Query 044572
Match_columns 457
No_of_seqs 308 out of 3102
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 07:37:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044572.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044572hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2jjq_A Uncharacterized RNA met 100.0 1.6E-56 5.6E-61 463.5 35.3 342 45-444 72-415 (425)
2 1uwv_A 23S rRNA (uracil-5-)-me 100.0 3.5E-49 1.2E-53 410.4 37.6 320 45-423 72-402 (433)
3 3bt7_A TRNA (uracil-5-)-methyl 100.0 1.9E-44 6.6E-49 367.4 31.3 331 59-444 3-357 (369)
4 2b78_A Hypothetical protein SM 100.0 9.2E-31 3.2E-35 267.8 19.8 318 92-452 14-382 (385)
5 2as0_A Hypothetical protein PH 100.0 2.7E-30 9.1E-35 265.3 22.3 320 94-452 16-389 (396)
6 3c0k_A UPF0064 protein YCCW; P 100.0 5.4E-30 1.9E-34 263.0 24.4 305 106-452 40-392 (396)
7 1wxx_A TT1595, hypothetical pr 100.0 2.9E-29 1E-33 256.4 18.6 313 92-452 13-378 (382)
8 3a27_A TYW2, uncharacterized p 99.9 5.9E-21 2E-25 186.1 16.2 168 230-413 53-222 (272)
9 2yx1_A Hypothetical protein MJ 99.8 5E-18 1.7E-22 170.2 20.8 187 212-426 117-306 (336)
10 2frn_A Hypothetical protein PH 99.8 1E-17 3.5E-22 163.6 19.2 161 232-404 62-225 (278)
11 4dmg_A Putative uncharacterize 99.7 7.5E-18 2.6E-22 172.3 14.3 186 251-452 164-379 (393)
12 2igt_A SAM dependent methyltra 99.7 1.1E-16 3.9E-21 160.1 16.4 173 252-432 99-296 (332)
13 3k6r_A Putative transferase PH 99.7 2.6E-16 8.9E-21 153.3 15.3 144 250-404 78-224 (278)
14 3axs_A Probable N(2),N(2)-dime 99.7 7.6E-17 2.6E-21 164.3 10.4 137 264-404 5-157 (392)
15 3p9n_A Possible methyltransfer 99.6 2.2E-15 7.7E-20 137.7 14.6 136 265-404 10-152 (189)
16 2dul_A N(2),N(2)-dimethylguano 99.6 1.2E-15 4.3E-20 155.0 12.3 139 263-404 6-163 (378)
17 1nv8_A HEMK protein; class I a 99.6 1.4E-14 4.8E-19 141.8 16.3 133 264-404 89-248 (284)
18 3v97_A Ribosomal RNA large sub 99.6 5.8E-15 2E-19 161.4 13.7 137 260-404 501-656 (703)
19 2fpo_A Methylase YHHF; structu 99.6 4.6E-15 1.6E-19 137.7 9.7 132 267-404 23-159 (202)
20 2yxd_A Probable cobalt-precorr 99.5 1.1E-13 3.9E-18 124.3 13.4 144 269-428 2-149 (183)
21 2ift_A Putative methylase HI07 99.5 3E-14 1E-18 132.0 9.3 134 266-404 21-162 (201)
22 2h00_A Methyltransferase 10 do 99.5 8.3E-14 2.8E-18 133.3 11.7 116 266-383 27-153 (254)
23 2b3t_A Protein methyltransfera 99.5 2.5E-13 8.7E-18 131.8 15.2 112 265-383 77-189 (276)
24 1wy7_A Hypothetical protein PH 99.5 1.1E-12 3.6E-17 121.3 17.9 117 276-404 26-147 (207)
25 1ws6_A Methyltransferase; stru 99.5 6.1E-14 2.1E-18 125.0 9.0 132 266-404 10-146 (171)
26 3dmg_A Probable ribosomal RNA 99.5 5E-13 1.7E-17 136.0 16.2 145 266-422 196-352 (381)
27 1ne2_A Hypothetical protein TA 99.5 1.1E-12 3.6E-17 120.8 15.2 130 276-427 28-162 (200)
28 2esr_A Methyltransferase; stru 99.4 1.2E-13 4.2E-18 124.4 8.0 104 298-404 31-137 (177)
29 3evz_A Methyltransferase; NYSG 99.4 8.3E-13 2.8E-17 124.0 13.9 107 266-381 27-134 (230)
30 4dcm_A Ribosomal RNA large sub 99.4 6.6E-13 2.2E-17 134.9 13.3 146 266-421 191-345 (375)
31 1fbn_A MJ fibrillarin homologu 99.4 1.3E-12 4.3E-17 123.4 14.2 103 297-404 73-177 (230)
32 2nxc_A L11 mtase, ribosomal pr 99.4 5.5E-13 1.9E-17 128.2 11.7 149 265-427 86-235 (254)
33 1dus_A MJ0882; hypothetical pr 99.4 3.7E-12 1.3E-16 115.4 16.5 151 262-426 15-173 (194)
34 3njr_A Precorrin-6Y methylase; 99.4 2.3E-12 7.7E-17 119.7 15.3 118 297-427 54-171 (204)
35 3grz_A L11 mtase, ribosomal pr 99.4 1.5E-12 5.1E-17 120.2 13.1 149 266-427 27-176 (205)
36 3e05_A Precorrin-6Y C5,15-meth 99.4 5.2E-12 1.8E-16 116.5 16.0 121 297-427 39-159 (204)
37 2fhp_A Methylase, putative; al 99.4 3.2E-13 1.1E-17 122.3 7.6 135 266-404 12-153 (187)
38 4dzr_A Protein-(glutamine-N5) 99.4 2.2E-13 7.4E-18 125.7 5.6 106 270-381 1-112 (215)
39 3lpm_A Putative methyltransfer 99.4 4.3E-12 1.5E-16 122.0 14.8 121 298-427 49-192 (259)
40 1yzh_A TRNA (guanine-N(7)-)-me 99.4 9.7E-12 3.3E-16 115.8 15.5 123 297-427 40-173 (214)
41 3ll7_A Putative methyltransfer 99.4 4.7E-13 1.6E-17 136.7 6.2 105 272-382 69-175 (410)
42 3mti_A RRNA methylase; SAM-dep 99.3 7.6E-12 2.6E-16 113.4 13.2 85 291-380 15-99 (185)
43 2ozv_A Hypothetical protein AT 99.3 3.9E-12 1.3E-16 122.6 10.8 120 298-425 36-184 (260)
44 3tm4_A TRNA (guanine N2-)-meth 99.3 7.1E-12 2.4E-16 127.2 13.2 125 281-417 203-337 (373)
45 2ipx_A RRNA 2'-O-methyltransfe 99.3 1.2E-11 4.2E-16 116.6 13.8 102 297-404 76-181 (233)
46 3lec_A NADB-rossmann superfami 99.3 1.5E-11 5.1E-16 116.2 14.0 96 290-392 13-108 (230)
47 2b9e_A NOL1/NOP2/SUN domain fa 99.3 1.6E-11 5.4E-16 121.4 14.8 84 297-383 101-187 (309)
48 3gdh_A Trimethylguanosine synt 99.3 1.6E-12 5.6E-17 123.0 7.4 106 272-384 52-158 (241)
49 3kr9_A SAM-dependent methyltra 99.3 1.7E-11 5.9E-16 115.5 14.2 96 290-392 7-102 (225)
50 3gnl_A Uncharacterized protein 99.3 1.5E-11 5E-16 117.2 13.8 122 290-422 13-138 (244)
51 3m4x_A NOL1/NOP2/SUN family pr 99.3 3.5E-12 1.2E-16 132.3 9.6 85 297-384 104-189 (456)
52 3eey_A Putative rRNA methylase 99.3 2.1E-11 7.3E-16 111.5 13.5 84 295-380 19-103 (197)
53 3tma_A Methyltransferase; thum 99.3 2.2E-11 7.6E-16 122.5 14.8 104 297-404 202-317 (354)
54 3ajd_A Putative methyltransfer 99.3 5.9E-12 2E-16 122.3 9.5 105 297-404 82-211 (274)
55 1ixk_A Methyltransferase; open 99.3 1.9E-11 6.7E-16 121.1 12.6 83 297-383 117-200 (315)
56 3hm2_A Precorrin-6Y C5,15-meth 99.3 8.1E-11 2.8E-15 105.4 15.2 103 297-404 24-126 (178)
57 1g8a_A Fibrillarin-like PRE-rR 99.3 8.9E-11 3E-15 110.0 16.0 103 297-404 72-177 (227)
58 3dxy_A TRNA (guanine-N(7)-)-me 99.3 1.4E-11 4.9E-16 115.6 10.5 120 298-425 34-165 (218)
59 3m6w_A RRNA methylase; rRNA me 99.3 1E-11 3.5E-16 129.1 9.9 104 297-404 100-229 (464)
60 3q87_B N6 adenine specific DNA 99.3 6.3E-11 2.2E-15 106.5 13.9 123 282-427 7-140 (170)
61 3u81_A Catechol O-methyltransf 99.3 5.3E-11 1.8E-15 111.4 13.9 122 278-404 40-169 (221)
62 2frx_A Hypothetical protein YE 99.3 1.7E-11 5.9E-16 128.2 11.6 83 298-383 117-200 (479)
63 1yb2_A Hypothetical protein TA 99.3 1.3E-11 4.4E-16 119.7 9.9 140 275-426 81-227 (275)
64 2r6z_A UPF0341 protein in RSP 99.2 3.8E-12 1.3E-16 122.7 5.5 82 297-382 82-173 (258)
65 1dl5_A Protein-L-isoaspartate 99.2 2.9E-11 1E-15 119.8 11.9 124 271-404 48-174 (317)
66 1o9g_A RRNA methyltransferase; 99.2 1.7E-11 5.9E-16 116.9 9.7 127 278-404 29-213 (250)
67 3tr6_A O-methyltransferase; ce 99.2 3.6E-11 1.2E-15 112.4 11.2 124 276-404 44-173 (225)
68 3ntv_A MW1564 protein; rossman 99.2 7.9E-11 2.7E-15 111.2 13.4 118 281-403 56-174 (232)
69 2qm3_A Predicted methyltransfe 99.2 1.3E-10 4.6E-15 117.7 15.0 103 298-404 172-277 (373)
70 2h1r_A Dimethyladenosine trans 99.2 6E-11 2.1E-15 116.7 12.1 104 279-392 25-128 (299)
71 3tfw_A Putative O-methyltransf 99.2 1.7E-10 5.7E-15 110.3 14.7 120 280-404 47-169 (248)
72 2fca_A TRNA (guanine-N(7)-)-me 99.2 1.3E-10 4.4E-15 108.5 13.3 121 298-426 38-169 (213)
73 2avd_A Catechol-O-methyltransf 99.2 8.6E-11 2.9E-15 110.1 11.9 125 275-404 48-178 (229)
74 2yxl_A PH0851 protein, 450AA l 99.2 8E-11 2.7E-15 122.4 12.7 110 297-414 258-394 (450)
75 1l3i_A Precorrin-6Y methyltran 99.2 1.1E-10 3.6E-15 105.4 11.7 120 297-427 32-151 (192)
76 3dr5_A Putative O-methyltransf 99.2 9.6E-11 3.3E-15 110.2 11.8 117 285-404 41-162 (221)
77 3bzb_A Uncharacterized protein 99.2 2.8E-10 9.7E-15 110.8 15.4 138 284-427 63-227 (281)
78 3ldu_A Putative methylase; str 99.2 5.1E-11 1.7E-15 121.4 10.1 94 284-381 179-312 (385)
79 3duw_A OMT, O-methyltransferas 99.2 2.3E-10 7.7E-15 106.9 13.3 121 279-404 41-166 (223)
80 3mb5_A SAM-dependent methyltra 99.2 1.9E-10 6.6E-15 109.6 12.5 119 297-427 92-211 (255)
81 3ldg_A Putative uncharacterize 99.2 1.7E-10 5.7E-15 117.4 12.7 91 286-380 180-310 (384)
82 3k0b_A Predicted N6-adenine-sp 99.2 6.1E-11 2.1E-15 121.1 9.4 93 285-381 186-318 (393)
83 4gek_A TRNA (CMO5U34)-methyltr 99.1 4.1E-10 1.4E-14 108.6 14.2 106 294-404 66-177 (261)
84 2gpy_A O-methyltransferase; st 99.1 2.6E-10 8.8E-15 107.4 12.0 122 278-404 36-159 (233)
85 2vdv_E TRNA (guanine-N(7)-)-me 99.1 3.8E-10 1.3E-14 107.4 13.2 108 297-404 48-172 (246)
86 3r3h_A O-methyltransferase, SA 99.1 4.7E-11 1.6E-15 113.9 6.8 124 276-404 40-169 (242)
87 3uwp_A Histone-lysine N-methyl 99.1 3.2E-10 1.1E-14 115.2 12.7 128 274-404 151-287 (438)
88 1sui_A Caffeoyl-COA O-methyltr 99.1 4.6E-10 1.6E-14 107.2 13.2 123 277-404 60-189 (247)
89 2oyr_A UPF0341 protein YHIQ; a 99.1 3.1E-11 1.1E-15 116.2 4.9 84 297-382 85-176 (258)
90 1iy9_A Spermidine synthase; ro 99.1 3.7E-10 1.3E-14 109.8 12.3 108 297-404 74-188 (275)
91 1inl_A Spermidine synthase; be 99.1 2.7E-10 9.1E-15 111.9 11.3 108 297-404 89-204 (296)
92 3jwg_A HEN1, methyltransferase 99.1 8.6E-10 3E-14 102.5 13.8 104 298-404 29-140 (219)
93 4df3_A Fibrillarin-like rRNA/T 99.1 6.2E-10 2.1E-14 105.4 12.7 104 296-404 75-181 (233)
94 1sqg_A SUN protein, FMU protei 99.1 2.4E-10 8.2E-15 118.0 10.6 84 297-384 245-329 (429)
95 3adn_A Spermidine synthase; am 99.1 4.6E-10 1.6E-14 110.2 12.1 129 297-426 82-218 (294)
96 1o54_A SAM-dependent O-methylt 99.1 5.8E-10 2E-14 108.0 12.6 117 297-425 111-228 (277)
97 1ve3_A Hypothetical protein PH 99.1 7.6E-10 2.6E-14 103.0 12.8 115 283-404 23-141 (227)
98 3lbf_A Protein-L-isoaspartate 99.1 6.9E-10 2.4E-14 102.4 12.3 98 297-404 76-173 (210)
99 1jg1_A PIMT;, protein-L-isoasp 99.1 3.4E-10 1.2E-14 106.9 9.8 99 297-404 90-188 (235)
100 4hc4_A Protein arginine N-meth 99.1 5.6E-10 1.9E-14 113.0 12.0 98 298-401 83-185 (376)
101 3c3p_A Methyltransferase; NP_9 99.1 3E-10 1E-14 105.2 9.1 114 286-404 45-159 (210)
102 3jwh_A HEN1; methyltransferase 99.1 2.4E-09 8.2E-14 99.4 15.3 104 298-404 29-140 (217)
103 1zq9_A Probable dimethyladenos 99.1 1E-09 3.6E-14 107.1 13.4 105 280-393 12-116 (285)
104 1mjf_A Spermidine synthase; sp 99.1 5.2E-10 1.8E-14 109.0 11.0 105 297-404 74-192 (281)
105 3iv6_A Putative Zn-dependent a 99.1 2.7E-10 9.4E-15 109.8 8.8 130 275-417 19-155 (261)
106 1qam_A ERMC' methyltransferase 99.1 5.8E-10 2E-14 106.4 10.9 98 287-393 17-116 (244)
107 2pwy_A TRNA (adenine-N(1)-)-me 99.1 1E-09 3.5E-14 104.4 12.6 102 297-404 95-197 (258)
108 2yvl_A TRMI protein, hypotheti 99.1 1.9E-09 6.4E-14 101.9 14.4 100 297-404 90-189 (248)
109 3fut_A Dimethyladenosine trans 99.1 6.9E-10 2.4E-14 107.6 11.5 102 281-393 32-133 (271)
110 3tqs_A Ribosomal RNA small sub 99.1 4.6E-10 1.6E-14 107.9 10.2 103 280-392 13-118 (255)
111 1m6y_A S-adenosyl-methyltransf 99.1 2.5E-10 8.5E-15 112.4 8.3 90 288-381 14-109 (301)
112 3g89_A Ribosomal RNA small sub 99.0 4.4E-10 1.5E-14 107.6 9.6 120 298-427 80-203 (249)
113 3r0q_C Probable protein argini 99.0 1.1E-09 3.6E-14 111.2 12.8 115 284-404 47-168 (376)
114 3gru_A Dimethyladenosine trans 99.0 5.7E-10 2E-14 109.4 10.3 103 280-392 34-136 (295)
115 3c3y_A Pfomt, O-methyltransfer 99.0 9.4E-10 3.2E-14 104.3 11.5 123 277-404 51-180 (237)
116 1xdz_A Methyltransferase GIDB; 99.0 3.9E-10 1.3E-14 106.8 8.6 102 298-404 70-173 (240)
117 3ofk_A Nodulation protein S; N 99.0 1.2E-09 4.2E-14 101.1 11.4 115 281-404 32-153 (216)
118 2pjd_A Ribosomal RNA small sub 99.0 9.5E-10 3.3E-14 110.1 11.5 130 266-404 165-302 (343)
119 2pt6_A Spermidine synthase; tr 99.0 7.7E-10 2.6E-14 109.9 10.4 108 297-404 115-229 (321)
120 1nkv_A Hypothetical protein YJ 99.0 2E-09 6.9E-14 102.2 13.0 103 297-404 35-139 (256)
121 1nt2_A Fibrillarin-like PRE-rR 99.0 1.5E-09 5E-14 101.2 11.7 102 297-404 56-160 (210)
122 1i9g_A Hypothetical protein RV 99.0 1.4E-09 4.6E-14 105.1 11.8 119 297-425 98-218 (280)
123 2pbf_A Protein-L-isoaspartate 99.0 1.9E-09 6.6E-14 100.7 12.5 119 282-404 64-192 (227)
124 3ckk_A TRNA (guanine-N(7)-)-me 99.0 2.2E-09 7.5E-14 101.8 12.8 108 297-404 45-167 (235)
125 3f4k_A Putative methyltransfer 99.0 4.8E-09 1.7E-13 99.6 14.6 104 297-404 45-149 (257)
126 3fpf_A Mtnas, putative unchara 99.0 6.5E-09 2.2E-13 101.6 15.6 101 296-404 120-221 (298)
127 3ftd_A Dimethyladenosine trans 99.0 1.7E-09 5.8E-14 103.6 11.3 114 280-403 15-128 (249)
128 3fzg_A 16S rRNA methylase; met 99.0 9.4E-10 3.2E-14 100.4 8.9 87 284-376 35-121 (200)
129 2hnk_A SAM-dependent O-methylt 99.0 1.8E-09 6E-14 102.2 11.2 121 279-404 43-180 (239)
130 1u2z_A Histone-lysine N-methyl 99.0 4.7E-09 1.6E-13 108.0 15.2 126 275-404 221-358 (433)
131 1jsx_A Glucose-inhibited divis 99.0 1.7E-09 5.7E-14 99.5 10.7 100 298-404 65-164 (207)
132 3hem_A Cyclopropane-fatty-acyl 99.0 6.6E-09 2.3E-13 101.6 15.6 112 286-404 58-182 (302)
133 3id6_C Fibrillarin-like rRNA/T 99.0 6.5E-09 2.2E-13 98.4 15.0 102 297-403 75-180 (232)
134 3q7e_A Protein arginine N-meth 99.0 2.9E-09 9.8E-14 106.9 13.0 101 298-403 66-171 (349)
135 1xj5_A Spermidine synthase 1; 99.0 2.2E-09 7.4E-14 107.2 11.7 108 297-404 119-234 (334)
136 2b25_A Hypothetical protein; s 99.0 4.1E-09 1.4E-13 105.0 13.7 134 282-425 91-234 (336)
137 3cbg_A O-methyltransferase; cy 99.0 1.7E-09 5.8E-14 102.1 10.3 121 279-404 55-181 (232)
138 3dtn_A Putative methyltransfer 99.0 3.7E-09 1.3E-13 99.0 12.5 108 290-404 33-147 (234)
139 3v97_A Ribosomal RNA large sub 99.0 3.5E-09 1.2E-13 115.7 13.8 95 285-381 175-314 (703)
140 2b2c_A Spermidine synthase; be 99.0 2.1E-09 7.2E-14 106.4 10.9 108 297-404 107-221 (314)
141 3kkz_A Uncharacterized protein 99.0 5.6E-09 1.9E-13 100.1 13.6 104 297-404 45-149 (267)
142 1uir_A Polyamine aminopropyltr 99.0 2.2E-09 7.6E-14 106.2 10.8 108 297-404 76-194 (314)
143 2fyt_A Protein arginine N-meth 99.0 5.7E-09 1.9E-13 104.4 13.8 110 288-402 52-168 (340)
144 2pxx_A Uncharacterized protein 98.9 1.8E-09 6E-14 99.4 9.2 86 288-380 32-117 (215)
145 3sm3_A SAM-dependent methyltra 98.9 1.1E-09 3.6E-14 102.3 7.7 112 290-404 22-140 (235)
146 1r18_A Protein-L-isoaspartate( 98.9 1.6E-09 5.5E-14 101.6 9.0 118 282-404 68-193 (227)
147 1g6q_1 HnRNP arginine N-methyl 98.9 5.6E-09 1.9E-13 103.9 13.3 100 298-402 38-142 (328)
148 2o07_A Spermidine synthase; st 98.9 1.4E-09 4.9E-14 107.2 8.7 108 297-404 94-208 (304)
149 1vbf_A 231AA long hypothetical 98.9 5.2E-09 1.8E-13 98.0 12.1 96 297-404 69-164 (231)
150 1kpg_A CFA synthase;, cyclopro 98.9 1.7E-08 5.8E-13 97.7 16.0 112 285-404 49-167 (287)
151 1i1n_A Protein-L-isoaspartate 98.9 4.7E-09 1.6E-13 98.0 11.6 118 282-404 61-181 (226)
152 3bwc_A Spermidine synthase; SA 98.9 4.6E-09 1.6E-13 103.5 11.9 129 297-426 94-230 (304)
153 3ocj_A Putative exported prote 98.9 2E-09 6.7E-14 105.7 9.3 109 292-404 112-226 (305)
154 2xvm_A Tellurite resistance pr 98.9 6E-09 2.1E-13 94.7 11.7 99 298-403 32-134 (199)
155 3b3j_A Histone-arginine methyl 98.9 3.2E-09 1.1E-13 111.1 11.0 115 284-404 142-262 (480)
156 3bus_A REBM, methyltransferase 98.9 1.6E-08 5.5E-13 97.0 15.0 119 282-404 43-165 (273)
157 3dlc_A Putative S-adenosyl-L-m 98.9 6.2E-09 2.1E-13 95.8 11.6 114 287-404 31-147 (219)
158 2i7c_A Spermidine synthase; tr 98.9 6E-09 2.1E-13 101.5 12.0 108 297-404 77-191 (283)
159 1pjz_A Thiopurine S-methyltran 98.9 5.4E-09 1.8E-13 96.6 11.1 106 297-404 21-140 (203)
160 3g5t_A Trans-aconitate 3-methy 98.9 1.1E-08 3.7E-13 99.9 13.8 117 286-403 23-147 (299)
161 3m70_A Tellurite resistance pr 98.9 7.1E-09 2.4E-13 100.4 12.3 99 298-404 120-222 (286)
162 3vc1_A Geranyl diphosphate 2-C 98.9 6.7E-09 2.3E-13 102.2 12.2 123 276-404 93-220 (312)
163 4htf_A S-adenosylmethionine-de 98.9 1.2E-08 4E-13 98.9 13.6 103 298-404 68-172 (285)
164 2yxe_A Protein-L-isoaspartate 98.9 1.2E-08 4E-13 94.5 12.7 113 282-404 63-176 (215)
165 3d2l_A SAM-dependent methyltra 98.9 8E-09 2.7E-13 97.0 11.4 110 286-404 21-136 (243)
166 2fk8_A Methoxy mycolic acid sy 98.9 2.9E-08 1E-12 97.6 15.4 112 286-404 76-193 (318)
167 2ex4_A Adrenal gland protein A 98.9 5.1E-09 1.7E-13 98.9 9.5 117 283-404 61-184 (241)
168 3uzu_A Ribosomal RNA small sub 98.9 4.3E-09 1.5E-13 102.4 9.1 103 278-391 24-135 (279)
169 1vl5_A Unknown conserved prote 98.9 1.4E-08 4.7E-13 96.9 12.5 102 297-404 36-139 (260)
170 3hnr_A Probable methyltransfer 98.9 1.6E-08 5.3E-13 93.7 12.5 106 286-404 35-144 (220)
171 1xxl_A YCGJ protein; structura 98.9 1.9E-08 6.4E-13 95.0 13.2 102 297-404 20-123 (239)
172 3p2e_A 16S rRNA methylase; met 98.9 3.1E-09 1.1E-13 100.1 7.7 104 297-403 23-137 (225)
173 4hg2_A Methyltransferase type 98.9 7E-09 2.4E-13 99.7 10.3 106 287-404 28-134 (257)
174 3cgg_A SAM-dependent methyltra 98.9 2E-08 7E-13 90.4 12.8 122 295-430 43-169 (195)
175 2y1w_A Histone-arginine methyl 98.9 1.2E-08 4.2E-13 102.3 12.4 101 298-404 50-154 (348)
176 3g5l_A Putative S-adenosylmeth 98.9 2.9E-08 9.8E-13 94.2 14.1 108 289-404 33-144 (253)
177 3l8d_A Methyltransferase; stru 98.9 1.2E-08 4.1E-13 95.8 11.4 109 287-404 42-152 (242)
178 2qfm_A Spermine synthase; sper 98.9 4.6E-09 1.6E-13 105.1 8.8 109 298-407 188-316 (364)
179 2yqz_A Hypothetical protein TT 98.9 1.5E-08 5.2E-13 96.2 12.1 116 282-404 20-140 (263)
180 3lcc_A Putative methyl chlorid 98.8 8.7E-09 3E-13 96.8 10.2 101 298-404 66-170 (235)
181 3pfg_A N-methyltransferase; N, 98.8 1.4E-08 4.7E-13 97.1 11.7 109 284-404 36-150 (263)
182 1zx0_A Guanidinoacetate N-meth 98.8 4.2E-09 1.4E-13 99.3 7.9 76 297-377 59-135 (236)
183 2kw5_A SLR1183 protein; struct 98.8 3E-08 1E-12 90.6 13.5 103 294-404 26-130 (202)
184 2f8l_A Hypothetical protein LM 98.8 6.8E-09 2.3E-13 103.8 9.8 77 298-380 130-211 (344)
185 1y8c_A S-adenosylmethionine-de 98.8 1.4E-08 4.6E-13 95.4 11.2 110 287-404 26-141 (246)
186 3orh_A Guanidinoacetate N-meth 98.8 9E-09 3.1E-13 97.4 10.0 79 297-380 59-138 (236)
187 3gjy_A Spermidine synthase; AP 98.8 1E-08 3.4E-13 101.3 10.5 101 301-404 92-199 (317)
188 3m33_A Uncharacterized protein 98.8 1.8E-08 6.3E-13 94.3 11.6 75 295-379 45-120 (226)
189 3mgg_A Methyltransferase; NYSG 98.8 2.1E-08 7.1E-13 96.4 12.1 104 297-404 36-141 (276)
190 3e23_A Uncharacterized protein 98.8 1.8E-08 6.3E-13 92.8 11.3 103 289-404 34-140 (211)
191 3ggd_A SAM-dependent methyltra 98.8 1.4E-08 4.7E-13 95.9 10.5 107 290-404 48-162 (245)
192 3dh0_A SAM dependent methyltra 98.8 1.1E-08 3.9E-13 94.6 9.6 104 297-404 36-142 (219)
193 2gb4_A Thiopurine S-methyltran 98.8 1.7E-08 5.9E-13 96.7 11.1 104 297-402 67-188 (252)
194 2o57_A Putative sarcosine dime 98.8 3.2E-08 1.1E-12 96.2 12.8 104 297-404 81-186 (297)
195 2okc_A Type I restriction enzy 98.8 8.4E-09 2.9E-13 106.9 9.0 123 275-404 151-307 (445)
196 2p7i_A Hypothetical protein; p 98.8 2E-08 6.8E-13 94.2 10.5 107 286-404 31-140 (250)
197 2bm8_A Cephalosporin hydroxyla 98.8 1.5E-08 5.2E-13 96.0 9.7 108 286-404 70-186 (236)
198 2oo3_A Protein involved in cat 98.8 3.6E-09 1.2E-13 102.1 5.2 129 287-427 82-217 (283)
199 1qyr_A KSGA, high level kasuga 98.8 9.3E-09 3.2E-13 98.6 7.9 101 280-391 5-111 (252)
200 1ri5_A MRNA capping enzyme; me 98.8 2E-08 6.8E-13 97.3 10.3 107 295-404 61-173 (298)
201 3gu3_A Methyltransferase; alph 98.8 3.4E-08 1.2E-12 95.8 11.9 102 297-404 21-125 (284)
202 3bkx_A SAM-dependent methyltra 98.8 4.3E-08 1.5E-12 94.1 12.4 106 297-404 42-158 (275)
203 1xtp_A LMAJ004091AAA; SGPP, st 98.8 2.8E-08 9.5E-13 94.0 10.9 100 298-404 93-196 (254)
204 2ar0_A M.ecoki, type I restric 98.8 1.5E-08 5.1E-13 107.5 9.6 125 274-404 148-312 (541)
205 3mq2_A 16S rRNA methyltransfer 98.8 7.7E-09 2.6E-13 96.0 6.4 106 297-404 26-139 (218)
206 3g2m_A PCZA361.24; SAM-depende 98.8 1.9E-08 6.5E-13 98.2 9.6 103 298-404 82-189 (299)
207 1wzn_A SAM-dependent methyltra 98.8 7E-08 2.4E-12 91.3 13.3 99 298-404 41-144 (252)
208 2gs9_A Hypothetical protein TT 98.8 3.9E-08 1.3E-12 90.5 11.0 116 276-404 12-131 (211)
209 3ujc_A Phosphoethanolamine N-m 98.7 3.2E-08 1.1E-12 94.0 10.5 108 290-404 45-158 (266)
210 3htx_A HEN1; HEN1, small RNA m 98.7 6.4E-08 2.2E-12 105.4 13.5 120 283-404 704-833 (950)
211 3dou_A Ribosomal RNA large sub 98.7 6.3E-08 2.2E-12 88.7 11.5 81 284-380 9-101 (191)
212 4fzv_A Putative methyltransfer 98.7 3.2E-08 1.1E-12 99.4 10.3 87 296-382 146-235 (359)
213 3h2b_A SAM-dependent methyltra 98.7 8.5E-08 2.9E-12 87.7 12.3 95 299-404 42-140 (203)
214 1yub_A Ermam, rRNA methyltrans 98.7 1.4E-09 4.8E-14 103.6 0.2 86 298-392 29-114 (245)
215 3g07_A 7SK snRNA methylphospha 98.7 3E-08 1E-12 96.8 9.6 106 298-404 46-219 (292)
216 3ou2_A SAM-dependent methyltra 98.7 6.8E-08 2.3E-12 88.9 11.3 106 287-404 36-145 (218)
217 2ih2_A Modification methylase 98.7 1.3E-08 4.4E-13 104.2 7.0 91 275-382 19-110 (421)
218 4fsd_A Arsenic methyltransfera 98.7 4.5E-08 1.5E-12 99.3 10.8 107 298-404 83-202 (383)
219 3bkw_A MLL3908 protein, S-aden 98.7 6.9E-08 2.4E-12 90.6 11.2 99 298-404 43-143 (243)
220 2p35_A Trans-aconitate 2-methy 98.7 5.4E-08 1.8E-12 92.3 9.9 97 298-404 33-131 (259)
221 2p8j_A S-adenosylmethionine-de 98.7 6.4E-08 2.2E-12 88.7 10.0 113 285-404 11-127 (209)
222 3bxo_A N,N-dimethyltransferase 98.7 6.9E-08 2.4E-12 90.3 10.4 108 285-404 27-140 (239)
223 4azs_A Methyltransferase WBDD; 98.7 4.3E-08 1.5E-12 104.7 10.0 76 296-376 64-140 (569)
224 3lcv_B Sisomicin-gentamicin re 98.7 4.4E-08 1.5E-12 93.5 8.9 89 284-378 118-206 (281)
225 3bgv_A MRNA CAP guanine-N7 met 98.7 1.3E-07 4.3E-12 93.0 12.5 107 297-404 33-154 (313)
226 3lkd_A Type I restriction-modi 98.7 1.1E-07 3.7E-12 100.7 12.6 105 274-381 196-308 (542)
227 1ej0_A FTSJ; methyltransferase 98.7 1.2E-07 4.2E-12 83.6 11.1 112 296-426 20-152 (180)
228 2a14_A Indolethylamine N-methy 98.6 2.9E-08 9.8E-13 95.4 6.6 105 298-404 55-196 (263)
229 3ege_A Putative methyltransfer 98.6 4.8E-08 1.6E-12 93.5 8.0 96 297-404 33-130 (261)
230 2avn_A Ubiquinone/menaquinone 98.6 1.2E-07 4.1E-12 90.5 10.3 106 286-404 42-151 (260)
231 3s1s_A Restriction endonucleas 98.6 1.7E-07 5.8E-12 101.9 12.3 106 275-381 295-410 (878)
232 2nyu_A Putative ribosomal RNA 98.6 2.7E-07 9.2E-12 83.7 11.9 122 286-426 8-161 (196)
233 3dli_A Methyltransferase; PSI- 98.6 8.1E-08 2.8E-12 90.4 8.7 96 296-404 39-139 (240)
234 2plw_A Ribosomal RNA methyltra 98.6 4.1E-07 1.4E-11 82.9 12.7 79 287-379 9-115 (201)
235 3thr_A Glycine N-methyltransfe 98.6 7.4E-08 2.5E-12 93.4 7.9 105 298-404 57-174 (293)
236 3e8s_A Putative SAM dependent 98.6 3E-07 1E-11 84.9 11.7 96 298-404 52-151 (227)
237 3ccf_A Cyclopropane-fatty-acyl 98.6 2.2E-07 7.5E-12 89.6 11.1 96 297-404 56-153 (279)
238 3frh_A 16S rRNA methylase; met 98.6 3E-07 1E-11 86.8 11.4 83 285-377 93-175 (253)
239 2cmg_A Spermidine synthase; tr 98.6 1.4E-07 4.8E-12 90.9 9.0 99 297-404 71-170 (262)
240 1p91_A Ribosomal RNA large sub 98.5 2.7E-07 9.3E-12 88.3 10.0 107 284-404 70-177 (269)
241 3g7u_A Cytosine-specific methy 98.5 1.1E-07 3.6E-12 96.4 7.4 93 300-402 3-117 (376)
242 3i9f_A Putative type 11 methyl 98.5 1.9E-07 6.4E-12 82.8 8.2 94 297-404 16-111 (170)
243 1g55_A DNA cytosine methyltran 98.5 1.3E-07 4.4E-12 94.7 7.9 71 300-379 3-77 (343)
244 1af7_A Chemotaxis receptor met 98.5 4E-07 1.4E-11 88.2 11.0 128 272-404 81-251 (274)
245 2i62_A Nicotinamide N-methyltr 98.5 2E-07 6.8E-12 88.5 7.7 106 298-404 56-197 (265)
246 2vdw_A Vaccinia virus capping 98.5 2.7E-07 9.2E-12 90.7 8.7 103 298-404 48-168 (302)
247 3gwz_A MMCR; methyltransferase 98.5 3.2E-06 1.1E-10 85.1 16.2 100 298-403 202-305 (369)
248 1vlm_A SAM-dependent methyltra 98.4 3.9E-07 1.3E-11 84.6 8.6 111 276-404 26-138 (219)
249 1qzz_A RDMB, aclacinomycin-10- 98.4 1.1E-06 3.7E-11 88.4 12.2 102 297-404 181-286 (374)
250 3khk_A Type I restriction-modi 98.4 2.3E-07 8E-12 98.3 7.3 102 275-382 225-341 (544)
251 3dp7_A SAM-dependent methyltra 98.4 1.3E-06 4.4E-11 87.9 12.3 76 298-376 179-254 (363)
252 3opn_A Putative hemolysin; str 98.4 7.4E-07 2.5E-11 84.2 9.4 99 298-404 37-136 (232)
253 2qe6_A Uncharacterized protein 98.4 3.3E-06 1.1E-10 81.6 14.2 100 299-404 78-195 (274)
254 1tw3_A COMT, carminomycin 4-O- 98.4 1.5E-06 5E-11 87.0 11.9 101 298-404 183-287 (360)
255 3hp7_A Hemolysin, putative; st 98.4 6.1E-07 2.1E-11 87.5 8.7 96 298-403 85-184 (291)
256 1x19_A CRTF-related protein; m 98.4 4E-06 1.4E-10 83.9 14.6 101 297-403 189-293 (359)
257 2r3s_A Uncharacterized protein 98.4 1.7E-06 5.8E-11 85.4 11.0 102 297-403 164-269 (335)
258 3i53_A O-methyltransferase; CO 98.3 3E-06 1E-10 83.8 12.6 73 298-376 169-241 (332)
259 3mcz_A O-methyltransferase; ad 98.3 2.1E-06 7.3E-11 85.5 11.2 102 299-403 180-285 (352)
260 3cc8_A Putative methyltransfer 98.3 8.2E-07 2.8E-11 82.1 7.6 101 292-404 25-129 (230)
261 2oxt_A Nucleoside-2'-O-methylt 98.3 5.1E-07 1.7E-11 87.0 5.8 76 296-379 72-149 (265)
262 2ip2_A Probable phenazine-spec 98.3 3.5E-06 1.2E-10 83.3 10.9 99 300-404 169-271 (334)
263 2g72_A Phenylethanolamine N-me 98.2 2E-06 7E-11 83.2 8.3 106 298-404 71-214 (289)
264 2c7p_A Modification methylase 98.2 5.4E-06 1.9E-10 82.3 11.3 93 299-404 11-119 (327)
265 2k4m_A TR8_protein, UPF0146 pr 98.2 3.9E-06 1.3E-10 72.8 8.5 91 284-394 21-113 (153)
266 2zig_A TTHA0409, putative modi 98.2 3.3E-06 1.1E-10 82.6 8.5 56 287-344 223-279 (297)
267 2wa2_A Non-structural protein 98.2 2.8E-07 9.5E-12 89.5 0.7 76 296-379 80-157 (276)
268 2aot_A HMT, histamine N-methyl 98.1 4.3E-06 1.5E-10 81.1 7.6 105 298-404 52-171 (292)
269 3ufb_A Type I restriction-modi 98.1 8.4E-06 2.9E-10 86.1 9.8 102 275-382 197-314 (530)
270 1wg8_A Predicted S-adenosylmet 98.1 5.2E-06 1.8E-10 80.0 7.4 84 288-380 10-99 (285)
271 3cvo_A Methyltransferase-like 98.1 5.8E-05 2E-09 69.5 14.0 113 281-403 17-152 (202)
272 2p41_A Type II methyltransfera 98.1 9.3E-06 3.2E-10 79.8 9.2 74 296-380 80-158 (305)
273 3o4f_A Spermidine synthase; am 98.0 7E-05 2.4E-09 72.9 14.6 108 297-404 82-197 (294)
274 1g60_A Adenine-specific methyl 98.0 9E-06 3.1E-10 77.9 7.6 46 297-344 211-256 (260)
275 2xyq_A Putative 2'-O-methyl tr 98.0 1.8E-05 6.1E-10 77.2 8.6 121 281-426 43-187 (290)
276 3ua3_A Protein arginine N-meth 97.9 2.1E-05 7.2E-10 84.4 9.5 101 299-402 410-531 (745)
277 3giw_A Protein of unknown func 97.9 5.2E-05 1.8E-09 73.1 11.1 103 299-404 79-199 (277)
278 4a6d_A Hydroxyindole O-methylt 97.9 0.00011 3.9E-09 73.3 14.0 72 298-376 179-250 (353)
279 3ubt_Y Modification methylase 97.9 2.2E-05 7.4E-10 77.6 8.4 69 301-379 2-70 (331)
280 3lst_A CALO1 methyltransferase 97.9 3.9E-05 1.3E-09 76.4 9.6 97 298-403 184-284 (348)
281 4e2x_A TCAB9; kijanose, tetron 97.9 8.9E-06 3E-10 83.0 4.9 111 286-404 93-207 (416)
282 3sso_A Methyltransferase; macr 97.8 2.4E-05 8.3E-10 79.2 7.7 102 289-404 206-323 (419)
283 2qy6_A UPF0209 protein YFCK; s 97.8 2.6E-05 8.8E-10 74.7 7.3 106 298-403 60-211 (257)
284 2zfu_A Nucleomethylin, cerebra 97.8 3.8E-05 1.3E-09 70.5 8.2 113 287-428 57-171 (215)
285 4gqb_A Protein arginine N-meth 97.8 6.2E-05 2.1E-09 80.6 10.3 98 299-401 358-463 (637)
286 4h0n_A DNMT2; SAH binding, tra 97.7 0.00011 3.8E-09 72.9 10.0 133 301-444 5-158 (333)
287 1fp2_A Isoflavone O-methyltran 97.7 7.6E-05 2.6E-09 74.4 8.2 67 297-377 187-253 (352)
288 3reo_A (ISO)eugenol O-methyltr 97.6 0.00021 7.1E-09 71.8 10.9 66 298-377 203-268 (368)
289 2qrv_A DNA (cytosine-5)-methyl 97.6 8.2E-05 2.8E-09 72.6 7.6 73 298-379 15-92 (295)
290 1i4w_A Mitochondrial replicati 97.5 0.00045 1.5E-08 69.0 11.5 107 279-392 35-164 (353)
291 3p9c_A Caffeic acid O-methyltr 97.5 0.00027 9.1E-09 70.9 9.8 65 298-376 201-265 (364)
292 3qv2_A 5-cytosine DNA methyltr 97.5 0.00011 3.7E-09 72.8 6.8 75 299-383 10-89 (327)
293 1fp1_D Isoliquiritigenin 2'-O- 97.5 0.00022 7.6E-09 71.5 9.2 92 298-403 209-304 (372)
294 1zg3_A Isoflavanone 4'-O-methy 97.5 0.00021 7.1E-09 71.3 8.1 68 298-379 193-260 (358)
295 3tka_A Ribosomal RNA small sub 97.4 0.00016 5.4E-09 71.3 5.3 87 287-380 44-138 (347)
296 3me5_A Cytosine-specific methy 97.3 0.00025 8.5E-09 73.8 5.8 75 300-380 89-179 (482)
297 4auk_A Ribosomal RNA large sub 97.2 0.00051 1.7E-08 68.7 7.1 94 296-403 209-304 (375)
298 1boo_A Protein (N-4 cytosine-s 97.0 0.00067 2.3E-08 66.9 6.0 47 296-344 250-296 (323)
299 3p8z_A Mtase, non-structural p 97.0 0.0021 7.3E-08 60.0 8.2 89 284-379 63-153 (267)
300 1eg2_A Modification methylase 96.9 0.0011 3.7E-08 65.3 6.4 47 296-344 240-289 (319)
301 2wk1_A NOVP; transferase, O-me 96.7 0.0022 7.6E-08 62.0 7.0 118 282-404 88-243 (282)
302 2ld4_A Anamorsin; methyltransf 96.7 0.00086 3E-08 59.3 3.8 86 296-404 10-100 (176)
303 3c6k_A Spermine synthase; sper 96.7 0.004 1.4E-07 62.5 8.8 105 298-403 205-329 (381)
304 3lkz_A Non-structural protein 96.6 0.0042 1.4E-07 59.8 7.3 91 284-381 79-171 (321)
305 2py6_A Methyltransferase FKBM; 96.5 0.0059 2E-07 62.2 8.8 64 297-360 225-291 (409)
306 3gcz_A Polyprotein; flavivirus 96.4 0.0012 4E-08 63.4 2.4 93 284-384 75-171 (282)
307 3evf_A RNA-directed RNA polyme 96.3 0.0017 5.7E-08 62.2 2.8 94 284-383 59-154 (277)
308 4ft4_B DNA (cytosine-5)-methyl 95.9 0.0067 2.3E-07 66.9 5.6 43 300-342 213-260 (784)
309 3swr_A DNA (cytosine-5)-methyl 95.8 0.0086 2.9E-07 67.3 6.2 72 300-380 541-628 (1002)
310 4dkj_A Cytosine-specific methy 95.5 0.015 5E-07 59.1 5.7 44 300-343 11-59 (403)
311 3av4_A DNA (cytosine-5)-methyl 95.1 0.022 7.4E-07 65.8 6.3 73 299-380 851-939 (1330)
312 2px2_A Genome polyprotein [con 93.9 0.073 2.5E-06 50.3 5.7 87 286-383 60-153 (269)
313 3eld_A Methyltransferase; flav 93.4 0.075 2.6E-06 51.2 5.0 39 295-333 78-116 (300)
314 2gn4_A FLAA1 protein, UDP-GLCN 87.9 4.1 0.00014 39.5 11.9 100 298-405 20-142 (344)
315 3s2e_A Zinc-containing alcohol 87.4 0.42 1.4E-05 46.6 4.2 95 297-404 165-263 (340)
316 3e8x_A Putative NAD-dependent 87.1 6.5 0.00022 35.5 12.0 95 298-405 20-131 (236)
317 3vyw_A MNMC2; tRNA wobble urid 86.0 2.1 7.1E-05 41.5 8.2 104 300-403 98-224 (308)
318 3o26_A Salutaridine reductase; 85.7 8.8 0.0003 35.9 12.6 78 298-380 11-101 (311)
319 2dph_A Formaldehyde dismutase; 85.4 0.9 3.1E-05 45.4 5.5 44 296-339 183-227 (398)
320 3pvc_A TRNA 5-methylaminomethy 84.1 1.4 4.7E-05 47.5 6.6 104 299-402 59-208 (689)
321 2efj_A 3,7-dimethylxanthine me 83.9 8.3 0.00028 38.5 11.8 73 299-376 53-155 (384)
322 4dcm_A Ribosomal RNA large sub 83.7 6.5 0.00022 39.0 10.9 111 283-404 24-135 (375)
323 1f8f_A Benzyl alcohol dehydrog 83.4 1.5 5E-05 43.3 6.0 97 296-404 188-289 (371)
324 1kol_A Formaldehyde dehydrogen 83.4 1.7 6E-05 43.2 6.6 45 296-340 183-228 (398)
325 1boo_A Protein (N-4 cytosine-s 83.3 0.62 2.1E-05 45.5 3.2 54 351-404 13-83 (323)
326 1g60_A Adenine-specific methyl 83.1 0.34 1.2E-05 45.7 1.2 52 353-404 5-73 (260)
327 1y1p_A ARII, aldehyde reductas 82.6 16 0.00056 34.4 13.1 104 298-406 10-133 (342)
328 1e3j_A NADP(H)-dependent ketos 82.5 3.4 0.00012 40.3 8.2 96 296-404 166-271 (352)
329 1pl8_A Human sorbitol dehydrog 81.6 2.3 7.8E-05 41.6 6.6 97 296-404 169-273 (356)
330 3fwz_A Inner membrane protein 81.2 3.9 0.00013 34.1 7.1 91 300-402 8-103 (140)
331 3llv_A Exopolyphosphatase-rela 80.9 5.9 0.0002 32.7 8.1 91 300-404 7-103 (141)
332 2zig_A TTHA0409, putative modi 79.3 0.98 3.4E-05 43.3 2.9 31 351-381 20-51 (297)
333 1eg2_A Modification methylase 78.5 0.85 2.9E-05 44.5 2.2 53 352-404 38-105 (319)
334 3nzo_A UDP-N-acetylglucosamine 78.3 20 0.00067 35.5 12.4 105 299-405 35-165 (399)
335 2g1p_A DNA adenine methylase; 77.4 2.3 7.8E-05 40.5 4.9 45 287-335 16-60 (278)
336 2dpm_A M.dpnii 1, protein (ade 77.3 3 0.0001 39.9 5.7 46 287-336 23-69 (284)
337 1xg5_A ARPG836; short chain de 77.3 29 0.001 32.0 12.7 78 298-379 31-120 (279)
338 1yb1_A 17-beta-hydroxysteroid 77.1 30 0.001 31.9 12.6 76 298-379 30-117 (272)
339 1fmc_A 7 alpha-hydroxysteroid 77.1 23 0.0008 31.9 11.7 75 298-378 10-96 (255)
340 1lss_A TRK system potassium up 76.7 9.9 0.00034 30.8 8.2 91 300-403 5-101 (140)
341 3c85_A Putative glutathione-re 76.1 6.3 0.00022 34.2 7.1 91 299-402 39-137 (183)
342 3fpc_A NADP-dependent alcohol 76.1 3 0.0001 40.6 5.5 97 296-404 164-266 (352)
343 3ruf_A WBGU; rossmann fold, UD 75.8 14 0.00047 35.3 10.2 106 298-406 24-152 (351)
344 4ej6_A Putative zinc-binding d 75.3 4.2 0.00015 40.0 6.4 97 296-404 180-284 (370)
345 3ius_A Uncharacterized conserv 75.2 31 0.0011 31.7 12.2 92 300-406 6-104 (286)
346 3r24_A NSP16, 2'-O-methyl tran 74.7 4.6 0.00016 38.9 6.0 79 281-378 89-177 (344)
347 3dqp_A Oxidoreductase YLBE; al 73.9 7.9 0.00027 34.4 7.3 92 301-406 2-107 (219)
348 3m6i_A L-arabinitol 4-dehydrog 73.4 4.2 0.00014 39.8 5.7 99 296-404 177-283 (363)
349 1cdo_A Alcohol dehydrogenase; 72.7 3.9 0.00013 40.2 5.4 96 297-404 191-294 (374)
350 2c07_A 3-oxoacyl-(acyl-carrier 72.5 45 0.0015 30.9 12.7 76 299-379 44-130 (285)
351 3ew7_A LMO0794 protein; Q8Y8U8 72.2 7.7 0.00026 34.2 6.8 89 305-406 5-104 (221)
352 2jhf_A Alcohol dehydrogenase E 71.7 4.3 0.00015 39.9 5.4 96 297-404 190-293 (374)
353 3jv7_A ADH-A; dehydrogenase, n 71.3 5.5 0.00019 38.5 6.0 97 296-404 169-270 (345)
354 1e3i_A Alcohol dehydrogenase, 71.1 4.5 0.00015 39.8 5.4 96 297-404 194-297 (376)
355 1p0f_A NADP-dependent alcohol 71.1 3.8 0.00013 40.3 4.8 96 297-404 190-293 (373)
356 3ps9_A TRNA 5-methylaminomethy 70.1 4.8 0.00016 43.0 5.7 104 300-403 68-217 (676)
357 1zk4_A R-specific alcohol dehy 69.6 32 0.0011 30.9 10.6 74 299-379 6-91 (251)
358 2fzw_A Alcohol dehydrogenase c 69.6 4.2 0.00014 39.9 4.8 96 297-404 189-292 (373)
359 3r6d_A NAD-dependent epimerase 69.3 16 0.00056 32.3 8.4 95 302-407 8-110 (221)
360 3ip1_A Alcohol dehydrogenase, 69.3 6.9 0.00024 38.9 6.4 44 297-340 212-256 (404)
361 2pnf_A 3-oxoacyl-[acyl-carrier 69.1 31 0.0011 30.9 10.4 76 299-379 7-94 (248)
362 3m2p_A UDP-N-acetylglucosamine 68.5 16 0.00054 34.3 8.5 89 300-405 3-109 (311)
363 1vj0_A Alcohol dehydrogenase, 68.5 6.9 0.00024 38.6 6.1 44 296-339 193-237 (380)
364 3two_A Mannitol dehydrogenase; 68.3 4.5 0.00015 39.3 4.6 91 296-404 174-265 (348)
365 3uko_A Alcohol dehydrogenase c 67.2 3.6 0.00012 40.6 3.7 96 297-404 192-295 (378)
366 1uuf_A YAHK, zinc-type alcohol 67.2 5.3 0.00018 39.3 5.0 44 296-340 192-236 (369)
367 1id1_A Putative potassium chan 67.2 16 0.00053 30.6 7.4 95 300-403 4-104 (153)
368 4fn4_A Short chain dehydrogena 67.1 25 0.00085 32.7 9.3 75 298-378 6-92 (254)
369 3enk_A UDP-glucose 4-epimerase 67.1 8.6 0.00029 36.6 6.3 101 299-405 5-129 (341)
370 3tos_A CALS11; methyltransfera 66.8 18 0.00063 33.8 8.3 105 299-404 70-216 (257)
371 2cfc_A 2-(R)-hydroxypropyl-COM 66.5 39 0.0013 30.3 10.6 74 299-378 2-88 (250)
372 1xq6_A Unknown protein; struct 66.4 18 0.0006 32.4 8.1 96 299-407 4-135 (253)
373 2uvd_A 3-oxoacyl-(acyl-carrier 66.4 61 0.0021 29.1 11.9 75 299-379 4-91 (246)
374 3qvo_A NMRA family protein; st 66.3 31 0.001 30.9 9.7 94 300-405 24-125 (236)
375 3uog_A Alcohol dehydrogenase; 66.0 9.4 0.00032 37.3 6.5 94 297-404 188-287 (363)
376 3l4b_C TRKA K+ channel protien 65.5 14 0.00047 33.0 7.1 88 306-402 5-97 (218)
377 4a2c_A Galactitol-1-phosphate 65.4 17 0.00059 34.8 8.2 96 297-404 159-260 (346)
378 1yf3_A DNA adenine methylase; 65.3 3.1 0.00011 39.1 2.7 45 287-336 13-57 (259)
379 2dpm_A M.dpnii 1, protein (ade 64.9 15 0.00053 34.8 7.5 42 332-382 156-199 (284)
380 4id9_A Short-chain dehydrogena 62.9 10 0.00035 36.2 6.0 89 298-405 18-126 (347)
381 3l9w_A Glutathione-regulated p 62.4 12 0.0004 37.7 6.4 92 300-403 5-101 (413)
382 1sb8_A WBPP; epimerase, 4-epim 62.3 27 0.00092 33.3 8.9 103 298-406 26-154 (352)
383 2wsb_A Galactitol dehydrogenas 62.2 73 0.0025 28.5 11.6 73 298-379 10-94 (254)
384 3h2s_A Putative NADH-flavin re 62.1 14 0.00049 32.6 6.4 63 305-378 5-70 (224)
385 2d8a_A PH0655, probable L-thre 62.0 8.5 0.00029 37.3 5.2 95 298-404 167-267 (348)
386 1rjw_A ADH-HT, alcohol dehydro 61.8 13 0.00045 35.8 6.5 96 296-404 162-261 (339)
387 2eih_A Alcohol dehydrogenase; 61.8 12 0.00041 36.1 6.3 94 297-404 165-265 (343)
388 3m1a_A Putative dehydrogenase; 61.1 25 0.00087 32.4 8.3 72 299-379 5-88 (281)
389 1v3u_A Leukotriene B4 12- hydr 60.3 12 0.00042 35.8 6.0 94 297-404 144-244 (333)
390 2ehd_A Oxidoreductase, oxidore 59.7 59 0.002 28.8 10.3 71 299-379 5-87 (234)
391 1nff_A Putative oxidoreductase 59.6 71 0.0024 29.1 11.0 72 299-379 7-90 (260)
392 3o38_A Short chain dehydrogena 59.4 39 0.0013 30.8 9.2 77 298-379 21-110 (266)
393 4f6c_A AUSA reductase domain p 59.1 55 0.0019 32.2 10.8 106 299-407 69-199 (427)
394 1rjd_A PPM1P, carboxy methyl t 59.0 40 0.0014 32.6 9.5 63 298-362 97-178 (334)
395 1pqw_A Polyketide synthase; ro 58.9 8.5 0.00029 33.7 4.3 94 297-404 37-137 (198)
396 2hcy_A Alcohol dehydrogenase 1 58.3 11 0.00036 36.5 5.2 44 296-340 167-212 (347)
397 1iy8_A Levodione reductase; ox 58.1 1.1E+02 0.0037 27.8 12.3 77 298-378 12-100 (267)
398 1iz0_A Quinone oxidoreductase; 58.0 7.2 0.00025 36.9 3.8 43 296-339 123-167 (302)
399 2h6e_A ADH-4, D-arabinose 1-de 58.0 9.8 0.00033 36.8 4.9 94 298-404 170-269 (344)
400 4b7c_A Probable oxidoreductase 57.9 10 0.00035 36.4 5.0 96 296-404 147-248 (336)
401 3dhn_A NAD-dependent epimerase 57.9 25 0.00085 31.1 7.3 94 300-406 5-113 (227)
402 2qrv_B DNA (cytosine-5)-methyl 57.7 2.6 8.8E-05 39.0 0.5 71 299-395 33-115 (230)
403 3gms_A Putative NADPH:quinone 57.2 7.1 0.00024 37.7 3.7 94 297-404 143-243 (340)
404 2zcu_A Uncharacterized oxidore 57.1 25 0.00084 32.3 7.4 92 305-407 4-106 (286)
405 2aef_A Calcium-gated potassium 56.3 44 0.0015 29.9 8.8 91 299-403 9-104 (234)
406 4eez_A Alcohol dehydrogenase 1 56.3 18 0.00063 34.6 6.6 44 297-340 162-206 (348)
407 2ph3_A 3-oxoacyl-[acyl carrier 56.2 1.1E+02 0.0037 27.1 11.7 73 301-379 3-89 (245)
408 1jvb_A NAD(H)-dependent alcoho 55.9 15 0.00051 35.5 5.8 44 296-340 168-214 (347)
409 2jl1_A Triphenylmethane reduct 55.6 17 0.00059 33.4 6.1 91 305-406 5-108 (287)
410 2g1p_A DNA adenine methylase; 55.6 5.9 0.0002 37.6 2.7 31 351-382 156-186 (278)
411 2c0c_A Zinc binding alcohol de 55.6 16 0.00054 35.6 6.0 95 296-404 161-261 (362)
412 2j3h_A NADP-dependent oxidored 55.6 13 0.00045 35.7 5.3 95 297-404 154-255 (345)
413 4fs3_A Enoyl-[acyl-carrier-pro 55.3 30 0.001 31.8 7.6 77 298-379 5-95 (256)
414 2c29_D Dihydroflavonol 4-reduc 55.1 47 0.0016 31.3 9.2 105 299-407 5-130 (337)
415 1hdo_A Biliverdin IX beta redu 54.8 59 0.002 27.8 9.2 94 300-406 4-112 (206)
416 3lyl_A 3-oxoacyl-(acyl-carrier 54.8 60 0.0021 29.0 9.5 75 299-379 5-91 (247)
417 3b5i_A S-adenosyl-L-methionine 54.4 13 0.00045 36.9 5.1 47 272-318 18-72 (374)
418 1x1t_A D(-)-3-hydroxybutyrate 54.3 48 0.0016 30.2 8.8 76 299-379 4-92 (260)
419 3qwb_A Probable quinone oxidor 54.1 15 0.00052 35.2 5.5 94 297-404 147-247 (334)
420 3rku_A Oxidoreductase YMR226C; 53.9 54 0.0018 30.6 9.2 79 298-379 32-124 (287)
421 3ucx_A Short chain dehydrogena 53.6 72 0.0025 29.1 10.0 75 298-378 10-96 (264)
422 2z1n_A Dehydrogenase; reductas 53.0 1.3E+02 0.0044 27.1 12.2 76 299-379 7-94 (260)
423 1piw_A Hypothetical zinc-type 52.8 9.6 0.00033 37.1 3.8 44 296-340 177-221 (360)
424 2dq4_A L-threonine 3-dehydroge 52.6 7.3 0.00025 37.7 2.9 94 298-404 164-262 (343)
425 3jyn_A Quinone oxidoreductase; 52.5 14 0.00048 35.3 4.9 94 297-404 139-239 (325)
426 4eye_A Probable oxidoreductase 52.1 13 0.00043 36.0 4.5 93 297-404 158-257 (342)
427 2b4q_A Rhamnolipids biosynthes 51.7 1.1E+02 0.0039 28.0 11.1 75 298-379 28-114 (276)
428 1h2b_A Alcohol dehydrogenase; 51.7 17 0.00059 35.2 5.5 43 296-339 184-228 (359)
429 3goh_A Alcohol dehydrogenase, 51.6 9.3 0.00032 36.4 3.4 42 297-340 141-183 (315)
430 4dry_A 3-oxoacyl-[acyl-carrier 51.1 35 0.0012 31.7 7.4 77 298-379 32-120 (281)
431 3grp_A 3-oxoacyl-(acyl carrier 50.9 1E+02 0.0035 28.2 10.6 73 298-379 26-110 (266)
432 3e48_A Putative nucleoside-dip 50.7 16 0.00056 33.7 5.0 90 305-405 5-106 (289)
433 3ic5_A Putative saccharopine d 50.7 63 0.0022 24.7 8.0 83 299-394 5-92 (118)
434 3rih_A Short chain dehydrogena 50.6 35 0.0012 32.1 7.4 77 298-379 40-128 (293)
435 3eod_A Protein HNR; response r 50.3 59 0.002 25.3 7.8 76 322-404 7-86 (130)
436 1yb5_A Quinone oxidoreductase; 49.6 23 0.0008 34.2 6.1 94 297-404 169-269 (351)
437 1yf3_A DNA adenine methylase; 49.4 20 0.00068 33.5 5.3 51 351-404 148-210 (259)
438 3pk0_A Short-chain dehydrogena 48.5 63 0.0021 29.5 8.6 76 298-378 9-96 (262)
439 4egb_A DTDP-glucose 4,6-dehydr 48.4 23 0.0008 33.6 5.8 102 298-405 23-149 (346)
440 3qiv_A Short-chain dehydrogena 48.1 77 0.0026 28.4 9.1 76 298-379 8-95 (253)
441 4dup_A Quinone oxidoreductase; 47.7 22 0.00075 34.4 5.5 94 297-404 166-265 (353)
442 2rh8_A Anthocyanidin reductase 47.6 51 0.0017 31.0 8.1 101 299-406 9-132 (338)
443 2q2v_A Beta-D-hydroxybutyrate 47.4 70 0.0024 28.9 8.8 72 299-378 4-87 (255)
444 4g81_D Putative hexonate dehyd 47.4 44 0.0015 31.0 7.3 75 298-378 8-94 (255)
445 2zb4_A Prostaglandin reductase 47.1 24 0.00082 34.1 5.7 97 296-404 156-260 (357)
446 4f6l_B AUSA reductase domain p 47.0 75 0.0026 32.1 9.7 105 300-407 151-280 (508)
447 3ctm_A Carbonyl reductase; alc 46.8 75 0.0026 29.0 9.0 75 298-378 33-119 (279)
448 3f6c_A Positive transcription 46.8 79 0.0027 24.6 8.1 77 324-404 3-81 (134)
449 1ek6_A UDP-galactose 4-epimera 46.5 71 0.0024 30.1 9.0 97 300-406 3-133 (348)
450 2pzm_A Putative nucleotide sug 46.2 20 0.00067 34.0 4.8 98 298-406 19-137 (330)
451 1qor_A Quinone oxidoreductase; 46.0 20 0.00069 34.1 4.9 94 297-404 139-239 (327)
452 2j8z_A Quinone oxidoreductase; 45.9 25 0.00084 34.1 5.6 94 297-404 161-261 (354)
453 2b5w_A Glucose dehydrogenase; 45.7 20 0.00067 34.8 4.8 94 300-404 174-273 (357)
454 3snk_A Response regulator CHEY 45.6 67 0.0023 25.3 7.5 76 323-404 15-94 (135)
455 1wly_A CAAR, 2-haloacrylate re 45.4 29 0.001 33.0 6.0 43 297-340 144-188 (333)
456 1rkx_A CDP-glucose-4,6-dehydra 45.3 26 0.00089 33.5 5.6 101 299-406 9-133 (357)
457 3gaf_A 7-alpha-hydroxysteroid 45.3 82 0.0028 28.5 8.9 76 298-379 11-98 (256)
458 1hdc_A 3-alpha, 20 beta-hydrox 44.9 1.4E+02 0.0047 26.9 10.4 72 299-379 5-88 (254)
459 3tr9_A Dihydropteroate synthas 44.7 12 0.0004 36.3 2.8 43 265-309 30-72 (314)
460 4fgs_A Probable dehydrogenase 44.4 61 0.0021 30.4 7.9 72 298-378 28-111 (273)
461 4e7p_A Response regulator; DNA 44.0 1.2E+02 0.0042 24.2 9.5 78 323-404 21-101 (150)
462 1mxh_A Pteridine reductase 2; 44.0 89 0.003 28.5 9.0 75 299-378 11-102 (276)
463 3lf2_A Short chain oxidoreduct 43.8 88 0.003 28.4 8.9 78 298-379 7-96 (265)
464 3f9i_A 3-oxoacyl-[acyl-carrier 43.7 85 0.0029 28.0 8.7 73 298-379 13-93 (249)
465 3awd_A GOX2181, putative polyo 43.5 88 0.003 28.0 8.8 75 298-378 12-98 (260)
466 3eqz_A Response regulator; str 43.5 1.1E+02 0.0037 23.7 8.4 77 323-404 4-81 (135)
467 3imf_A Short chain dehydrogena 43.4 75 0.0026 28.8 8.3 75 299-379 6-92 (257)
468 3slg_A PBGP3 protein; structur 43.3 20 0.0007 34.5 4.5 95 299-405 24-141 (372)
469 2nwq_A Probable short-chain de 43.2 2E+02 0.0067 26.3 12.4 73 300-379 22-106 (272)
470 3v8b_A Putative dehydrogenase, 43.2 97 0.0033 28.6 9.2 76 298-379 27-114 (283)
471 3t8y_A CHEB, chemotaxis respon 43.1 92 0.0031 25.7 8.2 78 323-404 26-105 (164)
472 3rkr_A Short chain oxidoreduct 42.7 85 0.0029 28.5 8.6 76 298-379 28-115 (262)
473 3fbg_A Putative arginate lyase 42.2 31 0.0011 33.2 5.6 42 298-340 150-193 (346)
474 1jw9_B Molybdopterin biosynthe 41.8 20 0.00068 33.1 4.0 76 299-377 31-128 (249)
475 3t7c_A Carveol dehydrogenase; 41.4 1.1E+02 0.0038 28.4 9.3 75 298-378 27-125 (299)
476 4dqv_A Probable peptide synthe 41.3 78 0.0027 31.8 8.7 106 298-405 72-214 (478)
477 2uyo_A Hypothetical protein ML 41.3 88 0.003 29.8 8.6 61 300-362 104-164 (310)
478 3rqi_A Response regulator prot 41.1 84 0.0029 26.5 7.8 75 323-404 8-86 (184)
479 1xu9_A Corticosteroid 11-beta- 41.1 75 0.0026 29.2 8.0 75 298-377 27-113 (286)
480 4egf_A L-xylulose reductase; s 41.1 68 0.0023 29.3 7.6 77 298-379 19-107 (266)
481 3eul_A Possible nitrate/nitrit 40.9 84 0.0029 25.3 7.5 80 322-404 15-96 (152)
482 3sju_A Keto reductase; short-c 40.6 1.1E+02 0.0038 28.1 9.1 76 298-379 23-110 (279)
483 2bka_A CC3, TAT-interacting pr 40.5 38 0.0013 30.1 5.6 97 299-407 18-134 (242)
484 3gaz_A Alcohol dehydrogenase s 40.1 34 0.0012 32.8 5.5 91 297-404 149-246 (343)
485 1i24_A Sulfolipid biosynthesis 40.0 1.2E+02 0.004 29.2 9.6 75 298-378 10-108 (404)
486 2pv0_B DNA (cytosine-5)-methyl 39.6 33 0.0011 34.0 5.3 71 299-395 189-271 (386)
487 3oid_A Enoyl-[acyl-carrier-pro 39.2 1.2E+02 0.0041 27.4 9.0 74 299-378 4-90 (258)
488 2cf5_A Atccad5, CAD, cinnamyl 39.2 24 0.00082 34.2 4.3 41 298-339 180-221 (357)
489 3hzh_A Chemotaxis response reg 39.1 1.3E+02 0.0044 24.4 8.4 77 324-404 38-118 (157)
490 4f3n_A Uncharacterized ACR, CO 38.9 34 0.0012 34.5 5.4 45 299-343 138-187 (432)
491 1xgk_A Nitrogen metabolite rep 38.8 66 0.0023 30.9 7.4 99 299-406 5-114 (352)
492 3heb_A Response regulator rece 38.3 1.5E+02 0.0052 23.6 9.6 79 323-404 5-96 (152)
493 4g65_A TRK system potassium up 38.2 39 0.0014 34.2 5.8 62 306-376 8-74 (461)
494 1lnq_A MTHK channels, potassiu 38.1 39 0.0013 32.3 5.6 90 300-402 116-209 (336)
495 3sx2_A Putative 3-ketoacyl-(ac 38.0 1.2E+02 0.004 27.7 8.8 76 298-379 12-111 (278)
496 3pxx_A Carveol dehydrogenase; 37.9 1.4E+02 0.0047 27.2 9.3 76 298-379 9-108 (287)
497 3pgx_A Carveol dehydrogenase; 37.5 1.4E+02 0.0049 27.2 9.3 76 298-379 14-114 (280)
498 1gy8_A UDP-galactose 4-epimera 37.5 2E+02 0.0069 27.4 10.9 104 300-406 3-145 (397)
499 1wma_A Carbonyl reductase [NAD 37.2 1.1E+02 0.0039 27.3 8.5 74 299-378 4-90 (276)
500 3kht_A Response regulator; PSI 37.1 1.5E+02 0.0052 23.3 9.6 79 323-404 6-88 (144)
No 1
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=100.00 E-value=1.6e-56 Score=463.47 Aligned_cols=342 Identities=23% Similarity=0.308 Sum_probs=271.9
Q ss_pred CCCCCccCCCCCCCcCccCccCccCCchHHHHHHHHHHHhcC-CCceecccCCCccceeeeeEEeeecCCCceEEEeecC
Q 044572 45 LPSLTCALQCPHFQSCSGCTHEFNLHRPIIVDEATDFFKSIG-LLDFTFDSCRLYGWRCRAKLAVRGTSTSPLIGLYQEG 123 (457)
Q Consensus 45 ~~~~Rv~p~C~~f~~CGGC~lqh~~~~~~~~~~~~~~l~r~g-~~~~~~~s~~~~~YRnR~~l~v~~~~g~~~vGf~~~~ 123 (457)
.||+|++|+|+||+.||||+||| +.|+.|++.-+++|+|++ +....+.++.+||||||++|+++. |+ +|||+++
T Consensus 72 ~S~~Rv~p~C~~~~~CGGC~lqh-~~y~~Ql~~K~~~l~r~~~~~~~~~~s~~~~~YRnk~~~~v~~--g~--~Gf~~~~ 146 (425)
T 2jjq_A 72 SSPLRVGPRCKAFGKCGGCTLQH-LNYDYQLEFKRKKLKRILGFEVEVVPSPKIFGHRNRIDLAITK--DG--IGFRERG 146 (425)
T ss_dssp CCTTBCC-----------CTTTT-BCHHHHHHHHHHHHHHHHSSCCEEECCSCSSSCBCEEEEEEET--TE--EEEEC--
T ss_pred CCccccCCCCCCcCCCCCccCcC-CCHHHHHHHHHHHHHHccCCCCceecCCCcCCccceEEEEecC--CC--eEEeeCC
Confidence 67899999999999999999999 666555433223777764 321234688999999999999975 33 9999999
Q ss_pred c-cceEeCCCCccCChhHHHHHHHHHHHHHhcCCCCcccCCCCCceeEEEEEEEeccCCCCccccccCCcEEEEEEeCCC
Q 044572 124 T-HNVVDIPHCKAHHPRINAAVELLRQGIKELNVEPYDEDDRTGDLRYVQMAVTTYNTSLPASERYRNGKVQITLVWNSR 202 (457)
Q Consensus 124 s-~~iv~i~~C~i~~p~i~~~l~~l~~~l~~~~~~~y~~~~~~G~lr~l~l~vr~~~~~~~~~~~~~~~~v~v~lv~~~~ 202 (457)
| |+||++++|++++|.+++++..++++++.+++++|++.++.|.||++.++.. ..+|++|+.+++.+.
