Query 044570
Match_columns 109
No_of_seqs 136 out of 653
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 07:35:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044570.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044570hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3n0f_A Isoprene synthase; terp 100.0 4.5E-36 1.5E-40 245.9 9.6 101 7-109 451-551 (555)
2 3g4d_A (+)-delta-cadinene synt 100.0 3.5E-36 1.2E-40 246.5 8.3 101 7-109 453-553 (554)
3 3m00_A Aristolochene synthase; 100.0 6.7E-36 2.3E-40 244.7 8.9 101 7-109 448-549 (550)
4 1n1b_A (+)-bornyl diphosphate 100.0 8.6E-35 2.9E-39 238.1 9.6 101 7-109 449-549 (549)
5 2ong_A 4S-limonene synthase; m 100.0 5.3E-34 1.8E-38 233.1 10.7 101 7-109 442-543 (543)
6 3sdr_A Alpha-bisabolene syntha 100.0 8.6E-34 2.9E-38 240.4 9.5 101 7-109 715-816 (817)
7 3p5p_A Taxadiene synthase; cla 100.0 1E-33 3.5E-38 238.7 8.5 101 7-109 653-755 (764)
8 2j5c_A 1,8-cineole synthase; t 100.0 2.1E-33 7.3E-38 230.6 6.4 100 7-109 469-569 (569)
9 3s9v_A Abietadiene synthase, c 100.0 2.2E-32 7.6E-37 231.0 9.1 100 7-109 684-785 (785)
10 1ps1_A Pentalenene synthase; a 99.4 1.8E-13 6.3E-18 104.1 5.9 50 7-56 221-270 (337)
11 3kb9_A EPI-isozizaene synthase 99.3 1.8E-12 6.1E-17 101.3 4.7 50 7-56 263-312 (382)
12 1di1_A Aristolochene synthase; 99.3 1.4E-12 4.9E-17 97.4 3.1 50 7-56 207-264 (300)
13 3bny_A Aristolochene synthase; 99.1 2.1E-11 7.3E-16 92.0 3.5 50 7-56 221-278 (320)
14 3v1v_A 2-MIB synthase, 2-methy 98.9 1.4E-09 4.8E-14 86.8 4.2 50 7-56 340-390 (433)
15 3pya_A ENT-copalyl diphosphate 98.6 2.1E-08 7.3E-13 84.5 3.0 61 37-108 657-719 (727)
16 1yyq_A Trichodiene synthase; t 89.9 0.3 1E-05 38.0 4.0 67 7-77 227-294 (374)
17 3fau_A NEDD4-binding protein 2 72.6 3.9 0.00013 24.5 3.4 22 30-51 6-27 (82)
18 1tr8_A Conserved protein (MTH1 59.8 7.8 0.00027 24.8 3.0 27 17-43 63-89 (102)
19 4evx_A Putative phage endolysi 58.5 31 0.0011 21.6 5.7 42 31-75 49-94 (106)
20 1fc3_A SPO0A; response regulat 57.1 32 0.0011 22.4 5.7 48 28-76 56-114 (120)
21 2d9i_A NEDD4-binding protein 2 56.5 11 0.00038 23.1 3.2 21 30-50 14-34 (96)
22 2zqe_A MUTS2 protein; alpha/be 54.4 14 0.00049 22.3 3.4 22 30-51 10-31 (83)
23 4akk_A Nitrate regulatory prot 50.8 8.6 0.00029 29.9 2.4 35 16-50 367-401 (423)
24 1xri_A AT1G05000; structural g 49.2 14 0.00047 23.7 2.9 27 18-44 105-131 (151)
25 3s4o_A Protein tyrosine phosph 47.4 17 0.00059 23.3 3.2 27 17-43 121-148 (167)
26 3rz2_A Protein tyrosine phosph 47.0 16 0.00056 24.6 3.2 28 16-43 128-155 (189)
27 3ic3_A Putative pyruvate dehyd 44.1 35 0.0012 21.8 4.1 26 23-48 61-86 (101)
28 3qd7_X Uncharacterized protein 43.2 24 0.00082 23.4 3.4 22 30-51 53-74 (137)
29 3s4e_A Dual specificity protei 42.0 27 0.00093 22.2 3.5 26 19-44 95-121 (144)
30 3mtu_A Tropomyosin alpha-1 cha 41.8 14 0.00047 22.2 1.8 18 74-92 57-74 (75)
31 1rxd_A Protein tyrosine phosph 40.9 25 0.00087 22.3 3.2 27 17-43 108-134 (159)
32 1yn9_A BVP, polynucleotide 5'- 40.7 15 0.00053 24.1 2.2 25 19-43 127-152 (169)
33 3ezz_A Dual specificity protei 39.2 17 0.00058 23.1 2.1 25 19-43 95-120 (144)
34 4aqn_A Pesticin; toxin, bacter 37.6 65 0.0022 24.9 5.4 61 21-90 239-308 (357)
35 3v2l_A AGAP005208-PA; odorant 36.7 24 0.00082 21.6 2.5 56 31-90 60-119 (120)
36 2c46_A MRNA capping enzyme; ph 35.7 40 0.0014 24.0 3.9 26 18-43 154-180 (241)
37 1nkz_B Light-harvesting protei 34.8 50 0.0017 17.6 3.2 16 31-47 2-17 (41)
38 3hdf_A Lysozyme; antimicrobial 34.6 95 0.0032 20.2 6.2 36 31-69 40-75 (140)
39 2hxp_A Dual specificity protei 33.2 44 0.0015 21.6 3.5 26 19-44 99-125 (155)
40 1zzw_A Dual specificity protei 33.1 34 0.0012 21.8 2.9 26 19-44 97-123 (149)
41 1xju_A Lysozyme; secreted inac 32.8 97 0.0033 20.8 5.3 44 31-76 43-90 (163)
42 2vkc_A NEDD4-binding protein 2 32.2 40 0.0014 22.0 3.1 20 30-49 59-78 (135)
43 3emu_A Leucine rich repeat and 31.6 48 0.0016 21.7 3.5 26 19-44 101-127 (161)
44 2nt2_A Protein phosphatase sli 31.1 52 0.0018 20.8 3.5 24 20-43 96-120 (145)
45 3f81_A Dual specificity protei 31.0 37 0.0013 22.4 2.9 26 18-43 128-154 (183)
46 1ngm_B Transcription factor II 31.0 39 0.0013 20.2 2.6 22 32-58 41-62 (72)
47 2r0b_A Serine/threonine/tyrosi 31.0 38 0.0013 21.6 2.8 25 20-44 105-130 (154)
48 3hde_A Lysozyme; antimicrobial 30.9 1.2E+02 0.0042 20.3 6.1 42 31-75 65-110 (165)
49 1lgh_B LH II, B800/850, light 30.8 60 0.0021 17.7 3.1 17 31-48 7-23 (45)
50 2img_A Dual specificity protei 30.7 39 0.0013 21.1 2.9 27 17-43 101-128 (151)
51 2hcm_A Dual specificity protei 29.9 54 0.0018 21.2 3.5 24 20-43 104-128 (164)
52 3rgo_A Protein-tyrosine phosph 29.8 41 0.0014 21.3 2.8 25 19-43 103-128 (157)
53 1uzc_A Hypothetical protein FL 29.7 40 0.0014 19.9 2.5 18 31-48 11-28 (71)
54 4e97_A Lysozyme; hydrolase, al 29.3 56 0.0019 22.3 3.6 45 31-76 80-131 (187)
55 3tq7_B Microtubule-associated 29.0 23 0.00079 21.8 1.4 19 74-93 49-67 (82)
56 2anv_A Lysozyme; direct method 28.4 1.2E+02 0.0043 19.7 5.2 42 31-75 50-95 (146)
57 2o6n_A RH4B designed peptide; 28.2 63 0.0022 16.2 2.9 22 35-56 5-26 (35)
58 2oud_A Dual specificity protei 28.1 52 0.0018 21.8 3.2 26 19-44 101-127 (177)
59 1swy_A Lysozyme; RB+ binding s 27.5 95 0.0033 20.6 4.5 44 31-75 57-107 (164)
60 1xjt_A Lysozyme; open conforma 27.3 1.3E+02 0.0045 20.8 5.3 43 31-75 71-117 (191)
61 1lj2_A NSP3-C, nonstructural R 27.0 44 0.0015 21.6 2.5 18 17-34 34-51 (110)
62 1wrm_A Dual specificity phosph 26.7 76 0.0026 20.6 3.8 25 20-44 98-123 (165)
63 2j16_A SDP-1, tyrosine-protein 26.7 63 0.0022 21.9 3.5 26 18-43 130-156 (182)
64 4erc_A Dual specificity protei 26.1 71 0.0024 19.9 3.5 25 19-43 102-127 (150)
65 1ghh_A DINI, DNA-damage-induci 25.8 67 0.0023 19.5 3.1 20 31-51 54-73 (81)
66 3ls8_A Phosphatidylinositol 3- 25.6 51 0.0018 27.3 3.2 30 21-51 572-604 (614)
67 1fpz_A Cyclin-dependent kinase 25.4 59 0.002 22.1 3.2 27 18-44 146-174 (212)
68 3nme_A Ptpkis1 protein, SEX4 g 24.5 79 0.0027 23.1 3.9 25 19-43 120-145 (294)
69 1wj7_A Hypothetical protein (R 24.4 79 0.0027 20.2 3.3 21 22-42 42-62 (104)
70 2g6z_A Dual specificity protei 24.4 72 0.0025 22.2 3.5 25 20-44 98-123 (211)
71 2e0t_A Dual specificity phosph 24.2 75 0.0026 20.0 3.3 24 20-43 100-124 (151)
72 2esb_A Dual specificity protei 23.6 79 0.0027 21.1 3.5 24 20-43 112-136 (188)
73 2z3q_A Interleukin-15, IL-15; 23.3 30 0.001 22.7 1.2 35 21-55 43-78 (119)
74 1p16_A GTP--RNA, mRNA capping 23.1 1.5E+02 0.0051 22.6 5.3 52 3-55 334-387 (395)
75 2f46_A Hypothetical protein; s 22.7 95 0.0032 20.0 3.7 24 21-44 117-140 (156)
76 2jq3_A Apolipoprotein C-III; A 22.7 24 0.00082 21.4 0.6 29 15-43 4-32 (79)
77 2o4w_A Lysozyme; protein foldi 22.6 1.3E+02 0.0045 20.2 4.5 44 31-75 46-96 (171)
78 2dsy_A Hypothetical protein TT 22.4 72 0.0025 19.1 2.8 23 31-53 43-65 (87)
79 1yz4_A DUSP15, dual specificit 22.2 85 0.0029 20.1 3.3 24 20-43 99-123 (160)
80 2rmh_A Urocortin-3; CRF ligand 22.2 73 0.0025 16.7 2.4 16 63-78 7-22 (38)
81 2cs1_A PMS1 protein homolog 1; 22.1 97 0.0033 18.4 3.4 18 38-55 35-52 (92)
82 2wgp_A Dual specificity protei 21.8 90 0.0031 20.9 3.5 25 20-44 118-143 (190)
83 3mmj_A MYO-inositol hexaphosph 21.5 45 0.0015 25.3 2.0 39 4-44 214-254 (314)
84 2ckx_A NGTRF1, telomere bindin 21.0 1.5E+02 0.005 17.8 5.6 53 48-103 22-76 (83)
85 4b6i_A SMA2266; signaling prot 21.0 64 0.0022 20.6 2.4 37 10-47 29-65 (102)
86 3f27_D Transcription factor SO 20.9 1.1E+02 0.0037 17.6 3.3 35 38-83 34-68 (83)
87 1d0q_A DNA primase; zinc-bindi 20.6 1E+02 0.0036 18.8 3.3 26 19-44 67-92 (103)
88 1e7u_A Phosphatidylinositol 3- 20.5 71 0.0024 27.8 3.2 24 26-49 909-935 (961)
No 1
>3n0f_A Isoprene synthase; terpene cyclase fold, hemiterpene synthase, DDXXD motif, NSE motif, lyase; 2.70A {Populus tremula x populus alba} PDB: 3n0g_A*
Probab=100.00 E-value=4.5e-36 Score=245.93 Aligned_cols=101 Identities=42% Similarity=0.763 Sum_probs=95.0
Q ss_pred eeeehhHHhcCCchhHHHHHHhhcCCCHHHHHHHHHHHHHHHHHhhchhhcCCCCcCcHHHHHHHHHHHhhHhhhcccCC
Q 044570 7 SVAAPDELKRGDVHKSIQCYMHEAGVSEREAREHIHDLIAQTWMKMNRDRFGNPHFVSDVFVGIAMNLARMSQCMYQFGE 86 (109)
Q Consensus 7 i~s~~~E~~rg~~~ssI~cYMke~g~seEeA~~~i~~~ie~~wK~ln~e~l~~~~~~p~~~~~~~~NlaR~~~~~Y~~~D 86 (109)
|+||++|++||+++|+|+|||||||+|+|+|+++|+++|+++||+||++++++++ +|++|+++++|+||+++++|+++|
T Consensus 451 i~S~~~E~~rG~vas~V~cYMke~GvSeEeA~~~i~~~Ie~~wK~lN~e~l~~~~-~p~~~~~~~~n~aR~~~~~Y~~~D 529 (555)
T 3n0f_A 451 LASASAEIARGETANSVSCYMRTKGISEELATESVMNLIDETWKKMNKEKLGGSL-FAKPFVETAINLARQSHCTYHNGD 529 (555)
T ss_dssp HHHHHHHHTTTCCCSHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHSCCS-SCHHHHHHHHHHHHHHHHHSCCC-
T ss_pred chhhhhhhhcCCcchHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCC-CCHHHHHHHHHHHHHHHHHhcCCC
Confidence 6799999999999999999999999999999999999999999999999999877 999999999999999999999999
Q ss_pred CCcCCchhHHHHHHHhcccCcCC
Q 044570 87 GHRHGVQEITKARVLSLIIDPIA 109 (109)
Q Consensus 87 gyt~~~~~~~k~~I~sll~~Pi~ 109 (109)
|||. |+..+|++|++||++|||
T Consensus 530 g~t~-~~~~~k~~i~~ll~~Pi~ 551 (555)
T 3n0f_A 530 AHTS-PDELTRKRVLSVITEPIL 551 (555)
T ss_dssp --CC-HHHHHHHHHHHHTTSCCC
T ss_pred CCCC-ccHHHHHHHHHHHhcCCC
Confidence 9999 877899999999999996
No 2
>3g4d_A (+)-delta-cadinene synthase isozyme XC1; cyclase, lyase, magnesium, metal-binding; 2.40A {Gossypium arboreum} PDB: 3g4f_A*
Probab=100.00 E-value=3.5e-36 Score=246.50 Aligned_cols=101 Identities=28% Similarity=0.505 Sum_probs=87.1
Q ss_pred eeeehhHHhcCCchhHHHHHHhhcCCCHHHHHHHHHHHHHHHHHhhchhhcCCCCcCcHHHHHHHHHHHhhHhhhcccCC
Q 044570 7 SVAAPDELKRGDVHKSIQCYMHEAGVSEREAREHIHDLIAQTWMKMNRDRFGNPHFVSDVFVGIAMNLARMSQCMYQFGE 86 (109)
Q Consensus 7 i~s~~~E~~rg~~~ssI~cYMke~g~seEeA~~~i~~~ie~~wK~ln~e~l~~~~~~p~~~~~~~~NlaR~~~~~Y~~~D 86 (109)
