
++ IG+G FG+V+RG ++AVK S + + +E AE+ LRH N++
Sbjct: 8 QESIGKGRFGEVWRGKWRGE-EVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIA 64
Query: 409 YCRRKG----EFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDW- 463
+ + LV DY +GSL L+ + + ++ ASGL +LH +
Sbjct: 65 ADNKDNGTWTQLWLVSDYHEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHLHMEIV 121
Query: 464 ----EQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKL-----VGTFGYM 514
+ + HRD+K N+L+ + + D GLA HD+ T + VGT YM
Sbjct: 122 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYM 179
Query: 515 DPEL------MRTGKASTSTDVYAFGVFMLEVA 541
PE+ M+ ++ D+YA G+ E+A
Sbjct: 180 APEVLDDSINMKHFESFKRADIYAMGLVFWEIA 212
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 98/222 (44%), Gaps = 35/222 (15%)
Query: 352 VIGRGGFGKVYRGV------LASNVQIAVKKVSHDSKQGIKE-FVAELVSMGRL-RHRNL 403
V+G G FGKV ++Q+AVK + + +E ++EL M +L H N+
Sbjct: 52 VLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENI 111
Query: 404 VKLRGYCRRKGEFLLVYDYMPNGSL-------------DKILHTNIK--------PCLNW 442
V L G C G L+++Y G L D+I + N K L +
Sbjct: 112 VNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTF 171
Query: 443 YQRFRIIRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR--LYDHDT 500
VA G+ +L + +HRD+ NVL+ K+ DFGLAR + D +
Sbjct: 172 EDLLCFAYQVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNY 228
Query: 501 IPQTTKLVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEVAS 542
+ + + +M PE + G + +DV+++G+ + E+ S
Sbjct: 229 VVRGNARLPV-KWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 29/213 (13%)
Query: 350 KDVIGRGGFGKVYRGVLASNVQIAVKKVS-HDSKQGIKEFVAELVSMGRLRHRNLVKLRG 408
++ IG+G FG+V+RG ++AVK S + + +E AE+ LRH N++
Sbjct: 14 QESIGKGRFGEVWRGKWRGE-EVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIA 70
Query: 409 YCRRKG----EFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDW- 463
+ + LV DY +GSL L+ + + ++ ASGL +LH +
Sbjct: 71 ADNKDNGTWTQLWLVSDYHEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHLHMEIV 127
Query: 464 ----EQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKL-----VGTFGYM 514
+ + HRD+K N+L+ + + D GLA HD+ T + VGT YM
Sbjct: 128 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYM 185
Query: 515 DPEL------MRTGKASTSTDVYAFGVFMLEVA 541
PE+ M+ ++ D+YA G+ E+A
Sbjct: 186 APEVLDDSINMKHFESFKRADIYAMGLVFWEIA 218
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 19/216 (8%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGI--KEFVAELVS 394
K +++ + +++ +G G +G V + +++AVKK+S + I K EL
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 395 MGRLRHRNLVKLRGY---CRRKGEFLLVY--DYMPNGSLDKILHTNIKPCLNWYQRFRII 449
+ ++H N++ L R EF VY ++ L+ I+ + + + +F +I
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF-LI 131
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG 509
+ GL Y+H ++HRD+KP+N+ ++ D K+ D GLAR D + T V
Sbjct: 132 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDAGLARHTDD----EMTGYVA 184
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
T Y PE+M T D+++ G M E+ +GR
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1UZY|A Chain A, Erythrina Crystagalli Lectin
pdb|1UZY|B Chain B, Erythrina Crystagalli Lectin
pdb|1UZZ|A Chain A, Erythrina Cristagalli Bound To N-Linked Oligosaccharide
And Lactose
pdb|1UZZ|B Chain B, Erythrina Cristagalli Bound To N-Linked Oligosaccharide
And Lactose
pdb|1UZZ|C Chain C, Erythrina Cristagalli Bound To N-Linked Oligosaccharide
And Lactose
pdb|1UZZ|D Chain D, Erythrina Cristagalli Bound To N-Linked Oligosaccharide
And Lactose
pdb|1V00|A Chain A, Erythrina Cristagalli Lectin
pdb|1V00|B Chain B, Erythrina Cristagalli Lectin
pdb|1V00|C Chain C, Erythrina Cristagalli Lectin
pdb|1V00|D Chain D, Erythrina Cristagalli Lectin
Length = 242
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 106/250 (42%), Gaps = 44/250 (17%)
Query: 36 NEDAQLQRDGLASVHSNGLLQLTNT-----VSPQQEGHAFYRLPIK-FNTXXXXXXXXXX 89
N D LQ G A + +G+LQLT + G Y P+ ++
Sbjct: 15 NNDLTLQ--GAAIITQSGVLQLTKINQNGMPAWDSTGRTLYTKPVHIWDMTTGTVASFET 72
Query: 90 NFVFAI-----------GMAFVISPSKDLGKAEASPSEYLGLFNASNNGQSTNHILAIEL 138
F F+I G+ F + P+K A YLG+FN S S LA+E
Sbjct: 73 RFSFSIEQPYTRPLPADGLVFFMGPTK---SKPAQGYGYLGVFNNSKQDNSY-QTLAVEF 128
Query: 139 DTVQNLDFDDIDDNHVGIDVNSLISHESAPAAYFSDREGMNKTLELIIGDPIQIWISYDG 198
DT N +D H+GIDVNS+ S ++ P +L G + I YD
Sbjct: 129 DTFSN-PWDPPQVPHIGIDVNSIRSIKTQP-------------FQLDNGQVANVVIKYDA 174
Query: 199 AEK-LLNVTLAPMSIPKPTKPLLSRAINLSHILLETMYVGFSASTGSLK---SSHYVLGW 254
+ K LL V + P S T ++ +++ +L E + VG S +TG+ + +H V W
Sbjct: 175 SSKILLAVLVYPSSGAIYT---IAEIVDVKQVLPEWVDVGLSGATGAQRDAAETHDVYSW 231
Query: 255 SFNRSGPALN 264
SF+ S P N
Sbjct: 232 SFHASLPETN 241
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 29/213 (13%)
Query: 350 KDVIGRGGFGKVYRGVLASNVQIAVKKVS-HDSKQGIKEFVAELVSMGRLRHRNLVKLRG 408
++ IG+G FG+V+RG ++AVK S + + +E AE+ LRH N++
Sbjct: 11 QESIGKGRFGEVWRGKWRGE-EVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIA 67
Query: 409 YCRRKG----EFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDW- 463
+ + LV DY +GSL L+ + + ++ ASGL +LH +
Sbjct: 68 ADNKDNGTWTQLWLVSDYHEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHLHMEIV 124
Query: 464 ----EQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKL-----VGTFGYM 514
+ + HRD+K N+L+ + + D GLA HD+ T + VGT YM
Sbjct: 125 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYM 182
Query: 515 DPEL------MRTGKASTSTDVYAFGVFMLEVA 541
PE+ M+ ++ D+YA G+ E+A
Sbjct: 183 APEVLDDSINMKHFESFKRADIYAMGLVFWEIA 215
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 101/217 (46%), Gaps = 22/217 (10%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGI--KEFVAELVS 394
K ++ K + +G G +G V + S ++A+KK+S + I K EL+
Sbjct: 17 KTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLL 76
Query: 395 MGRLRHRNLVKL------RGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRI 448
+ ++H N++ L R +F LV +M L KI+ Y +++
Sbjct: 77 LKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFM-QTDLQKIMGLKFSEEKIQYLVYQM 135
Query: 449 IRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLV 508
++G L Y+H V+HRD+KP N+ ++ D K+ DFGLAR D + T V
Sbjct: 136 LKG----LKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLARHAD----AEMTGYV 184
Query: 509 GTFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
T Y PE++ + T D+++ G M E+ +G+
Sbjct: 185 VTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 29/213 (13%)
Query: 350 KDVIGRGGFGKVYRGVLASNVQIAVKKVS-HDSKQGIKEFVAELVSMGRLRHRNLVKLRG 408
++ IG+G FG+V+RG ++AVK S + + +E AE+ LRH N++
Sbjct: 47 QESIGKGRFGEVWRGKWRGE-EVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIA 103
Query: 409 YCRRKG----EFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDW- 463
+ + LV DY +GSL L+ + + ++ ASGL +LH +
Sbjct: 104 ADNKDNGTWTQLWLVSDYHEHGSLFDYLN---RYTVTVEGMIKLALSTASGLAHLHMEIV 160
Query: 464 ----EQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKL-----VGTFGYM 514
+ + HRD+K N+L+ + + D GLA HD+ T + VGT YM
Sbjct: 161 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYM 218
Query: 515 DPEL------MRTGKASTSTDVYAFGVFMLEVA 541
PE+ M+ ++ D+YA G+ E+A
Sbjct: 219 APEVLDDSINMKHFESFKRADIYAMGLVFWEIA 251
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 111/252 (44%), Gaps = 23/252 (9%)
Query: 319 YEEVYEDWEREYGPQRFTYKDLYKATK--GFKDKDVIGRGGFGKVYRGVL-----ASNVQ 371
YE Y D P+ K++Y K +DK+ +G G FG V +G V
Sbjct: 349 YESPYAD------PEEIRPKEVYLDRKLLTLEDKE-LGSGNFGTVKKGYYQMKKVVKTVA 401
Query: 372 IAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKI 431
+ + K + E +AE M +L + +V++ G C + ++LV + G L+K
Sbjct: 402 VKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKY 460
Query: 432 LHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFG 491
L N + ++ V+ G+ YL E +HRD+ NVLL K+ DFG
Sbjct: 461 LQQNRH--VKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFG 515
Query: 492 LARLYDHDTIPQTTKLVGTF--GYMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVE 548
L++ D + G + + PE + K S+ +DV++FGV M E S G++P
Sbjct: 516 LSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 575
Query: 549 QQGSMETVNLVD 560
E +++
Sbjct: 576 GMKGSEVTAMLE 587
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 22/209 (10%)
Query: 352 VIGRGGFGKVYR------GVLASNVQIAVKKVSHDSKQGIKE-FVAELVSMGRL-RHRNL 403
+G G FGKV G + +++AVK + + KE ++EL M L +H N+
Sbjct: 53 TLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENI 112
Query: 404 VKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLN--------WYQRFRIIRGVASG 455
V L G C G L++ +Y G L L + L+ VA G
Sbjct: 113 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQG 172
Query: 456 LLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR--LYDHDTIPQTTKLVGTFGY 513
+ +L + +HRD+ NVLL K+GDFGLAR + D + I + + +
Sbjct: 173 MAFLAS---KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL-PVKW 228
Query: 514 MDPELMRTGKASTSTDVYAFGVFMLEVAS 542
M PE + + +DV+++G+ + E+ S
Sbjct: 229 MAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 111/252 (44%), Gaps = 23/252 (9%)
Query: 319 YEEVYEDWEREYGPQRFTYKDLYKATK--GFKDKDVIGRGGFGKVYRGVL-----ASNVQ 371
YE Y D P+ K++Y K +DK+ +G G FG V +G V
Sbjct: 6 YESPYAD------PEEIRPKEVYLDRKLLTLEDKE-LGSGNFGTVKKGYYQMKKVVKTVA 58
Query: 372 IAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKI 431
+ + K + E +AE M +L + +V++ G C + ++LV + G L+K
Sbjct: 59 VKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKY 117
Query: 432 LHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFG 491
L N + ++ V+ G+ YL E +HRD+ NVLL K+ DFG
Sbjct: 118 LQQNRH--VKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFG 172
Query: 492 LARLYDHDTIPQTTKLVGTF--GYMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVE 548
L++ D + G + + PE + K S+ +DV++FGV M E S G++P
Sbjct: 173 LSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 232
Query: 549 QQGSMETVNLVD 560
E +++
Sbjct: 233 GMKGSEVTAMLE 244
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 111/252 (44%), Gaps = 23/252 (9%)
Query: 319 YEEVYEDWEREYGPQRFTYKDLYKATK--GFKDKDVIGRGGFGKVYRGVL-----ASNVQ 371
YE Y D P+ K++Y K +DK+ +G G FG V +G V
Sbjct: 6 YESPYAD------PEEIRPKEVYLDRKLLTLEDKE-LGSGNFGTVKKGYYQMKKVVKTVA 58
Query: 372 IAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKI 431
+ + K + E +AE M +L + +V++ G C + ++LV + G L+K
Sbjct: 59 VKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKY 117
Query: 432 LHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFG 491
L N + ++ V+ G+ YL E +HRD+ NVLL K+ DFG
Sbjct: 118 LQQNRH--VKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFG 172
Query: 492 LARLYDHDTIPQTTKLVGTF--GYMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVE 548
L++ D + G + + PE + K S+ +DV++FGV M E S G++P
Sbjct: 173 LSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYR 232
Query: 549 QQGSMETVNLVD 560
E +++
Sbjct: 233 GMKGSEVTAMLE 244
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 94/212 (44%), Gaps = 24/212 (11%)
Query: 352 VIGRGGFGKVYR------GVLASNVQIAVKKVSHDSKQGIKE-FVAELVSMGRL-RHRNL 403
+G G FGKV G + +++AVK + + KE ++EL M L +H N+
Sbjct: 53 TLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENI 112
Query: 404 VKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDW 463
V L G C G L++ +Y G L L + L F I AS LH
Sbjct: 113 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSR-VLETDPAFAIANSTASTRDLLHFS- 170
Query: 464 EQVV-----------LHRDIKPANVLLDADLNGKLGDFGLAR--LYDHDTIPQTTKLVGT 510
QV +HRD+ NVLL K+GDFGLAR + D + I + +
Sbjct: 171 SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL-P 229
Query: 511 FGYMDPELMRTGKASTSTDVYAFGVFMLEVAS 542
+M PE + + +DV+++G+ + E+ S
Sbjct: 230 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 19/216 (8%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGI--KEFVAELVS 394
K +++ + +++ +G G +G V + +++AVKK+S + I K EL
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 395 MGRLRHRNLVKLRGY---CRRKGEFLLVY--DYMPNGSLDKILHTNIKPCLNWYQRFRII 449
+ ++H N++ L R EF VY ++ L+ I+ + + + +F +I
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF-LI 131
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG 509
+ GL Y+H ++HRD+KP+N+ ++ D K+ D GLAR D + T V
Sbjct: 132 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDRGLARHTDD----EMTGYVA 184
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
T Y PE+M T D+++ G M E+ +GR
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 101/227 (44%), Gaps = 21/227 (9%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGVL----ASNVQIAVKKVSHD--SKQGIKEFVAE 391
+D+ + F ++G+G FG V L S V++AVK + D + I+EF+ E
Sbjct: 16 EDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLRE 75
Query: 392 LVSMGRLRHRNLVKLRGYC---RRKGEF---LLVYDYMPNGSLDKIL---HTNIKPC-LN 441
M H ++ KL G R KG +++ +M +G L L P L
Sbjct: 76 AACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLP 135
Query: 442 WYQRFRIIRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDHDT 500
R + +A G+ YL + +HRD+ N +L D+ + DFGL+R +Y D
Sbjct: 136 LQTLVRFMVDIACGMEYLSS---RNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDY 192
Query: 501 IPQTTKLVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRP 546
Q ++ E + + +DV+AFGV M E+ + G+ P
Sbjct: 193 YRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTP 239
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 104/210 (49%), Gaps = 16/210 (7%)
Query: 353 IGRGGFGKVYRGVLASNVQI-AVKKVSHD-SKQGIKEFVAEL-VSMGRLRHRNLVKLRGY 409
+GRG +G V + + QI AVK++ + Q K + +L +SM + V G
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 118
Query: 410 CRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRF--RIIRGVASGLLYLHEDWEQVV 467
R+G+ + + M + SLDK I + +I + L +LH V
Sbjct: 119 LFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS--V 175
Query: 468 LHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYM-----DPELMRTG 522
+HRD+KP+NVL++A K+ DFG++ Y D++ +T G YM +PEL + G
Sbjct: 176 IHRDVKPSNVLINALGQVKMCDFGISG-YLVDSVAKTID-AGCKPYMAPERINPELNQKG 233
Query: 523 KASTSTDVYAFGVFMLEVASGRRPVEQQGS 552
S +D+++ G+ M+E+A R P + G+
Sbjct: 234 -YSVKSDIWSLGITMIELAILRFPYDSWGT 262
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 19/216 (8%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGI--KEFVAELVS 394
K +++ + +++ +G G +G V + +++AVKK+S + I K EL
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 395 MGRLRHRNLVKLRGY---CRRKGEFLLVY--DYMPNGSLDKILHTNIKPCLNWYQRFRII 449
+ ++H N++ L R EF VY ++ L+ I+ + + + +F +I
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF-LI 131
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG 509
+ GL Y+H ++HRD+KP+N+ ++ D K+ D GLAR D + T V
Sbjct: 132 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDGGLARHTDD----EMTGYVA 184
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
T Y PE+M T D+++ G M E+ +GR
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGI--KEFVAELVS 394
K +++ + +++ +G G +G V + ++AVKK+S + I K EL
Sbjct: 35 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 94
Query: 395 MGRLRHRNLVKLRGY---CRRKGEFLLVY--DYMPNGSLDKILHTNIKPCLNWYQRFRII 449
+ ++H N++ L R EF VY ++ L+ I+ + + + +F +I
Sbjct: 95 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF-LI 151
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG 509
+ GL Y+H ++HRD+KP+N+ ++ D K+ DFGLAR D + V
Sbjct: 152 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMXGXVA 204
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
T Y PE+M T D+++ G M E+ +GR
Sbjct: 205 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 101/215 (46%), Gaps = 24/215 (11%)
Query: 344 TKGFKDKDVIGRGGFGKVYR--GVLA----SNVQIAVKKVSHDSKQGIKEFVAELVSMGR 397
T+ ++ + +G+G F V R VLA + + I KK+S Q + E A + +
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKL-EREARICRL-- 66
Query: 398 LRHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRF---RIIRGVAS 454
L+H N+V+L +G L++D + G L + + +Y I+ +
Sbjct: 67 LKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAR-----EYYSEADASHCIQQILE 121
Query: 455 GLLYLHEDWEQVVLHRDIKPANVLLDADLNG---KLGDFGLARLYDHDTIPQTTKLVGTF 511
+L+ H+ V+HR++KP N+LL + L G KL DFGLA + + GT
Sbjct: 122 AVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ-QAWFGFAGTP 177
Query: 512 GYMDPELMRTGKASTSTDVYAFGVFMLEVASGRRP 546
GY+ PE++R D++A GV + + G P
Sbjct: 178 GYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPP 212
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 99/223 (44%), Gaps = 35/223 (15%)
Query: 347 FKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGIKEFVA-ELVSMGRLRHRNLV 404
F+ +GRGGFG V+ + A+K++ +++ +E V E+ ++ +L H +V
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 66
Query: 405 K-LRGYCRRKGEFLL------VYDYMPNGSLDKILHTNIKPCLN----WYQRFR-----I 448
+ + + L VY Y+ + N+K +N +R R I
Sbjct: 67 RYFNAWLEKNTTEKLQPSSPKVYLYI---QMQLCRKENLKDWMNGRCTIEERERSVCLHI 123
Query: 449 IRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQT---- 504
+A + +LH + ++HRD+KP+N+ D K+GDFGL D D QT
Sbjct: 124 FLQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTP 180
Query: 505 -------TKLVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEV 540
T VGT YM PE + S D+++ G+ + E+
Sbjct: 181 MPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFEL 223
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 99/209 (47%), Gaps = 11/209 (5%)
Query: 347 FKDKDVIGRGGFGKVYRGVLASNVQI----AVKKVSHDSKQGIKEFVAELVSMGRLRHRN 402
F+ V+G+GGFG+V + + ++ ++K ++G + E + ++ R
Sbjct: 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRF 245
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHED 462
+V L K LV M G L ++ + + + GL LH +
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE 305
Query: 463 WEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTK-LVGTFGYMDPELMRT 521
+++RD+KP N+LLD + ++ D GLA H QT K VGT GYM PE+++
Sbjct: 306 ---RIVYRDLKPENILLDDHGHIRISDLGLAV---HVPEGQTIKGRVGTVGYMAPEVVKN 359
Query: 522 GKASTSTDVYAFGVFMLEVASGRRPVEQQ 550
+ + S D +A G + E+ +G+ P +Q+
Sbjct: 360 ERYTFSPDWWALGCLLYEMIAGQSPFQQR 388
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 107/239 (44%), Gaps = 17/239 (7%)
Query: 332 PQRFTYKDLYKATK--GFKDKDVIGRGGFGKVYRGVL-----ASNVQIAVKKVSHDSKQG 384
P+ K++Y K +DK+ +G G FG V +G V + + K +
Sbjct: 11 PEEIRPKEVYLDRKLLTLEDKE-LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL 69
Query: 385 IKEFVAELVSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQ 444
E +AE M +L + +V++ G C + ++LV + G L+K L N +
Sbjct: 70 KDELLAEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRH--VKDKN 126
Query: 445 RFRIIRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQT 504
++ V+ G+ YL E +HRD+ NVLL K+ DFGL++ D
Sbjct: 127 IIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 183
Query: 505 TKLVGTF--GYMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVD 560
+ G + + PE + K S+ +DV++FGV M E S G++P E +++
Sbjct: 184 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 242
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 98/211 (46%), Gaps = 13/211 (6%)
Query: 342 KATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHD--SKQGIKEFVAELVSMGRL 398
K + + K+ +G+G F V R V + ++ A K ++ S + ++ E +L
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 62
Query: 399 RHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLY 458
+H N+V+L + + LV+D + G L + + + + I+ + + Y
Sbjct: 63 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVA--REFYSEADASHCIQQILESIAY 120
Query: 459 LHEDWEQVVLHRDIKPANVLLDADLNG---KLGDFGLARLYDHDTIPQTTKLVGTFGYMD 515
H + ++HR++KP N+LL + G KL DFGLA + + GT GY+
Sbjct: 121 CHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLS 175
Query: 516 PELMRTGKASTSTDVYAFGVFMLEVASGRRP 546
PE+++ S D++A GV + + G P
Sbjct: 176 PEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 99/209 (47%), Gaps = 11/209 (5%)
Query: 347 FKDKDVIGRGGFGKVYRGVLASNVQI----AVKKVSHDSKQGIKEFVAELVSMGRLRHRN 402
F+ V+G+GGFG+V + + ++ ++K ++G + E + ++ R
Sbjct: 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRF 245
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHED 462
+V L K LV M G L ++ + + + GL LH +
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE 305
Query: 463 WEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTK-LVGTFGYMDPELMRT 521
+++RD+KP N+LLD + ++ D GLA H QT K VGT GYM PE+++
Sbjct: 306 ---RIVYRDLKPENILLDDHGHIRISDLGLAV---HVPEGQTIKGRVGTVGYMAPEVVKN 359
Query: 522 GKASTSTDVYAFGVFMLEVASGRRPVEQQ 550
+ + S D +A G + E+ +G+ P +Q+
Sbjct: 360 ERYTFSPDWWALGCLLYEMIAGQSPFQQR 388
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 26/214 (12%)
Query: 352 VIGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKE---------FVAELVSMGRLRHRN 402
+IGRGGFG+VY A ++ K + +K+ + LVS G
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 255
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTN---IKPCLNWYQRFRIIRGVASGLLYL 459
+ + K F+L D M G L L + + + +Y I+ GL ++
Sbjct: 256 CMSYAFHTPDKLSFIL--DLMNGGDLHYHLSQHGVFSEADMRFYAAEIIL-----GLEHM 308
Query: 460 HEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELM 519
H + V++RD+KPAN+LLD + ++ D GLA + P + VGT GYM PE++
Sbjct: 309 H---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-PHAS--VGTHGYMAPEVL 362
Query: 520 RTGKA-STSTDVYAFGVFMLEVASGRRPVEQQGS 552
+ G A +S D ++ G + ++ G P Q +
Sbjct: 363 QKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 396
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 26/214 (12%)
Query: 352 VIGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKE---------FVAELVSMGRLRHRN 402
+IGRGGFG+VY A ++ K + +K+ + LVS G
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 255
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTN---IKPCLNWYQRFRIIRGVASGLLYL 459
+ + K F+L D M G L L + + + +Y I+ GL ++
Sbjct: 256 CMSYAFHTPDKLSFIL--DLMNGGDLHYHLSQHGVFSEADMRFYAAEIIL-----GLEHM 308
Query: 460 HEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELM 519
H + V++RD+KPAN+LLD + ++ D GLA + P + VGT GYM PE++
Sbjct: 309 H---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-PHAS--VGTHGYMAPEVL 362
Query: 520 RTGKA-STSTDVYAFGVFMLEVASGRRPVEQQGS 552
+ G A +S D ++ G + ++ G P Q +
Sbjct: 363 QKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 396
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 26/214 (12%)
Query: 352 VIGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKE---------FVAELVSMGRLRHRN 402
+IGRGGFG+VY A ++ K + +K+ + LVS G
Sbjct: 195 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 254
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTN---IKPCLNWYQRFRIIRGVASGLLYL 459
+ + K F+L D M G L L + + + +Y I+ GL ++
Sbjct: 255 CMSYAFHTPDKLSFIL--DLMNGGDLHYHLSQHGVFSEADMRFYAAEIIL-----GLEHM 307
Query: 460 HEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELM 519
H + V++RD+KPAN+LLD + ++ D GLA + P + VGT GYM PE++
Sbjct: 308 H---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-PHAS--VGTHGYMAPEVL 361
Query: 520 RTGKA-STSTDVYAFGVFMLEVASGRRPVEQQGS 552
+ G A +S D ++ G + ++ G P Q +
Sbjct: 362 QKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 395
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 26/214 (12%)
Query: 352 VIGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKE---------FVAELVSMGRLRHRN 402
+IGRGGFG+VY A ++ K + +K+ + LVS G
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 255
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTN---IKPCLNWYQRFRIIRGVASGLLYL 459
+ + K F+L D M G L L + + + +Y I+ GL ++
Sbjct: 256 CMSYAFHTPDKLSFIL--DLMNGGDLHYHLSQHGVFSEADMRFYAAEIIL-----GLEHM 308
Query: 460 HEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELM 519
H + V++RD+KPAN+LLD + ++ D GLA + P + VGT GYM PE++
Sbjct: 309 H---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-PHAS--VGTHGYMAPEVL 362
Query: 520 RTGKA-STSTDVYAFGVFMLEVASGRRPVEQQGS 552
+ G A +S D ++ G + ++ G P Q +
Sbjct: 363 QKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 396
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 98/212 (46%), Gaps = 15/212 (7%)
Query: 342 KATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHD--SKQGIKEFVAELVSMGRL 398
K + + K+ +G+G F V R V + ++ A K ++ S + ++ E +L
Sbjct: 2 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 61
Query: 399 RHRNLVKLRGYCRRKGEFLLVYDYMPNGSL-DKILHTNIKPCLNWYQRFRIIRGVASGLL 457
+H N+V+L + + LV+D + G L + I+ + I+ + +
Sbjct: 62 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF---YSEADASHCIQQILESIA 118
Query: 458 YLHEDWEQVVLHRDIKPANVLLDADLNG---KLGDFGLARLYDHDTIPQTTKLVGTFGYM 514
Y H + ++HR++KP N+LL + G KL DFGLA + + GT GY+
Sbjct: 119 YCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYL 173
Query: 515 DPELMRTGKASTSTDVYAFGVFMLEVASGRRP 546
PE+++ S D++A GV + + G P
Sbjct: 174 SPEVLKKDPYSKPVDIWACGVILYILLVGYPP 205
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 98/212 (46%), Gaps = 15/212 (7%)
Query: 342 KATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHD--SKQGIKEFVAELVSMGRL 398
K + + K+ +G+G F V R V + ++ A K ++ S + ++ E +L
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 62
Query: 399 RHRNLVKLRGYCRRKGEFLLVYDYMPNGSL-DKILHTNIKPCLNWYQRFRIIRGVASGLL 457
+H N+V+L + + LV+D + G L + I+ + I+ + +
Sbjct: 63 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF---YSEADASHCIQQILESIA 119
Query: 458 YLHEDWEQVVLHRDIKPANVLLDADLNG---KLGDFGLARLYDHDTIPQTTKLVGTFGYM 514
Y H + ++HR++KP N+LL + G KL DFGLA + + GT GY+
Sbjct: 120 YCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYL 174
Query: 515 DPELMRTGKASTSTDVYAFGVFMLEVASGRRP 546
PE+++ S D++A GV + + G P
Sbjct: 175 SPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 93/198 (46%), Gaps = 15/198 (7%)
Query: 353 IGRGGFGKV---YRGVLASNVQ--IAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLR 407
+G+G FG V L N +AVK++ H ++F E+ + L +VK R
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 408 G--YCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQ 465
G Y + LV +Y+P+G L L + + L+ + + G+ YL +
Sbjct: 78 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRH-RARLDASRLLLYSSQICKGMEYLGS---R 133
Query: 466 VVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGT---FGYMDPELMRTG 522
+HRD+ N+L++++ + K+ DFGLA+L D + G F Y PE +
Sbjct: 134 RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYA-PESLSDN 192
Query: 523 KASTSTDVYAFGVFMLEV 540
S +DV++FGV + E+
Sbjct: 193 IFSRQSDVWSFGVVLYEL 210
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 103/213 (48%), Gaps = 21/213 (9%)
Query: 341 YKATKGFKDKDVIGRGGFGKV---YRGVLASNVQIAVKKVSH--DSKQGIKEFVAELVSM 395
+ K +++ IG G G V Y +L NV A+KK+S ++ K ELV M
Sbjct: 20 FTVLKRYQNLKPIGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELVLM 77
Query: 396 GRLRHRNLVKLRG-YCRRKG--EFLLVYDYMP--NGSLDKILHTNIKPCLNWYQRFRIIR 450
+ H+N++ L + +K EF VY M + +L +++ + Y ++++
Sbjct: 78 KVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLV 137
Query: 451 GVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGT 510
G+ +LH ++HRD+KP+N+++ +D K+ DFGLAR T T V T
Sbjct: 138 GIK----HLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVT 188
Query: 511 FGYMDPELMRTGKASTSTDVYAFGVFMLEVASG 543
Y PE++ + D+++ GV M E+ G
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 93/198 (46%), Gaps = 15/198 (7%)
Query: 353 IGRGGFGKV---YRGVLASNVQ--IAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLR 407
+G+G FG V L N +AVK++ H ++F E+ + L +VK R
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 408 G--YCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQ 465
G Y + LV +Y+P+G L L + + L+ + + G+ YL +
Sbjct: 91 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRH-RARLDASRLLLYSSQICKGMEYLGS---R 146
Query: 466 VVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG---TFGYMDPELMRTG 522
+HRD+ N+L++++ + K+ DFGLA+L D + G F Y PE +
Sbjct: 147 RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYA-PESLSDN 205
Query: 523 KASTSTDVYAFGVFMLEV 540
S +DV++FGV + E+
Sbjct: 206 IFSRQSDVWSFGVVLYEL 223
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 100/215 (46%), Gaps = 29/215 (13%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCRR 412
IG+G +G+V+ G ++AVK V +++ E+ +RH N++
Sbjct: 45 IGKGRYGEVWMGKWRGE-KVAVK-VFFTTEEASWFRETEIYQTVLMRHENILGFIA-ADI 101
Query: 413 KG-----EFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDW---- 463
KG + L+ DY NGSL L + L+ ++ SGL +LH +
Sbjct: 102 KGTGSWTQLYLITDYHENGSLYDYLKSTT---LDAKSMLKLAYSSVSGLCHLHTEIFSTQ 158
Query: 464 -EQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDT----IPQTTKLVGTFGYMDPEL 518
+ + HRD+K N+L+ + + D GLA + DT IP T+ VGT YM PE+
Sbjct: 159 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTR-VGTKRYMPPEV 217
Query: 519 MRTG------KASTSTDVYAFGVFMLEVASGRRPV 547
+ ++ D+Y+FG+ + EVA RR V
Sbjct: 218 LDESLNRNHFQSYIMADMYSFGLILWEVA--RRCV 250
>pdb|2EIG|A Chain A, Lotus Tetragonolobus Seed Lectin (Isoform)
pdb|2EIG|B Chain B, Lotus Tetragonolobus Seed Lectin (Isoform)
pdb|2EIG|C Chain C, Lotus Tetragonolobus Seed Lectin (Isoform)
pdb|2EIG|D Chain D, Lotus Tetragonolobus Seed Lectin (Isoform)
Length = 234
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 114/247 (46%), Gaps = 40/247 (16%)
Query: 30 FIYHGFNEDAQLQRDGLASVHSNGLLQL-TNTVSPQQEGHAFYRLPIK-FNTXXXXXXXX 87
F Y F +D L G A + ++G L + T+ + + HA Y P+ +++
Sbjct: 3 FNYTRFKDDGSLIFQGDAKIWTDGRLAMPTDPLVNRTTSHALYATPVPIWDSATGNVASF 62
Query: 88 XXNFVFAI----------GMAFVISPSKDLGKAEASPSE---YLGLFNASNNGQSTNHIL 134
+F F + G+ F ++P E P+ YLG+ ++SN S N +
Sbjct: 63 ITSFSFIVSNVQRYPPTDGVVFFLAP----WGTEIPPNSQGGYLGITDSSN---SQNQFV 115
Query: 135 AIELDTVQNL-DFDDIDDNHVGIDVNSLISHESAPAAYFSDREGMNKTLELIIGDPIQIW 193
A+E D+ N+ D + +H+GIDVNS++S ++ + ++ +LE
Sbjct: 116 AVEFDSHPNVWDPKSLRSSHIGIDVNSIMSLKAV------NWNRVSGSLEKAT------- 162
Query: 194 ISYDGAEKLLNVTLAPMSIPKPTKPLLSRAINLSHILLETMYVGFSASTGSL-KSSHYVL 252
I YD K+L V + + T +S+ I+L +L E + VGFSA+T + + H +
Sbjct: 163 IIYDSDTKILTVVMTHQNGQITT---ISQEIDLKTVLPEKVSVGFSATTWNPERERHDIY 219
Query: 253 GWSFNRS 259
WSF +
Sbjct: 220 SWSFTST 226
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGI--KEFVAELVS 394
K +++ + +++ +G G +G V + ++AVKK+S + I K EL
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 395 MGRLRHRNLVKLRGY---CRRKGEFLLVY--DYMPNGSLDKILHTNIKPCLNWYQRFRII 449
+ ++H N++ L R EF VY ++ L+ I+ + + + +F +I
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQF-LI 131
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG 509
+ GL Y+H ++HRD+KP+N+ ++ D K+ DF LAR D + T V
Sbjct: 132 YQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFYLARHTDD----EMTGYVA 184
Query: 510 TFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
T Y PE+M T D+++ G M E+ +GR
Sbjct: 185 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 103/213 (48%), Gaps = 21/213 (9%)
Query: 341 YKATKGFKDKDVIGRGGFGKV---YRGVLASNVQIAVKKVSH--DSKQGIKEFVAELVSM 395
+ K +++ IG G G V Y +L NV A+KK+S ++ K ELV M
Sbjct: 20 FTVLKRYQNLKPIGSGAQGIVVAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELVLM 77
Query: 396 GRLRHRNLVKLRG-YCRRKG--EFLLVYDYMP--NGSLDKILHTNIKPCLNWYQRFRIIR 450
+ H+N++ L + +K EF VY M + +L +++ + Y ++++
Sbjct: 78 KVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLV 137
Query: 451 GVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGT 510
G+ +LH ++HRD+KP+N+++ +D K+ DFGLAR T T V T
Sbjct: 138 GIK----HLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVT 188
Query: 511 FGYMDPELMRTGKASTSTDVYAFGVFMLEVASG 543
Y PE++ + D+++ GV M E+ G
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 93/198 (46%), Gaps = 15/198 (7%)
Query: 353 IGRGGFGKV---YRGVLASNVQ--IAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLR 407
+G+G FG V L N +AVK++ H ++F E+ + L +VK R
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 408 G--YCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQ 465
G Y + LV +Y+P+G L L + + L+ + + G+ YL +
Sbjct: 79 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRH-RARLDASRLLLYSSQICKGMEYLGS---R 134
Query: 466 VVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG---TFGYMDPELMRTG 522
+HRD+ N+L++++ + K+ DFGLA+L D + G F Y PE +
Sbjct: 135 RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYA-PESLSDN 193
Query: 523 KASTSTDVYAFGVFMLEV 540
S +DV++FGV + E+
Sbjct: 194 IFSRQSDVWSFGVVLYEL 211
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 107/239 (44%), Gaps = 17/239 (7%)
Query: 332 PQRFTYKDLYKATK--GFKDKDVIGRGGFGKVYRGVL-----ASNVQIAVKKVSHDSKQG 384
P+ K++Y K +DK+ +G G FG V +G V + + K +
Sbjct: 355 PEEIRPKEVYLDRKLLTLEDKE-LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPAL 413
Query: 385 IKEFVAELVSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQ 444
E +AE M +L + +V++ G C + ++LV + G L+K L N +
Sbjct: 414 KDELLAEANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRH--VKDKN 470
Query: 445 RFRIIRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQT 504
++ V+ G+ YL E +HRD+ NVLL K+ DFGL++ D