T Consensus 147 s~~~iv~i~~C~i~~~~~~~~~~~l~~~~~~~~~~~y~~~~~~g~lr~~~vr~~-----------~~~g~~~v~l~~~~~ 215 (425)
T 2jjq_A 147 KWWKIVDIDECPVFGKTSREAIERLKEFIEEEKISVWNIKKDEGFLRYMVLREG-----------KFTEEVMVNFVTKEG 215 (425)
T ss_dssp CTTSEEECSCBTTTBHHHHHHHHHHHHHHHHHTCCBBBTTTTBCSEEEEEEEEC-----------TTTCCEEEEEEESSS
T ss_pred CCCcEEECcCCccCCHHHHHHHHHHHHHHHHcCCCccccccCCCcceEEEEEEc-----------cCCCCEEEEEEeCch
Confidence 9 9999999999999999999999999999999999999999999999865432 147899999888654
Q ss_pred CCCCCCchhHHHHHHHHHHcCCCCCCCceeEEEEEEeecCCCCcccCCeEEEeeccCeEEEeeeeEEEEECCCCCCCCCH
Q 044572 203 NEKSPNSDKLESLAEFLWRNGGSRSREHYIHSVWANFQTSTNNVIFGNRWRHLLGETDFWENVGGIDISLAPSSFGQANT 282 (457)
Q Consensus 203 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~si~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~g~~~~i~~~~FfQ~n~ 282 (457)
. .+. + + ..+.+.++|+++++...+.+.+ +..+++|+.++.++++|++|.+++++|||+|+
T Consensus 216 -~----~~~---l-~----------~~~~~~~i~~~~~~~~~~~~~g-~~~~l~G~~~i~e~~~g~~f~~~~~~F~q~n~ 275 (425)
T 2jjq_A 216 -N----LPD---P-T----------NYFDFDSIYWSVNRSKSDVSYG-DIERFWGKEFIRERLDDVDYLIHPNSFFQTNS 275 (425)
T ss_dssp -C----CCC---C-T----------TTCCCSEEEEEECCSSSCCSCC-EEEEEEECSCEEEEETTEEEEECTTSCCCSBH
T ss_pred -h----HHH---H-h----------hcCCeeEEEEEcCCCCCceecc-eEEEEECCCeEEEEECCEEEEEccccccccCH
Confidence 1 111 1 0 2456788999888887788888 88999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCc
Q 044572 283 RAFDILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSI 362 (457)
Q Consensus 283 ~~~~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~ 362 (457)
.+++.|++++.+ +.++.+|||+|||+|.+++.+|+. +.+|+|||+|++|++.|++|++.+ +.+ ++|+++|+.+
T Consensus 276 ~~~e~l~~~~~~-~~~~~~VLDlgcG~G~~sl~la~~--~~~V~gvD~s~~ai~~A~~n~~~n---gl~-v~~~~~d~~~ 348 (425)
T 2jjq_A 276 YQAVNLVRKVSE-LVEGEKILDMYSGVGTFGIYLAKR--GFNVKGFDSNEFAIEMARRNVEIN---NVD-AEFEVASDRE 348 (425)
T ss_dssp HHHHHHHHHHHH-HCCSSEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHH---TCC-EEEEECCTTT
T ss_pred HHHHHHHHHhhc-cCCCCEEEEeeccchHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHc---CCc-EEEEECChHH
Confidence 999999999988 567899999999999999999975 459999999999999999999873 334 9999999988
Q ss_pred CcccccCCccEEEECCCCCCccHHHHHHHHhcCCCCcEEEEeccCCCCCchhchhhHHHHHHHhccccccccCCCCCCCC
Q 044572 363 EPLSWLVGSDVLVVDPPRKGLDSSLVHALQSIGSAERKAKSLSESSSSMVKEEKRPWILRAKEASVQIGSKTNSENQSLP 442 (457)
Q Consensus 363 ~~~~~~~~~D~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 442 (457)
.+.. .||+|++||||.|+...+++.+..++ +++++|+| |++.+..+++..+. +.-......+.+|
T Consensus 349 ~~~~---~fD~Vv~dPPr~g~~~~~~~~l~~l~-p~givyvs-----c~p~tlarDl~~l~------y~l~~~~~~DmFP 413 (425)
T 2jjq_A 349 VSVK---GFDTVIVDPPRAGLHPRLVKRLNREK-PGVIVYVS-----CNPETFARDVKMLD------YRIDEIVALDMFP 413 (425)
T ss_dssp CCCT---TCSEEEECCCTTCSCHHHHHHHHHHC-CSEEEEEE-----SCHHHHHHHHHHSS------CCEEEEEEECCST
T ss_pred cCcc---CCCEEEEcCCccchHHHHHHHHHhcC-CCcEEEEE-----CChHHHHhHHhhCe------EEEEEEEEECcCC
Confidence 6532 79999999999999999999999886 89999999 99999988877663 2222222446777
Q ss_pred Cc
Q 044572 443 QT 444 (457)
Q Consensus 443 ~~ 444 (457)
+|
T Consensus 414 ~T 415 (425)
T 2jjq_A 414 HT 415 (425)
T ss_dssp TS
T ss_pred CC
Confidence 76
No 2
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=100.00 E-value=3.5e-49 Score=410.39 Aligned_cols=320 Identities=18% Similarity=0.278 Sum_probs=248.1
Q ss_pred CCCCCccCCCCCCCcCccCccCccCCchHHH----HHHHHHHHhcCCCceecccCCCccceeeeeEEeee--cCCCceEE
Q 044572 45 LPSLTCALQCPHFQSCSGCTHEFNLHRPIIV----DEATDFFKSIGLLDFTFDSCRLYGWRCRAKLAVRG--TSTSPLIG 118 (457)
Q Consensus 45 ~~~~Rv~p~C~~f~~CGGC~lqh~~~~~~~~----~~~~~~l~r~g~~~~~~~s~~~~~YRnR~~l~v~~--~~g~~~vG 118 (457)
.||+|++|+|+||+.||||+||| +.|+.|+ +.+.++|+++ + +...++.+||||||++|+++. .+|+..+|
T Consensus 72 ~S~~Rv~p~C~~~~~CGGC~~qh-~~y~~Ql~~K~~~v~~~l~~~-~--~~~~~~~~~~YRnr~~~~~~~~~~~~~~~~G 147 (433)
T 1uwv_A 72 DSPERETPRCPHFGVCGGCQQQH-ASVDLQQRSKSAALARLMKHD-V--SEVIADVPWGYRRRARLSLNYLPKTQQLQMG 147 (433)
T ss_dssp CCTTBCCCSCTTTTTBTTCSCTT-BCHHHHHHHHHHHHHHHHTSC-C--CEEECCCSSSCBSEEEEEEEEETTTTEEEEE
T ss_pred CCCCcCCCCCCCCCCCCCccccC-CCHHHHHHHHHHHHHHHHHHh-h--cccccCCccccCceEEEeeeEccCCCcEEEE
Confidence 67899999999999999999999 5554443 4588899887 3 222356799999999999984 45677899
Q ss_pred EeecCccceEeCCCCccCChhHHHHHHHHHHHHHhcCCCCcccCCCCCceeEEEEEEEeccCCCCccccccCCcEEEEEE
Q 044572 119 LYQEGTHNVVDIPHCKAHHPRINAAVELLRQGIKELNVEPYDEDDRTGDLRYVQMAVTTYNTSLPASERYRNGKVQITLV 198 (457)
Q Consensus 119 f~~~~s~~iv~i~~C~i~~p~i~~~l~~l~~~l~~~~~~~y~~~~~~G~lr~l~l~vr~~~~~~~~~~~~~~~~v~v~lv 198 (457)
||+++||+||+|++|++++|.+++++..++++++..++ .|.++++.++.. .++..+++.
T Consensus 148 f~~~~s~~iv~i~~C~i~~~~~~~~~~~l~~~~~~~~~--------~~~~~~i~~~~~------------~~~~~l~~~- 206 (433)
T 1uwv_A 148 FRKAGSSDIVDVKQCPILAPQLEALLPKVRACLGSLQA--------MRHLGHVELVQA------------TSGTLMILR- 206 (433)
T ss_dssp EEBTTSSCEEECSCCTTBCHHHHHHHHHHHHHHTTCGG--------GGGEEEEEEEEE------------TTEEEEEEE-
T ss_pred EEcCCCCcEEECccCcCCCHHHHHHHHHHHHHHHhcCC--------CCCccEEEEEEe------------CCCcEEEEE-
Confidence 99999999999999999999999999999999876543 366888755432 234443322
Q ss_pred eCCCCCCCCCchhHHHHHHHHHHcCCCCCCCceeEEEEEEeecCCCCcccCCeEEEeeccCeEEEeeeeEEEEECCCCCC
Q 044572 199 WNSRNEKSPNSDKLESLAEFLWRNGGSRSREHYIHSVWANFQTSTNNVIFGNRWRHLLGETDFWENVGGIDISLAPSSFG 278 (457)
Q Consensus 199 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~si~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~g~~~~i~~~~Ff 278 (457)
...... .+..+.+.+ +.... . .++|. +.. +....+++|...+++ ++|++|.+++++||
T Consensus 207 -~~~~l~---~~~~~~~~~-~~~~~-------~-~~~~~--~~~------~~~~~~l~g~~~~~~-~~g~~~~~~~~~f~ 264 (433)
T 1uwv_A 207 -HTAPLS---SADREKLER-FSHSE-------G-LDLYL--APD------SEILETVSGEMPWYD-SNGLRLTFSPRDFI 264 (433)
T ss_dssp -ESSCCC---HHHHHHHHH-HHHHH-------T-CEEEE--ESS------SSCCEEEECCCCEEE-ETTEEEECCSSSCC
T ss_pred -ecCCCC---HHHHHHHHH-Hhhcc-------c-EEEEE--ECC------CCeEEEEeCCCcEEE-ECCEEEEECccccc
Confidence 222221 112222222 22110 1 24444 211 123467889887776 88999999999999
Q ss_pred CCCHHHHHHHHHHHHhhCC--CCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEE
Q 044572 279 QANTRAFDILLRKLQKYVP--YGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWH 356 (457)
Q Consensus 279 Q~n~~~~~~l~~~i~~~~~--~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~ 356 (457)
|+|+.+++.+++.+.+++. ++.+|||+|||+|.+++.+|.. ..+|+|||+|++|++.|++|++.+ +..|++|+
T Consensus 265 q~n~~~~e~l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~--~~~V~gvD~s~~al~~A~~n~~~~---~~~~v~f~ 339 (433)
T 1uwv_A 265 QVNAGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQ--AASVVGVEGVPALVEKGQQNARLN---GLQNVTFY 339 (433)
T ss_dssp CSBHHHHHHHHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHT---TCCSEEEE
T ss_pred ccCHHHHHHHHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhh--CCEEEEEeCCHHHHHHHHHHHHHc---CCCceEEE
Confidence 9999999999999988764 5789999999999999999976 569999999999999999999883 34689999
Q ss_pred EccCCcCccc--c-cCCccEEEECCCCCCccHHHHHHHHhcCCCCcEEEEeccCCCCCchhchhhHHHHH
Q 044572 357 NADNSIEPLS--W-LVGSDVLVVDPPRKGLDSSLVHALQSIGSAERKAKSLSESSSSMVKEEKRPWILRA 423 (457)
Q Consensus 357 ~~d~~~~~~~--~-~~~~D~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs~~~~~c~~~~~~~~~~~~~ 423 (457)
++|+.+.+.. + ...||+|++||||.|+. ++++.+..++ +++++|+| |++.+..++...+.
T Consensus 340 ~~d~~~~l~~~~~~~~~fD~Vv~dPPr~g~~-~~~~~l~~~~-p~~ivyvs-----c~p~tlard~~~l~ 402 (433)
T 1uwv_A 340 HENLEEDVTKQPWAKNGFDKVLLDPARAGAA-GVMQQIIKLE-PIRIVYVS-----CNPATLARDSEALL 402 (433)
T ss_dssp ECCTTSCCSSSGGGTTCCSEEEECCCTTCCH-HHHHHHHHHC-CSEEEEEE-----SCHHHHHHHHHHHH
T ss_pred ECCHHHHhhhhhhhcCCCCEEEECCCCccHH-HHHHHHHhcC-CCeEEEEE-----CChHHHHhhHHHHH
Confidence 9999885433 1 24799999999999997 6888898886 89999999 99999998876554
No 3
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=100.00 E-value=1.9e-44 Score=367.36 Aligned_cols=331 Identities=15% Similarity=0.119 Sum_probs=242.9
Q ss_pred cCccCccCc-cCCchHHH--HHHHHHHHhcCCCceecccCCCccceeeeeEEeeecCCCceEEEeecCccceEeCCCCcc
Q 044572 59 SCSGCTHEF-NLHRPIIV--DEATDFFKSIGLLDFTFDSCRLYGWRCRAKLAVRGTSTSPLIGLYQEGTHNVVDIPHCKA 135 (457)
Q Consensus 59 ~CGGC~lqh-~~~~~~~~--~~~~~~l~r~g~~~~~~~s~~~~~YRnR~~l~v~~~~g~~~vGf~~~~s~~iv~i~~C~i 135 (457)
.||||+||| .|+.|+.. +.+.++|+|+|..+.++.++.+|+||||++|+++..++...+|||.++||.+|+|++|++
T Consensus 3 gC~gc~~~~~~y~~Ql~~K~~~v~~~l~r~~~~~~~~~~~~~~~yRnr~~~~v~~~~~~~~~G~~~~~s~~iv~i~~C~i 82 (369)
T 3bt7_A 3 HMTPEHLPTEQYEAQLAEKVVRLQSMMAPFSDLVPEVFRSPVSHYRMRAEFRIWHDGDDLYHIIFDQQTKSRIRVDSFPA 82 (369)
T ss_dssp CCCCSSCCGGGHHHHHHHHHHHHHHHHTTTCCCCCEEECCCSSSCBSEEEEEEEEETTEEEEEEECTTTCCEEECSCCTT
T ss_pred CCCccccCCCCHHHHHHHHHHHHHHHHHhcCCCCCCccCCCccccceEEEEEEEEcCCcEEEEEEECCCCCEEeCcCCcc
Confidence 599999999 34444432 458899999885433455667899999999999865566789999999999999999999
Q ss_pred CChhHHHHHHHHHHHHHhcCCCCcccCCCCCceeEEEEEEEeccCCCCccccccCCcEEEEEEeCCCCCCCCCchhHHHH
Q 044572 136 HHPRINAAVELLRQGIKELNVEPYDEDDRTGDLRYVQMAVTTYNTSLPASERYRNGKVQITLVWNSRNEKSPNSDKLESL 215 (457)
Q Consensus 136 ~~p~i~~~l~~l~~~l~~~~~~~y~~~~~~G~lr~l~l~vr~~~~~~~~~~~~~~~~v~v~lv~~~~~~~~~~~~~~~~l 215 (457)
++|.+++++..++++++..+. ..+ .+.++ .+.. ..+|++|++++++.. . . ...+.+
T Consensus 83 ~~~~i~~~l~~l~~~~~~~~~-----~r~--~~~~~--~~~~----------~~~g~~~v~~~~~~~-~---~-~~~~~~ 138 (369)
T 3bt7_A 83 ASELINQLMTAMIAGVRNNPV-----LRH--KLFQI--DYLT----------TLSNQAVVSLLYHKK-L---D-DEWRQE 138 (369)
T ss_dssp BCHHHHHHHHHHHHHHTTCHH-----HHT--TEEEE--EEEE----------CTTCEEEEEEEESSC-C---C-HHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhCcc-----ccc--eeEEE--EEEe----------cCCCcEEEEEEECCC-C---C-HHHHHH
Confidence 999999999999988754310 000 12222 2221 145789998887543 1 1 122333
Q ss_pred HHHHHHcCCCCCCCcee-EEEEEEeecCCCCcccCCeEEEeeccCeEEEee--ee--EEEEECCCCCCCCCHHHHHHHHH
Q 044572 216 AEFLWRNGGSRSREHYI-HSVWANFQTSTNNVIFGNRWRHLLGETDFWENV--GG--IDISLAPSSFGQANTRAFDILLR 290 (457)
Q Consensus 216 ~~~l~~~~~~~~~~~~i-~si~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~--~g--~~~~i~~~~FfQ~n~~~~~~l~~ 290 (457)
.+.+..... .. .+ ..++ +. ..+..+++|+.++.+++ +| +.|.+++++|||+|+.+++.|+.
T Consensus 139 ~~~l~~~~~---~~-~i~~~~~---~~-------~~~~~~~~G~~~i~e~~~~~g~~~~~~~~~~~F~Q~n~~~~~~l~~ 204 (369)
T 3bt7_A 139 AEALRDALR---AQ-NLNVHLI---GR-------ATKTKIELDQDYIDERLPVAGKEMIYRQVENSFTQPNAAMNIQMLE 204 (369)
T ss_dssp HHHHHHHHH---TT-TCEEEEE---EE-------ETTEEEESSCSEEEEECCBTTBCCEEEEETTSCCCSBHHHHHHHHH
T ss_pred HHHHHHhCc---CC-eeEEEEE---eC-------CCceEEEcCCCEEEEEeccCCceEEEEECCCCeecCCHHHHHHHHH
Confidence 333322100 00 11 1111 11 12356789999888877 67 88999999999999999999999
Q ss_pred HHHhhCC-CCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCccccc-
Q 044572 291 KLQKYVP-YGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWL- 368 (457)
Q Consensus 291 ~i~~~~~-~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~- 368 (457)
++.+++. .+.+|||+|||+|+|++.+|+. +.+|+|||++++|++.|++|++.+ +.+|++|+++|+++.+..+.
T Consensus 205 ~~~~~~~~~~~~vLDl~cG~G~~~l~la~~--~~~V~gvd~~~~ai~~a~~n~~~n---g~~~v~~~~~d~~~~~~~~~~ 279 (369)
T 3bt7_A 205 WALDVTKGSKGDLLELYCGNGNFSLALARN--FDRVLATEIAKPSVAAAQYNIAAN---HIDNVQIIRMAAEEFTQAMNG 279 (369)
T ss_dssp HHHHHTTTCCSEEEEESCTTSHHHHHHGGG--SSEEEEECCCHHHHHHHHHHHHHT---TCCSEEEECCCSHHHHHHHSS
T ss_pred HHHHHhhcCCCEEEEccCCCCHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHc---CCCceEEEECCHHHHHHHHhh
Confidence 9999875 4688999999999999999974 569999999999999999999984 34689999999987643322
Q ss_pred --------------CCccEEEECCCCCCccHHHHHHHHhcCCCCcEEEEeccCCCCCchhchhhHHHHHHHhcccccccc
Q 044572 369 --------------VGSDVLVVDPPRKGLDSSLVHALQSIGSAERKAKSLSESSSSMVKEEKRPWILRAKEASVQIGSKT 434 (457)
Q Consensus 369 --------------~~~D~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~ 434 (457)
..||+||+||||.|+..++++.+. ++++++|+| |++.+..+++..+.. . +.-..
T Consensus 280 ~~~~~~l~~~~~~~~~fD~Vv~dPPr~g~~~~~~~~l~---~~g~ivyvs-----c~p~t~ard~~~l~~--~--y~~~~ 347 (369)
T 3bt7_A 280 VREFNRLQGIDLKSYQCETIFVDPPRSGLDSETEKMVQ---AYPRILYIS-----CNPETLCKNLETLSQ--T--HKVER 347 (369)
T ss_dssp CCCCTTGGGSCGGGCCEEEEEECCCTTCCCHHHHHHHT---TSSEEEEEE-----SCHHHHHHHHHHHHH--H--EEEEE
T ss_pred ccccccccccccccCCCCEEEECcCccccHHHHHHHHh---CCCEEEEEE-----CCHHHHHHHHHHHhh--C--cEEEE
Confidence 269999999999999988888775 589999999 999999999887753 1 21111
Q ss_pred CCCCCCCCCc
Q 044572 435 NSENQSLPQT 444 (457)
Q Consensus 435 ~~~~~~~p~~ 444 (457)
....+.+|+|
T Consensus 348 ~~~~D~FP~T 357 (369)
T 3bt7_A 348 LALFDQFPYT 357 (369)
T ss_dssp EEEECCSTTS
T ss_pred EEeeccCCCC
Confidence 2234567765
No 4
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.97 E-value=9.2e-31 Score=267.80 Aligned_cols=318 Identities=10% Similarity=0.004 Sum_probs=219.5
Q ss_pred cccCCCccceeeeeE--Eee------ecCCC-ceEEEeecCc---cceEeCCCCccCChhH----HHHHHHHHHHHHhcC
Q 044572 92 FDSCRLYGWRCRAKL--AVR------GTSTS-PLIGLYQEGT---HNVVDIPHCKAHHPRI----NAAVELLRQGIKELN 155 (457)
Q Consensus 92 ~~s~~~~~YRnR~~l--~v~------~~~g~-~~vGf~~~~s---~~iv~i~~C~i~~p~i----~~~l~~l~~~l~~~~ 155 (457)
+.++.+|.|||++++ ..+ ..+|+ +..|||.++| ++|++.++|++..+.+ ++++...++++.+.+
T Consensus 14 ~~~~~pw~y~n~~~~~~~~g~~v~v~~~~g~~l~~g~~~~~s~i~~ri~~~~~~~i~~~~~~~~~~~a~~~r~~~~~~~~ 93 (385)
T 2b78_A 14 LKRGVQLLSSRDYPNLNLDNQVVQLYSDADIFLGTAYLSKQNKGVGWLISPKKVSLNVTYFIKLFQWSKDKRKNFAHSKL 93 (385)
T ss_dssp HHHTCCEEEGGGSTTCCCCSEEEEEECTTCCEEEEEEEEEETTEEEEEEESSCCCCCHHHHHHHHHHHHHTTHHHHHCSS
T ss_pred HhcCCCeEEHHHhCCCCCCCCEEEEEcCCCCEEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHhcCCC
Confidence 346778999999988 433 23444 6789999999 6899999999988754 444444477887677
Q ss_pred CCCcccCCCCC-ceeEEEEEEEeccCCCCccccccCCcEEEEEEeCCCCCCCCCchhHHHHHHHHHHcCCCCCCCceeEE
Q 044572 156 VEPYDEDDRTG-DLRYVQMAVTTYNTSLPASERYRNGKVQITLVWNSRNEKSPNSDKLESLAEFLWRNGGSRSREHYIHS 234 (457)
Q Consensus 156 ~~~y~~~~~~G-~lr~l~l~vr~~~~~~~~~~~~~~~~v~v~lv~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~s 234 (457)
...|+...+.| .|+++.+. ..|+++++.+.+... ....+.+.+.|... .+.+.+
T Consensus 94 ~~~yr~~~~egd~l~gl~vd--------------~~g~~~vv~~~~~~~-----~~~~~~i~~~l~~~------~~~~~~ 148 (385)
T 2b78_A 94 TTAYRLFNQDGDSFGGVTID--------------CYGDFVLFSWYNSFV-----YQIRDEIVAAFRQV------YPNFLG 148 (385)
T ss_dssp CCEEEEEEGGGGTCTTEEEE--------------EETTEEEEEECSHHH-----HHTHHHHHHHHHHH------STTCSE
T ss_pred CceEEEEeCCCCCCCceEEE--------------EECCEEEEEECcHHH-----HHhHHHHHHHHHHH------hCCCCE
Confidence 88999888887 58886443 236776665543210 11234555555432 334578
Q ss_pred EEEEeecCCCCcccCCeEEEeeccC---eEEEeeeeEEEEECCC-----CCCCCCHHHHHHHHHHHHhhCCCCCeEEEEc
Q 044572 235 VWANFQTSTNNVIFGNRWRHLLGET---DFWENVGGIDISLAPS-----SFGQANTRAFDILLRKLQKYVPYGASVTDLY 306 (457)
Q Consensus 235 i~~~~~~~~~~~~~~~~~~~l~G~~---~~~~~~~g~~~~i~~~-----~FfQ~n~~~~~~l~~~i~~~~~~~~~vLDl~ 306 (457)
|+.+++...+ +....+++|+. .+....+|++|.+++. +|| .|...++.++.. ++.++++|||+|
T Consensus 149 i~~~~~~~~~----~~~~~~l~G~~~~~~~~v~e~g~~f~v~~~~~~~t~ff-~~~~~~~~~~~~---~~~~~~~VLDl~ 220 (385)
T 2b78_A 149 AYEKIRFKGI----DNVSAHLYGQEAPEQFLILENGISYNVFLNDGLMTGIF-LDQRQVRNELIN---GSAAGKTVLNLF 220 (385)
T ss_dssp EEEEECC--------CCEEEEEESCCCSSEEEEETTEEEEECSSSSSCCSSC-GGGHHHHHHHHH---TTTBTCEEEEET
T ss_pred EEEechhhcC----CccceeecCCCCCceEEEEECCEEEEEeccccccCCcC-CcHHHHHHHHHH---HhcCCCeEEEEe
Confidence 8887665432 55678899985 5644559999999998 999 777777777654 324688999999
Q ss_pred ccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCC-cEEEEEccCCcCcccc---cCCccEEEECCCCCC
Q 044572 307 AGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDG-NISWHNADNSIEPLSW---LVGSDVLVVDPPRKG 382 (457)
Q Consensus 307 cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~-nv~~~~~d~~~~~~~~---~~~~D~vi~DPPR~G 382 (457)
||+|.+++.+|. .++++|+|||+|+.|++.|++|++.+ +..+ |++|+++|+++.+..+ ...||+||+|||+.+
T Consensus 221 cGtG~~sl~la~-~ga~~V~~vD~s~~al~~A~~N~~~n--~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii~DPP~~~ 297 (385)
T 2b78_A 221 SYTAAFSVAAAM-GGAMATTSVDLAKRSRALSLAHFEAN--HLDMANHQLVVMDVFDYFKYARRHHLTYDIIIIDPPSFA 297 (385)
T ss_dssp CTTTHHHHHHHH-TTBSEEEEEESCTTHHHHHHHHHHHT--TCCCTTEEEEESCHHHHHHHHHHTTCCEEEEEECCCCC-
T ss_pred eccCHHHHHHHH-CCCCEEEEEECCHHHHHHHHHHHHHc--CCCccceEEEECCHHHHHHHHHHhCCCccEEEECCCCCC
Confidence 999999999997 35779999999999999999999984 2333 8999999998765433 247999999999963
Q ss_pred ----ccHHHH-------HH-HHhcCCCCcEEEEeccCCCCCchh-chhhHHHHHHHhcccccccc------CCCCC---C
Q 044572 383 ----LDSSLV-------HA-LQSIGSAERKAKSLSESSSSMVKE-EKRPWILRAKEASVQIGSKT------NSENQ---S 440 (457)
Q Consensus 383 ----l~~~v~-------~~-l~~~~~~~~ivyvs~~~~~c~~~~-~~~~~~~~~~~~~~~~~~~~------~~~~~---~ 440 (457)
...+.+ .. ...++ +++++|++ |+... ....|...++.+..+.+... ..||+ +
T Consensus 298 ~~~~~~~~~~~~~~~ll~~~~~~L~-pgG~l~~~-----~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~~~D~p~~~~ 371 (385)
T 2b78_A 298 RNKKEVFSVSKDYHKLIRQGLEILS-ENGLIIAS-----TNAANMTVSQFKKQIEKGFGKQKHTYLDLQQLPSDFAVNVQ 371 (385)
T ss_dssp ----CCCCHHHHHHHHHHHHHHTEE-EEEEEEEE-----ECCTTSCHHHHHHHHHHHHTTCCCEEEEEECCCTTSCCCTT
T ss_pred CChhhHHHHHHHHHHHHHHHHHhcC-CCcEEEEE-----eCCCcCCHHHHHHHHHHHHHHcCCcEEEeCCCCCCCCCCCC
Confidence 222222 22 23444 78888888 44333 34556666666655543222 23664 4
Q ss_pred CCCceeeeeccc
Q 044572 441 LPQTLIYISCGW 452 (457)
Q Consensus 441 ~p~~~~yl~~~~ 452 (457)
.|++. |||+.+
T Consensus 372 ~~e~~-yLk~~~ 382 (385)
T 2b78_A 372 DESSN-YLKVFT 382 (385)
T ss_dssp CGGGC-CCEEEE
T ss_pred CCCCC-CceEEE
Confidence 67777 999754
No 5
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.97 E-value=2.7e-30 Score=265.31 Aligned_cols=320 Identities=13% Similarity=0.071 Sum_probs=220.8
Q ss_pred cCCCccceeeeeEE-----eee------cCCC-ceEEEeecCc---cceEeCC-CCccCChhHHHHHHHHHHHHHhc--C
Q 044572 94 SCRLYGWRCRAKLA-----VRG------TSTS-PLIGLYQEGT---HNVVDIP-HCKAHHPRINAAVELLRQGIKEL--N 155 (457)
Q Consensus 94 s~~~~~YRnR~~l~-----v~~------~~g~-~~vGf~~~~s---~~iv~i~-~C~i~~p~i~~~l~~l~~~l~~~--~ 155 (457)
.+.+|.|||++++. .+. .+|+ ..+|||.++| ++|++++ +|++.++.+++.++.+.++++.. +
T Consensus 16 ~g~pw~yrn~i~~~~~~~~~g~~v~v~~~~g~~l~~G~~~~~s~~~~ri~~~~~~~~i~~~~~~~~l~~~~~~~~~~~~~ 95 (396)
T 2as0_A 16 KGAMIVFKKGVVRVEGDIKPGDIVEVYTRGGKFLGKGFANPNSNIMVRIVTKDKDVEINKDLFKRRIKKANEYRKKVLKY 95 (396)
T ss_dssp TTCCEEEGGGEEEEESCCCTTCEEEEEETTCCEEEEEEECTTSSEEEEEEESCTTCCCSHHHHHHHHHHHHHHHHHTSCC
T ss_pred cCCcEEEHHHccccCCCCCCCCEEEEEcCCCCEEEEEEECCCChHHeehhccCCCCCCCHHHHHHHHHHHHHHHHHHhcC
Confidence 46689999999987 221 2455 5789999999 8999999 99999999999999999999887 7
Q ss_pred CCCcccCCCCC-ceeEEEEEEEeccCCCCccccccCCcEEEEEEeCCCCCCCCCchhHHHHHHHHHHcCCCCCCCceeEE
Q 044572 156 VEPYDEDDRTG-DLRYVQMAVTTYNTSLPASERYRNGKVQITLVWNSRNEKSPNSDKLESLAEFLWRNGGSRSREHYIHS 234 (457)
Q Consensus 156 ~~~y~~~~~~G-~lr~l~l~vr~~~~~~~~~~~~~~~~v~v~lv~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~s 234 (457)
...|+...+.| .|+++.+. ..|+++++.+.+... ...++.+++.|... .+.+.+
T Consensus 96 ~~~yrl~~~~gd~l~gl~vd--------------~~g~~~v~~~~~~~~-----~~~~~~i~~~l~~~------~~~~~~ 150 (396)
T 2as0_A 96 TNVYRMVYGEADYLPGLIVD--------------RFNDIASLQISSAGM-----ERFKLDVAEAIMEV------EPGIET 150 (396)
T ss_dssp CSEEEEEEGGGGTCTTEEEE--------------EETTEEEEEECCHHH-----HTTHHHHHHHHHHH------CTTCCE
T ss_pred CCeEEEEecCCCCCCcEEEE--------------EECCEEEEEECcHHH-----HHHHHHHHHHHHHh------CCCCCE
Confidence 88898887777 68886443 247787776654210 01244556665532 134578
Q ss_pred EEEEeecCCCCc--ccCCeEEEeeccC--eEEEeeeeEEEEECCC----CCCCCCHHHHHHHHHHHHhhCCCCCeEEEEc
Q 044572 235 VWANFQTSTNNV--IFGNRWRHLLGET--DFWENVGGIDISLAPS----SFGQANTRAFDILLRKLQKYVPYGASVTDLY 306 (457)
Q Consensus 235 i~~~~~~~~~~~--~~~~~~~~l~G~~--~~~~~~~g~~~~i~~~----~FfQ~n~~~~~~l~~~i~~~~~~~~~vLDl~ 306 (457)
|+.+ ++..... .++....+++|+. .+....+|++|.+++. +|||.++... ..+.+++.++++|||+|
T Consensus 151 i~~~-~~~~~~~~~~~~~~~~~l~g~~~~~~~~~e~g~~~~~~~~~~~tg~f~~~~~~~----~~~~~~~~~~~~VLDl~ 225 (396)
T 2as0_A 151 VFEK-NTGRSRRREGLPEIERVLLGKEKYRTIIQEGRAKFIVDMRGQKTGFFLDQRENR----LALEKWVQPGDRVLDVF 225 (396)
T ss_dssp EEEE-ECSHHHHHTTCCCEEEEEEESCCCEEEEEETTEEEEEESSSSSSCCCSTTHHHH----HHHGGGCCTTCEEEETT
T ss_pred EEEe-CCcchHhhcCCCcccceecCCCCceEEEEeCCEEEEEeccccccCccCCHHHHH----HHHHHHhhCCCeEEEec
Confidence 8877 4432222 3456778899986 4556679999999985 7999766542 23334444689999999
Q ss_pred ccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccc---cCCccEEEECCCCCCc
Q 044572 307 AGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSW---LVGSDVLVVDPPRKGL 383 (457)
Q Consensus 307 cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~---~~~~D~vi~DPPR~Gl 383 (457)
||+|.+++.+|.. ++++|+|||+++.+++.|++|++.+ +..++++|+++|+.+.+..+ ...||+|++|||+.+.
T Consensus 226 ~G~G~~~~~la~~-g~~~v~~vD~s~~~l~~a~~n~~~n--~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~dpP~~~~ 302 (396)
T 2as0_A 226 TYTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLN--GVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVLDPPAFVQ 302 (396)
T ss_dssp CTTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHT--TCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCCCSCS
T ss_pred CCCCHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHc--CCCccceEEECCHHHHHHHHHhhCCCCCEEEECCCCCCC
Confidence 9999999999975 5779999999999999999999984 22238999999998765432 3579999999999653
Q ss_pred c------------HHHHHHHHhcCCCCcEEEEeccCCCCCchhchhhHHHHHH----Hhccccc--c---ccCCCCC---
Q 044572 384 D------------SSLVHALQSIGSAERKAKSLSESSSSMVKEEKRPWILRAK----EASVQIG--S---KTNSENQ--- 439 (457)
Q Consensus 384 ~------------~~v~~~l~~~~~~~~ivyvs~~~~~c~~~~~~~~~~~~~~----~~~~~~~--~---~~~~~~~--- 439 (457)
+ .-+.+.+..+++.+.++|++ |+.......|..... ....... . ....+|+
T Consensus 303 ~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~~~i~~~~~~~~d~p~~~ 377 (396)
T 2as0_A 303 HEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCS-----CSQHVDLQMFKDMIIAAGAKAGKFLKMLEPYRTQAPDHPILM 377 (396)
T ss_dssp SGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEE-----CCTTSCHHHHHHHHHHHHHHTTEEEEESSCBBCSCTTSCCBT
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEE-----CCCCCCHHHHHHHHHHHHHHcCCeEEEEeccCCCCCCCCcCC
Confidence 2 22233334455344466665 665544444444333 3322221 1 1122554
Q ss_pred CCCCceeeeeccc
Q 044572 440 SLPQTLIYISCGW 452 (457)
Q Consensus 440 ~~p~~~~yl~~~~ 452 (457)
..|++. |||+.+
T Consensus 378 ~~pe~~-yLk~~~ 389 (396)
T 2as0_A 378 ASKDTE-YLKCLF 389 (396)
T ss_dssp TCGGGC-CCEEEE
T ss_pred CCCCCC-CcEEEE
Confidence 567776 888754
No 6
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.97 E-value=5.4e-30 Score=263.04 Aligned_cols=305 Identities=12% Similarity=0.074 Sum_probs=214.2
Q ss_pred EEeeecCCC-ceEEEeecCc---cceEeCC-CCccCChhHHHHHHHHHHHHHhc----CCCCcccCCCCC-ceeEEEEEE
Q 044572 106 LAVRGTSTS-PLIGLYQEGT---HNVVDIP-HCKAHHPRINAAVELLRQGIKEL----NVEPYDEDDRTG-DLRYVQMAV 175 (457)
Q Consensus 106 l~v~~~~g~-~~vGf~~~~s---~~iv~i~-~C~i~~p~i~~~l~~l~~~l~~~----~~~~y~~~~~~G-~lr~l~l~v 175 (457)
+.|....|+ ..+|||.++| ++|++++ +|++..+.+++.++...++.+.. +...|+...+.| .|+++.+.
T Consensus 40 v~v~~~~g~~l~~G~~~~~s~~~~ri~~~~~~~~i~~~~~~~~l~~a~~~~~~~~~~~~~~~yrl~~~egd~l~gl~vd- 118 (396)
T 3c0k_A 40 IDIVDHQGKWLARGAYSPASQIRARVWTFDPSESIDIAFFSRRLQQAQKWRDWLAQKDGLDSYRLIAGESDGLPGITID- 118 (396)
T ss_dssp EEEECTTCCEEEEEEECTTSSEEEEEEESCTTCCCSHHHHHHHHHHHHHHHHHHHHHHTCSEEEEEEGGGGTCTTEEEE-
T ss_pred EEEEcCCCCEEEEEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCceEEEEecCCCCCCceEEE-
Confidence 455545566 5799999999 8999999 99999999999998888877766 788999888888 68986443
Q ss_pred EeccCCCCccccccCCcEEEEEEeCCCCCCCCCchhHHHHHHHHHHcCCCCCCCceeEEEEEEeecCCCC--cccCCeEE
Q 044572 176 TTYNTSLPASERYRNGKVQITLVWNSRNEKSPNSDKLESLAEFLWRNGGSRSREHYIHSVWANFQTSTNN--VIFGNRWR 253 (457)
Q Consensus 176 r~~~~~~~~~~~~~~~~v~v~lv~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~si~~~~~~~~~~--~~~~~~~~ 253 (457)
..|++|++.+.+... ...++.+.+.|+... .+++|+.+ ++.... ...+.+..
T Consensus 119 -------------~~g~~~v~~~~~~~~-----~~~~~~i~~~l~~~~-------~~~~i~~~-~~~~~~~~~g~~~~~~ 172 (396)
T 3c0k_A 119 -------------RFGNFLVLQLLSAGA-----EYQRAALISALQTLY-------PECSIYDR-SDVAVRKKEGMELTQG 172 (396)
T ss_dssp -------------EETTEEEEEECSHHH-----HHTHHHHHHHHHHHC-------TTSEEEEE-ECCTHHHHTTCCCEEE
T ss_pred -------------EECCEEEEEECCHHH-----HHHHHHHHHHHHHhc-------CCCEEEEe-CCchhHhhcCCCccce
Confidence 247788776654210 112445666665421 34678876 543333 23455778
Q ss_pred EeeccC---eEEEeeeeEEEEECCC-----CCCCCCHHHHHHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCCCCEE
Q 044572 254 HLLGET---DFWENVGGIDISLAPS-----SFGQANTRAFDILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARKCRSV 325 (457)
Q Consensus 254 ~l~G~~---~~~~~~~g~~~~i~~~-----~FfQ~n~~~~~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V 325 (457)
+|+|+. .+.++++|++|.+++. +|||.++.... .+.++ .++++|||+|||+|.+++.+|.. ++++|
T Consensus 173 ~l~G~~~~~~~~~~~~g~~f~v~~~~~~~tgff~~~~~~~~----~l~~~-~~~~~VLDl~cG~G~~sl~la~~-g~~~V 246 (396)
T 3c0k_A 173 PVTGELPPALLPIEEHGMKLLVDIQHGHKTGYYLDQRDSRL----ATRRY-VENKRVLNCFSYTGGFAVSALMG-GCSQV 246 (396)
T ss_dssp EEESCCCCSSEEEEETTEEEEECTTTSSTTSSCGGGHHHHH----HHHHH-CTTCEEEEESCTTCSHHHHHHHT-TCSEE
T ss_pred eEcCCCCCceEEEEECCEEEEEeccccccCCcCcCHHHHHH----HHHHh-hCCCeEEEeeccCCHHHHHHHHC-CCCEE
Confidence 899985 6888899999999998 99998876532 23333 46889999999999999999974 46799
Q ss_pred EEEeCCHHHHHHHHHHHhhCCCCC-CCcEEEEEccCCcCcccc---cCCccEEEECCCCCC------------ccHHHHH
Q 044572 326 KCVEINKESQLSFEKTVSRLPKSV-DGNISWHNADNSIEPLSW---LVGSDVLVVDPPRKG------------LDSSLVH 389 (457)
Q Consensus 326 ~gVE~~~~av~~A~~Na~~~~~~~-~~nv~~~~~d~~~~~~~~---~~~~D~vi~DPPR~G------------l~~~v~~ 389 (457)
+|||+|+.+++.|++|++.+ +. .++++|+++|+.+.+..+ ...||+||+|||+.+ +..-+.+
T Consensus 247 ~~vD~s~~al~~a~~n~~~n--gl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~ 324 (396)
T 3c0k_A 247 VSVDTSQEALDIARQNVELN--KLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVMDPPKFVENKSQLMGACRGYKDINML 324 (396)
T ss_dssp EEEESCHHHHHHHHHHHHHT--TCCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCSSTTTCSSSSSCCCTHHHHHHHH
T ss_pred EEEECCHHHHHHHHHHHHHc--CCCccceEEEECCHHHHHHHHHhcCCCCCEEEECCCCCCCChhHHHHHHHHHHHHHHH
Confidence 99999999999999999984 22 238999999998765432 257999999999843 3333444
Q ss_pred HHHhcCCCCcEEEEeccCCCCCchhc-hhhHHHHHH----Hhccccc----cccCCCC---CCCCCceeeeeccc
Q 044572 390 ALQSIGSAERKAKSLSESSSSMVKEE-KRPWILRAK----EASVQIG----SKTNSEN---QSLPQTLIYISCGW 452 (457)
Q Consensus 390 ~l~~~~~~~~ivyvs~~~~~c~~~~~-~~~~~~~~~----~~~~~~~----~~~~~~~---~~~p~~~~yl~~~~ 452 (457)
++..++ +++++|++ |+.... ...|..... +....+. .....+| ...|++. |||+.+
T Consensus 325 ~~~~Lk-pgG~l~~~-----~~~~~~~~~~~~~~i~~~~~~~g~~~~~i~~~~~~~d~p~~~~~~e~~-yLk~~~ 392 (396)
T 3c0k_A 325 AIQLLN-EGGILLTF-----SCSGLMTSDLFQKIIADAAIDAGRDVQFIEQFRQAADHPVIATYPEGL-YLKGFA 392 (396)
T ss_dssp HHHTEE-EEEEEEEE-----ECCTTCCHHHHHHHHHHHHHHHTCCEEEEEEEECCTTSCEETTCGGGC-CCEEEE
T ss_pred HHHhcC-CCcEEEEE-----eCCCcCCHHHHHHHHHHHHHHcCCeEEEEEECCCCCCCCCCCCCCCCC-ccEEEE
Confidence 555565 78888887 333322 223444333 3322221 1112355 3567777 998754
No 7
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.96 E-value=2.9e-29 Score=256.44 Aligned_cols=313 Identities=16% Similarity=0.079 Sum_probs=212.1
Q ss_pred cccCCCccceeeeeE--------EeeecCCC-ceEEEeecCc---cceEeCC-CCccCChhHHHHHHHHHHHHH----hc
Q 044572 92 FDSCRLYGWRCRAKL--------AVRGTSTS-PLIGLYQEGT---HNVVDIP-HCKAHHPRINAAVELLRQGIK----EL 154 (457)
Q Consensus 92 ~~s~~~~~YRnR~~l--------~v~~~~g~-~~vGf~~~~s---~~iv~i~-~C~i~~p~i~~~l~~l~~~l~----~~ 154 (457)
+..+.+|.|||++++ .|.. +|+ ..+|||.++| ++|++.+ +|++..+ +.+.+....++.+ +.
T Consensus 13 ~~~~~p~~yrn~~~~~~~~~g~v~v~~-~g~~l~~g~~~~~s~~~~ri~~~~~~~~i~~~-~~~~l~~~~~~r~~~~~~~ 90 (382)
T 1wxx_A 13 LLSRHLWVFRRDVVSGPETPGLYPVYW-GRRFLALALYNPHTDLAVRAYRFAPAEDPVAA-LLENLAQALARREAVLRQD 90 (382)
T ss_dssp HHTTCCEECGGGEEECCSSCEEEEEEE-TTEEEEEEEECTTSSSCEEEEESSCCSCHHHH-HHHHHHHHHHHHHHHHHHC
T ss_pred HhcCCCeEEhhhhccCCCCCeEEEEEE-CCEEEEEEEECCCCCEEEEEEECCCCCCcCHH-HHHHHHHHHHHHHHHHhcC
Confidence 346778999999999 8876 665 6799999999 8999998 8998877 5444433322222 23
Q ss_pred CCCCcccCCCCC-ceeEEEEEEEeccCCCCccccccCCcEEEEEEeCCCCCCCCCchhHHHHHHHHHHcCCCCCCCceeE
Q 044572 155 NVEPYDEDDRTG-DLRYVQMAVTTYNTSLPASERYRNGKVQITLVWNSRNEKSPNSDKLESLAEFLWRNGGSRSREHYIH 233 (457)
Q Consensus 155 ~~~~y~~~~~~G-~lr~l~l~vr~~~~~~~~~~~~~~~~v~v~lv~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~i~ 233 (457)
+...|+...+.| .|+++.+. ..|++|++++++... ...++.+++.+.+. . .
T Consensus 91 ~~~~yr~~~~~~d~l~~l~vd--------------~~g~~~vv~~~~~~~-----~~~~~~i~~~l~~~------~---~ 142 (382)
T 1wxx_A 91 PEGGYRLVHAEGDLLPGLVVD--------------YYAGHAVVQATAHAW-----EGLLPQVAEALRPH------V---Q 142 (382)
T ss_dssp TTSEEEEEEGGGGTCTTEEEE--------------EETTEEEEEECSHHH-----HTTHHHHHHHHGGG------C---S
T ss_pred CCCeEEEEeCCCCCCCcEEEE--------------EECCEEEEEECcHHH-----HHHHHHHHHHHHHH------h---h
Confidence 788999888776 68986443 236788877664210 12345566665421 1 6
Q ss_pred EEEEEeecCCCCc--ccCCeEEEeeccC--eEEEeeeeEEEEECCC-----CCCCCCHHHHHHHHHHHHhhCCCCCeEEE
Q 044572 234 SVWANFQTSTNNV--IFGNRWRHLLGET--DFWENVGGIDISLAPS-----SFGQANTRAFDILLRKLQKYVPYGASVTD 304 (457)
Q Consensus 234 si~~~~~~~~~~~--~~~~~~~~l~G~~--~~~~~~~g~~~~i~~~-----~FfQ~n~~~~~~l~~~i~~~~~~~~~vLD 304 (457)
+++.+ ++..... ..+....+++|+. .+...++|++|.+++. +|||.++.... .+.++ ++++|||
T Consensus 143 ~i~~~-~~~~~~~~~~~~~~~~~l~G~~~~~~~~~e~g~~f~i~~~~~~~~g~f~~~~~~~~----~~~~~--~~~~VLD 215 (382)
T 1wxx_A 143 SVLAK-NDARTRELEGLPLYVRPLLGEVPERVQVQEGRVRYLVDLRAGQKTGAYLDQRENRL----YMERF--RGERALD 215 (382)
T ss_dssp EEEEE-ECCTHHHHTTCCCEEEEEESCCCSEEEEEETTEEEEEECSTTSCCCCCGGGHHHHH----HGGGC--CEEEEEE
T ss_pred EEEEc-CCchhhhhcCCCcccceecCCCCceEEEEECCEEEEEEchhcccCccccchHHHHH----HHHhc--CCCeEEE
Confidence 78877 5443333 3456778899986 5667789999999987 79997665422 23333 6889999
Q ss_pred EcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccc---cCCccEEEECCCCC
Q 044572 305 LYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSW---LVGSDVLVVDPPRK 381 (457)
Q Consensus 305 l~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~---~~~~D~vi~DPPR~ 381 (457)
+|||+|.+++.+|.. +.+|+|||+|+.+++.|++|++.+ +.++++|+++|+.+.+..+ ...||+|++|||+.
T Consensus 216 lg~G~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~n~~~n---~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~dpP~~ 290 (382)
T 1wxx_A 216 VFSYAGGFALHLALG--FREVVAVDSSAEALRRAEENARLN---GLGNVRVLEANAFDLLRRLEKEGERFDLVVLDPPAF 290 (382)
T ss_dssp ETCTTTHHHHHHHHH--EEEEEEEESCHHHHHHHHHHHHHT---TCTTEEEEESCHHHHHHHHHHTTCCEEEEEECCCCS
T ss_pred eeeccCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHc---CCCCceEEECCHHHHHHHHHhcCCCeeEEEECCCCC
Confidence 999999999999986 569999999999999999999984 3456999999998765432 35799999999996
Q ss_pred CccH-----------HHHH-HHHhcCCCCcEEEEeccCCCCCchhchhhHHHHHHHhccccc--------cccCCCCC--
Q 044572 382 GLDS-----------SLVH-ALQSIGSAERKAKSLSESSSSMVKEEKRPWILRAKEASVQIG--------SKTNSENQ-- 439 (457)
Q Consensus 382 Gl~~-----------~v~~-~l~~~~~~~~ivyvs~~~~~c~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~-- 439 (457)
+.+. +++. .+..++ +++++++++ |+.......|.........+.+ .....+|+
T Consensus 291 ~~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~----~~~~~~~~~~~~~i~~~~~~~g~~~~~i~~~~~~~d~p~~ 365 (382)
T 1wxx_A 291 AKGKKDVERAYRAYKEVNLRAIKLLK-EGGILATAS----CSHHMTEPLFYAMVAEAAQDAHRLLRVVEKRGQPFDHPVL 365 (382)
T ss_dssp CCSTTSHHHHHHHHHHHHHHHHHTEE-EEEEEEEEE----CCTTSCHHHHHHHHHHHHHHTTCCEEEEEEECCCTTSCCB
T ss_pred CCChhHHHHHHHHHHHHHHHHHHhcC-CCCEEEEEE----CCCCCCHHHHHHHHHHHHHHcCCeEEEEEcCCCCCCCCCC
Confidence 6432 2333 333444 666666663 4433333334444333322221 11123553
Q ss_pred -CCCCceeeeeccc
Q 044572 440 -SLPQTLIYISCGW 452 (457)
Q Consensus 440 -~~p~~~~yl~~~~ 452 (457)
..|++. |||+.+
T Consensus 366 ~~~pe~~-yLk~~~ 378 (382)
T 1wxx_A 366 LNHPETH-YLKFAV 378 (382)
T ss_dssp TTBGGGC-CCEEEE
T ss_pred CCCCCCC-CcEEEE
Confidence 566776 998754
No 8
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.85 E-value=5.9e-21 Score=186.05 Aligned_cols=168 Identities=13% Similarity=0.017 Sum_probs=127.9
Q ss_pred ceeEEEEEEeecCCCCcccCCeEEEeeccC--eEEEeeeeEEEEECCCCCCCCCHHHHHHHHHHHHhhCCCCCeEEEEcc
Q 044572 230 HYIHSVWANFQTSTNNVIFGNRWRHLLGET--DFWENVGGIDISLAPSSFGQANTRAFDILLRKLQKYVPYGASVTDLYA 307 (457)
Q Consensus 230 ~~i~si~~~~~~~~~~~~~~~~~~~l~G~~--~~~~~~~g~~~~i~~~~FfQ~n~~~~~~l~~~i~~~~~~~~~vLDl~c 307 (457)
+.+.+++.+.+ ...+.+.+....+|+|+. .+ .+.+|++|.+++.+|||.|+..++.+. +...+.++++|||+||
T Consensus 53 ~~~~~v~~~~~-~~~~~~~~~~~~~l~G~~~~~~-~~e~g~~f~~~~~~~f~~~~~~~e~~~--~~~~~~~~~~VLDlgc 128 (272)
T 3a27_A 53 TKCKAILLYTT-QITGEFRTPHVKILYGKETETI-HKEYGCLFKLDVAKIMWSQGNIEERKR--MAFISNENEVVVDMFA 128 (272)
T ss_dssp --CCSEEEEC-----------CCEEEECSCCEEE-EEETTEEEEEETTTSCCCGGGHHHHHH--HHTSCCTTCEEEETTC
T ss_pred CCceEEEEcCC-CCCCcccccceEEEeCCCcEEE-EEECCEEEEEechhEEECCCchHHHHH--HHHhcCCCCEEEEecC
Confidence 56778888765 233344456788999987 22 345899999999999999998887765 3444567899999999
Q ss_pred cccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEECCCCCCccHHH
Q 044572 308 GAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVVDPPRKGLDSSL 387 (457)
Q Consensus 308 G~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~DPPR~Gl~~~v 387 (457)
|+|.+++.+|+..+..+|+|||+++.|++.|++|++.+ +..|+.++++|+.+. .. ...||+|++|||+ ++..-+
T Consensus 129 G~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n---~l~~~~~~~~d~~~~-~~-~~~~D~Vi~d~p~-~~~~~l 202 (272)
T 3a27_A 129 GIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLN---KLNNVIPILADNRDV-EL-KDVADRVIMGYVH-KTHKFL 202 (272)
T ss_dssp TTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHT---TCSSEEEEESCGGGC-CC-TTCEEEEEECCCS-SGGGGH
T ss_pred cCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHc---CCCCEEEEECChHHc-Cc-cCCceEEEECCcc-cHHHHH
Confidence 99999999998755669999999999999999999984 346899999999886 33 4579999999998 665545
Q ss_pred HHHHHhcCCCCcEEEEeccCCCCCch
Q 044572 388 VHALQSIGSAERKAKSLSESSSSMVK 413 (457)
Q Consensus 388 ~~~l~~~~~~~~ivyvs~~~~~c~~~ 413 (457)
.+.+..++ +++++|++ |+..
T Consensus 203 ~~~~~~Lk-pgG~l~~s-----~~~~ 222 (272)
T 3a27_A 203 DKTFEFLK-DRGVIHYH-----ETVA 222 (272)
T ss_dssp HHHHHHEE-EEEEEEEE-----EEEE
T ss_pred HHHHHHcC-CCCEEEEE-----EcCc
Confidence 55566665 88999998 7766
No 9
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.79 E-value=5e-18 Score=170.25 Aligned_cols=187 Identities=12% Similarity=0.112 Sum_probs=134.4
Q ss_pred HHHHHHHHHHcCCCCCCCceeEEEEEEeecCCCCcccCCeEEEeeccCe--EEEeeeeEEEEECCCCCCCCCHHHHHHHH
Q 044572 212 LESLAEFLWRNGGSRSREHYIHSVWANFQTSTNNVIFGNRWRHLLGETD--FWENVGGIDISLAPSSFGQANTRAFDILL 289 (457)
Q Consensus 212 ~~~l~~~l~~~~~~~~~~~~i~si~~~~~~~~~~~~~~~~~~~l~G~~~--~~~~~~g~~~~i~~~~FfQ~n~~~~~~l~ 289 (457)
.+.+++.+... .+. .+++.+.+. ......+....+++|+.. ...+.+|++|.+++..|||.+..+++.+
T Consensus 117 ~~~i~~~l~~~------~~~-~~v~~~~~~-~~g~~r~~~~~~l~G~~~~~~~~~e~g~~f~~d~~~~~~~~~~~~er~- 187 (336)
T 2yx1_A 117 RKEIGELAYKL------IPC-KGVFRRKSE-VKGEFRVRELEHLAGENRTLTIHKENGYRLWVDIAKVYFSPRLGGERA- 187 (336)
T ss_dssp HHHHHHHHHHH------SCC-SEEEEEC--------CCCCEEEEEECCCCEEEEEETTEEEEEETTTSCCCGGGHHHHH-
T ss_pred HHHHHHHHHHH------CCC-cEEEEcCCC-CCCcccccceEEEeCCCCcEEEEEECCEEEEEehHHhccCCccHHHHH-
Confidence 45566666543 233 577765422 233345567788999853 3456689999999999999998888876
Q ss_pred HHHHhhCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccC
Q 044572 290 RKLQKYVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLV 369 (457)
Q Consensus 290 ~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~ 369 (457)
.+.+++.++.+|||+|||+|.+++. |+ ++.+|+|||+|+.|++.|++|++.+ +..++++++++|+.+.+ .
T Consensus 188 -~i~~~~~~~~~VLDlg~G~G~~~l~-a~--~~~~V~~vD~s~~ai~~a~~n~~~n--~l~~~v~~~~~D~~~~~----~ 257 (336)
T 2yx1_A 188 -RIMKKVSLNDVVVDMFAGVGPFSIA-CK--NAKKIYAIDINPHAIELLKKNIKLN--KLEHKIIPILSDVREVD----V 257 (336)
T ss_dssp -HHHHHCCTTCEEEETTCTTSHHHHH-TT--TSSEEEEEESCHHHHHHHHHHHHHT--TCTTTEEEEESCGGGCC----C
T ss_pred -HHHHhcCCCCEEEEccCccCHHHHh-cc--CCCEEEEEECCHHHHHHHHHHHHHc--CCCCcEEEEECChHHhc----C
Confidence 4556666789999999999999999 86 4679999999999999999999984 33368999999998865 6
Q ss_pred CccEEEECCCCCCccHHHHHHHHh-cCCCCcEEEEeccCCCCCchhchhhHHHHHHHh
Q 044572 370 GSDVLVVDPPRKGLDSSLVHALQS-IGSAERKAKSLSESSSSMVKEEKRPWILRAKEA 426 (457)
Q Consensus 370 ~~D~vi~DPPR~Gl~~~v~~~l~~-~~~~~~ivyvs~~~~~c~~~~~~~~~~~~~~~~ 426 (457)
.||+|++|||+.+. ++++.+.. +++.+.+++.+ |++. ...+.+.+...
T Consensus 258 ~fD~Vi~dpP~~~~--~~l~~~~~~L~~gG~l~~~~-----~~~~--~~~~~~~l~~~ 306 (336)
T 2yx1_A 258 KGNRVIMNLPKFAH--KFIDKALDIVEEGGVIHYYT-----IGKD--FDKAIKLFEKK 306 (336)
T ss_dssp CEEEEEECCTTTGG--GGHHHHHHHEEEEEEEEEEE-----EESS--SHHHHHHHHHH
T ss_pred CCcEEEECCcHhHH--HHHHHHHHHcCCCCEEEEEE-----eecC--chHHHHHHHHh
Confidence 79999999998765 35555444 44344455555 5554 44555555544
No 10
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.77 E-value=1e-17 Score=163.58 Aligned_cols=161 Identities=17% Similarity=0.112 Sum_probs=115.2
Q ss_pred eEEEEEEeecCCCCcccCCeEEEeeccCeEEE-eeeeEEEEECC--CCCCCCCHHHHHHHHHHHHhhCCCCCeEEEEccc
Q 044572 232 IHSVWANFQTSTNNVIFGNRWRHLLGETDFWE-NVGGIDISLAP--SSFGQANTRAFDILLRKLQKYVPYGASVTDLYAG 308 (457)
Q Consensus 232 i~si~~~~~~~~~~~~~~~~~~~l~G~~~~~~-~~~g~~~~i~~--~~FfQ~n~~~~~~l~~~i~~~~~~~~~vLDl~cG 308 (457)
+.+++.+ +. ......+.+..+++|+....+ .++|++|.++. ..|+|.|+...+.+.+ ++.++++|||+|||
T Consensus 62 ~~~i~~~-~~-~~~~~~~~~~~~l~G~~~~~~~~e~g~~f~~d~~~~~f~~~~~~~~~~l~~----~~~~~~~VLDlgcG 135 (278)
T 2frn_A 62 VKTVLRK-GH-IHGETRKPDYELLYGSDTVTVHVENGIKYKLDVAKIMFSPANVKERVRMAK----VAKPDELVVDMFAG 135 (278)
T ss_dssp CSEEEEC-C-----------CEEEECSCCEEEEEETTEEEEEETTTSCCCGGGHHHHHHHHH----HCCTTCEEEETTCT
T ss_pred CCEEEEe-CC-ccCCccccceEEEECCCCEEEEEECCEEEEEEccceeEcCCcHHHHHHHHH----hCCCCCEEEEeccc
Confidence 4677765 32 223344567788999876544 68999999975 6799999888766654 35568999999999
Q ss_pred ccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEECCCCCCccHHHH
Q 044572 309 AGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVVDPPRKGLDSSLV 388 (457)
Q Consensus 309 ~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~DPPR~Gl~~~v~ 388 (457)
+|.+++.+|+.+ +.+|+|||+|+.|++.|++|++.+ +..++++++++|+.+... ...||+|++|||... ..-+.
T Consensus 136 ~G~~~~~la~~~-~~~V~~vD~s~~~~~~a~~n~~~n--~~~~~v~~~~~D~~~~~~--~~~fD~Vi~~~p~~~-~~~l~ 209 (278)
T 2frn_A 136 IGHLSLPIAVYG-KAKVIAIEKDPYTFKFLVENIHLN--KVEDRMSAYNMDNRDFPG--ENIADRILMGYVVRT-HEFIP 209 (278)
T ss_dssp TTTTHHHHHHHT-CCEEEEECCCHHHHHHHHHHHHHT--TCTTTEEEECSCTTTCCC--CSCEEEEEECCCSSG-GGGHH
T ss_pred CCHHHHHHHHhC-CCEEEEEECCHHHHHHHHHHHHHc--CCCceEEEEECCHHHhcc--cCCccEEEECCchhH-HHHHH
Confidence 999999999864 348999999999999999999984 333469999999988764 467999999999532 22233
Q ss_pred HHHHhcCCCCcEEEEe
Q 044572 389 HALQSIGSAERKAKSL 404 (457)
Q Consensus 389 ~~l~~~~~~~~ivyvs 404 (457)
+....+++.+.+++.+
T Consensus 210 ~~~~~LkpgG~l~~~~ 225 (278)
T 2frn_A 210 KALSIAKDGAIIHYHN 225 (278)
T ss_dssp HHHHHEEEEEEEEEEE
T ss_pred HHHHHCCCCeEEEEEE
Confidence 3444565444555554
No 11
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.75 E-value=7.5e-18 Score=172.28 Aligned_cols=186 Identities=16% Similarity=0.166 Sum_probs=126.4
Q ss_pred eEEEeeccC--eEEEeeeeEEEEECCC-----CCCCCCHHHHHHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCCCC
Q 044572 251 RWRHLLGET--DFWENVGGIDISLAPS-----SFGQANTRAFDILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARKCR 323 (457)
Q Consensus 251 ~~~~l~G~~--~~~~~~~g~~~~i~~~-----~FfQ~n~~~~~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~~ 323 (457)
...+++|+. .+..+++|++|.++.. +||..++.... .+..++.+|++|||+|||+|.+++.+|.. ++.
T Consensus 164 ~~~~l~G~~~~~~~v~E~g~~f~vd~~~~~~tG~f~dqr~~r~----~l~~~~~~g~~VLDlg~GtG~~sl~~a~~-ga~ 238 (393)
T 4dmg_A 164 RVGVVYGEVPEVLEVEEDGLRFPIPLALAQKTGYYLDQRENRR----LFEAMVRPGERVLDVYSYVGGFALRAARK-GAY 238 (393)
T ss_dssp CCEEEEECCCSEEEEEETTEEEEEETTTCCTTSSCGGGHHHHH----HHHTTCCTTCEEEEESCTTTHHHHHHHHT-TCE
T ss_pred ccceEecCCCCcEEEEECCEEEEEechhccccCcCCCHHHHHH----HHHHHhcCCCeEEEcccchhHHHHHHHHc-CCe
Confidence 467788874 3555779999999864 48887665532 23344545899999999999999999974 554
Q ss_pred EEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEECCCCCCcc-----------HHHHHH-H
Q 044572 324 SVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVVDPPRKGLD-----------SSLVHA-L 391 (457)
Q Consensus 324 ~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~DPPR~Gl~-----------~~v~~~-l 391 (457)
|++||+|+.|++.|++|++.|+ . . .++.++|+++.+....+.||+|++|||....+ .++++. +
T Consensus 239 -V~avDis~~al~~a~~n~~~ng--~-~-~~~~~~D~~~~l~~~~~~fD~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~ 313 (393)
T 4dmg_A 239 -ALAVDKDLEALGVLDQAALRLG--L-R-VDIRHGEALPTLRGLEGPFHHVLLDPPTLVKRPEELPAMKRHLVDLVREAL 313 (393)
T ss_dssp -EEEEESCHHHHHHHHHHHHHHT--C-C-CEEEESCHHHHHHTCCCCEEEEEECCCCCCSSGGGHHHHHHHHHHHHHHHH
T ss_pred -EEEEECCHHHHHHHHHHHHHhC--C-C-CcEEEccHHHHHHHhcCCCCEEEECCCcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999843 2 2 25679999876544334599999999974321 123333 3
Q ss_pred HhcCCCCcEEEEeccCCCCCchhchhhHHHHHHHhccccccc--------cCCCC---CCCCCceeeeeccc
Q 044572 392 QSIGSAERKAKSLSESSSSMVKEEKRPWILRAKEASVQIGSK--------TNSEN---QSLPQTLIYISCGW 452 (457)
Q Consensus 392 ~~~~~~~~ivyvs~~~~~c~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~---~~~p~~~~yl~~~~ 452 (457)
..+++.+.+++++ |++......|......+..+.+.. ...+| ..+|++. |||+.+
T Consensus 314 ~~LkpGG~Lv~~s-----~s~~~~~~~f~~~v~~a~~~~g~~~~i~~~~~~~~DhP~~~~~pe~~-yLK~~~ 379 (393)
T 4dmg_A 314 RLLAEEGFLWLSS-----CSYHLRLEDLLEVARRAAADLGRRLRVHRVTYQPEDHPWSLHIPESL-YLKTLV 379 (393)
T ss_dssp HTEEEEEEEEEEE-----CCTTSCHHHHHHHHHHHHHHHTCCEEEEEEEECCTTSCEETTCGGGC-CCEEEE
T ss_pred HhcCCCCEEEEEE-----CCCCCCHHHHHHHHHHHHHHhCCeEEEEEEcCCCCCCCcCCCCCCcC-CcEEEE
Confidence 3455455566676 777666555555554444322211 12355 4667777 999754
No 12
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.71 E-value=1.1e-16 Score=160.08 Aligned_cols=173 Identities=16% Similarity=0.124 Sum_probs=118.6
Q ss_pred EEEeecc----CeEEEeeeeEEEEECCCCCCCC--CHHHHH---HHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCCC
Q 044572 252 WRHLLGE----TDFWENVGGIDISLAPSSFGQA--NTRAFD---ILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARKC 322 (457)
Q Consensus 252 ~~~l~G~----~~~~~~~~g~~~~i~~~~FfQ~--n~~~~~---~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~ 322 (457)
..+++|+ ..+...++|++|.+++..|++. +.++.+ .+.+.+.+ ..++.+|||+|||+|.+++.+|.. ++
T Consensus 99 ~~~~~g~~~~~~~~~i~e~g~~f~v~~~~~~~tg~f~dq~~~~~~l~~~~~~-~~~~~~VLDlgcGtG~~sl~la~~-ga 176 (332)
T 2igt_A 99 GRWRFPKEALGETWPLSLLGVEFLGRFTAFRHVGVFPEQIVHWEWLKNAVET-ADRPLKVLNLFGYTGVASLVAAAA-GA 176 (332)
T ss_dssp EEEECSSSCCCSEEEEEETTEEEEEECCSSSCCSCCGGGHHHHHHHHHHHHH-SSSCCEEEEETCTTCHHHHHHHHT-TC
T ss_pred cceEecCCCCCCceEEEECCEEEEEecCccccceechHHHHHHHHHHHHHHh-cCCCCcEEEcccccCHHHHHHHHc-CC
Confidence 3677874 3445567999999999888776 333332 34443332 235789999999999999999974 55
Q ss_pred CEEEEEeCCHHHHHHHHHHHhhCCCCCCC-cEEEEEccCCcCcccc---cCCccEEEECCCCCCcc------------HH
Q 044572 323 RSVKCVEINKESQLSFEKTVSRLPKSVDG-NISWHNADNSIEPLSW---LVGSDVLVVDPPRKGLD------------SS 386 (457)
Q Consensus 323 ~~V~gVE~~~~av~~A~~Na~~~~~~~~~-nv~~~~~d~~~~~~~~---~~~~D~vi~DPPR~Gl~------------~~ 386 (457)
+|++||+|+.|++.|++|++.++ ..+ +++++++|+++.+... ...||+||+|||+.+.+ .+
T Consensus 177 -~V~~VD~s~~al~~a~~n~~~~g--l~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ 253 (332)
T 2igt_A 177 -EVTHVDASKKAIGWAKENQVLAG--LEQAPIRWICEDAMKFIQREERRGSTYDIILTDPPKFGRGTHGEVWQLFDHLPL 253 (332)
T ss_dssp -EEEEECSCHHHHHHHHHHHHHHT--CTTSCEEEECSCHHHHHHHHHHHTCCBSEEEECCCSEEECTTCCEEEHHHHHHH
T ss_pred -EEEEEECCHHHHHHHHHHHHHcC--CCccceEEEECcHHHHHHHHHhcCCCceEEEECCccccCCchHHHHHHHHHHHH
Confidence 99999999999999999998842 222 5999999998765432 35799999999986543 23
Q ss_pred HHHHHHhcCCCCcEEEEeccCCCCCchhchhhHHHHHHHhcccccc
Q 044572 387 LVHALQSIGSAERKAKSLSESSSSMVKEEKRPWILRAKEASVQIGS 432 (457)
Q Consensus 387 v~~~l~~~~~~~~ivyvs~~~~~c~~~~~~~~~~~~~~~~~~~~~~ 432 (457)
+++.+.++-.+++++++++ .|........|..++.++..+.+.
