Query 044571
Match_columns 79
No_of_seqs 194 out of 2062
Neff 11.4
Searched_HMMs 29240
Date Mon Mar 25 07:36:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044571.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044571hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rlf_A Maltose/maltodextrin im 99.8 1.3E-19 4.4E-24 101.7 6.8 75 1-75 31-122 (381)
2 3tui_C Methionine import ATP-b 99.8 3.2E-19 1.1E-23 99.7 7.7 75 1-75 56-152 (366)
3 3fvq_A Fe(3+) IONS import ATP- 99.8 2.5E-19 8.4E-24 100.0 7.0 75 1-75 32-127 (359)
4 1z47_A CYSA, putative ABC-tran 99.8 9E-19 3.1E-23 97.7 6.8 75 1-75 43-134 (355)
5 3tif_A Uncharacterized ABC tra 99.8 1.2E-18 4.2E-23 92.7 6.7 75 1-75 33-133 (235)
6 2it1_A 362AA long hypothetical 99.8 1.1E-18 3.8E-23 97.5 6.6 75 1-75 31-122 (362)
7 3gfo_A Cobalt import ATP-bindi 99.8 1.8E-18 6.2E-23 93.8 7.2 75 1-75 36-132 (275)
8 1v43_A Sugar-binding transport 99.8 1.2E-18 4E-23 97.7 6.2 75 1-75 39-130 (372)
9 2yyz_A Sugar ABC transporter, 99.8 7.3E-19 2.5E-23 98.2 5.3 75 1-75 31-122 (359)
10 1g29_1 MALK, maltose transport 99.8 3.2E-18 1.1E-22 96.0 7.9 75 1-75 31-128 (372)
11 2olj_A Amino acid ABC transpor 99.8 5.9E-18 2E-22 91.3 7.5 75 1-75 52-148 (263)
12 1oxx_K GLCV, glucose, ABC tran 99.7 2E-18 6.9E-23 96.3 5.6 75 1-75 33-129 (353)
13 2pcj_A ABC transporter, lipopr 99.7 7.9E-18 2.7E-22 89.1 6.8 75 1-75 32-129 (224)
14 3d31_A Sulfate/molybdate ABC t 99.7 1.5E-18 5E-23 96.6 4.1 72 1-75 28-116 (348)
15 1g6h_A High-affinity branched- 99.7 9.6E-18 3.3E-22 90.2 6.9 75 1-75 35-142 (257)
16 1ji0_A ABC transporter; ATP bi 99.7 6.5E-18 2.2E-22 90.1 6.1 74 1-74 34-126 (240)
17 1b0u_A Histidine permease; ABC 99.7 1.1E-17 3.6E-22 90.3 6.8 75 1-75 34-141 (262)
18 1vpl_A ABC transporter, ATP-bi 99.7 8.6E-18 2.9E-22 90.4 6.5 75 1-75 43-135 (256)
19 1sgw_A Putative ABC transporte 99.7 4.4E-18 1.5E-22 89.5 5.1 74 1-75 37-123 (214)
20 2onk_A Molybdate/tungstate ABC 99.7 2.4E-18 8.2E-23 91.8 3.9 74 1-75 26-115 (240)
21 4g1u_C Hemin import ATP-bindin 99.7 6.5E-18 2.2E-22 91.3 5.3 74 1-75 39-130 (266)
22 2nq2_C Hypothetical ABC transp 99.7 6.3E-18 2.1E-22 90.8 5.1 75 1-75 33-117 (253)
23 2yz2_A Putative ABC transporte 99.7 2.4E-17 8E-22 89.1 5.5 75 1-75 35-125 (266)
24 2cbz_A Multidrug resistance-as 99.7 2.7E-17 9.2E-22 87.7 3.3 51 1-52 33-88 (237)
25 2ihy_A ABC transporter, ATP-bi 99.7 4.1E-17 1.4E-21 88.7 3.5 75 1-75 49-150 (279)
26 2qi9_C Vitamin B12 import ATP- 99.7 1.8E-16 6E-21 85.0 5.8 71 1-75 28-115 (249)
27 2pze_A Cystic fibrosis transme 99.7 6.5E-17 2.2E-21 85.8 3.4 51 1-52 36-91 (229)
28 2ff7_A Alpha-hemolysin translo 99.6 3.1E-16 1.1E-20 84.0 5.2 52 1-52 37-105 (247)
29 1mv5_A LMRA, multidrug resista 99.6 1.1E-16 3.7E-21 85.5 2.7 51 1-51 30-97 (243)
30 2d2e_A SUFC protein; ABC-ATPas 99.6 8.1E-16 2.8E-20 82.5 6.0 75 1-75 31-130 (250)
31 2ixe_A Antigen peptide transpo 99.6 3E-16 1E-20 85.0 4.1 53 1-53 47-116 (271)
32 2bbs_A Cystic fibrosis transme 99.6 1.9E-16 6.5E-21 86.5 3.3 50 1-51 66-120 (290)
33 3nh6_A ATP-binding cassette SU 99.6 1.3E-16 4.4E-21 87.7 2.3 53 1-53 82-151 (306)
34 2pjz_A Hypothetical protein ST 99.6 6.1E-16 2.1E-20 83.5 3.7 52 1-53 32-97 (263)
35 2zu0_C Probable ATP-dependent 99.6 4.4E-15 1.5E-19 80.3 7.0 52 1-52 48-120 (267)
36 3gd7_A Fusion complex of cysti 99.6 7.8E-16 2.7E-20 86.8 3.1 51 1-51 49-115 (390)
37 2ghi_A Transport protein; mult 99.6 1.2E-15 4.2E-20 82.2 3.7 52 1-52 48-115 (260)
38 3b5x_A Lipid A export ATP-bind 99.6 4.6E-15 1.6E-19 87.1 5.1 52 1-52 371-439 (582)
39 3aez_A Pantothenate kinase; tr 99.5 8.4E-15 2.9E-19 80.7 5.2 48 1-50 92-141 (312)
40 2yl4_A ATP-binding cassette SU 99.5 4.8E-15 1.7E-19 87.2 3.0 53 1-53 372-441 (595)
41 3b60_A Lipid A export ATP-bind 99.5 2.4E-14 8.3E-19 84.1 5.4 52 1-52 371-439 (582)
42 4a82_A Cystic fibrosis transme 99.5 6.9E-15 2.4E-19 86.3 1.6 52 1-52 369-437 (578)
43 3qf4_B Uncharacterized ABC tra 99.5 1.1E-14 3.8E-19 85.7 2.2 52 1-52 383-451 (598)
44 3j16_B RLI1P; ribosome recycli 99.5 1.6E-13 5.6E-18 81.0 6.9 51 2-52 381-436 (608)
45 1znw_A Guanylate kinase, GMP k 99.5 1.2E-14 4.1E-19 75.9 1.9 43 1-43 22-75 (207)
46 1yqt_A RNAse L inhibitor; ATP- 99.5 5.7E-14 1.9E-18 82.0 4.4 50 1-50 314-368 (538)
47 3sop_A Neuronal-specific septi 99.5 7.8E-14 2.7E-18 75.6 4.5 41 2-42 5-57 (270)
48 3ozx_A RNAse L inhibitor; ATP 99.5 4.8E-14 1.6E-18 82.3 3.8 52 1-52 296-353 (538)
49 3bk7_A ABC transporter ATP-bin 99.5 6.9E-14 2.4E-18 82.6 4.4 51 1-51 384-439 (607)
50 3qf4_A ABC transporter, ATP-bi 99.4 1.4E-14 4.8E-19 85.1 1.4 51 1-51 371-438 (587)
51 4f4c_A Multidrug resistance pr 99.4 1.9E-13 6.6E-18 85.9 4.6 52 1-52 446-514 (1321)
52 3asz_A Uridine kinase; cytidin 99.4 1.4E-13 4.7E-18 71.9 3.0 34 1-41 8-41 (211)
53 4f4c_A Multidrug resistance pr 99.4 9.4E-14 3.2E-18 87.3 2.7 52 2-53 1108-1176(1321)
54 3g5u_A MCG1178, multidrug resi 99.4 1.7E-13 5.9E-18 86.0 3.8 53 1-53 418-487 (1284)
55 2v9p_A Replication protein E1; 99.4 3.4E-13 1.2E-17 74.2 3.3 37 1-43 128-164 (305)
56 3b85_A Phosphate starvation-in 99.4 1.2E-13 4.1E-18 72.4 1.2 40 1-41 24-75 (208)
57 1htw_A HI0065; nucleotide-bind 99.4 4.1E-13 1.4E-17 67.8 3.0 25 1-26 35-59 (158)
58 3c8u_A Fructokinase; YP_612366 99.4 3.2E-13 1.1E-17 70.6 2.7 37 1-41 24-60 (208)
59 3g5u_A MCG1178, multidrug resi 99.3 3.8E-13 1.3E-17 84.5 2.5 51 1-51 1061-1128(1284)
60 3a00_A Guanylate kinase, GMP k 99.3 9.7E-13 3.3E-17 67.7 3.5 25 1-25 3-27 (186)
61 1ye8_A Protein THEP1, hypothet 99.3 1E-12 3.4E-17 67.5 3.3 24 2-25 3-26 (178)
62 3ozx_A RNAse L inhibitor; ATP 99.3 6E-13 2E-17 77.8 2.4 26 1-26 27-52 (538)
63 1s96_A Guanylate kinase, GMP k 99.3 1E-12 3.5E-17 69.4 2.9 25 1-25 18-42 (219)
64 1z6g_A Guanylate kinase; struc 99.3 1.5E-12 5E-17 68.6 3.4 24 1-24 25-48 (218)
65 1lvg_A Guanylate kinase, GMP k 99.3 1.9E-12 6.4E-17 67.3 3.3 24 1-24 6-29 (198)
66 3tr0_A Guanylate kinase, GMP k 99.3 1.3E-12 4.6E-17 67.7 2.8 24 1-24 9-32 (205)
67 1yqt_A RNAse L inhibitor; ATP- 99.3 1.2E-12 4.1E-17 76.5 2.8 26 1-26 49-74 (538)
68 3j16_B RLI1P; ribosome recycli 99.3 1.4E-12 4.9E-17 77.1 2.8 26 1-26 105-130 (608)
69 2iw3_A Elongation factor 3A; a 99.3 4.4E-13 1.5E-17 82.4 0.5 41 1-41 701-745 (986)
70 3szr_A Interferon-induced GTP- 99.3 3.1E-12 1.1E-16 75.7 3.7 52 2-53 48-121 (608)
71 2a5y_B CED-4; apoptosis; HET: 99.3 7.2E-11 2.5E-15 69.1 8.9 75 1-75 154-240 (549)
72 3euj_A Chromosome partition pr 99.2 3.3E-12 1.1E-16 73.9 3.0 26 1-26 31-56 (483)
73 2eyu_A Twitching motility prot 99.2 2.6E-12 8.7E-17 69.4 2.3 26 1-26 27-52 (261)
74 3bk7_A ABC transporter ATP-bin 99.2 2.8E-12 9.6E-17 75.8 2.4 26 1-26 119-144 (607)
75 1kgd_A CASK, peripheral plasma 99.2 5.9E-12 2E-16 64.5 2.8 24 1-24 7-30 (180)
76 2i3b_A HCR-ntpase, human cance 99.2 7.9E-12 2.7E-16 64.7 3.2 24 1-24 3-26 (189)
77 4gp7_A Metallophosphoesterase; 99.2 8.4E-12 2.9E-16 63.6 3.0 19 1-19 11-29 (171)
78 2npi_A Protein CLP1; CLP1-PCF1 99.2 5.9E-12 2E-16 72.5 2.6 41 1-41 140-188 (460)
79 1lw7_A Transcriptional regulat 99.2 8.4E-12 2.9E-16 69.9 2.9 25 2-26 173-197 (365)
80 1rj9_A FTSY, signal recognitio 99.2 1E-11 3.4E-16 68.3 2.8 52 1-52 104-179 (304)
81 2jeo_A Uridine-cytidine kinase 99.2 1.1E-11 3.7E-16 66.2 2.8 51 1-52 27-81 (245)
82 1tq4_A IIGP1, interferon-induc 99.2 8.7E-12 3E-16 71.0 2.5 26 1-26 71-96 (413)
83 3b9q_A Chloroplast SRP recepto 99.2 9.7E-12 3.3E-16 68.3 2.6 52 1-52 102-178 (302)
84 3lnc_A Guanylate kinase, GMP k 99.2 5.3E-12 1.8E-16 66.8 1.5 23 1-23 29-52 (231)
85 2pt7_A CAG-ALFA; ATPase, prote 99.2 1.2E-11 4.2E-16 68.6 2.9 26 1-26 173-198 (330)
86 2iw3_A Elongation factor 3A; a 99.2 6.1E-11 2.1E-15 73.2 5.9 51 1-51 463-518 (986)
87 4a74_A DNA repair and recombin 99.2 1.4E-11 4.7E-16 64.8 2.8 25 1-25 27-51 (231)
88 2gza_A Type IV secretion syste 99.2 1.9E-11 6.4E-16 68.6 3.1 55 1-55 177-250 (361)
89 1sq5_A Pantothenate kinase; P- 99.2 1.6E-11 5.5E-16 67.5 2.8 24 1-24 82-105 (308)
90 1zp6_A Hypothetical protein AT 99.1 1.6E-11 5.6E-16 63.1 2.4 22 1-22 11-32 (191)
91 1qhl_A Protein (cell division 99.1 3E-12 1E-16 68.0 -0.6 25 2-26 30-54 (227)
92 2bbw_A Adenylate kinase 4, AK4 99.1 2E-11 6.7E-16 65.2 2.3 26 1-26 29-57 (246)
93 2ehv_A Hypothetical protein PH 99.1 2.4E-11 8.4E-16 64.5 2.6 22 1-22 32-55 (251)
94 2f1r_A Molybdopterin-guanine d 99.1 9E-12 3.1E-16 63.6 0.9 26 1-26 4-29 (171)
95 3e70_C DPA, signal recognition 99.1 2.4E-11 8.3E-16 67.5 2.6 26 1-26 131-156 (328)
96 2og2_A Putative signal recogni 99.1 2.4E-11 8.3E-16 68.2 2.6 52 1-52 159-235 (359)
97 2j41_A Guanylate kinase; GMP, 99.1 3.1E-11 1E-15 62.6 2.8 25 1-25 8-32 (207)
98 2obl_A ESCN; ATPase, hydrolase 99.1 3E-11 1E-15 67.5 2.8 26 1-26 73-98 (347)
99 1kag_A SKI, shikimate kinase I 99.1 5E-11 1.7E-15 60.4 3.4 25 1-25 6-30 (173)
100 3jvv_A Twitching mobility prot 99.1 2.3E-11 7.8E-16 68.2 2.3 26 1-26 125-150 (356)
101 1u0l_A Probable GTPase ENGC; p 99.1 2.8E-11 9.7E-16 66.4 2.4 26 1-26 171-196 (301)
102 3tau_A Guanylate kinase, GMP k 99.1 3.9E-11 1.3E-15 62.7 2.8 25 1-25 10-34 (208)
103 4eun_A Thermoresistant glucoki 99.1 4E-11 1.4E-15 62.2 2.8 23 1-23 31-53 (200)
104 3kta_A Chromosome segregation 99.1 5.4E-11 1.8E-15 60.8 2.8 24 2-25 29-52 (182)
105 2yhs_A FTSY, cell division pro 99.1 4.3E-11 1.5E-15 69.4 2.6 54 1-54 295-372 (503)
106 2bdt_A BH3686; alpha-beta prot 99.1 5.7E-11 2E-15 61.1 2.7 23 1-23 4-26 (189)
107 1p9r_A General secretion pathw 99.1 6.4E-11 2.2E-15 67.6 3.0 26 1-26 169-194 (418)
108 2dpy_A FLII, flagellum-specifi 99.1 5.7E-11 2E-15 68.1 2.8 26 1-26 159-184 (438)
109 3tqc_A Pantothenate kinase; bi 99.1 6.3E-11 2.2E-15 65.6 2.8 39 1-41 94-132 (321)
110 3uie_A Adenylyl-sulfate kinase 99.1 7E-11 2.4E-15 61.3 2.8 24 1-24 27-50 (200)
111 4e22_A Cytidylate kinase; P-lo 99.1 5.3E-11 1.8E-15 63.9 2.3 26 1-26 29-57 (252)
112 2oap_1 GSPE-2, type II secreti 99.1 8.9E-11 3E-15 68.4 3.3 26 1-26 262-287 (511)
113 2ewv_A Twitching motility prot 99.1 6.8E-11 2.3E-15 66.6 2.5 26 1-26 138-163 (372)
114 2qm8_A GTPase/ATPase; G protei 99.0 9.7E-11 3.3E-15 65.2 2.6 26 1-26 57-82 (337)
115 2rcn_A Probable GTPase ENGC; Y 99.0 1.1E-10 3.9E-15 65.4 2.6 41 1-41 217-270 (358)
116 2qag_B Septin-6, protein NEDD5 99.0 9.7E-11 3.3E-15 66.9 2.3 40 2-41 45-91 (427)
117 1rz3_A Hypothetical protein rb 99.0 1.3E-10 4.6E-15 60.4 2.4 26 1-26 24-49 (201)
118 3ney_A 55 kDa erythrocyte memb 99.0 1.8E-10 6.1E-15 60.0 2.8 24 1-24 21-44 (197)
119 1cke_A CK, MSSA, protein (cyti 99.0 1.9E-10 6.4E-15 60.5 2.8 22 2-23 8-29 (227)
120 1knq_A Gluconate kinase; ALFA/ 99.0 2.2E-10 7.4E-15 58.2 2.8 23 1-23 10-32 (175)
121 2yv5_A YJEQ protein; hydrolase 99.0 2.1E-10 7.1E-15 63.0 2.8 25 1-26 167-191 (302)
122 3ec2_A DNA replication protein 99.0 2.2E-10 7.5E-15 58.5 2.5 24 2-25 41-64 (180)
123 2x8a_A Nuclear valosin-contain 99.0 4E-10 1.4E-14 61.2 3.3 24 2-25 47-70 (274)
124 1t9h_A YLOQ, probable GTPase E 99.0 4.9E-11 1.7E-15 65.7 -0.5 26 1-26 175-200 (307)
125 2vp4_A Deoxynucleoside kinase; 99.0 1.9E-10 6.6E-15 60.9 1.7 22 1-22 22-43 (230)
126 1jjv_A Dephospho-COA kinase; P 99.0 3.6E-10 1.2E-14 58.7 2.7 22 1-22 4-25 (206)
127 2kjq_A DNAA-related protein; s 98.9 2.5E-10 8.5E-15 57.1 1.8 25 2-26 39-63 (149)
128 1oix_A RAS-related protein RAB 98.9 5E-10 1.7E-14 57.7 2.9 24 2-25 32-55 (191)
129 3ux8_A Excinuclease ABC, A sub 98.9 3E-10 1E-14 67.9 2.1 16 1-16 46-61 (670)
130 1odf_A YGR205W, hypothetical 3 98.9 4.7E-10 1.6E-14 61.4 2.5 51 1-52 33-85 (290)
131 1tf7_A KAIC; homohexamer, hexa 98.9 4.2E-10 1.4E-14 65.7 2.5 26 1-26 41-68 (525)
132 1cr0_A DNA primase/helicase; R 98.9 4.6E-10 1.6E-14 61.2 2.5 26 1-26 37-62 (296)
133 2if2_A Dephospho-COA kinase; a 98.9 5.8E-10 2E-14 57.9 2.5 21 1-21 3-23 (204)
134 2qnr_A Septin-2, protein NEDD5 98.9 4.8E-10 1.6E-14 61.6 2.3 24 2-25 21-45 (301)
135 1nij_A Hypothetical protein YJ 98.9 4.1E-10 1.4E-14 62.2 1.8 23 1-23 6-28 (318)
136 4aby_A DNA repair protein RECN 98.9 1.4E-10 4.9E-15 65.6 0.0 25 1-25 62-86 (415)
137 1w1w_A Structural maintenance 98.9 8.6E-10 3E-14 63.0 2.9 26 1-26 28-53 (430)
138 2qag_C Septin-7; cell cycle, c 98.9 7.9E-10 2.7E-14 63.2 2.8 24 2-25 34-57 (418)
139 3t61_A Gluconokinase; PSI-biol 98.9 1.3E-09 4.6E-14 56.5 3.3 23 1-23 20-42 (202)
140 2qt1_A Nicotinamide riboside k 98.9 8.2E-10 2.8E-14 57.5 2.5 23 1-23 23-45 (207)
141 2f9l_A RAB11B, member RAS onco 98.9 1.2E-09 4E-14 56.5 3.0 22 2-23 8-29 (199)
142 1in4_A RUVB, holliday junction 98.9 1.4E-09 4.7E-14 60.4 3.3 22 2-23 54-75 (334)
143 1ewq_A DNA mismatch repair pro 98.9 9.1E-10 3.1E-14 66.8 2.7 24 1-24 578-601 (765)
144 2w0m_A SSO2452; RECA, SSPF, un 98.9 1E-09 3.6E-14 57.6 2.6 26 1-26 25-50 (235)
145 2qor_A Guanylate kinase; phosp 98.9 1.9E-09 6.4E-14 56.1 3.3 24 1-24 14-37 (204)
146 1ixz_A ATP-dependent metallopr 98.9 1.8E-09 6E-14 57.8 3.2 23 2-24 52-74 (254)
147 3cr8_A Sulfate adenylyltranfer 98.9 7.4E-10 2.5E-14 65.1 1.7 26 1-26 371-396 (552)
148 1wb9_A DNA mismatch repair pro 98.9 1.3E-09 4.3E-14 66.4 2.8 24 1-24 609-632 (800)
149 1f2t_A RAD50 ABC-ATPase; DNA d 98.8 1.6E-09 5.5E-14 54.1 2.6 20 2-21 26-45 (149)
150 3vaa_A Shikimate kinase, SK; s 98.8 1.8E-09 6.2E-14 56.0 2.8 22 2-23 28-49 (199)
151 1iy2_A ATP-dependent metallopr 98.8 2.2E-09 7.6E-14 58.1 3.2 23 2-24 76-98 (278)
152 1tf7_A KAIC; homohexamer, hexa 98.8 3.7E-09 1.3E-13 61.8 4.3 39 1-42 283-321 (525)
153 2px0_A Flagellar biosynthesis 98.8 3.9E-09 1.3E-13 58.0 3.9 38 1-41 107-144 (296)
154 1pui_A ENGB, probable GTP-bind 98.8 5.3E-10 1.8E-14 58.0 0.5 22 2-23 29-50 (210)
155 2o5v_A DNA replication and rep 98.8 2.4E-09 8.3E-14 60.2 2.8 22 1-22 28-49 (359)
156 3qf7_A RAD50; ABC-ATPase, ATPa 98.8 2.5E-09 8.5E-14 60.1 2.8 21 2-22 26-46 (365)
157 2pez_A Bifunctional 3'-phospho 98.8 2.4E-09 8.4E-14 54.6 2.5 25 1-25 7-31 (179)
158 2o8b_B DNA mismatch repair pro 98.8 1.8E-09 6.3E-14 67.1 2.4 24 1-25 791-814 (1022)
159 3kb2_A SPBC2 prophage-derived 98.8 3.2E-09 1.1E-13 53.5 2.8 24 1-24 3-26 (173)
160 1nlf_A Regulatory protein REPA 98.8 1.7E-08 5.8E-13 54.7 5.8 25 1-25 32-56 (279)
161 3ux8_A Excinuclease ABC, A sub 98.8 1E-09 3.5E-14 65.6 1.1 20 1-20 350-369 (670)
162 3nwj_A ATSK2; P loop, shikimat 98.8 4.5E-09 1.5E-13 56.5 3.3 24 1-24 50-73 (250)
163 1np6_A Molybdopterin-guanine d 98.8 4.1E-09 1.4E-13 54.0 2.6 25 1-25 8-32 (174)
164 3thx_B DNA mismatch repair pro 98.8 2.6E-09 8.8E-14 65.9 1.9 22 1-22 675-696 (918)
165 1ex7_A Guanylate kinase; subst 98.8 6.5E-09 2.2E-13 53.8 3.1 22 2-23 4-25 (186)
166 1vma_A Cell division protein F 98.7 4.4E-09 1.5E-13 58.0 2.6 26 1-26 106-131 (306)
167 2www_A Methylmalonic aciduria 98.7 4.7E-09 1.6E-13 58.7 2.6 25 1-25 76-100 (349)
168 1pzn_A RAD51, DNA repair and r 98.7 6.2E-09 2.1E-13 58.3 2.8 23 1-23 133-155 (349)
169 3lw7_A Adenylate kinase relate 98.7 5.7E-09 2E-13 52.5 2.5 19 1-19 3-21 (179)
170 1n0w_A DNA repair protein RAD5 98.7 6.4E-09 2.2E-13 55.0 2.7 22 1-22 26-47 (243)
171 1svm_A Large T antigen; AAA+ f 98.7 6.4E-09 2.2E-13 58.8 2.8 24 1-24 171-194 (377)
172 3thx_A DNA mismatch repair pro 98.7 5.4E-09 1.9E-13 64.6 2.7 19 1-19 664-682 (934)
173 3qkt_A DNA double-strand break 98.7 6E-09 2E-13 58.0 2.6 20 2-21 26-45 (339)
174 2wji_A Ferrous iron transport 98.7 8E-09 2.7E-13 51.9 2.9 22 2-23 6-27 (165)
175 1e69_A Chromosome segregation 98.7 3.4E-09 1.2E-13 58.6 1.5 23 1-23 26-48 (322)
176 1via_A Shikimate kinase; struc 98.7 1.1E-08 3.8E-13 52.0 3.3 23 2-24 7-29 (175)
177 1qhx_A CPT, protein (chloramph 98.7 8.2E-09 2.8E-13 52.4 2.8 22 2-23 6-27 (178)
178 2ze6_A Isopentenyl transferase 98.7 7.9E-09 2.7E-13 55.5 2.8 23 2-24 4-26 (253)
179 3qks_A DNA double-strand break 98.7 8.3E-09 2.8E-13 53.9 2.6 20 2-21 26-45 (203)
180 2jaq_A Deoxyguanosine kinase; 98.7 9.5E-09 3.3E-13 53.0 2.8 23 1-23 2-24 (205)
181 1ni3_A YCHF GTPase, YCHF GTP-b 98.7 1E-08 3.6E-13 58.2 2.8 21 2-22 23-43 (392)
182 2cvh_A DNA repair and recombin 98.7 1.1E-08 3.8E-13 53.3 2.7 21 1-21 22-42 (220)
183 1vt4_I APAF-1 related killer D 98.7 2.3E-08 8E-13 62.8 4.4 53 1-53 152-205 (1221)
184 1vht_A Dephospho-COA kinase; s 98.7 1.2E-08 4E-13 53.5 2.7 21 1-21 6-26 (218)
185 1gtv_A TMK, thymidylate kinase 98.7 3.4E-09 1.2E-13 55.2 0.6 25 1-25 2-26 (214)
186 3r20_A Cytidylate kinase; stru 98.7 1.3E-08 4.4E-13 54.3 2.8 22 2-23 12-33 (233)
187 3cm0_A Adenylate kinase; ATP-b 98.7 1.4E-08 4.8E-13 51.9 2.8 21 2-22 7-27 (186)
188 2zej_A Dardarin, leucine-rich 98.7 1.3E-08 4.4E-13 52.0 2.5 21 2-22 5-25 (184)
189 2yvu_A Probable adenylyl-sulfa 98.7 1.4E-08 4.8E-13 52.0 2.7 25 1-25 15-39 (186)
190 2wjg_A FEOB, ferrous iron tran 98.7 1.8E-08 6E-13 51.4 3.0 21 2-22 10-30 (188)
191 2gj8_A MNME, tRNA modification 98.6 1.8E-08 6.3E-13 51.0 2.8 22 2-23 7-28 (172)
192 1uf9_A TT1252 protein; P-loop, 98.6 1.5E-08 5.3E-13 52.3 2.6 22 1-22 10-31 (203)
193 1ly1_A Polynucleotide kinase; 98.6 1.8E-08 6.3E-13 51.0 2.6 20 2-21 5-24 (181)
194 1m7g_A Adenylylsulfate kinase; 98.6 1.9E-08 6.5E-13 52.6 2.7 24 1-24 27-50 (211)
195 1ega_A Protein (GTP-binding pr 98.6 1.7E-08 5.8E-13 55.5 2.6 23 1-23 10-32 (301)
196 1kht_A Adenylate kinase; phosp 98.6 2.1E-08 7.2E-13 51.3 2.8 24 1-24 5-28 (192)
197 1xjc_A MOBB protein homolog; s 98.6 2E-08 6.8E-13 51.3 2.6 25 1-25 6-30 (169)
198 1lv7_A FTSH; alpha/beta domain 98.6 2.5E-08 8.6E-13 53.4 3.2 23 2-24 48-70 (257)
199 3ake_A Cytidylate kinase; CMP 98.6 2.3E-08 7.7E-13 51.8 2.8 23 1-23 4-26 (208)
200 1sxj_E Activator 1 40 kDa subu 98.6 2.1E-08 7.1E-13 55.7 2.8 25 2-26 39-64 (354)
201 1udx_A The GTP-binding protein 98.6 1E-08 3.5E-13 58.6 1.5 23 1-23 159-181 (416)
202 3trf_A Shikimate kinase, SK; a 98.6 3.4E-08 1.1E-12 50.5 3.2 22 2-23 8-29 (185)
203 3k1j_A LON protease, ATP-depen 98.6 3.3E-08 1.1E-12 58.7 3.5 25 2-26 63-87 (604)
204 3iij_A Coilin-interacting nucl 98.6 3.9E-08 1.3E-12 50.1 3.3 23 1-23 13-35 (180)
205 1nks_A Adenylate kinase; therm 98.6 2.4E-08 8.1E-13 51.1 2.5 24 1-24 3-26 (194)
206 1q3t_A Cytidylate kinase; nucl 98.6 2.8E-08 9.5E-13 52.7 2.8 23 1-23 18-40 (236)
207 2z0h_A DTMP kinase, thymidylat 98.6 3E-08 1E-12 50.9 2.8 23 1-23 2-24 (197)
208 1ls1_A Signal recognition part 98.6 2.7E-08 9.1E-13 54.6 2.6 26 1-26 100-125 (295)
209 3lxx_A GTPase IMAP family memb 98.6 3.5E-08 1.2E-12 52.4 3.0 24 2-25 32-55 (239)
210 4eaq_A DTMP kinase, thymidylat 98.6 3.6E-08 1.2E-12 52.3 2.9 25 1-25 28-52 (229)
211 1zu4_A FTSY; GTPase, signal re 98.6 3.1E-08 1E-12 55.0 2.6 26 1-26 107-132 (320)
212 1e6c_A Shikimate kinase; phosp 98.6 5.5E-08 1.9E-12 49.1 3.3 23 1-23 4-26 (173)
213 2rhm_A Putative kinase; P-loop 98.6 3.6E-08 1.2E-12 50.5 2.6 22 2-23 8-29 (193)
214 1uj2_A Uridine-cytidine kinase 98.6 4.1E-08 1.4E-12 52.6 2.9 23 1-23 24-46 (252)
215 1y63_A LMAJ004144AAA protein; 98.6 5.3E-08 1.8E-12 49.9 3.2 21 2-22 13-33 (184)
216 3m6a_A ATP-dependent protease 98.6 4.2E-08 1.5E-12 57.7 3.1 25 2-26 111-135 (543)
217 1mky_A Probable GTP-binding pr 98.6 4.1E-08 1.4E-12 56.3 3.0 23 2-24 183-205 (439)
218 2iyv_A Shikimate kinase, SK; t 98.6 5.8E-08 2E-12 49.6 3.3 23 1-23 4-26 (184)
219 2grj_A Dephospho-COA kinase; T 98.6 4.6E-08 1.6E-12 50.8 2.8 22 1-22 14-35 (192)
220 3k53_A Ferrous iron transport 98.5 4.4E-08 1.5E-12 53.0 2.8 23 2-24 6-28 (271)
221 3fb4_A Adenylate kinase; psych 98.5 6.3E-08 2.1E-12 50.6 3.2 22 2-23 3-24 (216)
222 2p67_A LAO/AO transport system 98.5 3.9E-08 1.3E-12 54.9 2.4 25 1-25 58-82 (341)
223 2c95_A Adenylate kinase 1; tra 98.5 4.8E-08 1.6E-12 50.2 2.6 23 1-23 11-33 (196)
224 1tev_A UMP-CMP kinase; ploop, 98.5 5.4E-08 1.9E-12 49.8 2.8 22 1-22 5-26 (196)
225 2pbr_A DTMP kinase, thymidylat 98.5 5.6E-08 1.9E-12 49.8 2.8 23 1-23 2-24 (195)
226 2p5t_B PEZT; postsegregational 98.5 2.4E-08 8.3E-13 53.5 1.4 23 2-24 35-57 (253)
227 2bwj_A Adenylate kinase 5; pho 98.5 5.1E-08 1.7E-12 50.2 2.6 23 1-23 14-36 (199)
228 2v54_A DTMP kinase, thymidylat 98.5 5.5E-08 1.9E-12 50.3 2.7 23 1-23 6-28 (204)
229 2plr_A DTMP kinase, probable t 98.5 6E-08 2E-12 50.3 2.8 24 2-25 7-30 (213)
230 3dl0_A Adenylate kinase; phosp 98.5 7.7E-08 2.6E-12 50.3 3.2 22 2-23 3-24 (216)
231 1fnn_A CDC6P, cell division co 98.5 6E-07 2E-11 50.2 6.9 51 2-55 47-99 (389)
232 1gvn_B Zeta; postsegregational 98.5 4.6E-08 1.6E-12 53.5 2.3 22 2-23 36-57 (287)
233 2wwf_A Thymidilate kinase, put 98.5 6.2E-08 2.1E-12 50.3 2.6 24 1-24 12-35 (212)
234 1a7j_A Phosphoribulokinase; tr 98.5 1.7E-08 5.7E-13 55.3 0.5 24 1-24 7-30 (290)
235 1zak_A Adenylate kinase; ATP:A 98.5 8.9E-08 3E-12 50.3 3.2 23 1-23 7-29 (222)
236 1qf9_A UMP/CMP kinase, protein 98.5 7.3E-08 2.5E-12 49.3 2.6 22 1-22 8-29 (194)
237 2dhr_A FTSH; AAA+ protein, hex 98.5 8.8E-08 3E-12 55.9 3.2 23 2-24 67-89 (499)
238 1ukz_A Uridylate kinase; trans 98.5 8.1E-08 2.8E-12 49.7 2.8 22 1-22 17-38 (203)
239 2qtf_A Protein HFLX, GTP-bindi 98.5 5.9E-08 2E-12 54.7 2.4 23 2-24 182-204 (364)
240 2f6r_A COA synthase, bifunctio 98.5 6.6E-08 2.3E-12 52.7 2.4 21 1-21 77-97 (281)
241 2pt5_A Shikimate kinase, SK; a 98.5 1.1E-07 3.9E-12 47.8 3.2 22 2-23 3-24 (168)
242 2vf7_A UVRA2, excinuclease ABC 98.5 1.3E-08 4.3E-13 62.4 -0.4 24 1-24 525-549 (842)
243 1nn5_A Similar to deoxythymidy 98.5 8.5E-08 2.9E-12 49.9 2.6 24 1-24 11-34 (215)
244 1zuh_A Shikimate kinase; alpha 98.5 1.1E-07 3.6E-12 48.0 2.8 23 1-23 9-31 (168)
245 2ged_A SR-beta, signal recogni 98.5 1.2E-07 4.2E-12 48.4 3.1 22 2-23 51-72 (193)
246 1sxj_C Activator 1 40 kDa subu 98.5 1.2E-07 4.1E-12 52.7 3.1 23 2-24 49-71 (340)
247 2cdn_A Adenylate kinase; phosp 98.5 1.1E-07 3.8E-12 49.2 2.8 22 2-23 23-44 (201)
248 2qag_A Septin-2, protein NEDD5 98.5 7.8E-08 2.7E-12 54.1 2.3 22 2-23 40-61 (361)
249 2w58_A DNAI, primosome compone 98.5 1.5E-07 5E-12 48.7 3.2 23 2-24 57-79 (202)
250 3lda_A DNA repair protein RAD5 98.5 9.6E-08 3.3E-12 54.5 2.6 25 1-25 180-206 (400)
251 1zd8_A GTP:AMP phosphotransfer 98.4 1E-07 3.5E-12 50.2 2.6 22 2-23 10-31 (227)
252 3auy_A DNA double-strand break 98.4 9E-08 3.1E-12 53.9 2.4 20 2-21 28-47 (371)
253 3d3q_A TRNA delta(2)-isopenten 98.4 1.2E-07 4.1E-12 53.1 2.9 24 1-24 9-32 (340)
254 3sfz_A APAF-1, apoptotic pepti 98.4 8.1E-07 2.8E-11 55.6 6.7 55 1-55 149-207 (1249)
255 3cf0_A Transitional endoplasmi 98.4 1.5E-07 5.1E-12 51.6 3.2 23 2-24 52-74 (301)
256 1z2a_A RAS-related protein RAB 98.4 1.6E-07 5.5E-12 46.8 3.1 22 2-23 8-29 (168)
257 3b1v_A Ferrous iron uptake tra 98.4 1.4E-07 4.6E-12 51.3 2.9 22 2-23 6-27 (272)
258 2vli_A Antibiotic resistance p 98.4 6.7E-08 2.3E-12 49.2 1.6 22 2-23 8-29 (183)
259 3t34_A Dynamin-related protein 98.4 1.4E-07 4.8E-12 52.9 2.9 21 2-22 37-57 (360)
260 3tlx_A Adenylate kinase 2; str 98.4 1.5E-07 5E-12 50.3 2.8 21 2-22 32-52 (243)
261 2ce2_X GTPase HRAS; signaling 98.4 1.8E-07 6.1E-12 46.4 2.9 22 2-23 6-27 (166)
262 2dyk_A GTP-binding protein; GT 98.4 2.1E-07 7E-12 46.2 3.1 22 2-23 4-25 (161)
263 2nzj_A GTP-binding protein REM 98.4 1.8E-07 6.1E-12 47.0 2.9 22 2-23 7-28 (175)
264 3lxw_A GTPase IMAP family memb 98.4 1.9E-07 6.3E-12 50.0 3.0 22 2-23 24-45 (247)
265 2ygr_A Uvrabc system protein A 98.4 5.5E-08 1.9E-12 60.5 1.1 19 1-19 670-688 (993)
266 1aky_A Adenylate kinase; ATP:A 98.4 1.7E-07 5.7E-12 49.2 2.8 22 2-23 7-28 (220)
267 1ypw_A Transitional endoplasmi 98.4 1.5E-07 5.2E-12 57.6 2.9 24 2-25 241-264 (806)
268 2xb4_A Adenylate kinase; ATP-b 98.4 1.7E-07 5.9E-12 49.4 2.8 23 1-23 2-24 (223)
269 4fcw_A Chaperone protein CLPB; 98.4 2E-07 6.9E-12 50.9 3.1 24 2-25 50-73 (311)
270 1u8z_A RAS-related protein RAL 98.4 2.3E-07 7.8E-12 46.1 3.1 22 2-23 7-28 (168)
271 3t1o_A Gliding protein MGLA; G 98.4 2.5E-07 8.7E-12 47.2 3.3 23 2-24 17-39 (198)
272 1kao_A RAP2A; GTP-binding prot 98.4 2.3E-07 7.9E-12 46.1 3.1 22 2-23 6-27 (167)
273 1z08_A RAS-related protein RAB 98.4 2.3E-07 7.9E-12 46.3 3.1 22 2-23 9-30 (170)
274 2erx_A GTP-binding protein DI- 98.4 2.2E-07 7.6E-12 46.4 3.0 21 2-22 6-26 (172)
275 2ga8_A Hypothetical 39.9 kDa p 98.4 2.2E-07 7.4E-12 52.3 3.2 23 2-24 27-49 (359)
276 2dby_A GTP-binding protein; GD 98.4 2E-07 6.8E-12 52.7 3.0 22 2-23 4-25 (368)
277 1ky3_A GTP-binding protein YPT 98.4 2.3E-07 8E-12 46.7 3.1 22 2-23 11-32 (182)
278 3b9p_A CG5977-PA, isoform A; A 98.4 2.3E-07 7.9E-12 50.5 3.2 23 2-24 57-79 (297)
279 1z0j_A RAB-22, RAS-related pro 98.4 2.5E-07 8.4E-12 46.2 3.1 22 2-23 9-30 (170)
280 1c1y_A RAS-related protein RAP 98.4 2.6E-07 8.8E-12 46.0 3.1 22 2-23 6-27 (167)
281 1wms_A RAB-9, RAB9, RAS-relate 98.4 2.5E-07 8.6E-12 46.5 3.1 22 2-23 10-31 (177)
282 1ek0_A Protein (GTP-binding pr 98.4 2.6E-07 8.8E-12 46.1 3.1 22 2-23 6-27 (170)
283 2qby_A CDC6 homolog 1, cell di 98.4 2.3E-07 7.7E-12 51.7 3.1 24 2-25 48-71 (386)
284 3a4m_A L-seryl-tRNA(SEC) kinas 98.4 1.8E-07 6.1E-12 50.4 2.6 21 2-22 7-27 (260)
285 2ohf_A Protein OLA1, GTP-bindi 98.4 1.9E-07 6.4E-12 53.2 2.8 21 2-22 25-45 (396)
286 1svi_A GTP-binding protein YSX 98.4 2.1E-07 7E-12 47.6 2.7 22 2-23 26-47 (195)
287 3q85_A GTP-binding protein REM 98.4 2.3E-07 8E-12 46.3 2.9 21 2-22 5-25 (169)
288 3q72_A GTP-binding protein RAD 98.4 1.5E-07 5.2E-12 46.9 2.2 22 2-23 5-26 (166)
289 1g16_A RAS-related protein SEC 98.4 2.4E-07 8.2E-12 46.2 2.9 22 2-23 6-27 (170)
290 1m2o_B GTP-binding protein SAR 98.4 2.4E-07 8.2E-12 47.5 2.9 21 2-22 26-46 (190)
291 1e4v_A Adenylate kinase; trans 98.4 2.5E-07 8.4E-12 48.4 3.0 22 2-23 3-24 (214)
292 3bos_A Putative DNA replicatio 98.4 2.8E-07 9.5E-12 48.4 3.2 23 2-24 55-77 (242)
293 3pqc_A Probable GTP-binding pr 98.4 2.2E-07 7.6E-12 47.3 2.7 22 2-23 26-47 (195)
294 2fn4_A P23, RAS-related protei 98.4 2.5E-07 8.6E-12 46.6 2.9 21 2-22 12-32 (181)
295 1fzq_A ADP-ribosylation factor 98.4 1.6E-07 5.5E-12 47.8 2.2 21 2-22 19-39 (181)
296 2lkc_A Translation initiation 98.4 2.8E-07 9.6E-12 46.4 3.0 21 2-22 11-31 (178)
297 1l8q_A Chromosomal replication 98.4 2.7E-07 9.1E-12 50.9 3.1 24 2-25 40-63 (324)
298 3t5d_A Septin-7; GTP-binding p 98.4 1.7E-07 5.9E-12 50.8 2.2 21 2-22 11-31 (274)
299 1jbk_A CLPB protein; beta barr 98.4 3.2E-07 1.1E-11 46.5 3.2 24 2-25 46-69 (195)
300 1f6b_A SAR1; gtpases, N-termin 98.4 1.4E-07 4.9E-12 48.7 1.8 21 2-22 28-48 (198)
301 2oil_A CATX-8, RAS-related pro 98.4 3.2E-07 1.1E-11 46.9 3.1 22 2-23 28-49 (193)
302 2r6f_A Excinuclease ABC subuni 98.4 5.9E-08 2E-12 60.2 0.4 20 1-20 652-671 (972)
303 4dsu_A GTPase KRAS, isoform 2B 98.4 3.3E-07 1.1E-11 46.5 3.1 22 2-23 7-28 (189)
304 1r2q_A RAS-related protein RAB 98.4 3.4E-07 1.2E-11 45.6 3.1 21 2-22 9-29 (170)
305 1ltq_A Polynucleotide kinase; 98.4 2.3E-07 7.8E-12 50.7 2.6 21 2-22 5-25 (301)
306 1z6t_A APAF-1, apoptotic prote 98.4 2.3E-06 7.8E-11 50.5 7.0 40 1-40 149-190 (591)
307 2h92_A Cytidylate kinase; ross 98.4 3.8E-07 1.3E-11 47.7 3.4 23 1-23 5-27 (219)
308 2cxx_A Probable GTP-binding pr 98.4 2.5E-07 8.7E-12 47.0 2.6 22 2-23 4-25 (190)
309 3con_A GTPase NRAS; structural 98.4 3.4E-07 1.2E-11 46.7 3.1 22 2-23 24-45 (190)
310 3bc1_A RAS-related protein RAB 98.4 3.4E-07 1.2E-11 46.5 3.1 22 2-23 14-35 (195)
311 3iby_A Ferrous iron transport 98.4 2.8E-07 9.6E-12 49.6 2.8 22 2-23 4-25 (256)
312 3tw8_B RAS-related protein RAB 98.4 2.2E-07 7.6E-12 46.8 2.4 22 2-23 12-33 (181)
313 3clv_A RAB5 protein, putative; 98.3 3.5E-07 1.2E-11 46.8 3.1 22 2-23 10-31 (208)
314 3iev_A GTP-binding protein ERA 98.3 2.5E-07 8.6E-12 51.0 2.7 23 1-23 12-34 (308)
315 1r8s_A ADP-ribosylation factor 98.3 3.8E-07 1.3E-11 45.4 3.1 22 2-23 3-24 (164)
316 4ad8_A DNA repair protein RECN 98.3 5E-08 1.7E-12 57.0 -0.2 21 2-22 63-83 (517)
317 1upt_A ARL1, ADP-ribosylation 98.3 3.8E-07 1.3E-11 45.6 3.1 21 2-22 10-30 (171)
318 2hxs_A RAB-26, RAS-related pro 98.3 3.9E-07 1.3E-11 45.9 3.1 22 2-23 9-30 (178)
319 1wf3_A GTP-binding protein; GT 98.3 3.4E-07 1.1E-11 50.4 3.0 22 2-23 10-31 (301)
320 3ihw_A Centg3; RAS, centaurin, 98.3 3.8E-07 1.3E-11 46.6 3.1 21 2-22 23-43 (184)
321 2ffh_A Protein (FFH); SRP54, s 98.3 2.9E-07 9.9E-12 52.9 2.8 26 1-26 100-125 (425)
322 3crm_A TRNA delta(2)-isopenten 98.3 3.1E-07 1.1E-11 51.1 2.8 23 2-24 8-30 (323)
323 2dr3_A UPF0273 protein PH0284; 98.3 2.7E-07 9.1E-12 48.8 2.4 21 2-22 26-46 (247)
324 1nrj_B SR-beta, signal recogni 98.3 4.1E-07 1.4E-11 47.4 3.1 22 2-23 15-36 (218)
325 2y8e_A RAB-protein 6, GH09086P 98.3 3.9E-07 1.3E-11 45.8 2.9 22 2-23 17-38 (179)
326 1z0f_A RAB14, member RAS oncog 98.3 4.4E-07 1.5E-11 45.6 3.1 22 2-23 18-39 (179)
327 2z4s_A Chromosomal replication 98.3 3.8E-07 1.3E-11 52.5 3.1 23 2-24 133-155 (440)
328 2xtp_A GTPase IMAP family memb 98.3 3.4E-07 1.2E-11 49.1 2.8 22 2-23 25-46 (260)
329 2a9k_A RAS-related protein RAL 98.3 4.4E-07 1.5E-11 45.9 3.1 22 2-23 21-42 (187)
330 2g6b_A RAS-related protein RAB 98.3 4.4E-07 1.5E-11 45.7 3.1 22 2-23 13-34 (180)
331 2bov_A RAla, RAS-related prote 98.3 4.6E-07 1.6E-11 46.6 3.1 22 2-23 17-38 (206)
332 1m7b_A RND3/RHOE small GTP-bin 98.3 4.3E-07 1.5E-11 46.2 2.9 22 2-23 10-31 (184)
333 2efe_B Small GTP-binding prote 98.3 4.8E-07 1.6E-11 45.6 3.1 22 2-23 15-36 (181)
334 2bme_A RAB4A, RAS-related prot 98.3 4.5E-07 1.5E-11 46.0 2.9 22 2-23 13-34 (186)
335 2ce7_A Cell division protein F 98.3 4.2E-07 1.4E-11 52.9 3.1 23 2-24 52-74 (476)
336 1vg8_A RAS-related protein RAB 98.3 4.8E-07 1.7E-11 46.6 3.1 22 2-23 11-32 (207)
337 2e87_A Hypothetical protein PH 98.3 2.9E-07 1E-11 51.6 2.4 22 2-23 170-191 (357)
338 4ag6_A VIRB4 ATPase, type IV s 98.3 4.6E-07 1.6E-11 51.2 3.2 24 2-25 38-61 (392)
339 3a1s_A Iron(II) transport prot 98.3 4.6E-07 1.6E-11 48.8 3.0 22 2-23 8-29 (258)
340 1njg_A DNA polymerase III subu 98.3 5.3E-07 1.8E-11 47.1 3.2 23 2-24 48-70 (250)
341 2gf9_A RAS-related protein RAB 98.3 5.3E-07 1.8E-11 46.0 3.1 22 2-23 25-46 (189)
342 2cjw_A GTP-binding protein GEM 98.3 5.3E-07 1.8E-11 46.4 3.1 21 2-22 9-29 (192)
343 2fg5_A RAB-22B, RAS-related pr 98.3 4.7E-07 1.6E-11 46.4 2.9 22 2-23 26-47 (192)
344 3kkq_A RAS-related protein M-R 98.3 5.5E-07 1.9E-11 45.6 3.1 22 2-23 21-42 (183)
345 3tkl_A RAS-related protein RAB 98.3 5.5E-07 1.9E-11 46.0 3.1 22 2-23 19-40 (196)
346 3i8s_A Ferrous iron transport 98.3 4.4E-07 1.5E-11 49.2 2.8 22 2-23 6-27 (274)
347 3h4m_A Proteasome-activating n 98.3 5.5E-07 1.9E-11 48.7 3.2 23 2-24 54-76 (285)
348 3kl4_A SRP54, signal recogniti 98.3 3.1E-07 1.1E-11 52.9 2.3 26 1-26 99-124 (433)
349 3be4_A Adenylate kinase; malar 98.3 5.1E-07 1.8E-11 47.3 3.0 22 2-23 8-29 (217)
350 2gf0_A GTP-binding protein DI- 98.3 5E-07 1.7E-11 46.3 2.9 21 2-22 11-31 (199)
351 3n70_A Transport activator; si 98.3 6.2E-07 2.1E-11 44.4 3.1 22 2-23 27-48 (145)
352 1j8m_F SRP54, signal recogniti 98.3 2.2E-07 7.6E-12 51.1 1.6 26 1-26 100-125 (297)
353 1mh1_A RAC1; GTP-binding, GTPa 98.3 6E-07 2.1E-11 45.4 3.1 21 2-22 8-28 (186)
354 1moz_A ARL1, ADP-ribosylation 98.3 2E-07 6.8E-12 47.2 1.3 20 2-21 21-40 (183)
355 3oes_A GTPase rhebl1; small GT 98.3 5.4E-07 1.8E-11 46.5 2.9 22 2-23 27-48 (201)
356 3cbq_A GTP-binding protein REM 98.3 2.8E-07 9.6E-12 47.5 1.8 21 2-22 26-46 (195)
357 2ew1_A RAS-related protein RAB 98.3 5.5E-07 1.9E-11 46.7 2.9 22 2-23 29-50 (201)
358 1z06_A RAS-related protein RAB 98.3 6.3E-07 2.2E-11 45.7 3.1 22 2-23 23-44 (189)
359 2wsm_A Hydrogenase expression/ 98.3 5.6E-07 1.9E-11 47.0 2.9 22 2-23 33-54 (221)
360 1zbd_A Rabphilin-3A; G protein 98.3 6.2E-07 2.1E-11 46.2 3.0 22 2-23 11-32 (203)
361 1jal_A YCHF protein; nucleotid 98.3 5.9E-07 2E-11 50.7 3.1 22 2-23 5-26 (363)
362 2a5j_A RAS-related protein RAB 98.3 6.8E-07 2.3E-11 45.7 3.1 22 2-23 24-45 (191)
363 3dz8_A RAS-related protein RAB 98.3 6.1E-07 2.1E-11 45.9 2.9 22 2-23 26-47 (191)
364 2qz4_A Paraplegin; AAA+, SPG7, 98.3 6.7E-07 2.3E-11 47.8 3.2 23 2-24 42-64 (262)
365 3exa_A TRNA delta(2)-isopenten 98.3 5.5E-07 1.9E-11 50.0 2.8 23 2-24 6-28 (322)
366 1ksh_A ARF-like protein 2; sma 98.3 5.6E-07 1.9E-11 45.7 2.7 22 2-23 21-42 (186)
367 2p65_A Hypothetical protein PF 98.3 4.3E-07 1.5E-11 45.9 2.3 24 2-25 46-69 (187)
368 2atv_A RERG, RAS-like estrogen 98.3 7.1E-07 2.4E-11 45.8 3.1 22 2-23 31-52 (196)
369 3bwd_D RAC-like GTP-binding pr 98.3 7.4E-07 2.5E-11 45.0 3.1 21 2-22 11-31 (182)
370 3t5g_A GTP-binding protein RHE 98.3 6.6E-07 2.3E-11 45.2 2.9 21 2-22 9-29 (181)
371 1ak2_A Adenylate kinase isoenz 98.3 7.3E-07 2.5E-11 47.2 3.2 22 2-23 19-40 (233)
372 1zd9_A ADP-ribosylation factor 98.3 7.4E-07 2.5E-11 45.5 3.1 22 2-23 25-46 (188)
373 3reg_A RHO-like small GTPase; 98.3 7.4E-07 2.5E-11 45.6 3.1 22 2-23 26-47 (194)
374 2qu8_A Putative nucleolar GTP- 98.3 5.8E-07 2E-11 47.3 2.7 22 2-23 32-53 (228)
375 2bcg_Y Protein YP2, GTP-bindin 98.3 6.7E-07 2.3E-11 46.2 2.9 22 2-23 11-32 (206)
376 2p5s_A RAS and EF-hand domain 98.3 7.6E-07 2.6E-11 45.8 3.1 22 2-23 31-52 (199)
377 3zvl_A Bifunctional polynucleo 98.3 5.3E-07 1.8E-11 51.6 2.7 22 2-23 261-282 (416)
378 3llu_A RAS-related GTP-binding 98.3 6.3E-07 2.1E-11 46.1 2.8 23 2-24 23-45 (196)
379 2r62_A Cell division protease 98.3 4.1E-07 1.4E-11 48.9 2.0 23 2-24 47-69 (268)
380 3cph_A RAS-related protein SEC 98.3 8E-07 2.7E-11 46.0 3.1 22 2-23 23-44 (213)
381 1x3s_A RAS-related protein RAB 98.2 8.3E-07 2.8E-11 45.3 3.1 22 2-23 18-39 (195)
382 1gwn_A RHO-related GTP-binding 98.2 7.3E-07 2.5E-11 46.3 2.9 22 2-23 31-52 (205)
383 2o52_A RAS-related protein RAB 98.2 6.5E-07 2.2E-11 46.2 2.7 22 2-23 28-49 (200)
384 1zj6_A ADP-ribosylation factor 98.2 7.4E-07 2.5E-11 45.4 2.8 21 2-22 19-39 (187)
385 3c5c_A RAS-like protein 12; GD 98.2 8.6E-07 3E-11 45.3 3.1 22 2-23 24-45 (187)
386 2fh5_B SR-beta, signal recogni 98.2 8.6E-07 2.9E-11 46.0 3.1 22 2-23 10-31 (214)
387 1w5s_A Origin recognition comp 98.2 8.3E-06 2.9E-10 46.0 7.3 51 4-55 57-112 (412)
388 2fv8_A H6, RHO-related GTP-bin 98.2 7.9E-07 2.7E-11 46.1 2.9 22 2-23 28-49 (207)
389 2il1_A RAB12; G-protein, GDP, 98.2 5.8E-07 2E-11 46.1 2.4 22 2-23 29-50 (192)
390 1jwy_B Dynamin A GTPase domain 98.2 6.9E-07 2.4E-11 49.0 2.8 22 2-23 27-48 (315)
391 4dhe_A Probable GTP-binding pr 98.2 2.5E-07 8.5E-12 48.3 0.9 22 2-23 32-53 (223)
392 2h17_A ADP-ribosylation factor 98.2 6.8E-07 2.3E-11 45.4 2.5 21 2-22 24-44 (181)
393 3a8t_A Adenylate isopentenyltr 98.2 7.5E-07 2.5E-11 49.9 2.7 23 2-24 43-65 (339)
394 3def_A T7I23.11 protein; chlor 98.2 8.1E-07 2.8E-11 47.8 2.8 22 2-23 39-60 (262)
395 2hf9_A Probable hydrogenase ni 98.2 9E-07 3.1E-11 46.4 2.9 22 2-23 41-62 (226)
396 3hr8_A Protein RECA; alpha and 98.2 6.4E-07 2.2E-11 50.4 2.5 24 2-25 64-87 (356)
397 1h65_A Chloroplast outer envel 98.2 8.4E-07 2.9E-11 47.9 2.8 22 2-23 42-63 (270)
398 1sxj_D Activator 1 41 kDa subu 98.2 9.9E-07 3.4E-11 48.9 3.2 23 2-24 61-83 (353)
399 4bas_A ADP-ribosylation factor 98.2 6.8E-07 2.3E-11 45.8 2.4 22 2-23 20-41 (199)
400 2iwr_A Centaurin gamma 1; ANK 98.2 6E-07 2.1E-11 45.3 2.2 21 2-22 10-30 (178)
401 3pih_A Uvrabc system protein A 98.2 4.6E-07 1.6E-11 56.2 2.0 16 1-16 612-627 (916)
402 2j1l_A RHO-related GTP-binding 98.2 8.2E-07 2.8E-11 46.3 2.7 21 2-22 37-57 (214)
403 3foz_A TRNA delta(2)-isopenten 98.2 8.5E-07 2.9E-11 49.2 2.8 23 2-24 13-35 (316)
404 2f7s_A C25KG, RAS-related prot 98.2 9.2E-07 3.1E-11 46.0 2.9 21 2-22 28-48 (217)
405 2q3h_A RAS homolog gene family 98.2 9.7E-07 3.3E-11 45.4 2.9 22 2-23 23-44 (201)
406 2h57_A ADP-ribosylation factor 98.2 5E-07 1.7E-11 46.1 1.7 22 2-23 24-45 (190)
407 2gco_A H9, RHO-related GTP-bin 98.2 1E-06 3.6E-11 45.4 2.9 22 2-23 28-49 (201)
408 2aka_B Dynamin-1; fusion prote 98.2 9E-07 3.1E-11 48.2 2.7 22 2-23 29-50 (299)
409 3sr0_A Adenylate kinase; phosp 98.2 1E-06 3.5E-11 46.2 2.8 22 2-23 3-24 (206)
410 2chg_A Replication factor C sm 98.2 1.3E-06 4.6E-11 45.1 3.2 22 2-23 41-62 (226)
411 3umf_A Adenylate kinase; rossm 98.2 1.1E-06 3.9E-11 46.4 2.8 22 2-23 32-53 (217)
412 2atx_A Small GTP binding prote 98.2 1.2E-06 4.1E-11 44.8 2.9 22 2-23 21-42 (194)
413 2v1u_A Cell division control p 98.2 1.1E-06 3.9E-11 49.0 3.0 23 2-24 47-69 (387)
414 2g3y_A GTP-binding protein GEM 98.2 1.2E-06 4.1E-11 46.0 2.9 21 2-22 40-60 (211)
415 3t15_A Ribulose bisphosphate c 98.2 1.3E-06 4.3E-11 47.9 3.0 23 2-24 39-61 (293)
416 2b6h_A ADP-ribosylation factor 98.2 8.9E-07 3E-11 45.5 2.2 21 2-22 32-52 (192)
417 3ice_A Transcription terminati 98.2 1.4E-06 4.8E-11 49.8 3.1 23 2-24 177-199 (422)
418 3hws_A ATP-dependent CLP prote 98.2 1.5E-06 5E-11 48.7 3.2 22 2-23 54-75 (363)
419 4edh_A DTMP kinase, thymidylat 98.2 1.3E-06 4.6E-11 45.9 2.8 25 1-25 8-32 (213)
420 3eph_A TRNA isopentenyltransfe 98.2 1.1E-06 3.7E-11 50.3 2.6 24 1-24 4-27 (409)
421 2fu5_C RAS-related protein RAB 98.2 6.1E-07 2.1E-11 45.4 1.5 21 2-22 11-31 (183)
422 1d2n_A N-ethylmaleimide-sensit 98.2 1.6E-06 5.5E-11 46.8 3.1 22 2-23 67-88 (272)
423 2hup_A RAS-related protein RAB 98.2 1.5E-06 5.2E-11 44.9 2.9 22 2-23 32-53 (201)
424 3cnl_A YLQF, putative uncharac 98.2 1.4E-06 4.9E-11 47.1 2.8 23 2-24 102-124 (262)
425 2dy1_A Elongation factor G; tr 98.2 1.5E-06 5E-11 52.4 3.1 23 2-24 12-34 (665)
426 2ocp_A DGK, deoxyguanosine kin 98.1 1.3E-06 4.4E-11 46.5 2.6 23 1-23 4-26 (241)
427 3cpj_B GTP-binding protein YPT 98.1 1.7E-06 6E-11 45.3 3.1 22 2-23 16-37 (223)
428 3syl_A Protein CBBX; photosynt 98.1 1.5E-06 5.3E-11 47.4 3.0 24 2-25 70-93 (309)
429 3lv8_A DTMP kinase, thymidylat 98.1 1.2E-06 4.2E-11 46.8 2.5 26 1-26 29-54 (236)
430 3q3j_B RHO-related GTP-binding 98.1 1.8E-06 6.1E-11 45.1 3.1 21 2-22 30-50 (214)
431 4dcu_A GTP-binding protein ENG 98.1 9.6E-07 3.3E-11 51.0 2.2 22 2-23 26-47 (456)
432 4gzl_A RAS-related C3 botulinu 98.1 1.7E-06 5.8E-11 44.8 2.9 21 2-22 33-53 (204)
433 2qmh_A HPR kinase/phosphorylas 98.1 1.4E-06 4.7E-11 45.7 2.5 21 2-22 37-57 (205)
434 1xwi_A SKD1 protein; VPS4B, AA 98.1 1.9E-06 6.4E-11 47.8 3.2 22 2-23 48-69 (322)
435 3pvs_A Replication-associated 98.1 2.1E-06 7.3E-11 49.6 3.3 24 2-25 53-76 (447)
436 1ofh_A ATP-dependent HSL prote 98.1 2.1E-06 7.2E-11 46.8 3.2 23 2-24 53-75 (310)
437 3gmt_A Adenylate kinase; ssgci 98.1 2.3E-06 7.9E-11 45.6 3.2 22 2-23 11-32 (230)
438 2j0v_A RAC-like GTP-binding pr 98.1 2.1E-06 7.1E-11 44.5 2.9 22 2-23 12-33 (212)
439 3tqf_A HPR(Ser) kinase; transf 98.1 2.2E-06 7.4E-11 44.1 2.9 20 2-21 19-38 (181)
440 3d8b_A Fidgetin-like protein 1 98.1 2.4E-06 8.3E-11 47.9 3.2 23 2-24 120-142 (357)
441 3p32_A Probable GTPase RV1496/ 98.1 2E-06 6.7E-11 48.3 2.8 23 1-23 81-103 (355)
442 3pfi_A Holliday junction ATP-d 98.1 2.8E-06 9.7E-11 47.0 3.4 23 2-24 58-80 (338)
443 3eie_A Vacuolar protein sortin 98.1 2.4E-06 8.4E-11 47.2 3.1 23 2-24 54-76 (322)
444 3v9p_A DTMP kinase, thymidylat 98.1 1.1E-06 3.8E-11 46.7 1.6 25 1-25 27-51 (227)
445 1p5z_B DCK, deoxycytidine kina 98.1 8.4E-07 2.9E-11 47.7 1.2 23 1-23 26-48 (263)
446 3ld9_A DTMP kinase, thymidylat 98.1 2.2E-06 7.5E-11 45.5 2.7 25 1-25 23-47 (223)
447 4tmk_A Protein (thymidylate ki 98.1 2E-06 6.7E-11 45.3 2.5 26 1-26 5-30 (213)
448 2yc2_C IFT27, small RAB-relate 98.1 6.1E-07 2.1E-11 46.2 0.5 21 2-22 23-43 (208)
449 2qby_B CDC6 homolog 3, cell di 98.1 2.6E-06 8.8E-11 47.7 3.0 22 2-23 48-69 (384)
450 2qp9_X Vacuolar protein sortin 98.1 2.9E-06 1E-10 47.6 3.2 23 2-24 87-109 (355)
451 4djt_A GTP-binding nuclear pro 98.1 5.8E-07 2E-11 46.8 0.3 21 2-22 14-34 (218)
452 2x77_A ADP-ribosylation factor 98.1 1.1E-06 3.6E-11 44.9 1.3 20 2-21 25-44 (189)
453 1ypw_A Transitional endoplasmi 98.1 1.6E-06 5.3E-11 53.3 2.1 25 2-26 514-538 (806)
454 1um8_A ATP-dependent CLP prote 98.1 3.1E-06 1.1E-10 47.6 3.2 22 2-23 75-96 (376)
455 2bjv_A PSP operon transcriptio 98.1 3.2E-06 1.1E-10 45.4 3.1 23 2-24 32-54 (265)
456 1ko7_A HPR kinase/phosphatase; 98.1 2.9E-06 9.9E-11 47.1 2.9 20 2-21 147-166 (314)
457 2qgz_A Helicase loader, putati 98.1 3.4E-06 1.2E-10 46.6 3.2 23 2-24 155-177 (308)
458 3uk6_A RUVB-like 2; hexameric 98.0 3.2E-06 1.1E-10 47.2 3.0 24 2-25 73-96 (368)
459 3co5_A Putative two-component 98.0 9E-07 3.1E-11 43.7 0.7 23 2-24 30-52 (143)
460 2v3c_C SRP54, signal recogniti 98.0 2E-06 6.9E-11 49.5 2.2 24 1-24 101-124 (432)
461 1wxq_A GTP-binding protein; st 98.0 2.7E-06 9.3E-11 48.5 2.7 22 2-23 3-24 (397)
462 2zr9_A Protein RECA, recombina 98.0 2.7E-06 9.3E-11 47.8 2.6 22 2-23 64-85 (349)
463 3tmk_A Thymidylate kinase; pho 98.0 3.2E-06 1.1E-10 44.7 2.6 25 1-25 7-31 (216)
464 4b4t_K 26S protease regulatory 98.0 4E-06 1.4E-10 48.3 3.2 24 2-25 209-232 (428)
465 3llm_A ATP-dependent RNA helic 98.0 4E-06 1.4E-10 44.4 3.0 20 2-21 79-98 (235)
466 1puj_A YLQF, conserved hypothe 98.0 3.7E-06 1.3E-10 46.0 2.8 22 2-23 123-144 (282)
467 1g8f_A Sulfate adenylyltransfe 98.0 2.9E-06 9.8E-11 49.9 2.5 24 2-25 398-421 (511)
468 1hqc_A RUVB; extended AAA-ATPa 98.0 2.6E-06 8.8E-11 46.8 2.2 23 2-24 41-63 (324)
469 3r7w_A Gtpase1, GTP-binding pr 98.0 4.1E-06 1.4E-10 46.2 2.9 21 2-22 6-26 (307)
470 4i1u_A Dephospho-COA kinase; s 98.0 4.3E-06 1.5E-10 44.1 2.8 20 2-21 12-31 (210)
471 3gj0_A GTP-binding nuclear pro 98.0 2.6E-06 8.9E-11 44.5 2.0 22 2-23 18-40 (221)
472 4b4t_M 26S protease regulatory 98.0 4.6E-06 1.6E-10 48.1 3.2 24 2-25 218-241 (434)
473 4b4t_L 26S protease subunit RP 98.0 4.7E-06 1.6E-10 48.1 3.2 24 2-25 218-241 (437)
474 2zan_A Vacuolar protein sortin 98.0 4.9E-06 1.7E-10 48.0 3.1 22 2-23 170-191 (444)
475 1m8p_A Sulfate adenylyltransfe 98.0 4.1E-06 1.4E-10 49.8 2.8 23 2-24 399-421 (573)
476 2hjg_A GTP-binding protein ENG 98.0 3.1E-06 1.1E-10 48.6 2.2 22 2-23 6-27 (436)
477 2qen_A Walker-type ATPase; unk 98.0 4.2E-06 1.4E-10 46.1 2.7 21 2-22 34-54 (350)
478 3fdi_A Uncharacterized protein 98.0 4.5E-06 1.5E-10 43.5 2.7 24 1-24 8-31 (201)
479 1g41_A Heat shock protein HSLU 98.0 6.1E-06 2.1E-10 47.8 3.4 25 2-26 53-77 (444)
480 2fna_A Conserved hypothetical 98.0 4.3E-06 1.5E-10 46.1 2.6 22 2-23 33-54 (357)
481 3dm5_A SRP54, signal recogniti 98.0 4.5E-06 1.6E-10 48.3 2.7 25 1-25 102-126 (443)
482 1zcb_A G alpha I/13; GTP-bindi 98.0 5.2E-06 1.8E-10 46.9 2.9 21 2-22 36-56 (362)
483 3geh_A MNME, tRNA modification 98.0 5.2E-06 1.8E-10 48.2 2.9 22 2-23 227-248 (462)
484 4b4t_J 26S protease regulatory 98.0 6.1E-06 2.1E-10 47.3 3.1 23 3-25 186-208 (405)
485 1x6v_B Bifunctional 3'-phospho 98.0 5E-06 1.7E-10 49.9 2.8 22 2-23 55-76 (630)
486 4hlc_A DTMP kinase, thymidylat 98.0 6.1E-06 2.1E-10 43.2 2.8 24 1-24 4-27 (205)
487 1sxj_A Activator 1 95 kDa subu 97.9 6.9E-06 2.4E-10 48.1 3.2 22 2-23 80-101 (516)
488 3th5_A RAS-related C3 botulinu 97.2 1.2E-06 3.9E-11 45.3 0.0 21 2-22 33-53 (204)
489 2x2e_A Dynamin-1; nitration, h 97.9 2.9E-06 9.9E-11 47.5 1.6 22 2-23 34-55 (353)
490 3ec1_A YQEH GTPase; atnos1, at 97.9 7.2E-06 2.5E-10 46.3 3.1 21 2-22 165-185 (369)
491 1c9k_A COBU, adenosylcobinamid 97.9 7.8E-06 2.7E-10 42.1 3.0 22 1-22 1-22 (180)
492 2r44_A Uncharacterized protein 97.9 5.4E-06 1.9E-10 45.8 2.5 23 2-24 49-71 (331)
493 3pxg_A Negative regulator of g 97.9 5.7E-06 2E-10 48.0 2.7 22 2-23 204-225 (468)
494 2r6a_A DNAB helicase, replicat 97.9 2E-05 6.8E-10 45.6 4.9 39 2-43 206-244 (454)
495 3vfd_A Spastin; ATPase, microt 97.9 8.8E-06 3E-10 46.1 3.2 23 2-24 151-173 (389)
496 1jr3_A DNA polymerase III subu 97.9 9E-06 3.1E-10 45.3 3.2 23 2-24 41-63 (373)
497 2qpt_A EH domain-containing pr 97.9 6.9E-06 2.3E-10 48.6 2.7 22 2-23 68-89 (550)
498 1yrb_A ATP(GTP)binding protein 97.9 7.4E-06 2.5E-10 43.8 2.6 23 2-24 17-39 (262)
499 2axn_A 6-phosphofructo-2-kinas 97.9 7.4E-06 2.5E-10 48.2 2.8 22 2-23 38-59 (520)
500 3sjy_A Translation initiation 97.9 8.3E-06 2.8E-10 46.5 2.9 21 2-22 11-31 (403)
No 1
>3rlf_A Maltose/maltodextrin import ATP-binding protein M; integral membrane protein, ATPase, ABC transporter, membrane transmembrane; HET: UMQ MAL PGV ANP; 2.20A {Escherichia coli} PDB: 1q1e_A 1q12_A* 2awo_A* 3fh6_A 3puv_A* 3puw_A* 3pux_A* 3puy_A* 3puz_A* 3pv0_A* 2awn_A* 2r6g_A* 1q1b_A
Probab=99.80 E-value=1.3e-19 Score=101.74 Aligned_cols=75 Identities=17% Similarity=0.240 Sum_probs=56.7
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccC---CCCc----------EEEEEecCCccH---HHHHHHHHHHhcC-CCChhhH
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEK---IFDE----------VGIATVSQDPDI---IKVQGELAKSLGW-ALNEKDE 63 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~---~~~~----------~~~~~v~q~~~~---~~v~~~i~~~~~~-~~~~~~~ 63 (79)
+++|+||||||||||+|+|+|+++|+. .+++ +.++||||++.+ +++.+|+...+.. .....+.
