BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044569
(116 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|356567706|ref|XP_003552058.1| PREDICTED: uncharacterized protein LOC100800404 [Glycine max]
Length = 176
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/75 (65%), Positives = 52/75 (69%), Gaps = 13/75 (17%)
Query: 40 GNLPIKLLMPNTFQNIKEIAAKTIPS-------------NGFEVDEARTLNKGGKKKKWG 86
NLPIKLLMPN+F NI EIA KTIPS GF+VD+ RTLN GKKKK G
Sbjct: 13 ANLPIKLLMPNSFTNIHEIALKTIPSATKIEIKRVLQSLYGFDVDKVRTLNMEGKKKKRG 72
Query: 87 GLLNAKPDYKKAYVT 101
GLL AKPDYKKAYVT
Sbjct: 73 GLLIAKPDYKKAYVT 87
>gi|147784232|emb|CAN63891.1| hypothetical protein VITISV_012657 [Vitis vinifera]
Length = 480
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/74 (63%), Positives = 53/74 (71%), Gaps = 13/74 (17%)
Query: 41 NLPIKLLMPNTFQNIKEIAAKTIPS-------------NGFEVDEARTLNKGGKKKKWGG 87
NLPIKLLMP++F NIKEIA KT+PS GFEV++ RTLN GKKKK GG
Sbjct: 323 NLPIKLLMPSSFTNIKEIALKTVPSASKIEIKRVLESLYGFEVEKVRTLNMEGKKKKRGG 382
Query: 88 LLNAKPDYKKAYVT 101
LL AKPDYKKAY+T
Sbjct: 383 LLIAKPDYKKAYIT 396
>gi|359497264|ref|XP_002270942.2| PREDICTED: uncharacterized protein LOC100245960 [Vitis vinifera]
gi|296084744|emb|CBI25888.3| unnamed protein product [Vitis vinifera]
Length = 170
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/74 (63%), Positives = 53/74 (71%), Gaps = 13/74 (17%)
Query: 41 NLPIKLLMPNTFQNIKEIAAKTIPS-------------NGFEVDEARTLNKGGKKKKWGG 87
NLPIKLLMP++F NIKEIA KT+PS GFEV++ RTLN GKKKK GG
Sbjct: 14 NLPIKLLMPSSFTNIKEIALKTVPSASKIEIKRVLESLYGFEVEKVRTLNMEGKKKKRGG 73
Query: 88 LLNAKPDYKKAYVT 101
LL AKPDYKKAY+T
Sbjct: 74 LLIAKPDYKKAYIT 87
>gi|255580880|ref|XP_002531259.1| RNA binding protein, putative [Ricinus communis]
gi|223529144|gb|EEF31123.1| RNA binding protein, putative [Ricinus communis]
Length = 174
Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/75 (62%), Positives = 50/75 (66%), Gaps = 13/75 (17%)
Query: 40 GNLPIKLLMPNTFQNIKEIAAKTIPS-------------NGFEVDEARTLNKGGKKKKWG 86
NLPIKLLMP TF NI+E A KTIPS GFEVD+ RTLN GKKKK G
Sbjct: 13 ANLPIKLLMPKTFNNIEEFALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRG 72
Query: 87 GLLNAKPDYKKAYVT 101
G L AKPDYKKAY+T
Sbjct: 73 GFLAAKPDYKKAYIT 87
>gi|449438835|ref|XP_004137193.1| PREDICTED: 50S ribosomal protein L23-like [Cucumis sativus]
gi|449483270|ref|XP_004156540.1| PREDICTED: 50S ribosomal protein L23-like isoform 1 [Cucumis
sativus]
gi|449483272|ref|XP_004156541.1| PREDICTED: 50S ribosomal protein L23-like isoform 2 [Cucumis
sativus]
Length = 174
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/75 (62%), Positives = 51/75 (68%), Gaps = 13/75 (17%)
Query: 40 GNLPIKLLMPNTFQNIKEIAAKTIPS-------------NGFEVDEARTLNKGGKKKKWG 86
NLPIKLLMP +F NI EIA KTIPS GFEVD+ +TLN GKKKK G
Sbjct: 13 ANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVQTLNMEGKKKKRG 72
Query: 87 GLLNAKPDYKKAYVT 101
G+L AKPDYKKAYVT
Sbjct: 73 GILIAKPDYKKAYVT 87
>gi|77999307|gb|ABB17000.1| ribosomal protein L23 family protein [Solanum tuberosum]
Length = 188
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 52/74 (70%), Gaps = 13/74 (17%)
Query: 41 NLPIKLLMPNTFQNIKEIAAKTIPS-------------NGFEVDEARTLNKGGKKKKWGG 87
NLPIKLLMP++F NI EI+ KTIPS GFEV++ +TLN GKKKK GG
Sbjct: 14 NLPIKLLMPSSFSNITEISLKTIPSASKIEIKRVLESLYGFEVEKVQTLNMDGKKKKRGG 73
Query: 88 LLNAKPDYKKAYVT 101
LL AKPDYKKAYVT
Sbjct: 74 LLIAKPDYKKAYVT 87
>gi|224083685|ref|XP_002307085.1| predicted protein [Populus trichocarpa]
gi|222856534|gb|EEE94081.1| predicted protein [Populus trichocarpa]
Length = 177
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 49/75 (65%), Gaps = 13/75 (17%)
Query: 40 GNLPIKLLMPNTFQNIKEIAAKTIPS-------------NGFEVDEARTLNKGGKKKKWG 86
NLPIKLLMP T+ NI EIA KTIPS GF+V++ TLN GKKKK G
Sbjct: 13 ANLPIKLLMPTTYTNISEIALKTIPSASKIEIKRVLESLYGFDVEKVSTLNMEGKKKKRG 72
Query: 87 GLLNAKPDYKKAYVT 101
G L AKPDYKKAYVT
Sbjct: 73 GFLIAKPDYKKAYVT 87
>gi|357463337|ref|XP_003601950.1| 50S ribosomal protein L23 [Medicago truncatula]
gi|355490998|gb|AES72201.1| 50S ribosomal protein L23 [Medicago truncatula]
Length = 258
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 50/74 (67%), Gaps = 13/74 (17%)
Query: 41 NLPIKLLMPNTFQNIKEIAAKTIPS-------------NGFEVDEARTLNKGGKKKKWGG 87
NLPIKLL+P F +I EIA KTIPS GF+V++ RTLN GKKKK GG
Sbjct: 14 NLPIKLLLPTNFTDIHEIALKTIPSASKIEIKRVLESLYGFDVEKVRTLNMDGKKKKRGG 73
Query: 88 LLNAKPDYKKAYVT 101
++ AKPDYKKA+VT
Sbjct: 74 IVIAKPDYKKAFVT 87
>gi|217075578|gb|ACJ86149.1| unknown [Medicago truncatula]
Length = 208
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 50/74 (67%), Gaps = 13/74 (17%)
Query: 41 NLPIKLLMPNTFQNIKEIAAKTIPS-------------NGFEVDEARTLNKGGKKKKWGG 87
NLPIKLL+P F +I EIA KTIPS GF+V++ RTLN GKKKK GG
Sbjct: 14 NLPIKLLLPTNFTDIHEIALKTIPSASKIEIKRVLESLYGFDVEKVRTLNMDGKKKKRGG 73
Query: 88 LLNAKPDYKKAYVT 101
++ AKPDYKKA+VT
Sbjct: 74 IVIAKPDYKKAFVT 87
>gi|294461841|gb|ADE76478.1| unknown [Picea sitchensis]
Length = 164
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 52/75 (69%), Gaps = 13/75 (17%)
Query: 40 GNLPIKLLMPNTFQNIKEIAAKTIPS-------------NGFEVDEARTLNKGGKKKKWG 86
NLP+KL+MP++ +NIKE+A KT+PS G EV++ +TLN GKKK+ G
Sbjct: 13 ANLPLKLVMPSSRENIKEVAFKTVPSASKIEIKRVLESLYGLEVEKVQTLNMQGKKKRRG 72
Query: 87 GLLNAKPDYKKAYVT 101
G++ AKPDYKKAYVT
Sbjct: 73 GIVYAKPDYKKAYVT 87
>gi|15236061|ref|NP_195698.1| Ribosomal protein L23/L15e family protein [Arabidopsis thaliana]
gi|4490739|emb|CAB38901.1| putative protein [Arabidopsis thaliana]
gi|7271043|emb|CAB80651.1| putative protein [Arabidopsis thaliana]
gi|20260582|gb|AAM13189.1| putative protein [Arabidopsis thaliana]
gi|30102886|gb|AAP21361.1| At4g39880 [Arabidopsis thaliana]
gi|332661733|gb|AEE87133.1| Ribosomal protein L23/L15e family protein [Arabidopsis thaliana]
Length = 178
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 46/75 (61%), Gaps = 13/75 (17%)
Query: 40 GNLPIKLLMPNTFQNIKEIAAKTIPS-------------NGFEVDEARTLNKGGKKKKWG 86
NLPIKLLMP NI E A KTIPS GF+V++ TLN GKKKK G
Sbjct: 13 ANLPIKLLMPAKLTNIHEFALKTIPSASKIEIKRVLESLYGFDVEKVNTLNMDGKKKKRG 72
Query: 87 GLLNAKPDYKKAYVT 101
GLL AK DYKKAYVT
Sbjct: 73 GLLIAKADYKKAYVT 87
>gi|297798014|ref|XP_002866891.1| hypothetical protein ARALYDRAFT_490774 [Arabidopsis lyrata subsp.