T Consensus 254 ll~~~~~~LkpgG~lli~~---~~~~~~~~~~~~~~l~~a~~~~g~ 296 (332)
T 2igt_A 254 MLDICREILSPKALGLVLT---AYSIRASFYSMHELMRETMRGAGG 296 (332)
T ss_dssp HHHHHHHTBCTTCCEEEEE---ECCTTSCHHHHHHHHHHHTTTSCS
T ss_pred HHHHHHHhcCcCcEEEEEE---CCCCCCCHHHHHHHHHHHHHHcCC
Confidence 4444434333555544431 144444556677777766655543
No 13
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.69 E-value=2.6e-16 Score=153.26 Aligned_cols=144 Identities=19% Similarity=0.125 Sum_probs=109.7
Q ss_pred CeEEEeeccCeEEE-eeeeEEEEECC--CCCCCCCHHHHHHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCCCCEEE
Q 044572 250 NRWRHLLGETDFWE-NVGGIDISLAP--SSFGQANTRAFDILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARKCRSVK 326 (457)
Q Consensus 250 ~~~~~l~G~~~~~~-~~~g~~~~i~~--~~FfQ~n~~~~~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~ 326 (457)
..+++|+|+...++ +.+|++|.+++ ..|++.|.....+ +.+.+.+|++|||+|||+|.||+.+|+. ++.+|+
T Consensus 78 ~~~e~L~G~~~~~~~~E~G~~~~~D~~k~~f~~~~~~er~r----i~~~~~~g~~VlD~~aG~G~~~i~~a~~-g~~~V~ 152 (278)
T 3k6r_A 78 PDYELLYGSDTVTVHVENGIKYKLDVAKIMFSPANVKERVR----MAKVAKPDELVVDMFAGIGHLSLPIAVY-GKAKVI 152 (278)
T ss_dssp --CEEEECSCCEEEEEETTEEEEEETTTSCCCGGGHHHHHH----HHHHCCTTCEEEETTCTTTTTTHHHHHH-TCCEEE
T ss_pred ccceEEecCCcEEEEEECCEEEEEeccceEEcCCcHHHHHH----HHHhcCCCCEEEEecCcCcHHHHHHHHh-cCCeEE
Confidence 35678999876554 67899999986 5788887766544 4445678999999999999999999985 457999
Q ss_pred EEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEECCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 327 CVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVVDPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 327 gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
|+|+|+.|++.+++|++.| +..++++++++|+.++.. ...||.|++|||.... .-+-.++..++ +++++++-
T Consensus 153 avD~np~a~~~~~~N~~~N--~v~~~v~~~~~D~~~~~~--~~~~D~Vi~~~p~~~~-~~l~~a~~~lk-~gG~ih~~ 224 (278)
T 3k6r_A 153 AIEKDPYTFKFLVENIHLN--KVEDRMSAYNMDNRDFPG--ENIADRILMGYVVRTH-EFIPKALSIAK-DGAIIHYH 224 (278)
T ss_dssp EECCCHHHHHHHHHHHHHT--TCTTTEEEECSCTTTCCC--CSCEEEEEECCCSSGG-GGHHHHHHHEE-EEEEEEEE
T ss_pred EEECCHHHHHHHHHHHHHc--CCCCcEEEEeCcHHHhcc--ccCCCEEEECCCCcHH-HHHHHHHHHcC-CCCEEEEE
Confidence 9999999999999999985 445679999999988654 3579999999986532 22333444454 66666553
No 14
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.68 E-value=7.6e-17 Score=164.27 Aligned_cols=137 Identities=12% Similarity=0.110 Sum_probs=107.0
Q ss_pred eeeeEEEEEC---------CCCCCCCCHHHHHHHHHHHHhhC----CCCCeEEEEcccccHHHHHHHhh-CCCCEEEEEe
Q 044572 264 NVGGIDISLA---------PSSFGQANTRAFDILLRKLQKYV----PYGASVTDLYAGAGVIGLSLAAA-RKCRSVKCVE 329 (457)
Q Consensus 264 ~~~g~~~~i~---------~~~FfQ~n~~~~~~l~~~i~~~~----~~~~~vLDl~cG~G~~sl~lA~~-~~~~~V~gVE 329 (457)
+++|.+|.++ .++|||.|...+..++..+.+.. .+|.+|||+|||+|.+|+.+|.. .++++|++||
T Consensus 5 ~E~g~~~~v~~~~~~~~~~~~~Ffn~~~~~nR~l~~~~~~~~~~~~~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avD 84 (392)
T 3axs_A 5 QEGIAKIIVPEIPKTVSSDMPVFYNPRMRVNRDLAVLGLEYLCKKLGRPVKVADPLSASGIRAIRFLLETSCVEKAYAND 84 (392)
T ss_dssp EETTEEEEECCCCSSCCTTCCSSCCGGGHHHHHHHHHHHHHHHHHHCSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEEC
T ss_pred EECCEEEEEecccccccCCCCEEEcCCcHHHHHHHHHHHHHHhhccCCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEE
Confidence 4678889884 46899999888888765554432 24789999999999999999985 3567999999
Q ss_pred CCHHHHHHHHHHHhhCCCCCCCc-EEEEEccCCcCcc-cccCCccEEEECCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 330 INKESQLSFEKTVSRLPKSVDGN-ISWHNADNSIEPL-SWLVGSDVLVVDPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 330 ~~~~av~~A~~Na~~~~~~~~~n-v~~~~~d~~~~~~-~~~~~~D~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
+++++++.+++|++.| +..++ ++++++|+.+.+. .+...||+|++||+ |...++++....+-.+++++|++
T Consensus 85 i~~~av~~~~~N~~~N--gl~~~~v~v~~~Da~~~l~~~~~~~fD~V~lDP~--g~~~~~l~~a~~~Lk~gGll~~t 157 (392)
T 3axs_A 85 ISSKAIEIMKENFKLN--NIPEDRYEIHGMEANFFLRKEWGFGFDYVDLDPF--GTPVPFIESVALSMKRGGILSLT 157 (392)
T ss_dssp SCHHHHHHHHHHHHHT--TCCGGGEEEECSCHHHHHHSCCSSCEEEEEECCS--SCCHHHHHHHHHHEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHh--CCCCceEEEEeCCHHHHHHHhhCCCCcEEEECCC--cCHHHHHHHHHHHhCCCCEEEEE
Confidence 9999999999999984 23334 9999999988765 44457999999994 44445666555533478899998
No 15
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.64 E-value=2.2e-15 Score=137.75 Aligned_cols=136 Identities=22% Similarity=0.266 Sum_probs=105.2
Q ss_pred eeeEEEEECCCCCCCCCHHHHHHHHHHHHhhC-CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHh
Q 044572 265 VGGIDISLAPSSFGQANTRAFDILLRKLQKYV-PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVS 343 (457)
Q Consensus 265 ~~g~~~~i~~~~FfQ~n~~~~~~l~~~i~~~~-~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~ 343 (457)
..|.++.+++.++.+......+.+++.+.... .++.+|||+|||+|.+++.++. .++.+|+|||+|+++++.|++|++
T Consensus 10 ~~g~~l~~~~~~~rp~~~~~~~~l~~~l~~~~~~~~~~vLDlgcG~G~~~~~~~~-~~~~~v~~vD~~~~~~~~a~~~~~ 88 (189)
T 3p9n_A 10 AGGRRIAVPPRGTRPTTDRVRESLFNIVTARRDLTGLAVLDLYAGSGALGLEALS-RGAASVLFVESDQRSAAVIARNIE 88 (189)
T ss_dssp TTTCEEECCSCCC---CHHHHHHHHHHHHHHSCCTTCEEEEETCTTCHHHHHHHH-TTCSEEEEEECCHHHHHHHHHHHH
T ss_pred cCCcEecCCCCCCccCcHHHHHHHHHHHHhccCCCCCEEEEeCCCcCHHHHHHHH-CCCCeEEEEECCHHHHHHHHHHHH
Confidence 34777888888888888888888888877653 2688999999999999998886 456799999999999999999998
Q ss_pred hCCCCCCCcEEEEEccCCcCcccc-cCCccEEEECCCCCCc---cHHHHHHHHh--cCCCCcEEEEe
Q 044572 344 RLPKSVDGNISWHNADNSIEPLSW-LVGSDVLVVDPPRKGL---DSSLVHALQS--IGSAERKAKSL 404 (457)
Q Consensus 344 ~~~~~~~~nv~~~~~d~~~~~~~~-~~~~D~vi~DPPR~Gl---~~~v~~~l~~--~~~~~~ivyvs 404 (457)
.++ .++++++++|+.+..... .+.||+|++|||+... ..++++.+.+ +-.+++++++.
T Consensus 89 ~~~---~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~ 152 (189)
T 3p9n_A 89 ALG---LSGATLRRGAVAAVVAAGTTSPVDLVLADPPYNVDSADVDAILAALGTNGWTREGTVAVVE 152 (189)
T ss_dssp HHT---CSCEEEEESCHHHHHHHCCSSCCSEEEECCCTTSCHHHHHHHHHHHHHSSSCCTTCEEEEE
T ss_pred HcC---CCceEEEEccHHHHHhhccCCCccEEEECCCCCcchhhHHHHHHHHHhcCccCCCeEEEEE
Confidence 742 368999999998764332 3679999999998764 2346666665 44578888876
No 16
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.62 E-value=1.2e-15 Score=155.04 Aligned_cols=139 Identities=12% Similarity=0.043 Sum_probs=106.3
Q ss_pred EeeeeEEEEECC-------CCCCCCCHHHHHHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHH
Q 044572 263 ENVGGIDISLAP-------SSFGQANTRAFDILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQ 335 (457)
Q Consensus 263 ~~~~g~~~~i~~-------~~FfQ~n~~~~~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av 335 (457)
.++++.+|.++. ..|||.+......+...+.+.. ++.+|||+|||+|.+|+.+|...+..+|+++|++++++
T Consensus 6 ~~Eg~~~~~~p~~~~~~~~~~F~np~~~~nr~l~~~~l~~~-~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av 84 (378)
T 2dul_A 6 VQEGKAKILIPKAESIYDSPVFYNPRMALNRDIVVVLLNIL-NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAY 84 (378)
T ss_dssp EEETTEEEEEC--------CCCCCGGGHHHHHHHHHHHHHH-CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHH
T ss_pred EEeCcEEEEecCccccCCCCceeCCchHHHHHHHHHHHHHc-CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHH
Confidence 356788888865 7999988877776655555544 68999999999999999999875667899999999999
Q ss_pred HHHHHHHhhCCCC------------CCCcEEEEEccCCcCcccccCCccEEEECCCCCCccHHHHHHHHhcCCCCcEEEE
Q 044572 336 LSFEKTVSRLPKS------------VDGNISWHNADNSIEPLSWLVGSDVLVVDPPRKGLDSSLVHALQSIGSAERKAKS 403 (457)
Q Consensus 336 ~~A~~Na~~~~~~------------~~~nv~~~~~d~~~~~~~~~~~~D~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyv 403 (457)
+.|++|++.|... +.++++++++|+.+.+..+...||+|++|||... .++++.......+++++|+
T Consensus 85 ~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~~~~~~fD~I~lDP~~~~--~~~l~~a~~~lk~gG~l~v 162 (378)
T 2dul_A 85 ELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMAERHRYFHFIDLDPFGSP--MEFLDTALRSAKRRGILGV 162 (378)
T ss_dssp HHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHHHSTTCEEEEEECCSSCC--HHHHHHHHHHEEEEEEEEE
T ss_pred HHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHHhccCCCCEEEeCCCCCH--HHHHHHHHHhcCCCCEEEE
Confidence 9999999984100 3345999999998765433357999999998543 4566655443347889999
Q ss_pred e
Q 044572 404 L 404 (457)
Q Consensus 404 s 404 (457)
+
T Consensus 163 t 163 (378)
T 2dul_A 163 T 163 (378)
T ss_dssp E
T ss_pred E
Confidence 8
No 17
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.60 E-value=1.4e-14 Score=141.81 Aligned_cols=133 Identities=13% Similarity=0.120 Sum_probs=106.6
Q ss_pred eeeeEEEEECCCCCCCCCHHHHHHHHHHHHhhCC--CCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHH
Q 044572 264 NVGGIDISLAPSSFGQANTRAFDILLRKLQKYVP--YGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKT 341 (457)
Q Consensus 264 ~~~g~~~~i~~~~FfQ~n~~~~~~l~~~i~~~~~--~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~N 341 (457)
.+.|..|.++++.|+ ++..++.+++.+.+++. ++.+|||+|||+|.+++.++.. +..+|+|||+|++|++.|++|
T Consensus 89 ~f~~~~~~v~~~~li--pr~~te~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al~~A~~n 165 (284)
T 1nv8_A 89 EFMGLSFLVEEGVFV--PRPETEELVELALELIRKYGIKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIARKN 165 (284)
T ss_dssp EETTEEEECCTTSCC--CCTTHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHHHHH
T ss_pred EECCeEEEeCCCcee--cChhHHHHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHHHHHHHH
Confidence 457899999999997 46677888888877654 5689999999999999999987 556999999999999999999
Q ss_pred HhhCCCCCCCcEEEEEccCCcCcccccCCc---cEEEECCCCCCccH---------------------HHHHHHH-hcCC
Q 044572 342 VSRLPKSVDGNISWHNADNSIEPLSWLVGS---DVLVVDPPRKGLDS---------------------SLVHALQ-SIGS 396 (457)
Q Consensus 342 a~~~~~~~~~nv~~~~~d~~~~~~~~~~~~---D~vi~DPPR~Gl~~---------------------~v~~~l~-~~~~ 396 (457)
++.+ +..++++|+++|+.+.+. +.| |+|+.|||+.+... .+++.+. ...+
T Consensus 166 ~~~~--~l~~~v~~~~~D~~~~~~---~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~ 240 (284)
T 1nv8_A 166 AERH--GVSDRFFVRKGEFLEPFK---EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDT 240 (284)
T ss_dssp HHHT--TCTTSEEEEESSTTGGGG---GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCC
T ss_pred HHHc--CCCCceEEEECcchhhcc---cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCC
Confidence 9984 233459999999987542 367 99999999876432 4566666 5545
Q ss_pred CCcEEEEe
Q 044572 397 AERKAKSL 404 (457)
Q Consensus 397 ~~~ivyvs 404 (457)
+++.+++.
T Consensus 241 pgG~l~~e 248 (284)
T 1nv8_A 241 SGKIVLME 248 (284)
T ss_dssp TTCEEEEE
T ss_pred CCCEEEEE
Confidence 77777776
No 18
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.59 E-value=5.8e-15 Score=161.39 Aligned_cols=137 Identities=13% Similarity=0.031 Sum_probs=100.4
Q ss_pred eEEEeeeeEEEEECCC-----CCCCCCHHHHHHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHH
Q 044572 260 DFWENVGGIDISLAPS-----SFGQANTRAFDILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKES 334 (457)
Q Consensus 260 ~~~~~~~g~~~~i~~~-----~FfQ~n~~~~~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~a 334 (457)
.+....+|++|.+++. +||..++.... .+..+. +|++|||+|||+|.+++.+|. .++.+|++||+|+.|
T Consensus 501 ~~~v~E~g~~~~v~~~~~~~tG~f~d~r~~r~----~l~~~~-~g~~VLDlg~GtG~~sl~aa~-~ga~~V~aVD~s~~a 574 (703)
T 3v97_A 501 FLEVTEYNAHLWVNLTDYLDTGLFLDHRIARR----MLGQMS-KGKDFLNLFSYTGSATVHAGL-GGARSTTTVDMSRTY 574 (703)
T ss_dssp CEEEEETTEEEEECSSSSSSCSCCGGGHHHHH----HHHHHC-TTCEEEEESCTTCHHHHHHHH-TTCSEEEEEESCHHH
T ss_pred eEEEEECCEEEEEeccccccCCCcccHHHHHH----HHHHhc-CCCcEEEeeechhHHHHHHHH-CCCCEEEEEeCCHHH
Confidence 3555678999999865 46665554322 223333 689999999999999999997 567899999999999
Q ss_pred HHHHHHHHhhCCCCCC-CcEEEEEccCCcCcccccCCccEEEECCCCCCccH-------------HHHHHHHhcCCCCcE
Q 044572 335 QLSFEKTVSRLPKSVD-GNISWHNADNSIEPLSWLVGSDVLVVDPPRKGLDS-------------SLVHALQSIGSAERK 400 (457)
Q Consensus 335 v~~A~~Na~~~~~~~~-~nv~~~~~d~~~~~~~~~~~~D~vi~DPPR~Gl~~-------------~v~~~l~~~~~~~~i 400 (457)
++.|++|++.|+ .. ++++++++|+++++......||+||+|||..+.+. +++..+.++-.++++
T Consensus 575 l~~a~~N~~~ng--l~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~ 652 (703)
T 3v97_A 575 LEWAERNLRLNG--LTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGT 652 (703)
T ss_dssp HHHHHHHHHHTT--CCSTTEEEEESCHHHHHHHCCCCEEEEEECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEE
T ss_pred HHHHHHHHHHcC--CCccceEEEecCHHHHHHhcCCCccEEEECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcE
Confidence 999999999843 32 48999999998865544467999999999754222 233333333347777
Q ss_pred EEEe
Q 044572 401 AKSL 404 (457)
Q Consensus 401 vyvs 404 (457)
+++|
T Consensus 653 L~~s 656 (703)
T 3v97_A 653 IMFS 656 (703)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7787
No 19
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.57 E-value=4.6e-15 Score=137.67 Aligned_cols=132 Identities=20% Similarity=0.282 Sum_probs=93.8
Q ss_pred eEEEEECCCCCC-CCCHHHHHHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhC
Q 044572 267 GIDISLAPSSFG-QANTRAFDILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRL 345 (457)
Q Consensus 267 g~~~~i~~~~Ff-Q~n~~~~~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~ 345 (457)
|..+...++..+ .......+.+++.+.... ++.+|||+|||+|.+++.++.. ++.+|+|||+|+.+++.|++|++.+
T Consensus 23 g~~l~~~~~~~~rp~~~~~~~~l~~~l~~~~-~~~~vLDlgcG~G~~~~~l~~~-~~~~V~~vD~s~~~l~~a~~~~~~~ 100 (202)
T 2fpo_A 23 GRKLPVPDSPGLRPTTDRVRETLFNWLAPVI-VDAQCLDCFAGSGALGLEALSR-YAAGATLIEMDRAVSQQLIKNLATL 100 (202)
T ss_dssp TCEEECCCC------CHHHHHHHHHHHHHHH-TTCEEEETTCTTCHHHHHHHHT-TCSEEEEECSCHHHHHHHHHHHHHT
T ss_pred CcEecCCCCCCCCCCHHHHHHHHHHHHHhhc-CCCeEEEeCCCcCHHHHHHHhc-CCCEEEEEECCHHHHHHHHHHHHHc
Confidence 455555443222 122333344444433221 5789999999999999987764 4579999999999999999999884
Q ss_pred CCCCCCcEEEEEccCCcCcccccCCccEEEECCC-CCCccHHHHHHHHh---cCCCCcEEEEe
Q 044572 346 PKSVDGNISWHNADNSIEPLSWLVGSDVLVVDPP-RKGLDSSLVHALQS---IGSAERKAKSL 404 (457)
Q Consensus 346 ~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~DPP-R~Gl~~~v~~~l~~---~~~~~~ivyvs 404 (457)
+ .++++++++|+.+.+......||+|++||| +.+...++++.+.+ ++ ++++++++
T Consensus 101 ~---~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~~~~~~~~~l~~l~~~~~L~-pgG~l~i~ 159 (202)
T 2fpo_A 101 K---AGNARVVNSNAMSFLAQKGTPHNIVFVDPPFRRGLLEETINLLEDNGWLA-DEALIYVE 159 (202)
T ss_dssp T---CCSEEEECSCHHHHHSSCCCCEEEEEECCSSSTTTHHHHHHHHHHTTCEE-EEEEEEEE
T ss_pred C---CCcEEEEECCHHHHHhhcCCCCCEEEECCCCCCCcHHHHHHHHHhcCccC-CCcEEEEE
Confidence 2 368999999987754333357999999999 55666678888876 54 78888887
No 20
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.51 E-value=1.1e-13 Score=124.33 Aligned_cols=144 Identities=8% Similarity=0.028 Sum_probs=103.7
Q ss_pred EEEECCCCCCCCC--HHHHHHHHHHHHhhC--CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhh
Q 044572 269 DISLAPSSFGQAN--TRAFDILLRKLQKYV--PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSR 344 (457)
Q Consensus 269 ~~~i~~~~FfQ~n--~~~~~~l~~~i~~~~--~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~ 344 (457)
+|.+++..|+|.+ +...+.+.+.+.+.+ .++.+|||+|||+|.+++.++. ...+|+|+|+++.+++.|++|++.
T Consensus 2 ~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~ 79 (183)
T 2yxd_A 2 KYMIPDEEFIRREGVPITKEEIRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAK--RCKFVYAIDYLDGAIEVTKQNLAK 79 (183)
T ss_dssp --CCCSTTSCCBTTBCCCCHHHHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHT--TSSEEEEEECSHHHHHHHHHHHHH
T ss_pred CccCCchheeeccCCCcCHHHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHh--cCCeEEEEeCCHHHHHHHHHHHHH
Confidence 5778889999887 434444445544443 3678999999999999999997 356999999999999999999987
Q ss_pred CCCCCCCcEEEEEccCCcCcccccCCccEEEECCCCCCccHHHHHHHHhcCCCCcEEEEeccCCCCCchhchhhHHHHHH
Q 044572 345 LPKSVDGNISWHNADNSIEPLSWLVGSDVLVVDPPRKGLDSSLVHALQSIGSAERKAKSLSESSSSMVKEEKRPWILRAK 424 (457)
Q Consensus 345 ~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs~~~~~c~~~~~~~~~~~~~~ 424 (457)
+ +..+++++++|+.+.+. .+.||+|+++++ .....+++.+.++ +.+.+++.. +. ......+...+.
T Consensus 80 ~---~~~~~~~~~~d~~~~~~--~~~~D~i~~~~~--~~~~~~l~~~~~~-~gG~l~~~~-----~~-~~~~~~~~~~l~ 145 (183)
T 2yxd_A 80 F---NIKNCQIIKGRAEDVLD--KLEFNKAFIGGT--KNIEKIIEILDKK-KINHIVANT-----IV-LENAAKIINEFE 145 (183)
T ss_dssp T---TCCSEEEEESCHHHHGG--GCCCSEEEECSC--SCHHHHHHHHHHT-TCCEEEEEE-----SC-HHHHHHHHHHHH
T ss_pred c---CCCcEEEEECCcccccc--CCCCcEEEECCc--ccHHHHHHHHhhC-CCCEEEEEe-----cc-cccHHHHHHHHH
Confidence 4 23689999999877322 257999999999 3345678888888 445555543 33 333455666666
Q ss_pred Hhcc
Q 044572 425 EASV 428 (457)
Q Consensus 425 ~~~~ 428 (457)
+.+.
T Consensus 146 ~~g~ 149 (183)
T 2yxd_A 146 SRGY 149 (183)
T ss_dssp HTTC
T ss_pred HcCC
Confidence 5553
No 21
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.51 E-value=3e-14 Score=132.03 Aligned_cols=134 Identities=18% Similarity=0.202 Sum_probs=90.9
Q ss_pred eeEEEEECCCCCCC-CCHHHHHHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhh
Q 044572 266 GGIDISLAPSSFGQ-ANTRAFDILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSR 344 (457)
Q Consensus 266 ~g~~~~i~~~~FfQ-~n~~~~~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~ 344 (457)
.|.++...++..+. ......+.+++.+.... ++.+|||+|||+|.+++.++.. ++.+|+|||+|+++++.|++|++.
T Consensus 21 ~g~~l~~~~~~~~rp~~~~~~~~l~~~l~~~~-~~~~vLDlGcGtG~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~ 98 (201)
T 2ift_A 21 RGRKLPVLNSEGLRPTGDRVKETLFNWLMPYI-HQSECLDGFAGSGSLGFEALSR-QAKKVTFLELDKTVANQLKKNLQT 98 (201)
T ss_dssp TTCEEECC---------CHHHHHHHHHHHHHH-TTCEEEETTCTTCHHHHHHHHT-TCSEEEEECSCHHHHHHHHHHHHH
T ss_pred CCcEecCCCCCCcCcCHHHHHHHHHHHHHHhc-CCCeEEEcCCccCHHHHHHHHc-cCCEEEEEECCHHHHHHHHHHHHH
Confidence 34555554432221 12233344444443322 5789999999999999987764 467999999999999999999987
Q ss_pred CCCCCC-CcEEEEEccCCcCcccc-cCC-ccEEEECCC-CCCccHHHHHHHHh---cCCCCcEEEEe
Q 044572 345 LPKSVD-GNISWHNADNSIEPLSW-LVG-SDVLVVDPP-RKGLDSSLVHALQS---IGSAERKAKSL 404 (457)
Q Consensus 345 ~~~~~~-~nv~~~~~d~~~~~~~~-~~~-~D~vi~DPP-R~Gl~~~v~~~l~~---~~~~~~ivyvs 404 (457)
+ +.. ++++++++|+.+..... .+. ||+|++||| ..+...++++.+.+ ++ ++++++++
T Consensus 99 ~--~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~~~~~~~~~~~l~~~~~~~~Lk-pgG~l~i~ 162 (201)
T 2ift_A 99 L--KCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLDPPFHFNLAEQAISLLCENNWLK-PNALIYVE 162 (201)
T ss_dssp T--TCCTTTEEEECSCHHHHTTSCCSSCCEEEEEECCCSSSCHHHHHHHHHHHTTCEE-EEEEEEEE
T ss_pred h--CCCccceEEEECCHHHHHHhhccCCCCCEEEECCCCCCccHHHHHHHHHhcCccC-CCcEEEEE
Confidence 4 221 58999999987754332 357 999999999 44445567777754 44 77777777
No 22
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.50 E-value=8.3e-14 Score=133.25 Aligned_cols=116 Identities=14% Similarity=0.006 Sum_probs=91.2
Q ss_pred eeEEEEECCCCCCCC--CHHHHHHHHHHHHhhCC----CCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHH
Q 044572 266 GGIDISLAPSSFGQA--NTRAFDILLRKLQKYVP----YGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFE 339 (457)
Q Consensus 266 ~g~~~~i~~~~FfQ~--n~~~~~~l~~~i~~~~~----~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~ 339 (457)
.|.+|.++++.|+|. |+..++.++..+.+.+. ++.+|||+|||+|.+++.++......+|+|||+++.|++.|+
T Consensus 27 ~~~~~~~~~~~~~p~~~~r~~~~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~ 106 (254)
T 2h00_A 27 FGLSIDIPLERLIPTVPLRLNYIHWVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAK 106 (254)
T ss_dssp HCCCCCCCTTSCCCCHHHHHHHHHHHHHHHCCCCGGGCCCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHH
T ss_pred CCeeeecCccccCCCccchHHHHHHHHHHHhhccccCCCCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHH
Confidence 466788889999997 66778888888877653 467999999999999999987533359999999999999999
Q ss_pred HHHhhCCCCCCCcEEEEEccCCcC-ccccc----CCccEEEECCCCCCc
Q 044572 340 KTVSRLPKSVDGNISWHNADNSIE-PLSWL----VGSDVLVVDPPRKGL 383 (457)
Q Consensus 340 ~Na~~~~~~~~~nv~~~~~d~~~~-~~~~~----~~~D~vi~DPPR~Gl 383 (457)
+|++.+ +..++++++++|+.+. ...+. ..||+|++|||+...
T Consensus 107 ~~~~~~--~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i~~npp~~~~ 153 (254)
T 2h00_A 107 KNVEQN--NLSDLIKVVKVPQKTLLMDALKEESEIIYDFCMCNPPFFAN 153 (254)
T ss_dssp HHHHHT--TCTTTEEEEECCTTCSSTTTSTTCCSCCBSEEEECCCCC--
T ss_pred HHHHHc--CCCccEEEEEcchhhhhhhhhhcccCCcccEEEECCCCccC
Confidence 999874 3334699999998762 21222 479999999998654
No 23
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.50 E-value=2.5e-13 Score=131.81 Aligned_cols=112 Identities=17% Similarity=0.164 Sum_probs=93.0
Q ss_pred eeeEEEEECCCCCCCCCHHHHHHHHHHHHhhC-CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHh
Q 044572 265 VGGIDISLAPSSFGQANTRAFDILLRKLQKYV-PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVS 343 (457)
Q Consensus 265 ~~g~~~~i~~~~FfQ~n~~~~~~l~~~i~~~~-~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~ 343 (457)
+.+..|.++++.|+. +..++.+++.+.+.+ .++.+|||+|||+|.+++.++...+..+|+|+|+|+.+++.|++|++
T Consensus 77 f~~~~~~~~~~~~ip--r~~te~l~~~~l~~~~~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~ 154 (276)
T 2b3t_A 77 FWSLPLFVSPATLIP--RPDTECLVEQALARLPEQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQ 154 (276)
T ss_dssp ETTEEEECCTTSCCC--CTTHHHHHHHHHHHSCSSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHH
T ss_pred ECCceEEeCCCCccc--CchHHHHHHHHHHhcccCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHH
Confidence 567889999999986 455788888888876 46789999999999999999976555699999999999999999998
Q ss_pred hCCCCCCCcEEEEEccCCcCcccccCCccEEEECCCCCCc
Q 044572 344 RLPKSVDGNISWHNADNSIEPLSWLVGSDVLVVDPPRKGL 383 (457)
Q Consensus 344 ~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~DPPR~Gl 383 (457)
.+ +..+++++++|+.+... .+.||+|+.|||+.+.
T Consensus 155 ~~---~~~~v~~~~~d~~~~~~--~~~fD~Iv~npPy~~~ 189 (276)
T 2b3t_A 155 HL---AIKNIHILQSDWFSALA--GQQFAMIVSNPPYIDE 189 (276)
T ss_dssp HH---TCCSEEEECCSTTGGGT--TCCEEEEEECCCCBCT
T ss_pred Hc---CCCceEEEEcchhhhcc--cCCccEEEECCCCCCc
Confidence 74 23579999999977432 3579999999998654
No 24
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.49 E-value=1.1e-12 Score=121.30 Aligned_cols=117 Identities=23% Similarity=0.248 Sum_probs=94.2
Q ss_pred CCCCCCHHHHHHHHHHHHhh-CCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEE
Q 044572 276 SFGQANTRAFDILLRKLQKY-VPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNIS 354 (457)
Q Consensus 276 ~FfQ~n~~~~~~l~~~i~~~-~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~ 354 (457)
+.|+.+...++.++..+... ..++.+|||+|||+|.+++.++.. +..+|+|||+++.+++.|++|++.+ .. +++
T Consensus 26 ~~~~~~~~~~~~l~~~~~~~~~~~~~~vlD~g~G~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~---~~-~~~ 100 (207)
T 1wy7_A 26 EQYRTPGNAASELLWLAYSLGDIEGKVVADLGAGTGVLSYGALLL-GAKEVICVEVDKEAVDVLIENLGEF---KG-KFK 100 (207)
T ss_dssp TCCCCCHHHHHHHHHHHHHTTSSTTCEEEEETCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHTGGG---TT-SEE
T ss_pred eeecCchHHHHHHHHHHHHcCCCCcCEEEEeeCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHc---CC-CEE
Confidence 34778888888888776543 236789999999999999999975 5568999999999999999999873 22 799
Q ss_pred EEEccCCcCcccccCCccEEEECCC----CCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 355 WHNADNSIEPLSWLVGSDVLVVDPP----RKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 355 ~~~~d~~~~~~~~~~~~D~vi~DPP----R~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
++++|+.+.. ..||+|++||| +.+....+++.+.+.. +.+|++
T Consensus 101 ~~~~d~~~~~----~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~l---~~~~~~ 147 (207)
T 1wy7_A 101 VFIGDVSEFN----SRVDIVIMNPPFGSQRKHADRPFLLKAFEIS---DVVYSI 147 (207)
T ss_dssp EEESCGGGCC----CCCSEEEECCCCSSSSTTTTHHHHHHHHHHC---SEEEEE
T ss_pred EEECchHHcC----CCCCEEEEcCCCccccCCchHHHHHHHHHhc---CcEEEE
Confidence 9999997742 47999999999 4566667777776664 568887
No 25
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.48 E-value=6.1e-14 Score=125.02 Aligned_cols=132 Identities=18% Similarity=0.115 Sum_probs=100.3
Q ss_pred eeEEEEECCCCCCCCCHHHHHHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhC
Q 044572 266 GGIDISLAPSSFGQANTRAFDILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRL 345 (457)
Q Consensus 266 ~g~~~~i~~~~FfQ~n~~~~~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~ 345 (457)
.+..|.++++ +........+.+++.+...+.++.+|||+|||+|.+++.++.. +. +|+|||+|+.+++.|++|++.+
T Consensus 10 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~-~~-~v~~vD~~~~~~~~a~~~~~~~ 86 (171)
T 1ws6_A 10 RGVALKVPAS-ARPSPVRLRKALFDYLRLRYPRRGRFLDPFAGSGAVGLEAASE-GW-EAVLVEKDPEAVRLLKENVRRT 86 (171)
T ss_dssp TTCEECCCTT-CCCCCHHHHHHHHHHHHHHCTTCCEEEEETCSSCHHHHHHHHT-TC-EEEEECCCHHHHHHHHHHHHHH
T ss_pred CCeEecCCCC-CCCCHHHHHHHHHHHHHhhccCCCeEEEeCCCcCHHHHHHHHC-CC-eEEEEeCCHHHHHHHHHHHHHc
Confidence 4667777777 6666666666777766554436889999999999999999985 33 5999999999999999999874
Q ss_pred CCCCCCcEEEEEccCCcCccccc---CCccEEEECCCCCCccHHHHHHHH--hcCCCCcEEEEe
Q 044572 346 PKSVDGNISWHNADNSIEPLSWL---VGSDVLVVDPPRKGLDSSLVHALQ--SIGSAERKAKSL 404 (457)
Q Consensus 346 ~~~~~~nv~~~~~d~~~~~~~~~---~~~D~vi~DPPR~Gl~~~v~~~l~--~~~~~~~ivyvs 404 (457)
+ . +++++++|+.+.+.... ..||+|++|||..+...++++.+. ++-.++++++++
T Consensus 87 ~---~-~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~L~~gG~~~~~ 146 (171)
T 1ws6_A 87 G---L-GARVVALPVEVFLPEAKAQGERFTVAFMAPPYAMDLAALFGELLASGLVEAGGLYVLQ 146 (171)
T ss_dssp T---C-CCEEECSCHHHHHHHHHHTTCCEEEEEECCCTTSCTTHHHHHHHHHTCEEEEEEEEEE
T ss_pred C---C-ceEEEeccHHHHHHhhhccCCceEEEEECCCCchhHHHHHHHHHhhcccCCCcEEEEE
Confidence 2 2 78999999877433221 379999999998644456777776 433477888887
No 26
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.48 E-value=5e-13 Score=136.02 Aligned_cols=145 Identities=23% Similarity=0.188 Sum_probs=109.5
Q ss_pred eeEEEEECCCCCCCCCH-HHHHHHHHHHHhhCC----CCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHH
Q 044572 266 GGIDISLAPSSFGQANT-RAFDILLRKLQKYVP----YGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEK 340 (457)
Q Consensus 266 ~g~~~~i~~~~FfQ~n~-~~~~~l~~~i~~~~~----~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~ 340 (457)
.+++|...++.|++.+. ..++.+++.+.+.+. ++.+|||+|||+|.+++.+++. + .+|+|||+|+.+++.|++
T Consensus 196 ~~~~~~~~pgvFs~~~~d~~t~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~-g-~~V~gvDis~~al~~A~~ 273 (381)
T 3dmg_A 196 AEYTFHHLPGVFSAGKVDPASLLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARM-G-AEVVGVEDDLASVLSLQK 273 (381)
T ss_dssp EEEEEEECTTCTTTTSCCHHHHHHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHT-T-CEEEEEESBHHHHHHHHH
T ss_pred ceEEEEeCCCceeCCCCCHHHHHHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHc-C-CEEEEEECCHHHHHHHHH
Confidence 46788899999998854 456667777766542 6789999999999999999986 3 499999999999999999
Q ss_pred HHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEECCCCCC-----cc--HHHHHHHHhcCCCCcEEEEeccCCCCCch
Q 044572 341 TVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVVDPPRKG-----LD--SSLVHALQSIGSAERKAKSLSESSSSMVK 413 (457)
Q Consensus 341 Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~DPPR~G-----l~--~~v~~~l~~~~~~~~ivyvs~~~~~c~~~ 413 (457)
|++.++ . +++++++|+.+.... .+.||+|++|||... .. ..+++.+.+.-.+++.++++ |+..
T Consensus 274 n~~~~~---~-~v~~~~~D~~~~~~~-~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv-----~n~~ 343 (381)
T 3dmg_A 274 GLEANA---L-KAQALHSDVDEALTE-EARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLV-----SNPF 343 (381)
T ss_dssp HHHHTT---C-CCEEEECSTTTTSCT-TCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEE-----ECTT
T ss_pred HHHHcC---C-CeEEEEcchhhcccc-CCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEE-----EcCC
Confidence 998842 2 389999999876532 358999999999753 11 23444444443478888887 7777
Q ss_pred hchhhHHHH
Q 044572 414 EEKRPWILR 422 (457)
Q Consensus 414 ~~~~~~~~~ 422 (457)
.....++..
T Consensus 344 l~~~~~l~~ 352 (381)
T 3dmg_A 344 LKYEPLLEE 352 (381)
T ss_dssp SCHHHHHHH
T ss_pred CChHHHHHH
Confidence 666655544
No 27
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.45 E-value=1.1e-12 Score=120.85 Aligned_cols=130 Identities=15% Similarity=0.130 Sum_probs=94.8
Q ss_pred CCCCCCHHHHHHHHHHHHhh-CCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEE
Q 044572 276 SFGQANTRAFDILLRKLQKY-VPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNIS 354 (457)
Q Consensus 276 ~FfQ~n~~~~~~l~~~i~~~-~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~ 354 (457)
.+|+.+...++.++..+... ..++.+|||+|||+|.+++.++.. ++.+|+|||+++.+++.|++|++ +++
T Consensus 28 ~~~~~~~~~~~~l~~~~~~~~~~~~~~vlD~gcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~--------~~~ 98 (200)
T 1ne2_A 28 EQYPTDASTAAYFLIEIYNDGNIGGRSVIDAGTGNGILACGSYLL-GAESVTAFDIDPDAIETAKRNCG--------GVN 98 (200)
T ss_dssp --CCCCHHHHHHHHHHHHHHTSSBTSEEEEETCTTCHHHHHHHHT-TBSEEEEEESCHHHHHHHHHHCT--------TSE
T ss_pred eecCCCHHHHHHHHHHHHhcCCCCCCEEEEEeCCccHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhcC--------CCE
Confidence 56777888888888776643 236789999999999999999975 56689999999999999999864 578
Q ss_pred EEEccCCcCcccccCCccEEEECCC----CCCccHHHHHHHHhcCCCCcEEEEeccCCCCCchhchhhHHHHHHHhc
Q 044572 355 WHNADNSIEPLSWLVGSDVLVVDPP----RKGLDSSLVHALQSIGSAERKAKSLSESSSSMVKEEKRPWILRAKEAS 427 (457)
Q Consensus 355 ~~~~d~~~~~~~~~~~~D~vi~DPP----R~Gl~~~v~~~l~~~~~~~~ivyvs~~~~~c~~~~~~~~~~~~~~~~~ 427 (457)
++++|+.+.. +.||+|++||| +.+....+++.+.+.. +.+|++ |++.+ ...+...+...+
T Consensus 99 ~~~~d~~~~~----~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~~---g~~~~~-----~~~~~-~~~~~~~~~~~g 162 (200)
T 1ne2_A 99 FMVADVSEIS----GKYDTWIMNPPFGSVVKHSDRAFIDKAFETS---MWIYSI-----GNAKA-RDFLRREFSARG 162 (200)
T ss_dssp EEECCGGGCC----CCEEEEEECCCC-------CHHHHHHHHHHE---EEEEEE-----EEGGG-HHHHHHHHHHHE
T ss_pred EEECcHHHCC----CCeeEEEECCCchhccCchhHHHHHHHHHhc---CcEEEE-----EcCch-HHHHHHHHHHCC
Confidence 9999998742 57999999999 4455556777776664 568887 66543 233334444443
No 28
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.44 E-value=1.2e-13 Score=124.44 Aligned_cols=104 Identities=17% Similarity=0.213 Sum_probs=82.1
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEEC
Q 044572 298 YGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVVD 377 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~D 377 (457)
++.+|||+|||+|.+++.++.. +..+|+|||+++++++.|++|++.+ +..++++++++|+.+.+......||+|++|
T Consensus 31 ~~~~vLDlGcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~--~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~ 107 (177)
T 2esr_A 31 NGGRVLDLFAGSGGLAIEAVSR-GMSAAVLVEKNRKAQAIIQDNIIMT--KAENRFTLLKMEAERAIDCLTGRFDLVFLD 107 (177)
T ss_dssp CSCEEEEETCTTCHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHHTT--TCGGGEEEECSCHHHHHHHBCSCEEEEEEC
T ss_pred CCCeEEEeCCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHc--CCCCceEEEECcHHHhHHhhcCCCCEEEEC
Confidence 6789999999999999999975 5679999999999999999999873 233579999999877543334579999999
Q ss_pred CCCC-CccHHHHHHHH--hcCCCCcEEEEe
Q 044572 378 PPRK-GLDSSLVHALQ--SIGSAERKAKSL 404 (457)
Q Consensus 378 PPR~-Gl~~~v~~~l~--~~~~~~~ivyvs 404 (457)
||+. +...++++.+. ++-.++++++++
T Consensus 108 ~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~ 137 (177)
T 2esr_A 108 PPYAKETIVATIEALAAKNLLSEQVMVVCE 137 (177)
T ss_dssp CSSHHHHHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred CCCCcchHHHHHHHHHhCCCcCCCcEEEEE
Confidence 9973 33445666665 332477888887
No 29
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.44 E-value=8.3e-13 Score=124.05 Aligned_cols=107 Identities=18% Similarity=0.204 Sum_probs=80.7
Q ss_pred eeEEEEECCCCCCCCCHHHHHHHHHHHHhhCCCCCeEEEEccc-ccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhh
Q 044572 266 GGIDISLAPSSFGQANTRAFDILLRKLQKYVPYGASVTDLYAG-AGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSR 344 (457)
Q Consensus 266 ~g~~~~i~~~~FfQ~n~~~~~~l~~~i~~~~~~~~~vLDl~cG-~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~ 344 (457)
.+..|.+++..|+. +..++.++ +...+.++.+|||+||| +|.+++.++... ..+|+|+|+++.+++.|++|++.
T Consensus 27 ~~~~~~~~~~~~~p--~~~~~~l~--~~~~~~~~~~vLDlG~G~~G~~~~~la~~~-~~~v~~vD~s~~~~~~a~~~~~~ 101 (230)
T 3evz_A 27 FGLDIEYHPKGLVT--TPISRYIF--LKTFLRGGEVALEIGTGHTAMMALMAEKFF-NCKVTATEVDEEFFEYARRNIER 101 (230)
T ss_dssp HCCCCCCCTTSCCC--CHHHHHHH--HHTTCCSSCEEEEECCTTTCHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHHHH
T ss_pred cCCceecCCCeEeC--CCchhhhH--hHhhcCCCCEEEEcCCCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHH
Confidence 34556677777774 34445442 33445678999999999 999999999863 35999999999999999999988
Q ss_pred CCCCCCCcEEEEEccCCcCcccccCCccEEEECCCCC
Q 044572 345 LPKSVDGNISWHNADNSIEPLSWLVGSDVLVVDPPRK 381 (457)
Q Consensus 345 ~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~DPPR~ 381 (457)
++ . +++++++|+........+.||+|++|||+.
T Consensus 102 ~~---~-~v~~~~~d~~~~~~~~~~~fD~I~~npp~~ 134 (230)
T 3evz_A 102 NN---S-NVRLVKSNGGIIKGVVEGTFDVIFSAPPYY 134 (230)
T ss_dssp TT---C-CCEEEECSSCSSTTTCCSCEEEEEECCCCC
T ss_pred hC---C-CcEEEeCCchhhhhcccCceeEEEECCCCc
Confidence 42 2 789999997533211126799999999964
No 30
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.43 E-value=6.6e-13 Score=134.92 Aligned_cols=146 Identities=13% Similarity=0.080 Sum_probs=105.2
Q ss_pred eeEEEEECCCCCCCCCHHHHHHHHHHHHhhCC--CCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHh
Q 044572 266 GGIDISLAPSSFGQANTRAFDILLRKLQKYVP--YGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVS 343 (457)
Q Consensus 266 ~g~~~~i~~~~FfQ~n~~~~~~l~~~i~~~~~--~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~ 343 (457)
.++++...++.|.+.+......++ .+.+. .+.+|||+|||+|.+++.+++.....+|+|||+|+.+++.|++|++
T Consensus 191 ~~~~~~~~pg~Fs~~~~d~~~~~l---l~~l~~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~ 267 (375)
T 4dcm_A 191 TDWTIHNHANVFSRTGLDIGARFF---MQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVE 267 (375)
T ss_dssp TTEEEEECTTCTTCSSCCHHHHHH---HHTCCCSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHH
T ss_pred CceEEEeCCCcccCCcccHHHHHH---HHhCcccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHH
Confidence 367888899999997765544333 33333 4689999999999999999987545699999999999999999998
Q ss_pred hCCCCCCCcEEEEEccCCcCcccccCCccEEEECCCCC-------CccHHHHHHHHhcCCCCcEEEEeccCCCCCchhch
Q 044572 344 RLPKSVDGNISWHNADNSIEPLSWLVGSDVLVVDPPRK-------GLDSSLVHALQSIGSAERKAKSLSESSSSMVKEEK 416 (457)
Q Consensus 344 ~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~DPPR~-------Gl~~~v~~~l~~~~~~~~ivyvs~~~~~c~~~~~~ 416 (457)
.++.....+++|+.+|+.+.+. .+.||+|++|||.. ....++++.+.+.-.+++.++++ |+.+...
T Consensus 268 ~ngl~~~~~v~~~~~D~~~~~~--~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv-----~n~~~~~ 340 (375)
T 4dcm_A 268 TNMPEALDRCEFMINNALSGVE--PFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIV-----ANRHLDY 340 (375)
T ss_dssp HHCGGGGGGEEEEECSTTTTCC--TTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEE-----EETTSCH
T ss_pred HcCCCcCceEEEEechhhccCC--CCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEE-----EECCcCH
Confidence 7431111368999999987432 25799999999953 11124556655533478888887 6665555
Q ss_pred hhHHH
Q 044572 417 RPWIL 421 (457)
Q Consensus 417 ~~~~~ 421 (457)
..++.
T Consensus 341 ~~~l~ 345 (375)
T 4dcm_A 341 FHKLK 345 (375)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44443
No 31
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.43 E-value=1.3e-12 Score=123.37 Aligned_cols=103 Identities=14% Similarity=0.004 Sum_probs=81.7
Q ss_pred CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcc--cccCCccEE
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPL--SWLVGSDVL 374 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~--~~~~~~D~v 374 (457)
.++.+|||+|||+|.+++.+|...+..+|+|||+++.+++.|++|++. + .|+.++.+|+.+... .....||+|
T Consensus 73 ~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~---~--~~v~~~~~d~~~~~~~~~~~~~~D~v 147 (230)
T 1fbn_A 73 KRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAE---R--ENIIPILGDANKPQEYANIVEKVDVI 147 (230)
T ss_dssp CTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTT---C--TTEEEEECCTTCGGGGTTTSCCEEEE
T ss_pred CCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhc---C--CCeEEEECCCCCcccccccCccEEEE
Confidence 367899999999999999999875456999999999999999999875 2 689999999976211 112579999
Q ss_pred EECCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 375 VVDPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 375 i~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
+.|++..+....+++.+.+.-.+++.++++
T Consensus 148 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 148 YEDVAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp EECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 999988776667677666443477777774
No 32
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.43 E-value=5.5e-13 Score=128.16 Aligned_cols=149 Identities=15% Similarity=0.058 Sum_probs=103.7
Q ss_pred eeeEEEEECCCCCCCCCHHHHHHHH-HHHHhhCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHh
Q 044572 265 VGGIDISLAPSSFGQANTRAFDILL-RKLQKYVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVS 343 (457)
Q Consensus 265 ~~g~~~~i~~~~FfQ~n~~~~~~l~-~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~ 343 (457)
.+++.+.++|+.||+.+...+..++ +.+...+.++.+|||+|||+|.+++.+++. ++ +|+|+|+++.+++.|++|++
T Consensus 86 ~~~~~~~l~p~~~fgtg~~~tt~~~~~~l~~~~~~~~~VLDiGcG~G~l~~~la~~-g~-~v~gvDi~~~~v~~a~~n~~ 163 (254)
T 2nxc_A 86 GAEIPLVIEPGMAFGTGHHETTRLALKALARHLRPGDKVLDLGTGSGVLAIAAEKL-GG-KALGVDIDPMVLPQAEANAK 163 (254)
T ss_dssp SSSEEEECCCC-----CCSHHHHHHHHHHHHHCCTTCEEEEETCTTSHHHHHHHHT-TC-EEEEEESCGGGHHHHHHHHH
T ss_pred CCceEEEECCCccccCCCCHHHHHHHHHHHHhcCCCCEEEEecCCCcHHHHHHHHh-CC-eEEEEECCHHHHHHHHHHHH
Confidence 4567899999999999866555444 444445567899999999999999999985 44 99999999999999999998
Q ss_pred hCCCCCCCcEEEEEccCCcCcccccCCccEEEECCCCCCccHHHHHHHHhcCCCCcEEEEeccCCCCCchhchhhHHHHH
Q 044572 344 RLPKSVDGNISWHNADNSIEPLSWLVGSDVLVVDPPRKGLDSSLVHALQSIGSAERKAKSLSESSSSMVKEEKRPWILRA 423 (457)
Q Consensus 344 ~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs~~~~~c~~~~~~~~~~~~~ 423 (457)
.+ ... ++++++|+.+.+. ...||+|+.|++...+. .+++.+.++-.+++.++++ .........+...+
T Consensus 164 ~~---~~~-v~~~~~d~~~~~~--~~~fD~Vv~n~~~~~~~-~~l~~~~~~LkpgG~lils-----~~~~~~~~~v~~~l 231 (254)
T 2nxc_A 164 RN---GVR-PRFLEGSLEAALP--FGPFDLLVANLYAELHA-ALAPRYREALVPGGRALLT-----GILKDRAPLVREAM 231 (254)
T ss_dssp HT---TCC-CEEEESCHHHHGG--GCCEEEEEEECCHHHHH-HHHHHHHHHEEEEEEEEEE-----EEEGGGHHHHHHHH
T ss_pred Hc---CCc-EEEEECChhhcCc--CCCCCEEEECCcHHHHH-HHHHHHHHHcCCCCEEEEE-----eeccCCHHHHHHHH
Confidence 84 233 8999999876321 35799999998754433 3445454433477777776 44444556666665
Q ss_pred HHhc
Q 044572 424 KEAS 427 (457)
Q Consensus 424 ~~~~ 427 (457)
.+.+
T Consensus 232 ~~~G 235 (254)
T 2nxc_A 232 AGAG 235 (254)
T ss_dssp HHTT
T ss_pred HHCC
Confidence 5543
No 33
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.43 E-value=3.7e-12 Score=115.35 Aligned_cols=151 Identities=16% Similarity=0.168 Sum_probs=104.2
Q ss_pred EEeeeeEEEEE-CCCCCCCCCH--HHHHHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHH
Q 044572 262 WENVGGIDISL-APSSFGQANT--RAFDILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSF 338 (457)
Q Consensus 262 ~~~~~g~~~~i-~~~~FfQ~n~--~~~~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A 338 (457)
.+.+.+..+.+ ...+||+.+. ..++.+++.+. ..++.+|||+|||+|.+++.++.. ..+|+|+|+++.+++.|
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~vLdiG~G~G~~~~~~~~~--~~~v~~~D~~~~~~~~a 90 (194)
T 1dus_A 15 EDILRGKKLKFKTDSGVFSYGKVDKGTKILVENVV--VDKDDDILDLGCGYGVIGIALADE--VKSTTMADINRRAIKLA 90 (194)
T ss_dssp EEEETTEEEEEEEETTSTTTTSCCHHHHHHHHHCC--CCTTCEEEEETCTTSHHHHHHGGG--SSEEEEEESCHHHHHHH
T ss_pred eeecCCCceEEEeCCCcCCccccchHHHHHHHHcc--cCCCCeEEEeCCCCCHHHHHHHHc--CCeEEEEECCHHHHHHH
Confidence 34455666666 3467777664 45555555432 136789999999999999999986 46999999999999999
Q ss_pred HHHHhhCCCCCCCc--EEEEEccCCcCcccccCCccEEEECCCCCC-c--cHHHHHHHHhcCCCCcEEEEeccCCCCCch
Q 044572 339 EKTVSRLPKSVDGN--ISWHNADNSIEPLSWLVGSDVLVVDPPRKG-L--DSSLVHALQSIGSAERKAKSLSESSSSMVK 413 (457)
Q Consensus 339 ~~Na~~~~~~~~~n--v~~~~~d~~~~~~~~~~~~D~vi~DPPR~G-l--~~~v~~~l~~~~~~~~ivyvs~~~~~c~~~ 413 (457)
++|++.+ ...+ ++++++|+.+... .+.||+|++|||... . ...+++.+.++-.+++.+++. +...
T Consensus 91 ~~~~~~~---~~~~~~~~~~~~d~~~~~~--~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~-----~~~~ 160 (194)
T 1dus_A 91 KENIKLN---NLDNYDIRVVHSDLYENVK--DRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVV-----IQTK 160 (194)
T ss_dssp HHHHHHT---TCTTSCEEEEECSTTTTCT--TSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEE-----EEST
T ss_pred HHHHHHc---CCCccceEEEECchhcccc--cCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEE-----ECCC
Confidence 9999873 2345 9999999987543 357999999999653 1 124455554443467777776 4444
Q ss_pred hchhhHHHHHHHh
Q 044572 414 EEKRPWILRAKEA 426 (457)
Q Consensus 414 ~~~~~~~~~~~~~ 426 (457)
...+.+...+.+.
T Consensus 161 ~~~~~~~~~l~~~ 173 (194)
T 1dus_A 161 QGAKSLAKYMKDV 173 (194)
T ss_dssp HHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHH
Confidence 4444455554444
No 34
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.42 E-value=2.3e-12 Score=119.71 Aligned_cols=118 Identities=9% Similarity=0.059 Sum_probs=86.2
Q ss_pred CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEE
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVV 376 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~ 376 (457)
.++.+|||+|||+|.+++.+|+. ..+|+|||+++++++.|++|++.+ +..++++++++|+.+.+.. ...||+|++
T Consensus 54 ~~~~~vLDlGcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~--g~~~~v~~~~~d~~~~~~~-~~~~D~v~~ 128 (204)
T 3njr_A 54 RRGELLWDIGGGSGSVSVEWCLA--GGRAITIEPRADRIENIQKNIDTY--GLSPRMRAVQGTAPAALAD-LPLPEAVFI 128 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHT--TCTTTEEEEESCTTGGGTT-SCCCSEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHc--CCCCCEEEEeCchhhhccc-CCCCCEEEE
Confidence 46889999999999999999986 459999999999999999999884 2334899999999875433 257999999
Q ss_pred CCCCCCccHHHHHHHHhcCCCCcEEEEeccCCCCCchhchhhHHHHHHHhc
Q 044572 377 DPPRKGLDSSLVHALQSIGSAERKAKSLSESSSSMVKEEKRPWILRAKEAS 427 (457)
Q Consensus 377 DPPR~Gl~~~v~~~l~~~~~~~~ivyvs~~~~~c~~~~~~~~~~~~~~~~~ 427 (457)
++. +..++++.+.+.-.+++.++++ +........+...+++..
T Consensus 129 ~~~---~~~~~l~~~~~~LkpgG~lv~~-----~~~~~~~~~~~~~l~~~g 171 (204)
T 3njr_A 129 GGG---GSQALYDRLWEWLAPGTRIVAN-----AVTLESETLLTQLHARHG 171 (204)
T ss_dssp CSC---CCHHHHHHHHHHSCTTCEEEEE-----ECSHHHHHHHHHHHHHHC
T ss_pred CCc---ccHHHHHHHHHhcCCCcEEEEE-----ecCcccHHHHHHHHHhCC
Confidence 983 3343666666543455555555 333344455555555544
No 35
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.41 E-value=1.5e-12 Score=120.20 Aligned_cols=149 Identities=17% Similarity=0.131 Sum_probs=105.6
Q ss_pred eeEEEEECCCC-CCCCCHHHHHHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhh
Q 044572 266 GGIDISLAPSS-FGQANTRAFDILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSR 344 (457)
Q Consensus 266 ~g~~~~i~~~~-FfQ~n~~~~~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~ 344 (457)
.+..+.+++.. |-+........+++.+.+.+.++.+|||+|||+|.+++.+++. +..+|+|+|+++.+++.|++|++.
T Consensus 27 ~~~~~~~~~~~~f~~~~~~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~ 105 (205)
T 3grz_A 27 DQEIIRLDPGLAFGTGNHQTTQLAMLGIERAMVKPLTVADVGTGSGILAIAAHKL-GAKSVLATDISDESMTAAEENAAL 105 (205)
T ss_dssp TCEEEEESCC-----CCHHHHHHHHHHHHHHCSSCCEEEEETCTTSHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHH
T ss_pred CceeEEecCCcccCCCCCccHHHHHHHHHHhccCCCEEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHH
Confidence 35677788876 4444555666777777776777899999999999999999974 567999999999999999999987
Q ss_pred CCCCCCCcEEEEEccCCcCcccccCCccEEEECCCCCCccHHHHHHHHhcCCCCcEEEEeccCCCCCchhchhhHHHHHH
Q 044572 345 LPKSVDGNISWHNADNSIEPLSWLVGSDVLVVDPPRKGLDSSLVHALQSIGSAERKAKSLSESSSSMVKEEKRPWILRAK 424 (457)
Q Consensus 345 ~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs~~~~~c~~~~~~~~~~~~~~ 424 (457)
+ ...+++++++|+.+.. .+.||+|+++++...+ ..+++.+.++-.+++.++++ +........+...+.
T Consensus 106 ~---~~~~v~~~~~d~~~~~---~~~fD~i~~~~~~~~~-~~~l~~~~~~L~~gG~l~~~-----~~~~~~~~~~~~~~~ 173 (205)
T 3grz_A 106 N---GIYDIALQKTSLLADV---DGKFDLIVANILAEIL-LDLIPQLDSHLNEDGQVIFS-----GIDYLQLPKIEQALA 173 (205)
T ss_dssp T---TCCCCEEEESSTTTTC---CSCEEEEEEESCHHHH-HHHGGGSGGGEEEEEEEEEE-----EEEGGGHHHHHHHHH
T ss_pred c---CCCceEEEeccccccC---CCCceEEEECCcHHHH-HHHHHHHHHhcCCCCEEEEE-----ecCcccHHHHHHHHH
Confidence 4 2345999999997753 3689999999986332 12333333333466777765 444445566666666
Q ss_pred Hhc
Q 044572 425 EAS 427 (457)
Q Consensus 425 ~~~ 427 (457)
+.+
T Consensus 174 ~~G 176 (205)
T 3grz_A 174 ENS 176 (205)
T ss_dssp HTT
T ss_pred HcC
Confidence 554
No 36
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.40 E-value=5.2e-12 Score=116.51 Aligned_cols=121 Identities=11% Similarity=0.044 Sum_probs=91.3
Q ss_pred CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEE
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVV 376 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~ 376 (457)
.++.+|||+|||+|.+++.+|+..+..+|+|||+++++++.|++|++.+ +.++++++++|+.+.+.. ...||+|++
T Consensus 39 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~~~v~~~~~d~~~~~~~-~~~~D~i~~ 114 (204)
T 3e05_A 39 QDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKF---VARNVTLVEAFAPEGLDD-LPDPDRVFI 114 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHH---TCTTEEEEECCTTTTCTT-SCCCSEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHh---CCCcEEEEeCChhhhhhc-CCCCCEEEE
Confidence 4688999999999999999998764579999999999999999999874 237899999999765543 257999999
Q ss_pred CCCCCCccHHHHHHHHhcCCCCcEEEEeccCCCCCchhchhhHHHHHHHhc
Q 044572 377 DPPRKGLDSSLVHALQSIGSAERKAKSLSESSSSMVKEEKRPWILRAKEAS 427 (457)
Q Consensus 377 DPPR~Gl~~~v~~~l~~~~~~~~ivyvs~~~~~c~~~~~~~~~~~~~~~~~ 427 (457)
+.+..... .+++.+.+.-.+++.++++ +........+...+.+.+
T Consensus 115 ~~~~~~~~-~~l~~~~~~LkpgG~l~~~-----~~~~~~~~~~~~~l~~~g 159 (204)
T 3e05_A 115 GGSGGMLE-EIIDAVDRRLKSEGVIVLN-----AVTLDTLTKAVEFLEDHG 159 (204)
T ss_dssp SCCTTCHH-HHHHHHHHHCCTTCEEEEE-----ECBHHHHHHHHHHHHHTT
T ss_pred CCCCcCHH-HHHHHHHHhcCCCeEEEEE-----ecccccHHHHHHHHHHCC
Confidence 99865443 4555555544466666665 444445556666665554
No 37
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.40 E-value=3.2e-13 Score=122.28 Aligned_cols=135 Identities=15% Similarity=0.216 Sum_probs=93.1
Q ss_pred eeEEEEECCCCCCCC-CHHHHHHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhh
Q 044572 266 GGIDISLAPSSFGQA-NTRAFDILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSR 344 (457)
Q Consensus 266 ~g~~~~i~~~~FfQ~-n~~~~~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~ 344 (457)
.|.+|.++++..... .....+.+++.+... .++.+|||+|||+|.+++.++. .++.+|+|||+++.+++.|++|++.
T Consensus 12 ~~~~~~~~~~~~~rp~~~~~~~~~~~~l~~~-~~~~~vLD~GcG~G~~~~~~~~-~~~~~v~~vD~~~~~~~~a~~~~~~ 89 (187)
T 2fhp_A 12 GGRRLKALDGDNTRPTTDKVKESIFNMIGPY-FDGGMALDLYSGSGGLAIEAVS-RGMDKSICIEKNFAALKVIKENIAI 89 (187)
T ss_dssp TTCBCCCCCCCSSCCCCHHHHHHHHHHHCSC-CSSCEEEETTCTTCHHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHH
T ss_pred cCccccCCCCCCcCcCHHHHHHHHHHHHHhh-cCCCCEEEeCCccCHHHHHHHH-cCCCEEEEEECCHHHHHHHHHHHHH
Confidence 355555555443322 233444444433222 2578999999999999999887 4567999999999999999999987
Q ss_pred CCCCCCCcEEEEEccCCcCcccc---cCCccEEEECCCCC-CccHHHHHHHHh--cCCCCcEEEEe
Q 044572 345 LPKSVDGNISWHNADNSIEPLSW---LVGSDVLVVDPPRK-GLDSSLVHALQS--IGSAERKAKSL 404 (457)
Q Consensus 345 ~~~~~~~nv~~~~~d~~~~~~~~---~~~~D~vi~DPPR~-Gl~~~v~~~l~~--~~~~~~ivyvs 404 (457)
+ +..++++++++|+.+..... ...||+|++|||+. +....+++.+.. +-.++++++++
T Consensus 90 ~--~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~ 153 (187)
T 2fhp_A 90 T--KEPEKFEVRKMDANRALEQFYEEKLQFDLVLLDPPYAKQEIVSQLEKMLERQLLTNEAVIVCE 153 (187)
T ss_dssp H--TCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCCGGGCCHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred h--CCCcceEEEECcHHHHHHHHHhcCCCCCEEEECCCCCchhHHHHHHHHHHhcccCCCCEEEEE
Confidence 4 23357999999987744321 35799999999953 444566666632 22367777776
No 38
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.38 E-value=2.2e-13 Score=125.74 Aligned_cols=106 Identities=21% Similarity=0.334 Sum_probs=68.3
Q ss_pred EEECCCCCCCCCHHHHHHHHHHHHhhC---CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCC
Q 044572 270 ISLAPSSFGQANTRAFDILLRKLQKYV---PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLP 346 (457)
Q Consensus 270 ~~i~~~~FfQ~n~~~~~~l~~~i~~~~---~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~ 346 (457)
|.++++.|.. +..++.+++.+.+.+ .++.+|||+|||+|.+++.++......+|+|+|+++.+++.|++|++.+
T Consensus 1 f~~~~~~~~p--~~~~~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~- 77 (215)
T 4dzr_A 1 FEVGPDCLIP--RPDTEVLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERF- 77 (215)
T ss_dssp CBCSGGGGSC--CHHHHHHHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC---------------
T ss_pred CcCCCCccCC--CccHHHHHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHh-
Confidence 3456667764 466788888888765 4678999999999999999998754459999999999999999998863
Q ss_pred CCCCCcEEEEEccCCcCccc---ccCCccEEEECCCCC
Q 044572 347 KSVDGNISWHNADNSIEPLS---WLVGSDVLVVDPPRK 381 (457)
Q Consensus 347 ~~~~~nv~~~~~d~~~~~~~---~~~~~D~vi~DPPR~ 381 (457)
.. +++++++|+.+.+.. ..+.||+|++|||+.
T Consensus 78 --~~-~~~~~~~d~~~~~~~~~~~~~~fD~i~~npp~~ 112 (215)
T 4dzr_A 78 --GA-VVDWAAADGIEWLIERAERGRPWHAIVSNPPYI 112 (215)
T ss_dssp --------CCHHHHHHHHHHHHHTTCCBSEEEECCCCC
T ss_pred --CC-ceEEEEcchHhhhhhhhhccCcccEEEECCCCC
Confidence 22 789999998773322 126899999999974
No 39
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.38 E-value=4.3e-12 Score=121.95 Aligned_cols=121 Identities=17% Similarity=0.138 Sum_probs=87.0
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccc-cCCccEEEE
Q 044572 298 YGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSW-LVGSDVLVV 376 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~-~~~~D~vi~ 376 (457)
++.+|||+|||+|.+++.+|... ..+|+|||+++.+++.|++|++.+ +..++++++++|+.+....+ .+.||+|++
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~-~~~v~gvDi~~~~~~~a~~n~~~~--~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~ 125 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRT-KAKIVGVEIQERLADMAKRSVAYN--QLEDQIEIIEYDLKKITDLIPKERADIVTC 125 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTC-CCEEEEECCSHHHHHHHHHHHHHT--TCTTTEEEECSCGGGGGGTSCTTCEEEEEE
T ss_pred CCCEEEEcCCchhHHHHHHHHhc-CCcEEEEECCHHHHHHHHHHHHHC--CCcccEEEEECcHHHhhhhhccCCccEEEE
Confidence 68899999999999999999864 349999999999999999999984 33457999999998765433 367999999
Q ss_pred CCCCCCc-----c-----------------HHHHHHHHhcCCCCcEEEEeccCCCCCchhchhhHHHHHHHhc
Q 044572 377 DPPRKGL-----D-----------------SSLVHALQSIGSAERKAKSLSESSSSMVKEEKRPWILRAKEAS 427 (457)
Q Consensus 377 DPPR~Gl-----~-----------------~~v~~~l~~~~~~~~ivyvs~~~~~c~~~~~~~~~~~~~~~~~ 427 (457)
|||+... . ..+++.+..+-.+++.+++. + +.....+++..+....
T Consensus 126 npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~-----~-~~~~~~~~~~~l~~~~ 192 (259)
T 3lpm_A 126 NPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFV-----H-RPERLLDIIDIMRKYR 192 (259)
T ss_dssp CCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEE-----E-CTTTHHHHHHHHHHTT
T ss_pred CCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEE-----E-cHHHHHHHHHHHHHCC
Confidence 9997432 1 13455554433456666664 3 2334555666665543
No 40
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.36 E-value=9.7e-12 Score=115.76 Aligned_cols=123 Identities=11% Similarity=-0.058 Sum_probs=92.6
Q ss_pred CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccc-cCCccEEE
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSW-LVGSDVLV 375 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~-~~~~D~vi 375 (457)
.++.+|||+|||+|.+++.+|......+|+|||+++.+++.|++|++.+ +..|++++++|+.+..... .+.||+|+
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~---~~~~v~~~~~d~~~~~~~~~~~~~D~i~ 116 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEV---GVPNIKLLWVDGSDLTDYFEDGEIDRLY 116 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHH---CCSSEEEEECCSSCGGGTSCTTCCSEEE
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHc---CCCCEEEEeCCHHHHHhhcCCCCCCEEE
Confidence 3578999999999999999998754569999999999999999999873 2368999999998743212 25699999
Q ss_pred ECCCCC----------CccHHHHHHHHhcCCCCcEEEEeccCCCCCchhchhhHHHHHHHhc
Q 044572 376 VDPPRK----------GLDSSLVHALQSIGSAERKAKSLSESSSSMVKEEKRPWILRAKEAS 427 (457)
Q Consensus 376 ~DPPR~----------Gl~~~v~~~l~~~~~~~~ivyvs~~~~~c~~~~~~~~~~~~~~~~~ 427 (457)
+++|-. .....+++.+...-.+++.++++ +......+...+.+...+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~-----~~~~~~~~~~~~~~~~~g 173 (214)
T 1yzh_A 117 LNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFK-----TDNRGLFEYSLVSFSQYG 173 (214)
T ss_dssp EESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEE-----ESCHHHHHHHHHHHHHHT
T ss_pred EECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEE-----eCCHHHHHHHHHHHHHCC
Confidence 998832 12356777777755588888887 655555555555555543
No 41
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=99.35 E-value=4.7e-13 Score=136.72 Aligned_cols=105 Identities=18% Similarity=0.232 Sum_probs=81.2
Q ss_pred ECCC-CCCCCCHHHHHHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCC
Q 044572 272 LAPS-SFGQANTRAFDILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVD 350 (457)
Q Consensus 272 i~~~-~FfQ~n~~~~~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~ 350 (457)
+++. ++.|..++....... ..+.+|.+|||+|||+|.+++.+|+. +.+|+|||+|+.+++.|++|++.+.+ +.