T Consensus 31 ~~~llGpsGsGKSTLLr~iaGl~~p~~G~I~i~G~~~~~~~~~~r~ig~VfQ~~~l~p~ltV~eni~~~~~~~~~~~~~~ 110 (381)
T 3rlf_A 31 FVVFVGPSGCGKSTLLRMIAGLETITSGDLFIGEKRMNDTPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAGAKKEVI 110 (381)
T ss_dssp EEEEECCTTSSHHHHHHHHHTSSCCSEEEEEETTEECTTCCGGGSCEEEECTTCCCCTTSCHHHHHTHHHHHTTCCHHHH
T ss_pred EEEEEcCCCchHHHHHHHHHcCCCCCCeEEEECCEECCCCCHHHCCEEEEecCCcCCCCCCHHHHHHHHHHHcCCCHHHH
Confidence 478999999999999999999999872 2222 358999999843 6899999876642 2334444
Q ss_pred HHHHHHHHHHHh
Q 044571 64 KERADRLRLMFS 75 (79)
Q Consensus 64 ~~~~~~l~~~l~ 75 (79)
.+++.++++.++
T Consensus 111 ~~~v~~~l~~~~ 122 (381)
T 3rlf_A 111 NQRVNQVAEVLQ 122 (381)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHcC
Confidence 567788888776
No 2
>3tui_C Methionine import ATP-binding protein METN; ABC-transporter, type I ABC type importer, methionine uptake transporter, membrane protein; HET: ADP; 2.90A {Escherichia coli} PDB: 3tuj_C 3tuz_C* 3dhw_C
Probab=99.80 E-value=3.2e-19 Score=99.67 Aligned_cols=75 Identities=25% Similarity=0.300 Sum_probs=56.8
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccC---CCCc---------------EEEEEecCCccH---HHHHHHHHHHhcC-CC
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEK---IFDE---------------VGIATVSQDPDI---IKVQGELAKSLGW-AL 58 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~---~~~~---------------~~~~~v~q~~~~---~~v~~~i~~~~~~-~~ 58 (79)
+++|+||||||||||+|+|+|+++|+. .+++ +.++||||++++ +++.+|+...+.. ..
T Consensus 56 i~~IiGpnGaGKSTLlr~i~GL~~p~~G~I~i~G~~i~~~~~~~~~~~r~~Ig~v~Q~~~l~~~~TV~env~~~~~~~~~ 135 (366)
T 3tui_C 56 IYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELTTLSESELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELDNT 135 (366)
T ss_dssp EEEEECCTTSSHHHHHHHHHTSSCCSEEEEEETTEECSSCCHHHHHHHHTTEEEECSSCCCCTTSCHHHHHHHHHHHSCC
T ss_pred EEEEEcCCCchHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHhCcEEEEeCCCccCCCCCHHHHHHHHHHhcCC
Confidence 479999999999999999999999872 2222 258999999854 5899999876542 23
Q ss_pred ChhhHHHHHHHHHHHHh
Q 044571 59 NEKDEKERADRLRLMFS 75 (79)
Q Consensus 59 ~~~~~~~~~~~l~~~l~ 75 (79)
...+..+++.++++.++
T Consensus 136 ~~~~~~~~v~~lL~~vg 152 (366)
T 3tui_C 136 PKDEVKRRVTELLSLVG 152 (366)
T ss_dssp CHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHcC
Confidence 34445567888888876
No 3
>3fvq_A Fe(3+) IONS import ATP-binding protein FBPC; nucleotide binding domain, ABC motor domain, ferric iron TRA ATP-binding, cell inner membrane; HET: ATP; 1.90A {Neisseria gonorrhoeae}
Probab=99.79 E-value=2.5e-19 Score=99.98 Aligned_cols=75 Identities=20% Similarity=0.237 Sum_probs=56.0
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccC---CCC--------------cEEEEEecCCccH---HHHHHHHHHHhcCC-CC
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEK---IFD--------------EVGIATVSQDPDI---IKVQGELAKSLGWA-LN 59 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~---~~~--------------~~~~~~v~q~~~~---~~v~~~i~~~~~~~-~~ 59 (79)
+++|+||||||||||+|+|+|+++|+. .++ .+.++||||++.+ +++.+|+...+... ..
T Consensus 32 ~~~llGpsGsGKSTLLr~iaGl~~p~~G~I~i~G~~i~~~~~~~~~~~r~ig~vfQ~~~l~p~ltV~eni~~~l~~~~~~ 111 (359)
T 3fvq_A 32 ILFIIGASGCGKTTLLRCLAGFEQPDSGEISLSGKTIFSKNTNLPVRERRLGYLVQEGVLFPHLTVYRNIAYGLGNGKGR 111 (359)
T ss_dssp EEEEEESTTSSHHHHHHHHHTSSCCSEEEEEETTEEEESSSCBCCGGGSCCEEECTTCCCCTTSCHHHHHHTTSTTSSCC
T ss_pred EEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEECcccccccchhhCCEEEEeCCCcCCCCCCHHHHHHHHHHHcCCC
Confidence 478999999999999999999999871 122 1358999999743 68999998765432 23
Q ss_pred hhhHHHHHHHHHHHHh
Q 044571 60 EKDEKERADRLRLMFS 75 (79)
Q Consensus 60 ~~~~~~~~~~l~~~l~ 75 (79)
..+..+++.++++.++
T Consensus 112 ~~~~~~~v~~~l~~~g 127 (359)
T 3fvq_A 112 TAQERQRIEAMLELTG 127 (359)
T ss_dssp SHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHcC
Confidence 3344557788888876
No 4
>1z47_A CYSA, putative ABC-transporter ATP-binding protein; alpha/beta motif, beta sandwich, ligand binding protein; 1.90A {Alicyclobacillus acidocaldarius}
Probab=99.77 E-value=9e-19 Score=97.67 Aligned_cols=75 Identities=23% Similarity=0.259 Sum_probs=55.2
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccC---CCC----------cEEEEEecCCcc---HHHHHHHHHHHhcC-CCChhhH
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEK---IFD----------EVGIATVSQDPD---IIKVQGELAKSLGW-ALNEKDE 63 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~---~~~----------~~~~~~v~q~~~---~~~v~~~i~~~~~~-~~~~~~~ 63 (79)
+++|+||||||||||+|+|+|+++|+. .++ .+.++||||++. .+++.+|+...+.. .....+.
T Consensus 43 ~~~llGpnGsGKSTLLr~iaGl~~p~~G~I~i~g~~i~~~~~~~r~ig~v~Q~~~l~~~ltv~eni~~~l~~~~~~~~~~ 122 (355)
T 1z47_A 43 MVGLLGPSGSGKTTILRLIAGLERPTKGDVWIGGKRVTDLPPQKRNVGLVFQNYALFQHMTVYDNVSFGLREKRVPKDEM 122 (355)
T ss_dssp EEEEECSTTSSHHHHHHHHHTSSCCSEEEEEETTEECTTCCGGGSSEEEECGGGCCCTTSCHHHHHHHHHHHTTCCHHHH
T ss_pred EEEEECCCCCcHHHHHHHHhCCCCCCccEEEECCEECCcCChhhCcEEEEecCcccCCCCCHHHHHHHHHHHcCCCHHHH
Confidence 478999999999999999999998872 222 235899999974 36899999876532 2233334
Q ss_pred HHHHHHHHHHHh
Q 044571 64 KERADRLRLMFS 75 (79)
Q Consensus 64 ~~~~~~l~~~l~ 75 (79)
.+++.++++.++
T Consensus 123 ~~~v~~~l~~~g 134 (355)
T 1z47_A 123 DARVRELLRFMR 134 (355)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHcC
Confidence 456778888776
No 5
>3tif_A Uncharacterized ABC transporter ATP-binding prote; nucleotide-binding domain, ABC transporter ATPase; HET: ADP; 1.80A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} PDB: 1l2t_A* 1f3o_A*
Probab=99.77 E-value=1.2e-18 Score=92.71 Aligned_cols=75 Identities=20% Similarity=0.255 Sum_probs=53.6
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccC---CCCc----------------EEEEEecCCccH---HHHHHHHHHHhcCC-
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEK---IFDE----------------VGIATVSQDPDI---IKVQGELAKSLGWA- 57 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~---~~~~----------------~~~~~v~q~~~~---~~v~~~i~~~~~~~- 57 (79)
+++|+||||||||||+++|+|+++|+. .+++ ..++|+||++.. .++.+++.......
T Consensus 33 ~~~iiG~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~Q~~~l~~~~tv~enl~~~~~~~~ 112 (235)
T 3tif_A 33 FVSIMGPSGSGKSTMLNIIGCLDKPTEGEVYIDNIKTNDLDDDELTKIRRDKIGFVFQQFNLIPLLTALENVELPLIFKY 112 (235)
T ss_dssp EEEEECSTTSSHHHHHHHHTTSSCCSEEEEEETTEECTTCCHHHHHHHHHHHEEEECTTCCCCTTSCHHHHHHHHHHTCS
T ss_pred EEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHhhccEEEEecCCccCCCCcHHHHHHHHHHhhh
Confidence 479999999999999999999999872 2222 248999999854 58999988765321
Q ss_pred ---CChhhHHHHHHHHHHHHh
Q 044571 58 ---LNEKDEKERADRLRLMFS 75 (79)
Q Consensus 58 ---~~~~~~~~~~~~l~~~l~ 75 (79)
....+..+++.++++.++
T Consensus 113 ~~~~~~~~~~~~~~~~l~~~~ 133 (235)
T 3tif_A 113 RGAMSGEERRKRALECLKMAE 133 (235)
T ss_dssp SSCCCHHHHHHHHHHHHHHTT
T ss_pred ccCCCHHHHHHHHHHHHHHCC
Confidence 223333446666777665
No 6
>2it1_A 362AA long hypothetical maltose/maltodextrin transport ATP-binding protein; structural genomics, NPPSFA; 1.94A {Pyrococcus horikoshii}
Probab=99.77 E-value=1.1e-18 Score=97.53 Aligned_cols=75 Identities=21% Similarity=0.251 Sum_probs=55.0
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccC---CCCc----------EEEEEecCCcc---HHHHHHHHHHHhcC-CCChhhH
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEK---IFDE----------VGIATVSQDPD---IIKVQGELAKSLGW-ALNEKDE 63 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~---~~~~----------~~~~~v~q~~~---~~~v~~~i~~~~~~-~~~~~~~ 63 (79)
+++|+||||||||||+|+|+|+++|+. .+++ +.++||||++. .+++.+|+...+.. .....+.
T Consensus 31 ~~~llGpnGsGKSTLLr~iaGl~~p~~G~I~i~g~~i~~~~~~~r~ig~v~Q~~~l~~~ltv~eni~~~~~~~~~~~~~~ 110 (362)
T 2it1_A 31 FMALLGPSGSGKSTLLYTIAGIYKPTSGKIYFDEKDVTELPPKDRNVGLVFQNWALYPHMTVYKNIAFPLELRKAPREEI 110 (362)
T ss_dssp EEEEECCTTSSHHHHHHHHHTSSCCSEEEEEETTEECTTSCGGGTTEEEECTTCCCCTTSCHHHHHHHHHHHTTCCHHHH
T ss_pred EEEEECCCCchHHHHHHHHhcCCCCCceEEEECCEECCcCCHhHCcEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHH
Confidence 478999999999999999999998872 2222 35899999974 36899999876532 2233334
Q ss_pred HHHHHHHHHHHh
Q 044571 64 KERADRLRLMFS 75 (79)
Q Consensus 64 ~~~~~~l~~~l~ 75 (79)
.+++.++++.++
T Consensus 111 ~~~v~~~l~~~~ 122 (362)
T 2it1_A 111 DKKVREVAKMLH 122 (362)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHcC
Confidence 456777888776
No 7
>3gfo_A Cobalt import ATP-binding protein CBIO 1; structural genomics, cell membrane, cobalt transport, hydrolase, ION transport; 2.30A {Clostridium perfringens atcc 13124}
Probab=99.77 E-value=1.8e-18 Score=93.80 Aligned_cols=75 Identities=27% Similarity=0.310 Sum_probs=54.5
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccC---CCCc--------------EEEEEecCCccH----HHHHHHHHHHhcC-CC
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEK---IFDE--------------VGIATVSQDPDI----IKVQGELAKSLGW-AL 58 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~---~~~~--------------~~~~~v~q~~~~----~~v~~~i~~~~~~-~~ 58 (79)
+++|+||||||||||+++|+|+++|+. .+++ ..++||||+++. .++.+++...... ..
T Consensus 36 ~~~iiGpnGsGKSTLl~~l~Gl~~p~~G~I~~~G~~i~~~~~~~~~~~~~ig~v~Q~~~~~~~~~tv~e~l~~~~~~~~~ 115 (275)
T 3gfo_A 36 VTAILGGNGVGKSTLFQNFNGILKPSSGRILFDNKPIDYSRKGIMKLRESIGIVFQDPDNQLFSASVYQDVSFGAVNMKL 115 (275)
T ss_dssp EEEEECCTTSSHHHHHHHHTTSSCCSEEEEEETTEECCCSHHHHHHHHHSEEEECSSGGGTCCSSBHHHHHHHHHHTSCC
T ss_pred EEEEECCCCCCHHHHHHHHHcCCCCCCeEEEECCEECCcccccHHHHhCcEEEEEcCcccccccCcHHHHHHHHHHHcCC
Confidence 479999999999999999999998872 2222 258999998732 4788888776532 23
Q ss_pred ChhhHHHHHHHHHHHHh
Q 044571 59 NEKDEKERADRLRLMFS 75 (79)
Q Consensus 59 ~~~~~~~~~~~l~~~l~ 75 (79)
...+..+++.++++.++
T Consensus 116 ~~~~~~~~~~~~l~~~~ 132 (275)
T 3gfo_A 116 PEDEIRKRVDNALKRTG 132 (275)
T ss_dssp CHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHcC
Confidence 33444556777888776
No 8
>1v43_A Sugar-binding transport ATP-binding protein; ATPase, active transport, sugar uptake and regulation, transport protein; 2.20A {Pyrococcus horikoshii} SCOP: b.40.6.3 b.40.6.3 c.37.1.12 PDB: 1vci_A*
Probab=99.76 E-value=1.2e-18 Score=97.71 Aligned_cols=75 Identities=20% Similarity=0.222 Sum_probs=51.6
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccC---CCCc----------EEEEEecCCccH---HHHHHHHHHHhcCC-CChhhH
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEK---IFDE----------VGIATVSQDPDI---IKVQGELAKSLGWA-LNEKDE 63 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~---~~~~----------~~~~~v~q~~~~---~~v~~~i~~~~~~~-~~~~~~ 63 (79)
+++|+||||||||||+|+|+|+++|+. .+++ +.++||||++.+ +++.+|+...+... ....+.
T Consensus 39 ~~~llGpnGsGKSTLLr~iaGl~~p~~G~I~i~g~~i~~~~~~~r~ig~v~Q~~~l~~~ltv~eni~~~~~~~~~~~~~~ 118 (372)
T 1v43_A 39 FLVLLGPSGCGKTTTLRMIAGLEEPTEGRIYFGDRDVTYLPPKDRNISMVFQSYAVWPHMTVYENIAFPLKIKKFPKDEI 118 (372)
T ss_dssp EEEEECCTTSSHHHHHHHHHTSSCCSEEEEEETTEECTTSCGGGGTEEEEEC------CCCHHHHHHTTCC--CCCHHHH
T ss_pred EEEEECCCCChHHHHHHHHHcCCCCCceEEEECCEECCCCChhhCcEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHH
Confidence 478999999999999999999998872 2222 358999999744 58899987654322 233334
Q ss_pred HHHHHHHHHHHh
Q 044571 64 KERADRLRLMFS 75 (79)
Q Consensus 64 ~~~~~~l~~~l~ 75 (79)
.+++.++++.++
T Consensus 119 ~~~v~~~l~~~~ 130 (372)
T 1v43_A 119 DKRVRWAAELLQ 130 (372)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHcC
Confidence 456778888776
No 9
>2yyz_A Sugar ABC transporter, ATP-binding protein; sugar transport, alpha and beta proteins (A/B) TM0421, structural genomics, NPPSFA; 2.11A {Thermotoga maritima}
Probab=99.76 E-value=7.3e-19 Score=98.17 Aligned_cols=75 Identities=20% Similarity=0.204 Sum_probs=54.0
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccC---CCCc----------EEEEEecCCcc---HHHHHHHHHHHhcCCC-ChhhH
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEK---IFDE----------VGIATVSQDPD---IIKVQGELAKSLGWAL-NEKDE 63 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~---~~~~----------~~~~~v~q~~~---~~~v~~~i~~~~~~~~-~~~~~ 63 (79)
+++|+||||||||||+|+|+|+++|+. .+++ +.++||||++. .+++.+|+...+.... ...+.
T Consensus 31 ~~~llGpnGsGKSTLLr~iaGl~~p~~G~I~i~g~~i~~~~~~~r~ig~v~Q~~~l~~~ltv~eni~~~~~~~~~~~~~~ 110 (359)
T 2yyz_A 31 FVALLGPSGCGKTTTLLMLAGIYKPTSGEIYFDDVLVNDIPPKYREVGMVFQNYALYPHMTVFENIAFPLRARRISKDEV 110 (359)
T ss_dssp EEEEECSTTSSHHHHHHHHHTSSCCSEEEEEETTEECTTSCGGGTTEEEECSSCCCCTTSCHHHHHHGGGSSSCSHHHHT
T ss_pred EEEEEcCCCchHHHHHHHHHCCCCCCccEEEECCEECCCCChhhCcEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHH
Confidence 478999999999999999999998871 2221 35899999974 3689999987654322 22222
Q ss_pred HHHHHHHHHHHh
Q 044571 64 KERADRLRLMFS 75 (79)
Q Consensus 64 ~~~~~~l~~~l~ 75 (79)
.+++.++++.++
T Consensus 111 ~~~v~~~l~~~~ 122 (359)
T 2yyz_A 111 EKRVVEIARKLL 122 (359)
T ss_dssp THHHHHHHHHTT
T ss_pred HHHHHHHHHHcC
Confidence 346777777776
No 10
>1g29_1 MALK, maltose transport protein MALK; ATPase, active transport, maltose uptake and regulation, sugar binding protein; 1.90A {Thermococcus litoralis} SCOP: b.40.6.3 b.40.6.3 c.37.1.12 PDB: 2d62_A
Probab=99.76 E-value=3.2e-18 Score=95.97 Aligned_cols=75 Identities=20% Similarity=0.217 Sum_probs=55.0
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccC---CCC----------------cEEEEEecCCcc---HHHHHHHHHHHhcC-C
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEK---IFD----------------EVGIATVSQDPD---IIKVQGELAKSLGW-A 57 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~---~~~----------------~~~~~~v~q~~~---~~~v~~~i~~~~~~-~ 57 (79)
+++|+||||||||||+|+|+|+++|+. .++ .+.++||||++. .+++.+|+...+.. .
T Consensus 31 ~~~llGpnGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~~~~~~~~r~ig~v~Q~~~l~~~ltv~eni~~~~~~~~ 110 (372)
T 1g29_1 31 FMILLGPSGCGKTTTLRMIAGLEEPSRGQIYIGDKLVADPEKGIFVPPKDRDIAMVFQSYALYPHMTVYDNIAFPLKLRK 110 (372)
T ss_dssp EEEEECSTTSSHHHHHHHHHTSSCCSEEEEEETTEEEEEGGGTEECCGGGSSEEEECSCCCCCTTSCHHHHHHHHHHHTT
T ss_pred EEEEECCCCcHHHHHHHHHHcCCCCCccEEEECCEECccccccccCCHhHCCEEEEeCCCccCCCCCHHHHHHHHHHHcC
Confidence 478999999999999999999998871 121 134899999974 36899999876532 2
Q ss_pred CChhhHHHHHHHHHHHHh
Q 044571 58 LNEKDEKERADRLRLMFS 75 (79)
Q Consensus 58 ~~~~~~~~~~~~l~~~l~ 75 (79)
....+..+++.++++.++
T Consensus 111 ~~~~~~~~~v~~~l~~~~ 128 (372)
T 1g29_1 111 VPRQEIDQRVREVAELLG 128 (372)
T ss_dssp CCHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHCC
Confidence 233334456778888776
No 11
>2olj_A Amino acid ABC transporter; ABC domain, ATPase, hydrolase; HET: ADP; 2.05A {Geobacillus stearothermophilus} PDB: 2olk_A* 2ouk_A 2q0h_A* 3c4j_A* 3c41_J*
Probab=99.75 E-value=5.9e-18 Score=91.33 Aligned_cols=75 Identities=16% Similarity=0.126 Sum_probs=52.6
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccC---CCCc--------------EEEEEecCCccH---HHHHHHHHHHh-c-CCC
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEK---IFDE--------------VGIATVSQDPDI---IKVQGELAKSL-G-WAL 58 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~---~~~~--------------~~~~~v~q~~~~---~~v~~~i~~~~-~-~~~ 58 (79)
+++|+||||||||||+++|+|+++|+. .+++ +.++||||++.. .++.+++.... . ...
T Consensus 52 i~~liG~NGsGKSTLlk~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~~i~~v~Q~~~l~~~~tv~e~l~~~~~~~~~~ 131 (263)
T 2olj_A 52 VVVVIGPSGSGKSTFLRCLNLLEDFDEGEIIIDGINLKAKDTNLNKVREEVGMVFQRFNLFPHMTVLNNITLAPMKVRKW 131 (263)
T ss_dssp EEEEECCTTSSHHHHHHHHTTSSCCSEEEEEETTEESSSTTCCHHHHHHHEEEECSSCCCCTTSCHHHHHHHHHHHTSCC
T ss_pred EEEEEcCCCCcHHHHHHHHHcCCCCCCcEEEECCEECCCccccHHHHhCcEEEEeCCCcCCCCCCHHHHHHHHHHHHcCC
Confidence 478999999999999999999998871 1211 248999999743 58889987643 2 122
Q ss_pred ChhhHHHHHHHHHHHHh
Q 044571 59 NEKDEKERADRLRLMFS 75 (79)
Q Consensus 59 ~~~~~~~~~~~l~~~l~ 75 (79)
...+..+++.++++.++
T Consensus 132 ~~~~~~~~~~~~l~~~~ 148 (263)
T 2olj_A 132 PREKAEAKAMELLDKVG 148 (263)
T ss_dssp CHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHCC
Confidence 22333456677777775
No 12
>1oxx_K GLCV, glucose, ABC transporter, ATP binding protein; ABC-ATPase, ATP-binding cassette, ATPase, transport protein; 1.45A {Sulfolobus solfataricus} SCOP: b.40.6.3 c.37.1.12 PDB: 1oxs_C 1oxt_A 1oxu_A* 1oxv_A*
Probab=99.75 E-value=2e-18 Score=96.26 Aligned_cols=75 Identities=20% Similarity=0.247 Sum_probs=54.9
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccC---CCC---------------cEEEEEecCCcc---HHHHHHHHHHHhcCC-C
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEK---IFD---------------EVGIATVSQDPD---IIKVQGELAKSLGWA-L 58 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~---~~~---------------~~~~~~v~q~~~---~~~v~~~i~~~~~~~-~ 58 (79)
+++|+||||||||||+|+|+|+++|+. .++ .+.++||||++. .+++.+|+...+... .
T Consensus 33 ~~~llGpnGsGKSTLLr~iaGl~~p~~G~I~i~g~~i~~~~~~~~~~~~r~ig~v~Q~~~l~~~ltv~eni~~~~~~~~~ 112 (353)
T 1oxx_K 33 RFGILGPSGAGKTTFMRIIAGLDVPSTGELYFDDRLVASNGKLIVPPEDRKIGMVFQTWALYPNLTAFENIAFPLTNMKM 112 (353)
T ss_dssp EEEEECSCHHHHHHHHHHHHTSSCCSEEEEEETTEEEEETTEESSCGGGSCEEEEETTSCCCTTSCHHHHHHGGGTTSSC
T ss_pred EEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECcccccccCChhhCCEEEEeCCCccCCCCCHHHHHHHHHHHcCC
Confidence 478999999999999999999998871 111 135899999974 368999998765432 2
Q ss_pred ChhhHHHHHHHHHHHHh
Q 044571 59 NEKDEKERADRLRLMFS 75 (79)
Q Consensus 59 ~~~~~~~~~~~l~~~l~ 75 (79)
...+..+++.++++.++
T Consensus 113 ~~~~~~~~v~~~l~~~~ 129 (353)
T 1oxx_K 113 SKEEIRKRVEEVAKILD 129 (353)
T ss_dssp CHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHcC
Confidence 33334456778888776
No 13
>2pcj_A ABC transporter, lipoprotein-releasing system ATP-binding protein; structural genomics; 1.70A {Aquifex aeolicus} PDB: 2pcl_A
Probab=99.74 E-value=7.9e-18 Score=89.06 Aligned_cols=75 Identities=19% Similarity=0.170 Sum_probs=52.3
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccC---CCCc----------------EEEEEecCCccH---HHHHHHHHHHhcC-C
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEK---IFDE----------------VGIATVSQDPDI---IKVQGELAKSLGW-A 57 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~---~~~~----------------~~~~~v~q~~~~---~~v~~~i~~~~~~-~ 57 (79)
+++|+||||||||||+++|+|+++|+. .+++ ..++|+||++.. .++.+++...... .
T Consensus 32 ~~~iiG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~ 111 (224)
T 2pcj_A 32 FVSIIGASGSGKSTLLYILGLLDAPTEGKVFLEGKEVDYTNEKELSLLRNRKLGFVFQFHYLIPELTALENVIVPMLKMG 111 (224)
T ss_dssp EEEEEECTTSCHHHHHHHHTTSSCCSEEEEEETTEECCSSCHHHHHHHHHHHEEEECSSCCCCTTSCHHHHHHHHHHHTT
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHHHHhCcEEEEecCcccCCCCCHHHHHHhHHHHcC
Confidence 478999999999999999999998871 1111 348999999743 5788888764421 2
Q ss_pred CChhhHHHHHHHHHHHHh
Q 044571 58 LNEKDEKERADRLRLMFS 75 (79)
Q Consensus 58 ~~~~~~~~~~~~l~~~l~ 75 (79)
.......+++.++++.++
T Consensus 112 ~~~~~~~~~~~~~l~~~~ 129 (224)
T 2pcj_A 112 KPKKEAKERGEYLLSELG 129 (224)
T ss_dssp CCHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHHcC
Confidence 222233446677777765
No 14
>3d31_A Sulfate/molybdate ABC transporter, ATP-binding protein; ATP-binding, nucleotide-binding, membrane, transmembrane, transport protein; 3.00A {Methanosarcina acetivorans} SCOP: b.40.6.3 c.37.1.12
Probab=99.74 E-value=1.5e-18 Score=96.64 Aligned_cols=72 Identities=17% Similarity=0.179 Sum_probs=52.0
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccC---CCCc----------EEEEEecCCcc---HHHHHHHHHHHhcC-CCChhhH
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEK---IFDE----------VGIATVSQDPD---IIKVQGELAKSLGW-ALNEKDE 63 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~---~~~~----------~~~~~v~q~~~---~~~v~~~i~~~~~~-~~~~~~~ 63 (79)
+++|+||||||||||+|+|+|+++|+. .+++ +.++||||++. .+++.+|+...+.. .... .
T Consensus 28 ~~~llGpnGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~v~Q~~~l~~~ltv~enl~~~~~~~~~~~-~- 105 (348)
T 3d31_A 28 YFVILGPTGAGKTLFLELIAGFHVPDSGRILLDGKDVTDLSPEKHDIAFVYQNYSLFPHMNVKKNLEFGMRMKKIKD-P- 105 (348)
T ss_dssp EEEEECCCTHHHHHHHHHHHTSSCCSEEEEEETTEECTTSCHHHHTCEEECTTCCCCTTSCHHHHHHHHHHHHCCCC-H-
T ss_pred EEEEECCCCccHHHHHHHHHcCCCCCCcEEEECCEECCCCchhhCcEEEEecCcccCCCCCHHHHHHHHHHHcCCCH-H-
Confidence 478999999999999999999999872 2222 24899999974 36899998775532 1111 1
Q ss_pred HHHHHHHHHHHh
Q 044571 64 KERADRLRLMFS 75 (79)
Q Consensus 64 ~~~~~~l~~~l~ 75 (79)
+++.++++.++
T Consensus 106 -~~v~~~l~~~~ 116 (348)
T 3d31_A 106 -KRVLDTARDLK 116 (348)
T ss_dssp -HHHHHHHHHTT
T ss_pred -HHHHHHHHHcC
Confidence 55667777765
No 15
>1g6h_A High-affinity branched-chain amino acid transport ATP-binding protein; beta-core domain; HET: ADP; 1.60A {Methanocaldococcus jannaschii} SCOP: c.37.1.12 PDB: 1gaj_A 1g9x_A*
Probab=99.74 E-value=9.6e-18 Score=90.23 Aligned_cols=75 Identities=23% Similarity=0.297 Sum_probs=52.2
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccC---CCCc-------------EEEEEecCCccH---HHHHHHHHHHhcC---C-
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEK---IFDE-------------VGIATVSQDPDI---IKVQGELAKSLGW---A- 57 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~---~~~~-------------~~~~~v~q~~~~---~~v~~~i~~~~~~---~- 57 (79)
+++|+||||||||||+|+|+|+++|+. .+++ ..++|+||++.. .++.+++...... .
T Consensus 35 ~~~liG~nGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~ 114 (257)
T 1g6h_A 35 VTLIIGPNGSGKSTLINVITGFLKADEGRVYFENKDITNKEPAELYHYGIVRTFQTPQPLKEMTVLENLLIGEICPGESP 114 (257)
T ss_dssp EEEEECSTTSSHHHHHHHHTTSSCCSEEEEEETTEECTTCCHHHHHHHTEEECCCCCGGGGGSBHHHHHHGGGTSTTSCH
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhCCEEEEccCCccCCCCcHHHHHHHHHhhhccCc
Confidence 478999999999999999999998871 1211 248999999744 5788888765432 1
Q ss_pred ----------CChhhHHHHHHHHHHHHh
Q 044571 58 ----------LNEKDEKERADRLRLMFS 75 (79)
Q Consensus 58 ----------~~~~~~~~~~~~l~~~l~ 75 (79)
.......+++.++++.++
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 142 (257)
T 1g6h_A 115 LNSLFYKKWIPKEEEMVEKAFKILEFLK 142 (257)
T ss_dssp HHHHHHCSSCCCCHHHHHHHHHHHHHTT
T ss_pred ccccccccccCCHHHHHHHHHHHHHHcC
Confidence 112223346677777765
No 16
>1ji0_A ABC transporter; ATP binding protein, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: ATP; 2.00A {Thermotoga maritima} SCOP: c.37.1.12
Probab=99.73 E-value=6.5e-18 Score=90.13 Aligned_cols=74 Identities=26% Similarity=0.336 Sum_probs=49.3
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccC---CCCc-------------EEEEEecCCccH---HHHHHHHHHHhcCCCChh
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEK---IFDE-------------VGIATVSQDPDI---IKVQGELAKSLGWALNEK 61 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~---~~~~-------------~~~~~v~q~~~~---~~v~~~i~~~~~~~~~~~ 61 (79)
+++|+||||||||||+++|+|+++|+. .+++ ..++|+||++.. .++.+++...........
T Consensus 34 ~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~l~~~ltv~enl~~~~~~~~~~~ 113 (240)
T 1ji0_A 34 IVTLIGANGAGKTTTLSAIAGLVRAQKGKIIFNGQDITNKPAHVINRMGIALVPEGRRIFPELTVYENLMMGAYNRKDKE 113 (240)
T ss_dssp EEEEECSTTSSHHHHHHHHTTSSCCSEEEEEETTEECTTCCHHHHHHTTEEEECSSCCCCTTSBHHHHHHGGGTTCCCSS
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCCHHHHHhCCEEEEecCCccCCCCcHHHHHHHhhhcCCCHH
Confidence 478999999999999999999998871 1221 138999999743 588888875432111222
Q ss_pred hHHHHHHHHHHHH
Q 044571 62 DEKERADRLRLMF 74 (79)
Q Consensus 62 ~~~~~~~~l~~~l 74 (79)
...+.+.++++.+
T Consensus 114 ~~~~~~~~~l~~~ 126 (240)
T 1ji0_A 114 GIKRDLEWIFSLF 126 (240)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHc
Confidence 2233455555544
No 17
>1b0u_A Histidine permease; ABC transporter, transport protein; HET: ATP; 1.50A {Salmonella typhimurium} SCOP: c.37.1.12
Probab=99.73 E-value=1.1e-17 Score=90.31 Aligned_cols=75 Identities=19% Similarity=0.239 Sum_probs=52.0
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccC---CCCc-------------------------EEEEEecCCccH---HHHHHH
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEK---IFDE-------------------------VGIATVSQDPDI---IKVQGE 49 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~---~~~~-------------------------~~~~~v~q~~~~---~~v~~~ 49 (79)
+++|+||||||||||+++|+|+++|+. .+++ +.++|+||++.. .++.++
T Consensus 34 ~~~liG~nGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~Q~~~l~~~ltv~e~ 113 (262)
T 1b0u_A 34 VISIIGSSGSGKSTFLRCINFLEKPSEGAIIVNGQNINLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLEN 113 (262)
T ss_dssp EEEEECCTTSSHHHHHHHHTTSSCCSEEEEEETTEECCEEECTTSSEEESCHHHHHHHHHHEEEECSSCCCCTTSCHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEccccccccccccccChhhHHHHhcceEEEecCcccCCCCcHHHH
Confidence 478999999999999999999998871 1111 248999999743 588899
Q ss_pred HHHHh-cC-CCChhhHHHHHHHHHHHHh
Q 044571 50 LAKSL-GW-ALNEKDEKERADRLRLMFS 75 (79)
Q Consensus 50 i~~~~-~~-~~~~~~~~~~~~~l~~~l~ 75 (79)
+.... .. .....+..+++.++++.++
T Consensus 114 l~~~~~~~~~~~~~~~~~~~~~~l~~~~ 141 (262)
T 1b0u_A 114 VMEAPIQVLGLSKHDARERALKYLAKVG 141 (262)
T ss_dssp HHHHHHHTTCCCHHHHHHHHHHHHHHTT
T ss_pred HHhhHHHhcCCCHHHHHHHHHHHHHHcC
Confidence 87642 21 2222233446667777665
No 18
>1vpl_A ABC transporter, ATP-binding protein; TM0544, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.10A {Thermotoga maritima} SCOP: c.37.1.12
Probab=99.73 E-value=8.6e-18 Score=90.41 Aligned_cols=75 Identities=17% Similarity=0.191 Sum_probs=51.8
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccC---CCCc-----------EEEEEecCCccH---HHHHHHHHHHhcC-CCChhh
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEK---IFDE-----------VGIATVSQDPDI---IKVQGELAKSLGW-ALNEKD 62 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~---~~~~-----------~~~~~v~q~~~~---~~v~~~i~~~~~~-~~~~~~ 62 (79)
+++|+||||||||||+++|+|+++|+. .+++ +.++|+||++.. .++.+++...... .....+
T Consensus 43 i~~l~G~NGsGKSTLlk~l~Gl~~p~~G~I~~~g~~~~~~~~~~~~~i~~v~q~~~l~~~ltv~enl~~~~~~~~~~~~~ 122 (256)
T 1vpl_A 43 IFGLIGPNGAGKTTTLRIISTLIKPSSGIVTVFGKNVVEEPHEVRKLISYLPEEAGAYRNMQGIEYLRFVAGFYASSSSE 122 (256)
T ss_dssp EEEEECCTTSSHHHHHHHHTTSSCCSEEEEEETTEETTTCHHHHHTTEEEECTTCCCCTTSBHHHHHHHHHHHHCCCHHH
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCccHHHHhhcEEEEcCCCCCCCCCcHHHHHHHHHHHcCCChHH
Confidence 478999999999999999999998872 2222 248999999743 5788888664321 222222
Q ss_pred HHHHHHHHHHHHh
Q 044571 63 EKERADRLRLMFS 75 (79)
Q Consensus 63 ~~~~~~~l~~~l~ 75 (79)
..+++.++++.++
T Consensus 123 ~~~~~~~~l~~~g 135 (256)
T 1vpl_A 123 IEEMVERATEIAG 135 (256)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHCC
Confidence 3345667777765
No 19
>1sgw_A Putative ABC transporter; structural genomics, P protein structure initiative, southeast collaboratory for S genomics, secsg; 1.70A {Pyrococcus furiosus} SCOP: c.37.1.12
Probab=99.73 E-value=4.4e-18 Score=89.54 Aligned_cols=74 Identities=19% Similarity=0.153 Sum_probs=50.7
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccC---CCCc-------EEEEEecCCccH---HHHHHHHHHHhcCCCChhhHHHHH
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEK---IFDE-------VGIATVSQDPDI---IKVQGELAKSLGWALNEKDEKERA 67 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~---~~~~-------~~~~~v~q~~~~---~~v~~~i~~~~~~~~~~~~~~~~~ 67 (79)
+++|+||||||||||+++|+|+++|+. .+++ ..++|++|++.. .++.+++...........+ .+++
T Consensus 37 ~~~iiG~NGsGKSTLlk~l~Gl~~p~~G~I~~~g~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~-~~~~ 115 (214)
T 1sgw_A 37 VVNFHGPNGIGKTTLLKTISTYLKPLKGEIIYNGVPITKVKGKIFFLPEEIIVPRKISVEDYLKAVASLYGVKVN-KNEI 115 (214)
T ss_dssp CEEEECCTTSSHHHHHHHHTTSSCCSEEEEEETTEEGGGGGGGEEEECSSCCCCTTSBHHHHHHHHHHHTTCCCC-HHHH
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEhhhhcCcEEEEeCCCcCCCCCCHHHHHHHHHHhcCCchH-HHHH
Confidence 579999999999999999999998872 2333 248999999743 5788888654321110112 3455
Q ss_pred HHHHHHHh
Q 044571 68 DRLRLMFS 75 (79)
Q Consensus 68 ~~l~~~l~ 75 (79)
.++++.++
T Consensus 116 ~~~l~~~g 123 (214)
T 1sgw_A 116 MDALESVE 123 (214)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHcC
Confidence 66666665
No 20
>2onk_A Molybdate/tungstate ABC transporter, ATP-binding protein; membrane protein; 3.10A {Archaeoglobus fulgidus} SCOP: c.37.1.12
Probab=99.73 E-value=2.4e-18 Score=91.84 Aligned_cols=74 Identities=18% Similarity=0.284 Sum_probs=50.6
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccC---CCCc----------EEEEEecCCccH---HHHHHHHHHHhcCCCChhhHH
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEK---IFDE----------VGIATVSQDPDI---IKVQGELAKSLGWALNEKDEK 64 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~---~~~~----------~~~~~v~q~~~~---~~v~~~i~~~~~~~~~~~~~~ 64 (79)
+++|+||||||||||+++|+|+++|+. .+++ +.++|+||++.. .++.+++....... ......
T Consensus 26 ~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~i~~v~q~~~l~~~ltv~enl~~~~~~~-~~~~~~ 104 (240)
T 2onk_A 26 YCVLLGPTGAGKSVFLELIAGIVKPDRGEVRLNGADITPLPPERRGIGFVPQDYALFPHLSVYRNIAYGLRNV-ERVERD 104 (240)
T ss_dssp EEEEECCTTSSHHHHHHHHHTSSCCSEEEEEETTEECTTSCTTTSCCBCCCSSCCCCTTSCHHHHHHTTCTTS-CHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCchhhCcEEEEcCCCccCCCCcHHHHHHHHHHHc-CCchHH
Confidence 479999999999999999999998871 1221 357899999743 57888886543211 111123
Q ss_pred HHHHHHHHHHh
Q 044571 65 ERADRLRLMFS 75 (79)
Q Consensus 65 ~~~~~l~~~l~ 75 (79)
+++.++++.++
T Consensus 105 ~~~~~~l~~~~ 115 (240)
T 2onk_A 105 RRVREMAEKLG 115 (240)
T ss_dssp HHHHHHHHTTT
T ss_pred HHHHHHHHHcC
Confidence 45666777665
No 21
>4g1u_C Hemin import ATP-binding protein HMUV; membrane transporter, type II ABC importer, HMUT, plasma MEM transport protein-hydrolase complex; 3.01A {Yersinia pestis}
Probab=99.73 E-value=6.5e-18 Score=91.28 Aligned_cols=74 Identities=14% Similarity=0.133 Sum_probs=52.1
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccC---CCCc------------EEEEEecCCccH---HHHHHHHHHHhcCCCChhh
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEK---IFDE------------VGIATVSQDPDI---IKVQGELAKSLGWALNEKD 62 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~---~~~~------------~~~~~v~q~~~~---~~v~~~i~~~~~~~~~~~~ 62 (79)
+++|+||||||||||+++|+|+++|+. .+++ +.+++++|++.. .++.+++....... ....
T Consensus 39 ~~~liG~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~-~~~~ 117 (266)
T 4g1u_C 39 MVAIIGPNGAGKSTLLRLLTGYLSPSHGECHLLGQNLNSWQPKALARTRAVMRQYSELAFPFSVSEVIQMGRAPY-GGSQ 117 (266)
T ss_dssp EEEEECCTTSCHHHHHHHHTSSSCCSSCEEEETTEETTTSCHHHHHHHEEEECSCCCCCSCCBHHHHHHGGGTTS-CSTT
T ss_pred EEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCCHHHHhheEEEEecCCccCCCCCHHHHHHhhhhhc-CcHH
Confidence 479999999999999999999998872 2222 247999998744 57888887654322 2223
Q ss_pred HHHHHHHHHHHHh
Q 044571 63 EKERADRLRLMFS 75 (79)
Q Consensus 63 ~~~~~~~l~~~l~ 75 (79)
..+++.++++.++
T Consensus 118 ~~~~~~~~l~~~~ 130 (266)
T 4g1u_C 118 DRQALQQVMAQTD 130 (266)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcC
Confidence 3445666777665
No 22
>2nq2_C Hypothetical ABC transporter ATP-binding protein HI1470; putative iron chelatin ABC transporter, nucleotide binding domain; 2.40A {Haemophilus influenzae}
Probab=99.72 E-value=6.3e-18 Score=90.81 Aligned_cols=75 Identities=15% Similarity=0.015 Sum_probs=51.8
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccC-CC-CcEEEEEecCCccH---HHHHHHHHHHhcC--C---CChhhHHHHHHHH
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEK-IF-DEVGIATVSQDPDI---IKVQGELAKSLGW--A---LNEKDEKERADRL 70 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~-~~-~~~~~~~v~q~~~~---~~v~~~i~~~~~~--~---~~~~~~~~~~~~l 70 (79)
+++|+||||||||||+++|+|+++|+. .+ ....++|+||++.. .++.+++...... . .......+++.++
T Consensus 33 ~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (253)
T 2nq2_C 33 ILAVLGQNGCGKSTLLDLLLGIHRPIQGKIEVYQSIGFVPQFFSSPFAYSVLDIVLMGRSTHINTFAKPKSHDYQVAMQA 112 (253)
T ss_dssp EEEEECCSSSSHHHHHHHHTTSSCCSEEEEEECSCEEEECSCCCCSSCCBHHHHHHGGGGGGSCTTCCCCHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCCCcEEEEeccEEEEcCCCccCCCCCHHHHHHHhhhhhcccccCCCHHHHHHHHHH
Confidence 478999999999999999999998872 11 12358999998743 4788888764321 1 1122233456677
Q ss_pred HHHHh
Q 044571 71 RLMFS 75 (79)
Q Consensus 71 ~~~l~ 75 (79)
++.++
T Consensus 113 l~~~~ 117 (253)
T 2nq2_C 113 LDYLN 117 (253)
T ss_dssp HHHTT
T ss_pred HHHcC
Confidence 77765
No 23
>2yz2_A Putative ABC transporter ATP-binding protein TM_0; cobalt transport, TM02 hydrolase, inner membrane, membrane, nucleotide-binding; 2.30A {Thermotoga maritima}
Probab=99.70 E-value=2.4e-17 Score=89.10 Aligned_cols=75 Identities=19% Similarity=0.197 Sum_probs=50.5
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccC---CCCc---------EEEEEecCCcc----HHHHHHHHHHHhcCCCChhhHH
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEK---IFDE---------VGIATVSQDPD----IIKVQGELAKSLGWALNEKDEK 64 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~---~~~~---------~~~~~v~q~~~----~~~v~~~i~~~~~~~~~~~~~~ 64 (79)
+++|+||||||||||+++|+|+++|+. .+++ ..++|++|++. ..++.+++..............
T Consensus 35 ~~~liG~nGsGKSTLl~~i~Gl~~p~~G~I~~~g~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~ 114 (266)
T 2yz2_A 35 CLLVAGNTGSGKSTLLQIVAGLIEPTSGDVLYDGERKKGYEIRRNIGIAFQYPEDQFFAERVFDEVAFAVKNFYPDRDPV 114 (266)
T ss_dssp EEEEECSTTSSHHHHHHHHTTSSCCSEEEEEETTEECCHHHHGGGEEEECSSGGGGCCCSSHHHHHHHTTTTTCTTSCSH
T ss_pred EEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEECchHHhhhhEEEEeccchhhcCCCcHHHHHHHHHHhcCCHHHHH
Confidence 478999999999999999999998872 2322 24799999852 2588888876432111222223
Q ss_pred HHHHHHHHHHh
Q 044571 65 ERADRLRLMFS 75 (79)
Q Consensus 65 ~~~~~l~~~l~ 75 (79)
+++.++++.++
T Consensus 115 ~~~~~~l~~~g 125 (266)
T 2yz2_A 115 PLVKKAMEFVG 125 (266)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHcC
Confidence 45566666655
No 24
>2cbz_A Multidrug resistance-associated protein 1; ABC proteins, MRP1/ABCC1, nucleotide-binding domain, ATP- binding, hydrolysis, transport; HET: ATP; 1.5A {Homo sapiens}
Probab=99.67 E-value=2.7e-17 Score=87.65 Aligned_cols=51 Identities=16% Similarity=0.188 Sum_probs=40.8
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccC---CCCcEEEEEecCCccH--HHHHHHHHH
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEK---IFDEVGIATVSQDPDI--IKVQGELAK 52 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~---~~~~~~~~~v~q~~~~--~~v~~~i~~ 52 (79)
+++|+||||||||||+++|+|+++|+. .+++ .++|++|++.. .++.+++..
T Consensus 33 ~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g-~i~~v~Q~~~~~~~tv~enl~~ 88 (237)
T 2cbz_A 33 LVAVVGQVGCGKSSLLSALLAEMDKVEGHVAIKG-SVAYVPQQAWIQNDSLRENILF 88 (237)
T ss_dssp EEEEECSTTSSHHHHHHHHTTCSEEEEEEEEECS-CEEEECSSCCCCSEEHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCCCceEEECC-EEEEEcCCCcCCCcCHHHHhhC
Confidence 478999999999999999999998872 2333 48999999743 477788764
No 25
>2ihy_A ABC transporter, ATP-binding protein; ATPase, ABC cassette, hydrolase; HET: MSE; 1.90A {Staphylococcus aureus}
Probab=99.66 E-value=4.1e-17 Score=88.69 Aligned_cols=75 Identities=20% Similarity=0.087 Sum_probs=49.5
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccC---CCCc--------------EEEEEecCCccH-----HHHHHHHHHHhcC--
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEK---IFDE--------------VGIATVSQDPDI-----IKVQGELAKSLGW-- 56 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~---~~~~--------------~~~~~v~q~~~~-----~~v~~~i~~~~~~-- 56 (79)
+++|+||||||||||+++|+|+++|+. .+++ +.++|++|++.. .++.+++......
T Consensus 49 ~~~liG~NGsGKSTLlk~l~Gl~~p~~G~I~~~g~~~~~~~~~~~~~~~~i~~v~Q~~~~~~~~~ltv~enl~~~~~~~~ 128 (279)
T 2ihy_A 49 KWILYGLNGAGKTTLLNILNAYEPATSGTVNLFGKMPGKVGYSAETVRQHIGFVSHSLLEKFQEGERVIDVVISGAFKSI 128 (279)
T ss_dssp EEEEECCTTSSHHHHHHHHTTSSCCSEEEEEETTBCCC---CCHHHHHTTEEEECHHHHTTSCTTSBHHHHHHTTC----
T ss_pred EEEEECCCCCcHHHHHHHHhCCCCCCCeEEEECCEEcccccCCHHHHcCcEEEEEcCcccccCCCCCHHHHHHhhhhhcc
Confidence 478999999999999999999998871 1111 248999998531 3788888653211
Q ss_pred ---CCChhhHHHHHHHHHHHHh
Q 044571 57 ---ALNEKDEKERADRLRLMFS 75 (79)
Q Consensus 57 ---~~~~~~~~~~~~~l~~~l~ 75 (79)
.....+..+++.++++.++
T Consensus 129 ~~~~~~~~~~~~~~~~~l~~~g 150 (279)
T 2ihy_A 129 GVYQDIDDEIRNEAHQLLKLVG 150 (279)
T ss_dssp -----CCHHHHHHHHHHHHHTT
T ss_pred ccccCCcHHHHHHHHHHHHHcC
Confidence 1112223345667777765
No 26
>2qi9_C Vitamin B12 import ATP-binding protein BTUD; inner membrane, membrane, transmembrane, transport, ATP- binding, hydrolase, nucleotide-binding, periplasm; HET: 1PE; 2.60A {Escherichia coli} PDB: 1l7v_C* 4dbl_C
Probab=99.66 E-value=1.8e-16 Score=85.04 Aligned_cols=71 Identities=18% Similarity=0.062 Sum_probs=48.5
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccC--CCCc------------EEEEEecCCccH---HHHHHHHHHHhcCCCChhhH
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEK--IFDE------------VGIATVSQDPDI---IKVQGELAKSLGWALNEKDE 63 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~--~~~~------------~~~~~v~q~~~~---~~v~~~i~~~~~~~~~~~~~ 63 (79)
+++|+||||||||||+++|+|+++|+. .+++ ..++|++|++.. .++.+++........ .
T Consensus 28 ~~~liG~NGsGKSTLlk~l~Gl~~p~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~---~- 103 (249)
T 2qi9_C 28 ILHLVGPNGAGKSTLLARMAGMTSGKGSIQFAGQPLEAWSATKLALHRAYLSQQQTPPFATPVWHYLTLHQHDKT---R- 103 (249)
T ss_dssp EEEEECCTTSSHHHHHHHHTTSSCCEEEEEETTEEGGGSCHHHHHHHEEEECSCCCCCTTCBHHHHHHTTCSSTT---C-
T ss_pred EEEEECCCCCcHHHHHHHHhCCCCCCeEEEECCEECCcCCHHHHhceEEEECCCCccCCCCcHHHHHHHhhccCC---c-
Confidence 478999999999999999999998751 1222 248999999743 478888864321111 1
Q ss_pred HHHHHHHHHHHh
Q 044571 64 KERADRLRLMFS 75 (79)
Q Consensus 64 ~~~~~~l~~~l~ 75 (79)
.+.+.++++.++
T Consensus 104 ~~~~~~~l~~~~ 115 (249)
T 2qi9_C 104 TELLNDVAGALA 115 (249)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHcC
Confidence 345566666665
No 27
>2pze_A Cystic fibrosis transmembrane conductance regulat; NBD, ABC transporter, CFTR, hydrolase; HET: ATP; 1.70A {Homo sapiens} PDB: 2pzg_A* 2pzf_A* 1ckx_A 1cky_A 1ckw_A 1ckz_A
Probab=99.65 E-value=6.5e-17 Score=85.80 Aligned_cols=51 Identities=20% Similarity=0.171 Sum_probs=40.4
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccC---CCCcEEEEEecCCccH--HHHHHHHHH
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEK---IFDEVGIATVSQDPDI--IKVQGELAK 52 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~---~~~~~~~~~v~q~~~~--~~v~~~i~~ 52 (79)
+++|+||||||||||+++|+|+++|+. .+++ .++|++|++.. .++.+++..
T Consensus 36 ~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g-~i~~v~q~~~~~~~tv~enl~~ 91 (229)
T 2pze_A 36 LLAVAGSTGAGKTSLLMMIMGELEPSEGKIKHSG-RISFCSQFSWIMPGTIKENIIF 91 (229)
T ss_dssp EEEEECCTTSSHHHHHHHHTTSSCCSEEEEEECS-CEEEECSSCCCCSBCHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHhCCCcCCccEEEECC-EEEEEecCCcccCCCHHHHhhc
Confidence 478999999999999999999998872 2333 48999999743 377777754
No 28
>2ff7_A Alpha-hemolysin translocation ATP-binding protein HLYB; ABC-transporter, transport protein; HET: ADP; 1.60A {Escherichia coli} SCOP: c.37.1.12 PDB: 2ffb_A* 2fgk_A* 2ffa_A* 2fgj_A* 2pmk_A* 3b5j_A* 1mt0_A 1xef_A*
Probab=99.64 E-value=3.1e-16 Score=84.01 Aligned_cols=52 Identities=23% Similarity=0.329 Sum_probs=39.8
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccC---CCCc------------EEEEEecCCccH--HHHHHHHHH
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEK---IFDE------------VGIATVSQDPDI--IKVQGELAK 52 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~---~~~~------------~~~~~v~q~~~~--~~v~~~i~~ 52 (79)
+++|+||||||||||+++|+|+++|+. .+++ ..++|+||++.. .++.+++..
T Consensus 37 ~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~I~i~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~enl~~ 105 (247)
T 2ff7_A 37 VIGIVGRSGSGKSTLTKLIQRFYIPENGQVLIDGHDLALADPNWLRRQVGVVLQDNVLLNRSIIDNISL 105 (247)
T ss_dssp EEEEECSTTSSHHHHHHHHTTSSCCSEEEEEETTEETTTSCHHHHHHHEEEECSSCCCTTSBHHHHHTT
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEhhhCCHHHHHhcEEEEeCCCccccccHHHHHhc
Confidence 478999999999999999999998871 2221 248999999754 366777643
No 29
>1mv5_A LMRA, multidrug resistance ABC transporter ATP-binding and permease protein; asymmetric dimer, tetramer, P-glycoprotein; HET: ATP ADP; 3.10A {Lactococcus lactis} SCOP: c.37.1.12
Probab=99.63 E-value=1.1e-16 Score=85.55 Aligned_cols=51 Identities=25% Similarity=0.291 Sum_probs=39.0
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccC---CCCc------------EEEEEecCCccH--HHHHHHHH
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEK---IFDE------------VGIATVSQDPDI--IKVQGELA 51 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~---~~~~------------~~~~~v~q~~~~--~~v~~~i~ 51 (79)
+++|+||||||||||+++|+|+++|+. .+++ ..++|++|++.. .++.+++.
T Consensus 30 ~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~l~~~tv~enl~ 97 (243)
T 1mv5_A 30 IIAFAGPSGGGKSTIFSLLERFYQPTAGEITIDGQPIDNISLENWRSQIGFVSQDSAIMAGTIRENLT 97 (243)
T ss_dssp EEEEECCTTSSHHHHHHHHTTSSCCSBSCEEETTEESTTTSCSCCTTTCCEECCSSCCCCEEHHHHTT
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEhhhCCHHHHHhhEEEEcCCCccccccHHHHHh
Confidence 478999999999999999999998862 1221 247899999744 36667764
No 30
>2d2e_A SUFC protein; ABC-ATPase, SUF protein, 310-helix, riken structural genomics/proteomics initiative, RSGI, structural genomics, binding; 1.70A {Thermus thermophilus} PDB: 2d2f_A*
Probab=99.63 E-value=8.1e-16 Score=82.49 Aligned_cols=75 Identities=17% Similarity=0.258 Sum_probs=47.1
Q ss_pred CeeEEcCCCCcHHHHHHHHHhh--hcccC---CCCc-------------EEEEEecCCccH---HHHHHHHHHHhc--CC
Q 044571 1 MEGLYGISCVGKTTLANFVGNQ--LRQEK---IFDE-------------VGIATVSQDPDI---IKVQGELAKSLG--WA 57 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~--~~~~~---~~~~-------------~~~~~v~q~~~~---~~v~~~i~~~~~--~~ 57 (79)
+++|+||||||||||+++|+|+ ++|+. .+++ ..+++++|++.. .++.+++..... ..
T Consensus 31 ~~~l~G~nGsGKSTLlk~l~Gl~~~~p~~G~I~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~ 110 (250)
T 2d2e_A 31 VHALMGPNGAGKSTLGKILAGDPEYTVERGEILLDGENILELSPDERARKGLFLAFQYPVEVPGVTIANFLRLALQAKLG 110 (250)
T ss_dssp EEEEECSTTSSHHHHHHHHHTCTTCEEEEEEEEETTEECTTSCHHHHHHTTBCCCCCCCC-CCSCBHHHHHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCCCCceEEEECCEECCCCCHHHHHhCcEEEeccCCccccCCCHHHHHHHHHHhhcc
Confidence 4789999999999999999998 56651 2222 126789999754 467777764321 11
Q ss_pred --CChhhHHHHHHHHHHHHh
Q 044571 58 --LNEKDEKERADRLRLMFS 75 (79)
Q Consensus 58 --~~~~~~~~~~~~l~~~l~ 75 (79)
....+..+++.++++.++
T Consensus 111 ~~~~~~~~~~~~~~~l~~~g 130 (250)
T 2d2e_A 111 REVGVAEFWTKVKKALELLD 130 (250)
T ss_dssp SCCCHHHHHHHHHHHHHHHT
T ss_pred ccCCHHHHHHHHHHHHHHcC
Confidence 111222345566666654
No 31
>2ixe_A Antigen peptide transporter 1; ABC ATPase, hydrolase; HET: ATP; 2.0A {Rattus norvegicus} PDB: 2ixg_A* 2ixf_A* 1jj7_A*
Probab=99.62 E-value=3e-16 Score=85.03 Aligned_cols=53 Identities=25% Similarity=0.391 Sum_probs=41.1
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccC---CCCc------------EEEEEecCCccH--HHHHHHHHHH
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEK---IFDE------------VGIATVSQDPDI--IKVQGELAKS 53 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~---~~~~------------~~~~~v~q~~~~--~~v~~~i~~~ 53 (79)
+++|+||||||||||+++|+|+++|+. .+++ ..++||+|++.+ .++.+++...