lyrata]
gi|297312727|gb|EFH43150.1| hypothetical protein ARALYDRAFT_490774 [Arabidopsis lyrata subsp.
lyrata]
Length = 174
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 46/75 (61%), Gaps = 13/75 (17%)
Query: 40 GNLPIKLLMPNTFQNIKEIAAKTIPS-------------NGFEVDEARTLNKGGKKKKWG 86
NLPIKLLMP NI E A KTIPS GF+V++ TLN GKKKK G
Sbjct: 13 ANLPIKLLMPAKLTNIHEFALKTIPSASKIEIKRVLESLYGFDVEKVNTLNMDGKKKKRG 72
Query: 87 GLLNAKPDYKKAYVT 101
GLL AK DYKKAYVT
Sbjct: 73 GLLIAKADYKKAYVT 87
>gi|21554117|gb|AAM63197.1| unknown [Arabidopsis thaliana]
Length = 178
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 46/74 (62%), Gaps = 13/74 (17%)
Query: 41 NLPIKLLMPNTFQNIKEIAAKTIPS-------------NGFEVDEARTLNKGGKKKKWGG 87
NLPIKLLMP NI E A KTIPS GF+V++ TLN GKKKK GG
Sbjct: 14 NLPIKLLMPAKLTNIHEFALKTIPSASKIEIKRVLESLYGFDVEKVNTLNMDGKKKKRGG 73
Query: 88 LLNAKPDYKKAYVT 101
LL AK DYKKAYVT
Sbjct: 74 LLIAKADYKKAYVT 87
>gi|356511093|ref|XP_003524264.1| PREDICTED: 50S ribosomal protein L23-like [Glycine max]
Length = 111
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 48/75 (64%), Gaps = 14/75 (18%)
Query: 41 NLPIKLLMPNTFQN-IKEIAAKTIPS-------------NGFEVDEARTLNKGGKKKKWG 86
NLP+ LMP+T N IKEIA KT PS GFEV++ RTLN GKKK++
Sbjct: 6 NLPMTPLMPSTSSNDIKEIAFKTAPSASKVEIKRFLETFYGFEVEKVRTLNMKGKKKRYA 65
Query: 87 GLLNAKPDYKKAYVT 101
G L AKPDYKKAYVT
Sbjct: 66 GSLVAKPDYKKAYVT 80
>gi|356528473|ref|XP_003532827.1| PREDICTED: 50S ribosomal protein L23-like [Glycine max]
Length = 113
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 47/76 (61%), Gaps = 15/76 (19%)
Query: 41 NLPIKLLMP--NTFQNIKEIAAKTIPS-------------NGFEVDEARTLNKGGKKKKW 85
NLP+ LMP + NIKEIA KT PS GFEV++ RTLN GKKK++
Sbjct: 6 NLPMTPLMPASTSSNNIKEIAFKTAPSASKVEIKRFLETFYGFEVEKVRTLNMKGKKKRY 65
Query: 86 GGLLNAKPDYKKAYVT 101
G L AKPDYKKAYVT
Sbjct: 66 AGSLVAKPDYKKAYVT 81
>gi|326520443|dbj|BAK07480.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 227
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 45/75 (60%), Gaps = 14/75 (18%)
Query: 41 NLPIKLLMP-NTFQNIKEIAAKTIPS-------------NGFEVDEARTLNKGGKKKKWG 86
NLPIKL++P + +++E A +T+PS GF V E RTLN GKK + G
Sbjct: 14 NLPIKLMLPPSPLSSVQEFAVRTVPSASKVDIRRCLESMYGFSVAEVRTLNMDGKKIRRG 73
Query: 87 GLLNAKPDYKKAYVT 101
L AKPDYKKAYVT
Sbjct: 74 SFLAAKPDYKKAYVT 88
>gi|326518742|dbj|BAJ92532.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 227
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 45/75 (60%), Gaps = 14/75 (18%)
Query: 41 NLPIKLLMP-NTFQNIKEIAAKTIPS-------------NGFEVDEARTLNKGGKKKKWG 86
NLPIKL++P + +++E A +T+PS GF V E RTLN GKK + G
Sbjct: 14 NLPIKLMLPPSPLSSVQEFAVRTVPSASKVDIRRCLESMYGFSVAEVRTLNMDGKKIRRG 73
Query: 87 GLLNAKPDYKKAYVT 101
L AKPDYKKAYVT
Sbjct: 74 SFLAAKPDYKKAYVT 88
>gi|357111997|ref|XP_003557796.1| PREDICTED: uncharacterized protein LOC100826794 [Brachypodium
distachyon]
Length = 230
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 44/75 (58%), Gaps = 14/75 (18%)
Query: 41 NLPIKLLMPNT-FQNIKEIAAKTIPS-------------NGFEVDEARTLNKGGKKKKWG 86
NLPIKL++P +++E A KTIPS GF + E RTLN GKK + G
Sbjct: 14 NLPIKLMLPPAPLSSVQEFAVKTIPSASKVDIRRCLESMYGFSIAEVRTLNMEGKKLRRG 73
Query: 87 GLLNAKPDYKKAYVT 101
L AKPDYKKAYVT
Sbjct: 74 PFLAAKPDYKKAYVT 88
>gi|242056009|ref|XP_002457150.1| hypothetical protein SORBIDRAFT_03g002160 [Sorghum bicolor]
gi|241929125|gb|EES02270.1| hypothetical protein SORBIDRAFT_03g002160 [Sorghum bicolor]
Length = 226
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 44/75 (58%), Gaps = 14/75 (18%)
Query: 41 NLPIKLLMPNT-FQNIKEIAAKTIPS-------------NGFEVDEARTLNKGGKKKKWG 86
NLP+KL++P +++E A +T+PS GF V E RTLN GKK + G
Sbjct: 14 NLPLKLMLPPAPLSSVQEFAVRTVPSASKVDIRRCLESMYGFSVAEVRTLNMEGKKLRRG 73
Query: 87 GLLNAKPDYKKAYVT 101
L AKPDYKKAYVT
Sbjct: 74 PFLAAKPDYKKAYVT 88
>gi|226506760|ref|NP_001148914.1| LOC100282534 [Zea mays]
gi|195623246|gb|ACG33453.1| RNA binding protein [Zea mays]
Length = 226
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 45/76 (59%), Gaps = 14/76 (18%)
Query: 40 GNLPIKLLMPNT-FQNIKEIAAKTIPS-------------NGFEVDEARTLNKGGKKKKW 85
NLP+K+++P +++E A +T+PS GF V E RTLN GKK +
Sbjct: 13 ANLPLKVMLPPAPLSSVQEFAVRTVPSASKVDIRRCLESMYGFSVAEVRTLNMEGKKLRR 72
Query: 86 GGLLNAKPDYKKAYVT 101
G L+AKPDYKKAYVT
Sbjct: 73 GPFLSAKPDYKKAYVT 88
>gi|219887541|gb|ACL54145.1| unknown [Zea mays]
gi|414875761|tpg|DAA52892.1| TPA: RNA binding protein [Zea mays]
Length = 226
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 45/75 (60%), Gaps = 14/75 (18%)
Query: 41 NLPIKLLMPNT-FQNIKEIAAKTIPS-------------NGFEVDEARTLNKGGKKKKWG 86
NLP+K+++P +++E A +T+PS GF V E RTLN GKK + G
Sbjct: 14 NLPLKVMLPPAPLSSVQEFAVRTVPSASKVDIRRCLESMYGFSVAEVRTLNMEGKKLRRG 73
Query: 87 GLLNAKPDYKKAYVT 101
L+AKPDYKKAYVT
Sbjct: 74 PFLSAKPDYKKAYVT 88
>gi|115471723|ref|NP_001059460.1| Os07g0415200 [Oryza sativa Japonica Group]