T Consensus 69 ~p~~~~~eQat~e~vA~~~a---~~l~~g~~VLDLgcG~G~~al~LA~~--g~~V~~VD~s~~~l~~Ar~N~~~~~~-gl 142 (410)
T 3ll7_A 69 IPSRLSLEQSSGAVTSSYKS---RFIREGTKVVDLTGGLGIDFIALMSK--ASQGIYIERNDETAVAARHNIPLLLN-EG 142 (410)
T ss_dssp CCCHHHHHHSCCHHHHHHGG---GGSCTTCEEEESSCSSSHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHSC-TT
T ss_pred cCCCCChhhcCHHHHHHHHH---HhcCCCCEEEEeCCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHhHHHhcc-CC
Confidence 4555 788887766544322 33445899999999999999999975 45999999999999999999987411 23
Q ss_pred CcEEEEEccCCcCcccc-cCCccEEEECCCCCC
Q 044572 351 GNISWHNADNSIEPLSW-LVGSDVLVVDPPRKG 382 (457)
Q Consensus 351 ~nv~~~~~d~~~~~~~~-~~~~D~vi~DPPR~G 382 (457)
++++++++|+.+.+... ...||+|++||||.+
T Consensus 143 ~~i~~i~~Da~~~L~~~~~~~fDvV~lDPPrr~ 175 (410)
T 3ll7_A 143 KDVNILTGDFKEYLPLIKTFHPDYIYVDPARRS 175 (410)
T ss_dssp CEEEEEESCGGGSHHHHHHHCCSEEEECCEEC-
T ss_pred CcEEEEECcHHHhhhhccCCCceEEEECCCCcC
Confidence 68999999998865432 247999999999865
No 42
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.35 E-value=7.6e-12 Score=113.40 Aligned_cols=85 Identities=13% Similarity=-0.019 Sum_probs=67.5
Q ss_pred HHHhhCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCC
Q 044572 291 KLQKYVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVG 370 (457)
Q Consensus 291 ~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~ 370 (457)
.+...+.++.+|||+|||+|.+++.+|+. ..+|+|||+|+++++.|++|++.+ +.++++++++|+........+.
T Consensus 15 ~l~~~~~~~~~vLDiGcG~G~~~~~la~~--~~~v~~vD~s~~~l~~a~~~~~~~---~~~~v~~~~~~~~~l~~~~~~~ 89 (185)
T 3mti_A 15 FLAEVLDDESIVVDATMGNGNDTAFLAGL--SKKVYAFDVQEQALGKTSQRLSDL---GIENTELILDGHENLDHYVREP 89 (185)
T ss_dssp HHHTTCCTTCEEEESCCTTSHHHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHH---TCCCEEEEESCGGGGGGTCCSC
T ss_pred HHHHhCCCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHc---CCCcEEEEeCcHHHHHhhccCC
Confidence 33445567899999999999999999976 469999999999999999999874 2378999997776532222357
Q ss_pred ccEEEECCCC
Q 044572 371 SDVLVVDPPR 380 (457)
Q Consensus 371 ~D~vi~DPPR 380 (457)
||+|++|++.
T Consensus 90 fD~v~~~~~~ 99 (185)
T 3mti_A 90 IRAAIFNLGY 99 (185)
T ss_dssp EEEEEEEEC-
T ss_pred cCEEEEeCCC
Confidence 9999999653
No 43
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.33 E-value=3.9e-12 Score=122.58 Aligned_cols=120 Identities=17% Similarity=0.166 Sum_probs=85.7
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhh---CCCCCCCcEEEEEccCCcCccc-----c-c
Q 044572 298 YGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSR---LPKSVDGNISWHNADNSIEPLS-----W-L 368 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~---~~~~~~~nv~~~~~d~~~~~~~-----~-~ 368 (457)
++.+|||+|||+|.+++.+|.+....+|+|||+++.+++.|++|++. + +..++++++++|+.+.... + .
T Consensus 36 ~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~--~l~~~v~~~~~D~~~~~~~~~~~~~~~ 113 (260)
T 2ozv_A 36 RACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNA--AFSARIEVLEADVTLRAKARVEAGLPD 113 (260)
T ss_dssp SCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGT--TTGGGEEEEECCTTCCHHHHHHTTCCT
T ss_pred CCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhC--CCcceEEEEeCCHHHHhhhhhhhccCC
Confidence 57899999999999999999875456999999999999999999876 4 2334799999999876321 1 3
Q ss_pred CCccEEEECCCCCCc--------------------cHHHHHHHHhcCCCCcEEEEeccCCCCCchhchhhHHHHHHH
Q 044572 369 VGSDVLVVDPPRKGL--------------------DSSLVHALQSIGSAERKAKSLSESSSSMVKEEKRPWILRAKE 425 (457)
Q Consensus 369 ~~~D~vi~DPPR~Gl--------------------~~~v~~~l~~~~~~~~ivyvs~~~~~c~~~~~~~~~~~~~~~ 425 (457)
..||+|++|||+... ...+++.+..+-.+++.+++. .. .....+++..+++
T Consensus 114 ~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~-----~~-~~~~~~~~~~l~~ 184 (260)
T 2ozv_A 114 EHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLI-----SR-PQSVAEIIAACGS 184 (260)
T ss_dssp TCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEE-----EC-GGGHHHHHHHHTT
T ss_pred CCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEE-----Ec-HHHHHHHHHHHHh
Confidence 579999999997532 123455544433466666664 33 3345556666554
No 44
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.33 E-value=7.1e-12 Score=127.19 Aligned_cols=125 Identities=17% Similarity=0.150 Sum_probs=92.6
Q ss_pred CHHHHHHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccC
Q 044572 281 NTRAFDILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADN 360 (457)
Q Consensus 281 n~~~~~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~ 360 (457)
+...+..|+..+ ..++.+|||+|||+|++++.+|......+|+|+|+|+.+++.|++|++.+ +..++++++++|+
T Consensus 203 ~~~la~~l~~~~---~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~--gl~~~i~~~~~D~ 277 (373)
T 3tm4_A 203 KASIANAMIELA---ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAA--GVLDKIKFIQGDA 277 (373)
T ss_dssp CHHHHHHHHHHH---TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHT--TCGGGCEEEECCG
T ss_pred cHHHHHHHHHhh---cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHc--CCCCceEEEECCh
Confidence 345555555554 35688999999999999999998643348999999999999999999884 3336899999999
Q ss_pred CcCcccccCCccEEEECCCCC---Cc-------cHHHHHHHHhcCCCCcEEEEeccCCCCCchhchh
Q 044572 361 SIEPLSWLVGSDVLVVDPPRK---GL-------DSSLVHALQSIGSAERKAKSLSESSSSMVKEEKR 417 (457)
Q Consensus 361 ~~~~~~~~~~~D~vi~DPPR~---Gl-------~~~v~~~l~~~~~~~~ivyvs~~~~~c~~~~~~~ 417 (457)
.+.... .+.||+||+|||+. |- -..+.+.+.+.. .++++|++ |++....+
T Consensus 278 ~~~~~~-~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l-~g~~~~i~-----~~~~~~~~ 337 (373)
T 3tm4_A 278 TQLSQY-VDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL-EKRGVFIT-----TEKKAIEE 337 (373)
T ss_dssp GGGGGT-CSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE-EEEEEEEE-----SCHHHHHH
T ss_pred hhCCcc-cCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc-CCeEEEEE-----CCHHHHHH
Confidence 875422 35799999999953 21 134556666644 68889998 76554443
No 45
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.33 E-value=1.2e-11 Score=116.63 Aligned_cols=102 Identities=17% Similarity=0.016 Sum_probs=78.7
Q ss_pred CCCCeEEEEcccccHHHHHHHhhC-CCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCc--ccccCCccE
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAAR-KCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEP--LSWLVGSDV 373 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~-~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~--~~~~~~~D~ 373 (457)
.++.+|||+|||+|.+++.+++.. +..+|+|||+++.|++.+.++++.+ .|++++++|+.+.. ......||+
T Consensus 76 ~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~-----~~v~~~~~d~~~~~~~~~~~~~~D~ 150 (233)
T 2ipx_A 76 KPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR-----TNIIPVIEDARHPHKYRMLIAMVDV 150 (233)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC-----TTEEEECSCTTCGGGGGGGCCCEEE
T ss_pred CCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc-----CCeEEEEcccCChhhhcccCCcEEE
Confidence 368899999999999999999864 2359999999999999999999872 57999999998732 222357999
Q ss_pred EEECCCCCCccHHHHH-HHHhcCCCCcEEEEe
Q 044572 374 LVVDPPRKGLDSSLVH-ALQSIGSAERKAKSL 404 (457)
Q Consensus 374 vi~DPPR~Gl~~~v~~-~l~~~~~~~~ivyvs 404 (457)
|++|+|.......++. ....++ +++.++++
T Consensus 151 V~~~~~~~~~~~~~~~~~~~~Lk-pgG~l~i~ 181 (233)
T 2ipx_A 151 IFADVAQPDQTRIVALNAHTFLR-NGGHFVIS 181 (233)
T ss_dssp EEECCCCTTHHHHHHHHHHHHEE-EEEEEEEE
T ss_pred EEEcCCCccHHHHHHHHHHHHcC-CCeEEEEE
Confidence 9999994332233454 444454 78888887
No 46
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.32 E-value=1.5e-11 Score=116.21 Aligned_cols=96 Identities=20% Similarity=0.218 Sum_probs=77.9
Q ss_pred HHHHhhCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccC
Q 044572 290 RKLQKYVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLV 369 (457)
Q Consensus 290 ~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~ 369 (457)
+.+.+++.++.+|||+|||+|.+++.+|+...+.+|+|+|+++.+++.|++|++.+ +..++++++.+|+.+.+.. ..
T Consensus 13 ~~i~~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~--gl~~~I~~~~gD~l~~~~~-~~ 89 (230)
T 3lec_A 13 QKVANYVPKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEH--GLTSKIDVRLANGLSAFEE-AD 89 (230)
T ss_dssp HHHHTTSCTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHT--TCTTTEEEEECSGGGGCCG-GG
T ss_pred HHHHHhCCCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc--CCCCcEEEEECchhhcccc-cc
Confidence 45667788899999999999999999998655678999999999999999999985 3456799999999876532 13
Q ss_pred CccEEEECCCCCCccHHHHHHHH
Q 044572 370 GSDVLVVDPPRKGLDSSLVHALQ 392 (457)
Q Consensus 370 ~~D~vi~DPPR~Gl~~~v~~~l~ 392 (457)
.||+|++ +|+..+++..+.
T Consensus 90 ~~D~Ivi----aGmGg~lI~~IL 108 (230)
T 3lec_A 90 NIDTITI----CGMGGRLIADIL 108 (230)
T ss_dssp CCCEEEE----EEECHHHHHHHH
T ss_pred ccCEEEE----eCCchHHHHHHH
Confidence 6999887 677776555544
No 47
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.32 E-value=1.6e-11 Score=121.45 Aligned_cols=84 Identities=19% Similarity=0.151 Sum_probs=69.5
Q ss_pred CCCCeEEEEcccccHHHHHHHhhC-CCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccc--cCCccE
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAAR-KCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSW--LVGSDV 373 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~-~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~--~~~~D~ 373 (457)
.+|++|||+|||+|..++.+|... +..+|+|+|+++.+++.+++|++.+ +..|++++++|+.+..... ...||.
T Consensus 101 ~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~---g~~~v~~~~~D~~~~~~~~~~~~~fD~ 177 (309)
T 2b9e_A 101 PPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARA---GVSCCELAEEDFLAVSPSDPRYHEVHY 177 (309)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHT---TCCSEEEEECCGGGSCTTCGGGTTEEE
T ss_pred CCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHc---CCCeEEEEeCChHhcCccccccCCCCE
Confidence 478999999999999999999753 3469999999999999999999984 3468999999987754321 147999
Q ss_pred EEECCCCCCc
Q 044572 374 LVVDPPRKGL 383 (457)
Q Consensus 374 vi~DPPR~Gl 383 (457)
|++|||.+|.
T Consensus 178 Vl~D~PcSg~ 187 (309)
T 2b9e_A 178 ILLDPSCSGS 187 (309)
T ss_dssp EEECCCCCC-
T ss_pred EEEcCCcCCC
Confidence 9999998654
No 48
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.32 E-value=1.6e-12 Score=123.00 Aligned_cols=106 Identities=15% Similarity=0.224 Sum_probs=84.8
Q ss_pred ECCCCCCCCCHHH-HHHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCC
Q 044572 272 LAPSSFGQANTRA-FDILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVD 350 (457)
Q Consensus 272 i~~~~FfQ~n~~~-~~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~ 350 (457)
+++.+|||.+... .+.+...+.... ++.+|||+|||+|.+++.+|... .+|+|||+|+.+++.|++|++.+ +..
T Consensus 52 ~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~vLD~gcG~G~~~~~la~~~--~~v~~vD~s~~~~~~a~~~~~~~--~~~ 126 (241)
T 3gdh_A 52 LDREGWFSVTPEKIAEHIAGRVSQSF-KCDVVVDAFCGVGGNTIQFALTG--MRVIAIDIDPVKIALARNNAEVY--GIA 126 (241)
T ss_dssp CCHHHHHHCCCHHHHHHHHHHHHHHS-CCSEEEETTCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHT--TCG
T ss_pred ecccceeecCHHHHHHHHHHHhhhcc-CCCEEEECccccCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHc--CCC
Confidence 3567888888764 555555555543 68999999999999999999863 69999999999999999999874 222
Q ss_pred CcEEEEEccCCcCcccccCCccEEEECCCCCCcc
Q 044572 351 GNISWHNADNSIEPLSWLVGSDVLVVDPPRKGLD 384 (457)
Q Consensus 351 ~nv~~~~~d~~~~~~~~~~~~D~vi~DPPR~Gl~ 384 (457)
.+++++++|+.+... ...||+|++|||..+..
T Consensus 127 ~~~~~~~~d~~~~~~--~~~~D~v~~~~~~~~~~ 158 (241)
T 3gdh_A 127 DKIEFICGDFLLLAS--FLKADVVFLSPPWGGPD 158 (241)
T ss_dssp GGEEEEESCHHHHGG--GCCCSEEEECCCCSSGG
T ss_pred cCeEEEECChHHhcc--cCCCCEEEECCCcCCcc
Confidence 589999999987542 36899999999987644
No 49
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.32 E-value=1.7e-11 Score=115.49 Aligned_cols=96 Identities=16% Similarity=0.164 Sum_probs=75.9
Q ss_pred HHHHhhCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccC
Q 044572 290 RKLQKYVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLV 369 (457)
Q Consensus 290 ~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~ 369 (457)
+.+.+++.++.+|||+|||+|.+++.+|....+.+|+|+|+++.+++.|++|++.+ +..++++++.+|+.+.+.. ..
T Consensus 7 ~~l~~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~--gl~~~i~~~~~d~l~~l~~-~~ 83 (225)
T 3kr9_A 7 ELVASFVSQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAH--GLKEKIQVRLANGLAAFEE-TD 83 (225)
T ss_dssp HHHHTTSCTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHT--TCTTTEEEEECSGGGGCCG-GG
T ss_pred HHHHHhCCCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc--CCCceEEEEECchhhhccc-Cc
Confidence 55667787889999999999999999998655678999999999999999999984 3445799999998765432 12
Q ss_pred CccEEEECCCCCCccHHHHHHHH
Q 044572 370 GSDVLVVDPPRKGLDSSLVHALQ 392 (457)
Q Consensus 370 ~~D~vi~DPPR~Gl~~~v~~~l~ 392 (457)
.||+|++ +|+..+++..+.
T Consensus 84 ~~D~Ivi----aG~Gg~~i~~Il 102 (225)
T 3kr9_A 84 QVSVITI----AGMGGRLIARIL 102 (225)
T ss_dssp CCCEEEE----EEECHHHHHHHH
T ss_pred CCCEEEE----cCCChHHHHHHH
Confidence 6998887 466665544443
No 50
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.32 E-value=1.5e-11 Score=117.18 Aligned_cols=122 Identities=13% Similarity=0.159 Sum_probs=88.2
Q ss_pred HHHHhhCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccC
Q 044572 290 RKLQKYVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLV 369 (457)
Q Consensus 290 ~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~ 369 (457)
+.+.+++.++.+|||+|||+|.+++.+|+...+.+|+|+|+++.+++.|++|++.+ +..++++++.+|+.+.+.. ..
T Consensus 13 ~~i~~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~--gl~~~I~v~~gD~l~~~~~-~~ 89 (244)
T 3gnl_A 13 EKVASYITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSS--GLTEQIDVRKGNGLAVIEK-KD 89 (244)
T ss_dssp HHHHTTCCSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHT--TCTTTEEEEECSGGGGCCG-GG
T ss_pred HHHHHhCCCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc--CCCceEEEEecchhhccCc-cc
Confidence 55677788899999999999999999998655678999999999999999999984 3445799999999876532 12
Q ss_pred CccEEEECCCCCCccHHHHHHHHhcC----CCCcEEEEeccCCCCCchhchhhHHHH
Q 044572 370 GSDVLVVDPPRKGLDSSLVHALQSIG----SAERKAKSLSESSSSMVKEEKRPWILR 422 (457)
Q Consensus 370 ~~D~vi~DPPR~Gl~~~v~~~l~~~~----~~~~ivyvs~~~~~c~~~~~~~~~~~~ 422 (457)
.||+|++ +|+..+++..+..-. .+...+.++. -......+.|+..
T Consensus 90 ~~D~Ivi----agmGg~lI~~IL~~~~~~L~~~~~lIlq~----~~~~~~lr~~L~~ 138 (244)
T 3gnl_A 90 AIDTIVI----AGMGGTLIRTILEEGAAKLAGVTKLILQP----NIAAWQLREWSEQ 138 (244)
T ss_dssp CCCEEEE----EEECHHHHHHHHHHTGGGGTTCCEEEEEE----SSCHHHHHHHHHH
T ss_pred cccEEEE----eCCchHHHHHHHHHHHHHhCCCCEEEEEc----CCChHHHHHHHHH
Confidence 5999887 677776555544321 2333344431 2234455666554
No 51
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.31 E-value=3.5e-12 Score=132.30 Aligned_cols=85 Identities=24% Similarity=0.115 Sum_probs=70.9
Q ss_pred CCCCeEEEEcccccHHHHHHHhhC-CCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEE
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAAR-KCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLV 375 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~-~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi 375 (457)
.++++|||+|||+|..++.+|... +..+|+|+|+++.+++.+++|++.+ +..|+.++++|+.+....+.+.||+|+
T Consensus 104 ~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~---g~~nv~v~~~Da~~l~~~~~~~FD~Il 180 (456)
T 3m4x_A 104 KPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERW---GVSNAIVTNHAPAELVPHFSGFFDRIV 180 (456)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHH---TCSSEEEECCCHHHHHHHHTTCEEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHc---CCCceEEEeCCHHHhhhhccccCCEEE
Confidence 478999999999999999999753 2359999999999999999999984 346899999998765433346799999
Q ss_pred ECCCCCCcc
Q 044572 376 VDPPRKGLD 384 (457)
Q Consensus 376 ~DPPR~Gl~ 384 (457)
+|||.+|..
T Consensus 181 ~DaPCSg~G 189 (456)
T 3m4x_A 181 VDAPCSGEG 189 (456)
T ss_dssp EECCCCCGG
T ss_pred ECCCCCCcc
Confidence 999987654
No 52
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.30 E-value=2.1e-11 Score=111.54 Aligned_cols=84 Identities=14% Similarity=0.092 Sum_probs=69.3
Q ss_pred hCCCCCeEEEEcccccHHHHHHHhhC-CCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccE
Q 044572 295 YVPYGASVTDLYAGAGVIGLSLAAAR-KCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDV 373 (457)
Q Consensus 295 ~~~~~~~vLDl~cG~G~~sl~lA~~~-~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~ 373 (457)
.+.++.+|||+|||+|.+++.+++.. +..+|+|||+++.+++.|++|++.+ +...+++++++|+.+......+.||+
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~~~~~fD~ 96 (197)
T 3eey_A 19 FVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDL--NLIDRVTLIKDGHQNMDKYIDCPVKA 96 (197)
T ss_dssp HCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHT--TCGGGEEEECSCGGGGGGTCCSCEEE
T ss_pred cCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc--CCCCCeEEEECCHHHHhhhccCCceE
Confidence 35578999999999999999999863 2359999999999999999999874 23368999999987754333467999
Q ss_pred EEECCCC
Q 044572 374 LVVDPPR 380 (457)
Q Consensus 374 vi~DPPR 380 (457)
|++|+|.
T Consensus 97 v~~~~~~ 103 (197)
T 3eey_A 97 VMFNLGY 103 (197)
T ss_dssp EEEEESB
T ss_pred EEEcCCc
Confidence 9999976
No 53
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.30 E-value=2.2e-11 Score=122.46 Aligned_cols=104 Identities=18% Similarity=0.187 Sum_probs=78.3
Q ss_pred CCCCeEEEEcccccHHHHHHHhhC-CCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEE
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAAR-KCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLV 375 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~-~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi 375 (457)
.++.+|||+|||+|++++.+|... ...+|+|+|+|+.+++.|++|++.++ .++++|+++|+.+.... ...||+||
T Consensus 202 ~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g---~~~i~~~~~D~~~~~~~-~~~~D~Ii 277 (354)
T 3tma_A 202 RPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASG---LSWIRFLRADARHLPRF-FPEVDRIL 277 (354)
T ss_dssp CTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTT---CTTCEEEECCGGGGGGT-CCCCSEEE
T ss_pred CCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcC---CCceEEEeCChhhCccc-cCCCCEEE
Confidence 367899999999999999999865 33689999999999999999999842 24899999999875432 24689999
Q ss_pred ECCCCC---Ccc-------HHHHHHHHhcC-CCCcEEEEe
Q 044572 376 VDPPRK---GLD-------SSLVHALQSIG-SAERKAKSL 404 (457)
Q Consensus 376 ~DPPR~---Gl~-------~~v~~~l~~~~-~~~~ivyvs 404 (457)
+|||+. +-. ..+++.+.+.- +.+.+++++
T Consensus 278 ~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t 317 (354)
T 3tma_A 278 ANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLT 317 (354)
T ss_dssp ECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEE
T ss_pred ECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 999964 211 34555555543 445555554
No 54
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.29 E-value=5.9e-12 Score=122.31 Aligned_cols=105 Identities=19% Similarity=0.101 Sum_probs=80.4
Q ss_pred CCCCeEEEEcccccHHHHHHHhhC-CCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccc---cCCcc
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAAR-KCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSW---LVGSD 372 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~-~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~---~~~~D 372 (457)
.++.+|||+|||+|.+++.+|... +..+|+|+|+++.+++.+++|++.+ +..|++++++|+.+....+ ...||
T Consensus 82 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~---g~~~v~~~~~D~~~~~~~~~~~~~~fD 158 (274)
T 3ajd_A 82 REDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRM---GVLNTIIINADMRKYKDYLLKNEIFFD 158 (274)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHT---TCCSEEEEESCHHHHHHHHHHTTCCEE
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHh---CCCcEEEEeCChHhcchhhhhccccCC
Confidence 478999999999999999999753 3369999999999999999999984 3458999999987653321 35799
Q ss_pred EEEECCCCCCcc--------------------HHHHHHHHh-cCCCCcEEEEe
Q 044572 373 VLVVDPPRKGLD--------------------SSLVHALQS-IGSAERKAKSL 404 (457)
Q Consensus 373 ~vi~DPPR~Gl~--------------------~~v~~~l~~-~~~~~~ivyvs 404 (457)
+|++|||..|.. .++++.+.+ +++.+.++|.+
T Consensus 159 ~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~st 211 (274)
T 3ajd_A 159 KILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYST 211 (274)
T ss_dssp EEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence 999999988642 344544443 55567778877
No 55
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.28 E-value=1.9e-11 Score=121.13 Aligned_cols=83 Identities=19% Similarity=0.139 Sum_probs=69.6
Q ss_pred CCCCeEEEEcccccHHHHHHHhhCC-CCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEE
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAARK-CRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLV 375 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~~-~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi 375 (457)
.++.+|||+|||+|..++.+|...+ ..+|+|+|+++.+++.+++|++.+ +..|++++++|+.+... ....||+|+
T Consensus 117 ~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~---g~~~v~~~~~D~~~~~~-~~~~fD~Il 192 (315)
T 1ixk_A 117 KPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRL---GVLNVILFHSSSLHIGE-LNVEFDKIL 192 (315)
T ss_dssp CTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHH---TCCSEEEESSCGGGGGG-GCCCEEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHh---CCCeEEEEECChhhccc-ccccCCEEE
Confidence 4789999999999999999997642 368999999999999999999874 34579999999977543 345799999
Q ss_pred ECCCCCCc
Q 044572 376 VDPPRKGL 383 (457)
Q Consensus 376 ~DPPR~Gl 383 (457)
+|||.+|.
T Consensus 193 ~d~Pcsg~ 200 (315)
T 1ixk_A 193 LDAPCTGS 200 (315)
T ss_dssp EECCTTST
T ss_pred EeCCCCCc
Confidence 99997664
No 56
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.27 E-value=8.1e-11 Score=105.40 Aligned_cols=103 Identities=14% Similarity=0.086 Sum_probs=77.9
Q ss_pred CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEE
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVV 376 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~ 376 (457)
.++.+|||+|||+|.+++.++...+..+|+|+|+++.+++.|++|++.+ +..+++ ++++|+.+.+....+.||+|++
T Consensus 24 ~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--~~~~~~-~~~~d~~~~~~~~~~~~D~i~~ 100 (178)
T 3hm2_A 24 KPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINL--GVSDRI-AVQQGAPRAFDDVPDNPDVIFI 100 (178)
T ss_dssp CTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTT--TCTTSE-EEECCTTGGGGGCCSCCSEEEE
T ss_pred cCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHh--CCCCCE-EEecchHhhhhccCCCCCEEEE
Confidence 3678999999999999999998654569999999999999999999874 233488 8899987654432268999999
Q ss_pred CCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 377 DPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 377 DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
+.+... ..+++.+.+.-.+++.++++
T Consensus 101 ~~~~~~--~~~l~~~~~~L~~gG~l~~~ 126 (178)
T 3hm2_A 101 GGGLTA--PGVFAAAWKRLPVGGRLVAN 126 (178)
T ss_dssp CC-TTC--TTHHHHHHHTCCTTCEEEEE
T ss_pred CCcccH--HHHHHHHHHhcCCCCEEEEE
Confidence 987544 34666665544466666665
No 57
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.27 E-value=8.9e-11 Score=110.03 Aligned_cols=103 Identities=14% Similarity=0.018 Sum_probs=76.7
Q ss_pred CCCCeEEEEcccccHHHHHHHhhCC-CCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCc--ccccCCccE
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAARK-CRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEP--LSWLVGSDV 373 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~~-~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~--~~~~~~~D~ 373 (457)
.++.+|||+|||+|.+++.+|+..+ ..+|+|||+++.+++.+++|++. + .|++++++|+.+.. ......||+
T Consensus 72 ~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~---~--~~v~~~~~d~~~~~~~~~~~~~~D~ 146 (227)
T 1g8a_A 72 KPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEE---R--RNIVPILGDATKPEEYRALVPKVDV 146 (227)
T ss_dssp CTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSS---C--TTEEEEECCTTCGGGGTTTCCCEEE
T ss_pred CCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhc---c--CCCEEEEccCCCcchhhcccCCceE
Confidence 3688999999999999999997632 36999999999999999999876 2 58999999998632 122357999
Q ss_pred EEECCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 374 LVVDPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 374 vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
|++|+|.......+++.+.+.-.+++.++++
T Consensus 147 v~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 147 IFEDVAQPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp EEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEECCCCHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 9999995433334345444433366666654
No 58
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.27 E-value=1.4e-11 Score=115.59 Aligned_cols=120 Identities=8% Similarity=-0.061 Sum_probs=90.2
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCccc-c-cCCccEEE
Q 044572 298 YGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLS-W-LVGSDVLV 375 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~-~-~~~~D~vi 375 (457)
++.+|||+|||+|.+++.+|.......|+|||+++.+++.|++|++.+ +..|++++++|+.+.+.. . .+.+|.|+
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~---~l~nv~~~~~Da~~~l~~~~~~~~~d~v~ 110 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEE---GLSNLRVMCHDAVEVLHKMIPDNSLRMVQ 110 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHT---TCSSEEEECSCHHHHHHHHSCTTCEEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHh---CCCcEEEEECCHHHHHHHHcCCCChheEE
Confidence 578999999999999999998765568999999999999999999873 356899999999875332 1 35799888
Q ss_pred EC--CC--CCC------ccHHHHHHHHhcCCCCcEEEEeccCCCCCchhchhhHHHHHHH
Q 044572 376 VD--PP--RKG------LDSSLVHALQSIGSAERKAKSLSESSSSMVKEEKRPWILRAKE 425 (457)
Q Consensus 376 ~D--PP--R~G------l~~~v~~~l~~~~~~~~ivyvs~~~~~c~~~~~~~~~~~~~~~ 425 (457)
++ +| +.. ....+++.+.+.-.+++.++++ |+.....+.+...+..
T Consensus 111 ~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~-----td~~~~~~~~~~~~~~ 165 (218)
T 3dxy_A 111 LFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMA-----TDWEPYAEHMLEVMSS 165 (218)
T ss_dssp EESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEE-----ESCHHHHHHHHHHHHT
T ss_pred EeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEE-----eCCHHHHHHHHHHHHh
Confidence 85 33 222 1235777776644588899998 7766666655555443
No 59
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.26 E-value=1e-11 Score=129.05 Aligned_cols=104 Identities=18% Similarity=0.124 Sum_probs=81.0
Q ss_pred CCCCeEEEEcccccHHHHHHHhhCC-CCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEE
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAARK-CRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLV 375 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~~-~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi 375 (457)
.++.+|||+|||+|..++.+|...+ ..+|+|+|+++.+++.+++|++.++ .. +.++++|+.+......+.||+|+
T Consensus 100 ~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G---~~-v~~~~~Da~~l~~~~~~~FD~Il 175 (464)
T 3m6w_A 100 KPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWG---AP-LAVTQAPPRALAEAFGTYFHRVL 175 (464)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHC---CC-CEEECSCHHHHHHHHCSCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC---Ce-EEEEECCHHHhhhhccccCCEEE
Confidence 4789999999999999999997643 3589999999999999999999843 34 89999998765432346799999
Q ss_pred ECCCCCCcc------------------------HHHHHHHHh-cCCCCcEEEEe
Q 044572 376 VDPPRKGLD------------------------SSLVHALQS-IGSAERKAKSL 404 (457)
Q Consensus 376 ~DPPR~Gl~------------------------~~v~~~l~~-~~~~~~ivyvs 404 (457)
+|||.+|.. .++++.+.. +++.+.++|.+
T Consensus 176 ~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysT 229 (464)
T 3m6w_A 176 LDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYST 229 (464)
T ss_dssp EECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred ECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 999987643 234444443 35567888887
No 60
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.26 E-value=6.3e-11 Score=106.54 Aligned_cols=123 Identities=18% Similarity=0.097 Sum_probs=86.7
Q ss_pred HHHHHHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCC
Q 044572 282 TRAFDILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNS 361 (457)
Q Consensus 282 ~~~~~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~ 361 (457)
+..++.+++.+.....++.+|||+|||+|.+++.+++. . +|+|||+|+.|++. . .+++++++|+.
T Consensus 7 ~~~~~~l~~~l~~~~~~~~~vLD~GcG~G~~~~~l~~~--~-~v~gvD~s~~~~~~------~------~~~~~~~~d~~ 71 (170)
T 3q87_B 7 GEDTYTLMDALEREGLEMKIVLDLGTSTGVITEQLRKR--N-TVVSTDLNIRALES------H------RGGNLVRADLL 71 (170)
T ss_dssp CHHHHHHHHHHHHHTCCSCEEEEETCTTCHHHHHHTTT--S-EEEEEESCHHHHHT------C------SSSCEEECSTT
T ss_pred CccHHHHHHHHHhhcCCCCeEEEeccCccHHHHHHHhc--C-cEEEEECCHHHHhc------c------cCCeEEECChh
Confidence 45667777775442235789999999999999999975 3 99999999999976 1 35789999998
Q ss_pred cCcccccCCccEEEECCCCCCc-----------cHHHHHHHHhcCCCCcEEEEeccCCCCCchhchhhHHHHHHHhc
Q 044572 362 IEPLSWLVGSDVLVVDPPRKGL-----------DSSLVHALQSIGSAERKAKSLSESSSSMVKEEKRPWILRAKEAS 427 (457)
Q Consensus 362 ~~~~~~~~~~D~vi~DPPR~Gl-----------~~~v~~~l~~~~~~~~ivyvs~~~~~c~~~~~~~~~~~~~~~~~ 427 (457)
+.... +.||+|+.|||+.-. ..++++.+.+.. +++.+++. +......+.+..++.+.+
T Consensus 72 ~~~~~--~~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~-----~~~~~~~~~l~~~l~~~g 140 (170)
T 3q87_B 72 CSINQ--ESVDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLL-----VIEANRPKEVLARLEERG 140 (170)
T ss_dssp TTBCG--GGCSEEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEE-----EEGGGCHHHHHHHHHHTT
T ss_pred hhccc--CCCCEEEECCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEE-----EecCCCHHHHHHHHHHCC
Confidence 74332 579999999997521 113444444443 67777776 555555666666666554
No 61
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.26 E-value=5.3e-11 Score=111.37 Aligned_cols=122 Identities=11% Similarity=0.001 Sum_probs=86.4
Q ss_pred CCCCHHHHHHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCC-CCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEE
Q 044572 278 GQANTRAFDILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARK-CRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWH 356 (457)
Q Consensus 278 fQ~n~~~~~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~-~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~ 356 (457)
++........+ ..+... .++.+|||+|||+|.+++.+|+..+ ..+|++||+++.+++.|++|++.+ +..++++++
T Consensus 40 ~~~~~~~~~~l-~~l~~~-~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--~~~~~v~~~ 115 (221)
T 3u81_A 40 MNVGDAKGQIM-DAVIRE-YSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFA--GLQDKVTIL 115 (221)
T ss_dssp GGCCHHHHHHH-HHHHHH-HCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHH--TCGGGEEEE
T ss_pred cccCHHHHHHH-HHHHHh-cCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHc--CCCCceEEE
Confidence 44555554444 444433 2578999999999999999997422 459999999999999999999874 234579999
Q ss_pred EccCCcCccccc-----CCccEEEECCCCCCccH--HHHHHHHhcCCCCcEEEEe
Q 044572 357 NADNSIEPLSWL-----VGSDVLVVDPPRKGLDS--SLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 357 ~~d~~~~~~~~~-----~~~D~vi~DPPR~Gl~~--~v~~~l~~~~~~~~ivyvs 404 (457)
++|+.+.+.... +.||+|++|........ +.++.+..+ .+++++++.
T Consensus 116 ~~d~~~~l~~~~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~~~L-kpgG~lv~~ 169 (221)
T 3u81_A 116 NGASQDLIPQLKKKYDVDTLDMVFLDHWKDRYLPDTLLLEKCGLL-RKGTVLLAD 169 (221)
T ss_dssp ESCHHHHGGGTTTTSCCCCCSEEEECSCGGGHHHHHHHHHHTTCC-CTTCEEEES
T ss_pred ECCHHHHHHHHHHhcCCCceEEEEEcCCcccchHHHHHHHhcccc-CCCeEEEEe
Confidence 999876544433 57999999987654432 233333234 477777775
No 62
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.26 E-value=1.7e-11 Score=128.21 Aligned_cols=83 Identities=17% Similarity=0.139 Sum_probs=69.7
Q ss_pred CCCeEEEEcccccHHHHHHHhhCC-CCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEE
Q 044572 298 YGASVTDLYAGAGVIGLSLAAARK-CRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVV 376 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~~~-~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~ 376 (457)
++.+|||+|||+|..++.+|...+ ..+|+|+|+++.+++.+++|++.+ +..|++++++|+.+........||+|++
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~---g~~nv~~~~~D~~~~~~~~~~~fD~Il~ 193 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRC---GISNVALTHFDGRVFGAAVPEMFDAILL 193 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHH---TCCSEEEECCCSTTHHHHSTTCEEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc---CCCcEEEEeCCHHHhhhhccccCCEEEE
Confidence 689999999999999999998643 369999999999999999999884 3468999999997753223357999999
Q ss_pred CCCCCCc
Q 044572 377 DPPRKGL 383 (457)
Q Consensus 377 DPPR~Gl 383 (457)
|||.+|.
T Consensus 194 D~PcSg~ 200 (479)
T 2frx_A 194 DAPCSGE 200 (479)
T ss_dssp ECCCCCG
T ss_pred CCCcCCc
Confidence 9998764
No 63
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.26 E-value=1.3e-11 Score=119.71 Aligned_cols=140 Identities=15% Similarity=0.094 Sum_probs=90.5
Q ss_pred CCCCCCCHHHHHHHHH----HHHhhC--CCCCeEEEEcccccHHHHHHHhh-CCCCEEEEEeCCHHHHHHHHHHHhhCCC
Q 044572 275 SSFGQANTRAFDILLR----KLQKYV--PYGASVTDLYAGAGVIGLSLAAA-RKCRSVKCVEINKESQLSFEKTVSRLPK 347 (457)
Q Consensus 275 ~~FfQ~n~~~~~~l~~----~i~~~~--~~~~~vLDl~cG~G~~sl~lA~~-~~~~~V~gVE~~~~av~~A~~Na~~~~~ 347 (457)
..|++.+......++. .+.+.+ .++.+|||+|||+|.+++.++.. ....+|+++|+++.+++.|++|++.+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~- 159 (275)
T 1yb2_A 81 MYFGRVIRRNTQIISEIDASYIIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFY- 159 (275)
T ss_dssp GGHHHHC------------------CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTS-
T ss_pred HHHHhhccccccccChhhHHHHHHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcC-
Confidence 4555554444444333 333333 36889999999999999999986 334699999999999999999998730
Q ss_pred CCCCcEEEEEccCCcCcccccCCccEEEECCCCCCccHHHHHHHHhcCCCCcEEEEeccCCCCCchhchhhHHHHHHHh
Q 044572 348 SVDGNISWHNADNSIEPLSWLVGSDVLVVDPPRKGLDSSLVHALQSIGSAERKAKSLSESSSSMVKEEKRPWILRAKEA 426 (457)
Q Consensus 348 ~~~~nv~~~~~d~~~~~~~~~~~~D~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs~~~~~c~~~~~~~~~~~~~~~~ 426 (457)
+.++++++++|+.+.+. .+.||+|++|+|.. ..+++.+.+.-.+++.++++ +.......++...+.+.
T Consensus 160 -g~~~v~~~~~d~~~~~~--~~~fD~Vi~~~~~~---~~~l~~~~~~LkpgG~l~i~-----~~~~~~~~~~~~~l~~~ 227 (275)
T 1yb2_A 160 -DIGNVRTSRSDIADFIS--DQMYDAVIADIPDP---WNHVQKIASMMKPGSVATFY-----LPNFDQSEKTVLSLSAS 227 (275)
T ss_dssp -CCTTEEEECSCTTTCCC--SCCEEEEEECCSCG---GGSHHHHHHTEEEEEEEEEE-----ESSHHHHHHHHHHSGGG
T ss_pred -CCCcEEEEECchhccCc--CCCccEEEEcCcCH---HHHHHHHHHHcCCCCEEEEE-----eCCHHHHHHHHHHHHHC
Confidence 24689999999987432 25799999999853 24556555543466666666 44344445555554443
No 64
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=99.24 E-value=3.8e-12 Score=122.71 Aligned_cols=82 Identities=17% Similarity=0.127 Sum_probs=66.3
Q ss_pred CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCH-------HHHHHHHHHHhhCCCCCCCcEEEEEccCCcCccccc-
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINK-------ESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWL- 368 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~-------~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~- 368 (457)
.++.+|||+|||+|.+++.+|..+ .+|+|||+++ ++++.|++|++.+ +..++++++++|+.+.+..+.
T Consensus 82 ~~~~~VLDlgcG~G~~a~~lA~~g--~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~--~~~~ri~~~~~d~~~~l~~~~~ 157 (258)
T 2r6z_A 82 TAHPTVWDATAGLGRDSFVLASLG--LTVTAFEQHPAVACLLSDGIRRALLNPETQ--DTAARINLHFGNAAEQMPALVK 157 (258)
T ss_dssp GGCCCEEETTCTTCHHHHHHHHTT--CCEEEEECCHHHHHHHHHHHHHHHHSHHHH--HHHTTEEEEESCHHHHHHHHHH
T ss_pred CCcCeEEEeeCccCHHHHHHHHhC--CEEEEEECChhhhHHHHHHHHHHHhHHHhh--CCccCeEEEECCHHHHHHhhhc
Confidence 357899999999999999999853 4899999999 9999999998873 222359999999987654332
Q ss_pred --CCccEEEECCCCCC
Q 044572 369 --VGSDVLVVDPPRKG 382 (457)
Q Consensus 369 --~~~D~vi~DPPR~G 382 (457)
..||+|++|||+..
T Consensus 158 ~~~~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 158 TQGKPDIVYLDPMYPE 173 (258)
T ss_dssp HHCCCSEEEECCCC--
T ss_pred cCCCccEEEECCCCCC
Confidence 57999999999754
No 65
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.24 E-value=2.9e-11 Score=119.79 Aligned_cols=124 Identities=15% Similarity=0.096 Sum_probs=93.5
Q ss_pred EECCCCCCCCCHHHHHHHHHHHHhhC--CCCCeEEEEcccccHHHHHHHhhCC-CCEEEEEeCCHHHHHHHHHHHhhCCC
Q 044572 271 SLAPSSFGQANTRAFDILLRKLQKYV--PYGASVTDLYAGAGVIGLSLAAARK-CRSVKCVEINKESQLSFEKTVSRLPK 347 (457)
Q Consensus 271 ~i~~~~FfQ~n~~~~~~l~~~i~~~~--~~~~~vLDl~cG~G~~sl~lA~~~~-~~~V~gVE~~~~av~~A~~Na~~~~~ 347 (457)
.++..+|||.+. ...++..+.+.+ .++.+|||+|||+|.+++.+|+..+ ..+|+|||+++++++.|++|++.+
T Consensus 48 ~l~~~~f~q~~~--~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~-- 123 (317)
T 1dl5_A 48 SYDDGEEYSTSS--QPSLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERL-- 123 (317)
T ss_dssp EEECSSCEEEEC--CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHT--
T ss_pred cccCCCcceecc--CHHHHHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHc--
Confidence 456788999763 233344444443 3689999999999999999998654 246999999999999999999873
Q ss_pred CCCCcEEEEEccCCcCcccccCCccEEEECCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 348 SVDGNISWHNADNSIEPLSWLVGSDVLVVDPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 348 ~~~~nv~~~~~d~~~~~~~~~~~~D~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
+..+++++.+|+.+.... .+.||+|+++++...+...+.+ .++ ++++++++
T Consensus 124 -g~~~v~~~~~d~~~~~~~-~~~fD~Iv~~~~~~~~~~~~~~---~Lk-pgG~lvi~ 174 (317)
T 1dl5_A 124 -GIENVIFVCGDGYYGVPE-FSPYDVIFVTVGVDEVPETWFT---QLK-EGGRVIVP 174 (317)
T ss_dssp -TCCSEEEEESCGGGCCGG-GCCEEEEEECSBBSCCCHHHHH---HEE-EEEEEEEE
T ss_pred -CCCCeEEEECChhhcccc-CCCeEEEEEcCCHHHHHHHHHH---hcC-CCcEEEEE
Confidence 345799999999875432 3679999999998777654332 444 77788887
No 66
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.24 E-value=1.7e-11 Score=116.93 Aligned_cols=127 Identities=17% Similarity=0.090 Sum_probs=85.6
Q ss_pred CCCCHHHHHHHHHHHHhhCC--CCCeEEEEcccccHHHHHHHhh--CCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCC-c
Q 044572 278 GQANTRAFDILLRKLQKYVP--YGASVTDLYAGAGVIGLSLAAA--RKCRSVKCVEINKESQLSFEKTVSRLPKSVDG-N 352 (457)
Q Consensus 278 fQ~n~~~~~~l~~~i~~~~~--~~~~vLDl~cG~G~~sl~lA~~--~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~-n 352 (457)
.+.....+..++..+.+.+. ++.+|||+|||+|.+++.++.. ....+|+|+|+|+.+++.|++|+..+...... +
T Consensus 29 ~~~~~~la~~l~~~~l~~~~~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~ 108 (250)
T 1o9g_A 29 PAFPVRLATEIFQRALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTAR 108 (250)
T ss_dssp CCCCHHHHHHHHHHHHHTSSCCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHhcccCCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhcccccc
Confidence 33345555667777766543 4679999999999999999976 33358999999999999999998762000111 1
Q ss_pred -------------------------EE-------------EEEccCCcCccc----ccCCccEEEECCCCCCccH-----
Q 044572 353 -------------------------IS-------------WHNADNSIEPLS----WLVGSDVLVVDPPRKGLDS----- 385 (457)
Q Consensus 353 -------------------------v~-------------~~~~d~~~~~~~----~~~~~D~vi~DPPR~Gl~~----- 385 (457)
++ |+++|+.+.... ....||+|+.|||+.....
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~ 188 (250)
T 1o9g_A 109 ELERREQSERFGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQV 188 (250)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCC
T ss_pred chhhhhhhhhcccccchhhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccc
Confidence 66 999998875321 1237999999999643221
Q ss_pred ------HHHHHHHhcCCCCcEEEEe
Q 044572 386 ------SLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 386 ------~v~~~l~~~~~~~~ivyvs 404 (457)
.+++.+.+.-.+++.++++
T Consensus 189 ~~~~~~~~l~~~~~~LkpgG~l~~~ 213 (250)
T 1o9g_A 189 PGQPVAGLLRSLASALPAHAVIAVT 213 (250)
T ss_dssp CHHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred cccHHHHHHHHHHHhcCCCcEEEEe
Confidence 4555554433355555554
No 67
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.23 E-value=3.6e-11 Score=112.42 Aligned_cols=124 Identities=10% Similarity=0.038 Sum_probs=89.7
Q ss_pred CCCCCCHHHHHHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCC-CCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEE
Q 044572 276 SFGQANTRAFDILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARK-CRSVKCVEINKESQLSFEKTVSRLPKSVDGNIS 354 (457)
Q Consensus 276 ~FfQ~n~~~~~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~-~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~ 354 (457)
.+++........+ ..+... .++.+|||+|||+|.+++.+|...+ ..+|++||+++++++.|++|++.+ +..++++
T Consensus 44 ~~~~~~~~~~~~l-~~l~~~-~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--~~~~~v~ 119 (225)
T 3tr6_A 44 YAMQTAPEQAQLL-ALLVKL-MQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKA--GLSDKIG 119 (225)
T ss_dssp GGGSCCHHHHHHH-HHHHHH-HTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHT--TCTTTEE
T ss_pred CccccCHHHHHHH-HHHHHh-hCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHC--CCCCceE
Confidence 4456666555444 444433 2578999999999999999997533 469999999999999999999874 3335699
Q ss_pred EEEccCCcCccccc-----CCccEEEECCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 355 WHNADNSIEPLSWL-----VGSDVLVVDPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 355 ~~~~d~~~~~~~~~-----~~~D~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
++++|+.+.+.... ..||+|++|++...... +++.+..+-.+++++++.
T Consensus 120 ~~~~d~~~~~~~~~~~~~~~~fD~v~~~~~~~~~~~-~l~~~~~~L~pgG~lv~~ 173 (225)
T 3tr6_A 120 LRLSPAKDTLAELIHAGQAWQYDLIYIDADKANTDL-YYEESLKLLREGGLIAVD 173 (225)
T ss_dssp EEESCHHHHHHHHHTTTCTTCEEEEEECSCGGGHHH-HHHHHHHHEEEEEEEEEE
T ss_pred EEeCCHHHHHHHhhhccCCCCccEEEECCCHHHHHH-HHHHHHHhcCCCcEEEEe
Confidence 99999976544332 67999999999655443 444444433467777664
No 68
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.23 E-value=7.9e-11 Score=111.24 Aligned_cols=118 Identities=8% Similarity=0.077 Sum_probs=88.1
Q ss_pred CHHHHHHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccC
Q 044572 281 NTRAFDILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADN 360 (457)
Q Consensus 281 n~~~~~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~ 360 (457)
.......+.. +... .++.+|||+|||+|.+++.+|......+|++||+++++++.|++|++.. +..++++++.+|+
T Consensus 56 ~~~~~~~l~~-~~~~-~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~--~~~~~v~~~~~d~ 131 (232)
T 3ntv_A 56 DRLTLDLIKQ-LIRM-NNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATY--HFENQVRIIEGNA 131 (232)
T ss_dssp CHHHHHHHHH-HHHH-HTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHT--TCTTTEEEEESCG
T ss_pred CHHHHHHHHH-HHhh-cCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc--CCCCcEEEEECCH
Confidence 3444444433 3332 3678999999999999999997434579999999999999999999874 3345899999999
Q ss_pred CcCcc-cccCCccEEEECCCCCCccHHHHHHHHhcCCCCcEEEE
Q 044572 361 SIEPL-SWLVGSDVLVVDPPRKGLDSSLVHALQSIGSAERKAKS 403 (457)
Q Consensus 361 ~~~~~-~~~~~~D~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyv 403 (457)
.+.+. ...+.||+|++|.+...... +++.+.++-.+++++++
T Consensus 132 ~~~~~~~~~~~fD~V~~~~~~~~~~~-~l~~~~~~LkpgG~lv~ 174 (232)
T 3ntv_A 132 LEQFENVNDKVYDMIFIDAAKAQSKK-FFEIYTPLLKHQGLVIT 174 (232)
T ss_dssp GGCHHHHTTSCEEEEEEETTSSSHHH-HHHHHGGGEEEEEEEEE
T ss_pred HHHHHhhccCCccEEEEcCcHHHHHH-HHHHHHHhcCCCeEEEE
Confidence 88765 44468999999998766543 55555544346777766
No 69
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.21 E-value=1.3e-10 Score=117.70 Aligned_cols=103 Identities=13% Similarity=0.060 Sum_probs=77.0
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCccc-ccCCccEEEE
Q 044572 298 YGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLS-WLVGSDVLVV 376 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~-~~~~~D~vi~ 376 (457)
++.+|||+| |+|.+++.++......+|+|||+++.+++.|++|++.++ .++++++++|+.+.+.. ..+.||+||+
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g---~~~v~~~~~D~~~~l~~~~~~~fD~Vi~ 247 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIG---YEDIEIFTFDLRKPLPDYALHKFDTFIT 247 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHT---CCCEEEECCCTTSCCCTTTSSCBSEEEE
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC---CCCEEEEEChhhhhchhhccCCccEEEE
Confidence 578999999 999999999976433699999999999999999998742 34899999999884332 2357999999
Q ss_pred CCCCCCc-cHHHHHHHHh-cCCCCcEEEEe
Q 044572 377 DPPRKGL-DSSLVHALQS-IGSAERKAKSL 404 (457)
Q Consensus 377 DPPR~Gl-~~~v~~~l~~-~~~~~~ivyvs 404 (457)
|||.... ...+++.+.+ +++.+++++++
T Consensus 248 ~~p~~~~~~~~~l~~~~~~LkpgG~~~~~~ 277 (373)
T 2qm3_A 248 DPPETLEAIRAFVGRGIATLKGPRCAGYFG 277 (373)
T ss_dssp CCCSSHHHHHHHHHHHHHTBCSTTCEEEEE
T ss_pred CCCCchHHHHHHHHHHHHHcccCCeEEEEE
Confidence 9997421 1234444444 44345475665
No 70
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.21 E-value=6e-11 Score=116.73 Aligned_cols=104 Identities=14% Similarity=0.140 Sum_probs=77.1
Q ss_pred CCCHHHHHHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEc
Q 044572 279 QANTRAFDILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNA 358 (457)
Q Consensus 279 Q~n~~~~~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~ 358 (457)
..+....+.+++.+. +.++.+|||+|||+|.++..++.. ..+|+|||+++.+++.|++|++.+ ...|++++++
T Consensus 25 l~~~~i~~~i~~~~~--~~~~~~VLDiG~G~G~lt~~La~~--~~~v~~vDi~~~~~~~a~~~~~~~---~~~~v~~~~~ 97 (299)
T 2h1r_A 25 LKNPGILDKIIYAAK--IKSSDIVLEIGCGTGNLTVKLLPL--AKKVITIDIDSRMISEVKKRCLYE---GYNNLEVYEG 97 (299)
T ss_dssp ECCHHHHHHHHHHHC--CCTTCEEEEECCTTSTTHHHHTTT--SSEEEEECSCHHHHHHHHHHHHHT---TCCCEEC---
T ss_pred ecCHHHHHHHHHhcC--CCCcCEEEEEcCcCcHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHc---CCCceEEEEC
Confidence 345556655555432 236889999999999999999975 459999999999999999998763 2368999999
Q ss_pred cCCcCcccccCCccEEEECCCCCCccHHHHHHHH
Q 044572 359 DNSIEPLSWLVGSDVLVVDPPRKGLDSSLVHALQ 392 (457)
Q Consensus 359 d~~~~~~~~~~~~D~vi~DPPR~Gl~~~v~~~l~ 392 (457)
|+.+.. ...||+|+.|||+....+.+.+.+.
T Consensus 98 D~~~~~---~~~~D~Vv~n~py~~~~~~~~~ll~ 128 (299)
T 2h1r_A 98 DAIKTV---FPKFDVCTANIPYKISSPLIFKLIS 128 (299)
T ss_dssp -CCSSC---CCCCSEEEEECCGGGHHHHHHHHHH
T ss_pred chhhCC---cccCCEEEEcCCcccccHHHHHHHh
Confidence 998753 2479999999999887665555553
No 71
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.21 E-value=1.7e-10 Score=110.26 Aligned_cols=120 Identities=8% Similarity=0.002 Sum_probs=86.9
Q ss_pred CCHHHHHHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCC-CCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEc
Q 044572 280 ANTRAFDILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARK-CRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNA 358 (457)
Q Consensus 280 ~n~~~~~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~-~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~ 358 (457)
+..... .++..+... .++.+|||+|||+|..++.+|...+ ..+|++||+++++++.|++|++.+ +..++++++.+
T Consensus 47 ~~~~~~-~~l~~l~~~-~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~--g~~~~v~~~~~ 122 (248)
T 3tfw_A 47 VAANQG-QFLALLVRL-TQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLA--GVDQRVTLREG 122 (248)
T ss_dssp CCHHHH-HHHHHHHHH-HTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHT--TCTTTEEEEES
T ss_pred cCHHHH-HHHHHHHhh-cCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--CCCCcEEEEEc
Confidence 334443 344444433 3678999999999999999997643 469999999999999999999874 33458999999
Q ss_pred cCCcCccccc--CCccEEEECCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 359 DNSIEPLSWL--VGSDVLVVDPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 359 d~~~~~~~~~--~~~D~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
|+.+.+.... ..||+|++|.+...... .++.+.++-.+++++++.
T Consensus 123 d~~~~l~~~~~~~~fD~V~~d~~~~~~~~-~l~~~~~~LkpGG~lv~~ 169 (248)
T 3tfw_A 123 PALQSLESLGECPAFDLIFIDADKPNNPH-YLRWALRYSRPGTLIIGD 169 (248)
T ss_dssp CHHHHHHTCCSCCCCSEEEECSCGGGHHH-HHHHHHHTCCTTCEEEEE
T ss_pred CHHHHHHhcCCCCCeEEEEECCchHHHHH-HHHHHHHhcCCCeEEEEe
Confidence 9977544332 37999999998655433 555555544466766664
No 72
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.20 E-value=1.3e-10 Score=108.46 Aligned_cols=121 Identities=9% Similarity=-0.050 Sum_probs=86.3
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccc-cCCccEEEE
Q 044572 298 YGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSW-LVGSDVLVV 376 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~-~~~~D~vi~ 376 (457)
++.+|||+|||+|.+++.+|......+|+|||+++.+++.|++|++.+ +..|++++++|+.+....+ .+.+|.|++
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~---~~~nv~~~~~d~~~l~~~~~~~~~d~v~~ 114 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDS---EAQNVKLLNIDADTLTDVFEPGEVKRVYL 114 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHS---CCSSEEEECCCGGGHHHHCCTTSCCEEEE
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHc---CCCCEEEEeCCHHHHHhhcCcCCcCEEEE
Confidence 578999999999999999998754569999999999999999999873 3468999999998732111 246898887
Q ss_pred CCCC----------CCccHHHHHHHHhcCCCCcEEEEeccCCCCCchhchhhHHHHHHHh
Q 044572 377 DPPR----------KGLDSSLVHALQSIGSAERKAKSLSESSSSMVKEEKRPWILRAKEA 426 (457)
Q Consensus 377 DPPR----------~Gl~~~v~~~l~~~~~~~~ivyvs~~~~~c~~~~~~~~~~~~~~~~ 426 (457)
+.|- .-....+++.+...-.+++.++++ +............+...
T Consensus 115 ~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~-----td~~~~~~~~~~~~~~~ 169 (213)
T 2fca_A 115 NFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFK-----TDNRGLFEYSLKSFSEY 169 (213)
T ss_dssp ESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEE-----ESCHHHHHHHHHHHHHH
T ss_pred ECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEE-----eCCHHHHHHHHHHHHHC
Confidence 5331 111345666666644477777776 54444444444544444
No 73
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.20 E-value=8.6e-11 Score=110.08 Aligned_cols=125 Identities=15% Similarity=0.033 Sum_probs=91.1
Q ss_pred CCCCCCCHHHHHHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCC-CCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcE
Q 044572 275 SSFGQANTRAFDILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARK-CRSVKCVEINKESQLSFEKTVSRLPKSVDGNI 353 (457)
Q Consensus 275 ~~FfQ~n~~~~~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~-~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv 353 (457)
..+++.+......+ ..+... .++.+|||+|||+|.+++.+|...+ ..+|+++|+++.+++.|++|++.+ +..+++
T Consensus 48 ~~~~~~~~~~~~~l-~~l~~~-~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--g~~~~i 123 (229)
T 2avd_A 48 QGDSMMTCEQAQLL-ANLARL-IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQA--EAEHKI 123 (229)
T ss_dssp TGGGSCCHHHHHHH-HHHHHH-TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHT--TCTTTE
T ss_pred CCCCccCHHHHHHH-HHHHHh-cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHC--CCCCeE
Confidence 45667777766544 444443 3578999999999999999997533 469999999999999999999874 334689
Q ss_pred EEEEccCCcCccccc-----CCccEEEECCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 354 SWHNADNSIEPLSWL-----VGSDVLVVDPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 354 ~~~~~d~~~~~~~~~-----~~~D~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
+++.+|+.+.+..+. ..||+|++|++...... .++.+.++-.+++++++.
T Consensus 124 ~~~~~d~~~~~~~~~~~~~~~~~D~v~~d~~~~~~~~-~l~~~~~~L~pgG~lv~~ 178 (229)
T 2avd_A 124 DLRLKPALETLDELLAAGEAGTFDVAVVDADKENCSA-YYERCLQLLRPGGILAVL 178 (229)
T ss_dssp EEEESCHHHHHHHHHHTTCTTCEEEEEECSCSTTHHH-HHHHHHHHEEEEEEEEEE
T ss_pred EEEEcCHHHHHHHHHhcCCCCCccEEEECCCHHHHHH-HHHHHHHHcCCCeEEEEE
Confidence 999999876543321 57999999999765544 444444433366666663
No 74
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.19 E-value=8e-11 Score=122.37 Aligned_cols=110 Identities=17% Similarity=0.129 Sum_probs=85.5
Q ss_pred CCCCeEEEEcccccHHHHHHHhhCCC-CEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCccccc-CCccEE
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAARKC-RSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWL-VGSDVL 374 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~~~-~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~-~~~D~v 374 (457)
.++.+|||+|||+|..++.+|...+. .+|+|+|+++.+++.+++|++.+ +..|++++++|+.+....+. +.||+|
T Consensus 258 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~---g~~~v~~~~~D~~~~~~~~~~~~fD~V 334 (450)
T 2yxl_A 258 KPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRM---GIKIVKPLVKDARKAPEIIGEEVADKV 334 (450)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHT---TCCSEEEECSCTTCCSSSSCSSCEEEE
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHc---CCCcEEEEEcChhhcchhhccCCCCEE
Confidence 47899999999999999999986433 69999999999999999999984 34689999999987543233 569999
Q ss_pred EECCCCCCcc------------------------HHHHHHHHh-cCCCCcEEEEeccCCCCCchh
Q 044572 375 VVDPPRKGLD------------------------SSLVHALQS-IGSAERKAKSLSESSSSMVKE 414 (457)
Q Consensus 375 i~DPPR~Gl~------------------------~~v~~~l~~-~~~~~~ivyvs~~~~~c~~~~ 414 (457)
++|||..|.. ..+++.+.. +++.+.++|++ |+...
T Consensus 335 l~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~t-----cs~~~ 394 (450)
T 2yxl_A 335 LLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTT-----CSIFK 394 (450)
T ss_dssp EEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEE-----SCCCG
T ss_pred EEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe-----CCCCh
Confidence 9999987753 234454444 34567888887 76543
No 75
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.19 E-value=1.1e-10 Score=105.41 Aligned_cols=120 Identities=17% Similarity=0.180 Sum_probs=86.1
Q ss_pred CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEE
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVV 376 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~ 376 (457)
.++.+|||+|||+|.+++.++... .+|+++|+++.+++.|++|++.+ +...+++++++|+.+.+.. ...||+|++
T Consensus 32 ~~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~--~~~~~~~~~~~d~~~~~~~-~~~~D~v~~ 106 (192)
T 1l3i_A 32 GKNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRH--GLGDNVTLMEGDAPEALCK-IPDIDIAVV 106 (192)
T ss_dssp CTTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHT--TCCTTEEEEESCHHHHHTT-SCCEEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHHc--CCCcceEEEecCHHHhccc-CCCCCEEEE
Confidence 468899999999999999999754 69999999999999999999874 2236899999998763222 247999999
Q ss_pred CCCCCCccHHHHHHHHhcCCCCcEEEEeccCCCCCchhchhhHHHHHHHhc
Q 044572 377 DPPRKGLDSSLVHALQSIGSAERKAKSLSESSSSMVKEEKRPWILRAKEAS 427 (457)
Q Consensus 377 DPPR~Gl~~~v~~~l~~~~~~~~ivyvs~~~~~c~~~~~~~~~~~~~~~~~ 427 (457)
+.+...+ ..+++.+.+.-.+++.+++. .........+...+.+.+
T Consensus 107 ~~~~~~~-~~~l~~~~~~l~~gG~l~~~-----~~~~~~~~~~~~~l~~~g 151 (192)
T 1l3i_A 107 GGSGGEL-QEILRIIKDKLKPGGRIIVT-----AILLETKFEAMECLRDLG 151 (192)
T ss_dssp SCCTTCH-HHHHHHHHHTEEEEEEEEEE-----ECBHHHHHHHHHHHHHTT
T ss_pred CCchHHH-HHHHHHHHHhcCCCcEEEEE-----ecCcchHHHHHHHHHHCC
Confidence 9886544 34566655543356555554 222334455555555544
No 76
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.19 E-value=9.6e-11 Score=110.18 Aligned_cols=117 Identities=12% Similarity=0.070 Sum_probs=86.9
Q ss_pred HHHHHHHHHhhCC--CCCeEEEEcccccHHHHHHHhhCC-CCEEEEEeCCHHHHHHHHHHHhhCCCCCC-CcEEEEEccC
Q 044572 285 FDILLRKLQKYVP--YGASVTDLYAGAGVIGLSLAAARK-CRSVKCVEINKESQLSFEKTVSRLPKSVD-GNISWHNADN 360 (457)
Q Consensus 285 ~~~l~~~i~~~~~--~~~~vLDl~cG~G~~sl~lA~~~~-~~~V~gVE~~~~av~~A~~Na~~~~~~~~-~nv~~~~~d~ 360 (457)
...++..+..... ++.+|||+|||+|..++.+|...+ ..+|++||+++++++.|++|++.+ +.. ++++++++|+
T Consensus 41 ~~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--g~~~~~i~~~~gda 118 (221)
T 3dr5_A 41 TGQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREA--GYSPSRVRFLLSRP 118 (221)
T ss_dssp HHHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHT--TCCGGGEEEECSCH
T ss_pred HHHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--CCCcCcEEEEEcCH
Confidence 3455566655543 234999999999999999998532 469999999999999999999884 333 5899999999
Q ss_pred CcCcccc-cCCccEEEECCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 361 SIEPLSW-LVGSDVLVVDPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 361 ~~~~~~~-~~~~D~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
.+.+... .+.||+|++|.+...... .++.+.++-.+++++.+.
T Consensus 119 ~~~l~~~~~~~fD~V~~d~~~~~~~~-~l~~~~~~LkpGG~lv~d 162 (221)
T 3dr5_A 119 LDVMSRLANDSYQLVFGQVSPMDLKA-LVDAAWPLLRRGGALVLA 162 (221)
T ss_dssp HHHGGGSCTTCEEEEEECCCTTTHHH-HHHHHHHHEEEEEEEEET
T ss_pred HHHHHHhcCCCcCeEEEcCcHHHHHH-HHHHHHHHcCCCcEEEEe
Confidence 8766544 468999999998665443 454444433477777763
No 77
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.18 E-value=2.8e-10 Score=110.78 Aligned_cols=138 Identities=15% Similarity=0.078 Sum_probs=92.3
Q ss_pred HHHHHHHHHHhhC--CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeC-CHHHHHHHHHHHhhCC--CCCC-----CcE
Q 044572 284 AFDILLRKLQKYV--PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEI-NKESQLSFEKTVSRLP--KSVD-----GNI 353 (457)
Q Consensus 284 ~~~~l~~~i~~~~--~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~-~~~av~~A~~Na~~~~--~~~~-----~nv 353 (457)
.++.|.+.+.+.. .++.+|||+|||+|.+++.+++. ++.+|+|+|+ ++.+++.|++|++.|. .++. +++
T Consensus 63 ~~~~l~~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~-~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v 141 (281)
T 3bzb_A 63 GARALADTLCWQPELIAGKTVCELGAGAGLVSIVAFLA-GADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASP 141 (281)
T ss_dssp HHHHHHHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHT-TCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCC
T ss_pred HHHHHHHHHHhcchhcCCCeEEEecccccHHHHHHHHc-CCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCe
Confidence 4566667766653 36789999999999999999974 5669999999 8999999999995421 1122 378
Q ss_pred EEEEccCCcCcccc-----cCCccEEEE-CCCCC-CccHHHHHHHHhcCC---C--CcEEEEeccCCCCCchh-----ch
Q 044572 354 SWHNADNSIEPLSW-----LVGSDVLVV-DPPRK-GLDSSLVHALQSIGS---A--ERKAKSLSESSSSMVKE-----EK 416 (457)
Q Consensus 354 ~~~~~d~~~~~~~~-----~~~~D~vi~-DPPR~-Gl~~~v~~~l~~~~~---~--~~ivyvs~~~~~c~~~~-----~~ 416 (457)
+++..|..+..... ...||+||+ |.... .....+++.+..+-. + ++.+|+. +.+.. ..
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~-----~~~~~~~~~~~~ 216 (281)
T 3bzb_A 142 KVVPYRWGDSPDSLQRCTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALVT-----FTHHRPHLAERD 216 (281)
T ss_dssp EEEECCTTSCTHHHHHHHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEE-----ECC--------C
T ss_pred EEEEecCCCccHHHHhhccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEEE-----EEeeecccchhH
Confidence 88876655432221 257999887 88763 223456777766544 5 6766665 44432 24
Q ss_pred hhHHHHHHHhc
Q 044572 417 RPWILRAKEAS 427 (457)
Q Consensus 417 ~~~~~~~~~~~ 427 (457)
..|+..+.+.+
T Consensus 217 ~~~~~~l~~~G 227 (281)
T 3bzb_A 217 LAFFRLVNADG 227 (281)
T ss_dssp THHHHHHHHST
T ss_pred HHHHHHHHhcC
Confidence 56777766654
No 78
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.18 E-value=5.1e-11 Score=121.37 Aligned_cols=94 Identities=19% Similarity=0.171 Sum_probs=74.1
Q ss_pred HHHHHHHHHHhhCC--CCCeEEEEcccccHHHHHHHhhCCC--------------------------------------C
Q 044572 284 AFDILLRKLQKYVP--YGASVTDLYAGAGVIGLSLAAARKC--------------------------------------R 323 (457)
Q Consensus 284 ~~~~l~~~i~~~~~--~~~~vLDl~cG~G~~sl~lA~~~~~--------------------------------------~ 323 (457)
..+.|...++.... ++..|||++||+|+|.+.+|..+.- .
T Consensus 179 l~e~lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~ 258 (385)
T 3ldu_A 179 IRETLAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKF 258 (385)
T ss_dssp CCHHHHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCC
T ss_pred CcHHHHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCc
Confidence 34556666655543 6789999999999999999875311 3
Q ss_pred EEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEECCCCC
Q 044572 324 SVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVVDPPRK 381 (457)
Q Consensus 324 ~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~DPPR~ 381 (457)
+|+|+|+|+.|++.|++|++.+ +..++++|+++|+.+... ...||+||+|||+.
T Consensus 259 ~V~GvDid~~ai~~Ar~Na~~~--gl~~~i~~~~~D~~~l~~--~~~~D~Iv~NPPyg 312 (385)
T 3ldu_A 259 KIYGYDIDEESIDIARENAEIA--GVDEYIEFNVGDATQFKS--EDEFGFIITNPPYG 312 (385)
T ss_dssp CEEEEESCHHHHHHHHHHHHHH--TCGGGEEEEECCGGGCCC--SCBSCEEEECCCCC
T ss_pred eEEEEECCHHHHHHHHHHHHHc--CCCCceEEEECChhhcCc--CCCCcEEEECCCCc
Confidence 6999999999999999999884 333579999999987643 24799999999964
No 79
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.17 E-value=2.3e-10 Score=106.85 Aligned_cols=121 Identities=8% Similarity=0.001 Sum_probs=86.9
Q ss_pred CCCHHHHHHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCC-CCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEE
Q 044572 279 QANTRAFDILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARK-CRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHN 357 (457)
Q Consensus 279 Q~n~~~~~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~-~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~ 357 (457)
+...... .++..+... .++.+|||+|||+|..++.+|...+ ..+|++||+++.+++.|++|++.. +..+++++++
T Consensus 41 ~~~~~~~-~~l~~l~~~-~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--~~~~~v~~~~ 116 (223)
T 3duw_A 41 DVSPTQG-KFLQLLVQI-QGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERA--NLNDRVEVRT 116 (223)
T ss_dssp SCCHHHH-HHHHHHHHH-HTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHT--TCTTTEEEEE
T ss_pred ccCHHHH-HHHHHHHHh-hCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--CCCCcEEEEE
Confidence 3344443 344444433 3578999999999999999998643 359999999999999999999874 3335699999
Q ss_pred ccCCcCccccc----CCccEEEECCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 358 ADNSIEPLSWL----VGSDVLVVDPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 358 ~d~~~~~~~~~----~~~D~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
+|+.+.+..+. ..||+|++|++..... .+++.+.++-.+++++++.