|+||++|++||+++|+|+|||||||+|+|+|+++|+++|+++||+||++++++++ +|++|+++++|+||+++++|+++|
T Consensus 453 I~S~k~E~~rG~van~V~cYMke~GvSeEeA~~~i~~~Ie~~wK~lN~e~l~~~~-~p~~~~~~~~NlaR~~~~~Y~~~D 531 (554)
T 3g4d_A 453 VAEHKFKHRREDDCSAIECYMEEYGVTAQEAYDVFNKHVESAWKDLNQEFLKPTE-MPTEVLNRSLNLARVMDVLYREGD 531 (554)
T ss_dssp HHHHCC------CCCHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHSSSCS-SCHHHHHHHHHHHHHHHHHSCC--
T ss_pred cchhhhhhccCCccHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCC-CCHHHHHHHHHHHHHHHHHhcCCC
Confidence 6799999999999999999999999999999999999999999999999999878 999999999999999999999999
Q ss_pred CCcCCchhHHHHHHHhcccCcCC
Q 044570 87 GHRHGVQEITKARVLSLIIDPIA 109 (109)
Q Consensus 87 gyt~~~~~~~k~~I~sll~~Pi~ 109 (109)
|||. |+..+|++|++||++|||
T Consensus 532 g~t~-~~~~~k~~i~~ll~~Pi~ 553 (554)
T 3g4d_A 532 GYTY-VGKAAKGGITSLLIEPIA 553 (554)
T ss_dssp ---C-CCHHHHHHHHHHHTCCCC
T ss_pred CCCC-ccHHHHHHHHHHhcCCCC
Confidence 9999 877899999999999996
No 3
>3m00_A Aristolochene synthase; plant terpenoid cyclase, lyase binding domain, (2-CIS, 6-trans)-2-fluorofarnesyl diphospha magnesium, metal-binding; HET: 2CF; 2.10A {Nicotiana tabacum} PDB: 3lz9_A* 3m02_A* 3m01_A* 5eau_A* 1hxa_A* 1hx9_A* 1hxc_A* 5eas_A 1hxg_A 4di5_A* 5eat_A*
Probab=100.00 E-value=6.7e-36 Score=244.67 Aligned_cols=101 Identities=26% Similarity=0.521 Sum_probs=94.0
Q ss_pred eeeehhHHhcCCchhHHHHHHhhcCCCHHHHHHHHHHHHHHHHHhhchhhcCCCCcCcHHHHHHHHHHHhhHhhhcccC-
Q 044570 7 SVAAPDELKRGDVHKSIQCYMHEAGVSEREAREHIHDLIAQTWMKMNRDRFGNPHFVSDVFVGIAMNLARMSQCMYQFG- 85 (109)
Q Consensus 7 i~s~~~E~~rg~~~ssI~cYMke~g~seEeA~~~i~~~ie~~wK~ln~e~l~~~~~~p~~~~~~~~NlaR~~~~~Y~~~- 85 (109)
|+||++|++||+++|+|+|||||||+|+|+|+++|+++|+++||+||++++++++ +|++|+++++|+||+++++|+++
T Consensus 448 I~S~k~E~~rG~vas~V~cYMke~GvSeEeA~~~i~~~Ie~~wK~lN~e~l~~~~-~p~~~~~~~~NlaR~~~~~Y~~~~ 526 (550)
T 3m00_A 448 TATYEVEKSRGQIATGIECCMRDYGISTKEAMAKFQNMAETAWKDINEGLLRPTP-VSTEFLTPILNLARIIEVTYIHNL 526 (550)
T ss_dssp HHSHHHHHHTTCTTSHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTSSSCS-SCGGGTHHHHHHHHHHHHHTSCC-
T ss_pred chhHHHHHhcCCcccHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCC-CCHHHHHHHHHHHHHHHHHhCCCC
Confidence 6899999999999999999999999999999999999999999999999999878 99999999999999999999998
Q ss_pred CCCcCCchhHHHHHHHhcccCcCC
Q 044570 86 EGHRHGVQEITKARVLSLIIDPIA 109 (109)
Q Consensus 86 Dgyt~~~~~~~k~~I~sll~~Pi~ 109 (109)
||||. |+..||++|++||++|||
T Consensus 527 Dg~t~-~~~~~k~~i~~ll~~Pi~ 549 (550)
T 3m00_A 527 DGYTH-PEKVLKPHIINLLVDSIK 549 (550)
T ss_dssp ----C-CHHHHHHHHHHHHTCCCC
T ss_pred CCCCC-ccHHHHHHHHHHhhCCCC
Confidence 99999 877899999999999996
No 4
>1n1b_A (+)-bornyl diphosphate synthase; terpene synthase fold, isomerase; 2.00A {Salvia officinalis} SCOP: a.102.4.1 a.128.1.3 PDB: 1n1z_A* 1n20_A* 1n21_A* 1n22_A* 1n23_A* 1n24_A*
Probab=100.00 E-value=8.6e-35 Score=238.08 Aligned_cols=101 Identities=37% Similarity=0.527 Sum_probs=85.9
Q ss_pred eeeehhHHhcCCchhHHHHHHhhcCCCHHHHHHHHHHHHHHHHHhhchhhcCCCCcCcHHHHHHHHHHHhhHhhhcccCC
Q 044570 7 SVAAPDELKRGDVHKSIQCYMHEAGVSEREAREHIHDLIAQTWMKMNRDRFGNPHFVSDVFVGIAMNLARMSQCMYQFGE 86 (109)
Q Consensus 7 i~s~~~E~~rg~~~ssI~cYMke~g~seEeA~~~i~~~ie~~wK~ln~e~l~~~~~~p~~~~~~~~NlaR~~~~~Y~~~D 86 (109)
|+||++|++||+++|+|+|||||||+|+|+|+++++++|+++||+||++++++++ +|++|+++++|+||+++++|+++|
T Consensus 449 i~S~~~E~~rG~v~n~V~cyMke~g~s~eeA~~~i~~~i~~~wk~ln~e~l~~~~-vp~~~~~~~~n~~R~~~~~Y~~~D 527 (549)
T 1n1b_A 449 LGTSYFELARGDVPKTIQCYMKETNASEEEAVEHVKFLIREAWKDMNTAIAAGYP-FPDGMVAGAANIGRVAQFIYLHGD 527 (549)
T ss_dssp HC---------CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHTCCS-SCHHHHHHHHHHHHHHHHHTTTSC
T ss_pred cchhhhhhccCCccHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCC-CCHHHHHHHHHHHHeeehheeCCC
Confidence 7899999999999999999999999999999999999999999999999999878 999999999999999999999999
Q ss_pred CCcCCchhHHHHHHHhcccCcCC
Q 044570 87 GHRHGVQEITKARVLSLIIDPIA 109 (109)
Q Consensus 87 gyt~~~~~~~k~~I~sll~~Pi~ 109 (109)
|||. |+..+|++|++||++|||
T Consensus 528 g~t~-~~~~~k~~i~~l~~~pi~ 549 (549)
T 1n1b_A 528 GFGV-QHSKTYEHIAGLLFEPYA 549 (549)
T ss_dssp CC-----CHHHHHHHHHHTSCCC
T ss_pred CCCC-CcHHHHHHHHHHhcCCCC
Confidence 9999 777899999999999997
No 5
>2ong_A 4S-limonene synthase; monoterpene synthase, monoterpene cyclase, geranyl diphosphate, 2 fluorogeranyl diphosphate linalyl diphosphate; HET: FPG BTB; 2.70A {Mentha spicata} PDB: 2onh_A*
Probab=100.00 E-value=5.3e-34 Score=233.06 Aligned_cols=101 Identities=40% Similarity=0.680 Sum_probs=97.3
Q ss_pred eeeehhHHhcCCchhHHHHHHhhcCCCHHHHHHHHHHHHHHHHHhhchhh-cCCCCcCcHHHHHHHHHHHhhHhhhcccC
Q 044570 7 SVAAPDELKRGDVHKSIQCYMHEAGVSEREAREHIHDLIAQTWMKMNRDR-FGNPHFVSDVFVGIAMNLARMSQCMYQFG 85 (109)
Q Consensus 7 i~s~~~E~~rg~~~ssI~cYMke~g~seEeA~~~i~~~ie~~wK~ln~e~-l~~~~~~p~~~~~~~~NlaR~~~~~Y~~~ 85 (109)
|+||++|++||+++|+|+|||||||+|+|+|+++++++|+++||+||+++ +++++ +|++|+++++|+||+++++|+++
T Consensus 442 i~S~~~E~~rG~~~n~V~cyMke~g~s~eeA~~~i~~~ie~~wk~ln~e~~l~~~~-vp~~~~~~~~n~aR~~~~~Y~~~ 520 (543)
T 2ong_A 442 LGTSVEEVSRGDVPKSLQCYMSDYNASEAEARKHVKWLIAEVWKKMNAERVSKDSP-FGKDFIGCAVDLGRMAQLMYHNG 520 (543)
T ss_dssp HHSSHHHHHTSCCCCHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHTCSSCS-SCHHHHHHHHHHHHHHHHHTSSC
T ss_pred cchhhhccccCCccHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHhccCCCC-CCHHHHHHHHHHHHeehhheeCC
Confidence 68999999999999999999999999999999999999999999999999 98877 99999999999999999999999
Q ss_pred CCCcCCchhHHHHHHHhcccCcCC
Q 044570 86 EGHRHGVQEITKARVLSLIIDPIA 109 (109)
Q Consensus 86 Dgyt~~~~~~~k~~I~sll~~Pi~ 109 (109)
||||. |+..+|++|++||++|||
T Consensus 521 D~~t~-~~~~~k~~i~~l~~~pi~ 543 (543)
T 2ong_A 521 DGHGT-QHPIIHQQMTRTLFEPFA 543 (543)
T ss_dssp STTSS-SCTTHHHHHHHHHTSCC-
T ss_pred CCCCC-ccHHHHHHHHHHhccCCC
Confidence 99999 777899999999999996
No 6
>3sdr_A Alpha-bisabolene synthase; lyase, terpene synthase; HET: 210; 1.86A {Abies grandis} PDB: 3sdq_A 3sae_A* 3sdt_A* 3sdu_A* 3sdv_A*
Probab=100.00 E-value=8.6e-34 Score=240.42 Aligned_cols=101 Identities=21% Similarity=0.389 Sum_probs=91.8
Q ss_pred eeeehhHHhcCCchhHHHHHHhhc-CCCHHHHHHHHHHHHHHHHHhhchhhcCCCCcCcHHHHHHHHHHHhhHhhhcccC
Q 044570 7 SVAAPDELKRGDVHKSIQCYMHEA-GVSEREAREHIHDLIAQTWMKMNRDRFGNPHFVSDVFVGIAMNLARMSQCMYQFG 85 (109)
Q Consensus 7 i~s~~~E~~rg~~~ssI~cYMke~-g~seEeA~~~i~~~ie~~wK~ln~e~l~~~~~~p~~~~~~~~NlaR~~~~~Y~~~ 85 (109)
|+||++|++||+++|+|+|||||| |+|+|+|+++|+++|+++||+||++++++++ +|++|+++++|++|+++++|+++
T Consensus 715 i~S~k~E~~rG~~assV~cYMke~~gvS~EeA~~~i~~~Ie~~wKeln~e~l~~~~-~p~~~~~~~ln~aR~~~~~Y~~~ 793 (817)
T 3sdr_A 715 TKTYKAEKARGELASSIECYMKDHPECTEEEALDHIYSILEPAVKELTREFLKPDD-VPFACKKMLFEETRVTMVIFKDG 793 (817)
T ss_dssp HHSSCC------CCCHHHHHHHHSTTSCHHHHHHHHHHHHHHHHHHHHHHHHSCCS-SCHHHHHHHHHHHHHHHHHTCSC
T ss_pred chHHHHHHhcCCcchHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHhCCCC-CCHHHHHHHHHHHHHHHHHhcCC
Confidence 679999999999999999999999 7999999999999999999999999999777 99999999999999999999999
Q ss_pred CCCcCCchhHHHHHHHhcccCcCC
Q 044570 86 EGHRHGVQEITKARVLSLIIDPIA 109 (109)
Q Consensus 86 Dgyt~~~~~~~k~~I~sll~~Pi~ 109 (109)
||||. |+.++|++|++||++||+
T Consensus 794 Dg~t~-~~~~~k~~i~~ll~~pi~ 816 (817)
T 3sdr_A 794 DGFGV-SKLEVKDHIKECLIEPLP 816 (817)
T ss_dssp CSSCC-CHHHHHHHHHHHHTCCCC
T ss_pred CCCCC-chHHHHHHHHHHhcCCCC
Confidence 99999 877899999999999996
No 7
>3p5p_A Taxadiene synthase; class I and II terpene cyclase fold, diterpene cyclase, DDXX NSE/DTE motif, 3-azacopalyl diphosphate; HET: A3C; 1.82A {Taxus brevifolia} PDB: 3p5r_A*
Probab=100.00 E-value=1e-33 Score=238.67 Aligned_cols=101 Identities=25% Similarity=0.389 Sum_probs=90.1
Q ss_pred eeeehhHHhcCCchhHHHHHHhhc-CCCHHHHHHHHHHHHHHHHHhhchhhcC-CCCcCcHHHHHHHHHHHhhHhhhccc
Q 044570 7 SVAAPDELKRGDVHKSIQCYMHEA-GVSEREAREHIHDLIAQTWMKMNRDRFG-NPHFVSDVFVGIAMNLARMSQCMYQF 84 (109)
Q Consensus 7 i~s~~~E~~rg~~~ssI~cYMke~-g~seEeA~~~i~~~ie~~wK~ln~e~l~-~~~~~p~~~~~~~~NlaR~~~~~Y~~ 84 (109)
|+||++|++||+++|+|+|||||| |+|+|+|+++|+++|+++||+||+++++ +++ +|++|+++++|+||+++++|++
T Consensus 653 i~S~k~E~~rG~~as~V~cYMke~~gvSeEeA~~~i~~~Ie~~wKeln~e~l~~~~~-~p~~~~~~~~n~aR~~~~~Y~~ 731 (764)
T 3p5p_A 653 TKTYQAEKARGQQASGIACYMKDNPGATEEDAIKHICRVVDRALKEASFEYFKPSND-IPMGCKSFIFNLRLCVQIFYKF 731 (764)
T ss_dssp HHHHHHHHTTTCCCSHHHHHHHHSTTCCHHHHHHHHHHHHHHHHHHHHHHHHSCCSS-SCHHHHHHHHHTHHHHHHHSCC
T ss_pred ccchHHHHhcCCcchHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCC-CCHHHHHHHHHHHHHHHHHhcC
Confidence 679999999999999999999999 8999999999999999999999999997 667 9999999999999999999999
Q ss_pred CCCCcCCchhHHHHHHHhcccCcCC
Q 044570 85 GEGHRHGVQEITKARVLSLIIDPIA 109 (109)
Q Consensus 85 ~Dgyt~~~~~~~k~~I~sll~~Pi~ 109 (109)
+||||. |+..+|++|++||++||+
T Consensus 732 ~Dg~t~-~~~~~k~~i~~ll~~Pi~ 755 (764)
T 3p5p_A 732 IDGYGI-ANEEIKDYIRKVYIDPIQ 755 (764)
T ss_dssp --------CCCHHHHHHHHHTCCCC
T ss_pred CCCCCC-CcHHHHHHHHHHHhcCCc
Confidence 999999 766799999999999985
No 8
>2j5c_A 1,8-cineole synthase; terpene synthases, 1, monoterpene, lyase; 1.95A {Salvia fruticosa}
Probab=99.98 E-value=2.1e-33 Score=230.65 Aligned_cols=100 Identities=40% Similarity=0.652 Sum_probs=80.3
Q ss_pred eeeehhHHhcCCchhHHHHHHhhcCCCHHHHHHHHHHHHHHHHHhhchhhcCCCCcCcHHHHHHHHHHHhhHhhhcccC-
Q 044570 7 SVAAPDELKRGDVHKSIQCYMHEAGVSEREAREHIHDLIAQTWMKMNRDRFGNPHFVSDVFVGIAMNLARMSQCMYQFG- 85 (109)
Q Consensus 7 i~s~~~E~~rg~~~ssI~cYMke~g~seEeA~~~i~~~ie~~wK~ln~e~l~~~~~~p~~~~~~~~NlaR~~~~~Y~~~- 85 (109)
|+||++|++||+++|+|+|||||+|+|+|+|+++|+++|+++||+||+++++ ++ +|++|+++++|+||+++++|+++
T Consensus 469 I~S~~~E~~rG~v~s~V~cyMke~g~s~eeA~~~i~~~ie~~wk~ln~e~l~-~~-vp~~~~~~~~nlaR~~~~~Y~~~~ 546 (569)