Sbjct: 471 IIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 527
Query: 505 TKLVGTF--GYMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVD 560
+ G + + PE + K S+ +DV++FGV M E S G++P E +++
Sbjct: 528 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 586
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 101/218 (46%), Gaps = 19/218 (8%)
Query: 340 LYKATKGFKD----KDVIGRGGFGKVYRGV-LASNVQIAVKKVSHD--SKQGIKEFVAEL 392
+ A+ F D K+ +G+G F V R V + ++ A K ++ S + ++ E
Sbjct: 20 MMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREA 79
Query: 393 VSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSL-DKILHTNIKPCLNWYQRFRIIRG 451
+L+H N+V+L + + LV+D + G L + I+ + + I+
Sbjct: 80 RICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV---AREFYSEADASHCIQQ 136
Query: 452 VASGLLYLHEDWEQVVLHRDIKPANVLLDADLNG---KLGDFGLARLYDHDTIPQTTKLV 508
+ + Y H + ++HR++KP N+LL + G KL DFGLA + +
Sbjct: 137 ILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFA 191
Query: 509 GTFGYMDPELMRTGKASTSTDVYAFGVFMLEVASGRRP 546
GT GY+ PE+++ S D++A GV + + G P
Sbjct: 192 GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 229
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 89/203 (43%), Gaps = 18/203 (8%)
Query: 353 IGRGGFGKVYRGVLASNVQ------IAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKL 406
+G+G F V R V + Q I KK+S Q + E A + + L+H N+V+L
Sbjct: 39 LGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKL-EREARICRL--LKHPNIVRL 95
Query: 407 RGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQV 466
+G LV+D + G L + + +Y + L ++ +
Sbjct: 96 HDSISEEGFHYLVFDLVTGGELFEDIVAR-----EYYSEADASHCIHQILESVNHIHQHD 150
Query: 467 VLHRDIKPANVLLDADLNG---KLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGK 523
++HRD+KP N+LL + G KL DFGLA + GT GY+ PE++R
Sbjct: 151 IVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGEQQAWFGFAGTPGYLSPEVLRKDP 209
Query: 524 ASTSTDVYAFGVFMLEVASGRRP 546
D++A GV + + G P
Sbjct: 210 YGKPVDIWACGVILYILLVGYPP 232
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 93/209 (44%), Gaps = 38/209 (18%)
Query: 353 IGRGGFGKVYRGVLASNVQI-AVKKV--SHDSKQGIKEFVAELVSMGRLRHRNLVKLRGY 409
IG G +G V++ QI A+KK S D K + E+ + +L+H NLV L
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 410 CRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQR---FRIIRGVASGLL----YLHED 462
RRK LV++Y + +LH L+ YQR +++ + L + H+
Sbjct: 71 FRRKRRLHLVFEYCDH----TVLHE-----LDRYQRGVPEHLVKSITWQTLQAVNFCHK- 120
Query: 463 WEQVVLHRDIKPANVLLDADLNGKLGDFGLARL-------YDHDTIPQTTKLVGTFGYMD 515
+HRD+KP N+L+ KL DFG ARL YD + V T Y
Sbjct: 121 --HNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDE--------VATRWYRS 170
Query: 516 PELMR-TGKASTSTDVYAFGVFMLEVASG 543
PEL+ + DV+A G E+ SG
Sbjct: 171 PELLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|1GZ9|A Chain A, High-Resolution Crystal Structure Of Erythrina Cristagalli
Lectin In Complex With 2'-Alpha-L-Fucosyllactose
pdb|1GZC|A Chain A, High-Resolution Crystal Structure Of Erythrina Cristagalli
Lectin In Complex With Lactose
Length = 239
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 107/244 (43%), Gaps = 38/244 (15%)
Query: 36 NEDAQLQRDGLASVHSNGLLQLTNT-----VSPQQEGHAFYRLPIK-FNTXXXXXXXXXX 89
N++ LQ G A + +G+LQLT + G Y P+ +++
Sbjct: 15 NDNLTLQ--GAALITQSGVLQLTKINQNGMPAWDSTGRTLYTKPVHMWDSTTGTVASFET 72
Query: 90 NFVFAIGMAFVISPSKD-----LGKAEASPSE---YLGLFNASNNGQSTNHILAIELDTV 141
F F+I + D +G ++ P++ YLG+FN S S LA+E DT
Sbjct: 73 RFSFSIEQPYTRPLPADGLVFFMGPTKSKPAQGYGYLGVFNNSKQDNSY-QTLAVEFDTF 131
Query: 142 QNLDFDDIDDNHVGIDVNSLISHESAPAAYFSDREGMNKTLELIIGDPIQIWISYDGAEK 201
N +D H+GIDVNS+ S ++ P +L G + I YD K
Sbjct: 132 SN-PWDPPQVPHIGIDVNSIRSIKTQP-------------FQLDNGQVANVVIKYDAPSK 177
Query: 202 LLNVTLA-PMSIPKPTKPLLSRAINLSHILLETMYVGFSASTGSLK---SSHYVLGWSFN 257
+L+V L P S T ++ +++ +L + + VG S +TG+ + +H V WSF
Sbjct: 178 ILHVVLVYPSSGAIYT---IAEIVDVKQVLPDWVDVGLSGATGAQRDAAETHDVYSWSFQ 234
Query: 258 RSGP 261
S P
Sbjct: 235 ASLP 238
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 17/216 (7%)
Query: 353 IGRGGFGKVY----RGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRG 408
+G G +G+V + A +KK S + + E+ + +L H N++KL
Sbjct: 12 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 71
Query: 409 YCRRKGEFLLVYDYMPNGSL-DKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVV 467
+ K + LV + G L D+I+ ++ + I++ V SG YLH+ +
Sbjct: 72 FFEDKRNYYLVMEVYRGGELFDEII---LRQKFSEVDAAVIMKQVLSGTTYLHK---HNI 125
Query: 468 LHRDIKPANVLLDA---DLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKA 524
+HRD+KP N+LL++ D K+ DFGL+ + + + + +GT Y+ PE++R K
Sbjct: 126 VHRDLKPENLLLESKSRDALIKIVDFGLSAHF--EVGGKMKERLGTAYYIAPEVLRK-KY 182
Query: 525 STSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVD 560
DV++ GV + + G P Q E + V+
Sbjct: 183 DEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVE 218
>pdb|1QNW|A Chain A, Lectin Ii From Ulex Europaeus
pdb|1QNW|B Chain B, Lectin Ii From Ulex Europaeus
pdb|1QNW|C Chain C, Lectin Ii From Ulex Europaeus
pdb|1QNW|D Chain D, Lectin Ii From Ulex Europaeus
pdb|1QOO|A Chain A, Lectin Uea-Ii Complexed With Nag
pdb|1QOO|B Chain B, Lectin Uea-Ii Complexed With Nag
pdb|1QOO|C Chain C, Lectin Uea-Ii Complexed With Nag
pdb|1QOO|D Chain D, Lectin Uea-Ii Complexed With Nag
pdb|1QOT|A Chain A, Lectin Uea-Ii Complexed With Fucosyllactose And
Fucosylgalactose
pdb|1QOT|B Chain B, Lectin Uea-Ii Complexed With Fucosyllactose And
Fucosylgalactose
pdb|1QOT|C Chain C, Lectin Uea-Ii Complexed With Fucosyllactose And
Fucosylgalactose
pdb|1QOT|D Chain D, Lectin Uea-Ii Complexed With Fucosyllactose And
Fucosylgalactose
pdb|1QOS|A Chain A, Lectin Uea-Ii Complexed With Chitobiose
pdb|1QOS|B Chain B, Lectin Uea-Ii Complexed With Chitobiose
pdb|1DZQ|A Chain A, Lectin Uea-Ii Complexed With Galactose
pdb|1DZQ|B Chain B, Lectin Uea-Ii Complexed With Galactose
pdb|1DZQ|C Chain C, Lectin Uea-Ii Complexed With Galactose
pdb|1DZQ|D Chain D, Lectin Uea-Ii Complexed With Galactose
Length = 242
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 113/236 (47%), Gaps = 33/236 (13%)
Query: 45 GLASVHSNGLLQLTNTVSPQQE--GHAFYRLPIK-FNTXXXXXXXXXXNFVFAI------ 95
G ASV + G+LQ+T P G A Y PI+ +++ +F F +
Sbjct: 24 GDASVSTTGVLQVTKVSKPTTTSIGRALYAAPIQIWDSITGKVASFATSFSFVVKADKSD 83
Query: 96 ---GMAFVISPSKDLGKAEASPSEYLGLFNASNNGQSTNHILAIELDTVQNLDFD--DID 150
G+AF ++P+ + +S + GLF++S++ +S+N I+A+E DT ++ D D
Sbjct: 84 GVDGLAFFLAPANSQIPSGSSAGMF-GLFSSSDS-KSSNQIIAVEFDTYFGKAYNPWDPD 141
Query: 151 DNHVGIDVNSLISHESAPAAYFSDREGMNKTLELIIGDPIQIWISYDGAEKLLNVTLAPM 210
H+GIDVNS+ S ++ + + G+ + I+Y K L V L+
Sbjct: 142 FKHIGIDVNSIKSIKTVKWDWRN-------------GEVADVVITYRAPTKSLTVCLSYP 188
Query: 211 SIPKPTKPLLSRAINLSHILLETMYVGFSASTGSLK--SSHYVLGWSFNRSGPALN 264
S T +++ +++L IL E + VGFS G+ +H VL W F + A N
Sbjct: 189 S--DGTSNIITASVDLKAILPEWVSVGFSGGVGNAAEFETHDVLSWYFTSNLEANN 242
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 93/225 (41%), Gaps = 21/225 (9%)
Query: 337 YKDLYKATKGFKDK-------DVIGRGGFGKV----YRGVLASNVQIAVKKVSHDSKQGI 385
Y+ + K +G + K VIGRG FG+V ++ + K +
Sbjct: 60 YEKIVKKIRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDS 119
Query: 386 KEFVAELVSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQR 445
F E M +V+L + +V +YMP G L ++ +N W +
Sbjct: 120 AFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLM-SNYDVPEKWAKF 178
Query: 446 FRIIRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTT 505
+ A +L L ++HRD+KP N+LLD + KL DFG D +
Sbjct: 179 Y-----TAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCD 233
Query: 506 KLVGTFGYMDPELMRT----GKASTSTDVYAFGVFMLEVASGRRP 546
VGT Y+ PE++++ G D ++ GVF+ E+ G P
Sbjct: 234 TAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTP 278
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 92/213 (43%), Gaps = 11/213 (5%)
Query: 352 VIGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRL----RHRNLVKLR 407
++G+G FGKV + + K+ K+ VA ++ R+ RH L L+
Sbjct: 155 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALK 214
Query: 408 GYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRG-VASGLLYLHEDWEQV 466
+ V +Y G L H + + + R R + S L YLH E+
Sbjct: 215 YSFQTHDRLCFVMEYANGGEL--FFHLSRERVFS-EDRARFYGAEIVSALDYLHS--EKN 269
Query: 467 VLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKAST 526
V++RD+K N++LD D + K+ DFGL + D T GT Y+ PE++
Sbjct: 270 VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT-FCGTPEYLAPEVLEDNDYGR 328
Query: 527 STDVYAFGVFMLEVASGRRPVEQQGSMETVNLV 559
+ D + GV M E+ GR P Q + L+
Sbjct: 329 AVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI 361
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 92/213 (43%), Gaps = 11/213 (5%)
Query: 352 VIGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRL----RHRNLVKLR 407
++G+G FGKV + + K+ K+ VA ++ R+ RH L L+
Sbjct: 158 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALK 217
Query: 408 GYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRG-VASGLLYLHEDWEQV 466
+ V +Y G L H + + + R R + S L YLH E+
Sbjct: 218 YSFQTHDRLCFVMEYANGGEL--FFHLSRERVFS-EDRARFYGAEIVSALDYLHS--EKN 272
Query: 467 VLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKAST 526
V++RD+K N++LD D + K+ DFGL + D T GT Y+ PE++
Sbjct: 273 VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT-FCGTPEYLAPEVLEDNDYGR 331
Query: 527 STDVYAFGVFMLEVASGRRPVEQQGSMETVNLV 559
+ D + GV M E+ GR P Q + L+
Sbjct: 332 AVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI 364
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 17/216 (7%)
Query: 353 IGRGGFGKVY----RGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRG 408
+G G +G+V + A +KK S + + E+ + +L H N++KL
Sbjct: 29 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 88
Query: 409 YCRRKGEFLLVYDYMPNGSL-DKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVV 467
+ K + LV + G L D+I+ ++ + I++ V SG YLH+ +
Sbjct: 89 FFEDKRNYYLVMEVYRGGELFDEII---LRQKFSEVDAAVIMKQVLSGTTYLHK---HNI 142
Query: 468 LHRDIKPANVLLDA---DLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKA 524
+HRD+KP N+LL++ D K+ DFGL+ + + + + +GT Y+ PE++R K
Sbjct: 143 VHRDLKPENLLLESKSRDALIKIVDFGLSAHF--EVGGKMKERLGTAYYIAPEVLRK-KY 199
Query: 525 STSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLVD 560
DV++ GV + + G P Q E + V+
Sbjct: 200 DEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVE 235
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 90/221 (40%), Gaps = 28/221 (12%)
Query: 352 VIGRGGFGKVY------------RGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLR 399
++G+G FGKV +L V IA +V+H V E + R
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT--------VTESRVLQNTR 63
Query: 400 HRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRG-VASGLLY 458
H L L+ + V +Y G L H + + +R R + S L Y
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFT-EERARFYGAEIVSALEY 120
Query: 459 LHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPEL 518
LH + V++RDIK N++LD D + K+ DFGL + D T GT Y+ PE+
Sbjct: 121 LHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEYLAPEV 176
Query: 519 MRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLV 559
+ + D + GV M E+ GR P Q L+
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI 217
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 14/217 (6%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGVLASNVQI-AVKKVSHDS--KQGIKEFVAELVS 394
+DL + ++ VIGRG FG+V S ++ A+K +S K+ F E
Sbjct: 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 121
Query: 395 MGRLRHRNLVKLRGYCRRKGEFL-LVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVA 453
+ + V Y + +L +V +YMP G L ++ +N W + + A
Sbjct: 122 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM-SNYDVPEKWARFY-----TA 175
Query: 454 SGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGY 513
+L L +HRD+KP N+LLD + KL DFG + + + + VGT Y
Sbjct: 176 EVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDY 235
Query: 514 MDPELMRT----GKASTSTDVYAFGVFMLEVASGRRP 546
+ PE++++ G D ++ GVF+ E+ G P
Sbjct: 236 ISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 272
>pdb|1GSL|A Chain A, Lectin (Fourth Isolated From (Griffonia Simplicifolia))
Complex With Y Human Blood Group Determinant
pdb|1LEC|A Chain A, Structures Of The Lectin Iv Of Griffonia Simplicifolia And
Its Complex With The Lewis B Human Blood Group
Determinant At 2.0 Angstroms Resolution
pdb|1LED|A Chain A, Structures Of The Lectin Iv Of Griffonia Simplicifolia And
Its Complex With The Lewis B Human Blood Group
Determinant At 2.0 Angstroms Resolution
Length = 243
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 95/223 (42%), Gaps = 40/223 (17%)
Query: 53 GLLQLTNTVSP-----QQEGHAFYRLPIKFNTXXXXXXXXXXNFVF---------AIGMA 98
G LQLT T + G A Y P+ +F F A G+A
Sbjct: 33 GALQLTKTDANGNPVRSSAGQASYSEPVFLWDSTGKAASFYTSFTFLLKNYGAPTADGLA 92
Query: 99 FVISPS----KDLGKAEASPSEYLGLFNASNNGQ-STNHILAIELDTVQNLDFDDIDDNH 153
F ++P KD G +LGLF S N ++A+E DT N D++D H
Sbjct: 93 FFLAPVDSSVKDYGG-------FLGLFRHETAADPSKNQVVAVEFDTWINKDWNDPPYPH 145
Query: 154 VGIDVNSLISHESAPAAYFSDREGMNKTLELIIGDPIQIWISYDGAEKLLNVTLAPMSIP 213
+GIDVNS++ S + + + ++ I+YD K+L V L S
Sbjct: 146 IGIDVNSIV---SVATTRWENDDAYGSSIATAH-------ITYDARSKILTVLL---SYE 192
Query: 214 KPTKPLLSRAINLSHILLETMYVGFSASTGSLKSSHYVLGWSF 256
+LS ++L+ +L + + +GFSA G + + Y+L W F
Sbjct: 193 HGRDYILSHVVDLAKVLPQKVRIGFSAGVGYDEVT-YILSWHF 234
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 90/213 (42%), Gaps = 12/213 (5%)
Query: 352 VIGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRL----RHRNLVKLR 407
++G+G FGKV + + K+ K+ VA V+ R+ RH L L+
Sbjct: 15 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK 74
Query: 408 GYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRG-VASGLLYLHEDWEQV 466
+ V +Y G L H + + +R R + S L YLH +
Sbjct: 75 YAFQTHDRLCFVMEYANGGEL--FFHLSRERVFT-EERARFYGAEIVSALEYLHS---RD 128
Query: 467 VLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKAST 526
V++RDIK N++LD D + K+ DFGL + D T GT Y+ PE++
Sbjct: 129 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEYLAPEVLEDNDYGR 187
Query: 527 STDVYAFGVFMLEVASGRRPVEQQGSMETVNLV 559
+ D + GV M E+ GR P Q L+
Sbjct: 188 AVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI 220
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 90/213 (42%), Gaps = 12/213 (5%)
Query: 352 VIGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRL----RHRNLVKLR 407
++G+G FGKV + + K+ K+ VA V+ R+ RH L L+
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK 71
Query: 408 GYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRG-VASGLLYLHEDWEQV 466
+ V +Y G L H + + +R R + S L YLH +
Sbjct: 72 YAFQTHDRLCFVMEYANGGEL--FFHLSRERVFT-EERARFYGAEIVSALEYLHS---RD 125
Query: 467 VLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKAST 526
V++RDIK N++LD D + K+ DFGL + D T GT Y+ PE++
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEYLAPEVLEDNDYGR 184
Query: 527 STDVYAFGVFMLEVASGRRPVEQQGSMETVNLV 559
+ D + GV M E+ GR P Q L+
Sbjct: 185 AVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI 217
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 101/224 (45%), Gaps = 19/224 (8%)
Query: 347 FKDKDVIGRGGFGKVYRGVL-----ASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHR 401
+DK+ +G G FG V +G V + + K + E +AE M +L +
Sbjct: 14 LEDKE-LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNP 72
Query: 402 NLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTN--IKPCLNWYQRFRIIRGVASGLLYL 459
+V++ G C + ++LV + G L+K L N +K ++ V+ G+ YL
Sbjct: 73 YIVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKD----KNIIELVHQVSMGMKYL 127
Query: 460 HEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTF--GYMDPE 517
E +HRD+ NVLL K+ DFGL++ D + G + + PE
Sbjct: 128 EES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPE 184
Query: 518 LMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVD 560
+ K S+ +DV++FGV M E S G++P E +++
Sbjct: 185 CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 228
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 14/217 (6%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGVLASNVQI-AVKKVSHDS--KQGIKEFVAELVS 394
+DL + ++ VIGRG FG+V S ++ A+K +S K+ F E
Sbjct: 67 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 126
Query: 395 MGRLRHRNLVKLRGYCRRKGEFL-LVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVA 453
+ + V Y + +L +V +YMP G L ++ +N W + + A
Sbjct: 127 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM-SNYDVPEKWARFY-----TA 180
Query: 454 SGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGY 513
+L L +HRD+KP N+LLD + KL DFG + + + + VGT Y
Sbjct: 181 EVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDY 240
Query: 514 MDPELMRT----GKASTSTDVYAFGVFMLEVASGRRP 546
+ PE++++ G D ++ GVF+ E+ G P
Sbjct: 241 ISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 14/217 (6%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGVLASNVQI-AVKKVSHDS--KQGIKEFVAELVS 394
+DL + ++ VIGRG FG+V S ++ A+K +S K+ F E
Sbjct: 67 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 126
Query: 395 MGRLRHRNLVKLRGYCRRKGEFL-LVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVA 453
+ + V Y + +L +V +YMP G L ++ +N W + + A
Sbjct: 127 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM-SNYDVPEKWARFY-----TA 180
Query: 454 SGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGY 513
+L L +HRD+KP N+LLD + KL DFG + + + + VGT Y
Sbjct: 181 EVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDY 240
Query: 514 MDPELMRT----GKASTSTDVYAFGVFMLEVASGRRP 546
+ PE++++ G D ++ GVF+ E+ G P
Sbjct: 241 ISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 94/216 (43%), Gaps = 37/216 (17%)
Query: 353 IGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGR-LRHRNLVKLR---- 407
+GRG +G VY+ + GI +++ R L+H N++ L+
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFL 88
Query: 408 GYCRRKGEFLLVYDYMPNG-----SLDKILHTNIKPCLNWYQRFRIIRGVASGLLY---- 458
+ RK L++DY + + N KP ++ RG+ LLY
Sbjct: 89 SHADRK--VWLLFDYAEHDLWHIIKFHRASKANKKPV-------QLPRGMVKSLLYQILD 139
Query: 459 ----LHEDWEQVVLHRDIKPANVLL--DADLNG--KLGDFGLARLYDHDTIP--QTTKLV 508
LH +W VLHRD+KPAN+L+ + G K+ D G ARL++ P +V
Sbjct: 140 GIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVV 196
Query: 509 GTFGYMDPELMRTGKAST-STDVYAFGVFMLEVASG 543
TF Y PEL+ + T + D++A G E+ +
Sbjct: 197 VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS 232
>pdb|3N35|A Chain A, Erythrina Corallodendron Lectin Mutant (Y106g) With N-
Acetylgalactosamine
pdb|3N36|A Chain A, Erythrina Corallodendron Lectin Mutant (Y106g) In Complex
With Galactose
pdb|3N3H|A Chain A, Erythrina Corallodendron Lectin Mutant (Y106g) In Complex
With Citrate
Length = 242
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 105/250 (42%), Gaps = 44/250 (17%)
Query: 36 NEDAQLQRDGLASVHSNGLLQLTNT-----VSPQQEGHAFYRLPIK-FNTXXXXXXXXXX 89
N++ LQ G + + +G+LQLT + G Y P+ ++
Sbjct: 15 NDNLTLQ--GASLITQSGVLQLTKINQNGMPAWDSTGRTLYAKPVHIWDMTTGTVASFET 72
Query: 90 NFVFAI-----------GMAFVISPSKDLGKAEASPSEYLGLFNASNNGQSTNHILAIEL 138
F F+I G+ F + P+K A YLG+FN S S L +E
Sbjct: 73 RFSFSIEQPYTRPLPADGLVFFMGPTK---SKPAQGGGYLGIFNNSKQDNSY-QTLGVEF 128
Query: 139 DTVQNLDFDDIDDNHVGIDVNSLISHESAPAAYFSDREGMNKTLELIIGDPIQIWISYDG 198
DT N +D H+GIDVNS+ S ++ P +L G + I YD
Sbjct: 129 DTFSN-QWDPPQVPHIGIDVNSIRSIKTQP-------------FQLDNGQVANVVIKYDA 174
Query: 199 AEKLLNVTLA-PMSIPKPTKPLLSRAINLSHILLETMYVGFSASTGSLK---SSHYVLGW 254
+ K+L+ L P S T ++ +++ +L E + VG S +TG+ + +H V W
Sbjct: 175 SSKILHAVLVYPSSGAIYT---IAEIVDVKQVLPEWVDVGLSGATGAQRDAAETHDVYSW 231
Query: 255 SFNRSGPALN 264
SF S P N
Sbjct: 232 SFQASLPETN 241
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 102/234 (43%), Gaps = 43/234 (18%)
Query: 342 KATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGI--KEFVAELVSMGRL 398
K ++ K +IGRG +G VY +N +A+KKV+ + I K + E+ + RL
Sbjct: 25 KVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRL 84
Query: 399 RHRNLVKLRGYCRRKGEFLLVYDYM------PNGSLDKILHTNIKPCLNWYQRFR-IIRG 451
+ +++L E LL +D + + L K+ T P Q + I+
Sbjct: 85 KSDYIIRLHDLII--PEDLLKFDELYIVLEIADSDLKKLFKT---PIFLTEQHVKTILYN 139
Query: 452 VASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDT----------- 500
+ G ++HE ++HRD+KPAN LL+ D + K+ DFGLAR + D
Sbjct: 140 LLLGEKFIHESG---IIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEK 196
Query: 501 -------------IPQTTKLVGTFGYMDPELMRTGKAST-STDVYAFGVFMLEV 540
Q T V T Y PEL+ + T S D+++ G E+
Sbjct: 197 EENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAEL 250
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 101/211 (47%), Gaps = 17/211 (8%)
Query: 341 YKATKGFKDKDVIGRGGFGKV---YRGVLASNVQIAVKKVSH--DSKQGIKEFVAELVSM 395
+ K +++ IG G G V Y +L NV A+KK+S ++ K ELV M
Sbjct: 20 FTVLKRYQNLKPIGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELVLM 77
Query: 396 GRLRHRNLVKLRG-YCRRKG--EFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGV 452
+ H+N++ L + +K EF VY M +D L I+ L+ + ++ +
Sbjct: 78 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVM--ELMDANLSQVIQMELDHERMSYLLYQM 135
Query: 453 ASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFG 512
G+ +LH ++HRD+KP+N+++ +D K+ DFGLAR T T V T
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRY 190
Query: 513 YMDPELMRTGKASTSTDVYAFGVFMLEVASG 543
Y PE++ + D+++ G M E+ G
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 101/211 (47%), Gaps = 17/211 (8%)
Query: 341 YKATKGFKDKDVIGRGGFGKV---YRGVLASNVQIAVKKVSH--DSKQGIKEFVAELVSM 395
+ K +++ IG G G V Y +L NV A+KK+S ++ K ELV M
Sbjct: 20 FTVLKRYQNLKPIGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELVLM 77
Query: 396 GRLRHRNLVKLRG-YCRRKG--EFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGV 452
+ H+N++ L + +K EF VY M +D L I+ L+ + ++ +
Sbjct: 78 KVVNHKNIIGLLNVFTPQKSLEEFQDVYIVM--ELMDANLSQVIQMELDHERMSYLLYQM 135
Query: 453 ASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFG 512
G+ +LH ++HRD+KP+N+++ +D K+ DFGLAR T T V T
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRY 190
Query: 513 YMDPELMRTGKASTSTDVYAFGVFMLEVASG 543
Y PE++ + D+++ G M E+ G
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 101/224 (45%), Gaps = 19/224 (8%)
Query: 347 FKDKDVIGRGGFGKVYRGVL-----ASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHR 401
+DK+ +G G FG V +G V + + K + E +AE M +L +
Sbjct: 8 LEDKE-LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNP 66
Query: 402 NLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTN--IKPCLNWYQRFRIIRGVASGLLYL 459
+V++ G C + ++LV + G L+K L N +K ++ V+ G+ YL
Sbjct: 67 YIVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKD----KNIIELVHQVSMGMKYL 121
Query: 460 HEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTF--GYMDPE 517
E +HRD+ NVLL K+ DFGL++ D + G + + PE
Sbjct: 122 EES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 178
Query: 518 LMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVD 560
+ K S+ +DV++FGV M E S G++P E +++
Sbjct: 179 CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 222
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 101/224 (45%), Gaps = 19/224 (8%)
Query: 347 FKDKDVIGRGGFGKVYRGVL-----ASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHR 401
+DK+ +G G FG V +G V + + K + E +AE M +L +
Sbjct: 14 LEDKE-LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNP 72
Query: 402 NLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTN--IKPCLNWYQRFRIIRGVASGLLYL 459
+V++ G C + ++LV + G L+K L N +K ++ V+ G+ YL
Sbjct: 73 YIVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKD----KNIIELVHQVSMGMKYL 127
Query: 460 HEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTF--GYMDPE 517
E +HRD+ NVLL K+ DFGL++ D + G + + PE
Sbjct: 128 EES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 184
Query: 518 LMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVD 560
+ K S+ +DV++FGV M E S G++P E +++
Sbjct: 185 CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 228
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 101/224 (45%), Gaps = 19/224 (8%)
Query: 347 FKDKDVIGRGGFGKVYRGVL-----ASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHR 401
+DK+ +G G FG V +G V + + K + E +AE M +L +
Sbjct: 20 LEDKE-LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNP 78
Query: 402 NLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTN--IKPCLNWYQRFRIIRGVASGLLYL 459
+V++ G C + ++LV + G L+K L N +K ++ V+ G+ YL
Sbjct: 79 YIVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKD----KNIIELVHQVSMGMKYL 133
Query: 460 HEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTF--GYMDPE 517
E +HRD+ NVLL K+ DFGL++ D + G + + PE
Sbjct: 134 EES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 190
Query: 518 LMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVD 560
+ K S+ +DV++FGV M E S G++P E +++
Sbjct: 191 CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 234
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 101/224 (45%), Gaps = 19/224 (8%)
Query: 347 FKDKDVIGRGGFGKVYRGVL-----ASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHR 401
+DK+ +G G FG V +G V + + K + E +AE M +L +
Sbjct: 10 LEDKE-LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNP 68
Query: 402 NLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTN--IKPCLNWYQRFRIIRGVASGLLYL 459
+V++ G C + ++LV + G L+K L N +K ++ V+ G+ YL
Sbjct: 69 YIVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKD----KNIIELVHQVSMGMKYL 123
Query: 460 HEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTF--GYMDPE 517
E +HRD+ NVLL K+ DFGL++ D + G + + PE
Sbjct: 124 EES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 180
Query: 518 LMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVD 560
+ K S+ +DV++FGV M E S G++P E +++
Sbjct: 181 CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 224
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 99/219 (45%), Gaps = 34/219 (15%)
Query: 351 DVIGRGGFGKVYRGVLASNVQIAVKKVSHDSK--QGIKEFVAELVSMGRLRHRNLVKL-- 406
D++G+G V+RG + KV ++ + + + E + +L H+N+VKL
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFA 74
Query: 407 ---RGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPC----LNWYQRFRIIRGVASGLLYL 459
R K +L+ ++ P GSL +L +P L + ++R V G+ +L
Sbjct: 75 IEEETTTRHK---VLIMEFCPCGSLYTVLE---EPSNAYGLPESEFLIVLRDVVGGMNHL 128
Query: 460 HEDWEQVVLHRDIKPANVLLDADLNG----KLGDFGLARLYDHDTIPQTTKLVGTFGYMD 515
E+ ++HR+IKP N++ +G KL DFG AR + D Q L GT Y+
Sbjct: 129 RENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE--QFVSLYGTEEYLH 183
Query: 516 PELMRTG--------KASTSTDVYAFGVFMLEVASGRRP 546
P++ K + D+++ GV A+G P
Sbjct: 184 PDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 105/214 (49%), Gaps = 23/214 (10%)
Query: 341 YKATKGFKDKDVIGRGGFGKV---YRGVLASNVQIAVKKVSH--DSKQGIKEFVAELVSM 395
+ K ++ IG G G V + VL NV AVKK+S ++ K ELV +
Sbjct: 20 FTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINV--AVKKLSRPFQNQTHAKRAYRELVLL 77
Query: 396 GRLRHRNLVKLRG-YCRRKG--EFLLVYDYMP--NGSLDKILHTNIKPCLNWYQRFR-II 449
+ H+N++ L + +K EF VY M + +L +++H + ++R ++
Sbjct: 78 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELD-----HERMSYLL 132
Query: 450 RGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVG 509
+ G+ +LH ++HRD+KP+N+++ +D K+ DFGLAR + + T V
Sbjct: 133 YQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFM--MTPYVV 187
Query: 510 TFGYMDPELMRTGKASTSTDVYAFGVFMLEVASG 543
T Y PE++ + + D+++ G M E+ G
Sbjct: 188 TRYYRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|1FAY|A Chain A, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|B Chain B, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|C Chain C, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|D Chain D, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|E Chain E, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|F Chain F, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|G Chain G, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|H Chain H, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1F9K|A Chain A, Winged Bean Acidic Lectin Complexed With
Methyl-alpha-d-galactose
pdb|1F9K|B Chain B, Winged Bean Acidic Lectin Complexed With
Methyl-alpha-d-galactose
Length = 238
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 113/262 (43%), Gaps = 57/262 (21%)
Query: 26 DVNQFIYHGFNEDAQ---LQRDGLASVHSNGLLQLTNTVSP-----QQEGHAFYRLPIK- 76
+ F + F E+++ LQR AS+ SNG+L+LT + G A Y PIK
Sbjct: 1 ETQSFNFDHFEENSKELNLQRQ--ASIKSNGVLELTKLTKNGVPVWKSTGRALYAEPIKI 58
Query: 77 FNTXXXXXXXXXXNFVFAIGMA------------FVISPSKDLGKAEASPSEYLGLFNAS 124
+++ F F I F++ P+ G+ + LG+F
Sbjct: 59 WDSTTGNVASFETRFSFNITQPYAYPEPADGLTFFMVPPNSPQGEDGGN----LGVFKPP 114
Query: 125 NNGQSTNHILAIELDTVQNLDFDDIDDNHVGIDVNSLISHESAPAAYFSDREGMNKTL-- 182
++ A+E DT QN D H+GIDVNS++S +KTL
Sbjct: 115 EG----DNAFAVEFDTFQNTW--DPQVPHIGIDVNSIVS---------------SKTLHF 153
Query: 183 ELIIGDPIQIWISYDGAEKLLNVTLAPMSIPKPTKPLLSRAINLSHILLETMY--VGFSA 240
+L G + I YD K+LNV LA S+ T LS ++L + + VG SA
Sbjct: 154 QLENGGVANVVIKYDSPTKILNVVLAFHSV--GTVYTLSNIVDLKQEFPNSEWVNVGLSA 211
Query: 241 STGSLKS---SHYVLGWSFNRS 259
+TG K+ +H ++ WSF S
Sbjct: 212 TTGYQKNAVETHEIISWSFTSS 233
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 97/222 (43%), Gaps = 35/222 (15%)
Query: 352 VIGRGGFGKVYR------GVLASNVQIAVKKVSHDSKQGIKE-FVAELVSMGRL-RHRNL 403
+G G FGKV G + +++AVK + + KE ++EL M L +H N+
Sbjct: 38 TLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENI 97
Query: 404 VKLRGYCRRKGEFLLVYDYMPNGSL--------DKILHTNIKPC-------------LNW 442
V L G C G L++ +Y G L + +L ++ P L
Sbjct: 98 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLEL 157
Query: 443 YQRFRIIRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR--LYDHDT 500
VA G+ +L + +HRD+ NVLL K+GDFGLAR + D +
Sbjct: 158 RDLLHFSSQVAQGMAFLAS---KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNY 214
Query: 501 IPQTTKLVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEVAS 542
I + + +M PE + + +DV+++G+ + E+ S
Sbjct: 215 IVKGNARL-PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 103/213 (48%), Gaps = 21/213 (9%)
Query: 341 YKATKGFKDKDVIGRGGFGKV---YRGVLASNVQIAVKKVSH--DSKQGIKEFVAELVSM 395
+ K ++ IG G G V + VL NV AVKK+S ++ K ELV +
Sbjct: 18 FTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINV--AVKKLSRPFQNQTHAKRAYRELVLL 75
Query: 396 GRLRHRNLVKLRG-YCRRKG--EFLLVYDYMP--NGSLDKILHTNIKPCLNWYQRFRIIR 450
+ H+N++ L + +K EF VY M + +L +++H + Y ++++
Sbjct: 76 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLC 135
Query: 451 GVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGT 510
G+ +LH ++HRD+KP+N+++ +D K+ DFGLAR + + T V T
Sbjct: 136 GIK----HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFM--MTPYVVT 186
Query: 511 FGYMDPELMRTGKASTSTDVYAFGVFMLEVASG 543
Y PE++ + D+++ G M E+ G
Sbjct: 187 RYYRAPEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 101/211 (47%), Gaps = 17/211 (8%)
Query: 341 YKATKGFKDKDVIGRGGFGKV---YRGVLASNVQIAVKKVSH--DSKQGIKEFVAELVSM 395
+ K +++ IG G G V Y +L NV A+KK+S ++ K ELV M
Sbjct: 20 FTVLKRYQNLKPIGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELVLM 77
Query: 396 GRLRHRNLVKLRG-YCRRKG--EFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGV 452
+ H+N++ L + +K EF VY M +D L I+ L+ + ++ +
Sbjct: 78 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVM--ELMDANLCQVIQMELDHERMSYLLYQM 135
Query: 453 ASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFG 512
G+ +LH ++HRD+KP+N+++ +D K+ DFGLAR T T V T
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRY 190
Query: 513 YMDPELMRTGKASTSTDVYAFGVFMLEVASG 543
Y PE++ + D+++ G M E+ G
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 101/211 (47%), Gaps = 17/211 (8%)
Query: 341 YKATKGFKDKDVIGRGGFGKV---YRGVLASNVQIAVKKVSH--DSKQGIKEFVAELVSM 395
+ K +++ IG G G V Y +L NV A+KK+S ++ K ELV M
Sbjct: 20 FTVLKRYQNLKPIGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELVLM 77
Query: 396 GRLRHRNLVKLRG-YCRRKG--EFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGV 452
+ H+N++ L + +K EF VY M +D L I+ L+ + ++ +
Sbjct: 78 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVM--ELMDANLSQVIQMELDHERMSYLLYQM 135
Query: 453 ASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFG 512
G+ +LH ++HRD+KP+N+++ +D K+ DFGLAR T T V T
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRY 190
Query: 513 YMDPELMRTGKASTSTDVYAFGVFMLEVASG 543
Y PE++ + D+++ G M E+ G
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 101/211 (47%), Gaps = 17/211 (8%)
Query: 341 YKATKGFKDKDVIGRGGFGKV---YRGVLASNVQIAVKKVSH--DSKQGIKEFVAELVSM 395
+ K +++ IG G G V Y +L NV A+KK+S ++ K ELV M
Sbjct: 20 FTVLKRYQNLKPIGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELVLM 77
Query: 396 GRLRHRNLVKLRG-YCRRKG--EFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGV 452