T Consensus 117 ~d~~~~~~~~~~~~~~~fD~v~~d~~~~~~~-~~l~~~~~~L~pgG~lv~~ 166 (223)
T 3duw_A 117 GLALDSLQQIENEKYEPFDFIFIDADKQNNP-AYFEWALKLSRPGTVIIGD 166 (223)
T ss_dssp SCHHHHHHHHHHTTCCCCSEEEECSCGGGHH-HHHHHHHHTCCTTCEEEEE
T ss_pred cCHHHHHHHHHhcCCCCcCEEEEcCCcHHHH-HHHHHHHHhcCCCcEEEEe
Confidence 99976543321 4699999999855433 4555555544577777764
No 80
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.16 E-value=1.9e-10 Score=109.59 Aligned_cols=119 Identities=13% Similarity=0.050 Sum_probs=86.6
Q ss_pred CCCCeEEEEcccccHHHHHHHhh-CCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEE
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAA-RKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLV 375 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~-~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi 375 (457)
.++.+|||+|||+|.+++.++.. ....+|+++|+++++++.|++|++.++ ..++++++++|+.+.+. ...||+|+
T Consensus 92 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~--~~~~D~v~ 167 (255)
T 3mb5_A 92 SPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAG--FDDRVTIKLKDIYEGIE--EENVDHVI 167 (255)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHT--CTTTEEEECSCGGGCCC--CCSEEEEE
T ss_pred CCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcC--CCCceEEEECchhhccC--CCCcCEEE
Confidence 46889999999999999999987 335699999999999999999998742 33459999999986532 24699999
Q ss_pred ECCCCCCccHHHHHHHHhcCCCCcEEEEeccCCCCCchhchhhHHHHHHHhc
Q 044572 376 VDPPRKGLDSSLVHALQSIGSAERKAKSLSESSSSMVKEEKRPWILRAKEAS 427 (457)
Q Consensus 376 ~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs~~~~~c~~~~~~~~~~~~~~~~~ 427 (457)
+|+|.. ..+++.+.+.-.+++.+++. +........+...+++..
T Consensus 168 ~~~~~~---~~~l~~~~~~L~~gG~l~~~-----~~~~~~~~~~~~~l~~~g 211 (255)
T 3mb5_A 168 LDLPQP---ERVVEHAAKALKPGGFFVAY-----TPCSNQVMRLHEKLREFK 211 (255)
T ss_dssp ECSSCG---GGGHHHHHHHEEEEEEEEEE-----ESSHHHHHHHHHHHHHTG
T ss_pred ECCCCH---HHHHHHHHHHcCCCCEEEEE-----ECCHHHHHHHHHHHHHcC
Confidence 999953 23444444433366666665 433444555565555554
No 81
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.16 E-value=1.7e-10 Score=117.42 Aligned_cols=91 Identities=10% Similarity=0.060 Sum_probs=71.6
Q ss_pred HHHHHHHHhhC--CCCCeEEEEcccccHHHHHHHhhCCC--------------------------------------CEE
Q 044572 286 DILLRKLQKYV--PYGASVTDLYAGAGVIGLSLAAARKC--------------------------------------RSV 325 (457)
Q Consensus 286 ~~l~~~i~~~~--~~~~~vLDl~cG~G~~sl~lA~~~~~--------------------------------------~~V 325 (457)
+.|...++.+. .++..|||.+||+|+|.+.+|..+.- .+|
T Consensus 180 e~LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v 259 (384)
T 3ldg_A 180 ENMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDI 259 (384)
T ss_dssp HHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCE
T ss_pred HHHHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceE
Confidence 44445444443 36789999999999999999975321 259
Q ss_pred EEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEECCCC
Q 044572 326 KCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVVDPPR 380 (457)
Q Consensus 326 ~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~DPPR 380 (457)
+|+|+|+.|++.|++|++.+ +..++++|+++|+.+... ...||+||+|||+
T Consensus 260 ~GvDid~~al~~Ar~Na~~~--gl~~~I~~~~~D~~~l~~--~~~fD~Iv~NPPY 310 (384)
T 3ldg_A 260 SGFDFDGRMVEIARKNAREV--GLEDVVKLKQMRLQDFKT--NKINGVLISNPPY 310 (384)
T ss_dssp EEEESCHHHHHHHHHHHHHT--TCTTTEEEEECCGGGCCC--CCCSCEEEECCCC
T ss_pred EEEECCHHHHHHHHHHHHHc--CCCCceEEEECChHHCCc--cCCcCEEEECCch
Confidence 99999999999999999984 344579999999987643 2479999999996
No 82
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.15 E-value=6.1e-11 Score=121.06 Aligned_cols=93 Identities=13% Similarity=0.078 Sum_probs=72.6
Q ss_pred HHHHHHHHHhhC--CCCCeEEEEcccccHHHHHHHhhCCC--------------------------------------CE
Q 044572 285 FDILLRKLQKYV--PYGASVTDLYAGAGVIGLSLAAARKC--------------------------------------RS 324 (457)
Q Consensus 285 ~~~l~~~i~~~~--~~~~~vLDl~cG~G~~sl~lA~~~~~--------------------------------------~~ 324 (457)
.+.|...++... .++..|||++||+|+|.+.+|..+.- .+
T Consensus 186 ~e~lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~ 265 (393)
T 3k0b_A 186 KETMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLN 265 (393)
T ss_dssp CHHHHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCC
T ss_pred cHHHHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCce
Confidence 344555554443 36789999999999999999975321 35
Q ss_pred EEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEECCCCC
Q 044572 325 VKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVVDPPRK 381 (457)
Q Consensus 325 V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~DPPR~ 381 (457)
|+|+|+|+.|++.|++|++.+ +..++++++++|+.+... ...||+||+|||+.
T Consensus 266 V~GvDid~~al~~Ar~Na~~~--gl~~~I~~~~~D~~~~~~--~~~fD~Iv~NPPYg 318 (393)
T 3k0b_A 266 IIGGDIDARLIEIAKQNAVEA--GLGDLITFRQLQVADFQT--EDEYGVVVANPPYG 318 (393)
T ss_dssp EEEEESCHHHHHHHHHHHHHT--TCTTCSEEEECCGGGCCC--CCCSCEEEECCCCC
T ss_pred EEEEECCHHHHHHHHHHHHHc--CCCCceEEEECChHhCCC--CCCCCEEEECCCCc
Confidence 999999999999999999984 334569999999987643 24799999999963
No 83
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.14 E-value=4.1e-10 Score=108.62 Aligned_cols=106 Identities=11% Similarity=0.083 Sum_probs=76.5
Q ss_pred hhCCCCCeEEEEcccccHHHHHHHhhCC--CCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCc
Q 044572 294 KYVPYGASVTDLYAGAGVIGLSLAAARK--CRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGS 371 (457)
Q Consensus 294 ~~~~~~~~vLDl~cG~G~~sl~lA~~~~--~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~ 371 (457)
.++++|.+|||+|||+|.+++.+++..+ ..+|+|||+|+.|++.|+++++.. +...+++|+++|+.+.. .+.+
T Consensus 66 ~~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~--~~~~~v~~~~~D~~~~~---~~~~ 140 (261)
T 4gek_A 66 RFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAY--KAPTPVDVIEGDIRDIA---IENA 140 (261)
T ss_dssp HHCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTS--CCSSCEEEEESCTTTCC---CCSE
T ss_pred HhCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhh--ccCceEEEeeccccccc---cccc
Confidence 3466899999999999999999997532 238999999999999999998864 33468999999998753 2569
Q ss_pred cEEEECCCCCCcc----HHHHHHHHhcCCCCcEEEEe
Q 044572 372 DVLVVDPPRKGLD----SSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 372 D~vi~DPPR~Gl~----~~v~~~l~~~~~~~~ivyvs 404 (457)
|+|++.=--.-+. ..+++.+.+.-.+++++.++
T Consensus 141 d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~ 177 (261)
T 4gek_A 141 SMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLS 177 (261)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEE
Confidence 9988742100011 13455555543467766664
No 84
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.13 E-value=2.6e-10 Score=107.37 Aligned_cols=122 Identities=16% Similarity=0.105 Sum_probs=89.2
Q ss_pred CCCCHHHHHHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEE
Q 044572 278 GQANTRAFDILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHN 357 (457)
Q Consensus 278 fQ~n~~~~~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~ 357 (457)
+.........+...+ .. .++.+|||+|||+|.+++.+|...+..+|+++|+++.+++.|++|++.+ +..++++++.
T Consensus 36 ~~~~~~~~~~l~~~~-~~-~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~--~~~~~v~~~~ 111 (233)
T 2gpy_A 36 PIMDLLGMESLLHLL-KM-AAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKAL--GLESRIELLF 111 (233)
T ss_dssp CCCCHHHHHHHHHHH-HH-HCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHT--TCTTTEEEEC
T ss_pred CCcCHHHHHHHHHHH-hc-cCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHc--CCCCcEEEEE
Confidence 344555555544433 32 3678999999999999999998754469999999999999999999874 2335799999
Q ss_pred ccCCcCcccc--cCCccEEEECCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 358 ADNSIEPLSW--LVGSDVLVVDPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 358 ~d~~~~~~~~--~~~~D~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
+|+.+.+... .+.||+|++|.+..... .+++.+..+-.++++++++
T Consensus 112 ~d~~~~~~~~~~~~~fD~I~~~~~~~~~~-~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 112 GDALQLGEKLELYPLFDVLFIDAAKGQYR-RFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp SCGGGSHHHHTTSCCEEEEEEEGGGSCHH-HHHHHHGGGEEEEEEEEEE
T ss_pred CCHHHHHHhcccCCCccEEEECCCHHHHH-HHHHHHHHHcCCCeEEEEE
Confidence 9998764433 35799999999865443 4555555543467777765
No 85
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.13 E-value=3.8e-10 Score=107.40 Aligned_cols=108 Identities=13% Similarity=0.082 Sum_probs=77.5
Q ss_pred CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCC-----CCCCcEEEEEccCCcCcccc--cC
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPK-----SVDGNISWHNADNSIEPLSW--LV 369 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~-----~~~~nv~~~~~d~~~~~~~~--~~ 369 (457)
.++.+|||+|||+|.+++.+|.......|+|||+++.+++.|++|++.+.. ++..|++++++|+.+.+... ..
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~ 127 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKG 127 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTT
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhcccc
Confidence 467899999999999999999865445899999999999999999876300 03468999999998755432 24
Q ss_pred CccEEEEC-C-C--------CCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 370 GSDVLVVD-P-P--------RKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 370 ~~D~vi~D-P-P--------R~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
.+|.|+++ | | |..+...+++.+..+-.+++++++.
T Consensus 128 ~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~ 172 (246)
T 2vdv_E 128 QLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTI 172 (246)
T ss_dssp CEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEE
T ss_pred ccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEE
Confidence 67766543 3 2 1223346666666544477777775
No 86
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.13 E-value=4.7e-11 Score=113.87 Aligned_cols=124 Identities=11% Similarity=-0.015 Sum_probs=90.0
Q ss_pred CCCCCCHHHHHHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCC-CCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEE
Q 044572 276 SFGQANTRAFDILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARK-CRSVKCVEINKESQLSFEKTVSRLPKSVDGNIS 354 (457)
Q Consensus 276 ~FfQ~n~~~~~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~-~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~ 354 (457)
.+++........|. .+... .++.+|||+|||+|..++.+|...+ ..+|++||+++++++.|++|++.+ +..++++
T Consensus 40 ~~~~i~~~~~~~l~-~l~~~-~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~--g~~~~i~ 115 (242)
T 3r3h_A 40 ANMQVAPEQAQFMQ-MLIRL-TRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREA--KQEHKIK 115 (242)
T ss_dssp GGTSCCHHHHHHHH-HHHHH-HTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHT--TCTTTEE
T ss_pred CCCccCHHHHHHHH-HHHhh-cCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--CCCCcEE
Confidence 45666666655544 34333 2578999999999999999998542 469999999999999999999884 3346899
Q ss_pred EEEccCCcCcccc-----cCCccEEEECCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 355 WHNADNSIEPLSW-----LVGSDVLVVDPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 355 ~~~~d~~~~~~~~-----~~~~D~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
++.+|+.+.+... .+.||+|++|.+..... ..++.+..+-.+++++.+.
T Consensus 116 ~~~gda~~~l~~~~~~~~~~~fD~V~~d~~~~~~~-~~l~~~~~~LkpGG~lv~d 169 (242)
T 3r3h_A 116 LRLGPALDTLHSLLNEGGEHQFDFIFIDADKTNYL-NYYELALKLVTPKGLIAID 169 (242)
T ss_dssp EEESCHHHHHHHHHHHHCSSCEEEEEEESCGGGHH-HHHHHHHHHEEEEEEEEEE
T ss_pred EEEcCHHHHHHHHhhccCCCCEeEEEEcCChHHhH-HHHHHHHHhcCCCeEEEEE
Confidence 9999997765443 36899999999854433 3444444433467776663
No 87
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.12 E-value=3.2e-10 Score=115.17 Aligned_cols=128 Identities=17% Similarity=0.194 Sum_probs=86.4
Q ss_pred CCCCCCCCHHHHHHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhC-----CCC
Q 044572 274 PSSFGQANTRAFDILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRL-----PKS 348 (457)
Q Consensus 274 ~~~FfQ~n~~~~~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~-----~~~ 348 (457)
...|-..+......+++.+. +.++++|||||||+|.+++.+|...++.+|+|||+++.+++.|++|++.. .++
T Consensus 151 ~~vYGEt~~~~i~~il~~l~--l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~G 228 (438)
T 3uwp_A 151 PEVYGETSFDLVAQMIDEIK--MTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYG 228 (438)
T ss_dssp GGGGGGTHHHHHHHHHHHHC--CCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CcccCCCCHHHHHHHHHhcC--CCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 34444555555555555431 34789999999999999999998777778999999999999999876320 011
Q ss_pred C-CCcEEEEEccCCcCcccc-cCCccEEEECCCCCCc--cHHHHHHHHhcCCCCcEEEEe
Q 044572 349 V-DGNISWHNADNSIEPLSW-LVGSDVLVVDPPRKGL--DSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 349 ~-~~nv~~~~~d~~~~~~~~-~~~~D~vi~DPPR~Gl--~~~v~~~l~~~~~~~~ivyvs 404 (457)
. ..+|+|+++|+.+..... ...+|+|+++++...- ...+.+..+.++ +++.+.++
T Consensus 229 l~~~rVefi~GD~~~lp~~d~~~~aDVVf~Nn~~F~pdl~~aL~Ei~RvLK-PGGrIVss 287 (438)
T 3uwp_A 229 KKHAEYTLERGDFLSEEWRERIANTSVIFVNNFAFGPEVDHQLKERFANMK-EGGRIVSS 287 (438)
T ss_dssp BCCCEEEEEECCTTSHHHHHHHHTCSEEEECCTTCCHHHHHHHHHHHTTSC-TTCEEEES
T ss_pred CCCCCeEEEECcccCCccccccCCccEEEEcccccCchHHHHHHHHHHcCC-CCcEEEEe
Confidence 1 268999999998753211 1479999999987531 112333333455 55555543
No 88
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.12 E-value=4.6e-10 Score=107.24 Aligned_cols=123 Identities=15% Similarity=0.049 Sum_probs=88.9
Q ss_pred CCCCCHHHHHHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCC-CCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEE
Q 044572 277 FGQANTRAFDILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARK-CRSVKCVEINKESQLSFEKTVSRLPKSVDGNISW 355 (457)
Q Consensus 277 FfQ~n~~~~~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~-~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~ 355 (457)
+.+....... ++..+.... ++.+|||+|||+|..++.+|.... ..+|++||+++++++.|++|++.+ +..+++++
T Consensus 60 ~~~~~~~~~~-ll~~l~~~~-~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~--g~~~~i~~ 135 (247)
T 1sui_A 60 IMTTSADEGQ-FLSMLLKLI-NAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKA--GVDHKIDF 135 (247)
T ss_dssp GGSCCHHHHH-HHHHHHHHT-TCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHT--TCGGGEEE
T ss_pred CCCcCHHHHH-HHHHHHHhh-CcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--CCCCCeEE
Confidence 5566665544 445555443 578999999999999999998632 359999999999999999999874 33468999
Q ss_pred EEccCCcCcccc------cCCccEEEECCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 356 HNADNSIEPLSW------LVGSDVLVVDPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 356 ~~~d~~~~~~~~------~~~~D~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
+.+|+.+.+... .+.||+|++|.+..... ..++.+..+-.+++++.+.
T Consensus 136 ~~gda~~~l~~l~~~~~~~~~fD~V~~d~~~~~~~-~~l~~~~~~LkpGG~lv~d 189 (247)
T 1sui_A 136 REGPALPVLDEMIKDEKNHGSYDFIFVDADKDNYL-NYHKRLIDLVKVGGVIGYD 189 (247)
T ss_dssp EESCHHHHHHHHHHSGGGTTCBSEEEECSCSTTHH-HHHHHHHHHBCTTCCEEEE
T ss_pred EECCHHHHHHHHHhccCCCCCEEEEEEcCchHHHH-HHHHHHHHhCCCCeEEEEe
Confidence 999997754433 36799999998865443 3454444433466666653
No 89
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=99.12 E-value=3.1e-11 Score=116.18 Aligned_cols=84 Identities=19% Similarity=0.138 Sum_probs=65.3
Q ss_pred CCC--CeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCC----CCC-C-CcEEEEEccCCcCccccc
Q 044572 297 PYG--ASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLP----KSV-D-GNISWHNADNSIEPLSWL 368 (457)
Q Consensus 297 ~~~--~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~----~~~-~-~nv~~~~~d~~~~~~~~~ 368 (457)
.++ .+|||+|||+|.+++.+|.+ ++ +|++||+++.+++.+++|++... .+. . .+++++++|+.+++..+.
T Consensus 85 ~~g~~~~VLDl~~G~G~dal~lA~~-g~-~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~ 162 (258)
T 2oyr_A 85 KGDYLPDVVDATAGLGRDAFVLASV-GC-RVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDIT 162 (258)
T ss_dssp BTTBCCCEEETTCTTCHHHHHHHHH-TC-CEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCS
T ss_pred cCCCCCEEEEcCCcCCHHHHHHHHc-CC-EEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCc
Confidence 356 89999999999999999986 33 79999999988777777754321 011 1 579999999988665444
Q ss_pred CCccEEEECCCCCC
Q 044572 369 VGSDVLVVDPPRKG 382 (457)
Q Consensus 369 ~~~D~vi~DPPR~G 382 (457)
..||+|++|||+..
T Consensus 163 ~~fDvV~lDP~y~~ 176 (258)
T 2oyr_A 163 PRPQVVYLDPMFPH 176 (258)
T ss_dssp SCCSEEEECCCCCC
T ss_pred ccCCEEEEcCCCCC
Confidence 57999999999754
No 90
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.11 E-value=3.7e-10 Score=109.76 Aligned_cols=108 Identities=12% Similarity=0.049 Sum_probs=81.8
Q ss_pred CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCC-CCCcEEEEEccCCcCcccccCCccEEE
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKS-VDGNISWHNADNSIEPLSWLVGSDVLV 375 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~-~~~nv~~~~~d~~~~~~~~~~~~D~vi 375 (457)
....+|||+|||+|.++..+++..+..+|++||+++++++.|++|+....++ ...+++++.+|+.+.+....+.||+|+
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii 153 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIM 153 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEE
Confidence 3578999999999999999997645679999999999999999997532111 236899999999876543346799999
Q ss_pred ECCCCCCc------cHHHHHHHHhcCCCCcEEEEe
Q 044572 376 VDPPRKGL------DSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 376 ~DPPR~Gl------~~~v~~~l~~~~~~~~ivyvs 404 (457)
+|+|.... ..++++.+.+.-.+++++.+.
T Consensus 154 ~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~ 188 (275)
T 1iy9_A 154 VDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQ 188 (275)
T ss_dssp ESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEE
T ss_pred ECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 99985311 245666666544477777776
No 91
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.11 E-value=2.7e-10 Score=111.94 Aligned_cols=108 Identities=12% Similarity=0.032 Sum_probs=78.5
Q ss_pred CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCC-CCCcEEEEEccCCcCcccccCCccEEE
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKS-VDGNISWHNADNSIEPLSWLVGSDVLV 375 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~-~~~nv~~~~~d~~~~~~~~~~~~D~vi 375 (457)
..+.+|||+|||+|.++..+++..+..+|++||+|+.+++.|++|+...... ...+++++.+|+.+.+....+.||+|+
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 168 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVII 168 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEE
Confidence 4568999999999999999997645679999999999999999997531001 136899999998775443346799999
Q ss_pred ECCCCC--C-----ccHHHHHHHHhcCCCCcEEEEe
Q 044572 376 VDPPRK--G-----LDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 376 ~DPPR~--G-----l~~~v~~~l~~~~~~~~ivyvs 404 (457)
+|+|.. + ...++++.+.+.-.+++++.+.
T Consensus 169 ~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 204 (296)
T 1inl_A 169 IDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAE 204 (296)
T ss_dssp EEC----------CCSHHHHHHHHHHEEEEEEEEEE
T ss_pred EcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 999743 2 2245666666544466666665
No 92
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.10 E-value=8.6e-10 Score=102.46 Aligned_cols=104 Identities=15% Similarity=0.093 Sum_probs=75.7
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCC----CcEEEEEccCCcCcccccCCccE
Q 044572 298 YGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVD----GNISWHNADNSIEPLSWLVGSDV 373 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~----~nv~~~~~d~~~~~~~~~~~~D~ 373 (457)
++.+|||+|||+|.++..++...+..+|+|||+|+.+++.|++++..++ .. .+++++++|+..... ..+.||+
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~--~~~~~~~~v~~~~~d~~~~~~-~~~~fD~ 105 (219)
T 3jwg_A 29 NAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDR--LPEMQRKRISLFQSSLVYRDK-RFSGYDA 105 (219)
T ss_dssp TCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGG--SCHHHHTTEEEEECCSSSCCG-GGTTCSE
T ss_pred CCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhc--cccccCcceEEEeCccccccc-ccCCCCE
Confidence 5789999999999999999976544699999999999999999987531 11 279999999865432 2368999
Q ss_pred EEECCCCCCcc----HHHHHHHHhcCCCCcEEEEe
Q 044572 374 LVVDPPRKGLD----SSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 374 vi~DPPR~Gl~----~~v~~~l~~~~~~~~ivyvs 404 (457)
|++.-.-.-+. ..+++.+.+...+++++++.
T Consensus 106 V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 140 (219)
T 3jwg_A 106 ATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVST 140 (219)
T ss_dssp EEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEE
T ss_pred EEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEc
Confidence 99754422222 24566666655567665554
No 93
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.10 E-value=6.2e-10 Score=105.38 Aligned_cols=104 Identities=14% Similarity=0.018 Sum_probs=79.7
Q ss_pred CCCCCeEEEEcccccHHHHHHHhhCC-CCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcc--cccCCcc
Q 044572 296 VPYGASVTDLYAGAGVIGLSLAAARK-CRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPL--SWLVGSD 372 (457)
Q Consensus 296 ~~~~~~vLDl~cG~G~~sl~lA~~~~-~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~--~~~~~~D 372 (457)
+++|++|||+|||+|.++.++|+..| ..+|+|||+++++++.++++++.. .|+..+.+|+..... .....+|
T Consensus 75 ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~-----~ni~~V~~d~~~p~~~~~~~~~vD 149 (233)
T 4df3_A 75 VKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR-----RNIFPILGDARFPEKYRHLVEGVD 149 (233)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC-----TTEEEEESCTTCGGGGTTTCCCEE
T ss_pred CCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh-----cCeeEEEEeccCccccccccceEE
Confidence 35899999999999999999998754 469999999999999999987652 578999999865321 1235789
Q ss_pred EEEECCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 373 VLVVDPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 373 ~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
+|+.|.+..+-...++..+....++++.+.++
T Consensus 150 vVf~d~~~~~~~~~~l~~~~r~LKpGG~lvI~ 181 (233)
T 4df3_A 150 GLYADVAQPEQAAIVVRNARFFLRDGGYMLMA 181 (233)
T ss_dssp EEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEeccCChhHHHHHHHHHHhccCCCEEEEE
Confidence 99999998775555665554433366666654
No 94
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.09 E-value=2.4e-10 Score=118.03 Aligned_cols=84 Identities=17% Similarity=0.159 Sum_probs=69.5
Q ss_pred CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCccccc-CCccEEE
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWL-VGSDVLV 375 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~-~~~D~vi 375 (457)
.++.+|||+|||+|..++.+|...+..+|+|+|+++.+++.+++|++.++ . +++++++|+.+....+. ..||+|+
T Consensus 245 ~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g---~-~~~~~~~D~~~~~~~~~~~~fD~Vl 320 (429)
T 1sqg_A 245 QNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLG---M-KATVKQGDGRYPSQWCGEQQFDRIL 320 (429)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTT---C-CCEEEECCTTCTHHHHTTCCEEEEE
T ss_pred CCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcC---C-CeEEEeCchhhchhhcccCCCCEEE
Confidence 47899999999999999999987544699999999999999999998843 2 47899999987542222 4799999
Q ss_pred ECCCCCCcc
Q 044572 376 VDPPRKGLD 384 (457)
Q Consensus 376 ~DPPR~Gl~ 384 (457)
+|||..|..
T Consensus 321 ~D~Pcsg~g 329 (429)
T 1sqg_A 321 LDAPCSATG 329 (429)
T ss_dssp EECCCCCGG
T ss_pred EeCCCCccc
Confidence 999987753
No 95
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.09 E-value=4.6e-10 Score=110.17 Aligned_cols=129 Identities=12% Similarity=-0.020 Sum_probs=86.3
Q ss_pred CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCC--CCCCcEEEEEccCCcCcccccCCccEE
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPK--SVDGNISWHNADNSIEPLSWLVGSDVL 374 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~--~~~~nv~~~~~d~~~~~~~~~~~~D~v 374 (457)
+...+|||+|||+|.++..+++..+..+|++||+|+++++.|++|+...+. ....+++++.+|+.+++....+.||+|
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvI 161 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEE
Confidence 457899999999999999999865567999999999999999999765210 123589999999988765444679999
Q ss_pred EECCCCC-Cc-----cHHHHHHHHhcCCCCcEEEEeccCCCCCchhchhhHHHHHHHh
Q 044572 375 VVDPPRK-GL-----DSSLVHALQSIGSAERKAKSLSESSSSMVKEEKRPWILRAKEA 426 (457)
Q Consensus 375 i~DPPR~-Gl-----~~~v~~~l~~~~~~~~ivyvs~~~~~c~~~~~~~~~~~~~~~~ 426 (457)
|+|++-. +. ..++++.+.+.-.+++++.+.+++..- .....+.+...++..
T Consensus 162 i~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~s~~~-~~~~~~~~~~~l~~~ 218 (294)
T 3adn_A 162 ISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFL-QQEEAIDSHRKLSHY 218 (294)
T ss_dssp EECC----------CCHHHHHHHHHTEEEEEEEEEEEEECSS-CCHHHHHHHHHHHHH
T ss_pred EECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEecCCccc-chHHHHHHHHHHHHH
Confidence 9998742 21 245666666654567777765322211 112344555555544
No 96
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.09 E-value=5.8e-10 Score=107.97 Aligned_cols=117 Identities=15% Similarity=0.091 Sum_probs=83.5
Q ss_pred CCCCeEEEEcccccHHHHHHHhhCC-CCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEE
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAARK-CRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLV 375 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~~-~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi 375 (457)
.++.+|||+|||+|.+++.+++..+ ..+|+++|+++.+++.|++|++.+ +..++++++.+|+.+.+. ...||+|+
T Consensus 111 ~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~--~~~~D~V~ 186 (277)
T 1o54_A 111 KEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKW--GLIERVTIKVRDISEGFD--EKDVDALF 186 (277)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHT--TCGGGEEEECCCGGGCCS--CCSEEEEE
T ss_pred CCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHc--CCCCCEEEEECCHHHccc--CCccCEEE
Confidence 3688999999999999999998732 569999999999999999999874 223689999999977532 24699999
Q ss_pred ECCCCCCccHHHHHHHHhcCCCCcEEEEeccCCCCCchhchhhHHHHHHH
Q 044572 376 VDPPRKGLDSSLVHALQSIGSAERKAKSLSESSSSMVKEEKRPWILRAKE 425 (457)
Q Consensus 376 ~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs~~~~~c~~~~~~~~~~~~~~~ 425 (457)
+|||.. ..+++.+.+...+++.+++. +........+...+++
T Consensus 187 ~~~~~~---~~~l~~~~~~L~pgG~l~~~-----~~~~~~~~~~~~~l~~ 228 (277)
T 1o54_A 187 LDVPDP---WNYIDKCWEALKGGGRFATV-----CPTTNQVQETLKKLQE 228 (277)
T ss_dssp ECCSCG---GGTHHHHHHHEEEEEEEEEE-----ESSHHHHHHHHHHHHH
T ss_pred ECCcCH---HHHHHHHHHHcCCCCEEEEE-----eCCHHHHHHHHHHHHH
Confidence 999853 13444444432356666654 3323334445555444
No 97
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.09 E-value=7.6e-10 Score=103.00 Aligned_cols=115 Identities=15% Similarity=0.076 Sum_probs=84.3
Q ss_pred HHHHHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCc
Q 044572 283 RAFDILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSI 362 (457)
Q Consensus 283 ~~~~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~ 362 (457)
...+.+.+.+.+.+.++.+|||+|||+|.++..++.... +|+|+|+++.+++.|++|++.+ . .+++++++|+.+
T Consensus 23 ~~~~~~~~~l~~~~~~~~~vLDlG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~---~-~~~~~~~~d~~~ 96 (227)
T 1ve3_A 23 SRIETLEPLLMKYMKKRGKVLDLACGVGGFSFLLEDYGF--EVVGVDISEDMIRKAREYAKSR---E-SNVEFIVGDARK 96 (227)
T ss_dssp HHHHHHHHHHHHSCCSCCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT---T-CCCEEEECCTTS
T ss_pred HHHHHHHHHHHHhcCCCCeEEEEeccCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhc---C-CCceEEECchhc
Confidence 445566677777666788999999999999999998643 9999999999999999998873 2 578999999877
Q ss_pred CcccccCCccEEEECCC--CCCcc--HHHHHHHHhcCCCCcEEEEe
Q 044572 363 EPLSWLVGSDVLVVDPP--RKGLD--SSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 363 ~~~~~~~~~D~vi~DPP--R~Gl~--~~v~~~l~~~~~~~~ivyvs 404 (457)
... ..+.||+|+++++ ..... ..+++.+.+.-.+++.+++.
T Consensus 97 ~~~-~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~ 141 (227)
T 1ve3_A 97 LSF-EDKTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMY 141 (227)
T ss_dssp CCS-CTTCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCC-CCCcEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 431 1257999999988 43322 23455554433355555553
No 98
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.08 E-value=6.9e-10 Score=102.44 Aligned_cols=98 Identities=17% Similarity=0.098 Sum_probs=77.0
Q ss_pred CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEE
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVV 376 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~ 376 (457)
.++.+|||+|||+|.+++.+++. ..+|+++|+++.+++.|++|++.+ +..+++++.+|+.+.... ...||+|++
T Consensus 76 ~~~~~vLdiG~G~G~~~~~la~~--~~~v~~vD~~~~~~~~a~~~~~~~---~~~~v~~~~~d~~~~~~~-~~~~D~i~~ 149 (210)
T 3lbf_A 76 TPQSRVLEIGTGSGYQTAILAHL--VQHVCSVERIKGLQWQARRRLKNL---DLHNVSTRHGDGWQGWQA-RAPFDAIIV 149 (210)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHHHHHHHT---TCCSEEEEESCGGGCCGG-GCCEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHc---CCCceEEEECCcccCCcc-CCCccEEEE
Confidence 46899999999999999999987 459999999999999999999874 345899999999875433 368999999
Q ss_pred CCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 377 DPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 377 DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
+.....+...+ ...++ +++.++++
T Consensus 150 ~~~~~~~~~~~---~~~L~-pgG~lv~~ 173 (210)
T 3lbf_A 150 TAAPPEIPTAL---MTQLD-EGGILVLP 173 (210)
T ss_dssp SSBCSSCCTHH---HHTEE-EEEEEEEE
T ss_pred ccchhhhhHHH---HHhcc-cCcEEEEE
Confidence 87655554432 33444 66666665
No 99
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.07 E-value=3.4e-10 Score=106.86 Aligned_cols=99 Identities=16% Similarity=0.089 Sum_probs=76.8
Q ss_pred CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEE
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVV 376 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~ 376 (457)
.++.+|||+|||+|.+++.+++..+ .+|+++|+++.+++.|++|++.+ +..+++++.+|+...+.. ...||+|++
T Consensus 90 ~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~---~~~~v~~~~~d~~~~~~~-~~~fD~Ii~ 164 (235)
T 1jg1_A 90 KPGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERA---GVKNVHVILGDGSKGFPP-KAPYDVIIV 164 (235)
T ss_dssp CTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHT---TCCSEEEEESCGGGCCGG-GCCEEEEEE
T ss_pred CCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHc---CCCCcEEEECCcccCCCC-CCCccEEEE
Confidence 4688999999999999999998754 69999999999999999999873 345799999998433221 235999999
Q ss_pred CCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 377 DPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 377 DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
+.+...+..++ ...++ +++.++++
T Consensus 165 ~~~~~~~~~~~---~~~L~-pgG~lvi~ 188 (235)
T 1jg1_A 165 TAGAPKIPEPL---IEQLK-IGGKLIIP 188 (235)
T ss_dssp CSBBSSCCHHH---HHTEE-EEEEEEEE
T ss_pred CCcHHHHHHHH---HHhcC-CCcEEEEE
Confidence 98876665533 33454 67777776
No 100
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.07 E-value=5.6e-10 Score=113.01 Aligned_cols=98 Identities=18% Similarity=0.108 Sum_probs=76.2
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEEC
Q 044572 298 YGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVVD 377 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~D 377 (457)
+|++|||+|||+|.+++.+|+ .|+++|+|||.|+ +++.|+++++.| +..++|+++++|+++.. +.+++|+||.+
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~-aGA~~V~ave~s~-~~~~a~~~~~~n--~~~~~i~~i~~~~~~~~--lpe~~DvivsE 156 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQ-AGARRVYAVEASA-IWQQAREVVRFN--GLEDRVHVLPGPVETVE--LPEQVDAIVSE 156 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHH-TTCSEEEEEECST-THHHHHHHHHHT--TCTTTEEEEESCTTTCC--CSSCEEEEECC
T ss_pred CCCEEEEeCCCccHHHHHHHH-hCCCEEEEEeChH-HHHHHHHHHHHc--CCCceEEEEeeeeeeec--CCccccEEEee
Confidence 689999999999999999887 6789999999996 789999999984 45578999999998753 23689999998
Q ss_pred CCCC-----CccHHHHHHHHhcCCCCcEE
Q 044572 378 PPRK-----GLDSSLVHALQSIGSAERKA 401 (457)
Q Consensus 378 PPR~-----Gl~~~v~~~l~~~~~~~~iv 401 (457)
+--. ++-+.++.+..++..+++++
T Consensus 157 ~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~ 185 (376)
T 4hc4_A 157 WMGYGLLHESMLSSVLHARTKWLKEGGLL 185 (376)
T ss_dssp CCBTTBTTTCSHHHHHHHHHHHEEEEEEE
T ss_pred cccccccccchhhhHHHHHHhhCCCCceE
Confidence 7633 34445666665543344443
No 101
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.07 E-value=3e-10 Score=105.23 Aligned_cols=114 Identities=11% Similarity=0.009 Sum_probs=83.5
Q ss_pred HHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCC-CCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCc
Q 044572 286 DILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARK-CRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEP 364 (457)
Q Consensus 286 ~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~-~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~ 364 (457)
..++..+.... ++.+|||+|||+|..++.++...+ ..+|++||+++.+++.|++|++.. +..++++++.+|+.+.+
T Consensus 45 ~~~l~~l~~~~-~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~ 121 (210)
T 3c3p_A 45 GRLLYLLARIK-QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDN--GLIDRVELQVGDPLGIA 121 (210)
T ss_dssp HHHHHHHHHHH-CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHH--SGGGGEEEEESCHHHHH
T ss_pred HHHHHHHHHhh-CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHC--CCCceEEEEEecHHHHh
Confidence 34445444432 578999999999999999997533 469999999999999999998863 23357999999987654
Q ss_pred ccccCCccEEEECCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 365 LSWLVGSDVLVVDPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 365 ~~~~~~~D~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
....+ ||+|++|.+..... .+++.+.++-.+++++++.
T Consensus 122 ~~~~~-fD~v~~~~~~~~~~-~~l~~~~~~LkpgG~lv~~ 159 (210)
T 3c3p_A 122 AGQRD-IDILFMDCDVFNGA-DVLERMNRCLAKNALLIAV 159 (210)
T ss_dssp TTCCS-EEEEEEETTTSCHH-HHHHHHGGGEEEEEEEEEE
T ss_pred ccCCC-CCEEEEcCChhhhH-HHHHHHHHhcCCCeEEEEE
Confidence 33335 99999998765543 4555555544467777664
No 102
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.07 E-value=2.4e-09 Score=99.39 Aligned_cols=104 Identities=15% Similarity=0.115 Sum_probs=76.4
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCC----CcEEEEEccCCcCcccccCCccE
Q 044572 298 YGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVD----GNISWHNADNSIEPLSWLVGSDV 373 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~----~nv~~~~~d~~~~~~~~~~~~D~ 373 (457)
++.+|||+|||+|.++..+++..+..+|+|||+|+.+++.|++|++.++ .. .+++++++|+..... ..+.||+
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~--~~~~~~~~v~~~~~d~~~~~~-~~~~fD~ 105 (217)
T 3jwh_A 29 NARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLR--LPRNQWERLQLIQGALTYQDK-RFHGYDA 105 (217)
T ss_dssp TCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCC--CCHHHHTTEEEEECCTTSCCG-GGCSCSE
T ss_pred CCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhc--CCcccCcceEEEeCCcccccc-cCCCcCE
Confidence 5789999999999999999986545699999999999999999987632 22 279999999864322 2367999
Q ss_pred EEECCCCCCcc----HHHHHHHHhcCCCCcEEEEe
Q 044572 374 LVVDPPRKGLD----SSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 374 vi~DPPR~Gl~----~~v~~~l~~~~~~~~ivyvs 404 (457)
|++.-.-.-+. ..+++.+.+...++++++++
T Consensus 106 v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~ 140 (217)
T 3jwh_A 106 ATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTT 140 (217)
T ss_dssp EEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEE
T ss_pred EeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEc
Confidence 99755422122 24566666655567766654
No 103
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.07 E-value=1e-09 Score=107.09 Aligned_cols=105 Identities=16% Similarity=0.134 Sum_probs=79.2
Q ss_pred CCHHHHHHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEcc
Q 044572 280 ANTRAFDILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNAD 359 (457)
Q Consensus 280 ~n~~~~~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d 359 (457)
.+....+.+++.+. +.++.+|||+|||+|.++..++... .+|+|||+|+.+++.|+++++.+ +..++++++++|
T Consensus 12 ~d~~i~~~i~~~~~--~~~~~~VLDiG~G~G~lt~~L~~~~--~~v~~vD~~~~~~~~a~~~~~~~--~~~~~v~~~~~D 85 (285)
T 1zq9_A 12 KNPLIINSIIDKAA--LRPTDVVLEVGPGTGNMTVKLLEKA--KKVVACELDPRLVAELHKRVQGT--PVASKLQVLVGD 85 (285)
T ss_dssp CCHHHHHHHHHHTC--CCTTCEEEEECCTTSTTHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTS--TTGGGEEEEESC
T ss_pred CCHHHHHHHHHhcC--CCCCCEEEEEcCcccHHHHHHHhhC--CEEEEEECCHHHHHHHHHHHHhc--CCCCceEEEEcc
Confidence 34555554444321 2367899999999999999999874 49999999999999999998753 223589999999
Q ss_pred CCcCcccccCCccEEEECCCCCCccHHHHHHHHh
Q 044572 360 NSIEPLSWLVGSDVLVVDPPRKGLDSSLVHALQS 393 (457)
Q Consensus 360 ~~~~~~~~~~~~D~vi~DPPR~Gl~~~v~~~l~~ 393 (457)
+.+.. ...||+|+.|+|+...++.+.+.+..
T Consensus 86 ~~~~~---~~~fD~vv~nlpy~~~~~~~~~~l~~ 116 (285)
T 1zq9_A 86 VLKTD---LPFFDTCVANLPYQISSPFVFKLLLH 116 (285)
T ss_dssp TTTSC---CCCCSEEEEECCGGGHHHHHHHHHHC
T ss_pred eeccc---chhhcEEEEecCcccchHHHHHHHhc
Confidence 98653 23799999999998776655555543
No 104
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.06 E-value=5.2e-10 Score=109.00 Aligned_cols=105 Identities=13% Similarity=0.071 Sum_probs=80.1
Q ss_pred CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCC--------CCCcEEEEEccCCcCccccc
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKS--------VDGNISWHNADNSIEPLSWL 368 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~--------~~~nv~~~~~d~~~~~~~~~ 368 (457)
..+.+|||+|||+|.++..+++. +..+|++||+++.+++.|++|+ ....+ ...+++++.+|+.+.+.. .
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~ 150 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-N 150 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-C
T ss_pred CCCCeEEEEcCCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcc-c
Confidence 46789999999999999999986 6779999999999999999998 32101 236899999998765443 4
Q ss_pred CCccEEEECCCCC-----Cc-cHHHHHHHHhcCCCCcEEEEe
Q 044572 369 VGSDVLVVDPPRK-----GL-DSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 369 ~~~D~vi~DPPR~-----Gl-~~~v~~~l~~~~~~~~ivyvs 404 (457)
+.||+|++|+|.. .+ ..++++.+.+.-.+++++.+.
T Consensus 151 ~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~ 192 (281)
T 1mjf_A 151 RGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQ 192 (281)
T ss_dssp CCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEE
T ss_pred CCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 6799999999842 22 355666666554467777665
No 105
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.06 E-value=2.7e-10 Score=109.78 Aligned_cols=130 Identities=9% Similarity=-0.051 Sum_probs=81.2
Q ss_pred CCCCCCCHHHH-HHHHHHHHhhC--CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCC
Q 044572 275 SSFGQANTRAF-DILLRKLQKYV--PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDG 351 (457)
Q Consensus 275 ~~FfQ~n~~~~-~~l~~~i~~~~--~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~ 351 (457)
..|+|.+.... ...++.+.+.+ .++.+|||+|||+|.+++.+|+.+ .+|+|||+|+.|++.|++|++.+ .-
T Consensus 19 ~~f~~~~~~~~~~~~~~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~g--~~V~gvD~S~~ml~~Ar~~~~~~----~v 92 (261)
T 3iv6_A 19 NQFWTIGRVAARPSDRENDIFLENIVPGSTVAVIGASTRFLIEKALERG--ASVTVFDFSQRMCDDLAEALADR----CV 92 (261)
T ss_dssp THHHHTSCGGGSCCHHHHHHHTTTCCTTCEEEEECTTCHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHTSSS----CC
T ss_pred HHHHHHhhccccHHHHHHHHHhcCCCCcCEEEEEeCcchHHHHHHHhcC--CEEEEEECCHHHHHHHHHHHHhc----cc
Confidence 34555443221 22334444443 368899999999999999999863 49999999999999999997651 11
Q ss_pred cEEEEEccCCcCcccccCCccEEEECCCCCCcc----HHHHHHHHhcCCCCcEEEEeccCCCCCchhchh
Q 044572 352 NISWHNADNSIEPLSWLVGSDVLVVDPPRKGLD----SSLVHALQSIGSAERKAKSLSESSSSMVKEEKR 417 (457)
Q Consensus 352 nv~~~~~d~~~~~~~~~~~~D~vi~DPPR~Gl~----~~v~~~l~~~~~~~~ivyvs~~~~~c~~~~~~~ 417 (457)
+..+...+.. ......+.||+|+++..-.-+. ..++..+..+. +++.+++| |......+
T Consensus 93 ~~~~~~~~~~-~~~~~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS-----~~~g~~~~ 155 (261)
T 3iv6_A 93 TIDLLDITAE-IPKELAGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRAS-----VKLGFYDI 155 (261)
T ss_dssp EEEECCTTSC-CCGGGTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEE-----EEBSCCHH
T ss_pred eeeeeecccc-cccccCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEE-----eccCcccc
Confidence 2233222220 0112235799999987522111 23555565665 88888898 66544433
No 106
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.06 E-value=5.8e-10 Score=106.40 Aligned_cols=98 Identities=13% Similarity=0.092 Sum_probs=72.5
Q ss_pred HHHHHHHhhCC--CCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCc
Q 044572 287 ILLRKLQKYVP--YGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEP 364 (457)
Q Consensus 287 ~l~~~i~~~~~--~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~ 364 (457)
.+++.+.+.+. ++.+|||+|||+|.++..++... .+|+|||+|+.+++.|++|++. ..+++++++|+.+..
T Consensus 17 ~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~-----~~~v~~~~~D~~~~~ 89 (244)
T 1qam_A 17 HNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRC--NFVTAIEIDHKLCKTTENKLVD-----HDNFQVLNKDILQFK 89 (244)
T ss_dssp HHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHS--SEEEEECSCHHHHHHHHHHTTT-----CCSEEEECCCGGGCC
T ss_pred HHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHcC--CeEEEEECCHHHHHHHHHhhcc-----CCCeEEEEChHHhCC
Confidence 34455555543 67899999999999999999874 5999999999999999998754 257999999998753
Q ss_pred ccccCCccEEEECCCCCCccHHHHHHHHh
Q 044572 365 LSWLVGSDVLVVDPPRKGLDSSLVHALQS 393 (457)
Q Consensus 365 ~~~~~~~D~vi~DPPR~Gl~~~v~~~l~~ 393 (457)
......| .||.|||+.-..+ ++..+..
T Consensus 90 ~~~~~~~-~vv~nlPy~~~~~-~l~~~l~ 116 (244)
T 1qam_A 90 FPKNQSY-KIFGNIPYNISTD-IIRKIVF 116 (244)
T ss_dssp CCSSCCC-EEEEECCGGGHHH-HHHHHHH
T ss_pred cccCCCe-EEEEeCCcccCHH-HHHHHHh
Confidence 2211234 7999999864443 4444443
No 107
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.06 E-value=1e-09 Score=104.36 Aligned_cols=102 Identities=18% Similarity=0.097 Sum_probs=76.4
Q ss_pred CCCCeEEEEcccccHHHHHHHhh-CCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEE
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAA-RKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLV 375 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~-~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi 375 (457)
.++.+|||+|||+|.+++.++.. ....+|+++|+++.+++.|++|++.+. +.++++++.+|+.+.... ...||+|+
T Consensus 95 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~--g~~~v~~~~~d~~~~~~~-~~~~D~v~ 171 (258)
T 2pwy_A 95 APGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFW--QVENVRFHLGKLEEAELE-EAAYDGVA 171 (258)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHC--CCCCEEEEESCGGGCCCC-TTCEEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhc--CCCCEEEEECchhhcCCC-CCCcCEEE
Confidence 47889999999999999999986 224699999999999999999988730 246899999999775111 25799999
Q ss_pred ECCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 376 VDPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 376 ~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
+|+|... .+++.+.+...+++.+++.
T Consensus 172 ~~~~~~~---~~l~~~~~~L~~gG~l~~~ 197 (258)
T 2pwy_A 172 LDLMEPW---KVLEKAALALKPDRFLVAY 197 (258)
T ss_dssp EESSCGG---GGHHHHHHHEEEEEEEEEE
T ss_pred ECCcCHH---HHHHHHHHhCCCCCEEEEE
Confidence 9998532 3445444433355555554
No 108
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.06 E-value=1.9e-09 Score=101.92 Aligned_cols=100 Identities=14% Similarity=0.079 Sum_probs=76.4
Q ss_pred CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEE
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVV 376 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~ 376 (457)
.++.+|||+|||+|.+++.+++. ..+|+++|+++++++.|++|++.+ +...+++++.+|+.+.... ...||+|++
T Consensus 90 ~~~~~vldiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~--~~~~~~~~~~~d~~~~~~~-~~~~D~v~~ 164 (248)
T 2yvl_A 90 NKEKRVLEFGTGSGALLAVLSEV--AGEVWTFEAVEEFYKTAQKNLKKF--NLGKNVKFFNVDFKDAEVP-EGIFHAAFV 164 (248)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHHHHT--TCCTTEEEECSCTTTSCCC-TTCBSEEEE
T ss_pred CCCCEEEEeCCCccHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHc--CCCCcEEEEEcChhhcccC-CCcccEEEE
Confidence 36889999999999999999987 469999999999999999999874 2336899999999875411 247999999
Q ss_pred CCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 377 DPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 377 DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
|+|.. ..+++.+.++-.+++.+++.
T Consensus 165 ~~~~~---~~~l~~~~~~L~~gG~l~~~ 189 (248)
T 2yvl_A 165 DVREP---WHYLEKVHKSLMEGAPVGFL 189 (248)
T ss_dssp CSSCG---GGGHHHHHHHBCTTCEEEEE
T ss_pred CCcCH---HHHHHHHHHHcCCCCEEEEE
Confidence 99832 13445444433356666665
No 109
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.06 E-value=6.9e-10 Score=107.56 Aligned_cols=102 Identities=17% Similarity=0.173 Sum_probs=77.8
Q ss_pred CHHHHHHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccC
Q 044572 281 NTRAFDILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADN 360 (457)
Q Consensus 281 n~~~~~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~ 360 (457)
+....+.+++.+. +.++ +|||+|||+|.++..++... .+|+|||+|+++++.+++|+.. .|++++++|+
T Consensus 32 d~~i~~~Iv~~~~--~~~~-~VLEIG~G~G~lt~~L~~~~--~~V~avEid~~~~~~l~~~~~~------~~v~vi~~D~ 100 (271)
T 3fut_A 32 SEAHLRRIVEAAR--PFTG-PVFEVGPGLGALTRALLEAG--AEVTAIEKDLRLRPVLEETLSG------LPVRLVFQDA 100 (271)
T ss_dssp CHHHHHHHHHHHC--CCCS-CEEEECCTTSHHHHHHHHTT--CCEEEEESCGGGHHHHHHHTTT------SSEEEEESCG
T ss_pred CHHHHHHHHHhcC--CCCC-eEEEEeCchHHHHHHHHHcC--CEEEEEECCHHHHHHHHHhcCC------CCEEEEECCh
Confidence 4555555555432 2357 99999999999999999863 5899999999999999998652 4799999999
Q ss_pred CcCcccccCCccEEEECCCCCCccHHHHHHHHh
Q 044572 361 SIEPLSWLVGSDVLVVDPPRKGLDSSLVHALQS 393 (457)
Q Consensus 361 ~~~~~~~~~~~D~vi~DPPR~Gl~~~v~~~l~~ 393 (457)
.+........+|.||.|+|+.-..+-+.+.+..
T Consensus 101 l~~~~~~~~~~~~iv~NlPy~iss~il~~ll~~ 133 (271)
T 3fut_A 101 LLYPWEEVPQGSLLVANLPYHIATPLVTRLLKT 133 (271)
T ss_dssp GGSCGGGSCTTEEEEEEECSSCCHHHHHHHHHH
T ss_pred hhCChhhccCccEEEecCcccccHHHHHHHhcC
Confidence 876433223689999999997766655555544
No 110
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.06 E-value=4.6e-10 Score=107.88 Aligned_cols=103 Identities=15% Similarity=0.138 Sum_probs=75.8
Q ss_pred CCHHHHHHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEcc
Q 044572 280 ANTRAFDILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNAD 359 (457)
Q Consensus 280 ~n~~~~~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d 359 (457)
.+....+.+++.+. +.++.+|||+|||+|.++..++... .+|+|||+|+++++.++++++. ..+++++++|
T Consensus 13 ~d~~i~~~iv~~~~--~~~~~~VLEIG~G~G~lt~~La~~~--~~V~avEid~~~~~~~~~~~~~-----~~~v~~i~~D 83 (255)
T 3tqs_A 13 HDSFVLQKIVSAIH--PQKTDTLVEIGPGRGALTDYLLTEC--DNLALVEIDRDLVAFLQKKYNQ-----QKNITIYQND 83 (255)
T ss_dssp CCHHHHHHHHHHHC--CCTTCEEEEECCTTTTTHHHHTTTS--SEEEEEECCHHHHHHHHHHHTT-----CTTEEEEESC
T ss_pred cCHHHHHHHHHhcC--CCCcCEEEEEcccccHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHhh-----CCCcEEEEcc
Confidence 34555555555432 2368899999999999999999763 6999999999999999999864 2589999999
Q ss_pred CCcCccc-c--cCCccEEEECCCCCCccHHHHHHHH
Q 044572 360 NSIEPLS-W--LVGSDVLVVDPPRKGLDSSLVHALQ 392 (457)
Q Consensus 360 ~~~~~~~-~--~~~~D~vi~DPPR~Gl~~~v~~~l~ 392 (457)
+.+.... . ...|| ||.|||+.--.+-+.+.+.
T Consensus 84 ~~~~~~~~~~~~~~~~-vv~NlPY~is~~il~~ll~ 118 (255)
T 3tqs_A 84 ALQFDFSSVKTDKPLR-VVGNLPYNISTPLLFHLFS 118 (255)
T ss_dssp TTTCCGGGSCCSSCEE-EEEECCHHHHHHHHHHHHH
T ss_pred hHhCCHHHhccCCCeE-EEecCCcccCHHHHHHHHh
Confidence 9886432 1 13567 9999998544443444443
No 111
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=99.05 E-value=2.5e-10 Score=112.35 Aligned_cols=90 Identities=10% Similarity=0.113 Sum_probs=70.3
Q ss_pred HHHHHHhhC--CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcc
Q 044572 288 LLRKLQKYV--PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPL 365 (457)
Q Consensus 288 l~~~i~~~~--~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~ 365 (457)
|++.+.+++ .++.+|||+|||+|.+++.++...+..+|+|||+|++|++.|++|++.+ + .+++++++|+.+...
T Consensus 14 Ll~e~l~~L~~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~---g-~~v~~v~~d~~~l~~ 89 (301)
T 1m6y_A 14 MVREVIEFLKPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEF---S-DRVSLFKVSYREADF 89 (301)
T ss_dssp THHHHHHHHCCCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGG---T-TTEEEEECCGGGHHH
T ss_pred HHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhc---C-CcEEEEECCHHHHHH
Confidence 334444443 3688999999999999999998753469999999999999999999873 2 589999999866421
Q ss_pred ccc----CCccEEEECCCCC
Q 044572 366 SWL----VGSDVLVVDPPRK 381 (457)
Q Consensus 366 ~~~----~~~D~vi~DPPR~ 381 (457)
.+. ..||.|++|||.+
T Consensus 90 ~l~~~g~~~~D~Vl~D~gvS 109 (301)
T 1m6y_A 90 LLKTLGIEKVDGILMDLGVS 109 (301)
T ss_dssp HHHHTTCSCEEEEEEECSCC
T ss_pred HHHhcCCCCCCEEEEcCccc
Confidence 111 4799999999864
No 112
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.05 E-value=4.4e-10 Score=107.61 Aligned_cols=120 Identities=18% Similarity=0.067 Sum_probs=84.1
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCccc--ccCCccEEE
Q 044572 298 YGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLS--WLVGSDVLV 375 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~--~~~~~D~vi 375 (457)
++.+|||+|||+|.+++.+|...+..+|++||+++.+++.|++|++.+ +..|++++++|+++.... ..+.||+|+
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~l~~v~~~~~d~~~~~~~~~~~~~fD~I~ 156 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVL---GLKGARALWGRAEVLAREAGHREAYARAV 156 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHH---TCSSEEEEECCHHHHTTSTTTTTCEEEEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHh---CCCceEEEECcHHHhhcccccCCCceEEE
Confidence 578999999999999999998755679999999999999999999874 335799999999775431 235799999
Q ss_pred ECCCCCCccHHHHHHHHhc-CCCCcEEEEeccCCCC-CchhchhhHHHHHHHhc
Q 044572 376 VDPPRKGLDSSLVHALQSI-GSAERKAKSLSESSSS-MVKEEKRPWILRAKEAS 427 (457)
Q Consensus 376 ~DPPR~Gl~~~v~~~l~~~-~~~~~ivyvs~~~~~c-~~~~~~~~~~~~~~~~~ 427 (457)
.+-- ..+ ..+++.+..+ ++.+.++++. + ........+...+...+
T Consensus 157 s~a~-~~~-~~ll~~~~~~LkpgG~l~~~~-----g~~~~~e~~~~~~~l~~~G 203 (249)
T 3g89_A 157 ARAV-APL-CVLSELLLPFLEVGGAAVAMK-----GPRVEEELAPLPPALERLG 203 (249)
T ss_dssp EESS-CCH-HHHHHHHGGGEEEEEEEEEEE-----CSCCHHHHTTHHHHHHHHT
T ss_pred ECCc-CCH-HHHHHHHHHHcCCCeEEEEEe-----CCCcHHHHHHHHHHHHHcC
Confidence 8421 112 3455555443 4344455554 2 23445555665555544
No 113
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.04 E-value=1.1e-09 Score=111.23 Aligned_cols=115 Identities=17% Similarity=0.092 Sum_probs=84.7
Q ss_pred HHHHHHHHHHhhC--CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCC
Q 044572 284 AFDILLRKLQKYV--PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNS 361 (457)
Q Consensus 284 ~~~~l~~~i~~~~--~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~ 361 (457)
.++.+.+.+.... .++.+|||+|||+|.+++.+|+. ++++|+|||+| .+++.|+++++.+ +..++++++++|+.
T Consensus 47 r~~~~~~~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~-g~~~V~gvD~s-~~~~~a~~~~~~~--~~~~~v~~~~~d~~ 122 (376)
T 3r0q_C 47 RMDAYFNAVFQNKHHFEGKTVLDVGTGSGILAIWSAQA-GARKVYAVEAT-KMADHARALVKAN--NLDHIVEVIEGSVE 122 (376)
T ss_dssp HHHHHHHHHHTTTTTTTTCEEEEESCTTTHHHHHHHHT-TCSEEEEEESS-TTHHHHHHHHHHT--TCTTTEEEEESCGG
T ss_pred HHHHHHHHHHhccccCCCCEEEEeccCcCHHHHHHHhc-CCCEEEEEccH-HHHHHHHHHHHHc--CCCCeEEEEECchh
Confidence 3444455554433 36889999999999999999985 66799999999 9999999999884 34467999999998
Q ss_pred cCcccccCCccEEEECCC-CC----CccHHHHHHHHhcCCCCcEEEEe
Q 044572 362 IEPLSWLVGSDVLVVDPP-RK----GLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 362 ~~~~~~~~~~D~vi~DPP-R~----Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
+.... +.||+|+.++. .. .....+++.+.++..++++++.+
T Consensus 123 ~~~~~--~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 123 DISLP--EKVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp GCCCS--SCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESS
T ss_pred hcCcC--CcceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEe
Confidence 76432 68999999984 22 22334666664443467776654
No 114
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.04 E-value=5.7e-10 Score=109.41 Aligned_cols=103 Identities=16% Similarity=0.135 Sum_probs=76.9
Q ss_pred CCHHHHHHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEcc
Q 044572 280 ANTRAFDILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNAD 359 (457)
Q Consensus 280 ~n~~~~~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d 359 (457)
.+....+.+++.+. +.++++|||+|||+|.++..++.. +.+|+|||+|+++++.++++++. ..|++++++|
T Consensus 34 ~d~~i~~~Iv~~l~--~~~~~~VLEIG~G~G~lT~~La~~--~~~V~aVEid~~li~~a~~~~~~-----~~~v~vi~gD 104 (295)
T 3gru_A 34 IDKNFVNKAVESAN--LTKDDVVLEIGLGKGILTEELAKN--AKKVYVIEIDKSLEPYANKLKEL-----YNNIEIIWGD 104 (295)
T ss_dssp CCHHHHHHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCGGGHHHHHHHHHH-----CSSEEEEESC
T ss_pred CCHHHHHHHHHhcC--CCCcCEEEEECCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHhcc-----CCCeEEEECc
Confidence 34545444444321 236889999999999999999987 46999999999999999999874 2579999999
Q ss_pred CCcCcccccCCccEEEECCCCCCccHHHHHHHH
Q 044572 360 NSIEPLSWLVGSDVLVVDPPRKGLDSSLVHALQ 392 (457)
Q Consensus 360 ~~~~~~~~~~~~D~vi~DPPR~Gl~~~v~~~l~ 392 (457)
+.+.... ...||+||.|+|+.-..+-+.+.+.
T Consensus 105 ~l~~~~~-~~~fD~Iv~NlPy~is~pil~~lL~ 136 (295)
T 3gru_A 105 ALKVDLN-KLDFNKVVANLPYQISSPITFKLIK 136 (295)
T ss_dssp TTTSCGG-GSCCSEEEEECCGGGHHHHHHHHHH
T ss_pred hhhCCcc-cCCccEEEEeCcccccHHHHHHHHh
Confidence 9875322 2369999999998655544444443
No 115
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.04 E-value=9.4e-10 Score=104.32 Aligned_cols=123 Identities=12% Similarity=0.027 Sum_probs=88.4
Q ss_pred CCCCCHHHHHHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCC-CCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEE
Q 044572 277 FGQANTRAFDILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARK-CRSVKCVEINKESQLSFEKTVSRLPKSVDGNISW 355 (457)
Q Consensus 277 FfQ~n~~~~~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~-~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~ 355 (457)
+.+...... .++..+.... ++.+|||+|||+|..++.+|+..+ ..+|++||+++++++.|++|++.. +..+++++
T Consensus 51 ~~~~~~~~~-~~l~~l~~~~-~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~--g~~~~i~~ 126 (237)
T 3c3y_A 51 YMSTSPLAG-QLMSFVLKLV-NAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKA--GVEHKINF 126 (237)
T ss_dssp GGSCCHHHH-HHHHHHHHHT-TCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHT--TCGGGEEE
T ss_pred CCCcCHHHH-HHHHHHHHhh-CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--CCCCcEEE
Confidence 455555554 4445444443 578999999999999999998633 469999999999999999999874 33457999
Q ss_pred EEccCCcCcccc------cCCccEEEECCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 356 HNADNSIEPLSW------LVGSDVLVVDPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 356 ~~~d~~~~~~~~------~~~~D~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
+.+|+.+.+..+ .+.||+|++|.+.... ...++.+..+-.+++++.+.
T Consensus 127 ~~gda~~~l~~l~~~~~~~~~fD~I~~d~~~~~~-~~~l~~~~~~L~pGG~lv~d 180 (237)
T 3c3y_A 127 IESDAMLALDNLLQGQESEGSYDFGFVDADKPNY-IKYHERLMKLVKVGGIVAYD 180 (237)
T ss_dssp EESCHHHHHHHHHHSTTCTTCEEEEEECSCGGGH-HHHHHHHHHHEEEEEEEEEE
T ss_pred EEcCHHHHHHHHHhccCCCCCcCEEEECCchHHH-HHHHHHHHHhcCCCeEEEEe
Confidence 999998754433 3579999999875443 34555554443466666664
No 116
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.03 E-value=3.9e-10 Score=106.84 Aligned_cols=102 Identities=16% Similarity=0.042 Sum_probs=75.8
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCccc--ccCCccEEE
Q 044572 298 YGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLS--WLVGSDVLV 375 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~--~~~~~D~vi 375 (457)
++.+|||+|||+|.+++.+|......+|+|||+|+++++.|++|++.+ +..|++++++|+.+.... ..+.||+|+
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~~~v~~~~~d~~~~~~~~~~~~~fD~V~ 146 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEAL---QLENTTFCHDRAETFGQRKDVRESYDIVT 146 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHH---TCSSEEEEESCHHHHTTCTTTTTCEEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHc---CCCCEEEEeccHHHhcccccccCCccEEE
Confidence 578999999999999999996444568999999999999999999874 235799999998764321 135799999
Q ss_pred ECCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 376 VDPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 376 ~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
++.- .. ...+++.+..+-.+++.+++.
T Consensus 147 ~~~~-~~-~~~~l~~~~~~LkpgG~l~~~ 173 (240)
T 1xdz_A 147 ARAV-AR-LSVLSELCLPLVKKNGLFVAL 173 (240)
T ss_dssp EECC-SC-HHHHHHHHGGGEEEEEEEEEE
T ss_pred Eecc-CC-HHHHHHHHHHhcCCCCEEEEE
Confidence 8763 22 234666664443456665554
No 117
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.03 E-value=1.2e-09 Score=101.11 Aligned_cols=115 Identities=13% Similarity=0.045 Sum_probs=82.0
Q ss_pred CHHHHHHHHHHHHhhCC--CCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEc
Q 044572 281 NTRAFDILLRKLQKYVP--YGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNA 358 (457)
Q Consensus 281 n~~~~~~l~~~i~~~~~--~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~ 358 (457)
+....+.+...+...+. ++.+|||+|||+|.++..++... .+|+|||+++.+++.|++++... .+++++++
T Consensus 32 ~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~ 104 (216)
T 3ofk_A 32 NPFERERHTQLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPHC--KRLTVIDVMPRAIGRACQRTKRW-----SHISWAAT 104 (216)
T ss_dssp CHHHHHHHHHHHHHHTTTSSEEEEEEECCTTSHHHHHHGGGE--EEEEEEESCHHHHHHHHHHTTTC-----SSEEEEEC
T ss_pred CHhHHHHHHHHHHHHcccCCCCcEEEEcCCCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHhcccC-----CCeEEEEc
Confidence 44444444444444433 56799999999999999999863 49999999999999999997652 37999999
Q ss_pred cCCcCcccccCCccEEEECCCCCCcc-----HHHHHHHHhcCCCCcEEEEe
Q 044572 359 DNSIEPLSWLVGSDVLVVDPPRKGLD-----SSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 359 d~~~~~~~~~~~~D~vi~DPPR~Gl~-----~~v~~~l~~~~~~~~ivyvs 404 (457)
|+.+.. ..+.||+|++...-.-+. ..+++.+.++-.+++.++++
T Consensus 105 d~~~~~--~~~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 153 (216)
T 3ofk_A 105 DILQFS--TAELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFG 153 (216)
T ss_dssp CTTTCC--CSCCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred chhhCC--CCCCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 998765 246899999974422111 13455555544477777775
No 118
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.03 E-value=9.5e-10 Score=110.10 Aligned_cols=130 Identities=16% Similarity=0.226 Sum_probs=93.1
Q ss_pred eeEEEEECCCCCCCCCHHH-HHHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhh
Q 044572 266 GGIDISLAPSSFGQANTRA-FDILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSR 344 (457)
Q Consensus 266 ~g~~~~i~~~~FfQ~n~~~-~~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~ 344 (457)
.+..+...++.|.+.+... ++.+++.+.. ..+.+|||+|||+|.+++.+++.....+|++||+|+.+++.|++|++.
T Consensus 165 ~~~~~~~~~gvf~~~~~d~~~~~ll~~l~~--~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~ 242 (343)
T 2pjd_A 165 DGLTVKTLPGVFSRDGLDVGSQLLLSTLTP--HTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAA 242 (343)
T ss_dssp TTEEEEECTTCTTSSSCCHHHHHHHHHSCT--TCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHH
T ss_pred cceEEEecCCccCCCCCcHHHHHHHHhcCc--CCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHH
Confidence 5678888899999877543 3334333211 246799999999999999999865335899999999999999999987
Q ss_pred CCCCCCCcEEEEEccCCcCcccccCCccEEEECCCCC-Ccc------HHHHHHHHhcCCCCcEEEEe
Q 044572 345 LPKSVDGNISWHNADNSIEPLSWLVGSDVLVVDPPRK-GLD------SSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 345 ~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~DPPR~-Gl~------~~v~~~l~~~~~~~~ivyvs 404 (457)
++ . +++++.+|+.+.. .+.||+|+++||.. |.. ..+++.+.+.-.+++.+++.
T Consensus 243 ~~--~--~~~~~~~d~~~~~---~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 302 (343)
T 2pjd_A 243 NG--V--EGEVFASNVFSEV---KGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIV 302 (343)
T ss_dssp TT--C--CCEEEECSTTTTC---CSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred hC--C--CCEEEEccccccc---cCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 42 1 3578899987643 35799999999964 331 23444444433466666665
No 119
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.02 E-value=7.7e-10 Score=109.93 Aligned_cols=108 Identities=15% Similarity=0.087 Sum_probs=80.3
Q ss_pred CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCC-CCcEEEEEccCCcCcccccCCccEEE
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSV-DGNISWHNADNSIEPLSWLVGSDVLV 375 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~-~~nv~~~~~d~~~~~~~~~~~~D~vi 375 (457)
..+.+|||+|||+|.+++.+++..+..+|++||+|+++++.|++|+....++. ..+++++.+|+.+.+....+.||+||
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi 194 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 194 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEE
Confidence 45789999999999999999976456799999999999999999976521111 36899999998775433346799999
Q ss_pred ECCCCC-C----c-cHHHHHHHHhcCCCCcEEEEe
Q 044572 376 VDPPRK-G----L-DSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 376 ~DPPR~-G----l-~~~v~~~l~~~~~~~~ivyvs 404 (457)
+|++-. + + ..++++.+.+.-.+++++.+.