T 2j5c_A 469 MGTSLDEVERGDVPKSVQCYMNEKNASEEEAREHVRSLIDQTWKMMNKEMMT-SS-FSKYFVEVSANLARMAQWIYQHES 546 (569)
T ss_dssp HHC----------CCHHHHC------CCHHHHHHHHHHHHHHHHHHHHHHHH-CC-SCHHHHHHHHHHHHHHHHHTGGGS
T ss_pred cchhhhhcccCCccHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhc-cC-CCHHHHHHHHHHHheeehhccCCC
Confidence 6899999999999999999999999999999999999999999999999998 77 99999999999999999999999
Q ss_pred CCCcCCchhHHHHHHHhcccCcCC
Q 044570 86 EGHRHGVQEITKARVLSLIIDPIA 109 (109)
Q Consensus 86 Dgyt~~~~~~~k~~I~sll~~Pi~ 109 (109)
||||. |+..+|++|++||++|||
T Consensus 547 Dg~t~-~~~~~k~~i~~ll~~pi~ 569 (569)
T 2j5c_A 547 DGFGM-QHSLVNKMLRDLLFHRYE 569 (569)
T ss_dssp CTTC--CCCHHHHHHHHHHTSCCC
T ss_pred cCCCC-chHHHHHHHHHHhccCCC
Confidence 99999 777899999999999997
No 9
>3s9v_A Abietadiene synthase, chloroplastic; alpha bundle/barrel, lyase, isomerase; 2.30A {Abies grandis}
Probab=99.97 E-value=2.2e-32 Score=231.03 Aligned_cols=100 Identities=27% Similarity=0.511 Sum_probs=91.6
Q ss_pred eeeehhHHhcCCchhHHHHHHhhc-CCCHHHHHHHHHHHHHHHHHhhchhhcCCCCcCcHHHHHHHHHHHhhHhhhcccC
Q 044570 7 SVAAPDELKRGDVHKSIQCYMHEA-GVSEREAREHIHDLIAQTWMKMNRDRFGNPHFVSDVFVGIAMNLARMSQCMYQFG 85 (109)
Q Consensus 7 i~s~~~E~~rg~~~ssI~cYMke~-g~seEeA~~~i~~~ie~~wK~ln~e~l~~~~~~p~~~~~~~~NlaR~~~~~Y~~~ 85 (109)
|+||++|++||+++|+|+|||||| |+|+|+|+++|+++|+++||+||++++++ . +|++|+++++|++|+++++|+++
T Consensus 684 i~S~k~E~~rG~~as~V~cYMke~~gvSeEeA~~~i~~~Ie~~wKeln~e~l~~-~-~p~~~~~~~~n~aR~~~~~Y~~~ 761 (785)
T 3s9v_A 684 TKTYQAERGQGEVASAIQCYMKDHPKISEEEALQHVYSVMENALEELNREFVNN-K-IPDIYKRLVFETARIMQLFYMQG 761 (785)
T ss_dssp HHHHHHHHHHSCCCSHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHS-C-CCHHHHHHHHHHHHHHHHHTCCC
T ss_pred cchhhHHHhcCCcchHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHhcC-C-CCHHHHHHHHHHHHHHHHHhcCC
Confidence 679999999999999999999999 99999999999999999999999999985 4 99999999999999999999999
Q ss_pred CCCcCCchh-HHHHHHHhcccCcCC
Q 044570 86 EGHRHGVQE-ITKARVLSLIIDPIA 109 (109)
Q Consensus 86 Dgyt~~~~~-~~k~~I~sll~~Pi~ 109 (109)
||||. |+. .+|++|++||++||.
T Consensus 762 Dg~t~-~~~~~~k~~i~~ll~~Pi~ 785 (785)
T 3s9v_A 762 DGLTL-SHDMEIKEHVKNCLFQPVA 785 (785)
T ss_dssp C-----CHHHHHHHHHHHHHTSCCC
T ss_pred CCCCC-CChHHHHHHHHHHhcccCC
Confidence 99999 765 799999999999984
No 10
>1ps1_A Pentalenene synthase; antibiotic biosynthesis, sesquiterpene cyclase, lyase; 2.60A {Streptomyces SP} SCOP: a.128.1.4 PDB: 1hm7_A 1hm4_A
Probab=99.42 E-value=1.8e-13 Score=104.10 Aligned_cols=50 Identities=14% Similarity=0.151 Sum_probs=48.7
Q ss_pred eeeehhHHhcCCchhHHHHHHhhcCCCHHHHHHHHHHHHHHHHHhhchhh
Q 044570 7 SVAAPDELKRGDVHKSIQCYMHEAGVSEREAREHIHDLIAQTWMKMNRDR 56 (109)
Q Consensus 7 i~s~~~E~~rg~~~ssI~cYMke~g~seEeA~~~i~~~ie~~wK~ln~e~ 56 (109)
|.||++|+++|+++|+|+|||+++|+|+|+|+++++++|+++||++|++.
T Consensus 221 l~S~~kE~~~G~~~n~V~~~m~~~g~s~eeA~~~v~~~i~~~~~~~~~~~ 270 (337)
T 1ps1_A 221 IASLEKEEARGEQNNMVMILRREHGWSKSRSVSHMQNEVRARLEQYLLLE 270 (337)
T ss_dssp HHTHHHHHHTTCCCSHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhHHHHHhcCCcchHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999987
No 11
>3kb9_A EPI-isozizaene synthase; terpenoid cyclase, alpha-helical fold, farnesyl diphosphate, metal-binding, lyase, magnesium; HET: BTM; 1.60A {Streptomyces coelicolor} PDB: 3kbk_A 3lgk_A 3lg5_A*
Probab=99.29 E-value=1.8e-12 Score=101.34 Aligned_cols=50 Identities=12% Similarity=0.146 Sum_probs=47.6
Q ss_pred eeeehhHHhcCCchhHHHHHHhhcCCCHHHHHHHHHHHHHHHHHhhchhh
Q 044570 7 SVAAPDELKRGDVHKSIQCYMHEAGVSEREAREHIHDLIAQTWMKMNRDR 56 (109)
Q Consensus 7 i~s~~~E~~rg~~~ssI~cYMke~g~seEeA~~~i~~~ie~~wK~ln~e~ 56 (109)
|.||++|+++|+++|+|+|||+++|+|+|+|+++++++|+++||++|+..
T Consensus 263 i~S~~kE~~~G~~~N~V~~~m~~~g~s~eeA~~~v~~~i~~~~k~~~~~~ 312 (382)
T 3kb9_A 263 LCSLPKEIAGDEVHNLGISLITHHSLTLEEAIGEVRRRVEECITEFLAVE 312 (382)
T ss_dssp HHHHHHHHHTTCCCSHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCcccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57999999999999999999999999999999999999999999999853
No 12
>1di1_A Aristolochene synthase; sesquiterpene cyclase, isoprenoid biosynthesis, lyase; 2.50A {Penicillium roqueforti} SCOP: a.128.1.4 PDB: 1dgp_A
Probab=99.27 E-value=1.4e-12 Score=97.43 Aligned_cols=50 Identities=4% Similarity=-0.008 Sum_probs=45.8
Q ss_pred eeeehhHHhcCC--------chhHHHHHHhhcCCCHHHHHHHHHHHHHHHHHhhchhh
Q 044570 7 SVAAPDELKRGD--------VHKSIQCYMHEAGVSEREAREHIHDLIAQTWMKMNRDR 56 (109)
Q Consensus 7 i~s~~~E~~rg~--------~~ssI~cYMke~g~seEeA~~~i~~~ie~~wK~ln~e~ 56 (109)
|.||++|+++|+ ++|+|+|||+++|+|+|+|+++++++|+++||++|+..
T Consensus 207 l~S~~kE~~~g~~~h~~~~~~~n~V~~~m~~~g~s~eeA~~~~~~~i~~~~~~~~~~~ 264 (300)
T 1di1_A 207 IYSYDKEEEASRTGHKEGAFLCSAVKVLAEESKLGIPATKRVLWSMTREWETVHDEIV 264 (300)
T ss_dssp HHHTTTTCCC----------CCCHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHhhccccccccccchhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 679999999999 78999999999999999999999999999999999875
No 13
>3bny_A Aristolochene synthase; sesquiterpene cyclase, isoprenoid, farnesyl diphosphate, magnesium, cyclization, lyase; HET: FPF; 1.89A {Aspergillus terreus} PDB: 2e4o_A 2oa6_A* 3bnx_A* 3cke_A*
Probab=99.13 E-value=2.1e-11 Score=92.04 Aligned_cols=50 Identities=16% Similarity=0.113 Sum_probs=44.5
Q ss_pred eeeehhHHhcCC--------chhHHHHHHhhcCCCHHHHHHHHHHHHHHHHHhhchhh
Q 044570 7 SVAAPDELKRGD--------VHKSIQCYMHEAGVSEREAREHIHDLIAQTWMKMNRDR 56 (109)
Q Consensus 7 i~s~~~E~~rg~--------~~ssI~cYMke~g~seEeA~~~i~~~ie~~wK~ln~e~ 56 (109)
|.||++|+++|+ ++|+|+|||+++|+|+|+|+++++++|++.|+++|+..
T Consensus 221 l~S~~kE~~~g~~~~~~~~~~~N~V~~~m~~~g~s~eeA~~~~~~~i~~~~~~~~~l~ 278 (320)
T 3bny_A 221 IYSYEKELYTSKTAHSEGGILCTSVQILAQEADVTAEAAKRVLFVMCREWELRHQLLV 278 (320)
T ss_dssp HHHHHHHCC-----------CCSHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhHHHHHhhcccccccccccchHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 679999999998 78999999999999999999999999999999999865
No 14
>3v1v_A 2-MIB synthase, 2-methylisoborneol synthase; class I terpenoid cyclase fold, DDXXXXD motif, NDXXSXXXE MOT methylisoborneol biosynthesis; HET: GST; 1.80A {Streptomyces coelicolor} PDB: 3v1x_A*
Probab=98.86 E-value=1.4e-09 Score=86.82 Aligned_cols=50 Identities=12% Similarity=0.055 Sum_probs=45.4
Q ss_pred eeeehhHHhc-CCchhHHHHHHhhcCCCHHHHHHHHHHHHHHHHHhhchhh
Q 044570 7 SVAAPDELKR-GDVHKSIQCYMHEAGVSEREAREHIHDLIAQTWMKMNRDR 56 (109)
Q Consensus 7 i~s~~~E~~r-g~~~ssI~cYMke~g~seEeA~~~i~~~ie~~wK~ln~e~ 56 (109)
|.||++|+++ |++.|+|+|||+++|+|+|+|++++.++|++.+++..+..
T Consensus 340 I~Sy~kE~~~gg~~~N~V~~~mke~g~S~eeA~~~v~~~i~~~~~~F~~~~ 390 (433)
T 3v1v_A 340 LYSYTKELNSPGRHLNLPVVIAEREQLCERDAYLKAVEVHNELQHSFEAAA 390 (433)
T ss_dssp HHSHHHHTTSSSCCCCHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCCcHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6799999999 5788999999999999999999999999999999876553
No 15
>3pya_A ENT-copalyl diphosphate synthase, chloroplastic; class I and II terpene cyclase fold, class II diterpene CYCL DXXDD motif; HET: AG8 1PE; 2.25A {Arabidopsis thaliana} PDB: 3pyb_A*
Probab=98.57 E-value=2.1e-08 Score=84.47 Aligned_cols=61 Identities=8% Similarity=0.147 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHHHHhhchhhcCCC--CcCcHHHHHHHHHHHhhHhhhcccCCCCcCCchhHHHHHHHhcccCcC
Q 044570 37 AREHIHDLIAQTWMKMNRDRFGNP--HFVSDVFVGIAMNLARMSQCMYQFGEGHRHGVQEITKARVLSLIIDPI 108 (109)
Q Consensus 37 A~~~i~~~ie~~wK~ln~e~l~~~--~~~p~~~~~~~~NlaR~~~~~Y~~~Dgyt~~~~~~~k~~I~sll~~Pi 108 (109)
..+++++.||..|++|++.+|+++ . +|++| |+.++++.||.. ||++ | + |..||.++|++|+
T Consensus 657 ~~~~~~~~IE~~mqEL~~lVl~~~~~~-ip~~~-----tf~~V~ksFYy~--ay~~-p-~-i~~hI~kVl~~~~ 719 (727)
T 3pya_A 657 EKEKTIKSMEKEMGKMVELALSESDTF-RDVSI-----TFLDVAKAFYYF--ALCG-D-H-LQTHISKVLFQKV 719 (727)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCCTTT-HHHHH-----HHHHHHHHHHHH--HHHT-T-S-CHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCC-CCCcc-----cHHHHHHHHHhh--hcCC-H-H-HHHHHHHHHcCcc
Confidence 377999999999999999999754 5 99999 899999999986 9998 6 5 9999999999997
No 16
>1yyq_A Trichodiene synthase; terpenoid cyclase fold, site-directed mutant, pyrophosphate, lyase; 2.10A {Fusarium sporotrichioides} PDB: 1yj4_A 1yyr_A* 1yys_A* 1jfa_A 1jfg_A 2q9y_A* 2q9z_A 2ael_A* 2aek_A* 2aet_A 2ps7_A 2ps8_A 1kiy_A 1kiz_A 1yyt_A* 1yyu_A* 2ps5_A 2ps4_A 2ps6_A
Probab=89.89 E-value=0.3 Score=37.98 Aligned_cols=67 Identities=13% Similarity=0.106 Sum_probs=50.3
Q ss_pred eeeehhHHh-cCCchhHHHHHHhhcCCCHHHHHHHHHHHHHHHHHhhchhhcCCCCcCcHHHHHHHHHHHhh
Q 044570 7 SVAAPDELK-RGDVHKSIQCYMHEAGVSEREAREHIHDLIAQTWMKMNRDRFGNPHFVSDVFVGIAMNLARM 77 (109)
Q Consensus 7 i~s~~~E~~-rg~~~ssI~cYMke~g~seEeA~~~i~~~ie~~wK~ln~e~l~~~~~~p~~~~~~~~NlaR~ 77 (109)
|.||.+|.. .|+..|.|..++.++|+|.++|.+++..++...-..+-+ .|.+ . .|. +++.+-+..|-
T Consensus 227 IlSf~KE~~~~Gd~~NlV~vl~~~~g~S~~eAl~~v~~~~~~~~~r~~~-~L~~-~-~~~-~l~al~~~irG 294 (374)
T 1yyq_A 227 LMSFYKEFDDERDQISLVKNYVVSDEISLHEALEKLTQDTLHSSKQMVA-VFSD-K-DPQ-VMDTIECFMHG 294 (374)
T ss_dssp HHHHHHHTTCSSCCCCHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHH-HHSS-S-CHH-HHHHHHHHHHH
T ss_pred hhccchhhhccCCccchhhhehhcCCCCHHHHHHHHHHHHHHHHHHHHH-Hhcc-C-CHH-HHHHHHHHHhH
Confidence 568888987 499999999999999999999999999999888777754 3332 2 343 44555555553
No 17
>3fau_A NEDD4-binding protein 2; SMR, small-MUTS related domain, nicking endonuclease, alternative splicing, ATP-binding, coiled coil, cytoplasm, hydrolase; 1.90A {Homo sapiens} SCOP: d.68.8.1
Probab=72.64 E-value=3.9 Score=24.48 Aligned_cols=22 Identities=23% Similarity=0.330 Sum_probs=20.0
Q ss_pred cCCCHHHHHHHHHHHHHHHHHh
Q 044570 30 AGVSEREAREHIHDLIAQTWMK 51 (109)
Q Consensus 30 ~g~seEeA~~~i~~~ie~~wK~ 51 (109)
||.+.+||+..+...+++++..
