AmiGO: BLAST Results

Query Summary

Your job contains 1 sequence.
Parameters: Threshold: 0.001; Maximum number of alignments shown: 100; BLAST filter: on
Query Sequence

>044571
MEGLYGISCVGKTTLANFVGNQLRQEKIFDEVGIATVSQDPDIIKVQGELAKSLGWALNE
KDEKERADRLRLMFSERYS
High Scoring Gene Products


Symbol, full name	Information	P value
BLAST match view associations BLAST with AT3G15700 AT3G15700 AT3G15700	protein from Arabidopsis thaliana	3.0e-05
BLAST match view associations BLAST with AT1G63360 AT1G63360 AT1G63360	protein from Arabidopsis thaliana	3.6e-05
BLAST match view associations BLAST with AT1G62630 AT1G62630 AT1G62630	protein from Arabidopsis thaliana	0.00012
BLAST match view associations BLAST with AT4G10780 AT4G10780 AT4G10780	protein from Arabidopsis thaliana	0.00026
BLAST match view associations BLAST with SUMM2 SUMM2 SUMM2 AT1G12280	protein from Arabidopsis thaliana	0.00042
BLAST match view associations BLAST with AT1G12290 AT1G12290 AT1G12290	protein from Arabidopsis thaliana	0.00088
Back to top
Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  044571
        (79 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2093192 - symbol:AT3G15700 species:3702 "Arabi...   106  3.0e-05   1
TAIR|locus:2031356 - symbol:AT1G63360 species:3702 "Arabi...   110  3.6e-05   1
TAIR|locus:2203881 - symbol:AT1G62630 species:3702 "Arabi...   105  0.00012   1
TAIR|locus:2132741 - symbol:AT4G10780 species:3702 "Arabi...   102  0.00026   1
TAIR|locus:2034770 - symbol:SUMM2 "AT1G12280" species:370...   100  0.00042   1
TAIR|locus:2034765 - symbol:AT1G12290 species:3702 "Arabi...    97  0.00088   1


>TAIR|locus:2093192 [details] [associations]
            symbol:AT3G15700 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0006952 "defense response"
            evidence=IEA;ISS] [GO:0043531 "ADP binding" evidence=IEA]
            InterPro:IPR000767 InterPro:IPR002182 Pfam:PF00931 PRINTS:PR00364
            GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006952
            GO:GO:0043531 EMBL:AB017071 IPI:IPI00520065 RefSeq:NP_188191.1
            UniGene:At.53328 ProteinModelPortal:Q9LW09 SMR:Q9LW09
            EnsemblPlants:AT3G15700.1 GeneID:820813 KEGG:ath:AT3G15700
            TAIR:At3g15700 eggNOG:NOG285000 HOGENOM:HOG000112274
            InParanoid:Q9LW09 OMA:EKLPWER PhylomeDB:Q9LW09
            ProtClustDB:CLSN2685136 Genevestigator:Q9LW09 Uniprot:Q9LW09
        Length = 375

 Score = 106 (42.4 bits), Expect = 3.0e-05, P = 3.0e-05
 Identities = 28/80 (35%), Positives = 48/80 (60%)

Query:     3 GLYGISCVGKTTLANFVGNQLRQEKI--FDEVGIATVSQDPDIIKVQGELAKSLGW---A 57
             GLYG+  VGKTT+   V N+L Q K+  FD V    VS++ ++ K+Q  + + +G+   +
Sbjct:   164 GLYGVEGVGKTTVLTQVNNRLLQHKLNGFDFVIWVFVSKNVNLEKIQDTIREKIGFLDRS 223

Query:    58 LNEKDEKERADRLRLMFSER 77
                K E+E+A ++  + S+R
Sbjct:   224 WMSKTEEEKAGKIFEILSKR 243


>TAIR|locus:2031356 [details] [associations]
            symbol:AT1G63360 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0006952 "defense response"
            evidence=IEA;ISS] [GO:0043531 "ADP binding" evidence=IEA]
            InterPro:IPR000767 InterPro:IPR002182 Pfam:PF00931 PRINTS:PR00364
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0006952
            GO:GO:0043531 EMBL:AC022355 EMBL:AC008047 eggNOG:NOG277177
            HOGENOM:HOG000238348 ProtClustDB:CLSN2682331 IPI:IPI00530317
            PIR:F96659 RefSeq:NP_176525.1 UniGene:At.66085
            ProteinModelPortal:Q9SH22 SMR:Q9SH22 PaxDb:Q9SH22 PRIDE:Q9SH22
            EnsemblPlants:AT1G63360.1 GeneID:842642 KEGG:ath:AT1G63360
            TAIR:At1g63360 InParanoid:Q9SH22 OMA:ARDETIN PhylomeDB:Q9SH22
            Genevestigator:Q9SH22 GermOnline:AT1G63360 Uniprot:Q9SH22
        Length = 884