T Consensus 195 ~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 229 (321)
T 2pt6_A 195 VDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQ 229 (321)
T ss_dssp EECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEE
T ss_pred ECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 999521 1 1 256677666554467776664
No 120
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.02 E-value=2e-09 Score=102.21 Aligned_cols=103 Identities=13% Similarity=0.021 Sum_probs=76.7
Q ss_pred CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEE
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVV 376 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~ 376 (457)
.++.+|||+|||+|.+++.+|...+ .+|+|||+++.+++.|+++++.. +..+|++++++|+.+... .+.||+|++
T Consensus 35 ~~~~~VLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~l~~a~~~~~~~--~~~~~v~~~~~d~~~~~~--~~~fD~V~~ 109 (256)
T 1nkv_A 35 KPGTRILDLGSGSGEMLCTWARDHG-ITGTGIDMSSLFTAQAKRRAEEL--GVSERVHFIHNDAAGYVA--NEKCDVAAC 109 (256)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHTC-CEEEEEESCHHHHHHHHHHHHHT--TCTTTEEEEESCCTTCCC--SSCEEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhcC-CeEEEEeCCHHHHHHHHHHHHhc--CCCcceEEEECChHhCCc--CCCCCEEEE
Confidence 4788999999999999999998653 48999999999999999999874 334589999999987643 467999997
Q ss_pred CCCC--CCccHHHHHHHHhcCCCCcEEEEe
Q 044572 377 DPPR--KGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 377 DPPR--~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
.-.- ..-...+++.+.+.-.+++.++++
T Consensus 110 ~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~ 139 (256)
T 1nkv_A 110 VGATWIAGGFAGAEELLAQSLKPGGIMLIG 139 (256)
T ss_dssp ESCGGGTSSSHHHHHHHTTSEEEEEEEEEE
T ss_pred CCChHhcCCHHHHHHHHHHHcCCCeEEEEe
Confidence 3221 001234566665544466666664
No 121
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.02 E-value=1.5e-09 Score=101.21 Aligned_cols=102 Identities=17% Similarity=-0.004 Sum_probs=72.6
Q ss_pred CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCc--ccccCCccEE
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEP--LSWLVGSDVL 374 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~--~~~~~~~D~v 374 (457)
.++.+|||+|||+|.++..+|...+..+|+|||+|+.|++.+.++++.. .|+.++.+|+.... ....+.||+|
T Consensus 56 ~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~-----~~v~~~~~d~~~~~~~~~~~~~fD~V 130 (210)
T 1nt2_A 56 RGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER-----NNIIPLLFDASKPWKYSGIVEKVDLI 130 (210)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC-----SSEEEECSCTTCGGGTTTTCCCEEEE
T ss_pred CCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC-----CCeEEEEcCCCCchhhcccccceeEE
Confidence 4688999999999999999998754459999999999998888777652 47899999987631 1123679999
Q ss_pred EECCCCCCccHHHHHHHHh-cCCCCcEEEEe
Q 044572 375 VVDPPRKGLDSSLVHALQS-IGSAERKAKSL 404 (457)
Q Consensus 375 i~DPPR~Gl~~~v~~~l~~-~~~~~~ivyvs 404 (457)
++|-+.......+++.+.+ ++ +++.++++
T Consensus 131 ~~~~~~~~~~~~~l~~~~r~Lk-pgG~l~i~ 160 (210)
T 1nt2_A 131 YQDIAQKNQIEILKANAEFFLK-EKGEVVIM 160 (210)
T ss_dssp EECCCSTTHHHHHHHHHHHHEE-EEEEEEEE
T ss_pred EEeccChhHHHHHHHHHHHHhC-CCCEEEEE
Confidence 9996433211222444444 54 55555554
No 122
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.02 E-value=1.4e-09 Score=105.13 Aligned_cols=119 Identities=18% Similarity=0.060 Sum_probs=83.8
Q ss_pred CCCCeEEEEcccccHHHHHHHhhC-CCCEEEEEeCCHHHHHHHHHHHhhC-CCCCCCcEEEEEccCCcCcccccCCccEE
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAAR-KCRSVKCVEINKESQLSFEKTVSRL-PKSVDGNISWHNADNSIEPLSWLVGSDVL 374 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~-~~~~V~gVE~~~~av~~A~~Na~~~-~~~~~~nv~~~~~d~~~~~~~~~~~~D~v 374 (457)
.++.+|||+|||+|.+++.++... ...+|+++|+++++++.|++|++.+ + ...++++++.+|+.+.... ...||+|
T Consensus 98 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g-~~~~~v~~~~~d~~~~~~~-~~~~D~v 175 (280)
T 1i9g_A 98 FPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYG-QPPDNWRLVVSDLADSELP-DGSVDRA 175 (280)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHT-SCCTTEEEECSCGGGCCCC-TTCEEEE
T ss_pred CCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC-CCCCcEEEEECchHhcCCC-CCceeEE
Confidence 468899999999999999999852 2469999999999999999998763 1 1246899999999775321 3579999
Q ss_pred EECCCCCCccHHHHHHHHhcCCCCcEEEEeccCCCCCchhchhhHHHHHHH
Q 044572 375 VVDPPRKGLDSSLVHALQSIGSAERKAKSLSESSSSMVKEEKRPWILRAKE 425 (457)
Q Consensus 375 i~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs~~~~~c~~~~~~~~~~~~~~~ 425 (457)
++|+|.. ..+++.+.+...+++.++++ +........+...++.
T Consensus 176 ~~~~~~~---~~~l~~~~~~L~pgG~l~~~-----~~~~~~~~~~~~~l~~ 218 (280)
T 1i9g_A 176 VLDMLAP---WEVLDAVSRLLVAGGVLMVY-----VATVTQLSRIVEALRA 218 (280)
T ss_dssp EEESSCG---GGGHHHHHHHEEEEEEEEEE-----ESSHHHHHHHHHHHHH
T ss_pred EECCcCH---HHHHHHHHHhCCCCCEEEEE-----eCCHHHHHHHHHHHHh
Confidence 9999832 13555555433356666665 3333344455554443
No 123
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.02 E-value=1.9e-09 Score=100.73 Aligned_cols=119 Identities=16% Similarity=0.060 Sum_probs=85.4
Q ss_pred HHHHHHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCC-----CCEEEEEeCCHHHHHHHHHHHhhCCC--CCCCcEE
Q 044572 282 TRAFDILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARK-----CRSVKCVEINKESQLSFEKTVSRLPK--SVDGNIS 354 (457)
Q Consensus 282 ~~~~~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~-----~~~V~gVE~~~~av~~A~~Na~~~~~--~~~~nv~ 354 (457)
+.....+++.+...+.++.+|||+|||+|.+++.++...+ ..+|++||+++++++.|++|++.++. ....+++
T Consensus 64 p~~~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~ 143 (227)
T 2pbf_A 64 PHMHALSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFK 143 (227)
T ss_dssp HHHHHHHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEE
T ss_pred hHHHHHHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEE
Confidence 4455556665543455789999999999999999998642 24999999999999999999876320 0036899
Q ss_pred EEEccCCcCcc---cccCCccEEEECCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 355 WHNADNSIEPL---SWLVGSDVLVVDPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 355 ~~~~d~~~~~~---~~~~~~D~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
++.+|+.+... .....||+|+++.+...+...+. ..++ +++.++++
T Consensus 144 ~~~~d~~~~~~~~~~~~~~fD~I~~~~~~~~~~~~~~---~~Lk-pgG~lv~~ 192 (227)
T 2pbf_A 144 IIHKNIYQVNEEEKKELGLFDAIHVGASASELPEILV---DLLA-ENGKLIIP 192 (227)
T ss_dssp EEECCGGGCCHHHHHHHCCEEEEEECSBBSSCCHHHH---HHEE-EEEEEEEE
T ss_pred EEECChHhcccccCccCCCcCEEEECCchHHHHHHHH---HhcC-CCcEEEEE
Confidence 99999987531 11367999999998765543332 2344 66666665
No 124
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.01 E-value=2.2e-09 Score=101.81 Aligned_cols=108 Identities=11% Similarity=0.040 Sum_probs=77.1
Q ss_pred CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhC---CCCCCCcEEEEEccCCcCcccc--cCCc
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRL---PKSVDGNISWHNADNSIEPLSW--LVGS 371 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~---~~~~~~nv~~~~~d~~~~~~~~--~~~~ 371 (457)
.++.+|||+|||+|.+++.+|.......|+|||+++.+++.|++|++.+ ..+...|++++++|+.+.+... .+.+
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~ 124 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQL 124 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCE
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCe
Confidence 3567899999999999999998655568999999999999999987531 0123468999999998744321 3579
Q ss_pred cEEEECCC---C-------CCccHHHHHHHHhcCCCCcEEEEe
Q 044572 372 DVLVVDPP---R-------KGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 372 D~vi~DPP---R-------~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
|.|++.-| . .-....+++.+...-.+++.+++.
T Consensus 125 D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~ 167 (235)
T 3ckk_A 125 TKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTI 167 (235)
T ss_dssp EEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEE
Confidence 98877533 1 112245676666654477777775
No 125
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.00 E-value=4.8e-09 Score=99.62 Aligned_cols=104 Identities=11% Similarity=0.046 Sum_probs=78.7
Q ss_pred CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEE
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVV 376 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~ 376 (457)
.++.+|||+|||+|.+++.++...+ .+|+|||+|+.+++.|++|++.+ +..++++++++|+.+.... .+.||+|++
T Consensus 45 ~~~~~vLDiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~~~~d~~~~~~~-~~~fD~v~~ 120 (257)
T 3f4k_A 45 TDDAKIADIGCGTGGQTLFLADYVK-GQITGIDLFPDFIEIFNENAVKA--NCADRVKGITGSMDNLPFQ-NEELDLIWS 120 (257)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHCC-SEEEEEESCHHHHHHHHHHHHHT--TCTTTEEEEECCTTSCSSC-TTCEEEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHhCC-CeEEEEECCHHHHHHHHHHHHHc--CCCCceEEEECChhhCCCC-CCCEEEEEe
Confidence 3678999999999999999998754 49999999999999999999874 3345699999999765321 367999998
Q ss_pred CCCCCCcc-HHHHHHHHhcCCCCcEEEEe
Q 044572 377 DPPRKGLD-SSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 377 DPPR~Gl~-~~v~~~l~~~~~~~~ivyvs 404 (457)
+-.-.-++ ..+++.+.+.-.+++.++++
T Consensus 121 ~~~l~~~~~~~~l~~~~~~L~pgG~l~~~ 149 (257)
T 3f4k_A 121 EGAIYNIGFERGMNEWSKYLKKGGFIAVS 149 (257)
T ss_dssp ESCSCCCCHHHHHHHHHTTEEEEEEEEEE
T ss_pred cChHhhcCHHHHHHHHHHHcCCCcEEEEE
Confidence 76533222 34666666544467777665
No 126
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=98.99 E-value=6.5e-09 Score=101.57 Aligned_cols=101 Identities=16% Similarity=0.126 Sum_probs=73.0
Q ss_pred CCCCCeEEEEcccccHHH-HHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEE
Q 044572 296 VPYGASVTDLYAGAGVIG-LSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVL 374 (457)
Q Consensus 296 ~~~~~~vLDl~cG~G~~s-l~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~v 374 (457)
+.++++|||+|||+|.++ +.+|+.. ..+|+|||+|+++++.|++|++.. +. ++++|+++|+.+.. ...||+|
T Consensus 120 l~~g~rVLDIGcG~G~~ta~~lA~~~-ga~V~gIDis~~~l~~Ar~~~~~~--gl-~~v~~v~gDa~~l~---d~~FDvV 192 (298)
T 3fpf_A 120 FRRGERAVFIGGGPLPLTGILLSHVY-GMRVNVVEIEPDIAELSRKVIEGL--GV-DGVNVITGDETVID---GLEFDVL 192 (298)
T ss_dssp CCTTCEEEEECCCSSCHHHHHHHHTT-CCEEEEEESSHHHHHHHHHHHHHH--TC-CSEEEEESCGGGGG---GCCCSEE
T ss_pred CCCcCEEEEECCCccHHHHHHHHHcc-CCEEEEEECCHHHHHHHHHHHHhc--CC-CCeEEEECchhhCC---CCCcCEE
Confidence 357999999999999765 5566533 358999999999999999999874 23 78999999998753 3689999
Q ss_pred EECCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 375 VVDPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 375 i~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
+++=-- .-..++++.+.+.-.+++.+.+.
T Consensus 193 ~~~a~~-~d~~~~l~el~r~LkPGG~Lvv~ 221 (298)
T 3fpf_A 193 MVAALA-EPKRRVFRNIHRYVDTETRIIYR 221 (298)
T ss_dssp EECTTC-SCHHHHHHHHHHHCCTTCEEEEE
T ss_pred EECCCc-cCHHHHHHHHHHHcCCCcEEEEE
Confidence 986321 11225666665543355555443
No 127
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.99 E-value=1.7e-09 Score=103.56 Aligned_cols=114 Identities=14% Similarity=0.151 Sum_probs=78.4
Q ss_pred CCHHHHHHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEcc
Q 044572 280 ANTRAFDILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNAD 359 (457)
Q Consensus 280 ~n~~~~~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d 359 (457)
.+....+.+++.+. ..++.+|||+|||+|.++..++.. ++.+|+|||+|+.+++.+++| . ..|++++++|
T Consensus 15 ~d~~i~~~iv~~~~--~~~~~~VLDiG~G~G~lt~~L~~~-~~~~v~avEid~~~~~~~~~~-~------~~~v~~i~~D 84 (249)
T 3ftd_A 15 VSEGVLKKIAEELN--IEEGNTVVEVGGGTGNLTKVLLQH-PLKKLYVIELDREMVENLKSI-G------DERLEVINED 84 (249)
T ss_dssp ECHHHHHHHHHHTT--CCTTCEEEEEESCHHHHHHHHTTS-CCSEEEEECCCHHHHHHHTTS-C------CTTEEEECSC
T ss_pred CCHHHHHHHHHhcC--CCCcCEEEEEcCchHHHHHHHHHc-CCCeEEEEECCHHHHHHHHhc-c------CCCeEEEEcc
Confidence 34444444444321 136889999999999999999975 457999999999999999876 2 2479999999
Q ss_pred CCcCcccccCCccEEEECCCCCCccHHHHHHHHhcCCCCcEEEE
Q 044572 360 NSIEPLSWLVGSDVLVVDPPRKGLDSSLVHALQSIGSAERKAKS 403 (457)
Q Consensus 360 ~~~~~~~~~~~~D~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyv 403 (457)
+.+..........+|+.|||+.-.++-+.+.+.........+.+
T Consensus 85 ~~~~~~~~~~~~~~vv~NlPy~i~~~il~~ll~~~~~~~~~~~m 128 (249)
T 3ftd_A 85 ASKFPFCSLGKELKVVGNLPYNVASLIIENTVYNKDCVPLAVFM 128 (249)
T ss_dssp TTTCCGGGSCSSEEEEEECCTTTHHHHHHHHHHTGGGCSEEEEE
T ss_pred hhhCChhHccCCcEEEEECchhccHHHHHHHHhcCCCCceEEEE
Confidence 98764322112348999999976555455555433223444444
No 128
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.99 E-value=9.4e-10 Score=100.41 Aligned_cols=87 Identities=9% Similarity=0.093 Sum_probs=67.9
Q ss_pred HHHHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcC
Q 044572 284 AFDILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIE 363 (457)
Q Consensus 284 ~~~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~ 363 (457)
..+.+|..+.+++.+..+|||+|||+|.+++.++......+|+|+|+|+.|++.|++|+..++ ...++++ .|....
T Consensus 35 ~ld~fY~~~~~~l~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g--~~~~v~~--~d~~~~ 110 (200)
T 3fzg_A 35 TLNDFYTYVFGNIKHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLK--TTIKYRF--LNKESD 110 (200)
T ss_dssp GHHHHHHHHHHHSCCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSC--CSSEEEE--ECCHHH
T ss_pred hHHHHHHHHHhhcCCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcC--CCccEEE--eccccc
Confidence 456778888888887889999999999999999765444599999999999999999999843 2236776 555332
Q ss_pred cccccCCccEEEE
Q 044572 364 PLSWLVGSDVLVV 376 (457)
Q Consensus 364 ~~~~~~~~D~vi~ 376 (457)
. ....||+|++
T Consensus 111 ~--~~~~~DvVLa 121 (200)
T 3fzg_A 111 V--YKGTYDVVFL 121 (200)
T ss_dssp H--TTSEEEEEEE
T ss_pred C--CCCCcChhhH
Confidence 1 2356898876
No 129
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.99 E-value=1.8e-09 Score=102.17 Aligned_cols=121 Identities=11% Similarity=0.021 Sum_probs=85.1
Q ss_pred CCCHHHHHHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCC-CCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEE
Q 044572 279 QANTRAFDILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARK-CRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHN 357 (457)
Q Consensus 279 Q~n~~~~~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~-~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~ 357 (457)
+.++...+.+... ... .++.+|||+|||+|.+++.+|+..+ ..+|++||+++.+++.|++|++.++ ..++++++.
T Consensus 43 ~~~~~~~~~l~~l-~~~-~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g--~~~~v~~~~ 118 (239)
T 2hnk_A 43 QISPEEGQFLNIL-TKI-SGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENG--LENKIFLKL 118 (239)
T ss_dssp SCCHHHHHHHHHH-HHH-HTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTT--CGGGEEEEE
T ss_pred ccCHHHHHHHHHH-HHh-hCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--CCCCEEEEE
Confidence 3455555554443 332 3678999999999999999998743 4699999999999999999998742 234599999
Q ss_pred ccCCcCcccc---------------c-CCccEEEECCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 358 ADNSIEPLSW---------------L-VGSDVLVVDPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 358 ~d~~~~~~~~---------------~-~~~D~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
+|+.+.+... . +.||+|++|....... ..++.+.++-.+++++++.
T Consensus 119 ~d~~~~~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~~~~~~-~~l~~~~~~L~pgG~lv~~ 180 (239)
T 2hnk_A 119 GSALETLQVLIDSKSAPSWASDFAFGPSSIDLFFLDADKENYP-NYYPLILKLLKPGGLLIAD 180 (239)
T ss_dssp SCHHHHHHHHHHCSSCCGGGTTTCCSTTCEEEEEECSCGGGHH-HHHHHHHHHEEEEEEEEEE
T ss_pred CCHHHHHHHHHhhcccccccccccCCCCCcCEEEEeCCHHHHH-HHHHHHHHHcCCCeEEEEE
Confidence 9987643322 1 5799999997644333 3444444433467777765
No 130
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.99 E-value=4.7e-09 Score=108.00 Aligned_cols=126 Identities=16% Similarity=0.146 Sum_probs=84.1
Q ss_pred CCCCCCCHHHHHHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHH-------HHHHhhCCC
Q 044572 275 SSFGQANTRAFDILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSF-------EKTVSRLPK 347 (457)
Q Consensus 275 ~~FfQ~n~~~~~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A-------~~Na~~~~~ 347 (457)
..+-|........+++.+ . +.++.+|||+|||+|.+++.+|...++.+|+|||+++.+++.| ++|++.++
T Consensus 221 ~~yGet~p~~v~~ml~~l-~-l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~G- 297 (433)
T 1u2z_A 221 YVYGELLPNFLSDVYQQC-Q-LKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYG- 297 (433)
T ss_dssp GCCCCBCHHHHHHHHHHT-T-CCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTT-
T ss_pred cccccccHHHHHHHHHhc-C-CCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcC-
Confidence 344455555555555432 1 2478999999999999999999876667999999999999999 88988732
Q ss_pred CC-CCcEEEEEccCCcCc---ccccCCccEEEECCCCCCcc-HHHHHHHHhcCCCCcEEEEe
Q 044572 348 SV-DGNISWHNADNSIEP---LSWLVGSDVLVVDPPRKGLD-SSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 348 ~~-~~nv~~~~~d~~~~~---~~~~~~~D~vi~DPPR~Gl~-~~v~~~l~~~~~~~~ivyvs 404 (457)
. ..|++++++|..... ......||+|+++..-.+-+ ..+++.+.+...+++.+++.
T Consensus 298 -l~~~nV~~i~gD~~~~~~~~~~~~~~FDvIvvn~~l~~~d~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 298 -MRLNNVEFSLKKSFVDNNRVAELIPQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp -BCCCCEEEEESSCSTTCHHHHHHGGGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEES
T ss_pred -CCCCceEEEEcCccccccccccccCCCCEEEEeCccccccHHHHHHHHHHhCCCCeEEEEe
Confidence 2 368999998765321 11135799999985432211 12333444433466666664
No 131
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=98.99 E-value=1.7e-09 Score=99.48 Aligned_cols=100 Identities=14% Similarity=0.080 Sum_probs=76.0
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEEC
Q 044572 298 YGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVVD 377 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~D 377 (457)
++.+|||+|||+|.+++.++...+..+|+|+|+++.+++.|++|++.+ ...+++++++|+.+... .+.||+|+++
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~~~v~~~~~d~~~~~~--~~~~D~i~~~ 139 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHEL---KLENIEPVQSRVEEFPS--EPPFDGVISR 139 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHT---TCSSEEEEECCTTTSCC--CSCEEEEECS
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHc---CCCCeEEEecchhhCCc--cCCcCEEEEe
Confidence 478999999999999999998655569999999999999999999873 33569999999987542 2579999986
Q ss_pred CCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 378 PPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 378 PPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
.- .. ...+++.+...-.+++.+++.
T Consensus 140 ~~-~~-~~~~l~~~~~~L~~gG~l~~~ 164 (207)
T 1jsx_A 140 AF-AS-LNDMVSWCHHLPGEQGRFYAL 164 (207)
T ss_dssp CS-SS-HHHHHHHHTTSEEEEEEEEEE
T ss_pred cc-CC-HHHHHHHHHHhcCCCcEEEEE
Confidence 42 11 134555555543466666664
No 132
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=98.99 E-value=6.6e-09 Score=101.64 Aligned_cols=112 Identities=8% Similarity=-0.023 Sum_probs=82.2
Q ss_pred HHHHHHHHhhC--CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcC
Q 044572 286 DILLRKLQKYV--PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIE 363 (457)
Q Consensus 286 ~~l~~~i~~~~--~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~ 363 (457)
...+..+.+.+ .++.+|||+|||+|.+++.+++..+ .+|+|||+|+.+++.|+++++.+ +..++++++.+|+.+.
T Consensus 58 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~ 134 (302)
T 3hem_A 58 YAKRKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEV--DSPRRKEVRIQGWEEF 134 (302)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHS--CCSSCEEEEECCGGGC
T ss_pred HHHHHHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhc--CCCCceEEEECCHHHc
Confidence 34455555554 3688999999999999999998644 58999999999999999999874 3345899999999765
Q ss_pred cccccCCccEEEECCCCC---------Ccc--HHHHHHHHhcCCCCcEEEEe
Q 044572 364 PLSWLVGSDVLVVDPPRK---------GLD--SSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 364 ~~~~~~~~D~vi~DPPR~---------Gl~--~~v~~~l~~~~~~~~ivyvs 404 (457)
.+.||+|++.-.-. |.. ..+++.+.++-.+++.+++.
T Consensus 135 ----~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 182 (302)
T 3hem_A 135 ----DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLH 182 (302)
T ss_dssp ----CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEE
T ss_pred ----CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence 46899998853211 111 34666666654566666665
No 133
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=98.99 E-value=6.5e-09 Score=98.38 Aligned_cols=102 Identities=18% Similarity=0.027 Sum_probs=71.9
Q ss_pred CCCCeEEEEcccccHHHHHHHhhCC-CCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcc--cccCCccE
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAARK-CRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPL--SWLVGSDV 373 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~~-~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~--~~~~~~D~ 373 (457)
.+|++|||+|||+|.++..+|...+ ..+|+|||+++.+++.+.+.++.. .|+.++.+|+..... ...+.||+
T Consensus 75 ~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r-----~nv~~i~~Da~~~~~~~~~~~~~D~ 149 (232)
T 3id6_C 75 RKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR-----PNIFPLLADARFPQSYKSVVENVDV 149 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC-----TTEEEEECCTTCGGGTTTTCCCEEE
T ss_pred CCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc-----CCeEEEEcccccchhhhccccceEE
Confidence 4799999999999999999997643 459999999999987766665541 479999999875321 12357999
Q ss_pred EEECCCCCCccHHHHHHHH-hcCCCCcEEEE
Q 044572 374 LVVDPPRKGLDSSLVHALQ-SIGSAERKAKS 403 (457)
Q Consensus 374 vi~DPPR~Gl~~~v~~~l~-~~~~~~~ivyv 403 (457)
|++|-+-......+...+. .+++.++++++
T Consensus 150 I~~d~a~~~~~~il~~~~~~~LkpGG~lvis 180 (232)
T 3id6_C 150 LYVDIAQPDQTDIAIYNAKFFLKVNGDMLLV 180 (232)
T ss_dssp EEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEecCCChhHHHHHHHHHHHhCCCCeEEEEE
Confidence 9999775332222334444 46544444443
No 134
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=98.98 E-value=2.9e-09 Score=106.94 Aligned_cols=101 Identities=16% Similarity=0.122 Sum_probs=77.4
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEEC
Q 044572 298 YGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVVD 377 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~D 377 (457)
++.+|||+|||+|.+++.+|+. ++.+|+|||+| ++++.|++|++.+ +..++++++++|+.+.... .+.||+|+.+
T Consensus 66 ~~~~VLDvGcG~G~~~~~la~~-g~~~v~gvD~s-~~l~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~-~~~fD~Iis~ 140 (349)
T 3q7e_A 66 KDKVVLDVGSGTGILCMFAAKA-GARKVIGIECS-SISDYAVKIVKAN--KLDHVVTIIKGKVEEVELP-VEKVDIIISE 140 (349)
T ss_dssp TTCEEEEESCTTSHHHHHHHHT-TCSEEEEEECS-THHHHHHHHHHHT--TCTTTEEEEESCTTTCCCS-SSCEEEEEEC
T ss_pred CCCEEEEEeccchHHHHHHHHC-CCCEEEEECcH-HHHHHHHHHHHHc--CCCCcEEEEECcHHHccCC-CCceEEEEEc
Confidence 6899999999999999999985 67799999999 5999999999874 3345699999999876321 3679999999
Q ss_pred CCC-----CCccHHHHHHHHhcCCCCcEEEE
Q 044572 378 PPR-----KGLDSSLVHALQSIGSAERKAKS 403 (457)
Q Consensus 378 PPR-----~Gl~~~v~~~l~~~~~~~~ivyv 403 (457)
+.- ......+++.+.++-.++++++.
T Consensus 141 ~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 141 WMGYCLFYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp CCBBTBTBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred cccccccCchhHHHHHHHHHHhCCCCCEEcc
Confidence 852 23334566666543346666543
No 135
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.97 E-value=2.2e-09 Score=107.21 Aligned_cols=108 Identities=14% Similarity=0.084 Sum_probs=80.5
Q ss_pred CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCC-CCCcEEEEEccCCcCcccc-cCCccEE
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKS-VDGNISWHNADNSIEPLSW-LVGSDVL 374 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~-~~~nv~~~~~d~~~~~~~~-~~~~D~v 374 (457)
....+|||+|||+|.+++.+++..+..+|++||+|+.+++.|++|+..+..+ ...+++++.+|+.+.+... .+.||+|
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlI 198 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAV 198 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEE
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEE
Confidence 4578999999999999999997644579999999999999999997642001 1358999999987754332 2579999
Q ss_pred EECCCCC-C----c-cHHHHHHHHhcCCCCcEEEEe
Q 044572 375 VVDPPRK-G----L-DSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 375 i~DPPR~-G----l-~~~v~~~l~~~~~~~~ivyvs 404 (457)
|+|++-. + + ..++++.+.+.-.+++++.+.
T Consensus 199 i~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 199 IVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp EECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred EECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 9998731 1 1 346676666654577777775
No 136
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.97 E-value=4.1e-09 Score=104.99 Aligned_cols=134 Identities=13% Similarity=0.093 Sum_probs=87.0
Q ss_pred HHHHHHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCCC-CEEEEEeCCHHHHHHHHHHHhhCC-----CC---CCCc
Q 044572 282 TRAFDILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARKC-RSVKCVEINKESQLSFEKTVSRLP-----KS---VDGN 352 (457)
Q Consensus 282 ~~~~~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~-~~V~gVE~~~~av~~A~~Na~~~~-----~~---~~~n 352 (457)
+.....++..+ . +.++.+|||+|||+|.+++.+++..+. .+|+|+|+++.+++.|++|++..+ ++ ...+
T Consensus 91 ~~~~~~~l~~l-~-~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~ 168 (336)
T 2b25_A 91 PKDINMILSMM-D-INPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDN 168 (336)
T ss_dssp HHHHHHHHHHH-T-CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCC
T ss_pred HHHHHHHHHhc-C-CCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCc
Confidence 33344444433 2 347899999999999999999986433 699999999999999999987421 11 1358
Q ss_pred EEEEEccCCcCcccc-cCCccEEEECCCCCCccHHHHHHHHhcCCCCcEEEEeccCCCCCchhchhhHHHHHHH
Q 044572 353 ISWHNADNSIEPLSW-LVGSDVLVVDPPRKGLDSSLVHALQSIGSAERKAKSLSESSSSMVKEEKRPWILRAKE 425 (457)
Q Consensus 353 v~~~~~d~~~~~~~~-~~~~D~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs~~~~~c~~~~~~~~~~~~~~~ 425 (457)
++++.+|+.+....+ ...||+|++|+|..- .+++.+.+.-.+++.+++. +........+.+.++.
T Consensus 169 v~~~~~d~~~~~~~~~~~~fD~V~~~~~~~~---~~l~~~~~~LkpgG~lv~~-----~~~~~~~~~~~~~l~~ 234 (336)
T 2b25_A 169 VDFIHKDISGATEDIKSLTFDAVALDMLNPH---VTLPVFYPHLKHGGVCAVY-----VVNITQVIELLDGIRT 234 (336)
T ss_dssp EEEEESCTTCCC-------EEEEEECSSSTT---TTHHHHGGGEEEEEEEEEE-----ESSHHHHHHHHHHHHH
T ss_pred eEEEECChHHcccccCCCCeeEEEECCCCHH---HHHHHHHHhcCCCcEEEEE-----eCCHHHHHHHHHHHHh
Confidence 999999998764222 246999999987432 2444444433356655554 3333444555554443
No 137
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.97 E-value=1.7e-09 Score=102.06 Aligned_cols=121 Identities=11% Similarity=0.003 Sum_probs=85.4
Q ss_pred CCCHHHHHHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCC-CCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEE
Q 044572 279 QANTRAFDILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARK-CRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHN 357 (457)
Q Consensus 279 Q~n~~~~~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~-~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~ 357 (457)
+.+......+ ..+... .++.+|||+|||+|..++.+|...+ ..+|++||+++++++.|++|++.+ +..++++++.
T Consensus 55 ~~~~~~~~~l-~~l~~~-~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~--g~~~~i~~~~ 130 (232)
T 3cbg_A 55 QISPEQAQFL-GLLISL-TGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKA--GVAEKISLRL 130 (232)
T ss_dssp SCCHHHHHHH-HHHHHH-HTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHH--TCGGGEEEEE
T ss_pred CcCHHHHHHH-HHHHHh-cCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--CCCCcEEEEE
Confidence 5556555444 333333 2578999999999999999997533 359999999999999999998874 2335799999
Q ss_pred ccCCcCccccc-----CCccEEEECCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 358 ADNSIEPLSWL-----VGSDVLVVDPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 358 ~d~~~~~~~~~-----~~~D~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
+|+.+.+..+. +.||+|++|.+..... ..++.+..+-.+++++++.
T Consensus 131 ~d~~~~l~~l~~~~~~~~fD~V~~d~~~~~~~-~~l~~~~~~LkpgG~lv~~ 181 (232)
T 3cbg_A 131 GPALATLEQLTQGKPLPEFDLIFIDADKRNYP-RYYEIGLNLLRRGGLMVID 181 (232)
T ss_dssp SCHHHHHHHHHTSSSCCCEEEEEECSCGGGHH-HHHHHHHHTEEEEEEEEEE
T ss_pred cCHHHHHHHHHhcCCCCCcCEEEECCCHHHHH-HHHHHHHHHcCCCeEEEEe
Confidence 99876443321 5799999998743332 3455554443467766664
No 138
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=98.97 E-value=3.7e-09 Score=99.04 Aligned_cols=108 Identities=15% Similarity=0.065 Sum_probs=80.2
Q ss_pred HHHHhhC---CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCccc
Q 044572 290 RKLQKYV---PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLS 366 (457)
Q Consensus 290 ~~i~~~~---~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~ 366 (457)
+.+.+.+ .++.+|||+|||+|.++..++......+|+|||+|+.+++.|++++... .+++++++|+.+....
T Consensus 33 ~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~d~~~~~~~ 107 (234)
T 3dtn_A 33 GVSVSIASVDTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGN-----LKVKYIEADYSKYDFE 107 (234)
T ss_dssp HHHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSC-----TTEEEEESCTTTCCCC
T ss_pred HHHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccC-----CCEEEEeCchhccCCC
Confidence 4444443 2578999999999999999998754569999999999999999987652 2899999999876533
Q ss_pred ccCCccEEEECCCCCCccH----HHHHHHHhcCCCCcEEEEe
Q 044572 367 WLVGSDVLVVDPPRKGLDS----SLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 367 ~~~~~D~vi~DPPR~Gl~~----~v~~~l~~~~~~~~ivyvs 404 (457)
+.||+|++...-.-+.. .+++.+.+.-.+++.++++
T Consensus 108 --~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 147 (234)
T 3dtn_A 108 --EKYDMVVSALSIHHLEDEDKKELYKRSYSILKESGIFINA 147 (234)
T ss_dssp --SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred --CCceEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 68999999876433332 2555555543466666664
No 139
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.96 E-value=3.5e-09 Score=115.70 Aligned_cols=95 Identities=11% Similarity=0.067 Sum_probs=72.2
Q ss_pred HHHHHHHHHhhC--CCCCeEEEEcccccHHHHHHHhhCC-----------------------------------------
Q 044572 285 FDILLRKLQKYV--PYGASVTDLYAGAGVIGLSLAAARK----------------------------------------- 321 (457)
Q Consensus 285 ~~~l~~~i~~~~--~~~~~vLDl~cG~G~~sl~lA~~~~----------------------------------------- 321 (457)
.+.|...++... .++..|||.+||||+|.+.+|..+.
T Consensus 175 ~e~LAa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~ 254 (703)
T 3v97_A 175 KETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAE 254 (703)
T ss_dssp CHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhcccc
Confidence 344445444443 3678999999999999999987520
Q ss_pred -CCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCccccc-CCccEEEECCCCC
Q 044572 322 -CRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWL-VGSDVLVVDPPRK 381 (457)
Q Consensus 322 -~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~-~~~D~vi~DPPR~ 381 (457)
..+|+|+|+++.|++.|++|++.+ +..+.++|.++|+.+...... +.||+||.|||+.
T Consensus 255 ~~~~i~G~Did~~av~~A~~N~~~a--gv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG 314 (703)
T 3v97_A 255 YSSHFYGSDSDARVIQRARTNARLA--GIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYG 314 (703)
T ss_dssp CCCCEEEEESCHHHHHHHHHHHHHT--TCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCC
T ss_pred CCccEEEEECCHHHHHHHHHHHHHc--CCCCceEEEECChhhCccccccCCCCEEEeCCCcc
Confidence 137999999999999999999984 334569999999987533222 2799999999963
No 140
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.96 E-value=2.1e-09 Score=106.43 Aligned_cols=108 Identities=16% Similarity=0.068 Sum_probs=78.7
Q ss_pred CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCC-CCcEEEEEccCCcCcccccCCccEEE
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSV-DGNISWHNADNSIEPLSWLVGSDVLV 375 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~-~~nv~~~~~d~~~~~~~~~~~~D~vi 375 (457)
....+|||+|||+|.++..+++..+..+|++||+++.+++.|++|+.....+. ..+++++.+|+.+.+....+.||+||
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 186 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVII 186 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEE
Confidence 45689999999999999999976445799999999999999999976421111 36899999999775443346799999
Q ss_pred ECCCCC-----Cc-cHHHHHHHHhcCCCCcEEEEe
Q 044572 376 VDPPRK-----GL-DSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 376 ~DPPR~-----Gl-~~~v~~~l~~~~~~~~ivyvs 404 (457)
+|++-. ++ ..++++.+.+.-.+++++.+.
T Consensus 187 ~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~ 221 (314)
T 2b2c_A 187 TDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQ 221 (314)
T ss_dssp ECCC-------------HHHHHHHHEEEEEEEEEE
T ss_pred EcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEE
Confidence 999631 11 145666665554577777775
No 141
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=98.96 E-value=5.6e-09 Score=100.11 Aligned_cols=104 Identities=9% Similarity=0.016 Sum_probs=78.8
Q ss_pred CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEE
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVV 376 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~ 376 (457)
.++.+|||+|||+|.+++.++.. +..+|+|||+|+.+++.|+++++.. +..++++++++|+.+.... .+.||+|++
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~-~~~fD~i~~ 120 (267)
T 3kkz_A 45 TEKSLIADIGCGTGGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQS--GLQNRVTGIVGSMDDLPFR-NEELDLIWS 120 (267)
T ss_dssp CTTCEEEEETCTTCHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHHHT--TCTTTEEEEECCTTSCCCC-TTCEEEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHHc--CCCcCcEEEEcChhhCCCC-CCCEEEEEE
Confidence 46889999999999999999986 4569999999999999999998874 3346799999999775321 367999999
Q ss_pred CCCCCCcc-HHHHHHHHhcCCCCcEEEEe
Q 044572 377 DPPRKGLD-SSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 377 DPPR~Gl~-~~v~~~l~~~~~~~~ivyvs 404 (457)
...-.-++ ..+++.+.+.-.+++.++++
T Consensus 121 ~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 149 (267)
T 3kkz_A 121 EGAIYNIGFERGLNEWRKYLKKGGYLAVS 149 (267)
T ss_dssp SSCGGGTCHHHHHHHHGGGEEEEEEEEEE
T ss_pred cCCceecCHHHHHHHHHHHcCCCCEEEEE
Confidence 77632222 24555555544466666665
No 142
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.95 E-value=2.2e-09 Score=106.24 Aligned_cols=108 Identities=11% Similarity=-0.019 Sum_probs=81.5
Q ss_pred CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCC--CCCcEEEEEccCCcCcccccCCccEE
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKS--VDGNISWHNADNSIEPLSWLVGSDVL 374 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~--~~~nv~~~~~d~~~~~~~~~~~~D~v 374 (457)
....+|||+|||+|.++..+++..+..+|++||+++.+++.|++|+...+.+ ...+++++.+|+.+.+....+.||+|
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 4578999999999999999997645679999999999999999997531101 13689999999987544334679999
Q ss_pred EECCCCCC----c-----cHHHHHHHHhcCCCCcEEEEe
Q 044572 375 VVDPPRKG----L-----DSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 375 i~DPPR~G----l-----~~~v~~~l~~~~~~~~ivyvs 404 (457)
++|++... . ..++++.+.+.-.+++++.+.
T Consensus 156 i~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 194 (314)
T 1uir_A 156 IIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQ 194 (314)
T ss_dssp EEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEE
T ss_pred EECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEE
Confidence 99998532 1 356677776654567777665
No 143
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=98.95 E-value=5.7e-09 Score=104.41 Aligned_cols=110 Identities=13% Similarity=0.038 Sum_probs=78.5
Q ss_pred HHHHHHhhC--CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcc
Q 044572 288 LLRKLQKYV--PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPL 365 (457)
Q Consensus 288 l~~~i~~~~--~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~ 365 (457)
+.+.+.+.+ .++.+|||+|||+|.+++.+++. ++.+|+|||+++ +++.|++|++.+ +..++++++++|+.+...
T Consensus 52 ~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~-g~~~v~gvD~s~-~~~~a~~~~~~~--~~~~~i~~~~~d~~~~~~ 127 (340)
T 2fyt_A 52 YRDFIYQNPHIFKDKVVLDVGCGTGILSMFAAKA-GAKKVLGVDQSE-ILYQAMDIIRLN--KLEDTITLIKGKIEEVHL 127 (340)
T ss_dssp HHHHHHHCGGGTTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEESST-HHHHHHHHHHHT--TCTTTEEEEESCTTTSCC
T ss_pred HHHHHHhhhhhcCCCEEEEeeccCcHHHHHHHHc-CCCEEEEEChHH-HHHHHHHHHHHc--CCCCcEEEEEeeHHHhcC
Confidence 334444432 36889999999999999999985 567999999996 999999999874 334689999999987532
Q ss_pred cccCCccEEEECC-CCCC----ccHHHHHHHHhcCCCCcEEE
Q 044572 366 SWLVGSDVLVVDP-PRKG----LDSSLVHALQSIGSAERKAK 402 (457)
Q Consensus 366 ~~~~~~D~vi~DP-PR~G----l~~~v~~~l~~~~~~~~ivy 402 (457)
. .+.||+|+.++ +... ....+++.+.+.-.++++++
T Consensus 128 ~-~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 128 P-VEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp S-CSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred C-CCcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 1 25799999998 3322 22345555544333555554
No 144
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=98.95 E-value=1.8e-09 Score=99.37 Aligned_cols=86 Identities=12% Similarity=0.089 Sum_probs=68.9
Q ss_pred HHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccc
Q 044572 288 LLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSW 367 (457)
Q Consensus 288 l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~ 367 (457)
+.+.+.+++.++.+|||+|||+|.+++.++.. +..+|+|+|+++.+++.|++++.. ..+++++.+|+.+... .
T Consensus 32 ~~~~l~~~~~~~~~vLdiGcG~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~-----~~~i~~~~~d~~~~~~-~ 104 (215)
T 2pxx_A 32 FRALLEPELRPEDRILVLGCGNSALSYELFLG-GFPNVTSVDYSSVVVAAMQACYAH-----VPQLRWETMDVRKLDF-P 104 (215)
T ss_dssp HHHHHGGGCCTTCCEEEETCTTCSHHHHHHHT-TCCCEEEEESCHHHHHHHHHHTTT-----CTTCEEEECCTTSCCS-C
T ss_pred HHHHHHHhcCCCCeEEEECCCCcHHHHHHHHc-CCCcEEEEeCCHHHHHHHHHhccc-----CCCcEEEEcchhcCCC-C
Confidence 45556666677899999999999999999975 445899999999999999998753 2478999999977521 1
Q ss_pred cCCccEEEECCCC
Q 044572 368 LVGSDVLVVDPPR 380 (457)
Q Consensus 368 ~~~~D~vi~DPPR 380 (457)
.+.||+|+.+++-
T Consensus 105 ~~~fD~v~~~~~~ 117 (215)
T 2pxx_A 105 SASFDVVLEKGTL 117 (215)
T ss_dssp SSCEEEEEEESHH
T ss_pred CCcccEEEECcch
Confidence 3579999987763
No 145
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=98.95 E-value=1.1e-09 Score=102.33 Aligned_cols=112 Identities=16% Similarity=0.175 Sum_probs=79.8
Q ss_pred HHHHhhCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCC--CCCcEEEEEccCCcCcccc
Q 044572 290 RKLQKYVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKS--VDGNISWHNADNSIEPLSW 367 (457)
Q Consensus 290 ~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~--~~~nv~~~~~d~~~~~~~~ 367 (457)
..+...+.++.+|||+|||+|.+++.++.. + .+|+|+|+++.+++.|+++++..+.. ...+++++++|+.+....
T Consensus 22 ~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~- 98 (235)
T 3sm3_A 22 PIIHNYLQEDDEILDIGCGSGKISLELASK-G-YSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFH- 98 (235)
T ss_dssp TTHHHHCCTTCEEEEETCTTSHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSC-
T ss_pred HHHHHhCCCCCeEEEECCCCCHHHHHHHhC-C-CeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCC-
Confidence 344455667899999999999999999986 3 49999999999999999998763211 123789999999875321
Q ss_pred cCCccEEEECCCCCCcc--H---HHHHHHHhcCCCCcEEEEe
Q 044572 368 LVGSDVLVVDPPRKGLD--S---SLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 368 ~~~~D~vi~DPPR~Gl~--~---~v~~~l~~~~~~~~ivyvs 404 (457)
.+.||+|++...-.-+. . .+++.+.+.-.+++.++++
T Consensus 99 ~~~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (235)
T 3sm3_A 99 DSSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLV 140 (235)
T ss_dssp TTCEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 36799999976533221 1 3555555543466666664
No 146
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.95 E-value=1.6e-09 Score=101.55 Aligned_cols=118 Identities=12% Similarity=0.100 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCCC------CEEEEEeCCHHHHHHHHHHHhhCCC--CCCCcE
Q 044572 282 TRAFDILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARKC------RSVKCVEINKESQLSFEKTVSRLPK--SVDGNI 353 (457)
Q Consensus 282 ~~~~~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~------~~V~gVE~~~~av~~A~~Na~~~~~--~~~~nv 353 (457)
+.....+++.+...+.++.+|||+|||+|.++..++...+. .+|+++|+++++++.|++|++.++. ....++
T Consensus 68 p~~~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v 147 (227)
T 1r18_A 68 PHMHAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQL 147 (227)
T ss_dssp HHHHHHHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSE
T ss_pred hHHHHHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCce
Confidence 44555555555434457889999999999999999975432 4899999999999999999875210 003579
Q ss_pred EEEEccCCcCcccccCCccEEEECCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 354 SWHNADNSIEPLSWLVGSDVLVVDPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 354 ~~~~~d~~~~~~~~~~~~D~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
+++.+|+.+.+.. ...||+|+++.+...+..++. ..++ +++.++++
T Consensus 148 ~~~~~d~~~~~~~-~~~fD~I~~~~~~~~~~~~~~---~~Lk-pgG~lvi~ 193 (227)
T 1r18_A 148 LIVEGDGRKGYPP-NAPYNAIHVGAAAPDTPTELI---NQLA-SGGRLIVP 193 (227)
T ss_dssp EEEESCGGGCCGG-GCSEEEEEECSCBSSCCHHHH---HTEE-EEEEEEEE
T ss_pred EEEECCcccCCCc-CCCccEEEECCchHHHHHHHH---HHhc-CCCEEEEE
Confidence 9999998764322 257999999998665554333 2344 66777776
No 147
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.94 E-value=5.6e-09 Score=103.88 Aligned_cols=100 Identities=13% Similarity=0.039 Sum_probs=75.8
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEEC
Q 044572 298 YGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVVD 377 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~D 377 (457)
++.+|||+|||+|.+++.+|+. ++.+|+|||++ .+++.|+++++.+ +..++++++++|+.+.... .+.||+|+.+
T Consensus 38 ~~~~VLDiGcGtG~ls~~la~~-g~~~v~~vD~s-~~~~~a~~~~~~~--~~~~~i~~~~~d~~~~~~~-~~~~D~Ivs~ 112 (328)
T 1g6q_1 38 KDKIVLDVGCGTGILSMFAAKH-GAKHVIGVDMS-SIIEMAKELVELN--GFSDKITLLRGKLEDVHLP-FPKVDIIISE 112 (328)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-CCSEEEEEESS-THHHHHHHHHHHT--TCTTTEEEEESCTTTSCCS-SSCEEEEEEC
T ss_pred CCCEEEEecCccHHHHHHHHHC-CCCEEEEEChH-HHHHHHHHHHHHc--CCCCCEEEEECchhhccCC-CCcccEEEEe
Confidence 6889999999999999999974 66799999999 6999999999874 3446799999999875321 2579999999
Q ss_pred CCCCCc-----cHHHHHHHHhcCCCCcEEE
Q 044572 378 PPRKGL-----DSSLVHALQSIGSAERKAK 402 (457)
Q Consensus 378 PPR~Gl-----~~~v~~~l~~~~~~~~ivy 402 (457)
++-..+ -..++..+.++-.++++++
T Consensus 113 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 113 WMGYFLLYESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp CCBTTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred CchhhcccHHHHHHHHHHHHhhcCCCeEEE
Confidence 884433 2345555544333565554
No 148
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.94 E-value=1.4e-09 Score=107.17 Aligned_cols=108 Identities=14% Similarity=0.075 Sum_probs=78.5
Q ss_pred CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCC-CCcEEEEEccCCcCcccccCCccEEE
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSV-DGNISWHNADNSIEPLSWLVGSDVLV 375 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~-~~nv~~~~~d~~~~~~~~~~~~D~vi 375 (457)
..+.+|||+|||+|.+++.+++..+..+|++||+++++++.|++|+.....+. ..+++++.+|+.+.+....+.||+||
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii 173 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVII 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEE
Confidence 35789999999999999999976445799999999999999999975410011 36899999999775443346799999
Q ss_pred ECCCCCC------ccHHHHHHHHhcCCCCcEEEEe
Q 044572 376 VDPPRKG------LDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 376 ~DPPR~G------l~~~v~~~l~~~~~~~~ivyvs 404 (457)
+|+|... ...++++.+.+.-.+++++.+.
T Consensus 174 ~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 208 (304)
T 2o07_A 174 TDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQ 208 (304)
T ss_dssp EECC-----------CHHHHHHHHHEEEEEEEEEE
T ss_pred ECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEe
Confidence 9998521 1124566655544477777765
No 149
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=98.94 E-value=5.2e-09 Score=97.98 Aligned_cols=96 Identities=20% Similarity=0.052 Sum_probs=75.3
Q ss_pred CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEE
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVV 376 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~ 376 (457)
.++.+|||+|||+|.++..++... .+|+|||+++.+++.|++|+..+ . +++++++|+.+... ..+.||+|++
T Consensus 69 ~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~---~--~v~~~~~d~~~~~~-~~~~fD~v~~ 140 (231)
T 1vbf_A 69 HKGQKVLEIGTGIGYYTALIAEIV--DKVVSVEINEKMYNYASKLLSYY---N--NIKLILGDGTLGYE-EEKPYDRVVV 140 (231)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTC---S--SEEEEESCGGGCCG-GGCCEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHc--CEEEEEeCCHHHHHHHHHHHhhc---C--CeEEEECCcccccc-cCCCccEEEE
Confidence 468899999999999999999864 59999999999999999998762 2 79999999977332 2367999999
Q ss_pred CCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 377 DPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 377 DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
+.+...+..++ ...++ +++.++++
T Consensus 141 ~~~~~~~~~~~---~~~L~-pgG~l~~~ 164 (231)
T 1vbf_A 141 WATAPTLLCKP---YEQLK-EGGIMILP 164 (231)
T ss_dssp SSBBSSCCHHH---HHTEE-EEEEEEEE
T ss_pred CCcHHHHHHHH---HHHcC-CCcEEEEE
Confidence 98876665433 23444 56666665
No 150
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=98.93 E-value=1.7e-08 Score=97.71 Aligned_cols=112 Identities=10% Similarity=-0.065 Sum_probs=81.2
Q ss_pred HHHHHHHHHhhC--CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCc
Q 044572 285 FDILLRKLQKYV--PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSI 362 (457)
Q Consensus 285 ~~~l~~~i~~~~--~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~ 362 (457)
...+++.+.+.+ .++.+|||+|||+|.+++.++...++ +|+|||+|+.+++.|+++++.. +...+++++.+|+.+
T Consensus 49 ~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~--~~~~~~~~~~~d~~~ 125 (287)
T 1kpg_A 49 QIAKIDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANS--ENLRSKRVLLAGWEQ 125 (287)
T ss_dssp HHHHHHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTC--CCCSCEEEEESCGGG
T ss_pred HHHHHHHHHHHcCCCCcCEEEEECCcccHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhc--CCCCCeEEEECChhh
Confidence 344556666654 36889999999999999999954454 9999999999999999998863 334689999999865
Q ss_pred CcccccCCccEEEECCCC-----CCccHHHHHHHHhcCCCCcEEEEe
Q 044572 363 EPLSWLVGSDVLVVDPPR-----KGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 363 ~~~~~~~~~D~vi~DPPR-----~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
.. +.||+|++.-.- .. ...+++.+.+.-.+++.++++
T Consensus 126 ~~----~~fD~v~~~~~l~~~~~~~-~~~~l~~~~~~LkpgG~l~~~ 167 (287)
T 1kpg_A 126 FD----EPVDRIVSIGAFEHFGHER-YDAFFSLAHRLLPADGVMLLH 167 (287)
T ss_dssp CC----CCCSEEEEESCGGGTCTTT-HHHHHHHHHHHSCTTCEEEEE
T ss_pred CC----CCeeEEEEeCchhhcChHH-HHHHHHHHHHhcCCCCEEEEE
Confidence 42 679999876321 11 134566665544466666664
No 151
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=98.93 E-value=4.7e-09 Score=98.00 Aligned_cols=118 Identities=15% Similarity=0.131 Sum_probs=82.6
Q ss_pred HHHHHHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCCC-CEEEEEeCCHHHHHHHHHHHhhCCC--CCCCcEEEEEc
Q 044572 282 TRAFDILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARKC-RSVKCVEINKESQLSFEKTVSRLPK--SVDGNISWHNA 358 (457)
Q Consensus 282 ~~~~~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~-~~V~gVE~~~~av~~A~~Na~~~~~--~~~~nv~~~~~ 358 (457)
+.....+++.+...+.++.+|||+|||+|.++..++...+. .+|+++|+++.+++.|++|++.++. ....+++++.+
T Consensus 61 p~~~~~~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~ 140 (226)
T 1i1n_A 61 PHMHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVG 140 (226)
T ss_dssp HHHHHHHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEES
T ss_pred HHHHHHHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEEC
Confidence 44444555554433457899999999999999999976432 4999999999999999999876321 00357999999
Q ss_pred cCCcCcccccCCccEEEECCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 359 DNSIEPLSWLVGSDVLVVDPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 359 d~~~~~~~~~~~~D~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
|+...... ...||+|+++.+...+...+ ...++ +++.++++
T Consensus 141 d~~~~~~~-~~~fD~i~~~~~~~~~~~~~---~~~Lk-pgG~lv~~ 181 (226)
T 1i1n_A 141 DGRMGYAE-EAPYDAIHVGAAAPVVPQAL---IDQLK-PGGRLILP 181 (226)
T ss_dssp CGGGCCGG-GCCEEEEEECSBBSSCCHHH---HHTEE-EEEEEEEE
T ss_pred CcccCccc-CCCcCEEEECCchHHHHHHH---HHhcC-CCcEEEEE
Confidence 98754322 35799999999865544332 23454 55555554
No 152
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.93 E-value=4.6e-09 Score=103.48 Aligned_cols=129 Identities=14% Similarity=0.046 Sum_probs=87.3
Q ss_pred CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhC-CCCCCCcEEEEEccCCcCccc-ccCCccEE
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRL-PKSVDGNISWHNADNSIEPLS-WLVGSDVL 374 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~-~~~~~~nv~~~~~d~~~~~~~-~~~~~D~v 374 (457)
..+.+|||+|||+|.++..+++..+..+|++||+|+.+++.|++++... ......+++++.+|+.+.+.. ..+.||+|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 4678999999999999999997544579999999999999999987321 011236899999999776533 23579999
Q ss_pred EECCCCCC-----c-cHHHHHHHHhcCCCCcEEEEeccCCCCCchhchhhHHHHHHHh
Q 044572 375 VVDPPRKG-----L-DSSLVHALQSIGSAERKAKSLSESSSSMVKEEKRPWILRAKEA 426 (457)
Q Consensus 375 i~DPPR~G-----l-~~~v~~~l~~~~~~~~ivyvs~~~~~c~~~~~~~~~~~~~~~~ 426 (457)
++|++... + ..++++.+.+.-.+++++.+.+.+.. ......+.+...+++.
T Consensus 174 i~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~-~~~~~~~~~~~~l~~~ 230 (304)
T 3bwc_A 174 IIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIW-LDLELIEKMSRFIRET 230 (304)
T ss_dssp EEECC---------CCHHHHHHHHHHEEEEEEEEEEECCTT-TCHHHHHHHHHHHHHH
T ss_pred EECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCcc-cchHHHHHHHHHHHhC
Confidence 99997421 1 14566666654446777666522211 1122345666666665
No 153
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=98.93 E-value=2e-09 Score=105.69 Aligned_cols=109 Identities=17% Similarity=0.087 Sum_probs=80.5
Q ss_pred HHhhCCCCCeEEEEcccccHHHHHHH-hhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCC
Q 044572 292 LQKYVPYGASVTDLYAGAGVIGLSLA-AARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVG 370 (457)
Q Consensus 292 i~~~~~~~~~vLDl~cG~G~~sl~lA-~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~ 370 (457)
+...+.++.+|||+|||+|.+++.+| ......+|+|||+++.+++.|++|++.. +..++++++++|+.+.... +.
T Consensus 112 l~~~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~--~~ 187 (305)
T 3ocj_A 112 LQRHLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGH--ALAGQITLHRQDAWKLDTR--EG 187 (305)
T ss_dssp HHHHCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTS--TTGGGEEEEECCGGGCCCC--SC
T ss_pred HHhhCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhc--CCCCceEEEECchhcCCcc--CC
Confidence 33345678999999999999999986 2233469999999999999999999863 3335699999999876432 68
Q ss_pred ccEEEECCCCCCc-cH----HHHHHHHhcCCCCcEEEEe
Q 044572 371 SDVLVVDPPRKGL-DS----SLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 371 ~D~vi~DPPR~Gl-~~----~v~~~l~~~~~~~~ivyvs 404 (457)
||+|+++.+-.-+ +. .+++.+.+.-.+++.++++
T Consensus 188 fD~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 226 (305)
T 3ocj_A 188 YDLLTSNGLNIYEPDDARVTELYRRFWQALKPGGALVTS 226 (305)
T ss_dssp EEEEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEEECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 9999998764322 12 2455555544477777776
No 154
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=98.92 E-value=6e-09 Score=94.68 Aligned_cols=99 Identities=19% Similarity=0.024 Sum_probs=74.1
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEEC
Q 044572 298 YGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVVD 377 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~D 377 (457)
++.+|||+|||+|.++..++.. + .+|+|+|+++.+++.|+++++.. ...+++++++|+.+... .+.||+|++.
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~-~-~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~~~d~~~~~~--~~~~D~v~~~ 104 (199)
T 2xvm_A 32 KPGKTLDLGCGNGRNSLYLAAN-G-YDVDAWDKNAMSIANVERIKSIE---NLDNLHTRVVDLNNLTF--DRQYDFILST 104 (199)
T ss_dssp CSCEEEEETCTTSHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHHHH---TCTTEEEEECCGGGCCC--CCCEEEEEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHHC-C-CeEEEEECCHHHHHHHHHHHHhC---CCCCcEEEEcchhhCCC--CCCceEEEEc
Confidence 5789999999999999999986 3 49999999999999999998763 23579999999987543 4679999987
Q ss_pred CCCCCc----cHHHHHHHHhcCCCCcEEEE
Q 044572 378 PPRKGL----DSSLVHALQSIGSAERKAKS 403 (457)
Q Consensus 378 PPR~Gl----~~~v~~~l~~~~~~~~ivyv 403 (457)
..-.-+ ...+++.+.+.-.+++.+++
T Consensus 105 ~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~ 134 (199)
T 2xvm_A 105 VVLMFLEAKTIPGLIANMQRCTKPGGYNLI 134 (199)
T ss_dssp SCGGGSCGGGHHHHHHHHHHTEEEEEEEEE
T ss_pred chhhhCCHHHHHHHHHHHHHhcCCCeEEEE
Confidence 653222 13455555554345555444
No 155
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.92 E-value=3.2e-09 Score=111.05 Aligned_cols=115 Identities=12% Similarity=0.094 Sum_probs=82.8
Q ss_pred HHHHHHHHHHhhCC--CCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCC
Q 044572 284 AFDILLRKLQKYVP--YGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNS 361 (457)
Q Consensus 284 ~~~~l~~~i~~~~~--~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~ 361 (457)
.++.+.+.+.+.+. ++.+|||+|||+|.+++.+|+ .++.+|+|||+++ +++.|++|++.+ +..++++++.+|+.
T Consensus 142 ~t~~~~~~il~~l~~~~~~~VLDiGcGtG~la~~la~-~~~~~V~gvD~s~-~l~~A~~~~~~~--gl~~~v~~~~~d~~ 217 (480)
T 3b3j_A 142 RTGTYQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQ-AGARKIYAVEAST-MAQHAEVLVKSN--NLTDRIVVIPGKVE 217 (480)
T ss_dssp HHHHHHHHHHHTGGGTTTCEEEEESCSTTHHHHHHHH-TTCSEEEEEECHH-HHHHHHHHHHHT--TCTTTEEEEESCTT
T ss_pred hHHHHHHHHHHhhhhcCCCEEEEecCcccHHHHHHHH-cCCCEEEEEEcHH-HHHHHHHHHHHc--CCCCcEEEEECchh
Confidence 45556666665442 578999999999999999997 4567999999998 999999999884 33468999999998
Q ss_pred cCcccccCCccEEEECCC-CCCccHHHHHHH---HhcCCCCcEEEEe
Q 044572 362 IEPLSWLVGSDVLVVDPP-RKGLDSSLVHAL---QSIGSAERKAKSL 404 (457)
Q Consensus 362 ~~~~~~~~~~D~vi~DPP-R~Gl~~~v~~~l---~~~~~~~~ivyvs 404 (457)
+.. ..++||+||.+++ .........+.+ .++-.++++++++
T Consensus 218 ~~~--~~~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 218 EVS--LPEQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp TCC--CSSCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEESC
T ss_pred hCc--cCCCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEEE
Confidence 742 2357999999998 222223333333 2322366666653
No 156
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=98.92 E-value=1.6e-08 Score=96.96 Aligned_cols=119 Identities=15% Similarity=0.152 Sum_probs=86.3
Q ss_pred HHHHHHHHHHHHhhCC--CCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEcc
Q 044572 282 TRAFDILLRKLQKYVP--YGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNAD 359 (457)
Q Consensus 282 ~~~~~~l~~~i~~~~~--~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d 359 (457)
......+.+.+.+.+. ++.+|||+|||+|.+++.+++..+ .+|+|+|+|+.+++.|+++++.. +..++++++.+|
T Consensus 43 ~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~gvD~s~~~~~~a~~~~~~~--~~~~~~~~~~~d 119 (273)
T 3bus_A 43 DDATDRLTDEMIALLDVRSGDRVLDVGCGIGKPAVRLATARD-VRVTGISISRPQVNQANARATAA--GLANRVTFSYAD 119 (273)
T ss_dssp HHHHHHHHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHSC-CEEEEEESCHHHHHHHHHHHHHT--TCTTTEEEEECC
T ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcC-CEEEEEeCCHHHHHHHHHHHHhc--CCCcceEEEECc
Confidence 3445566666666553 688999999999999999997543 59999999999999999998873 334579999999
Q ss_pred CCcCcccccCCccEEEECCCCCCc--cHHHHHHHHhcCCCCcEEEEe
Q 044572 360 NSIEPLSWLVGSDVLVVDPPRKGL--DSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 360 ~~~~~~~~~~~~D~vi~DPPR~Gl--~~~v~~~l~~~~~~~~ivyvs 404 (457)
+.+.... .+.||+|++.-.-.-+ ...+++.+.+.-.+++.++++
T Consensus 120 ~~~~~~~-~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 165 (273)
T 3bus_A 120 AMDLPFE-DASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIA 165 (273)
T ss_dssp TTSCCSC-TTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEE
T ss_pred cccCCCC-CCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEE
Confidence 9875321 3579999875542222 235666666654466666664
No 157
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=98.92 E-value=6.2e-09 Score=95.82 Aligned_cols=114 Identities=14% Similarity=0.106 Sum_probs=80.9
Q ss_pred HHHHHHHhhCC-CCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcc
Q 044572 287 ILLRKLQKYVP-YGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPL 365 (457)
Q Consensus 287 ~l~~~i~~~~~-~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~ 365 (457)
.+.+.+.+.+. ...+|||+|||+|.++..++.. ...+|+|+|+++.+++.|+++++.. +...+++++++|+.+...
T Consensus 31 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~--~~~~~~~~~~~d~~~~~~ 107 (219)
T 3dlc_A 31 IIAENIINRFGITAGTCIDIGSGPGALSIALAKQ-SDFSIRALDFSKHMNEIALKNIADA--NLNDRIQIVQGDVHNIPI 107 (219)
T ss_dssp HHHHHHHHHHCCCEEEEEEETCTTSHHHHHHHHH-SEEEEEEEESCHHHHHHHHHHHHHT--TCTTTEEEEECBTTBCSS
T ss_pred HHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHhc--cccCceEEEEcCHHHCCC
Confidence 34444444332 2339999999999999999986 3358999999999999999999874 334589999999987532
Q ss_pred cccCCccEEEECCCCCC--ccHHHHHHHHhcCCCCcEEEEe
Q 044572 366 SWLVGSDVLVVDPPRKG--LDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 366 ~~~~~~D~vi~DPPR~G--l~~~v~~~l~~~~~~~~ivyvs 404 (457)
..+.||+|+++..-.- -...+++.+.+.-.+++.++++
T Consensus 108 -~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~ 147 (219)
T 3dlc_A 108 -EDNYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIG 147 (219)
T ss_dssp -CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred -CcccccEEEECchHhhccCHHHHHHHHHHhCCCCCEEEEE
Confidence 1357999999765211 1134566665544467777765
No 158
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.91 E-value=6e-09 Score=101.54 Aligned_cols=108 Identities=14% Similarity=0.060 Sum_probs=80.7
Q ss_pred CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCC-CCCcEEEEEccCCcCcccccCCccEEE
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKS-VDGNISWHNADNSIEPLSWLVGSDVLV 375 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~-~~~nv~~~~~d~~~~~~~~~~~~D~vi 375 (457)
..+.+|||+|||+|.++..+++..+..+|++||+++.+++.|++++..++.. ...+++++.+|+.+.+....+.||+|+
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 156 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEE
Confidence 3578999999999999999997644579999999999999999997642101 136899999999775443346799999
Q ss_pred ECCCCC-----Cc-cHHHHHHHHhcCCCCcEEEEe
Q 044572 376 VDPPRK-----GL-DSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 376 ~DPPR~-----Gl-~~~v~~~l~~~~~~~~ivyvs 404 (457)
+|++-. .+ ..++++.+.+.-.+++++.+.
T Consensus 157 ~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~ 191 (283)
T 2i7c_A 157 VDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQ 191 (283)
T ss_dssp EECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEE
T ss_pred EcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 998632 11 146677666654467777665
No 159
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=98.91 E-value=5.4e-09 Score=96.56 Aligned_cols=106 Identities=12% Similarity=-0.025 Sum_probs=71.8
Q ss_pred CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCC---------CCCCcEEEEEccCCcCcccc
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPK---------SVDGNISWHNADNSIEPLSW 367 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~---------~~~~nv~~~~~d~~~~~~~~ 367 (457)
.++.+|||+|||+|.++..+|+. + .+|+|||+|+.|++.|+++++.... ....+++|+++|+.+.....
T Consensus 21 ~~~~~vLD~GCG~G~~~~~la~~-g-~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~ 98 (203)
T 1pjz_A 21 VPGARVLVPLCGKSQDMSWLSGQ-G-YHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARD 98 (203)
T ss_dssp CTTCEEEETTTCCSHHHHHHHHH-C-CEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHH
T ss_pred CCCCEEEEeCCCCcHhHHHHHHC-C-CeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCccc
Confidence 46889999999999999999986 3 3899999999999999987643100 01257899999998864321
Q ss_pred cCCccEEEECCCCCCcc----HHHHHHHHhcCCCCcE-EEEe
Q 044572 368 LVGSDVLVVDPPRKGLD----SSLVHALQSIGSAERK-AKSL 404 (457)
Q Consensus 368 ~~~~D~vi~DPPR~Gl~----~~v~~~l~~~~~~~~i-vyvs 404 (457)
.+.||+|+..---.-++ ..+++.+.+.-++++. ++++
T Consensus 99 ~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~ 140 (203)
T 1pjz_A 99 IGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLIT 140 (203)
T ss_dssp HHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEE
T ss_pred CCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 25799998532111111 1345555554445654 4443
No 160
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=98.91 E-value=1.1e-08 Score=99.91 Aligned_cols=117 Identities=9% Similarity=0.004 Sum_probs=82.8
Q ss_pred HHHHHHHHhhC-CCCCeEEEEcccccHHHHHHHhhC-CCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcC
Q 044572 286 DILLRKLQKYV-PYGASVTDLYAGAGVIGLSLAAAR-KCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIE 363 (457)
Q Consensus 286 ~~l~~~i~~~~-~~~~~vLDl~cG~G~~sl~lA~~~-~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~ 363 (457)
+.+++.+..+. .++.+|||+|||+|.++..++... ...+|+|||+|+.+++.|+++++... +...+++|+++|+.+.
T Consensus 23 ~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~~v~~~~~d~~~~ 101 (299)
T 3g5t_A 23 SDFYKMIDEYHDGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSP-DTYKNVSFKISSSDDF 101 (299)
T ss_dssp HHHHHHHHHHCCSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC--CCTTEEEEECCTTCC
T ss_pred HHHHHHHHHHhcCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhcc-CCCCceEEEEcCHHhC
Confidence 34556666654 368899999999999999999643 46799999999999999999988741 2346899999999875
Q ss_pred cccc-----cCCccEEEECCCCCC-ccHHHHHHHHhcCCCCcEEEE
Q 044572 364 PLSW-----LVGSDVLVVDPPRKG-LDSSLVHALQSIGSAERKAKS 403 (457)
Q Consensus 364 ~~~~-----~~~~D~vi~DPPR~G-l~~~v~~~l~~~~~~~~ivyv 403 (457)
.... .+.||+|++.-.-.- -...+++.+.+...+++.+++
T Consensus 102 ~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 102 KFLGADSVDKQKIDMITAVECAHWFDFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp GGGCTTTTTSSCEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEE
T ss_pred CccccccccCCCeeEEeHhhHHHHhCHHHHHHHHHHhcCCCcEEEE
Confidence 4321 157999998654111 112455555554345666555
No 161
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.91 E-value=7.1e-09 Score=100.45 Aligned_cols=99 Identities=19% Similarity=0.069 Sum_probs=75.2
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEEC
Q 044572 298 YGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVVD 377 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~D 377 (457)
++.+|||+|||+|.+++.++.. + .+|+|||+|+.+++.|+++++.+ +. +++++++|+.+... .+.||+|+++
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~-g-~~v~~vD~s~~~~~~a~~~~~~~---~~-~~~~~~~d~~~~~~--~~~fD~i~~~ 191 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLL-G-YDVTSWDHNENSIAFLNETKEKE---NL-NISTALYDINAANI--QENYDFIVST 191 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHHHT---TC-CEEEEECCGGGCCC--CSCEEEEEEC
T ss_pred CCCcEEEECCCCCHHHHHHHHC-C-CeEEEEECCHHHHHHHHHHHHHc---CC-ceEEEEeccccccc--cCCccEEEEc
Confidence 6889999999999999999986 3 39999999999999999999873 22 89999999987543 4679999998
Q ss_pred CCCCCc----cHHHHHHHHhcCCCCcEEEEe
Q 044572 378 PPRKGL----DSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 378 PPR~Gl----~~~v~~~l~~~~~~~~ivyvs 404 (457)
..-.-+ -..+++.+.+.-.+++.+++.