T Consensus 6 HGl~v~eA~~~l~~~l~~~~~~ 27 (82)
T 3fau_A 6 HGLHVDEALEHLMRVLEKKTEE 27 (82)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHHHHH
Confidence 6999999999999999999863
No 18
>1tr8_A Conserved protein (MTH177); chaperones, nascent polypeptide-associated complex, ribosome domain, ubiquitin, chaperone; 2.27A {Methanothermobacter marburgensis}
Probab=59.82 E-value=7.8 Score=24.76 Aligned_cols=27 Identities=19% Similarity=0.332 Sum_probs=22.5
Q ss_pred CCchhHHHHHHhhcCCCHHHHHHHHHH
Q 044570 17 GDVHKSIQCYMHEAGVSEREAREHIHD 43 (109)
Q Consensus 17 g~~~ssI~cYMke~g~seEeA~~~i~~ 43 (109)
|=-..-|+.-|.+.|+|.++|++.+++
T Consensus 63 ~i~~edi~lv~~q~~vs~~~A~~aL~~ 89 (102)
T 1tr8_A 63 EIPEDDIELVMNQTGASREDATRALQE 89 (102)
T ss_dssp CCCHHHHHHHHHHHCCCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 444578999999999999999988764
No 19
>4evx_A Putative phage endolysin; structural genomics, PSI-biology, program for the characteri secreted effector proteins, pcsep; HET: MLY MSE; 1.70A {Salmonella enterica subsp}
Probab=58.50 E-value=31 Score=21.57 Aligned_cols=42 Identities=5% Similarity=0.065 Sum_probs=31.5
Q ss_pred CCCHHHHHHHHHHHHHHHHHhhchhhcCCCCcCcH----HHHHHHHHHH
Q 044570 31 GVSEREAREHIHDLIAQTWMKMNRDRFGNPHFVSD----VFVGIAMNLA 75 (109)
Q Consensus 31 g~seEeA~~~i~~~ie~~wK~ln~e~l~~~~~~p~----~~~~~~~Nla 75 (109)
.+|+++|..-+..-+...-+.+++.+ . .+ +++ +++.+++|+.
T Consensus 49 ~iT~~ea~~ll~~dl~~~~~~v~~~v-~-v~-l~q~q~dALvSf~yNvG 94 (106)
T 4evx_A 49 FITPDQAEAFLLDDLNSCDILLQNCL-P-EL-NDRFQRETLIALMFSIG 94 (106)
T ss_dssp BCCHHHHHHHHHHHHHHHHHHHHHHS-T-TC-CCHHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHhC-C-CC-CCHHHHHHHHHHhHhCC
Confidence 68999999999999999999988764 2 34 665 4555555554
No 20
>1fc3_A SPO0A; response regulator, signaling protein; 2.00A {Geobacillus stearothermophilus} SCOP: a.4.6.3 PDB: 1lq1_A
Probab=57.14 E-value=32 Score=22.40 Aligned_cols=48 Identities=15% Similarity=0.309 Sum_probs=33.2
Q ss_pred hhcCCCHHHHHHHHHHHHHHHHHhhchhh----c-------CCCCcCcHHHHHHHHHHHh
Q 044570 28 HEAGVSEREAREHIHDLIAQTWMKMNRDR----F-------GNPHFVSDVFVGIAMNLAR 76 (109)
Q Consensus 28 ke~g~seEeA~~~i~~~ie~~wK~ln~e~----l-------~~~~~~p~~~~~~~~NlaR 76 (109)
+.||+|...-.+.|+..|+.+|..=|.+. + +..| =+..|+..+.+--|
T Consensus 56 ~k~~TT~s~VEraIR~aIe~aw~~g~~~~l~~ifg~t~~~~~~kP-TnsEFI~~iad~Lr 114 (120)
T 1fc3_A 56 KKYNTTASRVERAIRHAIEVAWSRGNLESISSLFGYTVSVSKAKP-TNSEFIAMVADKLR 114 (120)
T ss_dssp HHHTSCHHHHHHHHHHHHHHHHHSSCTTTTHHHHCHHHHTCSSCC-CHHHHHHHHHHHHH
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCcccCCCCC-CHHHHHHHHHHHHH
Confidence 46799999999999999999997633332 2 2334 45667777666554
No 21
>2d9i_A NEDD4-binding protein 2; SMR domain, N4BP2, BCL-3 binding protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.68.8.1
Probab=56.48 E-value=11 Score=23.11 Aligned_cols=21 Identities=24% Similarity=0.327 Sum_probs=19.0
Q ss_pred cCCCHHHHHHHHHHHHHHHHH
Q 044570 30 AGVSEREAREHIHDLIAQTWM 50 (109)
Q Consensus 30 ~g~seEeA~~~i~~~ie~~wK 50 (109)
||.+.+||+..+...|+++..
T Consensus 14 HGl~v~eA~~~L~~~L~~~~~ 34 (96)
T 2d9i_A 14 HGLHVDEALEHLMRVLEKKTE 34 (96)
T ss_dssp TTSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHH
Confidence 699999999999999998863
No 22
>2zqe_A MUTS2 protein; alpha/beta, ATP-binding, DNA-binding, nucleotide-binding, DN protein; 1.70A {Thermus thermophilus}
Probab=54.41 E-value=14 Score=22.27 Aligned_cols=22 Identities=14% Similarity=0.185 Sum_probs=19.9
Q ss_pred cCCCHHHHHHHHHHHHHHHHHh
Q 044570 30 AGVSEREAREHIHDLIAQTWMK 51 (109)
Q Consensus 30 ~g~seEeA~~~i~~~ie~~wK~ 51 (109)
||.+.+||+..+...|+++...
T Consensus 10 hG~~~~eA~~~l~~fl~~a~~~ 31 (83)
T 2zqe_A 10 RGLTVAEALLEVDQALEEARAL 31 (83)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHHHHHC
Confidence 5899999999999999999853
No 23
>4akk_A Nitrate regulatory protein; transcription; 2.14A {Klebsiella oxytoca}
Probab=50.78 E-value=8.6 Score=29.92 Aligned_cols=35 Identities=17% Similarity=0.230 Sum_probs=27.5
Q ss_pred cCCchhHHHHHHhhcCCCHHHHHHHHHHHHHHHHH
Q 044570 16 RGDVHKSIQCYMHEAGVSEREAREHIHDLIAQTWM 50 (109)
Q Consensus 16 rg~~~ssI~cYMke~g~seEeA~~~i~~~ie~~wK 50 (109)
|.-+.-|.-+-|+.+|+||++|.+.|++.--+...
T Consensus 367 r~~i~~Akg~lm~~~~~~e~~A~~~l~~~sm~~~~ 401 (423)
T 4akk_A 367 RKLIEKAKSVLMTYQGMQEEQAWQALRKMAMDKNQ 401 (423)
T ss_dssp HHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTC
T ss_pred hhHHHHHHHHHHHhhCcCHHHHHHHHHHHHHHcCC
Confidence 34456677788999999999999999987665543
No 24
>1xri_A AT1G05000; structural genomics, protein structure initiative, CESG for eukaryotic structural genomics, phosphoprote phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1 PDB: 2q47_A
Probab=49.19 E-value=14 Score=23.72 Aligned_cols=27 Identities=4% Similarity=-0.025 Sum_probs=21.9
Q ss_pred CchhHHHHHHhhcCCCHHHHHHHHHHH
Q 044570 18 DVHKSIQCYMHEAGVSEREAREHIHDL 44 (109)
Q Consensus 18 ~~~ssI~cYMke~g~seEeA~~~i~~~ 44 (109)
-.+..+-|||+..|+|.++|.+.++..
T Consensus 105 RTg~~~a~~l~~~g~~~~~a~~~~~~~ 131 (151)
T 1xri_A 105 RTGCLVGCLRKLQKWCLTSIFDEYQRF 131 (151)
T ss_dssp HHHHHHHHHHHHTTBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHh
Confidence 346777899998899999999887754
No 25
>3s4o_A Protein tyrosine phosphatase-like protein; structural genomics, medical structural genomics of pathogen protozoa, MSGPP, unknown function; HET: MSE EPE; 2.30A {Leishmania major}
Probab=47.35 E-value=17 Score=23.31 Aligned_cols=27 Identities=22% Similarity=0.180 Sum_probs=22.0
Q ss_pred CCchhHHHHHHhhc-CCCHHHHHHHHHH
Q 044570 17 GDVHKSIQCYMHEA-GVSEREAREHIHD 43 (109)
Q Consensus 17 g~~~ssI~cYMke~-g~seEeA~~~i~~ 43 (109)
|-.+..+-||+... |++.++|.+.+++
T Consensus 121 ~RTg~~~a~~L~~~~~~~~~~a~~~vr~ 148 (167)
T 3s4o_A 121 GRAPILVALALVEYGNVSALDAIALIRE 148 (167)
T ss_dssp SHHHHHHHHHHHHTTCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 44567788998888 9999999988764
No 26
>3rz2_A Protein tyrosine phosphatase type IVA 1; tyrosine phosphatase, dual specific phosphatase, COMP with peptide, hydrolase; 2.80A {Rattus norvegicus} PDB: 1x24_A 1zcl_A
Probab=46.99 E-value=16 Score=24.57 Aligned_cols=28 Identities=18% Similarity=0.233 Sum_probs=22.1
Q ss_pred cCCchhHHHHHHhhcCCCHHHHHHHHHH
Q 044570 16 RGDVHKSIQCYMHEAGVSEREAREHIHD 43 (109)
Q Consensus 16 rg~~~ssI~cYMke~g~seEeA~~~i~~ 43 (109)
.|-.+..+-||+...|++.++|++.++.
T Consensus 128 ~gRSg~~va~~L~~~g~~~~~a~~~vr~ 155 (189)
T 3rz2_A 128 LGRAPVLVALALIEGGMKYEDAVQFIRQ 155 (189)
T ss_dssp STTHHHHHHHHHHTTTCCHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 3556788899999889999999876653
No 27
>3ic3_A Putative pyruvate dehydrogenase; structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE BGC; 1.80A {Rhodopseudomonas palustris}
Probab=44.06 E-value=35 Score=21.82 Aligned_cols=26 Identities=27% Similarity=0.415 Sum_probs=20.2
Q ss_pred HHHHHhhcCCCHHHHHHHHHHHHHHH
Q 044570 23 IQCYMHEAGVSEREAREHIHDLIAQT 48 (109)
Q Consensus 23 I~cYMke~g~seEeA~~~i~~~ie~~ 48 (109)
...|-+++|+|+++|++.|.+..+..
T Consensus 61 A~a~a~~~~~s~~eal~rI~egF~~E 86 (101)
T 3ic3_A 61 ARSYARESEYTEDEALERIVEMFEAE 86 (101)
T ss_dssp HHHHHHTSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence 35567888999999999888765543
No 28
>3qd7_X Uncharacterized protein YDAL; alpha/beta/alpha fold, endonuclease, hydrolase; 2.30A {Escherichia coli}
Probab=43.20 E-value=24 Score=23.39 Aligned_cols=22 Identities=18% Similarity=0.238 Sum_probs=20.3
Q ss_pred cCCCHHHHHHHHHHHHHHHHHh
Q 044570 30 AGVSEREAREHIHDLIAQTWMK 51 (109)
Q Consensus 30 ~g~seEeA~~~i~~~ie~~wK~ 51 (109)
||.+.+||+..+...|.++...
T Consensus 53 HG~~~~EA~~~L~~fL~~a~~~ 74 (137)
T 3qd7_X 53 LRQPVEECRKMVFSFIQQALAD 74 (137)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHHHHHC
Confidence 6999999999999999999864
No 29
>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine phosphatase, hydrolase; 1.26A {Homo sapiens}
Probab=41.97 E-value=27 Score=22.19 Aligned_cols=26 Identities=8% Similarity=0.045 Sum_probs=20.1
Q ss_pred chhHHHHHHhh-cCCCHHHHHHHHHHH
Q 044570 19 VHKSIQCYMHE-AGVSEREAREHIHDL 44 (109)
Q Consensus 19 ~~ssI~cYMke-~g~seEeA~~~i~~~ 44 (109)
.++.+-+|+-. .|.|.++|.+.++..
T Consensus 95 S~~~v~ayLm~~~~~~~~~A~~~v~~~ 121 (144)
T 3s4e_A 95 AAAIVIGFLMNSEQTSFTSAFSLVKNA 121 (144)
T ss_dssp HHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 35667788766 499999999888764
No 30
>3mtu_A Tropomyosin alpha-1 chain, microtubule-associated RP/EB family member 1; tropomysoin, overlap complex, coiled-coils, contractIle PROT; HET: MSE; 2.10A {Gallus gallus} PDB: 3mud_C*
Probab=41.80 E-value=14 Score=22.19 Aligned_cols=18 Identities=28% Similarity=0.412 Sum_probs=15.4
Q ss_pred HHhhHhhhcccCCCCcCCc
Q 044570 74 LARMSQCMYQFGEGHRHGV 92 (109)
Q Consensus 74 laR~~~~~Y~~~Dgyt~~~ 92 (109)
+.|+..++|...|||.. |
T Consensus 57 ~~~I~~ILYat~~~f~~-p 74 (75)
T 3mtu_A 57 LQRIVDILYATDEGFVI-P 74 (75)
T ss_dssp HHHHHHHHHCBTTBCSS-C
T ss_pred HHHHHHHHhccCcCCCC-C
Confidence 35788899999999997 5
No 31
>1rxd_A Protein tyrosine phosphatase type IVA, member 1; protein tyrosine phosphatase IVA1...; structural genomics, NYSGXRC, unknown function, PSI; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1xm2_A 1zck_A 1r6h_A 1v3a_A
Probab=40.89 E-value=25 Score=22.27 Aligned_cols=27 Identities=19% Similarity=0.268 Sum_probs=21.3
Q ss_pred CCchhHHHHHHhhcCCCHHHHHHHHHH
Q 044570 17 GDVHKSIQCYMHEAGVSEREAREHIHD 43 (109)
Q Consensus 17 g~~~ssI~cYMke~g~seEeA~~~i~~ 43 (109)
|-.+..+-+|+...|++.++|.+.++.