gi|34394046|dbj|BAC84107.1| unknown protein [Oryza sativa Japonica Group]
gi|113610996|dbj|BAF21374.1| Os07g0415200 [Oryza sativa Japonica Group]
gi|215692393|dbj|BAG87813.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222636895|gb|EEE67027.1| hypothetical protein OsJ_23959 [Oryza sativa Japonica Group]
Length = 229
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 44/75 (58%), Gaps = 14/75 (18%)
Query: 41 NLPIKLLMPNT-FQNIKEIAAKTIPS-------------NGFEVDEARTLNKGGKKKKWG 86
NLP+KL++P +++E A KT+PS GF V E RTLN GKK + G
Sbjct: 14 NLPLKLMLPPAPLSSVQEFAVKTVPSASKVDIRRCLESMYGFSVAEVRTLNMEGKKLRRG 73
Query: 87 GLLNAKPDYKKAYVT 101
L AKPDYKKAYVT
Sbjct: 74 PFLAAKPDYKKAYVT 88
>gi|125558071|gb|EAZ03607.1| hypothetical protein OsI_25744 [Oryza sativa Indica Group]
Length = 208
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 44/75 (58%), Gaps = 14/75 (18%)
Query: 41 NLPIKLLMPNT-FQNIKEIAAKTIPS-------------NGFEVDEARTLNKGGKKKKWG 86
NLP+KL++P +++E A KT+PS GF V E RTLN GKK + G
Sbjct: 14 NLPLKLMLPPAPLSSVQEFAVKTVPSASKVDIRRCLESMYGFSVAEVRTLNMEGKKLRRG 73
Query: 87 GLLNAKPDYKKAYVT 101
L AKPDYKKAYVT
Sbjct: 74 PFLAAKPDYKKAYVT 88
>gi|357443941|ref|XP_003592248.1| hypothetical protein MTR_1g100720 [Medicago truncatula]
gi|357462127|ref|XP_003601345.1| hypothetical protein MTR_3g079680 [Medicago truncatula]
gi|355481296|gb|AES62499.1| hypothetical protein MTR_1g100720 [Medicago truncatula]
gi|355490393|gb|AES71596.1| hypothetical protein MTR_3g079680 [Medicago truncatula]
Length = 151
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 46/77 (59%), Gaps = 7/77 (9%)
Query: 31 EAQNGKQA---AGNL--PIKLLMP-NTFQNIKEIAAKTIPSNGFEVDEARTLNKGGKKKK 84
E +GKQ +G L PI P +TF +I EIA KTIPS +++ R L +K
Sbjct: 10 EENHGKQIRKKSGVLHKPINQASPASTFTDIHEIALKTIPSAS-KIEIKRVLESLYGFEK 68
Query: 85 WGGLLNAKPDYKKAYVT 101
GG++ AKPDYKKA+VT
Sbjct: 69 RGGIVIAKPDYKKAFVT 85
>gi|168028270|ref|XP_001766651.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682083|gb|EDQ68504.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 106
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 35/64 (54%), Gaps = 15/64 (23%)
Query: 53 QNIKEIAAKTIPS-------------NGFEVDEARTLNKGGKKKKWGGLLNA--KPDYKK 97
+NI E+A KTIPS G +V + TLN GKKK+ G L +PDYKK
Sbjct: 27 ENITEVAFKTIPSASKIEIKRVLETLYGLQVAKVNTLNMEGKKKRAKGSLAFYRRPDYKK 86
Query: 98 AYVT 101
AYVT
Sbjct: 87 AYVT 90
>gi|344941053|ref|ZP_08780341.1| Ribosomal protein L25/L23 [Methylobacter tundripaludum SV96]
gi|344262245|gb|EGW22516.1| Ribosomal protein L25/L23 [Methylobacter tundripaludum SV96]
Length = 99
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 69 EVDEARTLNKGGKKKKWGGLLNAKPDYKKAYVTSPP 104
EVD + LN GK+K++GG L + D+KKAYV P
Sbjct: 55 EVDSVQVLNVKGKQKRFGGSLGQRSDWKKAYVKLKP 90
>gi|339478065|ref|YP_004706885.1| putative 50S ribosomal protein L23 [Candidatus Moranella endobia
PCIT]
gi|338172616|gb|AEI75017.1| putative 50S ribosomal protein L23 [Candidatus Moranella endobia
PCIT]
Length = 112
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 42 LPIKLLMPNTFQNIKEIAAKTIPSNGFEVDEARTLNKGGKKKKWGGLLNAKPDYKKAYVT 101
+ IK+L T + IK K G EV+ RTL GK K+ G L+ + D+KKAY+T
Sbjct: 30 IVIKVLKDATKKTIKTAVNKLF---GIEVNNVRTLVVKGKTKRQGKLIGCRSDWKKAYIT 86
>gi|53803406|ref|YP_114786.1| 50S ribosomal protein L23 [Methylococcus capsulatus str. Bath]
gi|81681359|sp|Q605B4.1|RL23_METCA RecName: Full=50S ribosomal protein L23
gi|53757167|gb|AAU91458.1| ribosomal protein L23 [Methylococcus capsulatus str. Bath]
Length = 97
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 23/38 (60%)
Query: 67 GFEVDEARTLNKGGKKKKWGGLLNAKPDYKKAYVTSPP 104
G +VD R LN GK K++G + + D+KKAYV P
Sbjct: 51 GVKVDSVRILNVKGKSKRFGRFMGQRSDWKKAYVKLKP 88
>gi|407792410|ref|ZP_11139471.1| 50S ribosomal protein L23 [Gallaecimonas xiamenensis 3-C-1]
gi|407197275|gb|EKE67345.1| 50S ribosomal protein L23 [Gallaecimonas xiamenensis 3-C-1]
Length = 99
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 22/36 (61%)
Query: 69 EVDEARTLNKGGKKKKWGGLLNAKPDYKKAYVTSPP 104
EVD RT+N GK K+ G + D+KKAYVT P
Sbjct: 54 EVDAVRTVNVKGKTKRHGARFGRRSDWKKAYVTLKP 89
>gi|256821664|ref|YP_003145627.1| 50S ribosomal protein L25 [Kangiella koreensis DSM 16069]
gi|256795203|gb|ACV25859.1| Ribosomal protein L25/L23 [Kangiella koreensis DSM 16069]
Length = 98
Score = 37.7 bits (86), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 26/36 (72%)
Query: 69 EVDEARTLNKGGKKKKWGGLLNAKPDYKKAYVTSPP 104
EV+ RTLN GK+K++G + +P++KKAYV+ P
Sbjct: 53 EVESVRTLNMKGKRKRFGLVEGRRPNWKKAYVSLKP 88
>gi|430761837|ref|YP_007217694.1| LSU ribosomal protein L23p (L23Ae) [Thioalkalivibrio
nitratireducens DSM 14787]
gi|430011461|gb|AGA34213.1| LSU ribosomal protein L23p (L23Ae) [Thioalkalivibrio
nitratireducens DSM 14787]
Length = 98
Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 70 VDEARTLNKGGKKKKWGGLLNAKPDYKKAYVTSPPRTRFRCG 111
V RTLN GK K++GG L + +KKAYV+ P + G
Sbjct: 52 VQSVRTLNMAGKVKRFGGRLGRRNHWKKAYVSLAPGEKIELG 93
>gi|381153130|ref|ZP_09864999.1| ribosomal protein L23 [Methylomicrobium album BG8]
gi|380885102|gb|EIC30979.1| ribosomal protein L23 [Methylomicrobium album BG8]
Length = 99
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 25 IRSEITEAQNGKQAAGN--LPIKLLMPNTFQNIKEIAAKTIPSNGFEVDEARTLNKGGKK 82
IR+ + ++ QA N + K+L T + IK+ A + N EVD LN GK+
Sbjct: 12 IRAPVISEKSTLQAEVNKIIVFKVLKQATKKQIKD--AVELMFN-VEVDNVNVLNVQGKQ 68
Query: 83 KKWGGLLNAKPDYKKAYVTSPP 104
K++G L K D+KKAYV P
Sbjct: 69 KRFGRTLGKKSDWKKAYVKLKP 90
>gi|357406673|ref|YP_004918597.1| 50S ribosomal protein L23 [Methylomicrobium alcaliphilum 20Z]
gi|351719338|emb|CCE25014.1| 50S ribosomal subunit protein L23 [Methylomicrobium alcaliphilum
20Z]
Length = 100
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 22/32 (68%)
Query: 69 EVDEARTLNKGGKKKKWGGLLNAKPDYKKAYV 100
+VD R LN GKKK++G L + D+KKAYV
Sbjct: 56 KVDSVRVLNVKGKKKRFGQTLGKRSDWKKAYV 87
>gi|91791541|ref|YP_561192.1| 50S ribosomal protein L23 [Shewanella denitrificans OS217]
gi|123357237|sp|Q12SV7.1|RL23_SHEDO RecName: Full=50S ribosomal protein L23
gi|91713543|gb|ABE53469.1| LSU ribosomal protein L23P [Shewanella denitrificans OS217]
Length = 100
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 25/45 (55%)
Query: 57 EIAAKTIPSNGFEVDEARTLNKGGKKKKWGGLLNAKPDYKKAYVT 101
EI A EVD RTL GK K+ GG + + D+KKAYVT
Sbjct: 42 EIKAAVAKLFEVEVDSVRTLVNKGKTKRTGGRVGRRSDWKKAYVT 86
>gi|148652240|ref|YP_001279333.1| 50S ribosomal protein L23 [Psychrobacter sp. PRwf-1]
gi|172048473|sp|A5WCJ2.1|RL23_PSYWF RecName: Full=50S ribosomal protein L23
gi|148571324|gb|ABQ93383.1| LSU ribosomal protein L23P [Psychrobacter sp. PRwf-1]
Length = 116
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 67 GFEVDEARTLNKGGKKKKWGGLLNAKPDYKKAYVT 101
G EV + TLN GK K++G + + DYKKAYVT
Sbjct: 52 GVEVTKVNTLNVKGKTKRFGRTVGRRNDYKKAYVT 86
>gi|255073037|ref|XP_002500193.1| ribosomal protein L23 [Micromonas sp. RCC299]
gi|226515455|gb|ACO61451.1| ribosomal protein L23 [Micromonas sp. RCC299]
Length = 160
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 18/78 (23%)
Query: 41 NLPIKLLMPNTFQNIKEIAAKTI-----PS-------------NGFEVDEARTLNKGGKK 82
N+ ++L+ PN N E+ + P+ G V+ T+N GKK
Sbjct: 27 NIDLRLVPPNAEANAHEVGMDVVTFITRPAVTKVDVKECLEKVYGVGVERVHTVNYEGKK 86
Query: 83 KKWGGLLNAKPDYKKAYV 100
K+ G +PDYKK YV
Sbjct: 87 KRRGNYFYHRPDYKKVYV 104
>gi|430376141|ref|ZP_19430544.1| 50S ribosomal protein L23 [Moraxella macacae 0408225]
gi|429541372|gb|ELA09400.1| 50S ribosomal protein L23 [Moraxella macacae 0408225]
Length = 107
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 67 GFEVDEARTLNKGGKKKKWGGLLNAKPDYKKAYVT 101
G EV + TLN GK K++G + + DYKKAYVT
Sbjct: 52 GVEVLKVNTLNVKGKTKRFGRTVGRRQDYKKAYVT 86
>gi|400286813|ref|ZP_10788845.1| 50S ribosomal protein L23 [Psychrobacter sp. PAMC 21119]
Length = 116
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 67 GFEVDEARTLNKGGKKKKWGGLLNAKPDYKKAYVT 101
G EV + TLN GK K++G + + DYKKAYVT
Sbjct: 52 GVEVLKVNTLNVKGKTKRFGKSIGRRNDYKKAYVT 86
>gi|296113795|ref|YP_003627733.1| 50S ribosomal protein L23 [Moraxella catarrhalis RH4]
gi|416156536|ref|ZP_11604575.1| 50S ribosomal protein L23 [Moraxella catarrhalis 101P30B1]
gi|416216070|ref|ZP_11623471.1| 50S ribosomal protein L23 [Moraxella catarrhalis 7169]
gi|416220580|ref|ZP_11625504.1| 50S ribosomal protein L23 [Moraxella catarrhalis 103P14B1]
gi|416228029|ref|ZP_11627381.1| 50S ribosomal protein L23 [Moraxella catarrhalis 46P47B1]
gi|416234001|ref|ZP_11629599.1| 50S ribosomal protein L23 [Moraxella catarrhalis 12P80B1]
gi|416239532|ref|ZP_11632005.1| 50S ribosomal protein L23 [Moraxella catarrhalis BC1]
gi|416243863|ref|ZP_11634128.1| 50S ribosomal protein L23 [Moraxella catarrhalis BC7]
gi|416245572|ref|ZP_11634555.1| 50S ribosomal protein L23 [Moraxella catarrhalis BC8]
gi|416249264|ref|ZP_11636440.1| 50S ribosomal protein L23 [Moraxella catarrhalis CO72]
gi|416256149|ref|ZP_11639569.1| 50S ribosomal protein L23 [Moraxella catarrhalis O35E]
gi|421780593|ref|ZP_16217081.1| 50S ribosomal protein L23 [Moraxella catarrhalis RH4]
gi|295921489|gb|ADG61840.1| 50S ribosomal protein L23 [Moraxella catarrhalis BBH18]
gi|326562140|gb|EGE12468.1| 50S ribosomal protein L23 [Moraxella catarrhalis 7169]
gi|326564495|gb|EGE14721.1| 50S ribosomal protein L23 [Moraxella catarrhalis 46P47B1]
gi|326565678|gb|EGE15841.1| 50S ribosomal protein L23 [Moraxella catarrhalis 12P80B1]
gi|326566247|gb|EGE16399.1| 50S ribosomal protein L23 [Moraxella catarrhalis 103P14B1]
gi|326567101|gb|EGE17223.1| 50S ribosomal protein L23 [Moraxella catarrhalis BC1]