T Consensus 47 ~~~i~G~nGsGKSTLlk~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i~~v~Q~~~l~~~tv~enl~~~ 116 (271)
T 2ixe_A 47 VTALVGPNGSGKSTVAALLQNLYQPTGGKVLLDGEPLVQYDHHYLHTQVAAVGQEPLLFGRSFRENIAYG 116 (271)
T ss_dssp EEEEECSTTSSHHHHHHHHTTSSCCSEEEEEETTEEGGGBCHHHHHHHEEEECSSCCCCSSBHHHHHHTT
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCCCCEEEECCEEcccCCHHHHhccEEEEecCCccccccHHHHHhhh
Confidence 478999999999999999999998872 2222 248999999743 3788887653
No 32
>2bbs_A Cystic fibrosis transmembrane conductance regulator; ATP binding cassette, transport protein; HET: ATP; 2.05A {Homo sapiens} PDB: 2bbt_A* 1xmi_A* 1xmj_A* 2bbo_A* 3si7_A* 1r0w_A 1q3h_A 1r0x_A* 1r0y_A* 1r0z_A* 1r10_A* 1xf9_A* 1xfa_A*
Probab=99.62 E-value=1.9e-16 Score=86.46 Aligned_cols=50 Identities=20% Similarity=0.240 Sum_probs=40.5
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccC---CCCcEEEEEecCCccH--HHHHHHHH
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEK---IFDEVGIATVSQDPDI--IKVQGELA 51 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~---~~~~~~~~~v~q~~~~--~~v~~~i~ 51 (79)
+++|+||||||||||+++|+|+++|+. .+++ .++|++|++.. .++.+++.
T Consensus 66 ~~~i~G~NGsGKSTLlk~l~Gl~~p~~G~I~~~g-~i~~v~Q~~~l~~~tv~enl~ 120 (290)
T 2bbs_A 66 LLAVAGSTGAGKTSLLMMIMGELEPSEGKIKHSG-RISFCSQNSWIMPGTIKENII 120 (290)
T ss_dssp EEEEEESTTSSHHHHHHHHTTSSCEEEEEEECCS-CEEEECSSCCCCSSBHHHHHH
T ss_pred EEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECC-EEEEEeCCCccCcccHHHHhh
Confidence 478999999999999999999998872 3443 58999999743 37788876
No 33
>3nh6_A ATP-binding cassette SUB-family B member 6, mitoc; ABC-transporter, ABCB6, nucleotide binding domain, heme BIOS transport protein; 2.00A {Homo sapiens} PDB: 3nh9_A* 3nha_A* 3nhb_A*
Probab=99.62 E-value=1.3e-16 Score=87.67 Aligned_cols=53 Identities=21% Similarity=0.196 Sum_probs=41.8
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccC---CCCc------------EEEEEecCCccH--HHHHHHHHHH
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEK---IFDE------------VGIATVSQDPDI--IKVQGELAKS 53 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~---~~~~------------~~~~~v~q~~~~--~~v~~~i~~~ 53 (79)
+++|+||||||||||+++|.|+++|+. .+++ ..++||||++.+ .++.+|+...
T Consensus 82 ~vaivG~sGsGKSTLl~ll~gl~~p~~G~I~i~G~~i~~~~~~~~r~~i~~v~Q~~~lf~~Tv~eNi~~~ 151 (306)
T 3nh6_A 82 TLALVGPSGAGKSTILRLLFRFYDISSGCIRIDGQDISQVTQASLRSHIGVVPQDTVLFNDTIADNIRYG 151 (306)
T ss_dssp EEEEESSSCHHHHHHHHHHTTSSCCSEEEEEETTEETTSBCHHHHHHTEEEECSSCCCCSEEHHHHHHTT
T ss_pred EEEEECCCCchHHHHHHHHHcCCCCCCcEEEECCEEcccCCHHHHhcceEEEecCCccCcccHHHHHHhh
Confidence 479999999999999999999998872 2332 258999999855 3788887643
No 34
>2pjz_A Hypothetical protein ST1066; ATP binding protein, structural genomics, NPPSFA; 1.90A {Sulfolobus tokodaii}
Probab=99.60 E-value=6.1e-16 Score=83.52 Aligned_cols=52 Identities=17% Similarity=0.194 Sum_probs=39.7
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccC---CCCc---------EEEE-EecCCccH-HHHHHHHHHH
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEK---IFDE---------VGIA-TVSQDPDI-IKVQGELAKS 53 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~---~~~~---------~~~~-~v~q~~~~-~~v~~~i~~~ 53 (79)
+++|+||||||||||+++|+|++ |+. .+++ +.++ |++|++.. .++.+++...
T Consensus 32 ~~~i~G~NGsGKSTLlk~l~Gl~-p~~G~I~~~g~~~~~~~~~~~i~~~v~Q~~~l~~tv~enl~~~ 97 (263)
T 2pjz_A 32 KVIILGPNGSGKTTLLRAISGLL-PYSGNIFINGMEVRKIRNYIRYSTNLPEAYEIGVTVNDIVYLY 97 (263)
T ss_dssp EEEEECCTTSSHHHHHHHHTTSS-CCEEEEEETTEEGGGCSCCTTEEECCGGGSCTTSBHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhCCC-CCCcEEEECCEECcchHHhhheEEEeCCCCccCCcHHHHHHHh
Confidence 47899999999999999999999 862 2222 2478 99998754 4677777653
No 35
>2zu0_C Probable ATP-dependent transporter SUFC; iron-sulfur cluster, ABC-ATPase, ATP-binding, cytoplasm, nucleotide-binding; HET: MES; 2.20A {Escherichia coli} PDB: 2d3w_A
Probab=99.60 E-value=4.4e-15 Score=80.31 Aligned_cols=52 Identities=23% Similarity=0.190 Sum_probs=37.0
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhh--ccc---CCCCc-------------EEEEEecCCccH---HHHHHHHHH
Q 044571 1 MEGLYGISCVGKTTLANFVGNQL--RQE---KIFDE-------------VGIATVSQDPDI---IKVQGELAK 52 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~--~~~---~~~~~-------------~~~~~v~q~~~~---~~v~~~i~~ 52 (79)
+++|+||||||||||+++|+|++ +|+ ..+++ ..++|++|++.. .++.+++..
T Consensus 48 ~~~l~G~NGsGKSTLlk~l~Gl~~~~p~~G~I~~~g~~i~~~~~~~~~~~~i~~v~Q~~~l~~~~tv~e~~~~ 120 (267)
T 2zu0_C 48 VHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLLALSPEDRAGEGIFMAFQYPVEIPGVSNQFFLQT 120 (267)
T ss_dssp EEEEECCTTSSHHHHHHHHHTCTTCEEEEEEEEETTEEGGGSCHHHHHHHTEEEECSSCCCCTTCBHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCcCCHHHHhhCCEEEEccCccccccccHHHHHHH
Confidence 47899999999999999999984 454 12222 137899999743 355666543
No 36
>3gd7_A Fusion complex of cystic fibrosis transmembrane conductance regulator, residues 1193-1427...; CFTR, ABC transporter, nucleotide binding domain, NBD; HET: B44; 2.70A {Homo sapiens}
Probab=99.58 E-value=7.8e-16 Score=86.83 Aligned_cols=51 Identities=25% Similarity=0.227 Sum_probs=38.6
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccC--CCCc------------EEEEEecCCccH--HHHHHHHH
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEK--IFDE------------VGIATVSQDPDI--IKVQGELA 51 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~--~~~~------------~~~~~v~q~~~~--~~v~~~i~ 51 (79)
+++|+||||||||||+++|+|+++... .+++ +.++||||++.+ .++.+|+.
T Consensus 49 ~~~llGpsGsGKSTLLr~iaGl~~~~G~I~i~G~~i~~~~~~~~rr~ig~v~Q~~~lf~~tv~enl~ 115 (390)
T 3gd7_A 49 RVGLLGRTGSGKSTLLSAFLRLLNTEGEIQIDGVSWDSITLEQWRKAFGVIPQKVFIFSGTFRKNLD 115 (390)
T ss_dssp EEEEEESTTSSHHHHHHHHHTCSEEEEEEEESSCBTTSSCHHHHHHTEEEESCCCCCCSEEHHHHHC
T ss_pred EEEEECCCCChHHHHHHHHhCCCCCCeEEEECCEECCcCChHHHhCCEEEEcCCcccCccCHHHHhh
Confidence 478999999999999999999987321 1221 358999999854 46777763
No 37
>2ghi_A Transport protein; multidrug resistance protein, MDR, structural genomics, structural genomics consortium, SGC; 2.20A {Plasmodium yoelii yoelii str}
Probab=99.58 E-value=1.2e-15 Score=82.21 Aligned_cols=52 Identities=21% Similarity=0.177 Sum_probs=39.7
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccC--CCCc------------EEEEEecCCccH--HHHHHHHHH
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEK--IFDE------------VGIATVSQDPDI--IKVQGELAK 52 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~--~~~~------------~~~~~v~q~~~~--~~v~~~i~~ 52 (79)
+++|+||||||||||+++|+|++++.. .+++ ..++|++|++.. .++.+++..
T Consensus 48 ~~~i~G~nGsGKSTLl~~l~Gl~~~~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~l~~~tv~enl~~ 115 (260)
T 2ghi_A 48 TCALVGHTGSGKSTIAKLLYRFYDAEGDIKIGGKNVNKYNRNSIRSIIGIVPQDTILFNETIKYNILY 115 (260)
T ss_dssp EEEEECSTTSSHHHHHHHHTTSSCCEEEEEETTEEGGGBCHHHHHTTEEEECSSCCCCSEEHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHhccCCCCeEEEECCEEhhhcCHHHHhccEEEEcCCCcccccCHHHHHhc
Confidence 478999999999999999999987641 2222 248999999744 377777754
No 38
>3b5x_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; 5.50A {Vibrio cholerae}
Probab=99.56 E-value=4.6e-15 Score=87.08 Aligned_cols=52 Identities=27% Similarity=0.295 Sum_probs=40.7
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccC---CCCc------------EEEEEecCCccH--HHHHHHHHH
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEK---IFDE------------VGIATVSQDPDI--IKVQGELAK 52 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~---~~~~------------~~~~~v~q~~~~--~~v~~~i~~ 52 (79)
+++|+||||||||||+++|.|+++|+. .+++ ..+++|+|++.. .++.+|+..
T Consensus 371 ~~~ivG~sGsGKSTll~~l~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~ 439 (582)
T 3b5x_A 371 TVALVGRSGSGKSTIANLFTRFYDVDSGSICLDGHDVRDYKLTNLRRHFALVSQNVHLFNDTIANNIAY 439 (582)
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCCCCEEEECCEEhhhCCHHHHhcCeEEEcCCCccccccHHHHHhc
Confidence 478999999999999999999999872 2222 258999999854 367777754
No 39
>3aez_A Pantothenate kinase; transferase, homodimer, COA biosynthesis, nucleotide binding binding, cytoplasm, nucleotide-binding; HET: GDP PAZ; 2.20A {Mycobacterium tuberculosis} PDB: 2ges_A* 2geu_A* 2gev_A* 2zs7_A* 2zs8_A* 2zs9_A* 2zsa_A* 2zsb_A* 2zsd_A* 2zse_A* 2zsf_A* 2get_A* 3af0_A* 3af1_A* 3af2_A* 3af3_A* 3af4_A* 3avp_A* 3avo_A* 3avq_A*
Probab=99.55 E-value=8.4e-15 Score=80.70 Aligned_cols=48 Identities=21% Similarity=0.178 Sum_probs=36.7
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccCCCCcEEEEEecCCccH--HHHHHHH
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEKIFDEVGIATVSQDPDI--IKVQGEL 50 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~~~~~~~~~~v~q~~~~--~~v~~~i 50 (79)
++||+|+||||||||+++|.|++++.. ....+++++|+... .++.+++
T Consensus 92 ivgI~G~sGsGKSTL~~~L~gll~~~~--G~~~v~~v~qd~~~~~~t~~e~~ 141 (312)
T 3aez_A 92 IIGVAGSVAVGKSTTARVLQALLARWD--HHPRVDLVTTDGFLYPNAELQRR 141 (312)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHHTST--TCCCEEEEEGGGGBCCHHHHHHT
T ss_pred EEEEECCCCchHHHHHHHHHhhccccC--CCCeEEEEecCccCCcccHHHHH
Confidence 479999999999999999999998752 11457899998643 2555554
No 40
>2yl4_A ATP-binding cassette SUB-family B member 10, mitochondrial; membrane protein, mitochondrial transport; HET: ACP LMT CDL 14Y; 2.85A {Homo sapiens} PDB: 4aa3_A*
Probab=99.52 E-value=4.8e-15 Score=87.16 Aligned_cols=53 Identities=26% Similarity=0.336 Sum_probs=41.5
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccC---CCCc------------EEEEEecCCccH--HHHHHHHHHH
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEK---IFDE------------VGIATVSQDPDI--IKVQGELAKS 53 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~---~~~~------------~~~~~v~q~~~~--~~v~~~i~~~ 53 (79)
+++|+||||||||||+++|.|+++|+. .+++ ..+++|+|++.+ .++.+|+...
T Consensus 372 ~~~ivG~sGsGKSTLl~~l~g~~~p~~G~i~~~g~~i~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~ 441 (595)
T 2yl4_A 372 VTALVGPSGSGKSTVLSLLLRLYDPASGTISLDGHDIRQLNPVWLRSKIGTVSQEPILFSCSIAENIAYG 441 (595)
T ss_dssp EEEEECCTTSSSTHHHHHHTTSSCCSEEEEEETTEETTTBCHHHHHHSEEEECSSCCCCSSBHHHHHHTT
T ss_pred EEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCEEhhhCCHHHHHhceEEEccCCcccCCCHHHHHhhc
Confidence 378999999999999999999998872 2222 258999999854 3788888643
No 41
>3b60_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; HET: ANP; 3.70A {Salmonella typhimurium} SCOP: c.37.1.12 f.37.1.1 PDB: 3b5y_A* 3b5z_A* 3b5w_A
Probab=99.51 E-value=2.4e-14 Score=84.07 Aligned_cols=52 Identities=27% Similarity=0.339 Sum_probs=41.1
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccC---CCCc------------EEEEEecCCccH--HHHHHHHHH
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEK---IFDE------------VGIATVSQDPDI--IKVQGELAK 52 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~---~~~~------------~~~~~v~q~~~~--~~v~~~i~~ 52 (79)
+++|+||||||||||+++|.|+++|+. .+++ ..+++|+|++.. .++.+|+..
T Consensus 371 ~~~ivG~sGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~ 439 (582)
T 3b60_A 371 TVALVGRSGSGKSTIASLITRFYDIDEGHILMDGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAY 439 (582)
T ss_dssp EEEEEECTTSSHHHHHHHHTTTTCCSEEEEEETTEETTTBCHHHHHHTEEEECSSCCCCSSBHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHhhccCCCCCeEEECCEEccccCHHHHHhhCeEEccCCcCCCCCHHHHHhc
Confidence 378999999999999999999998872 2222 248999999854 378888764
No 42
>4a82_A Cystic fibrosis transmembrane conductance regulat; CFTR, ION channel, transport protein, casse protein; 2.00A {Homo sapiens} PDB: 2onj_A* 2hyd_A
Probab=99.48 E-value=6.9e-15 Score=86.29 Aligned_cols=52 Identities=25% Similarity=0.275 Sum_probs=41.0
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccC---CCCc------------EEEEEecCCccH--HHHHHHHHH
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEK---IFDE------------VGIATVSQDPDI--IKVQGELAK 52 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~---~~~~------------~~~~~v~q~~~~--~~v~~~i~~ 52 (79)
+++|+||||||||||+++|.|+++|+. .+++ ..+++|+|++.. .++.+|+..
T Consensus 369 ~~~ivG~sGsGKSTll~~l~g~~~p~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~tv~eni~~ 437 (578)
T 4a82_A 369 TVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILL 437 (578)
T ss_dssp EEEEECSTTSSHHHHHTTTTTSSCCSEEEEEETTEEGGGSCHHHHHHTEEEECSSCCCCSSBHHHHHGG
T ss_pred EEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEEhhhCCHHHHhhheEEEeCCCccCcccHHHHHhc
Confidence 378999999999999999999999872 2332 258999999854 377777754
No 43
>3qf4_B Uncharacterized ABC transporter ATP-binding prote TM_0288; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=99.47 E-value=1.1e-14 Score=85.71 Aligned_cols=52 Identities=27% Similarity=0.319 Sum_probs=41.2
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccC---CCCc------------EEEEEecCCccH--HHHHHHHHH
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEK---IFDE------------VGIATVSQDPDI--IKVQGELAK 52 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~---~~~~------------~~~~~v~q~~~~--~~v~~~i~~ 52 (79)
+++|+||||||||||+++|.|+++|+. .+++ ..+++|+|++.+ .++.+|+..
T Consensus 383 ~~~ivG~sGsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~ 451 (598)
T 3qf4_B 383 KVALVGPTGSGKTTIVNLLMRFYDVDRGQILVDGIDIRKIKRSSLRSSIGIVLQDTILFSTTVKENLKY 451 (598)
T ss_dssp EEEEECCTTSSTTHHHHHHTTSSCCSEEEEEETTEEGGGSCHHHHHHHEEEECTTCCCCSSBHHHHHHS
T ss_pred EEEEECCCCCcHHHHHHHHhcCcCCCCeEEEECCEEhhhCCHHHHHhceEEEeCCCccccccHHHHHhc
Confidence 378999999999999999999999872 2332 258999999854 377788753
No 44
>3j16_B RLI1P; ribosome recycling, translation, eukarya, ribosome; HET: ATP; 7.20A {Saccharomyces cerevisiae}
Probab=99.47 E-value=1.6e-13 Score=81.01 Aligned_cols=51 Identities=20% Similarity=0.214 Sum_probs=39.1
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhcccC--CCCcEEEEEecCCccH---HHHHHHHHH
Q 044571 2 EGLYGISCVGKTTLANFVGNQLRQEK--IFDEVGIATVSQDPDI---IKVQGELAK 52 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~~~~--~~~~~~~~~v~q~~~~---~~v~~~i~~ 52 (79)
++|+||||||||||+++|+|+.+|+. ......+++++|+... .++.+++..
T Consensus 381 v~iiG~NGsGKSTLlk~l~Gl~~p~~G~~~~~~~i~~~~q~~~~~~~~tv~e~~~~ 436 (608)
T 3j16_B 381 LVMMGENGTGKTTLIKLLAGALKPDEGQDIPKLNVSMKPQKIAPKFPGTVRQLFFK 436 (608)
T ss_dssp EEEESCTTSSHHHHHHHHHTSSCCSBCCCCCSCCEEEECSSCCCCCCSBHHHHHHH
T ss_pred EEEECCCCCcHHHHHHHHhcCCCCCCCcCccCCcEEEecccccccCCccHHHHHHH
Confidence 79999999999999999999999873 2334468999998632 355665543
No 45
>1znw_A Guanylate kinase, GMP kinase; ATP:GMP-phosphotransferase, TR; 2.10A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1znx_A* 1zny_A* 1znz_A* 1s4q_A 1z8f_A
Probab=99.47 E-value=1.2e-14 Score=75.89 Aligned_cols=43 Identities=23% Similarity=0.237 Sum_probs=31.0
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhccc-----------CCCCcEEEEEecCCccH
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQE-----------KIFDEVGIATVSQDPDI 43 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~-----------~~~~~~~~~~v~q~~~~ 43 (79)
+++|+||||||||||+++|.|+++.. .......++|+||++..
T Consensus 22 i~~l~GpnGsGKSTLl~~l~gl~~~i~~~~~~~~~~~~~~~~~~i~~~~q~~~~ 75 (207)
T 1znw_A 22 VVVLSGPSAVGKSTVVRCLRERIPNLHFSVSATTRAPRPGEVDGVDYHFIDPTR 75 (207)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHSTTCEECCCEESSCCCTTCCBTTTBEECCHHH
T ss_pred EEEEECCCCCCHHHHHHHHHhhCCceEEcccccccCCcccccCCCeeEecCHHH
Confidence 47899999999999999999998411 00112346788887643
No 46
>1yqt_A RNAse L inhibitor; ATP-binding cassette, ribosome biogenesis, hydrolyase/translation complex; HET: ADP; 1.90A {Pyrococcus furiosus}
Probab=99.46 E-value=5.7e-14 Score=81.99 Aligned_cols=50 Identities=20% Similarity=0.145 Sum_probs=37.9
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccC-C-CCcEEEEEecCCccH---HHHHHHH
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEK-I-FDEVGIATVSQDPDI---IKVQGEL 50 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~-~-~~~~~~~~v~q~~~~---~~v~~~i 50 (79)
+++|+|+||||||||+++|+|+.+|+. . .....++|++|++.. .++.+++
T Consensus 314 ~~~i~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~~~i~~v~Q~~~~~~~~tv~~~~ 368 (538)
T 1yqt_A 314 VIGIVGPNGIGKTTFVKMLAGVEEPTEGKIEWDLTVAYKPQYIKADYEGTVYELL 368 (538)
T ss_dssp EEEEECCTTSSHHHHHHHHHTSSCCSBCCCCCCCCEEEECSSCCCCCSSBHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECceEEEEecCCcCCCCCcHHHHH
Confidence 478999999999999999999998872 1 113468999998732 3554444
No 47
>3sop_A Neuronal-specific septin-3; hydrolase; HET: GDP; 2.88A {Homo sapiens}
Probab=99.46 E-value=7.8e-14 Score=75.57 Aligned_cols=41 Identities=24% Similarity=0.174 Sum_probs=29.1
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhcccC---CC---------CcEEEEEecCCcc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLRQEK---IF---------DEVGIATVSQDPD 42 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~~~~---~~---------~~~~~~~v~q~~~ 42 (79)
++|+||||||||||+++|+|...++. .+ ....+++++|++.
T Consensus 5 v~lvG~nGaGKSTLln~L~g~~~~~~G~i~~~g~~i~~~~~~~~i~~v~q~~~ 57 (270)
T 3sop_A 5 IMVVGQSGLGKSTLVNTLFKSQVSRKASSWNREEKIPKTVEIKAIGHVIEEGG 57 (270)
T ss_dssp EEEEESSSSSHHHHHHHHHHHHC------------CCCCCSCCEEEESCC---
T ss_pred EEEECCCCCCHHHHHHHHhCCCCCCCCccccCCcccCcceeeeeeEEEeecCC
Confidence 78999999999999999999998762 11 1246889999864
No 48
>3ozx_A RNAse L inhibitor; ATP binding cassette protein, hydrolase, translation; HET: ADP; 2.05A {Sulfolobus solfataricus}
Probab=99.45 E-value=4.8e-14 Score=82.28 Aligned_cols=52 Identities=21% Similarity=0.201 Sum_probs=41.4
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccC---CCCcEEEEEecCCcc---HHHHHHHHHH
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEK---IFDEVGIATVSQDPD---IIKVQGELAK 52 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~---~~~~~~~~~v~q~~~---~~~v~~~i~~ 52 (79)
+++|+||||||||||+++|+|+.+|+. .+....+++++|+.. ..++.+++..
T Consensus 296 i~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~~~~i~~~~q~~~~~~~~tv~~~l~~ 353 (538)
T 3ozx_A 296 IIGILGPNGIGKTTFARILVGEITADEGSVTPEKQILSYKPQRIFPNYDGTVQQYLEN 353 (538)
T ss_dssp EEEEECCTTSSHHHHHHHHTTSSCCSBCCEESSCCCEEEECSSCCCCCSSBHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCeeeEeechhcccccCCCHHHHHHH
Confidence 479999999999999999999999873 355667899999863 2466666654
No 49
>3bk7_A ABC transporter ATP-binding protein; ABC ATPase, iron-sulfur cluster, adenosine diphosphate, nucleotide-binding; HET: ADP; 2.80A {Pyrococcus abyssi} PDB: 3j15_B*
Probab=99.45 E-value=6.9e-14 Score=82.57 Aligned_cols=51 Identities=20% Similarity=0.175 Sum_probs=38.6
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccC-CC-CcEEEEEecCCccH---HHHHHHHH
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEK-IF-DEVGIATVSQDPDI---IKVQGELA 51 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~-~~-~~~~~~~v~q~~~~---~~v~~~i~ 51 (79)
+++|+||||||||||+++|+|+++|+. .. ....++|++|++.. .++.+++.
T Consensus 384 i~~i~G~NGsGKSTLlk~l~Gl~~p~~G~I~~~~~i~~v~Q~~~~~~~~tv~e~~~ 439 (607)
T 3bk7_A 384 VIGIVGPNGIGKTTFVKMLAGVEEPTEGKVEWDLTVAYKPQYIKAEYEGTVYELLS 439 (607)
T ss_dssp EEEEECCTTSSHHHHHHHHHTSSCCSBSCCCCCCCEEEECSSCCCCCSSBHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCCceEEEEeeEEEEEecCccCCCCCcHHHHHH
Confidence 478999999999999999999998873 11 13468999998733 35555443
No 50
>3qf4_A ABC transporter, ATP-binding protein; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=99.45 E-value=1.4e-14 Score=85.15 Aligned_cols=51 Identities=25% Similarity=0.375 Sum_probs=40.2
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccC---CCCc------------EEEEEecCCccH--HHHHHHHH
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEK---IFDE------------VGIATVSQDPDI--IKVQGELA 51 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~---~~~~------------~~~~~v~q~~~~--~~v~~~i~ 51 (79)
+++|+||||||||||+++|.|+++|+. .+++ ..+++|+|++.+ .++.+|+.
T Consensus 371 ~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~ 438 (587)
T 3qf4_A 371 LVAVLGETGSGKSTLMNLIPRLIDPERGRVEVDELDVRTVKLKDLRGHISAVPQETVLFSGTIKENLK 438 (587)
T ss_dssp EEEEECSSSSSHHHHHHTTTTSSCCSEEEEEESSSBGGGBCHHHHHHHEEEECSSCCCCSEEHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHhCCccCCCcEEEECCEEcccCCHHHHHhheEEECCCCcCcCccHHHHHh
Confidence 378999999999999999999999872 2221 358999999855 36777774
No 51
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=99.41 E-value=1.9e-13 Score=85.90 Aligned_cols=52 Identities=25% Similarity=0.351 Sum_probs=42.5
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccC---CCCc------------EEEEEecCCccH--HHHHHHHHH
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEK---IFDE------------VGIATVSQDPDI--IKVQGELAK 52 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~---~~~~------------~~~~~v~q~~~~--~~v~~~i~~ 52 (79)
.++|+||||||||||+++|.|+++|.. .+++ ..++||+|++-+ .++.+||..
T Consensus 446 ~vaivG~sGsGKSTll~ll~~~~~~~~G~I~idG~~i~~~~~~~lr~~i~~v~Q~~~Lf~~TI~eNI~~ 514 (1321)
T 4f4c_A 446 TVALVGSSGCGKSTIISLLLRYYDVLKGKITIDGVDVRDINLEFLRKNVAVVSQEPALFNCTIEENISL 514 (1321)
T ss_dssp EEEEEECSSSCHHHHHHHHTTSSCCSEEEEEETTEETTTSCHHHHHHHEEEECSSCCCCSEEHHHHHHT
T ss_pred EEEEEecCCCcHHHHHHHhccccccccCcccCCCccchhccHHHHhhcccccCCcceeeCCchhHHHhh
Confidence 378999999999999999999999872 2333 258999999865 478999864
No 52
>3asz_A Uridine kinase; cytidine phosphorylation, transferase; HET: C5P; 2.25A {Thermus thermophilus} PDB: 3asy_A*
Probab=99.40 E-value=1.4e-13 Score=71.86 Aligned_cols=34 Identities=32% Similarity=0.433 Sum_probs=28.8
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccCCCCcEEEEEecCCc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEKIFDEVGIATVSQDP 41 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~~~~~~~~~~v~q~~ 41 (79)
+++|+|+||||||||+++|.+++.+ .+++++|+.
T Consensus 8 ~i~i~G~~GsGKSTl~~~l~~~~~~-------~i~~v~~d~ 41 (211)
T 3asz_A 8 VIGIAGGTASGKTTLAQALARTLGE-------RVALLPMDH 41 (211)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHGG-------GEEEEEGGG
T ss_pred EEEEECCCCCCHHHHHHHHHHHhCC-------CeEEEecCc
Confidence 4799999999999999999998775 356777775
No 53
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=99.40 E-value=9.4e-14 Score=87.29 Aligned_cols=52 Identities=25% Similarity=0.336 Sum_probs=42.0
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhcccC---CCCc------------EEEEEecCCccHH--HHHHHHHHH
Q 044571 2 EGLYGISCVGKTTLANFVGNQLRQEK---IFDE------------VGIATVSQDPDII--KVQGELAKS 53 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~~~~---~~~~------------~~~~~v~q~~~~~--~v~~~i~~~ 53 (79)
+||+|+||||||||+++|.|+++|+. .+++ ..+++|||+|.+. ++.+||...
T Consensus 1108 vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~iDG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNI~~g 1176 (1321)
T 4f4c_A 1108 LALVGPSGCGKSTVVALLERFYDTLGGEIFIDGSEIKTLNPEHTRSQIAIVSQEPTLFDCSIAENIIYG 1176 (1321)
T ss_dssp EEEECSTTSSTTSHHHHHTTSSCCSSSEEEETTEETTTBCHHHHHTTEEEECSSCCCCSEEHHHHHSSS
T ss_pred EEEECCCCChHHHHHHHHhcCccCCCCEEEECCEEhhhCCHHHHHhheEEECCCCEeeCccHHHHHhcc
Confidence 79999999999999999999999872 2333 2589999998663 788887533
No 54
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=99.40 E-value=1.7e-13 Score=85.96 Aligned_cols=53 Identities=23% Similarity=0.252 Sum_probs=42.5
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccC---CCCcE------------EEEEecCCccH--HHHHHHHHHH
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEK---IFDEV------------GIATVSQDPDI--IKVQGELAKS 53 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~---~~~~~------------~~~~v~q~~~~--~~v~~~i~~~ 53 (79)
+++|+||||||||||+++|.|+++|+. .+++. .+++|+|++.+ .++.+|+...
T Consensus 418 ~~~ivG~sGsGKSTl~~ll~g~~~~~~G~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~g 487 (1284)
T 3g5u_A 418 TVALVGNSGCGKSTTVQLMQRLYDPLDGMVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYG 487 (1284)
T ss_dssp EEEEECCSSSSHHHHHHHTTTSSCCSEEEEEETTEEGGGSCHHHHHHHEEEECSSCCCCSSCHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEHHhCCHHHHHhheEEEcCCCccCCccHHHHHhcC
Confidence 379999999999999999999998872 23332 48999999854 3788888754
No 55
>2v9p_A Replication protein E1; AAA+ molecular motor, DNA replication, DNA translocation, nucleotide-binding, DNA-binding; 3.00A {Bovine papillomavirus type 1} PDB: 2gxa_A*
Probab=99.37 E-value=3.4e-13 Score=74.16 Aligned_cols=37 Identities=16% Similarity=0.164 Sum_probs=31.4
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccCCCCcEEEEEecCCccH
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEKIFDEVGIATVSQDPDI 43 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~~~~~~~~~~v~q~~~~ 43 (79)
+++|+||||||||||+++|.|++ .+..+++++|++.+
T Consensus 128 ~vaIvGpsGsGKSTLl~lL~gl~------~G~I~~~v~q~~~l 164 (305)
T 2v9p_A 128 CLAFIGPPNTGKSMLCNSLIHFL------GGSVLSFANHKSHF 164 (305)
T ss_dssp EEEEECSSSSSHHHHHHHHHHHH------TCEEECGGGTTSGG
T ss_pred EEEEECCCCCcHHHHHHHHhhhc------CceEEEEecCcccc
Confidence 47899999999999999999997 45667788888654
No 56
>3b85_A Phosphate starvation-inducible protein; PHOH2, ATPase, PFAM: PF02562, ST genomics, PSI-2, protein structure initiative; 2.35A {Corynebacterium glutamicum atcc 13032}
Probab=99.36 E-value=1.2e-13 Score=72.43 Aligned_cols=40 Identities=18% Similarity=-0.004 Sum_probs=30.0
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccC-CCC-----------cEEEEEecCCc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEK-IFD-----------EVGIATVSQDP 41 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~-~~~-----------~~~~~~v~q~~ 41 (79)
+++|+||||||||||+++|+|+ +|+. .+. ...++|+||++
T Consensus 24 ~~~liG~nGsGKSTLl~~l~Gl-~p~~G~I~~~~~~~~~~~~~~~ig~v~q~~ 75 (208)
T 3b85_A 24 IVFGLGPAGSGKTYLAMAKAVQ-ALQSKQVSRIILTRPAVEAGEKLGFLPGTL 75 (208)
T ss_dssp EEEEECCTTSSTTHHHHHHHHH-HHHTTSCSEEEEEECSCCTTCCCCSSCC--
T ss_pred EEEEECCCCCCHHHHHHHHhcC-CCcCCeeeeEEecCCchhhhcceEEecCCH
Confidence 4789999999999999999999 7762 111 13478899976
No 57
>1htw_A HI0065; nucleotide-binding fold, structural genomics, structure 2 function project, S2F, unknown function; HET: ADP; 1.70A {Haemophilus influenzae} SCOP: c.37.1.18 PDB: 1fl9_A
Probab=99.36 E-value=4.1e-13 Score=67.82 Aligned_cols=25 Identities=32% Similarity=0.181 Sum_probs=22.8
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhccc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQE 26 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~ 26 (79)
+++|+||||||||||+|+|+|.+ |.
T Consensus 35 ~v~L~G~nGaGKTTLlr~l~g~l-~~ 59 (158)
T 1htw_A 35 MVYLNGDLGAGKTTLTRGMLQGI-GH 59 (158)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHT-TC
T ss_pred EEEEECCCCCCHHHHHHHHHHhC-CC
Confidence 47899999999999999999998 54
No 58
>3c8u_A Fructokinase; YP_612366.1, putative fructose transport system kinase, STRU genomics, joint center for structural genomics, JCSG; 1.95A {Silicibacter SP}
Probab=99.36 E-value=3.2e-13 Score=70.56 Aligned_cols=37 Identities=27% Similarity=0.337 Sum_probs=29.2
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccCCCCcEEEEEecCCc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEKIFDEVGIATVSQDP 41 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~~~~~~~~~~v~q~~ 41 (79)
+++|+||||||||||+++|.+.+++. +...++++++.
T Consensus 24 ~v~I~G~sGsGKSTl~~~l~~~~~~~----g~~~g~v~~d~ 60 (208)
T 3c8u_A 24 LVALSGAPGSGKSTLSNPLAAALSAQ----GLPAEVVPMDG 60 (208)
T ss_dssp EEEEECCTTSCTHHHHHHHHHHHHHT----TCCEEEEESGG
T ss_pred EEEEECCCCCCHHHHHHHHHHHHhhc----CCceEEEecCC
Confidence 47999999999999999999998864 12356666653
No 59
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=99.33 E-value=3.8e-13 Score=84.45 Aligned_cols=51 Identities=24% Similarity=0.346 Sum_probs=39.9
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccC---CCCc------------EEEEEecCCccH--HHHHHHHH
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEK---IFDE------------VGIATVSQDPDI--IKVQGELA 51 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~---~~~~------------~~~~~v~q~~~~--~~v~~~i~ 51 (79)
++||+|+||||||||+++|.|+++|+. .+++ ..+++|||++.+ .++.+|+.
T Consensus 1061 ~v~ivG~sGsGKSTl~~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~ 1128 (1284)
T 3g5u_A 1061 TLALVGSSGCGKSTVVQLLERFYDPMAGSVFLDGKEIKQLNVQWLRAQLGIVSQEPILFDCSIAENIA 1128 (1284)
T ss_dssp EEEEECSSSTTHHHHHHHHTTSSCCSEEEEESSSSCTTSSCHHHHTTSCEEEESSCCCCSSBHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEEcccCCHHHHHhceEEECCCCccccccHHHHHh
Confidence 379999999999999999999998871 2222 358999999854 36777764
No 60
>3a00_A Guanylate kinase, GMP kinase; domain movement, dimerization, acetylation, ATP-binding, nucleotide-binding, phosphoprotein, transferase; 1.80A {Saccharomyces cerevisiae} PDB: 1ex6_A* 1ex7_A 1gky_A* 2zzz_A 3sqk_A 4f4j_A 2zzy_A
Probab=99.33 E-value=9.7e-13 Score=67.72 Aligned_cols=25 Identities=24% Similarity=0.119 Sum_probs=22.9
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQ 25 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~ 25 (79)
+++|+||||||||||+++|.+++++
T Consensus 3 ii~l~GpsGaGKsTl~~~L~~~~~~ 27 (186)
T 3a00_A 3 PIVISGPSGTGKSTLLKKLFAEYPD 27 (186)
T ss_dssp CEEEESSSSSSHHHHHHHHHHHCGG
T ss_pred EEEEECCCCCCHHHHHHHHHhhCCc
Confidence 5799999999999999999999873
No 61
>1ye8_A Protein THEP1, hypothetical UPF0334 kinase-like protein AQ_1292; mixed alpha-beta protein, rossman fold, signaling protein, transferase; 1.40A {Aquifex aeolicus} SCOP: c.37.1.11
Probab=99.32 E-value=1e-12 Score=67.50 Aligned_cols=24 Identities=33% Similarity=0.314 Sum_probs=22.2
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhcc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLRQ 25 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~~ 25 (79)
++|+||||||||||+++|+|++..
T Consensus 3 i~l~G~nGsGKTTLl~~l~g~l~i 26 (178)
T 1ye8_A 3 IIITGEPGVGKTTLVKKIVERLGK 26 (178)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHGG
T ss_pred EEEECCCCCCHHHHHHHHHHHhCC
Confidence 789999999999999999999764
No 62
>3ozx_A RNAse L inhibitor; ATP binding cassette protein, hydrolase, translation; HET: ADP; 2.05A {Sulfolobus solfataricus}
Probab=99.32 E-value=6e-13 Score=77.76 Aligned_cols=26 Identities=27% Similarity=0.483 Sum_probs=24.3
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhccc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQE 26 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~ 26 (79)
++||+||||||||||+|+|+|+++|+
T Consensus 27 i~gLiGpNGaGKSTLlkiL~Gl~~p~ 52 (538)
T 3ozx_A 27 ILGVLGKNGVGKTTVLKILAGEIIPN 52 (538)
T ss_dssp EEEEECCTTSSHHHHHHHHTTSSCCC
T ss_pred EEEEECCCCCcHHHHHHHHhcCCCCC
Confidence 47999999999999999999999886
No 63
>1s96_A Guanylate kinase, GMP kinase; E.coli, dimer, SAD, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.1 PDB: 2an9_A* 2anb_A* 2anc_A 2f3r_A* 2f3t_A*
Probab=99.31 E-value=1e-12 Score=69.38 Aligned_cols=25 Identities=16% Similarity=0.032 Sum_probs=23.0
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQ 25 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~ 25 (79)
+++|+||||||||||+++|.|..+|
T Consensus 18 ii~l~GpsGsGKSTLlk~L~g~~~p 42 (219)
T 1s96_A 18 LYIVSAPSGAGKSSLIQALLKTQPL 42 (219)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHSCT
T ss_pred EEEEECCCCCCHHHHHHHHhccCCC
Confidence 4789999999999999999999875
No 64
>1z6g_A Guanylate kinase; structural genomics, SGC, structural genom consortium, transferase; HET: EPE; 2.18A {Plasmodium falciparum}
Probab=99.30 E-value=1.5e-12 Score=68.60 Aligned_cols=24 Identities=33% Similarity=0.242 Sum_probs=22.1
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
+++|+||||||||||+++|.|+++
T Consensus 25 ~~~lvGpsGsGKSTLl~~L~g~~p 48 (218)
T 1z6g_A 25 PLVICGPSGVGKGTLIKKLLNEFP 48 (218)
T ss_dssp CEEEECSTTSSHHHHHHHHHHHST
T ss_pred EEEEECCCCCCHHHHHHHHHhhCC
Confidence 479999999999999999999883
No 65
>1lvg_A Guanylate kinase, GMP kinase; transferase; HET: ADP 5GP; 2.10A {Mus musculus} SCOP: c.37.1.1
Probab=99.29 E-value=1.9e-12 Score=67.32 Aligned_cols=24 Identities=29% Similarity=0.138 Sum_probs=22.1
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
+++|+||||||||||+++|.++++
T Consensus 6 ~i~lvGpsGaGKSTLl~~L~~~~~ 29 (198)
T 1lvg_A 6 PVVLSGPSGAGKSTLLKKLFQEHS 29 (198)
T ss_dssp CEEEECCTTSSHHHHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHhhCc
Confidence 478999999999999999999875
No 66
>3tr0_A Guanylate kinase, GMP kinase; purines, pyrimidines, nucleosides, nucleotides, transferase; HET: 5GP; 1.85A {Coxiella burnetii}
Probab=99.29 E-value=1.3e-12 Score=67.71 Aligned_cols=24 Identities=25% Similarity=0.167 Sum_probs=21.9
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
+++|+||||||||||+++|.++.+
T Consensus 9 ii~l~Gp~GsGKSTl~~~L~~~~~ 32 (205)
T 3tr0_A 9 LFIISAPSGAGKTSLVRALVKALA 32 (205)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHSS
T ss_pred EEEEECcCCCCHHHHHHHHHhhCC
Confidence 478999999999999999999864
No 67
>1yqt_A RNAse L inhibitor; ATP-binding cassette, ribosome biogenesis, hydrolyase/translation complex; HET: ADP; 1.90A {Pyrococcus furiosus}
Probab=99.29 E-value=1.2e-12 Score=76.48 Aligned_cols=26 Identities=27% Similarity=0.426 Sum_probs=24.1
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhccc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQE 26 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~ 26 (79)
+++|+||||||||||+|+|+|+++|+
T Consensus 49 ~~~LvG~NGaGKSTLlk~l~Gl~~p~ 74 (538)
T 1yqt_A 49 VVGIVGPNGTGKSTAVKILAGQLIPN 74 (538)
T ss_dssp EEEEECCTTSSHHHHHHHHHTSSCCC
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCC
Confidence 47999999999999999999999876
No 68
>3j16_B RLI1P; ribosome recycling, translation, eukarya, ribosome; HET: ATP; 7.20A {Saccharomyces cerevisiae}
Probab=99.28 E-value=1.4e-12 Score=77.07 Aligned_cols=26 Identities=23% Similarity=0.456 Sum_probs=24.4
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhccc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQE 26 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~ 26 (79)
+++|+||||||||||+++|+|+++|+
T Consensus 105 i~~LvGpNGaGKSTLLkiL~Gll~P~ 130 (608)
T 3j16_B 105 VLGLVGTNGIGKSTALKILAGKQKPN 130 (608)
T ss_dssp EEEEECCTTSSHHHHHHHHHTSSCCC
T ss_pred EEEEECCCCChHHHHHHHHhcCCCCC
Confidence 47999999999999999999999887
No 69
>2iw3_A Elongation factor 3A; acetylation, ATP-binding, protein biosynthesis, nucleotide-binding, phosphorylation, RNA- binding, rRNA-binding; HET: ADP; 2.4A {Saccharomyces cerevisiae} PDB: 2iwh_A* 2ix3_A 2ix8_A
Probab=99.28 E-value=4.4e-13 Score=82.35 Aligned_cols=41 Identities=24% Similarity=0.278 Sum_probs=33.1
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccC---CCC-cEEEEEecCCc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEK---IFD-EVGIATVSQDP 41 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~---~~~-~~~~~~v~q~~ 41 (79)
+++|+||||||||||+|+|+|+++|+. .++ ...++|++|++
T Consensus 701 ivaIiGpNGSGKSTLLklLaGll~P~sG~I~~~~~~~I~yv~Q~~ 745 (986)
T 2iw3_A 701 RIAVIGPNGAGKSTLINVLTGELLPTSGEVYTHENCRIAYIKQHA 745 (986)
T ss_dssp EEEECSCCCHHHHHHHHHHTTSSCCSEEEEEECTTCCEEEECHHH
T ss_pred EEEEECCCCCCHHHHHHHHhCCCCCCceEEEEcCccceEeeccch
Confidence 479999999999999999999998872 222 23578999975
No 70
>3szr_A Interferon-induced GTP-binding protein MX1; interferon-induced antiviral GTPase, membrane associated, PR binding; 3.50A {Homo sapiens} PDB: 3zys_B
Probab=99.27 E-value=3.1e-12 Score=75.66 Aligned_cols=52 Identities=13% Similarity=0.106 Sum_probs=33.9
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhcc-cC---CCC---------------cEEEEEecCCc---cHHHHHHHHHHH
Q 044571 2 EGLYGISCVGKTTLANFVGNQLRQ-EK---IFD---------------EVGIATVSQDP---DIIKVQGELAKS 53 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~~-~~---~~~---------------~~~~~~v~q~~---~~~~v~~~i~~~ 53 (79)
++|+|+||||||||+++|.|+..| +. .++ ...+++++|++ +..++.+++...
T Consensus 48 iaIvG~nGsGKSTLL~~I~Gl~~P~~sG~vt~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~l~~~~tv~e~i~~~ 121 (608)
T 3szr_A 48 IAVIGDQSSGKSSVLEALSGVALPRGSGIVTRCPLVLKLKKLVNEDKWRGKVSYQDYEIEISDASEVEKEINKA 121 (608)
T ss_dssp EECCCCTTSCHHHHHHHHHSCC-------CCCSCEEEEEEECSSSSCCEEEESCC---CCCCCHHHHHTTHHHH
T ss_pred EEEECCCCChHHHHHHHHhCCCCCCCCCeEEEcCEEEEEecCCccccceeEEeeecccccCCCHHHHHHHHHHH
Confidence 789999999999999999999867 21 111 23578899986 335677776553
No 71
>2a5y_B CED-4; apoptosis; HET: ATP; 2.60A {Caenorhabditis elegans} SCOP: a.4.5.80 a.77.1.3 c.37.1.20 PDB: 3lqq_A* 3lqr_A*
Probab=99.25 E-value=7.2e-11 Score=69.08 Aligned_cols=75 Identities=11% Similarity=-0.047 Sum_probs=54.1
Q ss_pred CeeEEcCCCCcHHHHHHHHHh--hhcccCCCCcEEEEEecCCc--cHHHHHHHHHHHhcCCC--------ChhhHHHHHH
Q 044571 1 MEGLYGISCVGKTTLANFVGN--QLRQEKIFDEVGIATVSQDP--DIIKVQGELAKSLGWAL--------NEKDEKERAD 68 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g--~~~~~~~~~~~~~~~v~q~~--~~~~v~~~i~~~~~~~~--------~~~~~~~~~~ 68 (79)
+++|+|++|+|||||++.++. .......|+...|+.+.+.+ +...+...++..+.... ...+......
T Consensus 154 vv~I~G~gGvGKTtLA~~v~~~~~~~~~~~F~~~~wv~vs~~~~~~~~~~~~~il~~l~~~~~~~~~~~~~~~~~~~l~~ 233 (549)
T 2a5y_B 154 FLFLHGRAGSGKSVIASQALSKSDQLIGINYDSIVWLKDSGTAPKSTFDLFTDILLMLKSEDDLLNFPSVEHVTSVVLKR 233 (549)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHCSSTBTTTBSEEEEEECCCCSTTHHHHHHHHHHHHHTTTSCCTTCCCCTTCCHHHHHH
T ss_pred EEEEEcCCCCCHHHHHHHHHHhhhHHHhccCCcEEEEEECCCCCCCHHHHHHHHHHHHhcCcccccccccccccHHHHHH
Confidence 478999999999999999997 33444678999999999986 56778888888775321 1112233456
Q ss_pred HHHHHHh
Q 044571 69 RLRLMFS 75 (79)
Q Consensus 69 ~l~~~l~ 75 (79)
.+.+.+.
T Consensus 234 ~l~~~L~ 240 (549)
T 2a5y_B 234 MICNALI 240 (549)
T ss_dssp HHHHHHT
T ss_pred HHHHHHc
Confidence 6666665
No 72
>3euj_A Chromosome partition protein MUKB, linker; MUKB, MUKE, chromosome condensation, condensin, SMC, N subunit, ABC-type ATPase, WHD, ATP-binding; HET: AGS; 3.10A {Haemophilus ducreyi} PDB: 3euk_A*
Probab=99.25 E-value=3.3e-12 Score=73.86 Aligned_cols=26 Identities=23% Similarity=0.144 Sum_probs=24.2
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhccc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQE 26 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~ 26 (79)
+++|+||||||||||+++|+|+++|+
T Consensus 31 ~~~liG~nGsGKSTLl~~l~Gl~~p~ 56 (483)
T 3euj_A 31 VTTLSGGNGAGKSTTMAGFVTALIPD 56 (483)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHCCC
T ss_pred eEEEECCCCCcHHHHHHHHhcCCCCC
Confidence 47999999999999999999999886
No 73
>2eyu_A Twitching motility protein PILT; pilus retraction motor, C-terminal domain PILT, protein transport; 1.87A {Aquifex aeolicus}
Probab=99.24 E-value=2.6e-12 Score=69.39 Aligned_cols=26 Identities=19% Similarity=0.130 Sum_probs=23.6
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhccc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQE 26 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~ 26 (79)
+++|+|||||||||+++++.|+++++
T Consensus 27 ~v~i~Gp~GsGKSTll~~l~g~~~~~ 52 (261)
T 2eyu_A 27 LILVTGPTGSGKSTTIASMIDYINQT 52 (261)
T ss_dssp EEEEECSTTCSHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCccHHHHHHHHHHhCCCC
Confidence 37899999999999999999998764
No 74
>3bk7_A ABC transporter ATP-binding protein; ABC ATPase, iron-sulfur cluster, adenosine diphosphate, nucleotide-binding; HET: ADP; 2.80A {Pyrococcus abyssi} PDB: 3j15_B*
Probab=99.24 E-value=2.8e-12 Score=75.84 Aligned_cols=26 Identities=31% Similarity=0.438 Sum_probs=24.1
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhccc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQE 26 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~ 26 (79)
+++|+||||||||||+++|+|+++|+
T Consensus 119 ~~~LiG~NGsGKSTLlkiL~Gll~p~ 144 (607)
T 3bk7_A 119 VVGIVGPNGTGKTTAVKILAGQLIPN 144 (607)
T ss_dssp EEEEECCTTSSHHHHHHHHTTSSCCC
T ss_pred EEEEECCCCChHHHHHHHHhCCCCCC
Confidence 47999999999999999999999876
No 75
>1kgd_A CASK, peripheral plasma membrane CASK; maguk, guanylate kinase like domain, protein binding; 1.31A {Homo sapiens} SCOP: c.37.1.1
Probab=99.22 E-value=5.9e-12 Score=64.51 Aligned_cols=24 Identities=21% Similarity=0.191 Sum_probs=21.9
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
+++|+||||||||||++.|.+..+
T Consensus 7 ~i~i~GpsGsGKSTL~~~L~~~~~ 30 (180)
T 1kgd_A 7 TLVLLGAHGVGRRHIKNTLITKHP 30 (180)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHCT
T ss_pred EEEEECCCCCCHHHHHHHHHhhCC
Confidence 378999999999999999999875
No 76
>2i3b_A HCR-ntpase, human cancer-related ntpase; AAA, rossmann, hydrolase; NMR {Homo sapiens} SCOP: c.37.1.11
Probab=99.22 E-value=7.9e-12 Score=64.73 Aligned_cols=24 Identities=38% Similarity=0.307 Sum_probs=22.4
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
+++|+|+||||||||+++|+|.++
T Consensus 3 ~i~i~G~nG~GKTTll~~l~g~~~ 26 (189)
T 2i3b_A 3 HVFLTGPPGVGKTTLIHKASEVLK 26 (189)
T ss_dssp CEEEESCCSSCHHHHHHHHHHHHH
T ss_pred EEEEECCCCChHHHHHHHHHhhcc
Confidence 479999999999999999999986
No 77
>4gp7_A Metallophosphoesterase; polynucleotide kinase phosphatase, RNA repair, transferase; HET: ATP CIT; 2.00A {Clostridium thermocellum} PDB: 4gp6_A*
Probab=99.21 E-value=8.4e-12 Score=63.55 Aligned_cols=19 Identities=37% Similarity=0.328 Sum_probs=16.9
Q ss_pred CeeEEcCCCCcHHHHHHHH
Q 044571 1 MEGLYGISCVGKTTLANFV 19 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i 19 (79)
+++|+||||||||||++++
T Consensus 11 i~~l~G~nGsGKSTl~~~~ 29 (171)
T 4gp7_A 11 LVVLIGSSGSGKSTFAKKH 29 (171)
T ss_dssp EEEEECCTTSCHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHH
Confidence 4789999999999999954
No 78
>2npi_A Protein CLP1; CLP1-PCF11 complex, ATP binding, ternary complex, transcript; HET: ATP; 2.95A {Saccharomyces cerevisiae}
Probab=99.21 E-value=5.9e-12 Score=72.50 Aligned_cols=41 Identities=22% Similarity=0.067 Sum_probs=32.3
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccCC---C-----CcEEEEEecCCc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEKI---F-----DEVGIATVSQDP 41 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~~---~-----~~~~~~~v~q~~ 41 (79)
+++|+||||||||||+|+|+|+.+++.. + ..+.++++||++
T Consensus 140 ~v~IvGpnGsGKSTLlr~L~Gl~~p~~G~~pI~vdg~~~~~i~~vpq~~ 188 (460)
T 2npi_A 140 RVVIVGGSQTGKTSLSRTLCSYALKFNAYQPLYINLDPQQPIFTVPGCI 188 (460)
T ss_dssp CEEEEESTTSSHHHHHHHHHHTTHHHHCCCCEEEECCTTSCSSSCSSCC
T ss_pred EEEEECCCCCCHHHHHHHHhCcccccCCceeEEEcCCccCCeeeeccch
Confidence 5799999999999999999999876522 1 123577888886
No 79
>1lw7_A Transcriptional regulator NADR; NMN, NMN adenylyl transferase, ribosylnicotinamide KINA transferase; HET: NAD; 2.90A {Haemophilus influenzae} SCOP: c.26.1.3 c.37.1.1
Probab=99.20 E-value=8.4e-12 Score=69.93 Aligned_cols=25 Identities=20% Similarity=0.287 Sum_probs=23.4
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhccc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLRQE 26 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~~~ 26 (79)
++|+|+||||||||+++|.|+++++
T Consensus 173 ~~IvG~nGsGKSTLlk~L~gl~~~~ 197 (365)
T 1lw7_A 173 VAILGGESSGKSVLVNKLAAVFNTT 197 (365)
T ss_dssp EEEECCTTSHHHHHHHHHHHHTTCE
T ss_pred EEEECCCCCCHHHHHHHHHHHhCCC
Confidence 6899999999999999999998875
No 80
>1rj9_A FTSY, signal recognition protein; SRP-GTPase domain, heterodimer, nucleotide twinning, protein complex, protein transport; HET: GCP; 1.90A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 2q9c_A* 2q9b_A* 2q9a_A* 1okk_D* 2xkv_D 2iyl_D* 2cnw_D* 2j7p_D*
Probab=99.19 E-value=1e-11 Score=68.35 Aligned_cols=52 Identities=17% Similarity=0.212 Sum_probs=37.7
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccC---------CCC------------cEEEEEecCCccH---HHHHHHHHH
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEK---------IFD------------EVGIATVSQDPDI---IKVQGELAK 52 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~---------~~~------------~~~~~~v~q~~~~---~~v~~~i~~ 52 (79)
+++|+|||||||||+++.|+++++++. .+. ...+++++|++.. .++.+++..
T Consensus 104 vi~lvG~nGsGKTTll~~Lagll~~~~g~V~l~g~D~~r~~a~~ql~~~~~~~~i~~v~q~~~~~p~~~v~~~v~~ 179 (304)
T 1rj9_A 104 VVLVVGVNGVGKTTTIAKLGRYYQNLGKKVMFCAGDTFRAAGGTQLSEWGKRLSIPVIQGPEGTDSAALAYDAVQA 179 (304)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHTTTCCEEEECCCCSSTTTTHHHHHHHHHHTCCEECCCTTCCHHHHHHHHHHH
T ss_pred EEEEECCCCCcHHHHHHHHHHHHHhcCCEEEEEeecCCChhHHHHHHHHHHhcCceEEEeCCCCCHHHHHHHHHHH
Confidence 478999999999999999999998861 111 1236789998632 456666654
No 81
>2jeo_A Uridine-cytidine kinase 1; UCK, transferase, ATP-binding, nucleoside kinase, nucleotide-binding; 2.50A {Homo sapiens} PDB: 2uvq_A*
Probab=99.18 E-value=1.1e-11 Score=66.21 Aligned_cols=51 Identities=20% Similarity=0.290 Sum_probs=34.1
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccCCC--CcEEEEEecCCc--cHHHHHHHHHH
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEKIF--DEVGIATVSQDP--DIIKVQGELAK 52 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~~~--~~~~~~~v~q~~--~~~~v~~~i~~ 52 (79)
++||+|||||||||++++|.+.+... .+ ....+++++|+. ...+..+++..
T Consensus 27 iigI~G~~GsGKSTl~k~L~~~lG~~-~~~~~~~~i~~v~~d~~~~~l~~~~~~~~ 81 (245)
T 2jeo_A 27 LIGVSGGTASGKSTVCEKIMELLGQN-EVEQRQRKVVILSQDRFYKVLTAEQKAKA 81 (245)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHTGG-GSCGGGCSEEEEEGGGGBCCCCHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHhchh-cccccCCceEEEeCCcCccccCHhHhhhh
Confidence 47999999999999999999976321 11 123567888874 11344454443
No 82
>1tq4_A IIGP1, interferon-inducible GTPase; interferon gamma, dimer, immunology, signaling protein; HET: GDP; 1.95A {Mus musculus} SCOP: c.37.1.8 PDB: 1tqd_A* 1tq6_A* 1tpz_A* 1tq2_A*
Probab=99.18 E-value=8.7e-12 Score=70.99 Aligned_cols=26 Identities=19% Similarity=0.192 Sum_probs=24.0
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhccc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQE 26 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~ 26 (79)
+++|+|+||+|||||+|+|.|+.+++
T Consensus 71 ~valvG~nGaGKSTLln~L~Gl~~p~ 96 (413)
T 1tq4_A 71 NVAVTGETGSGKSSFINTLRGIGNEE 96 (413)
T ss_dssp EEEEEECTTSSHHHHHHHHHTCCTTS
T ss_pred EEEEECCCCCcHHHHHHHHhCCCCcc
Confidence 37899999999999999999998876
No 83
>3b9q_A Chloroplast SRP receptor homolog, alpha subunit CPFTSY; protein translocation, GTP-binding, nucleotide-binding, protein transport; 1.75A {Arabidopsis thaliana}
Probab=99.18 E-value=9.7e-12 Score=68.35 Aligned_cols=52 Identities=21% Similarity=0.302 Sum_probs=37.0
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccC---------CCCc------------EEEEEecCCcc-H---HHHHHHHHH
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEK---------IFDE------------VGIATVSQDPD-I---IKVQGELAK 52 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~---------~~~~------------~~~~~v~q~~~-~---~~v~~~i~~ 52 (79)
+++|+|+|||||||+++.|+|.++++. .+.. ..+++++|++. . .++.+++..
T Consensus 102 vi~lvG~nGsGKTTll~~Lag~l~~~~g~V~l~g~d~~r~~a~~ql~~~~~~~~i~~v~q~~~~~~~~~~v~e~l~~ 178 (302)
T 3b9q_A 102 VIMIVGVNGGGKTTSLGKLAHRLKNEGTKVLMAAGDTFRAAASDQLEIWAERTGCEIVVAEGDKAKAATVLSKAVKR 178 (302)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEECCCCSCHHHHHHHHHHHHHHTCEEECCC--CCCHHHHHHHHHHH
T ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHcCCeEEEEeecccchhHHHHHHHHHHhcCceEEEecCCccCHHHHHHHHHHH
Confidence 478999999999999999999998761 1110 13688999765 3 456677654
No 84
>3lnc_A Guanylate kinase, GMP kinase; ALS collaborative crystallography, emerald biostructures, ATP-binding, cytoplasm, nucleotide-binding; HET: 5GP; 1.95A {Anaplasma phagocytophilum}
Probab=99.18 E-value=5.3e-12 Score=66.79 Aligned_cols=23 Identities=39% Similarity=0.216 Sum_probs=14.9
Q ss_pred CeeEEcCCCCcHHHHHHHHH-hhh
Q 044571 1 MEGLYGISCVGKTTLANFVG-NQL 23 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~-g~~ 23 (79)
+++|+|||||||||++++|. ++.
T Consensus 29 ii~l~Gp~GsGKSTl~~~L~~~~~ 52 (231)
T 3lnc_A 29 ILVLSSPSGCGKTTVANKLLEKQK 52 (231)
T ss_dssp EEEEECSCC----CHHHHHHC---
T ss_pred EEEEECCCCCCHHHHHHHHHhcCC
Confidence 47899999999999999999 887
No 85
>2pt7_A CAG-ALFA; ATPase, protein-protein complex, type IV secretion, hydrolas binding complex; 2.40A {Helicobacter pylori} SCOP: c.37.1.11 PDB: 1nly_A* 1nlz_A 1opx_A* 1g6o_A
Probab=99.17 E-value=1.2e-11 Score=68.63 Aligned_cols=26 Identities=23% Similarity=0.133 Sum_probs=24.2
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhccc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQE 26 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~ 26 (79)
+++|+|+||||||||+++|.|+++++
T Consensus 173 ~v~i~G~~GsGKTTll~~l~g~~~~~ 198 (330)
T 2pt7_A 173 NVIVCGGTGSGKTTYIKSIMEFIPKE 198 (330)
T ss_dssp CEEEEESTTSCHHHHHHHGGGGSCTT
T ss_pred EEEEECCCCCCHHHHHHHHhCCCcCC
Confidence 47899999999999999999999886
No 86
>2iw3_A Elongation factor 3A; acetylation, ATP-binding, protein biosynthesis, nucleotide-binding, phosphorylation, RNA- binding, rRNA-binding; HET: ADP; 2.4A {Saccharomyces cerevisiae} PDB: 2iwh_A* 2ix3_A 2ix8_A
Probab=99.17 E-value=6.1e-11 Score=73.16 Aligned_cols=51 Identities=24% Similarity=0.191 Sum_probs=33.0
Q ss_pred CeeEEcCCCCcHHHHHHHHHh-hhcccCCCCcEEEEEecCCc----cHHHHHHHHH
Q 044571 1 MEGLYGISCVGKTTLANFVGN-QLRQEKIFDEVGIATVSQDP----DIIKVQGELA 51 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g-~~~~~~~~~~~~~~~v~q~~----~~~~v~~~i~ 51 (79)
+++|+|+||||||||+|+|+| .+..........++|++|++ +..++.+++.
T Consensus 463 ~v~LiGpNGsGKSTLLk~LagG~i~g~~~~~~~~~~~v~q~~~~~~~~ltv~e~l~ 518 (986)
T 2iw3_A 463 RYGICGPNGCGKSTLMRAIANGQVDGFPTQEECRTVYVEHDIDGTHSDTSVLDFVF 518 (986)
T ss_dssp EEEEECSTTSSHHHHHHHHHHTCSTTCCCTTTSCEEETTCCCCCCCTTSBHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhCCCcCCCccccceeEEEEcccccccccCCcHHHHHH
Confidence 478999999999999999984 22100000112367888874 2246666665
No 87
>4a74_A DNA repair and recombination protein RADA; hydrolase, recombinase; HET: DNA ANP; 1.48A {Pyrococcus furiosus} PDB: 4a6x_A* 4a6p_A* 4a7o_A*
Probab=99.17 E-value=1.4e-11 Score=64.76 Aligned_cols=25 Identities=24% Similarity=0.336 Sum_probs=22.0
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQ 25 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~ 25 (79)
+++|+||||||||||+++|++...+
T Consensus 27 ~~~l~G~nGsGKSTll~~l~g~~~~ 51 (231)
T 4a74_A 27 ITEVFGEFGSGKTQLAHTLAVMVQL 51 (231)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHTTS
T ss_pred EEEEECCCCCCHHHHHHHHHHHHhc
Confidence 4789999999999999999996544
No 88
>2gza_A Type IV secretion system protein VIRB11; ATPase, hydrolase; 2.60A {Brucella suis}
Probab=99.16 E-value=1.9e-11 Score=68.58 Aligned_cols=55 Identities=15% Similarity=0.124 Sum_probs=37.4
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccC---------CC----CcEEEEEec-CCcc-----HHHHHHHHHHHhc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEK---------IF----DEVGIATVS-QDPD-----IIKVQGELAKSLG 55 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~---------~~----~~~~~~~v~-q~~~-----~~~v~~~i~~~~~ 55 (79)
+++|+||||||||||+++|.++++++. .+ ....+++++ |+.. ..++.+++...+.