T Consensus 108 ~Rtg~~~a~~l~~~~~~~~~a~~~vr~ 134 (159)
T 1rxd_A 108 GRAPVLVALALIEGGMKYEDAVQFIRQ 134 (159)
T ss_dssp TTHHHHHHHHHHHTTCCHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 455677788888889999999877654
No 32
>1yn9_A BVP, polynucleotide 5'-phosphatase; RNA triphosphatase, cysteine phosphatase, P-loop, hydrolase; HET: PO4; 1.50A {Autographa californicanucleopolyhedrovirus}
Probab=40.69 E-value=15 Score=24.09 Aligned_cols=25 Identities=16% Similarity=0.304 Sum_probs=20.6
Q ss_pred chhHHHHHHhh-cCCCHHHHHHHHHH
Q 044570 19 VHKSIQCYMHE-AGVSEREAREHIHD 43 (109)
Q Consensus 19 ~~ssI~cYMke-~g~seEeA~~~i~~ 43 (109)
.+..+-||+.. .|+|.++|++.++.
T Consensus 127 Tg~~va~~L~~~~~~~~~~a~~~~r~ 152 (169)
T 1yn9_A 127 TGYMVCRYLMHTLGIAPQEAIDRFEK 152 (169)
T ss_dssp HHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 46778899998 59999999987764
No 33
>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase, nucleus; 2.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1m3g_A
Probab=39.19 E-value=17 Score=23.11 Aligned_cols=25 Identities=20% Similarity=0.161 Sum_probs=19.5
Q ss_pred chhHHHHHHhh-cCCCHHHHHHHHHH
Q 044570 19 VHKSIQCYMHE-AGVSEREAREHIHD 43 (109)
Q Consensus 19 ~~ssI~cYMke-~g~seEeA~~~i~~ 43 (109)
.++.+-+|+-. .|.|.++|.+++++
T Consensus 95 S~~~~~aylm~~~~~~~~~A~~~v~~ 120 (144)
T 3ezz_A 95 SATICLAYLMMKKRVRLEEAFEFVKQ 120 (144)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHHHHT
T ss_pred hHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 45667788766 49999999988763
No 34
>4aqn_A Pesticin; toxin, bacteriocin, colicin, three domains, muramidase; 1.98A {Yersinia pestis} PDB: 4epf_A 4arm_B 4arl_A 4arm_A 4arq_B 4arp_A 4arq_A
Probab=37.60 E-value=65 Score=24.94 Aligned_cols=61 Identities=15% Similarity=0.077 Sum_probs=38.9
Q ss_pred hHHHHHHhhc--CCCHHHH-------HHHHHHHHHHHHHhhchhhcCCCCcCcHHHHHHHHHHHhhHhhhcccCCCCcC
Q 044570 21 KSIQCYMHEA--GVSEREA-------REHIHDLIAQTWMKMNRDRFGNPHFVSDVFVGIAMNLARMSQCMYQFGEGHRH 90 (109)
Q Consensus 21 ssI~cYMke~--g~seEeA-------~~~i~~~ie~~wK~ln~e~l~~~~~~p~~~~~~~~NlaR~~~~~Y~~~Dgyt~ 90 (109)
.|.. +++++ .+|.++| ..+....+...|..-|... .-.. +|..+..+++.+ .|++|.+++.
T Consensus 239 ~A~~-~L~~~pLtIT~dEA~~L~~av~~~y~~kl~~~Yd~an~g~-~F~d-LPpe~QTVLvSL------~YQyGs~Lss 308 (357)
T 4aqn_A 239 EAYD-KVRTAPLTLSDNEAHLLSNIYIDKFSHKIEGLFNDANIGL-RFSD-LPLRTRTALVSI------GYQKGFKLSR 308 (357)
T ss_dssp HHHH-HHHHSCCBCCHHHHHHHHHHHHHHHHHHHHHHHHHTCCSS-CGGG-SCHHHHHHHHHH------HHHHCSCHHH
T ss_pred HHHH-HHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcccCC-Chhh-CCHHHhhHhhhh------hhhcCCCccc
Confidence 4443 45566 4788888 4445566666777665331 1134 999988887655 5999987653
No 35
>3v2l_A AGAP005208-PA; odorant binding olfaction, general odorant binding protein, transport, secreted, odorant-binding protein; HET: PG4; 1.80A {Anopheles gambiae} PDB: 4f7f_A* 3vb1_A
Probab=36.65 E-value=24 Score=21.65 Aligned_cols=56 Identities=7% Similarity=0.005 Sum_probs=27.7
Q ss_pred CCCHHHHHHHHHHHHHHHHH----hhchhhcCCCCcCcHHHHHHHHHHHhhHhhhcccCCCCcC
Q 044570 31 GVSEREAREHIHDLIAQTWM----KMNRDRFGNPHFVSDVFVGIAMNLARMSQCMYQFGEGHRH 90 (109)
Q Consensus 31 g~seEeA~~~i~~~ie~~wK----~ln~e~l~~~~~~p~~~~~~~~NlaR~~~~~Y~~~Dgyt~ 90 (109)
|...+.+++.+..++.+..+ ++...|..........| .+++ ++..++|+.+.-|..
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~d~C-e~A~---~~~~C~~~~~p~~~F 119 (120)
T 3v2l_A 60 KLNYDASVKQIDTIMPDELAGPMRAALDICRTVADGIKNNC-DAAY---VLLQCLSKNNPKFIF 119 (120)
T ss_dssp EECHHHHHHHHHHHSCHHHHHHHHHHHHHTTTTTTTCCSHH-HHHH---HHHHHHHHTCTTCCC
T ss_pred CccHHHHHHHHHHhccchhHHHHHHHHHHhhccCCCCCCHH-HHHH---HHHHHHHHhCCCccC
Confidence 34567777777665543333 33344432111011233 3333 456788887765554
No 36
>2c46_A MRNA capping enzyme; phosphatase, transferase, hydrolase, mRNA processing, multifunctional enzyme, nucleotidyltransferase; 1.6A {Homo sapiens} PDB: 1i9s_A 1i9t_A
Probab=35.66 E-value=40 Score=23.97 Aligned_cols=26 Identities=15% Similarity=0.037 Sum_probs=20.7
Q ss_pred CchhHHHHHHhhc-CCCHHHHHHHHHH
Q 044570 18 DVHKSIQCYMHEA-GVSEREAREHIHD 43 (109)
Q Consensus 18 ~~~ssI~cYMke~-g~seEeA~~~i~~ 43 (109)
-.+..|-|||-.. |+|.++|++.++.
T Consensus 154 RTGt~ia~yLm~~~~~s~~eAi~~vr~ 180 (241)
T 2c46_A 154 RTGFLICAFLVEKMDWSIEAAVATFAQ 180 (241)
T ss_dssp HHHHHHHHHHHHTTCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 3467888998774 9999999988764
No 37
>1nkz_B Light-harvesting protein B-800/850, beta chain; light harvesting complex II, trans-membrane helices, rhodopi glucoside; HET: CXM RG1 BOG BCL; 2.00A {Rhodoblastus acidophilus} SCOP: f.3.1.1 PDB: 1kzu_B* 2fkw_B* 1ijd_B*
Probab=34.82 E-value=50 Score=17.64 Aligned_cols=16 Identities=6% Similarity=0.391 Sum_probs=10.9
Q ss_pred CCCHHHHHHHHHHHHHH
Q 044570 31 GVSEREAREHIHDLIAQ 47 (109)
Q Consensus 31 g~seEeA~~~i~~~ie~ 47 (109)
|.|+|||. ++.++.-.
T Consensus 2 gLT~~EA~-EfH~~~~~ 17 (41)
T 1nkz_B 2 TLTAEQSE-ELHKYVID 17 (41)
T ss_dssp CCCHHHHH-HHHHHHHH
T ss_pred CCCHHHHH-HHHHHHHH
Confidence 78999998 55554443
No 38
>3hdf_A Lysozyme; antimicrobial, bacteriolytic enzyme, glycosid hydrolase, late protein; 1.70A {Enterobacteria phage P21}
Probab=34.62 E-value=95 Score=20.22 Aligned_cols=36 Identities=11% Similarity=0.158 Sum_probs=27.6
Q ss_pred CCCHHHHHHHHHHHHHHHHHhhchhhcCCCCcCcHHHHH
Q 044570 31 GVSEREAREHIHDLIAQTWMKMNRDRFGNPHFVSDVFVG 69 (109)
Q Consensus 31 g~seEeA~~~i~~~ie~~wK~ln~e~l~~~~~~p~~~~~ 69 (109)
.+|+++|..-+..-+...-+.+++.+ . .+ +|+.-.+
T Consensus 40 ~iT~~ea~~ll~~dl~~~~~~v~~~v-~-~~-l~q~q~d 75 (140)
T 3hdf_A 40 TYTKAECKALLNKDLATVARQINPYI-K-VD-IPETMRG 75 (140)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHGGGC-C-SC-CCHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHhc-c-cc-CCHHHHH
Confidence 68999999999999999999988754 2 34 6654333
No 39
>2hxp_A Dual specificity protein phosphatase 9; human phosphatase, structural genomics, PSI-2, protein structure initiative; 1.83A {Homo sapiens} PDB: 3lj8_A 1mkp_A
Probab=33.17 E-value=44 Score=21.58 Aligned_cols=26 Identities=12% Similarity=0.128 Sum_probs=18.9
Q ss_pred chhHHHHHHhh-cCCCHHHHHHHHHHH
Q 044570 19 VHKSIQCYMHE-AGVSEREAREHIHDL 44 (109)
Q Consensus 19 ~~ssI~cYMke-~g~seEeA~~~i~~~ 44 (109)
.++.+-||+-. .|+|.++|.+.+++.
T Consensus 99 S~~vv~ayLm~~~~~~~~~A~~~v~~~ 125 (155)
T 2hxp_A 99 SVTVTVAYLMQKLHLSLNDAYDLVKRK 125 (155)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 34556788765 499999999877653
No 40
>1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A {Homo sapiens}
Probab=33.07 E-value=34 Score=21.76 Aligned_cols=26 Identities=8% Similarity=0.198 Sum_probs=18.9
Q ss_pred chhHHHHHHhh-cCCCHHHHHHHHHHH
Q 044570 19 VHKSIQCYMHE-AGVSEREAREHIHDL 44 (109)
Q Consensus 19 ~~ssI~cYMke-~g~seEeA~~~i~~~ 44 (109)
.+..+-+|+-. .|+|.++|.++++..
T Consensus 97 Sg~~~~ayl~~~~~~~~~~a~~~v~~~ 123 (149)
T 1zzw_A 97 SATIVIAYLMKHTRMTMTDAYKFVKGK 123 (149)
T ss_dssp HHHHHHHHHHHHSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 34556678765 599999999877653
No 41
>1xju_A Lysozyme; secreted inactive conformation, hydrolase; 1.07A {Enterobacteria phage P1} SCOP: d.2.1.3
Probab=32.79 E-value=97 Score=20.76 Aligned_cols=44 Identities=11% Similarity=0.089 Sum_probs=33.7
Q ss_pred CCCHHHHHHHHHHHHHHHHHhhchhhcCCCCcCcH----HHHHHHHHHHh
Q 044570 31 GVSEREAREHIHDLIAQTWMKMNRDRFGNPHFVSD----VFVGIAMNLAR 76 (109)
Q Consensus 31 g~seEeA~~~i~~~ie~~wK~ln~e~l~~~~~~p~----~~~~~~~NlaR 76 (109)
.+|+++|..-+..-|....+.+++.+- ..+ +|+ +++.+++|+.-
T Consensus 43 ~iT~~ea~~ll~~dl~~~~~~v~~~~~-~v~-l~q~q~dALvSfayNvG~ 90 (163)
T 1xju_A 43 RKTDQQIAADWEKNILIAERCINQHFR-GKD-MPDNAFSAMTSAAFNMGC 90 (163)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHSC-GGG-SCHHHHHHHHHHHHHHCH
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHhcC-CCC-CCHHHHHHHHHHHHhcCc
Confidence 589999999999999999999887642 123 444 57888888763
No 42
>2vkc_A NEDD4-binding protein 2; human BCL3 binding protein, alternative splicing, homologous recombination, mismatch repair, small MUTS related; NMR {Homo sapiens}
Probab=32.18 E-value=40 Score=21.99 Aligned_cols=20 Identities=25% Similarity=0.376 Sum_probs=17.9
Q ss_pred cCCCHHHHHHHHHHHHHHHH
Q 044570 30 AGVSEREAREHIHDLIAQTW 49 (109)
Q Consensus 30 ~g~seEeA~~~i~~~ie~~w 49 (109)
||.+.+||+..+...|+++.
T Consensus 59 HGl~v~EA~~~L~~fL~~a~ 78 (135)
T 2vkc_A 59 HGLHVDEALEHLMRVLEKKT 78 (135)
T ss_dssp TTCCHHHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHHH
Confidence 58999999999999999874
No 43
>3emu_A Leucine rich repeat and phosphatase domain containing protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.30A {Entamoeba histolytica}
Probab=31.61 E-value=48 Score=21.68 Aligned_cols=26 Identities=12% Similarity=0.116 Sum_probs=19.4
Q ss_pred chhHHHHHHh-hcCCCHHHHHHHHHHH
Q 044570 19 VHKSIQCYMH-EAGVSEREAREHIHDL 44 (109)
Q Consensus 19 ~~ssI~cYMk-e~g~seEeA~~~i~~~ 44 (109)
.++.+-+|+- .+|.|.++|.+.++..
T Consensus 101 S~~vv~ayLm~~~~~s~~~A~~~v~~~ 127 (161)
T 3emu_A 101 APAIVIAFLMYYQRLSFINAFNKVQGL 127 (161)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 3566667765 5599999999888753
No 44
>2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase; 2.10A {Homo sapiens}
Probab=31.06 E-value=52 Score=20.77 Aligned_cols=24 Identities=13% Similarity=0.238 Sum_probs=17.8
Q ss_pred hhHHHHHHhh-cCCCHHHHHHHHHH
Q 044570 20 HKSIQCYMHE-AGVSEREAREHIHD 43 (109)
Q Consensus 20 ~ssI~cYMke-~g~seEeA~~~i~~ 43 (109)
++.+-+|+-. .|+|.++|.+.++.