+ H+N++ L + +K EF VY M +D L I+ L+ + ++ +
Sbjct: 78 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVM--ELMDANLCQVIQMELDHERMSYLLYQM 135
Query: 453 ASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFG 512
G+ +LH ++HRD+KP+N+++ +D K+ DFGLAR T T V T
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRY 190
Query: 513 YMDPELMRTGKASTSTDVYAFGVFMLEVASG 543
Y PE++ + D+++ G M E+ G
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 92/215 (42%), Gaps = 16/215 (7%)
Query: 352 VIGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRL----RHRNLVKLR 407
++G+G FGKV + + K+ K+ VA V+ R+ RH L L+
Sbjct: 17 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK 76
Query: 408 GYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRG-VASGLLYLHEDWEQV 466
+ V +Y G L H + + +R R + S L YLH +
Sbjct: 77 YAFQTHDRLCFVMEYANGGEL--FFHLSRERVFT-EERARFYGAEIVSALEYLHS---RD 130
Query: 467 VLHRDIKPANVLLDADLNGKLGDFGLAR--LYDHDTIPQTTKLVGTFGYMDPELMRTGKA 524
V++RDIK N++LD D + K+ DFGL + + D T+ GT Y+ PE++
Sbjct: 131 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM---KXFCGTPEYLAPEVLEDNDY 187
Query: 525 STSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLV 559
+ D + GV M E+ GR P Q L+
Sbjct: 188 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI 222
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 92/223 (41%), Gaps = 32/223 (14%)
Query: 352 VIGRGGFGKVY------------RGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLR 399
++G+G FGKV +L V IA +V+H V E + R
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHT--------VTESRVLQNTR 63
Query: 400 HRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRG-VASGLLY 458
H L L+ + V +Y G L H + + +R R + S L Y
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFT-EERARFYGAEIVSALEY 120
Query: 459 LHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR--LYDHDTIPQTTKLVGTFGYMDP 516
LH + V++RDIK N++LD D + K+ DFGL + + D T+ GT Y+ P
Sbjct: 121 LHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM---KXFCGTPEYLAP 174
Query: 517 ELMRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLV 559
E++ + D + GV M E+ GR P Q L+
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI 217
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 100/207 (48%), Gaps = 15/207 (7%)
Query: 347 FKDKDVIGRGGFGKVYR-GVLASNVQIAVKKVSHDSKQ-GIKEFVAELVSMGRLRHRNLV 404
FK K +G G FG V+ +S ++ +K ++ D Q +++ AE+ + L H N++
Sbjct: 26 FKRK--LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNII 83
Query: 405 KLRGYCRRKGEFLLVYDYMPNGSL-DKILHTNIK-PCLNWYQRFRIIRGVASGLLYLHED 462
K+ +V + G L ++I+ + L+ +++ + + L Y H
Sbjct: 84 KIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS- 142
Query: 463 WEQVVLHRDIKPANVLL-DADLNG--KLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELM 519
Q V+H+D+KP N+L D + K+ DFGLA L+ D +T GT YM PE+
Sbjct: 143 --QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE--HSTNAAGTALYMAPEVF 198
Query: 520 RTGKASTSTDVYAFGVFMLEVASGRRP 546
+ + D+++ GV M + +G P
Sbjct: 199 KRD-VTFKCDIWSAGVVMYFLLTGCLP 224
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 101/211 (47%), Gaps = 17/211 (8%)
Query: 341 YKATKGFKDKDVIGRGGFGKV---YRGVLASNVQIAVKKVSH--DSKQGIKEFVAELVSM 395
+ K +++ IG G G V Y +L NV A+KK+S ++ K ELV M
Sbjct: 21 FTVLKRYQNLKPIGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELVLM 78
Query: 396 GRLRHRNLVKLRG-YCRRKG--EFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGV 452
+ H+N++ L + +K EF VY M +D L I+ L+ + ++ +
Sbjct: 79 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVM--ELMDANLCQVIQMELDHERMSYLLYQM 136
Query: 453 ASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFG 512
G+ +LH ++HRD+KP+N+++ +D K+ DFGLAR T T V T
Sbjct: 137 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRY 191
Query: 513 YMDPELMRTGKASTSTDVYAFGVFMLEVASG 543
Y PE++ + D+++ G M E+ G
Sbjct: 192 YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|1FYU|A Chain A, Crystal Structure Of Erythrina Corallodendron Lectin In
Hexagonal Crystal Form
pdb|1FYU|B Chain B, Crystal Structure Of Erythrina Corallodendron Lectin In
Hexagonal Crystal Form
Length = 255
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 105/250 (42%), Gaps = 44/250 (17%)
Query: 36 NEDAQLQRDGLASVHSNGLLQLTNT-----VSPQQEGHAFYRLPIK-FNTXXXXXXXXXX 89
N++ LQ G A + +G+LQLT + G Y P+ ++
Sbjct: 15 NDNLTLQ--GAALITQSGVLQLTKINQNGMPAWDSTGRTLYAKPVHIWDMTTGTVASFET 72
Query: 90 NFVFAI-----------GMAFVISPSKDLGKAEASPSEYLGLFNASNNGQSTNHILAIEL 138
F F+I G+ F + P+K A YLG+FN S S L +E
Sbjct: 73 RFSFSIEQPYTRPLPADGLVFFMGPTK---SKPAQGYGYLGIFNNSKQDNSY-QTLGVEF 128
Query: 139 DTVQNLDFDDIDDNHVGIDVNSLISHESAPAAYFSDREGMNKTLELIIGDPIQIWISYDG 198
DT N +D H+GIDVNS+ S ++ P +L G + I YD
Sbjct: 129 DTFSN-PWDPPQVPHIGIDVNSIRSIKTQP-------------FQLDNGQVANVVIKYDA 174
Query: 199 AEKLLNVTLA-PMSIPKPTKPLLSRAINLSHILLETMYVGFSASTGSLK---SSHYVLGW 254
+ K+L+ L P S T ++ +++ +L E + VG S +TG+ + +H V W
Sbjct: 175 SSKILHAVLVYPSSGAIYT---IAEIVDVKQVLPEWVDVGLSGATGAQRDAAETHDVYSW 231
Query: 255 SFNRSGPALN 264
SF S P N
Sbjct: 232 SFQASLPETN 241
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 101/211 (47%), Gaps = 17/211 (8%)
Query: 341 YKATKGFKDKDVIGRGGFGKV---YRGVLASNVQIAVKKVSH--DSKQGIKEFVAELVSM 395
+ K +++ IG G G V Y +L NV A+KK+S ++ K ELV M
Sbjct: 20 FTVLKRYQNLKPIGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELVLM 77
Query: 396 GRLRHRNLVKLRG-YCRRKG--EFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGV 452
+ H+N++ L + +K EF VY M +D L I+ L+ + ++ +
Sbjct: 78 KVVNHKNIIGLLNVFTPQKSLEEFQDVYIVM--ELMDANLSQVIQMELDHERMSYLLYQM 135
Query: 453 ASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFG 512
G+ +LH ++HRD+KP+N+++ +D K+ DFGLAR T T V T
Sbjct: 136 LVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRY 190
Query: 513 YMDPELMRTGKASTSTDVYAFGVFMLEVASG 543
Y PE++ + D+++ G M E+ G
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 28/216 (12%)
Query: 351 DVIGRGGFGKVYRGVLASNVQIAVKKVSHDSK--QGIKEFVAELVSMGRLRHRNLVKL-- 406
D++G+G V+RG + KV ++ + + + E + +L H+N+VKL
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFA 74
Query: 407 ---RGYCRRKGEFLLVYDYMPNGSLDKILHTNIKP-CLNWYQRFRIIRGVASGLLYLHED 462
R K +L+ ++ P GSL +L L + ++R V G+ +L E+
Sbjct: 75 IEEETTTRHK---VLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN 131
Query: 463 WEQVVLHRDIKPANVLLDADLNG----KLGDFGLARLYDHDTIPQTTKLVGTFGYMDPEL 518
++HR+IKP N++ +G KL DFG AR + D Q L GT Y+ P++
Sbjct: 132 G---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE--QFVXLYGTEEYLHPDM 186
Query: 519 MRTG--------KASTSTDVYAFGVFMLEVASGRRP 546
K + D+++ GV A+G P
Sbjct: 187 YERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 105/226 (46%), Gaps = 27/226 (11%)
Query: 340 LYKATKGFKDKDVIGRGGFGKVYRGVLASNVQI-AVKKVS-HDSKQGIKEFVAELVSMGR 397
+Y + F+ K ++G G +G V +I A+KK+ D + E+ +
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKH 65
Query: 398 LRHRNLVKLRGYCRRKG-----EFLLVYDYMPNGSLDKILHTNIKPCLN-WYQRFRIIRG 451
+H N++ + R E ++ + M L +++ T + + Y ++ +R
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVISTQMLSDDHIQYFIYQTLRA 124
Query: 452 VASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQT------- 504
V LH V+HRD+KP+N+L++++ + K+ DFGLAR+ D +
Sbjct: 125 VK----VLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 505 --TKLVGTFGYMDPELMRT-GKASTSTDVYAFGVFMLEVASGRRPV 547
T+ V T Y PE+M T K S + DV++ G + E+ RRP+
Sbjct: 178 GMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPI 222
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 104/222 (46%), Gaps = 23/222 (10%)
Query: 352 VIGRGGFGKVYRGVL---ASNVQIAVK-KV--SHDSKQGIKEFVAELVSMGRLRHRNLVK 405
V+G G FG VY+G+ NV+I V KV + S + KE + E M + + +
Sbjct: 24 VLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSR 83
Query: 406 LRGYCRRKGEFLLVYDYMPNGSLDKILHTN-----IKPCLNWYQRFRIIRGVASGLLYLH 460
L G C LV MP G L + N + LNW + +A G+ YL
Sbjct: 84 LLGICL-TSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQ------IAKGMSYLE 136
Query: 461 EDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHD-TIPQTTKLVGTFGYMDPELM 519
+ ++HRD+ NVL+ + + K+ DFGLARL D D T +M E +
Sbjct: 137 D---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESI 193
Query: 520 RTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVD 560
+ + +DV+++GV + E+ + G +P + + E +L++
Sbjct: 194 LRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLE 235
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 105/229 (45%), Gaps = 33/229 (14%)
Query: 340 LYKATKGFKDKDVIGRGGFGKVYRGVLASNVQI-AVKKVS-HDSKQGIKEFVAELVSMGR 397
+Y + F+ K ++G G +G V +I A+KK+ D + E+ +
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKH 65
Query: 398 LRHRNLVKLRGYCRRKG-----EFLLVYDYMPNGSLDKILHTNI--KPCLNW--YQRFRI 448
+H N++ + R E ++ + M L +++ T + + + YQ R
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVISTQMLSDDHIQYFIYQTLRA 124
Query: 449 IRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQT---- 504
++ V G V+HRD+KP+N+L++++ + K+ DFGLAR+ D +
Sbjct: 125 VK-VLHG---------SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTG 174
Query: 505 -----TKLVGTFGYMDPELMRT-GKASTSTDVYAFGVFMLEVASGRRPV 547
T+ V T Y PE+M T K S + DV++ G + E+ RRP+
Sbjct: 175 QQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPI 222
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 101/211 (47%), Gaps = 17/211 (8%)
Query: 341 YKATKGFKDKDVIGRGGFGKV---YRGVLASNVQIAVKKVSH--DSKQGIKEFVAELVSM 395
+ K +++ IG G G V Y +L NV A+KK+S ++ K ELV M
Sbjct: 20 FTVLKRYQNLKPIGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELVLM 77
Query: 396 GRLRHRNLVKLRG-YCRRKG--EFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGV 452
+ H+N++ L + +K EF VY M +D L I+ L+ + ++ +
Sbjct: 78 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVM--ELMDANLCQVIQMELDHERMSYLLYQM 135
Query: 453 ASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFG 512
G+ +LH ++HRD+KP+N+++ +D K+ DFGLAR T T V T
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPEVVTRY 190
Query: 513 YMDPELMRTGKASTSTDVYAFGVFMLEVASG 543
Y PE++ + D+++ G M E+ G
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 93/214 (43%), Gaps = 13/214 (6%)
Query: 352 VIGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRL----RHRNLVKLR 407
++G+G FGKV + + K+ K+ VA ++ R+ RH L L+
Sbjct: 17 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALK 76
Query: 408 GYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVV 467
+ V +Y G L H + + + + + S L YLH E+ V
Sbjct: 77 YSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFYGAEIVSALDYLHS--EKNV 132
Query: 468 LHRDIKPANVLLDADLNGKLGDFGLAR--LYDHDTIPQTTKLVGTFGYMDPELMRTGKAS 525
++RD+K N++LD D + K+ DFGL + + D T+ GT Y+ PE++
Sbjct: 133 VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM---KXFCGTPEYLAPEVLEDNDYG 189
Query: 526 TSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLV 559
+ D + GV M E+ GR P Q + L+
Sbjct: 190 RAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI 223
>pdb|1SFY|A Chain A, Crystal Structure Of Recombinant Erythrina Corallodandron
Lectin
pdb|1SFY|B Chain B, Crystal Structure Of Recombinant Erythrina Corallodandron
Lectin
pdb|1SFY|C Chain C, Crystal Structure Of Recombinant Erythrina Corallodandron
Lectin
pdb|1SFY|D Chain D, Crystal Structure Of Recombinant Erythrina Corallodandron
Lectin
pdb|1SFY|E Chain E, Crystal Structure Of Recombinant Erythrina Corallodandron
Lectin
pdb|1SFY|F Chain F, Crystal Structure Of Recombinant Erythrina Corallodandron
Lectin
Length = 239
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 104/247 (42%), Gaps = 44/247 (17%)
Query: 36 NEDAQLQRDGLASVHSNGLLQLTNT-----VSPQQEGHAFYRLPIK-FNTXXXXXXXXXX 89
N++ LQ G + + +G+LQLT + G Y P+ ++
Sbjct: 15 NDNLTLQ--GASLITQSGVLQLTKINQNGMPAWDSTGRTLYAKPVHIWDMTTGTVASFET 72
Query: 90 NFVFAI-----------GMAFVISPSKDLGKAEASPSEYLGLFNASNNGQSTNHILAIEL 138
F F+I G+ F + P+K A YLG+FN S S L +E
Sbjct: 73 RFSFSIEQPYTRPLPADGLVFFMGPTK---SKPAQGYGYLGIFNNSKQDNSY-QTLGVEF 128
Query: 139 DTVQNLDFDDIDDNHVGIDVNSLISHESAPAAYFSDREGMNKTLELIIGDPIQIWISYDG 198
DT N +D H+GIDVNS+ S ++ P +L G + I YD
Sbjct: 129 DTFSN-QWDPPQVPHIGIDVNSIRSIKTQP-------------FQLDNGQVANVVIKYDA 174
Query: 199 AEKLLNVTLA-PMSIPKPTKPLLSRAINLSHILLETMYVGFSASTGSLK---SSHYVLGW 254
+ KLL+ L P S T ++ +++ +L E + VG S +TG+ + +H V W
Sbjct: 175 SSKLLHAVLVYPSSGAIYT---IAEIVDVKQVLPEWVDVGLSGATGAQRDAAETHDVYSW 231
Query: 255 SFNRSGP 261
SF S P
Sbjct: 232 SFQASLP 238
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 92/215 (42%), Gaps = 16/215 (7%)
Query: 352 VIGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRL----RHRNLVKLR 407
++G+G FGKV + + K+ K+ VA V+ R+ RH L L+
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK 71
Query: 408 GYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRG-VASGLLYLHEDWEQV 466
+ V +Y G L H + + +R R + S L YLH +
Sbjct: 72 YAFQTHDRLCFVMEYANGGEL--FFHLSRERVFT-EERARFYGAEIVSALEYLHS---RD 125
Query: 467 VLHRDIKPANVLLDADLNGKLGDFGLAR--LYDHDTIPQTTKLVGTFGYMDPELMRTGKA 524
V++RDIK N++LD D + K+ DFGL + + D T+ GT Y+ PE++
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM---KXFCGTPEYLAPEVLEDNDY 182
Query: 525 STSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLV 559
+ D + GV M E+ GR P Q L+
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI 217
>pdb|1LTE|A Chain A, Structure Of A Legume Lectin With An Ordered N-Linked
Carbohydrate In Complex With Lactose
Length = 239
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 104/247 (42%), Gaps = 44/247 (17%)
Query: 36 NEDAQLQRDGLASVHSNGLLQLTNT-----VSPQQEGHAFYRLPIK-FNTXXXXXXXXXX 89
N++ LQ G + + +G+LQLT + G Y P+ ++
Sbjct: 15 NDNLTLQ--GASLITQSGVLQLTKINQNGMPAWDSTGRTLYAKPVHIWDMTTGTVASFET 72
Query: 90 NFVFAI-----------GMAFVISPSKDLGKAEASPSEYLGLFNASNNGQSTNHILAIEL 138
F F+I G+ F + P+K A YLG+FN S S L +E
Sbjct: 73 RFSFSIEQPYTRPLPADGLVFFMGPTK---SKPAQGYGYLGIFNQSKQDNSY-QTLGVEF 128
Query: 139 DTVQNLDFDDIDDNHVGIDVNSLISHESAPAAYFSDREGMNKTLELIIGDPIQIWISYDG 198
DT N +D H+GIDVNS+ S ++ P +L G + I YD
Sbjct: 129 DTFSN-PWDPPQVPHIGIDVNSIRSIKTQP-------------FQLDNGQVANVVIKYDA 174
Query: 199 AEKLLNVTLA-PMSIPKPTKPLLSRAINLSHILLETMYVGFSASTGSLK---SSHYVLGW 254
+ KLL+ L P S T ++ +++ +L E + VG S +TG+ + +H V W
Sbjct: 175 SSKLLHAVLVYPSSGAIYT---IAEIVDVKQVLPEWVDVGLSGATGAQRDAAETHDVYSW 231
Query: 255 SFNRSGP 261
SF S P
Sbjct: 232 SFQASLP 238
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 93/214 (43%), Gaps = 13/214 (6%)
Query: 352 VIGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRL----RHRNLVKLR 407
++G+G FGKV + + K+ K+ VA ++ R+ RH L L+
Sbjct: 16 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALK 75
Query: 408 GYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVV 467
+ V +Y G L H + + + + + S L YLH E+ V
Sbjct: 76 YSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFYGAEIVSALDYLHS--EKNV 131
Query: 468 LHRDIKPANVLLDADLNGKLGDFGLAR--LYDHDTIPQTTKLVGTFGYMDPELMRTGKAS 525
++RD+K N++LD D + K+ DFGL + + D T+ GT Y+ PE++
Sbjct: 132 VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM---KXFCGTPEYLAPEVLEDNDYG 188
Query: 526 TSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLV 559
+ D + GV M E+ GR P Q + L+
Sbjct: 189 RAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI 222
>pdb|1AX0|A Chain A, Erythrina Corallodendron Lectin In Complex With
N-Actylgalactosamine
pdb|1AX1|A Chain A, Erythrina Corallodendron Lectin In Complex With Lactose
pdb|1AX2|A Chain A, Erythrina Corallodendron Lectin In Complex With
N-Acetyllactosamine
pdb|1AXY|A Chain A, Erythrina Corallodendron Lectin
pdb|1AXZ|A Chain A, Erythrina Corallodendron Lectin In Complex With
D-Galactose
Length = 239
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 104/247 (42%), Gaps = 44/247 (17%)
Query: 36 NEDAQLQRDGLASVHSNGLLQLTNT-----VSPQQEGHAFYRLPIK-FNTXXXXXXXXXX 89
N++ LQ G A + +G+LQLT + G Y P+ ++
Sbjct: 15 NDNLTLQ--GAALITQSGVLQLTKINQNGMPAWDSTGRTLYAKPVHIWDMTTGTVASFET 72
Query: 90 NFVFAI-----------GMAFVISPSKDLGKAEASPSEYLGLFNASNNGQSTNHILAIEL 138
F F+I G+ F + P+K A YLG+FN S S L +E
Sbjct: 73 RFSFSIEQPYTRPLPADGLVFFMGPTK---SKPAQGYGYLGIFNNSKQDNSY-QTLGVEF 128
Query: 139 DTVQNLDFDDIDDNHVGIDVNSLISHESAPAAYFSDREGMNKTLELIIGDPIQIWISYDG 198
DT N +D H+GIDVNS+ S ++ P +L G + I YD
Sbjct: 129 DTFSN-PWDPPQVPHIGIDVNSIRSIKTQP-------------FQLDNGQVANVVIKYDA 174
Query: 199 AEKLLNVTLA-PMSIPKPTKPLLSRAINLSHILLETMYVGFSASTGSLK---SSHYVLGW 254
+ K+L+ L P S T ++ +++ +L E + VG S +TG+ + +H V W
Sbjct: 175 SSKILHAVLVYPSSGAIYT---IAEIVDVKQVLPEWVDVGLSGATGAQRDAAETHDVYSW 231
Query: 255 SFNRSGP 261
SF S P
Sbjct: 232 SFQASLP 238
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 92/215 (42%), Gaps = 16/215 (7%)
Query: 352 VIGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRL----RHRNLVKLR 407
++G+G FGKV + + K+ K+ VA V+ R+ RH L L+
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK 71
Query: 408 GYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRG-VASGLLYLHEDWEQV 466
+ V +Y G L H + + +R R + S L YLH +
Sbjct: 72 YAFQTHDRLCFVMEYANGGEL--FFHLSRERVFT-EERARFYGAEIVSALEYLHS---RD 125
Query: 467 VLHRDIKPANVLLDADLNGKLGDFGLAR--LYDHDTIPQTTKLVGTFGYMDPELMRTGKA 524
V++RDIK N++LD D + K+ DFGL + + D T+ GT Y+ PE++
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM---KXFCGTPEYLAPEVLEDNDY 182
Query: 525 STSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLV 559
+ D + GV M E+ GR P Q L+
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI 217
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 101/212 (47%), Gaps = 17/212 (8%)
Query: 341 YKATKGFKDKDVIGRGGFGKV---YRGVLASNVQIAVKKVSH--DSKQGIKEFVAELVSM 395
+ K +++ IG G G V Y VL NV A+KK+S ++ K ELV M
Sbjct: 20 FTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNV--AIKKLSRPFQNQTHAKRAYRELVLM 77
Query: 396 GRLRHRNLVKLRG-YCRRKG--EFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGV 452
+ H+N++ L + +K EF VY M +D L I+ L+ + ++ +
Sbjct: 78 KXVNHKNIISLLNVFTPQKTLEEFQDVYLVM--ELMDANLXQVIQMELDHERMSYLLYQM 135
Query: 453 ASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFG 512
G+ +LH ++HRD+KP+N+++ +D K+ DFGLAR T T V T
Sbjct: 136 LXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRY 190
Query: 513 YMDPELMRTGKASTSTDVYAFGVFMLEVASGR 544
Y PE++ + D+++ G M E+ +
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 93/214 (43%), Gaps = 13/214 (6%)
Query: 352 VIGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRL----RHRNLVKLR 407
++G+G FGKV + + K+ K+ VA ++ R+ RH L L+
Sbjct: 15 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALK 74
Query: 408 GYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVV 467
+ V +Y G L H + + + + + S L YLH E+ V
Sbjct: 75 YSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFYGAEIVSALDYLHS--EKNV 130
Query: 468 LHRDIKPANVLLDADLNGKLGDFGLAR--LYDHDTIPQTTKLVGTFGYMDPELMRTGKAS 525
++RD+K N++LD D + K+ DFGL + + D T+ GT Y+ PE++
Sbjct: 131 VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM---KXFCGTPEYLAPEVLEDNDYG 187
Query: 526 TSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLV 559
+ D + GV M E+ GR P Q + L+
Sbjct: 188 RAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI 221
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 100/210 (47%), Gaps = 16/210 (7%)
Query: 353 IGRGGFGKVYRGVLASNVQI-AVKKV-SHDSKQGIKEFVAEL-VSMGRLRHRNLVKLRGY 409
+GRG +G V + + QI AVK++ + + Q K + +L +SM + V G
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 74
Query: 410 CRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRF--RIIRGVASGLLYLHEDWEQVV 467
R+G+ + + M + SLDK I + +I + L +LH V
Sbjct: 75 LFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS--V 131
Query: 468 LHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYM-----DPELMRTG 522
+HRD+KP+NVL++A K+ DFG++ D G YM +PEL + G
Sbjct: 132 IHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDID--AGCKPYMAPERINPELNQKG 189
Query: 523 KASTSTDVYAFGVFMLEVASGRRPVEQQGS 552
S +D+++ G+ M+E+A R P + G+
Sbjct: 190 -YSVKSDIWSLGITMIELAILRFPYDSWGT 218
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 92/207 (44%), Gaps = 15/207 (7%)
Query: 351 DVIGRGGFGKVYRGV-LASNVQIAVK-----KVSHDSKQGIKEFVAELVSMGRLRHRNLV 404
+VIG+G F V R + + Q AVK K + ++ E L+H ++V
Sbjct: 30 EVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89
Query: 405 KLRGYCRRKGEFLLVYDYMPNGSL--DKILHTNIKPCLNWYQRFRIIRGVASGLLYLHED 462
+L G +V+++M L + + + + +R + L Y H++
Sbjct: 90 ELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN 149
Query: 463 WEQVVLHRDIKPANVLLDADLNG---KLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELM 519
++HRD+KP NVLL + N KLGDFG+A + + VGT +M PE++
Sbjct: 150 ---NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGR-VGTPHFMAPEVV 205
Query: 520 RTGKASTSTDVYAFGVFMLEVASGRRP 546
+ DV+ GV + + SG P
Sbjct: 206 KREPYGKPVDVWGCGVILFILLSGCLP 232
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 91/203 (44%), Gaps = 16/203 (7%)
Query: 353 IGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCR 411
+GRG FG+V+R + Q AVKKV + + V ELV+ L +V L G R
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAVR 136
Query: 412 RKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRD 471
+ + + GSL +++ CL + + GL YLH + +LH D
Sbjct: 137 EGPWVNIFMELLEGGSLGQLIKQ--MGCLPEDRALYYLGQALEGLEYLHT---RRILHGD 191
Query: 472 IKPANVLLDADLN-GKLGDFGLARLYDHDTIPQTT----KLVGTFGYMDPELMRTGKAST 526
+K NVLL +D + L DFG A D + ++ + GT +M PE++
Sbjct: 192 VKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDA 251
Query: 527 STDVYAFGVFMLEVASGRRPVEQ 549
D+++ ML + +G P Q
Sbjct: 252 KVDIWSSCCMMLHMLNGCHPWTQ 274
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 91/203 (44%), Gaps = 16/203 (7%)
Query: 353 IGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCR 411
+GRG FG+V+R + Q AVKKV + + V ELV+ L +V L G R
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAVR 120
Query: 412 RKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRD 471
+ + + GSL +++ CL + + GL YLH + +LH D
Sbjct: 121 EGPWVNIFMELLEGGSLGQLIKQ--MGCLPEDRALYYLGQALEGLEYLHT---RRILHGD 175
Query: 472 IKPANVLLDADLN-GKLGDFGLARLYDHDTIPQTT----KLVGTFGYMDPELMRTGKAST 526
+K NVLL +D + L DFG A D + ++ + GT +M PE++
Sbjct: 176 VKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDA 235
Query: 527 STDVYAFGVFMLEVASGRRPVEQ 549
D+++ ML + +G P Q
Sbjct: 236 KVDIWSSCCMMLHMLNGCHPWTQ 258
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 101/212 (47%), Gaps = 17/212 (8%)
Query: 341 YKATKGFKDKDVIGRGGFGKV---YRGVLASNVQIAVKKVSH--DSKQGIKEFVAELVSM 395
+ K +++ IG G G V Y VL NV A+KK+S ++ K ELV M
Sbjct: 20 FTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNV--AIKKLSRPFQNQTHAKRAYRELVLM 77
Query: 396 GRLRHRNLVKLRG-YCRRKG--EFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGV 452
+ H+N++ L + +K EF VY M +D L I+ L+ + ++ +
Sbjct: 78 KXVNHKNIISLLNVFTPQKTLEEFQDVYLVM--ELMDANLXQVIQMELDHERMSYLLYQM 135
Query: 453 ASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFG 512
G+ +LH ++HRD+KP+N+++ +D K+ DFGLAR T T V T
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRY 190
Query: 513 YMDPELMRTGKASTSTDVYAFGVFMLEVASGR 544
Y PE++ + D+++ G M E+ +
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 341 YKATKGFKDKDVIGRGGFGKV---YRGVLASNVQIAVKKVSH--DSKQGIKEFVAELVSM 395
+ K +++ IG G G V Y +L NV A+KK+S ++ K ELV M
Sbjct: 22 FTVLKRYQNLKPIGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELVLM 79
Query: 396 GRLRHRNLVKLRG-YCRRKG--EFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGV 452
+ H+N++ L + +K EF VY M +D L I+ L+ + ++ +
Sbjct: 80 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVM--ELMDANLCQVIQMELDHERMSYLLYQM 137
Query: 453 ASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFG 512
G+ +LH ++HRD+KP+N+++ +D K+ DFGLAR T V T
Sbjct: 138 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMVPFVVTRY 192
Query: 513 YMDPELMRTGKASTSTDVYAFGVFMLEVASG 543
Y PE++ + D+++ G M E+ G
Sbjct: 193 YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 101/212 (47%), Gaps = 17/212 (8%)
Query: 341 YKATKGFKDKDVIGRGGFGKV---YRGVLASNVQIAVKKVSH--DSKQGIKEFVAELVSM 395
+ K +++ IG G G V Y VL NV A+KK+S ++ K ELV M
Sbjct: 58 FTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNV--AIKKLSRPFQNQTHAKRAYRELVLM 115
Query: 396 GRLRHRNLVKLRG-YCRRKG--EFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGV 452
+ H+N++ L + +K EF VY M +D L I+ L+ + ++ +
Sbjct: 116 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVM--ELMDANLCQVIQMELDHERMSYLLYQM 173
Query: 453 ASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFG 512
G+ +LH ++HRD+KP+N+++ +D K+ DFGLAR T T V T
Sbjct: 174 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRY 228
Query: 513 YMDPELMRTGKASTSTDVYAFGVFMLEVASGR 544
Y PE++ + D+++ G M E+ +
Sbjct: 229 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 101/212 (47%), Gaps = 17/212 (8%)
Query: 341 YKATKGFKDKDVIGRGGFGKV---YRGVLASNVQIAVKKVSH--DSKQGIKEFVAELVSM 395
+ K +++ IG G G V Y VL NV A+KK+S ++ K ELV M
Sbjct: 20 FTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNV--AIKKLSRPFQNQTHAKRAYRELVLM 77
Query: 396 GRLRHRNLVKLRG-YCRRKG--EFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGV 452
+ H+N++ L + +K EF VY M +D L I+ L+ + ++ +
Sbjct: 78 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVM--ELMDANLXQVIQMELDHERMSYLLYQM 135
Query: 453 ASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFG 512
G+ +LH ++HRD+KP+N+++ +D K+ DFGLAR T T V T
Sbjct: 136 LXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRY 190
Query: 513 YMDPELMRTGKASTSTDVYAFGVFMLEVASGR 544
Y PE++ + D+++ G M E+ +
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 101/212 (47%), Gaps = 17/212 (8%)
Query: 341 YKATKGFKDKDVIGRGGFGKV---YRGVLASNVQIAVKKVSH--DSKQGIKEFVAELVSM 395
+ K +++ IG G G V Y VL NV A+KK+S ++ K ELV M
Sbjct: 13 FTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNV--AIKKLSRPFQNQTHAKRAYRELVLM 70
Query: 396 GRLRHRNLVKLRG-YCRRKG--EFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGV 452
+ H+N++ L + +K EF VY M +D L I+ L+ + ++ +
Sbjct: 71 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVM--ELMDANLCQVIQMELDHERMSYLLYQM 128
Query: 453 ASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFG 512
G+ +LH ++HRD+KP+N+++ +D K+ DFGLAR T T V T
Sbjct: 129 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRY 183
Query: 513 YMDPELMRTGKASTSTDVYAFGVFMLEVASGR 544
Y PE++ + D+++ G M E+ +
Sbjct: 184 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 101/212 (47%), Gaps = 17/212 (8%)
Query: 341 YKATKGFKDKDVIGRGGFGKV---YRGVLASNVQIAVKKVSH--DSKQGIKEFVAELVSM 395
+ K +++ IG G G V Y VL NV A+KK+S ++ K ELV M
Sbjct: 14 FTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNV--AIKKLSRPFQNQTHAKRAYRELVLM 71
Query: 396 GRLRHRNLVKLRG-YCRRKG--EFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGV 452
+ H+N++ L + +K EF VY M +D L I+ L+ + ++ +
Sbjct: 72 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVM--ELMDANLCQVIQMELDHERMSYLLYQM 129
Query: 453 ASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFG 512
G+ +LH ++HRD+KP+N+++ +D K+ DFGLAR T T V T
Sbjct: 130 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRY 184
Query: 513 YMDPELMRTGKASTSTDVYAFGVFMLEVASGR 544
Y PE++ + D+++ G M E+ +
Sbjct: 185 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 85/168 (50%), Gaps = 14/168 (8%)
Query: 385 IKEFVAELVSMGRLRHRNLVKLRGYCRRKGE--FLLVYDYMPNGSLDKILHTNIKPCLNW 442
I++ E+ + +L H N+VKL E +V++ + G + ++ +KP
Sbjct: 80 IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV--PTLKPLSED 137
Query: 443 YQRFRIIRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYD-HDTI 501
RF + + G+ YLH Q ++HRDIKP+N+L+ D + K+ DFG++ + D +
Sbjct: 138 QARF-YFQDLIKGIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDAL 193
Query: 502 PQTTKLVGTFGYMDPE-LMRTGK--ASTSTDVYAFGVFMLEVASGRRP 546
T VGT +M PE L T K + + DV+A GV + G+ P
Sbjct: 194 LSNT--VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP 239
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 101/212 (47%), Gaps = 17/212 (8%)
Query: 341 YKATKGFKDKDVIGRGGFGKV---YRGVLASNVQIAVKKVSH--DSKQGIKEFVAELVSM 395
+ K +++ IG G G V Y VL NV A+KK+S ++ K ELV M
Sbjct: 20 FTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNV--AIKKLSRPFQNQTHAKRAYRELVLM 77
Query: 396 GRLRHRNLVKLRG-YCRRKG--EFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGV 452
+ H+N++ L + +K EF VY M +D L I+ L+ + ++ +
Sbjct: 78 KXVNHKNIISLLNVFTPQKTLEEFQDVYLVM--ELMDANLCQVIQMELDHERMSYLLYQM 135
Query: 453 ASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFG 512
G+ +LH ++HRD+KP+N+++ +D K+ DFGLAR T T V T
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRY 190
Query: 513 YMDPELMRTGKASTSTDVYAFGVFMLEVASGR 544
Y PE++ + D+++ G M E+ +
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 101/212 (47%), Gaps = 17/212 (8%)
Query: 341 YKATKGFKDKDVIGRGGFGKV---YRGVLASNVQIAVKKVSH--DSKQGIKEFVAELVSM 395
+ K +++ IG G G V Y VL NV A+KK+S ++ K ELV M
Sbjct: 58 FTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNV--AIKKLSRPFQNQTHAKRAYRELVLM 115
Query: 396 GRLRHRNLVKLRG-YCRRKG--EFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGV 452
+ H+N++ L + +K EF VY M +D L I+ L+ + ++ +
Sbjct: 116 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVM--ELMDANLCQVIQMELDHERMSYLLYQM 173
Query: 453 ASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFG 512
G+ +LH ++HRD+KP+N+++ +D K+ DFGLAR T T V T
Sbjct: 174 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRY 228
Query: 513 YMDPELMRTGKASTSTDVYAFGVFMLEVASGR 544
Y PE++ + D+++ G M E+ +
Sbjct: 229 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 101/212 (47%), Gaps = 17/212 (8%)
Query: 341 YKATKGFKDKDVIGRGGFGKV---YRGVLASNVQIAVKKVSH--DSKQGIKEFVAELVSM 395
+ K +++ IG G G V Y VL NV A+KK+S ++ K ELV M
Sbjct: 14 FTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNV--AIKKLSRPFQNQTHAKRAYRELVLM 71
Query: 396 GRLRHRNLVKLRG-YCRRKG--EFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGV 452
+ H+N++ L + +K EF VY M +D L I+ L+ + ++ +
Sbjct: 72 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVM--ELMDANLCQVIQMELDHERMSYLLYQM 129
Query: 453 ASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFG 512
G+ +LH ++HRD+KP+N+++ +D K+ DFGLAR T T V T
Sbjct: 130 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRY 184
Query: 513 YMDPELMRTGKASTSTDVYAFGVFMLEVASGR 544
Y PE++ + D+++ G M E+ +
Sbjct: 185 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 91/203 (44%), Gaps = 16/203 (7%)
Query: 353 IGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKLRGYCR 411
+GRG FG+V+R + Q AVKKV + + V ELV+ L +V L G R
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAVR 134
Query: 412 RKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRD 471
+ + + GSL +++ CL + + GL YLH + +LH D
Sbjct: 135 EGPWVNIFMELLEGGSLGQLIKQ--MGCLPEDRALYYLGQALEGLEYLHT---RRILHGD 189
Query: 472 IKPANVLLDADLN-GKLGDFGLARLYDHDTIPQTT----KLVGTFGYMDPELMRTGKAST 526
+K NVLL +D + L DFG A D + ++ + GT +M PE++
Sbjct: 190 VKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDA 249
Query: 527 STDVYAFGVFMLEVASGRRPVEQ 549
D+++ ML + +G P Q
Sbjct: 250 KVDIWSSCCMMLHMLNGCHPWTQ 272
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 104/226 (46%), Gaps = 27/226 (11%)
Query: 340 LYKATKGFKDKDVIGRGGFGKVYRGVLASNVQI-AVKKVS-HDSKQGIKEFVAELVSMGR 397
+Y + F+ K ++G G +G V +I A+KK+ D + E+ +
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKH 65
Query: 398 LRHRNLVKLRGYCRRKG-----EFLLVYDYMPNGSLDKILHTNIKPCLN-WYQRFRIIRG 451
+H N++ + R E ++ + M L +++ T + + Y ++ +R
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVISTQMLSDDHIQYFIYQTLRA 124
Query: 452 VASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQT------- 504
V LH V+HRD+KP+N+L++++ + K+ DFGLAR+ D +
Sbjct: 125 VK----VLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 505 --TKLVGTFGYMDPELMRT-GKASTSTDVYAFGVFMLEVASGRRPV 547
+ V T Y PE+M T K S + DV++ G + E+ RRP+
Sbjct: 178 GMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPI 222
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 101/212 (47%), Gaps = 17/212 (8%)
Query: 341 YKATKGFKDKDVIGRGGFGKV---YRGVLASNVQIAVKKVSH--DSKQGIKEFVAELVSM 395
+ K +++ IG G G V Y VL NV A+KK+S ++ K ELV M
Sbjct: 13 FTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNV--AIKKLSRPFQNQTHAKRAYRELVLM 70
Query: 396 GRLRHRNLVKLRG-YCRRKG--EFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGV 452
+ H+N++ L + +K EF VY M +D L I+ L+ + ++ +
Sbjct: 71 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVM--ELMDANLXQVIQMELDHERMSYLLYQM 128
Query: 453 ASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFG 512
G+ +LH ++HRD+KP+N+++ +D K+ DFGLAR T T V T
Sbjct: 129 LXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRY 183
Query: 513 YMDPELMRTGKASTSTDVYAFGVFMLEVASGR 544
Y PE++ + D+++ G M E+ +
Sbjct: 184 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 101/212 (47%), Gaps = 17/212 (8%)