gi|326568365|gb|EGE18445.1| 50S ribosomal protein L23 [Moraxella catarrhalis BC7]
gi|326572266|gb|EGE22261.1| 50S ribosomal protein L23 [Moraxella catarrhalis BC8]
gi|326574608|gb|EGE24548.1| 50S ribosomal protein L23 [Moraxella catarrhalis O35E]
gi|326574864|gb|EGE24794.1| 50S ribosomal protein L23 [Moraxella catarrhalis 101P30B1]
gi|326576188|gb|EGE26103.1| 50S ribosomal protein L23 [Moraxella catarrhalis CO72]
gi|407812281|gb|EKF83067.1| 50S ribosomal protein L23 [Moraxella catarrhalis RH4]
Length = 109
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 67 GFEVDEARTLNKGGKKKKWGGLLNAKPDYKKAYVTSPPRTRFRCG 111
G EV + TLN GK K++G ++ + D KKAYVT + + G
Sbjct: 52 GVEVVKVNTLNTKGKTKRFGRVVGKRSDVKKAYVTLKAGSDVQIG 96
>gi|114561338|ref|YP_748851.1| 50S ribosomal protein L23 [Shewanella frigidimarina NCIMB 400]
gi|122301113|sp|Q089Q2.1|RL23_SHEFN RecName: Full=50S ribosomal protein L23
gi|114332631|gb|ABI70013.1| LSU ribosomal protein L23P [Shewanella frigidimarina NCIMB 400]
Length = 100
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 25/45 (55%)
Query: 57 EIAAKTIPSNGFEVDEARTLNKGGKKKKWGGLLNAKPDYKKAYVT 101
EI A EVD RTL GK K+ GG + + D+KKAYVT
Sbjct: 42 EIKAAVAKLFEVEVDSVRTLVNKGKTKRTGGRVGRRIDWKKAYVT 86
>gi|333368270|ref|ZP_08460480.1| 50S ribosomal protein L23 [Psychrobacter sp. 1501(2011)]
gi|332977660|gb|EGK14428.1| 50S ribosomal protein L23 [Psychrobacter sp. 1501(2011)]
Length = 117
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 67 GFEVDEARTLNKGGKKKKWGGLLNAKPDYKKAYVT 101
G EV + TLN GK K++G + + DYKKAYVT
Sbjct: 52 GVEVTKVNTLNVKGKTKRFGRTVGRRNDYKKAYVT 86
>gi|71065061|ref|YP_263788.1| 50S ribosomal protein L23 [Psychrobacter arcticus 273-4]
gi|93005316|ref|YP_579753.1| 50S ribosomal protein L23 [Psychrobacter cryohalolentis K5]
gi|123264743|sp|Q1QDI4.1|RL23_PSYCK RecName: Full=50S ribosomal protein L23
gi|123734468|sp|Q4FUF4.1|RL23_PSYA2 RecName: Full=50S ribosomal protein L23
gi|71038046|gb|AAZ18354.1| LSU ribosomal protein L23P [Psychrobacter arcticus 273-4]
gi|92392994|gb|ABE74269.1| LSU ribosomal protein L23P [Psychrobacter cryohalolentis K5]
Length = 116
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 67 GFEVDEARTLNKGGKKKKWGGLLNAKPDYKKAYVT 101
G EV + TLN GK K++G + + DYKKAYVT
Sbjct: 52 GVEVLKVNTLNVKGKTKRFGKSIGRRNDYKKAYVT 86
>gi|406980268|gb|EKE01893.1| Ribosomal protein L25/L23 [uncultured bacterium]
Length = 96
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 23/33 (69%)
Query: 69 EVDEARTLNKGGKKKKWGGLLNAKPDYKKAYVT 101
+VD R N GGK++++G + + D+KKAYVT
Sbjct: 52 DVDAVRVSNVGGKRRRFGNIQGRRKDWKKAYVT 84
>gi|120596991|ref|YP_961565.1| 50S ribosomal protein L23 [Shewanella sp. W3-18-1]
gi|126176353|ref|YP_001052502.1| 50S ribosomal protein L23 [Shewanella baltica OS155]
gi|146294839|ref|YP_001185263.1| 50S ribosomal protein L23 [Shewanella putrefaciens CN-32]
gi|152998751|ref|YP_001364432.1| 50S ribosomal protein L23 [Shewanella baltica OS185]
gi|160873328|ref|YP_001552644.1| 50S ribosomal protein L23 [Shewanella baltica OS195]
gi|217975199|ref|YP_002359950.1| 50S ribosomal protein L23 [Shewanella baltica OS223]
gi|336309715|ref|ZP_08564695.1| LSU ribosomal protein L23p (L23Ae) [Shewanella sp. HN-41]
gi|373951454|ref|ZP_09611415.1| Ribosomal protein L25/L23 [Shewanella baltica OS183]
gi|378706566|ref|YP_005271460.1| 50S ribosomal protein L25 [Shewanella baltica OS678]
gi|386311957|ref|YP_006008122.1| 50S ribosomal protein L25 [Shewanella putrefaciens 200]
gi|386322726|ref|YP_006018843.1| 50S ribosomal protein L25 [Shewanella baltica BA175]
gi|386343105|ref|YP_006039471.1| 50S ribosomal protein L25 [Shewanella baltica OS117]
gi|418025003|ref|ZP_12663983.1| Ribosomal protein L25/L23 [Shewanella baltica OS625]
gi|120557084|gb|ABM23011.1| LSU ribosomal protein L23P [Shewanella sp. W3-18-1]
gi|125999558|gb|ABN63633.1| LSU ribosomal protein L23P [Shewanella baltica OS155]
gi|145566529|gb|ABP77464.1| LSU ribosomal protein L23P [Shewanella putrefaciens CN-32]
gi|151363369|gb|ABS06369.1| Ribosomal protein L25/L23 [Shewanella baltica OS185]
gi|160858850|gb|ABX47384.1| Ribosomal protein L25/L23 [Shewanella baltica OS195]
gi|217500334|gb|ACK48527.1| Ribosomal protein L25/L23 [Shewanella baltica OS223]
gi|315265555|gb|ADT92408.1| Ribosomal protein L25/L23 [Shewanella baltica OS678]
gi|319424582|gb|ADV52656.1| Ribosomal protein L25/L23 [Shewanella putrefaciens 200]
gi|333816871|gb|AEG09537.1| Ribosomal protein L25/L23 [Shewanella baltica BA175]
gi|334865506|gb|AEH15977.1| Ribosomal protein L25/L23 [Shewanella baltica OS117]
gi|335866829|gb|EGM71782.1| LSU ribosomal protein L23p (L23Ae) [Shewanella sp. HN-41]
gi|353535416|gb|EHC04978.1| Ribosomal protein L25/L23 [Shewanella baltica OS625]
gi|373888054|gb|EHQ16946.1| Ribosomal protein L25/L23 [Shewanella baltica OS183]