 Score = 110 (43.8 bits), Expect = 3.6e-05, P = 3.6e-05
 Identities = 25/68 (36%), Positives = 42/68 (61%)

Query:     3 GLYGISCVGKTTLANFVGNQLRQEKIFDEVGI-ATVSQDPDIIKVQGELAKSLGWALNEK 61
             G+YG+  VGKTTL   + N   ++K   ++GI   VSQ+  + KVQ E+A+ LG   +E 
Sbjct:   176 GMYGMGGVGKTTLLTQLYNMFNKDKCGFDIGIWVVVSQEFHVEKVQDEIAQKLGLGGDEW 235

Query:    62 DEKERADR 69
              +K+++ +
Sbjct:   236 TQKDKSQK 243


>TAIR|locus:2203881 [details] [associations]
            symbol:AT1G62630 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0006952 "defense response"
            evidence=IEA;ISS] [GO:0043531 "ADP binding" evidence=IEA]
            InterPro:IPR000767 InterPro:IPR002182 Pfam:PF00931 PRINTS:PR00364
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0006952
            GO:GO:0043531 EMBL:AC007190 InterPro:IPR025875 Pfam:PF12799
            EMBL:AC005698 EMBL:U97220 IPI:IPI00529535 PIR:H96651
            RefSeq:NP_176451.1 UniGene:At.52327 ProteinModelPortal:Q9SI85
            SMR:Q9SI85 PaxDb:Q9SI85 PRIDE:Q9SI85 EnsemblPlants:AT1G62630.1
            GeneID:842560 KEGG:ath:AT1G62630 TAIR:At1g62630 eggNOG:NOG277177
            HOGENOM:HOG000238348 InParanoid:Q9SI85 OMA:WKHLMED PhylomeDB:Q9SI85
            ProtClustDB:CLSN2682331 Genevestigator:Q9SI85 GermOnline:AT1G62630
            Uniprot:Q9SI85
        Length = 893

 Score = 105 (42.0 bits), Expect = 0.00012, P = 0.00012
 Identities = 23/64 (35%), Positives = 40/64 (62%)

Query:     3 GLYGISCVGKTTLANFVGNQLRQEKIFDEVGI-ATVSQDPDIIKVQGELAKSLGWALNEK 61
             G+YG+  VGKTTL   + N   ++K   ++GI   VSQ+ ++ K+Q E+A+ LG   +E 
Sbjct:   176 GMYGMGGVGKTTLLTQLFNMFNKDKCGFDIGIWVVVSQEVNVEKIQDEIAQKLGLGGHEW 235

Query:    62 DEKE 65
              +++
Sbjct:   236 TQRD 239


>TAIR|locus:2132741 [details] [associations]
            symbol:AT4G10780 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006952 "defense
            response" evidence=IEA;ISS] [GO:0017111 "nucleoside-triphosphatase
            activity" evidence=IEA] [GO:0043531 "ADP binding" evidence=IEA]
            InterPro:IPR000767 InterPro:IPR002182 InterPro:IPR003593
            Pfam:PF00931 PRINTS:PR00364 SMART:SM00382 GO:GO:0005524
            EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006952 GO:GO:0043531
            GO:GO:0017111 HOGENOM:HOG000238348 ProtClustDB:CLSN2682239
            EMBL:AF080119 EMBL:AL161518 IPI:IPI00538199 PIR:T01899
            RefSeq:NP_192816.1 UniGene:At.65351 ProteinModelPortal:O82484
            SMR:O82484 PaxDb:O82484 PRIDE:O82484 EnsemblPlants:AT4G10780.1
            GeneID:826674 KEGG:ath:AT4G10780 TAIR:At4g10780 eggNOG:NOG269668
            InParanoid:O82484 OMA:WNCEISE PhylomeDB:O82484 ArrayExpress:O82484
            Genevestigator:O82484 Uniprot:O82484
        Length = 892

 Score = 102 (41.0 bits), Expect = 0.00026, P = 0.00026
 Identities = 29/81 (35%), Positives = 44/81 (54%)