T Consensus 177 ~i~ivG~sGsGKSTll~~l~~~~~~~~g~I~ie~~~e~~~~~~~~~v~~v~~q~~~~~~~~~~t~~~~i~~~l~ 250 (361)
T 2gza_A 177 VIVVAGETGSGKTTLMKALMQEIPFDQRLITIEDVPELFLPDHPNHVHLFYPSEAKEEENAPVTAATLLRSCLR 250 (361)
T ss_dssp CEEEEESSSSCHHHHHHHHHTTSCTTSCEEEEESSSCCCCTTCSSEEEEECC----------CCHHHHHHHHTT
T ss_pred EEEEECCCCCCHHHHHHHHHhcCCCCceEEEECCccccCccccCCEEEEeecCccccccccccCHHHHHHHHHh
Confidence 478999999999999999999998761 11 123577888 6643 2356677776654
No 89
>1sq5_A Pantothenate kinase; P-loop, transferase; HET: PAU ADP; 2.20A {Escherichia coli} SCOP: c.37.1.6 PDB: 1esm_A* 1esn_A*
Probab=99.16 E-value=1.6e-11 Score=67.52 Aligned_cols=24 Identities=29% Similarity=0.369 Sum_probs=22.4
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
++||+|+||||||||+++|.+++.
T Consensus 82 iigI~G~~GsGKSTl~~~L~~~l~ 105 (308)
T 1sq5_A 82 IISIAGSVAVGKSTTARVLQALLS 105 (308)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHh
Confidence 479999999999999999999876
No 90
>1zp6_A Hypothetical protein ATU3015; alpha-beta protein., structural genomics, PSI, protein struc initiative; 3.20A {Agrobacterium tumefaciens str} SCOP: c.37.1.25
Probab=99.15 E-value=1.6e-11 Score=63.05 Aligned_cols=22 Identities=32% Similarity=0.324 Sum_probs=20.5
Q ss_pred CeeEEcCCCCcHHHHHHHHHhh
Q 044571 1 MEGLYGISCVGKTTLANFVGNQ 22 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~ 22 (79)
+++|+|+|||||||++++|.+.
T Consensus 11 ~i~l~G~~GsGKSTl~~~La~~ 32 (191)
T 1zp6_A 11 ILLLSGHPGSGKSTIAEALANL 32 (191)
T ss_dssp EEEEEECTTSCHHHHHHHHHTC
T ss_pred EEEEECCCCCCHHHHHHHHHhc
Confidence 3789999999999999999997
No 91
>1qhl_A Protein (cell division protein MUKB); SMC, chromosome partitioning; 2.20A {Escherichia coli} SCOP: c.37.1.12
Probab=99.14 E-value=3e-12 Score=67.96 Aligned_cols=25 Identities=24% Similarity=0.167 Sum_probs=22.9
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhccc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLRQE 26 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~~~ 26 (79)
++|+||||||||||+++|++.+.|+
T Consensus 30 ~~i~GpnGsGKSTll~~i~g~~~~~ 54 (227)
T 1qhl_A 30 TTLSGGNGAGKSTTMAAFVTALIPD 54 (227)
T ss_dssp HHHHSCCSHHHHHHHHHHHHHHSCC
T ss_pred EEEECCCCCCHHHHHHHHhcccccC
Confidence 5789999999999999999998865
No 92
>2bbw_A Adenylate kinase 4, AK4; nucleotide kinase, nucleotide binding, human, structura genomics, structural genomics consortium, SGC, transferase; HET: GP5; 2.05A {Homo sapiens} PDB: 2ar7_A* 3ndp_A
Probab=99.13 E-value=2e-11 Score=65.16 Aligned_cols=26 Identities=15% Similarity=0.133 Sum_probs=22.7
Q ss_pred CeeEEcCCCCcHHHHHHHHH---hhhccc
Q 044571 1 MEGLYGISCVGKTTLANFVG---NQLRQE 26 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~---g~~~~~ 26 (79)
+++|+|+|||||||++++|. |...++
T Consensus 29 ~i~l~G~~GsGKSTl~k~La~~lg~~~~~ 57 (246)
T 2bbw_A 29 RAVILGPPGSGKGTVCQRIAQNFGLQHLS 57 (246)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHCCCCEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHhCCeEec
Confidence 37899999999999999999 876654
No 93
>2ehv_A Hypothetical protein PH0186; KAIC, RECA ATPase, unknown function; HET: ADP; 2.07A {Pyrococcus horikoshii} PDB: 2zts_A*
Probab=99.13 E-value=2.4e-11 Score=64.49 Aligned_cols=22 Identities=32% Similarity=0.137 Sum_probs=19.9
Q ss_pred CeeEEcCCCCcHHHHHHHHH--hh
Q 044571 1 MEGLYGISCVGKTTLANFVG--NQ 22 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~--g~ 22 (79)
+++|+||||||||||+++++ +.
T Consensus 32 ~~~l~GpnGsGKSTLl~~i~~~~~ 55 (251)
T 2ehv_A 32 TVLLTGGTGTGKTTFAAQFIYKGA 55 (251)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHH
Confidence 47899999999999999999 55
No 94
>2f1r_A Molybdopterin-guanine dinucleotide biosynthesis protein B (MOBB); structural genomics, PSI, protein structure initiative; 2.10A {Archaeoglobus fulgidus}
Probab=99.13 E-value=9e-12 Score=63.63 Aligned_cols=26 Identities=35% Similarity=0.350 Sum_probs=23.9
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhccc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQE 26 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~ 26 (79)
+++|+|+||||||||++.|.++++++
T Consensus 4 ~v~IvG~SGsGKSTL~~~L~~~~~~~ 29 (171)
T 2f1r_A 4 ILSIVGTSDSGKTTLITRMMPILRER 29 (171)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHHHhhhc
Confidence 37899999999999999999998875
No 95
>3e70_C DPA, signal recognition particle receptor; FTSY, SRP-GTPase, protein-targeting, transport protein; HET: GDP; 1.97A {Pyrococcus furiosus} PDB: 3dmd_B 3dm9_B*
Probab=99.13 E-value=2.4e-11 Score=67.46 Aligned_cols=26 Identities=27% Similarity=0.285 Sum_probs=24.0
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhccc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQE 26 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~ 26 (79)
+++|+|||||||||+++.|++.++++
T Consensus 131 vi~lvG~nGaGKTTll~~Lag~l~~~ 156 (328)
T 3e70_C 131 VIMFVGFNGSGKTTTIAKLANWLKNH 156 (328)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHhc
Confidence 47899999999999999999999876
No 96
>2og2_A Putative signal recognition particle receptor; nucleotide-binding, protein transport; 2.00A {Arabidopsis thaliana}
Probab=99.13 E-value=2.4e-11 Score=68.15 Aligned_cols=52 Identities=21% Similarity=0.302 Sum_probs=38.1
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccC---------CCCc------------EEEEEecCCcc-H---HHHHHHHHH
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEK---------IFDE------------VGIATVSQDPD-I---IKVQGELAK 52 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~---------~~~~------------~~~~~v~q~~~-~---~~v~~~i~~ 52 (79)
+++|+|+|||||||+++.|++.++++. .+.. ..+.+++|++. . .++.+++..
T Consensus 159 vi~lvG~nGsGKTTll~~Lag~l~~~~G~V~l~g~D~~r~~a~eql~~~~~r~~i~~v~q~~~~~~p~~tv~e~l~~ 235 (359)
T 2og2_A 159 VIMIVGVNGGGKTTSLGKLAHRLKNEGTKVLMAAGDTFRAAASDQLEIWAERTGCEIVVAEGDKAKAATVLSKAVKR 235 (359)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEECCCCSCHHHHHHHHHHHHHHTCEEECCSSSSCCHHHHHHHHHHH
T ss_pred EEEEEcCCCChHHHHHHHHHhhccccCCEEEEecccccccchhHHHHHHHHhcCeEEEEecccccChhhhHHHHHHH
Confidence 478999999999999999999988751 1110 13688999765 2 456677654
No 97
>2j41_A Guanylate kinase; GMP, GMK, transferase, ATP-binding, nucleotide- binding; HET: 5GP; 1.9A {Staphylococcus aureus}
Probab=99.12 E-value=3.1e-11 Score=62.63 Aligned_cols=25 Identities=28% Similarity=0.185 Sum_probs=22.3
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQ 25 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~ 25 (79)
+++|+|+|||||||+++.|.+...+
T Consensus 8 ~i~l~G~~GsGKSTl~~~L~~~~~~ 32 (207)
T 2j41_A 8 LIVLSGPSGVGKGTVRKRIFEDPST 32 (207)
T ss_dssp EEEEECSTTSCHHHHHHHHHHCTTC
T ss_pred EEEEECCCCCCHHHHHHHHHHhhCC
Confidence 3789999999999999999998744
No 98
>2obl_A ESCN; ATPase, hydrolase; 1.80A {Escherichia coli O127} PDB: 2obm_A*
Probab=99.12 E-value=3e-11 Score=67.52 Aligned_cols=26 Identities=31% Similarity=0.428 Sum_probs=23.9
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhccc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQE 26 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~ 26 (79)
+++|+|+||+|||||+++|.|+..++
T Consensus 73 ~~gIiG~nGaGKTTLl~~I~g~~~~~ 98 (347)
T 2obl_A 73 RIGIFAGSGVGKSTLLGMICNGASAD 98 (347)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHSCCS
T ss_pred EEEEECCCCCCHHHHHHHHhcCCCCC
Confidence 37899999999999999999998876
No 99
>1kag_A SKI, shikimate kinase I; transferase, structural genomics, PSI, protein structure initiative; 2.05A {Escherichia coli} SCOP: c.37.1.2
Probab=99.12 E-value=5e-11 Score=60.38 Aligned_cols=25 Identities=28% Similarity=0.233 Sum_probs=22.1
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQ 25 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~ 25 (79)
+++|+|+|||||||+++.|.+.+.+
T Consensus 6 ~i~l~G~~GsGKSTl~~~La~~l~~ 30 (173)
T 1kag_A 6 NIFLVGPMGAGKSTIGRQLAQQLNM 30 (173)
T ss_dssp CEEEECCTTSCHHHHHHHHHHHTTC
T ss_pred eEEEECCCCCCHHHHHHHHHHHhCC
Confidence 4789999999999999999987653
No 100
>3jvv_A Twitching mobility protein; hexameric P-loop ATPase, secretion ATPase, ATP-binding, FIMB nucleotide-binding, transport; HET: ACP CIT; 2.60A {Pseudomonas aeruginosa} PDB: 3jvu_A*
Probab=99.12 E-value=2.3e-11 Score=68.20 Aligned_cols=26 Identities=19% Similarity=0.133 Sum_probs=23.5
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhccc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQE 26 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~ 26 (79)
+++|+|||||||||+++++.+.+++.
T Consensus 125 ~i~I~GptGSGKTTlL~~l~g~~~~~ 150 (356)
T 3jvv_A 125 LVLVTGPTGSGKSTTLAAMLDYLNNT 150 (356)
T ss_dssp EEEEECSTTSCHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHhcccCC
Confidence 37899999999999999999998764
No 101
>1u0l_A Probable GTPase ENGC; permutation, OB-fold, zinc-finger, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; HET: GDP; 2.80A {Thermotoga maritima} SCOP: b.40.4.5 c.37.1.8
Probab=99.11 E-value=2.8e-11 Score=66.40 Aligned_cols=26 Identities=31% Similarity=0.506 Sum_probs=23.8
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhccc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQE 26 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~ 26 (79)
+++|+|+||+|||||+++|.|+.+|+
T Consensus 171 iv~l~G~sG~GKSTll~~l~g~~~~~ 196 (301)
T 1u0l_A 171 ISTMAGLSGVGKSSLLNAINPGLKLR 196 (301)
T ss_dssp EEEEECSTTSSHHHHHHHHSTTCCCC
T ss_pred eEEEECCCCCcHHHHHHHhccccccc
Confidence 36899999999999999999998876
No 102
>3tau_A Guanylate kinase, GMP kinase; structural genomics, center for structural genomics of infec diseases, csgid, putative guanylate kinase; HET: MSE; 2.05A {Listeria monocytogenes}
Probab=99.11 E-value=3.9e-11 Score=62.74 Aligned_cols=25 Identities=32% Similarity=0.209 Sum_probs=22.6
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQ 25 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~ 25 (79)
+++|+|||||||||+++.|.+.+++
T Consensus 10 ~i~l~GpsGsGKsTl~~~L~~~~~~ 34 (208)
T 3tau_A 10 LIVLSGPSGVGKGTVREAVFKDPET 34 (208)
T ss_dssp EEEEECCTTSCHHHHHHHHHHSTTC
T ss_pred EEEEECcCCCCHHHHHHHHHhhCCC
Confidence 3789999999999999999998865
No 103
>4eun_A Thermoresistant glucokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Janibacter SP}
Probab=99.11 E-value=4e-11 Score=62.24 Aligned_cols=23 Identities=35% Similarity=0.385 Sum_probs=20.9
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhh
Q 044571 1 MEGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~ 23 (79)
+++|+|+|||||||++++|.+.+
T Consensus 31 ~i~l~G~~GsGKSTl~~~L~~~~ 53 (200)
T 4eun_A 31 HVVVMGVSGSGKTTIAHGVADET 53 (200)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHhh
Confidence 37899999999999999999875
No 104
>3kta_A Chromosome segregation protein SMC; structural maintenance of chromosomes, ABC ATPase, CFTR adenylate kinase, AP5A, transferase; HET: AP5; 1.63A {Pyrococcus furiosus} PDB: 1xex_A* 1xew_X*
Probab=99.09 E-value=5.4e-11 Score=60.79 Aligned_cols=24 Identities=17% Similarity=0.237 Sum_probs=21.4
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhcc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLRQ 25 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~~ 25 (79)
.+|+|+|||||||++++|...+.+
T Consensus 29 ~~i~G~NGsGKStll~ai~~~l~~ 52 (182)
T 3kta_A 29 TAIVGANGSGKSNIGDAILFVLGG 52 (182)
T ss_dssp EEEEECTTSSHHHHHHHHHHHTTC
T ss_pred EEEECCCCCCHHHHHHHHHHHHcC
Confidence 579999999999999999987654
No 105
>2yhs_A FTSY, cell division protein FTSY; cell cycle, protein targeting, simibi class GTPase, GTP-BIND membrane, nucleotide-binding; 1.60A {Escherichia coli} PDB: 2qy9_A 2xxa_B* 1fts_A
Probab=99.09 E-value=4.3e-11 Score=69.45 Aligned_cols=54 Identities=20% Similarity=0.267 Sum_probs=39.1
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccC---------CCC------------cEEEEEecCCcc---HHHHHHHHHHHh
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEK---------IFD------------EVGIATVSQDPD---IIKVQGELAKSL 54 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~---------~~~------------~~~~~~v~q~~~---~~~v~~~i~~~~ 54 (79)
+++|+|+||||||||+++|+|+++++. .+. ...+++++|++. ..++.+++....
T Consensus 295 VI~LVGpNGSGKTTLl~~LAgll~~~~G~V~l~g~D~~r~aa~eQL~~~~~r~~I~vV~Q~~~~~p~~tV~e~l~~a~ 372 (503)
T 2yhs_A 295 VILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVIAQHTGADSASVIFDAIQAAK 372 (503)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEECCCTTCHHHHHHHHHHHHHHTCCEECCSTTCCHHHHHHHHHHHHH
T ss_pred EEEEECCCcccHHHHHHHHHHHhhhcCCeEEEecCcccchhhHHHHHHHHHhcCceEEecccCcCHHHHHHHHHHHHH
Confidence 478999999999999999999987751 111 113678999863 356777776543
No 106
>2bdt_A BH3686; alpha-beta protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG, function; 2.40A {Bacillus halodurans} SCOP: c.37.1.25
Probab=99.08 E-value=5.7e-11 Score=61.06 Aligned_cols=23 Identities=30% Similarity=0.325 Sum_probs=20.2
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhh
Q 044571 1 MEGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~ 23 (79)
+++|+|+|||||||+++.|.+..
T Consensus 4 ii~l~G~~GaGKSTl~~~L~~~~ 26 (189)
T 2bdt_A 4 LYIITGPAGVGKSTTCKRLAAQL 26 (189)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHS
T ss_pred EEEEECCCCCcHHHHHHHHhccc
Confidence 36899999999999999998743
No 107
>1p9r_A General secretion pathway protein E; bacterial type II secretion system cytoplasmic protein - GSPE, putative ATPase/ ATP binding protein; 2.50A {Vibrio cholerae} SCOP: c.37.1.11 PDB: 1p9w_A*
Probab=99.08 E-value=6.4e-11 Score=67.58 Aligned_cols=26 Identities=19% Similarity=0.064 Sum_probs=23.6
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhccc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQE 26 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~ 26 (79)
+++|+|||||||||+++++.+.+++.
T Consensus 169 ii~I~GpnGSGKTTlL~allg~l~~~ 194 (418)
T 1p9r_A 169 IILVTGPTGSGKSTTLYAGLQELNSS 194 (418)
T ss_dssp EEEEECSTTSCHHHHHHHHHHHHCCT
T ss_pred eEEEECCCCCCHHHHHHHHHhhcCCC
Confidence 36899999999999999999998775
No 108
>2dpy_A FLII, flagellum-specific ATP synthase; beta barrel, alpha-beta structure, hydrolase; HET: ADP; 2.40A {Salmonella typhimurium}
Probab=99.08 E-value=5.7e-11 Score=68.12 Aligned_cols=26 Identities=31% Similarity=0.441 Sum_probs=24.0
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhccc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQE 26 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~ 26 (79)
+++|+|+||||||||+++|.|+.+++
T Consensus 159 ~~~IvG~sGsGKSTLl~~Iag~~~~~ 184 (438)
T 2dpy_A 159 RMGLFAGSGVGKSVLLGMMARYTRAD 184 (438)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHSCCS
T ss_pred EEEEECCCCCCHHHHHHHHhcccCCC
Confidence 36899999999999999999999876
No 109
>3tqc_A Pantothenate kinase; biosynthesis of cofactors, prosthetic groups, carriers, TRAN; HET: ADP; 2.30A {Coxiella burnetii}
Probab=99.07 E-value=6.3e-11 Score=65.63 Aligned_cols=39 Identities=23% Similarity=0.337 Sum_probs=28.0
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccCCCCcEEEEEecCCc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEKIFDEVGIATVSQDP 41 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~~~~~~~~~~v~q~~ 41 (79)
++||+|+|||||||++++|.+++... .....++.+++|.
T Consensus 94 iigI~GpsGSGKSTl~~~L~~ll~~~--~~~~~v~~i~~D~ 132 (321)
T 3tqc_A 94 IIGIAGSVAVGKSTTSRVLKALLSRW--PDHPNVEVITTDG 132 (321)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHTTS--TTCCCEEEEEGGG
T ss_pred EEEEECCCCCCHHHHHHHHHHHhccc--CCCCeEEEEeecc
Confidence 47999999999999999999987632 1112345555553
No 110
>3uie_A Adenylyl-sulfate kinase 1, chloroplastic; rossmann fold, transferase-transferase complex; HET: ADX ANP; 1.79A {Arabidopsis thaliana} SCOP: c.37.1.0 PDB: 4fxp_A*
Probab=99.07 E-value=7e-11 Score=61.34 Aligned_cols=24 Identities=33% Similarity=0.329 Sum_probs=21.8
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
+++|+|+|||||||+++.|.+.+.
T Consensus 27 ~i~l~G~sGsGKSTl~~~La~~l~ 50 (200)
T 3uie_A 27 VIWVTGLSGSGKSTLACALNQMLY 50 (200)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHH
Confidence 378999999999999999999875
No 111
>4e22_A Cytidylate kinase; P-loop, CMP/ATP binding, transferase; 2.32A {Yersinia pseudotuberculosis}
Probab=99.07 E-value=5.3e-11 Score=63.87 Aligned_cols=26 Identities=27% Similarity=0.199 Sum_probs=21.9
Q ss_pred CeeEEcCCCCcHHHHHHHHH---hhhccc
Q 044571 1 MEGLYGISCVGKTTLANFVG---NQLRQE 26 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~---g~~~~~ 26 (79)
+++|+|+|||||||++++|. |...++
T Consensus 29 ~I~I~G~~GsGKSTl~k~La~~Lg~~~~d 57 (252)
T 4e22_A 29 VITVDGPSGAGKGTLCKALAESLNWRLLD 57 (252)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHTTCEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHhcCCCcCC
Confidence 37999999999999999999 655443
No 112
>2oap_1 GSPE-2, type II secretion system protein; hexameric ATPase, hydrolase; HET: ANP; 2.95A {Archaeoglobus fulgidus} PDB: 2oaq_1
Probab=99.06 E-value=8.9e-11 Score=68.42 Aligned_cols=26 Identities=23% Similarity=0.165 Sum_probs=24.0
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhccc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQE 26 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~ 26 (79)
.++|+|||||||||+++++.++++++
T Consensus 262 ~i~I~GptGSGKTTlL~aL~~~i~~~ 287 (511)
T 2oap_1 262 SAIVVGETASGKTTTLNAIMMFIPPD 287 (511)
T ss_dssp CEEEEESTTSSHHHHHHHHGGGSCTT
T ss_pred EEEEECCCCCCHHHHHHHHHhhCCCC
Confidence 37899999999999999999999876
No 113
>2ewv_A Twitching motility protein PILT; pilus retraction motor, ATPase, hexameric PILT, protein TRAN; HET: ADP; 2.80A {Aquifex aeolicus} PDB: 2eww_A* 2gsz_A*
Probab=99.06 E-value=6.8e-11 Score=66.59 Aligned_cols=26 Identities=19% Similarity=0.130 Sum_probs=23.4
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhccc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQE 26 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~ 26 (79)
+++|+|||||||||++++|.+.+++.
T Consensus 138 ~i~ivG~~GsGKTTll~~l~~~~~~~ 163 (372)
T 2ewv_A 138 LILVTGPTGSGKSTTIASMIDYINQT 163 (372)
T ss_dssp EEEEECSSSSSHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHhhcCcC
Confidence 37899999999999999999998764
No 114
>2qm8_A GTPase/ATPase; G protein, G3E, metallochaperone, chaperone; HET: MSE; 1.70A {Methylobacterium extorquens} SCOP: c.37.1.10 PDB: 2qm7_A*
Probab=99.04 E-value=9.7e-11 Score=65.22 Aligned_cols=26 Identities=31% Similarity=0.492 Sum_probs=23.4
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhccc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQE 26 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~ 26 (79)
+++|+|+||||||||+++|.+.+.++
T Consensus 57 ~v~i~G~~GaGKSTLl~~l~g~~~~~ 82 (337)
T 2qm8_A 57 RVGITGVPGVGKSTTIDALGSLLTAA 82 (337)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHHhhhhC
Confidence 47899999999999999999988764
No 115
>2rcn_A Probable GTPase ENGC; YJEQ, circularly permuted, GTP-binding, hydrolase, nucleotide-binding; HET: GDP; 2.25A {Salmonella typhimurium} PDB: 2ykr_W 4a2i_V
Probab=99.03 E-value=1.1e-10 Score=65.42 Aligned_cols=41 Identities=17% Similarity=0.047 Sum_probs=31.4
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhc-ccC---CCC---------cEEEEEecCCc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLR-QEK---IFD---------EVGIATVSQDP 41 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~-~~~---~~~---------~~~~~~v~q~~ 41 (79)
+++|+|+||+|||||+++|.|... +.. ... ...+++++|+.
T Consensus 217 ~~~lvG~sG~GKSTLln~L~g~~~~~~~G~I~~~~G~g~~tt~~~~i~~v~q~~ 270 (358)
T 2rcn_A 217 ISIFAGQSGVGKSSLLNALLGLQNEILTNDVSNVSGLGQHTTTAARLYHFPHGG 270 (358)
T ss_dssp EEEEECCTTSSHHHHHHHHHCCSSCCCCC-------------CCCEEEECTTSC
T ss_pred EEEEECCCCccHHHHHHHHhccccccccCCccccCCCCccceEEEEEEEECCCC
Confidence 378999999999999999999987 651 111 23578898875
No 116
>2qag_B Septin-6, protein NEDD5; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=99.02 E-value=9.7e-11 Score=66.95 Aligned_cols=40 Identities=18% Similarity=-0.014 Sum_probs=27.8
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhccc---C----CCCcEEEEEecCCc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLRQE---K----IFDEVGIATVSQDP 41 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~~~---~----~~~~~~~~~v~q~~ 41 (79)
++|+|+||+|||||+++|+|..-.. . ......+++++|++
T Consensus 45 vaLvG~nGaGKSTLln~L~G~~l~g~~~~~~~~~~~~~~i~~v~Q~~ 91 (427)
T 2qag_B 45 ILCVGETGLGKSTLMDTLFNTKFEGEPATHTQPGVQLQSNTYDLQES 91 (427)
T ss_dssp EEEECSTTSSSHHHHHHHHTSCC-------CCSSCEEEEEEEEEEC-
T ss_pred EEEECCCCCCHHHHHHHHhCccccCCcCCCCCccceEeeEEEEeecC
Confidence 7999999999999999999984211 0 01123577788875
No 117
>1rz3_A Hypothetical protein rbstp0775; MCSG, structural genomics, PSI, protein structure initiative; 1.90A {Geobacillus stearothermophilus} SCOP: c.37.1.6
Probab=99.01 E-value=1.3e-10 Score=60.38 Aligned_cols=26 Identities=46% Similarity=0.657 Sum_probs=23.0
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhccc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQE 26 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~ 26 (79)
+++|+|+|||||||+++.+.+.+++.
T Consensus 24 ~i~i~G~~GsGKstl~~~l~~~~~~~ 49 (201)
T 1rz3_A 24 VLGIDGLSRSGKTTLANQLSQTLREQ 49 (201)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHhhc
Confidence 47899999999999999999987653
No 118
>3ney_A 55 kDa erythrocyte membrane protein; structural genomics consortium, SGC, 55 kDa erythrocyte MEMB protein; 2.26A {Homo sapiens} SCOP: c.37.1.0
Probab=99.01 E-value=1.8e-10 Score=60.04 Aligned_cols=24 Identities=29% Similarity=0.245 Sum_probs=21.6
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
+++|+||||+|||||++.|.+..+
T Consensus 21 ~ivl~GPSGaGKsTL~~~L~~~~~ 44 (197)
T 3ney_A 21 TLVLIGASGVGRSHIKNALLSQNP 44 (197)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHCT
T ss_pred EEEEECcCCCCHHHHHHHHHhhCC
Confidence 368999999999999999998865
No 119
>1cke_A CK, MSSA, protein (cytidine monophosphate kinase); nucleotide monophosphate kinase,, transferase; 1.75A {Escherichia coli} SCOP: c.37.1.1 PDB: 1kdo_A* 1kdp_A* 1kdr_A* 1kdt_A* 2cmk_A* 2fem_A 2feo_A*
Probab=99.00 E-value=1.9e-10 Score=60.47 Aligned_cols=22 Identities=32% Similarity=0.327 Sum_probs=20.5
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|++||||||+++.+.+.+
T Consensus 8 i~i~G~~GsGKSTl~~~L~~~~ 29 (227)
T 1cke_A 8 ITIDGPSGAGKGTLCKAMAEAL 29 (227)
T ss_dssp EEEECCTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHh
Confidence 7899999999999999998865
No 120
>1knq_A Gluconate kinase; ALFA/beta structure, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.17 PDB: 1ko1_A 1ko4_A 1ko5_A* 1ko8_A* 1kof_A*
Probab=99.00 E-value=2.2e-10 Score=58.22 Aligned_cols=23 Identities=39% Similarity=0.495 Sum_probs=20.5
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhh
Q 044571 1 MEGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~ 23 (79)
+++|+|+|||||||+++.+.+.+
T Consensus 10 ~i~l~G~~GsGKSTl~~~l~~~~ 32 (175)
T 1knq_A 10 IYVLMGVSGSGKSAVASEVAHQL 32 (175)
T ss_dssp EEEEECSTTSCHHHHHHHHHHHH
T ss_pred EEEEEcCCCCCHHHHHHHHHHhh
Confidence 37899999999999999998764
No 121
>2yv5_A YJEQ protein; hydrolase, GTPase, permutation, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: GDP; 1.90A {Aquifex aeolicus}
Probab=98.99 E-value=2.1e-10 Score=63.05 Aligned_cols=25 Identities=24% Similarity=0.170 Sum_probs=22.3
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhccc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQE 26 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~ 26 (79)
+++++|+||+|||||+++|. ..++.
T Consensus 167 i~~l~G~sG~GKSTLln~l~-~~~~~ 191 (302)
T 2yv5_A 167 ICILAGPSGVGKSSILSRLT-GEELR 191 (302)
T ss_dssp EEEEECSTTSSHHHHHHHHH-SCCCC
T ss_pred EEEEECCCCCCHHHHHHHHH-HhhCc
Confidence 36899999999999999999 87765
No 122
>3ec2_A DNA replication protein DNAC; helicase loader, replication initiation factor, ATP-binding, nucleotide-binding; HET: DNA ADP; 2.70A {Aquifex aeolicus} PDB: 3ecc_A*
Probab=98.99 E-value=2.2e-10 Score=58.51 Aligned_cols=24 Identities=29% Similarity=0.230 Sum_probs=21.9
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhcc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLRQ 25 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~~ 25 (79)
++|+||||+|||||++++++...+
T Consensus 41 ~~l~G~~G~GKTtL~~~i~~~~~~ 64 (180)
T 3ec2_A 41 LTFVGSPGVGKTHLAVATLKAIYE 64 (180)
T ss_dssp EEECCSSSSSHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHHH
Confidence 678999999999999999999864
No 123
>2x8a_A Nuclear valosin-containing protein-like; nuclear protein; 2.60A {Homo sapiens}
Probab=98.97 E-value=4e-10 Score=61.18 Aligned_cols=24 Identities=38% Similarity=0.259 Sum_probs=21.7
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhcc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLRQ 25 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~~ 25 (79)
++|+||||||||||+++|++...+
T Consensus 47 vlL~Gp~GtGKTtLakala~~~~~ 70 (274)
T 2x8a_A 47 VLLAGPPGCGKTLLAKAVANESGL 70 (274)
T ss_dssp EEEESSTTSCHHHHHHHHHHHTTC
T ss_pred EEEECCCCCcHHHHHHHHHHHcCC
Confidence 578999999999999999998765
No 124
>1t9h_A YLOQ, probable GTPase ENGC; N-terminal beta-barrel domain with oligonucleotide binding fold, central GTP binding domain; 1.60A {Bacillus subtilis} SCOP: b.40.4.5 c.37.1.8
Probab=98.96 E-value=4.9e-11 Score=65.74 Aligned_cols=26 Identities=31% Similarity=0.351 Sum_probs=19.7
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhccc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQE 26 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~ 26 (79)
+++|+|+||+|||||+++|.|..++.
T Consensus 175 ~~~lvG~sG~GKSTLln~L~g~~~~~ 200 (307)
T 1t9h_A 175 TTVFAGQSGVGKSSLLNAISPELGLR 200 (307)
T ss_dssp EEEEEESHHHHHHHHHHHHCC-----
T ss_pred EEEEECCCCCCHHHHHHHhccccccc
Confidence 36899999999999999999988765
No 125
>2vp4_A Deoxynucleoside kinase; ATP-binding, DNA synthesis, phosphoprotein, feedback inhibition, deoxyribonucleoside kinase, salvage pathway; HET: DCP; 2.20A {Drosophila melanogaster} SCOP: c.37.1.1 PDB: 1j90_A* 2jj8_A* 2vp2_A* 1oe0_A* 2vp5_A* 2vp6_A* 2vp9_A* 2vpp_A* 2vqs_A* 2vp0_A* 1ot3_A* 2jcs_A* 1zm7_A* 1zmx_A*
Probab=98.96 E-value=1.9e-10 Score=60.89 Aligned_cols=22 Identities=27% Similarity=0.122 Sum_probs=20.4
Q ss_pred CeeEEcCCCCcHHHHHHHHHhh
Q 044571 1 MEGLYGISCVGKTTLANFVGNQ 22 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~ 22 (79)
+++|.|+|||||||++++|.+.
T Consensus 22 ~i~i~G~~GsGKSTl~~~L~~~ 43 (230)
T 2vp4_A 22 TVLIEGNIGSGKTTYLNHFEKY 43 (230)
T ss_dssp EEEEECSTTSCHHHHHHTTGGG
T ss_pred EEEEECCCCCCHHHHHHHHHhc
Confidence 4789999999999999999987
No 126
>1jjv_A Dephospho-COA kinase; P-loop nucleotide-binding fold, structure 2 function project, S2F, structural genomics, transferase; HET: ATP; 2.00A {Haemophilus influenzae} SCOP: c.37.1.1
Probab=98.95 E-value=3.6e-10 Score=58.74 Aligned_cols=22 Identities=41% Similarity=0.486 Sum_probs=19.9
Q ss_pred CeeEEcCCCCcHHHHHHHHHhh
Q 044571 1 MEGLYGISCVGKTTLANFVGNQ 22 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~ 22 (79)
+++|+|++||||||+++.+.++
T Consensus 4 ~i~l~G~~GsGKST~~~~La~l 25 (206)
T 1jjv_A 4 IVGLTGGIGSGKTTIANLFTDL 25 (206)
T ss_dssp EEEEECSTTSCHHHHHHHHHTT
T ss_pred EEEEECCCCCCHHHHHHHHHHC
Confidence 3799999999999999999873
No 127
>2kjq_A DNAA-related protein; solution structure, NESG, structural genomics, PSI-2, protei structure initiative; NMR {Neisseria meningitidis serogroup B}
Probab=98.95 E-value=2.5e-10 Score=57.09 Aligned_cols=25 Identities=20% Similarity=0.114 Sum_probs=22.5
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhccc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLRQE 26 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~~~ 26 (79)
++|+||+|+|||||++++.+...+.
T Consensus 39 ~~l~G~~G~GKTtL~~~i~~~~~~~ 63 (149)
T 2kjq_A 39 IYVWGEEGAGKSHLLQAWVAQALEA 63 (149)
T ss_dssp EEEESSSTTTTCHHHHHHHHHHHTT
T ss_pred EEEECCCCCCHHHHHHHHHHHHHhc
Confidence 6899999999999999999988653
No 128
>1oix_A RAS-related protein RAB-11A; small G protein, intracellular trafficking, GTP-binding, lipoprotein, prenylation, protein transport; HET: GDP; 1.7A {Homo sapiens} SCOP: c.37.1.8 PDB: 1oiw_A* 1oiv_A* 3rwo_B* 3rwm_B*
Probab=98.94 E-value=5e-10 Score=57.66 Aligned_cols=24 Identities=29% Similarity=0.162 Sum_probs=21.7
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhcc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLRQ 25 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~~ 25 (79)
++|+|+||+|||||++.+.+...+
T Consensus 32 v~lvG~~g~GKSTLl~~l~~~~~~ 55 (191)
T 1oix_A 32 VVLIGDSGVGKSNLLSRFTRNEFN 55 (191)
T ss_dssp EEEEECTTSSHHHHHHHHHHSCCC
T ss_pred EEEECcCCCCHHHHHHHHhcCCCC
Confidence 689999999999999999998654
No 129
>3ux8_A Excinuclease ABC, A subunit; UVRA, nucleotide excision repair, DNA repair, ABC ATPase, DN binding protein; HET: ADP; 2.10A {Geobacillus}
Probab=98.94 E-value=3e-10 Score=67.87 Aligned_cols=16 Identities=44% Similarity=0.574 Sum_probs=14.9
Q ss_pred CeeEEcCCCCcHHHHH
Q 044571 1 MEGLYGISCVGKTTLA 16 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~ 16 (79)
+++|+||||||||||+
T Consensus 46 ~~~liGpNGaGKSTLl 61 (670)
T 3ux8_A 46 LVVLTGLSGSGKSSLA 61 (670)
T ss_dssp EEEEECSTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHh
Confidence 4799999999999998
No 130
>1odf_A YGR205W, hypothetical 33.3 kDa protein in ADE3-Ser2 intergenic region; yeast protein, ATP binding protein; 2.25A {Saccharomyces cerevisiae} SCOP: c.37.1.6
Probab=98.93 E-value=4.7e-10 Score=61.44 Aligned_cols=51 Identities=22% Similarity=0.036 Sum_probs=34.2
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccCCCCcEEEEEecCCccH--HHHHHHHHH
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEKIFDEVGIATVSQDPDI--IKVQGELAK 52 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~~~~~~~~~~v~q~~~~--~~v~~~i~~ 52 (79)
+++|+|++|||||||++.|.+.+.+.. .......+|+||... .+..+++..
T Consensus 33 ii~I~G~sGsGKSTla~~L~~~l~~~g-~~~~~~~iv~~D~f~~~~~~~~~l~~ 85 (290)
T 1odf_A 33 FIFFSGPQGSGKSFTSIQIYNHLMEKY-GGEKSIGYASIDDFYLTHEDQLKLNE 85 (290)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHHHH-GGGSCEEEEEGGGGBCCHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHhhhcC-CCCceEEEeccccccCChHHHHHHhc
Confidence 479999999999999999999987631 011234455888532 244455543
No 131
>1tf7_A KAIC; homohexamer, hexamer, circadian clock protein; HET: ATP; 2.80A {Synechococcus SP} SCOP: c.37.1.11 c.37.1.11 PDB: 3s1a_A* 1u9i_A* 2gbl_A* 3dvl_A* 3k0a_A* 3k09_A* 3jzm_A* 3k0e_A* 4dug_A* 3ua2_A* 3k0c_A* 3k0f_A*
Probab=98.93 E-value=4.2e-10 Score=65.68 Aligned_cols=26 Identities=19% Similarity=0.130 Sum_probs=23.0
Q ss_pred CeeEEcCCCCcHHHHHHH--HHhhhccc
Q 044571 1 MEGLYGISCVGKTTLANF--VGNQLRQE 26 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~--i~g~~~~~ 26 (79)
+++|+||||||||||+++ +.|+.++.
T Consensus 41 ~~~l~G~nGsGKSTL~~~~ll~Gl~~~~ 68 (525)
T 1tf7_A 41 STLVSGTSGTGKTLFSIQFLYNGIIEFD 68 (525)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHHHC
T ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHhCC
Confidence 478999999999999999 68998864
No 132
>1cr0_A DNA primase/helicase; RECA-type protein fold, transferase; HET: DNA; 2.30A {Enterobacteria phage T7} SCOP: c.37.1.11 PDB: 1cr1_A* 1cr2_A* 1cr4_A* 1e0j_A* 1e0k_A*
Probab=98.92 E-value=4.6e-10 Score=61.23 Aligned_cols=26 Identities=19% Similarity=0.049 Sum_probs=23.6
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhccc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQE 26 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~ 26 (79)
+++|+|+||+|||||++.|++...+.
T Consensus 37 ~~~i~G~~G~GKTTl~~~ia~~~~~~ 62 (296)
T 1cr0_A 37 VIMVTSGSGMGKSTFVRQQALQWGTA 62 (296)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHT
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHH
Confidence 46899999999999999999998775
No 133
>2if2_A Dephospho-COA kinase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 3.00A {Aquifex aeolicus}
Probab=98.91 E-value=5.8e-10 Score=57.85 Aligned_cols=21 Identities=33% Similarity=0.392 Sum_probs=19.6
Q ss_pred CeeEEcCCCCcHHHHHHHHHh
Q 044571 1 MEGLYGISCVGKTTLANFVGN 21 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g 21 (79)
+++|+|++||||||+++.|.+
T Consensus 3 ~i~i~G~~GsGKSTl~~~L~~ 23 (204)
T 2if2_A 3 RIGLTGNIGCGKSTVAQMFRE 23 (204)
T ss_dssp EEEEEECTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHH
Confidence 378999999999999999988
No 134
>2qnr_A Septin-2, protein NEDD5; structural genomics consortium, SGC, mitosis, GDP, C cycle, cell division, GTP-binding, nucleotide-binding; HET: GDP; 2.60A {Homo sapiens} PDB: 2qa5_A* 3ftq_A*
Probab=98.91 E-value=4.8e-10 Score=61.59 Aligned_cols=24 Identities=33% Similarity=0.195 Sum_probs=18.9
Q ss_pred eeEEcCCCCcHHHHHHHHHhh-hcc
Q 044571 2 EGLYGISCVGKTTLANFVGNQ-LRQ 25 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~-~~~ 25 (79)
++|+|+||+|||||++.|+|. ..+
T Consensus 21 I~lvG~nG~GKSTLl~~L~g~~~~~ 45 (301)
T 2qnr_A 21 LMVVGESGLGKSTLINSLFLTDLYP 45 (301)
T ss_dssp EEEEEETTSSHHHHHHHHHC-----
T ss_pred EEEECCCCCCHHHHHHHHhCCCccC
Confidence 589999999999999999986 443
No 135
>1nij_A Hypothetical protein YJIA; structural genomics, P-loop protein, GTP binding, structure function project, S2F, unknown function; 2.00A {Escherichia coli} SCOP: c.37.1.10 d.237.1.1
Probab=98.90 E-value=4.1e-10 Score=62.24 Aligned_cols=23 Identities=35% Similarity=0.338 Sum_probs=21.1
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhh
Q 044571 1 MEGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~ 23 (79)
+++|+|+||||||||++.+.+..
T Consensus 6 v~~i~G~~GaGKTTll~~l~~~~ 28 (318)
T 1nij_A 6 VTLLTGFLGAGKTTLLRHILNEQ 28 (318)
T ss_dssp EEEEEESSSSSCHHHHHHHHHSC
T ss_pred EEEEEecCCCCHHHHHHHHHhhc
Confidence 36899999999999999999986
No 136
>4aby_A DNA repair protein RECN; hydrolase, double strand break repair, ATPase, nucleotide binding domain; HET: DNA; 3.00A {Deinococcus radiodurans}
Probab=98.90 E-value=1.4e-10 Score=65.65 Aligned_cols=25 Identities=20% Similarity=0.295 Sum_probs=22.0
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQ 25 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~ 25 (79)
+++|+|+||||||||+++|+++...
T Consensus 62 ~~~lvG~NGaGKStLl~aI~~l~~~ 86 (415)
T 4aby_A 62 FCAFTGETGAGKSIIVDALGLLLGG 86 (415)
T ss_dssp EEEEEESHHHHHHHHTHHHHHHTTC
T ss_pred cEEEECCCCCCHHHHHHHHHHHhCC
Confidence 3689999999999999999888753
No 137
>1w1w_A Structural maintenance of chromosome 1; cohesin, chromosome segregation, cell adhesion, kleisin, MIT cell cycle; HET: ATG; 2.90A {Saccharomyces cerevisiae} SCOP: c.37.1.12
Probab=98.89 E-value=8.6e-10 Score=62.98 Aligned_cols=26 Identities=15% Similarity=0.265 Sum_probs=22.5
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhccc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQE 26 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~ 26 (79)
+++|+||||+||||++++|+++..+.
T Consensus 28 ~~~i~G~nG~GKstll~ai~~~~~~~ 53 (430)
T 1w1w_A 28 FTSIIGPNGSGKSNMMDAISFVLGVR 53 (430)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHTTC-
T ss_pred EEEEECCCCCCHHHHHHHHHhhhccc
Confidence 36899999999999999999987664
No 138
>2qag_C Septin-7; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=98.89 E-value=7.9e-10 Score=63.17 Aligned_cols=24 Identities=29% Similarity=0.058 Sum_probs=21.8
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhcc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLRQ 25 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~~ 25 (79)
++|+|+||+|||||+++++|...+
T Consensus 34 I~lvG~sGaGKSTLln~L~g~~~~ 57 (418)
T 2qag_C 34 LMVVGESGLGKSTLINSLFLTDLY 57 (418)
T ss_dssp EEEECCTTSSHHHHHHHHTTCCCC
T ss_pred EEEECCCCCcHHHHHHHHhCCCCC
Confidence 589999999999999999998763
No 139
>3t61_A Gluconokinase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium, nysgrc; 2.20A {Sinorhizobium meliloti}
Probab=98.89 E-value=1.3e-09 Score=56.48 Aligned_cols=23 Identities=17% Similarity=0.286 Sum_probs=20.6
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhh
Q 044571 1 MEGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~ 23 (79)
+++|+|++||||||+++.|.+.+
T Consensus 20 ~I~l~G~~GsGKSTla~~L~~~l 42 (202)
T 3t61_A 20 SIVVMGVSGSGKSSVGEAIAEAC 42 (202)
T ss_dssp CEEEECSTTSCHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHh
Confidence 47899999999999999998765
No 140
>2qt1_A Nicotinamide riboside kinase 1; non-protein kinase, NAD+, NRK1, nicotinic acid riboside kinase activity, NAD biosynthesis; HET: NNR; 1.32A {Homo sapiens} PDB: 2qsy_A* 2qsz_A* 2qt0_A* 2p0e_A* 2qg6_A* 2ql6_A*
Probab=98.89 E-value=8.2e-10 Score=57.47 Aligned_cols=23 Identities=39% Similarity=0.601 Sum_probs=20.9
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhh
Q 044571 1 MEGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~ 23 (79)
+++|+|++||||||+++.|.+.+
T Consensus 23 ~i~i~G~~GsGKSTl~~~L~~~~ 45 (207)
T 2qt1_A 23 IIGISGVTNSGKTTLAKNLQKHL 45 (207)
T ss_dssp EEEEEESTTSSHHHHHHHHHTTS
T ss_pred EEEEECCCCCCHHHHHHHHHHhc
Confidence 37899999999999999999875
No 141
>2f9l_A RAB11B, member RAS oncogene family; RAB11B GTPase, vesicle transport, hydrolase; HET: GDP; 1.55A {Homo sapiens} SCOP: c.37.1.8 PDB: 2f9m_A* 1yzk_A* 2hv8_A* 2gzd_A* 2gzh_A* 2d7c_A* 3bfk_A*
Probab=98.89 E-value=1.2e-09 Score=56.48 Aligned_cols=22 Identities=32% Similarity=0.214 Sum_probs=20.5
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|+||+|||||++.+.+..
T Consensus 8 v~lvG~~g~GKSTLl~~l~~~~ 29 (199)
T 2f9l_A 8 VVLIGDSGVGKSNLLSRFTRNE 29 (199)
T ss_dssp EEEESSTTSSHHHHHHHHHHSC
T ss_pred EEEECcCCCCHHHHHHHHhcCC
Confidence 6899999999999999999974
No 142
>1in4_A RUVB, holliday junction DNA helicase RUVB; AAA+-class ATPase, winged-helix domain, ATP hydrolysis, walker A, walker B, sensor 1, sensor 2; HET: ADP; 1.60A {Thermotoga maritima} SCOP: a.4.5.11 c.37.1.20 PDB: 1in5_A* 1in6_A* 1in8_A* 1in7_A* 1j7k_A*
Probab=98.88 E-value=1.4e-09 Score=60.42 Aligned_cols=22 Identities=41% Similarity=0.505 Sum_probs=20.8
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
+.|+||||+|||||++++++..
T Consensus 54 ~ll~Gp~G~GKTTLa~~ia~~l 75 (334)
T 1in4_A 54 VLLAGPPGLGKTTLAHIIASEL 75 (334)
T ss_dssp EEEESSTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCcHHHHHHHHHHHh
Confidence 6799999999999999999987
No 143
>1ewq_A DNA mismatch repair protein MUTS; multiple domains of protein, mostly mixed alpha-beta structures, one domain is entirely helical; HET: DNA; 2.20A {Thermus aquaticus} SCOP: a.113.1.1 c.37.1.12 c.55.6.1 d.75.2.1 PDB: 1nne_A* 1fw6_A* 1ewr_A*
Probab=98.88 E-value=9.1e-10 Score=66.76 Aligned_cols=24 Identities=17% Similarity=0.086 Sum_probs=21.7
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
+++|+||||+||||++|++.|+..
T Consensus 578 i~~I~GpNGsGKSTlLr~iagl~~ 601 (765)
T 1ewq_A 578 LVLITGPNMAGKSTFLRQTALIAL 601 (765)
T ss_dssp EEEEESCSSSSHHHHHHHHHHHHH
T ss_pred EEEEECCCCCChHHHHHHHHhhhh
Confidence 478999999999999999999864
No 144
>2w0m_A SSO2452; RECA, SSPF, unknown FUN; 2.0A {Sulfolobus solfataricus P2}
Probab=98.87 E-value=1e-09 Score=57.55 Aligned_cols=26 Identities=19% Similarity=0.129 Sum_probs=22.3
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhccc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQE 26 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~ 26 (79)
+++|+|+||+|||||++.+++...+.
T Consensus 25 ~~~i~G~~GsGKTtl~~~l~~~~~~~ 50 (235)
T 2w0m_A 25 FIALTGEPGTGKTIFSLHFIAKGLRD 50 (235)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHH
T ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHC
Confidence 36899999999999999999876543
No 145
>2qor_A Guanylate kinase; phosphotransferase, purine metabolism, structural genomics, structural genomics of pathogenic protozoa consortium; HET: 5GP POP; 1.80A {Plasmodium vivax}
Probab=98.86 E-value=1.9e-09 Score=56.12 Aligned_cols=24 Identities=33% Similarity=0.210 Sum_probs=21.0
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
+++|+|+|||||||+++.|....+
T Consensus 14 ~i~l~G~sGsGKsTl~~~L~~~~~ 37 (204)
T 2qor_A 14 PLVVCGPSGVGKGTLIKKVLSEFP 37 (204)
T ss_dssp CEEEECCTTSCHHHHHHHHHHHCT
T ss_pred EEEEECCCCCCHHHHHHHHHHhCc
Confidence 478999999999999999987663
No 146
>1ixz_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 2.20A {Thermus thermophilus} SCOP: c.37.1.20 PDB: 1iy0_A* 1iy1_A*
Probab=98.86 E-value=1.8e-09 Score=57.76 Aligned_cols=23 Identities=43% Similarity=0.411 Sum_probs=20.8
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
+.|+||||+|||||++++.+...
T Consensus 52 ~ll~G~~G~GKTtl~~~i~~~~~ 74 (254)
T 1ixz_A 52 VLLVGPPGVGKTHLARAVAGEAR 74 (254)
T ss_dssp EEEECCTTSSHHHHHHHHHHHTT
T ss_pred EEEECCCCCCHHHHHHHHHHHhC
Confidence 47899999999999999999864
No 147
>3cr8_A Sulfate adenylyltranferase, adenylylsulfate kinase; APS kinase, transferase, sulfate metabolism, nucleotide 2 kinase; 2.95A {Thiobacillus denitrificans}
Probab=98.85 E-value=7.4e-10 Score=65.13 Aligned_cols=26 Identities=31% Similarity=0.332 Sum_probs=23.3
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhccc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQE 26 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~ 26 (79)
+++|+|+|||||||++++|.+.+.+.
T Consensus 371 iI~LiG~sGSGKSTLar~La~~L~~~ 396 (552)
T 3cr8_A 371 TVFFTGLSGAGKSTLARALAARLMEM 396 (552)
T ss_dssp EEEEEESSCHHHHHHHHHHHHHHHTT
T ss_pred EEEEECCCCChHHHHHHHHHHhhccc
Confidence 36899999999999999999998764
No 148
>1wb9_A DNA mismatch repair protein MUTS; DNA-binding, ATP-binding, DNA binding, DNA repair, mismatch recognition; HET: DNA ADP; 2.10A {Escherichia coli} SCOP: a.113.1.1 c.37.1.12 c.55.6.1 d.75.2.1 PDB: 1wbb_A* 1e3m_A* 1oh5_A* 1oh6_A* 1oh7_A* 1oh8_A* 1w7a_A* 2wtu_A* 1wbd_A* 1ng9_A* 3k0s_A*
Probab=98.85 E-value=1.3e-09 Score=66.42 Aligned_cols=24 Identities=21% Similarity=0.025 Sum_probs=21.3
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
+++|+||||+||||++|++.+...
T Consensus 609 i~~ItGpNGsGKSTlLr~iagl~~ 632 (800)
T 1wb9_A 609 MLIITGPNMGGKSTYMRQTALIAL 632 (800)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHH
T ss_pred EEEEECCCCCChHHHHHHHHHHHH
Confidence 378999999999999999999753
No 149
>1f2t_A RAD50 ABC-ATPase; DNA double-strand break repair, replication; 1.60A {Pyrococcus furiosus} SCOP: c.37.1.12 PDB: 1f2u_A* 1us8_A*
Probab=98.84 E-value=1.6e-09 Score=54.14 Aligned_cols=20 Identities=20% Similarity=0.222 Sum_probs=18.0
Q ss_pred eeEEcCCCCcHHHHHHHHHh
Q 044571 2 EGLYGISCVGKTTLANFVGN 21 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g 21 (79)
.+|+||||+||||++.+|.-
T Consensus 26 ~~I~G~NGsGKStil~Ai~~ 45 (149)
T 1f2t_A 26 NLIIGQNGSGKSSLLDAILV 45 (149)
T ss_dssp EEEECCTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHH
Confidence 57999999999999999864
No 150
>3vaa_A Shikimate kinase, SK; structural genomics, center for structural genomics of infec diseases, csgid, metal binding, transferase; 1.70A {Bacteroides thetaiotaomicron}
Probab=98.84 E-value=1.8e-09 Score=55.98 Aligned_cols=22 Identities=36% Similarity=0.320 Sum_probs=19.9
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
+.|+|++||||||+++.|...+
T Consensus 28 i~l~G~~GsGKsTl~~~La~~l 49 (199)
T 3vaa_A 28 IFLTGYMGAGKTTLGKAFARKL 49 (199)
T ss_dssp EEEECCTTSCHHHHHHHHHHHH
T ss_pred EEEEcCCCCCHHHHHHHHHHHc
Confidence 6899999999999999998764
No 151
>1iy2_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 3.20A {Thermus thermophilus} SCOP: c.37.1.20
Probab=98.84 E-value=2.2e-09 Score=58.12 Aligned_cols=23 Identities=43% Similarity=0.411 Sum_probs=20.9
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
+.|+||||+|||||+++|.+...
T Consensus 76 vll~Gp~GtGKTtl~~~i~~~~~ 98 (278)
T 1iy2_A 76 VLLVGPPGVGKTHLARAVAGEAR 98 (278)
T ss_dssp EEEECCTTSSHHHHHHHHHHHTT
T ss_pred EEEECCCcChHHHHHHHHHHHcC
Confidence 57899999999999999999865
No 152
>1tf7_A KAIC; homohexamer, hexamer, circadian clock protein; HET: ATP; 2.80A {Synechococcus SP} SCOP: c.37.1.11 c.37.1.11 PDB: 3s1a_A* 1u9i_A* 2gbl_A* 3dvl_A* 3k0a_A* 3k09_A* 3jzm_A* 3k0e_A* 4dug_A* 3ua2_A* 3k0c_A* 3k0f_A*
Probab=98.84 E-value=3.7e-09 Score=61.75 Aligned_cols=39 Identities=18% Similarity=0.105 Sum_probs=30.7
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccCCCCcEEEEEecCCcc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEKIFDEVGIATVSQDPD 42 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~~~~~~~~~~v~q~~~ 42 (79)
+++|+|+||+|||||++.+++..++. ....+.+++|++.
T Consensus 283 i~~i~G~~GsGKSTLl~~l~g~~~~~---G~~vi~~~~ee~~ 321 (525)
T 1tf7_A 283 IILATGATGTGKTLLVSRFVENACAN---KERAILFAYEESR 321 (525)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHHTT---TCCEEEEESSSCH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHhC---CCCEEEEEEeCCH
Confidence 36899999999999999999998764 2234566788763
No 153
>2px0_A Flagellar biosynthesis protein FLHF; SRP GTPase, flagellum, protein transport, biosynthetic protein; HET: GNP; 3.00A {Bacillus subtilis} PDB: 2px3_A* 3syn_A*
Probab=98.83 E-value=3.9e-09 Score=57.97 Aligned_cols=38 Identities=29% Similarity=0.253 Sum_probs=29.1
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccCCCCcEEEEEecCCc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEKIFDEVGIATVSQDP 41 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~~~~~~~~~~v~q~~ 41 (79)
+++++|+||+||||++..+.+.+.++. +..+.++.+|+
T Consensus 107 vi~lvG~~GsGKTTl~~~LA~~l~~~~---G~~V~lv~~D~ 144 (296)
T 2px0_A 107 YIVLFGSTGAGKTTTLAKLAAISMLEK---HKKIAFITTDT 144 (296)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHTT---CCCEEEEECCC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHhc---CCEEEEEecCc
Confidence 478999999999999999999987632 23455566655
No 154
>1pui_A ENGB, probable GTP-binding protein ENGB; structural genomics, nysgxrc T16, GTPase, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.37.1.8
Probab=98.82 E-value=5.3e-10 Score=58.01 Aligned_cols=22 Identities=32% Similarity=0.308 Sum_probs=20.1
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|+||+|||||++.+.|..
T Consensus 29 v~lvG~~g~GKSTLl~~l~g~~ 50 (210)
T 1pui_A 29 VAFAGRSNAGKSSALNTLTNQK 50 (210)
T ss_dssp EEEEECTTSSHHHHHTTTCCC-
T ss_pred EEEECCCCCCHHHHHHHHhCCC
Confidence 7899999999999999999886
No 155
>2o5v_A DNA replication and repair protein RECF; ABC ATPase, walker A motif, P-loop, signature motif, replication/recombination complex; HET: DNA; 1.61A {Deinococcus radiodurans}
Probab=98.81 E-value=2.4e-09 Score=60.15 Aligned_cols=22 Identities=32% Similarity=0.436 Sum_probs=19.8
Q ss_pred CeeEEcCCCCcHHHHHHHHHhh
Q 044571 1 MEGLYGISCVGKTTLANFVGNQ 22 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~ 22 (79)
+.+|+||||+||||++++|+++
T Consensus 28 ~~~i~G~nG~GKttll~ai~~~ 49 (359)
T 2o5v_A 28 VTGIYGENGAGKTNLLEAAYLA 49 (359)
T ss_dssp EEEEECCTTSSHHHHHHHHHHH
T ss_pred eEEEECCCCCChhHHHHHHHHh
Confidence 3689999999999999999973
No 156
>3qf7_A RAD50; ABC-ATPase, ATPase, hydrolase; HET: ANP; 1.90A {Thermotoga maritima} PDB: 3qg5_A 3tho_A*
Probab=98.80 E-value=2.5e-09 Score=60.14 Aligned_cols=21 Identities=19% Similarity=0.192 Sum_probs=18.8
Q ss_pred eeEEcCCCCcHHHHHHHHHhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQ 22 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~ 22 (79)
.+|+||||||||||+.+|+..
T Consensus 26 ~~i~G~NGaGKTTll~ai~~a 46 (365)
T 3qf7_A 26 TVVEGPNGAGKSSLFEAISFA 46 (365)
T ss_dssp EEEECCTTSSHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHH
Confidence 579999999999999999854
No 157
>2pez_A Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthetase 1 (PAPS synthetase...; NMP-kinase fold, protein in complex with nucleic acid; HET: GGZ DAT; 1.40A {Homo sapiens} PDB: 2pey_A* 2ax4_A*
Probab=98.80 E-value=2.4e-09 Score=54.56 Aligned_cols=25 Identities=32% Similarity=0.246 Sum_probs=21.7
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQ 25 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~ 25 (79)
+++|+|++||||||+++.+.+.+++
T Consensus 7 ~i~l~G~~GsGKST~~~~L~~~l~~ 31 (179)
T 2pez_A 7 TVWLTGLSGAGKTTVSMALEEYLVC 31 (179)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHhh
Confidence 3689999999999999999987643
No 158
>2o8b_B DNA mismatch repair protein MSH6; DNA damage response, somatic hypermutat protein-DNA complex, DNA mispair, cancer; HET: DNA ADP; 2.75A {Homo sapiens} PDB: 2o8c_B* 2o8d_B* 2o8e_B* 2o8f_B*
Probab=98.80 E-value=1.8e-09 Score=67.09 Aligned_cols=24 Identities=25% Similarity=0.127 Sum_probs=21.4
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQ 25 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~ 25 (79)
+++|+||||+||||++|++ |++.+
T Consensus 791 i~~ItGpNgsGKSTlLr~i-Gl~~~ 814 (1022)
T 2o8b_B 791 CVLVTGPNMGGKSTLMRQA-GLLAV 814 (1022)
T ss_dssp EEEEECCTTSSHHHHHHHH-HHHHH
T ss_pred EEEEECCCCCChHHHHHHH-HHHHH
Confidence 3689999999999999999 98765
No 159
>3kb2_A SPBC2 prophage-derived uncharacterized protein YORR; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: G3D; 2.20A {Bacillus subtilis} SCOP: c.37.1.1 PDB: 2axp_A*
Probab=98.80 E-value=3.2e-09 Score=53.54 Aligned_cols=24 Identities=29% Similarity=0.375 Sum_probs=20.6
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
+++|+|++||||||+++.+...+.
T Consensus 3 ~i~l~G~~GsGKsT~~~~L~~~l~ 26 (173)
T 3kb2_A 3 LIILEGPDCCFKSTVAAKLSKELK 26 (173)
T ss_dssp EEEEECSSSSSHHHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHHHhC
Confidence 378999999999999999987643
No 160
>1nlf_A Regulatory protein REPA; replicative DNA helicase structural changes, replication; 1.95A {Escherichia coli} SCOP: c.37.1.11 PDB: 1g8y_A 1olo_A
Probab=98.79 E-value=1.7e-08 Score=54.73 Aligned_cols=25 Identities=24% Similarity=0.240 Sum_probs=21.6
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQ 25 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~ 25 (79)
+++|+|+||+|||||++.+.+....
T Consensus 32 i~~i~G~~GsGKTtl~~~l~~~~~~ 56 (279)
T 1nlf_A 32 VGALVSPGGAGKSMLALQLAAQIAG 56 (279)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHT
T ss_pred EEEEEcCCCCCHHHHHHHHHHHHhc
Confidence 3689999999999999999986653
No 161
>3ux8_A Excinuclease ABC, A subunit; UVRA, nucleotide excision repair, DNA repair, ABC ATPase, DN binding protein; HET: ADP; 2.10A {Geobacillus}
Probab=98.79 E-value=1e-09 Score=65.59 Aligned_cols=20 Identities=40% Similarity=0.431 Sum_probs=17.6
Q ss_pred CeeEEcCCCCcHHHHHHHHH
Q 044571 1 MEGLYGISCVGKTTLANFVG 20 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~ 20 (79)
+++|+||||||||||+++|.
T Consensus 350 ~vaIiGpnGsGKSTLl~~i~ 369 (670)
T 3ux8_A 350 FVAVTGVSGSGKSTLVNEVL 369 (670)
T ss_dssp EEEEECSTTSSHHHHHTTTH
T ss_pred EEEEEeeCCCCHHHHHHHHH
Confidence 47999999999999998764
No 162
>3nwj_A ATSK2; P loop, shikimate, nucleoside monophosphate kinase, shikimat ATP binding, chloroplast, transferase; 2.35A {Arabidopsis thaliana}
Probab=98.79 E-value=4.5e-09 Score=56.53 Aligned_cols=24 Identities=29% Similarity=0.345 Sum_probs=21.0
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
+++|+|++||||||+++.|.+.+.
T Consensus 50 ~i~l~G~~GsGKSTl~~~La~~lg 73 (250)
T 3nwj_A 50 SMYLVGMMGSGKTTVGKIMARSLG 73 (250)
T ss_dssp CEEEECSTTSCHHHHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHHhcC
Confidence 478999999999999999988543
No 163
>1np6_A Molybdopterin-guanine dinucleotide biosynthesis protein B; mixed alpha-beta fold, elongated beta-sheet, walker A motif, P-loop structural motif; 1.90A {Escherichia coli} SCOP: c.37.1.10 PDB: 1p9n_A
Probab=98.77 E-value=4.1e-09 Score=53.97 Aligned_cols=25 Identities=28% Similarity=0.163 Sum_probs=21.7
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQ 25 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~ 25 (79)
+++|+|++|||||||++.+.+.++.
T Consensus 8 ~i~i~G~sGsGKTTl~~~l~~~l~~ 32 (174)
T 1np6_A 8 LLAFAAWSGTGKTTLLKKLIPALCA 32 (174)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHhccc
Confidence 3689999999999999999987654
No 164
>3thx_B DNA mismatch repair protein MSH3; ABC family ATPase, mismatch recognition, mismatched unpaired DNA binding protein-DNA complex; HET: DNA ADP; 2.70A {Homo sapiens} PDB: 3thw_B* 3thy_B* 3thz_B*
Probab=98.75 E-value=2.6e-09 Score=65.86 Aligned_cols=22 Identities=18% Similarity=0.092 Sum_probs=19.6
Q ss_pred CeeEEcCCCCcHHHHHHHHHhh
Q 044571 1 MEGLYGISCVGKTTLANFVGNQ 22 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~ 22 (79)
+++|+||||+||||++|++.+.