Query: 341 YKATKGFKDKDVIGRGGFGKV---YRGVLASNVQIAVKKVSH--DSKQGIKEFVAELVSM 395
+ K +++ IG G G V Y VL NV A+KK+S ++ K ELV M
Sbjct: 20 FTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNV--AIKKLSRPFQNQTHAKRAYRELVLM 77
Query: 396 GRLRHRNLVKLRG-YCRRKG--EFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGV 452
+ H+N++ L + +K EF VY M +D L I+ L+ + ++ +
Sbjct: 78 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVM--ELMDANLCQVIQMELDHERMSYLLYQM 135
Query: 453 ASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFG 512
G+ +LH ++HRD+KP+N+++ +D K+ DFGLAR T T V T
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRY 190
Query: 513 YMDPELMRTGKASTSTDVYAFGVFMLEVASGR 544
Y PE++ + D+++ G M E+ +
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 101/212 (47%), Gaps = 17/212 (8%)
Query: 341 YKATKGFKDKDVIGRGGFGKV---YRGVLASNVQIAVKKVSH--DSKQGIKEFVAELVSM 395
+ K +++ IG G G V Y VL NV A+KK+S ++ K ELV M
Sbjct: 19 FTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNV--AIKKLSRPFQNQTHAKRAYRELVLM 76
Query: 396 GRLRHRNLVKLRG-YCRRKG--EFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGV 452
+ H+N++ L + +K EF VY M +D L I+ L+ + ++ +
Sbjct: 77 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVM--ELMDANLCQVIQMELDHERMSYLLYQM 134
Query: 453 ASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFG 512
G+ +LH ++HRD+KP+N+++ +D K+ DFGLAR T T V T
Sbjct: 135 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRY 189
Query: 513 YMDPELMRTGKASTSTDVYAFGVFMLEVASGR 544
Y PE++ + D+++ G M E+ +
Sbjct: 190 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 221
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 101/212 (47%), Gaps = 17/212 (8%)
Query: 341 YKATKGFKDKDVIGRGGFGKV---YRGVLASNVQIAVKKVSH--DSKQGIKEFVAELVSM 395
+ K +++ IG G G V Y VL NV A+KK+S ++ K ELV M
Sbjct: 21 FTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNV--AIKKLSRPFQNQTHAKRAYRELVLM 78
Query: 396 GRLRHRNLVKLRG-YCRRKG--EFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGV 452
+ H+N++ L + +K EF VY M +D L I+ L+ + ++ +
Sbjct: 79 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVM--ELMDANLCQVIQMELDHERMSYLLYQM 136
Query: 453 ASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFG 512
G+ +LH ++HRD+KP+N+++ +D K+ DFGLAR T T V T
Sbjct: 137 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRY 191
Query: 513 YMDPELMRTGKASTSTDVYAFGVFMLEVASGR 544
Y PE++ + D+++ G M E+ +
Sbjct: 192 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 101/212 (47%), Gaps = 17/212 (8%)
Query: 341 YKATKGFKDKDVIGRGGFGKV---YRGVLASNVQIAVKKVSH--DSKQGIKEFVAELVSM 395
+ K +++ IG G G V Y VL NV A+KK+S ++ K ELV M
Sbjct: 20 FTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNV--AIKKLSRPFQNQTHAKRAYRELVLM 77
Query: 396 GRLRHRNLVKLRG-YCRRKG--EFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGV 452
+ H+N++ L + +K EF VY M +D L I+ L+ + ++ +
Sbjct: 78 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVM--ELMDANLCQVIQMELDHERMSYLLYQM 135
Query: 453 ASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFG 512
G+ +LH ++HRD+KP+N+++ +D K+ DFGLAR T T V T
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRY 190
Query: 513 YMDPELMRTGKASTSTDVYAFGVFMLEVASGR 544
Y PE++ + D+++ G M E+ +
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 93/204 (45%), Gaps = 18/204 (8%)
Query: 353 IGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGIKEFVAE-LVSMGRLRHRNLVKLRGYC 410
+GRG FG+V+R + Q AVKKV ++ F AE L++ L +V L G
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVR------LEVFRAEELMACAGLTSPRIVPLYGAV 154
Query: 411 RRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHR 470
R + + + GSL +++ + CL + + GL YLH + +LH
Sbjct: 155 REGPWVNIFMELLEGGSLGQLVKE--QGCLPEDRALYYLGQALEGLEYLHS---RRILHG 209
Query: 471 DIKPANVLLDAD-LNGKLGDFGLARLYDHDTIPQTT----KLVGTFGYMDPELMRTGKAS 525
D+K NVLL +D + L DFG A D + ++ + GT +M PE++
Sbjct: 210 DVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCD 269
Query: 526 TSTDVYAFGVFMLEVASGRRPVEQ 549
DV++ ML + +G P Q
Sbjct: 270 AKVDVWSSCCMMLHMLNGCHPWTQ 293
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 101/212 (47%), Gaps = 17/212 (8%)
Query: 341 YKATKGFKDKDVIGRGGFGKV---YRGVLASNVQIAVKKVSH--DSKQGIKEFVAELVSM 395
+ K +++ IG G G V Y VL NV A+KK+S ++ K ELV M
Sbjct: 21 FTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNV--AIKKLSRPFQNQTHAKRAYRELVLM 78
Query: 396 GRLRHRNLVKLRG-YCRRKG--EFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGV 452
+ H+N++ L + +K EF VY M +D L I+ L+ + ++ +
Sbjct: 79 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVM--ELMDANLCQVIQMELDHERMSYLLYQM 136
Query: 453 ASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFG 512
G+ +LH ++HRD+KP+N+++ +D K+ DFGLAR T T V T
Sbjct: 137 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRY 191
Query: 513 YMDPELMRTGKASTSTDVYAFGVFMLEVASGR 544
Y PE++ + D+++ G M E+ +
Sbjct: 192 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 17/212 (8%)
Query: 341 YKATKGFKDKDVIGRGGFGKV---YRGVLASNVQIAVKKVSH--DSKQGIKEFVAELVSM 395
+ K +++ IG G G V Y +L NV A+KK+S ++ K ELV M
Sbjct: 14 FTVLKRYQNLKPIGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELVLM 71
Query: 396 GRLRHRNLVKLRG-YCRRKG--EFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGV 452
+ H+N++ L + +K EF VY M +D L I+ L+ + ++ +
Sbjct: 72 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVM--ELMDANLCQVIQMELDHERMSYLLYQM 129
Query: 453 ASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFG 512
G+ +LH ++HRD+KP+N+++ +D K+ DFGLAR T T V T
Sbjct: 130 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRY 184
Query: 513 YMDPELMRTGKASTSTDVYAFGVFMLEVASGR 544
Y PE++ + D+++ G M E+ +
Sbjct: 185 YRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 216
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 100/244 (40%), Gaps = 20/244 (8%)
Query: 323 YEDWEREYGPQRFTYKDLYKATKGFKDKDVIGRGGFGKVYRGVLASNVQIAVKKVSHD-- 380
Y +W + + + K + + F+ VIGRG FG+V L + ++ K+ +
Sbjct: 55 YLEWAKPFTSK---VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWE 111
Query: 381 --SKQGIKEFVAELVSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKP 438
+ F E + + + L + LV DY G L +L
Sbjct: 112 MLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDR 171
Query: 439 CLNWYQRFRIIRGVAS--GLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLY 496
RF + V + + LH +HRDIKP N+L+D + + +L DFG
Sbjct: 172 LPEEMARFYLAEMVIAIDSVHQLH------YVHRDIKPDNILMDMNGHIRLADFGSCLKL 225
Query: 497 DHDTIPQTTKLVGTFGYMDPELMRT-----GKASTSTDVYAFGVFMLEVASGRRPVEQQG 551
D Q++ VGT Y+ PE+++ G+ D ++ GV M E+ G P +
Sbjct: 226 MEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAES 285
Query: 552 SMET 555
+ET
Sbjct: 286 LVET 289
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 20/211 (9%)
Query: 344 TKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRN 402
+ G+ K+ IG G + + R V A+N++ AVK V SK+ E + L+ G+ H N
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKATNMEYAVK-VIDKSKRDPSEEIEILLRYGQ--HPN 82
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSL-DKILHTNIKPCLNWYQRFRIIRGVASGLLYLHE 461
++ L+ LV + M G L DKIL + + ++ + + YLH
Sbjct: 83 IITLKDVYDDGKHVYLVTELMRGGELLDKILRQKF---FSEREASFVLHTIGKTVEYLHS 139
Query: 462 DWEQVVLHRDIKPANVLLDADLNG-----KLGDFGLAR-LYDHDTIPQTTKLVGTFGYMD 515
Q V+HRD+KP+N+L D +G ++ DFG A+ L + + T F +
Sbjct: 140 ---QGVVHRDLKPSNILY-VDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANF--VA 193
Query: 516 PELMRTGKASTSTDVYAFGVFMLEVASGRRP 546
PE+++ D+++ G+ + + +G P
Sbjct: 194 PEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 118/285 (41%), Gaps = 43/285 (15%)
Query: 353 IGRGGFGKVYRG------VLASNVQIAVKKV----SHDSKQGIKEFVAELVSMGRLRHRN 402
+GRG FG+V A+ +AVK + +H + + + L+ +G H N
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGH--HLN 92
Query: 403 LVKLRGYCRRKG-EFLLVYDYMPNGSLDKILHTN---IKPCLNWYQRFRIIR-------G 451
+V L G C + G +++ ++ G+L L + P + Y+ F +
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQ 152
Query: 452 VASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDHDTIPQTTKLVGT 510
VA G+ +L + +HRD+ N+LL K+ DFGLAR +Y +
Sbjct: 153 VAKGMEFLAS---RKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 209
Query: 511 FGYMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCDCWKKG 569
+M PE + + +DV++FGV + E+ S G P V + + C K+G
Sbjct: 210 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY------PGVKIDEEFCRRLKEG 263
Query: 570 AIRDASDSRLEGICEEKQMELVLKLGLFCSHPKPEARPNMRQVMQ 614
A D + + L C H +P RP ++++
Sbjct: 264 TRMRAPDYTTPEMYQTM---------LDCWHGEPSQRPTFSELVE 299
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 98/211 (46%), Gaps = 25/211 (11%)
Query: 352 VIGRGGFGKVYRGVLASNVQI-AVKKVSHD---SKQGIKEFVAE--LVSMGRLRHRNLVK 405
V+G+G FGKV + + AVK + D ++ + E ++S+ R H L +
Sbjct: 30 VLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLAR-NHPFLTQ 88
Query: 406 LRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRG------VASGLLYL 459
L + V +++ G L + H + +RF R + S L++L
Sbjct: 89 LFCCFQTPDRLFFVMEFVNGGDL--MFH------IQKSRRFDEARARFYAAEIISALMFL 140
Query: 460 HEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELM 519
H+ + +++RD+K NVLLD + + KL DFG+ + + + T GT Y+ PE++
Sbjct: 141 HD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGV-TTATFCGTPDYIAPEIL 196
Query: 520 RTGKASTSTDVYAFGVFMLEVASGRRPVEQQ 550
+ + D +A GV + E+ G P E +
Sbjct: 197 QEMLYGPAVDWWAMGVLLYEMLCGHAPFEAE 227
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 95/208 (45%), Gaps = 11/208 (5%)
Query: 352 VIGRGGFGKVYRGVLASNVQI-AVKKVSHDSKQGIKEFVAELVSMGRL----RHRNLVKL 406
V+G+G FGKV ++ A+K + D + +V L + L +L
Sbjct: 26 VLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQL 85
Query: 407 RGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQV 466
+ V +Y+ G L + H Q ++ GL +LH+ +
Sbjct: 86 HSCFQTVDRLYFVMEYVNGGDL--MYHIQQVGKFKEPQAVFYAAEISIGLFFLHK---RG 140
Query: 467 VLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKAST 526
+++RD+K NV+LD++ + K+ DFG+ + + D + T + GT Y+ PE++
Sbjct: 141 IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGV-TTREFCGTPDYIAPEIIAYQPYGK 199
Query: 527 STDVYAFGVFMLEVASGRRPVEQQGSME 554
S D +A+GV + E+ +G+ P + + E
Sbjct: 200 SVDWWAYGVLLYEMLAGQPPFDGEDEDE 227
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 17/212 (8%)
Query: 341 YKATKGFKDKDVIGRGGFGKV---YRGVLASNVQIAVKKVSH--DSKQGIKEFVAELVSM 395
+ K +++ IG G G V Y +L NV A+KK+S ++ K ELV M
Sbjct: 25 FTVLKRYQNLKPIGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELVLM 82
Query: 396 GRLRHRNLVKLRG-YCRRKG--EFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGV 452
+ H+N++ L + +K EF VY M +D L I+ L+ + ++ +
Sbjct: 83 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVM--ELMDANLCQVIQMELDHERMSYLLYQM 140
Query: 453 ASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFG 512
G+ +LH ++HRD+KP+N+++ +D K+ DFGLAR T T V T
Sbjct: 141 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRY 195
Query: 513 YMDPELMRTGKASTSTDVYAFGVFMLEVASGR 544
Y PE++ + D+++ G M E+ +
Sbjct: 196 YRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 227
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 378 SHDSKQGIK----EFVAELVSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDK--- 430
S++ K IK +F EL + +++ + G E ++Y+YM N S+ K
Sbjct: 76 SNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDE 135
Query: 431 ---ILHTNIKPCLNWYQRFR-IIRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGK 486
+L N C Q + II+ V + Y+H E+ + HRD+KP+N+L+D + K
Sbjct: 136 YFFVLDKNY-TCFIPIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVK 192
Query: 487 LGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKA--STSTDVYAFGV 535
L DFG + I + GT+ +M PE + D+++ G+
Sbjct: 193 LSDFGESEYMVDKKIKGSR---GTYEFMPPEFFSNESSYNGAKVDIWSLGI 240
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 95/207 (45%), Gaps = 19/207 (9%)
Query: 347 FKDKDVIGRGGFGKVYRGVLASNVQI----AVKKVSHDSKQGIKEFVAELVSMGRLRHRN 402
F+ IG G FG+V +L +++ A+K + +K+ L L+ N
Sbjct: 43 FERIKTIGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 403 ---LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYL 459
LVKL + +V +YMP G + L I + RF + V + YL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLR-RIGRFSEPHARFYAAQIVLT-FEYL 157
Query: 460 HEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELM 519
H +++RD+KP N+L+D K+ DFG A+ +T L GT Y+ PE++
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK----RVKGRTWXLCGTPEYLAPEII 210
Query: 520 RTGKASTSTDVYAFGVFMLEVASGRRP 546
+ + + D +A GV + E+A+G P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 96/212 (45%), Gaps = 16/212 (7%)
Query: 352 VIGRGGFGKVY--RGVLASNV-----QIAVKKVSHDSKQGIKEFV-AELVSMGRLRHRN- 402
V+G G +GKV+ R + + +KK + K E E + +R
Sbjct: 61 VLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPF 120
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHED 462
LV L + + + L+ DY+ G L H + + ++ + + L +LH+
Sbjct: 121 LVTLHYAFQTETKLHLILDYINGGEL--FTHLSQRERFTEHEVQIYVGEIVLALEHLHK- 177
Query: 463 WEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTG 522
+++RDIK N+LLD++ + L DFGL++ + D + GT YM P+++R G
Sbjct: 178 --LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGG 235
Query: 523 KA--STSTDVYAFGVFMLEVASGRRPVEQQGS 552
+ + D ++ GV M E+ +G P G
Sbjct: 236 DSGHDKAVDWWSLGVLMYELLTGASPFTVDGE 267
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 95/207 (45%), Gaps = 19/207 (9%)
Query: 347 FKDKDVIGRGGFGKVYRGVLASNVQI----AVKKVSHDSKQGIKEFVAELVSMGRLRHRN 402
F+ IG G FG+V +L +++ A+K + +K+ L L+ N
Sbjct: 43 FERIKTIGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 403 ---LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYL 459
LVKL + +V +YMP G + L I + RF + V + YL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLR-RIGRFSEPHARFYAAQIVLT-FEYL 157
Query: 460 HEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELM 519
H +++RD+KP N+L+D K+ DFG A+ +T L GT Y+ PE++
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK----RVKGRTWXLCGTPEYLAPEII 210
Query: 520 RTGKASTSTDVYAFGVFMLEVASGRRP 546
+ + + D +A GV + E+A+G P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 92/204 (45%), Gaps = 18/204 (8%)
Query: 353 IGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGIKEFVAE-LVSMGRLRHRNLVKLRGYC 410
+GRG FG+V+R + Q AVKKV ++ F AE L++ L +V L G
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVR------LEVFRAEELMACAGLTSPRIVPLYGAV 135
Query: 411 RRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHR 470
R + + + GSL +++ + CL + + GL YLH + +LH
Sbjct: 136 REGPWVNIFMELLEGGSLGQLVKE--QGCLPEDRALYYLGQALEGLEYLHS---RRILHG 190
Query: 471 DIKPANVLLDAD-LNGKLGDFGLARLYDHDTIPQTT----KLVGTFGYMDPELMRTGKAS 525
D+K NVLL +D + L DFG A D + + + GT +M PE++
Sbjct: 191 DVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCD 250
Query: 526 TSTDVYAFGVFMLEVASGRRPVEQ 549
DV++ ML + +G P Q
Sbjct: 251 AKVDVWSSCCMMLHMLNGCHPWTQ 274
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 57/103 (55%), Gaps = 4/103 (3%)
Query: 452 VASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTF 511
+A GL +L + +++RD+K NV+LD++ + K+ DFG+ + D + T GT
Sbjct: 451 IAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV-TTKXFCGTP 506
Query: 512 GYMDPELMRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSME 554
Y+ PE++ S D +AFGV + E+ +G+ P E + E
Sbjct: 507 DYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE 549
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 99/210 (47%), Gaps = 18/210 (8%)
Query: 344 TKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRN 402
+ G+ K+ IG G + + R V A+N++ AVK V SK+ E + L+ G+ H N
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKATNMEYAVK-VIDKSKRDPSEEIEILLRYGQ--HPN 82
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSL-DKILHTNIKPCLNWYQRFRIIRGVASGLLYLHE 461
++ L+ LV + M G L DKIL + + ++ + + YLH
Sbjct: 83 IITLKDVYDDGKHVYLVTELMRGGELLDKILRQKF---FSEREASFVLHTIGKTVEYLHS 139
Query: 462 DWEQVVLHRDIKPANVLLDADLNG-----KLGDFGLARLYDHDTIPQTTKLVGTFGYMDP 516
Q V+HRD+KP+N+L D +G ++ DFG A+ + T T ++ P
Sbjct: 140 ---QGVVHRDLKPSNILY-VDESGNPECLRICDFGFAKQLRAENGLLMTPCY-TANFVAP 194
Query: 517 ELMRTGKASTSTDVYAFGVFMLEVASGRRP 546
E+++ D+++ G+ + + +G P
Sbjct: 195 EVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 57/103 (55%), Gaps = 4/103 (3%)
Query: 452 VASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTF 511
+A GL +L + +++RD+K NV+LD++ + K+ DFG+ + D + T GT
Sbjct: 130 IAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV-TTKXFCGTP 185
Query: 512 GYMDPELMRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSME 554
Y+ PE++ S D +AFGV + E+ +G+ P E + E
Sbjct: 186 DYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE 228
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 87/203 (42%), Gaps = 18/203 (8%)
Query: 353 IGRGGFGKVYRGVLASNVQ------IAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKL 406
+G+G F V R + Q I KK+S Q + E A + + L+H N+V+L
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKL-EREARICRL--LKHPNIVRL 68
Query: 407 RGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQV 466
+G LV+D + G L + + +Y + L ++
Sbjct: 69 HDSISEEGFHYLVFDLVTGGELFEDIVAR-----EYYSEADASHCIQQILESVNHCHLNG 123
Query: 467 VLHRDIKPANVLLDADLNG---KLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGK 523
++HRD+KP N+LL + G KL DFGLA D GT GY+ PE++R
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ-QAWFGFAGTPGYLSPEVLRKDP 182
Query: 524 ASTSTDVYAFGVFMLEVASGRRP 546
D++A GV + + G P
Sbjct: 183 YGKPVDMWACGVILYILLVGYPP 205
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 87/203 (42%), Gaps = 18/203 (8%)
Query: 353 IGRGGFGKVYRGVLASNVQ------IAVKKVSHDSKQGIKEFVAELVSMGRLRHRNLVKL 406
+G+G F V R + Q I KK+S Q + E A + + L+H N+V+L
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKL-EREARICRL--LKHPNIVRL 68
Query: 407 RGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQV 466
+G LV+D + G L + + +Y + L ++
Sbjct: 69 HDSISEEGFHYLVFDLVTGGELFEDIVAR-----EYYSEADASHCIQQILESVNHCHLNG 123
Query: 467 VLHRDIKPANVLLDADLNG---KLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGK 523
++HRD+KP N+LL + G KL DFGLA D GT GY+ PE++R
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ-QAWFGFAGTPGYLSPEVLRKDP 182
Query: 524 ASTSTDVYAFGVFMLEVASGRRP 546
D++A GV + + G P
Sbjct: 183 YGKPVDMWACGVILYILLVGYPP 205
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 101/212 (47%), Gaps = 17/212 (8%)
Query: 341 YKATKGFKDKDVIGRGGFGKV---YRGVLASNVQIAVKKVSH--DSKQGIKEFVAELVSM 395
+ K +++ IG G G V Y +L NV A+KK+S ++ K ELV M
Sbjct: 20 FTVLKRYQNLKPIGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELVLM 77
Query: 396 GRLRHRNLVKLRG-YCRRKG--EFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGV 452
+ H+N++ L + +K EF VY M +D L I+ L+ + ++ +
Sbjct: 78 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVM--ELMDANLCQVIQMELDHERMSYLLYQM 135
Query: 453 ASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFG 512
G+ +LH ++HRD+KP+N+++ +D K+ DFGLAR + + V T
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPE--VVTRY 190
Query: 513 YMDPELMRTGKASTSTDVYAFGVFMLEVASGR 544
Y PE++ + D+++ G M E+ +
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMVCHK 222
>pdb|2OVU|A Chain A, Crystal Strucure Of A Lectin From Canavalia Gladiata (Cgl)
In Complex With Man1-2man-Ome
Length = 237
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 65/124 (52%), Gaps = 16/124 (12%)
Query: 133 ILAIELDTVQNLDFDDIDDNHVGIDVNSLISHESAPAAYFSDREGMNKTLELIIGDPIQI 192
I+A+ELDT N D D D H+GID+ S+ S ++A ++ + G T +I
Sbjct: 4 IVAVELDTYPNTDIGDPDYPHIGIDIKSVRSKKTAK---WNMQNGKVGTAHII------- 53
Query: 193 WISYDGAEKLLNVTLAPMSIPKPTKPLLSRAINLSHILLETMYVGFSASTGSLKSSHYVL 252
Y+ K L+ A +S P +S ++L ++L E + VG SASTG K ++ +L
Sbjct: 54 ---YNSVGKRLS---AVVSYPNGDSATVSYDVDLDNVLPEWVRVGLSASTGLYKETNTIL 107
Query: 253 GWSF 256
WSF
Sbjct: 108 SWSF 111
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGVLASNVQ-IAVKKVSHDSKQGI--KEFVAELVS 394
K +++ + + +G G +G V A Q +AVKK+S + I + EL
Sbjct: 13 KTVWEVPQRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRL 72
Query: 395 MGRLRHRNLVKL------RGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRI 448
+ L+H N++ L E LV M L+ I+ + + + +F +
Sbjct: 73 LKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM-GADLNNIV--KCQALSDEHVQF-L 128
Query: 449 IRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLV 508
+ + GL Y+H ++HRD+KP+NV ++ D ++ DFGLAR D + T V
Sbjct: 129 VYQLLRGLKYIHS---AGIIHRDLKPSNVAVNEDCELRILDFGLARQADE----EMTGYV 181
Query: 509 GTFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
T Y PE+M T D+++ G M E+ G+
Sbjct: 182 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 94/212 (44%), Gaps = 27/212 (12%)
Query: 353 IGRGGFGKVYRG------VLASNVQIAVKKV----SHDSKQGIKEFVAELVSMGRLRHRN 402
+GRG FG+V A+ +AVK + +H + + + L+ +G H N
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGH--HLN 92
Query: 403 LVKLRGYCRRKG-EFLLVYDYMPNGSLDKILHTN---IKPCLNWYQRFRIIR-------G 451
+V L G C + G +++ ++ G+L L + P + Y+ F +
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQ 152
Query: 452 VASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDHDTIPQTTKLVGT 510
VA G+ +L + +HRD+ N+LL K+ DFGLAR +Y +
Sbjct: 153 VAKGMEFLAS---RKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLP 209
Query: 511 FGYMDPELMRTGKASTSTDVYAFGVFMLEVAS 542
+M PE + + +DV++FGV + E+ S
Sbjct: 210 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|1QMO|E Chain E, Structure Of Fril, A Legume Lectin That Delays
Hematopoietic Progenitor Maturation
pdb|1QMO|F Chain F, Structure Of Fril, A Legume Lectin That Delays
Hematopoietic Progenitor Maturation
pdb|1QMO|G Chain G, Structure Of Fril, A Legume Lectin That Delays
Hematopoietic Progenitor Maturation
pdb|1QMO|H Chain H, Structure Of Fril, A Legume Lectin That Delays
Hematopoietic Progenitor Maturation
Length = 133
Score = 57.0 bits (136), Expect = 3e-08, Method: Composition-based stats.
Identities = 46/130 (35%), Positives = 64/130 (49%), Gaps = 18/130 (13%)
Query: 131 NHILAIELDTVQNLDFDDIDDNHVGIDVNSLISHESAPAAYFSDREGMNKTLELIIGDPI 190
++++A+E DT N D+ D + H+GIDVNS+ S +A + + G
Sbjct: 1 SNVVAVEFDTYLNPDYGDPNYIHIGIDVNSIRSKVTAKWDWQN-------------GKIA 47
Query: 191 QIWISYDGAEKLLNVTLAPMSIPKPTKP-LLSRAINLSHILLETMYVGFSASTGSLKSSH 249
ISY+ K L+VT S +KP LS I L +L E + VG SASTG K +
Sbjct: 48 TAHISYNSVSKRLSVT----SYYAGSKPATLSYDIELHTVLPEWVRVGLSASTGQDKERN 103
Query: 250 YVLGWSFNRS 259
V WSF S
Sbjct: 104 TVHSWSFTSS 113
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 110/229 (48%), Gaps = 27/229 (11%)
Query: 347 FKDKDVIGRGGFGKVYRGVLAS-----NVQIAVKKVSH-DSKQGIKEFVAELVSMGRLRH 400
FK V+G G FG VY+G+ + +A+K++ S + KE + E M + +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHT---NI--KPCLNWYQRFRIIRGVASG 455
++ +L G C L+ MP G L + NI + LNW + +A G
Sbjct: 81 PHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 133
Query: 456 LLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLY---DHDTIPQTTKLVGTFG 512
+ YL + + ++HRD+ NVL+ + K+ DFGLA+L + + + K+ +
Sbjct: 134 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 190
Query: 513 YMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVD 560
++ L R + +DV+++GV + E+ + G +P + + E ++++
Sbjct: 191 ALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 237
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 110/229 (48%), Gaps = 27/229 (11%)
Query: 347 FKDKDVIGRGGFGKVYRGVLAS-----NVQIAVKKVSH-DSKQGIKEFVAELVSMGRLRH 400
FK V+G G FG VY+G+ + +A+K++ S + KE + E M + +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHT---NI--KPCLNWYQRFRIIRGVASG 455
++ +L G C L+ MP G L + NI + LNW + +A G
Sbjct: 78 PHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 130
Query: 456 LLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLY---DHDTIPQTTKLVGTFG 512
+ YL + + ++HRD+ NVL+ + K+ DFGLA+L + + + K+ +
Sbjct: 131 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 187
Query: 513 YMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVD 560
++ L R + +DV+++GV + E+ + G +P + + E ++++
Sbjct: 188 ALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 234
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 110/229 (48%), Gaps = 27/229 (11%)
Query: 347 FKDKDVIGRGGFGKVYRGVLAS-----NVQIAVKKVSH-DSKQGIKEFVAELVSMGRLRH 400
FK V+G G FG VY+G+ + +A+K++ S + KE + E M + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHT---NI--KPCLNWYQRFRIIRGVASG 455
++ +L G C L+ MP G L + NI + LNW + +A G
Sbjct: 77 PHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 129
Query: 456 LLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLY---DHDTIPQTTKLVGTFG 512
+ YL + + ++HRD+ NVL+ + K+ DFGLA+L + + + K+ +
Sbjct: 130 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 513 YMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVD 560
++ L R + +DV+++GV + E+ + G +P + + E ++++
Sbjct: 187 ALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 233
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 110/229 (48%), Gaps = 27/229 (11%)
Query: 347 FKDKDVIGRGGFGKVYRGVLAS-----NVQIAVKKVSH-DSKQGIKEFVAELVSMGRLRH 400
FK V+G G FG VY+G+ + +A+K++ S + KE + E M + +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHT---NI--KPCLNWYQRFRIIRGVASG 455
++ +L G C L+ MP G L + NI + LNW + +A G
Sbjct: 79 PHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 131
Query: 456 LLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLY---DHDTIPQTTKLVGTFG 512
+ YL + + ++HRD+ NVL+ + K+ DFGLA+L + + + K+ +
Sbjct: 132 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 513 YMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVD 560
++ L R + +DV+++GV + E+ + G +P + + E ++++
Sbjct: 189 ALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 235
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 110/229 (48%), Gaps = 27/229 (11%)
Query: 347 FKDKDVIGRGGFGKVYRGVLAS-----NVQIAVKKVSH-DSKQGIKEFVAELVSMGRLRH 400
FK V+G G FG VY+G+ + +A+K++ S + KE + E M + +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHT---NI--KPCLNWYQRFRIIRGVASG 455
++ +L G C L+ MP G L + NI + LNW + +A G
Sbjct: 80 PHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 132
Query: 456 LLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLY---DHDTIPQTTKLVGTFG 512
+ YL + + ++HRD+ NVL+ + K+ DFGLA+L + + + K+ +
Sbjct: 133 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 513 YMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVD 560
++ L R + +DV+++GV + E+ + G +P + + E ++++
Sbjct: 190 ALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 236
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 110/229 (48%), Gaps = 27/229 (11%)
Query: 347 FKDKDVIGRGGFGKVYRGVLAS-----NVQIAVKKVSH-DSKQGIKEFVAELVSMGRLRH 400
FK V+G G FG VY+G+ + +A+K++ S + KE + E M + +
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 86
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHT---NI--KPCLNWYQRFRIIRGVASG 455
++ +L G C L+ MP G L + NI + LNW + +A G
Sbjct: 87 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 139
Query: 456 LLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLY---DHDTIPQTTKLVGTFG 512
+ YL + + ++HRD+ NVL+ + K+ DFGLA+L + + + K+ +
Sbjct: 140 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 196
Query: 513 YMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVD 560
++ L R + +DV+++GV + E+ + G +P + + E ++++
Sbjct: 197 ALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 243
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 110/229 (48%), Gaps = 27/229 (11%)
Query: 347 FKDKDVIGRGGFGKVYRGVLAS-----NVQIAVKKVSH-DSKQGIKEFVAELVSMGRLRH 400
FK V+G G FG VY+G+ + +A+K++ S + KE + E M + +
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 82
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHT---NI--KPCLNWYQRFRIIRGVASG 455
++ +L G C L+ MP G L + NI + LNW + +A G
Sbjct: 83 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 135
Query: 456 LLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLY---DHDTIPQTTKLVGTFG 512
+ YL + + ++HRD+ NVL+ + K+ DFGLA+L + + + K+ +
Sbjct: 136 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 192
Query: 513 YMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVD 560
++ L R + +DV+++GV + E+ + G +P + + E ++++
Sbjct: 193 ALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 239
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 110/229 (48%), Gaps = 27/229 (11%)
Query: 347 FKDKDVIGRGGFGKVYRGVLAS-----NVQIAVKKVSH-DSKQGIKEFVAELVSMGRLRH 400
FK V+G G FG VY+G+ + +A+K++ S + KE + E M + +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHT---NI--KPCLNWYQRFRIIRGVASG 455
++ +L G C L+ MP G L + NI + LNW + +A G
Sbjct: 78 PHVCRLLGICL-TSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQ------IAKG 130
Query: 456 LLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLY---DHDTIPQTTKLVGTFG 512
+ YL + + ++HRD+ NVL+ + K+ DFGLA+L + + + K+ +
Sbjct: 131 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 187
Query: 513 YMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVD 560
++ L R + +DV+++GV + E+ + G +P + + E ++++
Sbjct: 188 ALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 234
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 21/217 (9%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGVLASNVQ-IAVKKVSHDSKQGI--KEFVAELVS 394
K +++ + + +G G +G V A Q +AVKK+S + I + EL
Sbjct: 21 KTVWEVPQRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRL 80
Query: 395 MGRLRHRNLVKL------RGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRI 448
+ L+H N++ L E LV M L+ I+ + + + + +F +
Sbjct: 81 LKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM-GADLNNIVKS--QALSDEHVQF-L 136
Query: 449 IRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLV 508
+ + GL Y+H ++HRD+KP+NV ++ D ++ DFGLAR D + T V
Sbjct: 137 VYQLLRGLKYIHS---AGIIHRDLKPSNVAVNEDSELRILDFGLARQADEE----MTGYV 189
Query: 509 GTFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
T Y PE+M T D+++ G M E+ G+
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 110/229 (48%), Gaps = 27/229 (11%)
Query: 347 FKDKDVIGRGGFGKVYRGVLAS-----NVQIAVKKVSH-DSKQGIKEFVAELVSMGRLRH 400
FK V+G G FG VY+G+ + +A+K++ S + KE + E M + +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHT---NI--KPCLNWYQRFRIIRGVASG 455
++ +L G C L+ MP G L + NI + LNW + +A G
Sbjct: 79 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 131
Query: 456 LLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLY---DHDTIPQTTKLVGTFG 512
+ YL + + ++HRD+ NVL+ + K+ DFGLA+L + + + K+ +
Sbjct: 132 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 513 YMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVD 560
++ L R + +DV+++GV + E+ + G +P + + E ++++
Sbjct: 189 ALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 235
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 110/229 (48%), Gaps = 27/229 (11%)
Query: 347 FKDKDVIGRGGFGKVYRGVLAS-----NVQIAVKKVSH-DSKQGIKEFVAELVSMGRLRH 400
FK V+G G FG VY+G+ + +A+K++ S + KE + E M + +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHT---NI--KPCLNWYQRFRIIRGVASG 455
++ +L G C L+ MP G L + NI + LNW + +A G
Sbjct: 80 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 132
Query: 456 LLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLY---DHDTIPQTTKLVGTFG 512
+ YL + + ++HRD+ NVL+ + K+ DFGLA+L + + + K+ +
Sbjct: 133 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 513 YMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVD 560
++ L R + +DV+++GV + E+ + G +P + + E ++++
Sbjct: 190 ALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 236
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 110/229 (48%), Gaps = 27/229 (11%)
Query: 347 FKDKDVIGRGGFGKVYRGVLAS-----NVQIAVKKVSH-DSKQGIKEFVAELVSMGRLRH 400
FK V+G G FG VY+G+ + +A+K++ S + KE + E M + +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHT---NI--KPCLNWYQRFRIIRGVASG 455
++ +L G C L+ MP G L + NI + LNW + +A G
Sbjct: 80 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 132
Query: 456 LLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLY---DHDTIPQTTKLVGTFG 512
+ YL + + ++HRD+ NVL+ + K+ DFGLA+L + + + K+ +
Sbjct: 133 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 513 YMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVD 560
++ L R + +DV+++GV + E+ + G +P + + E ++++
Sbjct: 190 ALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 236
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 110/229 (48%), Gaps = 27/229 (11%)
Query: 347 FKDKDVIGRGGFGKVYRGVLAS-----NVQIAVKKVSH-DSKQGIKEFVAELVSMGRLRH 400
FK V+G G FG VY+G+ + +A+K++ S + KE + E M + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHT---NI--KPCLNWYQRFRIIRGVASG 455
++ +L G C L+ MP G L + NI + LNW + +A G
Sbjct: 77 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 129