T Consensus 192 ~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 222 (286)
T 3m70_A 192 VVFMFLNRERVPSIIKNMKEHTNVGGYNLIV 222 (286)
T ss_dssp SSGGGSCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred cchhhCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 753211 124566565544456654443
No 162
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=98.91 E-value=6.7e-09 Score=102.23 Aligned_cols=123 Identities=9% Similarity=-0.033 Sum_probs=84.7
Q ss_pred CCCCCCHHHHHHHHHHHHhhCC---CCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCc
Q 044572 276 SFGQANTRAFDILLRKLQKYVP---YGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGN 352 (457)
Q Consensus 276 ~FfQ~n~~~~~~l~~~i~~~~~---~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~n 352 (457)
.|.|.+ ...+...+.+.+.+. ++.+|||+|||+|.+++.+++..+ .+|+|||+++.+++.|++|++.+ +..++
T Consensus 93 ~f~~~~-~~~~~~~~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~--~~~~~ 168 (312)
T 3vc1_A 93 VIAELH-RLESAQAEFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRFG-SRVEGVTLSAAQADFGNRRAREL--RIDDH 168 (312)
T ss_dssp HHHHHH-HHHHHHHHHHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHHT--TCTTT
T ss_pred HHhhhh-hHHHHHHHHHHHHhccCCCCCEEEEecCCCCHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHHc--CCCCc
Confidence 444433 334444566666553 678999999999999999998633 48999999999999999999874 33458
Q ss_pred EEEEEccCCcCcccccCCccEEEECCC--CCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 353 ISWHNADNSIEPLSWLVGSDVLVVDPP--RKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 353 v~~~~~d~~~~~~~~~~~~D~vi~DPP--R~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
++++++|+.+... ..+.||+|+..-- ..+ ...+++.+.+.-.+++.+++.
T Consensus 169 v~~~~~d~~~~~~-~~~~fD~V~~~~~l~~~~-~~~~l~~~~~~LkpgG~l~~~ 220 (312)
T 3vc1_A 169 VRSRVCNMLDTPF-DKGAVTASWNNESTMYVD-LHDLFSEHSRFLKVGGRYVTI 220 (312)
T ss_dssp EEEEECCTTSCCC-CTTCEEEEEEESCGGGSC-HHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEECChhcCCC-CCCCEeEEEECCchhhCC-HHHHHHHHHHHcCCCcEEEEE
Confidence 9999999987532 1367999987432 112 234555555543355555443
No 163
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=98.90 E-value=1.2e-08 Score=98.86 Aligned_cols=103 Identities=12% Similarity=0.068 Sum_probs=77.1
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEEC
Q 044572 298 YGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVVD 377 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~D 377 (457)
.+.+|||+|||+|.++..++.. ..+|+|||+++.+++.|+++++.. +...+++++++|+.+......+.||+|++.
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~ 143 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAER--GHQVILCDLSAQMIDRAKQAAEAK--GVSDNMQFIHCAAQDVASHLETPVDLILFH 143 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHC---CCGGGEEEEESCGGGTGGGCSSCEEEEEEE
T ss_pred CCCEEEEeCCcchHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhc--CCCcceEEEEcCHHHhhhhcCCCceEEEEC
Confidence 5679999999999999999986 349999999999999999998863 233689999999987653234689999986
Q ss_pred CCCCC--ccHHHHHHHHhcCCCCcEEEEe
Q 044572 378 PPRKG--LDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 378 PPR~G--l~~~v~~~l~~~~~~~~ivyvs 404 (457)
-.-.- -...+++.+.++-.+++.++++
T Consensus 144 ~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 172 (285)
T 4htf_A 144 AVLEWVADPRSVLQTLWSVLRPGGVLSLM 172 (285)
T ss_dssp SCGGGCSCHHHHHHHHHHTEEEEEEEEEE
T ss_pred chhhcccCHHHHHHHHHHHcCCCeEEEEE
Confidence 43211 1134666666654567777665
No 164
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=98.89 E-value=1.2e-08 Score=94.47 Aligned_cols=113 Identities=16% Similarity=0.108 Sum_probs=80.9
Q ss_pred HHHHHHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCCC-CEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccC
Q 044572 282 TRAFDILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARKC-RSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADN 360 (457)
Q Consensus 282 ~~~~~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~-~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~ 360 (457)
......+++.+ . +.++.+|||+|||+|.++..++...+. .+|+++|+++.+++.|+++++.+ +..+++++.+|+
T Consensus 63 ~~~~~~~~~~~-~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~---~~~~v~~~~~d~ 137 (215)
T 2yxe_A 63 IHMVGMMCELL-D-LKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKL---GYDNVIVIVGDG 137 (215)
T ss_dssp HHHHHHHHHHT-T-CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHH---TCTTEEEEESCG
T ss_pred HHHHHHHHHhh-C-CCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHc---CCCCeEEEECCc
Confidence 44444444432 1 246889999999999999999986522 59999999999999999998763 235799999998
Q ss_pred CcCcccccCCccEEEECCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 361 SIEPLSWLVGSDVLVVDPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 361 ~~~~~~~~~~~D~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
...... ...||+|+++.+...+..++ ...++ +++.++++
T Consensus 138 ~~~~~~-~~~fD~v~~~~~~~~~~~~~---~~~L~-pgG~lv~~ 176 (215)
T 2yxe_A 138 TLGYEP-LAPYDRIYTTAAGPKIPEPL---IRQLK-DGGKLLMP 176 (215)
T ss_dssp GGCCGG-GCCEEEEEESSBBSSCCHHH---HHTEE-EEEEEEEE
T ss_pred ccCCCC-CCCeeEEEECCchHHHHHHH---HHHcC-CCcEEEEE
Confidence 654321 35799999998865555432 33444 56666665
No 165
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.89 E-value=8e-09 Score=97.04 Aligned_cols=110 Identities=15% Similarity=0.056 Sum_probs=79.7
Q ss_pred HHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcc
Q 044572 286 DILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPL 365 (457)
Q Consensus 286 ~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~ 365 (457)
..+.+.+.+.+.++.+|||+|||+|.++..++.. .+|+|+|+++.+++.|++++..++ .+++++++|+.+...
T Consensus 21 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~---~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~d~~~~~~ 93 (243)
T 3d2l_A 21 PEWVAWVLEQVEPGKRIADIGCGTGTATLLLADH---YEVTGVDLSEEMLEIAQEKAMETN----RHVDFWVQDMRELEL 93 (243)
T ss_dssp HHHHHHHHHHSCTTCEEEEESCTTCHHHHHHTTT---SEEEEEESCHHHHHHHHHHHHHTT----CCCEEEECCGGGCCC
T ss_pred HHHHHHHHHHcCCCCeEEEecCCCCHHHHHHhhC---CeEEEEECCHHHHHHHHHhhhhcC----CceEEEEcChhhcCC
Confidence 3455666666777899999999999999999974 599999999999999999987632 468999999877532
Q ss_pred cccCCccEEEECC-CCCCc-----cHHHHHHHHhcCCCCcEEEEe
Q 044572 366 SWLVGSDVLVVDP-PRKGL-----DSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 366 ~~~~~~D~vi~DP-PR~Gl-----~~~v~~~l~~~~~~~~ivyvs 404 (457)
.+.||+|++.. .-.-+ ...+++.+.++-.+++.++++
T Consensus 94 --~~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 94 --PEPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp --SSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred --CCCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 26799999865 21111 113444444433466666664
No 166
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=98.87 E-value=2.9e-08 Score=97.64 Aligned_cols=112 Identities=10% Similarity=-0.006 Sum_probs=80.6
Q ss_pred HHHHHHHHhhCC--CCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcC
Q 044572 286 DILLRKLQKYVP--YGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIE 363 (457)
Q Consensus 286 ~~l~~~i~~~~~--~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~ 363 (457)
..+++.+.+.+. ++.+|||+|||+|.+++.+++..++ +|+|||+|+.+++.|+++++.. +..++++++.+|+.+.
T Consensus 76 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~ 152 (318)
T 2fk8_A 76 YAKVDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASI--DTNRSRQVLLQGWEDF 152 (318)
T ss_dssp HHHHHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTS--CCSSCEEEEESCGGGC
T ss_pred HHHHHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhc--CCCCceEEEECChHHC
Confidence 445566666543 6889999999999999999976343 9999999999999999998863 3345799999998664
Q ss_pred cccccCCccEEEECCCCCCc----cHHHHHHHHhcCCCCcEEEEe
Q 044572 364 PLSWLVGSDVLVVDPPRKGL----DSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 364 ~~~~~~~~D~vi~DPPR~Gl----~~~v~~~l~~~~~~~~ivyvs 404 (457)
. +.||+|+..-.-.-+ ...+++.+.+.-.+++.+++.
T Consensus 153 ~----~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 193 (318)
T 2fk8_A 153 A----EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQ 193 (318)
T ss_dssp C----CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEE
T ss_pred C----CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 2 679999976431111 134566555544466666654
No 167
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.87 E-value=5.1e-09 Score=98.87 Aligned_cols=117 Identities=13% Similarity=0.018 Sum_probs=80.2
Q ss_pred HHHHHHHHHHHhhCC---CCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEcc
Q 044572 283 RAFDILLRKLQKYVP---YGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNAD 359 (457)
Q Consensus 283 ~~~~~l~~~i~~~~~---~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d 359 (457)
...+.+++.+...+. ++.+|||+|||+|.++..++... ..+|+|||+++.+++.|++++... ...+++++.+|
T Consensus 61 ~~~~~~~~~l~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~~~d 136 (241)
T 2ex4_A 61 NSSRKFLQRFLREGPNKTGTSCALDCGAGIGRITKRLLLPL-FREVDMVDITEDFLVQAKTYLGEE---GKRVRNYFCCG 136 (241)
T ss_dssp HHHHHHHHGGGC----CCCCSEEEEETCTTTHHHHHTTTTT-CSEEEEEESCHHHHHHHHHHTGGG---GGGEEEEEECC
T ss_pred HhHHHHHHHHHHhcccCCCCCEEEEECCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHhhhc---CCceEEEEEcC
Confidence 344555555554432 47899999999999999988753 569999999999999999998763 13578999999
Q ss_pred CCcCcccccCCccEEEECCCCCCccH----HHHHHHHhcCCCCcEEEEe
Q 044572 360 NSIEPLSWLVGSDVLVVDPPRKGLDS----SLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 360 ~~~~~~~~~~~~D~vi~DPPR~Gl~~----~v~~~l~~~~~~~~ivyvs 404 (457)
+.+.... .+.||+|+++-.-.-+.. .+++.+.+...+++.++++
T Consensus 137 ~~~~~~~-~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 184 (241)
T 2ex4_A 137 LQDFTPE-PDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIK 184 (241)
T ss_dssp GGGCCCC-SSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhhcCCC-CCCEEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 8765422 347999998743222222 3455555543466666664
No 168
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.87 E-value=4.3e-09 Score=102.40 Aligned_cols=103 Identities=14% Similarity=0.160 Sum_probs=73.8
Q ss_pred CCCCHHHHHHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCCCCE----EEEEeCCHHHHHHHHHHHhhCCCCCCCcE
Q 044572 278 GQANTRAFDILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARKCRS----VKCVEINKESQLSFEKTVSRLPKSVDGNI 353 (457)
Q Consensus 278 fQ~n~~~~~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~----V~gVE~~~~av~~A~~Na~~~~~~~~~nv 353 (457)
|..+....+.+++.+. +.++.+|||+|||+|.++..++.... + |+|||+|+++++.+++|. . .++
T Consensus 24 fL~d~~i~~~iv~~~~--~~~~~~VLEIG~G~G~lt~~La~~~~--~~~~~V~avDid~~~l~~a~~~~-~------~~v 92 (279)
T 3uzu_A 24 FLVDHGVIDAIVAAIR--PERGERMVEIGPGLGALTGPVIARLA--TPGSPLHAVELDRDLIGRLEQRF-G------ELL 92 (279)
T ss_dssp EECCHHHHHHHHHHHC--CCTTCEEEEECCTTSTTHHHHHHHHC--BTTBCEEEEECCHHHHHHHHHHH-G------GGE
T ss_pred ccCCHHHHHHHHHhcC--CCCcCEEEEEccccHHHHHHHHHhCC--CcCCeEEEEECCHHHHHHHHHhc-C------CCc
Confidence 3345555555555432 23688999999999999999998643 5 999999999999999984 2 478
Q ss_pred EEEEccCCcCccc-ccC----CccEEEECCCCCCccHHHHHHH
Q 044572 354 SWHNADNSIEPLS-WLV----GSDVLVVDPPRKGLDSSLVHAL 391 (457)
Q Consensus 354 ~~~~~d~~~~~~~-~~~----~~D~vi~DPPR~Gl~~~v~~~l 391 (457)
+++++|+.+.... ... ..+.||.|+|+.--.+-+.+.+
T Consensus 93 ~~i~~D~~~~~~~~~~~~~~~~~~~vv~NlPY~iss~il~~ll 135 (279)
T 3uzu_A 93 ELHAGDALTFDFGSIARPGDEPSLRIIGNLPYNISSPLLFHLM 135 (279)
T ss_dssp EEEESCGGGCCGGGGSCSSSSCCEEEEEECCHHHHHHHHHHHG
T ss_pred EEEECChhcCChhHhcccccCCceEEEEccCccccHHHHHHHH
Confidence 9999999876432 111 3468999999854443333333
No 169
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=98.87 E-value=1.4e-08 Score=96.92 Aligned_cols=102 Identities=10% Similarity=0.094 Sum_probs=73.8
Q ss_pred CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEE
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVV 376 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~ 376 (457)
.++.+|||+|||+|.++..++... .+|+|+|+|+.+++.|+++++.. +..+++++.+|+.+.... .+.||+|+.
T Consensus 36 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~l~~a~~~~~~~---~~~~v~~~~~d~~~l~~~-~~~fD~V~~ 109 (260)
T 1vl5_A 36 KGNEEVLDVATGGGHVANAFAPFV--KKVVAFDLTEDILKVARAFIEGN---GHQQVEYVQGDAEQMPFT-DERFHIVTC 109 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHHHT---TCCSEEEEECCC-CCCSC-TTCEEEEEE
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHhc---CCCceEEEEecHHhCCCC-CCCEEEEEE
Confidence 368899999999999999999864 39999999999999999998773 345899999999875321 357999988
Q ss_pred CCCCCCc--cHHHHHHHHhcCCCCcEEEEe
Q 044572 377 DPPRKGL--DSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 377 DPPR~Gl--~~~v~~~l~~~~~~~~ivyvs 404 (457)
.-.-.-+ ...+++.+.+.-.+++.++++
T Consensus 110 ~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~ 139 (260)
T 1vl5_A 110 RIAAHHFPNPASFVSEAYRVLKKGGQLLLV 139 (260)
T ss_dssp ESCGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhhhHhcCCHHHHHHHHHHHcCCCCEEEEE
Confidence 5321100 124555555543466666653
No 170
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=98.87 E-value=1.6e-08 Score=93.74 Aligned_cols=106 Identities=15% Similarity=0.112 Sum_probs=77.5
Q ss_pred HHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcc
Q 044572 286 DILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPL 365 (457)
Q Consensus 286 ~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~ 365 (457)
+.+++.+.. .++.+|||+|||+|.++..++.. ..+|+|+|+++.+++.|++++. .+++++++|+.+...
T Consensus 35 ~~~l~~~~~--~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~-------~~~~~~~~d~~~~~~ 103 (220)
T 3hnr_A 35 EDILEDVVN--KSFGNVLEFGVGTGNLTNKLLLA--GRTVYGIEPSREMRMIAKEKLP-------KEFSITEGDFLSFEV 103 (220)
T ss_dssp HHHHHHHHH--TCCSEEEEECCTTSHHHHHHHHT--TCEEEEECSCHHHHHHHHHHSC-------TTCCEESCCSSSCCC
T ss_pred HHHHHHhhc--cCCCeEEEeCCCCCHHHHHHHhC--CCeEEEEeCCHHHHHHHHHhCC-------CceEEEeCChhhcCC
Confidence 344444433 26789999999999999999986 3499999999999999998754 367899999987643
Q ss_pred cccCCccEEEECCCCCCccH----HHHHHHHhcCCCCcEEEEe
Q 044572 366 SWLVGSDVLVVDPPRKGLDS----SLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 366 ~~~~~~D~vi~DPPR~Gl~~----~v~~~l~~~~~~~~ivyvs 404 (457)
. +.||+|++.-.-.-+.. .+++.+.+.-.+++.++++
T Consensus 104 ~--~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 144 (220)
T 3hnr_A 104 P--TSIDTIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFA 144 (220)
T ss_dssp C--SCCSEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred C--CCeEEEEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEE
Confidence 3 68999999754322222 1566665554567777775
No 171
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=98.87 E-value=1.9e-08 Score=94.97 Aligned_cols=102 Identities=14% Similarity=0.057 Sum_probs=74.7
Q ss_pred CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEE
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVV 376 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~ 376 (457)
.++.+|||+|||+|.++..++... .+|+|+|+++.+++.|+++++.. +..+++++.+|+.+... ..+.||+|++
T Consensus 20 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~---~~~~v~~~~~d~~~~~~-~~~~fD~v~~ 93 (239)
T 1xxl_A 20 RAEHRVLDIGAGAGHTALAFSPYV--QECIGVDATKEMVEVASSFAQEK---GVENVRFQQGTAESLPF-PDDSFDIITC 93 (239)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHHHH---TCCSEEEEECBTTBCCS-CTTCEEEEEE
T ss_pred CCCCEEEEEccCcCHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHHHc---CCCCeEEEecccccCCC-CCCcEEEEEE
Confidence 478999999999999999999864 49999999999999999998763 33589999999977432 1357999998
Q ss_pred CCCCCC--ccHHHHHHHHhcCCCCcEEEEe
Q 044572 377 DPPRKG--LDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 377 DPPR~G--l~~~v~~~l~~~~~~~~ivyvs 404 (457)
.-.-.- -...+++.+.+.-.+++.+++.
T Consensus 94 ~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 123 (239)
T 1xxl_A 94 RYAAHHFSDVRKAVREVARVLKQDGRFLLV 123 (239)
T ss_dssp ESCGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCchhhccCHHHHHHHHHHHcCCCcEEEEE
Confidence 643111 1134555555543466666554
No 172
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=98.86 E-value=3.1e-09 Score=100.09 Aligned_cols=104 Identities=14% Similarity=0.056 Sum_probs=74.5
Q ss_pred CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCC-HHHHHHH---HHHHhhCCCCCCCcEEEEEccCCcCcccccCCcc
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEIN-KESQLSF---EKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSD 372 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~-~~av~~A---~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D 372 (457)
.++.+|||+|||+|.+++.+|+.....+|+|||+| +.+++.| +++++. .+..|++|+++|+.+........+|
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~---~~~~~v~~~~~d~~~l~~~~~d~v~ 99 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSK---GGLSNVVFVIAAAESLPFELKNIAD 99 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGG---TCCSSEEEECCBTTBCCGGGTTCEE
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHH---cCCCCeEEEEcCHHHhhhhccCeEE
Confidence 46889999999999999999965445689999999 6666665 777765 2346899999999886433335678
Q ss_pred EEEECCCCCCc-------cHHHHHHHHhcCCCCcEEEE
Q 044572 373 VLVVDPPRKGL-------DSSLVHALQSIGSAERKAKS 403 (457)
Q Consensus 373 ~vi~DPPR~Gl-------~~~v~~~l~~~~~~~~ivyv 403 (457)
.|.+++|..-. ...+++.+.+.-.+++.+++
T Consensus 100 ~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 100 SISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp EEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred EEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 88888874211 12456666655446666665
No 173
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=98.86 E-value=7e-09 Score=99.75 Aligned_cols=106 Identities=16% Similarity=0.152 Sum_probs=73.6
Q ss_pred HHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCccc
Q 044572 287 ILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLS 366 (457)
Q Consensus 287 ~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~ 366 (457)
.+++.+.++...+.+|||+|||+|.++..++.. ..+|+|||+|+.|++.|++ ..+++++++|+++....
T Consensus 28 ~l~~~l~~~~~~~~~vLDvGcGtG~~~~~l~~~--~~~v~gvD~s~~ml~~a~~---------~~~v~~~~~~~e~~~~~ 96 (257)
T 4hg2_A 28 ALFRWLGEVAPARGDALDCGCGSGQASLGLAEF--FERVHAVDPGEAQIRQALR---------HPRVTYAVAPAEDTGLP 96 (257)
T ss_dssp HHHHHHHHHSSCSSEEEEESCTTTTTHHHHHTT--CSEEEEEESCHHHHHTCCC---------CTTEEEEECCTTCCCCC
T ss_pred HHHHHHHHhcCCCCCEEEEcCCCCHHHHHHHHh--CCEEEEEeCcHHhhhhhhh---------cCCceeehhhhhhhccc
Confidence 456777777766789999999999999999975 3599999999999976542 24799999999875432
Q ss_pred ccCCccEEEECCCCCCc-cHHHHHHHHhcCCCCcEEEEe
Q 044572 367 WLVGSDVLVVDPPRKGL-DSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 367 ~~~~~D~vi~DPPR~Gl-~~~v~~~l~~~~~~~~ivyvs 404 (457)
.+.||+|++.=--.-. ...+++.+.+...+++++.+.
T Consensus 97 -~~sfD~v~~~~~~h~~~~~~~~~e~~rvLkpgG~l~~~ 134 (257)
T 4hg2_A 97 -PASVDVAIAAQAMHWFDLDRFWAELRRVARPGAVFAAV 134 (257)
T ss_dssp -SSCEEEEEECSCCTTCCHHHHHHHHHHHEEEEEEEEEE
T ss_pred -CCcccEEEEeeehhHhhHHHHHHHHHHHcCCCCEEEEE
Confidence 3679999873221111 123455555443355555443
No 174
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.86 E-value=2e-08 Score=90.44 Aligned_cols=122 Identities=16% Similarity=0.168 Sum_probs=83.5
Q ss_pred hCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEE
Q 044572 295 YVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVL 374 (457)
Q Consensus 295 ~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~v 374 (457)
++.++.+|||+|||+|.++..++.. + .+|+|+|+++.+++.|++|.. +++++++|+.+.... .+.||+|
T Consensus 43 ~~~~~~~vLdiG~G~G~~~~~l~~~-~-~~v~~~D~~~~~~~~a~~~~~--------~~~~~~~d~~~~~~~-~~~~D~i 111 (195)
T 3cgg_A 43 MAPRGAKILDAGCGQGRIGGYLSKQ-G-HDVLGTDLDPILIDYAKQDFP--------EARWVVGDLSVDQIS-ETDFDLI 111 (195)
T ss_dssp HSCTTCEEEEETCTTTHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHCT--------TSEEEECCTTTSCCC-CCCEEEE
T ss_pred hccCCCeEEEECCCCCHHHHHHHHC-C-CcEEEEcCCHHHHHHHHHhCC--------CCcEEEcccccCCCC-CCceeEE
Confidence 3557889999999999999999986 3 499999999999999998752 468999998874321 3579999
Q ss_pred EECCCCCCc-c----HHHHHHHHhcCCCCcEEEEeccCCCCCchhchhhHHHHHHHhcccc
Q 044572 375 VVDPPRKGL-D----SSLVHALQSIGSAERKAKSLSESSSSMVKEEKRPWILRAKEASVQI 430 (457)
Q Consensus 375 i~DPPR~Gl-~----~~v~~~l~~~~~~~~ivyvs~~~~~c~~~~~~~~~~~~~~~~~~~~ 430 (457)
+++|+-... . ..+++.+.+.-.+++.++++.... .......+...+...+-..
T Consensus 112 ~~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~---~~~~~~~~~~~l~~~Gf~~ 169 (195)
T 3cgg_A 112 VSAGNVMGFLAEDGREPALANIHRALGADGRAVIGFGAG---RGWVFGDFLEVAERVGLEL 169 (195)
T ss_dssp EECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEETT---SSCCHHHHHHHHHHHTEEE
T ss_pred EECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCCC---CCcCHHHHHHHHHHcCCEE
Confidence 999763221 1 245555555434666666651111 1123456666666665433
No 175
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.86 E-value=1.2e-08 Score=102.25 Aligned_cols=101 Identities=16% Similarity=0.081 Sum_probs=74.4
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEEC
Q 044572 298 YGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVVD 377 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~D 377 (457)
++.+|||+|||+|.+++.+++. ++.+|+|||+++ +++.|+++++.+ +..++++++.+|+.+... .++||+|+.+
T Consensus 50 ~~~~VLDiGcGtG~ls~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~--~l~~~v~~~~~d~~~~~~--~~~~D~Ivs~ 123 (348)
T 2y1w_A 50 KDKIVLDVGCGSGILSFFAAQA-GARKIYAVEAST-MAQHAEVLVKSN--NLTDRIVVIPGKVEEVSL--PEQVDIIISE 123 (348)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-TCSEEEEEECST-HHHHHHHHHHHT--TCTTTEEEEESCTTTCCC--SSCEEEEEEC
T ss_pred CcCEEEEcCCCccHHHHHHHhC-CCCEEEEECCHH-HHHHHHHHHHHc--CCCCcEEEEEcchhhCCC--CCceeEEEEe
Confidence 6889999999999999999974 667999999996 889999999874 334689999999987532 2579999999
Q ss_pred CCCCCcc-H---HHHHHHHhcCCCCcEEEEe
Q 044572 378 PPRKGLD-S---SLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 378 PPR~Gl~-~---~v~~~l~~~~~~~~ivyvs 404 (457)
++-..+. . +.+..+.++-.++++++++
T Consensus 124 ~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 124 PMGYMLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp CCBTTBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred CchhcCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 8743221 1 2232333333466666653
No 176
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.85 E-value=2.9e-08 Score=94.19 Aligned_cols=108 Identities=10% Similarity=0.050 Sum_probs=78.5
Q ss_pred HHHHHhhCC--CCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCccc
Q 044572 289 LRKLQKYVP--YGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLS 366 (457)
Q Consensus 289 ~~~i~~~~~--~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~ 366 (457)
...+.+.+. ++.+|||+|||+|.++..++.. +..+|+|+|+++.+++.|++++. ..+++++++|+.+...
T Consensus 33 ~~~l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~------~~~~~~~~~d~~~~~~- 104 (253)
T 3g5l_A 33 WHELKKMLPDFNQKTVLDLGCGFGWHCIYAAEH-GAKKVLGIDLSERMLTEAKRKTT------SPVVCYEQKAIEDIAI- 104 (253)
T ss_dssp HHHHHTTCCCCTTCEEEEETCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHCC------CTTEEEEECCGGGCCC-
T ss_pred HHHHHHhhhccCCCEEEEECCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhhc------cCCeEEEEcchhhCCC-
Confidence 344555554 6889999999999999999985 45599999999999999998864 2578999999976532
Q ss_pred ccCCccEEEECCCCCCc--cHHHHHHHHhcCCCCcEEEEe
Q 044572 367 WLVGSDVLVVDPPRKGL--DSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 367 ~~~~~D~vi~DPPR~Gl--~~~v~~~l~~~~~~~~ivyvs 404 (457)
..+.||+|++.-.-..+ ...+++.+.+.-.+++.++++
T Consensus 105 ~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 105 EPDAYNVVLSSLALHYIASFDDICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCeEEEEEchhhhhhhhHHHHHHHHHHHcCCCcEEEEE
Confidence 13679999986542111 134566665544466776664
No 177
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=98.85 E-value=1.2e-08 Score=95.82 Aligned_cols=109 Identities=14% Similarity=0.095 Sum_probs=79.7
Q ss_pred HHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCccc
Q 044572 287 ILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLS 366 (457)
Q Consensus 287 ~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~ 366 (457)
.+++.+.+.+.++.+|||+|||+|.++..++.. + .+|+|||+++.+++.|+++.. ..+++++++|+.+....
T Consensus 42 ~~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~-~-~~v~~vD~s~~~~~~a~~~~~------~~~~~~~~~d~~~~~~~ 113 (242)
T 3l8d_A 42 TIIPFFEQYVKKEAEVLDVGCGDGYGTYKLSRT-G-YKAVGVDISEVMIQKGKERGE------GPDLSFIKGDLSSLPFE 113 (242)
T ss_dssp THHHHHHHHSCTTCEEEEETCTTSHHHHHHHHT-T-CEEEEEESCHHHHHHHHTTTC------BTTEEEEECBTTBCSSC
T ss_pred HHHHHHHHHcCCCCeEEEEcCCCCHHHHHHHHc-C-CeEEEEECCHHHHHHHHhhcc------cCCceEEEcchhcCCCC
Confidence 345566666777899999999999999999986 3 489999999999999987742 25799999999875321
Q ss_pred ccCCccEEEECCCCCCc--cHHHHHHHHhcCCCCcEEEEe
Q 044572 367 WLVGSDVLVVDPPRKGL--DSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 367 ~~~~~D~vi~DPPR~Gl--~~~v~~~l~~~~~~~~ivyvs 404 (457)
.+.||+|++.-.-.-+ ...+++.+.+.-.+++.++++
T Consensus 114 -~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 152 (242)
T 3l8d_A 114 -NEQFEAIMAINSLEWTEEPLRALNEIKRVLKSDGYACIA 152 (242)
T ss_dssp -TTCEEEEEEESCTTSSSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred -CCCccEEEEcChHhhccCHHHHHHHHHHHhCCCeEEEEE
Confidence 3679999885442211 124566665544467777765
No 178
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.85 E-value=4.6e-09 Score=105.13 Aligned_cols=109 Identities=16% Similarity=0.041 Sum_probs=79.3
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCC-CC----CcEEEEEccCCcCcccc---cC
Q 044572 298 YGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKS-VD----GNISWHNADNSIEPLSW---LV 369 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~-~~----~nv~~~~~d~~~~~~~~---~~ 369 (457)
...+|||+|||+|.++..+++. ++.+|++||+|+.+++.|++|+...+.+ .. ++++++.+|+.+++... .+
T Consensus 188 ~pkrVL~IGgG~G~~arellk~-~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~ 266 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKL-KPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 266 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTT-CCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCEEEEEECChhHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCC
Confidence 4689999999999999999875 4589999999999999999997642111 11 27999999999877542 36
Q ss_pred CccEEEECCCC--CC------ccHHHHHHH----HhcCCCCcEEEEeccC
Q 044572 370 GSDVLVVDPPR--KG------LDSSLVHAL----QSIGSAERKAKSLSES 407 (457)
Q Consensus 370 ~~D~vi~DPPR--~G------l~~~v~~~l----~~~~~~~~ivyvs~~~ 407 (457)
.||+||+|||. .| ...+..+.+ .+.-.+++++++.+++
T Consensus 267 ~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s 316 (364)
T 2qfm_A 267 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNC 316 (364)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred CceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCC
Confidence 79999999975 22 223455554 3333477777776433
No 179
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=98.85 E-value=1.5e-08 Score=96.25 Aligned_cols=116 Identities=13% Similarity=0.039 Sum_probs=82.2
Q ss_pred HHHHHHHHHHHHh---hCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEc
Q 044572 282 TRAFDILLRKLQK---YVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNA 358 (457)
Q Consensus 282 ~~~~~~l~~~i~~---~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~ 358 (457)
....+.+++.+.+ .+.++.+|||+|||+|.++..++.. ..+|+|+|+|+.+++.|++++. ....+++++.+
T Consensus 20 ~~~~~~~~~~l~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~----~~~~~~~~~~~ 93 (263)
T 2yqz_A 20 PEVAGQIATAMASAVHPKGEEPVFLELGVGTGRIALPLIAR--GYRYIALDADAAMLEVFRQKIA----GVDRKVQVVQA 93 (263)
T ss_dssp HHHHHHHHHHHHHHCCCSSSCCEEEEETCTTSTTHHHHHTT--TCEEEEEESCHHHHHHHHHHTT----TSCTTEEEEES
T ss_pred hHHHHHHHHHHHHhhcCCCCCCEEEEeCCcCCHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhh----ccCCceEEEEc
Confidence 4556666666643 3456889999999999999999975 3599999999999999999872 23468999999
Q ss_pred cCCcCcccccCCccEEEECCCCCCc--cHHHHHHHHhcCCCCcEEEEe
Q 044572 359 DNSIEPLSWLVGSDVLVVDPPRKGL--DSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 359 d~~~~~~~~~~~~D~vi~DPPR~Gl--~~~v~~~l~~~~~~~~ivyvs 404 (457)
|+.+... ..+.||+|++.-.-.-+ ...+++.+.+.-.+++.++++
T Consensus 94 d~~~~~~-~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 94 DARAIPL-PDESVHGVIVVHLWHLVPDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp CTTSCCS-CTTCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccccCCC-CCCCeeEEEECCchhhcCCHHHHHHHHHHHCCCCcEEEEE
Confidence 9976532 13579999985432111 134555555543466666654
No 180
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=98.85 E-value=8.7e-09 Score=96.77 Aligned_cols=101 Identities=11% Similarity=-0.020 Sum_probs=74.1
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEEC
Q 044572 298 YGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVVD 377 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~D 377 (457)
++.+|||+|||+|.++..++.. ..+|+|||+++.+++.|++++... +...+++|+++|+.+... ...||+|+..
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~--~~~fD~v~~~ 139 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMASP--ERFVVGLDISESALAKANETYGSS--PKAEYFSFVKEDVFTWRP--TELFDLIFDY 139 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCBT--TEEEEEECSCHHHHHHHHHHHTTS--GGGGGEEEECCCTTTCCC--SSCEEEEEEE
T ss_pred CCCCEEEeCCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHHHhhcc--CCCcceEEEECchhcCCC--CCCeeEEEEC
Confidence 4569999999999999999864 358999999999999999998752 234679999999987542 3479999975
Q ss_pred CCCCCcc----HHHHHHHHhcCCCCcEEEEe
Q 044572 378 PPRKGLD----SSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 378 PPR~Gl~----~~v~~~l~~~~~~~~ivyvs 404 (457)
-.-.-+. ..+++.+.++-.+++.+++.
T Consensus 140 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 170 (235)
T 3lcc_A 140 VFFCAIEPEMRPAWAKSMYELLKPDGELITL 170 (235)
T ss_dssp SSTTTSCGGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhhhcCCHHHHHHHHHHHHHHCCCCcEEEEE
Confidence 5432222 34566665543456666553
No 181
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.85 E-value=1.4e-08 Score=97.05 Aligned_cols=109 Identities=14% Similarity=0.043 Sum_probs=80.3
Q ss_pred HHHHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcC
Q 044572 284 AFDILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIE 363 (457)
Q Consensus 284 ~~~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~ 363 (457)
..+.+.+.+...+.++.+|||+|||+|.++..++... .+|+|||+|+.+++.|++++. +++++++|+.+.
T Consensus 36 ~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~~--------~~~~~~~d~~~~ 105 (263)
T 3pfg_A 36 EAADLAALVRRHSPKAASLLDVACGTGMHLRHLADSF--GTVEGLELSADMLAIARRRNP--------DAVLHHGDMRDF 105 (263)
T ss_dssp HHHHHHHHHHHHCTTCCEEEEETCTTSHHHHHHTTTS--SEEEEEESCHHHHHHHHHHCT--------TSEEEECCTTTC
T ss_pred HHHHHHHHHHhhCCCCCcEEEeCCcCCHHHHHHHHcC--CeEEEEECCHHHHHHHHhhCC--------CCEEEECChHHC
Confidence 4455566666666677899999999999999999753 489999999999999998742 579999999875
Q ss_pred cccccCCccEEEECC-CCCCcc-----HHHHHHHHhcCCCCcEEEEe
Q 044572 364 PLSWLVGSDVLVVDP-PRKGLD-----SSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 364 ~~~~~~~~D~vi~DP-PR~Gl~-----~~v~~~l~~~~~~~~ivyvs 404 (457)
.. .+.||+|++.. .-.-+. ..+++.+.+...+++.++++
T Consensus 106 ~~--~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 106 SL--GRRFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp CC--SCCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred Cc--cCCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 43 46899999975 321121 13455555544577777775
No 182
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.85 E-value=4.2e-09 Score=99.31 Aligned_cols=76 Identities=12% Similarity=-0.024 Sum_probs=62.4
Q ss_pred CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccc-cCCccEEE
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSW-LVGSDVLV 375 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~-~~~~D~vi 375 (457)
.++.+|||+|||+|.++..++.. +..+|+|||+|+.+++.|+++++.+ . .+++++++|+.+....+ .+.||+|+
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~---~-~~v~~~~~d~~~~~~~~~~~~fD~V~ 133 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEA-PIDEHWIIECNDGVFQRLRDWAPRQ---T-HKVIPLKGLWEDVAPTLPDGHFDGIL 133 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTS-CEEEEEEEECCHHHHHHHHHHGGGC---S-SEEEEEESCHHHHGGGSCTTCEEEEE
T ss_pred CCCCeEEEEeccCCHHHHHHHhc-CCCeEEEEcCCHHHHHHHHHHHHhc---C-CCeEEEecCHHHhhcccCCCceEEEE
Confidence 46789999999999999999863 4458999999999999999998763 2 57999999997753222 25799999
Q ss_pred EC
Q 044572 376 VD 377 (457)
Q Consensus 376 ~D 377 (457)
+|
T Consensus 134 ~d 135 (236)
T 1zx0_A 134 YD 135 (236)
T ss_dssp EC
T ss_pred EC
Confidence 95
No 183
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.84 E-value=3e-08 Score=90.63 Aligned_cols=103 Identities=12% Similarity=-0.068 Sum_probs=75.6
Q ss_pred hhCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccE
Q 044572 294 KYVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDV 373 (457)
Q Consensus 294 ~~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~ 373 (457)
..+.++ +|||+|||+|.++..++.. + .+|+|+|+++.+++.|+++++..+ .+++++++|+.+... ..+.||+
T Consensus 26 ~~~~~~-~vLdiGcG~G~~~~~l~~~-~-~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~d~~~~~~-~~~~fD~ 97 (202)
T 2kw5_A 26 NQIPQG-KILCLAEGEGRNACFLASL-G-YEVTAVDQSSVGLAKAKQLAQEKG----VKITTVQSNLADFDI-VADAWEG 97 (202)
T ss_dssp HHSCSS-EEEECCCSCTHHHHHHHTT-T-CEEEEECSSHHHHHHHHHHHHHHT----CCEEEECCBTTTBSC-CTTTCSE
T ss_pred HhCCCC-CEEEECCCCCHhHHHHHhC-C-CeEEEEECCHHHHHHHHHHHHhcC----CceEEEEcChhhcCC-CcCCccE
Confidence 335566 9999999999999999975 3 499999999999999999987632 278999999877532 1357999
Q ss_pred EEECCCCCCc--cHHHHHHHHhcCCCCcEEEEe
Q 044572 374 LVVDPPRKGL--DSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 374 vi~DPPR~Gl--~~~v~~~l~~~~~~~~ivyvs 404 (457)
|++.-..... ...+++.+.+.-.+++.++++
T Consensus 98 v~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 130 (202)
T 2kw5_A 98 IVSIFCHLPSSLRQQLYPKVYQGLKPGGVFILE 130 (202)
T ss_dssp EEEECCCCCHHHHHHHHHHHHTTCCSSEEEEEE
T ss_pred EEEEhhcCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 9986432211 124556666655577777775
No 184
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.84 E-value=6.8e-09 Score=103.84 Aligned_cols=77 Identities=12% Similarity=0.048 Sum_probs=63.3
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCC-----CEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCcc
Q 044572 298 YGASVTDLYAGAGVIGLSLAAARKC-----RSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSD 372 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~~~~-----~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D 372 (457)
++.+|||+|||+|.+++.++..... .+|+|+|+++.+++.|+.|+...+ . ++.++++|+.... ....||
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g---~-~~~i~~~D~l~~~--~~~~fD 203 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQR---Q-KMTLLHQDGLANL--LVDPVD 203 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHT---C-CCEEEESCTTSCC--CCCCEE
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCC---C-CceEEECCCCCcc--ccCCcc
Confidence 4679999999999999999875321 589999999999999999998632 2 5789999987643 235799
Q ss_pred EEEECCCC
Q 044572 373 VLVVDPPR 380 (457)
Q Consensus 373 ~vi~DPPR 380 (457)
+|+.|||.
T Consensus 204 ~Ii~NPPf 211 (344)
T 2f8l_A 204 VVISDLPV 211 (344)
T ss_dssp EEEEECCC
T ss_pred EEEECCCC
Confidence 99999994
No 185
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.84 E-value=1.4e-08 Score=95.40 Aligned_cols=110 Identities=12% Similarity=-0.030 Sum_probs=78.1
Q ss_pred HHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCccc
Q 044572 287 ILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLS 366 (457)
Q Consensus 287 ~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~ 366 (457)
.+.+.+.....++.+|||+|||+|.++..++... .+|+|+|+++.+++.|++++...+ .+++++++|+.+...
T Consensus 26 ~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~--~~~~~~D~s~~~~~~a~~~~~~~~----~~~~~~~~d~~~~~~- 98 (246)
T 1y8c_A 26 FIIEKCVENNLVFDDYLDLACGTGNLTENLCPKF--KNTWAVDLSQEMLSEAENKFRSQG----LKPRLACQDISNLNI- 98 (246)
T ss_dssp HHHHHHHTTTCCTTEEEEETCTTSTTHHHHGGGS--SEEEEECSCHHHHHHHHHHHHHTT----CCCEEECCCGGGCCC-
T ss_pred HHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHCC--CcEEEEECCHHHHHHHHHHHhhcC----CCeEEEecccccCCc-
Confidence 3333333332367899999999999999999863 489999999999999999987632 278999999877543
Q ss_pred ccCCccEEEECC-CCCCc-----cHHHHHHHHhcCCCCcEEEEe
Q 044572 367 WLVGSDVLVVDP-PRKGL-----DSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 367 ~~~~~D~vi~DP-PR~Gl-----~~~v~~~l~~~~~~~~ivyvs 404 (457)
.+.||+|++.. .-.-+ ...+++.+.+.-.+++.++++
T Consensus 99 -~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 141 (246)
T 1y8c_A 99 -NRKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFD 141 (246)
T ss_dssp -SCCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred -cCCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 26799999977 32111 123555555544466666664
No 186
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.84 E-value=9e-09 Score=97.42 Aligned_cols=79 Identities=11% Similarity=-0.041 Sum_probs=65.3
Q ss_pred CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccc-cCCccEEE
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSW-LVGSDVLV 375 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~-~~~~D~vi 375 (457)
.+|.+|||+|||+|.++..+++.. ..+|++||+|+.+++.|+++++.. ..+++++.+|+.+..... ...||.|+
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~-~~~v~~id~~~~~~~~a~~~~~~~----~~~~~~~~~~a~~~~~~~~~~~FD~i~ 133 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAP-IDEHWIIECNDGVFQRLRDWAPRQ----THKVIPLKGLWEDVAPTLPDGHFDGIL 133 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSC-EEEEEEEECCHHHHHHHHHHGGGC----SSEEEEEESCHHHHGGGSCTTCEEEEE
T ss_pred cCCCeEEEECCCccHHHHHHHHhC-CcEEEEEeCCHHHHHHHHHHHhhC----CCceEEEeehHHhhcccccccCCceEE
Confidence 478999999999999999998743 468999999999999999998863 247899999987654433 35799999
Q ss_pred ECCCC
Q 044572 376 VDPPR 380 (457)
Q Consensus 376 ~DPPR 380 (457)
.|+.-
T Consensus 134 ~D~~~ 138 (236)
T 3orh_A 134 YDTYP 138 (236)
T ss_dssp ECCCC
T ss_pred Eeeee
Confidence 99864
No 187
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.84 E-value=1e-08 Score=101.34 Aligned_cols=101 Identities=13% Similarity=0.004 Sum_probs=77.8
Q ss_pred eEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccc-cCCccEEEECCC
Q 044572 301 SVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSW-LVGSDVLVVDPP 379 (457)
Q Consensus 301 ~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~-~~~~D~vi~DPP 379 (457)
+|||+|||+|.++..+++.....+|++||+++++++.|+++... ....+++++.+|+.+++... .+.||+||+|..
T Consensus 92 rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~---~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~ 168 (317)
T 3gjy_A 92 RITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDI---PRAPRVKIRVDDARMVAESFTPASRDVIIRDVF 168 (317)
T ss_dssp EEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCC---CCTTTEEEEESCHHHHHHTCCTTCEEEEEECCS
T ss_pred EEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccc---cCCCceEEEECcHHHHHhhccCCCCCEEEECCC
Confidence 99999999999999999854345899999999999999999764 23468999999998765443 357999999965
Q ss_pred CC-C-----ccHHHHHHHHhcCCCCcEEEEe
Q 044572 380 RK-G-----LDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 380 R~-G-----l~~~v~~~l~~~~~~~~ivyvs 404 (457)
.. + ...++++.+.+.-.+++++.+.
T Consensus 169 ~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~ 199 (317)
T 3gjy_A 169 AGAITPQNFTTVEFFEHCHRGLAPGGLYVAN 199 (317)
T ss_dssp TTSCCCGGGSBHHHHHHHHHHEEEEEEEEEE
T ss_pred CccccchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 32 1 1356777776654577777665
No 188
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=98.83 E-value=1.8e-08 Score=94.26 Aligned_cols=75 Identities=8% Similarity=-0.078 Sum_probs=61.2
Q ss_pred hCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccc-cCCccE
Q 044572 295 YVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSW-LVGSDV 373 (457)
Q Consensus 295 ~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~-~~~~D~ 373 (457)
.+.++.+|||+|||+|.++..++.. ..+|+|||+++.+++.|++| . .+++++++|+.+.+... .+.||+
T Consensus 45 ~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~--~------~~~~~~~~d~~~~~~~~~~~~fD~ 114 (226)
T 3m33_A 45 LLTPQTRVLEAGCGHGPDAARFGPQ--AARWAAYDFSPELLKLARAN--A------PHADVYEWNGKGELPAGLGAPFGL 114 (226)
T ss_dssp HCCTTCEEEEESCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHH--C------TTSEEEECCSCSSCCTTCCCCEEE
T ss_pred cCCCCCeEEEeCCCCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHh--C------CCceEEEcchhhccCCcCCCCEEE
Confidence 3457899999999999999999986 34999999999999999987 1 36799999996543322 467999
Q ss_pred EEECCC
Q 044572 374 LVVDPP 379 (457)
Q Consensus 374 vi~DPP 379 (457)
|+.++.
T Consensus 115 v~~~~~ 120 (226)
T 3m33_A 115 IVSRRG 120 (226)
T ss_dssp EEEESC
T ss_pred EEeCCC
Confidence 999754
No 189
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=98.82 E-value=2.1e-08 Score=96.43 Aligned_cols=104 Identities=17% Similarity=0.148 Sum_probs=77.5
Q ss_pred CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEE
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVV 376 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~ 376 (457)
.++.+|||+|||+|.++..++......+|+|||+++.+++.|++++..+ ...+++++.+|+.+.... .+.||+|++
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~~~d~~~~~~~-~~~fD~v~~ 111 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKN---GIKNVKFLQANIFSLPFE-DSSFDHIFV 111 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHT---TCCSEEEEECCGGGCCSC-TTCEEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc---CCCCcEEEEcccccCCCC-CCCeeEEEE
Confidence 4688999999999999999998754569999999999999999999873 346899999999875422 367999998
Q ss_pred CCCCCCc--cHHHHHHHHhcCCCCcEEEEe
Q 044572 377 DPPRKGL--DSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 377 DPPR~Gl--~~~v~~~l~~~~~~~~ivyvs 404 (457)
.-.-.-+ ...+++.+.++-.+++.+++.
T Consensus 112 ~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~ 141 (276)
T 3mgg_A 112 CFVLEHLQSPEEALKSLKKVLKPGGTITVI 141 (276)
T ss_dssp ESCGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred echhhhcCCHHHHHHHHHHHcCCCcEEEEE
Confidence 5432111 124666665544466666653
No 190
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=98.82 E-value=1.8e-08 Score=92.82 Aligned_cols=103 Identities=14% Similarity=0.035 Sum_probs=74.5
Q ss_pred HHHHHhhCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCccccc
Q 044572 289 LRKLQKYVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWL 368 (457)
Q Consensus 289 ~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~ 368 (457)
+..+...+.++.+|||+|||+|.++..++.. + .+|+|||+++.+++.|++++. ++++.+|+.+.. ..
T Consensus 34 ~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~-~~v~~vD~s~~~~~~a~~~~~---------~~~~~~d~~~~~--~~ 100 (211)
T 3e23_A 34 LTKFLGELPAGAKILELGCGAGYQAEAMLAA-G-FDVDATDGSPELAAEASRRLG---------RPVRTMLFHQLD--AI 100 (211)
T ss_dssp HHHHHTTSCTTCEEEESSCTTSHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHT---------SCCEECCGGGCC--CC
T ss_pred HHHHHHhcCCCCcEEEECCCCCHHHHHHHHc-C-CeEEEECCCHHHHHHHHHhcC---------CceEEeeeccCC--CC
Confidence 3444445567889999999999999999986 3 499999999999999998862 356788887654 34
Q ss_pred CCccEEEECCCCCCcc----HHHHHHHHhcCCCCcEEEEe
Q 044572 369 VGSDVLVVDPPRKGLD----SSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 369 ~~~D~vi~DPPR~Gl~----~~v~~~l~~~~~~~~ivyvs 404 (457)
+.||+|++...-.-+. ..+++.+.+...+++.++++
T Consensus 101 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 140 (211)
T 3e23_A 101 DAYDAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYAS 140 (211)
T ss_dssp SCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CcEEEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 6899999976532222 13455555443466676665
No 191
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.82 E-value=1.4e-08 Score=95.91 Aligned_cols=107 Identities=13% Similarity=0.099 Sum_probs=75.2
Q ss_pred HHHHhhCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccc--
Q 044572 290 RKLQKYVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSW-- 367 (457)
Q Consensus 290 ~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~-- 367 (457)
..+...+.++.+|||+|||+|.++..++.... +|+|||+|+.+++.|++++.. .+++|+++|+.+.....
T Consensus 48 ~~~~~~~~~~~~vLD~GcG~G~~~~~la~~~~--~v~gvD~s~~~~~~a~~~~~~------~~~~~~~~d~~~~~~~~~~ 119 (245)
T 3ggd_A 48 PRFELLFNPELPLIDFACGNGTQTKFLSQFFP--RVIGLDVSKSALEIAAKENTA------ANISYRLLDGLVPEQAAQI 119 (245)
T ss_dssp HHHTTTSCTTSCEEEETCTTSHHHHHHHHHSS--CEEEEESCHHHHHHHHHHSCC------TTEEEEECCTTCHHHHHHH
T ss_pred HHHhhccCCCCeEEEEcCCCCHHHHHHHHhCC--CEEEEECCHHHHHHHHHhCcc------cCceEEECccccccccccc
Confidence 33333445788999999999999999998644 899999999999999988632 47999999998743211
Q ss_pred --cCCccEEEECCCCCCcc----HHHHHHHHhcCCCCcEEEEe
Q 044572 368 --LVGSDVLVVDPPRKGLD----SSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 368 --~~~~D~vi~DPPR~Gl~----~~v~~~l~~~~~~~~ivyvs 404 (457)
...||+|+++---.-+. ..+++.+.+...+++.+++.
T Consensus 120 ~~~~~~d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 162 (245)
T 3ggd_A 120 HSEIGDANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLI 162 (245)
T ss_dssp HHHHCSCEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEE
T ss_pred ccccCccEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 12489998875432222 24555555543466655554
No 192
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=98.82 E-value=1.1e-08 Score=94.63 Aligned_cols=104 Identities=16% Similarity=0.125 Sum_probs=76.2
Q ss_pred CCCCeEEEEcccccHHHHHHHhhC-CCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEE
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAAR-KCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLV 375 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~-~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi 375 (457)
.++.+|||+|||+|.++..++... ...+|+|||+++.+++.|+++++.. ...+++++.+|+.+.... .+.||+|+
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~~~d~~~~~~~-~~~fD~v~ 111 (219)
T 3dh0_A 36 KEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKL---GLKNVEVLKSEENKIPLP-DNTVDFIF 111 (219)
T ss_dssp CTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHH---TCTTEEEEECBTTBCSSC-SSCEEEEE
T ss_pred CCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHc---CCCcEEEEecccccCCCC-CCCeeEEE
Confidence 468899999999999999999874 2359999999999999999998773 235899999999775321 35799999
Q ss_pred ECCCCCCc--cHHHHHHHHhcCCCCcEEEEe
Q 044572 376 VDPPRKGL--DSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 376 ~DPPR~Gl--~~~v~~~l~~~~~~~~ivyvs 404 (457)
+.-.-..+ ...+++.+.++-.+++.++++
T Consensus 112 ~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~ 142 (219)
T 3dh0_A 112 MAFTFHELSEPLKFLEELKRVAKPFAYLAII 142 (219)
T ss_dssp EESCGGGCSSHHHHHHHHHHHEEEEEEEEEE
T ss_pred eehhhhhcCCHHHHHHHHHHHhCCCeEEEEE
Confidence 86542211 134555555543456666654
No 193
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=98.81 E-value=1.7e-08 Score=96.69 Aligned_cols=104 Identities=16% Similarity=0.010 Sum_probs=70.9
Q ss_pred CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhh---------CCC-----CCCCcEEEEEccCCc
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSR---------LPK-----SVDGNISWHNADNSI 362 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~---------~~~-----~~~~nv~~~~~d~~~ 362 (457)
.++.+|||+|||+|.++..||+. |. +|+|||+|+.|++.|+++... .+. ....+++|+++|+.+
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~-G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~ 144 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADR-GH-TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFD 144 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHT-TC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTT
T ss_pred CCCCeEEEeCCCCcHHHHHHHHC-CC-eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcccc
Confidence 36789999999999999999985 43 899999999999999876531 000 012579999999988
Q ss_pred CcccccCCccEEEECCCCCCc----cHHHHHHHHhcCCCCcEEE
Q 044572 363 EPLSWLVGSDVLVVDPPRKGL----DSSLVHALQSIGSAERKAK 402 (457)
Q Consensus 363 ~~~~~~~~~D~vi~DPPR~Gl----~~~v~~~l~~~~~~~~ivy 402 (457)
......+.||+|+..---.-+ ...+++.+.++-.+++.++
T Consensus 145 l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~ 188 (252)
T 2gb4_A 145 LPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYL 188 (252)
T ss_dssp GGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEE
T ss_pred CCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEE
Confidence 643322689999853221111 1235566655434555554
No 194
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=98.80 E-value=3.2e-08 Score=96.19 Aligned_cols=104 Identities=14% Similarity=0.018 Sum_probs=75.4
Q ss_pred CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEE
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVV 376 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~ 376 (457)
.++.+|||+|||+|.++..+++..+ .+|+|||+++.+++.|+++++.. +...+++++.+|+.+.... .+.||+|++
T Consensus 81 ~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~gvD~s~~~~~~a~~~~~~~--~~~~~~~~~~~d~~~~~~~-~~~fD~v~~ 156 (297)
T 2o57_A 81 QRQAKGLDLGAGYGGAARFLVRKFG-VSIDCLNIAPVQNKRNEEYNNQA--GLADNITVKYGSFLEIPCE-DNSYDFIWS 156 (297)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHHH--TCTTTEEEEECCTTSCSSC-TTCEEEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHhc--CCCcceEEEEcCcccCCCC-CCCEeEEEe
Confidence 4688999999999999999998634 38999999999999999998763 3346899999999875321 357999987
Q ss_pred CCCC--CCccHHHHHHHHhcCCCCcEEEEe
Q 044572 377 DPPR--KGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 377 DPPR--~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
.-.- ..-...+++.+.+.-.+++.++++
T Consensus 157 ~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 186 (297)
T 2o57_A 157 QDAFLHSPDKLKVFQECARVLKPRGVMAIT 186 (297)
T ss_dssp ESCGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred cchhhhcCCHHHHHHHHHHHcCCCeEEEEE
Confidence 5331 111234566665543466666554
No 195
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.80 E-value=8.4e-09 Score=106.91 Aligned_cols=123 Identities=14% Similarity=0.105 Sum_probs=85.5
Q ss_pred CCCCCCCHHHHHHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhC-------------CCCEEEEEeCCHHHHHHHHHH
Q 044572 275 SSFGQANTRAFDILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAAR-------------KCRSVKCVEINKESQLSFEKT 341 (457)
Q Consensus 275 ~~FfQ~n~~~~~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~-------------~~~~V~gVE~~~~av~~A~~N 341 (457)
+.||. .+...+.|++.+. ...+.+|||.+||+|.|.+.+++.. ...+++|+|+++.+++.|+.|
T Consensus 151 G~fyT-P~~v~~~mv~~l~--~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~n 227 (445)
T 2okc_A 151 GQYFT-PRPLIQAMVDCIN--PQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMN 227 (445)
T ss_dssp GGGCC-CHHHHHHHHHHHC--CCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHH
T ss_pred CcccC-cHHHHHHHHHHhC--CCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHH
Confidence 44554 4555555555432 1357899999999999999988642 124799999999999999999
Q ss_pred HhhCCCCCC-CcEEEEEccCCcCcccccCCccEEEECCCCCCccH-------------------H-HHHHHHhcCCCCcE
Q 044572 342 VSRLPKSVD-GNISWHNADNSIEPLSWLVGSDVLVVDPPRKGLDS-------------------S-LVHALQSIGSAERK 400 (457)
Q Consensus 342 a~~~~~~~~-~nv~~~~~d~~~~~~~~~~~~D~vi~DPPR~Gl~~-------------------~-v~~~l~~~~~~~~i 400 (457)
+...+ .. .++.++++|+..... ...||+|+.|||..+... . +.+.+..+++.+++
T Consensus 228 l~l~g--~~~~~~~i~~gD~l~~~~--~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~ 303 (445)
T 2okc_A 228 LYLHG--IGTDRSPIVCEDSLEKEP--STLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRA 303 (445)
T ss_dssp HHHTT--CCSSCCSEEECCTTTSCC--SSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEE
T ss_pred HHHhC--CCcCCCCEeeCCCCCCcc--cCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEE
Confidence 98732 21 167789999876432 247999999999765321 2 34444556656777
Q ss_pred EEEe
Q 044572 401 AKSL 404 (457)
Q Consensus 401 vyvs 404 (457)
++|.
T Consensus 304 a~V~ 307 (445)
T 2okc_A 304 AVVL 307 (445)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7776
No 196
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.79 E-value=2e-08 Score=94.24 Aligned_cols=107 Identities=11% Similarity=0.108 Sum_probs=76.5
Q ss_pred HHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcc
Q 044572 286 DILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPL 365 (457)
Q Consensus 286 ~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~ 365 (457)
+.+++.+.... ++.+|||+|||+|.++..++... .+|+|||+|+.+++.|++++.. +++++++|+.+..
T Consensus 31 ~~~~~~l~~~~-~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~~~-------~v~~~~~d~~~~~- 99 (250)
T 2p7i_A 31 PFMVRAFTPFF-RPGNLLELGSFKGDFTSRLQEHF--NDITCVEASEEAISHAQGRLKD-------GITYIHSRFEDAQ- 99 (250)
T ss_dssp HHHHHHHGGGC-CSSCEEEESCTTSHHHHHHTTTC--SCEEEEESCHHHHHHHHHHSCS-------CEEEEESCGGGCC-
T ss_pred HHHHHHHHhhc-CCCcEEEECCCCCHHHHHHHHhC--CcEEEEeCCHHHHHHHHHhhhC-------CeEEEEccHHHcC-
Confidence 44445544443 57899999999999999999753 3899999999999999987531 6899999998763
Q ss_pred cccCCccEEEECCCCCC--ccHHHHHHHH-hcCCCCcEEEEe
Q 044572 366 SWLVGSDVLVVDPPRKG--LDSSLVHALQ-SIGSAERKAKSL 404 (457)
Q Consensus 366 ~~~~~~D~vi~DPPR~G--l~~~v~~~l~-~~~~~~~ivyvs 404 (457)
..+.||+|++.=--.- -...+++.+. +.-.+++.++++
T Consensus 100 -~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~~LkpgG~l~i~ 140 (250)
T 2p7i_A 100 -LPRRYDNIVLTHVLEHIDDPVALLKRINDDWLAEGGRLFLV 140 (250)
T ss_dssp -CSSCEEEEEEESCGGGCSSHHHHHHHHHHTTEEEEEEEEEE
T ss_pred -cCCcccEEEEhhHHHhhcCHHHHHHHHHHHhcCCCCEEEEE
Confidence 2367999987321000 0135777777 654577777775
No 197
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.79 E-value=1.5e-08 Score=95.99 Aligned_cols=108 Identities=9% Similarity=-0.082 Sum_probs=75.2
Q ss_pred HHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhh----CCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCC
Q 044572 286 DILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAA----RKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNS 361 (457)
Q Consensus 286 ~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~----~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~ 361 (457)
+.++..++... ++.+|||+|||+|.+++.+|+. ....+|+|||+++++++.|+ .. ..+++++++|+.
T Consensus 70 ~~~l~~~l~~~-~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~---~~-----~~~v~~~~gD~~ 140 (236)
T 2bm8_A 70 QAVYHDMLWEL-RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA---SD-----MENITLHQGDCS 140 (236)
T ss_dssp HHHHHHHHHHH-CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG---GG-----CTTEEEEECCSS
T ss_pred HHHHHHHHHhc-CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh---cc-----CCceEEEECcch
Confidence 33344444433 4689999999999999999986 23469999999999998876 11 257999999998
Q ss_pred cC--cccccC-CccEEEECCCCCCccHHHHHHHH--hcCCCCcEEEEe
Q 044572 362 IE--PLSWLV-GSDVLVVDPPRKGLDSSLVHALQ--SIGSAERKAKSL 404 (457)
Q Consensus 362 ~~--~~~~~~-~~D~vi~DPPR~Gl~~~v~~~l~--~~~~~~~ivyvs 404 (457)
+. +..... .||+|++|-..... ..++..+. .++ +++++.++
T Consensus 141 ~~~~l~~~~~~~fD~I~~d~~~~~~-~~~l~~~~r~~Lk-pGG~lv~~ 186 (236)
T 2bm8_A 141 DLTTFEHLREMAHPLIFIDNAHANT-FNIMKWAVDHLLE-EGDYFIIE 186 (236)
T ss_dssp CSGGGGGGSSSCSSEEEEESSCSSH-HHHHHHHHHHTCC-TTCEEEEC
T ss_pred hHHHHHhhccCCCCEEEECCchHhH-HHHHHHHHHhhCC-CCCEEEEE
Confidence 75 222223 69999998874322 34555554 455 66666664
No 198
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=98.78 E-value=3.6e-09 Score=102.13 Aligned_cols=129 Identities=10% Similarity=0.065 Sum_probs=88.0
Q ss_pred HHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCccc
Q 044572 287 ILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLS 366 (457)
Q Consensus 287 ~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~ 366 (457)
.+++.+..+ .+..+||+|+|||.+++.+.+ ++.+++.||.++++++..++|++. ..++++++.|+...+..
T Consensus 82 ~yf~~l~~~--n~~~~LDlfaGSGaLgiEaLS--~~d~~vfvE~~~~a~~~L~~Nl~~-----~~~~~V~~~D~~~~L~~ 152 (283)
T 2oo3_A 82 EYISVIKQI--NLNSTLSYYPGSPYFAINQLR--SQDRLYLCELHPTEYNFLLKLPHF-----NKKVYVNHTDGVSKLNA 152 (283)
T ss_dssp HHHHHHHHH--SSSSSCCEEECHHHHHHHHSC--TTSEEEEECCSHHHHHHHTTSCCT-----TSCEEEECSCHHHHHHH
T ss_pred HHHHHHHHh--cCCCceeEeCCcHHHHHHHcC--CCCeEEEEeCCHHHHHHHHHHhCc-----CCcEEEEeCcHHHHHHH
Confidence 455555553 356789999999999999986 358999999999999999999864 35799999998776543
Q ss_pred cc---CCccEEEECCCCC--CccHHHHHHHHhc--CCCCcEEEEeccCCCCCchhchhhHHHHHHHhc
Q 044572 367 WL---VGSDVLVVDPPRK--GLDSSLVHALQSI--GSAERKAKSLSESSSSMVKEEKRPWILRAKEAS 427 (457)
Q Consensus 367 ~~---~~~D~vi~DPPR~--Gl~~~v~~~l~~~--~~~~~ivyvs~~~~~c~~~~~~~~~~~~~~~~~ 427 (457)
.. .+||+|++|||+. +.-..+++.+.+. ..+.+++.+= +-+......+.|.+.+.+..
T Consensus 153 l~~~~~~fdLVfiDPPYe~k~~~~~vl~~L~~~~~r~~~Gi~v~W---YPi~~~~~~~~~~~~l~~~~ 217 (283)
T 2oo3_A 153 LLPPPEKRGLIFIDPSYERKEEYKEIPYAIKNAYSKFSTGLYCVW---YPVVNKAWTEQFLRKMREIS 217 (283)
T ss_dssp HCSCTTSCEEEEECCCCCSTTHHHHHHHHHHHHHHHCTTSEEEEE---EEESSHHHHHHHHHHHHHHC
T ss_pred hcCCCCCccEEEECCCCCCCcHHHHHHHHHHHhCccCCCeEEEEE---EeccchHHHHHHHHHHHhcC
Confidence 32 3699999999986 4555666666542 1234443331 00333344555666554443
No 199
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.78 E-value=9.3e-09 Score=98.59 Aligned_cols=101 Identities=8% Similarity=0.114 Sum_probs=72.4
Q ss_pred CCHHHHHHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCCCCE--EEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEE
Q 044572 280 ANTRAFDILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARKCRS--VKCVEINKESQLSFEKTVSRLPKSVDGNISWHN 357 (457)
Q Consensus 280 ~n~~~~~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~--V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~ 357 (457)
.+....+.+++.+. +.++++|||+|||+|.++. ++. . .+ |+|||+|+++++.+++|.+. ..|+++++
T Consensus 5 ~d~~i~~~iv~~~~--~~~~~~VLEIG~G~G~lt~-l~~-~--~~~~v~avEid~~~~~~a~~~~~~-----~~~v~~i~ 73 (252)
T 1qyr_A 5 NDQFVIDSIVSAIN--PQKGQAMVEIGPGLAALTE-PVG-E--RLDQLTVIELDRDLAARLQTHPFL-----GPKLTIYQ 73 (252)
T ss_dssp CCHHHHHHHHHHHC--CCTTCCEEEECCTTTTTHH-HHH-T--TCSCEEEECCCHHHHHHHHTCTTT-----GGGEEEEC
T ss_pred CCHHHHHHHHHhcC--CCCcCEEEEECCCCcHHHH-hhh-C--CCCeEEEEECCHHHHHHHHHHhcc-----CCceEEEE
Confidence 35555555555432 2467899999999999999 764 3 36 99999999999999987653 14799999
Q ss_pred ccCCcCcc-cc---cCCccEEEECCCCCCccHHHHHHH
Q 044572 358 ADNSIEPL-SW---LVGSDVLVVDPPRKGLDSSLVHAL 391 (457)
Q Consensus 358 ~d~~~~~~-~~---~~~~D~vi~DPPR~Gl~~~v~~~l 391 (457)
+|+.+... .. ....++||.|+|+.--++-+.+.+
T Consensus 74 ~D~~~~~~~~~~~~~~~~~~vvsNlPY~i~~~il~~ll 111 (252)
T 1qyr_A 74 QDAMTFNFGELAEKMGQPLRVFGNLPYNISTPLMFHLF 111 (252)
T ss_dssp SCGGGCCHHHHHHHHTSCEEEEEECCTTTHHHHHHHHH
T ss_pred CchhhCCHHHhhcccCCceEEEECCCCCccHHHHHHHH
Confidence 99987532 11 124579999999975444344444
No 200
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.77 E-value=2e-08 Score=97.27 Aligned_cols=107 Identities=15% Similarity=-0.019 Sum_probs=77.4
Q ss_pred hCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEE
Q 044572 295 YVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVL 374 (457)
Q Consensus 295 ~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~v 374 (457)
++.++.+|||+|||+|.++..++.. +..+|+|||+++.+++.|++++... +...+++++++|+.+......+.||+|
T Consensus 61 ~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~~~~~fD~v 137 (298)
T 1ri5_A 61 YTKRGDSVLDLGCGKGGDLLKYERA-GIGEYYGVDIAEVSINDARVRARNM--KRRFKVFFRAQDSYGRHMDLGKEFDVI 137 (298)
T ss_dssp HCCTTCEEEEETCTTTTTHHHHHHH-TCSEEEEEESCHHHHHHHHHHHHTS--CCSSEEEEEESCTTTSCCCCSSCEEEE
T ss_pred hCCCCCeEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHhc--CCCccEEEEECCccccccCCCCCcCEE
Confidence 3457899999999999999998875 4569999999999999999998863 233579999999987532123579999
Q ss_pred EECCCCC----Cc--cHHHHHHHHhcCCCCcEEEEe
Q 044572 375 VVDPPRK----GL--DSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 375 i~DPPR~----Gl--~~~v~~~l~~~~~~~~ivyvs 404 (457)
+++-.-. .. ...+++.+.+.-.+++.++++
T Consensus 138 ~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 173 (298)
T 1ri5_A 138 SSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMT 173 (298)
T ss_dssp EEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred EECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 9874321 11 123455555544466666665
No 201
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=98.77 E-value=3.4e-08 Score=95.82 Aligned_cols=102 Identities=12% Similarity=0.088 Sum_probs=75.8
Q ss_pred CCCCeEEEEcccccHHHHHHHhhCC-CCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEE
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAARK-CRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLV 375 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~~-~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi 375 (457)
.++.+|||+|||+|.+++.++...+ ..+|+|+|+|+.+++.|+++++..+ .|++|+++|+.+... .+.||+|+
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~----~~v~~~~~d~~~~~~--~~~fD~v~ 94 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLP----YDSEFLEGDATEIEL--NDKYDIAI 94 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSS----SEEEEEESCTTTCCC--SSCEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcC----CceEEEEcchhhcCc--CCCeeEEE
Confidence 3688999999999999999997643 3699999999999999999987632 389999999987543 35899999
Q ss_pred ECCCCCCc--cHHHHHHHHhcCCCCcEEEEe
Q 044572 376 VDPPRKGL--DSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 376 ~DPPR~Gl--~~~v~~~l~~~~~~~~ivyvs 404 (457)
+.-.-.-+ ...+++.+.+.-.+++.+++.