Length = 101
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 24/45 (53%)
Query: 57 EIAAKTIPSNGFEVDEARTLNKGGKKKKWGGLLNAKPDYKKAYVT 101
EI A EVD RTL GK K+ GG + D+KKAYVT
Sbjct: 43 EIKAAVAKLFEVEVDSVRTLVSKGKTKRTGGRTGRRSDWKKAYVT 87
>gi|145300933|ref|YP_001143774.1| 50S ribosomal protein L23 [Aeromonas salmonicida subsp. salmonicida
A449]
gi|418362607|ref|ZP_12963234.1| 50S ribosomal protein L23 [Aeromonas salmonicida subsp. salmonicida
01-B526]
gi|166986980|sp|A4ST04.1|RL23_AERS4 RecName: Full=50S ribosomal protein L23
gi|142853705|gb|ABO92026.1| ribosomal protein L23 [Aeromonas salmonicida subsp. salmonicida
A449]
gi|356686188|gb|EHI50798.1| 50S ribosomal protein L23 [Aeromonas salmonicida subsp. salmonicida
01-B526]
Length = 100
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 9/73 (12%)
Query: 29 ITEAQNGKQAAGNLPIKLLMPNTFQNIKEIAAKTIPSNGFEVDEARTLNKGGKKKKWGGL 88
+ E QN + K+ + T +K AK EV+ RTLN GK K+ G
Sbjct: 23 VAEKQN------TIVFKIAVDATKAEVKAAVAKLFE---VEVETVRTLNMKGKTKRSGAR 73
Query: 89 LNAKPDYKKAYVT 101
+ + D+KKAYVT
Sbjct: 74 VGRRSDWKKAYVT 86
>gi|117618338|ref|YP_854841.1| 50S ribosomal protein L23 [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|330827885|ref|YP_004390837.1| 50S ribosomal protein L23 [Aeromonas veronii B565]
gi|334702726|ref|ZP_08518592.1| 50S ribosomal protein L23 [Aeromonas caviae Ae398]
gi|406674859|ref|ZP_11082051.1| 50S ribosomal protein L23 [Aeromonas veronii AMC35]
gi|411011176|ref|ZP_11387505.1| 50S ribosomal protein L23 [Aeromonas aquariorum AAK1]
gi|423199195|ref|ZP_17185778.1| 50S ribosomal protein L23 [Aeromonas hydrophila SSU]
gi|423203669|ref|ZP_17190237.1| 50S ribosomal protein L23 [Aeromonas veronii AER39]
gi|423204894|ref|ZP_17191450.1| 50S ribosomal protein L23 [Aeromonas veronii AMC34]
gi|423211443|ref|ZP_17197976.1| 50S ribosomal protein L23 [Aeromonas veronii AER397]
gi|166986978|sp|A0KF23.1|RL23_AERHH RecName: Full=50S ribosomal protein L23
gi|117559745|gb|ABK36693.1| ribosomal protein L23 [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
gi|328803021|gb|AEB48220.1| 50S ribosomal protein L23 [Aeromonas veronii B565]
gi|404612447|gb|EKB09508.1| 50S ribosomal protein L23 [Aeromonas veronii AER39]
gi|404613523|gb|EKB10544.1| 50S ribosomal protein L23 [Aeromonas veronii AER397]
gi|404625770|gb|EKB22585.1| 50S ribosomal protein L23 [Aeromonas veronii AMC34]
gi|404628367|gb|EKB25149.1| 50S ribosomal protein L23 [Aeromonas veronii AMC35]
gi|404629549|gb|EKB26296.1| 50S ribosomal protein L23 [Aeromonas hydrophila SSU]
Length = 100
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 9/73 (12%)
Query: 29 ITEAQNGKQAAGNLPIKLLMPNTFQNIKEIAAKTIPSNGFEVDEARTLNKGGKKKKWGGL 88
+ E QN + K+ + T +K AK EV+ RTLN GK K+ G
Sbjct: 23 VAEKQN------TIVFKVAVDATKAEVKAAVAKLFE---VEVETVRTLNMKGKTKRAGAR 73
Query: 89 LNAKPDYKKAYVT 101
+ + D+KKAYVT
Sbjct: 74 VGRRSDWKKAYVT 86
>gi|257454049|ref|ZP_05619323.1| ribosomal protein L23 [Enhydrobacter aerosaccus SK60]
gi|257448527|gb|EEV23496.1| ribosomal protein L23 [Enhydrobacter aerosaccus SK60]
Length = 107
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 42 LPIKLLMPNTFQNIKEIA-AKTIPSNGFEVDEARTLNKGGKKKKWGGLLNAKPDYKKAYV 100
L +++ +T KEI A + G EV + TLN GK K++G + + D+KKAYV
Sbjct: 26 LGVQVFKVDTNATKKEIKKAVELMFEGVEVVKVNTLNVKGKTKRFGRTVGRRQDFKKAYV 85
Query: 101 T 101
T
Sbjct: 86 T 86
>gi|114319621|ref|YP_741304.1| 50S ribosomal protein L23P [Alkalilimnicola ehrlichii MLHE-1]
gi|122312454|sp|Q0ABH3.1|RL23_ALHEH RecName: Full=50S ribosomal protein L23
gi|114226015|gb|ABI55814.1| LSU ribosomal protein L23P [Alkalilimnicola ehrlichii MLHE-1]
Length = 99
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 70 VDEARTLNKGGKKKKWGGLLNAKPDYKKAYVT 101
V + RT+ GK+K++G L +PD+KKAYVT
Sbjct: 54 VRDVRTVKMKGKRKRFGRLEGKRPDWKKAYVT 85
>gi|421498518|ref|ZP_15945620.1| 50S ribosomal protein L23 [Aeromonas media WS]
gi|407182492|gb|EKE56447.1| 50S ribosomal protein L23 [Aeromonas media WS]
Length = 100
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 9/73 (12%)
Query: 29 ITEAQNGKQAAGNLPIKLLMPNTFQNIKEIAAKTIPSNGFEVDEARTLNKGGKKKKWGGL 88
+ E QN + K+ + T +K AK EV+ RTLN GK K+ G
Sbjct: 23 VAEKQN------TIVFKVAVDATKAEVKAAVAKLFE---VEVETVRTLNMKGKTKRSGAR 73
Query: 89 LNAKPDYKKAYVT 101
+ + D+KKAYVT
Sbjct: 74 VGRRSDWKKAYVT 86
>gi|410632990|ref|ZP_11343637.1| large subunit ribosomal protein L23 [Glaciecola arctica BSs20135]
gi|410147159|dbj|GAC20504.1| large subunit ribosomal protein L23 [Glaciecola arctica BSs20135]
Length = 100
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 25/48 (52%)
Query: 54 NIKEIAAKTIPSNGFEVDEARTLNKGGKKKKWGGLLNAKPDYKKAYVT 101
N +EI A EVD RTLN GK K+ G + D+KKAYV
Sbjct: 39 NKEEIKAAVEKLFEVEVDSVRTLNVKGKTKRHGASFGKRKDWKKAYVV 86