Query: 456 LLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLY---DHDTIPQTTKLVGTFG 512
+ YL + + ++HRD+ NVL+ + K+ DFGLA+L + + + K+ +
Sbjct: 130 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 513 YMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVD 560
++ L R + +DV+++GV + E+ + G +P + + E ++++
Sbjct: 187 ALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 233
>pdb|2YZ4|A Chain A, The Neutron Structure Of Concanavalin A At 2.2 Angstroms
Length = 237
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 65/124 (52%), Gaps = 16/124 (12%)
Query: 133 ILAIELDTVQNLDFDDIDDNHVGIDVNSLISHESAPAAYFSDREGMNKTLELIIGDPIQI 192
I+A+ELDT N D D H+GID+ S+ S ++A ++ + G T +I
Sbjct: 4 IVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAK---WNMQNGKVGTAHII------- 53
Query: 193 WISYDGAEKLLNVTLAPMSIPKPTKPLLSRAINLSHILLETMYVGFSASTGSLKSSHYVL 252
Y+ +K L+ A +S P +S ++L ++L E + VG SASTG K ++ +L
Sbjct: 54 ---YNSVDKRLS---AVVSYPNADSATVSYDVDLDNVLPEWVRVGLSASTGLYKETNTIL 107
Query: 253 GWSF 256
WSF
Sbjct: 108 SWSF 111
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 110/229 (48%), Gaps = 27/229 (11%)
Query: 347 FKDKDVIGRGGFGKVYRGVLAS-----NVQIAVKKVSH-DSKQGIKEFVAELVSMGRLRH 400
FK V+G G FG VY+G+ + +A+K++ S + KE + E M + +
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 73
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHT---NI--KPCLNWYQRFRIIRGVASG 455
++ +L G C L+ MP G L + NI + LNW + +A G
Sbjct: 74 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAEG 126
Query: 456 LLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLY---DHDTIPQTTKLVGTFG 512
+ YL + + ++HRD+ NVL+ + K+ DFGLA+L + + + K+ +
Sbjct: 127 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 183
Query: 513 YMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVD 560
++ L R + +DV+++GV + E+ + G +P + + E ++++
Sbjct: 184 ALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 230
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 110/229 (48%), Gaps = 27/229 (11%)
Query: 347 FKDKDVIGRGGFGKVYRGVLAS-----NVQIAVKKVSH-DSKQGIKEFVAELVSMGRLRH 400
FK V+G G FG VY+G+ + +A+K++ S + KE + E M + +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHT---NI--KPCLNWYQRFRIIRGVASG 455
++ +L G C L+ MP G L + NI + LNW + +A G
Sbjct: 80 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 132
Query: 456 LLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLY---DHDTIPQTTKLVGTFG 512
+ YL + + ++HRD+ NVL+ + K+ DFGLA+L + + + K+ +
Sbjct: 133 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 513 YMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVD 560
++ L R + +DV+++GV + E+ + G +P + + E ++++
Sbjct: 190 ALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 236
>pdb|2CTV|A Chain A, High Resolution Crystallographic Studies Of Native
Concanavalin A Using Rapid Laue Data Collection Methods
And The Introduction Of A Monochromatic Large-Angle
Oscillation Technique (Lot)
pdb|1CON|A Chain A, The Refined Structure Of Cadmium Substituted Concanavalin
A At 2.0 Angstroms Resolution
pdb|5CNA|A Chain A, Refined Structure Of Concanavalin A Complexed With Alpha-
Methyl-D-Mannopyranoside At 2.0 Angstroms Resolution And
Comparison With The Saccharide-Free Structure
pdb|5CNA|B Chain B, Refined Structure Of Concanavalin A Complexed With Alpha-
Methyl-D-Mannopyranoside At 2.0 Angstroms Resolution And
Comparison With The Saccharide-Free Structure
pdb|5CNA|C Chain C, Refined Structure Of Concanavalin A Complexed With Alpha-
Methyl-D-Mannopyranoside At 2.0 Angstroms Resolution And
Comparison With The Saccharide-Free Structure
pdb|5CNA|D Chain D, Refined Structure Of Concanavalin A Complexed With Alpha-
Methyl-D-Mannopyranoside At 2.0 Angstroms Resolution And
Comparison With The Saccharide-Free Structure
pdb|1APN|A Chain A, The Crystallographic Structure Of Metal-Free Concanavalin
A At 2.5 Angstroms Resolution
pdb|1APN|B Chain B, The Crystallographic Structure Of Metal-Free Concanavalin
A At 2.5 Angstroms Resolution
pdb|1CVN|A Chain A, Concanavalin A Complexed To Trimannoside
pdb|1CVN|B Chain B, Concanavalin A Complexed To Trimannoside
pdb|1CVN|C Chain C, Concanavalin A Complexed To Trimannoside
pdb|1CVN|D Chain D, Concanavalin A Complexed To Trimannoside
pdb|1ENS|A Chain A, Crystals Of Demetallized Concanavalin A Soaked With Cobalt
Having A Cobalt Ion Bound In The S1 Site
pdb|1ENS|B Chain B, Crystals Of Demetallized Concanavalin A Soaked With Cobalt
Having A Cobalt Ion Bound In The S1 Site
pdb|1ENQ|A Chain A, Co-Crystals Of Demetallized Concanavalin A With Zinc
Having A Zinc Ion Bound In The S1 Site
pdb|1ENQ|B Chain B, Co-Crystals Of Demetallized Concanavalin A With Zinc
Having A Zinc Ion Bound In The S1 Site
pdb|1ENQ|C Chain C, Co-Crystals Of Demetallized Concanavalin A With Zinc
Having A Zinc Ion Bound In The S1 Site
pdb|1ENQ|D Chain D, Co-Crystals Of Demetallized Concanavalin A With Zinc
Having A Zinc Ion Bound In The S1 Site
pdb|1CES|A Chain A, Crystals Of Demetallized Concanavalin A Soaked With Zinc
Have A Zinc Ion Bound In The S1 Site
pdb|1CES|B Chain B, Crystals Of Demetallized Concanavalin A Soaked With Zinc
Have A Zinc Ion Bound In The S1 Site
pdb|1VAL|A Chain A, Concanavalin A Complex With 4'-Nitrophenyl-Alpha-D-
Glucopyranoside
pdb|1VAL|B Chain B, Concanavalin A Complex With 4'-Nitrophenyl-Alpha-D-
Glucopyranoside
pdb|1VAL|C Chain C, Concanavalin A Complex With 4'-Nitrophenyl-Alpha-D-
Glucopyranoside
pdb|1VAL|D Chain D, Concanavalin A Complex With 4'-Nitrophenyl-Alpha-D-
Glucopyranoside
pdb|1VAM|A Chain A, Concanavalin A Complex With 4'-Nitrophenyl-Alpha-D-
Mannopyranoside
pdb|1VAM|B Chain B, Concanavalin A Complex With 4'-Nitrophenyl-Alpha-D-
Mannopyranoside
pdb|1VAM|C Chain C, Concanavalin A Complex With 4'-Nitrophenyl-Alpha-D-
Mannopyranoside
pdb|1VAM|D Chain D, Concanavalin A Complex With 4'-Nitrophenyl-Alpha-D-
Mannopyranoside
pdb|1VLN|A Chain A, A Triclinic Crystal Form Of The Lectin Concanavalin A
pdb|1VLN|B Chain B, A Triclinic Crystal Form Of The Lectin Concanavalin A
pdb|1VLN|C Chain C, A Triclinic Crystal Form Of The Lectin Concanavalin A
pdb|1VLN|D Chain D, A Triclinic Crystal Form Of The Lectin Concanavalin A
pdb|1VLN|E Chain E, A Triclinic Crystal Form Of The Lectin Concanavalin A
pdb|1VLN|F Chain F, A Triclinic Crystal Form Of The Lectin Concanavalin A
pdb|1VLN|G Chain G, A Triclinic Crystal Form Of The Lectin Concanavalin A
pdb|1VLN|H Chain H, A Triclinic Crystal Form Of The Lectin Concanavalin A
pdb|1GIC|A Chain A, Concanavalin A Complexed With Methyl
Alpha-d-glucopyranoside
pdb|1GIC|B Chain B, Concanavalin A Complexed With Methyl
Alpha-d-glucopyranoside
pdb|1TEI|A Chain A, Structure Of Concanavalin A Complexed To Beta-D-Glcnac
(1,2)alpha-D- Man-(1,6)[beta-D-Glcnac(1,2)alpha-D-Man
(1,6)]alpha-D-Man
pdb|1TEI|B Chain B, Structure Of Concanavalin A Complexed To Beta-D-Glcnac
(1,2)alpha-D- Man-(1,6)[beta-D-Glcnac(1,2)alpha-D-Man
(1,6)]alpha-D-Man
pdb|1TEI|C Chain C, Structure Of Concanavalin A Complexed To Beta-D-Glcnac
(1,2)alpha-D- Man-(1,6)[beta-D-Glcnac(1,2)alpha-D-Man
(1,6)]alpha-D-Man
pdb|1TEI|D Chain D, Structure Of Concanavalin A Complexed To Beta-D-Glcnac
(1,2)alpha-D- Man-(1,6)[beta-D-Glcnac(1,2)alpha-D-Man
(1,6)]alpha-D-Man
pdb|1TEI|E Chain E, Structure Of Concanavalin A Complexed To Beta-D-Glcnac
(1,2)alpha-D- Man-(1,6)[beta-D-Glcnac(1,2)alpha-D-Man
(1,6)]alpha-D-Man
pdb|1TEI|F Chain F, Structure Of Concanavalin A Complexed To Beta-D-Glcnac
(1,2)alpha-D- Man-(1,6)[beta-D-Glcnac(1,2)alpha-D-Man
(1,6)]alpha-D-Man
pdb|1TEI|G Chain G, Structure Of Concanavalin A Complexed To Beta-D-Glcnac
(1,2)alpha-D- Man-(1,6)[beta-D-Glcnac(1,2)alpha-D-Man
(1,6)]alpha-D-Man
pdb|1TEI|H Chain H, Structure Of Concanavalin A Complexed To Beta-D-Glcnac
(1,2)alpha-D- Man-(1,6)[beta-D-Glcnac(1,2)alpha-D-Man
(1,6)]alpha-D-Man
pdb|1ONA|A Chain A, Co-Crystals Of Concanavalin A With
Methyl-3,6-Di-O-(Alpha-D-
Mannopyranosyl)-Alpha-D-Mannopyranoside
pdb|1ONA|B Chain B, Co-Crystals Of Concanavalin A With
Methyl-3,6-Di-O-(Alpha-D-
Mannopyranosyl)-Alpha-D-Mannopyranoside
pdb|1ONA|C Chain C, Co-Crystals Of Concanavalin A With
Methyl-3,6-Di-O-(Alpha-D-
Mannopyranosyl)-Alpha-D-Mannopyranoside
pdb|1ONA|D Chain D, Co-Crystals Of Concanavalin A With
Methyl-3,6-Di-O-(Alpha-D-
Mannopyranosyl)-Alpha-D-Mannopyranoside
pdb|1CJP|A Chain A, Concanavalin A Complex With 4'-Methylumbelliferyl-Alpha-D-
Glucopyranoside
pdb|1CJP|B Chain B, Concanavalin A Complex With 4'-Methylumbelliferyl-Alpha-D-
Glucopyranoside
pdb|1CJP|C Chain C, Concanavalin A Complex With 4'-Methylumbelliferyl-Alpha-D-
Glucopyranoside
pdb|1CJP|D Chain D, Concanavalin A Complex With 4'-Methylumbelliferyl-Alpha-D-
Glucopyranoside
pdb|1BXH|A Chain A, Concanavalin A Complexed To Methyl Alpha1-2 Mannobioside
pdb|1BXH|B Chain B, Concanavalin A Complexed To Methyl Alpha1-2 Mannobioside
pdb|1BXH|C Chain C, Concanavalin A Complexed To Methyl Alpha1-2 Mannobioside
pdb|1BXH|D Chain D, Concanavalin A Complexed To Methyl Alpha1-2 Mannobioside
pdb|1QGL|A Chain A, Room Temperature Structure Of Concanavalin A Complexed To
Bivalent Ligand
pdb|1QGL|B Chain B, Room Temperature Structure Of Concanavalin A Complexed To
Bivalent Ligand
pdb|1QDC|A Chain A, Man(aplha1-6)man(alpha1-o)methyl Concanavalin A Complex
pdb|1QDC|B Chain B, Man(aplha1-6)man(alpha1-o)methyl Concanavalin A Complex
pdb|1QDC|C Chain C, Man(aplha1-6)man(alpha1-o)methyl Concanavalin A Complex
pdb|1QDC|D Chain D, Man(aplha1-6)man(alpha1-o)methyl Concanavalin A Complex
pdb|1QDO|A Chain A, Man(aplha1-3)man(alpha1-o)methyl Concanavalin A Complex
pdb|1QDO|B Chain B, Man(aplha1-3)man(alpha1-o)methyl Concanavalin A Complex
pdb|1QDO|C Chain C, Man(aplha1-3)man(alpha1-o)methyl Concanavalin A Complex
pdb|1QDO|D Chain D, Man(aplha1-3)man(alpha1-o)methyl Concanavalin A Complex
pdb|1DQ0|A Chain A, Locked, Metal-Free Concanavalin A, A Minor Species In
Solution
pdb|1DQ1|A Chain A, Calcium;calcium Concanavalin A
pdb|1DQ2|A Chain A, Unlocked Metal-Free Concanavalin A
pdb|1DQ2|B Chain B, Unlocked Metal-Free Concanavalin A
pdb|1DQ4|A Chain A, A Transient Unlocked Concanavalin A Structure With Mn2+
Bound In The Transition Metal Ion Binding Site S1 And An
Empty Calcium Binding Site S2
pdb|1DQ4|B Chain B, A Transient Unlocked Concanavalin A Structure With Mn2+
Bound In The Transition Metal Ion Binding Site S1 And An
Empty Calcium Binding Site S2
pdb|1DQ5|A Chain A, Manganese;manganese Concanavalin A At Ph 5.0
pdb|1DQ6|A Chain A, Manganese;manganese Concanavalin A At Ph 7.0
pdb|1QNY|A Chain A, X-Ray Refinement Of D2o Soaked Crystal Of Concanavalin A
pdb|1C57|A Chain A, Direct Determination Of The Positions Of Deuterium Atoms
Of Bound Water In Concanavalin A By Neutron Laue
Crystallography
pdb|3ENR|A Chain A, Zinc-Calcium Concanavalin A At Ph 6.15
pdb|3ENR|B Chain B, Zinc-Calcium Concanavalin A At Ph 6.15
pdb|1I3H|A Chain A, Concanavalin A-Dimannose Structure
pdb|1GKB|A Chain A, Concanavalin A, New Crystal Form
pdb|1GKB|B Chain B, Concanavalin A, New Crystal Form
pdb|1JW6|A Chain A, Crystal Structure Of The Complex Of Concanavalin A And
Hexapeptide
pdb|1JOJ|A Chain A, Concanavalin A-Hexapeptide Complex
pdb|1JOJ|B Chain B, Concanavalin A-Hexapeptide Complex
pdb|1JOJ|C Chain C, Concanavalin A-Hexapeptide Complex
pdb|1JOJ|D Chain D, Concanavalin A-Hexapeptide Complex
pdb|1JUI|A Chain A, Concanavalin A-Carbohydrate Mimicking 10-Mer Peptide
Complex
pdb|1JUI|B Chain B, Concanavalin A-Carbohydrate Mimicking 10-Mer Peptide
Complex
pdb|1JUI|C Chain C, Concanavalin A-Carbohydrate Mimicking 10-Mer Peptide
Complex
pdb|1JUI|D Chain D, Concanavalin A-Carbohydrate Mimicking 10-Mer Peptide
Complex
pdb|1JYC|A Chain A, Concanavalin A15-Mer Peptide Complex
pdb|1JYC|B Chain B, Concanavalin A15-Mer Peptide Complex
pdb|1JYC|C Chain C, Concanavalin A15-Mer Peptide Complex
pdb|1JYC|D Chain D, Concanavalin A15-Mer Peptide Complex
pdb|1JYI|A Chain A, Concanavalin A/12-mer Peptide Complex
pdb|1JYI|B Chain B, Concanavalin A/12-mer Peptide Complex
pdb|1JYI|C Chain C, Concanavalin A/12-mer Peptide Complex
pdb|1JYI|D Chain D, Concanavalin A/12-mer Peptide Complex
pdb|1JN2|P Chain P, Crystal Structure Of Meso-Tetrasulphonatophenyl Porphyrin
Complexed With Concanavalin A
pdb|1HQW|A Chain A, Crystal Structure Of The Complex Of Concanavalin A With A
Tripeptide Ypy
pdb|1NXD|1 Chain 1, Crystal Structure Of Mnmn Concanavalin A
pdb|1NXD|2 Chain 2, Crystal Structure Of Mnmn Concanavalin A
pdb|1NXD|3 Chain 3, Crystal Structure Of Mnmn Concanavalin A
pdb|1NXD|4 Chain 4, Crystal Structure Of Mnmn Concanavalin A
pdb|1XQN|A Chain A, The 15k Neutron Structure Of Saccharide-Free Concanavalin
A
pdb|2A7A|A Chain A, On The Routine Use Of Soft X-Rays In Macromolecular
Crystallography, Part Iii- The Optimal Data Collection
Wavelength
pdb|2G4I|A Chain A, Anomalous Substructure Of Concanavalin A
pdb|1ENR|A Chain A, Co-Crystals Of Demetallized Concanavalin A With Zinc And
Calcium Having A Zinc Ion Bound In The S1 Site And A
Calcium Ion Bound In The S2 Site
pdb|1JBC|A Chain A, Concanavalin A
pdb|1NLS|A Chain A, Concanavalin A And Its Bound Solvent At 0.94a Resolution
pdb|1SCR|A Chain A, High-Resolution Structures Of Single-Metal-Substituted
Concanavalin A: The Co,Ca-Protein At 1.6 Angstroms And
The Ni,Ca-Protein At 2.0 Angstroms
pdb|1SCS|A Chain A, High-Resolution Structures Of Single-Metal-Substituted
Concanavalin A: The Co,Ca-Protein At 1.6 Angstroms And
The Ni,Ca-Protein At 2.0 Angstroms
pdb|2ENR|A Chain A, Co-crystals Of Demetallized Concanavalin A With Cadmium
Having A Cadmium Ion Bound In Both The S1 Site And The
S2 Site
pdb|2UU8|A Chain A, X-Ray Structure Of Ni, Ca Concanavalin A At Ultra-High
Resolution (0.94a)
pdb|3D4K|A Chain A, Concanavalin A Complexed To A Synthetic Analog Of The
Trimannoside
pdb|3D4K|B Chain B, Concanavalin A Complexed To A Synthetic Analog Of The
Trimannoside
pdb|3D4K|C Chain C, Concanavalin A Complexed To A Synthetic Analog Of The
Trimannoside
pdb|3D4K|D Chain D, Concanavalin A Complexed To A Synthetic Analog Of The
Trimannoside
pdb|3NWK|A Chain A, A Second C2221 Form Of Concanavalin A (Canavalia
Ensiformis)
pdb|3NWK|B Chain B, A Second C2221 Form Of Concanavalin A (Canavalia
Ensiformis)
pdb|3NWK|C Chain C, A Second C2221 Form Of Concanavalin A (Canavalia
Ensiformis)
pdb|3NWK|D Chain D, A Second C2221 Form Of Concanavalin A (Canavalia
Ensiformis)
pdb|3QLQ|A Chain A, Crystal Structure Of Concanavalin A Bound To An
Octa-Alpha-Mannosyl- Octasilsesquioxane Cluster
pdb|3QLQ|B Chain B, Crystal Structure Of Concanavalin A Bound To An
Octa-Alpha-Mannosyl- Octasilsesquioxane Cluster
pdb|3QLQ|C Chain C, Crystal Structure Of Concanavalin A Bound To An
Octa-Alpha-Mannosyl- Octasilsesquioxane Cluster
pdb|3QLQ|D Chain D, Crystal Structure Of Concanavalin A Bound To An
Octa-Alpha-Mannosyl- Octasilsesquioxane Cluster
Length = 237
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 65/124 (52%), Gaps = 16/124 (12%)
Query: 133 ILAIELDTVQNLDFDDIDDNHVGIDVNSLISHESAPAAYFSDREGMNKTLELIIGDPIQI 192
I+A+ELDT N D D H+GID+ S+ S ++A ++ + G T +I
Sbjct: 4 IVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAK---WNMQNGKVGTAHII------- 53
Query: 193 WISYDGAEKLLNVTLAPMSIPKPTKPLLSRAINLSHILLETMYVGFSASTGSLKSSHYVL 252
Y+ +K L+ A +S P +S ++L ++L E + VG SASTG K ++ +L
Sbjct: 54 ---YNSVDKRLS---AVVSYPNADSATVSYDVDLDNVLPEWVRVGLSASTGLYKETNTIL 107
Query: 253 GWSF 256
WSF
Sbjct: 108 SWSF 111
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 110/229 (48%), Gaps = 27/229 (11%)
Query: 347 FKDKDVIGRGGFGKVYRGVLAS-----NVQIAVKKVSH-DSKQGIKEFVAELVSMGRLRH 400
FK V+G G FG VY+G+ + +A+K++ S + KE + E M + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHT---NI--KPCLNWYQRFRIIRGVASG 455
++ +L G C L+ MP G L + NI + LNW + +A G
Sbjct: 77 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 129
Query: 456 LLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLY---DHDTIPQTTKLVGTFG 512
+ YL + + ++HRD+ NVL+ + K+ DFGLA+L + + + K+ +
Sbjct: 130 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 513 YMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVD 560
++ L R + +DV+++GV + E+ + G +P + + E ++++
Sbjct: 187 ALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 233
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 110/229 (48%), Gaps = 27/229 (11%)
Query: 347 FKDKDVIGRGGFGKVYRGVLAS-----NVQIAVKKVSH-DSKQGIKEFVAELVSMGRLRH 400
FK V+G G FG VY+G+ + +A+K++ S + KE + E M + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHT---NI--KPCLNWYQRFRIIRGVASG 455
++ +L G C L+ MP G L + NI + LNW + +A G
Sbjct: 77 PHVCRLLGICL-TSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQ------IAKG 129
Query: 456 LLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLY---DHDTIPQTTKLVGTFG 512
+ YL + + ++HRD+ NVL+ + K+ DFGLA+L + + + K+ +
Sbjct: 130 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 513 YMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVD 560
++ L R + +DV+++GV + E+ + G +P + + E ++++
Sbjct: 187 ALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 233
>pdb|3U4X|A Chain A, Crystal Structure Of A Lectin From Camptosema Pedicellatum
Seeds In Complex With
5-Bromo-4-Chloro-3-Indolyl-Alpha-D-Mannose
Length = 236
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 65/124 (52%), Gaps = 16/124 (12%)
Query: 133 ILAIELDTVQNLDFDDIDDNHVGIDVNSLISHESAPAAYFSDREGMNKTLELIIGDPIQI 192
I+A+ELDT N D D + H+GI++ S+ S ++ ++G T
Sbjct: 4 IVAVELDTYPNTDIGDPNYQHIGINIKSI---RSKATTRWNVQDGKVGTAH--------- 51
Query: 193 WISYDGAEKLLNVTLAPMSIPKPTKPLLSRAINLSHILLETMYVGFSASTGSLKSSHYVL 252
ISY+ K L+ A +S P + +S ++L++IL E + VG SASTG K ++ +L
Sbjct: 52 -ISYNSVAKRLS---AIVSYPGGSSATVSYDVDLNNILPEWVRVGLSASTGVYKETNTIL 107
Query: 253 GWSF 256
WSF
Sbjct: 108 SWSF 111
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 110/229 (48%), Gaps = 27/229 (11%)
Query: 347 FKDKDVIGRGGFGKVYRGVLAS-----NVQIAVKKVSH-DSKQGIKEFVAELVSMGRLRH 400
FK V+G G FG VY+G+ + +A+K++ S + KE + E M + +
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHT---NI--KPCLNWYQRFRIIRGVASG 455
++ +L G C L+ MP G L + NI + LNW + +A G
Sbjct: 71 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 123
Query: 456 LLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLY---DHDTIPQTTKLVGTFG 512
+ YL + + ++HRD+ NVL+ + K+ DFGLA+L + + + K+ +
Sbjct: 124 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 180
Query: 513 YMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVD 560
++ L R + +DV+++GV + E+ + G +P + + E ++++
Sbjct: 181 ALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 227
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 101/212 (47%), Gaps = 17/212 (8%)
Query: 341 YKATKGFKDKDVIGRGGFGKV---YRGVLASNVQIAVKKVSH--DSKQGIKEFVAELVSM 395
+ K +++ IG G G V Y +L NV A+KK+S ++ K ELV M
Sbjct: 20 FTVLKRYQNLKPIGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELVLM 77
Query: 396 GRLRHRNLVKLRG-YCRRKG--EFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGV 452
+ H+N++ L + +K EF VY M +D L I+ L+ + ++ +
Sbjct: 78 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVM--ELMDANLCQVIQMELDHERMSYLLYQM 135
Query: 453 ASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFG 512
G+ +LH ++HRD+KP+N+++ +D K+ DFGLAR + + V T
Sbjct: 136 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPE--VVTRY 190
Query: 513 YMDPELMRTGKASTSTDVYAFGVFMLEVASGR 544
Y PE++ + D+++ G M E+ +
Sbjct: 191 YRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 222
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 110/229 (48%), Gaps = 27/229 (11%)
Query: 347 FKDKDVIGRGGFGKVYRGVLAS-----NVQIAVKKVSH-DSKQGIKEFVAELVSMGRLRH 400
FK V+G G FG VY+G+ + +A+K++ S + KE + E M + +
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 101
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHT---NI--KPCLNWYQRFRIIRGVASG 455
++ +L G C L+ MP G L + NI + LNW + +A G
Sbjct: 102 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 154
Query: 456 LLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLY---DHDTIPQTTKLVGTFG 512
+ YL + + ++HRD+ NVL+ + K+ DFGLA+L + + + K+ +
Sbjct: 155 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 211
Query: 513 YMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVD 560
++ L R + +DV+++GV + E+ + G +P + + E ++++
Sbjct: 212 ALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 258
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 110/229 (48%), Gaps = 27/229 (11%)
Query: 347 FKDKDVIGRGGFGKVYRGVLAS-----NVQIAVKKVSH-DSKQGIKEFVAELVSMGRLRH 400
FK V+G G FG VY+G+ + +A+K++ S + KE + E M + +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHT---NI--KPCLNWYQRFRIIRGVASG 455
++ +L G C L+ MP G L + NI + LNW + +A G
Sbjct: 84 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 136
Query: 456 LLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLY---DHDTIPQTTKLVGTFG 512
+ YL + + ++HRD+ NVL+ + K+ DFGLA+L + + + K+ +
Sbjct: 137 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 513 YMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVD 560
++ L R + +DV+++GV + E+ + G +P + + E ++++
Sbjct: 194 ALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 240
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 111/277 (40%), Gaps = 56/277 (20%)
Query: 335 FTYKDLYKATKGFKDKDVIGRGGFGKVYRGVLASNVQIAVKKVSHDSK------QGIKEF 388
F L + K + K IG+G +G V + I K+ + +K + ++
Sbjct: 16 FQGGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERI 75
Query: 389 VAELVSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSL-DK---------------IL 432
E+ M +L H N+ +L + LV + G L DK ++
Sbjct: 76 KTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVV 135
Query: 433 HTNIKPC------------------LNWYQRFRII----RGVASGLLYLHEDWEQVVLHR 470
T I PC L++ QR ++I R + S L YLH Q + HR
Sbjct: 136 KTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHN---QGICHR 192
Query: 471 DIKPANVLLDAD--LNGKLGDFGLA----RLYDHDTIPQTTKLVGTFGYMDPELMRTGKA 524
DIKP N L + KL DFGL+ +L + + TTK GT ++ PE++ T
Sbjct: 193 DIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTK-AGTPYFVAPEVLNTTNE 251
Query: 525 S--TSTDVYAFGVFMLEVASGRRPVEQQGSMETVNLV 559
S D ++ GV + + G P +T++ V
Sbjct: 252 SYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQV 288
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 345 KGFKDKDVIGRGGFGKVYRGVLASNVQIAVKKVSHDSKQGIKEFVAELVSMGRL----RH 400
+ F+ +G G +G+V++ + ++ K S +G K+ +L +G +H
Sbjct: 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQH 116
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNW------YQRFRIIRGVAS 454
V+L +G L + + SL + C W Q + +R
Sbjct: 117 PCCVRLE-QAWEEGGILYLQTELCGPSLQQH-------CEAWGASLPEAQVWGYLRDTLL 168
Query: 455 GLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYM 514
L +LH Q ++H D+KPAN+ L KLGDFGL L + T G YM
Sbjct: 169 ALAHLHS---QGLVHLDVKPANIFLGPRGRCKLGDFGL--LVELGTAGAGEVQEGDPRYM 223
Query: 515 DPELMRTGKASTSTDVYAFGVFMLEVA 541
PEL++ G T+ DV++ G+ +LEVA
Sbjct: 224 APELLQ-GSYGTAADVFSLGLTILEVA 249
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 19/207 (9%)
Query: 347 FKDKDVIGRGGFGKVYRGVLASNVQI----AVKKVSHDSKQGIKEFVAELVSMGRLRHRN 402
F+ IG G FG+V +L +++ A+K + +K+ L L+ N
Sbjct: 43 FERIKTIGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 403 ---LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYL 459
LVKL + +V +Y+P G + L I + RF + V + YL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAAQIVLT-FEYL 157
Query: 460 HEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELM 519
H +++RD+KP N+L+D K+ DFG A+ +T L GT Y+ PE++
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK----RVKGRTWXLCGTPEYLAPEII 210
Query: 520 RTGKASTSTDVYAFGVFMLEVASGRRP 546
+ + + D +A GV + E+A+G P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2D3P|A Chain A, Cratylia Floribunda Seed Lectin Crystallized At Basic Ph
pdb|2D3P|B Chain B, Cratylia Floribunda Seed Lectin Crystallized At Basic Ph
pdb|2D3P|C Chain C, Cratylia Floribunda Seed Lectin Crystallized At Basic Ph
pdb|2D3P|D Chain D, Cratylia Floribunda Seed Lectin Crystallized At Basic Ph
pdb|2D3R|A Chain A, Cratylia Folibunda Seed Lectin At Acidic Ph
pdb|2D3R|B Chain B, Cratylia Folibunda Seed Lectin At Acidic Ph
pdb|2D3R|C Chain C, Cratylia Folibunda Seed Lectin At Acidic Ph
pdb|2D3R|D Chain D, Cratylia Folibunda Seed Lectin At Acidic Ph
Length = 236
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 65/124 (52%), Gaps = 16/124 (12%)
Query: 133 ILAIELDTVQNLDFDDIDDNHVGIDVNSLISHESAPAAYFSDREGMNKTLELIIGDPIQI 192
I+A+ELDT N D D + H+GI++ S+ S ++ ++G T
Sbjct: 4 IVAVELDTYPNTDIGDPNYQHIGINIKSI---RSKATTRWNVQDGKVGTAH--------- 51
Query: 193 WISYDGAEKLLNVTLAPMSIPKPTKPLLSRAINLSHILLETMYVGFSASTGSLKSSHYVL 252
ISY+ K L+ A +S P + +S ++L++IL E + VG SASTG K ++ +L
Sbjct: 52 -ISYNSVAKRLS---AIVSYPGGSSATVSYDVDLNNILPEWVRVGLSASTGLYKETNTIL 107
Query: 253 GWSF 256
WSF
Sbjct: 108 SWSF 111
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 100/211 (47%), Gaps = 20/211 (9%)
Query: 344 TKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRN 402
T G++ K+ IG G + R + A+N++ AVK + SK+ E + L+ G+ H N
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIID-KSKRDPTEEIEILLRYGQ--HPN 77
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSL-DKILHTNIKPCLNWYQRFRIIRGVASGLLYLHE 461
++ L+ +V + M G L DKIL + + ++ + + YLH
Sbjct: 78 IITLKDVYDDGKYVYVVTELMKGGELLDKILRQKF---FSEREASAVLFTITKTVEYLHA 134
Query: 462 DWEQVVLHRDIKPANVLLDADLNG-----KLGDFGLAR-LYDHDTIPQTTKLVGTFGYMD 515
Q V+HRD+KP+N+L D +G ++ DFG A+ L + + T F +
Sbjct: 135 ---QGVVHRDLKPSNILY-VDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANF--VA 188
Query: 516 PELMRTGKASTSTDVYAFGVFMLEVASGRRP 546
PE++ + D+++ GV + + +G P
Sbjct: 189 PEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 338 KDLYKATKGFKDKDVIGRGGFGKVYRGVLASNVQ-IAVKKVSHDSKQGI--KEFVAELVS 394
K +++ + + +G G +G V A Q +AVKK+S + I + EL
Sbjct: 21 KTVWEVPQRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRL 80
Query: 395 MGRLRHRNLVKL------RGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRI 448
+ L+H N++ L E LV M L+ I+ + + + +F +
Sbjct: 81 LKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM-GADLNNIV--KCQALSDEHVQF-L 136
Query: 449 IRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLV 508
+ + GL Y+H ++HRD+KP+NV ++ D ++ DFGLAR D + T V
Sbjct: 137 VYQLLRGLKYIHS---AGIIHRDLKPSNVAVNEDSELRILDFGLARQADEE----MTGYV 189
Query: 509 GTFGYMDPELMRTGKASTST-DVYAFGVFMLEVASGR 544
T Y PE+M T D+++ G M E+ G+
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 97/209 (46%), Gaps = 23/209 (11%)
Query: 347 FKDKDVIGRGGFGKVYRGVLA-SNVQIAVKKV--SHDSKQGIKEFVAELVSMGRLRHRNL 403
++D +G G +G V V + ++A+KK+ S+ K EL + +RH N+
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 86
Query: 404 VKLRGYCRRK------GEFLLVYDYMPNGSLDKIL-HTNIKPCLNWYQRFRIIRGVASGL 456
+ L +F LV +M L K++ H + + +++++G L
Sbjct: 87 IGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKHEKLGEDRIQFLVYQMLKG----L 141
Query: 457 LYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDP 516
Y+H ++HRD+KP N+ ++ D K+ DFGLAR D + V T Y P
Sbjct: 142 RYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLARQADS----EMXGXVVTRWYRAP 194
Query: 517 ELMRTGKASTST-DVYAFGVFMLEVASGR 544
E++ T T D+++ G M E+ +G+
Sbjct: 195 EVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|1CN1|A Chain A, Crystal Structure Of Demetallized Concanavalin A. The
Metal- Binding Region
pdb|1CN1|B Chain B, Crystal Structure Of Demetallized Concanavalin A. The
Metal- Binding Region
pdb|3CNA|A Chain A, Structure Of Concanavalin A At 2.4 Angstroms Resolution
Length = 237
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 66/124 (53%), Gaps = 16/124 (12%)
Query: 133 ILAIELDTVQNLDFDDIDDNHVGIDVNSLISHESAPAAYFSDREGMNKTLELIIGDPIQI 192
I+A+ELDT N D D H+GID+ S+ S ++A ++ ++G T +I
Sbjct: 4 IVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAK---WNMQDGKVGTAHII------- 53
Query: 193 WISYDGAEKLLNVTLAPMSIPKPTKPLLSRAINLSHILLETMYVGFSASTGSLKSSHYVL 252
Y+ +K L+ A +S P +S ++L+ +L E + VG SASTG K ++ +L
Sbjct: 54 ---YNSVDKRLS---AVVSYPNADATSVSYDVDLNDVLPEWVRVGLSASTGLYKETNTIL 107
Query: 253 GWSF 256
WSF
Sbjct: 108 SWSF 111
>pdb|2CNA|A Chain A, The Covalent And Three-Dimensional Structure Of
Concanavalin A, Iv.Atomic Coordinates,Hydrogen
Bonding,And Quaternary Structure
Length = 237
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 66/124 (53%), Gaps = 16/124 (12%)
Query: 133 ILAIELDTVQNLDFDDIDDNHVGIDVNSLISHESAPAAYFSDREGMNKTLELIIGDPIQI 192
I+A+ELDT N D D H+GID+ S+ S ++A ++ ++G T +I
Sbjct: 4 IVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAK---WNMQDGKVGTAHII------- 53
Query: 193 WISYDGAEKLLNVTLAPMSIPKPTKPLLSRAINLSHILLETMYVGFSASTGSLKSSHYVL 252
Y+ +K L+ A +S P +S ++L+ +L E + VG SASTG K ++ +L
Sbjct: 54 ---YNSVDKRLS---AVVSYPNADATSVSYDVDLNDVLPEWVRVGLSASTGLYKETNTIL 107
Query: 253 GWSF 256
WSF
Sbjct: 108 SWSF 111
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 120/289 (41%), Gaps = 48/289 (16%)
Query: 353 IGRGGFGKVYRG------VLASNVQIAVKKV----SHDSKQGIKEFVAELVSMGRLRHRN 402
+GRG FG+V A+ +AVK + +H + + + L+ +G H N
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH--HLN 93
Query: 403 LVKLRGYCRRKG-EFLLVYDYMPNGSLDKILHTN------IKPCLNWYQRFRIIR----- 450
+V L G C + G +++ ++ G+L L + K + Y+ F +
Sbjct: 94 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICY 153
Query: 451 --GVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR--LYDHDTIPQTTK 506
VA G+ +L + +HRD+ N+LL K+ DFGLAR D D + +
Sbjct: 154 SFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 507 LVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCDC 565
+ +M PE + + +DV++FGV + E+ S G P V + + C
Sbjct: 211 RL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY------PGVKIDEEFCRR 263
Query: 566 WKKGAIRDASDSRLEGICEEKQMELVLKLGLFCSHPKPEARPNMRQVMQ 614
K+G A D + + L C H +P RP ++++
Sbjct: 264 LKEGTRMRAPDYTTPEM---------YQTMLDCWHGEPSQRPTFSELVE 303
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 100/222 (45%), Gaps = 38/222 (17%)
Query: 350 KDVIGRGGFGKVYRGVLASNVQ-IAVKKVSHDSKQGI--KEFVAELVSMGRLRHRNLVKL 406
K +IGRG +G VY + + +A+KKV+ + I K + E+ + RL+ +++L
Sbjct: 31 KHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRL 90
Query: 407 RGYCRRKGEFLLVYDYM------PNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLH 460
Y + LL +D + + L K+ T I L I+ + G ++H
Sbjct: 91 --YDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPI--FLTEEHIKTILYNLLLGENFIH 146
Query: 461 EDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARL---------------------YDHD 499
E ++HRD+KPAN LL+ D + K+ DFGLAR ++ +
Sbjct: 147 ESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKN 203
Query: 500 TIPQTTKLVGTFGYMDPELMRTGKAST-STDVYAFGVFMLEV 540
Q T V T Y PEL+ + T S D+++ G E+
Sbjct: 204 LKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAEL 245
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 121/289 (41%), Gaps = 49/289 (16%)
Query: 353 IGRGGFGKVYRG------VLASNVQIAVKKV----SHDSKQGIKEFVAELVSMGRLRHRN 402
+GRG FG+V A+ +AVK + +H + + + L+ +G H N
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGH--HLN 94
Query: 403 LVKLRGYCRRKG-EFLLVYDYMPNGSLDKILHTN------IKPCLNWYQRFRIIR----- 450
+V L G C + G +++ ++ G+L L + KP + Y+ F +
Sbjct: 95 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKP-EDLYKDFLTLEHLIXY 153
Query: 451 --GVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR--LYDHDTIPQTTK 506
VA G+ +L + +HRD+ N+LL K+ DFGLAR D D + +
Sbjct: 154 SFQVAKGMEFLAS---RKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 507 LVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCDC 565
+ +M PE + + +DV++FGV + E+ S G P V + + C
Sbjct: 211 RL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY------PGVKIDEEFCRR 263
Query: 566 WKKGAIRDASDSRLEGICEEKQMELVLKLGLFCSHPKPEARPNMRQVMQ 614
K+G A D + + L C H +P RP ++++
Sbjct: 264 LKEGTRMRAPDYTTPEMYQTM---------LDCWHGEPSQRPTFSELVE 303
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 19/207 (9%)
Query: 347 FKDKDVIGRGGFGKVYRGVLASNVQI----AVKKVSHDSKQGIKEFVAELVSMGRLRHRN 402
F+ +G G FG+V +L +++ A+K + +KE L L+ N
Sbjct: 43 FERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN 99
Query: 403 ---LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYL 459
LVKL + +V +Y P G + L I + RF + V + YL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR-RIGRFSEPHARFYAAQIVLT-FEYL 157
Query: 460 HEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELM 519
H +++RD+KP N+++D K+ DFGLA+ +T L GT Y+ PE++
Sbjct: 158 HS---LDLIYRDLKPENLMIDQQGYIKVTDFGLAK----RVKGRTWXLCGTPEYLAPEII 210
Query: 520 RTGKASTSTDVYAFGVFMLEVASGRRP 546