T Consensus 675 i~~ItGPNGaGKSTlLr~i~~i 696 (918)
T 3thx_B 675 VMIITGPNMGGKSSYIKQVALI 696 (918)
T ss_dssp EEEEESCCCHHHHHHHHHHHHH
T ss_pred EEEEECCCCCchHHHHHHHHHH
Confidence 4789999999999999998765
No 165
>1ex7_A Guanylate kinase; substrate-induced FIT, domain movement, GMP, ATP, substrate specificity, X-RAY diffraction, transferase; HET: 5GP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1ex6_A* 1gky_A* 3sqk_A 4f4j_A
Probab=98.75 E-value=6.5e-09 Score=53.76 Aligned_cols=22 Identities=27% Similarity=0.172 Sum_probs=19.4
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
+.|+||||+|||||++.+....
T Consensus 4 IVi~GPSG~GK~Tl~~~L~~~~ 25 (186)
T 1ex7_A 4 IVISGPSGTGKSTLLKKLFAEY 25 (186)
T ss_dssp EEEECCTTSSHHHHHHHHHHHC
T ss_pred EEEECCCCCCHHHHHHHHHHhC
Confidence 6799999999999999987654
No 166
>1vma_A Cell division protein FTSY; TM0570, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics; HET: CIT; 1.60A {Thermotoga maritima} SCOP: a.24.13.1 c.37.1.10
Probab=98.75 E-value=4.4e-09 Score=58.00 Aligned_cols=26 Identities=23% Similarity=0.279 Sum_probs=23.4
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhccc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQE 26 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~ 26 (79)
+++|+|+||+||||++..+++.+.+.
T Consensus 106 vi~ivG~~GsGKTTl~~~LA~~l~~~ 131 (306)
T 1vma_A 106 VIMVVGVNGTGKTTSCGKLAKMFVDE 131 (306)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHHT
T ss_pred EEEEEcCCCChHHHHHHHHHHHHHhc
Confidence 47899999999999999999998764
No 167
>2www_A Methylmalonic aciduria type A protein, mitochondrial; transport protein, nucleotide-binding; HET: GDP 2PE; 2.64A {Homo sapiens}
Probab=98.74 E-value=4.7e-09 Score=58.73 Aligned_cols=25 Identities=32% Similarity=0.542 Sum_probs=22.1
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQ 25 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~ 25 (79)
+++|+|++|+|||||++.+.+...+
T Consensus 76 ~v~lvG~pgaGKSTLln~L~~~~~~ 100 (349)
T 2www_A 76 RVGLSGPPGAGKSTFIEYFGKMLTE 100 (349)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHH
T ss_pred EEEEEcCCCCCHHHHHHHHHHHhhh
Confidence 3789999999999999999987654
No 168
>1pzn_A RAD51, DNA repair and recombination protein RAD51, RADA; heptameric ring, heptamer, ring, oligomer, RAD51 polymerizat motif; HET: DNA; 2.85A {Pyrococcus furiosus} SCOP: a.60.4.1 c.37.1.11
Probab=98.73 E-value=6.2e-09 Score=58.28 Aligned_cols=23 Identities=26% Similarity=0.366 Sum_probs=21.2
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhh
Q 044571 1 MEGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~ 23 (79)
+++|+||||||||||++.+++..
T Consensus 133 i~~I~G~~GsGKTTL~~~l~~~~ 155 (349)
T 1pzn_A 133 ITEVFGEFGSGKTQLAHTLAVMV 155 (349)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHHHh
Confidence 36899999999999999999987
No 169
>3lw7_A Adenylate kinase related protein (ADKA-like); AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 2.30A {Sulfolobus solfataricus} PDB: 3h0k_A
Probab=98.73 E-value=5.7e-09 Score=52.55 Aligned_cols=19 Identities=21% Similarity=0.389 Sum_probs=17.6
Q ss_pred CeeEEcCCCCcHHHHHHHH
Q 044571 1 MEGLYGISCVGKTTLANFV 19 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i 19 (79)
+++|+|++||||||+++.+
T Consensus 3 ~I~l~G~~GsGKsT~a~~L 21 (179)
T 3lw7_A 3 VILITGMPGSGKSEFAKLL 21 (179)
T ss_dssp EEEEECCTTSCHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHH
Confidence 4789999999999999999
No 170
>1n0w_A DNA repair protein RAD51 homolog 1; DNA repair, homologous recombination, breast cancer susceptibility, RECA-like ATPase, protein complex; HET: DNA MSE; 1.70A {Homo sapiens} SCOP: c.37.1.11
Probab=98.73 E-value=6.4e-09 Score=54.98 Aligned_cols=22 Identities=18% Similarity=0.351 Sum_probs=19.9
Q ss_pred CeeEEcCCCCcHHHHHHHHHhh
Q 044571 1 MEGLYGISCVGKTTLANFVGNQ 22 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~ 22 (79)
+++|+||||+|||||++.+++.
T Consensus 26 ~~~i~G~~GsGKTtl~~~l~~~ 47 (243)
T 1n0w_A 26 ITEMFGEFRTGKTQICHTLAVT 47 (243)
T ss_dssp EEEEECCTTSSHHHHHHHHHHH
T ss_pred EEEEECCCCCcHHHHHHHHHHH
Confidence 3689999999999999999994
No 171
>1svm_A Large T antigen; AAA+ fold, viral protein; HET: ATP; 1.94A {Simian virus 40} SCOP: c.37.1.20 PDB: 1svl_A* 1svo_A 1n25_A 2h1l_A
Probab=98.73 E-value=6.4e-09 Score=58.81 Aligned_cols=24 Identities=29% Similarity=0.028 Sum_probs=21.2
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
+++|+||+|+|||||++++.+...
T Consensus 171 ~i~l~G~~GsGKSTl~~~l~~~~~ 194 (377)
T 1svm_A 171 YWLFKGPIDSGKTTLAAALLELCG 194 (377)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHhhcC
Confidence 368999999999999999998753
No 172
>3thx_A DNA mismatch repair protein MSH2; ABC family ATPase, mismatch recognition, mismatched unpaired DNA binding protein-DNA complex; HET: DNA ADP; 2.70A {Homo sapiens} PDB: 2o8c_A* 2o8d_A* 2o8f_A* 3thw_A* 2o8b_A* 3thy_A* 3thz_A* 2o8e_A*
Probab=98.72 E-value=5.4e-09 Score=64.57 Aligned_cols=19 Identities=21% Similarity=0.174 Sum_probs=17.7
Q ss_pred CeeEEcCCCCcHHHHHHHH
Q 044571 1 MEGLYGISCVGKTTLANFV 19 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i 19 (79)
+++|+||||+||||++|++
T Consensus 664 i~~ItGpNGsGKSTlLr~i 682 (934)
T 3thx_A 664 FHIITGPNMGGKSTYIRQT 682 (934)
T ss_dssp EEEEECCTTSSHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHH
Confidence 3789999999999999999
No 173
>3qkt_A DNA double-strand break repair RAD50 ATPase; RECA-like fold, coiled-coils, ATP binding, DNA bindi MRE11, replication; HET: DNA ANP; 1.90A {Pyrococcus furiosus} PDB: 3qku_A* 1ii8_A 3qks_B* 3qkr_B* 1ii8_B
Probab=98.72 E-value=6e-09 Score=58.02 Aligned_cols=20 Identities=20% Similarity=0.222 Sum_probs=17.6
Q ss_pred eeEEcCCCCcHHHHHHHHHh
Q 044571 2 EGLYGISCVGKTTLANFVGN 21 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g 21 (79)
.+|+||||+||||++.+|+-
T Consensus 26 ~~i~G~NGsGKS~lleAi~~ 45 (339)
T 3qkt_A 26 NLIIGQNGSGKSSLLDAILV 45 (339)
T ss_dssp EEEECCTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHH
Confidence 57999999999999998743
No 174
>2wji_A Ferrous iron transport protein B homolog; membrane G-proteins, cell membrane, ION transport, transmembrane; HET: GNP; 1.90A {Methanocaldococcus jannaschii} PDB: 2wjj_A* 2wjh_A*
Probab=98.72 E-value=8e-09 Score=51.91 Aligned_cols=22 Identities=32% Similarity=0.342 Sum_probs=20.1
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|++|+|||||++.+.+..
T Consensus 6 v~lvG~~gvGKStL~~~l~~~~ 27 (165)
T 2wji_A 6 IALIGNPNVGKSTIFNALTGEN 27 (165)
T ss_dssp EEEECSTTSSHHHHHHHHHCCS
T ss_pred EEEECCCCCCHHHHHHHHhCCC
Confidence 6899999999999999999854
No 175
>1e69_A Chromosome segregation SMC protein; structural maintenance of chromosomes, coiled coil; 3.1A {Thermotoga maritima} SCOP: c.37.1.12
Probab=98.72 E-value=3.4e-09 Score=58.61 Aligned_cols=23 Identities=13% Similarity=0.266 Sum_probs=20.2
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhh
Q 044571 1 MEGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~ 23 (79)
+.+|+|+||||||||+.+|+.+.
T Consensus 26 ~~~i~G~NGsGKS~ll~ai~~ll 48 (322)
T 1e69_A 26 VTAIVGPNGSGKSNIIDAIKWVF 48 (322)
T ss_dssp EEEEECCTTTCSTHHHHHHHHTS
T ss_pred cEEEECCCCCcHHHHHHHHHHHh
Confidence 36899999999999999998654
No 176
>1via_A Shikimate kinase; structural genomics, transferase; HET: MSE; 1.57A {Campylobacter jejuni} SCOP: c.37.1.2
Probab=98.72 E-value=1.1e-08 Score=51.96 Aligned_cols=23 Identities=30% Similarity=0.355 Sum_probs=20.3
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
+.|+|++||||||+++.|...+.
T Consensus 7 i~i~G~~GsGKsTla~~La~~l~ 29 (175)
T 1via_A 7 IVFIGFMGSGKSTLARALAKDLD 29 (175)
T ss_dssp EEEECCTTSCHHHHHHHHHHHHT
T ss_pred EEEEcCCCCCHHHHHHHHHHHcC
Confidence 68999999999999999987643
No 177
>1qhx_A CPT, protein (chloramphenicol phosphotransferase); kinase, antibiotic resistance, phosphorylation, mononucleoti binding fold; HET: ATP; 2.50A {Streptomyces venezuelae} SCOP: c.37.1.3 PDB: 1grr_A* 1grq_A 1qhs_A* 1qhn_A* 1qhy_A*
Probab=98.71 E-value=8.2e-09 Score=52.42 Aligned_cols=22 Identities=27% Similarity=0.255 Sum_probs=19.7
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
+.|+|++||||||+++.+...+
T Consensus 6 i~l~G~~GsGKST~a~~La~~l 27 (178)
T 1qhx_A 6 IILNGGSSAGKSGIVRCLQSVL 27 (178)
T ss_dssp EEEECCTTSSHHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHHhc
Confidence 6789999999999999998764
No 178
>2ze6_A Isopentenyl transferase; crown GALL tumor, cytokinin biosynthesis; HET: DST AMP; 2.10A {Agrobacterium tumefaciens} PDB: 2ze5_A* 2ze7_A* 2ze8_A
Probab=98.71 E-value=7.9e-09 Score=55.52 Aligned_cols=23 Identities=30% Similarity=0.557 Sum_probs=20.2
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
+.|+|++||||||+++.|.....
T Consensus 4 i~I~G~~GSGKSTla~~La~~~~ 26 (253)
T 2ze6_A 4 HLIYGPTCSGKTDMAIQIAQETG 26 (253)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHC
T ss_pred EEEECCCCcCHHHHHHHHHhcCC
Confidence 68999999999999999987643
No 179
>3qks_A DNA double-strand break repair RAD50 ATPase; RECA-like fold, coiled-coils, ATPase, exonuclease, endonucle binding, DNA binding; HET: DNA; 2.10A {Pyrococcus furiosus} PDB: 3qkr_A*
Probab=98.70 E-value=8.3e-09 Score=53.86 Aligned_cols=20 Identities=20% Similarity=0.222 Sum_probs=17.6
Q ss_pred eeEEcCCCCcHHHHHHHHHh
Q 044571 2 EGLYGISCVGKTTLANFVGN 21 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g 21 (79)
.+|+||||+||||++.+|.-
T Consensus 26 ~~I~G~NgsGKStil~ai~~ 45 (203)
T 3qks_A 26 NLIIGQNGSGKSSLLDAILV 45 (203)
T ss_dssp EEEECCTTSSHHHHHHHHHH
T ss_pred EEEEcCCCCCHHHHHHHHHH
Confidence 57999999999999998753
No 180
>2jaq_A Deoxyguanosine kinase; transferase, deoxyribonucleoside kinase; HET: DCP; 2.3A {Mycoplasma mycoides subsp} PDB: 2jat_A* 2jas_A*
Probab=98.70 E-value=9.5e-09 Score=53.04 Aligned_cols=23 Identities=22% Similarity=0.446 Sum_probs=20.4
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhh
Q 044571 1 MEGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~ 23 (79)
+++|+|++||||||+++.|...+
T Consensus 2 ~I~i~G~~GsGKsT~~~~L~~~l 24 (205)
T 2jaq_A 2 KIAIFGTVGAGKSTISAEISKKL 24 (205)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHH
T ss_pred EEEEECCCccCHHHHHHHHHHhc
Confidence 37899999999999999998854
No 181
>1ni3_A YCHF GTPase, YCHF GTP-binding protein; structural genomics, GTP1OBG, PSI, protein structure initiative; 2.80A {Schizosaccharomyces pombe} SCOP: c.37.1.8 d.15.10.2
Probab=98.68 E-value=1e-08 Score=58.21 Aligned_cols=21 Identities=29% Similarity=0.537 Sum_probs=19.8
Q ss_pred eeEEcCCCCcHHHHHHHHHhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQ 22 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~ 22 (79)
++|+|+||+|||||+++|+|.
T Consensus 23 vgiVG~pnaGKSTL~n~Ltg~ 43 (392)
T 1ni3_A 23 TGIVGMPNVGKSTFFRAITKS 43 (392)
T ss_dssp EEEEECSSSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHCC
Confidence 789999999999999999994
No 182
>2cvh_A DNA repair and recombination protein RADB; filament formation, homologous recombination, ATPase domain, hyperthermophIle; HET: DNA; 2.20A {Thermococcus kodakarensis} PDB: 2cvf_A*
Probab=98.68 E-value=1.1e-08 Score=53.35 Aligned_cols=21 Identities=43% Similarity=0.510 Sum_probs=19.3
Q ss_pred CeeEEcCCCCcHHHHHHHHHh
Q 044571 1 MEGLYGISCVGKTTLANFVGN 21 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g 21 (79)
+++|+|+||+|||||++.+++
T Consensus 22 ~~~i~G~~GsGKTtl~~~l~~ 42 (220)
T 2cvh_A 22 LTQVYGPYASGKTTLALQTGL 42 (220)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHH
Confidence 368999999999999999998
No 183
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A*
Probab=98.68 E-value=2.3e-08 Score=62.78 Aligned_cols=53 Identities=19% Similarity=-0.037 Sum_probs=40.4
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcccCCCCc-EEEEEecCCccHHHHHHHHHHH
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQEKIFDE-VGIATVSQDPDIIKVQGELAKS 53 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~~~~~~-~~~~~v~q~~~~~~v~~~i~~~ 53 (79)
+++|+|++|+|||||++.++........|+. ..|..+.+.++...+...+...
T Consensus 152 VV~IvGmGGIGKTTLAk~Vy~d~rV~~~Fd~gV~WVsVs~~~d~~~IL~~Ll~l 205 (1221)
T 1vt4_I 152 NVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKL 205 (1221)
T ss_dssp EEEECCSTTSSHHHHHHHHHHHCHHHHHHSSCEEEEECCCSSSHHHHHHHHHHH
T ss_pred EEEEEcCCCccHHHHHHHHHHhhHHHHhCCCcEEEEEeCCCCCHHHHHHHHHHH
Confidence 4789999999999999999865433344664 7899999988766666665553
No 184
>1vht_A Dephospho-COA kinase; structural genomics, transferase; HET: BA3; 1.59A {Escherichia coli} SCOP: c.37.1.1 PDB: 1vhl_A* 1viy_A 1t3h_A 1n3b_A
Probab=98.67 E-value=1.2e-08 Score=53.48 Aligned_cols=21 Identities=33% Similarity=0.363 Sum_probs=19.3
Q ss_pred CeeEEcCCCCcHHHHHHHHHh
Q 044571 1 MEGLYGISCVGKTTLANFVGN 21 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g 21 (79)
+++|+|++||||||+++.+..
T Consensus 6 ~I~i~G~~GSGKST~~~~L~~ 26 (218)
T 1vht_A 6 IVALTGGIGSGKSTVANAFAD 26 (218)
T ss_dssp EEEEECCTTSCHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHH
Confidence 478999999999999999976
No 185
>1gtv_A TMK, thymidylate kinase; transferase, transferase (ATP:TMP phosphotransferase); HET: TYD TMP; 1.55A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1g3u_A* 1gsi_A* 1mrn_A* 1mrs_A* 1n5i_A* 1n5j_A* 1n5k_A* 1n5l_A* 1w2g_A* 1w2h_A*
Probab=98.67 E-value=3.4e-09 Score=55.19 Aligned_cols=25 Identities=24% Similarity=0.424 Sum_probs=21.7
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQ 25 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~ 25 (79)
+++|.|++||||||+++.|...+..
T Consensus 2 ~I~i~G~~GsGKsTl~~~L~~~l~~ 26 (214)
T 1gtv_A 2 LIAIEGVDGAGKRTLVEKLSGAFRA 26 (214)
T ss_dssp EEEEEEEEEEEHHHHHHHHHHHHHE
T ss_pred EEEEEcCCCCCHHHHHHHHHHHHHh
Confidence 4789999999999999999887643
No 186
>3r20_A Cytidylate kinase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ADP, DCMP, D transferase; 2.00A {Mycobacterium smegmatis} SCOP: c.37.1.0 PDB: 3r8c_A 4die_A*
Probab=98.67 E-value=1.3e-08 Score=54.29 Aligned_cols=22 Identities=18% Similarity=0.273 Sum_probs=19.7
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|.||+||||||+++.|...+
T Consensus 12 i~i~G~~GsGKsTla~~la~~l 33 (233)
T 3r20_A 12 VAVDGPAGTGKSSVSRGLARAL 33 (233)
T ss_dssp EEEECCTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHh
Confidence 7899999999999999998554
No 187
>3cm0_A Adenylate kinase; ATP-binding, cytoplasm, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics; 1.80A {Thermus thermophilus}
Probab=98.66 E-value=1.4e-08 Score=51.85 Aligned_cols=21 Identities=24% Similarity=0.200 Sum_probs=18.9
Q ss_pred eeEEcCCCCcHHHHHHHHHhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQ 22 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~ 22 (79)
++|+|++||||||+++.+...
T Consensus 7 I~l~G~~GsGKST~~~~La~~ 27 (186)
T 3cm0_A 7 VIFLGPPGAGKGTQASRLAQE 27 (186)
T ss_dssp EEEECCTTSCHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHH
Confidence 689999999999999999753
No 188
>2zej_A Dardarin, leucine-rich repeat kinase 2; parkinson'S disease, LRRK2, ROC, GTPase, ROCO, ATP-B disease mutation, GTP-binding, GTPase activation; HET: GDP; 2.00A {Homo sapiens} PDB: 3d6t_B*
Probab=98.66 E-value=1.3e-08 Score=51.97 Aligned_cols=21 Identities=29% Similarity=0.200 Sum_probs=19.6
Q ss_pred eeEEcCCCCcHHHHHHHHHhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQ 22 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~ 22 (79)
++|+|++|+|||||++.+.+.
T Consensus 5 v~ivG~~gvGKStLl~~l~~~ 25 (184)
T 2zej_A 5 LMIVGNTGSGKTTLLQQLMKT 25 (184)
T ss_dssp EEEESCTTSSHHHHHHHHTCC
T ss_pred EEEECCCCCCHHHHHHHHhcC
Confidence 689999999999999999885
No 189
>2yvu_A Probable adenylyl-sulfate kinase; transferase, structural genomics, NPPSFA, national P protein structural and functional analyses; 2.10A {Aeropyrum pernix}
Probab=98.66 E-value=1.4e-08 Score=52.01 Aligned_cols=25 Identities=32% Similarity=0.425 Sum_probs=21.8
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQ 25 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~ 25 (79)
++.|+|++||||||+++.+...+..
T Consensus 15 ~i~l~G~~GsGKsT~~~~L~~~l~~ 39 (186)
T 2yvu_A 15 VVWLTGLPGSGKTTIATRLADLLQK 39 (186)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHH
T ss_pred EEEEEcCCCCCHHHHHHHHHHHHHh
Confidence 3679999999999999999887654
No 190
>2wjg_A FEOB, ferrous iron transport protein B homolog; membrane G-proteins, cell membrane, ION transport, transmembrane; HET: GDP; 2.20A {Methanocaldococcus jannaschii}
Probab=98.66 E-value=1.8e-08 Score=51.35 Aligned_cols=21 Identities=33% Similarity=0.406 Sum_probs=19.6
Q ss_pred eeEEcCCCCcHHHHHHHHHhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQ 22 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~ 22 (79)
++++|++|+|||||++.+.+.
T Consensus 10 i~lvG~~gvGKStL~~~l~~~ 30 (188)
T 2wjg_A 10 IALIGNPNVGKSTIFNALTGE 30 (188)
T ss_dssp EEEECSTTSSHHHHHHHHHTT
T ss_pred EEEECCCCCCHHHHHHHHhCC
Confidence 689999999999999999985
No 191
>2gj8_A MNME, tRNA modification GTPase TRME; G-domain dimer, alpha-beta-sandwich, hydrolase; HET: GDP; 1.70A {Escherichia coli BL21} SCOP: c.37.1.8 PDB: 2gj9_A* 2gja_A* 1rfl_A
Probab=98.64 E-value=1.8e-08 Score=51.00 Aligned_cols=22 Identities=23% Similarity=0.256 Sum_probs=20.3
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|++|+|||||++.+.+..
T Consensus 7 i~ivG~~g~GKStLl~~l~~~~ 28 (172)
T 2gj8_A 7 VVIAGRPNAGKSSLLNALAGRE 28 (172)
T ss_dssp EEEEESTTSSHHHHHHHHHTSC
T ss_pred EEEECCCCCCHHHHHHHHhCCC
Confidence 6899999999999999999864
No 192
>1uf9_A TT1252 protein; P-loop, nucleotide binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ATP; 2.80A {Thermus thermophilus} SCOP: c.37.1.1
Probab=98.64 E-value=1.5e-08 Score=52.27 Aligned_cols=22 Identities=27% Similarity=0.380 Sum_probs=19.9
Q ss_pred CeeEEcCCCCcHHHHHHHHHhh
Q 044571 1 MEGLYGISCVGKTTLANFVGNQ 22 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~ 22 (79)
+++|+|++||||||+++.+...
T Consensus 10 ~I~i~G~~GsGKST~~~~La~~ 31 (203)
T 1uf9_A 10 IIGITGNIGSGKSTVAALLRSW 31 (203)
T ss_dssp EEEEEECTTSCHHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHHC
Confidence 3789999999999999999875
No 193
>1ly1_A Polynucleotide kinase; PNK, phosphatase, transferase; 2.00A {Enterobacteria phage T4} SCOP: c.37.1.1
Probab=98.63 E-value=1.8e-08 Score=51.05 Aligned_cols=20 Identities=25% Similarity=0.019 Sum_probs=18.6
Q ss_pred eeEEcCCCCcHHHHHHHHHh
Q 044571 2 EGLYGISCVGKTTLANFVGN 21 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g 21 (79)
+.|+|++||||||+++.+..
T Consensus 5 I~i~G~~GsGKST~a~~L~~ 24 (181)
T 1ly1_A 5 ILTIGCPGSGKSTWAREFIA 24 (181)
T ss_dssp EEEECCTTSSHHHHHHHHHH
T ss_pred EEEecCCCCCHHHHHHHHHh
Confidence 67899999999999999986
No 194
>1m7g_A Adenylylsulfate kinase; APS kinase, transferase, sulfate Met nucleotide 2 kinase; HET: AV2 ADX ADP; 1.43A {Penicillium chrysogenum} SCOP: c.37.1.4 PDB: 1d6j_A* 1m7h_A* 3cr7_A*
Probab=98.63 E-value=1.9e-08 Score=52.56 Aligned_cols=24 Identities=42% Similarity=0.375 Sum_probs=21.5
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
++.|+|++||||||+++.|.+.+.
T Consensus 27 ~i~~~G~~GsGKsT~~~~l~~~l~ 50 (211)
T 1m7g_A 27 TIWLTGLSASGKSTLAVELEHQLV 50 (211)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHhc
Confidence 367999999999999999998776
No 195
>1ega_A Protein (GTP-binding protein ERA); GTPase, RNA-binding, RAS-like, hydrolase; 2.40A {Escherichia coli} SCOP: c.37.1.8 d.52.3.1 PDB: 1x1l_X 3ieu_A* 1x18_X
Probab=98.63 E-value=1.7e-08 Score=55.46 Aligned_cols=23 Identities=35% Similarity=0.332 Sum_probs=20.9
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhh
Q 044571 1 MEGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~ 23 (79)
+++|+|++|+|||||++.+.+..
T Consensus 10 ~VaIvG~~nvGKSTLln~L~g~~ 32 (301)
T 1ega_A 10 FIAIVGRPNVGKSTLLNKLLGQK 32 (301)
T ss_dssp EEEEECSSSSSHHHHHHHHHTCS
T ss_pred EEEEECCCCCCHHHHHHHHHCCC
Confidence 37899999999999999999874
No 196
>1kht_A Adenylate kinase; phosphotransferase, signaling protein, transferase; HET: AMP; 2.50A {Methanococcus voltae} SCOP: c.37.1.1 PDB: 3h86_B* 1ki9_A
Probab=98.63 E-value=2.1e-08 Score=51.26 Aligned_cols=24 Identities=29% Similarity=0.410 Sum_probs=20.5
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
++.|.|++||||||+++.|...+.
T Consensus 5 ~I~i~G~~GsGKsT~~~~L~~~l~ 28 (192)
T 1kht_A 5 VVVVTGVPGVGSTTSSQLAMDNLR 28 (192)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHH
Confidence 368999999999999999977544
No 197
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10
Probab=98.62 E-value=2e-08 Score=51.25 Aligned_cols=25 Identities=24% Similarity=0.113 Sum_probs=21.5
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQ 25 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~ 25 (79)
+++|+|++||||||++..+...+..
T Consensus 6 ~i~i~G~sGsGKTTl~~~L~~~l~~ 30 (169)
T 1xjc_A 6 VWQVVGYKHSGKTTLMEKWVAAAVR 30 (169)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHhhHh
Confidence 3689999999999999999887654
No 198
>1lv7_A FTSH; alpha/beta domain, four helix bundle, hydrolase; 1.50A {Escherichia coli} SCOP: c.37.1.20
Probab=98.62 E-value=2.5e-08 Score=53.38 Aligned_cols=23 Identities=26% Similarity=0.304 Sum_probs=20.6
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
+.|+||+|+||||+++++.+...
T Consensus 48 vll~G~~GtGKT~la~~la~~~~ 70 (257)
T 1lv7_A 48 VLMVGPPGTGKTLLAKAIAGEAK 70 (257)
T ss_dssp EEEECCTTSCHHHHHHHHHHHHT
T ss_pred EEEECcCCCCHHHHHHHHHHHcC
Confidence 46899999999999999998764
No 199
>3ake_A Cytidylate kinase; CMP kinase, CMP complex, open conformation, nucleotide metab transferase; HET: C5P; 1.50A {Thermus thermophilus} PDB: 3akc_A* 3akd_A*
Probab=98.62 E-value=2.3e-08 Score=51.82 Aligned_cols=23 Identities=30% Similarity=0.388 Sum_probs=20.5
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhh
Q 044571 1 MEGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~ 23 (79)
+++|.|++||||||+++.+...+
T Consensus 4 ~i~i~G~~GsGKst~~~~la~~l 26 (208)
T 3ake_A 4 IVTIDGPSASGKSSVARRVAAAL 26 (208)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHhc
Confidence 37899999999999999998754
No 200
>1sxj_E Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=98.62 E-value=2.1e-08 Score=55.70 Aligned_cols=25 Identities=24% Similarity=0.137 Sum_probs=21.1
Q ss_pred eeEEcCCCCcHHHHHHHHHh-hhccc
Q 044571 2 EGLYGISCVGKTTLANFVGN-QLRQE 26 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g-~~~~~ 26 (79)
+.|+||+|+||||+++++.+ +..+.
T Consensus 39 ~ll~Gp~G~GKTtl~~~la~~l~~~~ 64 (354)
T 1sxj_E 39 LLLYGPNGTGKKTRCMALLESIFGPG 64 (354)
T ss_dssp EEEECSTTSSHHHHHHTHHHHHSCTT
T ss_pred EEEECCCCCCHHHHHHHHHHHHcCCC
Confidence 56899999999999999999 55543
No 201
>1udx_A The GTP-binding protein OBG; TGS domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.07A {Thermus thermophilus} SCOP: b.117.1.1 c.37.1.8 d.242.1.1
Probab=98.61 E-value=1e-08 Score=58.64 Aligned_cols=23 Identities=26% Similarity=0.304 Sum_probs=21.0
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhh
Q 044571 1 MEGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~ 23 (79)
.++|+|+||+|||||+++|.+..
T Consensus 159 ~VgLVG~~gAGKSTLL~~Lsg~~ 181 (416)
T 1udx_A 159 DVGLVGYPNAGKSSLLAAMTRAH 181 (416)
T ss_dssp SEEEECCGGGCHHHHHHHHCSSC
T ss_pred EEEEECCCCCcHHHHHHHHHcCC
Confidence 37899999999999999999984
No 202
>3trf_A Shikimate kinase, SK; amino acid biosynthesis, transferase; 2.60A {Coxiella burnetii}
Probab=98.60 E-value=3.4e-08 Score=50.45 Aligned_cols=22 Identities=23% Similarity=0.264 Sum_probs=19.5
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
+.|+|++||||||+++.+...+
T Consensus 8 i~l~G~~GsGKst~a~~La~~l 29 (185)
T 3trf_A 8 IYLIGLMGAGKTSVGSQLAKLT 29 (185)
T ss_dssp EEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHh
Confidence 6799999999999999997654
No 203
>3k1j_A LON protease, ATP-dependent protease LON; ATP-binding, nucleotide-binding, Pro hydrolase; HET: ADP PE8; 2.00A {Thermococcus onnurineus}
Probab=98.60 E-value=3.3e-08 Score=58.68 Aligned_cols=25 Identities=28% Similarity=0.282 Sum_probs=22.8
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhccc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLRQE 26 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~~~ 26 (79)
+.|+||||+|||||+++|++..++.
T Consensus 63 vll~Gp~GtGKTtlar~ia~~l~~~ 87 (604)
T 3k1j_A 63 VLLIGEPGTGKSMLGQAMAELLPTE 87 (604)
T ss_dssp EEEECCTTSSHHHHHHHHHHTSCCS
T ss_pred EEEEeCCCCCHHHHHHHHhccCCcc
Confidence 6799999999999999999998764
No 204
>3iij_A Coilin-interacting nuclear ATPase protein; alpha and beta proteins (A/B), protein binding, transferase, phosphotransferase; HET: ADP; 1.76A {Homo sapiens} SCOP: c.37.1.1 PDB: 3iik_A 3iil_A* 3iim_A* 1rkb_A
Probab=98.60 E-value=3.9e-08 Score=50.10 Aligned_cols=23 Identities=35% Similarity=0.283 Sum_probs=19.8
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhh
Q 044571 1 MEGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++.|+|++||||||+++.+...+
T Consensus 13 ~i~i~G~~GsGKst~~~~l~~~~ 35 (180)
T 3iij_A 13 NILLTGTPGVGKTTLGKELASKS 35 (180)
T ss_dssp CEEEECSTTSSHHHHHHHHHHHH
T ss_pred eEEEEeCCCCCHHHHHHHHHHHh
Confidence 36799999999999999997543
No 205
>1nks_A Adenylate kinase; thermophilic, transferase; HET: AMP ADP; 2.57A {Sulfolobus acidocaldarius} SCOP: c.37.1.1
Probab=98.60 E-value=2.4e-08 Score=51.10 Aligned_cols=24 Identities=33% Similarity=0.353 Sum_probs=20.9
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
++.|.|++||||||+++.|...+.
T Consensus 3 ~I~i~G~~GsGKsT~~~~L~~~l~ 26 (194)
T 1nks_A 3 IGIVTGIPGVGKSTVLAKVKEILD 26 (194)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHH
Confidence 368999999999999999987654
No 206
>1q3t_A Cytidylate kinase; nucleotide monophosphate kinase, CMP kinase, transferase; NMR {Streptococcus pneumoniae} SCOP: c.37.1.1
Probab=98.60 E-value=2.8e-08 Score=52.74 Aligned_cols=23 Identities=22% Similarity=0.408 Sum_probs=20.2
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhh
Q 044571 1 MEGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~ 23 (79)
+++|+|++||||||+++.+.+.+
T Consensus 18 ~i~i~G~~gsGKst~~~~l~~~l 40 (236)
T 1q3t_A 18 QIAIDGPASSGKSTVAKIIAKDF 40 (236)
T ss_dssp EEEEECSSCSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHc
Confidence 37899999999999999998743
No 207
>2z0h_A DTMP kinase, thymidylate kinase; ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics, NPPSFA; HET: ADP TYD; 2.10A {Thermotoga maritima} PDB: 3hjn_A*
Probab=98.59 E-value=3e-08 Score=50.94 Aligned_cols=23 Identities=26% Similarity=0.358 Sum_probs=20.7
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhh
Q 044571 1 MEGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~ 23 (79)
+++|.|+.||||||+++.+...+
T Consensus 2 ~I~l~G~~GsGKsT~~~~L~~~l 24 (197)
T 2z0h_A 2 FITFEGIDGSGKSTQIQLLAQYL 24 (197)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
Confidence 47899999999999999998765
No 208
>1ls1_A Signal recognition particle protein; FFH, SRP54, SRP, GTPase, ultrahigh resolution, protein transport; 1.10A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 1jpn_B* 1jpj_A* 1ry1_U* 2j45_A* 1o87_A* 2c04_A* 2j46_A* 1rj9_B* 2c03_A* 2j7p_A* 1okk_A* 2cnw_A* 1ng1_A* 2xkv_A 3ng1_A 1ffh_A 2ng1_A*
Probab=98.59 E-value=2.7e-08 Score=54.63 Aligned_cols=26 Identities=27% Similarity=0.202 Sum_probs=23.3
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhccc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQE 26 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~ 26 (79)
+++++|+||+||||++..+++.+.+.
T Consensus 100 ~i~i~g~~G~GKTT~~~~la~~~~~~ 125 (295)
T 1ls1_A 100 LWFLVGLQGSGKTTTAAKLALYYKGK 125 (295)
T ss_dssp EEEEECCTTTTHHHHHHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHc
Confidence 36899999999999999999998764
No 209
>3lxx_A GTPase IMAP family member 4; structural genomics consortium, SGC, coiled coil, GTP- binding, nucleotide-binding, immune system; HET: GDP; 2.15A {Homo sapiens}
Probab=98.58 E-value=3.5e-08 Score=52.35 Aligned_cols=24 Identities=21% Similarity=0.100 Sum_probs=21.3
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhcc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLRQ 25 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~~ 25 (79)
++|+|++|+|||||++.+.|....
T Consensus 32 i~lvG~~g~GKStlin~l~g~~~~ 55 (239)
T 3lxx_A 32 IVLVGKTGAGKSATGNSILGRKVF 55 (239)
T ss_dssp EEEECCTTSSHHHHHHHHHTSCCS
T ss_pred EEEECCCCCCHHHHHHHHcCCCcC
Confidence 689999999999999999987543
No 210
>4eaq_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, MTBI, transferase; HET: ATM; 1.85A {Staphylococcus aureus subsp} PDB: 4dwj_A* 4f4i_A
Probab=98.58 E-value=3.6e-08 Score=52.34 Aligned_cols=25 Identities=32% Similarity=0.263 Sum_probs=21.9
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQ 25 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~ 25 (79)
+++|.|++||||||+++.|...+..
T Consensus 28 ~i~i~G~~GsGKsT~~~~l~~~l~~ 52 (229)
T 4eaq_A 28 FITFEGPEGSGKTTVINEVYHRLVK 52 (229)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHTT
T ss_pred EEEEEcCCCCCHHHHHHHHHHHHhc
Confidence 3689999999999999999988763
No 211
>1zu4_A FTSY; GTPase, signal recognition particle, SRP, receptor, protein transport; 1.95A {Mycoplasma mycoides} PDB: 1zu5_A
Probab=98.57 E-value=3.1e-08 Score=54.98 Aligned_cols=26 Identities=27% Similarity=0.220 Sum_probs=23.1
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhccc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQE 26 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~ 26 (79)
+++|+|+||+||||++..|.+.+.+.
T Consensus 107 vI~ivG~~G~GKTT~~~~LA~~l~~~ 132 (320)
T 1zu4_A 107 IFMLVGVNGTGKTTSLAKMANYYAEL 132 (320)
T ss_dssp EEEEESSTTSSHHHHHHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHC
Confidence 37899999999999999999988764
No 212
>1e6c_A Shikimate kinase; phosphoryl transfer, ADP, shikimate pathway, P-loop protein, transferase; 1.8A {Erwinia chrysanthemi} SCOP: c.37.1.2 PDB: 1shk_A 2shk_A*
Probab=98.57 E-value=5.5e-08 Score=49.10 Aligned_cols=23 Identities=22% Similarity=0.151 Sum_probs=20.1
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhh
Q 044571 1 MEGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++.|+|++||||||+++.+...+
T Consensus 4 ~I~l~G~~GsGKsT~a~~La~~l 26 (173)
T 1e6c_A 4 PIFMVGARGCGMTTVGRELARAL 26 (173)
T ss_dssp CEEEESCTTSSHHHHHHHHHHHH
T ss_pred eEEEECCCCCCHHHHHHHHHHHh
Confidence 47899999999999999997653
No 213
>2rhm_A Putative kinase; P-loop containing nucleoside triphosphate hydrolases fold, S genomics, joint center for structural genomics, JCSG; HET: MSE; 1.70A {Chloroflexus aurantiacus}
Probab=98.56 E-value=3.6e-08 Score=50.51 Aligned_cols=22 Identities=32% Similarity=0.336 Sum_probs=19.4
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
+.|+|++||||||+++.+...+
T Consensus 8 I~l~G~~GsGKST~~~~L~~~l 29 (193)
T 2rhm_A 8 IIVTGHPATGKTTLSQALATGL 29 (193)
T ss_dssp EEEEESTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHc
Confidence 6789999999999999997654
No 214
>1uj2_A Uridine-cytidine kinase 2; alpha/beta mononucleotide-binding HOLD, transferase; HET: C5P ADP; 1.80A {Homo sapiens} SCOP: c.37.1.6 PDB: 1uei_A* 1uej_A* 1udw_A 1ufq_A* 1xrj_A*
Probab=98.56 E-value=4.1e-08 Score=52.59 Aligned_cols=23 Identities=22% Similarity=0.351 Sum_probs=20.1
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhh
Q 044571 1 MEGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~ 23 (79)
+++|.|++||||||+++.|...+
T Consensus 24 iI~I~G~~GSGKST~a~~L~~~l 46 (252)
T 1uj2_A 24 LIGVSGGTASGKSSVCAKIVQLL 46 (252)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHHHh
Confidence 47899999999999999997743
No 215
>1y63_A LMAJ004144AAA protein; structural genomics, protein structure initiative, PSI, SGPP structural genomics of pathogenic protozoa consortium; HET: ADP; 1.70A {Leishmania major} SCOP: c.37.1.1
Probab=98.56 E-value=5.3e-08 Score=49.93 Aligned_cols=21 Identities=24% Similarity=0.393 Sum_probs=19.4
Q ss_pred eeEEcCCCCcHHHHHHHHHhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQ 22 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~ 22 (79)
++|+|++||||||+++.+...
T Consensus 13 I~l~G~~GsGKSTv~~~La~~ 33 (184)
T 1y63_A 13 ILITGTPGTGKTSMAEMIAAE 33 (184)
T ss_dssp EEEECSTTSSHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHh
Confidence 689999999999999999776
No 216
>3m6a_A ATP-dependent protease LA 1; alpha, beta, ATP-binding, hydrolase, nucleotide-binding, Pro serine protease, stress response; HET: ADP; 3.40A {Bacillus subtilis} PDB: 1x37_A
Probab=98.56 E-value=4.2e-08 Score=57.67 Aligned_cols=25 Identities=36% Similarity=0.419 Sum_probs=22.2
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhccc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLRQE 26 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~~~ 26 (79)
+.|+||+|+|||||+++|++...+.
T Consensus 111 vll~Gp~GtGKTtlar~ia~~l~~~ 135 (543)
T 3m6a_A 111 LCLAGPPGVGKTSLAKSIAKSLGRK 135 (543)
T ss_dssp EEEESSSSSSHHHHHHHHHHHHTCE
T ss_pred EEEECCCCCCHHHHHHHHHHhcCCC
Confidence 6789999999999999999987553
No 217
>1mky_A Probable GTP-binding protein ENGA; GTPase, DER, KH-domain, tandem G-domains, ligand binding protein; HET: GDP; 1.90A {Thermotoga maritima} SCOP: c.37.1.8 c.37.1.8 d.52.5.1
Probab=98.56 E-value=4.1e-08 Score=56.34 Aligned_cols=23 Identities=39% Similarity=0.427 Sum_probs=21.0
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
++|+|+||+|||||++.+.|...
T Consensus 183 vaivG~~gvGKSTLln~l~g~~~ 205 (439)
T 1mky_A 183 VAIVGRPNVGKSTLFNAILNKER 205 (439)
T ss_dssp EEEECSTTSSHHHHHHHHHTSTT
T ss_pred EEEECCCCCCHHHHHHHHhCCcc
Confidence 68999999999999999999753
No 218
>2iyv_A Shikimate kinase, SK; transferase, aromatic amino acid biosynthesis, P-loop kinase, metal- binding, shikimate pathway; HET: ADP; 1.35A {Mycobacterium tuberculosis} SCOP: c.37.1.2 PDB: 2iyr_A* 2iyq_A* 2iyt_A 2iyu_A* 2iys_A* 2iyw_A* 2iyx_A* 2iyy_A* 2iyz_A* 2g1k_A* 1l4y_A* 1u8a_A* 1we2_A* 1zyu_A* 2dfn_A* 2dft_A* 2g1j_A 1l4u_A* 3baf_A*
Probab=98.56 E-value=5.8e-08 Score=49.57 Aligned_cols=23 Identities=26% Similarity=0.380 Sum_probs=20.1
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhh
Q 044571 1 MEGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~ 23 (79)
+++|+|++||||||+++.|...+
T Consensus 4 ~I~l~G~~GsGKsT~a~~La~~l 26 (184)
T 2iyv_A 4 KAVLVGLPGSGKSTIGRRLAKAL 26 (184)
T ss_dssp SEEEECSTTSSHHHHHHHHHHHH
T ss_pred eEEEECCCCCCHHHHHHHHHHHc
Confidence 47899999999999999997654
No 219
>2grj_A Dephospho-COA kinase; TM1387, EC 2.7.1.24, dephosphocoenzyme kinase, structural genomics, joint center for structural GE JCSG; HET: ADP COD; 2.60A {Thermotoga maritima}
Probab=98.55 E-value=4.6e-08 Score=50.77 Aligned_cols=22 Identities=27% Similarity=0.457 Sum_probs=19.9
Q ss_pred CeeEEcCCCCcHHHHHHHHHhh
Q 044571 1 MEGLYGISCVGKTTLANFVGNQ 22 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~ 22 (79)
+++|+|+.||||||+.+.+...
T Consensus 14 iIgltG~~GSGKSTva~~L~~~ 35 (192)
T 2grj_A 14 VIGVTGKIGTGKSTVCEILKNK 35 (192)
T ss_dssp EEEEECSTTSSHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHh
Confidence 4799999999999999999765
No 220
>3k53_A Ferrous iron transport protein B; GTPase fold, helical bundle, G-protein, prokaryote, GTP-BIND nucleotide-binding, metal transport; 2.70A {Pyrococcus furiosus}
Probab=98.55 E-value=4.4e-08 Score=52.96 Aligned_cols=23 Identities=35% Similarity=0.333 Sum_probs=21.0
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
++++|++|+|||||++.+.|...
T Consensus 6 i~lvG~~g~GKTTL~n~l~g~~~ 28 (271)
T 3k53_A 6 VALVGNPNVGKTTIFNALTGLRQ 28 (271)
T ss_dssp EEEEECSSSSHHHHHHHHHTTCE
T ss_pred EEEECCCCCCHHHHHHHHhCCCc
Confidence 68999999999999999998754
No 221
>3fb4_A Adenylate kinase; psychrophIle, phosphotransferase, ATP-binding, nucleotide-binding, transferase; HET: AP5; 2.00A {Marinibacillus marinus}
Probab=98.54 E-value=6.3e-08 Score=50.57 Aligned_cols=22 Identities=27% Similarity=0.259 Sum_probs=19.2
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|++||||||+++.+...+
T Consensus 3 I~l~G~~GsGKsT~a~~L~~~~ 24 (216)
T 3fb4_A 3 IVLMGLPGAGKGTQAEQIIEKY 24 (216)
T ss_dssp EEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHh
Confidence 6899999999999999996543
No 222
>2p67_A LAO/AO transport system kinase; ARGK, structural GEN PSI-2, protein structure initiative, NEW YORK SGX research for structural genomics; 1.80A {Escherichia coli} SCOP: c.37.1.10
Probab=98.54 E-value=3.9e-08 Score=54.88 Aligned_cols=25 Identities=28% Similarity=0.344 Sum_probs=22.2
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQ 25 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~ 25 (79)
+++|+|++|+||||+++.+.+...+
T Consensus 58 ~i~i~G~~g~GKSTl~~~l~~~~~~ 82 (341)
T 2p67_A 58 RLGVTGTPGAGKSTFLEAFGMLLIR 82 (341)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHHH
T ss_pred EEEEEcCCCCCHHHHHHHHHHHHHh
Confidence 3789999999999999999988754
No 223
>2c95_A Adenylate kinase 1; transferase, AP4A, nucleotide kinase, transferase ATP-bindi; HET: B4P; 1.71A {Homo sapiens} PDB: 1z83_A* 3adk_A
Probab=98.53 E-value=4.8e-08 Score=50.17 Aligned_cols=23 Identities=17% Similarity=0.068 Sum_probs=19.8
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhh
Q 044571 1 MEGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~ 23 (79)
+++|+|++||||||+++.+...+
T Consensus 11 ~I~l~G~~GsGKsT~~~~La~~l 33 (196)
T 2c95_A 11 IIFVVGGPGSGKGTQCEKIVQKY 33 (196)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHh
Confidence 37899999999999999997643
No 224
>1tev_A UMP-CMP kinase; ploop, NMP binding region, LID region, conformational changes, transferase; 2.10A {Homo sapiens} SCOP: c.37.1.1
Probab=98.53 E-value=5.4e-08 Score=49.83 Aligned_cols=22 Identities=18% Similarity=0.089 Sum_probs=19.2
Q ss_pred CeeEEcCCCCcHHHHHHHHHhh
Q 044571 1 MEGLYGISCVGKTTLANFVGNQ 22 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~ 22 (79)
+++|+|++||||||+++.+...
T Consensus 5 ~I~l~G~~GsGKsT~a~~L~~~ 26 (196)
T 1tev_A 5 VVFVLGGPGAGKGTQCARIVEK 26 (196)
T ss_dssp EEEEECCTTSSHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHH
Confidence 3789999999999999988654
No 225
>2pbr_A DTMP kinase, thymidylate kinase; transferase, nucleotide biosynthesis, TMP-binding, A binding, structural genomics, NPPSFA; 1.96A {Aquifex aeolicus}
Probab=98.53 E-value=5.6e-08 Score=49.77 Aligned_cols=23 Identities=35% Similarity=0.322 Sum_probs=20.5
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhh
Q 044571 1 MEGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~ 23 (79)
+++|+|+.||||||+++.+...+
T Consensus 2 ~I~l~G~~GsGKsT~~~~L~~~l 24 (195)
T 2pbr_A 2 LIAFEGIDGSGKTTQAKKLYEYL 24 (195)
T ss_dssp EEEEECSTTSCHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
Confidence 37899999999999999998765
No 226
>2p5t_B PEZT; postsegregational killing system, phosphoryltransferase, HEL helix motif, transcription regulator; 3.20A {Streptococcus pneumoniae}
Probab=98.53 E-value=2.4e-08 Score=53.55 Aligned_cols=23 Identities=30% Similarity=0.281 Sum_probs=20.5
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
+.|+|++||||||+++.|...+.
T Consensus 35 i~l~G~~GsGKSTla~~L~~~l~ 57 (253)
T 2p5t_B 35 ILLGGQSGAGKTTIHRIKQKEFQ 57 (253)
T ss_dssp EEEESCGGGTTHHHHHHHHHHTT
T ss_pred EEEECCCCCCHHHHHHHHHHhcC
Confidence 67899999999999999988654
No 227
>2bwj_A Adenylate kinase 5; phosphoryl transfer reaction, transferase; HET: AMP; 2.3A {Homo sapiens}
Probab=98.53 E-value=5.1e-08 Score=50.17 Aligned_cols=23 Identities=17% Similarity=0.072 Sum_probs=20.0
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhh
Q 044571 1 MEGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~ 23 (79)
+++|+|++||||||+++.+...+
T Consensus 14 ~I~l~G~~GsGKsT~a~~L~~~l 36 (199)
T 2bwj_A 14 IIFIIGGPGSGKGTQCEKLVEKY 36 (199)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHh
Confidence 37899999999999999997654
No 228
>2v54_A DTMP kinase, thymidylate kinase; nucleotide biosynthesis, ATP-binding, nucleotide-binding, poxvirus, transferase; HET: TYD POP; 2.4A {Vaccinia virus copenhagen} PDB: 2w0s_A*
Probab=98.53 E-value=5.5e-08 Score=50.26 Aligned_cols=23 Identities=22% Similarity=0.206 Sum_probs=20.4
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhh
Q 044571 1 MEGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~ 23 (79)
+++|+|+.||||||+++.+...+
T Consensus 6 ~I~l~G~~GsGKsT~~~~L~~~l 28 (204)
T 2v54_A 6 LIVFEGLDKSGKTTQCMNIMESI 28 (204)
T ss_dssp EEEEECCTTSSHHHHHHHHHHTS
T ss_pred EEEEEcCCCCCHHHHHHHHHHHH
Confidence 37899999999999999998765
No 229
>2plr_A DTMP kinase, probable thymidylate kinase; TMP-binding, ATP-binding, structural GEN NPPSFA; HET: 1PE PGE EPE PG4; 1.60A {Sulfolobus tokodaii}
Probab=98.52 E-value=6e-08 Score=50.30 Aligned_cols=24 Identities=21% Similarity=0.322 Sum_probs=20.9
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhcc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLRQ 25 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~~ 25 (79)
++|.|++||||||+++.|...+..
T Consensus 7 I~i~G~~GsGKsT~~~~L~~~l~~ 30 (213)
T 2plr_A 7 IAFEGIDGSGKSSQATLLKDWIEL 30 (213)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHTT
T ss_pred EEEEcCCCCCHHHHHHHHHHHHhh
Confidence 689999999999999999876543
No 230
>3dl0_A Adenylate kinase; phosphotransferase, zinc coordination, ATP-binding, binding, nucleotide biosynthesis, nucleotide-binding, trans; HET: AP5; 1.58A {Bacillus subtilis} PDB: 1p3j_A* 2ori_A* 2eu8_A* 2oo7_A* 2p3s_A* 2qaj_A* 2osb_A* 3dkv_A* 1zin_A* 1zio_A* 1zip_A* 1s3g_A*
Probab=98.52 E-value=7.7e-08 Score=50.26 Aligned_cols=22 Identities=23% Similarity=0.238 Sum_probs=19.2
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|++||||||+++.+...+
T Consensus 3 I~l~G~~GsGKsT~a~~L~~~~ 24 (216)
T 3dl0_A 3 LVLMGLPGAGKGTQGERIVEKY 24 (216)
T ss_dssp EEEECSTTSSHHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHHHh
Confidence 6899999999999999996543
No 231
>1fnn_A CDC6P, cell division control protein 6; ORC1, AAA protein, DNA replication initation factor, cell cycle control factor; HET: ADP; 2.00A {Pyrobaculum aerophilum} SCOP: a.4.5.11 c.37.1.20
Probab=98.52 E-value=6e-07 Score=50.23 Aligned_cols=51 Identities=20% Similarity=0.233 Sum_probs=33.2
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhcccCCCCcEEEEEe--cCCccHHHHHHHHHHHhc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLRQEKIFDEVGIATV--SQDPDIIKVQGELAKSLG 55 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~~~~~~~~~~~~~v--~q~~~~~~v~~~i~~~~~ 55 (79)
+.|+||+|+||||+++.+.+...... ...+.++ .+..+...+...+...+.
T Consensus 47 ~li~G~~G~GKTtl~~~l~~~~~~~~---~~~~~~i~~~~~~~~~~~~~~l~~~l~ 99 (389)
T 1fnn_A 47 ATLLGRPGTGKTVTLRKLWELYKDKT---TARFVYINGFIYRNFTAIIGEIARSLN 99 (389)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHTTSC---CCEEEEEETTTCCSHHHHHHHHHHHTT
T ss_pred EEEECCCCCCHHHHHHHHHHHHhhhc---CeeEEEEeCccCCCHHHHHHHHHHHhC
Confidence 57899999999999999998876542 1223333 333344455666655553
No 232
>1gvn_B Zeta; postsegregational killing system, plasmid; 1.95A {Streptococcus pyogenes} SCOP: c.37.1.21 PDB: 3q8x_B*
Probab=98.51 E-value=4.6e-08 Score=53.46 Aligned_cols=22 Identities=27% Similarity=0.135 Sum_probs=19.2
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
+.|.|++||||||+++.+....
T Consensus 36 ivl~G~sGsGKSTla~~L~~~~ 57 (287)
T 1gvn_B 36 FLLGGQPGSGKTSLRSAIFEET 57 (287)
T ss_dssp EEEECCTTSCTHHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHHHh
Confidence 5689999999999999997654
No 233
>2wwf_A Thymidilate kinase, putative; transferase, malaria; HET: TMP ADP; 1.89A {Plasmodium falciparum} PDB: 2wwg_A* 2wwh_A* 2wwi_A*
Probab=98.51 E-value=6.2e-08 Score=50.34 Aligned_cols=24 Identities=21% Similarity=0.308 Sum_probs=20.7
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
+++|+|+.||||||+++.+...+.
T Consensus 12 ~I~l~G~~GsGKST~~~~L~~~l~ 35 (212)
T 2wwf_A 12 FIVFEGLDRSGKSTQSKLLVEYLK 35 (212)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHH
T ss_pred EEEEEcCCCCCHHHHHHHHHHHHH
Confidence 378999999999999999987543
No 234
>1a7j_A Phosphoribulokinase; transferase, calvin cycle; 2.50A {Rhodobacter sphaeroides} SCOP: c.37.1.6
Probab=98.51 E-value=1.7e-08 Score=55.30 Aligned_cols=24 Identities=21% Similarity=0.307 Sum_probs=17.7
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
+++|.|++||||||+++.+...+.
T Consensus 7 iIgItG~sGSGKSTva~~L~~~lg 30 (290)
T 1a7j_A 7 IISVTGSSGAGTSTVKHTFDQIFR 30 (290)
T ss_dssp EEEEESCC---CCTHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHh
Confidence 479999999999999999977543
No 235
>1zak_A Adenylate kinase; ATP:AMP-phosphotransferase, transferase; HET: AP5; 3.50A {Zea mays} SCOP: c.37.1.1 g.41.2.1
Probab=98.50 E-value=8.9e-08 Score=50.29 Aligned_cols=23 Identities=17% Similarity=0.245 Sum_probs=20.1
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhh
Q 044571 1 MEGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++.|+|++||||||+++.|...+
T Consensus 7 ~I~l~G~~GsGKsT~~~~La~~l 29 (222)
T 1zak_A 7 KVMISGAPASGKGTQCELIKTKY 29 (222)
T ss_dssp CEEEEESTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHh
Confidence 47899999999999999997654
No 236
>1qf9_A UMP/CMP kinase, protein (uridylmonophosphate/cytidylmonophosphate kinase); nucleoside monophosphate kinase, NMP kinase; HET: ADP C5P; 1.70A {Dictyostelium discoideum} SCOP: c.37.1.1 PDB: 1uke_A* 2ukd_A* 3ukd_A* 4ukd_A* 5ukd_A*
Probab=98.49 E-value=7.3e-08 Score=49.27 Aligned_cols=22 Identities=18% Similarity=0.056 Sum_probs=19.3
Q ss_pred CeeEEcCCCCcHHHHHHHHHhh
Q 044571 1 MEGLYGISCVGKTTLANFVGNQ 22 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~ 22 (79)
+++|+|+.||||||+++.+...
T Consensus 8 ~I~l~G~~GsGKsT~~~~L~~~ 29 (194)
T 1qf9_A 8 VVFVLGGPGSGKGTQCANIVRD 29 (194)
T ss_dssp EEEEEESTTSSHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHH
Confidence 3789999999999999998764
No 237
>2dhr_A FTSH; AAA+ protein, hexameric Zn metalloprotease, hydrolase; HET: ADP; 3.90A {Thermus thermophilus}
Probab=98.49 E-value=8.8e-08 Score=55.95 Aligned_cols=23 Identities=43% Similarity=0.411 Sum_probs=20.7
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
+.|+||+|+|||||+++|.+...
T Consensus 67 vLL~GppGtGKTtLaraIa~~~~ 89 (499)
T 2dhr_A 67 VLLVGPPGVGKTHLARAVAGEAR 89 (499)
T ss_dssp EEEECSSSSSHHHHHHHHHHHTT
T ss_pred EEEECCCCCCHHHHHHHHHHHhC
Confidence 46899999999999999999864
No 238
>1ukz_A Uridylate kinase; transferase; HET: ADP AMP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1uky_A*
Probab=98.49 E-value=8.1e-08 Score=49.72 Aligned_cols=22 Identities=18% Similarity=0.063 Sum_probs=19.1
Q ss_pred CeeEEcCCCCcHHHHHHHHHhh
Q 044571 1 MEGLYGISCVGKTTLANFVGNQ 22 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~ 22 (79)
+++|+|++||||||+++.+...
T Consensus 17 ~I~l~G~~GsGKsT~~~~L~~~ 38 (203)
T 1ukz_A 17 VIFVLGGPGAGKGTQCEKLVKD 38 (203)
T ss_dssp EEEEECSTTSSHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHH
Confidence 3789999999999999998754
No 239
>2qtf_A Protein HFLX, GTP-binding protein; beta-alpha-barrels, nucleotide-binding, nucleotide binding protein; 2.00A {Sulfolobus solfataricus P2} PDB: 2qth_A* 3kxi_A* 3kxl_A 3kxk_A
Probab=98.49 E-value=5.9e-08 Score=54.67 Aligned_cols=23 Identities=30% Similarity=0.384 Sum_probs=20.1
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
++|+|++|+|||||++.+.+...
T Consensus 182 V~lvG~~naGKSTLln~L~~~~~ 204 (364)
T 2qtf_A 182 IGIVGYTNSGKTSLFNSLTGLTQ 204 (364)
T ss_dssp EEEECBTTSSHHHHHHHHHCC--
T ss_pred EEEECCCCCCHHHHHHHHHCCCc
Confidence 78999999999999999998764
No 240
>2f6r_A COA synthase, bifunctional coenzyme A synthase; 18044849, bifunctional coenzyme A synthase (COA synthase), S genomics; HET: ACO UNL; 1.70A {Mus musculus}
Probab=98.48 E-value=6.6e-08 Score=52.69 Aligned_cols=21 Identities=43% Similarity=0.577 Sum_probs=18.9
Q ss_pred CeeEEcCCCCcHHHHHHHHHh
Q 044571 1 MEGLYGISCVGKTTLANFVGN 21 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g 21 (79)
+++|+|++||||||+++.+..
T Consensus 77 iI~I~G~~GSGKSTva~~La~ 97 (281)
T 2f6r_A 77 VLGLTGISGSGKSSVAQRLKN 97 (281)
T ss_dssp EEEEEECTTSCHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHH
Confidence 378999999999999999973
No 241
>2pt5_A Shikimate kinase, SK; aromatic amino acid biosynthesis, P-loop kinase, SHI kinase, shikimate pathway; 2.10A {Aquifex aeolicus}
Probab=98.48 E-value=1.1e-07 Score=47.77 Aligned_cols=22 Identities=32% Similarity=0.591 Sum_probs=19.7
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|++||||||+++.+...+
T Consensus 3 I~l~G~~GsGKsT~a~~L~~~l 24 (168)
T 2pt5_A 3 IYLIGFMCSGKSTVGSLLSRSL 24 (168)
T ss_dssp EEEESCTTSCHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHh
Confidence 7899999999999999997754
No 242
>2vf7_A UVRA2, excinuclease ABC, subunit A.; DNA-binding protein, nucleotide-binding, zinc-binding domain, SOS response, metal-binding; HET: ADP; 2.30A {Deinococcus radiodurans} PDB: 2vf8_A*
Probab=98.48 E-value=1.3e-08 Score=62.41 Aligned_cols=24 Identities=33% Similarity=0.466 Sum_probs=20.5
Q ss_pred CeeEEcCCCCcHHHHHHH-HHhhhc
Q 044571 1 MEGLYGISCVGKTTLANF-VGNQLR 24 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~-i~g~~~ 24 (79)
+++|+|+||||||||++. ++|.+.
T Consensus 525 iv~I~G~nGSGKSTLl~~~L~g~l~ 549 (842)
T 2vf7_A 525 MTSVTGVSGSGKSTLVSQALVDALA 549 (842)
T ss_dssp EEEEECCTTSSHHHHCCCCCHHHHH
T ss_pred EEEEEcCCCcCHHHHHHHHHHHHHH
Confidence 479999999999999997 777653
No 243
>1nn5_A Similar to deoxythymidylate kinase (thymidylate K; P-loop, D4TMP, transferase; HET: 2DT ANP; 1.50A {Homo sapiens} SCOP: c.37.1.1 PDB: 1e2e_A* 1e2d_A* 1e2g_A* 1e2q_A* 1e99_A* 1e9a_A* 1e9b_A* 1nmx_A* 1nmz_A* 1nn0_A* 1nn1_A* 1e2f_A* 1nn3_A* 2xx3_A* 1e9c_A* 1e9d_A* 1e9e_A* 1e98_A* 1nmy_A* 1e9f_A*
Probab=98.47 E-value=8.5e-08 Score=49.87 Aligned_cols=24 Identities=25% Similarity=0.245 Sum_probs=20.7
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
+++|+|+.||||||+++.+...+.
T Consensus 11 ~I~l~G~~GsGKsT~~~~L~~~l~ 34 (215)
T 1nn5_A 11 LIVLEGVDRAGKSTQSRKLVEALC 34 (215)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHH
Confidence 378999999999999999987654
No 244
>1zuh_A Shikimate kinase; alpha-beta protein, transferase; 1.80A {Helicobacter pylori} PDB: 1zui_A* 3hr7_A 3muf_A* 3mrs_A 3n2e_A*
Probab=98.47 E-value=1.1e-07 Score=48.00 Aligned_cols=23 Identities=35% Similarity=0.354 Sum_probs=20.0
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhh
Q 044571 1 MEGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~ 23 (79)
+++|+|+.||||||+.+.+...+
T Consensus 9 ~i~l~G~~GsGKSTva~~La~~l 31 (168)
T 1zuh_A 9 HLVLIGFMGSGKSSLAQELGLAL 31 (168)
T ss_dssp EEEEESCTTSSHHHHHHHHHHHH
T ss_pred eEEEECCCCCCHHHHHHHHHHHh
Confidence 37899999999999999997654
No 245
>2ged_A SR-beta, signal recognition particle receptor beta subunit; protein transport, G protein, proline isomerization, circular permutation; 2.20A {Saccharomyces cerevisiae}
Probab=98.46 E-value=1.2e-07 Score=48.42 Aligned_cols=22 Identities=23% Similarity=0.212 Sum_probs=19.9
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|++|+|||||++.+.+..
T Consensus 51 i~vvG~~g~GKSsll~~l~~~~ 72 (193)
T 2ged_A 51 IIIAGPQNSGKTSLLTLLTTDS 72 (193)
T ss_dssp EEEECCTTSSHHHHHHHHHHSS
T ss_pred EEEECCCCCCHHHHHHHHhcCC
Confidence 6899999999999999998764
No 246
>1sxj_C Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=98.46 E-value=1.2e-07 Score=52.65 Aligned_cols=23 Identities=22% Similarity=0.255 Sum_probs=20.5
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
+.++||+|+||||+++++.+.+.