>gi|410612777|ref|ZP_11323850.1| large subunit ribosomal protein L23 [Glaciecola psychrophila 170]
gi|410167664|dbj|GAC37739.1| large subunit ribosomal protein L23 [Glaciecola psychrophila 170]
Length = 100
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 25/48 (52%)
Query: 54 NIKEIAAKTIPSNGFEVDEARTLNKGGKKKKWGGLLNAKPDYKKAYVT 101
N +EI A EVD RTLN GK K+ G + D+KKAYV
Sbjct: 39 NKEEIKAAVEKLFEVEVDSVRTLNVKGKTKRHGSSFGKRKDWKKAYVV 86
>gi|170729007|ref|YP_001763033.1| 50S ribosomal protein L23 [Shewanella woodyi ATCC 51908]
gi|226734846|sp|B1KMY1.1|RL23_SHEWM RecName: Full=50S ribosomal protein L23
gi|169814354|gb|ACA88938.1| Ribosomal protein L25/L23 [Shewanella woodyi ATCC 51908]
Length = 99
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%)
Query: 57 EIAAKTIPSNGFEVDEARTLNKGGKKKKWGGLLNAKPDYKKAYVT 101
EI A EVD RTL GK K+ G + + D+KKAYVT
Sbjct: 42 EIKAAVAQLFEVEVDSVRTLVNKGKTKRTGARMGRRVDWKKAYVT 86
>gi|350560743|ref|ZP_08929583.1| Ribosomal protein L25/L23 [Thioalkalivibrio thiocyanoxidans ARh 4]
gi|349783011|gb|EGZ37294.1| Ribosomal protein L25/L23 [Thioalkalivibrio thiocyanoxidans ARh 4]
Length = 98
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 70 VDEARTLNKGGKKKKWGGLLNAKPDYKKAYVTSPPRTRFRCG 111
V RTLN GK K++GG L + +KKAYV+ + G
Sbjct: 52 VQSVRTLNMAGKMKRFGGRLGRRNHWKKAYVSLAAGEKIELG 93
>gi|440491798|gb|ELQ74407.1| putative transporter [Trachipleistophora hominis]
Length = 682
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 10 EAQNTERERRSTEWEIRSEITEAQNGKQAAGNLPIKLLMPNTFQNIKEI-AAKTIPSNGF 68
E QNTER+ E E + +I + GKQ N P + N +K I +K I S
Sbjct: 425 EKQNTERQHNKDEEEKKRKIQKNDKGKQKHNNNPDSFIRQNELIRLKHIETSKFISSTTD 484
Query: 69 EVDE 72
+VD+
Sbjct: 485 KVDQ 488
>gi|350553107|ref|ZP_08922293.1| Ribosomal protein L25/L23 [Thiorhodospira sibirica ATCC 700588]
gi|349791958|gb|EGZ45828.1| Ribosomal protein L25/L23 [Thiorhodospira sibirica ATCC 700588]
Length = 104
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 24/35 (68%)
Query: 70 VDEARTLNKGGKKKKWGGLLNAKPDYKKAYVTSPP 104
V+ RT+N GK+K++G + + D+KKAY+T P
Sbjct: 54 VNSVRTVNVKGKRKRFGQIQGRRKDWKKAYITLVP 88
>gi|113968546|ref|YP_732339.1| 50S ribosomal protein L23 [Shewanella sp. MR-4]
gi|114045709|ref|YP_736259.1| 50S ribosomal protein L23 [Shewanella sp. MR-7]
gi|113883230|gb|ABI37282.1| LSU ribosomal protein L23P [Shewanella sp. MR-4]
gi|113887151|gb|ABI41202.1| LSU ribosomal protein L23P [Shewanella sp. MR-7]
Length = 101
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 25/45 (55%)
Query: 57 EIAAKTIPSNGFEVDEARTLNKGGKKKKWGGLLNAKPDYKKAYVT 101
EI A EV+ RTL GK K+ GG + + D+KKAYVT
Sbjct: 43 EIKAAVAKLFEVEVESVRTLVSKGKTKRTGGRVGRRSDWKKAYVT 87
>gi|297537533|ref|YP_003673302.1| 50S ribosomal protein L25/L23 [Methylotenera versatilis 301]
gi|297256880|gb|ADI28725.1| Ribosomal protein L25/L23 [Methylotenera versatilis 301]
Length = 104
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 69 EVDEARTLNKGGKKKKWGGLLNAKPDYKKAYVTSPP 104
EV++ T+N GGK K+ G + + D+KKAYV+ P
Sbjct: 59 EVEKVSTINVGGKTKRAGKSMGKRKDWKKAYVSLKP 94
>gi|124021019|sp|Q0HNT5.2|RL23_SHESM RecName: Full=50S ribosomal protein L23
gi|124021020|sp|Q0I0A3.2|RL23_SHESR RecName: Full=50S ribosomal protein L23
Length = 100
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 25/45 (55%)
Query: 57 EIAAKTIPSNGFEVDEARTLNKGGKKKKWGGLLNAKPDYKKAYVT 101
EI A EV+ RTL GK K+ GG + + D+KKAYVT
Sbjct: 42 EIKAAVAKLFEVEVESVRTLVSKGKTKRTGGRVGRRSDWKKAYVT 86
>gi|157377447|ref|YP_001476047.1| 50S ribosomal protein L23 [Shewanella sediminis HAW-EB3]
gi|189042306|sp|A8G1E6.1|RL23_SHESH RecName: Full=50S ribosomal protein L23
gi|157319821|gb|ABV38919.1| ribosomal protein L25/L23 [Shewanella sediminis HAW-EB3]
Length = 99
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 21/33 (63%)
Query: 69 EVDEARTLNKGGKKKKWGGLLNAKPDYKKAYVT 101
EVD RTL GK K+ G + + D+KKAYVT
Sbjct: 54 EVDSVRTLVNKGKTKRTGARMGRRVDWKKAYVT 86
>gi|163752596|ref|ZP_02159775.1| 50S ribosomal protein L23 [Shewanella benthica KT99]
gi|161327508|gb|EDP98715.1| 50S ribosomal protein L23 [Shewanella benthica KT99]
Length = 99
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%)
Query: 57 EIAAKTIPSNGFEVDEARTLNKGGKKKKWGGLLNAKPDYKKAYVT 101
EI A EVD RTL GK K+ G + + D+KKAYVT
Sbjct: 42 EIKAAVAKLFEVEVDSVRTLVNKGKTKRTGARIGRRIDWKKAYVT 86
>gi|88860957|ref|ZP_01135593.1| 50S ribosomal protein L23 [Pseudoalteromonas tunicata D2]
gi|88817170|gb|EAR26989.1| 50S ribosomal protein L23 [Pseudoalteromonas tunicata D2]
Length = 100
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
Query: 16 RERRSTEWEIRSEITE-AQNGKQAAGNLPIKLLMPNTFQNIKEIAAKTIPSNGFEVDEAR 74
RE R + + I+E + N + + K++ T I+ AK EV R
Sbjct: 3 REERLLKVILAPHISEKSTNNAETTNTIVFKVVKDATKAEIQAAVAKLFE---VEVTGVR 59
Query: 75 TLNKGGKKKKWGGLLNAKPDYKKAYVT 101
TLN GK K+ G + D+KKAYVT