+ + + D +A GV + E+A+G P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 104/226 (46%), Gaps = 26/226 (11%)
Query: 337 YKDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGIKEFVAELVSM 395
++D+Y+ +DV+G G +V + L ++ + AVK + E+ +
Sbjct: 10 FEDVYQL-----QEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEML 64
Query: 396 GRLR-HRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVAS 454
+ + HRN+++L + + F LV++ M GS+ + H + + N + +++ VAS
Sbjct: 65 YQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSI--LSHIHKRRHFNELEASVVVQDVAS 122
Query: 455 GLLYLHEDWEQVVLHRDIKPANVLLDADLN---GKLGDFGLARLYDHD------TIPQTT 505
L +LH + + HRD+KP N+L + K+ DFGL + + P+
Sbjct: 123 ALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELL 179
Query: 506 KLVGTFGYMDPELMRTGKASTS-----TDVYAFGVFMLEVASGRRP 546
G+ YM PE++ S D+++ GV + + SG P
Sbjct: 180 TPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|1IOA|A Chain A, Arcelin-5, A Lectin-Like Defense Protein From Phaseolus
Vulgaris
pdb|1IOA|B Chain B, Arcelin-5, A Lectin-Like Defense Protein From Phaseolus
Vulgaris
Length = 240
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 104/245 (42%), Gaps = 45/245 (18%)
Query: 30 FIYHGFNEDAQLQRDGLASVHSNGLLQLTNTVS---PQQE--GHAFYRLPIK-------- 76
F + F+ D +L G A++ S G LQLT S P+ + G AFY PI+
Sbjct: 6 FNFPNFHTDDKLILQGNATISSKGQLQLTGVGSNELPRVDSLGRAFYSDPIQIKDSNNVA 65
Query: 77 -FNTXXXXXXXXXXNFVFAIGMAFVISPSKDLGKAEASPSEYLGLFNASNNGQSTNHILA 135
FNT + A G+AF + P + E+LG+FN +NN + +A
Sbjct: 66 SFNTNFTFIIRAKNQSISAYGLAFALVP---VNSPPQKKQEFLGIFN-TNNPEPNARTVA 121
Query: 136 IELDTVQN-LDFDDIDDNHVGIDVNSLISHESAPAAYFSDREGMNKTLELIIGDPIQIWI 194
+ +T +N +DF D N + VN N G+ + I
Sbjct: 122 VVFNTFKNRIDF---DKNFIKPYVNE------------------NCDFHKYNGEKTDVQI 160
Query: 195 SYDGAEKLLNVTLAPMSIPKPTKPLLSRAINLSHILLETMYVGFSASTG---SLKSSHYV 251
+YD + L V L ++ + K +S ++L + E + VGFS ++G +H V
Sbjct: 161 TYDSSNNDLRVFLH-FTVSQ-VKCSVSATVHLEKEVDEWVSVGFSPTSGLTEDTTETHDV 218
Query: 252 LGWSF 256
L WSF
Sbjct: 219 LSWSF 223
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 94/184 (51%), Gaps = 26/184 (14%)
Query: 390 AELVSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSL-DKIL-HTNIKPC---LNWYQ 444
E+ + +L H ++K++ + + ++ +V + M G L DK++ + +K L +YQ
Sbjct: 63 TEIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 121
Query: 445 RFRIIRGVASGLLYLHEDWEQVVLHRDIKPANVLL---DADLNGKLGDFGLARLYDHDTI 501
++ YLHE+ ++HRD+KP NVLL + D K+ DFG +++ ++
Sbjct: 122 MLLAVQ-------YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 171
Query: 502 PQTTKLVGTFGYMDPE-LMRTGKA--STSTDVYAFGVFMLEVASGRRPVEQQGSMETVNL 558
+T L GT Y+ PE L+ G A + + D ++ GV + SG P + + V+L
Sbjct: 172 MRT--LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ--VSL 227
Query: 559 VDWV 562
D +
Sbjct: 228 KDQI 231
>pdb|1WUV|A Chain A, Crystal Structure Of Native Canavalia Gladiata Lectin
(Cgl): A Tetrameric Cona-Like Lectin
pdb|1WUV|D Chain D, Crystal Structure Of Native Canavalia Gladiata Lectin
(Cgl): A Tetrameric Cona-Like Lectin
pdb|1WUV|G Chain G, Crystal Structure Of Native Canavalia Gladiata Lectin
(Cgl): A Tetrameric Cona-Like Lectin
pdb|1WUV|J Chain J, Crystal Structure Of Native Canavalia Gladiata Lectin
(Cgl): A Tetrameric Cona-Like Lectin
pdb|2D7F|A Chain A, Crystal Structure Of A Lectin From Canavalia Gladiata
Seeds Complexed With Alpha-Methyl-Mannoside And Alpha-
Aminobutyric Acid
pdb|2D7F|F Chain F, Crystal Structure Of A Lectin From Canavalia Gladiata
Seeds Complexed With Alpha-Methyl-Mannoside And Alpha-
Aminobutyric Acid
pdb|2D7F|L Chain L, Crystal Structure Of A Lectin From Canavalia Gladiata
Seeds Complexed With Alpha-Methyl-Mannoside And Alpha-
Aminobutyric Acid
pdb|2D7F|S Chain S, Crystal Structure Of A Lectin From Canavalia Gladiata
Seeds Complexed With Alpha-Methyl-Mannoside And Alpha-
Aminobutyric Acid
pdb|2EF6|A Chain A, Canavalia Gladiata Lectin Complexed With Man1-3man-Ome
pdb|2EF6|B Chain B, Canavalia Gladiata Lectin Complexed With Man1-3man-Ome
pdb|2EF6|C Chain C, Canavalia Gladiata Lectin Complexed With Man1-3man-Ome
pdb|2EF6|D Chain D, Canavalia Gladiata Lectin Complexed With Man1-3man-Ome
pdb|2P2K|A Chain A, Crystal Structure Of A Lectin From Canavalia Gladiata
Seeds (Cgl) In Complex With Man1-4man-Ome
pdb|2P2K|B Chain B, Crystal Structure Of A Lectin From Canavalia Gladiata
Seeds (Cgl) In Complex With Man1-4man-Ome
pdb|2P2K|C Chain C, Crystal Structure Of A Lectin From Canavalia Gladiata
Seeds (Cgl) In Complex With Man1-4man-Ome
pdb|2P2K|D Chain D, Crystal Structure Of A Lectin From Canavalia Gladiata
Seeds (Cgl) In Complex With Man1-4man-Ome
Length = 237
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 65/124 (52%), Gaps = 16/124 (12%)
Query: 133 ILAIELDTVQNLDFDDIDDNHVGIDVNSLISHESAPAAYFSDREGMNKTLELIIGDPIQI 192
I+A+ELDT N D D + H+GID+ S+ S ++A ++ + G T +I
Sbjct: 4 IVAVELDTYPNTDIGDPNYPHIGIDIKSVRSKKTAK---WNMQNGKVGTAHII------- 53
Query: 193 WISYDGAEKLLNVTLAPMSIPKPTKPLLSRAINLSHILLETMYVGFSASTGSLKSSHYVL 252
Y+ K L+ A +S P +S ++L ++L E + VG SASTG K ++ +L
Sbjct: 54 ---YNSVGKRLS---AVVSYPNGDSATVSYDVDLDNVLPEWVRVGLSASTGLYKETNTIL 107
Query: 253 GWSF 256
WSF
Sbjct: 108 SWSF 111
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 94/184 (51%), Gaps = 26/184 (14%)
Query: 390 AELVSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSL-DKIL-HTNIKPC---LNWYQ 444
E+ + +L H ++K++ + + ++ +V + M G L DK++ + +K L +YQ
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 445 RFRIIRGVASGLLYLHEDWEQVVLHRDIKPANVLL---DADLNGKLGDFGLARLYDHDTI 501
++ YLHE+ ++HRD+KP NVLL + D K+ DFG +++ ++
Sbjct: 123 MLLAVQ-------YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 172
Query: 502 PQTTKLVGTFGYMDPE-LMRTGKA--STSTDVYAFGVFMLEVASGRRPVEQQGSMETVNL 558
+T L GT Y+ PE L+ G A + + D ++ GV + SG P + + V+L
Sbjct: 173 MRT--LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ--VSL 228
Query: 559 VDWV 562
D +
Sbjct: 229 KDQI 232
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 88/206 (42%), Gaps = 20/206 (9%)
Query: 353 IGRGGFGKVYRGV-LASNVQIAVKKVS----------HDSKQGIKEFVAELVSMGRLRHR 401
+G G FG V+ V N ++ VK + D K G + E+ + R+ H
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLG--KVTLEIAILSRVEHA 89
Query: 402 NLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHE 461
N++K+ +G F LV + +G LD + P L+ I R + S + YL
Sbjct: 90 NIIKVLDIFENQGFFQLVMEKHGSG-LDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRL 148
Query: 462 DWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPE-LMR 520
+ ++HRDIK N+++ D KL DFG A + + T GT Y PE LM
Sbjct: 149 ---KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYT--FCGTIEYCAPEVLMG 203
Query: 521 TGKASTSTDVYAFGVFMLEVASGRRP 546
++++ GV + + P
Sbjct: 204 NPYRGPELEMWSLGVTLYTLVFEENP 229
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 94/184 (51%), Gaps = 26/184 (14%)
Query: 390 AELVSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSL-DKIL-HTNIKPC---LNWYQ 444
E+ + +L H ++K++ + + ++ +V + M G L DK++ + +K L +YQ
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 445 RFRIIRGVASGLLYLHEDWEQVVLHRDIKPANVLL---DADLNGKLGDFGLARLYDHDTI 501
++ YLHE+ ++HRD+KP NVLL + D K+ DFG +++ ++
Sbjct: 123 MLLAVQ-------YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 172
Query: 502 PQTTKLVGTFGYMDPE-LMRTGKA--STSTDVYAFGVFMLEVASGRRPVEQQGSMETVNL 558
+T L GT Y+ PE L+ G A + + D ++ GV + SG P + + V+L
Sbjct: 173 MRT--LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ--VSL 228
Query: 559 VDWV 562
D +
Sbjct: 229 KDQI 232
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 94/184 (51%), Gaps = 26/184 (14%)
Query: 390 AELVSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSL-DKIL-HTNIKPC---LNWYQ 444
E+ + +L H ++K++ + + ++ +V + M G L DK++ + +K L +YQ
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 445 RFRIIRGVASGLLYLHEDWEQVVLHRDIKPANVLL---DADLNGKLGDFGLARLYDHDTI 501
++ YLHE+ ++HRD+KP NVLL + D K+ DFG +++ ++
Sbjct: 123 MLLAVQ-------YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 172
Query: 502 PQTTKLVGTFGYMDPE-LMRTGKA--STSTDVYAFGVFMLEVASGRRPVEQQGSMETVNL 558
+T L GT Y+ PE L+ G A + + D ++ GV + SG P + + V+L
Sbjct: 173 MRT--LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ--VSL 228
Query: 559 VDWV 562
D +
Sbjct: 229 KDQI 232
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 94/184 (51%), Gaps = 26/184 (14%)
Query: 390 AELVSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSL-DKIL-HTNIKPC---LNWYQ 444
E+ + +L H ++K++ + + ++ +V + M G L DK++ + +K L +YQ
Sbjct: 70 TEIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 128
Query: 445 RFRIIRGVASGLLYLHEDWEQVVLHRDIKPANVLL---DADLNGKLGDFGLARLYDHDTI 501
++ YLHE+ ++HRD+KP NVLL + D K+ DFG +++ ++
Sbjct: 129 MLLAVQ-------YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 178
Query: 502 PQTTKLVGTFGYMDPE-LMRTGKA--STSTDVYAFGVFMLEVASGRRPVEQQGSMETVNL 558
+T L GT Y+ PE L+ G A + + D ++ GV + SG P + + V+L
Sbjct: 179 MRT--LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ--VSL 234
Query: 559 VDWV 562
D +
Sbjct: 235 KDQI 238
>pdb|1MVQ|A Chain A, Cratylia Mollis Lectin (Isoform 1) In Complex With
Methyl-Alpha-D- Mannose
Length = 236
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 61/124 (49%), Gaps = 16/124 (12%)
Query: 133 ILAIELDTVQNLDFDDIDDNHVGIDVNSLISHESAPAAYFSDREGMNKTLELIIGDPIQI 192
I+A+ELDT N D D H+GI++ S+ R ++ G
Sbjct: 4 IVAVELDTYPNTDIGDPSYQHIGINIKSI-------------RSKATTRWDVQNGKVGTA 50
Query: 193 WISYDGAEKLLNVTLAPMSIPKPTKPLLSRAINLSHILLETMYVGFSASTGSLKSSHYVL 252
ISY+ K L+ A +S P + +S ++L++IL E + VG SASTG K ++ +L
Sbjct: 51 HISYNSVAKRLS---AVVSYPGGSSATVSYDVDLNNILPEWVRVGLSASTGLYKETNTIL 107
Query: 253 GWSF 256
WSF
Sbjct: 108 SWSF 111
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 118/289 (40%), Gaps = 47/289 (16%)
Query: 353 IGRGGFGKVYRG------VLASNVQIAVKKV----SHDSKQGIKEFVAELVSMGRLRHRN 402
+GRG FG+V A+ +AVK + +H + + + L+ +G H N
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH--HLN 92
Query: 403 LVKLRGYCRRKG-EFLLVYDYMPNGSLDKILHTNIKPCLNW-------YQRFRIIR---- 450
+V L G C + G +++ ++ G+L L + + + Y+ F +
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 451 ---GVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDHDTIPQTTK 506
VA G+ +L + +HRD+ N+LL K+ DFGLAR +Y +
Sbjct: 153 YSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 209
Query: 507 LVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCDC 565
+M PE + + +DV++FGV + E+ S G P V + + C
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY------PGVKIDEEFCRR 263
Query: 566 WKKGAIRDASDSRLEGICEEKQMELVLKLGLFCSHPKPEARPNMRQVMQ 614
K+G A D + + L C H +P RP ++++
Sbjct: 264 LKEGTRMRAPDYTTPEM---------YQTMLDCWHGEPSQRPTFSELVE 303
>pdb|1AZD|A Chain A, Concanavalin From Canavalia Brasiliensis
pdb|1AZD|B Chain B, Concanavalin From Canavalia Brasiliensis
pdb|1AZD|C Chain C, Concanavalin From Canavalia Brasiliensis
pdb|1AZD|D Chain D, Concanavalin From Canavalia Brasiliensis
pdb|3JU9|A Chain A, Crystal Structure Of A Lectin From Canavalia Brasiliensis
Seed (conbr) Complexed With Alpha-aminobutyric Acid
pdb|4H55|A Chain A, Crystal Structure Of Canavalia Brasiliensis Seed Lectin
(Conbr) In Complex With Beta-D-Ribofuranose
Length = 237
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 64/124 (51%), Gaps = 16/124 (12%)
Query: 133 ILAIELDTVQNLDFDDIDDNHVGIDVNSLISHESAPAAYFSDREGMNKTLELIIGDPIQI 192
I+A+ELDT N D D H+GID+ S+ S ++A ++ + G T +I
Sbjct: 4 IVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAK---WNMQNGKVGTAHII------- 53
Query: 193 WISYDGAEKLLNVTLAPMSIPKPTKPLLSRAINLSHILLETMYVGFSASTGSLKSSHYVL 252
Y+ K L+ A +S P +S ++L ++L E + VG SASTG K ++ +L
Sbjct: 54 ---YNSVGKRLS---AVVSYPNGDSATVSYDVDLDNVLPEWVRVGLSASTGLYKETNTIL 107
Query: 253 GWSF 256
WSF
Sbjct: 108 SWSF 111
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 118/289 (40%), Gaps = 47/289 (16%)
Query: 353 IGRGGFGKVYRG------VLASNVQIAVKKV----SHDSKQGIKEFVAELVSMGRLRHRN 402
+GRG FG+V A+ +AVK + +H + + + L+ +G H N
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH--HLN 92
Query: 403 LVKLRGYCRRKG-EFLLVYDYMPNGSLDKILHTNIKPCLNW-------YQRFRIIR---- 450
+V L G C + G +++ ++ G+L L + + + Y+ F +
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 451 ---GVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDHDTIPQTTK 506
VA G+ +L + +HRD+ N+LL K+ DFGLAR +Y +
Sbjct: 153 YSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGD 209
Query: 507 LVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCDC 565
+M PE + + +DV++FGV + E+ S G P V + + C
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY------PGVKIDEEFCRR 263
Query: 566 WKKGAIRDASDSRLEGICEEKQMELVLKLGLFCSHPKPEARPNMRQVMQ 614
K+G A D + + L C H +P RP ++++
Sbjct: 264 LKEGTRMRAPDYTTPEM---------YQTMLDCWHGEPSQRPTFSELVE 303
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 118/289 (40%), Gaps = 47/289 (16%)
Query: 353 IGRGGFGKVYRG------VLASNVQIAVKKV----SHDSKQGIKEFVAELVSMGRLRHRN 402
+GRG FG+V A+ +AVK + +H + + + L+ +G H N
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH--HLN 94
Query: 403 LVKLRGYCRRKG-EFLLVYDYMPNGSLDKILHTNIKPCLNW-------YQRFRIIR---- 450
+V L G C + G +++ ++ G+L L + + + Y+ F +
Sbjct: 95 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLIC 154
Query: 451 ---GVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDHDTIPQTTK 506
VA G+ +L + +HRD+ N+LL K+ DFGLAR +Y +
Sbjct: 155 YSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 211
Query: 507 LVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCDC 565
+M PE + + +DV++FGV + E+ S G P V + + C
Sbjct: 212 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY------PGVKIDEEFCRR 265
Query: 566 WKKGAIRDASDSRLEGICEEKQMELVLKLGLFCSHPKPEARPNMRQVMQ 614
K+G A D + + L C H +P RP ++++
Sbjct: 266 LKEGTRMRAPDYTTPEM---------YQTMLDCWHGEPSQRPTFSELVE 305
>pdb|2CWM|A Chain A, Native Crystal Structure Of No Releasing Inductive Lectin
From Seeds Of The Canavalia Maritima (Conm)
pdb|2CWM|D Chain D, Native Crystal Structure Of No Releasing Inductive Lectin
From Seeds Of The Canavalia Maritima (Conm)
pdb|2CY6|A Chain A, Crystal Structure Of Conm In Complex With Trehalose And
Maltose
pdb|2CY6|D Chain D, Crystal Structure Of Conm In Complex With Trehalose And
Maltose
pdb|2CYF|A Chain A, The Crystal Structure Of Canavalia Maritima Lectin (Conm)
In Complex With Trehalose And Maltose
pdb|2CYF|C Chain C, The Crystal Structure Of Canavalia Maritima Lectin (Conm)
In Complex With Trehalose And Maltose
pdb|2P37|A Chain A, Crystal Structure Of A Lectin From Canavalia Maritima
Seeds (Cml) In Complex With Man1-3man-Ome
pdb|2P37|B Chain B, Crystal Structure Of A Lectin From Canavalia Maritima
Seeds (Cml) In Complex With Man1-3man-Ome
pdb|2P37|C Chain C, Crystal Structure Of A Lectin From Canavalia Maritima
Seeds (Cml) In Complex With Man1-3man-Ome
pdb|2P37|D Chain D, Crystal Structure Of A Lectin From Canavalia Maritima
Seeds (Cml) In Complex With Man1-3man-Ome
pdb|2P34|A Chain A, Crystal Structure Of A Lectin From Canavalia Maritima
Seeds (Cml) In Complex With Man1-4man-Ome
pdb|2P34|B Chain B, Crystal Structure Of A Lectin From Canavalia Maritima
Seeds (Cml) In Complex With Man1-4man-Ome
pdb|2P34|C Chain C, Crystal Structure Of A Lectin From Canavalia Maritima
Seeds (Cml) In Complex With Man1-4man-Ome
pdb|2P34|D Chain D, Crystal Structure Of A Lectin From Canavalia Maritima
Seeds (Cml) In Complex With Man1-4man-Ome
pdb|3SNM|A Chain A, Crystal Structure Of A Lectin From Canavalia Maritima
Seeds Complexed With Indole-3-Acetic Acid
pdb|4I30|A Chain A, Crystal Structure Of Canavalia Maritima Seeds Lectin
(Conm) Co- Crystalized With Gamma-Aminobutyric Acid
(Gaba) And Soaked With Adenine
Length = 237
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 64/124 (51%), Gaps = 16/124 (12%)
Query: 133 ILAIELDTVQNLDFDDIDDNHVGIDVNSLISHESAPAAYFSDREGMNKTLELIIGDPIQI 192
I+A+ELDT N D D H+GID+ S+ S ++A ++ + G T +I
Sbjct: 4 IVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAK---WNMQNGKVGTAHII------- 53
Query: 193 WISYDGAEKLLNVTLAPMSIPKPTKPLLSRAINLSHILLETMYVGFSASTGSLKSSHYVL 252
Y+ K L+ A +S P +S ++L ++L E + VG SASTG K ++ +L
Sbjct: 54 ---YNSVGKRLS---AVVSYPNGDSATVSYDVDLDNVLPEWVRVGLSASTGLYKETNTIL 107
Query: 253 GWSF 256
WSF
Sbjct: 108 SWSF 111
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 120/290 (41%), Gaps = 49/290 (16%)
Query: 353 IGRGGFGKVYRG------VLASNVQIAVKKV----SHDSKQGIKEFVAELVSMGRLRHRN 402
+GRG FG+V A+ +AVK + +H + + + L+ +G H N
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH--HLN 92
Query: 403 LVKLRGYCRRKG-EFLLVYDYMPNGSLDKILHTNIKPCLNW-------YQRFRIIR---- 450
+V L G C + G +++ ++ G+L L + + + Y+ F +
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 451 ---GVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR--LYDHDTIPQTT 505
VA G+ +L + +HRD+ N+LL K+ DFGLAR D D + +
Sbjct: 153 YSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 506 KLVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCD 564
+ +M PE + + +DV++FGV + E+ S G P V + + C
Sbjct: 210 ARL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY------PGVKIDEEFCR 262
Query: 565 CWKKGAIRDASDSRLEGICEEKQMELVLKLGLFCSHPKPEARPNMRQVMQ 614
K+G A D + + L C H +P RP ++++
Sbjct: 263 RLKEGTRMRAPDYTTPEM---------YQTMLDCWHGEPSQRPTFSELVE 303
>pdb|2OW4|A Chain A, Crystal Structure Of A Lectin From Canavalia Maritima
Seeds (Conm) In Complex With Man1-2man-Ome
Length = 237
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 64/124 (51%), Gaps = 16/124 (12%)
Query: 133 ILAIELDTVQNLDFDDIDDNHVGIDVNSLISHESAPAAYFSDREGMNKTLELIIGDPIQI 192
I+A+ELDT N D D H+GID+ S+ S ++A ++ + G T +I
Sbjct: 4 IVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAK---WNMQNGKVGTAHII------- 53
Query: 193 WISYDGAEKLLNVTLAPMSIPKPTKPLLSRAINLSHILLETMYVGFSASTGSLKSSHYVL 252
Y+ K L+ A +S P +S ++L ++L E + VG SASTG K ++ +L
Sbjct: 54 ---YNSVGKRLS---AVVSYPNGDSATVSYDVDLDNVLPEWVRVGLSASTGLYKETNTIL 107
Query: 253 GWSF 256
WSF
Sbjct: 108 SWSF 111
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 95/207 (45%), Gaps = 19/207 (9%)
Query: 347 FKDKDVIGRGGFGKVYRGVLASNVQI----AVKKVSHDSKQGIKEFVAELVSMGRLRHRN 402
F+ +G G FG+V +L +++ A+K + +KE L L+ N
Sbjct: 43 FERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN 99
Query: 403 ---LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYL 459
LVKL + +V +Y P G + L I + RF + V + YL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR-RIGRFSEPHARFYAAQIVLT-FEYL 157
Query: 460 HEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELM 519
H +++RD+KP N+++D ++ DFGLA+ +T L GT Y+ PE++
Sbjct: 158 HS---LDLIYRDLKPENLMIDQQGYIQVTDFGLAK----RVKGRTWXLCGTPEYLAPEII 210
Query: 520 RTGKASTSTDVYAFGVFMLEVASGRRP 546
+ + + D +A GV + E+A+G P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 109/229 (47%), Gaps = 27/229 (11%)
Query: 347 FKDKDVIGRGGFGKVYRGVLAS-----NVQIAVKKVSH-DSKQGIKEFVAELVSMGRLRH 400
FK V+ G FG VY+G+ + +A+K++ S + KE + E M + +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHT---NI--KPCLNWYQRFRIIRGVASG 455
++ +L G C L+ MP G L + NI + LNW + +A G
Sbjct: 84 PHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 136
Query: 456 LLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLY---DHDTIPQTTKLVGTFG 512
+ YL + + ++HRD+ NVL+ + K+ DFGLA+L + + + K+ +
Sbjct: 137 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 513 YMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVD 560
++ L R + +DV+++GV + E+ + G +P + + E ++++
Sbjct: 194 ALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 240
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 118/289 (40%), Gaps = 47/289 (16%)
Query: 353 IGRGGFGKVYRG------VLASNVQIAVKKV----SHDSKQGIKEFVAELVSMGRLRHRN 402
+GRG FG+V A+ +AVK + +H + + + L+ +G H N
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH--HLN 83
Query: 403 LVKLRGYCRRKG-EFLLVYDYMPNGSLDKILHTNIKPCLNW-------YQRFRIIR---- 450
+V L G C + G +++ ++ G+L L + + + Y+ F +
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 451 ---GVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDHDTIPQTTK 506
VA G+ +L + +HRD+ N+LL K+ DFGLAR +Y +
Sbjct: 144 YSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 200
Query: 507 LVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCDC 565
+M PE + + +DV++FGV + E+ S G P V + + C
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP------YPGVKIDEEFCRR 254
Query: 566 WKKGAIRDASDSRLEGICEEKQMELVLKLGLFCSHPKPEARPNMRQVMQ 614
K+G A D + + L C H +P RP ++++
Sbjct: 255 LKEGTRMRAPDYTTPEM---------YQTMLDCWHGEPSQRPTFSELVE 294
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 109/229 (47%), Gaps = 27/229 (11%)
Query: 347 FKDKDVIGRGGFGKVYRGVLAS-----NVQIAVKKVSH-DSKQGIKEFVAELVSMGRLRH 400
FK V+ G FG VY+G+ + +A+K++ S + KE + E M + +
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHT---NI--KPCLNWYQRFRIIRGVASG 455
++ +L G C L+ MP G L + NI + LNW + +A G
Sbjct: 77 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 129
Query: 456 LLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLY---DHDTIPQTTKLVGTFG 512
+ YL + + ++HRD+ NVL+ + K+ DFGLA+L + + + K+ +
Sbjct: 130 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 513 YMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVD 560
++ L R + +DV+++GV + E+ + G +P + + E ++++
Sbjct: 187 ALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 233
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 118/289 (40%), Gaps = 47/289 (16%)
Query: 353 IGRGGFGKVYRG------VLASNVQIAVKKV----SHDSKQGIKEFVAELVSMGRLRHRN 402
+GRG FG+V A+ +AVK + +H + + + L+ +G H N
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH--HLN 83
Query: 403 LVKLRGYCRRKG-EFLLVYDYMPNGSLDKILHTNIKPCLNW-------YQRFRIIR---- 450
+V L G C + G +++ ++ G+L L + + + Y+ F +
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 451 ---GVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDHDTIPQTTK 506
VA G+ +L + +HRD+ N+LL K+ DFGLAR +Y +
Sbjct: 144 YSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 200
Query: 507 LVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCDC 565
+M PE + + +DV++FGV + E+ S G P V + + C
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP------YPGVKIDEEFCRR 254
Query: 566 WKKGAIRDASDSRLEGICEEKQMELVLKLGLFCSHPKPEARPNMRQVMQ 614
K+G A D + + L C H +P RP ++++
Sbjct: 255 LKEGTRMRAPDYTTPEM---------YQTMLDCWHGEPSQRPTFSELVE 294
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 118/289 (40%), Gaps = 47/289 (16%)
Query: 353 IGRGGFGKVYRG------VLASNVQIAVKKV----SHDSKQGIKEFVAELVSMGRLRHRN 402
+GRG FG+V A+ +AVK + +H + + + L+ +G H N
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH--HLN 129
Query: 403 LVKLRGYCRRKG-EFLLVYDYMPNGSLDKILHTNIKPCLNW-------YQRFRIIR---- 450
+V L G C + G +++ ++ G+L L + + + Y+ F +
Sbjct: 130 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 189
Query: 451 ---GVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR-LYDHDTIPQTTK 506
VA G+ +L + +HRD+ N+LL K+ DFGLAR +Y +
Sbjct: 190 YSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 246
Query: 507 LVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCDC 565
+M PE + + +DV++FGV + E+ S G P V + + C
Sbjct: 247 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP------YPGVKIDEEFCRR 300
Query: 566 WKKGAIRDASDSRLEGICEEKQMELVLKLGLFCSHPKPEARPNMRQVMQ 614
K+G A D + + L C H +P RP ++++
Sbjct: 301 LKEGTRMRAPDYTTPEMYQTM---------LDCWHGEPSQRPTFSELVE 340
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 109/229 (47%), Gaps = 27/229 (11%)
Query: 347 FKDKDVIGRGGFGKVYRGVLAS-----NVQIAVKKVSH-DSKQGIKEFVAELVSMGRLRH 400
FK V+G G FG VY+G+ + +A+K++ S + KE + E M + +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHT---NI--KPCLNWYQRFRIIRGVASG 455
++ +L G C L+ MP G L + NI + LNW + +A G
Sbjct: 81 PHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 133
Query: 456 LLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLY---DHDTIPQTTKLVGTFG 512
+ YL + + ++HRD+ NVL+ + K+ DFG A+L + + + K+ +
Sbjct: 134 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 190
Query: 513 YMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVD 560
++ L R + +DV+++GV + E+ + G +P + + E ++++
Sbjct: 191 ALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 237
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 120/290 (41%), Gaps = 49/290 (16%)
Query: 353 IGRGGFGKVYRG------VLASNVQIAVKKV----SHDSKQGIKEFVAELVSMGRLRHRN 402
+GRG FG+V A+ +AVK + +H + + + L+ +G H N
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH--HLN 83
Query: 403 LVKLRGYCRRKG-EFLLVYDYMPNGSLDKILHTNIKPCLNW-------YQRFRIIR---- 450
+V L G C + G +++ ++ G+L L + + + Y+ F +
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 451 ---GVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR--LYDHDTIPQTT 505
VA G+ +L + +HRD+ N+LL K+ DFGLAR D D + +
Sbjct: 144 YSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 200
Query: 506 KLVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCD 564
+ +M PE + + +DV++FGV + E+ S G P V + + C
Sbjct: 201 ARL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP------YPGVKIDEEFCR 253
Query: 565 CWKKGAIRDASDSRLEGICEEKQMELVLKLGLFCSHPKPEARPNMRQVMQ 614
K+G A D + + L C H +P RP ++++
Sbjct: 254 RLKEGTRMRAPDYTTPEM---------YQTMLDCWHGEPSQRPTFSELVE 294
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 99/223 (44%), Gaps = 33/223 (14%)
Query: 352 VIGRGGFGKVYR----GVLASN--VQIAVKKVSHDSKQGIKE-FVAELVSMGRL-RHRNL 403
+G G FGKV G++ S+ + +AVK + + +E ++EL + L H N+
Sbjct: 46 TLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNI 105
Query: 404 VKLRGYCRRKGEFLLVYDYMPNGSL--------DKILHTNIKPCLNWYQRFRIIRG---- 451
V L G C G L++ +Y G L D + + P + +
Sbjct: 106 VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLS 165
Query: 452 ----VASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDT---IPQT 504
VA G+ +L + +HRD+ N+LL K+ DFGLAR +D+ +
Sbjct: 166 FSYQVAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN 222
Query: 505 TKLVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRP 546
+L +M PE + + +DV+++G+F+ E+ S G P
Sbjct: 223 ARL--PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 263
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 14/106 (13%)
Query: 446 FRIIRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTT 505
I +A + +LH + ++HRD+KP+N+ D K+GDFGL D D QT
Sbjct: 167 LHIFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 506 KL-----------VGTFGYMDPELMRTGKASTSTDVYAFGVFMLEV 540
VGT YM PE + S D+++ G+ + E+
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFEL 269
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 99/223 (44%), Gaps = 33/223 (14%)
Query: 352 VIGRGGFGKVYR----GVLASN--VQIAVKKVSHDSKQGIKE-FVAELVSMGRL-RHRNL 403
+G G FGKV G++ S+ + +AVK + + +E ++EL + L H N+
Sbjct: 53 TLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNI 112
Query: 404 VKLRGYCRRKGEFLLVYDYMPNGSL--------DKILHTNIKPCLNWYQRFRIIRG---- 451
V L G C G L++ +Y G L D + + P + +
Sbjct: 113 VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLS 172
Query: 452 ----VASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDT---IPQT 504
VA G+ +L + +HRD+ N+LL K+ DFGLAR +D+ +
Sbjct: 173 FSYQVAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGN 229
Query: 505 TKLVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRP 546
+L +M PE + + +DV+++G+F+ E+ S G P
Sbjct: 230 ARL--PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 270
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 109/229 (47%), Gaps = 27/229 (11%)
Query: 347 FKDKDVIGRGGFGKVYRGVLAS-----NVQIAVKKVSH-DSKQGIKEFVAELVSMGRLRH 400
FK V+G G FG VY+G+ + +A+K++ S + KE + E M + +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHT---NI--KPCLNWYQRFRIIRGVASG 455
++ +L G C L+ MP G L + NI + LNW + +A G
Sbjct: 79 PHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 131
Query: 456 LLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLY---DHDTIPQTTKLVGTFG 512
+ YL + + ++HRD+ NVL+ + K+ DFG A+L + + + K+ +
Sbjct: 132 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 513 YMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVD 560
++ L R + +DV+++GV + E+ + G +P + + E ++++
Sbjct: 189 ALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 235
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 120/290 (41%), Gaps = 49/290 (16%)
Query: 353 IGRGGFGKVYRG------VLASNVQIAVKKV----SHDSKQGIKEFVAELVSMGRLRHRN 402
+GRG FG+V A+ +AVK + +H + + + L+ +G H N
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH--HLN 83
Query: 403 LVKLRGYCRRKG-EFLLVYDYMPNGSLDKILHTNIKPCLNW-------YQRFRIIR---- 450
+V L G C + G +++ ++ G+L L + + + Y+ F +
Sbjct: 84 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 451 ---GVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLAR--LYDHDTIPQTT 505
VA G+ +L + +HRD+ N+LL K+ DFGLAR D D + +
Sbjct: 144 YSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 200
Query: 506 KLVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVDWVCD 564
+ +M PE + + +DV++FGV + E+ S G P V + + C
Sbjct: 201 ARL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP------YPGVKIDEEFCR 253
Query: 565 CWKKGAIRDASDSRLEGICEEKQMELVLKLGLFCSHPKPEARPNMRQVMQ 614
K+G A D + + L C H +P RP ++++
Sbjct: 254 RLKEGTRMRAPDYTTPEM---------YQTMLDCWHGEPSQRPTFSELVE 294
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 95/212 (44%), Gaps = 21/212 (9%)
Query: 353 IGRGGFGKVYRGVLASNVQI-AVKKVSHDS--KQGIKEFVAELVSMGRLRHRNLVKLRGY 409
IG GG KV++ VL QI A+K V+ + Q + + E+ + +L+ + +R Y
Sbjct: 64 IGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 122
Query: 410 CRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLH 469
+ +Y M G++D K ++ ++R + + + +H+ ++H
Sbjct: 123 DYEITD-QYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ---HGIVH 178
Query: 470 RDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTT-KLVGTFGYMDPELMRTGKASTST 528
D+KPAN L+ D KL DFG+A DT VGT YM PE ++ +S
Sbjct: 179 SDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSREN 237
Query: 529 -----------DVYAFGVFMLEVASGRRPVEQ 549
DV++ G + + G+ P +Q
Sbjct: 238 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 269
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 109/229 (47%), Gaps = 27/229 (11%)
Query: 347 FKDKDVIGRGGFGKVYRGVLAS-----NVQIAVKKVSH-DSKQGIKEFVAELVSMGRLRH 400
FK V+G G FG VY+G+ + +A+K++ S + KE + E M + +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHT---NI--KPCLNWYQRFRIIRGVASG 455
++ +L G C L+ MP G L + NI + LNW + +A G
Sbjct: 79 PHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 131
Query: 456 LLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLY---DHDTIPQTTKLVGTFG 512
+ YL + + ++HRD+ NVL+ + K+ DFG A+L + + + K+ +
Sbjct: 132 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 513 YMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVD 560
++ L R + +DV+++GV + E+ + G +P + + E ++++
Sbjct: 189 ALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 235
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 88/172 (51%), Gaps = 24/172 (13%)
Query: 390 AELVSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSL-DKIL-HTNIKPC---LNWYQ 444
E+ + +L H ++K++ + + ++ +V + M G L DK++ + +K L +YQ
Sbjct: 203 TEIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 261
Query: 445 RFRIIRGVASGLLYLHEDWEQVVLHRDIKPANVLL---DADLNGKLGDFGLARLYDHDTI 501
++ YLHE+ ++HRD+KP NVLL + D K+ DFG +++ ++
Sbjct: 262 MLLAVQ-------YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 311
Query: 502 PQTTKLVGTFGYMDPE-LMRTGKA--STSTDVYAFGVFMLEVASGRRPVEQQ 550
+T L GT Y+ PE L+ G A + + D ++ GV + SG P +
Sbjct: 312 MRT--LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 361
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 109/229 (47%), Gaps = 27/229 (11%)
Query: 347 FKDKDVIGRGGFGKVYRGVLAS-----NVQIAVKKVSH-DSKQGIKEFVAELVSMGRLRH 400
FK V+ G FG VY+G+ + +A+K++ S + KE + E M + +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHT---NI--KPCLNWYQRFRIIRGVASG 455
++ +L G C L+ MP G L + NI + LNW + +A G
Sbjct: 84 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 136
Query: 456 LLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLY---DHDTIPQTTKLVGTFG 512
+ YL + + ++HRD+ NVL+ + K+ DFGLA+L + + + K+ +
Sbjct: 137 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 513 YMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVD 560
++ L R + +DV+++GV + E+ + G +P + + E ++++
Sbjct: 194 ALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 240
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 69/144 (47%), Gaps = 9/144 (6%)
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHED 462
LVKL + +V +Y P G + L I + RF + V + YLH
Sbjct: 104 LVKLEFSFKDNSNLYMVLEYAPGGEMFSHLR-RIGRFSEPHARFYAAQIVLT-FEYLHS- 160
Query: 463 WEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTG 522
+++RD+KP N+L+D K+ DFG A+ +T L GT Y+ PE++ +
Sbjct: 161 --LDLIYRDLKPENLLIDQQGYIKVADFGFAK----RVKGRTWXLCGTPEYLAPEIILSK 214