Query:     3 GLYGISCVGKTTLANFVGNQLRQEKIFDEVGI-ATVSQDPDIIKVQGELAKSLGWA---L 58
             GLYG+  VGKTTL   + N L   K   ++ I   VS D  I K+Q ++ + LG+     
Sbjct:   177 GLYGMGGVGKTTLLTQIHNTLHDTKNGVDIVIWVVVSSDLQIHKIQEDIGEKLGFIGKEW 236

Query:    59 NEKDEKERA-DRLRLMFSERY 78
             N+K E ++A D L  +  +R+
Sbjct:   237 NKKQESQKAVDILNCLSKKRF 257


>TAIR|locus:2034770 [details] [associations]
            symbol:SUMM2 "AT1G12280" species:3702 "Arabidopsis
            thaliana" [GO:0006952 "defense response" evidence=IGI;ISS]
            [GO:0043531 "ADP binding" evidence=IEA] InterPro:IPR000767
            InterPro:IPR002182 Pfam:PF00931 PRINTS:PR00364 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0006952 GO:GO:0043531
            EMBL:AC025416 HOGENOM:HOG000238348 IPI:IPI00530385
            RefSeq:NP_172692.1 UniGene:At.42083 ProteinModelPortal:P60838
            SMR:P60838 PaxDb:P60838 PRIDE:P60838 EnsemblPlants:AT1G12280.1
            GeneID:837782 KEGG:ath:AT1G12280 TAIR:At1g12280 eggNOG:NOG247334
            InParanoid:P60838 OMA:AMASKRT PhylomeDB:P60838
            ProtClustDB:CLSN2682239 Genevestigator:P60838 GermOnline:AT1G12280
            Uniprot:P60838
        Length = 894

 Score = 100 (40.3 bits), Expect = 0.00042, P = 0.00042
 Identities = 27/69 (39%), Positives = 38/69 (55%)

Query:     3 GLYGISCVGKTTLANFVGNQLRQE-KIFDEVGIATVSQDPDIIKVQGELAKSLGWALNEK 61
             GLYG+  VGKTTL   + N+  ++   F  V    VS+ PDI ++QG++ K L     E 
Sbjct:   180 GLYGMGGVGKTTLLTRINNKFSEKCSGFGVVIWVVVSKSPDIHRIQGDIGKRLDLGGEEW 239

Query:    62 D---EKERA 67
             D   E +RA
Sbjct:   240 DNVNENQRA 248


>TAIR|locus:2034765 [details] [associations]
            symbol:AT1G12290 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0006952 "defense response"
            evidence=IEA;ISS] [GO:0043531 "ADP binding" evidence=IEA]
            [GO:0006499 "N-terminal protein myristoylation" evidence=RCA]
            InterPro:IPR000767 InterPro:IPR002182 Pfam:PF00931 PRINTS:PR00364
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0006952
            GO:GO:0043531 EMBL:AC025416 HOGENOM:HOG000238348
            ProtClustDB:CLSN2682239 IPI:IPI00516844 RefSeq:NP_172693.1
            UniGene:At.42082 ProteinModelPortal:P60839 SMR:P60839
            EnsemblPlants:AT1G12290.1 GeneID:837783 KEGG:ath:AT1G12290
            TAIR:At1g12290 eggNOG:NOG274408 InParanoid:P60839 OMA:NIEERES
            PhylomeDB:P60839 ArrayExpress:P60839 Genevestigator:P60839
            GermOnline:AT1G12290 Uniprot:P60839
        Length = 884

 Score = 97 (39.2 bits), Expect = 0.00088, P = 0.00088
 Identities = 28/81 (34%), Positives = 43/81 (53%)

Query:     3 GLYGISCVGKTTLANFVGNQLRQEKIFDEVGI-ATVSQDPDIIKVQGELAKSLGWA---L 58
             GLYG+  VGKTTL   + N+        E+ I   VS D  I K+Q E+ + +G+     
Sbjct:   179 GLYGMGGVGKTTLLTQINNRFCDTDDGVEIVIWVVVSGDLQIHKIQKEIGEKIGFIGVEW 238

Query:    59 NEKDEKERA-DRLRLMFSERY 78
             N+K E ++A D L  +  +R+
Sbjct:   239 NQKSENQKAVDILNFLSKKRF 259


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.135   0.380    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       79        79   0.00091  102 3  11 22  0.42    29
                                                     29  0.39    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  491 (52 KB)
  Total size of DFA:  88 KB (2066 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  9.27u 0.19s 9.46t   Elapsed:  00:00:01
  Total cpu time:  9.28u 0.19s 9.47t   Elapsed:  00:00:01
  Start:  Fri May 10 00:16:31 2013   End:  Fri May 10 00:16:32 2013
Back to top
the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data