Sbjct: 60 TLNVKGKTKRTGARFGRRSDWKKAYVT 86
>gi|294142931|ref|YP_003558909.1| 50S ribosomal protein L23 [Shewanella violacea DSS12]
gi|293329400|dbj|BAJ04131.1| ribosomal protein L23 [Shewanella violacea DSS12]
Length = 99
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 21/33 (63%)
Query: 69 EVDEARTLNKGGKKKKWGGLLNAKPDYKKAYVT 101
EVD RTL GK K+ G + + D+KKAYVT
Sbjct: 54 EVDSVRTLVNKGKTKRTGARMGRRVDWKKAYVT 86
>gi|289209327|ref|YP_003461393.1| 50S ribosomal protein L25/L23 [Thioalkalivibrio sp. K90mix]
gi|288944958|gb|ADC72657.1| Ribosomal protein L25/L23 [Thioalkalivibrio sp. K90mix]
Length = 98
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 70 VDEARTLNKGGKKKKWGGLLNAKPDYKKAYVT 101
V+ RTLN+ GKKK++G L + +KKAYV
Sbjct: 52 VENVRTLNQQGKKKRFGRLFGRRNHWKKAYVA 83
>gi|288942070|ref|YP_003444310.1| 50S ribosomal protein L25/L23 [Allochromatium vinosum DSM 180]
gi|288897442|gb|ADC63278.1| Ribosomal protein L25/L23 [Allochromatium vinosum DSM 180]
Length = 98
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 37 QAAGNLPIKLLMPNTFQNIKEIAAKTIPSNGFEVDEARTLNKGGKKKKWGGLLNAKPDYK 96
+ AG + ++L T Q E+A EVD + LN GK+K+ G L + D++
Sbjct: 24 ETAGQVTFRVLSDATKQ---EVAKAVEMLFEVEVDRVQILNVKGKQKRHGQRLGKRQDWR 80
Query: 97 KAYV 100
KAYV
Sbjct: 81 KAYV 84
>gi|157960016|ref|YP_001500050.1| 50S ribosomal protein L23 [Shewanella pealeana ATCC 700345]
gi|189042305|sp|A8GYX8.1|RL23_SHEPA RecName: Full=50S ribosomal protein L23
gi|157845016|gb|ABV85515.1| Ribosomal protein L25/L23 [Shewanella pealeana ATCC 700345]
Length = 100
Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 21/34 (61%)
Query: 68 FEVDEARTLNKGGKKKKWGGLLNAKPDYKKAYVT 101
EVD RTL GK K+ G + + D+KKAYVT
Sbjct: 53 VEVDSVRTLVNKGKTKRTGARVGRRSDWKKAYVT 86
>gi|242237861|ref|YP_002986042.1| 50S ribosomal protein L23 [Dickeya dadantii Ech703]
gi|242129918|gb|ACS84220.1| Ribosomal protein L25/L23 [Dickeya dadantii Ech703]
Length = 100
Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (64%)
Query: 68 FEVDEARTLNKGGKKKKWGGLLNAKPDYKKAYVT 101
EVD+ RTL GK K+ G + + D+KKAYVT
Sbjct: 53 VEVDDVRTLIVKGKVKRHGQRIGRRSDWKKAYVT 86
>gi|160947698|ref|ZP_02094865.1| hypothetical protein PEPMIC_01633 [Parvimonas micra ATCC 33270]
gi|335047213|ref|ZP_08540234.1| ribosomal protein L23 [Parvimonas sp. oral taxon 110 str. F0139]
gi|158446832|gb|EDP23827.1| ribosomal protein L23 [Parvimonas micra ATCC 33270]
gi|333761021|gb|EGL38576.1| ribosomal protein L23 [Parvimonas sp. oral taxon 110 str. F0139]
Length = 95
Score = 34.7 bits (78), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 67 GFEVDEARTLNKGGKKKKWGGLLNAKPDYKKAYVT 101
G +V + T+N GKKK+ G + +PD+KKA VT
Sbjct: 47 GVKVKQVNTMNITGKKKRMGANVGKRPDWKKAIVT 81
>gi|121997647|ref|YP_001002434.1| 50S ribosomal protein L23 [Halorhodospira halophila SL1]
gi|166987029|sp|A1WVC0.1|RL23_HALHL RecName: Full=50S ribosomal protein L23
gi|121589052|gb|ABM61632.1| LSU ribosomal protein L23P [Halorhodospira halophila SL1]
Length = 98
Score = 34.3 bits (77), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 54 NIKEIAAKTIPSNGFEVDEARTLNKGGKKKKWGGLLNAKPDYKKAYVT 101
N KEI A +V RT+N GK+K++G + + D+KKAYVT
Sbjct: 38 NKKEIKAAVEKLFDVQVTGVRTVNAKGKRKRFGMIRGRRRDWKKAYVT 85
>gi|431932146|ref|YP_007245192.1| 50S ribosomal protein L23 [Thioflavicoccus mobilis 8321]
gi|431830449|gb|AGA91562.1| ribosomal protein L23 [Thioflavicoccus mobilis 8321]
Length = 97
Score = 34.3 bits (77), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 56 KEIAAKTIPSNGFEVDEARTLNKGGKKKKWGGLLNAKPDYKKAYVTSPP 104
+EIA VD+ + LN GK K++G L + D++KAYV P
Sbjct: 40 REIAGAVEMMFDVAVDQVQVLNVKGKVKRFGRLYGKRKDWRKAYVRLMP 88
>gi|297618382|ref|YP_003703541.1| 50S ribosomal protein L25/L23 [Syntrophothermus lipocalidus DSM
12680]
gi|297146219|gb|ADI02976.1| Ribosomal protein L25/L23 [Syntrophothermus lipocalidus DSM 12680]
Length = 95
Score = 34.3 bits (77), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 21/33 (63%)
Query: 69 EVDEARTLNKGGKKKKWGGLLNAKPDYKKAYVT 101
+VD RT+N GKK++ G KPD KKA VT
Sbjct: 50 KVDNVRTINVKGKKRRMGRFEGYKPDRKKAIVT 82
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.312 0.129 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,855,271,894
Number of Sequences: 23463169
Number of extensions: 67708131
Number of successful extensions: 127944
Number of sequences better than 100.0: 125
Number of HSP's better than 100.0 without gapping: 103
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 127818
Number of HSP's gapped (non-prelim): 125
length of query: 116
length of database: 8,064,228,071
effective HSP length: 83
effective length of query: 33
effective length of database: 6,116,785,044
effective search space: 201853906452
effective search space used: 201853906452
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 69 (31.2 bits)