T Consensus 49 ~ll~Gp~G~GKTtla~~la~~l~ 71 (340)
T 1sxj_C 49 LLFYGPPGTGKTSTIVALAREIY 71 (340)
T ss_dssp EEEECSSSSSHHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHc
Confidence 56899999999999999998754
No 247
>2cdn_A Adenylate kinase; phosphoryl transfer, associative mechanism, ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase; HET: ADP; 1.9A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1p4s_A
Probab=98.46 E-value=1.1e-07 Score=49.22 Aligned_cols=22 Identities=32% Similarity=0.235 Sum_probs=19.3
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
+.|+|+.||||||+++.|...+
T Consensus 23 I~l~G~~GsGKST~a~~La~~l 44 (201)
T 2cdn_A 23 VLLLGPPGAGKGTQAVKLAEKL 44 (201)
T ss_dssp EEEECCTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHh
Confidence 6899999999999999997643
No 248
>2qag_A Septin-2, protein NEDD5; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=98.46 E-value=7.8e-08 Score=54.08 Aligned_cols=22 Identities=32% Similarity=0.122 Sum_probs=19.7
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|++|+|||||++.|++..
T Consensus 40 I~vvG~~g~GKSTLln~L~~~~ 61 (361)
T 2qag_A 40 LMVVGESGLGKSTLINSLFLTD 61 (361)
T ss_dssp EEECCCTTSCHHHHHHHHTTCC
T ss_pred EEEEcCCCCCHHHHHHHHhCCC
Confidence 6899999999999999987753
No 249
>2w58_A DNAI, primosome component (helicase loader); ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.50A {Geobacillus kaustophilus HTA426}
Probab=98.45 E-value=1.5e-07 Score=48.72 Aligned_cols=23 Identities=39% Similarity=0.313 Sum_probs=20.2
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
+.|+||+|+|||||+++++....
T Consensus 57 ~~l~G~~GtGKT~la~~i~~~~~ 79 (202)
T 2w58_A 57 LYLHGSFGVGKTYLLAAIANELA 79 (202)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHH
Confidence 46889999999999999988764
No 250
>3lda_A DNA repair protein RAD51; DNA binding protein, ATP-binding, DNA damage, DNA recombinat repair, nucleotide-binding; HET: DNA; 2.50A {Saccharomyces cerevisiae} PDB: 1szp_A*
Probab=98.45 E-value=9.6e-08 Score=54.45 Aligned_cols=25 Identities=24% Similarity=0.352 Sum_probs=19.5
Q ss_pred CeeEEcCCCCcHHHHHHHH--Hhhhcc
Q 044571 1 MEGLYGISCVGKTTLANFV--GNQLRQ 25 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i--~g~~~~ 25 (79)
++.|+|+||||||||++.+ ....++
T Consensus 180 i~~I~G~sGsGKTTLl~~la~~~~~p~ 206 (400)
T 3lda_A 180 ITELFGEFRTGKSQLCHTLAVTCQIPL 206 (400)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHTTSCG
T ss_pred EEEEEcCCCCChHHHHHHHHHHhccCc
Confidence 3689999999999999954 455444
No 251
>1zd8_A GTP:AMP phosphotransferase mitochondrial; ATP:AMP phosphotransferase, myokinase, structural genomics, structural genomics consortium, SGC; 1.48A {Homo sapiens} PDB: 2ak3_A*
Probab=98.45 E-value=1e-07 Score=50.24 Aligned_cols=22 Identities=18% Similarity=0.305 Sum_probs=19.3
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
+.|+|++||||||+++.|...+
T Consensus 10 I~l~G~~GsGKsT~a~~La~~l 31 (227)
T 1zd8_A 10 AVIMGAPGSGKGTVSSRITTHF 31 (227)
T ss_dssp EEEEECTTSSHHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHHHc
Confidence 6899999999999999997543
No 252
>3auy_A DNA double-strand break repair RAD50 ATPase; DNA repair, ABC transporter ATPase domain-like; HET: DNA ADP; 2.70A {Methanocaldococcus jannaschii} PDB: 3aux_A* 3av0_B*
Probab=98.45 E-value=9e-08 Score=53.90 Aligned_cols=20 Identities=20% Similarity=0.160 Sum_probs=17.8
Q ss_pred eeEEcCCCCcHHHHHHHHHh
Q 044571 2 EGLYGISCVGKTTLANFVGN 21 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g 21 (79)
..|+|+||+||||++.+|+=
T Consensus 28 ~vi~G~NGaGKT~ileAI~~ 47 (371)
T 3auy_A 28 VAIIGENGSGKSSIFEAVFF 47 (371)
T ss_dssp EEEEECTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHH
Confidence 57999999999999999863
No 253
>3d3q_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2; 2.70A {Staphylococcus epidermidis atcc 12228}
Probab=98.45 E-value=1.2e-07 Score=53.06 Aligned_cols=24 Identities=25% Similarity=0.315 Sum_probs=20.9
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
+++|+||+||||||+++.|...+.
T Consensus 9 lI~I~GptgSGKTtla~~La~~l~ 32 (340)
T 3d3q_A 9 LIVIVGPTASGKTELSIEVAKKFN 32 (340)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHTT
T ss_pred eEEEECCCcCcHHHHHHHHHHHcC
Confidence 378999999999999999987654
No 254
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.44 E-value=8.1e-07 Score=55.61 Aligned_cols=55 Identities=18% Similarity=0.221 Sum_probs=37.6
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcc-c-CCCCcEEEEEecCCcc--HHHHHHHHHHHhc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQ-E-KIFDEVGIATVSQDPD--IIKVQGELAKSLG 55 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~-~-~~~~~~~~~~v~q~~~--~~~v~~~i~~~~~ 55 (79)
+++|+|++|+|||||++.++..... . ..++...|+.+.+..+ .......+...+.
T Consensus 149 ~v~i~G~gG~GKTtLa~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~l~ 207 (1249)
T 3sfz_A 149 WVTIYGMAGCGKSVLAAEAVRDHSLLEGCFSGGVHWVSIGKQDKSGLLMKLQNLCMRLD 207 (1249)
T ss_dssp EEEEECSTTSSHHHHHHHHTCCHHHHTTTSTTCEEEEECCSCCHHHHHHHHHHHHHHHT
T ss_pred EEEEEeCCCCCHHHHHHHHhcChhHHHhhCCCeEEEEEECCcCchHHHHHHHHHHHHhh
Confidence 3789999999999999998876432 2 2445667999888643 2334455555553
No 255
>3cf0_A Transitional endoplasmic reticulum ATPase; AAA, P97/VCP, ERAD, CDC48, ATP-binding, lipid-binding, nucle binding, nucleus, phosphoprotein, transport; HET: ADP; 3.00A {Mus musculus}
Probab=98.44 E-value=1.5e-07 Score=51.64 Aligned_cols=23 Identities=35% Similarity=0.449 Sum_probs=20.3
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
+.|.||+|+||||+++++++...
T Consensus 52 vLL~Gp~GtGKT~la~ala~~~~ 74 (301)
T 3cf0_A 52 VLFYGPPGCGKTLLAKAIANECQ 74 (301)
T ss_dssp EEEECSSSSSHHHHHHHHHHHTT
T ss_pred EEEECCCCcCHHHHHHHHHHHhC
Confidence 56889999999999999998754
No 256
>1z2a_A RAS-related protein RAB-23; RAB GTPase, vesicular trafficking, protein transport; HET: GDP; 1.90A {Mus musculus} SCOP: c.37.1.8 PDB: 1z22_A*
Probab=98.44 E-value=1.6e-07 Score=46.78 Aligned_cols=22 Identities=18% Similarity=0.234 Sum_probs=19.6
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++++|++|+|||||++.+.+..
T Consensus 8 i~v~G~~~~GKssl~~~l~~~~ 29 (168)
T 1z2a_A 8 MVVVGNGAVGKSSMIQRYCKGI 29 (168)
T ss_dssp EEEECSTTSSHHHHHHHHHHCC
T ss_pred EEEECcCCCCHHHHHHHHHcCC
Confidence 6799999999999999998753
No 257
>3b1v_A Ferrous iron uptake transporter protein B; G protein, iron transport, GTPase, transmembrane, potassium; HET: GGM; 1.85A {Streptococcus thermophilus} PDB: 3b1w_A* 3lx5_A* 3lx8_A* 3ss8_A* 3b1z_A 3b1y_A* 3b1x_A* 3tah_A*
Probab=98.43 E-value=1.4e-07 Score=51.33 Aligned_cols=22 Identities=32% Similarity=0.371 Sum_probs=20.3
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++++|.+|+|||||++.+.|..
T Consensus 6 I~lvG~~nvGKSTL~n~L~g~~ 27 (272)
T 3b1v_A 6 IALIGNPNSGKTSLFNLITGHN 27 (272)
T ss_dssp EEEECCTTSSHHHHHHHHHCCC
T ss_pred EEEECCCCCCHHHHHHHHHCCC
Confidence 7899999999999999999864
No 258
>2vli_A Antibiotic resistance protein; transferase, tunicamycin, phosphotransferase; 1.95A {Deinococcus radiodurans}
Probab=98.43 E-value=6.7e-08 Score=49.17 Aligned_cols=22 Identities=32% Similarity=0.247 Sum_probs=15.4
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
+.|+|++||||||+++.+...+
T Consensus 8 I~l~G~~GsGKST~a~~La~~l 29 (183)
T 2vli_A 8 IWINGPFGVGKTHTAHTLHERL 29 (183)
T ss_dssp EEEECCC----CHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHHhc
Confidence 6789999999999999997653
No 259
>3t34_A Dynamin-related protein 1A, linker, dynamin-relat 1A; dynamin-like protein 1A, GTPase, membrane fission, motor Pro; HET: GDP; 2.40A {Arabidopsis thaliana} PDB: 3t35_A*
Probab=98.43 E-value=1.4e-07 Score=52.88 Aligned_cols=21 Identities=14% Similarity=0.210 Sum_probs=19.8
Q ss_pred eeEEcCCCCcHHHHHHHHHhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQ 22 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~ 22 (79)
++|+|++|+|||||++.+.|.
T Consensus 37 I~vvG~~~sGKSSLln~l~g~ 57 (360)
T 3t34_A 37 IAVVGGQSSGKSSVLESIVGK 57 (360)
T ss_dssp EEEECBTTSSHHHHHHHHHTS
T ss_pred EEEECCCCCcHHHHHHHHhCC
Confidence 789999999999999999995
No 260
>3tlx_A Adenylate kinase 2; structural genomics, structural genomics consortium, SGC, RO fold, transferase, ATP binding, phosphorylation; HET: ADP ATP AMP; 2.75A {Plasmodium falciparum}
Probab=98.42 E-value=1.5e-07 Score=50.30 Aligned_cols=21 Identities=19% Similarity=0.071 Sum_probs=18.9
Q ss_pred eeEEcCCCCcHHHHHHHHHhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQ 22 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~ 22 (79)
++|+|++||||||+++.|...
T Consensus 32 I~l~G~~GsGKsT~a~~L~~~ 52 (243)
T 3tlx_A 32 YIFLGAPGSGKGTQSLNLKKS 52 (243)
T ss_dssp EEEECCTTSSHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHH
Confidence 689999999999999999754
No 261
>2ce2_X GTPase HRAS; signaling protein, guanine nucleotide binding protein, fluor membrane, lipoprotein, palmitate, prenylation; HET: GDP XY2; 1.0A {Homo sapiens} PDB: 2cl0_X* 2cl6_X* 2cl7_X* 2clc_X* 2evw_X* 2cld_X* 1aa9_A* 1ioz_A* 1q21_A* 6q21_A* 3k9l_A* 3k9n_A* 1ctq_A* 1bkd_R 1crp_A* 1crq_A* 1crr_A* 121p_A* 1gnp_A* 1gnq_A* ...
Probab=98.42 E-value=1.8e-07 Score=46.37 Aligned_cols=22 Identities=23% Similarity=0.155 Sum_probs=19.7
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++++|++|+|||||++.+.+..
T Consensus 6 i~v~G~~~~GKssl~~~l~~~~ 27 (166)
T 2ce2_X 6 LVVVGAGGVGKSALTIQLIQNH 27 (166)
T ss_dssp EEEEESTTSSHHHHHHHHHHSS
T ss_pred EEEECCCCCCHHHHHHHHHhCc
Confidence 6899999999999999998764
No 262
>2dyk_A GTP-binding protein; GTPase, ribosome-binding protein, structural genomics; HET: GDP; 1.96A {Thermus thermophilus}
Probab=98.41 E-value=2.1e-07 Score=46.15 Aligned_cols=22 Identities=27% Similarity=0.234 Sum_probs=19.8
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++++|++|+|||||++.+.+..
T Consensus 4 i~v~G~~~~GKSsli~~l~~~~ 25 (161)
T 2dyk_A 4 VVIVGRPNVGKSSLFNRLLKKR 25 (161)
T ss_dssp EEEECCTTSSHHHHHHHHHHCC
T ss_pred EEEECCCCCCHHHHHHHHhCCC
Confidence 6899999999999999998764
No 263
>2nzj_A GTP-binding protein REM 1; GDP/GTP binding, GTP hydrolysis, RAD and GEM like GTP protein 1, structural genomics; HET: GDP; 2.50A {Homo sapiens}
Probab=98.41 E-value=1.8e-07 Score=46.96 Aligned_cols=22 Identities=36% Similarity=0.416 Sum_probs=19.4
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|++|+|||||++.+.+..
T Consensus 7 i~i~G~~~vGKSsl~~~l~~~~ 28 (175)
T 2nzj_A 7 VVLLGDPGVGKTSLASLFAGKQ 28 (175)
T ss_dssp EEEECCTTSSHHHHHHHHHCC-
T ss_pred EEEECCCCccHHHHHHHHhcCC
Confidence 6899999999999999998764
No 264
>3lxw_A GTPase IMAP family member 1; immunity, structural genomics consortium, SGC, immune system; HET: GDP; 2.21A {Homo sapiens} PDB: 3v70_A*
Probab=98.41 E-value=1.9e-07 Score=50.02 Aligned_cols=22 Identities=27% Similarity=0.170 Sum_probs=20.2
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|.+|+|||||++.+.+..
T Consensus 24 I~lvG~~g~GKSSlin~l~~~~ 45 (247)
T 3lxw_A 24 LILVGRTGAGKSATGNSILGQR 45 (247)
T ss_dssp EEEESSTTSSHHHHHHHHHTSC
T ss_pred EEEECCCCCcHHHHHHHHhCCC
Confidence 6899999999999999998864
No 265
>2ygr_A Uvrabc system protein A; hydrolase, nucleotide excision repair; 3.40A {Mycobacterium tuberculosis} PDB: 3zqj_A
Probab=98.41 E-value=5.5e-08 Score=60.47 Aligned_cols=19 Identities=37% Similarity=0.566 Sum_probs=17.4
Q ss_pred CeeEEcCCCCcHHHHHHHH
Q 044571 1 MEGLYGISCVGKTTLANFV 19 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i 19 (79)
+++|+|+||||||||++.|
T Consensus 670 ivaI~G~nGSGKSTLl~~i 688 (993)
T 2ygr_A 670 LTSVTGVSGSGKSTLVNDI 688 (993)
T ss_dssp EEEEECSTTSSHHHHHTTT
T ss_pred EEEEEcCCCCCHHHHHHHH
Confidence 4799999999999999985
No 266
>1aky_A Adenylate kinase; ATP:AMP phosphotransferase, myokinase, transferase (phosphotransferase); HET: AP5; 1.63A {Saccharomyces cerevisiae} SCOP: c.37.1.1 g.41.2.1 PDB: 2aky_A* 3aky_A* 1dvr_A*
Probab=98.41 E-value=1.7e-07 Score=49.19 Aligned_cols=22 Identities=27% Similarity=0.210 Sum_probs=19.5
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
+.|+|+.||||||+++.|...+
T Consensus 7 I~l~G~~GsGKsT~a~~La~~l 28 (220)
T 1aky_A 7 MVLIGPPGAGKGTQAPNLQERF 28 (220)
T ss_dssp EEEECCTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHc
Confidence 6789999999999999997654
No 267
>1ypw_A Transitional endoplasmic reticulum ATPase; AAA, P97/VCP, ERAD, CDC48; HET: ADP ANP; 3.50A {Mus musculus} PDB: 1oz4_A* 1yq0_A* 1yqi_A* 1r7r_A* 3cf2_A* 3cf1_A* 3cf3_A*
Probab=98.41 E-value=1.5e-07 Score=57.57 Aligned_cols=24 Identities=38% Similarity=0.393 Sum_probs=21.3
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhcc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLRQ 25 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~~ 25 (79)
+.|+||+|||||||+++|++....
T Consensus 241 vLL~Gp~GtGKTtLarala~~l~~ 264 (806)
T 1ypw_A 241 ILLYGPPGTGKTLIARAVANETGA 264 (806)
T ss_dssp EEECSCTTSSHHHHHHHHHHTTTC
T ss_pred EEEECcCCCCHHHHHHHHHHHcCC
Confidence 578999999999999999998654
No 268
>2xb4_A Adenylate kinase; ATP-binding, nucleotide-binding, transferase; HET: SRT; 1.80A {Desulfovibrio gigas} PDB: 3l0s_A* 3l0p_A*
Probab=98.41 E-value=1.7e-07 Score=49.37 Aligned_cols=23 Identities=26% Similarity=0.326 Sum_probs=19.7
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhh
Q 044571 1 MEGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++.|+|++||||||+++.|...+
T Consensus 2 ~I~l~G~~GsGKsT~a~~La~~l 24 (223)
T 2xb4_A 2 NILIFGPNGSGKGTQGNLVKDKY 24 (223)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHh
Confidence 36899999999999999997643
No 269
>4fcw_A Chaperone protein CLPB; AAA domain; HET: ADP; 2.35A {Thermus thermophilus} PDB: 4fcv_A* 4fd2_A* 4fct_A*
Probab=98.41 E-value=2e-07 Score=50.90 Aligned_cols=24 Identities=33% Similarity=0.300 Sum_probs=21.1
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhcc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLRQ 25 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~~ 25 (79)
+.|+||+|+||||+++++.+....
T Consensus 50 ~ll~G~~GtGKt~la~~la~~~~~ 73 (311)
T 4fcw_A 50 FLFLGPTGVGKTELAKTLAATLFD 73 (311)
T ss_dssp EEEESCSSSSHHHHHHHHHHHHHS
T ss_pred EEEECCCCcCHHHHHHHHHHHHcC
Confidence 568899999999999999988643
No 270
>1u8z_A RAS-related protein RAL-A; GNP, GTP, GMPPNP, GPPNHP, GDP, GTPase, signaling protein; HET: GDP; 1.50A {Saguinus oedipus} SCOP: c.37.1.8 PDB: 1u8y_A* 1u90_A* 1uad_A* 1zc3_A* 1zc4_A* 2kwi_A* 2ke5_A*
Probab=98.40 E-value=2.3e-07 Score=46.13 Aligned_cols=22 Identities=23% Similarity=0.095 Sum_probs=19.7
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++++|+.|+|||||++.+.+..
T Consensus 7 i~v~G~~~~GKssl~~~l~~~~ 28 (168)
T 1u8z_A 7 VIMVGSGGVGKSALTLQFMYDE 28 (168)
T ss_dssp EEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHHhCc
Confidence 6899999999999999998754
No 271
>3t1o_A Gliding protein MGLA; G domain containing protein, bacterial GTPase, bacterial POL motility, POLE localisation, alpha/beta protein; HET: GDP; 1.90A {Thermus thermophilus} PDB: 3t12_A* 3t1q_A* 3t1t_A* 3t1v_A*
Probab=98.40 E-value=2.5e-07 Score=47.19 Aligned_cols=23 Identities=26% Similarity=0.307 Sum_probs=20.3
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
++|+|++|+|||||++.+.+...
T Consensus 17 i~vvG~~~~GKssL~~~l~~~~~ 39 (198)
T 3t1o_A 17 IVYYGPGLSGKTTNLKWIYSKVP 39 (198)
T ss_dssp EEEECSTTSSHHHHHHHHHHTSC
T ss_pred EEEECCCCCCHHHHHHHHHhhcc
Confidence 68999999999999999988643
No 272
>1kao_A RAP2A; GTP-binding protein, small G protein, GDP, RAS; HET: GDP; 1.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 2rap_A* 3rap_R*
Probab=98.40 E-value=2.3e-07 Score=46.07 Aligned_cols=22 Identities=23% Similarity=0.152 Sum_probs=19.4
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++++|++|+|||||++.+.+..
T Consensus 6 i~v~G~~~~GKSsli~~l~~~~ 27 (167)
T 1kao_A 6 VVVLGSGGVGKSALTVQFVTGT 27 (167)
T ss_dssp EEEECCTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHHcCC
Confidence 6899999999999999987653
No 273
>1z08_A RAS-related protein RAB-21; RAB GTPase, vesicular trafficking, protein transport; HET: GNP; 1.80A {Homo sapiens} SCOP: c.37.1.8 PDB: 2ot3_B 1yzu_A* 1z0i_A 1yzt_A*
Probab=98.40 E-value=2.3e-07 Score=46.34 Aligned_cols=22 Identities=36% Similarity=0.397 Sum_probs=19.6
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++++|++|+|||||++.+.+..
T Consensus 9 i~v~G~~~~GKssli~~l~~~~ 30 (170)
T 1z08_A 9 VVLLGEGCVGKTSLVLRYCENK 30 (170)
T ss_dssp EEEECCTTSCHHHHHHHHHHCC
T ss_pred EEEECcCCCCHHHHHHHHHcCC
Confidence 6899999999999999998653
No 274
>2erx_A GTP-binding protein DI-RAS2; GTP hydrolysis, transport protein; HET: GDP; 1.65A {Homo sapiens} SCOP: c.37.1.8
Probab=98.40 E-value=2.2e-07 Score=46.38 Aligned_cols=21 Identities=24% Similarity=0.325 Sum_probs=19.2
Q ss_pred eeEEcCCCCcHHHHHHHHHhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQ 22 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~ 22 (79)
++++|+.|+|||||++.+.+.
T Consensus 6 i~v~G~~~~GKssli~~l~~~ 26 (172)
T 2erx_A 6 VAVFGAGGVGKSSLVLRFVKG 26 (172)
T ss_dssp EEEECCTTSSHHHHHHHHHTC
T ss_pred EEEECCCCCCHHHHHHHHHcC
Confidence 689999999999999999874
No 275
>2ga8_A Hypothetical 39.9 kDa protein; YFR007W, YFH7, unknown function; HET: CME; 1.77A {Saccharomyces cerevisiae} PDB: 2gaa_A*
Probab=98.40 E-value=2.2e-07 Score=52.33 Aligned_cols=23 Identities=26% Similarity=0.239 Sum_probs=20.5
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
+.|+|++|+||||++++|.+.+.
T Consensus 27 i~l~G~~G~GKTTl~~~la~~l~ 49 (359)
T 2ga8_A 27 VILVGSPGSGKSTIAEELCQIIN 49 (359)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHH
T ss_pred EEEECCCCCcHHHHHHHHHHHhC
Confidence 67999999999999999988753
No 276
>2dby_A GTP-binding protein; GDP, structural genomics, NPPSFA, natio project on protein structural and functional analyses; HET: GDP; 1.76A {Thermus thermophilus} PDB: 2dwq_A
Probab=98.40 E-value=2e-07 Score=52.68 Aligned_cols=22 Identities=36% Similarity=0.495 Sum_probs=20.5
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|++|+|||||++.+.+..
T Consensus 4 v~IVG~pnvGKSTL~n~L~~~~ 25 (368)
T 2dby_A 4 VGIVGLPNVGKSTLFNALTRAN 25 (368)
T ss_dssp EEEECCSSSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHhCCC
Confidence 7999999999999999999874
No 277
>1ky3_A GTP-binding protein YPT7P; vesicular traffic, GTP hydrolysis, YPT/RAB protein, endocytosis, hydrolase, endocytosis/exocytosis complex; HET: GDP; 1.35A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 1ky2_A*
Probab=98.40 E-value=2.3e-07 Score=46.74 Aligned_cols=22 Identities=36% Similarity=0.246 Sum_probs=19.5
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++++|++|+|||||++.+.+..
T Consensus 11 i~v~G~~~~GKSsli~~l~~~~ 32 (182)
T 1ky3_A 11 VIILGDSGVGKTSLMHRYVNDK 32 (182)
T ss_dssp EEEECCTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHHhCc
Confidence 6899999999999999987754
No 278
>3b9p_A CG5977-PA, isoform A; AAA ATPase, ATP-binding, nucleotide-binding, hydrolase; 2.70A {Drosophila melanogaster}
Probab=98.39 E-value=2.3e-07 Score=50.51 Aligned_cols=23 Identities=35% Similarity=0.319 Sum_probs=20.2
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
+.|.||+|+||||+++.+.+...
T Consensus 57 vll~Gp~GtGKT~la~~la~~~~ 79 (297)
T 3b9p_A 57 LLLFGPPGNGKTLLARAVATECS 79 (297)
T ss_dssp EEEESSSSSCHHHHHHHHHHHTT
T ss_pred EEEECcCCCCHHHHHHHHHHHhC
Confidence 45889999999999999998754
No 279
>1z0j_A RAB-22, RAS-related protein RAB-22A; RAB GTPase, RAB22 GTPase, rabenosyn, endosomal trafficking; HET: GTP; 1.32A {Mus musculus} SCOP: c.37.1.8 PDB: 1yvd_A*
Probab=98.39 E-value=2.5e-07 Score=46.20 Aligned_cols=22 Identities=23% Similarity=0.160 Sum_probs=19.9
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++++|+.|+|||||++.+.+..
T Consensus 9 i~v~G~~~~GKSsli~~l~~~~ 30 (170)
T 1z0j_A 9 VCLLGDTGVGKSSIMWRFVEDS 30 (170)
T ss_dssp EEEECCTTSSHHHHHHHHHHSC
T ss_pred EEEECcCCCCHHHHHHHHHcCC
Confidence 6899999999999999998765
No 280
>1c1y_A RAS-related protein RAP-1A; GTP-binding proteins, protein-protein complex, effectors, signaling protein; HET: GTP; 1.90A {Homo sapiens} SCOP: c.37.1.8 PDB: 3kuc_A* 1gua_A* 3cf6_R* 3brw_D*
Probab=98.39 E-value=2.6e-07 Score=46.01 Aligned_cols=22 Identities=23% Similarity=0.203 Sum_probs=19.5
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++++|++|+|||||++.+.+..
T Consensus 6 i~v~G~~~~GKssli~~l~~~~ 27 (167)
T 1c1y_A 6 LVVLGSGGVGKSALTVQFVQGI 27 (167)
T ss_dssp EEEECSTTSSHHHHHHHHHHCC
T ss_pred EEEECCCCCCHHHHHHHHHcCC
Confidence 6899999999999999998753
No 281
>1wms_A RAB-9, RAB9, RAS-related protein RAB-9A; GTPase, protein transport; HET: GDP; 1.25A {Homo sapiens} SCOP: c.37.1.8 PDB: 1s8f_A* 1yzl_A* 2ocb_A*
Probab=98.39 E-value=2.5e-07 Score=46.54 Aligned_cols=22 Identities=32% Similarity=0.208 Sum_probs=19.6
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|++|+|||||++.+.+..
T Consensus 10 i~v~G~~~~GKSsli~~l~~~~ 31 (177)
T 1wms_A 10 VILLGDGGVGKSSLMNRYVTNK 31 (177)
T ss_dssp EEEECCTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHHcCC
Confidence 6899999999999999998653
No 282
>1ek0_A Protein (GTP-binding protein YPT51); vesicular traffic, GTP hydrolysis, YPT/RAB protein, endocytosis, hydrolase; HET: MHO GNP GDP; 1.48A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=98.39 E-value=2.6e-07 Score=46.06 Aligned_cols=22 Identities=23% Similarity=0.164 Sum_probs=19.6
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++++|+.|+|||||++.+.+..
T Consensus 6 i~v~G~~~~GKssli~~l~~~~ 27 (170)
T 1ek0_A 6 LVLLGEAAVGKSSIVLRFVSND 27 (170)
T ss_dssp EEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHhcCC
Confidence 6899999999999999998754
No 283
>2qby_A CDC6 homolog 1, cell division control protein 6 homolog 1; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus}
Probab=98.39 E-value=2.3e-07 Score=51.74 Aligned_cols=24 Identities=33% Similarity=0.580 Sum_probs=21.4
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhcc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLRQ 25 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~~ 25 (79)
+.|+||+|+|||||++.+.+....
T Consensus 48 vli~G~~G~GKTtl~~~l~~~~~~ 71 (386)
T 2qby_A 48 IFIYGLTGTGKTAVVKFVLSKLHK 71 (386)
T ss_dssp EEEEECTTSSHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHHH
Confidence 678999999999999999987654
No 284
>3a4m_A L-seryl-tRNA(SEC) kinase; P-loop motif, walker A motif, ATP binding motif, ATP- binding, nucleotide-binding, transferase; HET: ADP; 1.79A {Methanocaldococcus jannaschii} PDB: 3a4l_A* 3a4n_A 3am1_A* 3add_A* 3adc_A* 3adb_A*
Probab=98.39 E-value=1.8e-07 Score=50.41 Aligned_cols=21 Identities=29% Similarity=0.349 Sum_probs=19.1
Q ss_pred eeEEcCCCCcHHHHHHHHHhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQ 22 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~ 22 (79)
+.|+|++||||||+++.+...
T Consensus 7 Ivl~G~pGSGKSTla~~La~~ 27 (260)
T 3a4m_A 7 IILTGLPGVGKSTFSKNLAKI 27 (260)
T ss_dssp EEEECCTTSSHHHHHHHHHHH
T ss_pred EEEEcCCCCCHHHHHHHHHHH
Confidence 678999999999999999865
No 285
>2ohf_A Protein OLA1, GTP-binding protein 9; ATPase, GTPase, P-loop, OBG-like, hydrolase; HET: ACP; 2.70A {Homo sapiens}
Probab=98.39 E-value=1.9e-07 Score=53.22 Aligned_cols=21 Identities=38% Similarity=0.621 Sum_probs=19.3
Q ss_pred eeEEcCCCCcHHHHHHHHHhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQ 22 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~ 22 (79)
++|+|.+|+|||||++.+.+.
T Consensus 25 vgIVG~pnvGKSTL~n~Ltg~ 45 (396)
T 2ohf_A 25 IGIVGLPNVGKSTFFNVLTNS 45 (396)
T ss_dssp EEEECCSSSSHHHHHHHHHC-
T ss_pred EEEECCCCCCHHHHHHHHHCC
Confidence 789999999999999999987
No 286
>1svi_A GTP-binding protein YSXC; ENGB, GTPase, GDP, hydrolase; HET: GDP; 1.95A {Bacillus subtilis} SCOP: c.37.1.8 PDB: 1sul_A* 1svw_A*
Probab=98.39 E-value=2.1e-07 Score=47.62 Aligned_cols=22 Identities=36% Similarity=0.351 Sum_probs=19.4
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|+.|+|||||++.+.+..
T Consensus 26 i~v~G~~~~GKSsli~~l~~~~ 47 (195)
T 1svi_A 26 IALAGRSNVGKSSFINSLINRK 47 (195)
T ss_dssp EEEEEBTTSSHHHHHHHHHTC-
T ss_pred EEEECCCCCCHHHHHHHHhCCC
Confidence 6899999999999999998763
No 287
>3q85_A GTP-binding protein REM 2; G-domain, CAV2 beta, signaling protein; HET: GNP; 1.76A {Mus musculus} SCOP: c.37.1.8 PDB: 4aii_A*
Probab=98.39 E-value=2.3e-07 Score=46.34 Aligned_cols=21 Identities=48% Similarity=0.460 Sum_probs=18.9
Q ss_pred eeEEcCCCCcHHHHHHHHHhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQ 22 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~ 22 (79)
++++|++|+|||||++.+.+.
T Consensus 5 i~ivG~~~~GKSsli~~l~~~ 25 (169)
T 3q85_A 5 VMLVGESGVGKSTLAGTFGGL 25 (169)
T ss_dssp EEEECSTTSSHHHHHHHHHCC
T ss_pred EEEECCCCCCHHHHHHHHHhc
Confidence 689999999999999999754
No 288
>3q72_A GTP-binding protein RAD; G-domain, CAV2 beta, signaling protein; HET: GNP; 1.66A {Homo sapiens} SCOP: c.37.1.8 PDB: 3q7p_A* 3q7q_A* 2gjs_A* 2dpx_A*
Probab=98.39 E-value=1.5e-07 Score=46.91 Aligned_cols=22 Identities=36% Similarity=0.421 Sum_probs=19.2
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++++|++|+|||||++.+.+..
T Consensus 5 i~~vG~~~~GKSsli~~l~~~~ 26 (166)
T 3q72_A 5 VLLLGAPGVGKSALARIFGGVE 26 (166)
T ss_dssp EEEEESTTSSHHHHHHHHCCC-
T ss_pred EEEECCCCCCHHHHHHHHcCcc
Confidence 6899999999999999997654
No 289
>1g16_A RAS-related protein SEC4; G protein RAB, signaling protein, endocytosis/exocytosis complex; HET: GDP; 1.80A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 1g17_A* 2ocy_C 2eqb_A
Probab=98.39 E-value=2.4e-07 Score=46.23 Aligned_cols=22 Identities=32% Similarity=0.113 Sum_probs=19.6
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++++|++|+|||||++.+.+..
T Consensus 6 i~v~G~~~~GKssli~~l~~~~ 27 (170)
T 1g16_A 6 ILLIGDSGVGKSCLLVRFVEDK 27 (170)
T ss_dssp EEEEESTTSSHHHHHHHHHHCC
T ss_pred EEEECcCCCCHHHHHHHHHhCC
Confidence 6899999999999999998653
No 290
>1m2o_B GTP-binding protein SAR1, GTP binding protein; zinc-finger, beta barrel, VWA domain, gelsolin domain,; HET: GNP; 2.50A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 2qtv_B*
Probab=98.38 E-value=2.4e-07 Score=47.53 Aligned_cols=21 Identities=33% Similarity=0.458 Sum_probs=19.2
Q ss_pred eeEEcCCCCcHHHHHHHHHhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQ 22 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~ 22 (79)
++++|++|+|||||++.+.+.
T Consensus 26 i~~vG~~~vGKSsli~~l~~~ 46 (190)
T 1m2o_B 26 LLFLGLDNAGKTTLLHMLKND 46 (190)
T ss_dssp EEEEESTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHhcC
Confidence 689999999999999999873
No 291
>1e4v_A Adenylate kinase; transferase(phosphotransferase); HET: AP5; 1.85A {Escherichia coli} SCOP: c.37.1.1 g.41.2.1 PDB: 1e4y_A* 1ake_A* 1ank_A* 2eck_A* 3hpq_A* 4ake_A 3hpr_A*
Probab=98.38 E-value=2.5e-07 Score=48.39 Aligned_cols=22 Identities=32% Similarity=0.377 Sum_probs=19.3
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
+.|+|+.||||||+++.|...+
T Consensus 3 I~l~G~~GsGKsT~a~~L~~~~ 24 (214)
T 1e4v_A 3 IILLGAPVAGKGTQAQFIMEKY 24 (214)
T ss_dssp EEEEESTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHh
Confidence 6899999999999999997643
No 292
>3bos_A Putative DNA replication factor; P-loop containing nucleoside triphosphate hydrolases, struct genomics; HET: MSE CDP; 1.75A {Shewanella amazonensis} PDB: 3sc3_A
Probab=98.38 E-value=2.8e-07 Score=48.43 Aligned_cols=23 Identities=22% Similarity=0.185 Sum_probs=20.1
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
+.|+||+|+||||+++.+.....
T Consensus 55 ~ll~G~~G~GKT~la~~l~~~~~ 77 (242)
T 3bos_A 55 IYLWGPVKSGRTHLIHAACARAN 77 (242)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHH
Confidence 56899999999999999987654
No 293
>3pqc_A Probable GTP-binding protein ENGB; rossmann fold, GTPase, cell cycle, hydrolase; HET: GDP; 1.90A {Thermotoga maritima} PDB: 3pr1_A
Probab=98.38 E-value=2.2e-07 Score=47.35 Aligned_cols=22 Identities=36% Similarity=0.371 Sum_probs=20.0
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|+.|+|||||++.+.+..
T Consensus 26 i~v~G~~~~GKSsli~~l~~~~ 47 (195)
T 3pqc_A 26 VAFVGRSNVGKSSLLNALFNRK 47 (195)
T ss_dssp EEEEEBTTSSHHHHHHHHHTSC
T ss_pred EEEECCCCCCHHHHHHHHHcCc
Confidence 6899999999999999998864
No 294
>2fn4_A P23, RAS-related protein R-RAS; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GDP; 1.65A {Homo sapiens} SCOP: c.37.1.8 PDB: 2ery_A*
Probab=98.38 E-value=2.5e-07 Score=46.60 Aligned_cols=21 Identities=24% Similarity=0.099 Sum_probs=19.3
Q ss_pred eeEEcCCCCcHHHHHHHHHhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQ 22 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~ 22 (79)
++|+|.+|+|||||++.+.+.
T Consensus 12 i~v~G~~~~GKssli~~l~~~ 32 (181)
T 2fn4_A 12 LVVVGGGGVGKSALTIQFIQS 32 (181)
T ss_dssp EEEEECTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHhC
Confidence 689999999999999999876
No 295
>1fzq_A ADP-ribosylation factor-like protein 3; protein-GDP complex without magnesium, ARF family, RAS superfamily, G-domain, signaling protein; HET: MES GDP; 1.70A {Mus musculus} SCOP: c.37.1.8 PDB: 3bh7_A* 3bh6_A*
Probab=98.38 E-value=1.6e-07 Score=47.80 Aligned_cols=21 Identities=33% Similarity=0.411 Sum_probs=19.4
Q ss_pred eeEEcCCCCcHHHHHHHHHhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQ 22 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~ 22 (79)
++++|++|+|||||++.+.+.
T Consensus 19 i~ivG~~~vGKSsL~~~l~~~ 39 (181)
T 1fzq_A 19 ILLLGLDNAGKTTLLKQLASE 39 (181)
T ss_dssp EEEEESTTSSHHHHHHHHCCS
T ss_pred EEEECCCCCCHHHHHHHHhcC
Confidence 689999999999999999876
No 296
>2lkc_A Translation initiation factor IF-2; NMR {Geobacillus stearothermophilus} PDB: 2lkd_A*
Probab=98.37 E-value=2.8e-07 Score=46.39 Aligned_cols=21 Identities=29% Similarity=0.300 Sum_probs=19.1
Q ss_pred eeEEcCCCCcHHHHHHHHHhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQ 22 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~ 22 (79)
++|+|++|+|||||++.+.+.
T Consensus 11 i~v~G~~~~GKssl~~~l~~~ 31 (178)
T 2lkc_A 11 VTIMGHVDHGKTTLLDAIRHS 31 (178)
T ss_dssp EEEESCTTTTHHHHHHHHHTT
T ss_pred EEEECCCCCCHHHHHHHHhCC
Confidence 689999999999999999774
No 297
>1l8q_A Chromosomal replication initiator protein DNAA; AAA+, helix-turn-helix, nucleotide-binding, DNA binding, REP initiation, DNA binding protein; HET: ADP; 2.70A {Aquifex aeolicus} SCOP: a.4.12.2 c.37.1.20 PDB: 3r8f_A* 2hcb_A*
Probab=98.37 E-value=2.7e-07 Score=50.92 Aligned_cols=24 Identities=33% Similarity=0.458 Sum_probs=20.9
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhcc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLRQ 25 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~~ 25 (79)
+.|+||+|+|||||++.+.+....
T Consensus 40 lll~G~~GtGKT~la~~i~~~~~~ 63 (324)
T 1l8q_A 40 IFIYGSVGTGKTHLLQAAGNEAKK 63 (324)
T ss_dssp EEEECSSSSSHHHHHHHHHHHHHH
T ss_pred EEEECCCCCcHHHHHHHHHHHHHH
Confidence 568999999999999999987643
No 298
>3t5d_A Septin-7; GTP-binding protein, cytoskeleton, signaling protein; HET: GDP; 3.30A {Homo sapiens} PDB: 3tw4_A*
Probab=98.37 E-value=1.7e-07 Score=50.75 Aligned_cols=21 Identities=33% Similarity=0.191 Sum_probs=18.9
Q ss_pred eeEEcCCCCcHHHHHHHHHhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQ 22 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~ 22 (79)
++|+|.+|+|||||++.|++.
T Consensus 11 I~vvG~~g~GKSTLin~L~~~ 31 (274)
T 3t5d_A 11 LMVVGESGLGKSTLINSLFLT 31 (274)
T ss_dssp EEEEECTTSSHHHHHHHHSSS
T ss_pred EEEECCCCCCHHHHHHHHhCC
Confidence 689999999999999998764
No 299
>1jbk_A CLPB protein; beta barrel, chaperone; 1.80A {Escherichia coli} SCOP: c.37.1.20
Probab=98.37 E-value=3.2e-07 Score=46.49 Aligned_cols=24 Identities=25% Similarity=0.311 Sum_probs=20.5
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhcc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLRQ 25 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~~ 25 (79)
+.|+|++|+||||+++.+......
T Consensus 46 ~ll~G~~G~GKT~l~~~~~~~~~~ 69 (195)
T 1jbk_A 46 PVLIGEPGVGKTAIVEGLAQRIIN 69 (195)
T ss_dssp EEEECCTTSCHHHHHHHHHHHHHH
T ss_pred eEEECCCCCCHHHHHHHHHHHHHh
Confidence 468899999999999999887643
No 300
>1f6b_A SAR1; gtpases, N-terminal helix, Mg-containing complex, protein transport; HET: GDP; 1.70A {Cricetulus griseus} SCOP: c.37.1.8 PDB: 2fmx_A* 2fa9_A* 2gao_A*
Probab=98.37 E-value=1.4e-07 Score=48.69 Aligned_cols=21 Identities=29% Similarity=0.450 Sum_probs=18.9
Q ss_pred eeEEcCCCCcHHHHHHHHHhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQ 22 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~ 22 (79)
++++|++|+|||||++.+.+.
T Consensus 28 i~lvG~~~vGKSsLi~~l~~~ 48 (198)
T 1f6b_A 28 LVFLGLDNAGKTTLLHMLKDD 48 (198)
T ss_dssp EEEEEETTSSHHHHHHHHSCC
T ss_pred EEEECCCCCCHHHHHHHHhcC
Confidence 689999999999999999763
No 301
>2oil_A CATX-8, RAS-related protein RAB-25; G-protein, GDP, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 2.30A {Homo sapiens}
Probab=98.36 E-value=3.2e-07 Score=46.93 Aligned_cols=22 Identities=36% Similarity=0.246 Sum_probs=19.7
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|++|+|||||++.+.+..
T Consensus 28 i~v~G~~~~GKSsLi~~l~~~~ 49 (193)
T 2oil_A 28 VVLIGESGVGKTNLLSRFTRNE 49 (193)
T ss_dssp EEEESSTTSSHHHHHHHHHHSC
T ss_pred EEEECcCCCCHHHHHHHHhcCC
Confidence 6899999999999999998753
No 302
>2r6f_A Excinuclease ABC subunit A; UVRA, nucleotide excision repair, DNA repair, ABC ATPase, at cassette, DNA damage, DNA excision; HET: ADP; 3.20A {Geobacillus stearothermophilus} PDB: 3uwx_A
Probab=98.36 E-value=5.9e-08 Score=60.20 Aligned_cols=20 Identities=40% Similarity=0.431 Sum_probs=17.7
Q ss_pred CeeEEcCCCCcHHHHHHHHH
Q 044571 1 MEGLYGISCVGKTTLANFVG 20 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~ 20 (79)
+++|+|+||||||||++.+.
T Consensus 652 iv~I~G~nGSGKSTLl~~ll 671 (972)
T 2r6f_A 652 FVAVTGVSGSGKSTLVNEVL 671 (972)
T ss_dssp EEECCBCTTSSHHHHHTTTH
T ss_pred EEEEEcCCCCCHHHHHHHHH
Confidence 47899999999999999853
No 303
>4dsu_A GTPase KRAS, isoform 2B; small G-protein, signaling, hydrolase; HET: GDP; 1.70A {Homo sapiens} PDB: 4dsn_A* 4dst_A* 4dso_A*
Probab=98.36 E-value=3.3e-07 Score=46.52 Aligned_cols=22 Identities=23% Similarity=0.157 Sum_probs=19.8
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|+.|+|||||++.+.+..
T Consensus 7 i~v~G~~~~GKSsli~~l~~~~ 28 (189)
T 4dsu_A 7 LVVVGADGVGKSALTIQLIQNH 28 (189)
T ss_dssp EEEECCTTSSHHHHHHHHHHSS
T ss_pred EEEECCCCCCHHHHHHHHHhCC
Confidence 6899999999999999998754
No 304
>1r2q_A RAS-related protein RAB-5A; GTPase, GNP, atomic resolution, protein transport; HET: GNP; 1.05A {Homo sapiens} SCOP: c.37.1.8 PDB: 1n6h_A* 1tu4_A* 1tu3_A* 1n6k_A* 1n6i_A* 1n6l_A* 1n6o_A* 1n6p_A* 1n6n_A* 1n6r_A* 3mjh_A* 1z0d_A* 1huq_A* 2hei_A* 1z07_A*
Probab=98.36 E-value=3.4e-07 Score=45.63 Aligned_cols=21 Identities=33% Similarity=0.243 Sum_probs=19.0
Q ss_pred eeEEcCCCCcHHHHHHHHHhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQ 22 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~ 22 (79)
++++|+.|+|||||++.+.+.
T Consensus 9 i~v~G~~~~GKssli~~l~~~ 29 (170)
T 1r2q_A 9 LVLLGESAVGKSSLVLRFVKG 29 (170)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHcC
Confidence 689999999999999999864
No 305
>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A
Probab=98.36 E-value=2.3e-07 Score=50.65 Aligned_cols=21 Identities=24% Similarity=0.042 Sum_probs=18.9
Q ss_pred eeEEcCCCCcHHHHHHHHHhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQ 22 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~ 22 (79)
+.|+|++||||||+++.+...
T Consensus 5 I~l~G~~GsGKST~a~~L~~~ 25 (301)
T 1ltq_A 5 ILTIGCPGSGKSTWAREFIAK 25 (301)
T ss_dssp EEEECCTTSSHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHh
Confidence 678999999999999999863
No 306
>1z6t_A APAF-1, apoptotic protease activating factor 1; caspase activation, ADP, nucleotide binding, CARD, apoptosis; HET: ADP; 2.21A {Homo sapiens}
Probab=98.36 E-value=2.3e-06 Score=50.48 Aligned_cols=40 Identities=23% Similarity=0.238 Sum_probs=30.2
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcc-cCCC-CcEEEEEecCC
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQ-EKIF-DEVGIATVSQD 40 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~-~~~~-~~~~~~~v~q~ 40 (79)
+++|+|+.|+|||||++.++..... ...| +...|..+.+.
T Consensus 149 ~v~I~G~~GiGKTtLa~~~~~~~~~~~~~f~~~v~wv~~~~~ 190 (591)
T 1z6t_A 149 WVTIHGMAGCGKSVLAAEAVRDHSLLEGCFPGGVHWVSVGKQ 190 (591)
T ss_dssp EEEEECCTTSSHHHHHHHHHCCHHHHHHHCTTCEEEEEEESC
T ss_pred eEEEEcCCCCCHHHHHHHHHhchhHHHhhCCCceEEEECCCC
Confidence 3689999999999999999765432 2335 46788888776
No 307
>2h92_A Cytidylate kinase; rossmann fold, transferase; HET: C5P PG4; 2.30A {Staphylococcus aureus}
Probab=98.36 E-value=3.8e-07 Score=47.69 Aligned_cols=23 Identities=35% Similarity=0.430 Sum_probs=20.3
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhh
Q 044571 1 MEGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~ 23 (79)
+++|+|++||||||+++.+...+
T Consensus 5 ~i~i~G~~gsGkst~~~~l~~~~ 27 (219)
T 2h92_A 5 NIALDGPAAAGKSTIAKRVASEL 27 (219)
T ss_dssp CEEEECCTTSSHHHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHHhc
Confidence 47899999999999999997753
No 308
>2cxx_A Probable GTP-binding protein ENGB; structural genomics, NPPSFA, national P protein structural and functional analyses; HET: GDP; 1.70A {Pyrococcus horikoshii} SCOP: c.37.1.8
Probab=98.36 E-value=2.5e-07 Score=47.01 Aligned_cols=22 Identities=32% Similarity=0.206 Sum_probs=19.8
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|++|+|||||++.+.+..
T Consensus 4 i~v~G~~~~GKSsli~~l~~~~ 25 (190)
T 2cxx_A 4 IIFAGRSNVGKSTLIYRLTGKK 25 (190)
T ss_dssp EEEEEBTTSSHHHHHHHHHSCC
T ss_pred EEEECCCCCCHHHHHHHHhCcC
Confidence 6899999999999999998764
No 309
>3con_A GTPase NRAS; structural genomics consortium, SGC, GDP, oncogene, disease mutation, golgi apparatus, GTP-binding, lipoprotein membrane, methylation; HET: GDP; 1.65A {Homo sapiens} PDB: 2pmx_A* 3gft_A* 4q21_A*
Probab=98.35 E-value=3.4e-07 Score=46.67 Aligned_cols=22 Identities=23% Similarity=0.155 Sum_probs=19.6
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++++|.+|+|||||++.+.+..
T Consensus 24 i~vvG~~~~GKSsli~~l~~~~ 45 (190)
T 3con_A 24 LVVVGAGGVGKSALTIQLIQNH 45 (190)
T ss_dssp EEEECSTTSSHHHHHHHHHHSS
T ss_pred EEEECcCCCCHHHHHHHHHcCC
Confidence 6899999999999999998753
No 310
>3bc1_A RAS-related protein RAB-27A; RAB27, GTPase, RAB, signaling protein, GDPNP, SLP2A, exophil GTP-binding, lipoprotein, membrane, methylation; HET: GNP; 1.80A {Mus musculus} PDB: 2iey_A* 2if0_A* 2zet_A*
Probab=98.35 E-value=3.4e-07 Score=46.55 Aligned_cols=22 Identities=27% Similarity=0.066 Sum_probs=19.5
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|++|+|||||++.+.+..
T Consensus 14 i~v~G~~~~GKSsli~~l~~~~ 35 (195)
T 3bc1_A 14 FLALGDSGVGKTSVLYQYTDGK 35 (195)
T ss_dssp EEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHhcCC
Confidence 6899999999999999998743
No 311
>3iby_A Ferrous iron transport protein B; G protein, G domain, iron uptake, cell inner membrane, cell GTP-binding, ION transport, membrane; 2.50A {Legionella pneumophila}
Probab=98.35 E-value=2.8e-07 Score=49.65 Aligned_cols=22 Identities=41% Similarity=0.314 Sum_probs=20.5
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++++|.+|+|||||++.+.|..
T Consensus 4 I~lvG~~n~GKSTL~n~L~g~~ 25 (256)
T 3iby_A 4 ALLIGNPNCGKTTLFNALTNAN 25 (256)
T ss_dssp EEEEESTTSSHHHHHHHHHTTS
T ss_pred EEEECCCCCCHHHHHHHHHCCC
Confidence 6899999999999999999874
No 312
>3tw8_B RAS-related protein RAB-35; longin domain, RAB GTPase, guanine exchange factor; 2.10A {Homo sapiens}
Probab=98.35 E-value=2.2e-07 Score=46.78 Aligned_cols=22 Identities=27% Similarity=0.197 Sum_probs=19.6
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|++|+|||||++.+.+..
T Consensus 12 i~v~G~~~~GKssl~~~l~~~~ 33 (181)
T 3tw8_B 12 LLIIGDSGVGKSSLLLRFADNT 33 (181)
T ss_dssp EEEECCTTSCHHHHHHHHCSCC
T ss_pred EEEECCCCCCHHHHHHHHhcCC
Confidence 6899999999999999997753
No 313
>3clv_A RAB5 protein, putative; malaria, GTPase, structural genomics, GTP-binding, nucleotide-binding, signaling protein; HET: GDP; 1.89A {Plasmodium falciparum}
Probab=98.35 E-value=3.5e-07 Score=46.79 Aligned_cols=22 Identities=27% Similarity=0.317 Sum_probs=19.9
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|+.|+|||||++.+.+..
T Consensus 10 i~v~G~~~~GKSsli~~l~~~~ 31 (208)
T 3clv_A 10 TVLLGESSVGKSSIVLRLTKDT 31 (208)
T ss_dssp EEEECCTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHHhCc
Confidence 6899999999999999998863
No 314
>3iev_A GTP-binding protein ERA; ERA, GTPase, KH domain, anti-SD, 16S rRNA, 30S ribosome ASSE GTP-binding, nucleotide-binding; HET: GNP; 1.90A {Aquifex aeolicus} PDB: 3r9w_A* 3r9x_A*
Probab=98.35 E-value=2.5e-07 Score=50.97 Aligned_cols=23 Identities=30% Similarity=0.286 Sum_probs=20.8
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhh
Q 044571 1 MEGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~ 23 (79)
+++|+|.+|+|||||++.+.|..
T Consensus 12 ~v~ivG~~nvGKSTLin~l~g~~ 34 (308)
T 3iev_A 12 YVAIVGKPNVGKSTLLNNLLGTK 34 (308)
T ss_dssp EEEEECSTTSSHHHHHHHHHTSC
T ss_pred EEEEECCCCCcHHHHHHHHhCCC
Confidence 47999999999999999999864
No 315
>1r8s_A ADP-ribosylation factor 1; protein transport/exchange factor, protein transport-exchang complex; HET: GDP; 1.46A {Bos taurus} SCOP: c.37.1.8 PDB: 1re0_A* 1s9d_A* 1u81_A* 1r8q_A* 1rrf_A* 1rrg_A* 1hur_A* 1o3y_A* 1j2j_A* 2j59_A* 1mr3_F* 2k5u_A* 3lrp_A* 3tjz_A* 3rd1_A* 2ksq_A* 2a5d_A* 2a5f_A* 2j5x_A* 1e0s_A* ...
Probab=98.35 E-value=3.8e-07 Score=45.36 Aligned_cols=22 Identities=23% Similarity=0.164 Sum_probs=19.4
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++++|++|+|||||++.+.+..
T Consensus 3 i~~~G~~~~GKssl~~~l~~~~ 24 (164)
T 1r8s_A 3 ILMVGLDAAGKTTILYKLKLGE 24 (164)
T ss_dssp EEEECSTTSSHHHHHHHHHHHC
T ss_pred EEEECCCCCCHHHHHHHHHcCC
Confidence 6899999999999999997643
No 316
>4ad8_A DNA repair protein RECN; DNA binding protein, ATPase domain; HET: DNA; 4.00A {Deinococcus radiodurans}
Probab=98.35 E-value=5e-08 Score=56.98 Aligned_cols=21 Identities=19% Similarity=0.294 Sum_probs=19.2
Q ss_pred eeEEcCCCCcHHHHHHHHHhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQ 22 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~ 22 (79)
.+|+|+||+|||||+.+|...
T Consensus 63 n~i~G~NGaGKS~lleAl~~l 83 (517)
T 4ad8_A 63 CAFTGETGAGKSIIVDALGLL 83 (517)
T ss_dssp EEEEESHHHHHHHHTHHHHHH
T ss_pred EEEEcCCCCCHHHHHHHHHHH
Confidence 579999999999999999766
No 317
>1upt_A ARL1, ADP-ribosylation factor-like protein 1; hydrolase/protein-binding, complex (GTPase/golgin), golgin-245, GRIP, golgin, GTPase, G-protein; HET: GTP; 1.7A {Homo sapiens} SCOP: c.37.1.8 PDB: 1r4a_A*
Probab=98.34 E-value=3.8e-07 Score=45.58 Aligned_cols=21 Identities=24% Similarity=0.210 Sum_probs=19.0
Q ss_pred eeEEcCCCCcHHHHHHHHHhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQ 22 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~ 22 (79)
++++|++|+|||||++.+.+.
T Consensus 10 i~v~G~~~~GKssl~~~l~~~ 30 (171)
T 1upt_A 10 ILILGLDGAGKTTILYRLQVG 30 (171)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHhcC
Confidence 689999999999999999764
No 318
>2hxs_A RAB-26, RAS-related protein RAB-28; GTPase, signaling protein; HET: G3D; 1.10A {Homo sapiens} PDB: 2hy4_A* 3e5h_A*
Probab=98.34 E-value=3.9e-07 Score=45.86 Aligned_cols=22 Identities=23% Similarity=0.279 Sum_probs=19.6
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|++|+|||||++.+.+..
T Consensus 9 i~v~G~~~~GKssl~~~l~~~~ 30 (178)
T 2hxs_A 9 IVVLGDGASGKTSLTTCFAQET 30 (178)
T ss_dssp EEEECCTTSSHHHHHHHHHGGG
T ss_pred EEEECcCCCCHHHHHHHHHhCc
Confidence 6899999999999999998653
No 319
>1wf3_A GTP-binding protein; GTPase, riken structural genomics/prote initiative, RSGI, structural genomics, hydrolase; HET: GNP; 1.88A {Thermus thermophilus} SCOP: c.37.1.8 d.52.3.1
Probab=98.34 E-value=3.4e-07 Score=50.41 Aligned_cols=22 Identities=32% Similarity=0.279 Sum_probs=20.2
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|.+|+|||||++.+.+..
T Consensus 10 V~ivG~~nvGKSTLln~l~g~~ 31 (301)
T 1wf3_A 10 VAIVGKPNVGKSTLLNNLLGVK 31 (301)
T ss_dssp EEEECSTTSSHHHHHHHHHTSC
T ss_pred EEEECCCCCCHHHHHHHHhCCc
Confidence 7899999999999999999863
No 320
>3ihw_A Centg3; RAS, centaurin, GTPase, structural genomics, structural genomics consortium, SGC, alternative splicing, ANK repeat, cytoplasm, GTP-binding; 1.92A {Homo sapiens} SCOP: c.37.1.0
Probab=98.34 E-value=3.8e-07 Score=46.58 Aligned_cols=21 Identities=24% Similarity=0.243 Sum_probs=18.1
Q ss_pred eeEEcCCCCcHHHHHHHHHhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQ 22 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~ 22 (79)
++|+|.+|+|||||++.+.+.
T Consensus 23 i~ivG~~~vGKSsL~~~~~~~ 43 (184)
T 3ihw_A 23 VGIVGNLSSGKSALVHRYLTG 43 (184)
T ss_dssp EEEECCTTSCHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHhcC
Confidence 689999999999999776654
No 321
>2ffh_A Protein (FFH); SRP54, signal recognition particle, GTPase, M domain, RNA-binding, signal sequence-binding, helix-turn-helix, protein targeting; 3.20A {Thermus aquaticus} SCOP: a.24.13.1 a.36.1.1 c.37.1.10 PDB: 2iy3_A
Probab=98.34 E-value=2.9e-07 Score=52.88 Aligned_cols=26 Identities=27% Similarity=0.202 Sum_probs=23.1
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhccc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQE 26 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~ 26 (79)
+++++|++|+||||++..+.+.+.+.
T Consensus 100 vi~i~G~~GsGKTT~~~~LA~~l~~~ 125 (425)
T 2ffh_A 100 LWFLVGLQGSGKTTTAAKLALYYKGK 125 (425)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHTT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHc
Confidence 36789999999999999999998764
No 322
>3crm_A TRNA delta(2)-isopentenylpyrophosphate transferase; ATP-binding, nucleotide-binding, nucleotidyltransferase, tRNA processing; 1.90A {Pseudomonas aeruginosa} PDB: 3crq_A 3crr_A
Probab=98.33 E-value=3.1e-07 Score=51.09 Aligned_cols=23 Identities=35% Similarity=0.343 Sum_probs=20.4
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
+.|+||+||||||+.+.|...+.
T Consensus 8 i~i~GptGsGKTtla~~La~~l~ 30 (323)
T 3crm_A 8 IFLMGPTAAGKTDLAMALADALP 30 (323)
T ss_dssp EEEECCTTSCHHHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHHHHcC
Confidence 67999999999999999987654
No 323
>2dr3_A UPF0273 protein PH0284; RECA superfamily ATPase, hexamer, structural genomics; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=98.33 E-value=2.7e-07 Score=48.82 Aligned_cols=21 Identities=24% Similarity=0.034 Sum_probs=16.9
Q ss_pred eeEEcCCCCcHHHHHHHHHhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQ 22 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~ 22 (79)
+.|.|+||+|||||+..++..
T Consensus 26 ~~i~G~~GsGKTtl~~~~~~~ 46 (247)
T 2dr3_A 26 VLLSGGPGTGKTIFSQQFLWN 46 (247)
T ss_dssp EEEEECTTSSHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHH
Confidence 679999999999997655443
No 324
>1nrj_B SR-beta, signal recognition particle receptor beta subunit; transmembrane, endoplasmic reticulum, GTP-binding; HET: GTP; 1.70A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=98.33 E-value=4.1e-07 Score=47.38 Aligned_cols=22 Identities=23% Similarity=0.212 Sum_probs=19.8
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
+.++|++|+|||||++.+.+..
T Consensus 15 i~~~G~~g~GKTsl~~~l~~~~ 36 (218)
T 1nrj_B 15 IIIAGPQNSGKTSLLTLLTTDS 36 (218)
T ss_dssp EEEECSTTSSHHHHHHHHHHSS
T ss_pred EEEECCCCCCHHHHHHHHhcCC
Confidence 6799999999999999998764
No 325
>2y8e_A RAB-protein 6, GH09086P, RAB6; hydrolase, nucleotide binding, GTP binding; HET: GNP; 1.39A {Drosophila melanogaster} PDB: 3cwz_A* 1yzq_A* 2gil_A* 2e9s_A* 2fe4_A* 2ffq_A* 1d5c_A*
Probab=98.33 E-value=3.9e-07 Score=45.81 Aligned_cols=22 Identities=27% Similarity=0.181 Sum_probs=19.4
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|+.|+|||||++.+.+..
T Consensus 17 i~v~G~~~~GKssli~~l~~~~ 38 (179)
T 2y8e_A 17 LVFLGEQSVGKTSLITRFMYDS 38 (179)
T ss_dssp EEEEESTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHHcCC
Confidence 6899999999999999998643
No 326
>1z0f_A RAB14, member RAS oncogene family; RAB GTPase, vesicular trafficking, protein transport; HET: GDP; 2.15A {Homo sapiens} SCOP: c.37.1.8 PDB: 2aed_A* 4drz_A*
Probab=98.33 E-value=4.4e-07 Score=45.62 Aligned_cols=22 Identities=23% Similarity=0.142 Sum_probs=19.8
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|+.|+|||||++.+.+..
T Consensus 18 i~v~G~~~~GKSsli~~l~~~~ 39 (179)
T 1z0f_A 18 YIIIGDMGVGKSCLLHQFTEKK 39 (179)
T ss_dssp EEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHHcCC
Confidence 6799999999999999998764
No 327
>2z4s_A Chromosomal replication initiator protein DNAA; AAA+ ATPase, domain III (ATPase domain), ATP-binding, cytoplasm, DNA replication; HET: ADP; 3.00A {Thermotoga maritima} PDB: 2z4r_A*
Probab=98.33 E-value=3.8e-07 Score=52.50 Aligned_cols=23 Identities=35% Similarity=0.404 Sum_probs=20.5
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
+.|.||+|+|||||++++.+...
T Consensus 133 lll~Gp~G~GKTtLa~aia~~l~ 155 (440)
T 2z4s_A 133 LFIYGGVGLGKTHLLQSIGNYVV 155 (440)
T ss_dssp EEEECSSSSSHHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHH
Confidence 56899999999999999998763
No 328
>2xtp_A GTPase IMAP family member 2; immune system, G protein; HET: MSE; 1.50A {Homo sapiens} PDB: 2xto_A* 2xtm_A* 2xtn_A* 3p1j_A
Probab=98.33 E-value=3.4e-07 Score=49.05 Aligned_cols=22 Identities=23% Similarity=0.166 Sum_probs=20.0
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|++|+|||||++.+.+..
T Consensus 25 I~lvG~~g~GKStl~n~l~~~~ 46 (260)
T 2xtp_A 25 IILVGKTGTGKSAAGNSILRKQ 46 (260)
T ss_dssp EEEEECTTSCHHHHHHHHHTSC
T ss_pred EEEECCCCCCHHHHHHHHhCCC
Confidence 6899999999999999998764
No 329
>2a9k_A RAS-related protein RAL-A; bacterial ADP-ribosyltransferase, RAL, RHO, GD binding; HET: GDP NAD; 1.73A {Homo sapiens} SCOP: c.37.1.8 PDB: 2a78_A*
Probab=98.33 E-value=4.4e-07 Score=45.91 Aligned_cols=22 Identities=23% Similarity=0.095 Sum_probs=19.6
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|+.|+|||||++.+.+..
T Consensus 21 i~v~G~~~~GKSsli~~l~~~~ 42 (187)
T 2a9k_A 21 VIMVGSGGVGKSALTLQFMYDE 42 (187)
T ss_dssp EEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHhhCC
Confidence 6899999999999999998754
No 330
>2g6b_A RAS-related protein RAB-26; G-protein, GTP analogue, structural genomics, structural genomics consortium, SGC, unknown function; HET: GNP; 2.00A {Homo sapiens} SCOP: c.37.1.8
Probab=98.33 E-value=4.4e-07 Score=45.74 Aligned_cols=22 Identities=36% Similarity=0.185 Sum_probs=19.7
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++++|++|+|||||++.+.+..
T Consensus 13 i~v~G~~~~GKssli~~l~~~~ 34 (180)
T 2g6b_A 13 VMLVGDSGVGKTCLLVRFKDGA 34 (180)
T ss_dssp EEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEECcCCCCHHHHHHHHHhCC
Confidence 6899999999999999998754
No 331
>2bov_A RAla, RAS-related protein RAL-A; C3BOT, exoenzyme, RAla, GTPase, ribosylating toxin, GTP-binding, lipoprotein, prenylation; HET: GDP; 2.66A {Homo sapiens}
Probab=98.32 E-value=4.6e-07 Score=46.64 Aligned_cols=22 Identities=23% Similarity=0.095 Sum_probs=19.6
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|+.|+|||||++.+.+..