Query: 523 KASTSTDVYAFGVFMLEVASGRRP 546
+ + D +A GV + E+A+G P
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 99/223 (44%), Gaps = 33/223 (14%)
Query: 352 VIGRGGFGKVYR----GVLASN--VQIAVKKVSHDSKQGIKE-FVAELVSMGRL-RHRNL 403
+G G FGKV G++ S+ + +AVK + + +E ++EL + L H N+
Sbjct: 48 TLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNI 107
Query: 404 VKLRGYCRRKGEFLLVYDYMPNGSL--------DKILHTNIKPCLNWYQRFRIIRG---- 451
V L G C G L++ +Y G L D + + P + +
Sbjct: 108 VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLS 167
Query: 452 ----VASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDT---IPQT 504
VA G+ +L + +HRD+ N+LL K+ DFGLAR +D+ +
Sbjct: 168 FSYQVAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN 224
Query: 505 TKLVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRP 546
+L +M PE + + +DV+++G+F+ E+ S G P
Sbjct: 225 ARL--PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 265
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 99/223 (44%), Gaps = 33/223 (14%)
Query: 352 VIGRGGFGKVYR----GVLASN--VQIAVKKVSHDSKQGIKE-FVAELVSMGRL-RHRNL 403
+G G FGKV G++ S+ + +AVK + + +E ++EL + L H N+
Sbjct: 53 TLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNI 112
Query: 404 VKLRGYCRRKGEFLLVYDYMPNGSL--------DKILHTNIKPCLNWYQRFRIIRG---- 451
V L G C G L++ +Y G L D + + P + +
Sbjct: 113 VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLS 172
Query: 452 ----VASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDT---IPQT 504
VA G+ +L + +HRD+ N+LL K+ DFGLAR +D+ +
Sbjct: 173 FSYQVAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN 229
Query: 505 TKLVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRP 546
+L +M PE + + +DV+++G+F+ E+ S G P
Sbjct: 230 ARL--PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 270
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 99/211 (46%), Gaps = 20/211 (9%)
Query: 344 TKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGIKEFVAELVSMGRLRHRN 402
T G++ K+ IG G + R + A+N + AVK + SK+ E + L+ G+ H N
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIID-KSKRDPTEEIEILLRYGQ--HPN 77
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGS--LDKILHTNIKPCLNWYQRFRIIRGVASGLLYLH 460
++ L+ G+++ V + G LDKIL + + ++ + + YLH
Sbjct: 78 IITLKD-VYDDGKYVYVVTELXKGGELLDKILRQKF---FSEREASAVLFTITKTVEYLH 133
Query: 461 EDWEQVVLHRDIKPANVLLDADLNG-----KLGDFGLARLYDHDTIPQTTKLVGTFGYMD 515
Q V+HRD+KP+N+L D +G ++ DFG A+ + T T ++
Sbjct: 134 A---QGVVHRDLKPSNILY-VDESGNPESIRICDFGFAKQLRAENGLLXTPCY-TANFVA 188
Query: 516 PELMRTGKASTSTDVYAFGVFMLEVASGRRP 546
PE++ + D+++ GV + +G P
Sbjct: 189 PEVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|2JEC|A Chain A, Crystal Structure Of Recombinant Dioclea Grandiflora
Lectin Mutant E123a-H131n-K132q Complexed With
5-Bromo-4-Chloro-3- Indolyl-A-D-Mannose
pdb|2JEC|B Chain B, Crystal Structure Of Recombinant Dioclea Grandiflora
Lectin Mutant E123a-H131n-K132q Complexed With
5-Bromo-4-Chloro-3- Indolyl-A-D-Mannose
pdb|2JEC|C Chain C, Crystal Structure Of Recombinant Dioclea Grandiflora
Lectin Mutant E123a-H131n-K132q Complexed With
5-Bromo-4-Chloro-3- Indolyl-A-D-Mannose
pdb|2JEC|D Chain D, Crystal Structure Of Recombinant Dioclea Grandiflora
Lectin Mutant E123a-H131n-K132q Complexed With
5-Bromo-4-Chloro-3- Indolyl-A-D-Mannose
Length = 239
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 64/124 (51%), Gaps = 16/124 (12%)
Query: 133 ILAIELDTVQNLDFDDIDDNHVGIDVNSLISHESAPAAYFSDREGMNKTLELIIGDPIQI 192
I+A+ELD+ N D D + H+GID+ S+ S +A R M G +
Sbjct: 6 IVAVELDSYPNTDIGDPNYPHIGIDIKSIRSKSTA-------RWNMQT------GKVGTV 52
Query: 193 WISYDGAEKLLNVTLAPMSIPKPTKPLLSRAINLSHILLETMYVGFSASTGSLKSSHYVL 252
ISY+ K L+ A +S + +S ++L+++L E + VG SA+TG K ++ +L
Sbjct: 53 HISYNSVAKRLS---AVVSYSGSSSTTVSYDVDLNNVLPEWVRVGLSATTGLYKETNTIL 109
Query: 253 GWSF 256
WSF
Sbjct: 110 SWSF 113
>pdb|2JE9|A Chain A, Crystal Structure Of Recombinant Dioclea Grandiflora
Lectin Complexed With
5-Bromo-4-Chloro-3-Indolyl-A-D-Mannose
pdb|2JE9|B Chain B, Crystal Structure Of Recombinant Dioclea Grandiflora
Lectin Complexed With
5-Bromo-4-Chloro-3-Indolyl-A-D-Mannose
pdb|2JE9|C Chain C, Crystal Structure Of Recombinant Dioclea Grandiflora
Lectin Complexed With
5-Bromo-4-Chloro-3-Indolyl-A-D-Mannose
pdb|2JE9|D Chain D, Crystal Structure Of Recombinant Dioclea Grandiflora
Lectin Complexed With
5-Bromo-4-Chloro-3-Indolyl-A-D-Mannose
Length = 239
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 64/124 (51%), Gaps = 16/124 (12%)
Query: 133 ILAIELDTVQNLDFDDIDDNHVGIDVNSLISHESAPAAYFSDREGMNKTLELIIGDPIQI 192
I+A+ELD+ N D D + H+GID+ S+ S +A R M G +
Sbjct: 6 IVAVELDSYPNTDIGDPNYPHIGIDIKSIRSKSTA-------RWNMQT------GKVGTV 52
Query: 193 WISYDGAEKLLNVTLAPMSIPKPTKPLLSRAINLSHILLETMYVGFSASTGSLKSSHYVL 252
ISY+ K L+ A +S + +S ++L+++L E + VG SA+TG K ++ +L
Sbjct: 53 HISYNSVAKRLS---AVVSYSGSSSTTVSYDVDLNNVLPEWVRVGLSATTGLYKETNTIL 109
Query: 253 GWSF 256
WSF
Sbjct: 110 SWSF 113
>pdb|2GDF|A Chain A, Crystal Structure Of Dioclea Violacea Seed Lectin
pdb|2GDF|B Chain B, Crystal Structure Of Dioclea Violacea Seed Lectin
pdb|2GDF|C Chain C, Crystal Structure Of Dioclea Violacea Seed Lectin
pdb|2GDF|D Chain D, Crystal Structure Of Dioclea Violacea Seed Lectin
pdb|3AX4|A Chain A, Three-Dimensional Structure Of Lectin From Dioclea
Violacea And Comparative Vasorelaxant Effects With
Dioclea Rostrata
Length = 237
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 64/124 (51%), Gaps = 16/124 (12%)
Query: 133 ILAIELDTVQNLDFDDIDDNHVGIDVNSLISHESAPAAYFSDREGMNKTLELIIGDPIQI 192
I+A+ELD+ N D D + H+GID+ S+ S +A R M G +
Sbjct: 4 IVAVELDSYPNTDIGDPNYPHIGIDIKSIRSKSTA-------RWNMQT------GKVGTV 50
Query: 193 WISYDGAEKLLNVTLAPMSIPKPTKPLLSRAINLSHILLETMYVGFSASTGSLKSSHYVL 252
ISY+ K L+ A +S + +S ++L+++L E + VG SA+TG K ++ +L
Sbjct: 51 HISYNSVAKRLS---AVVSYSGSSSTTVSYDVDLNNVLPEWVRVGLSATTGLYKETNTIL 107
Query: 253 GWSF 256
WSF
Sbjct: 108 SWSF 111
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 99/223 (44%), Gaps = 33/223 (14%)
Query: 352 VIGRGGFGKVYR----GVLASN--VQIAVKKVSHDSKQGIKE-FVAELVSMGRL-RHRNL 403
+G G FGKV G++ S+ + +AVK + + +E ++EL + L H N+
Sbjct: 30 TLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNI 89
Query: 404 VKLRGYCRRKGEFLLVYDYMPNGSL--------DKILHTNIKPCLNWYQRFRIIRG---- 451
V L G C G L++ +Y G L D + + P + +
Sbjct: 90 VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLS 149
Query: 452 ----VASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDT---IPQT 504
VA G+ +L + +HRD+ N+LL K+ DFGLAR +D+ +
Sbjct: 150 FSYQVAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN 206
Query: 505 TKLVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRP 546
+L +M PE + + +DV+++G+F+ E+ S G P
Sbjct: 207 ARL--PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 247
>pdb|3SH3|A Chain A, Crystal Structure Of A Pro-Inflammatory Lectin From The
Seeds Of Dioclea Wilsonii Standl
Length = 237
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 64/124 (51%), Gaps = 16/124 (12%)
Query: 133 ILAIELDTVQNLDFDDIDDNHVGIDVNSLISHESAPAAYFSDREGMNKTLELIIGDPIQI 192
I+A+ELD+ N D D + H+GID+ S+ S +A R M G +
Sbjct: 4 IVAVELDSYPNTDIGDPNYPHIGIDIKSIRSKSTA-------RWNMQT------GKVGTV 50
Query: 193 WISYDGAEKLLNVTLAPMSIPKPTKPLLSRAINLSHILLETMYVGFSASTGSLKSSHYVL 252
ISY+ K L+ A +S + +S ++L+++L E + VG SA+TG K ++ +L
Sbjct: 51 HISYNSVAKRLS---AVVSYSGSSSTTVSYDVDLNNVLPEWVRVGLSATTGLYKETNTIL 107
Query: 253 GWSF 256
WSF
Sbjct: 108 SWSF 111
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 109/229 (47%), Gaps = 27/229 (11%)
Query: 347 FKDKDVIGRGGFGKVYRGVLAS-----NVQIAVKKVSH-DSKQGIKEFVAELVSMGRLRH 400
FK V+G G FG VY+G+ + +A+K++ S + KE + E M + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHT---NI--KPCLNWYQRFRIIRGVASG 455
++ +L G C L+ MP G L + NI + LNW + +A G
Sbjct: 77 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 129
Query: 456 LLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLY---DHDTIPQTTKLVGTFG 512
+ YL + + ++HRD+ NVL+ + K+ DFG A+L + + + K+ +
Sbjct: 130 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 513 YMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVD 560
++ L R + +DV+++GV + E+ + G +P + + E ++++
Sbjct: 187 ALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 233
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 109/229 (47%), Gaps = 27/229 (11%)
Query: 347 FKDKDVIGRGGFGKVYRGVLAS-----NVQIAVKKVSH-DSKQGIKEFVAELVSMGRLRH 400
FK V+G G FG VY+G+ + +A+K++ S + KE + E M + +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHT---NI--KPCLNWYQRFRIIRGVASG 455
++ +L G C L+ MP G L + NI + LNW + +A G
Sbjct: 79 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 131
Query: 456 LLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLY---DHDTIPQTTKLVGTFG 512
+ YL + + ++HRD+ NVL+ + K+ DFG A+L + + + K+ +
Sbjct: 132 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 513 YMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVD 560
++ L R + +DV+++GV + E+ + G +P + + E ++++
Sbjct: 189 ALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 235
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 107/265 (40%), Gaps = 37/265 (13%)
Query: 352 VIGRGGFGKVYRGVLAS-NVQIAVKKVSHDSKQGIKEFV------AELVSMGRLRH--RN 402
++G GGFG VY G+ S N+ +A+K V D E E+V + ++
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHED 462
+++L + R F+L+ + P D + L V + + H
Sbjct: 104 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN- 161
Query: 463 WEQVVLHRDIKPANVLLDADLNG-KLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRT 521
VLHRDIK N+L+D + KL DFG L DT+ T GT Y PE +R
Sbjct: 162 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTV--YTDFDGTRVYSPPEWIRY 216
Query: 522 GK-ASTSTDVYAFGVFMLEVASGRRPVE-------------QQGSMETVNLVDWVCDCWK 567
+ S V++ G+ + ++ G P E Q+ S E +L+ W
Sbjct: 217 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXECQHLIRWCL---- 272
Query: 568 KGAIRDASDSRLEGICEEKQMELVL 592
A+R + E I M+ VL
Sbjct: 273 --ALRPSDRPTFEEIQNHPWMQDVL 295
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 95/212 (44%), Gaps = 21/212 (9%)
Query: 353 IGRGGFGKVYRGVLASNVQI-AVKKVSHDS--KQGIKEFVAELVSMGRLRHRNLVKLRGY 409
IG GG KV++ VL QI A+K V+ + Q + + E+ + +L+ + +R Y
Sbjct: 36 IGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 94
Query: 410 CRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLH 469
+ +Y M G++D K ++ ++R + + + +H+ ++H
Sbjct: 95 DYEITD-QYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ---HGIVH 150
Query: 470 RDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTT-KLVGTFGYMDPELMRTGKASTST 528
D+KPAN L+ D KL DFG+A DT VGT YM PE ++ +S
Sbjct: 151 SDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSREN 209
Query: 529 -----------DVYAFGVFMLEVASGRRPVEQ 549
DV++ G + + G+ P +Q
Sbjct: 210 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 241
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 88/172 (51%), Gaps = 24/172 (13%)
Query: 390 AELVSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSL-DKIL-HTNIKPC---LNWYQ 444
E+ + +L H ++K++ + + ++ +V + M G L DK++ + +K L +YQ
Sbjct: 189 TEIEILKKLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 247
Query: 445 RFRIIRGVASGLLYLHEDWEQVVLHRDIKPANVLL---DADLNGKLGDFGLARLYDHDTI 501
++ YLHE+ ++HRD+KP NVLL + D K+ DFG +++ ++
Sbjct: 248 MLLAVQ-------YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 297
Query: 502 PQTTKLVGTFGYMDPE-LMRTGKA--STSTDVYAFGVFMLEVASGRRPVEQQ 550
+T L GT Y+ PE L+ G A + + D ++ GV + SG P +
Sbjct: 298 MRT--LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 347
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 107/265 (40%), Gaps = 37/265 (13%)
Query: 352 VIGRGGFGKVYRGVLAS-NVQIAVKKVSHDSKQGIKEFV------AELVSMGRLRH--RN 402
++G GGFG VY G+ S N+ +A+K V D E E+V + ++
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHED 462
+++L + R F+L+ + P D + L V + + H
Sbjct: 90 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN- 147
Query: 463 WEQVVLHRDIKPANVLLDADLNG-KLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRT 521
VLHRDIK N+L+D + KL DFG L DT+ T GT Y PE +R
Sbjct: 148 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTV--YTDFDGTRVYSPPEWIRY 202
Query: 522 GK-ASTSTDVYAFGVFMLEVASGRRPVE-------------QQGSMETVNLVDWVCDCWK 567
+ S V++ G+ + ++ G P E Q+ S E +L+ W
Sbjct: 203 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCL---- 258
Query: 568 KGAIRDASDSRLEGICEEKQMELVL 592
A+R + E I M+ VL
Sbjct: 259 --ALRPSDRPTFEEIQNHPWMQDVL 281
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 107/265 (40%), Gaps = 37/265 (13%)
Query: 352 VIGRGGFGKVYRGVLAS-NVQIAVKKVSHDSKQGIKEFV------AELVSMGRLRH--RN 402
++G GGFG VY G+ S N+ +A+K V D E E+V + ++
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHED 462
+++L + R F+L+ + P D + L V + + H
Sbjct: 71 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN- 128
Query: 463 WEQVVLHRDIKPANVLLDADLNG-KLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRT 521
VLHRDIK N+L+D + KL DFG L DT+ T GT Y PE +R
Sbjct: 129 --XGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTV--YTDFDGTRVYSPPEWIRY 183
Query: 522 GK-ASTSTDVYAFGVFMLEVASGRRPVE-------------QQGSMETVNLVDWVCDCWK 567
+ S V++ G+ + ++ G P E Q+ S E +L+ W
Sbjct: 184 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCL---- 239
Query: 568 KGAIRDASDSRLEGICEEKQMELVL 592
A+R + E I M+ VL
Sbjct: 240 --ALRPSDRPTFEEIQNHPWMQDVL 262
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 109/229 (47%), Gaps = 27/229 (11%)
Query: 347 FKDKDVIGRGGFGKVYRGVLAS-----NVQIAVKKVSH-DSKQGIKEFVAELVSMGRLRH 400
FK V+G G FG VY+G+ + +A+K++ S + KE + E M + +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHT---NI--KPCLNWYQRFRIIRGVASG 455
++ +L G C L+ MP G L + NI + LNW + +A G
Sbjct: 84 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 136
Query: 456 LLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLY---DHDTIPQTTKLVGTFG 512
+ YL + + ++HRD+ NVL+ + K+ DFG A+L + + + K+ +
Sbjct: 137 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 513 YMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVD 560
++ L R + +DV+++GV + E+ + G +P + + E ++++
Sbjct: 194 ALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 240
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 19/207 (9%)
Query: 347 FKDKDVIGRGGFGKVYRGVLASNVQI----AVKKVSHDSKQGIKEFVAELVSMGRLRHRN 402
F+ +G G FG+V +L +++ A+K + +K+ L L+ N
Sbjct: 44 FERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 403 ---LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYL 459
LVKL + +V +Y+P G + L I + RF + V + YL
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFXEPHARFYAAQIVLT-FEYL 158
Query: 460 HEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELM 519
H +++RD+KP N+L+D ++ DFG A+ +T L GT Y+ PE++
Sbjct: 159 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEII 211
Query: 520 RTGKASTSTDVYAFGVFMLEVASGRRP 546
+ + + D +A GV + E+A+G P
Sbjct: 212 LSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 109/229 (47%), Gaps = 27/229 (11%)
Query: 347 FKDKDVIGRGGFGKVYRGVLAS-----NVQIAVKKVSH-DSKQGIKEFVAELVSMGRLRH 400
FK V+G G FG VY+G+ + +A+ ++ S + KE + E M + +
Sbjct: 51 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDN 110
Query: 401 RNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHT---NI--KPCLNWYQRFRIIRGVASG 455
++ +L G C L+ MP G L + NI + LNW + +A G
Sbjct: 111 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKG 163
Query: 456 LLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLY---DHDTIPQTTKLVGTFG 512
+ YL + + ++HRD+ NVL+ + K+ DFGLA+L + + + K+ +
Sbjct: 164 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 220
Query: 513 YMDPELMRTGKASTSTDVYAFGVFMLEVAS-GRRPVEQQGSMETVNLVD 560
++ L R + +DV+++GV + E+ + G +P + + E ++++
Sbjct: 221 ALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE 267
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 92/202 (45%), Gaps = 16/202 (7%)
Query: 353 IGRGGFG--KVYRGVLASNVQIAVKKVSHDSKQGIKEFVA-ELVSMGRLRHRNLVKLRGY 409
IG G FG ++ R SN +AVK + K I E V E+++ LRH N+V+ +
Sbjct: 26 IGSGNFGVARLMRDK-QSNELVAVKYIERGEK--IDENVKREIINHRSLRHPNIVRFKEV 82
Query: 410 CRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLH 469
+V +Y G L + + N RF + + SG+ Y H V H
Sbjct: 83 ILTPTHLAIVMEYASGGELFERI-CNAGRFSEDEARF-FFQQLISGVSYCH---AMQVCH 137
Query: 470 RDIKPANVLLDADLNGKLG--DFGLARLYDHDTIPQTTKLVGTFGYMDPE-LMRTGKAST 526
RD+K N LLD +L DFG ++ + P++T VGT Y+ PE L++
Sbjct: 138 RDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLLKKEYDGK 195
Query: 527 STDVYAFGVFMLEVASGRRPVE 548
DV++ GV + + G P E
Sbjct: 196 VADVWSCGVTLYVMLVGAYPFE 217
>pdb|2ZBJ|A Chain A, Crystal Structure Of Dioclea Rostrata Lectin
Length = 237
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 64/124 (51%), Gaps = 16/124 (12%)
Query: 133 ILAIELDTVQNLDFDDIDDNHVGIDVNSLISHESAPAAYFSDREGMNKTLELIIGDPIQI 192
I+A+ELD+ N D D + H+GID+ S+ S +A R M G +
Sbjct: 4 IVAVELDSYPNTDIGDPNYPHIGIDIKSIRSKSTA-------RWNMQT------GKVGTV 50
Query: 193 WISYDGAEKLLNVTLAPMSIPKPTKPLLSRAINLSHILLETMYVGFSASTGSLKSSHYVL 252
ISY+ K L+ A +S + +S ++L+++L E + VG SA+TG K ++ +L
Sbjct: 51 HISYNSVAKRLS---AVVSYTGSSSTTVSYDVDLNNVLPEWVRVGLSATTGLYKETNTIL 107
Query: 253 GWSF 256
WSF
Sbjct: 108 SWSF 111
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 107/265 (40%), Gaps = 37/265 (13%)
Query: 352 VIGRGGFGKVYRGVLAS-NVQIAVKKVSHDSKQGIKEFV------AELVSMGRLRH--RN 402
++G GGFG VY G+ S N+ +A+K V D E E+V + ++
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHED 462
+++L + R F+L+ + P D + L V + + H
Sbjct: 91 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN- 148
Query: 463 WEQVVLHRDIKPANVLLDADLNG-KLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRT 521
VLHRDIK N+L+D + KL DFG L DT+ T GT Y PE +R
Sbjct: 149 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTV--YTDFDGTRVYSPPEWIRY 203
Query: 522 GK-ASTSTDVYAFGVFMLEVASGRRPVE-------------QQGSMETVNLVDWVCDCWK 567
+ S V++ G+ + ++ G P E Q+ S E +L+ W
Sbjct: 204 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCL---- 259
Query: 568 KGAIRDASDSRLEGICEEKQMELVL 592
A+R + E I M+ VL
Sbjct: 260 --ALRPSDRPTFEEIQNHPWMQDVL 282
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 95/212 (44%), Gaps = 21/212 (9%)
Query: 353 IGRGGFGKVYRGVLASNVQI-AVKKVSHDS--KQGIKEFVAELVSMGRLRHRNLVKLRGY 409
IG GG KV++ VL QI A+K V+ + Q + + E+ + +L+ + +R Y
Sbjct: 20 IGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 78
Query: 410 CRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLH 469
+ +Y M G++D K ++ ++R + + + +H+ ++H
Sbjct: 79 DYEITD-QYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ---HGIVH 134
Query: 470 RDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTT-KLVGTFGYMDPELMRTGKASTST 528
D+KPAN L+ D KL DFG+A DT VGT YM PE ++ +S
Sbjct: 135 SDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSREN 193
Query: 529 -----------DVYAFGVFMLEVASGRRPVEQ 549
DV++ G + + G+ P +Q
Sbjct: 194 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 225
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 107/265 (40%), Gaps = 37/265 (13%)
Query: 352 VIGRGGFGKVYRGVLAS-NVQIAVKKVSHDSKQGIKEFV------AELVSMGRLRH--RN 402
++G GGFG VY G+ S N+ +A+K V D E E+V + ++
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHED 462
+++L + R F+L+ + P D + L V + + H
Sbjct: 118 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN- 175
Query: 463 WEQVVLHRDIKPANVLLDADLNG-KLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRT 521
VLHRDIK N+L+D + KL DFG L DT+ T GT Y PE +R
Sbjct: 176 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTV--YTDFDGTRVYSPPEWIRY 230
Query: 522 GK-ASTSTDVYAFGVFMLEVASGRRPVE-------------QQGSMETVNLVDWVCDCWK 567
+ S V++ G+ + ++ G P E Q+ S E +L+ W
Sbjct: 231 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCL---- 286
Query: 568 KGAIRDASDSRLEGICEEKQMELVL 592
A+R + E I M+ VL
Sbjct: 287 --ALRPSDRPTFEEIQNHPWMQDVL 309
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 107/265 (40%), Gaps = 37/265 (13%)
Query: 352 VIGRGGFGKVYRGVLAS-NVQIAVKKVSHDSKQGIKEFV------AELVSMGRLRH--RN 402
++G GGFG VY G+ S N+ +A+K V D E E+V + ++
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHED 462
+++L + R F+L+ + P D + L V + + H
Sbjct: 104 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN- 161
Query: 463 WEQVVLHRDIKPANVLLDADLNG-KLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRT 521
VLHRDIK N+L+D + KL DFG L DT+ T GT Y PE +R
Sbjct: 162 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTV--YTDFDGTRVYSPPEWIRY 216
Query: 522 GK-ASTSTDVYAFGVFMLEVASGRRPVE-------------QQGSMETVNLVDWVCDCWK 567
+ S V++ G+ + ++ G P E Q+ S E +L+ W
Sbjct: 217 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXECQHLIRWCL---- 272
Query: 568 KGAIRDASDSRLEGICEEKQMELVL 592
A+R + E I M+ VL
Sbjct: 273 --ALRPSDRPTFEEIQNHPWMQDVL 295
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 111/275 (40%), Gaps = 57/275 (20%)
Query: 352 VIGRGGFGKVYRGVLAS-NVQIAVKKVSHDSKQGIKEFV------AELVSMGRLRH--RN 402
++G GGFG VY G+ S N+ +A+K V D E E+V + ++
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHED 462
+++L + R F+L+ + M +P + + F RG L
Sbjct: 75 VIRLLDWFERPDSFVLILERM-------------EPVQDLFD-FITERGALQEELARSFF 120
Query: 463 WEQV----------VLHRDIKPANVLLDADLNG-KLGDFGLARLYDHDTIPQTTKLVGTF 511
W+ + VLHRDIK N+L+D + KL DFG L DT+ T GT
Sbjct: 121 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTV--YTDFDGTR 177
Query: 512 GYMDPELMRTGK-ASTSTDVYAFGVFMLEVASGRRPVE-------------QQGSMETVN 557
Y PE +R + S V++ G+ + ++ G P E Q+ S E +
Sbjct: 178 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQH 237
Query: 558 LVDWVCDCWKKGAIRDASDSRLEGICEEKQMELVL 592
L+ W A+R + E I M+ VL
Sbjct: 238 LIRWCL------ALRPSDRPTFEEIQNHPWMQDVL 266
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 19/207 (9%)
Query: 347 FKDKDVIGRGGFGKVYRGVLASNVQI----AVKKVSHDSKQGIKEFVAELVSMGRLRHRN 402
F+ +G G FG+V +L +++ A+K + +K+ L L+ N
Sbjct: 43 FERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 403 ---LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYL 459
LVKL + +V +Y+P G + L I + RF + V + YL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFXEPHARFYAAQIVLT-FEYL 157
Query: 460 HEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELM 519
H +++RD+KP N+L+D ++ DFG A+ +T L GT Y+ PE++
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEII 210
Query: 520 RTGKASTSTDVYAFGVFMLEVASGRRP 546
+ + + D +A GV + E+A+G P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 107/265 (40%), Gaps = 37/265 (13%)
Query: 352 VIGRGGFGKVYRGVLAS-NVQIAVKKVSHDSKQGIKEFV------AELVSMGRLRH--RN 402
++G GGFG VY G+ S N+ +A+K V D E E+V + ++
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHED 462
+++L + R F+L+ + P D + L V + + H
Sbjct: 103 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN- 160
Query: 463 WEQVVLHRDIKPANVLLDADLNG-KLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRT 521
VLHRDIK N+L+D + KL DFG L DT+ T GT Y PE +R
Sbjct: 161 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTV--YTDFDGTRVYSPPEWIRY 215
Query: 522 GK-ASTSTDVYAFGVFMLEVASGRRPVE-------------QQGSMETVNLVDWVCDCWK 567
+ S V++ G+ + ++ G P E Q+ S E +L+ W
Sbjct: 216 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXECQHLIRWCL---- 271
Query: 568 KGAIRDASDSRLEGICEEKQMELVL 592
A+R + E I M+ VL
Sbjct: 272 --ALRPSDRPTFEEIQNHPWMQDVL 294
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 19/207 (9%)
Query: 347 FKDKDVIGRGGFGKVYRGVLASNVQI----AVKKVSHDSKQGIKEFVAELVSMGRLRHRN 402
F+ +G G FG+V +L +++ A+K + +K+ L L+ N
Sbjct: 43 FERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 403 ---LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYL 459
LVKL + +V +Y+P G + L I + RF + V + YL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFXEPHARFYAAQIVLT-FEYL 157
Query: 460 HEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELM 519
H +++RD+KP N+L+D ++ DFG A+ +T L GT Y+ PE++
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEII 210
Query: 520 RTGKASTSTDVYAFGVFMLEVASGRRP 546
+ + + D +A GV + E+A+G P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 94/207 (45%), Gaps = 19/207 (9%)
Query: 347 FKDKDVIGRGGFGKVYRGVLASNVQI----AVKKVSHDSKQGIKEFVAELVSMGRLRHRN 402
F+ +G G FG+V +L +++ A+K + +K+ L L+ N
Sbjct: 43 FERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 403 ---LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYL 459
LVKL + +V +Y P G + L I + RF + V + YL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR-RIGRFXEPHARFYAAQIVLT-FEYL 157
Query: 460 HEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELM 519
H +++RD+KP N+++D K+ DFG A+ +T L GT Y+ PE++
Sbjct: 158 HS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAPEII 210
Query: 520 RTGKASTSTDVYAFGVFMLEVASGRRP 546
+ + + D +A GV + E+A+G P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 108/265 (40%), Gaps = 37/265 (13%)
Query: 352 VIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGIKEFV------AELVSMGRLRH--RN 402
++G GGFG VY G+ ++ N+ +A+K V D E E+V + ++
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHED 462
+++L + R F+L+ + P D + L V + + H
Sbjct: 90 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN- 147
Query: 463 WEQVVLHRDIKPANVLLDADLNG-KLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRT 521
VLHRDIK N+L+D + KL DFG L DT+ T GT Y PE +R
Sbjct: 148 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTV--YTDFDGTRVYSPPEWIRY 202
Query: 522 GK-ASTSTDVYAFGVFMLEVASGRRPVE-------------QQGSMETVNLVDWVCDCWK 567
+ S V++ G+ + ++ G P E Q+ S E +L+ W
Sbjct: 203 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCL---- 258
Query: 568 KGAIRDASDSRLEGICEEKQMELVL 592
A+R + E I M+ VL
Sbjct: 259 --ALRPSDRPTFEEIQNHPWMQDVL 281
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 95/212 (44%), Gaps = 21/212 (9%)
Query: 353 IGRGGFGKVYRGVLASNVQI-AVKKVSHDS--KQGIKEFVAELVSMGRLRHRNLVKLRGY 409
IG GG KV++ VL QI A+K V+ + Q + + E+ + +L+ + +R Y
Sbjct: 64 IGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 122
Query: 410 CRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLH 469
+ +Y M G++D K ++ ++R + + + +H+ ++H
Sbjct: 123 DYEITD-QYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ---HGIVH 178
Query: 470 RDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTT-KLVGTFGYMDPELMRTGKASTST 528
D+KPAN L+ D KL DFG+A DT VGT YM PE ++ +S
Sbjct: 179 SDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSREN 237
Query: 529 -----------DVYAFGVFMLEVASGRRPVEQ 549
DV++ G + + G+ P +Q
Sbjct: 238 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 269
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 107/265 (40%), Gaps = 37/265 (13%)
Query: 352 VIGRGGFGKVYRGVLAS-NVQIAVKKVSHDSKQGIKEFV------AELVSMGRLRH--RN 402
++G GGFG VY G+ S N+ +A+K V D E E+V + ++
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHED 462
+++L + R F+L+ + P D + L V + + H
Sbjct: 103 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN- 160
Query: 463 WEQVVLHRDIKPANVLLDADLNG-KLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRT 521
VLHRDIK N+L+D + KL DFG L DT+ T GT Y PE +R
Sbjct: 161 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTV--YTDFDGTRVYSPPEWIRY 215
Query: 522 GK-ASTSTDVYAFGVFMLEVASGRRPVE-------------QQGSMETVNLVDWVCDCWK 567
+ S V++ G+ + ++ G P E Q+ S E +L+ W
Sbjct: 216 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHLIRWCL---- 271
Query: 568 KGAIRDASDSRLEGICEEKQMELVL 592
A+R + E I M+ VL
Sbjct: 272 --ALRPSDRPTFEEIQNHPWMQDVL 294
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 95/212 (44%), Gaps = 21/212 (9%)
Query: 353 IGRGGFGKVYRGVLASNVQI-AVKKVSHDS--KQGIKEFVAELVSMGRLRHRNLVKLRGY 409
IG GG KV++ VL QI A+K V+ + Q + + E+ + +L+ + +R Y
Sbjct: 17 IGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 75
Query: 410 CRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLH 469
+ +Y M G++D K ++ ++R + + + +H+ ++H
Sbjct: 76 DYEITD-QYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ---HGIVH 131
Query: 470 RDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTT-KLVGTFGYMDPELMRTGKASTST 528
D+KPAN L+ D KL DFG+A DT VGT YM PE ++ +S
Sbjct: 132 SDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSREN 190
Query: 529 -----------DVYAFGVFMLEVASGRRPVEQ 549
DV++ G + + G+ P +Q
Sbjct: 191 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 222
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 107/265 (40%), Gaps = 37/265 (13%)
Query: 352 VIGRGGFGKVYRGVLAS-NVQIAVKKVSHDSKQGIKEFV------AELVSMGRLRH--RN 402
++G GGFG VY G+ S N+ +A+K V D E E+V + ++
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHED 462
+++L + R F+L+ + P D + L V + + H
Sbjct: 76 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN- 133
Query: 463 WEQVVLHRDIKPANVLLDADLNG-KLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRT 521
VLHRDIK N+L+D + KL DFG L DT+ T GT Y PE +R
Sbjct: 134 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTV--YTDFDGTRVYSPPEWIRY 188
Query: 522 GK-ASTSTDVYAFGVFMLEVASGRRPVE-------------QQGSMETVNLVDWVCDCWK 567
+ S V++ G+ + ++ G P E Q+ S E +L+ W
Sbjct: 189 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCL---- 244
Query: 568 KGAIRDASDSRLEGICEEKQMELVL 592
A+R + E I M+ VL
Sbjct: 245 --ALRPSDRPTFEEIQNHPWMQDVL 267
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 107/265 (40%), Gaps = 37/265 (13%)
Query: 352 VIGRGGFGKVYRGVLAS-NVQIAVKKVSHDSKQGIKEFV------AELVSMGRLRH--RN 402
++G GGFG VY G+ S N+ +A+K V D E E+V + ++
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHED 462
+++L + R F+L+ + P D + L V + + H
Sbjct: 104 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN- 161
Query: 463 WEQVVLHRDIKPANVLLDADLNG-KLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRT 521
VLHRDIK N+L+D + KL DFG L DT+ T GT Y PE +R
Sbjct: 162 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTV--YTDFDGTRVYSPPEWIRY 216
Query: 522 GK-ASTSTDVYAFGVFMLEVASGRRPVE-------------QQGSMETVNLVDWVCDCWK 567
+ S V++ G+ + ++ G P E Q+ S E +L+ W
Sbjct: 217 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHLIRWCL---- 272
Query: 568 KGAIRDASDSRLEGICEEKQMELVL 592
A+R + E I M+ VL
Sbjct: 273 --ALRPSDRPTFEEIQNHPWMQDVL 295
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 107/265 (40%), Gaps = 37/265 (13%)
Query: 352 VIGRGGFGKVYRGVLAS-NVQIAVKKVSHDSKQGIKEFV------AELVSMGRLRH--RN 402
++G GGFG VY G+ S N+ +A+K V D E E+V + ++
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHED 462
+++L + R F+L+ + P D + L V + + H
Sbjct: 118 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN- 175
Query: 463 WEQVVLHRDIKPANVLLDADLNG-KLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRT 521
VLHRDIK N+L+D + KL DFG L DT+ T GT Y PE +R
Sbjct: 176 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTV--YTDFDGTRVYSPPEWIRY 230
Query: 522 GK-ASTSTDVYAFGVFMLEVASGRRPVE-------------QQGSMETVNLVDWVCDCWK 567
+ S V++ G+ + ++ G P E Q+ S E +L+ W
Sbjct: 231 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCL---- 286
Query: 568 KGAIRDASDSRLEGICEEKQMELVL 592
A+R + E I M+ VL
Sbjct: 287 --ALRPSDRPTFEEIQNHPWMQDVL 309
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 107/265 (40%), Gaps = 37/265 (13%)
Query: 352 VIGRGGFGKVYRGVLAS-NVQIAVKKVSHDSKQGIKEFV------AELVSMGRLRH--RN 402
++G GGFG VY G+ S N+ +A+K V D E E+V + ++
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHED 462
+++L + R F+L+ + P D + L V + + H
Sbjct: 104 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN- 161
Query: 463 WEQVVLHRDIKPANVLLDADLNG-KLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRT 521
VLHRDIK N+L+D + KL DFG L DT+ T GT Y PE +R
Sbjct: 162 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTV--YTDFDGTRVYSPPEWIRY 216
Query: 522 GK-ASTSTDVYAFGVFMLEVASGRRPVE-------------QQGSMETVNLVDWVCDCWK 567
+ S V++ G+ + ++ G P E Q+ S E +L+ W
Sbjct: 217 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHLIRWCL---- 272
Query: 568 KGAIRDASDSRLEGICEEKQMELVL 592
A+R + E I M+ VL
Sbjct: 273 --ALRPSDRPTFEEIQNHPWMQDVL 295
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%)
Query: 469 HRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTST 528
HRD+KP N+L+ AD L DFG+A + + Q VGT Y PE A+
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRA 216
Query: 529 DVYAFGVFMLEVASGRRPVE 548
D+YA + E +G P +
Sbjct: 217 DIYALTCVLYECLTGSPPYQ 236
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 107/265 (40%), Gaps = 37/265 (13%)
Query: 352 VIGRGGFGKVYRGVLAS-NVQIAVKKVSHDSKQGIKEFV------AELVSMGRLRH--RN 402
++G GGFG VY G+ S N+ +A+K V D E E+V + ++
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHED 462
+++L + R F+L+ + P D + L V + + H
Sbjct: 103 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN- 160
Query: 463 WEQVVLHRDIKPANVLLDADLNG-KLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRT 521