T Consensus 96 ~~~v~ayLm~~~~~~~~~A~~~v~~ 120 (145)
T 2nt2_A 96 ASTVIAYAMKEYGWNLDRAYDYVKE 120 (145)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 3446677654 59999999988776
No 45
>3f81_A Dual specificity protein phosphatase 3; hydrolase, protein dual-specificity phosphatase, inhibitor; HET: STT; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1vhr_A* 1j4x_A*
Probab=31.02 E-value=37 Score=22.38 Aligned_cols=26 Identities=8% Similarity=0.151 Sum_probs=19.6
Q ss_pred CchhHHHHHHh-hcCCCHHHHHHHHHH
Q 044570 18 DVHKSIQCYMH-EAGVSEREAREHIHD 43 (109)
Q Consensus 18 ~~~ssI~cYMk-e~g~seEeA~~~i~~ 43 (109)
-.++.+-+|+- ..|.|.++|.++++.
T Consensus 128 RSg~~v~ayLm~~~~~~~~~A~~~v~~ 154 (183)
T 3f81_A 128 RSPTLVIAYLMMRQKMDVKSALSIVRQ 154 (183)
T ss_dssp HHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 34565677764 559999999998875
No 46
>1ngm_B Transcription factor IIIB BRF1 subunit; TFIIIB, TBP, TAF, protein-DNA complex, transcription/DNA complex; 2.95A {Saccharomyces cerevisiae} SCOP: j.104.1.1
Probab=31.02 E-value=39 Score=20.24 Aligned_cols=22 Identities=23% Similarity=0.516 Sum_probs=16.8
Q ss_pred CCHHHHHHHHHHHHHHHHHhhchhhcC
Q 044570 32 VSEREAREHIHDLIAQTWMKMNRDRFG 58 (109)
Q Consensus 32 ~seEeA~~~i~~~ie~~wK~ln~e~l~ 58 (109)
.|++|+. +=+.-|..+|++||.
T Consensus 41 LteeEv~-----~K~~iW~~~N~dyL~ 62 (72)
T 1ngm_B 41 LNEEASK-----LKERIWIGLNADFLL 62 (72)
T ss_dssp CCHHHHH-----HHHHHHHHHTTTHHH
T ss_pred CCHHHHH-----HHHHHHHHHhHHHHH
Confidence 5788875 335679999999985
No 47
>2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics, phosphatase, PSI-2, protein structure initiative; 1.60A {Homo sapiens}
Probab=31.02 E-value=38 Score=21.60 Aligned_cols=25 Identities=20% Similarity=0.305 Sum_probs=18.3
Q ss_pred hhHHHHHHhh-cCCCHHHHHHHHHHH
Q 044570 20 HKSIQCYMHE-AGVSEREAREHIHDL 44 (109)
Q Consensus 20 ~ssI~cYMke-~g~seEeA~~~i~~~ 44 (109)
+..+-+|+-. .|+|.++|.+.++..
T Consensus 105 ~~~~~ayl~~~~~~~~~~a~~~v~~~ 130 (154)
T 2r0b_A 105 AAFVIAYIMETFGMKYRDAFAYVQER 130 (154)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 4446677765 599999999877653
No 48
>3hde_A Lysozyme; antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase, late protein; 1.95A {Enterobacteria phage P21}
Probab=30.92 E-value=1.2e+02 Score=20.35 Aligned_cols=42 Identities=10% Similarity=0.153 Sum_probs=31.5
Q ss_pred CCCHHHHHHHHHHHHHHHHHhhchhhcCCCCcCcH----HHHHHHHHHH
Q 044570 31 GVSEREAREHIHDLIAQTWMKMNRDRFGNPHFVSD----VFVGIAMNLA 75 (109)
Q Consensus 31 g~seEeA~~~i~~~ie~~wK~ln~e~l~~~~~~p~----~~~~~~~Nla 75 (109)
.+|+++|..-+..-+...-+.+++.+ . .+ +|+ +++.+++|+.
T Consensus 65 ~iT~~ea~~lL~~Dl~~~e~~v~~~v-~-v~-L~q~q~dALvSfafNvG 110 (165)
T 3hde_A 65 TYTKAECKALLNKDLATVARQINPYI-K-VD-IPETMRGALYSFVYNVG 110 (165)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHGGGC-C-SC-CCHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHhc-C-CC-CCHHHHHHHHHHHHhcC
Confidence 68999999999999999999998754 2 33 554 4555666654
No 49
>1lgh_B LH II, B800/850, light harvesting complex II; bacteriochlorophyll, dexter energy transfer, foerster exciton transfer mechanism; HET: BCL LYC DET HTO; 2.40A {Phaeospirillum molischianum} SCOP: f.3.1.1
Probab=30.77 E-value=60 Score=17.68 Aligned_cols=17 Identities=41% Similarity=0.628 Sum_probs=11.7
Q ss_pred CCCHHHHHHHHHHHHHHH
Q 044570 31 GVSEREAREHIHDLIAQT 48 (109)
Q Consensus 31 g~seEeA~~~i~~~ie~~ 48 (109)
|.|+|||. ++.++.-+.
T Consensus 7 GLT~~EA~-EfH~~~~~~ 23 (45)
T 1lgh_B 7 GLTEEEAI-AVHDQFKTT 23 (45)
T ss_dssp SCCHHHHH-HHHHHHHHH
T ss_pred CCCHHHHH-HHHHHHHHH
Confidence 89999998 555554433
No 50
>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual specicity protein phosphatase 23, DUS23_human, malate, structural genomics, PSI; 1.93A {Homo sapiens}
Probab=30.67 E-value=39 Score=21.11 Aligned_cols=27 Identities=22% Similarity=0.537 Sum_probs=21.3
Q ss_pred CCchhHHHHHHhhc-CCCHHHHHHHHHH
Q 044570 17 GDVHKSIQCYMHEA-GVSEREAREHIHD 43 (109)
Q Consensus 17 g~~~ssI~cYMke~-g~seEeA~~~i~~ 43 (109)
|-.+..+-||+-.. |++.++|.+.++.
T Consensus 101 ~Rsg~~~~~~l~~~~~~~~~~a~~~~r~ 128 (151)
T 2img_A 101 GRTGTMLACYLVKERGLAAGDAIAEIRR 128 (151)
T ss_dssp SHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHhCcCHHHHHHHHHH
Confidence 34567778887766 9999999988875
No 51
>2hcm_A Dual specificity protein phosphatase; structural genomics, PSI, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Mus musculus}
Probab=29.90 E-value=54 Score=21.20 Aligned_cols=24 Identities=17% Similarity=0.199 Sum_probs=17.4
Q ss_pred hhHHHHHHhh-cCCCHHHHHHHHHH
Q 044570 20 HKSIQCYMHE-AGVSEREAREHIHD 43 (109)
Q Consensus 20 ~ssI~cYMke-~g~seEeA~~~i~~ 43 (109)
++.+-+|+-. .|+|.++|.+.++.
T Consensus 104 g~~~~ayLm~~~~~~~~~A~~~v~~ 128 (164)
T 2hcm_A 104 AAVCTAYLMRHRGHSLDRAFQMVKS 128 (164)
T ss_dssp HHHHHHHHHHHSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 3445677654 59999999987765
No 52
>3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus musculus} PDB: 3rgq_A*
Probab=29.77 E-value=41 Score=21.29 Aligned_cols=25 Identities=24% Similarity=0.263 Sum_probs=18.4
Q ss_pred chhHHHHHHhh-cCCCHHHHHHHHHH
Q 044570 19 VHKSIQCYMHE-AGVSEREAREHIHD 43 (109)
Q Consensus 19 ~~ssI~cYMke-~g~seEeA~~~i~~ 43 (109)
.+..+-+|+-. .|+|.++|.+.++.
T Consensus 103 sg~~~~a~l~~~~~~~~~~a~~~v~~ 128 (157)
T 3rgo_A 103 SATMVAAYLIQVHNWSPEEAIEAIAK 128 (157)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 34555677655 59999999988876
No 53
>1uzc_A Hypothetical protein FLJ21157; nuclear protein, structure, transcription, phosphopeptide recognition, RNA polymerase II carboxyl- terminal domain; NMR {Homo sapiens} SCOP: a.159.2.1 PDB: 2kzg_A 2lks_A 2l9v_A
Probab=29.68 E-value=40 Score=19.86 Aligned_cols=18 Identities=17% Similarity=0.353 Sum_probs=15.7
Q ss_pred CCCHHHHHHHHHHHHHHH
Q 044570 31 GVSEREAREHIHDLIAQT 48 (109)
Q Consensus 31 g~seEeA~~~i~~~ie~~ 48 (109)
-.|.|||.+.+++|+++.
T Consensus 11 ~~t~eea~~~F~~LL~e~ 28 (71)
T 1uzc_A 11 WNTKEEAKQAFKELLKEK 28 (71)
T ss_dssp CCSHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHc
Confidence 358999999999999985
No 54
>4e97_A Lysozyme; hydrolase, alkylation with 2-mercaptoethanol; 1.30A {Enterobacteria phage T4} PDB: 4ekp_A 4ekq_A* 4ekr_A 4eks_A
Probab=29.29 E-value=56 Score=22.26 Aligned_cols=45 Identities=7% Similarity=0.059 Sum_probs=32.8
Q ss_pred CCCHHHHHHHHHHHHHHHHHhhchhhcCC---CCcCcH----HHHHHHHHHHh
Q 044570 31 GVSEREAREHIHDLIAQTWMKMNRDRFGN---PHFVSD----VFVGIAMNLAR 76 (109)
Q Consensus 31 g~seEeA~~~i~~~ie~~wK~ln~e~l~~---~~~~p~----~~~~~~~NlaR 76 (109)
.+|+++|.+-+.+-|..+-+.+++.+-.. .. +|. +++.+++|+..
T Consensus 80 ~it~~~a~~ll~~Dl~~~~~~~~~~~~~~~~~~~-l~~~~~~ALvsm~FNlG~ 131 (187)
T 4e97_A 80 VITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDS-LDAVRRCAAINHVFQMGV 131 (187)
T ss_dssp BCCHHHHHHHHHHHHHHHHHHHHTCTTHHHHHHH-SCHHHHHHHHHHHHHHCH
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHhccccccc-CCHHHHHHheeeeeccCC
Confidence 38999999999999999998887754211 12 443 57788888763
No 55
>3tq7_B Microtubule-associated protein RP/EB family membe; CAP-Gly domain, protein-protein interaction, microtubule BIN cytoskeleton, protein binding; 2.30A {Homo sapiens} SCOP: a.245.1.1
Probab=29.03 E-value=23 Score=21.75 Aligned_cols=19 Identities=16% Similarity=0.303 Sum_probs=10.5
Q ss_pred HHhhHhhhcccCCCCcCCch
Q 044570 74 LARMSQCMYQFGEGHRHGVQ 93 (109)
Q Consensus 74 laR~~~~~Y~~~Dgyt~~~~ 93 (109)
+.|+..++|...|||.. |+
T Consensus 49 ~~~I~~ILYaTeegf~~-p~ 67 (82)
T 3tq7_B 49 ISGIIGILYATEEGFAP-PE 67 (82)
T ss_dssp HHHHHHHHTCCC--------
T ss_pred HHHHHHHHhccccCCCC-CC
Confidence 46888999999999998 64
No 56
>2anv_A Lysozyme; direct methods, lanthinide binding sites, hydrolase; 1.04A {Enterobacteria phage P22} PDB: 2anx_A
Probab=28.42 E-value=1.2e+02 Score=19.66 Aligned_cols=42 Identities=5% Similarity=0.095 Sum_probs=31.0
Q ss_pred CCCHHHHHHHHHHHHHHHHHhhchhhcCCCCcCcH----HHHHHHHHHH
Q 044570 31 GVSEREAREHIHDLIAQTWMKMNRDRFGNPHFVSD----VFVGIAMNLA 75 (109)
Q Consensus 31 g~seEeA~~~i~~~ie~~wK~ln~e~l~~~~~~p~----~~~~~~~Nla 75 (109)
.+|+++|..-+..-+...-+.+++.+ . -+ +|+ +++.+++|+.
T Consensus 50 ~iT~~ea~~ll~~dl~~~~~~v~~~~-~-v~-l~q~q~dALvsf~yNvG 95 (146)
T 2anv_A 50 TITAEKSSELLKEDLQWVEDAISSLV-R-VP-LNQNQYDAMCSLIFNIG 95 (146)
T ss_dssp BCCHHHHHHHHHHHTHHHHHHHHHHC-C-SC-CCHHHHHHHHHHHHHHC
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHhC-C-CC-CCHHHHHHHHhhhhccC
Confidence 58999999999999999998888753 2 23 555 4555556654
No 57
>2o6n_A RH4B designed peptide; right-handed, tetramer, de novo protein; HET: CGU; 1.10A {Synthetic} SCOP: k.17.1.1 PDB: 1tgg_A*
Probab=28.21 E-value=63 Score=16.21 Aligned_cols=22 Identities=18% Similarity=0.226 Sum_probs=14.5
Q ss_pred HHHHHHHHHHHHHHHHhhchhh
Q 044570 35 REAREHIHDLIAQTWMKMNRDR 56 (109)
Q Consensus 35 EeA~~~i~~~ie~~wK~ln~e~ 56 (109)
|.|.++|--+|..+-.++.++.
T Consensus 5 eqakkeiaylikkakeeileei 26 (35)
T 2o6n_A 5 EQAKKEIAYLIKKAKEEILEEI 26 (35)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 6677777777777666665553
No 58
>2oud_A Dual specificity protein phosphatase 10; A central five-stranded B-sheet, hydrolase; 2.80A {Homo sapiens}
Probab=28.07 E-value=52 Score=21.75 Aligned_cols=26 Identities=8% Similarity=0.198 Sum_probs=19.2
Q ss_pred chhHHHHHHhh-cCCCHHHHHHHHHHH
Q 044570 19 VHKSIQCYMHE-AGVSEREAREHIHDL 44 (109)
Q Consensus 19 ~~ssI~cYMke-~g~seEeA~~~i~~~ 44 (109)
.+..+-||+-. .|+|.++|.+.++..
T Consensus 101 Sg~~v~ayLm~~~~~~~~~A~~~v~~~ 127 (177)
T 2oud_A 101 SATIVIAYLMKHTRMTMTDAYKFVKGK 127 (177)
T ss_dssp HHHHHHHHHHHTSCCCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 34556778765 599999999887653
No 59
>1swy_A Lysozyme; RB+ binding sites, AB initio direct methods, hydrolase; 1.06A {Enterobacteria phage T4} SCOP: d.2.1.3 PDB: 1swz_A 1sx2_A 1sx7_A 3fad_A 3f9l_A 2nzn_A 3c8s_A 3cdr_A 2nzb_A 3c8q_A 3c7w_A 3cdq_A 3f8v_A 1l34_A 3c7y_A 2lzm_A 1t6h_A* 1lyd_A 3lzm_A 4lzm_A ...
Probab=27.49 E-value=95 Score=20.57 Aligned_cols=44 Identities=9% Similarity=0.147 Sum_probs=30.9
Q ss_pred CCCHHHHHHHHHHHHHHHHHhhchhhcC---CCCcCcH----HHHHHHHHHH
Q 044570 31 GVSEREAREHIHDLIAQTWMKMNRDRFG---NPHFVSD----VFVGIAMNLA 75 (109)
Q Consensus 31 g~seEeA~~~i~~~ie~~wK~ln~e~l~---~~~~~p~----~~~~~~~Nla 75 (109)
.+|+++|.+-+..-+...-+.+++.+-- -.+ +|+ +++.+++|+.