T Consensus 17 i~v~G~~~~GKSsli~~l~~~~ 38 (206)
T 2bov_A 17 VIMVGSGGVGKSALTLQFMYDE 38 (206)
T ss_dssp EEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHHhCC
Confidence 6899999999999999998654
No 332
>1m7b_A RND3/RHOE small GTP-binding protein; small GTPase, signaling protein; HET: GTP; 2.00A {Homo sapiens} SCOP: c.37.1.8 PDB: 2v55_B*
Probab=98.31 E-value=4.3e-07 Score=46.19 Aligned_cols=22 Identities=27% Similarity=0.231 Sum_probs=19.6
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++++|++|+|||||++.+.+..
T Consensus 10 i~v~G~~~vGKSsli~~l~~~~ 31 (184)
T 1m7b_A 10 IVVVGDSQCGKTALLHVFAKDC 31 (184)
T ss_dssp EEEEESTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHhcCC
Confidence 6799999999999999998753
No 333
>2efe_B Small GTP-binding protein-like; GEF, GTPase, VPS9, nucleotide, transport protein; HET: GNH; 2.08A {Arabidopsis thaliana} PDB: 2efd_B 2efc_B* 2efh_B*
Probab=98.31 E-value=4.8e-07 Score=45.64 Aligned_cols=22 Identities=23% Similarity=0.084 Sum_probs=19.6
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++++|+.|+|||||++.+.+..
T Consensus 15 i~v~G~~~~GKSsli~~l~~~~ 36 (181)
T 2efe_B 15 LVLLGDVGAGKSSLVLRFVKDQ 36 (181)
T ss_dssp EEEECCTTSCHHHHHHHHHHCC
T ss_pred EEEECcCCCCHHHHHHHHHcCC
Confidence 6899999999999999998753
No 334
>2bme_A RAB4A, RAS-related protein RAB4A; GTP-binding protein, vesicular transport, endocytosis, prenylation, protein transport, transport; HET: GNP; 1.57A {Homo sapiens} SCOP: c.37.1.8 PDB: 2bmd_A* 1yu9_A* 1z0k_A*
Probab=98.31 E-value=4.5e-07 Score=45.99 Aligned_cols=22 Identities=18% Similarity=0.060 Sum_probs=19.6
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|+.|+|||||++.+.+..
T Consensus 13 i~v~G~~~~GKSsli~~l~~~~ 34 (186)
T 2bme_A 13 FLVIGNAGTGKSCLLHQFIEKK 34 (186)
T ss_dssp EEEEESTTSSHHHHHHHHHHSS
T ss_pred EEEECCCCCCHHHHHHHHHcCC
Confidence 6899999999999999998654
No 335
>2ce7_A Cell division protein FTSH; metalloprotease; HET: ADP; 2.44A {Thermotoga maritima} SCOP: a.269.1.1 c.37.1.20 PDB: 2cea_A* 3kds_E*
Probab=98.31 E-value=4.2e-07 Score=52.89 Aligned_cols=23 Identities=35% Similarity=0.273 Sum_probs=20.3
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
+.|+||+|+|||||++++.+...
T Consensus 52 vLL~GppGtGKT~Laraia~~~~ 74 (476)
T 2ce7_A 52 ILLVGPPGTGKTLLARAVAGEAN 74 (476)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHHHcC
Confidence 45899999999999999998754
No 336
>1vg8_A RAS-related protein RAB-7; GTP-binding protein, protein transport; HET: GNP; 1.70A {Rattus norvegicus} SCOP: c.37.1.8 PDB: 1vg0_B* 3law_A* 1t91_A* 1yhn_A* 1vg1_A* 1vg9_B*
Probab=98.31 E-value=4.8e-07 Score=46.63 Aligned_cols=22 Identities=41% Similarity=0.303 Sum_probs=19.7
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|+.|+|||||++.+.+..
T Consensus 11 i~v~G~~~~GKSsli~~l~~~~ 32 (207)
T 1vg8_A 11 VIILGDSGVGKTSLMNQYVNKK 32 (207)
T ss_dssp EEEECCTTSSHHHHHHHHHHSC
T ss_pred EEEECcCCCCHHHHHHHHHcCC
Confidence 6899999999999999998754
No 337
>2e87_A Hypothetical protein PH1320; GTP-binding, GTPase, OBG, bundle, GDP, complex, structural G NPPSFA; HET: GDP; 2.35A {Pyrococcus horikoshii}
Probab=98.31 E-value=2.9e-07 Score=51.58 Aligned_cols=22 Identities=27% Similarity=0.241 Sum_probs=20.3
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++++|++|+|||||++.+.+..
T Consensus 170 v~lvG~~gvGKSTLin~L~~~~ 191 (357)
T 2e87_A 170 VVIAGHPNVGKSTLLKALTTAK 191 (357)
T ss_dssp EEEECSTTSSHHHHHHHHCSSC
T ss_pred EEEECCCCCCHHHHHHHHhCCC
Confidence 6899999999999999998865
No 338
>4ag6_A VIRB4 ATPase, type IV secretory pathway VIRB4 components-like P; hydrolase, type IV secretion, conjugation; 2.35A {Thermoanaerobacter pseudethanolicus} PDB: 4ag5_A
Probab=98.31 E-value=4.6e-07 Score=51.23 Aligned_cols=24 Identities=13% Similarity=-0.036 Sum_probs=20.8
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhcc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLRQ 25 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~~ 25 (79)
+.|+|++|+||||+++.+......
T Consensus 38 ~~i~G~~G~GKs~~~~~~~~~~~~ 61 (392)
T 4ag6_A 38 WTILAKPGAGKSFTAKMLLLREYM 61 (392)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHHT
T ss_pred eEEEcCCCCCHHHHHHHHHHHHHH
Confidence 578999999999999999887644
No 339
>3a1s_A Iron(II) transport protein B; FEOB, iron transporter, small GTPase, G protein, GDI; HET: GDP; 1.50A {Thermotoga maritima} PDB: 3a1t_A* 3a1u_A* 3a1v_A* 3a1w_A
Probab=98.30 E-value=4.6e-07 Score=48.83 Aligned_cols=22 Identities=36% Similarity=0.363 Sum_probs=20.2
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++++|.+|+|||||++.+.|..
T Consensus 8 I~lvG~~nvGKTsL~n~l~g~~ 29 (258)
T 3a1s_A 8 VALAGCPNVGKTSLFNALTGTK 29 (258)
T ss_dssp EEEECCTTSSHHHHHHHHHTTC
T ss_pred EEEECCCCCCHHHHHHHHHCCC
Confidence 6899999999999999999864
No 340
>1njg_A DNA polymerase III subunit gamma; rossman-like fold, AAA+ ATPase domains, sensor 1, sensor 2, transferase; HET: DNA; 2.20A {Escherichia coli} SCOP: c.37.1.20 PDB: 1njf_A*
Probab=98.30 E-value=5.3e-07 Score=47.13 Aligned_cols=23 Identities=30% Similarity=0.405 Sum_probs=20.1
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
+.|.||+|+||||+++.+.....
T Consensus 48 ~ll~G~~G~GKT~l~~~~~~~~~ 70 (250)
T 1njg_A 48 YLFSGTRGVGKTSIARLLAKGLN 70 (250)
T ss_dssp EEEECSTTSCHHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHhc
Confidence 56899999999999999987664
No 341
>2gf9_A RAS-related protein RAB-3D; G-protein, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 1.53A {Homo sapiens} PDB: 3rab_A*
Probab=98.30 E-value=5.3e-07 Score=46.02 Aligned_cols=22 Identities=32% Similarity=0.218 Sum_probs=19.8
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|+.|+|||||++.+.+..
T Consensus 25 i~vvG~~~~GKSsli~~l~~~~ 46 (189)
T 2gf9_A 25 LLLIGNSSVGKTSFLFRYADDS 46 (189)
T ss_dssp EEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHHcCC
Confidence 6899999999999999998764
No 342
>2cjw_A GTP-binding protein GEM; nucleotide-binding, small GTPase, conformational change, cysteine-modified, G-protein hydrolase; HET: GDP; 2.10A {Homo sapiens} PDB: 2cjw_B* 2ht6_A*
Probab=98.30 E-value=5.3e-07 Score=46.38 Aligned_cols=21 Identities=43% Similarity=0.447 Sum_probs=19.1
Q ss_pred eeEEcCCCCcHHHHHHHHHhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQ 22 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~ 22 (79)
++|+|.+|+|||||++.+.+.
T Consensus 9 v~lvG~~~vGKSsL~~~~~~~ 29 (192)
T 2cjw_A 9 VVLIGEQGVGKSTLANIFAGV 29 (192)
T ss_dssp EEEECSTTSSHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHhcC
Confidence 689999999999999999864
No 343
>2fg5_A RAB-22B, RAS-related protein RAB-31; G-protein, GTP analogue, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GNP; 2.80A {Homo sapiens} SCOP: c.37.1.8
Probab=98.30 E-value=4.7e-07 Score=46.39 Aligned_cols=22 Identities=23% Similarity=0.199 Sum_probs=19.8
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|+.|+|||||++.+.+..
T Consensus 26 i~vvG~~~~GKSsli~~l~~~~ 47 (192)
T 2fg5_A 26 VCLLGDTGVGKSSIVCRFVQDH 47 (192)
T ss_dssp EEEEECTTSSHHHHHHHHHHCC
T ss_pred EEEECcCCCCHHHHHHHHhcCC
Confidence 6899999999999999998754
No 344
>3kkq_A RAS-related protein M-RAS; GTP-binding, GTPase, signaling protein; HET: GDP; 1.20A {Mus musculus} SCOP: c.37.1.8 PDB: 3kkp_A* 3kko_A* 3pit_A* 3pir_A* 1x1r_A* 1x1s_A*
Probab=98.30 E-value=5.5e-07 Score=45.60 Aligned_cols=22 Identities=23% Similarity=0.157 Sum_probs=19.5
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|++|+|||||++.+.+..
T Consensus 21 i~v~G~~~~GKSsl~~~l~~~~ 42 (183)
T 3kkq_A 21 LVVVGDGGVGKSALTIQFFQKI 42 (183)
T ss_dssp EEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHHhCC
Confidence 6899999999999999998653
No 345
>3tkl_A RAS-related protein RAB-1A; vesicle trafficking, protein transport-protein binding compl; HET: GTP; 2.18A {Homo sapiens}
Probab=98.30 E-value=5.5e-07 Score=46.00 Aligned_cols=22 Identities=32% Similarity=0.188 Sum_probs=19.8
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|+.|+|||||++.+.+..
T Consensus 19 i~v~G~~~~GKSsli~~l~~~~ 40 (196)
T 3tkl_A 19 LLLIGDSGVGKSCLLLRFADDT 40 (196)
T ss_dssp EEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEECcCCCCHHHHHHHHHcCC
Confidence 6899999999999999998754
No 346
>3i8s_A Ferrous iron transport protein B; GTPase, GPCR, iron uptake, FEO, cell inner membrane, cell ME GTP-binding, ION transport, membrane; 1.80A {Escherichia coli} PDB: 3i8x_A* 3i92_A* 3hyr_A 3hyt_A* 2wic_A* 2wib_A* 2wia_A*
Probab=98.30 E-value=4.4e-07 Score=49.25 Aligned_cols=22 Identities=41% Similarity=0.386 Sum_probs=20.4
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++++|.+|+|||||++.+.|..
T Consensus 6 I~lvG~~n~GKSTLin~l~g~~ 27 (274)
T 3i8s_A 6 IGLIGNPNSGKTTLFNQLTGSR 27 (274)
T ss_dssp EEEEECTTSSHHHHHHHHHTTC
T ss_pred EEEECCCCCCHHHHHHHHhCCC
Confidence 6899999999999999999875
No 347
>3h4m_A Proteasome-activating nucleotidase; ATPase, PAN, ATP-binding, nucleotide-binding, HY; HET: ADP; 3.11A {Methanocaldococcus jannaschii}
Probab=98.29 E-value=5.5e-07 Score=48.73 Aligned_cols=23 Identities=39% Similarity=0.408 Sum_probs=20.1
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
+-|.||+|+||||+++.+.....
T Consensus 54 ~ll~G~~GtGKT~la~~la~~~~ 76 (285)
T 3h4m_A 54 ILLYGPPGTGKTLLAKAVATETN 76 (285)
T ss_dssp EEEESSSSSSHHHHHHHHHHHTT
T ss_pred EEEECCCCCcHHHHHHHHHHHhC
Confidence 45889999999999999988754
No 348
>3kl4_A SRP54, signal recognition 54 kDa protein; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Sulfolobus solfataricus} PDB: 1qzx_A 1qzw_A
Probab=98.29 E-value=3.1e-07 Score=52.89 Aligned_cols=26 Identities=27% Similarity=0.284 Sum_probs=22.4
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhccc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQE 26 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~ 26 (79)
+++++|++|+||||++..+...+...
T Consensus 99 vI~lvG~~GsGKTTt~~kLA~~l~~~ 124 (433)
T 3kl4_A 99 IIMLVGVQGSGKTTTAGKLAYFYKKR 124 (433)
T ss_dssp EEEECCCTTSCHHHHHHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHc
Confidence 36789999999999999999887654
No 349
>3be4_A Adenylate kinase; malaria, cryptosporidium parvum nonprotein inhibitors, nucleotide-binding, transferase; HET: AP5; 1.60A {Cryptosporidium parvum iowa II}
Probab=98.29 E-value=5.1e-07 Score=47.33 Aligned_cols=22 Identities=27% Similarity=0.330 Sum_probs=19.4
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
+.|+|+.||||||+++.|...+
T Consensus 8 I~l~G~~GsGKsT~a~~La~~l 29 (217)
T 3be4_A 8 LILIGAPGSGKGTQCEFIKKEY 29 (217)
T ss_dssp EEEEECTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHh
Confidence 6789999999999999997654
No 350
>2gf0_A GTP-binding protein DI-RAS1; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC, transport protein; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8
Probab=98.29 E-value=5e-07 Score=46.27 Aligned_cols=21 Identities=24% Similarity=0.265 Sum_probs=19.2
Q ss_pred eeEEcCCCCcHHHHHHHHHhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQ 22 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~ 22 (79)
++|+|++|+|||||++.+.+.
T Consensus 11 i~vvG~~~~GKSsli~~l~~~ 31 (199)
T 2gf0_A 11 VVVFGAGGVGKSSLVLRFVKG 31 (199)
T ss_dssp EEEEECTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCcHHHHHHHHHcC
Confidence 689999999999999999874
No 351
>3n70_A Transport activator; sigma-54, ntpase, PSI, MCSG, structural genomics, center for structural genomics; 2.80A {Escherichia coli}
Probab=98.29 E-value=6.2e-07 Score=44.37 Aligned_cols=22 Identities=27% Similarity=0.286 Sum_probs=19.5
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
+-|+||+|+|||++++.|....
T Consensus 27 vll~G~~GtGKt~lA~~i~~~~ 48 (145)
T 3n70_A 27 VWLYGAPGTGRMTGARYLHQFG 48 (145)
T ss_dssp EEEESSTTSSHHHHHHHHHHSS
T ss_pred EEEECCCCCCHHHHHHHHHHhC
Confidence 4589999999999999998764
No 352
>1j8m_F SRP54, signal recognition 54 kDa protein; signaling protein; 2.00A {Acidianus ambivalens} SCOP: a.24.13.1 c.37.1.10 PDB: 1j8y_F
Probab=98.29 E-value=2.2e-07 Score=51.08 Aligned_cols=26 Identities=27% Similarity=0.295 Sum_probs=22.7
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhccc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQE 26 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~ 26 (79)
+++++|++|+||||++..+.+.+.+.
T Consensus 100 vi~i~G~~G~GKTT~~~~la~~~~~~ 125 (297)
T 1j8m_F 100 VIMLVGVQGTGKTTTAGKLAYFYKKK 125 (297)
T ss_dssp EEEEECSSCSSTTHHHHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHC
Confidence 36789999999999999999888654
No 353
>1mh1_A RAC1; GTP-binding, GTPase, small G-protein, RHO family, RAS super family; HET: GNP; 1.38A {Homo sapiens} SCOP: c.37.1.8 PDB: 1hh4_A* 2p2l_A* 2h7v_A* 1g4u_R* 1i4d_D* 1i4l_D* 2vrw_A 1e96_A* 1i4t_D* 2rmk_A* 2yin_C 1ryf_A* 1ryh_A* 3su8_A* 3sua_A* 2fju_A* 1he1_C* 2nz8_A 1foe_B 3bji_C ...
Probab=98.29 E-value=6e-07 Score=45.41 Aligned_cols=21 Identities=29% Similarity=0.153 Sum_probs=18.9
Q ss_pred eeEEcCCCCcHHHHHHHHHhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQ 22 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~ 22 (79)
++++|++|+|||||++.+.+.
T Consensus 8 i~~~G~~~~GKssl~~~l~~~ 28 (186)
T 1mh1_A 8 CVVVGDGAVGKTCLLISYTTN 28 (186)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHcC
Confidence 689999999999999998764
No 354
>1moz_A ARL1, ADP-ribosylation factor-like protein 1; GTP-binding, protein binding; HET: GDP; 3.17A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=98.29 E-value=2e-07 Score=47.20 Aligned_cols=20 Identities=25% Similarity=0.227 Sum_probs=18.3
Q ss_pred eeEEcCCCCcHHHHHHHHHh
Q 044571 2 EGLYGISCVGKTTLANFVGN 21 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g 21 (79)
++|+|++|+|||||++.+.+
T Consensus 21 i~v~G~~~~GKssli~~l~~ 40 (183)
T 1moz_A 21 ILILGLDGAGKTTILYRLQI 40 (183)
T ss_dssp EEEEEETTSSHHHHHHHTCC
T ss_pred EEEECCCCCCHHHHHHHHhc
Confidence 68999999999999999874
No 355
>3oes_A GTPase rhebl1; small GTPase, structural genomics, structural genomics conso SGC, hydrolase; HET: GNP; 2.30A {Homo sapiens}
Probab=98.29 E-value=5.4e-07 Score=46.46 Aligned_cols=22 Identities=36% Similarity=0.469 Sum_probs=19.9
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|..|+|||||++.+.+..
T Consensus 27 i~vvG~~~~GKSsli~~l~~~~ 48 (201)
T 3oes_A 27 VVILGYRCVGKTSLAHQFVEGE 48 (201)
T ss_dssp EEEEESTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCcCHHHHHHHHHhCC
Confidence 6899999999999999998764
No 356
>3cbq_A GTP-binding protein REM 2; FLJ38964A, structural genomics consortium, SGC, GDP, membrane, nucleotide-binding, nucleotide binding protein; HET: GDP; 1.82A {Homo sapiens}
Probab=98.29 E-value=2.8e-07 Score=47.51 Aligned_cols=21 Identities=48% Similarity=0.460 Sum_probs=18.8
Q ss_pred eeEEcCCCCcHHHHHHHHHhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQ 22 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~ 22 (79)
++|+|.+|+|||||++.+.+.
T Consensus 26 i~vvG~~~vGKSsLi~~l~~~ 46 (195)
T 3cbq_A 26 VMLVGESGVGKSTLAGTFGGL 46 (195)
T ss_dssp EEEECSTTSSHHHHHHHTCCE
T ss_pred EEEECCCCCCHHHHHHHHHhc
Confidence 689999999999999999654
No 357
>2ew1_A RAS-related protein RAB-30; G-protein, GTP analogue, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GNP; 2.00A {Homo sapiens} SCOP: c.37.1.8
Probab=98.28 E-value=5.5e-07 Score=46.73 Aligned_cols=22 Identities=36% Similarity=0.294 Sum_probs=19.3
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|++|+|||||++.+.+..
T Consensus 29 i~lvG~~~vGKSsLi~~l~~~~ 50 (201)
T 2ew1_A 29 IVLIGNAGVGKTCLVRRFTQGL 50 (201)
T ss_dssp EEEEESTTSSHHHHHHHHHHSS
T ss_pred EEEECcCCCCHHHHHHHHHhCC
Confidence 6899999999999999887643
No 358
>1z06_A RAS-related protein RAB-33B; RAB GTPase, RAB33B GTPase, vesicular trafficking, protein transport; HET: GNP; 1.81A {Mus musculus} SCOP: c.37.1.8 PDB: 2g77_B*
Probab=98.28 E-value=6.3e-07 Score=45.72 Aligned_cols=22 Identities=32% Similarity=0.107 Sum_probs=19.4
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|.+|+|||||++.+.+..
T Consensus 23 i~v~G~~~~GKSsli~~l~~~~ 44 (189)
T 1z06_A 23 IIVIGDSNVGKTCLTYRFCAGR 44 (189)
T ss_dssp EEEECCTTSSHHHHHHHHHHSS
T ss_pred EEEECCCCCCHHHHHHHHHcCC
Confidence 6899999999999999997653
No 359
>2wsm_A Hydrogenase expression/formation protein (HYPB); metal binding protein; 2.30A {Archaeoglobus fulgidus}
Probab=98.28 E-value=5.6e-07 Score=46.99 Aligned_cols=22 Identities=23% Similarity=0.225 Sum_probs=19.5
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|.+|+|||||++.+.+..
T Consensus 33 i~i~G~~g~GKTTl~~~l~~~~ 54 (221)
T 2wsm_A 33 VNIMGAIGSGKTLLIERTIERI 54 (221)
T ss_dssp EEEEECTTSCHHHHHHHHHHHH
T ss_pred EEEEcCCCCCHHHHHHHHHHHh
Confidence 6899999999999999988753
No 360
>1zbd_A Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: c.37.1.8
Probab=98.28 E-value=6.2e-07 Score=46.17 Aligned_cols=22 Identities=27% Similarity=0.202 Sum_probs=19.7
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|+.|+|||||++.+.+..
T Consensus 11 i~v~G~~~~GKSsli~~l~~~~ 32 (203)
T 1zbd_A 11 ILIIGNSSVGKTSFLFRYADDS 32 (203)
T ss_dssp EEEECSTTSSHHHHHHHHHTCC
T ss_pred EEEECCCCCCHHHHHHHHhcCC
Confidence 6899999999999999998754
No 361
>1jal_A YCHF protein; nucleotide-binding fold, structural genomics, structure 2 function project, S2F, unknown function; 2.40A {Haemophilus influenzae} SCOP: c.37.1.8 d.15.10.2
Probab=98.28 E-value=5.9e-07 Score=50.72 Aligned_cols=22 Identities=36% Similarity=0.465 Sum_probs=20.0
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|.+|+|||||++.+.+..
T Consensus 5 I~IVG~pnvGKSTL~n~Lt~~~ 26 (363)
T 1jal_A 5 CGIVGLPNVGKSTLFNALTKAG 26 (363)
T ss_dssp EEEECCTTSSHHHHHHHHHHTC
T ss_pred EEEECCCCCCHHHHHHHHHCCC
Confidence 7899999999999999999843
No 362
>2a5j_A RAS-related protein RAB-2B; GTPase, signal transduction, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 1.50A {Homo sapiens} SCOP: c.37.1.8 PDB: 1z0a_A*
Probab=98.27 E-value=6.8e-07 Score=45.71 Aligned_cols=22 Identities=23% Similarity=0.140 Sum_probs=19.6
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|+.|+|||||++.+.+..
T Consensus 24 i~v~G~~~~GKSsli~~l~~~~ 45 (191)
T 2a5j_A 24 YIIIGDTGVGKSCLLLQFTDKR 45 (191)
T ss_dssp EEEESSTTSSHHHHHHHHHHSC
T ss_pred EEEECcCCCCHHHHHHHHhcCC
Confidence 6799999999999999998754
No 363
>3dz8_A RAS-related protein RAB-3B; GDP, GTPase, structural genomics consortium, SGC, cell GTP-binding, lipoprotein, membrane, methylation; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8
Probab=98.27 E-value=6.1e-07 Score=45.89 Aligned_cols=22 Identities=27% Similarity=0.212 Sum_probs=19.9
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|+.|+|||||++.+.+..
T Consensus 26 i~v~G~~~~GKSsli~~l~~~~ 47 (191)
T 3dz8_A 26 LLIIGNSSVGKTSFLFRYADDT 47 (191)
T ss_dssp EEEEESTTSSHHHHHHHHHHHT
T ss_pred EEEECCCCcCHHHHHHHHhcCC
Confidence 6899999999999999998764
No 364
>2qz4_A Paraplegin; AAA+, SPG7, protease, ADP, structural genomics, structural G consortium, SGC, ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.22A {Homo sapiens}
Probab=98.27 E-value=6.7e-07 Score=47.75 Aligned_cols=23 Identities=35% Similarity=0.354 Sum_probs=19.9
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
+-|+||+|+||||+++.+.....
T Consensus 42 vll~G~~GtGKT~la~~la~~~~ 64 (262)
T 2qz4_A 42 ALLLGPPGCGKTLLAKAVATEAQ 64 (262)
T ss_dssp EEEESCTTSSHHHHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHHHhC
Confidence 35889999999999999988654
No 365
>3exa_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacillus halodurans} PDB: 2qgn_A
Probab=98.27 E-value=5.5e-07 Score=50.03 Aligned_cols=23 Identities=26% Similarity=0.439 Sum_probs=20.0
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
+.|+||+|||||||+..+.....
T Consensus 6 i~i~GptgsGKt~la~~La~~~~ 28 (322)
T 3exa_A 6 VAIVGPTAVGKTKTSVMLAKRLN 28 (322)
T ss_dssp EEEECCTTSCHHHHHHHHHHTTT
T ss_pred EEEECCCcCCHHHHHHHHHHhCc
Confidence 67899999999999999986553
No 366
>1ksh_A ARF-like protein 2; small GTPase, small GTP-binding protein, ARF family; HET: CME GDP; 1.80A {Mus musculus} SCOP: c.37.1.8 PDB: 1ksg_A* 1ksj_A* 3doe_A* 3dof_A*
Probab=98.27 E-value=5.6e-07 Score=45.73 Aligned_cols=22 Identities=23% Similarity=0.249 Sum_probs=19.7
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++++|++|+|||||++.+.+..
T Consensus 21 i~v~G~~~~GKssl~~~l~~~~ 42 (186)
T 1ksh_A 21 LLMLGLDNAGKTTILKKFNGED 42 (186)
T ss_dssp EEEECSTTSSHHHHHHHHTTCC
T ss_pred EEEECCCCCCHHHHHHHHhcCC
Confidence 6899999999999999998754
No 367
>2p65_A Hypothetical protein PF08_0063; CLPB, malaria, structural genomics, structural genomics consortium, SGC, unknown function; 1.70A {Plasmodium falciparum}
Probab=98.27 E-value=4.3e-07 Score=45.94 Aligned_cols=24 Identities=29% Similarity=0.274 Sum_probs=20.4
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhcc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLRQ 25 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~~ 25 (79)
+.|+||+|+||||+++.+......
T Consensus 46 vll~G~~G~GKT~la~~~~~~~~~ 69 (187)
T 2p65_A 46 PILLGDPGVGKTAIVEGLAIKIVQ 69 (187)
T ss_dssp EEEESCGGGCHHHHHHHHHHHHHT
T ss_pred eEEECCCCCCHHHHHHHHHHHHHh
Confidence 458899999999999999887643
No 368
>2atv_A RERG, RAS-like estrogen-regulated growth inhibitor; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8
Probab=98.27 E-value=7.1e-07 Score=45.81 Aligned_cols=22 Identities=23% Similarity=0.280 Sum_probs=19.6
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|.+|+|||||++.+.+..
T Consensus 31 i~v~G~~~vGKSsli~~l~~~~ 52 (196)
T 2atv_A 31 LAIFGRAGVGKSALVVRFLTKR 52 (196)
T ss_dssp EEEECCTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHHhCC
Confidence 6899999999999999998753
No 369
>3bwd_D RAC-like GTP-binding protein ARAC6; G domain, cytoplasm, lipoprotein, membrane, methylation, nucleotide-binding, prenylation, ----; HET: GDP; 1.53A {Arabidopsis thaliana} PDB: 2nty_C* 2wbl_C
Probab=98.26 E-value=7.4e-07 Score=44.99 Aligned_cols=21 Identities=29% Similarity=0.110 Sum_probs=19.0
Q ss_pred eeEEcCCCCcHHHHHHHHHhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQ 22 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~ 22 (79)
++++|++|+|||||++.+.+.
T Consensus 11 i~v~G~~~~GKssl~~~~~~~ 31 (182)
T 3bwd_D 11 CVTVGDGAVGKTCLLISYTSN 31 (182)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHhcC
Confidence 689999999999999998764
No 370
>3t5g_A GTP-binding protein RHEB; immunoglobulin-like beta sandwitch, PDE delta, RHEB; HET: GDP FAR; 1.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 1xtq_A* 1xtr_A* 1xts_A* 2l0x_A* 3sea_A*
Probab=98.26 E-value=6.6e-07 Score=45.22 Aligned_cols=21 Identities=24% Similarity=0.295 Sum_probs=18.8
Q ss_pred eeEEcCCCCcHHHHHHHHHhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQ 22 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~ 22 (79)
++|+|++|+|||||++.+.+.
T Consensus 9 i~~~G~~~~GKSsli~~l~~~ 29 (181)
T 3t5g_A 9 IAILGYRSVGKSSLTIQFVEG 29 (181)
T ss_dssp EEEEESTTSSHHHHHHHHHHS
T ss_pred EEEECcCCCCHHHHHHHHHcC
Confidence 689999999999999999854
No 371
>1ak2_A Adenylate kinase isoenzyme-2; nucleoside monophosphate kinase, phosphotransferase; 1.92A {Bos taurus} SCOP: c.37.1.1 g.41.2.1 PDB: 2ak2_A 2c9y_A*
Probab=98.26 E-value=7.3e-07 Score=47.21 Aligned_cols=22 Identities=27% Similarity=0.256 Sum_probs=19.4
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
+.|+|+.||||||+++.|...+
T Consensus 19 I~l~G~~GsGKsT~a~~La~~l 40 (233)
T 1ak2_A 19 AVLLGPPGAGKGTQAPKLAKNF 40 (233)
T ss_dssp EEEECCTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHh
Confidence 6789999999999999997654
No 372
>1zd9_A ADP-ribosylation factor-like 10B; transport protein, GDP-binding, membrane trafficking, structural genomics, structural genomics consortium, SGC; HET: GDP; 1.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 2al7_A* 2h18_A*
Probab=98.26 E-value=7.4e-07 Score=45.51 Aligned_cols=22 Identities=32% Similarity=0.453 Sum_probs=19.6
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|+.|+|||||++.+.+..
T Consensus 25 i~v~G~~~~GKSsli~~l~~~~ 46 (188)
T 1zd9_A 25 LTLVGLQYSGKTTFVNVIASGQ 46 (188)
T ss_dssp EEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHHcCC
Confidence 6899999999999999998653
No 373
>3reg_A RHO-like small GTPase; cytoskeleton, nucleotide-binding, GTP-binding, signaling Pro lipoprotein, prenylation; HET: GSP; 1.80A {Entamoeba histolytica} PDB: 3ref_B* 4dvg_A*
Probab=98.26 E-value=7.4e-07 Score=45.62 Aligned_cols=22 Identities=27% Similarity=0.132 Sum_probs=19.8
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++++|.+|+|||||++.+.+..
T Consensus 26 i~~vG~~~~GKSsl~~~l~~~~ 47 (194)
T 3reg_A 26 IVVVGDGAVGKTCLLLAFSKGE 47 (194)
T ss_dssp EEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEECcCCCCHHHHHHHHhcCC
Confidence 6899999999999999998764
No 374
>2qu8_A Putative nucleolar GTP-binding protein 1; GTPase, malaria, structural genomics, structural genomics consortium, SGC, unknown function; HET: GDP; 2.01A {Plasmodium falciparum}
Probab=98.26 E-value=5.8e-07 Score=47.30 Aligned_cols=22 Identities=32% Similarity=0.342 Sum_probs=19.8
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|++|+|||||++.+.+..
T Consensus 32 I~vvG~~~vGKSsLin~l~~~~ 53 (228)
T 2qu8_A 32 IILSGAPNVGKSSFMNIVSRAN 53 (228)
T ss_dssp EEEECSTTSSHHHHHHHHTTTC
T ss_pred EEEECCCCCCHHHHHHHHhCCC
Confidence 6899999999999999998763
No 375
>2bcg_Y Protein YP2, GTP-binding protein YPT1; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 1ukv_Y* 3cue_F* 1yzn_A* 3sfv_A* 2wwx_A 2fol_A* 3nkv_A* 3jza_A* 2rhd_A*
Probab=98.26 E-value=6.7e-07 Score=46.19 Aligned_cols=22 Identities=32% Similarity=0.202 Sum_probs=19.6
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|+.|+|||||++.+.+..
T Consensus 11 i~v~G~~~~GKSsli~~l~~~~ 32 (206)
T 2bcg_Y 11 LLLIGNSGVGKSCLLLRFSDDT 32 (206)
T ss_dssp EEEEESTTSSHHHHHHHHHHCC
T ss_pred EEEECCCCCCHHHHHHHHhcCC
Confidence 6899999999999999998753
No 376
>2p5s_A RAS and EF-hand domain containing; G-protein, RAB, GDP, structural genomics, SGC, structural genomics consortium, signaling protein; HET: GDP; 2.15A {Homo sapiens}
Probab=98.26 E-value=7.6e-07 Score=45.84 Aligned_cols=22 Identities=23% Similarity=0.158 Sum_probs=19.6
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|+.|+|||||++.+.+..
T Consensus 31 i~v~G~~~~GKSsli~~l~~~~ 52 (199)
T 2p5s_A 31 IVLAGDAAVGKSSFLMRLCKNE 52 (199)
T ss_dssp EEEESSTTSSHHHHHHHHHHCC
T ss_pred EEEECcCCCCHHHHHHHHHhCC
Confidence 6899999999999999998754
No 377
>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*
Probab=98.26 E-value=5.3e-07 Score=51.56 Aligned_cols=22 Identities=18% Similarity=0.015 Sum_probs=19.1
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
+.|+|++||||||+++.+....
T Consensus 261 Iil~G~pGSGKSTla~~L~~~~ 282 (416)
T 3zvl_A 261 VVAVGFPGAGKSTFIQEHLVSA 282 (416)
T ss_dssp EEEESCTTSSHHHHHHHHTGGG
T ss_pred EEEECCCCCCHHHHHHHHHHhc
Confidence 6789999999999999987643
No 378
>3llu_A RAS-related GTP-binding protein C; structural genomics consortium, SGC, cytoplasm, nucleotide-binding, nucleus, phosphoprotein; HET: GNP; 1.40A {Homo sapiens} PDB: 2q3f_A*
Probab=98.26 E-value=6.3e-07 Score=46.09 Aligned_cols=23 Identities=22% Similarity=0.327 Sum_probs=20.0
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
++++|.+|+|||||++.+.+...
T Consensus 23 i~~vG~~~vGKTsLi~~l~~~~~ 45 (196)
T 3llu_A 23 ILLMGLRRSGKSSIQKVVFHKMS 45 (196)
T ss_dssp EEEEESTTSSHHHHHHHHHSCCC
T ss_pred EEEECCCCCCHHHHHHHHHhcCC
Confidence 67999999999999999888543
No 379
>2r62_A Cell division protease FTSH homolog; ATPase domain, ATP-binding, cell CELL division, hydrolase, membrane, metal-binding; 3.30A {Helicobacter pylori} PDB: 2r65_A*
Probab=98.25 E-value=4.1e-07 Score=48.89 Aligned_cols=23 Identities=35% Similarity=0.296 Sum_probs=19.8
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
+.|.||+|+||||+++++.....
T Consensus 47 vll~G~~GtGKT~la~~la~~~~ 69 (268)
T 2r62_A 47 VLLVGPPGTGKTLLAKAVAGEAH 69 (268)
T ss_dssp CCCBCSSCSSHHHHHHHHHHHHT
T ss_pred EEEECCCCCcHHHHHHHHHHHhC
Confidence 35789999999999999988653
No 380
>3cph_A RAS-related protein SEC4; RAB GTPase, prenylation, vesicular transport, cytoplasm, cytoplasmic vesicle, exocytosis, GTP-binding; HET: GDP; 2.90A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=98.25 E-value=8e-07 Score=45.99 Aligned_cols=22 Identities=32% Similarity=0.113 Sum_probs=19.6
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|+.|+|||||++.+.+..
T Consensus 23 i~v~G~~~~GKSsli~~l~~~~ 44 (213)
T 3cph_A 23 ILLIGDSGVGKSCLLVRFVEDK 44 (213)
T ss_dssp EEEECSTTSSHHHHHHHHHHCC
T ss_pred EEEECCCCCCHHHHHHHHHhCC
Confidence 6899999999999999998653
No 381
>1x3s_A RAS-related protein RAB-18; GTPase, GNP, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: GNP; 1.32A {Homo sapiens} SCOP: c.37.1.8
Probab=98.25 E-value=8.3e-07 Score=45.27 Aligned_cols=22 Identities=27% Similarity=0.194 Sum_probs=19.7
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|+.|+|||||++.+.+..
T Consensus 18 i~v~G~~~~GKssli~~l~~~~ 39 (195)
T 1x3s_A 18 ILIIGESGVGKSSLLLRFTDDT 39 (195)
T ss_dssp EEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHHcCC
Confidence 6899999999999999998754
No 382
>1gwn_A RHO-related GTP-binding protein RHOE; GTPase, inactive GTPase, signal transduction; HET: GTP; 2.1A {Mus musculus} SCOP: c.37.1.8
Probab=98.25 E-value=7.3e-07 Score=46.34 Aligned_cols=22 Identities=27% Similarity=0.231 Sum_probs=19.8
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|++|+|||||++.+.+..
T Consensus 31 i~vvG~~~vGKSsLi~~l~~~~ 52 (205)
T 1gwn_A 31 IVVVGDSQCGKTALLHVFAKDC 52 (205)
T ss_dssp EEEEESTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHhcCC
Confidence 6899999999999999998763
No 383
>2o52_A RAS-related protein RAB-4B; G-protein, GDP, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 2.20A {Homo sapiens}
Probab=98.25 E-value=6.5e-07 Score=46.20 Aligned_cols=22 Identities=18% Similarity=0.063 Sum_probs=18.5
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|++|+|||||++.+.+..
T Consensus 28 i~v~G~~~~GKSsLi~~l~~~~ 49 (200)
T 2o52_A 28 FLVIGSAGTGKSCLLHQFIENK 49 (200)
T ss_dssp EEEEESTTSSHHHHHHHHHC--
T ss_pred EEEECcCCCCHHHHHHHHHhCC
Confidence 6899999999999999997643
No 384
>1zj6_A ADP-ribosylation factor-like protein 5; ARL, GTP-binding, transport protein; HET: G3D; 2.00A {Homo sapiens} SCOP: c.37.1.8
Probab=98.24 E-value=7.4e-07 Score=45.38 Aligned_cols=21 Identities=24% Similarity=0.238 Sum_probs=19.0
Q ss_pred eeEEcCCCCcHHHHHHHHHhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQ 22 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~ 22 (79)
++++|..|+|||||++.+.+.
T Consensus 19 i~v~G~~~~GKssl~~~l~~~ 39 (187)
T 1zj6_A 19 VIIVGLDNAGKTTILYQFSMN 39 (187)
T ss_dssp EEEEESTTSSHHHHHHHHHTT
T ss_pred EEEECCCCCCHHHHHHHHhcC
Confidence 689999999999999999854
No 385
>3c5c_A RAS-like protein 12; GDP, GTPase, structural genomics consortium, SGC, limited proteolysis, GTP-binding, nucleotide-binding, signaling protein; HET: GDP; 1.85A {Homo sapiens}
Probab=98.24 E-value=8.6e-07 Score=45.30 Aligned_cols=22 Identities=18% Similarity=0.140 Sum_probs=19.2
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|.+|+|||||++.+.+..
T Consensus 24 i~vvG~~~vGKTsLi~~l~~~~ 45 (187)
T 3c5c_A 24 LAILGRRGAGKSALTVKFLTKR 45 (187)
T ss_dssp EEEECCTTSSHHHHHHHHHHSS
T ss_pred EEEECCCCCcHHHHHHHHHhCC
Confidence 6899999999999999887653
No 386
>2fh5_B SR-beta, signal recognition particle receptor beta subunit; endomembrane targeting, GTPase, GAP, longin domain, SEDL, transport protein; HET: GTP; 2.45A {Mus musculus} SCOP: c.37.1.8 PDB: 2go5_2
Probab=98.24 E-value=8.6e-07 Score=46.04 Aligned_cols=22 Identities=23% Similarity=0.040 Sum_probs=19.6
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|++|+|||||++.+.+..
T Consensus 10 i~vvG~~~~GKTsli~~l~~~~ 31 (214)
T 2fh5_B 10 VLFVGLCDSGKTLLFVRLLTGQ 31 (214)
T ss_dssp EEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHhCCC
Confidence 6899999999999999998654
No 387
>1w5s_A Origin recognition complex subunit 2 ORC2; replication, CDC6, DNA replication initiation, DNA BIND protein, AAA+ ATPase; HET: ADP; 2.4A {Aeropyrum pernix} SCOP: a.4.5.11 c.37.1.20 PDB: 1w5t_A*
Probab=98.24 E-value=8.3e-06 Score=45.98 Aligned_cols=51 Identities=25% Similarity=0.378 Sum_probs=31.7
Q ss_pred EEcCCCCcHHHHHHHHHhhhcccC---CCCcEEEEEec--CCccHHHHHHHHHHHhc
Q 044571 4 LYGISCVGKTTLANFVGNQLRQEK---IFDEVGIATVS--QDPDIIKVQGELAKSLG 55 (79)
Q Consensus 4 i~G~~G~GKstl~~~i~g~~~~~~---~~~~~~~~~v~--q~~~~~~v~~~i~~~~~ 55 (79)
|+|+.|+|||||++.+........ .+ ...+.++. +......+...+...+.
T Consensus 57 i~G~~G~GKT~L~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~l~ 112 (412)
T 1w5s_A 57 SIGRVGIGKTTLAKFTVKRVSEAAAKEGL-TVKQAYVNAFNAPNLYTILSLIVRQTG 112 (412)
T ss_dssp CTTCCSSSHHHHHHHHHHHHHHHHHHTTC-CEEEEEEEGGGCCSHHHHHHHHHHHHT
T ss_pred CcCcCCCCHHHHHHHHHHHHHHHHhccCC-ceeEEEEECCCCCCHHHHHHHHHHHhC
Confidence 489999999999999987654320 11 12333433 44455566666666554
No 388
>2fv8_A H6, RHO-related GTP-binding protein RHOB; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8
Probab=98.24 E-value=7.9e-07 Score=46.07 Aligned_cols=22 Identities=23% Similarity=0.148 Sum_probs=19.6
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++++|.+|+|||||++.+.+..
T Consensus 28 i~vvG~~~~GKSsli~~l~~~~ 49 (207)
T 2fv8_A 28 LVVVGDGACGKTCLLIVFSKDE 49 (207)
T ss_dssp EEEEECTTSSHHHHHHHHHHSS
T ss_pred EEEECcCCCCHHHHHHHHhcCC
Confidence 6899999999999999998753
No 389
>2il1_A RAB12; G-protein, GDP, GTPase, predicted, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 2.10A {Homo sapiens}
Probab=98.24 E-value=5.8e-07 Score=46.09 Aligned_cols=22 Identities=27% Similarity=0.264 Sum_probs=18.6
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|.+|+|||||++.+.+..
T Consensus 29 i~vvG~~~~GKSsLi~~l~~~~ 50 (192)
T 2il1_A 29 VIIIGSRGVGKTSLMERFTDDT 50 (192)
T ss_dssp EEEECSTTSSHHHHHHHHCC--
T ss_pred EEEECCCCCCHHHHHHHHhcCC
Confidence 6899999999999999998654
No 390
>1jwy_B Dynamin A GTPase domain; dynamin, GTPase, GDP, myosin, fusion-protein, hydrolase; HET: BGC ADP GDP; 2.30A {Dictyostelium discoideum} SCOP: c.37.1.8 PDB: 1jx2_B*
Probab=98.24 E-value=6.9e-07 Score=49.00 Aligned_cols=22 Identities=14% Similarity=0.119 Sum_probs=20.4
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|..|+|||||++.+.|..
T Consensus 27 I~vvG~~~~GKSTlln~l~g~~ 48 (315)
T 1jwy_B 27 IVVVGSQSSGKSSVLENIVGRD 48 (315)
T ss_dssp EEEEECSSSSHHHHHHHHHTSC
T ss_pred EEEEcCCCCCHHHHHHHHHCCC
Confidence 7899999999999999999874
No 391
>4dhe_A Probable GTP-binding protein ENGB; melioidosis, RAS-like GTPase, cell division, cell cycle, SEP GTP-binding; 2.20A {Burkholderia thailandensis}
Probab=98.23 E-value=2.5e-07 Score=48.30 Aligned_cols=22 Identities=36% Similarity=0.338 Sum_probs=20.2
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|.+|+|||||++.+.+..
T Consensus 32 i~v~G~~~~GKSslin~l~~~~ 53 (223)
T 4dhe_A 32 IAFAGRSNAGKSTAINVLCNQK 53 (223)
T ss_dssp EEEEESCHHHHHHHHHHHTTCS
T ss_pred EEEEcCCCCCHHHHHHHHhCCC
Confidence 6899999999999999998874
No 392
>2h17_A ADP-ribosylation factor-like protein 5A; GDP, GTPase, membrane trafficking, structural genomics consortium, SGC, transport protein; HET: GDP; 1.70A {Homo sapiens} PDB: 2h16_A* 1z6y_A* 1yzg_A*
Probab=98.23 E-value=6.8e-07 Score=45.36 Aligned_cols=21 Identities=24% Similarity=0.238 Sum_probs=19.2
Q ss_pred eeEEcCCCCcHHHHHHHHHhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQ 22 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~ 22 (79)
++++|..|+|||||++.+.+.
T Consensus 24 i~v~G~~~~GKSsli~~l~~~ 44 (181)
T 2h17_A 24 VIIVGLDNAGKTTILYQFSMN 44 (181)
T ss_dssp EEEEEETTSSHHHHHHHHHTT
T ss_pred EEEECCCCCCHHHHHHHHhcC
Confidence 689999999999999999865
No 393
>3a8t_A Adenylate isopentenyltransferase; rossmann fold protein; HET: ATP; 2.37A {Humulus lupulus}
Probab=98.22 E-value=7.5e-07 Score=49.88 Aligned_cols=23 Identities=22% Similarity=0.237 Sum_probs=20.7
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
+.|+||+|+|||||...|...+.
T Consensus 43 IvI~GPTgsGKTtLa~~LA~~l~ 65 (339)
T 3a8t_A 43 LVLMGATGTGKSRLSIDLAAHFP 65 (339)
T ss_dssp EEEECSTTSSHHHHHHHHHTTSC
T ss_pred EEEECCCCCCHHHHHHHHHHHCC
Confidence 67999999999999999988764
No 394
>3def_A T7I23.11 protein; chloroplast, TOC33, GTPase, hydrolase; HET: GDP; 1.96A {Arabidopsis thaliana} PDB: 3bb3_A* 3bb4_A* 2j3e_A*
Probab=98.22 E-value=8.1e-07 Score=47.84 Aligned_cols=22 Identities=23% Similarity=0.187 Sum_probs=20.2
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++++|.+|+|||||++.+.+..
T Consensus 39 I~lvG~~g~GKSSLin~l~~~~ 60 (262)
T 3def_A 39 VLVLGKGGVGKSSTVNSLIGEQ 60 (262)
T ss_dssp EEEEECTTSSHHHHHHHHHTSC
T ss_pred EEEECCCCCCHHHHHHHHhCCC
Confidence 6899999999999999999865
No 395
>2hf9_A Probable hydrogenase nickel incorporation protein HYPB; alpha and beta protein; HET: GSP; 1.90A {Methanocaldococcus jannaschii} PDB: 2hf8_A*
Probab=98.22 E-value=9e-07 Score=46.36 Aligned_cols=22 Identities=27% Similarity=0.229 Sum_probs=19.4
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|.+|+|||||++.+....
T Consensus 41 i~ivG~~gvGKTtl~~~l~~~~ 62 (226)
T 2hf9_A 41 FDFMGAIGSGKTLLIEKLIDNL 62 (226)
T ss_dssp EEEEESTTSSHHHHHHHHHHHH
T ss_pred EEEEcCCCCCHHHHHHHHHHHh
Confidence 6899999999999999887664
No 396
>3hr8_A Protein RECA; alpha and beta proteins (A/B, A+B), ATP-binding, cytoplasm, damage, DNA recombination, DNA repair, DNA-binding; 1.95A {Thermotoga maritima}
Probab=98.22 E-value=6.4e-07 Score=50.44 Aligned_cols=24 Identities=29% Similarity=0.364 Sum_probs=20.9
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhcc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLRQ 25 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~~ 25 (79)
+.|.||+|+|||||+..+.....+
T Consensus 64 ~~I~GppGsGKSTLal~la~~~~~ 87 (356)
T 3hr8_A 64 VEIFGQESSGKTTLALHAIAEAQK 87 (356)
T ss_dssp EEEEESTTSSHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHHh
Confidence 678999999999999999887654
No 397
>1h65_A Chloroplast outer envelope protein OEP34; GTPase, translocon; HET: GDP; 2.0A {Pisum sativum} SCOP: c.37.1.8 PDB: 3bb1_A*
Probab=98.22 E-value=8.4e-07 Score=47.95 Aligned_cols=22 Identities=23% Similarity=0.182 Sum_probs=20.0
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++++|.+|+|||||++.+.+..
T Consensus 42 I~vvG~~g~GKSSLin~l~~~~ 63 (270)
T 1h65_A 42 ILVMGKGGVGKSSTVNSIIGER 63 (270)
T ss_dssp EEEEESTTSSHHHHHHHHHTSC
T ss_pred EEEECCCCCCHHHHHHHHhCCC
Confidence 6799999999999999998864
No 398
>1sxj_D Activator 1 41 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=98.22 E-value=9.9e-07 Score=48.87 Aligned_cols=23 Identities=26% Similarity=0.257 Sum_probs=20.2
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
+.|.||+|+||||+++.+.+.+.
T Consensus 61 ~ll~G~~G~GKT~la~~la~~l~ 83 (353)
T 1sxj_D 61 MLFYGPPGTGKTSTILALTKELY 83 (353)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHhC
Confidence 46889999999999999988753
No 399
>4bas_A ADP-ribosylation factor, putative (small GTPase, putative); hydrolase; HET: GNP; 2.00A {Trypanosoma brucei TREU927}
Probab=98.22 E-value=6.8e-07 Score=45.76 Aligned_cols=22 Identities=32% Similarity=0.332 Sum_probs=19.5
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|.+|+|||||++.+.+..
T Consensus 20 i~v~G~~~~GKSsl~~~l~~~~ 41 (199)
T 4bas_A 20 VVMCGLDNSGKTTIINQVKPAQ 41 (199)
T ss_dssp EEEECCTTSCHHHHHHHHSCCC
T ss_pred EEEECCCCCCHHHHHHHHhcCC
Confidence 6899999999999999997753
No 400
>2iwr_A Centaurin gamma 1; ANK repeat, zinc-finger, GTP-binding, polymorphism, nucleotide-binding, alternative splicing, protein transport; HET: CAF; 1.5A {Homo sapiens} PDB: 2bmj_A
Probab=98.22 E-value=6e-07 Score=45.26 Aligned_cols=21 Identities=24% Similarity=0.248 Sum_probs=19.1
Q ss_pred eeEEcCCCCcHHHHHHHHHhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQ 22 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~ 22 (79)
++++|.+|+|||||++.+.+.
T Consensus 10 i~~vG~~~vGKTsli~~l~~~ 30 (178)
T 2iwr_A 10 LGVLGDARSGKSSLIHRFLTG 30 (178)
T ss_dssp EEEECCGGGCHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHhC
Confidence 689999999999999998875
No 401
>3pih_A Uvrabc system protein A; hydrolase, ABC ATPase, DNA repair, nucleotide excision repai hydrolase-DNA complex; HET: DNA; 2.90A {Thermotoga maritima}
Probab=98.22 E-value=4.6e-07 Score=56.21 Aligned_cols=16 Identities=31% Similarity=0.489 Sum_probs=14.7
Q ss_pred CeeEEcCCCCcHHHHH
Q 044571 1 MEGLYGISCVGKTTLA 16 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~ 16 (79)
+++|+|+||||||||+
T Consensus 612 iv~I~G~SGSGKSTLl 627 (916)
T 3pih_A 612 FVCVTGVSGSGKSSLV 627 (916)
T ss_dssp EEEEECSTTSSHHHHH
T ss_pred EEEEEccCCCChhhhH
Confidence 4789999999999997
No 402
>2j1l_A RHO-related GTP-binding protein RHOD; GTPase, membrane, prenylation, hydrolase, nucleotide-binding, methylation, lipoprotein, endosome DYNA; HET: GDP; 2.5A {Homo sapiens}
Probab=98.22 E-value=8.2e-07 Score=46.31 Aligned_cols=21 Identities=29% Similarity=0.243 Sum_probs=18.6
Q ss_pred eeEEcCCCCcHHHHHHHHHhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQ 22 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~ 22 (79)
++|+|.+|+|||||++.+.+.
T Consensus 37 i~vvG~~~vGKSsli~~l~~~ 57 (214)
T 2j1l_A 37 VVLVGDGGCGKTSLLMVFADG 57 (214)
T ss_dssp EEEEECTTSSHHHHHHHHHC-
T ss_pred EEEECcCCCCHHHHHHHHHcC
Confidence 689999999999999999864
No 403
>3foz_A TRNA delta(2)-isopentenylpyrophosphate transferas; nucleoside modification, isopentenyl-tRNA transferase, transferase-RNA complex; 2.50A {Escherichia coli k-12} PDB: 2zxu_A* 2zm5_A
Probab=98.21 E-value=8.5e-07 Score=49.21 Aligned_cols=23 Identities=35% Similarity=0.238 Sum_probs=20.1
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
+.|+||+|||||||+..+.....
T Consensus 13 i~i~GptgsGKt~la~~La~~~~ 35 (316)
T 3foz_A 13 IFLMGPTASGKTALAIELRKILP 35 (316)
T ss_dssp EEEECCTTSCHHHHHHHHHHHSC
T ss_pred EEEECCCccCHHHHHHHHHHhCC
Confidence 67899999999999999987654
No 404
>2f7s_A C25KG, RAS-related protein RAB-27B; G-protein, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GDP; 2.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 2iez_A*
Probab=98.21 E-value=9.2e-07 Score=46.01 Aligned_cols=21 Identities=33% Similarity=0.156 Sum_probs=19.1
Q ss_pred eeEEcCCCCcHHHHHHHHHhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQ 22 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~ 22 (79)
++|+|+.|+|||||++.+.+.
T Consensus 28 i~vvG~~~~GKSsLi~~l~~~ 48 (217)
T 2f7s_A 28 LLALGDSGVGKTTFLYRYTDN 48 (217)
T ss_dssp EEEESCTTSSHHHHHHHHHCS
T ss_pred EEEECcCCCCHHHHHHHHhcC
Confidence 689999999999999999865
No 405
>2q3h_A RAS homolog gene family, member U; GTPase, structural genomics, structural genomics consortium,; HET: GDP; 1.73A {Homo sapiens}
Probab=98.21 E-value=9.7e-07 Score=45.38 Aligned_cols=22 Identities=32% Similarity=0.172 Sum_probs=18.4
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|..|+|||||++.+.+..
T Consensus 23 i~~~G~~~~GKssl~~~l~~~~ 44 (201)
T 2q3h_A 23 CVLVGDGAVGKTSLVVSYTTNG 44 (201)
T ss_dssp EEEECSTTSSHHHHHHHHHC--
T ss_pred EEEECCCCCCHHHHHHHHHhCC
Confidence 6799999999999999987653
No 406
>2h57_A ADP-ribosylation factor-like protein 6; GTP, GTPase, membrane trafficking, structural genomics consortium, SGC, transport protein; HET: GTP; 2.00A {Homo sapiens}
Probab=98.20 E-value=5e-07 Score=46.14 Aligned_cols=22 Identities=27% Similarity=0.208 Sum_probs=20.0
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|..|+|||||++.+.+..
T Consensus 24 i~v~G~~~~GKSsli~~l~~~~ 45 (190)
T 2h57_A 24 VLCLGLDNSGKTTIINKLKPSN 45 (190)
T ss_dssp EEEEECTTSSHHHHHHHTSCGG
T ss_pred EEEECCCCCCHHHHHHHHhcCC
Confidence 6899999999999999998765
No 407
>2gco_A H9, RHO-related GTP-binding protein RHOC; GTPase,signaling protein, signaling Pro; HET: GNP; 1.40A {Homo sapiens} PDB: 2gcn_A* 2gcp_A* 1z2c_A* 1x86_B 2rgn_C* 1lb1_B 1s1c_A* 3kz1_E* 3lxr_A* 3lwn_A* 3lw8_A* 1cxz_A* 1a2b_A* 1ow3_B* 1ftn_A* 1cc0_A* 3msx_A* 1xcg_B 3t06_B 1tx4_B* ...
Probab=98.20 E-value=1e-06 Score=45.42 Aligned_cols=22 Identities=23% Similarity=0.181 Sum_probs=19.7
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|.+|+|||||++.+.+..
T Consensus 28 i~vvG~~~~GKSsli~~l~~~~ 49 (201)
T 2gco_A 28 LVIVGDGACGKTCLLIVFSKDQ 49 (201)
T ss_dssp EEEEESTTSSHHHHHHHHHHSS
T ss_pred EEEECCCCCCHHHHHHHHHhCc
Confidence 6899999999999999998753
No 408
>2aka_B Dynamin-1; fusion protein, GTPase domain, myosin, contractIle protein; 1.90A {Rattus norvegicus} SCOP: c.37.1.8 PDB: 3l43_A*
Probab=98.20 E-value=9e-07 Score=48.15 Aligned_cols=22 Identities=14% Similarity=0.107 Sum_probs=20.4
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|.+|+|||||++.+.|..
T Consensus 29 i~vvG~~~~GKSSLln~l~g~~ 50 (299)
T 2aka_B 29 IAVVGGQSAGKSSVLENFVGRD 50 (299)
T ss_dssp EEEEEBTTSCHHHHHHHHHTSC
T ss_pred EEEEeCCCCCHHHHHHHHHCCC
Confidence 6899999999999999999865
No 409
>3sr0_A Adenylate kinase; phosphoryl transfer analogue, ALF4, transferase (phosphotran phosphoryl transfer, nucleotide-binding; HET: ADP AMP; 1.56A {Aquifex aeolicus} PDB: 2rh5_A 2rgx_A*
Probab=98.20 E-value=1e-06 Score=46.17 Aligned_cols=22 Identities=23% Similarity=0.164 Sum_probs=19.4
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
+.|+||.||||+|.++.|...+
T Consensus 3 Iil~GpPGsGKgTqa~~La~~~ 24 (206)
T 3sr0_A 3 LVFLGPPGAGKGTQAKRLAKEK 24 (206)
T ss_dssp EEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHH
Confidence 6788999999999999997664
No 410
>2chg_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATPase, ATP-binding, nucleotide-binding; HET: ANP; 2.1A {Archaeoglobus fulgidus}
Probab=98.19 E-value=1.3e-06 Score=45.11 Aligned_cols=22 Identities=27% Similarity=0.179 Sum_probs=19.4
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
+.|.||.|+||||+++.+....
T Consensus 41 ~ll~G~~G~GKT~l~~~l~~~~ 62 (226)
T 2chg_A 41 LLFSGPPGTGKTATAIALARDL 62 (226)
T ss_dssp EEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHH
Confidence 5689999999999999998764
No 411
>3umf_A Adenylate kinase; rossmann fold, transferase; 2.05A {Schistosoma mansoni}
Probab=98.19 E-value=1.1e-06 Score=46.41 Aligned_cols=22 Identities=18% Similarity=0.060 Sum_probs=19.2
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
+.|+||.||||+|.++.|...+
T Consensus 32 I~llGpPGsGKgTqa~~L~~~~ 53 (217)
T 3umf_A 32 IFVLGGPGSGKGTQCEKLVQKF 53 (217)
T ss_dssp EEEECCTTCCHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHH
Confidence 5688999999999999987654
No 412
>2atx_A Small GTP binding protein TC10; GTPase, P-loop, alpha-beta, hydrolase; HET: GNP; 2.65A {Homo sapiens} SCOP: c.37.1.8
Probab=98.19 E-value=1.2e-06 Score=44.79 Aligned_cols=22 Identities=32% Similarity=0.214 Sum_probs=19.5
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++++|++|+|||||++.+.+..
T Consensus 21 i~v~G~~~~GKssli~~l~~~~ 42 (194)
T 2atx_A 21 CVVVGDGAVGKTCLLMSYANDA 42 (194)
T ss_dssp EEEEECTTSSHHHHHHHHHHSS
T ss_pred EEEECCCCCCHHHHHHHHhcCC
Confidence 6899999999999999998653
No 413
>2v1u_A Cell division control protein 6 homolog; DNA replication, nucleotide-binding, replication, archaea; HET: ADP; 3.10A {Aeropyrum pernix}
Probab=98.18 E-value=1.1e-06 Score=48.97 Aligned_cols=23 Identities=39% Similarity=0.593 Sum_probs=20.4
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
+.|+||+|+||||+++.+.....
T Consensus 47 vll~G~~G~GKT~l~~~~~~~~~ 69 (387)
T 2v1u_A 47 ALLYGLTGTGKTAVARLVLRRLE 69 (387)
T ss_dssp EEECBCTTSSHHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHH
Confidence 56899999999999999988764
No 414
>2g3y_A GTP-binding protein GEM; small GTPase, GDP, inactive state, RGK family, structur genomics, structural genomics consortium, SGC, signaling PR; HET: GDP; 2.40A {Homo sapiens} SCOP: c.37.1.8
Probab=98.18 E-value=1.2e-06 Score=45.97 Aligned_cols=21 Identities=43% Similarity=0.447 Sum_probs=18.9
Q ss_pred eeEEcCCCCcHHHHHHHHHhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQ 22 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~ 22 (79)
++|+|.+|+|||||++.+.+.
T Consensus 40 VvlvG~~~vGKSSLl~r~~~~ 60 (211)
T 2g3y_A 40 VVLIGEQGVGKSTLANIFAGV 60 (211)
T ss_dssp EEEECCTTSSHHHHHHHHHCC
T ss_pred EEEECCCCCCHHHHHHHHHhC
Confidence 689999999999999999863
No 415
>3t15_A Ribulose bisphosphate carboxylase/oxygenase activ chloroplastic; photosynthesis, rubisco activase, AAA+ protein; 2.95A {Nicotiana tabacum} PDB: 3zw6_A
Probab=98.18 E-value=1.3e-06 Score=47.89 Aligned_cols=23 Identities=22% Similarity=0.322 Sum_probs=19.7
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
+.+.||+|+|||+++++++....
T Consensus 39 lLl~GppGtGKT~la~aiA~~l~ 61 (293)
T 3t15_A 39 LGIWGGKGQGKSFQCELVFRKMG 61 (293)
T ss_dssp EEEEECTTSCHHHHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHHHhC
Confidence 34679999999999999998764
No 416
>2b6h_A ADP-ribosylation factor 5; membrane trafficking, GDP, structural genomics, structural G consortium, SGC, protein transport; HET: GDP; 1.76A {Homo sapiens} SCOP: c.37.1.8 PDB: 1z6x_A* 3aq4_A*
Probab=98.17 E-value=8.9e-07 Score=45.47 Aligned_cols=21 Identities=24% Similarity=0.216 Sum_probs=18.7
Q ss_pred eeEEcCCCCcHHHHHHHHHhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQ 22 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~ 22 (79)
++|+|++|+|||||++.+.+.
T Consensus 32 i~v~G~~~vGKSsLi~~l~~~ 52 (192)
T 2b6h_A 32 ILMVGLDAAGKTTILYKLKLG 52 (192)
T ss_dssp EEEEESTTSSHHHHHHHHCSS
T ss_pred EEEECCCCCCHHHHHHHHHhC
Confidence 689999999999999999653
No 417
>3ice_A Transcription termination factor RHO; transcription, ATPase, hexamer, helicase, RNA, RECA, OB fold ATP-binding, hydrolase; HET: MSE ADP SPD; 2.80A {Escherichia coli k-12} PDB: 1pv4_A 1pvo_A* 1xpo_A* 1xpr_A* 1xpu_A* 2ht1_A
Probab=98.17 E-value=1.4e-06 Score=49.85 Aligned_cols=23 Identities=17% Similarity=0.160 Sum_probs=20.7
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
++|+|++|+|||||++.|.+.+.
T Consensus 177 ~~IvG~sG~GKTtLl~~Iar~i~ 199 (422)
T 3ice_A 177 GLIVAPPKAGKTMLLQNIAQSIA 199 (422)
T ss_dssp EEEECCSSSSHHHHHHHHHHHHH
T ss_pred EEEecCCCCChhHHHHHHHHHHh
Confidence 68999999999999999988764
No 418
>3hws_A ATP-dependent CLP protease ATP-binding subunit CL; CLPXP, AAA+ molecular machine, hexamer, asymmetric,, ATP-BIN chaperone, metal-binding; HET: ADP; 3.25A {Escherichia coli} PDB: 3hte_A
Probab=98.17 E-value=1.5e-06 Score=48.73 Aligned_cols=22 Identities=36% Similarity=0.302 Sum_probs=19.8
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
+.+.||+|+|||+++++|....