VLHRDIK N+L+D + KL DFG L DT+ T GT Y PE +R
Sbjct: 161 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTV--YTDFDGTRVYSPPEWIRY 215
Query: 522 GK-ASTSTDVYAFGVFMLEVASGRRPVE-------------QQGSMETVNLVDWVCDCWK 567
+ S V++ G+ + ++ G P E Q+ S E +L+ W
Sbjct: 216 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHLIRWCL---- 271
Query: 568 KGAIRDASDSRLEGICEEKQMELVL 592
A+R + E I M+ VL
Sbjct: 272 --ALRPSDRPTFEEIQNHPWMQDVL 294
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 95/212 (44%), Gaps = 21/212 (9%)
Query: 353 IGRGGFGKVYRGVLASNVQI-AVKKVSHDS--KQGIKEFVAELVSMGRLRHRNLVKLRGY 409
IG GG KV++ VL QI A+K V+ + Q + + E+ + +L+ + +R Y
Sbjct: 16 IGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 74
Query: 410 CRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLH 469
+ +Y M G++D K ++ ++R + + + +H+ ++H
Sbjct: 75 DYEITD-QYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ---HGIVH 130
Query: 470 RDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTT-KLVGTFGYMDPELMRTGKASTST 528
D+KPAN L+ D KL DFG+A DT VGT YM PE ++ +S
Sbjct: 131 SDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSREN 189
Query: 529 -----------DVYAFGVFMLEVASGRRPVEQ 549
DV++ G + + G+ P +Q
Sbjct: 190 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 221
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 107/265 (40%), Gaps = 37/265 (13%)
Query: 352 VIGRGGFGKVYRGVLAS-NVQIAVKKVSHDSKQGIKEFV------AELVSMGRLRH--RN 402
++G GGFG VY G+ S N+ +A+K V D E E+V + ++
Sbjct: 38 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 97
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHED 462
+++L + R F+L+ + P D + L V + + H
Sbjct: 98 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN- 155
Query: 463 WEQVVLHRDIKPANVLLDADLNG-KLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRT 521
VLHRDIK N+L+D + KL DFG L DT+ T GT Y PE +R
Sbjct: 156 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTV--YTDFDGTRVYSPPEWIRY 210
Query: 522 GK-ASTSTDVYAFGVFMLEVASGRRPVE-------------QQGSMETVNLVDWVCDCWK 567
+ S V++ G+ + ++ G P E Q+ S E +L+ W
Sbjct: 211 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCL---- 266
Query: 568 KGAIRDASDSRLEGICEEKQMELVL 592
A+R + E I M+ VL
Sbjct: 267 --ALRPSDRPTFEEIQNHPWMQDVL 289
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 19/207 (9%)
Query: 347 FKDKDVIGRGGFGKVYRGVLASNVQI----AVKKVSHDSKQGIKEFVAELVSMGRLRHRN 402
F+ +G G FG+V +L +++ A+K + +K+ L L+ N
Sbjct: 44 FERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 403 ---LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYL 459
LVKL + +V +Y+P G + L I + RF + V + YL
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAAQIVLT-FEYL 158
Query: 460 HEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELM 519
H +++RD+KP N+L+D ++ DFG A+ +T L GT Y+ PE++
Sbjct: 159 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWTLCGTPEYLAPEII 211
Query: 520 RTGKASTSTDVYAFGVFMLEVASGRRP 546
+ + + D +A GV + E+A+G P
Sbjct: 212 LSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 92/202 (45%), Gaps = 16/202 (7%)
Query: 353 IGRGGFG--KVYRGVLASNVQIAVKKVSHDSKQGIKEFVA-ELVSMGRLRHRNLVKLRGY 409
IG G FG ++ R L + +AVK + + I E V E+++ LRH N+V+ +
Sbjct: 28 IGSGNFGVARLMRDKLTKEL-VAVKYIERGA--AIDENVQREIINHRSLRHPNIVRFKEV 84
Query: 410 CRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLH 469
++ +Y G L + + N RF + + SG+ Y H + H
Sbjct: 85 ILTPTHLAIIMEYASGGELYERI-CNAGRFSEDEARF-FFQQLLSGVSYCH---SMQICH 139
Query: 470 RDIKPANVLLDADLNGKLG--DFGLARLYDHDTIPQTTKLVGTFGYMDPE-LMRTGKAST 526
RD+K N LLD +L DFG ++ + P++T VGT Y+ PE L+R
Sbjct: 140 RDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST--VGTPAYIAPEVLLRQEYDGK 197
Query: 527 STDVYAFGVFMLEVASGRRPVE 548
DV++ GV + + G P E
Sbjct: 198 IADVWSCGVTLYVMLVGAYPFE 219
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 107/265 (40%), Gaps = 37/265 (13%)
Query: 352 VIGRGGFGKVYRGVLAS-NVQIAVKKVSHDSKQGIKEFV------AELVSMGRLRH--RN 402
++G GGFG VY G+ S N+ +A+K V D E E+V + ++
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHED 462
+++L + R F+L+ + P D + L V + + H
Sbjct: 91 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN- 148
Query: 463 WEQVVLHRDIKPANVLLDADLNG-KLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRT 521
VLHRDIK N+L+D + KL DFG L DT+ T GT Y PE +R
Sbjct: 149 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTV--YTDFDGTRVYSPPEWIRY 203
Query: 522 GK-ASTSTDVYAFGVFMLEVASGRRPVE-------------QQGSMETVNLVDWVCDCWK 567
+ S V++ G+ + ++ G P E Q+ S E +L+ W
Sbjct: 204 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCL---- 259
Query: 568 KGAIRDASDSRLEGICEEKQMELVL 592
A+R + E I M+ VL
Sbjct: 260 --ALRPSDRPTFEEIQNHPWMQDVL 282
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 107/265 (40%), Gaps = 37/265 (13%)
Query: 352 VIGRGGFGKVYRGVLAS-NVQIAVKKVSHDSKQGIKEFV------AELVSMGRLRH--RN 402
++G GGFG VY G+ S N+ +A+K V D E E+V + ++
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHED 462
+++L + R F+L+ + P D + L V + + H
Sbjct: 103 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN- 160
Query: 463 WEQVVLHRDIKPANVLLDADLNG-KLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRT 521
VLHRDIK N+L+D + KL DFG L DT+ T GT Y PE +R
Sbjct: 161 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTV--YTDFDGTRVYSPPEWIRY 215
Query: 522 GK-ASTSTDVYAFGVFMLEVASGRRPVE-------------QQGSMETVNLVDWVCDCWK 567
+ S V++ G+ + ++ G P E Q+ S E +L+ W
Sbjct: 216 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCL---- 271
Query: 568 KGAIRDASDSRLEGICEEKQMELVL 592
A+R + E I M+ VL
Sbjct: 272 --ALRPSDRPTFEEIQNHPWMQDVL 294
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 107/265 (40%), Gaps = 37/265 (13%)
Query: 352 VIGRGGFGKVYRGVLAS-NVQIAVKKVSHDSKQGIKEFV------AELVSMGRLRH--RN 402
++G GGFG VY G+ S N+ +A+K V D E E+V + ++
Sbjct: 63 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 122
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHED 462
+++L + R F+L+ + P D + L V + + H
Sbjct: 123 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN- 180
Query: 463 WEQVVLHRDIKPANVLLDADLNG-KLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRT 521
VLHRDIK N+L+D + KL DFG L DT+ T GT Y PE +R
Sbjct: 181 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTV--YTDFDGTRVYSPPEWIRY 235
Query: 522 GK-ASTSTDVYAFGVFMLEVASGRRPVE-------------QQGSMETVNLVDWVCDCWK 567
+ S V++ G+ + ++ G P E Q+ S E +L+ W
Sbjct: 236 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCL---- 291
Query: 568 KGAIRDASDSRLEGICEEKQMELVL 592
A+R + E I M+ VL
Sbjct: 292 --ALRPSDRPTFEEIQNHPWMQDVL 314
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 70/144 (48%), Gaps = 9/144 (6%)
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHED 462
LVKL + +V +Y+P G + L I + RF + V + YLH
Sbjct: 96 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFXEPHARFYAAQIVLT-FEYLHS- 152
Query: 463 WEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTG 522
+++RD+KP N+L+D ++ DFG A+ +T L GT Y+ PE++ +
Sbjct: 153 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSK 206
Query: 523 KASTSTDVYAFGVFMLEVASGRRP 546
+ + D +A GV + E+A+G P
Sbjct: 207 GYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 107/265 (40%), Gaps = 37/265 (13%)
Query: 352 VIGRGGFGKVYRGVLAS-NVQIAVKKVSHDSKQGIKEFV------AELVSMGRLRH--RN 402
++G GGFG VY G+ S N+ +A+K V D E E+V + ++
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHED 462
+++L + R F+L+ + P D + L V + + H
Sbjct: 76 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN- 133
Query: 463 WEQVVLHRDIKPANVLLDADLNG-KLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRT 521
VLHRDIK N+L+D + KL DFG L DT+ T GT Y PE +R
Sbjct: 134 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTV--YTDFDGTRVYSPPEWIRY 188
Query: 522 GK-ASTSTDVYAFGVFMLEVASGRRPVE-------------QQGSMETVNLVDWVCDCWK 567
+ S V++ G+ + ++ G P E Q+ S E +L+ W
Sbjct: 189 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCL---- 244
Query: 568 KGAIRDASDSRLEGICEEKQMELVL 592
A+R + E I M+ VL
Sbjct: 245 --ALRPSDRPTFEEIQNHPWMQDVL 267
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 19/207 (9%)
Query: 347 FKDKDVIGRGGFGKVYRGVLASNVQI----AVKKVSHDSKQGIKEFVAELVSMGRLRHRN 402
F+ +G G FG+V +L +++ A+K + +K+ L L+ N
Sbjct: 29 FERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 85
Query: 403 ---LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYL 459
LVKL + +V +Y+P G + L I + RF + V + YL
Sbjct: 86 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAAQIVLT-FEYL 143
Query: 460 HEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELM 519
H +++RD+KP N+L+D ++ DFG A+ +T L GT Y+ PE++
Sbjct: 144 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWTLCGTPEYLAPEII 196
Query: 520 RTGKASTSTDVYAFGVFMLEVASGRRP 546
+ + + D +A GV + E+A+G P
Sbjct: 197 LSKGYNKAVDWWALGVLIYEMAAGYPP 223
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 19/207 (9%)
Query: 347 FKDKDVIGRGGFGKVYRGVLASNVQI----AVKKVSHDSKQGIKEFVAELVSMGRLRHRN 402
F+ +G G FG+V +L +++ A+K + +K+ L L+ N
Sbjct: 43 FERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 403 ---LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYL 459
LVKL + +V +Y+P G + L I + RF + V + YL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAAQIVLT-FEYL 157
Query: 460 HEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELM 519
H +++RD+KP N+L+D ++ DFG A+ +T L GT Y+ PE++
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEII 210
Query: 520 RTGKASTSTDVYAFGVFMLEVASGRRP 546
+ + + D +A GV + E+A+G P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 107/265 (40%), Gaps = 37/265 (13%)
Query: 352 VIGRGGFGKVYRGVLAS-NVQIAVKKVSHDSKQGIKEFV------AELVSMGRLRH--RN 402
++G GGFG VY G+ S N+ +A+K V D E E+V + ++
Sbjct: 50 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 109
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHED 462
+++L + R F+L+ + P D + L V + + H
Sbjct: 110 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN- 167
Query: 463 WEQVVLHRDIKPANVLLDADLNG-KLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRT 521
VLHRDIK N+L+D + KL DFG L DT+ T GT Y PE +R
Sbjct: 168 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTV--YTDFDGTRVYSPPEWIRY 222
Query: 522 GK-ASTSTDVYAFGVFMLEVASGRRPVE-------------QQGSMETVNLVDWVCDCWK 567
+ S V++ G+ + ++ G P E Q+ S E +L+ W
Sbjct: 223 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCL---- 278
Query: 568 KGAIRDASDSRLEGICEEKQMELVL 592
A+R + E I M+ VL
Sbjct: 279 --ALRPSDRPTFEEIQNHPWMQDVL 301
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 107/265 (40%), Gaps = 37/265 (13%)
Query: 352 VIGRGGFGKVYRGVLAS-NVQIAVKKVSHDSKQGIKEFV------AELVSMGRLRH--RN 402
++G GGFG VY G+ S N+ +A+K V D E E+V + ++
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHED 462
+++L + R F+L+ + P D + L V + + H
Sbjct: 76 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN- 133
Query: 463 WEQVVLHRDIKPANVLLDADLNG-KLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRT 521
VLHRDIK N+L+D + KL DFG L DT+ T GT Y PE +R
Sbjct: 134 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTV--YTDFDGTRVYSPPEWIRY 188
Query: 522 GK-ASTSTDVYAFGVFMLEVASGRRPVE-------------QQGSMETVNLVDWVCDCWK 567
+ S V++ G+ + ++ G P E Q+ S E +L+ W
Sbjct: 189 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCL---- 244
Query: 568 KGAIRDASDSRLEGICEEKQMELVL 592
A+R + E I M+ VL
Sbjct: 245 --ALRPSDRPTFEEIQNHPWMQDVL 267
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 19/207 (9%)
Query: 347 FKDKDVIGRGGFGKVYRGVLASNVQI----AVKKVSHDSKQGIKEFVAELVSMGRLRHRN 402
F+ +G G FG+V +L +++ A+K + +K+ L L+ N
Sbjct: 43 FERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 403 ---LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYL 459
LVKL + +V +Y+P G + L I + RF + V + YL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAAQIVLT-FEYL 157
Query: 460 HEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELM 519
H +++RD+KP N+L+D ++ DFG A+ +T L GT Y+ PE++
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEII 210
Query: 520 RTGKASTSTDVYAFGVFMLEVASGRRP 546
+ + + D +A GV + E+A+G P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 56/106 (52%), Gaps = 11/106 (10%)
Query: 447 RIIRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLA-RLYDHDTIPQTT 505
++ + L YL E + V+HRD+KP+N+LLD KL DFG++ RL D ++
Sbjct: 128 KMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRS- 184
Query: 506 KLVGTFGYMDPELMRTGKASTS-----TDVYAFGVFMLEVASGRRP 546
G YM PE + + DV++ G+ ++E+A+G+ P
Sbjct: 185 --AGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 19/207 (9%)
Query: 347 FKDKDVIGRGGFGKVYRGVLASNVQI----AVKKVSHDSKQGIKEFVAELVSMGRLRHRN 402
F+ +G G FG+V +L +++ A+K + +K+ L L+ N
Sbjct: 44 FERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 403 ---LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYL 459
LVKL + +V +Y+P G + L I + RF + V + YL
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAAQIVLT-FEYL 158
Query: 460 HEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELM 519
H +++RD+KP N+L+D ++ DFG A+ +T L GT Y+ PE++
Sbjct: 159 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEII 211
Query: 520 RTGKASTSTDVYAFGVFMLEVASGRRP 546
+ + + D +A GV + E+A+G P
Sbjct: 212 LSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 19/207 (9%)
Query: 347 FKDKDVIGRGGFGKVYRGVLASNVQI----AVKKVSHDSKQGIKEFVAELVSMGRLRHRN 402
F+ +G G FG+V +L +++ A+K + +K+ L L+ N
Sbjct: 43 FERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 403 ---LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYL 459
LVKL + +V +Y+P G + L I + RF + V + YL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAAQIVLT-FEYL 157
Query: 460 HEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELM 519
H +++RD+KP N+L+D ++ DFG A+ +T L GT Y+ PE++
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEII 210
Query: 520 RTGKASTSTDVYAFGVFMLEVASGRRP 546
+ + + D +A GV + E+A+G P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 107/265 (40%), Gaps = 37/265 (13%)
Query: 352 VIGRGGFGKVYRGVLAS-NVQIAVKKVSHDSKQGIKEFV------AELVSMGRLRH--RN 402
++G GGFG VY G+ S N+ +A+K V D E E+V + ++
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHED 462
+++L + R F+L+ + P D + L V + + H
Sbjct: 75 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN- 132
Query: 463 WEQVVLHRDIKPANVLLDADLNG-KLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRT 521
VLHRDIK N+L+D + KL DFG L DT+ T GT Y PE +R
Sbjct: 133 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTV--YTDFDGTRVYSPPEWIRY 187
Query: 522 GK-ASTSTDVYAFGVFMLEVASGRRPVE-------------QQGSMETVNLVDWVCDCWK 567
+ S V++ G+ + ++ G P E Q+ S E +L+ W
Sbjct: 188 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCL---- 243
Query: 568 KGAIRDASDSRLEGICEEKQMELVL 592
A+R + E I M+ VL
Sbjct: 244 --ALRPSDRPTFEEIQNHPWMQDVL 266
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 107/248 (43%), Gaps = 52/248 (20%)
Query: 337 YKDLYKATKGFKDKDVIGRGGFGKVYRGVLASNV----QIAVKKV---SHDSKQGIKEFV 389
Y+ + + + FK +D IG G F VY V +IA+K + SH +
Sbjct: 13 YEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIR-----IA 67
Query: 390 AELVSMGRLRHRNLVKLRGYCRRKGEFLLV-YDYMPNGSLDKILHTNIKPCLNWYQRFRI 448
AEL + ++ V YC RK + +++ Y+ + S IL++ L++ +
Sbjct: 68 AELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNS-----LSFQEVREY 122
Query: 449 IRGVASGLLYLHEDWEQVVLHRDIKPANVLLDADLNG-KLGDFGLARLYDHDTIPQTTKL 507
+ + L +H+ ++HRD+KP+N L + L L DFGLA+ HDT + K
Sbjct: 123 MLNLFKALKRIHQFG---IVHRDVKPSNFLYNRRLKKYALVDFGLAQ-GTHDTKIELLKF 178
Query: 508 V----------------------------GTFGYMDPE-LMRTGKASTSTDVYAFGVFML 538
V GT G+ PE L + +T+ D+++ GV L
Sbjct: 179 VQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFL 238
Query: 539 EVASGRRP 546
+ SGR P
Sbjct: 239 SLLSGRYP 246
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 94/207 (45%), Gaps = 19/207 (9%)
Query: 347 FKDKDVIGRGGFGKVYRGVLASNVQI----AVKKVSHDSKQGIKEFVAELVSMGRLRHRN 402
F+ +G G FG+V +L +++ A+K + +K+ L L+ N
Sbjct: 43 FERIKTLGTGSFGRV---MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 403 ---LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYL 459
LVKL + +V +Y P G + L I + RF + V + YL
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR-RIGRFSEPHARFYAAQIVLT-FEYL 157
Query: 460 HEDWEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELM 519
H +++RD+KP N+++D K+ DFG A+ +T L GT Y+ PE++
Sbjct: 158 HS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAPEII 210
Query: 520 RTGKASTSTDVYAFGVFMLEVASGRRP 546
+ + + D +A GV + E+A+G P
Sbjct: 211 LSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 90/207 (43%), Gaps = 15/207 (7%)
Query: 351 DVIGRGGFGKVYRGV-LASNVQIAVK-----KVSHDSKQGIKEFVAELVSMGRLRHRNLV 404
+VIG+G F V R + + Q AVK K + ++ E L+H ++V
Sbjct: 32 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 91
Query: 405 KLRGYCRRKGEFLLVYDYMPNGSL--DKILHTNIKPCLNWYQRFRIIRGVASGLLYLHED 462
+L G +V+++M L + + + + +R + L Y H++
Sbjct: 92 ELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN 151
Query: 463 WEQVVLHRDIKPANVLLDADLNG---KLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELM 519
++HRD+KP VLL + N KLG FG+A + + VGT +M PE++
Sbjct: 152 ---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGR-VGTPHFMAPEVV 207
Query: 520 RTGKASTSTDVYAFGVFMLEVASGRRP 546
+ DV+ GV + + SG P
Sbjct: 208 KREPYGKPVDVWGCGVILFILLSGCLP 234
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 90/207 (43%), Gaps = 15/207 (7%)
Query: 351 DVIGRGGFGKVYRGV-LASNVQIAVK-----KVSHDSKQGIKEFVAELVSMGRLRHRNLV 404
+VIG+G F V R + + Q AVK K + ++ E L+H ++V
Sbjct: 30 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89
Query: 405 KLRGYCRRKGEFLLVYDYMPNGSL--DKILHTNIKPCLNWYQRFRIIRGVASGLLYLHED 462
+L G +V+++M L + + + + +R + L Y H++
Sbjct: 90 ELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN 149
Query: 463 WEQVVLHRDIKPANVLLDADLNG---KLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELM 519
++HRD+KP VLL + N KLG FG+A + + VGT +M PE++
Sbjct: 150 ---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGR-VGTPHFMAPEVV 205
Query: 520 RTGKASTSTDVYAFGVFMLEVASGRRP 546
+ DV+ GV + + SG P
Sbjct: 206 KREPYGKPVDVWGCGVILFILLSGCLP 232
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 103/226 (45%), Gaps = 26/226 (11%)
Query: 337 YKDLYKATKGFKDKDVIGRGGFGKVYRGV-LASNVQIAVKKVSHDSKQGIKEFVAELVSM 395
++D+Y+ +DV+G G +V + L ++ + AVK + E+ +
Sbjct: 10 FEDVYQL-----QEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEML 64
Query: 396 GRLR-HRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVAS 454
+ + HRN+++L + + F LV++ M GS+ + H + + N + +++ VAS
Sbjct: 65 YQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSI--LSHIHKRRHFNELEASVVVQDVAS 122
Query: 455 GLLYLHEDWEQVVLHRDIKPANVLLDADLN---GKLGDFGLARLYDHD------TIPQTT 505
L +LH + + HRD+KP N+L + K+ DF L + + P+
Sbjct: 123 ALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELL 179
Query: 506 KLVGTFGYMDPELMRTGKASTS-----TDVYAFGVFMLEVASGRRP 546
G+ YM PE++ S D+++ GV + + SG P
Sbjct: 180 TPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 106/265 (40%), Gaps = 37/265 (13%)
Query: 352 VIGRGGFGKVYRGVLAS-NVQIAVKKVSHDSKQGIKEFV------AELVSMGRLRH--RN 402
++G GGFG VY G+ S N+ +A+K V D E E+V + ++
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHED 462
+++L + R F+L+ + P D + L V + + H
Sbjct: 91 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN- 148
Query: 463 WEQVVLHRDIKPANVLLDADLNG-KLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRT 521
VLHRDIK N+L+D + KL DFG L DT+ T GT Y PE +R
Sbjct: 149 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTV--YTDFDGTRVYSPPEWIRY 203
Query: 522 GK-ASTSTDVYAFGVFMLEVASGRRPVE-------------QQGSMETVNLVDWVCDCWK 567
+ S V++ G+ + ++ G P E Q+ S E +L+ W
Sbjct: 204 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCL---- 259
Query: 568 KGAIRDASDSRLEGICEEKQMELVL 592
A+R E I M+ VL
Sbjct: 260 --ALRPXDRPTFEEIQNHPWMQDVL 282
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 87/188 (46%), Gaps = 13/188 (6%)
Query: 381 SKQGI--KEFVAELVSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKP 438
S++G+ +E E+ + +RH N++ L K + +L+ + + G L L K
Sbjct: 53 SRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAE--KE 110
Query: 439 CLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDIKPANV-LLDADLNG---KLGDFGLAR 494
L + + ++ + G+ YLH + + H D+KP N+ LLD ++ KL DFG+A
Sbjct: 111 SLTEDEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 167
Query: 495 LYDHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSME 554
+ + + GT ++ PE++ D+++ GV + SG P + E
Sbjct: 168 KIEAGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE 225
Query: 555 TVNLVDWV 562
T+ + V
Sbjct: 226 TLTNISAV 233
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 107/265 (40%), Gaps = 37/265 (13%)
Query: 352 VIGRGGFGKVYRGVLAS-NVQIAVKKVSHDSKQGIKEFV------AELVSMGRLRH--RN 402
++G GGFG VY G+ S N+ +A+K V D E E+V + ++
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHED 462
+++L + R F+L+ + P D + L V + + H
Sbjct: 71 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN- 128
Query: 463 WEQVVLHRDIKPANVLLDADLNG-KLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRT 521
VLHRDIK N+L+D + KL DFG L DT+ T GT Y PE +R
Sbjct: 129 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTV--YTDFDGTRVYSPPEWIRY 183
Query: 522 GK-ASTSTDVYAFGVFMLEVASGRRPVE-------------QQGSMETVNLVDWVCDCWK 567
+ S V++ G+ + ++ G P E Q+ S E +L+ W
Sbjct: 184 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHLIRWCL---- 239
Query: 568 KGAIRDASDSRLEGICEEKQMELVL 592
A+R + E I M+ VL
Sbjct: 240 --ALRPSDRPTFEEIQNHPWMQDVL 262
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 70/144 (48%), Gaps = 9/144 (6%)
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHED 462
LVKL + +V +Y+P G + L I + RF + V + YLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAAQIVLT-FEYLHS- 160
Query: 463 WEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTG 522
+++RD+KP N+L+D ++ DFG A+ +T L GT Y+ PE++ +
Sbjct: 161 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSK 214
Query: 523 KASTSTDVYAFGVFMLEVASGRRP 546
+ + D +A GV + E+A+G P
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 70/144 (48%), Gaps = 9/144 (6%)
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHED 462
LVKL + +V +Y+P G + L I + RF + V + YLH
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAAQIVLT-FEYLHS- 159
Query: 463 WEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTG 522
+++RD+KP N+L+D ++ DFG A+ +T L GT Y+ PE++ +
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSK 213
Query: 523 KASTSTDVYAFGVFMLEVASGRRP 546
+ + D +A GV + E+A+G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 107/265 (40%), Gaps = 37/265 (13%)
Query: 352 VIGRGGFGKVYRGVLAS-NVQIAVKKVSHDSKQGIKEFV------AELVSMGRLRH--RN 402
++G GGFG VY G+ S N+ +A+K V D E E+V + ++
Sbjct: 14 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 73
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHED 462
+++L + R F+L+ + P D + L V + + H
Sbjct: 74 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN- 131
Query: 463 WEQVVLHRDIKPANVLLDADLNG-KLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRT 521
VLHRDIK N+L+D + KL DFG L DT+ T GT Y PE +R
Sbjct: 132 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTV--YTDFDGTRVYSPPEWIRY 186
Query: 522 GK-ASTSTDVYAFGVFMLEVASGRRPVE-------------QQGSMETVNLVDWVCDCWK 567
+ S V++ G+ + ++ G P E Q+ S E +L+ W
Sbjct: 187 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCL---- 242
Query: 568 KGAIRDASDSRLEGICEEKQMELVL 592
A+R + E I M+ VL
Sbjct: 243 --ALRPSDRPTFEEIQNHPWMQDVL 265
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 9/144 (6%)
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHED 462
LVKL + +V +Y P G + L I + RF + V + YLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLR-RIGRFSEPHARFYAAQIVLT-FEYLHS- 160
Query: 463 WEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTG 522
+++RD+KP N+++D K+ DFG A+ +T L GT Y+ PE++ +
Sbjct: 161 --LDLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSK 214
Query: 523 KASTSTDVYAFGVFMLEVASGRRP 546
+ + D +A GV + E+A+G P
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 70/144 (48%), Gaps = 9/144 (6%)
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHED 462
LVKL + +V +Y+P G + L I + RF + V + YLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAAQIVLT-FEYLHS- 160
Query: 463 WEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTG 522
+++RD+KP N+L+D ++ DFG A+ +T L GT Y+ PE++ +
Sbjct: 161 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSK 214
Query: 523 KASTSTDVYAFGVFMLEVASGRRP 546
+ + D +A GV + E+A+G P
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 107/265 (40%), Gaps = 37/265 (13%)
Query: 352 VIGRGGFGKVYRGVLAS-NVQIAVKKVSHDSKQGIKEFV------AELVSMGRLRH--RN 402
++G GGFG VY G+ S N+ +A+K V D E E+V + ++
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHED 462
+++L + R F+L+ + P D + L V + + H
Sbjct: 71 VIRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN- 128
Query: 463 WEQVVLHRDIKPANVLLDADLNG-KLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRT 521
VLHRDIK N+L+D + KL DFG L DT+ T GT Y PE +R
Sbjct: 129 --CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTV--YTDFDGTRVYSPPEWIRY 183
Query: 522 GK-ASTSTDVYAFGVFMLEVASGRRPVE-------------QQGSMETVNLVDWVCDCWK 567
+ S V++ G+ + ++ G P E Q+ S E +L+ W
Sbjct: 184 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCL---- 239
Query: 568 KGAIRDASDSRLEGICEEKQMELVL 592
A+R + E I M+ VL
Sbjct: 240 --ALRPSDRPTFEEIQNHPWMQDVL 262
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 70/144 (48%), Gaps = 9/144 (6%)
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHED 462
LVKL + +V +Y+P G + L I + RF + V + YLH
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAAQIVLT-FEYLHS- 159
Query: 463 WEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTG 522
+++RD+KP N+L+D ++ DFG A+ +T L GT Y+ PE++ +
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSK 213
Query: 523 KASTSTDVYAFGVFMLEVASGRRP 546
+ + D +A GV + E+A+G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 70/144 (48%), Gaps = 9/144 (6%)
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHED 462
LVKL + +V +Y+P G + L I + RF + V + YLH
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAAQIVLT-FEYLHS- 159
Query: 463 WEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTG 522
+++RD+KP N+L+D ++ DFG A+ +T L GT Y+ PE++ +
Sbjct: 160 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSK 213
Query: 523 KASTSTDVYAFGVFMLEVASGRRP 546
+ + D +A GV + E+A+G P
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 92/196 (46%), Gaps = 16/196 (8%)
Query: 375 KKVSHDSKQGI--KEFVAELVSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKIL 432
K+ + S++G+ ++ E+ + ++H N++ L K + +L+ + + G L L
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 433 HTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDIKPANV-LLDADLNG---KLG 488
K L + ++ + +G+ YLH + H D+KP N+ LLD ++ K+
Sbjct: 106 AE--KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKII 160
Query: 489 DFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEVASGRRPV- 547
DFGLA D + + GT ++ PE++ D+++ GV + SG P
Sbjct: 161 DFGLAHKIDFGN--EFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
Query: 548 --EQQGSMETVNLVDW 561
+Q ++ V+ V++
Sbjct: 219 GDTKQETLANVSAVNY 234
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 70/144 (48%), Gaps = 9/144 (6%)
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHED 462
LVKL + +V +Y+P G + L I + RF + V + YLH
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAAQIVLT-FEYLHS- 180
Query: 463 WEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTG 522
+++RD+KP N+L+D ++ DFG A+ +T L GT Y+ PE++ +
Sbjct: 181 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSK 234
Query: 523 KASTSTDVYAFGVFMLEVASGRRP 546
+ + D +A GV + E+A+G P
Sbjct: 235 GYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 70/144 (48%), Gaps = 9/144 (6%)
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHED 462
LVKL + +V +Y+P G + L I + RF + V + YLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAAQIVLT-FEYLHS- 160
Query: 463 WEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTG 522
+++RD+KP N+L+D ++ DFG A+ +T L GT Y+ PE++ +
Sbjct: 161 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSK 214
Query: 523 KASTSTDVYAFGVFMLEVASGRRP 546
+ + D +A GV + E+A+G P
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 70/144 (48%), Gaps = 9/144 (6%)
Query: 403 LVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKPCLNWYQRFRIIRGVASGLLYLHED 462
LVKL + +V +Y+P G + L I + RF + V + YLH
Sbjct: 96 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLR-RIGRFSEPHARFYAAQIVLT-FEYLHS- 152
Query: 463 WEQVVLHRDIKPANVLLDADLNGKLGDFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTG 522
+++RD+KP N+L+D ++ DFG A+ +T L GT Y+ PE++ +
Sbjct: 153 --LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSK 206
Query: 523 KASTSTDVYAFGVFMLEVASGRRP 546
+ + D +A GV + E+A+G P
Sbjct: 207 GYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 87/188 (46%), Gaps = 13/188 (6%)
Query: 381 SKQGI--KEFVAELVSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKILHTNIKP 438
S++G+ +E E+ + +RH N++ L K + +L+ + + G L L K
Sbjct: 46 SRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAE--KE 103
Query: 439 CLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDIKPANV-LLDADLNG---KLGDFGLAR 494
L + + ++ + G+ YLH + + H D+KP N+ LLD ++ KL DFG+A
Sbjct: 104 SLTEDEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 160
Query: 495 LYDHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEVASGRRPVEQQGSME 554
+ + + GT ++ PE++ D+++ GV + SG P + E
Sbjct: 161 KIEAGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE 218
Query: 555 TVNLVDWV 562
T+ + V
Sbjct: 219 TLTNISAV 226
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 92/196 (46%), Gaps = 16/196 (8%)
Query: 375 KKVSHDSKQGI--KEFVAELVSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKIL 432
K+ + S++G+ ++ E+ + ++H N++ L K + +L+ + + G L L
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 433 HTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDIKPANV-LLDADLNG---KLG 488
K L + ++ + +G+ YLH + H D+KP N+ LLD ++ K+
Sbjct: 106 AE--KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKII 160
Query: 489 DFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEVASGRRPV- 547
DFGLA D + + GT ++ PE++ D+++ GV + SG P
Sbjct: 161 DFGLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
Query: 548 --EQQGSMETVNLVDW 561
+Q ++ V+ V++
Sbjct: 219 GDTKQETLANVSAVNY 234
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 88/188 (46%), Gaps = 13/188 (6%)
Query: 375 KKVSHDSKQGI--KEFVAELVSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKIL 432
K+ S S++G+ +E E+ + ++ H N++ L + + +L+ + + G L L
Sbjct: 47 KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL 106
Query: 433 HTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDIKPANV-LLDADL---NGKLG 488
K L+ + I+ + G+ YLH + + H D+KP N+ LLD ++ + KL
Sbjct: 107 AQ--KESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLI 161
Query: 489 DFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEVASGRRPVE 548
DFGLA + + + GT ++ PE++ D+++ GV + SG P
Sbjct: 162 DFGLAHEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 219
Query: 549 QQGSMETV 556
ET+
Sbjct: 220 GDTKQETL 227
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 90/188 (47%), Gaps = 13/188 (6%)
Query: 375 KKVSHDSKQGI--KEFVAELVSMGRLRHRNLVKLRGYCRRKGEFLLVYDYMPNGSLDKIL 432
K+ S S++G+ +E E+ + ++ H N++ L + + +L+ + + G L L
Sbjct: 47 KRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL 106
Query: 433 HTNIKPCLNWYQRFRIIRGVASGLLYLHEDWEQVVLHRDIKPANV-LLDADL---NGKLG 488
K L+ + I+ + G+ YLH + + H D+KP N+ LLD ++ + KL
Sbjct: 107 AQ--KESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLI 161
Query: 489 DFGLARLYDHDTIPQTTKLVGTFGYMDPELMRTGKASTSTDVYAFGVFMLEVASGRRPVE 548
DFGLA ++ + + + GT ++ PE++ D+++ GV + SG P
Sbjct: 162 DFGLA--HEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 219
Query: 549 QQGSMETV 556
ET+
Sbjct: 220 GDTKQETL 227
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,346,952
Number of Sequences: 62578
Number of extensions: 721431
Number of successful extensions: 4188
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 839
Number of HSP's successfully gapped in prelim test: 336
Number of HSP's that attempted gapping in prelim test: 1668
Number of HSP's gapped (non-prelim): 1273
length of query: 614
length of database: 14,973,337
effective HSP length: 105
effective length of query: 509
effective length of database: 8,402,647
effective search space: 4276947323
effective search space used: 4276947323
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)