T Consensus 57 ~iT~~ea~~ll~~dl~~~~~~v~~~~~~~~~~~~-l~q~q~dALvs~~fN~G 107 (164)
T 1swy_A 57 VITKDEAEKLFNQDVAAAVRGILRNAKLKPVYDS-LDAVRECALINMVFQMG 107 (164)
T ss_dssp BCCHHHHHHHHHHHHHHHHHHHHHCTTHHHHHHH-SCHHHHHHHHHHHHHHC
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHHhccccccccC-CCHHHHHHHHHHHHcCC
Confidence 3899999999999999999888875410 012 444 4666666654
No 60
>1xjt_A Lysozyme; open conformation, hydrolase; HET: CIT; 1.75A {Enterobacteria phage P1} SCOP: d.2.1.3
Probab=27.32 E-value=1.3e+02 Score=20.77 Aligned_cols=43 Identities=12% Similarity=0.108 Sum_probs=33.3
Q ss_pred CCCHHHHHHHHHHHHHHHHHhhchhhcCCCCcCcH----HHHHHHHHHH
Q 044570 31 GVSEREAREHIHDLIAQTWMKMNRDRFGNPHFVSD----VFVGIAMNLA 75 (109)
Q Consensus 31 g~seEeA~~~i~~~ie~~wK~ln~e~l~~~~~~p~----~~~~~~~Nla 75 (109)
.+|+++|..-+..-+....+.+++.+- ..+ +|+ +++.+++|+.
T Consensus 71 ~iT~~ea~~lL~~Dl~~~~~~v~~~v~-~v~-l~q~q~dALvSfayNvG 117 (191)
T 1xjt_A 71 RKTDQQIAADWEKNILIAERCINQHFR-GKD-MPDNAFSAMTSAAFNMG 117 (191)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHSC-GGG-SCHHHHHHHHHHHHHHC
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHhcC-CCC-CCHHHHHHHHHHHHhcC
Confidence 589999999999999999999988542 123 454 5778888876
No 61
>1lj2_A NSP3-C, nonstructural RNA-binding protein 34, NS34, NCVP4; NSP3, homodimer, translation, mRNA, closed loop, coiled coil; 2.38A {Simian rotavirus A} SCOP: h.1.13.2
Probab=27.05 E-value=44 Score=21.57 Aligned_cols=18 Identities=22% Similarity=0.506 Sum_probs=13.9
Q ss_pred CCchhHHHHHHhhcCCCH
Q 044570 17 GDVHKSIQCYMHEAGVSE 34 (109)
Q Consensus 17 g~~~ssI~cYMke~g~se 34 (109)
|.+.|||+||++.-..+.
T Consensus 34 ~slisSiEw~l~Smel~d 51 (110)
T 1lj2_A 34 GSLTSSIEWYLRSMELDP 51 (110)
T ss_dssp HHHHHHHHHHHHTSCCCH
T ss_pred HHHHHHHHHHHhhccCCh
Confidence 567899999999765543
No 62
>1wrm_A Dual specificity phosphatase 22; DSP, JNK, hydrolase; HET: MES; 1.50A {Homo sapiens}
Probab=26.74 E-value=76 Score=20.56 Aligned_cols=25 Identities=8% Similarity=0.081 Sum_probs=17.8
Q ss_pred hhHHHHHHhh-cCCCHHHHHHHHHHH
Q 044570 20 HKSIQCYMHE-AGVSEREAREHIHDL 44 (109)
Q Consensus 20 ~ssI~cYMke-~g~seEeA~~~i~~~ 44 (109)
+..+-+|+-. .|+|.++|.+.++..
T Consensus 98 g~~~~ayLm~~~~~~~~~A~~~v~~~ 123 (165)
T 1wrm_A 98 VTLVIAYIMTVTDFGWEDALHTVRAG 123 (165)
T ss_dssp HHHHHHHHHHTSSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 4444667655 499999999887653
No 63
>2j16_A SDP-1, tyrosine-protein phosphatase YIL113W; hydrolase, hypothetical protein; 2.7A {Saccharomyces cerevisiae} PDB: 2j17_A* 2j16_B
Probab=26.73 E-value=63 Score=21.93 Aligned_cols=26 Identities=15% Similarity=0.240 Sum_probs=20.4
Q ss_pred CchhHHHHHHhh-cCCCHHHHHHHHHH
Q 044570 18 DVHKSIQCYMHE-AGVSEREAREHIHD 43 (109)
Q Consensus 18 ~~~ssI~cYMke-~g~seEeA~~~i~~ 43 (109)
-.++.+-+|+-. .|.|.++|.+.++.
T Consensus 130 RS~tvv~ayLm~~~~~s~~~A~~~v~~ 156 (182)
T 2j16_A 130 RSATLIIAYIMKYHNLSLRHSYDLLKS 156 (182)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 346777788765 49999999998877
No 64
>4erc_A Dual specificity protein phosphatase 23; alpha beta, phosphatase(hydrolase), hydrolase; 1.15A {Homo sapiens} PDB: 2img_A
Probab=26.14 E-value=71 Score=19.93 Aligned_cols=25 Identities=20% Similarity=0.488 Sum_probs=19.1
Q ss_pred chhHHHHHHhh-cCCCHHHHHHHHHH
Q 044570 19 VHKSIQCYMHE-AGVSEREAREHIHD 43 (109)
Q Consensus 19 ~~ssI~cYMke-~g~seEeA~~~i~~ 43 (109)
.+..+-||+-. .|++.++|.+.++.
T Consensus 102 sg~~~a~~l~~~~~~~~~~a~~~vr~ 127 (150)
T 4erc_A 102 TGTMLACYLVKERGLAAGDAIAEIRR 127 (150)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 34567787555 59999999988875
No 65
>1ghh_A DINI, DNA-damage-inducible protein I; bicelle, dipolar coupling, liquid crystal, PF1, RECA, protein binding; NMR {Escherichia coli} SCOP: d.57.1.1
Probab=25.82 E-value=67 Score=19.51 Aligned_cols=20 Identities=20% Similarity=0.715 Sum_probs=16.6
Q ss_pred CCCHHHHHHHHHHHHHHHHHh
Q 044570 31 GVSEREAREHIHDLIAQTWMK 51 (109)
Q Consensus 31 g~seEeA~~~i~~~ie~~wK~ 51 (109)
|.+.+ .++.|.+++++.|.+
T Consensus 54 g~~k~-dKe~i~eiLqE~we~ 73 (81)
T 1ghh_A 54 GATKE-DKQRISEILQETWES 73 (81)
T ss_dssp SCCHH-HHHHHHHHHHHHHHT
T ss_pred CCChh-HHHHHHHHHHHHHhC
Confidence 55565 799999999999975
No 66
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=25.59 E-value=51 Score=27.25 Aligned_cols=30 Identities=20% Similarity=0.315 Sum_probs=24.1
Q ss_pred hHHHHHHhhc---CCCHHHHHHHHHHHHHHHHHh
Q 044570 21 KSIQCYMHEA---GVSEREAREHIHDLIAQTWMK 51 (109)
Q Consensus 21 ssI~cYMke~---g~seEeA~~~i~~~ie~~wK~ 51 (109)
.+| .|+++. +.|+|||.+++.++|+++-..
T Consensus 572 ~~i-~~l~~rf~l~lse~ea~~~~~~lI~~S~~s 604 (614)
T 3ls8_A 572 KTV-KKVQDKFRLDLSDEEAVHYMQSLIDESVHA 604 (614)
T ss_dssp GHH-HHHHHHTTTTSCHHHHHHHHHHHHHHHHHH
T ss_pred HHH-HHHHHHcCCCCCHHHHHHHHHHHHHHHHhh
Confidence 445 377775 899999999999999987644
No 67
>1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.1 PDB: 1fq1_A*
Probab=25.43 E-value=59 Score=22.06 Aligned_cols=27 Identities=19% Similarity=0.304 Sum_probs=21.2
Q ss_pred CchhHHHHHHhh-c-CCCHHHHHHHHHHH
Q 044570 18 DVHKSIQCYMHE-A-GVSEREAREHIHDL 44 (109)
Q Consensus 18 ~~~ssI~cYMke-~-g~seEeA~~~i~~~ 44 (109)
-.+..+-||+.. + |++.++|++.++..
T Consensus 146 RTg~~~a~~L~~~~~g~~~~~a~~~vr~~ 174 (212)
T 1fpz_A 146 RSCLVAACLLLYLSDTISPEQAIDSLRDL 174 (212)
T ss_dssp HHHHHHHHHHHHHCSSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCCHHHHHHHHHHh
Confidence 345677799987 3 99999999888754
No 68
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana}
Probab=24.45 E-value=79 Score=23.06 Aligned_cols=25 Identities=20% Similarity=0.155 Sum_probs=20.0
Q ss_pred chhHHHHHHhhc-CCCHHHHHHHHHH
Q 044570 19 VHKSIQCYMHEA-GVSEREAREHIHD 43 (109)
Q Consensus 19 ~~ssI~cYMke~-g~seEeA~~~i~~ 43 (109)
.++.+-+|+-.+ |.|.++|...++.
T Consensus 120 S~tvv~ayLm~~~g~s~~~A~~~v~~ 145 (294)
T 3nme_A 120 APAVALTYMFWVQGYKLMEAHKLLMS 145 (294)
T ss_dssp HHHHHHHHHHHTSCCCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 467777887665 9999999988865
No 69
>1wj7_A Hypothetical protein (RSGI RUH-015); UBA domain, ubiquitin associated domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: a.5.2.1
Probab=24.43 E-value=79 Score=20.19 Aligned_cols=21 Identities=14% Similarity=0.283 Sum_probs=13.0
Q ss_pred HHHHHHhhcCCCHHHHHHHHH
Q 044570 22 SIQCYMHEAGVSEREAREHIH 42 (109)
Q Consensus 22 sI~cYMke~g~seEeA~~~i~ 42 (109)
-|.--|...|+|+++|+..+.
T Consensus 42 kVk~L~EmtG~seeeAr~AL~ 62 (104)
T 1wj7_A 42 KVKQLIDITGKNQDECVIALH 62 (104)
T ss_dssp HHHHHHHHTCCCHHHHHHHHH
T ss_pred HHHHHHHhhCCCHHHHHHHHH
Confidence 355455555788777776554
No 70
>2g6z_A Dual specificity protein phosphatase 5; alpha/beta, hydrolase; 2.70A {Homo sapiens}
Probab=24.42 E-value=72 Score=22.19 Aligned_cols=25 Identities=16% Similarity=0.150 Sum_probs=19.0
Q ss_pred hhHHHHHHhh-cCCCHHHHHHHHHHH
Q 044570 20 HKSIQCYMHE-AGVSEREAREHIHDL 44 (109)
Q Consensus 20 ~ssI~cYMke-~g~seEeA~~~i~~~ 44 (109)
++.+-+|+-. .|++.++|++.++..
T Consensus 98 gtvv~AYLm~~~g~s~~eAl~~vr~~ 123 (211)
T 2g6z_A 98 PTICMAYLMKTKQFRLKEAFDYIKQR 123 (211)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 4556677665 499999999988764
No 71
>2e0t_A Dual specificity phosphatase 26; conserved hypothetical protein, structural genomics, NPPSFA, project on protein structural and functional analyses; 1.67A {Homo sapiens}
Probab=24.17 E-value=75 Score=20.03 Aligned_cols=24 Identities=17% Similarity=0.214 Sum_probs=17.7
Q ss_pred hhHHHHHH-hhcCCCHHHHHHHHHH
Q 044570 20 HKSIQCYM-HEAGVSEREAREHIHD 43 (109)
Q Consensus 20 ~ssI~cYM-ke~g~seEeA~~~i~~ 43 (109)
++.+-+|+ +..|+|.++|.+.++.
T Consensus 100 g~~~~ayl~~~~~~~~~~a~~~v~~ 124 (151)
T 2e0t_A 100 ATLVLAYLMLYHHLTLVEAIKKVKD 124 (151)
T ss_dssp HHHHHHHHHHHSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 34556765 4569999999988875
No 72
>2esb_A Dual specificity protein phosphatase 18; alpha/beta structure, hydrolase; HET: EPE; 2.00A {Homo sapiens}
Probab=23.64 E-value=79 Score=21.14 Aligned_cols=24 Identities=13% Similarity=0.070 Sum_probs=17.6
Q ss_pred hhHHHHHHh-hcCCCHHHHHHHHHH
Q 044570 20 HKSIQCYMH-EAGVSEREAREHIHD 43 (109)
Q Consensus 20 ~ssI~cYMk-e~g~seEeA~~~i~~ 43 (109)
++.+-+|+- ..|.|.++|.+.++.
T Consensus 112 ~~vv~ayLm~~~~~s~~~A~~~v~~ 136 (188)
T 2esb_A 112 AALCLAYLMKYHAMSLLDAHTWTKS 136 (188)
T ss_dssp HHHHHHHHHHHSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 444567764 469999999988765
No 73
>2z3q_A Interleukin-15, IL-15; protein-protein complex, cytokine/cytokine receptor complex; 1.85A {Homo sapiens} SCOP: a.26.1.2 PDB: 2z3r_A 2xqb_A 2psm_A
Probab=23.26 E-value=30 Score=22.74 Aligned_cols=35 Identities=20% Similarity=0.414 Sum_probs=25.9
Q ss_pred hHHHHHHhhc-CCCHHHHHHHHHHHHHHHHHhhchh
Q 044570 21 KSIQCYMHEA-GVSEREAREHIHDLIAQTWMKMNRD 55 (109)
Q Consensus 21 ssI~cYMke~-g~seEeA~~~i~~~ie~~wK~ln~e 55 (109)
.+.+||+.|= -+..|.....|..-+++-++.-|..
T Consensus 43 ~~L~CfllEL~vV~~E~~~~ei~~tv~nii~l~N~~ 78 (119)
T 2z3q_A 43 TAMKCFLLELQVISLESGDASIHDTVENLIILANNS 78 (119)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHcccccHHHHHHHHHhhhcc
Confidence 6899999997 4556666667777788888766654
No 74
>1p16_A GTP--RNA, mRNA capping enzyme alpha subunit; guanylyltransferase, transcription, capping, CTD, mRNA; HET: SEP G GTP; 2.70A {Candida albicans} SCOP: b.40.4.6 d.142.2.3
Probab=23.09 E-value=1.5e+02 Score=22.56 Aligned_cols=52 Identities=21% Similarity=0.395 Sum_probs=37.5
Q ss_pred cceeeeeehhHHhcCCchhHHHHHHhh--cCCCHHHHHHHHHHHHHHHHHhhchh
Q 044570 3 NAWISVAAPDELKRGDVHKSIQCYMHE--AGVSEREAREHIHDLIAQTWMKMNRD 55 (109)
Q Consensus 3 ~~~~i~s~~~E~~rg~~~ssI~cYMke--~g~seEeA~~~i~~~ie~~wK~ln~e 55 (109)
+.|-+.=...++...+-.++++-=|.- .++|+|+=+..+.. |.++||.-++.