T Consensus 54 vll~GppGtGKT~la~~ia~~~ 75 (363)
T 3hws_A 54 ILLIGPTGSGKTLLAETLARLL 75 (363)
T ss_dssp EEEECCTTSSHHHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHHHc
Confidence 5688999999999999998875
No 419
>4edh_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology; HET: TMP ADP; 1.32A {Pseudomonas aeruginosa PAO1} PDB: 4e5u_A* 4esh_A* 4gmd_A* 3uwk_A* 3uwo_A* 3uxm_A*
Probab=98.17 E-value=1.3e-06 Score=45.95 Aligned_cols=25 Identities=28% Similarity=0.465 Sum_probs=21.5
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQ 25 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~ 25 (79)
++.|.|+.||||||+++.+...+..
T Consensus 8 ~i~~eG~~gsGKsT~~~~l~~~l~~ 32 (213)
T 4edh_A 8 FVTLEGPEGAGKSTNRDYLAERLRE 32 (213)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHT
T ss_pred EEEEEcCCCCCHHHHHHHHHHHHHH
Confidence 3678899999999999999877654
No 420
>3eph_A TRNA isopentenyltransferase; transferase, alternative initiation, ATP-binding, cytoplasm, mitochondrion, nucleotide-binding, nucleus; 2.95A {Saccharomyces cerevisiae} PDB: 3epj_A 3epk_A* 3epl_A*
Probab=98.16 E-value=1.1e-06 Score=50.31 Aligned_cols=24 Identities=21% Similarity=0.320 Sum_probs=20.2
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
+++|.||+|+|||||+..|.....
T Consensus 4 ~i~i~GptgsGKttla~~La~~~~ 27 (409)
T 3eph_A 4 VIVIAGTTGVGKSQLSIQLAQKFN 27 (409)
T ss_dssp EEEEEECSSSSHHHHHHHHHHHHT
T ss_pred EEEEECcchhhHHHHHHHHHHHCC
Confidence 368999999999999999876543
No 421
>2fu5_C RAS-related protein RAB-8A; MSS4:RAB8 protein complex, GEF:GTPase nucleotide free complex; 2.00A {Mus musculus} SCOP: c.37.1.8 PDB: 3qbt_A* 3tnf_A*
Probab=98.16 E-value=6.1e-07 Score=45.42 Aligned_cols=21 Identities=33% Similarity=0.175 Sum_probs=8.3
Q ss_pred eeEEcCCCCcHHHHHHHHHhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQ 22 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~ 22 (79)
++|+|++|+|||||++.+.+.
T Consensus 11 i~v~G~~~~GKssl~~~l~~~ 31 (183)
T 2fu5_C 11 LLLIGDSGVGKTCVLFRFSED 31 (183)
T ss_dssp EEEECCCCC------------
T ss_pred EEEECCCCCCHHHHHHHHHhC
Confidence 689999999999999998765
No 422
>1d2n_A N-ethylmaleimide-sensitive fusion protein; hexamerization domain, ATPase, transport; HET: ANP; 1.75A {Cricetulus griseus} SCOP: c.37.1.20 PDB: 1nsf_A*
Probab=98.16 E-value=1.6e-06 Score=46.77 Aligned_cols=22 Identities=32% Similarity=0.258 Sum_probs=19.3
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
+-|+||+|+|||++++.+....
T Consensus 67 vLl~G~~GtGKT~la~~ia~~~ 88 (272)
T 1d2n_A 67 VLLEGPPHSGKTALAAKIAEES 88 (272)
T ss_dssp EEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCcHHHHHHHHHHHh
Confidence 4578999999999999998864
No 423
>2hup_A RAS-related protein RAB-43; G-protein, GDP, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GDP; 2.05A {Homo sapiens}
Probab=98.16 E-value=1.5e-06 Score=44.90 Aligned_cols=22 Identities=27% Similarity=0.194 Sum_probs=19.4
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|..|+|||||++.+.+..
T Consensus 32 i~vvG~~~vGKSsli~~l~~~~ 53 (201)
T 2hup_A 32 LVLVGDASVGKTCVVQRFKTGA 53 (201)
T ss_dssp EEEEECTTSSHHHHHHHHHHSC
T ss_pred EEEECcCCCCHHHHHHHHhhCC
Confidence 6899999999999999997653
No 424
>3cnl_A YLQF, putative uncharacterized protein; circular permutation, GNP, signaling protein; HET: GNP; 2.00A {Thermotoga maritima} PDB: 3cnn_A* 3cno_A*
Probab=98.15 E-value=1.4e-06 Score=47.12 Aligned_cols=23 Identities=22% Similarity=0.289 Sum_probs=20.7
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
++++|.+|+|||||++.+.+...
T Consensus 102 v~~vG~~~vGKSslin~l~~~~~ 124 (262)
T 3cnl_A 102 VLIVGVPNTGKSTIINKLKGKRA 124 (262)
T ss_dssp EEEEESTTSSHHHHHHHHHTTCC
T ss_pred eEEeCCCCCCHHHHHHHHhcccc
Confidence 68999999999999999998654
No 425
>2dy1_A Elongation factor G; translocation, GTP complex, structural genomics, NPPSFA; HET: GTP; 1.60A {Thermus thermophilus} SCOP: b.43.3.1 c.37.1.8 d.14.1.1 d.58.11.1 d.58.11.1 PDB: 1wdt_A*
Probab=98.15 E-value=1.5e-06 Score=52.38 Aligned_cols=23 Identities=30% Similarity=0.251 Sum_probs=20.4
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
++|+|++|+|||||++.+.+...
T Consensus 12 i~IiG~~gaGKTTLl~~L~~~~~ 34 (665)
T 2dy1_A 12 VALVGHAGSGKTTLTEALLYKTG 34 (665)
T ss_dssp EEEEESTTSSHHHHHHHHHHHTT
T ss_pred EEEECCCCChHHHHHHHHHHhcC
Confidence 78999999999999999996543
No 426
>2ocp_A DGK, deoxyguanosine kinase; protein-nucleotide complex, transferase; HET: DTP; 2.80A {Homo sapiens} SCOP: c.37.1.1
Probab=98.15 E-value=1.3e-06 Score=46.46 Aligned_cols=23 Identities=22% Similarity=0.322 Sum_probs=20.4
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhh
Q 044571 1 MEGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~ 23 (79)
+++|.|+.||||||+++.|...+
T Consensus 4 ~i~~~G~~g~GKtt~~~~l~~~l 26 (241)
T 2ocp_A 4 RLSIEGNIAVGKSTFVKLLTKTY 26 (241)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHC
T ss_pred EEEEEcCCCCCHHHHHHHHHHHc
Confidence 37899999999999999998765
No 427
>3cpj_B GTP-binding protein YPT31/YPT8; RAB GTPase, prenylation, vesicular transport, acetylation, golgi apparatus, lipoprotein, membrane; HET: GDP; 2.35A {Saccharomyces cerevisiae}
Probab=98.15 E-value=1.7e-06 Score=45.29 Aligned_cols=22 Identities=32% Similarity=0.209 Sum_probs=19.6
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|+.|+|||||++.+.+..
T Consensus 16 i~v~G~~~vGKSsli~~l~~~~ 37 (223)
T 3cpj_B 16 IVLIGDSGVGKSNLLSRFTKNE 37 (223)
T ss_dssp EEEESCTTSSHHHHHHHHHHCC
T ss_pred EEEECcCCCCHHHHHHHHhcCC
Confidence 6899999999999999998753
No 428
>3syl_A Protein CBBX; photosynthesis, rubisco activase, AAA+ protein, calvin cycle chaperone; 3.00A {Rhodobacter sphaeroides} PDB: 3syk_A 3zuh_A*
Probab=98.15 E-value=1.5e-06 Score=47.42 Aligned_cols=24 Identities=29% Similarity=0.285 Sum_probs=20.2
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhcc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLRQ 25 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~~ 25 (79)
+-|+||+|+|||++++.+...+..
T Consensus 70 vll~G~~GtGKT~la~~la~~l~~ 93 (309)
T 3syl_A 70 MSFTGNPGTGKTTVALKMAGLLHR 93 (309)
T ss_dssp EEEEECTTSSHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHHh
Confidence 458899999999999988877643
No 429
>3lv8_A DTMP kinase, thymidylate kinase; structural genomics, in diseases, center for structural genomics of infectious DISE ATP-binding; HET: ADP TMP TYD; 1.80A {Vibrio cholerae o1 biovar eltor} PDB: 3n2i_A*
Probab=98.15 E-value=1.2e-06 Score=46.78 Aligned_cols=26 Identities=27% Similarity=0.336 Sum_probs=22.0
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhccc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQE 26 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~ 26 (79)
++.|.|++||||||+++.+...+...
T Consensus 29 ~i~~eG~~GsGKsT~~~~l~~~l~~~ 54 (236)
T 3lv8_A 29 FIVIEGLEGAGKSTAIQVVVETLQQN 54 (236)
T ss_dssp EEEEEESTTSCHHHHHHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHhc
Confidence 36789999999999999998876543
No 430
>3q3j_B RHO-related GTP-binding protein RHO6; RAS-binding domain, plexin, small GTPase, structural genomic consortium, SGC; HET: GNP; 1.97A {Homo sapiens} PDB: 2rex_B* 2cls_A*
Probab=98.15 E-value=1.8e-06 Score=45.09 Aligned_cols=21 Identities=24% Similarity=0.248 Sum_probs=19.0
Q ss_pred eeEEcCCCCcHHHHHHHHHhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQ 22 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~ 22 (79)
++|+|.+|+|||||++.+.+.
T Consensus 30 i~vvG~~~vGKSsL~~~l~~~ 50 (214)
T 3q3j_B 30 LVLVGDVQCGKTAMLQVLAKD 50 (214)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECcCCCCHHHHHHHHhcC
Confidence 679999999999999998765
No 431
>4dcu_A GTP-binding protein ENGA; GTPase, GDP, protein binding, hydrolase; HET: GDP; 2.00A {Bacillus subtilis} PDB: 4dct_A* 4dcs_A* 4dcv_A* 2hjg_A*
Probab=98.14 E-value=9.6e-07 Score=50.97 Aligned_cols=22 Identities=27% Similarity=0.379 Sum_probs=20.1
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|.+|+|||||++.+.+..
T Consensus 26 V~lvG~~nvGKSTL~n~l~~~~ 47 (456)
T 4dcu_A 26 VAIVGRPNVGKSTIFNRIAGER 47 (456)
T ss_dssp EEEECSSSSSHHHHHHHHEEEE
T ss_pred EEEECCCCCcHHHHHHHHhCCC
Confidence 7899999999999999998854
No 432
>4gzl_A RAS-related C3 botulinum toxin substrate 1; rossmann fold, GTP binding, membrane, hydrolase; HET: GNP; 2.00A {Homo sapiens} PDB: 3th5_A* 4gzm_A*
Probab=98.14 E-value=1.7e-06 Score=44.81 Aligned_cols=21 Identities=29% Similarity=0.153 Sum_probs=18.7
Q ss_pred eeEEcCCCCcHHHHHHHHHhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQ 22 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~ 22 (79)
++++|.+|+|||||++.+.+.
T Consensus 33 i~vvG~~~~GKSsLi~~l~~~ 53 (204)
T 4gzl_A 33 CVVVGDGAVGKTCLLISYTTN 53 (204)
T ss_dssp EEEEESTTSSHHHHHHHHHHS
T ss_pred EEEECcCCCCHHHHHHHHHhC
Confidence 689999999999999988754
No 433
>2qmh_A HPR kinase/phosphorylase; V267F mutation, ATP-binding, carbohydrate metabolism, magnesium, metal-binding, multifunctional enzyme; 2.60A {Lactobacillus casei} PDB: 1jb1_A 1kkl_A 1kkm_A*
Probab=98.14 E-value=1.4e-06 Score=45.65 Aligned_cols=21 Identities=29% Similarity=0.115 Sum_probs=18.5
Q ss_pred eeEEcCCCCcHHHHHHHHHhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQ 22 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~ 22 (79)
+.|+||+|+|||||+..+...
T Consensus 37 ilI~GpsGsGKStLA~~La~~ 57 (205)
T 2qmh_A 37 VLITGDSGVGKSETALELVQR 57 (205)
T ss_dssp EEEECCCTTTTHHHHHHHHTT
T ss_pred EEEECCCCCCHHHHHHHHHHh
Confidence 578999999999999988764
No 434
>1xwi_A SKD1 protein; VPS4B, AAA ATPase, protein transport; 2.80A {Homo sapiens}
Probab=98.14 E-value=1.9e-06 Score=47.80 Aligned_cols=22 Identities=32% Similarity=0.359 Sum_probs=19.6
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
+-|.||.|+|||++++.+....
T Consensus 48 iLL~GppGtGKT~la~ala~~~ 69 (322)
T 1xwi_A 48 ILLFGPPGTGKSYLAKAVATEA 69 (322)
T ss_dssp EEEESSSSSCHHHHHHHHHHHT
T ss_pred EEEECCCCccHHHHHHHHHHHc
Confidence 4578999999999999999875
No 435
>3pvs_A Replication-associated recombination protein A; maintenance of genome stability Pro recombination; 2.50A {Escherichia coli}
Probab=98.12 E-value=2.1e-06 Score=49.59 Aligned_cols=24 Identities=33% Similarity=0.380 Sum_probs=20.7
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhcc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLRQ 25 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~~ 25 (79)
+-|+||+|+||||+++.|......
T Consensus 53 vLL~GppGtGKTtlAr~ia~~~~~ 76 (447)
T 3pvs_A 53 MILWGPPGTGKTTLAEVIARYANA 76 (447)
T ss_dssp EEEECSTTSSHHHHHHHHHHHTTC
T ss_pred EEEECCCCCcHHHHHHHHHHHhCC
Confidence 468899999999999999987643
No 436
>1ofh_A ATP-dependent HSL protease ATP-binding subunit HSLU; chaperone, hydrolase, ATP-binding; HET: ADP; 2.5A {Haemophilus influenzae} SCOP: c.37.1.20 PDB: 1ofi_A*
Probab=98.12 E-value=2.1e-06 Score=46.75 Aligned_cols=23 Identities=26% Similarity=0.248 Sum_probs=20.2
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
+-|+||+|+|||++++.+.....
T Consensus 53 vll~G~~GtGKT~la~~la~~l~ 75 (310)
T 1ofh_A 53 ILMIGPTGVGKTEIARRLAKLAN 75 (310)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHHHhC
Confidence 45889999999999999988764
No 437
>3gmt_A Adenylate kinase; ssgcid, ATP-BIN cytoplasm, nucleotide biosynthesis, nucleotide-BIND transferase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=98.12 E-value=2.3e-06 Score=45.63 Aligned_cols=22 Identities=36% Similarity=0.459 Sum_probs=19.4
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
+||+|+.||||||+++.|...+
T Consensus 11 ~~~~G~pGsGKsT~a~~L~~~~ 32 (230)
T 3gmt_A 11 LILLGAPGAGKGTQANFIKEKF 32 (230)
T ss_dssp EEEECCTTSCHHHHHHHHHHHH
T ss_pred eeeECCCCCCHHHHHHHHHHHh
Confidence 6899999999999999987654
No 438
>2j0v_A RAC-like GTP-binding protein ARAC7; nucleotide-binding protein, ROP9, atrac7, membrane, palmitate, RHO GTPase; HET: GDP; 1.78A {Arabidopsis thaliana}
Probab=98.11 E-value=2.1e-06 Score=44.53 Aligned_cols=22 Identities=23% Similarity=0.086 Sum_probs=19.4
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|.+|+|||||++.+.+..
T Consensus 12 i~i~G~~~~GKTsli~~l~~~~ 33 (212)
T 2j0v_A 12 CVTVGDGAVGKTCMLICYTSNK 33 (212)
T ss_dssp EEEEESTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHhcCC
Confidence 6899999999999999987653
No 439
>3tqf_A HPR(Ser) kinase; transferase, hydrolase; 2.80A {Coxiella burnetii}
Probab=98.11 E-value=2.2e-06 Score=44.06 Aligned_cols=20 Identities=20% Similarity=0.192 Sum_probs=17.1
Q ss_pred eeEEcCCCCcHHHHHHHHHh
Q 044571 2 EGLYGISCVGKTTLANFVGN 21 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g 21 (79)
+.|.|+||+||||++-.+..
T Consensus 19 vli~G~SGaGKStlal~L~~ 38 (181)
T 3tqf_A 19 VLITGEANIGKSELSLALID 38 (181)
T ss_dssp EEEEESSSSSHHHHHHHHHH
T ss_pred EEEEcCCCCCHHHHHHHHHH
Confidence 46889999999999987754
No 440
>3d8b_A Fidgetin-like protein 1; AAA+, ATPase, ADP, SGC, structural genomics consortium, ATP- hydrolase, magnesium, metal-binding, nucleotide-binding; HET: ADP; 2.00A {Homo sapiens}
Probab=98.10 E-value=2.4e-06 Score=47.90 Aligned_cols=23 Identities=26% Similarity=0.332 Sum_probs=19.9
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
+.|+||+|+||||+++.+.....
T Consensus 120 vLl~GppGtGKT~la~aia~~~~ 142 (357)
T 3d8b_A 120 ILLFGPPGTGKTLIGKCIASQSG 142 (357)
T ss_dssp EEEESSTTSSHHHHHHHHHHHTT
T ss_pred EEEECCCCCCHHHHHHHHHHHcC
Confidence 45889999999999999988653
No 441
>3p32_A Probable GTPase RV1496/MT1543; structural genomics, seattle structural genomics center for infectious disease, ssgcid, MEAB, MMAA; HET: GDP PGE; 1.90A {Mycobacterium tuberculosis} PDB: 3md0_A* 4gt1_A* 3nxs_A* 3tk1_A*
Probab=98.10 E-value=2e-06 Score=48.30 Aligned_cols=23 Identities=35% Similarity=0.540 Sum_probs=20.2
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhh
Q 044571 1 MEGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~ 23 (79)
+++|+|++|+|||||+..+...+
T Consensus 81 ~I~i~G~~G~GKSTl~~~L~~~l 103 (355)
T 3p32_A 81 RVGITGVPGVGKSTAIEALGMHL 103 (355)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
Confidence 37899999999999999987664
No 442
>3pfi_A Holliday junction ATP-dependent DNA helicase RUVB; probable holliday junction DNA helicase; HET: ADP; 2.69A {Campylobacter jejuni subsp}
Probab=98.10 E-value=2.8e-06 Score=46.98 Aligned_cols=23 Identities=35% Similarity=0.440 Sum_probs=19.9
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
+-|.||+|+||||+++.+.....
T Consensus 58 vll~G~~GtGKT~la~~ia~~~~ 80 (338)
T 3pfi_A 58 ILFSGPAGLGKTTLANIISYEMS 80 (338)
T ss_dssp EEEECSTTSSHHHHHHHHHHHTT
T ss_pred EEEECcCCCCHHHHHHHHHHHhC
Confidence 56889999999999999987653
No 443
>3eie_A Vacuolar protein sorting-associated protein 4; AAA ATPase, ATP-binding cassette, ATP-binding, endosome, MEM nucleotide-binding; 2.70A {Saccharomyces cerevisiae} PDB: 3eih_A* 2rko_A 3mhv_C
Probab=98.10 E-value=2.4e-06 Score=47.21 Aligned_cols=23 Identities=35% Similarity=0.387 Sum_probs=19.9
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
+-|.||+|+|||++++++.....
T Consensus 54 vLl~GppGtGKT~la~aia~~~~ 76 (322)
T 3eie_A 54 ILLYGPPGTGKSYLAKAVATEAN 76 (322)
T ss_dssp EEEECSSSSCHHHHHHHHHHHHT
T ss_pred EEEECCCCCcHHHHHHHHHHHHC
Confidence 45789999999999999988753
No 444
>3v9p_A DTMP kinase, thymidylate kinase; ssgcid, STRU genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia thailandensis}
Probab=98.09 E-value=1.1e-06 Score=46.73 Aligned_cols=25 Identities=28% Similarity=0.419 Sum_probs=18.2
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQ 25 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~ 25 (79)
++.|.|++||||||+++.+...+..
T Consensus 27 ~I~~eG~~GsGKsT~~~~l~~~l~~ 51 (227)
T 3v9p_A 27 FITFEGIDGAGKTTHLQWFCDRLQE 51 (227)
T ss_dssp EEEEECCC---CHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHh
Confidence 3678899999999999999877653
No 445
>1p5z_B DCK, deoxycytidine kinase; nucleoside kinase, P-loop, ARAC, cytarabine, transferase; HET: AR3 ADP; 1.60A {Homo sapiens} SCOP: c.37.1.1 PDB: 1p60_A* 1p61_B* 1p62_B* 2a7q_A* 2qrn_A* 2qro_A* 3exk_A* 3hp1_A* 2no7_A* 2no1_A* 2no6_A* 2no0_A* 2no9_A* 2noa_A* 2zi5_A* 2zi4_A* 2zi6_A* 2zi7_B* 2zia_A* 3kfx_A* ...
Probab=98.09 E-value=8.4e-07 Score=47.74 Aligned_cols=23 Identities=22% Similarity=0.263 Sum_probs=20.0
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhh
Q 044571 1 MEGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~ 23 (79)
+++|.|+.||||||+++.|...+
T Consensus 26 ~I~ieG~~GsGKST~~~~L~~~l 48 (263)
T 1p5z_B 26 KISIEGNIAAGKSTFVNILKQLC 48 (263)
T ss_dssp EEEEECSTTSSHHHHHTTTGGGC
T ss_pred EEEEECCCCCCHHHHHHHHHHhc
Confidence 36889999999999999987665
No 446
>3ld9_A DTMP kinase, thymidylate kinase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 2.15A {Ehrlichia chaffeensis}
Probab=98.09 E-value=2.2e-06 Score=45.49 Aligned_cols=25 Identities=28% Similarity=0.397 Sum_probs=21.5
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQ 25 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~ 25 (79)
++.+.|++||||||+++.+...+..
T Consensus 23 ~i~~~G~~g~GKst~~~~l~~~l~~ 47 (223)
T 3ld9_A 23 FITFEGIDGSGKTTQSHLLAEYLSE 47 (223)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHhh
Confidence 3678899999999999999887654
No 447
>4tmk_A Protein (thymidylate kinase); ATP:DTMP phosphotransferase, transferase; HET: T5A; 1.98A {Escherichia coli} SCOP: c.37.1.1 PDB: 5tmp_A*
Probab=98.09 E-value=2e-06 Score=45.33 Aligned_cols=26 Identities=35% Similarity=0.307 Sum_probs=22.0
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhccc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQE 26 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~~ 26 (79)
++.+.|++||||||+++.+...+...
T Consensus 5 ~i~~eG~~gsGKsT~~~~l~~~l~~~ 30 (213)
T 4tmk_A 5 YIVIEGLEGAGKTTARNVVVETLEQL 30 (213)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHc
Confidence 36788999999999999998877543
No 448
>2yc2_C IFT27, small RAB-related GTPase; transport protein, cilium, IFT complex; 2.59A {Chlamydomonas reinhardtii} PDB: 2yc4_C
Probab=98.08 E-value=6.1e-07 Score=46.18 Aligned_cols=21 Identities=24% Similarity=0.417 Sum_probs=3.3
Q ss_pred eeEEcCCCCcHHHHHHHHHhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQ 22 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~ 22 (79)
++|+|++|+|||||++.+.+.
T Consensus 23 i~v~G~~~~GKssli~~l~~~ 43 (208)
T 2yc2_C 23 VAVVGEATVGKSALISMFTSK 43 (208)
T ss_dssp EEEC-----------------
T ss_pred EEEECCCCCCHHHHHHHHHhC
Confidence 679999999999999988776
No 449
>2qby_B CDC6 homolog 3, cell division control protein 6 homolog 3; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus}
Probab=98.08 E-value=2.6e-06 Score=47.69 Aligned_cols=22 Identities=23% Similarity=0.493 Sum_probs=19.9
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
+.|.||+|+||||+++.+....
T Consensus 48 vll~G~~G~GKT~la~~l~~~~ 69 (384)
T 2qby_B 48 NLFLGLTGTGKTFVSKYIFNEI 69 (384)
T ss_dssp EEEEECTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHH
Confidence 5689999999999999998875
No 450
>2qp9_X Vacuolar protein sorting-associated protein 4; ATPase domain, beta domain, C-terminal helix, ATP-binding, E nucleotide-binding; 2.90A {Saccharomyces cerevisiae} PDB: 2qpa_A*
Probab=98.07 E-value=2.9e-06 Score=47.59 Aligned_cols=23 Identities=35% Similarity=0.387 Sum_probs=20.2
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
+-|.||.|+|||++++.++....
T Consensus 87 iLL~GppGtGKT~la~ala~~~~ 109 (355)
T 2qp9_X 87 ILLYGPPGTGKSYLAKAVATEAN 109 (355)
T ss_dssp EEEECSTTSCHHHHHHHHHHHHT
T ss_pred EEEECCCCCcHHHHHHHHHHHhC
Confidence 46889999999999999998764
No 451
>4djt_A GTP-binding nuclear protein GSP1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, RAN family; HET: GDP; 1.80A {Encephalitozoon cuniculi}
Probab=98.07 E-value=5.8e-07 Score=46.81 Aligned_cols=21 Identities=43% Similarity=0.287 Sum_probs=18.8
Q ss_pred eeEEcCCCCcHHHHHHHHHhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQ 22 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~ 22 (79)
++|+|.+|+|||||++.+.+.
T Consensus 14 i~vvG~~~~GKSsli~~l~~~ 34 (218)
T 4djt_A 14 ICLIGDGGVGKTTYINRVLDG 34 (218)
T ss_dssp EEEECCTTSSHHHHHCBCTTC
T ss_pred EEEECCCCCCHHHHHHHHhcC
Confidence 689999999999999998754
No 452
>2x77_A ADP-ribosylation factor; GTP-binding protein, small GTPase, nucleotide-binding; HET: GDP; 2.10A {Leishmania major}
Probab=98.07 E-value=1.1e-06 Score=44.85 Aligned_cols=20 Identities=20% Similarity=0.217 Sum_probs=18.1
Q ss_pred eeEEcCCCCcHHHHHHHHHh
Q 044571 2 EGLYGISCVGKTTLANFVGN 21 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g 21 (79)
++++|++|+|||||++.+.+
T Consensus 25 i~v~G~~~~GKssli~~l~~ 44 (189)
T 2x77_A 25 VLMLGLDNAGKTSILYRLHL 44 (189)
T ss_dssp EEEEEETTSSHHHHHHHTCC
T ss_pred EEEECCCCCCHHHHHHHHHc
Confidence 68999999999999999854
No 453
>1ypw_A Transitional endoplasmic reticulum ATPase; AAA, P97/VCP, ERAD, CDC48; HET: ADP ANP; 3.50A {Mus musculus} PDB: 1oz4_A* 1yq0_A* 1yqi_A* 1r7r_A* 3cf2_A* 3cf1_A* 3cf3_A*
Probab=98.07 E-value=1.6e-06 Score=53.25 Aligned_cols=25 Identities=32% Similarity=0.422 Sum_probs=21.6
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhccc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLRQE 26 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~~~ 26 (79)
+.++||+|+|||||++++++.....
T Consensus 514 vLL~GppGtGKT~Lakala~~~~~~ 538 (806)
T 1ypw_A 514 VLFYGPPGCGKTLLAKAIANECQAN 538 (806)
T ss_dssp CCCBCCTTSSHHHHHHHHHHHHTCC
T ss_pred eEEECCCCCCHHHHHHHHHHHhCCC
Confidence 4688999999999999999987543
No 454
>1um8_A ATP-dependent CLP protease ATP-binding subunit CL; CLPP binding loop, chaperone; HET: ADP; 2.60A {Helicobacter pylori} SCOP: c.37.1.20
Probab=98.07 E-value=3.1e-06 Score=47.60 Aligned_cols=22 Identities=32% Similarity=0.330 Sum_probs=19.8
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
+-++||+|+||||+++.+....
T Consensus 75 ill~Gp~GtGKT~la~~la~~l 96 (376)
T 1um8_A 75 ILLIGPTGSGKTLMAQTLAKHL 96 (376)
T ss_dssp EEEECCTTSSHHHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHHHh
Confidence 4588999999999999998876
No 455
>2bjv_A PSP operon transcriptional activator; AAA, transcription activation, gene regulation, sigma54 activator, enhancer binding protein, PSPF; 1.7A {Escherichia coli} PDB: 2bjw_A 2c96_A* 2c98_A* 2c99_A* 2c9c_A* 2vii_A*
Probab=98.06 E-value=3.2e-06 Score=45.39 Aligned_cols=23 Identities=17% Similarity=0.059 Sum_probs=19.9
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
+-|+|++|+|||++++.+.....
T Consensus 32 vll~G~~GtGKt~la~~i~~~~~ 54 (265)
T 2bjv_A 32 VLIIGERGTGKELIASRLHYLSS 54 (265)
T ss_dssp EEEECCTTSCHHHHHHHHHHTST
T ss_pred EEEECCCCCcHHHHHHHHHHhcC
Confidence 45899999999999999987653
No 456
>1ko7_A HPR kinase/phosphatase; protein kinase, phosphotransfer, protein phosphatase, dual activity, product, substrate, transferase, hydrolase; 1.95A {Staphylococcus xylosus} SCOP: c.98.2.1 c.91.1.2
Probab=98.06 E-value=2.9e-06 Score=47.12 Aligned_cols=20 Identities=25% Similarity=0.072 Sum_probs=18.0
Q ss_pred eeEEcCCCCcHHHHHHHHHh
Q 044571 2 EGLYGISCVGKTTLANFVGN 21 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g 21 (79)
+.|+|+||+||||++..+..
T Consensus 147 vl~~G~sG~GKSt~a~~l~~ 166 (314)
T 1ko7_A 147 VLITGDSGIGKSETALELIK 166 (314)
T ss_dssp EEEEESTTSSHHHHHHHHHH
T ss_pred EEEEeCCCCCHHHHHHHHHh
Confidence 57899999999999998876
No 457
>2qgz_A Helicase loader, putative primosome component; structural genomics, PSI-2, protein structure initiative; 2.40A {Streptococcus pyogenes serotype M3}
Probab=98.06 E-value=3.4e-06 Score=46.58 Aligned_cols=23 Identities=30% Similarity=0.377 Sum_probs=19.9
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
+.|+||+|+|||+|++++.....
T Consensus 155 lll~G~~GtGKT~La~aia~~~~ 177 (308)
T 2qgz_A 155 LYLYGDMGIGKSYLLAAMAHELS 177 (308)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHH
Confidence 45889999999999999987655
No 458
>3uk6_A RUVB-like 2; hexameric AAA+ ATP-ASE, DNA unwinding, hydrolase; HET: ADP; 2.95A {Homo sapiens} PDB: 2xsz_D*
Probab=98.05 E-value=3.2e-06 Score=47.17 Aligned_cols=24 Identities=25% Similarity=0.189 Sum_probs=20.9
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhcc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLRQ 25 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~~ 25 (79)
+-|.||+|+|||++++.+......
T Consensus 73 vLl~GppGtGKT~la~~la~~l~~ 96 (368)
T 3uk6_A 73 VLIAGQPGTGKTAIAMGMAQALGP 96 (368)
T ss_dssp EEEEESTTSSHHHHHHHHHHHHCS
T ss_pred EEEECCCCCCHHHHHHHHHHHhcc
Confidence 458899999999999999988753
No 459
>3co5_A Putative two-component system transcriptional RES regulator; structural genomics, APC89341.1; 2.40A {Neisseria gonorrhoeae}
Probab=98.05 E-value=9e-07 Score=43.72 Aligned_cols=23 Identities=17% Similarity=-0.002 Sum_probs=19.4
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
+-|.|++|+|||++++.+.....
T Consensus 30 vll~G~~GtGKt~lA~~i~~~~~ 52 (143)
T 3co5_A 30 VFLTGEAGSPFETVARYFHKNGT 52 (143)
T ss_dssp EEEEEETTCCHHHHHGGGCCTTS
T ss_pred EEEECCCCccHHHHHHHHHHhCC
Confidence 45889999999999999976543
No 460
>2v3c_C SRP54, signal recognition 54 kDa protein; nucleotide-binding, signal recognition particle, GTP-binding, RNA-binding; 2.50A {Methanocaldococcus jannaschii} PDB: 3ndb_B
Probab=98.05 E-value=2e-06 Score=49.55 Aligned_cols=24 Identities=33% Similarity=0.317 Sum_probs=21.2
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
+++++|++|+||||++..+.+...
T Consensus 101 vI~ivG~~GvGKTTla~~La~~l~ 124 (432)
T 2v3c_C 101 VILLVGIQGSGKTTTAAKLARYIQ 124 (432)
T ss_dssp CEEEECCSSSSTTHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHH
Confidence 478999999999999999988764
No 461
>1wxq_A GTP-binding protein; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 2.60A {Pyrococcus horikoshii} SCOP: c.37.1.8 d.15.10.2
Probab=98.04 E-value=2.7e-06 Score=48.50 Aligned_cols=22 Identities=27% Similarity=0.209 Sum_probs=19.1
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|.+++|||||++.+.+..
T Consensus 3 I~ivG~pnvGKSTL~n~L~~~~ 24 (397)
T 1wxq_A 3 IGVVGKPNVGKSTFFSAATLVD 24 (397)
T ss_dssp EEEEECTTSSHHHHHHHHHC--
T ss_pred EEEECCCCCCHHHHHHHHHCCC
Confidence 7899999999999999998864
No 462
>2zr9_A Protein RECA, recombinase A; recombination, RECA mutants, DNA-repair, ATP-binding, DNA DA recombination, DNA repair, DNA-binding; HET: DTP; 2.50A {Mycobacterium smegmatis str} PDB: 2zr0_A* 2zra_A* 2zrb_A 2zrm_A* 1ubc_A* 1ubf_A* 1ubg_A* 1ube_A* 2g88_A* 2odw_A* 2oe2_A 2oep_A* 2oes_A 2ofo_A 2zr7_A 2odn_A* 2zrn_A 2zro_A* 2zrp_A* 2zre_A* ...
Probab=98.04 E-value=2.7e-06 Score=47.77 Aligned_cols=22 Identities=32% Similarity=0.339 Sum_probs=18.7
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
+.|.|++|+|||||+..+....
T Consensus 64 v~I~G~pGsGKTtLal~la~~~ 85 (349)
T 2zr9_A 64 IEIYGPESSGKTTVALHAVANA 85 (349)
T ss_dssp EEEEESTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHH
Confidence 6789999999999988887554
No 463
>3tmk_A Thymidylate kinase; phosphotransferase; HET: T5A; 2.00A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 2tmk_A* 1tmk_A*
Probab=98.03 E-value=3.2e-06 Score=44.68 Aligned_cols=25 Identities=28% Similarity=0.367 Sum_probs=21.5
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQ 25 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~ 25 (79)
++.+.|+.||||||+++.+...+..
T Consensus 7 ~i~~eG~~g~GKst~~~~l~~~l~~ 31 (216)
T 3tmk_A 7 LILIEGLDRTGKTTQCNILYKKLQP 31 (216)
T ss_dssp EEEEEECSSSSHHHHHHHHHHHHCS
T ss_pred EEEEECCCCCCHHHHHHHHHHHhcc
Confidence 3678899999999999999887654
No 464
>4b4t_K 26S protease regulatory subunit 6B homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.03 E-value=4e-06 Score=48.29 Aligned_cols=24 Identities=38% Similarity=0.436 Sum_probs=20.5
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhcc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLRQ 25 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~~ 25 (79)
+-+.||.|+|||++++++++....
T Consensus 209 iLL~GPPGtGKT~lakAiA~~~~~ 232 (428)
T 4b4t_K 209 VLLYGPPGTGKTMLVKAVANSTKA 232 (428)
T ss_dssp EEEESCTTTTHHHHHHHHHHHHTC
T ss_pred EEEECCCCCCHHHHHHHHHHHhCC
Confidence 357899999999999999987643
No 465
>3llm_A ATP-dependent RNA helicase A; alpha-beta-alpha, structural genomics, structural genomics consortium, SGC, activator, ATP-binding, DNA-binding; HET: ADP; 2.80A {Homo sapiens}
Probab=98.02 E-value=4e-06 Score=44.42 Aligned_cols=20 Identities=25% Similarity=0.041 Sum_probs=16.5
Q ss_pred eeEEcCCCCcHHHHHHHHHh
Q 044571 2 EGLYGISCVGKTTLANFVGN 21 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g 21 (79)
+.+.|++||||||++..+.-
T Consensus 79 ~~i~g~TGsGKTt~~~~~~~ 98 (235)
T 3llm_A 79 VIIRGATGCGKTTQVPQFIL 98 (235)
T ss_dssp EEEECCTTSSHHHHHHHHHH
T ss_pred EEEEeCCCCCcHHhHHHHHh
Confidence 57899999999998776643
No 466
>1puj_A YLQF, conserved hypothetical protein YLQF; structural genomics, nysgxrc T18, GTPase, PSI, protein structure initiative; HET: GNP; 2.00A {Bacillus subtilis} SCOP: c.37.1.8
Probab=98.02 E-value=3.7e-06 Score=45.97 Aligned_cols=22 Identities=36% Similarity=0.448 Sum_probs=20.2
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++++|.+|+|||||++.+.+..
T Consensus 123 v~~vG~~nvGKSsliN~l~~~~ 144 (282)
T 1puj_A 123 ALIIGIPNVGKSTLINRLAKKN 144 (282)
T ss_dssp EEEEESTTSSHHHHHHHHHTSC
T ss_pred EEEEecCCCchHHHHHHHhcCc
Confidence 6899999999999999999865
No 467
>1g8f_A Sulfate adenylyltransferase; alpha-beta protein, beta-barrel, rossmann-fold, kinase fold; 1.95A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1g8g_A* 1g8h_A* 1j70_A 1jec_A 1jed_A* 1jee_A*
Probab=98.01 E-value=2.9e-06 Score=49.85 Aligned_cols=24 Identities=17% Similarity=-0.036 Sum_probs=21.0
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhcc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLRQ 25 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~~ 25 (79)
+.++|.+||||||+.+.|...+..
T Consensus 398 I~l~GlsGsGKSTIa~~La~~L~~ 421 (511)
T 1g8f_A 398 IVLGNSLTVSREQLSIALLSTFLQ 421 (511)
T ss_dssp EEECTTCCSCHHHHHHHHHHHHTT
T ss_pred EEecccCCCCHHHHHHHHHHHHHH
Confidence 578899999999999999887653
No 468
>1hqc_A RUVB; extended AAA-ATPase domain, complex with nucleotide, hydrolase; HET: ADE; 3.20A {Thermus thermophilus} SCOP: a.4.5.11 c.37.1.20 PDB: 1ixs_B* 1ixr_C*
Probab=98.01 E-value=2.6e-06 Score=46.79 Aligned_cols=23 Identities=39% Similarity=0.553 Sum_probs=19.8
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
+.|.||+|+||||+++.+.....
T Consensus 41 vll~G~~GtGKT~la~~i~~~~~ 63 (324)
T 1hqc_A 41 LLLFGPPGLGKTTLAHVIAHELG 63 (324)
T ss_dssp CEEECCTTCCCHHHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHHHhC
Confidence 46899999999999999987653
No 469
>3r7w_A Gtpase1, GTP-binding protein GTR1; RAG gtpases, GTR1P, GTR2P, MTOR, protein transport; HET: GNP; 2.77A {Saccharomyces cerevisiae} PDB: 4arz_A*
Probab=98.01 E-value=4.1e-06 Score=46.16 Aligned_cols=21 Identities=24% Similarity=0.262 Sum_probs=19.0
Q ss_pred eeEEcCCCCcHHHHHHHHHhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQ 22 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~ 22 (79)
++++|.+|+|||||++.+.+.
T Consensus 6 I~lvG~~~vGKSSLi~~l~~~ 26 (307)
T 3r7w_A 6 LLLMGRSGSGKSSMRSIIFSN 26 (307)
T ss_dssp EEEECCTTSSHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHHhC
Confidence 689999999999999998765
No 470
>4i1u_A Dephospho-COA kinase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.05A {Burkholderia vietnamiensis} PDB: 4i1v_A*
Probab=98.01 E-value=4.3e-06 Score=44.06 Aligned_cols=20 Identities=40% Similarity=0.448 Sum_probs=18.5
Q ss_pred eeEEcCCCCcHHHHHHHHHh
Q 044571 2 EGLYGISCVGKTTLANFVGN 21 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g 21 (79)
+||+|.-||||||+.+.+..
T Consensus 12 iglTGgigsGKStv~~~l~~ 31 (210)
T 4i1u_A 12 IGLTGGIGSGKTTVADLFAA 31 (210)
T ss_dssp EEEECCTTSCHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHH
Confidence 78999999999999999875
No 471
>3gj0_A GTP-binding nuclear protein RAN; G protein, GDP, acetylation, cytoplasm, HOST- virus interaction, nucleotide-binding, nucleus, phosphoprotein; HET: GDP; 1.48A {Homo sapiens} SCOP: c.37.1.8 PDB: 3gj3_A* 3gj5_A* 3gj4_A* 3gj6_A* 3gj7_A* 3gj8_A* 1i2m_A 1a2k_C 1ibr_A* 1k5d_A* 1k5g_A* 1qbk_C* 3a6p_C* 3ch5_A* 4gmx_A* 4gpt_A* 4hat_A* 4hau_A* 4hav_A* 4haw_A* ...
Probab=98.00 E-value=2.6e-06 Score=44.48 Aligned_cols=22 Identities=27% Similarity=0.264 Sum_probs=18.7
Q ss_pred eeEEcCCCCcHHHHHHH-HHhhh
Q 044571 2 EGLYGISCVGKTTLANF-VGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~-i~g~~ 23 (79)
++|+|.+|+|||||++. +.+..
T Consensus 18 i~v~G~~~~GKSsli~~~~~~~~ 40 (221)
T 3gj0_A 18 LVLVGDGGTGKTTFVKRHLTGEF 40 (221)
T ss_dssp EEEEECTTSSHHHHHTTBHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHcCCC
Confidence 68999999999999998 55553
No 472
>4b4t_M 26S protease regulatory subunit 6A; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.00 E-value=4.6e-06 Score=48.12 Aligned_cols=24 Identities=33% Similarity=0.358 Sum_probs=20.5
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhcc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLRQ 25 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~~ 25 (79)
+-+.||.|||||++++++++....
T Consensus 218 vLLyGPPGTGKTllAkAiA~e~~~ 241 (434)
T 4b4t_M 218 ALMYGPPGTGKTLLARACAAQTNA 241 (434)
T ss_dssp EEEESCTTSSHHHHHHHHHHHHTC
T ss_pred eEEECcCCCCHHHHHHHHHHHhCC
Confidence 347899999999999999997654
No 473
>4b4t_L 26S protease subunit RPT4; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.00 E-value=4.7e-06 Score=48.14 Aligned_cols=24 Identities=38% Similarity=0.404 Sum_probs=20.5
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhcc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLRQ 25 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~~ 25 (79)
+-+.||.|||||+|++++++....
T Consensus 218 vLL~GPPGtGKTllAkAiA~e~~~ 241 (437)
T 4b4t_L 218 VLLYGPPGTGKTLLAKAVAATIGA 241 (437)
T ss_dssp EEEESCTTSSHHHHHHHHHHHHTC
T ss_pred EEEECCCCCcHHHHHHHHHHHhCC
Confidence 347899999999999999987644
No 474
>2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A
Probab=97.99 E-value=4.9e-06 Score=47.98 Aligned_cols=22 Identities=32% Similarity=0.359 Sum_probs=19.7
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
+-|.||+|+|||++++++....
T Consensus 170 vLL~GppGtGKT~lA~aia~~~ 191 (444)
T 2zan_A 170 ILLFGPPGTGKSYLAKAVATEA 191 (444)
T ss_dssp EEEECSTTSSHHHHHHHHHHHC
T ss_pred EEEECCCCCCHHHHHHHHHHHc
Confidence 4578999999999999999876
No 475
>1m8p_A Sulfate adenylyltransferase; rossmann fold, phosphosulfate binding, T-state; HET: PPS; 2.60A {Penicillium chrysogenum} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1i2d_A*
Probab=97.99 E-value=4.1e-06 Score=49.79 Aligned_cols=23 Identities=26% Similarity=0.182 Sum_probs=20.1
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
+.|+|.+||||||+++.|...+.
T Consensus 399 I~l~GlsGSGKSTiA~~La~~L~ 421 (573)
T 1m8p_A 399 IFLTGYMNSGKDAIARALQVTLN 421 (573)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHH
T ss_pred EEeecCCCCCHHHHHHHHHHHhc
Confidence 67899999999999999977654
No 476
>2hjg_A GTP-binding protein ENGA; GTPase ENGA KH-domain, hydrolase; HET: GDP; 2.50A {Bacillus subtilis}
Probab=97.99 E-value=3.1e-06 Score=48.64 Aligned_cols=22 Identities=27% Similarity=0.379 Sum_probs=20.1
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|.+|+|||||++.+.+..
T Consensus 6 V~ivG~~nvGKStL~n~l~~~~ 27 (436)
T 2hjg_A 6 VAIVGRPNVGKSTIFNRIAGER 27 (436)
T ss_dssp EEEECSTTSSHHHHHHHHEEEE
T ss_pred EEEECCCCCCHHHHHHHHhCCC
Confidence 7899999999999999998853
No 477
>2qen_A Walker-type ATPase; unknown function; HET: ADP; 2.25A {Pyrococcus abyssi}
Probab=97.98 E-value=4.2e-06 Score=46.13 Aligned_cols=21 Identities=38% Similarity=0.412 Sum_probs=18.8
Q ss_pred eeEEcCCCCcHHHHHHHHHhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQ 22 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~ 22 (79)
+.|.|+.|+|||||++.+...
T Consensus 34 v~i~G~~G~GKT~Ll~~~~~~ 54 (350)
T 2qen_A 34 TLLLGIRRVGKSSLLRAFLNE 54 (350)
T ss_dssp EEEECCTTSSHHHHHHHHHHH
T ss_pred EEEECCCcCCHHHHHHHHHHH
Confidence 578999999999999998765
No 478
>3fdi_A Uncharacterized protein; cytidylate kinase like protein, PSI, MCSG, PRK04182 class ME structural genomics, protein structure initiative; 2.20A {Eubacterium ventriosum}
Probab=97.98 E-value=4.5e-06 Score=43.51 Aligned_cols=24 Identities=8% Similarity=0.001 Sum_probs=20.9
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
+++|.|+.||||||+.+.+...+.
T Consensus 8 iI~i~g~~GsGk~ti~~~la~~lg 31 (201)
T 3fdi_A 8 IIAIGREFGSGGHLVAKKLAEHYN 31 (201)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHTT
T ss_pred EEEEeCCCCCCHHHHHHHHHHHhC
Confidence 478999999999999999987654
No 479
>1g41_A Heat shock protein HSLU; AAA-ATPase, CLPY, ATP-dependent proteolysis, chaperone; HET: ADP; 2.30A {Haemophilus influenzae} SCOP: c.37.1.20 PDB: 1g3i_A* 1im2_A* 1kyi_A* 1g4a_E* 1g4b_E 1yyf_A* 1do0_A* 1do2_A* 1e94_E* 1hqy_E* 1ht1_E* 1ht2_E*
Probab=97.98 E-value=6.1e-06 Score=47.75 Aligned_cols=25 Identities=24% Similarity=0.219 Sum_probs=21.5
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhccc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLRQE 26 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~~~ 26 (79)
+.++||+|+||||+++.+.......
T Consensus 53 iLl~GppGtGKT~lar~lA~~l~~~ 77 (444)
T 1g41_A 53 ILMIGPTGVGKTEIARRLAKLANAP 77 (444)
T ss_dssp EEEECCTTSSHHHHHHHHHHHTTCC
T ss_pred EEEEcCCCCCHHHHHHHHHHHcCCC
Confidence 4578999999999999999887543
No 480
>2fna_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE ADP; 2.00A {Sulfolobus solfataricus} SCOP: a.4.5.11 c.37.1.20
Probab=97.97 E-value=4.3e-06 Score=46.14 Aligned_cols=22 Identities=23% Similarity=0.344 Sum_probs=19.5
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
+.|.|+.|+|||||++.+....
T Consensus 33 v~i~G~~G~GKT~L~~~~~~~~ 54 (357)
T 2fna_A 33 TLVLGLRRTGKSSIIKIGINEL 54 (357)
T ss_dssp EEEEESTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHhc
Confidence 6789999999999999988764
No 481
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=97.97 E-value=4.5e-06 Score=48.27 Aligned_cols=25 Identities=24% Similarity=0.278 Sum_probs=21.0
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhcc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLRQ 25 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~~ 25 (79)
++.++|++|+||||++..+...+..
T Consensus 102 vIlivG~~G~GKTTt~~kLA~~l~~ 126 (443)
T 3dm5_A 102 ILLMVGIQGSGKTTTVAKLARYFQK 126 (443)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHT
T ss_pred EEEEECcCCCCHHHHHHHHHHHHHH
Confidence 3678999999999999998876653
No 482
>1zcb_A G alpha I/13; GTP-binding, lipoprotein, membrane, transducer, signaling PR; HET: GDP; 2.00A {Mus musculus} SCOP: a.66.1.1 c.37.1.8 PDB: 3ab3_A* 3cx8_A* 3cx7_A* 3cx6_A* 1zca_A*
Probab=97.96 E-value=5.2e-06 Score=46.88 Aligned_cols=21 Identities=24% Similarity=0.126 Sum_probs=17.7
Q ss_pred eeEEcCCCCcHHHHHHHHHhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQ 22 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~ 22 (79)
+.|+|.+||||||++|.+--.
T Consensus 36 illlG~~~SGKST~~kq~~i~ 56 (362)
T 1zcb_A 36 ILLLGAGESGKSTFLKQMRII 56 (362)
T ss_dssp EEEECSTTSSHHHHHHHHHHH
T ss_pred EEEECCCCCcHHHHHHHHHHH
Confidence 568999999999999998433
No 483
>3geh_A MNME, tRNA modification GTPase MNME; G protein, U34, GTP-binding, HYDR magnesium, metal-binding, nucleotide-binding, potassium, TR processing; HET: GDP FON; 3.20A {Nostoc SP}
Probab=97.96 E-value=5.2e-06 Score=48.22 Aligned_cols=22 Identities=27% Similarity=0.279 Sum_probs=20.2
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|++|+|||||++.+.+..
T Consensus 227 V~ivG~~nvGKSSLln~L~~~~ 248 (462)
T 3geh_A 227 VAIVGRPNVGKSSLLNAWSQSD 248 (462)
T ss_dssp EEEEECTTSSHHHHHHHHHHHH
T ss_pred EEEEcCCCCCHHHHHHHHhCCC
Confidence 6899999999999999998864
No 484
>4b4t_J 26S protease regulatory subunit 8 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.96 E-value=6.1e-06 Score=47.26 Aligned_cols=23 Identities=39% Similarity=0.398 Sum_probs=20.1
Q ss_pred eEEcCCCCcHHHHHHHHHhhhcc
Q 044571 3 GLYGISCVGKTTLANFVGNQLRQ 25 (79)
Q Consensus 3 ~i~G~~G~GKstl~~~i~g~~~~ 25 (79)
-+.||.|+|||+|++++++....
T Consensus 186 LL~GPPGTGKTllAkAiA~e~~~ 208 (405)
T 4b4t_J 186 ILYGPPGTGKTLLARAVAHHTDC 208 (405)
T ss_dssp EEESCSSSSHHHHHHHHHHHHTC
T ss_pred EEeCCCCCCHHHHHHHHHHhhCC
Confidence 47899999999999999987654
No 485
>1x6v_B Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthethase 1; transferase, ATP sulfurylase, APS kinase, PAPS; HET: ADP; 1.75A {Homo sapiens} SCOP: b.122.1.3 c.26.1.5 c.37.1.4 PDB: 1xjq_B* 1xnj_B* 2qjf_A* 2ofx_A* 2ofw_A*
Probab=97.96 E-value=5e-06 Score=49.94 Aligned_cols=22 Identities=36% Similarity=0.354 Sum_probs=19.8
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
+.|+|.+||||||+++.|...+
T Consensus 55 IvLtGlsGSGKSTlAr~La~~L 76 (630)
T 1x6v_B 55 VWLTGLSGAGKTTVSMALEEYL 76 (630)
T ss_dssp EEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEEeCCCCCHHHHHHHHHHHH
Confidence 6789999999999999998765
No 486
>4hlc_A DTMP kinase, thymidylate kinase; TMK, MRSA, pipiridine, transfera transferase inhibitor complex; HET: T05; 1.55A {Staphylococcus aureus subsp} PDB: 2cck_A 4gfd_A* 4gsy_A* 4hdc_A* 4hej_A* 2ccj_A* 4hld_A* 2ccg_A*
Probab=97.95 E-value=6.1e-06 Score=43.20 Aligned_cols=24 Identities=33% Similarity=0.253 Sum_probs=20.7
Q ss_pred CeeEEcCCCCcHHHHHHHHHhhhc
Q 044571 1 MEGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
+|+|-|+-||||||+++.|...+.
T Consensus 4 FI~~EG~dGsGKsTq~~~L~~~L~ 27 (205)
T 4hlc_A 4 FITFEGPEGSGKTTVINEVYHRLV 27 (205)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHT
T ss_pred EEEEECCCCCcHHHHHHHHHHHHH
Confidence 467889999999999999987664
No 487
>1sxj_A Activator 1 95 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=97.95 E-value=6.9e-06 Score=48.13 Aligned_cols=22 Identities=45% Similarity=0.656 Sum_probs=19.4
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
+-|.||+|+||||+++.+....
T Consensus 80 lLL~GppGtGKTtla~~la~~l 101 (516)
T 1sxj_A 80 AMLYGPPGIGKTTAAHLVAQEL 101 (516)
T ss_dssp EEEECSTTSSHHHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHHHc
Confidence 4578999999999999998765
No 488
>3th5_A RAS-related C3 botulinum toxin substrate 1; rossmann fold, GTPase, GTP binding, protein binding, signali protein; HET: GNP; 2.30A {Homo sapiens}
Probab=97.18 E-value=1.2e-06 Score=45.28 Aligned_cols=21 Identities=29% Similarity=0.153 Sum_probs=18.2
Q ss_pred eeEEcCCCCcHHHHHHHHHhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQ 22 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~ 22 (79)
++++|.+|+|||||++.+.+.
T Consensus 33 i~v~G~~~~GKSsli~~l~~~ 53 (204)
T 3th5_A 33 CVVVGDGAVGKTCLLISYTTN 53 (204)
Confidence 678999999999999887653
No 489
>2x2e_A Dynamin-1; nitration, hydrolase, membrane fission, nucleotide-binding, endocytosis, motor protein; HET: GDP; 2.00A {Homo sapiens} PDB: 2x2f_A* 3zyc_A* 3zys_A
Probab=97.94 E-value=2.9e-06 Score=47.53 Aligned_cols=22 Identities=14% Similarity=0.107 Sum_probs=20.2
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|..++|||||++.+.|..
T Consensus 34 I~vvG~~~~GKSSLln~L~g~~ 55 (353)
T 2x2e_A 34 IAVVGGQSAGKSSVLENFVGRD 55 (353)
T ss_dssp EEEECBTTSSHHHHHHTTTTSC
T ss_pred EEEECCCCCCHHHHHHHHhCCC
Confidence 6899999999999999999864
No 490
>3ec1_A YQEH GTPase; atnos1, atnoa1, trap, PVHL, hydrolase, signaling protein; HET: GDP; 2.36A {Geobacillus stearothermophilus}
Probab=97.93 E-value=7.2e-06 Score=46.34 Aligned_cols=21 Identities=29% Similarity=0.322 Sum_probs=19.9
Q ss_pred eeEEcCCCCcHHHHHHHHHhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQ 22 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~ 22 (79)
++++|.+|+|||||++.|.+.
T Consensus 165 i~~vG~~nvGKStliN~L~~~ 185 (369)
T 3ec1_A 165 VYVVGCTNVGKSTFINRIIEE 185 (369)
T ss_dssp EEEECCTTSSHHHHHHHHHHH
T ss_pred EEEEcCCCCchHHHHHHHHhh
Confidence 689999999999999999987
No 491
>1c9k_A COBU, adenosylcobinamide kinase; alpha/beta structure rossmann fold P-loop, transferase; HET: 5GP; 2.20A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1cbu_A
Probab=97.93 E-value=7.8e-06 Score=42.12 Aligned_cols=22 Identities=23% Similarity=0.092 Sum_probs=18.7
Q ss_pred CeeEEcCCCCcHHHHHHHHHhh
Q 044571 1 MEGLYGISCVGKTTLANFVGNQ 22 (79)
Q Consensus 1 ~~~i~G~~G~GKstl~~~i~g~ 22 (79)
++-|+|++||||||++..+...
T Consensus 1 ~ilV~Gg~~SGKS~~A~~la~~ 22 (180)
T 1c9k_A 1 MILVTGGARSGKSRHAEALIGD 22 (180)
T ss_dssp CEEEEECTTSSHHHHHHHHHCS
T ss_pred CEEEECCCCCcHHHHHHHHHhc
Confidence 4678999999999999988743
No 492
>2r44_A Uncharacterized protein; putative ATPase, structural genomics, joint center for struc genomics, JCSG; HET: MSE PG4; 2.00A {Cytophaga hutchinsonii atcc 33406}
Probab=97.93 E-value=5.4e-06 Score=45.82 Aligned_cols=23 Identities=22% Similarity=0.208 Sum_probs=19.8
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
+-++||+|+|||++++.+.....
T Consensus 49 vll~G~pGtGKT~la~~la~~~~ 71 (331)
T 2r44_A 49 ILLEGVPGLAKTLSVNTLAKTMD 71 (331)
T ss_dssp EEEESCCCHHHHHHHHHHHHHTT
T ss_pred EEEECCCCCcHHHHHHHHHHHhC
Confidence 45889999999999999988653
No 493
>3pxg_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 3.65A {Bacillus subtilis}
Probab=97.93 E-value=5.7e-06 Score=47.99 Aligned_cols=22 Identities=36% Similarity=0.418 Sum_probs=19.6
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
+-|+||+|+||||+++.+...+
T Consensus 204 ~LL~G~pG~GKT~la~~la~~l 225 (468)
T 3pxg_A 204 PVLIGEPGVGKTAIAEGLAQQI 225 (468)
T ss_dssp EEEESCTTTTTHHHHHHHHHHH
T ss_pred eEEECCCCCCHHHHHHHHHHHH
Confidence 3588999999999999998876
No 494
>2r6a_A DNAB helicase, replicative helicase; replication, DNAB; 2.90A {Geobacillus stearothermophilus} PDB: 2r6c_A 2r6d_A 2r6e_A 2vyf_A 2vye_A
Probab=97.93 E-value=2e-05 Score=45.56 Aligned_cols=39 Identities=18% Similarity=0.157 Sum_probs=27.0
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhcccCCCCcEEEEEecCCccH
Q 044571 2 EGLYGISCVGKTTLANFVGNQLRQEKIFDEVGIATVSQDPDI 43 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~~~~~~~~~~~~~v~q~~~~ 43 (79)
+.|.|++|+|||||+..++....+.. +..+.|++-+.+.
T Consensus 206 iiI~G~pG~GKTtl~l~ia~~~~~~~---g~~Vl~~s~E~s~ 244 (454)
T 2r6a_A 206 IIVAARPSVGKTAFALNIAQNVATKT---NENVAIFSLEMSA 244 (454)
T ss_dssp EEEECCTTSCHHHHHHHHHHHHHHHS---SCCEEEEESSSCH
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHhC---CCcEEEEECCCCH
Confidence 67899999999999999988765431 2234455544433
No 495
>3vfd_A Spastin; ATPase, microtubule severing, hydrolase; 3.30A {Homo sapiens}
Probab=97.91 E-value=8.8e-06 Score=46.05 Aligned_cols=23 Identities=35% Similarity=0.323 Sum_probs=19.8
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
+-|.||+|+|||++++.+.....
T Consensus 151 vLL~GppGtGKT~la~aia~~~~ 173 (389)
T 3vfd_A 151 LLLFGPPGNGKTMLAKAVAAESN 173 (389)
T ss_dssp EEEESSTTSCHHHHHHHHHHHTT
T ss_pred EEEECCCCCCHHHHHHHHHHhhc
Confidence 45889999999999999987643
No 496
>1jr3_A DNA polymerase III subunit gamma; processivity, processivity clamp, clamp loader, AAA+ ATPase, transferase; HET: DNA; 2.70A {Escherichia coli} SCOP: a.80.1.1 c.37.1.20 PDB: 1xxh_B* 3glh_B* 3glf_B* 3gli_B* 3glg_B* 1xxi_B*
Probab=97.91 E-value=9e-06 Score=45.34 Aligned_cols=23 Identities=30% Similarity=0.405 Sum_probs=19.9
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
+.|.||.|+||||+++.+.....
T Consensus 41 ~ll~G~~G~GKT~la~~la~~l~ 63 (373)
T 1jr3_A 41 YLFSGTRGVGKTSIARLLAKGLN 63 (373)
T ss_dssp EEEESCTTSSHHHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHHHhC
Confidence 45889999999999999987664
No 497
>2qpt_A EH domain-containing protein-2; protein-nucleotide complex, membrane protein, endocytosis; HET: ANP; 3.10A {Mus musculus}
Probab=97.90 E-value=6.9e-06 Score=48.62 Aligned_cols=22 Identities=23% Similarity=0.232 Sum_probs=20.4
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
++|+|..|+|||||++.+.|..
T Consensus 68 V~vvG~~n~GKSTLIN~Llg~~ 89 (550)
T 2qpt_A 68 VLVAGQYSTGKTSFIQYLLEQE 89 (550)
T ss_dssp EEEEEBTTSCHHHHHHHHHTSC
T ss_pred EEEECCCCCCHHHHHHHHhCCc
Confidence 7899999999999999999864
No 498
>1yrb_A ATP(GTP)binding protein; GTPase, P-loop, rossman fold, GDP, HYDR; HET: GDP; 1.75A {Pyrococcus abyssi} SCOP: c.37.1.10 PDB: 1yr6_A* 1yr8_A* 1yr9_A* 1yra_A* 1yr7_A* 2oxr_A*
Probab=97.90 E-value=7.4e-06 Score=43.79 Aligned_cols=23 Identities=35% Similarity=0.369 Sum_probs=19.3
Q ss_pred eeEEcCCCCcHHHHHHHHHhhhc
Q 044571 2 EGLYGISCVGKTTLANFVGNQLR 24 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~~ 24 (79)
+.++|..|+||||++..+.....
T Consensus 17 ~~~~GkgGvGKTTl~~~La~~l~ 39 (262)
T 1yrb_A 17 VVFVGTAGSGKTTLTGEFGRYLE 39 (262)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHT
T ss_pred EEEeCCCCCCHHHHHHHHHHHHH
Confidence 56889999999999999985443
No 499
>2axn_A 6-phosphofructo-2-kinase/fructose-2,6- biphosphatase 3 (6PF-2-K/FRU- 2,6-P2ASE brain/placenta-type...; bifunctional enzyme, EDTA complex; HET: F6P EDT ADP; 2.10A {Homo sapiens} PDB: 2dwo_A* 2dwp_A* 2i1v_B* 3qpu_A* 3qpv_A* 3qpw_A*
Probab=97.90 E-value=7.4e-06 Score=48.20 Aligned_cols=22 Identities=23% Similarity=0.291 Sum_probs=19.2
Q ss_pred eeEEcCCCCcHHHHHHHHHhhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQL 23 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~~ 23 (79)
+.++|.+||||||+.+.|...+
T Consensus 38 IvlvGlpGSGKSTia~~La~~L 59 (520)
T 2axn_A 38 IVMVGLPARGKTYISKKLTRYL 59 (520)
T ss_dssp EEEECCTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHH
Confidence 6789999999999999997654
No 500
>3sjy_A Translation initiation factor 2 subunit gamma; zinc finger, initiate translation, tRNA binding, mRNA bindin binding; HET: GCP GDP; 2.00A {Sulfolobus solfataricus P2} PDB: 3pen_A* 3sjz_A* 2qn6_A* 2aho_A 2qmu_A* 2plf_A* 3v11_A* 3i1f_A* 3cw2_A 2pmd_A* 3p3m_A* 3qsy_A*
Probab=97.90 E-value=8.3e-06 Score=46.47 Aligned_cols=21 Identities=33% Similarity=0.328 Sum_probs=19.4
Q ss_pred eeEEcCCCCcHHHHHHHHHhh
Q 044571 2 EGLYGISCVGKTTLANFVGNQ 22 (79)
Q Consensus 2 ~~i~G~~G~GKstl~~~i~g~ 22 (79)
++++|..|+|||||++.+.+.
T Consensus 11 I~vvG~~~~GKSTLi~~L~~~ 31 (403)
T 3sjy_A 11 IGVVGHVDHGKTTLVQAITGI 31 (403)
T ss_dssp EEEECSTTSSHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHhCc
Confidence 689999999999999999883
Done!