T Consensus 334 g~wr~~R~R~DK~~pN~~~t~~~vl~si~~~vt~eeL~~~~~~-~~~~w~~~~~~ 387 (395)
T 1p16_A 334 GYWEMLRFRNDKSNGNHISVVEKILVSIKDGVKEKEVIEWCPK-ISRAWKKREND 387 (395)
T ss_dssp TEEEEEEECTTCSSCCBHHHHHHHHHHHHHSCCHHHHHHHHHH-HHHHHHHHHHH
T ss_pred CccEEEEEeCCCCCcChHHHHHHHHHHHHccCCHHHHHHHHHH-HHHHHHhhhhh
Confidence 367777666666656666776655554 49999998888777 68999987664
No 75
>2f46_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.41A {Neisseria meningitidis Z2491}
Probab=22.74 E-value=95 Score=20.00 Aligned_cols=24 Identities=8% Similarity=-0.072 Sum_probs=18.5
Q ss_pred hHHHHHHhhcCCCHHHHHHHHHHH
Q 044570 21 KSIQCYMHEAGVSEREAREHIHDL 44 (109)
Q Consensus 21 ssI~cYMke~g~seEeA~~~i~~~ 44 (109)
..+-||....|++.++|++.++..
T Consensus 117 ~l~al~l~~~g~~~~~a~~~~~~~ 140 (156)
T 2f46_A 117 LLWGFRRAAEGMPVDEIIRRAQAA 140 (156)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHc
Confidence 345567677899999999988753
No 76
>2jq3_A Apolipoprotein C-III; APOCIII, structure, dynamics, receptor, lipid binding protein; NMR {Homo sapiens}
Probab=22.67 E-value=24 Score=21.43 Aligned_cols=29 Identities=17% Similarity=0.336 Sum_probs=21.1
Q ss_pred hcCCchhHHHHHHhhcCCCHHHHHHHHHH
Q 044570 15 KRGDVHKSIQCYMHEAGVSEREAREHIHD 43 (109)
Q Consensus 15 ~rg~~~ssI~cYMke~g~seEeA~~~i~~ 43 (109)
+....-..++-||++.--+..+|...+++
T Consensus 4 e~~sLL~~mQ~YmqqAtktaqdaLtsvQE 32 (79)
T 2jq3_A 4 EDASLLSFMQGYMKHATKTAKDALSSVQE 32 (79)
T ss_dssp TTSCTHHHHHHHHHHHGGGHHHHHHGGGG
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456788999999887677777766653
No 77
>2o4w_A Lysozyme; protein folding, protein stability, protein engineering, hydrolase; 1.90A {Enterobacteria phage T4}
Probab=22.57 E-value=1.3e+02 Score=20.20 Aligned_cols=44 Identities=7% Similarity=0.126 Sum_probs=31.4
Q ss_pred CCCHHHHHHHHHHHHHHHHHhhchhhcC---CCCcCcH----HHHHHHHHHH
Q 044570 31 GVSEREAREHIHDLIAQTWMKMNRDRFG---NPHFVSD----VFVGIAMNLA 75 (109)
Q Consensus 31 g~seEeA~~~i~~~ie~~wK~ln~e~l~---~~~~~p~----~~~~~~~Nla 75 (109)
.+|+++|..-++.-+...-+.+++.+-- -.+ +|+ +++.+++|+.
T Consensus 46 ~iT~~ea~~ll~~Dl~~~~~~v~~~~~~~~~~v~-l~q~q~dALvSfafNvG 96 (171)
T 2o4w_A 46 VITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDS-LDAVRRAALINMVFQMG 96 (171)
T ss_dssp BCCHHHHHHHHHHHHHHHHHHHHHCTTTHHHHHH-SCHHHHHHHHHHHHHHC
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHHhccccccccC-CCHHHHHHHHHHHHhcC
Confidence 4899999999999999999988875420 012 443 5666677764
No 78
>2dsy_A Hypothetical protein TTHA0281; structural genomics, thermus thermophilus HB8, NPPSFA; HET: NHE; 1.90A {Thermus thermophilus} SCOP: d.304.1.2
Probab=22.40 E-value=72 Score=19.11 Aligned_cols=23 Identities=13% Similarity=0.205 Sum_probs=18.1
Q ss_pred CCCHHHHHHHHHHHHHHHHHhhc
Q 044570 31 GVSEREAREHIHDLIAQTWMKMN 53 (109)
Q Consensus 31 g~seEeA~~~i~~~ie~~wK~ln 53 (109)
|-|.|||++.+++.++..-..+.
T Consensus 43 G~T~eEA~~~a~eAl~~~le~~~ 65 (87)
T 2dsy_A 43 GKSLKECEANLQAALEDWLLFLL 65 (87)
T ss_dssp ESSHHHHHHHHHHHHHHHHHHHH
T ss_pred eCCHHHHHHHHHHHHHHHHHHHH
Confidence 67899999999998887655443
No 79
>1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase; HET: BOG; 2.40A {Homo sapiens}
Probab=22.20 E-value=85 Score=20.11 Aligned_cols=24 Identities=21% Similarity=0.353 Sum_probs=17.7
Q ss_pred hhHHHHHHh-hcCCCHHHHHHHHHH
Q 044570 20 HKSIQCYMH-EAGVSEREAREHIHD 43 (109)
Q Consensus 20 ~ssI~cYMk-e~g~seEeA~~~i~~ 43 (109)
++.+-+|+- ..|++.++|.+.++.
T Consensus 99 g~~~~aylm~~~~~~~~~a~~~v~~ 123 (160)
T 1yz4_A 99 TTIVTAYVMTVTGLGWRDVLEAIKA 123 (160)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 344567874 459999999988764
No 80
>2rmh_A Urocortin-3; CRF ligand, sauvagine, astressin2B, urotensins, CRF receptors, amidation, hormone, secreted; NMR {Synthetic}
Probab=22.20 E-value=73 Score=16.73 Aligned_cols=16 Identities=19% Similarity=0.395 Sum_probs=14.5
Q ss_pred CcHHHHHHHHHHHhhH
Q 044570 63 VSDVFVGIAMNLARMS 78 (109)
Q Consensus 63 ~p~~~~~~~~NlaR~~ 78 (109)
+|..+++..+++||.=
T Consensus 7 vp~~ll~~l~e~Ara~ 22 (38)
T 2rmh_A 7 VPTNIMNLLFNIAKAK 22 (38)
T ss_dssp CCHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHH
Confidence 9999999999999963
No 81
>2cs1_A PMS1 protein homolog 1; DNA mismatch repair protein PMS1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.06 E-value=97 Score=18.36 Aligned_cols=18 Identities=17% Similarity=0.357 Sum_probs=14.5
Q ss_pred HHHHHHHHHHHHHhhchh
Q 044570 38 REHIHDLIAQTWMKMNRD 55 (109)
Q Consensus 38 ~~~i~~~ie~~wK~ln~e 55 (109)
..+|..+|.+.|+.|..+
T Consensus 35 ~~eisk~lg~~Wk~ls~e 52 (92)
T 2cs1_A 35 LEDATLQIEELWKTLSEE 52 (92)
T ss_dssp HHHHHHHHHHHHHSSCHH
T ss_pred HHHHHHHHHHHHhcCCHH
Confidence 457889999999987654
No 82
>2wgp_A Dual specificity protein phosphatase 14; MKP6, DUSP14, hydrolase, dual specifici phosphatase; 1.88A {Homo sapiens}
Probab=21.83 E-value=90 Score=20.92 Aligned_cols=25 Identities=16% Similarity=0.119 Sum_probs=18.0
Q ss_pred hhHHHHHHhh-cCCCHHHHHHHHHHH
Q 044570 20 HKSIQCYMHE-AGVSEREAREHIHDL 44 (109)
Q Consensus 20 ~ssI~cYMke-~g~seEeA~~~i~~~ 44 (109)
++.+-+|+-. .|+|.++|.+.++..
T Consensus 118 gtvv~ayLm~~~~~s~~~A~~~v~~~ 143 (190)
T 2wgp_A 118 ATLCIAYLMKFHNVCLLEAYNWVKAR 143 (190)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 3456677655 499999999887653
No 83
>3mmj_A MYO-inositol hexaphosphate phosphohydrolase; phytase, protein tyrosine phosphatase, inositol phosphate, I phosphatase; HET: IHP; 1.60A {Selenomonas ruminantium} SCOP: c.45.1.4 PDB: 1u24_A 1u25_A* 1u26_A* 3o3l_A* 3moz_A* 2pt0_A 2psz_A 3d1h_A 3d1o_A 3d1q_A 2b4u_A 2b4p_A 2b4o_A
Probab=21.51 E-value=45 Score=25.27 Aligned_cols=39 Identities=15% Similarity=0.296 Sum_probs=26.9
Q ss_pred ceeeeeehhHHhcCCchhHHHHH--HhhcCCCHHHHHHHHHHH
Q 044570 4 AWISVAAPDELKRGDVHKSIQCY--MHEAGVSEREAREHIHDL 44 (109)
Q Consensus 4 ~~~i~s~~~E~~rg~~~ssI~cY--Mke~g~seEeA~~~i~~~ 44 (109)
.|++...+. .+|-....+-|| |++.+++.+|+++.++.+
T Consensus 214 ~~i~vHC~a--G~GRTgt~ma~y~ll~~~~vs~eeii~r~~~l 254 (314)
T 3mmj_A 214 AWLHFHSEA--GVGRTTAFMVMTDMLKNPSVSLKDILYRQHEI 254 (314)
T ss_dssp CEEEEECSS--SSHHHHHHHHHHHHHHCTTSCHHHHHHHHHHT
T ss_pred CCEEEECCC--CCchHHHHHHHHHHHHCCCCCHHHHHHHHHHh
Confidence 466666654 344556677787 566699999999877644
No 84
>2ckx_A NGTRF1, telomere binding protein TBP1; nuclear protein; 1.9A {Nicotiana tabacum} SCOP: a.4.1.3 PDB: 2qhb_A
Probab=20.99 E-value=1.5e+02 Score=17.81 Aligned_cols=53 Identities=15% Similarity=0.103 Sum_probs=33.8
Q ss_pred HHHhhchhhcC--CCCcCcHHHHHHHHHHHhhHhhhcccCCCCcCCchhHHHHHHHhc
Q 044570 48 TWMKMNRDRFG--NPHFVSDVFVGIAMNLARMSQCMYQFGEGHRHGVQEITKARVLSL 103 (109)
Q Consensus 48 ~wK~ln~e~l~--~~~~~p~~~~~~~~NlaR~~~~~Y~~~Dgyt~~~~~~~k~~I~sl 103 (109)
.|++|-+..+. ++. -+..|++..-|+.|....-+.-..|-.. | .++.+.|.++
T Consensus 22 ~W~~I~~~~~~~~~~R-T~~~lKdrWrnllk~~~~~p~~~~~~~~-p-~~~~~rv~~~ 76 (83)
T 2ckx_A 22 RWRDVKMRAFDNADHR-TYVDLKDKWKTLVHTASIAPQQRRGEPV-P-QDLLDRVLAA 76 (83)
T ss_dssp CHHHHHHHHCTTCTTS-CHHHHHHHHHHHHHHHHSCGGGCCSSCC-C-HHHHHHHHHH
T ss_pred CcHHHHHhhccccCCC-CHHHHHHHHHHHHHhccCCcccccCCCC-C-HHHHHHHHHH
Confidence 69998876321 233 5778999999999887766643434344 3 3566666543
No 85
>4b6i_A SMA2266; signaling protein; 1.95A {Serratia marcescens}
Probab=20.99 E-value=64 Score=20.55 Aligned_cols=37 Identities=22% Similarity=0.249 Sum_probs=29.3
Q ss_pred ehhHHhcCCchhHHHHHHhhcCCCHHHHHHHHHHHHHH
Q 044570 10 APDELKRGDVHKSIQCYMHEAGVSEREAREHIHDLIAQ 47 (109)
Q Consensus 10 ~~~E~~rg~~~ssI~cYMke~g~seEeA~~~i~~~ie~ 47 (109)
|+.+.-..|..+|...|+.-.....| |-++++++|+.
T Consensus 29 y~~~~~~~DA~~Sa~A~lE~~~y~~E-a~~~~~~Li~k 65 (102)
T 4b6i_A 29 TDSERTKQDAFRSASAYLELSKLPMD-AFEQGEKLAEQ 65 (102)
T ss_dssp CSCHHHHHHHHHHHHHHHHHCCSCHH-HHHHHHHHHHH
T ss_pred cCChHHHHHHHHHHHHHHHHhcCchh-hhHHHHHHHHH
Confidence 55555556778999999988788887 89999999875
No 86
>3f27_D Transcription factor SOX-17; protein-DNA complex, HMG domain, endodermal, activator, DNA- nucleus, transcription regulation, transcrip complex; HET: DNA; 2.75A {Mus musculus} SCOP: a.21.1.1 PDB: 2yul_A
Probab=20.91 E-value=1.1e+02 Score=17.57 Aligned_cols=35 Identities=6% Similarity=0.107 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHhhchhhcCCCCcCcHHHHHHHHHHHhhHhhhcc
Q 044570 38 REHIHDLIAQTWMKMNRDRFGNPHFVSDVFVGIAMNLARMSQCMYQ 83 (109)
Q Consensus 38 ~~~i~~~ie~~wK~ln~e~l~~~~~~p~~~~~~~~NlaR~~~~~Y~ 83 (109)
..+|..+|...|+.|.. .-+......|...---|.
T Consensus 34 ~~eisk~lg~~Wk~ls~-----------~eK~~y~~~A~~~k~~y~ 68 (83)
T 3f27_D 34 NAELSKMLGKSWKALTL-----------AEKRPFVEEAERLRVQHM 68 (83)
T ss_dssp HHHHHHHHHHHHHHSCH-----------HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCH-----------HHHHHHHHHHHHHHHHHH
Confidence 45788999999988654 344555555555545553
No 87
>1d0q_A DNA primase; zinc-binding motif, protein, transferase; HET: DNA; 1.71A {Geobacillus stearothermophilus} SCOP: g.41.3.2
Probab=20.57 E-value=1e+02 Score=18.83 Aligned_cols=26 Identities=15% Similarity=0.135 Sum_probs=21.0
Q ss_pred chhHHHHHHhhcCCCHHHHHHHHHHH
Q 044570 19 VHKSIQCYMHEAGVSEREAREHIHDL 44 (109)
Q Consensus 19 ~~ssI~cYMke~g~seEeA~~~i~~~ 44 (109)
-.++|+-+|+-.|+|--||.+.+.+.
T Consensus 67 gGd~i~fv~~~~~~sf~eA~~~La~~ 92 (103)
T 1d0q_A 67 GGNAFTFLMDIEGIPFVEAAKRLAAK 92 (103)
T ss_dssp EECHHHHHHHHHTCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHhCCCHHHHHHHHHHH
Confidence 34678888888899999999888764
No 88
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=20.51 E-value=71 Score=27.81 Aligned_cols=24 Identities=33% Similarity=0.508 Sum_probs=21.1
Q ss_pred HHhhc---CCCHHHHHHHHHHHHHHHH
Q 044570 26 YMHEA---GVSEREAREHIHDLIAQTW 49 (109)
Q Consensus 26 YMke~---g~seEeA~~~i~~~ie~~w 49 (109)
|+++. +.|+++|.+++.++|+++-
T Consensus 909 ~lr~rf~l~~se~eA~~~~~~lI~~s~ 935 (961)
T 1e7u_A 909 YIRDALTVGKSEEDAKKYFLDQIEVCR 935 (961)
T ss_dssp HHHHHTTTTSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCHHHHHHHHHHHHHHHH
Confidence 77774 8999999999999999875
Done!