T Consensus 95 ~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 125 (284)
T 3gu3_A 95 CHAFLLHMTTPETMLQKMIHSVKKGGKIICF 125 (284)
T ss_dssp EESCGGGCSSHHHHHHHHHHTEEEEEEEEEE
T ss_pred ECChhhcCCCHHHHHHHHHHHcCCCCEEEEE
Confidence 86542111 134555555543466666653
No 202
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.77 E-value=4.3e-08 Score=94.07 Aligned_cols=106 Identities=11% Similarity=0.035 Sum_probs=76.6
Q ss_pred CCCCeEEEEcccccHHHHHHHhhCCC-CEEEEEeCCHH------HHHHHHHHHhhCCCCCCCcEEEEEcc-CCcCcccc-
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAARKC-RSVKCVEINKE------SQLSFEKTVSRLPKSVDGNISWHNAD-NSIEPLSW- 367 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~~~-~~V~gVE~~~~------av~~A~~Na~~~~~~~~~nv~~~~~d-~~~~~~~~- 367 (457)
.++.+|||+|||+|.+++.++...+. .+|+|||+|+. +++.|+++++.. +..++++++.+| .......+
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~~~~ 119 (275)
T 3bkx_A 42 KPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAG--PLGDRLTVHFNTNLSDDLGPIA 119 (275)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTS--TTGGGEEEECSCCTTTCCGGGT
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhc--CCCCceEEEECChhhhccCCCC
Confidence 47889999999999999999986432 59999999997 999999998763 233689999998 32211111
Q ss_pred cCCccEEEECCCCC--CccHHHHHHHHhcCCCCcEEEEe
Q 044572 368 LVGSDVLVVDPPRK--GLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 368 ~~~~D~vi~DPPR~--Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
.+.||+|++...-. .-...+.+.+..+.++++.+++.
T Consensus 120 ~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~ 158 (275)
T 3bkx_A 120 DQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVA 158 (275)
T ss_dssp TCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEE
T ss_pred CCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEE
Confidence 35799999976621 11234677777777656666664
No 203
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.77 E-value=2.8e-08 Score=94.03 Aligned_cols=100 Identities=14% Similarity=-0.037 Sum_probs=73.8
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEEC
Q 044572 298 YGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVVD 377 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~D 377 (457)
++.+|||+|||+|.++..++... ..+|+|||+++.+++.|++++.. . .+++++++|+.+... ..+.||+|++.
T Consensus 93 ~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~---~--~~~~~~~~d~~~~~~-~~~~fD~v~~~ 165 (254)
T 1xtp_A 93 GTSRALDCGAGIGRITKNLLTKL-YATTDLLEPVKHMLEEAKRELAG---M--PVGKFILASMETATL-PPNTYDLIVIQ 165 (254)
T ss_dssp CCSEEEEETCTTTHHHHHTHHHH-CSEEEEEESCHHHHHHHHHHTTT---S--SEEEEEESCGGGCCC-CSSCEEEEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHhh-cCEEEEEeCCHHHHHHHHHHhcc---C--CceEEEEccHHHCCC-CCCCeEEEEEc
Confidence 57899999999999999998754 56899999999999999998764 1 579999999877432 13579999986
Q ss_pred CCCCCcc----HHHHHHHHhcCCCCcEEEEe
Q 044572 378 PPRKGLD----SSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 378 PPR~Gl~----~~v~~~l~~~~~~~~ivyvs 404 (457)
-.-.-+. ..+++.+.+...+++.++++
T Consensus 166 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 196 (254)
T 1xtp_A 166 WTAIYLTDADFVKFFKHCQQALTPNGYIFFK 196 (254)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred chhhhCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 5422221 23455554443466666665
No 204
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.76 E-value=1.5e-08 Score=107.53 Aligned_cols=125 Identities=11% Similarity=0.041 Sum_probs=85.7
Q ss_pred CCCCCCCCHHHHHHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCC------------------CCEEEEEeCCHHHH
Q 044572 274 PSSFGQANTRAFDILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARK------------------CRSVKCVEINKESQ 335 (457)
Q Consensus 274 ~~~FfQ~n~~~~~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~------------------~~~V~gVE~~~~av 335 (457)
.+.||.. +...+.|++.+.. .++.+|+|.+||+|.|.+.++.... ...++|+|+++.++
T Consensus 148 ~G~fyTP-~~iv~~mv~~l~p--~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~ 224 (541)
T 2ar0_A 148 AGQYFTP-RPLIKTIIHLLKP--QPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTR 224 (541)
T ss_dssp --CCCCC-HHHHHHHHHHHCC--CTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHH
T ss_pred CCeeeCC-HHHHHHHHHHhcc--CCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHH
Confidence 4667764 4555555544321 3578999999999999998886421 13799999999999
Q ss_pred HHHHHHHhhCCCCCCCc-----EEEEEccCCcCcccccCCccEEEECCCCCCccH----------------HH-HHHHHh
Q 044572 336 LSFEKTVSRLPKSVDGN-----ISWHNADNSIEPLSWLVGSDVLVVDPPRKGLDS----------------SL-VHALQS 393 (457)
Q Consensus 336 ~~A~~Na~~~~~~~~~n-----v~~~~~d~~~~~~~~~~~~D~vi~DPPR~Gl~~----------------~v-~~~l~~ 393 (457)
+.|+.|+... +..+ +.++++|...........||+||.|||+.+... .+ .+.+..
T Consensus 225 ~lA~~nl~l~---gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~ 301 (541)
T 2ar0_A 225 RLALMNCLLH---DIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIET 301 (541)
T ss_dssp HHHHHHHHTT---TCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHh---CCCccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHH
Confidence 9999998763 2333 778999986532222357999999999765421 23 334555
Q ss_pred cCCCCcEEEEe
Q 044572 394 IGSAERKAKSL 404 (457)
Q Consensus 394 ~~~~~~ivyvs 404 (457)
+++.+++++|.
T Consensus 302 Lk~gGr~a~V~ 312 (541)
T 2ar0_A 302 LHPGGRAAVVV 312 (541)
T ss_dssp EEEEEEEEEEE
T ss_pred hCCCCEEEEEe
Confidence 66567788875
No 205
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.76 E-value=7.7e-09 Score=96.00 Aligned_cols=106 Identities=16% Similarity=0.088 Sum_probs=73.6
Q ss_pred CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhC-CCCCCCcEEEEEccCCcCcccccCCccEEE
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRL-PKSVDGNISWHNADNSIEPLSWLVGSDVLV 375 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~-~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi 375 (457)
.++.+|||+|||+|.+++.++......+|+|||+|+.+++.+.++++.. ......|++|+++|+.+.... ... |.|+
T Consensus 26 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~-~~~-d~v~ 103 (218)
T 3mq2_A 26 QYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPL-SGV-GELH 103 (218)
T ss_dssp TSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSC-CCE-EEEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCC-CCC-CEEE
Confidence 4688999999999999999998754569999999999888644444321 012346899999999875321 233 7777
Q ss_pred ECCCCCCcc-------HHHHHHHHhcCCCCcEEEEe
Q 044572 376 VDPPRKGLD-------SSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 376 ~DPPR~Gl~-------~~v~~~l~~~~~~~~ivyvs 404 (457)
+..+..... ..+++.+.+.-.+++.++++
T Consensus 104 ~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 139 (218)
T 3mq2_A 104 VLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVA 139 (218)
T ss_dssp EESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEE
T ss_pred EEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEE
Confidence 666543321 34566665554577777775
No 206
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.76 E-value=1.9e-08 Score=98.20 Aligned_cols=103 Identities=18% Similarity=0.184 Sum_probs=73.2
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEEC
Q 044572 298 YGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVVD 377 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~D 377 (457)
.+.+|||+|||+|.++..++.. + .+|+|||+++.+++.|++++...+.....+++++++|+.+... .+.||+|++.
T Consensus 82 ~~~~vLDlGcG~G~~~~~l~~~-~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~--~~~fD~v~~~ 157 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPFLDL-G-WEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL--DKRFGTVVIS 157 (299)
T ss_dssp CCSCEEEETCTTTTTHHHHHTT-T-CCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC--SCCEEEEEEC
T ss_pred CCCcEEEEeccCCHHHHHHHHc-C-CeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc--CCCcCEEEEC
Confidence 4559999999999999999976 3 4899999999999999999876310011579999999987543 4689988863
Q ss_pred CC-CCCcc----HHHHHHHHhcCCCCcEEEEe
Q 044572 378 PP-RKGLD----SSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 378 PP-R~Gl~----~~v~~~l~~~~~~~~ivyvs 404 (457)
.. ..-++ ..+++.+.+.-.+++.++++
T Consensus 158 ~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 189 (299)
T 3g2m_A 158 SGSINELDEADRRGLYASVREHLEPGGKFLLS 189 (299)
T ss_dssp HHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CcccccCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 11 11111 24555555543466777665
No 207
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.76 E-value=7e-08 Score=91.30 Aligned_cols=99 Identities=14% Similarity=0.001 Sum_probs=71.8
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEEC
Q 044572 298 YGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVVD 377 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~D 377 (457)
++.+|||+|||+|.+++.++.. + .+|+|||+|+.+++.|++|++..+ .+++++++|+.+... ...||+|++.
T Consensus 41 ~~~~vLDlGcG~G~~~~~l~~~-~-~~v~gvD~s~~~l~~a~~~~~~~~----~~v~~~~~d~~~~~~--~~~fD~v~~~ 112 (252)
T 1wzn_A 41 EVRRVLDLACGTGIPTLELAER-G-YEVVGLDLHEEMLRVARRKAKERN----LKIEFLQGDVLEIAF--KNEFDAVTMF 112 (252)
T ss_dssp CCCEEEEETCTTCHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHHHTT----CCCEEEESCGGGCCC--CSCEEEEEEC
T ss_pred CCCEEEEeCCCCCHHHHHHHHC-C-CeEEEEECCHHHHHHHHHHHHhcC----CceEEEECChhhccc--CCCccEEEEc
Confidence 5789999999999999999985 3 489999999999999999988632 268999999987532 3579999974
Q ss_pred CC---CCCc--cHHHHHHHHhcCCCCcEEEEe
Q 044572 378 PP---RKGL--DSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 378 PP---R~Gl--~~~v~~~l~~~~~~~~ivyvs 404 (457)
-. .... ...+++.+.+.-.++++++++
T Consensus 113 ~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~ 144 (252)
T 1wzn_A 113 FSTIMYFDEEDLRKLFSKVAEALKPGGVFITD 144 (252)
T ss_dssp SSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCchhcCCHHHHHHHHHHHHHHcCCCeEEEEe
Confidence 32 1111 123444444433466666654
No 208
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.75 E-value=3.9e-08 Score=90.52 Aligned_cols=116 Identities=15% Similarity=0.054 Sum_probs=78.3
Q ss_pred CCCCCCHHHH--HHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcE
Q 044572 276 SFGQANTRAF--DILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNI 353 (457)
Q Consensus 276 ~FfQ~n~~~~--~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv 353 (457)
.+++.+.... +...+.+..++.++.+|||+|||+|.++..+ +..+|+|+|+++.+++.|++++ .++
T Consensus 12 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l----~~~~v~~vD~s~~~~~~a~~~~--------~~~ 79 (211)
T 2gs9_A 12 AWYGTPLGAYVIAEEERALKGLLPPGESLLEVGAGTGYWLRRL----PYPQKVGVEPSEAMLAVGRRRA--------PEA 79 (211)
T ss_dssp GGGGSHHHHHHHHHHHHHHHTTCCCCSEEEEETCTTCHHHHHC----CCSEEEEECCCHHHHHHHHHHC--------TTS
T ss_pred HHhcccchhhhHHHHHHHHHHhcCCCCeEEEECCCCCHhHHhC----CCCeEEEEeCCHHHHHHHHHhC--------CCc
Confidence 3455443333 3333444455557889999999999999877 3458999999999999999875 256
Q ss_pred EEEEccCCcCcccccCCccEEEECCCCCCc--cHHHHHHHHhcCCCCcEEEEe
Q 044572 354 SWHNADNSIEPLSWLVGSDVLVVDPPRKGL--DSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 354 ~~~~~d~~~~~~~~~~~~D~vi~DPPR~Gl--~~~v~~~l~~~~~~~~ivyvs 404 (457)
+++++|+.+... ..+.||+|++.-.-.-+ ...+++.+.+.-.+++.++++
T Consensus 80 ~~~~~d~~~~~~-~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 131 (211)
T 2gs9_A 80 TWVRAWGEALPF-PGESFDVVLLFTTLEFVEDVERVLLEARRVLRPGGALVVG 131 (211)
T ss_dssp EEECCCTTSCCS-CSSCEEEEEEESCTTTCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEcccccCCC-CCCcEEEEEEcChhhhcCCHHHHHHHHHHHcCCCCEEEEE
Confidence 899999876532 13579999987543222 234565555544466666665
No 209
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=98.74 E-value=3.2e-08 Score=94.05 Aligned_cols=108 Identities=12% Similarity=0.052 Sum_probs=76.6
Q ss_pred HHHHhhC--CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccc
Q 044572 290 RKLQKYV--PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSW 367 (457)
Q Consensus 290 ~~i~~~~--~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~ 367 (457)
..+.+.+ .++.+|||+|||+|.++..++... ..+|+|||+|+.+++.|++++.. . .+++++++|+.+....
T Consensus 45 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~---~--~~~~~~~~d~~~~~~~- 117 (266)
T 3ujc_A 45 KKILSDIELNENSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMANERVSG---N--NKIIFEANDILTKEFP- 117 (266)
T ss_dssp HHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHTCCS---C--TTEEEEECCTTTCCCC-
T ss_pred HHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhhc---C--CCeEEEECccccCCCC-
Confidence 4444443 367899999999999999999863 34999999999999999988654 1 6899999999875321
Q ss_pred cCCccEEEECCCCCCc----cHHHHHHHHhcCCCCcEEEEe
Q 044572 368 LVGSDVLVVDPPRKGL----DSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 368 ~~~~D~vi~DPPR~Gl----~~~v~~~l~~~~~~~~ivyvs 404 (457)
.+.||+|+..-.-.-+ ...+++.+.+.-.+++.++++
T Consensus 118 ~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 158 (266)
T 3ujc_A 118 ENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLIT 158 (266)
T ss_dssp TTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEE
Confidence 3679999986442222 123455554443466666664
No 210
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.73 E-value=6.4e-08 Score=105.38 Aligned_cols=120 Identities=10% Similarity=-0.032 Sum_probs=82.0
Q ss_pred HHHHHHHHHHHhhCC--CCCeEEEEcccccHHHHHHHhhC-CCCEEEEEeCCHHHHHHHHHHHhhCCC---CCCCcEEEE
Q 044572 283 RAFDILLRKLQKYVP--YGASVTDLYAGAGVIGLSLAAAR-KCRSVKCVEINKESQLSFEKTVSRLPK---SVDGNISWH 356 (457)
Q Consensus 283 ~~~~~l~~~i~~~~~--~~~~vLDl~cG~G~~sl~lA~~~-~~~~V~gVE~~~~av~~A~~Na~~~~~---~~~~nv~~~ 356 (457)
...+..++.+.+.+. ++.+|||+|||+|.+++.+++.. ...+|+|||+++.|++.|+++++...+ ++..+++|+
T Consensus 704 PL~eqRle~LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefi 783 (950)
T 3htx_A 704 PLSKQRVEYALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLY 783 (950)
T ss_dssp CHHHHHHHHHHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEE
T ss_pred hHHHHHHHHHHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEE
Confidence 344444555555443 68899999999999999999764 125999999999999999986653211 234689999
Q ss_pred EccCCcCcccccCCccEEEECCCCCCccH----HHHHHHHhcCCCCcEEEEe
Q 044572 357 NADNSIEPLSWLVGSDVLVVDPPRKGLDS----SLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 357 ~~d~~~~~~~~~~~~D~vi~DPPR~Gl~~----~v~~~l~~~~~~~~ivyvs 404 (457)
++|+.+.... .+.||+|++.---.-+.. .+++.+.+.-.++ +++++
T Consensus 784 qGDa~dLp~~-d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIIS 833 (950)
T 3htx_A 784 DGSILEFDSR-LHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVS 833 (950)
T ss_dssp ESCTTSCCTT-SCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEE
T ss_pred ECchHhCCcc-cCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEE
Confidence 9999875432 367999998433221222 2445555544467 66665
No 211
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.73 E-value=6.3e-08 Score=88.69 Aligned_cols=81 Identities=19% Similarity=0.156 Sum_probs=60.1
Q ss_pred HHHHHHHHHHhh--CCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCC
Q 044572 284 AFDILLRKLQKY--VPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNS 361 (457)
Q Consensus 284 ~~~~l~~~i~~~--~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~ 361 (457)
.+-+|++...++ +.++.+|||||||+|.+++.+|+. ..+|+|||+++.+ ...+++++++|+.
T Consensus 9 a~~KL~ei~~~~~~~~~g~~VLDlG~G~G~~s~~la~~--~~~V~gvD~~~~~--------------~~~~v~~~~~D~~ 72 (191)
T 3dou_A 9 AAFKLEFLLDRYRVVRKGDAVIEIGSSPGGWTQVLNSL--ARKIISIDLQEME--------------EIAGVRFIRCDIF 72 (191)
T ss_dssp HHHHHHHHHHHHCCSCTTCEEEEESCTTCHHHHHHTTT--CSEEEEEESSCCC--------------CCTTCEEEECCTT
T ss_pred HHHHHHHHHHHcCCCCCCCEEEEEeecCCHHHHHHHHc--CCcEEEEeccccc--------------cCCCeEEEEcccc
Confidence 344555555444 457899999999999999999986 4599999999741 1247899999998
Q ss_pred cCccc------cc----CCccEEEECCCC
Q 044572 362 IEPLS------WL----VGSDVLVVDPPR 380 (457)
Q Consensus 362 ~~~~~------~~----~~~D~vi~DPPR 380 (457)
+.... .. +.||+|+.|++-
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~D~Vlsd~~~ 101 (191)
T 3dou_A 73 KETIFDDIDRALREEGIEKVDDVVSDAMA 101 (191)
T ss_dssp SSSHHHHHHHHHHHHTCSSEEEEEECCCC
T ss_pred CHHHHHHHHHHhhcccCCcceEEecCCCc
Confidence 74211 11 489999999863
No 212
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.73 E-value=3.2e-08 Score=99.42 Aligned_cols=87 Identities=18% Similarity=0.140 Sum_probs=69.7
Q ss_pred CCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCC---CCCcEEEEEccCCcCcccccCCcc
Q 044572 296 VPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKS---VDGNISWHNADNSIEPLSWLVGSD 372 (457)
Q Consensus 296 ~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~---~~~nv~~~~~d~~~~~~~~~~~~D 372 (457)
..+|++|||+|||.|+=++++|.....+.|+++|+++.-++..++|+++++.. ...++.+...|+..+.....+.||
T Consensus 146 ~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~fD 225 (359)
T 4fzv_A 146 LQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYD 225 (359)
T ss_dssp CCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCEE
T ss_pred CCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccCC
Confidence 35799999999999999999998655568999999999999999999874321 125788999998664332346799
Q ss_pred EEEECCCCCC
Q 044572 373 VLVVDPPRKG 382 (457)
Q Consensus 373 ~vi~DPPR~G 382 (457)
.|++|+|-+|
T Consensus 226 ~VLlDaPCSg 235 (359)
T 4fzv_A 226 RVLVDVPCTT 235 (359)
T ss_dssp EEEEECCCCC
T ss_pred EEEECCccCC
Confidence 9999999765
No 213
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.72 E-value=8.5e-08 Score=87.67 Aligned_cols=95 Identities=12% Similarity=-0.054 Sum_probs=70.7
Q ss_pred CCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEECC
Q 044572 299 GASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVVDP 378 (457)
Q Consensus 299 ~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~DP 378 (457)
+.+|||+|||+|.++..++.. + .+|+|||+++.+++.|+++. .+++++++|+.+... ..+.||+|++.-
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~-~-~~v~gvD~s~~~~~~a~~~~--------~~~~~~~~d~~~~~~-~~~~fD~v~~~~ 110 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL-G-HQIEGLEPATRLVELARQTH--------PSVTFHHGTITDLSD-SPKRWAGLLAWY 110 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT-T-CCEEEECCCHHHHHHHHHHC--------TTSEEECCCGGGGGG-SCCCEEEEEEES
T ss_pred CCeEEEecCCCCHHHHHHHhc-C-CeEEEEeCCHHHHHHHHHhC--------CCCeEEeCccccccc-CCCCeEEEEehh
Confidence 789999999999999999986 3 38999999999999999872 357999999977432 136799999855
Q ss_pred CCCCc----cHHHHHHHHhcCCCCcEEEEe
Q 044572 379 PRKGL----DSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 379 PR~Gl----~~~v~~~l~~~~~~~~ivyvs 404 (457)
.-.-+ ...+++.+.+.-.+++.++++
T Consensus 111 ~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 140 (203)
T 3h2b_A 111 SLIHMGPGELPDALVALRMAVEDGGGLLMS 140 (203)
T ss_dssp SSTTCCTTTHHHHHHHHHHTEEEEEEEEEE
T ss_pred hHhcCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 32111 134566665544467777765
No 214
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.72 E-value=1.4e-09 Score=103.57 Aligned_cols=86 Identities=12% Similarity=0.088 Sum_probs=67.3
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEEC
Q 044572 298 YGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVVD 377 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~D 377 (457)
++.+|||+|||+|.++..++... .+|+|||+|+.+++.|++|++. ..+++++++|+.+......+.| .||.|
T Consensus 29 ~~~~VLDiG~G~G~~~~~l~~~~--~~v~~id~~~~~~~~a~~~~~~-----~~~v~~~~~D~~~~~~~~~~~f-~vv~n 100 (245)
T 1yub_A 29 ETDTVYEIGTGKGHLTTKLAKIS--KQVTSIELDSHLFNLSSEKLKL-----NTRVTLIHQDILQFQFPNKQRY-KIVGN 100 (245)
T ss_dssp SSEEEEECSCCCSSCSHHHHHHS--SEEEESSSSCSSSSSSSCTTTT-----CSEEEECCSCCTTTTCCCSSEE-EEEEE
T ss_pred CCCEEEEEeCCCCHHHHHHHHhC--CeEEEEECCHHHHHHHHHHhcc-----CCceEEEECChhhcCcccCCCc-EEEEe
Confidence 67899999999999999999864 5999999999999999887652 2589999999987542211357 89999
Q ss_pred CCCCCccHHHHHHHH
Q 044572 378 PPRKGLDSSLVHALQ 392 (457)
Q Consensus 378 PPR~Gl~~~v~~~l~ 392 (457)
||+...+. ++..+.
T Consensus 101 ~Py~~~~~-~~~~~~ 114 (245)
T 1yub_A 101 IPYHLSTQ-IIKKVV 114 (245)
T ss_dssp CCSSSCHH-HHHHHH
T ss_pred CCccccHH-HHHHHH
Confidence 99876544 333333
No 215
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.72 E-value=3e-08 Score=96.78 Aligned_cols=106 Identities=15% Similarity=0.118 Sum_probs=73.8
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCC-----------------------------
Q 044572 298 YGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKS----------------------------- 348 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~----------------------------- 348 (457)
++.+|||+|||+|.+++.+|...+..+|+|||+++.+++.|++|++.....
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 578999999999999999998766679999999999999999987653100
Q ss_pred --------------------------CCCcEEEEEccCCcCccc----ccCCccEEEECCCCC---------CccHHHHH
Q 044572 349 --------------------------VDGNISWHNADNSIEPLS----WLVGSDVLVVDPPRK---------GLDSSLVH 389 (457)
Q Consensus 349 --------------------------~~~nv~~~~~d~~~~~~~----~~~~~D~vi~DPPR~---------Gl~~~v~~ 389 (457)
...|++|+++|+...... ....||+|++.---. ++ ..+++
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~-~~~l~ 204 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGL-KRMFR 204 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHH-HHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHH-HHHHH
Confidence 014899999998754311 136799999854310 11 12444
Q ss_pred HHHhcCCCCcEEEEe
Q 044572 390 ALQSIGSAERKAKSL 404 (457)
Q Consensus 390 ~l~~~~~~~~ivyvs 404 (457)
.+.++-.++++++++
T Consensus 205 ~~~~~LkpGG~lil~ 219 (292)
T 3g07_A 205 RIYRHLRPGGILVLE 219 (292)
T ss_dssp HHHHHEEEEEEEEEE
T ss_pred HHHHHhCCCcEEEEe
Confidence 444443477777775
No 216
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=98.71 E-value=6.8e-08 Score=88.94 Aligned_cols=106 Identities=12% Similarity=0.025 Sum_probs=74.0
Q ss_pred HHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCccc
Q 044572 287 ILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLS 366 (457)
Q Consensus 287 ~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~ 366 (457)
.+++.+.. +.++.+|||+|||+|.++..++... .+|+|+|+++.+++.|++ . ...+++++++|+.+..
T Consensus 36 ~~~~~l~~-~~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~~D~s~~~~~~a~~---~----~~~~~~~~~~d~~~~~-- 103 (218)
T 3ou2_A 36 AALERLRA-GNIRGDVLELASGTGYWTRHLSGLA--DRVTALDGSAEMIAEAGR---H----GLDNVEFRQQDLFDWT-- 103 (218)
T ss_dssp HHHHHHTT-TTSCSEEEEESCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHGG---G----CCTTEEEEECCTTSCC--
T ss_pred HHHHHHhc-CCCCCeEEEECCCCCHHHHHHHhcC--CeEEEEeCCHHHHHHHHh---c----CCCCeEEEecccccCC--
Confidence 34444333 3467899999999999999999873 499999999999999987 2 1257999999998762
Q ss_pred ccCCccEEEECCCCCCcc----HHHHHHHHhcCCCCcEEEEe
Q 044572 367 WLVGSDVLVVDPPRKGLD----SSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 367 ~~~~~D~vi~DPPR~Gl~----~~v~~~l~~~~~~~~ivyvs 404 (457)
..+.||+|++.---.-+. ..+++.+.+.-.+++.++++
T Consensus 104 ~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 145 (218)
T 3ou2_A 104 PDRQWDAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFV 145 (218)
T ss_dssp CSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCceeEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 246899999864321122 23455555443456665554
No 217
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.71 E-value=1.3e-08 Score=104.18 Aligned_cols=91 Identities=15% Similarity=0.059 Sum_probs=65.9
Q ss_pred CCCCCCCHHHHHHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhC-CCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcE
Q 044572 275 SSFGQANTRAFDILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAAR-KCRSVKCVEINKESQLSFEKTVSRLPKSVDGNI 353 (457)
Q Consensus 275 ~~FfQ~n~~~~~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~-~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv 353 (457)
+.||. ....++.|++.+.. .++.+|||+|||+|.+++.++++. ...+|+|||+++.+++.| .++
T Consensus 19 g~~~T-P~~l~~~~~~~~~~--~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a------------~~~ 83 (421)
T 2ih2_A 19 GRVET-PPEVVDFMVSLAEA--PRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP------------PWA 83 (421)
T ss_dssp --CCC-CHHHHHHHHHHCCC--CTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC------------TTE
T ss_pred ceEeC-CHHHHHHHHHhhcc--CCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC------------CCC
Confidence 34444 35555555443321 246799999999999999999753 346999999999998655 357
Q ss_pred EEEEccCCcCcccccCCccEEEECCCCCC
Q 044572 354 SWHNADNSIEPLSWLVGSDVLVVDPPRKG 382 (457)
Q Consensus 354 ~~~~~d~~~~~~~~~~~~D~vi~DPPR~G 382 (457)
+++++|+.+... ...||+||.|||+..
T Consensus 84 ~~~~~D~~~~~~--~~~fD~Ii~NPPy~~ 110 (421)
T 2ih2_A 84 EGILADFLLWEP--GEAFDLILGNPPYGI 110 (421)
T ss_dssp EEEESCGGGCCC--SSCEEEEEECCCCCC
T ss_pred cEEeCChhhcCc--cCCCCEEEECcCccC
Confidence 899999876532 257999999999754
No 218
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=98.71 E-value=4.5e-08 Score=99.33 Aligned_cols=107 Identities=13% Similarity=-0.003 Sum_probs=76.6
Q ss_pred CCCeEEEEcccccHHHHHHHhhC-CCCEEEEEeCCHHHHHHHHHHHhhC-----CCCCCCcEEEEEccCCcCcc----cc
Q 044572 298 YGASVTDLYAGAGVIGLSLAAAR-KCRSVKCVEINKESQLSFEKTVSRL-----PKSVDGNISWHNADNSIEPL----SW 367 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~~-~~~~V~gVE~~~~av~~A~~Na~~~-----~~~~~~nv~~~~~d~~~~~~----~~ 367 (457)
++.+|||+|||+|.+++.++... ...+|+|||+++.+++.|++|++.+ +.....+++|+++|+.+... .+
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~~ 162 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEGV 162 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCCC
T ss_pred CCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCCC
Confidence 68899999999999999999863 2359999999999999999998652 10112589999999987421 11
Q ss_pred -cCCccEEEECCCCCCc--cHHHHHHHHhcCCCCcEEEEe
Q 044572 368 -LVGSDVLVVDPPRKGL--DSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 368 -~~~~D~vi~DPPR~Gl--~~~v~~~l~~~~~~~~ivyvs 404 (457)
.+.||+|+.+-.-.-+ ...+++.+.+.-.+++.++++
T Consensus 163 ~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~ 202 (383)
T 4fsd_A 163 PDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFS 202 (383)
T ss_dssp CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEE
Confidence 2579999987652211 234556555544467776664
No 219
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.70 E-value=6.9e-08 Score=90.55 Aligned_cols=99 Identities=13% Similarity=-0.003 Sum_probs=72.7
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEEC
Q 044572 298 YGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVVD 377 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~D 377 (457)
++.+|||+|||+|.++..++.. +..+|+|||+++.+++.|+++... .+++++++|+.+... ..+.||+|++.
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~------~~~~~~~~d~~~~~~-~~~~fD~v~~~ 114 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHEH-GASYVLGLDLSEKMLARARAAGPD------TGITYERADLDKLHL-PQDSFDLAYSS 114 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTSCS------SSEEEEECCGGGCCC-CTTCEEEEEEE
T ss_pred CCCEEEEEcCcCCHHHHHHHHC-CCCeEEEEcCCHHHHHHHHHhccc------CCceEEEcChhhccC-CCCCceEEEEe
Confidence 6789999999999999999975 455999999999999999987543 368999999877532 13579999987
Q ss_pred CCCCCc--cHHHHHHHHhcCCCCcEEEEe
Q 044572 378 PPRKGL--DSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 378 PPR~Gl--~~~v~~~l~~~~~~~~ivyvs 404 (457)
..-.-+ ...+++.+.+.-.+++.++++
T Consensus 115 ~~l~~~~~~~~~l~~~~~~L~pgG~l~~~ 143 (243)
T 3bkw_A 115 LALHYVEDVARLFRTVHQALSPGGHFVFS 143 (243)
T ss_dssp SCGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccccccchHHHHHHHHHHhcCcCcEEEEE
Confidence 652211 134555555543466666664
No 220
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=98.68 E-value=5.4e-08 Score=92.31 Aligned_cols=97 Identities=11% Similarity=0.003 Sum_probs=72.5
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEEC
Q 044572 298 YGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVVD 377 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~D 377 (457)
++.+|||+|||+|.++..++......+|+|+|+++.+++.|+++. .+++++.+|+.+.. ....||+|++.
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~--------~~~~~~~~d~~~~~--~~~~fD~v~~~ 102 (259)
T 2p35_A 33 RVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRL--------PNTNFGKADLATWK--PAQKADLLYAN 102 (259)
T ss_dssp CCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHS--------TTSEEEECCTTTCC--CSSCEEEEEEE
T ss_pred CCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC--------CCcEEEECChhhcC--ccCCcCEEEEe
Confidence 678999999999999999998643458999999999999999871 36799999998754 24679999986
Q ss_pred CCCCCc--cHHHHHHHHhcCCCCcEEEEe
Q 044572 378 PPRKGL--DSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 378 PPR~Gl--~~~v~~~l~~~~~~~~ivyvs 404 (457)
-.-.-+ ...+++.+.+.-.+++.++++
T Consensus 103 ~~l~~~~~~~~~l~~~~~~L~pgG~l~~~ 131 (259)
T 2p35_A 103 AVFQWVPDHLAVLSQLMDQLESGGVLAVQ 131 (259)
T ss_dssp SCGGGSTTHHHHHHHHGGGEEEEEEEEEE
T ss_pred CchhhCCCHHHHHHHHHHhcCCCeEEEEE
Confidence 542211 134556565544466666665
No 221
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.68 E-value=6.4e-08 Score=88.72 Aligned_cols=113 Identities=12% Similarity=-0.012 Sum_probs=75.4
Q ss_pred HHHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCc
Q 044572 285 FDILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEP 364 (457)
Q Consensus 285 ~~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~ 364 (457)
...+++.+.. ..++.+|||+|||+|.+++.++...+ .+|+|||+|+.+++.|+++++..+ .+++++++|+.+..
T Consensus 11 ~~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~~~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~d~~~~~ 84 (209)
T 2p8j_A 11 LYRFLKYCNE-SNLDKTVLDCGAGGDLPPLSIFVEDG-YKTYGIEISDLQLKKAENFSRENN----FKLNISKGDIRKLP 84 (209)
T ss_dssp HHHHHHHHHH-SSSCSEEEEESCCSSSCTHHHHHHTT-CEEEEEECCHHHHHHHHHHHHHHT----CCCCEEECCTTSCC
T ss_pred HHHHHHHHhc-cCCCCEEEEECCCCCHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcC----CceEEEECchhhCC
Confidence 3344444443 34688999999999998554443333 489999999999999999987632 46889999998743
Q ss_pred ccccCCccEEEECCCCCCcc----HHHHHHHHhcCCCCcEEEEe
Q 044572 365 LSWLVGSDVLVVDPPRKGLD----SSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 365 ~~~~~~~D~vi~DPPR~Gl~----~~v~~~l~~~~~~~~ivyvs 404 (457)
. ..+.||+|++.-.-..+. ..+++.+.+.-.+++.++++
T Consensus 85 ~-~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 127 (209)
T 2p8j_A 85 F-KDESMSFVYSYGTIFHMRKNDVKEAIDEIKRVLKPGGLACIN 127 (209)
T ss_dssp S-CTTCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred C-CCCceeEEEEcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 2 135799999864422221 23444444433466666665
No 222
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.68 E-value=6.9e-08 Score=90.32 Aligned_cols=108 Identities=11% Similarity=-0.016 Sum_probs=76.1
Q ss_pred HHHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCc
Q 044572 285 FDILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEP 364 (457)
Q Consensus 285 ~~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~ 364 (457)
.+.+.+.+.+...++.+|||+|||+|.++..++.... +|+|+|+|+.+++.|+++. .+++++++|+.+..
T Consensus 27 ~~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~s~~~~~~a~~~~--------~~~~~~~~d~~~~~ 96 (239)
T 3bxo_A 27 ASDIADLVRSRTPEASSLLDVACGTGTHLEHFTKEFG--DTAGLELSEDMLTHARKRL--------PDATLHQGDMRDFR 96 (239)
T ss_dssp HHHHHHHHHHHCTTCCEEEEETCTTSHHHHHHHHHHS--EEEEEESCHHHHHHHHHHC--------TTCEEEECCTTTCC
T ss_pred HHHHHHHHHHhcCCCCeEEEecccCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhC--------CCCEEEECCHHHcc
Confidence 3445555555556788999999999999999998643 9999999999999998763 25789999998753
Q ss_pred ccccCCccEEEECC-C--CC---CccHHHHHHHHhcCCCCcEEEEe
Q 044572 365 LSWLVGSDVLVVDP-P--RK---GLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 365 ~~~~~~~D~vi~DP-P--R~---Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
. ...||+|++.- . .. .-...+++.+.+.-.+++.++++
T Consensus 97 ~--~~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (239)
T 3bxo_A 97 L--GRKFSAVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVE 140 (239)
T ss_dssp C--SSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred c--CCCCcEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 2 46799999421 1 00 00123455555544467777775
No 223
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.68 E-value=4.3e-08 Score=104.74 Aligned_cols=76 Identities=14% Similarity=0.054 Sum_probs=62.1
Q ss_pred CCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccc-cCCccEE
Q 044572 296 VPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSW-LVGSDVL 374 (457)
Q Consensus 296 ~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~-~~~~D~v 374 (457)
+..+-+|||+|||.|.++..||+. | .+|+|||.++.+|+.|+..+... +..+++|.++++++..... .+.||+|
T Consensus 64 ~~~~~~vLDvGCG~G~~~~~la~~-g-a~V~giD~~~~~i~~a~~~a~~~---~~~~~~~~~~~~~~~~~~~~~~~fD~v 138 (569)
T 4azs_A 64 LGRPLNVLDLGCAQGFFSLSLASK-G-ATIVGIDFQQENINVCRALAEEN---PDFAAEFRVGRIEEVIAALEEGEFDLA 138 (569)
T ss_dssp HTSCCEEEEETCTTSHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHHTS---TTSEEEEEECCHHHHHHHCCTTSCSEE
T ss_pred cCCCCeEEEECCCCcHHHHHHHhC-C-CEEEEECCCHHHHHHHHHHHHhc---CCCceEEEECCHHHHhhhccCCCccEE
Confidence 345679999999999999999986 3 38999999999999999998763 2347999999998764332 3579999
Q ss_pred EE
Q 044572 375 VV 376 (457)
Q Consensus 375 i~ 376 (457)
+.
T Consensus 139 ~~ 140 (569)
T 4azs_A 139 IG 140 (569)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 224
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.67 E-value=4.4e-08 Score=93.47 Aligned_cols=89 Identities=17% Similarity=0.119 Sum_probs=72.2
Q ss_pred HHHHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcC
Q 044572 284 AFDILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIE 363 (457)
Q Consensus 284 ~~~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~ 363 (457)
..+.+|..+.+.+....+|||||||+|.|++.++...+..+|+|+|+|+.+++.+++|+..++ .+.++...|....
T Consensus 118 ~lD~fY~~i~~~i~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g----~~~~~~v~D~~~~ 193 (281)
T 3lcv_B 118 HLDEFYRELFRHLPRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLN----VPHRTNVADLLED 193 (281)
T ss_dssp GHHHHHHHHGGGSCCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTT----CCEEEEECCTTTS
T ss_pred hHHHHHHHHHhccCCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcC----CCceEEEeeeccc
Confidence 346678888887766789999999999999999876667899999999999999999998843 2478888887654
Q ss_pred cccccCCccEEEECC
Q 044572 364 PLSWLVGSDVLVVDP 378 (457)
Q Consensus 364 ~~~~~~~~D~vi~DP 378 (457)
.. ...+|++++.=
T Consensus 194 ~p--~~~~DvaL~lk 206 (281)
T 3lcv_B 194 RL--DEPADVTLLLK 206 (281)
T ss_dssp CC--CSCCSEEEETT
T ss_pred CC--CCCcchHHHHH
Confidence 32 35799998754
No 225
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.67 E-value=1.3e-07 Score=92.97 Aligned_cols=107 Identities=14% Similarity=0.020 Sum_probs=74.4
Q ss_pred CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCC----CCCCcEEEEEccCCcCc----cc-c
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPK----SVDGNISWHNADNSIEP----LS-W 367 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~----~~~~nv~~~~~d~~~~~----~~-~ 367 (457)
.++.+|||+|||+|.++..++.. +..+|+|+|+++.+++.|+++....+. ....+++++++|+.+.. .. .
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 111 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKG-RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDP 111 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSST
T ss_pred CCCCEEEEECCCCcHHHHHHHhc-CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccC
Confidence 36789999999999999999873 456999999999999999998764210 02357999999998753 11 1
Q ss_pred cCCccEEEECCCCCCc--c----HHHHHHHHhcCCCCcEEEEe
Q 044572 368 LVGSDVLVVDPPRKGL--D----SSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 368 ~~~~D~vi~DPPR~Gl--~----~~v~~~l~~~~~~~~ivyvs 404 (457)
.+.||+|++.-.-.-+ + ..+++.+.+.-.++++++++
T Consensus 112 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (313)
T 3bgv_A 112 QMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGT 154 (313)
T ss_dssp TCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred CCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEe
Confidence 2479999985432111 1 24555555544467777775
No 226
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.67 E-value=1.1e-07 Score=100.74 Aligned_cols=105 Identities=18% Similarity=0.098 Sum_probs=79.1
Q ss_pred CCCCCCCCHHHHHHHHHHHHhhC--CCCCeEEEEcccccHHHHHHHhhC---CCCEEEEEeCCHHHHHHHHHHHhhCCCC
Q 044572 274 PSSFGQANTRAFDILLRKLQKYV--PYGASVTDLYAGAGVIGLSLAAAR---KCRSVKCVEINKESQLSFEKTVSRLPKS 348 (457)
Q Consensus 274 ~~~FfQ~n~~~~~~l~~~i~~~~--~~~~~vLDl~cG~G~~sl~lA~~~---~~~~V~gVE~~~~av~~A~~Na~~~~~~ 348 (457)
.+.||. .+...+.|++.+.... ..+.+|+|.+||||+|.+.++... +..+++|+|+++.+++.|+.|+...+
T Consensus 196 ~G~fyT-P~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~g-- 272 (542)
T 3lkd_A 196 AGEFYT-PQPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHG-- 272 (542)
T ss_dssp CSSCCC-CHHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTT--
T ss_pred CCeecc-cHHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcC--
Confidence 356665 4677777777665322 257899999999999999888752 24589999999999999999987732
Q ss_pred CC-CcEEEEEccCCcC--cccccCCccEEEECCCCC
Q 044572 349 VD-GNISWHNADNSIE--PLSWLVGSDVLVVDPPRK 381 (457)
Q Consensus 349 ~~-~nv~~~~~d~~~~--~~~~~~~~D~vi~DPPR~ 381 (457)
.. +++.+.++|.... .......||+||.|||+.
T Consensus 273 i~~~~~~I~~gDtL~~d~p~~~~~~fD~IvaNPPf~ 308 (542)
T 3lkd_A 273 VPIENQFLHNADTLDEDWPTQEPTNFDGVLMNPPYS 308 (542)
T ss_dssp CCGGGEEEEESCTTTSCSCCSSCCCBSEEEECCCTT
T ss_pred CCcCccceEecceecccccccccccccEEEecCCcC
Confidence 21 4788999998754 222235799999999964
No 227
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=98.66 E-value=1.2e-07 Score=83.58 Aligned_cols=112 Identities=11% Similarity=0.005 Sum_probs=75.4
Q ss_pred CCCCCeEEEEcccccHHHHHHHhhCC-CCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCc-----cc-c-
Q 044572 296 VPYGASVTDLYAGAGVIGLSLAAARK-CRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEP-----LS-W- 367 (457)
Q Consensus 296 ~~~~~~vLDl~cG~G~~sl~lA~~~~-~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~-----~~-~- 367 (457)
+.++.+|||+|||+|.++..+++..+ ..+|+|+|+++ +++. .+++++++|+.+.. .. .
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~-------------~~~~~~~~d~~~~~~~~~~~~~~~ 85 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI-------------VGVDFLQGDFRDELVMKALLERVG 85 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC-------------TTEEEEESCTTSHHHHHHHHHHHT
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc-------------CcEEEEEcccccchhhhhhhccCC
Confidence 34788999999999999999998632 36999999999 6421 46899999997642 00 1
Q ss_pred cCCccEEEECCCCCC--cc-----------HHHHHHHHhcCCCCcEEEEeccCCCCCchhchhhHHHHHHHh
Q 044572 368 LVGSDVLVVDPPRKG--LD-----------SSLVHALQSIGSAERKAKSLSESSSSMVKEEKRPWILRAKEA 426 (457)
Q Consensus 368 ~~~~D~vi~DPPR~G--l~-----------~~v~~~l~~~~~~~~ivyvs~~~~~c~~~~~~~~~~~~~~~~ 426 (457)
.+.||+|++|+|... .. ..+++.+.++-.+++.++++ .........+.......
T Consensus 86 ~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~-----~~~~~~~~~~~~~~~~~ 152 (180)
T 1ej0_A 86 DSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVK-----VFQGEGFDEYLREIRSL 152 (180)
T ss_dssp TCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE-----EESSTTHHHHHHHHHHH
T ss_pred CCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEE-----EecCCcHHHHHHHHHHh
Confidence 257999999998543 22 34555555543466666665 33333444555555543
No 228
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.64 E-value=2.9e-08 Score=95.36 Aligned_cols=105 Identities=11% Similarity=0.119 Sum_probs=70.0
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCC--------------------------CC
Q 044572 298 YGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSV--------------------------DG 351 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~--------------------------~~ 351 (457)
++.+|||+|||+|.+++.++. .++.+|+|+|+|+.|++.|+++++...... ..
T Consensus 55 ~g~~vLDiGCG~G~~~~~~~~-~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (263)
T 2a14_A 55 QGDTLIDIGSGPTIYQVLAAC-DSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRA 133 (263)
T ss_dssp CEEEEEESSCTTCCGGGTTGG-GTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHH
T ss_pred CCceEEEeCCCccHHHHHHHH-hhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHh
Confidence 578999999999998887775 356689999999999999999876521010 01
Q ss_pred cEE-EEEccCCcCcc-c--ccCCccEEEEC------CC-CCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 352 NIS-WHNADNSIEPL-S--WLVGSDVLVVD------PP-RKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 352 nv~-~~~~d~~~~~~-~--~~~~~D~vi~D------PP-R~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
++. ++++|+.+... . ....||+|+.. +| .... ..+++.+.++-++++.+.++
T Consensus 134 ~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~-~~~l~~i~r~LKPGG~li~~ 196 (263)
T 2a14_A 134 AVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAY-RAALCNLASLLKPGGHLVTT 196 (263)
T ss_dssp HEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHH-HHHHHHHHTTEEEEEEEEEE
T ss_pred hhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHH-HHHHHHHHHHcCCCcEEEEE
Confidence 344 88999887321 1 13579999884 22 1111 13455555544567766665
No 229
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.63 E-value=4.8e-08 Score=93.47 Aligned_cols=96 Identities=17% Similarity=0.075 Sum_probs=67.8
Q ss_pred CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEE
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVV 376 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~ 376 (457)
.++.+|||+|||+|.++..++.. ..+|+|||+|+.+++.|+++ .|++|+.+|+.+... ..+.||+|++
T Consensus 33 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~---------~~~~~~~~d~~~~~~-~~~~fD~v~~ 100 (261)
T 3ege_A 33 PKGSVIADIGAGTGGYSVALANQ--GLFVYAVEPSIVMRQQAVVH---------PQVEWFTGYAENLAL-PDKSVDGVIS 100 (261)
T ss_dssp CTTCEEEEETCTTSHHHHHHHTT--TCEEEEECSCHHHHHSSCCC---------TTEEEECCCTTSCCS-CTTCBSEEEE
T ss_pred CCCCEEEEEcCcccHHHHHHHhC--CCEEEEEeCCHHHHHHHHhc---------cCCEEEECchhhCCC-CCCCEeEEEE
Confidence 46889999999999999999974 35999999999998766532 178999999987532 1367999988
Q ss_pred CCCCCCc--cHHHHHHHHhcCCCCcEEEEe
Q 044572 377 DPPRKGL--DSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 377 DPPR~Gl--~~~v~~~l~~~~~~~~ivyvs 404 (457)
.-.-.-+ ...+++.+.+.-..+.++.++
T Consensus 101 ~~~l~~~~~~~~~l~~~~~~LkgG~~~~~~ 130 (261)
T 3ege_A 101 ILAIHHFSHLEKSFQEMQRIIRDGTIVLLT 130 (261)
T ss_dssp ESCGGGCSSHHHHHHHHHHHBCSSCEEEEE
T ss_pred cchHhhccCHHHHHHHHHHHhCCcEEEEEE
Confidence 6542111 124555555443445566665
No 230
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.62 E-value=1.2e-07 Score=90.51 Aligned_cols=106 Identities=15% Similarity=0.061 Sum_probs=74.9
Q ss_pred HHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcc
Q 044572 286 DILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPL 365 (457)
Q Consensus 286 ~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~ 365 (457)
+.+.+.+.+++.++.+|||+|||+|.++..++.. + .+|+|||+|+.+++.|+++.. .+ ++++|+.+...
T Consensus 42 ~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~-~-~~v~gvD~s~~~l~~a~~~~~-------~~--~~~~d~~~~~~ 110 (260)
T 2avn_A 42 RLIGSFLEEYLKNPCRVLDLGGGTGKWSLFLQER-G-FEVVLVDPSKEMLEVAREKGV-------KN--VVEAKAEDLPF 110 (260)
T ss_dssp HHHHHHHHHHCCSCCEEEEETCTTCHHHHHHHTT-T-CEEEEEESCHHHHHHHHHHTC-------SC--EEECCTTSCCS
T ss_pred HHHHHHHHHhcCCCCeEEEeCCCcCHHHHHHHHc-C-CeEEEEeCCHHHHHHHHhhcC-------CC--EEECcHHHCCC
Confidence 4444555555557889999999999999999975 3 489999999999999998743 12 78899876532
Q ss_pred cccCCccEEEECCCC----CCccHHHHHHHHhcCCCCcEEEEe
Q 044572 366 SWLVGSDVLVVDPPR----KGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 366 ~~~~~~D~vi~DPPR----~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
..+.||+|++...- .. ...+++.+.+.-.+++.++++
T Consensus 111 -~~~~fD~v~~~~~~~~~~~~-~~~~l~~~~~~LkpgG~l~~~ 151 (260)
T 2avn_A 111 -PSGAFEAVLALGDVLSYVEN-KDKAFSEIRRVLVPDGLLIAT 151 (260)
T ss_dssp -CTTCEEEEEECSSHHHHCSC-HHHHHHHHHHHEEEEEEEEEE
T ss_pred -CCCCEEEEEEcchhhhcccc-HHHHHHHHHHHcCCCeEEEEE
Confidence 13579999986431 11 234566665544466666665
No 231
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.61 E-value=1.7e-07 Score=101.87 Aligned_cols=106 Identities=14% Similarity=0.060 Sum_probs=72.0
Q ss_pred CCCCCCCHHHHHHHHHHHHhhC----CCCCeEEEEcccccHHHHHHHhhCC---CCEEEEEeCCHHHHHHH--HHHHhhC
Q 044572 275 SSFGQANTRAFDILLRKLQKYV----PYGASVTDLYAGAGVIGLSLAAARK---CRSVKCVEINKESQLSF--EKTVSRL 345 (457)
Q Consensus 275 ~~FfQ~n~~~~~~l~~~i~~~~----~~~~~vLDl~cG~G~~sl~lA~~~~---~~~V~gVE~~~~av~~A--~~Na~~~ 345 (457)
+.|| ..+..+..|++.+...+ .++.+|||.+||+|+|.+.++...+ ..+++|+|+++.+++.| +.|+..+
T Consensus 295 GqFY-TP~eLA~lMVeLA~ill~~~l~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN 373 (878)
T 3s1s_A 295 GVVP-TDIELGKVLSIISQHILGRPLTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFP 373 (878)
T ss_dssp BSSS-CCHHHHHHHHHHHHHHHCSCCCTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTST
T ss_pred ceEc-CCHHHHHHHHHHHhhhccccCCCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHh
Confidence 4455 45777777777632222 2578999999999999999997542 24799999999999999 7787642
Q ss_pred CC-CCCCcEEEEEccCCcCcccccCCccEEEECCCCC
Q 044572 346 PK-SVDGNISWHNADNSIEPLSWLVGSDVLVVDPPRK 381 (457)
Q Consensus 346 ~~-~~~~nv~~~~~d~~~~~~~~~~~~D~vi~DPPR~ 381 (457)
.. .+..+..+...|...........||+||.|||+.
T Consensus 374 ~LlhGi~~~~I~~dD~L~~~~~~~~kFDVVIgNPPYg 410 (878)
T 3s1s_A 374 QLVSSNNAPTITGEDVCSLNPEDFANVSVVVMNPPYV 410 (878)
T ss_dssp TTCBTTBCCEEECCCGGGCCGGGGTTEEEEEECCBCC
T ss_pred hhhcCCCcceEEecchhcccccccCCCCEEEECCCcc
Confidence 11 1222334555555442122236799999999984
No 232
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.61 E-value=2.7e-07 Score=83.71 Aligned_cols=122 Identities=17% Similarity=0.060 Sum_probs=75.3
Q ss_pred HHHHHHHHh--hCCCCCeEEEEcccccHHHHHHHhhCCC---------CEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEE
Q 044572 286 DILLRKLQK--YVPYGASVTDLYAGAGVIGLSLAAARKC---------RSVKCVEINKESQLSFEKTVSRLPKSVDGNIS 354 (457)
Q Consensus 286 ~~l~~~i~~--~~~~~~~vLDl~cG~G~~sl~lA~~~~~---------~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~ 354 (457)
.+|++.... .+.++.+|||+|||+|.+++.+++..+. .+|+|||+++.+ ...+++
T Consensus 8 ~kl~~l~~~~~~~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~--------------~~~~~~ 73 (196)
T 2nyu_A 8 FKLLEVNERHQILRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF--------------PLEGAT 73 (196)
T ss_dssp HHHHHHHHHHCCCCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC--------------CCTTCE
T ss_pred HHHHHHHHhcCCCCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc--------------cCCCCe
Confidence 344444333 2457899999999999999999987543 689999999832 124678
Q ss_pred EE-EccCCcCccc------c-cCCccEEEECCCC--CCcc-----------HHHHHHHHhcCCCCcEEEEeccCCCCCch
Q 044572 355 WH-NADNSIEPLS------W-LVGSDVLVVDPPR--KGLD-----------SSLVHALQSIGSAERKAKSLSESSSSMVK 413 (457)
Q Consensus 355 ~~-~~d~~~~~~~------~-~~~~D~vi~DPPR--~Gl~-----------~~v~~~l~~~~~~~~ivyvs~~~~~c~~~ 413 (457)
++ .+|+...... . ...||+|+.|.+- .|.. ..+++.+.++-.+++.+++. ....
T Consensus 74 ~~~~~d~~~~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~-----~~~~ 148 (196)
T 2nyu_A 74 FLCPADVTDPRTSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCK-----TWAG 148 (196)
T ss_dssp EECSCCTTSHHHHHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE-----ECCS
T ss_pred EEEeccCCCHHHHHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEE-----ecCC
Confidence 89 8987653210 1 1479999999842 2322 13344444332355555554 2323
Q ss_pred hchhhHHHHHHHh
Q 044572 414 EEKRPWILRAKEA 426 (457)
Q Consensus 414 ~~~~~~~~~~~~~ 426 (457)
.....+...+...
T Consensus 149 ~~~~~~~~~l~~~ 161 (196)
T 2nyu_A 149 SQSRRLQRRLTEE 161 (196)
T ss_dssp GGGHHHHHHHHHH
T ss_pred ccHHHHHHHHHHH
Confidence 3345565555544
No 233
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.61 E-value=8.1e-08 Score=90.44 Aligned_cols=96 Identities=16% Similarity=-0.074 Sum_probs=67.3
Q ss_pred CCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccc-cCCccEE
Q 044572 296 VPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSW-LVGSDVL 374 (457)
Q Consensus 296 ~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~-~~~~D~v 374 (457)
+.++.+|||+|||+|.++..++.. + .+|+|||+|+.+++.|+++ ++++.+|+.+.+..+ .+.||+|
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l~~~-~-~~v~gvD~s~~~~~~a~~~-----------~~~~~~d~~~~~~~~~~~~fD~i 105 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELCKEE-G-IESIGVDINEDMIKFCEGK-----------FNVVKSDAIEYLKSLPDKYLDGV 105 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHHHHH-T-CCEEEECSCHHHHHHHHTT-----------SEEECSCHHHHHHTSCTTCBSEE
T ss_pred hcCCCeEEEEeCCCCHHHHHHHhC-C-CcEEEEECCHHHHHHHHhh-----------cceeeccHHHHhhhcCCCCeeEE
Confidence 346789999999999999999986 3 3799999999999988754 478888887643222 3679999
Q ss_pred EECCCCCCcc----HHHHHHHHhcCCCCcEEEEe
Q 044572 375 VVDPPRKGLD----SSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 375 i~DPPR~Gl~----~~v~~~l~~~~~~~~ivyvs 404 (457)
++.---.-+. ..+++.+.+.-.+++.++++
T Consensus 106 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 139 (240)
T 3dli_A 106 MISHFVEHLDPERLFELLSLCYSKMKYSSYIVIE 139 (240)
T ss_dssp EEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEE
T ss_pred EECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEE
Confidence 9843211111 34566665544466666655
No 234
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.59 E-value=4.1e-07 Score=82.94 Aligned_cols=79 Identities=11% Similarity=0.089 Sum_probs=57.6
Q ss_pred HHHHHHHhh--CCCCCeEEEEcccccHHHHHHHhhCC--CCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCc
Q 044572 287 ILLRKLQKY--VPYGASVTDLYAGAGVIGLSLAAARK--CRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSI 362 (457)
Q Consensus 287 ~l~~~i~~~--~~~~~~vLDl~cG~G~~sl~lA~~~~--~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~ 362 (457)
+|++....+ +.++.+|||+|||+|.+++.++...+ ..+|+|||+++.+ . ..+++++++|+.+
T Consensus 9 kl~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~---------~-----~~~v~~~~~d~~~ 74 (201)
T 2plw_A 9 KLIELDNKYLFLKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD---------P-----IPNVYFIQGEIGK 74 (201)
T ss_dssp HHHHHHHHHCCCCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC---------C-----CTTCEEEECCTTT
T ss_pred HHHHHHHHcCCCCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC---------C-----CCCceEEEccccc
Confidence 444443332 45788999999999999999998754 3689999999831 1 2468999999876
Q ss_pred Ccc-----------------------cc-cCCccEEEECCC
Q 044572 363 EPL-----------------------SW-LVGSDVLVVDPP 379 (457)
Q Consensus 363 ~~~-----------------------~~-~~~~D~vi~DPP 379 (457)
... .+ ...||+|+.|+.
T Consensus 75 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~ 115 (201)
T 2plw_A 75 DNMNNIKNINYIDNMNNNSVDYKLKEILQDKKIDIILSDAA 115 (201)
T ss_dssp TSSCCC-----------CHHHHHHHHHHTTCCEEEEEECCC
T ss_pred hhhhhhccccccccccchhhHHHHHhhcCCCcccEEEeCCC
Confidence 530 01 247999999975
No 235
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.59 E-value=7.4e-08 Score=93.37 Aligned_cols=105 Identities=14% Similarity=-0.044 Sum_probs=73.5
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCC-CCCcEEEEEccCCcCccc--ccCCccEE
Q 044572 298 YGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKS-VDGNISWHNADNSIEPLS--WLVGSDVL 374 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~-~~~nv~~~~~d~~~~~~~--~~~~~D~v 374 (457)
++.+|||+|||+|.+++.++.. ++ +|+|||+|+.+++.|++|+...... ...++.+..+|+.+.... ..+.||+|
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~-~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V 134 (293)
T 3thr_A 57 GCHRVLDVACGTGVDSIMLVEE-GF-SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAV 134 (293)
T ss_dssp TCCEEEETTCTTSHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHC-CC-eEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeEEE
Confidence 5789999999999999999986 33 9999999999999999987542111 124688999998764311 13579999
Q ss_pred EECC-CCC---C------ccHHHHHHHHhcCCCCcEEEEe
Q 044572 375 VVDP-PRK---G------LDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 375 i~DP-PR~---G------l~~~v~~~l~~~~~~~~ivyvs 404 (457)
++.. --. . ....+++.+.++..+++.++++
T Consensus 135 ~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (293)
T 3thr_A 135 ICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVID 174 (293)
T ss_dssp EECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred EEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 9862 110 0 0234566665544467777765
No 236
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.59 E-value=3e-07 Score=84.91 Aligned_cols=96 Identities=15% Similarity=-0.010 Sum_probs=68.9
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcC---cccccCCccEE
Q 044572 298 YGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIE---PLSWLVGSDVL 374 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~---~~~~~~~~D~v 374 (457)
.+.+|||+|||+|.++..++.. + .+|+|+|+++.+++.|+++ .++.++.+|+.+. .......||+|
T Consensus 52 ~~~~vLdiG~G~G~~~~~l~~~-~-~~v~~vD~s~~~~~~a~~~---------~~~~~~~~~~~~~~~~~~~~~~~fD~v 120 (227)
T 3e8s_A 52 QPERVLDLGCGEGWLLRALADR-G-IEAVGVDGDRTLVDAARAA---------GAGEVHLASYAQLAEAKVPVGKDYDLI 120 (227)
T ss_dssp CCSEEEEETCTTCHHHHHHHTT-T-CEEEEEESCHHHHHHHHHT---------CSSCEEECCHHHHHTTCSCCCCCEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHC-C-CEEEEEcCCHHHHHHHHHh---------cccccchhhHHhhcccccccCCCccEE
Confidence 5789999999999999999976 3 4899999999999999876 1346788887654 11112459999
Q ss_pred EECCCCC-CccHHHHHHHHhcCCCCcEEEEe
Q 044572 375 VVDPPRK-GLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 375 i~DPPR~-Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
++...-. .-...+++.+.+...+++.++++
T Consensus 121 ~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~ 151 (227)
T 3e8s_A 121 CANFALLHQDIIELLSAMRTLLVPGGALVIQ 151 (227)
T ss_dssp EEESCCCSSCCHHHHHHHHHTEEEEEEEEEE
T ss_pred EECchhhhhhHHHHHHHHHHHhCCCeEEEEE
Confidence 9865532 11134666666554577777775
No 237
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.58 E-value=2.2e-07 Score=89.56 Aligned_cols=96 Identities=10% Similarity=0.020 Sum_probs=70.6
Q ss_pred CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEE
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVV 376 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~ 376 (457)
.++.+|||+|||+|.++..++.. ..+|+|+|+|+.+++.|+++. .+++++.+|+.+... .+.||+|++
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~--------~~~~~~~~d~~~~~~--~~~fD~v~~ 123 (279)
T 3ccf_A 56 QPGEFILDLGCGTGQLTEKIAQS--GAEVLGTDNAATMIEKARQNY--------PHLHFDVADARNFRV--DKPLDAVFS 123 (279)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHC--------TTSCEEECCTTTCCC--SSCEEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHhhC--------CCCEEEECChhhCCc--CCCcCEEEE
Confidence 36789999999999999999974 359999999999999998764 357899999987542 467999998
Q ss_pred CCCCCC--ccHHHHHHHHhcCCCCcEEEEe
Q 044572 377 DPPRKG--LDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 377 DPPR~G--l~~~v~~~l~~~~~~~~ivyvs 404 (457)
.-.-.- -...+++.+.+.-.+++.++++
T Consensus 124 ~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~ 153 (279)
T 3ccf_A 124 NAMLHWVKEPEAAIASIHQALKSGGRFVAE 153 (279)
T ss_dssp ESCGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred cchhhhCcCHHHHHHHHHHhcCCCcEEEEE
Confidence 654211 1124555555543466666665
No 238
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.57 E-value=3e-07 Score=86.81 Aligned_cols=83 Identities=14% Similarity=0.065 Sum_probs=67.0
Q ss_pred HHHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCc
Q 044572 285 FDILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEP 364 (457)
Q Consensus 285 ~~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~ 364 (457)
.+.+|..+.++ ....+|||+|||+|.|++.+. +..+++|+|+|+.+++.+++|+..++ .+.++..+|.....
T Consensus 93 ld~fY~~i~~~-~~p~~VLDlGCG~gpLal~~~---~~~~y~a~DId~~~i~~ar~~~~~~g----~~~~~~v~D~~~~~ 164 (253)
T 3frh_A 93 LDTLYDFIFSA-ETPRRVLDIACGLNPLALYER---GIASVWGCDIHQGLGDVITPFAREKD----WDFTFALQDVLCAP 164 (253)
T ss_dssp HHHHHHHHTSS-CCCSEEEEETCTTTHHHHHHT---TCSEEEEEESBHHHHHHHHHHHHHTT----CEEEEEECCTTTSC
T ss_pred HHHHHHHHhcC-CCCCeEEEecCCccHHHHHhc---cCCeEEEEeCCHHHHHHHHHHHHhcC----CCceEEEeecccCC
Confidence 34566666666 567899999999999999987 35699999999999999999998732 57789999987654
Q ss_pred ccccCCccEEEEC
Q 044572 365 LSWLVGSDVLVVD 377 (457)
Q Consensus 365 ~~~~~~~D~vi~D 377 (457)
. ...+|+|++.
T Consensus 165 ~--~~~~DvvLll 175 (253)
T 3frh_A 165 P--AEAGDLALIF 175 (253)
T ss_dssp C--CCBCSEEEEE
T ss_pred C--CCCcchHHHH
Confidence 3 3579999775
No 239
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.56 E-value=1.4e-07 Score=90.88 Aligned_cols=99 Identities=9% Similarity=-0.018 Sum_probs=74.5
Q ss_pred CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCC-CCCCcEEEEEccCCcCcccccCCccEEE
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPK-SVDGNISWHNADNSIEPLSWLVGSDVLV 375 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~-~~~~nv~~~~~d~~~~~~~~~~~~D~vi 375 (457)
....+|||+|||+|.++..+++. + .+|++||+++++++.|++++..... ....+++++.+|+.+++ +.||+||
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~----~~fD~Ii 144 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKY-D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI----KKYDLIF 144 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTS-S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC----CCEEEEE
T ss_pred CCCCEEEEEeCCcCHHHHHHHhC-C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH----hhCCEEE
Confidence 35689999999999999999986 6 8999999999999999987532100 01357999999998764 6799999
Q ss_pred ECCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 376 VDPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 376 ~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
+|.+-. ..+.+.+.+.-.+++++.+.
T Consensus 145 ~d~~dp---~~~~~~~~~~L~pgG~lv~~ 170 (262)
T 2cmg_A 145 CLQEPD---IHRIDGLKRMLKEDGVFISV 170 (262)
T ss_dssp ESSCCC---HHHHHHHHTTEEEEEEEEEE
T ss_pred ECCCCh---HHHHHHHHHhcCCCcEEEEE
Confidence 997532 23566665544467776664
No 240
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.53 E-value=2.7e-07 Score=88.28 Aligned_cols=107 Identities=12% Similarity=0.066 Sum_probs=74.1
Q ss_pred HHHHHHHHHHhhC-CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCc
Q 044572 284 AFDILLRKLQKYV-PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSI 362 (457)
Q Consensus 284 ~~~~l~~~i~~~~-~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~ 362 (457)
..+.+.+.+...+ .++.+|||+|||+|.++..++...+..+|+|+|+++.+++.|+++. .++.++.+|+.+
T Consensus 70 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~--------~~~~~~~~d~~~ 141 (269)
T 1p91_A 70 LRDAIVAQLRERLDDKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY--------PQVTFCVASSHR 141 (269)
T ss_dssp HHHHHHHHHHHHSCTTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC--------TTSEEEECCTTS
T ss_pred HHHHHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC--------CCcEEEEcchhh
Confidence 3445555555554 4688999999999999999998643358999999999999998763 246899999876
Q ss_pred CcccccCCccEEEECCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 363 EPLSWLVGSDVLVVDPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 363 ~~~~~~~~~D~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
... ..+.||+|+....... +.+..+.++ +++.+++.
T Consensus 142 ~~~-~~~~fD~v~~~~~~~~----l~~~~~~L~-pgG~l~~~ 177 (269)
T 1p91_A 142 LPF-SDTSMDAIIRIYAPCK----AEELARVVK-PGGWVITA 177 (269)
T ss_dssp CSB-CTTCEEEEEEESCCCC----HHHHHHHEE-EEEEEEEE
T ss_pred CCC-CCCceeEEEEeCChhh----HHHHHHhcC-CCcEEEEE
Confidence 432 1357999887544221 233333455 55555554
No 241
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=98.53 E-value=1.1e-07 Score=96.44 Aligned_cols=93 Identities=18% Similarity=0.177 Sum_probs=69.7
Q ss_pred CeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccc-------cCCcc
Q 044572 300 ASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSW-------LVGSD 372 (457)
Q Consensus 300 ~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~-------~~~~D 372 (457)
-+++|||||+|.+++.+.. +|+..|.+||+++.|++..+.|.. +..++++|+.+..... ...+|
T Consensus 3 ~~vidLFsG~GGlslG~~~-aG~~~v~avE~d~~a~~t~~~N~~--------~~~~~~~DI~~~~~~~~~~~~~~~~~~D 73 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAAR-AGFDVKMAVEIDQHAINTHAINFP--------RSLHVQEDVSLLNAEIIKGFFKNDMPID 73 (376)
T ss_dssp CEEEEETCTTSHHHHHHHH-HTCEEEEEECSCHHHHHHHHHHCT--------TSEEECCCGGGCCHHHHHHHHCSCCCCC
T ss_pred CeEEEEccCcCHHHHHHHH-CCCcEEEEEeCCHHHHHHHHHhCC--------CCceEecChhhcCHHHHHhhcccCCCee
Confidence 4799999999999999887 467789999999999999988843 3467889998764321 24699
Q ss_pred EEEECCCCCC---------------ccHHHHHHHHhcCCCCcEEE
Q 044572 373 VLVVDPPRKG---------------LDSSLVHALQSIGSAERKAK 402 (457)
Q Consensus 373 ~vi~DPPR~G---------------l~~~v~~~l~~~~~~~~ivy 402 (457)
+|+.+||-.+ |-.++++.+..++ |+-+++
T Consensus 74 ~i~ggpPCQ~fS~ag~~~~~d~r~~L~~~~~~~v~~~~-P~~~v~ 117 (376)
T 3g7u_A 74 GIIGGPPCQGFSSIGKGNPDDSRNQLYMHFYRLVSELQ-PLFFLA 117 (376)
T ss_dssp EEEECCCCCTTC-------CHHHHHHHHHHHHHHHHHC-CSEEEE
T ss_pred EEEecCCCCCcccccCCCCCCchHHHHHHHHHHHHHhC-CCEEEE
Confidence 9999999322 2234566777775 555555
No 242
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.52 E-value=1.9e-07 Score=82.84 Aligned_cols=94 Identities=10% Similarity=0.081 Sum_probs=68.0
Q ss_pred CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEE
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVV 376 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~ 376 (457)
.++.+|||+|||+|.++..++... .+|+|+|+++.+++.|+++ . .+++++.+| ... ..+.||+|++
T Consensus 16 ~~~~~vLDiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~--~------~~v~~~~~d-~~~---~~~~~D~v~~ 81 (170)
T 3i9f_A 16 GKKGVIVDYGCGNGFYCKYLLEFA--TKLYCIDINVIALKEVKEK--F------DSVITLSDP-KEI---PDNSVDFILF 81 (170)
T ss_dssp SCCEEEEEETCTTCTTHHHHHTTE--EEEEEECSCHHHHHHHHHH--C------TTSEEESSG-GGS---CTTCEEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhhc--CeEEEEeCCHHHHHHHHHh--C------CCcEEEeCC-CCC---CCCceEEEEE
Confidence 467899999999999999999754 3999999999999999987 1 368999998 221 2357999998
Q ss_pred CCCCCCc--cHHHHHHHHhcCCCCcEEEEe
Q 044572 377 DPPRKGL--DSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 377 DPPR~Gl--~~~v~~~l~~~~~~~~ivyvs 404 (457)
.-.-.-+ ...+++.+.+.-.+++.+++.
T Consensus 82 ~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~ 111 (170)
T 3i9f_A 82 ANSFHDMDDKQHVISEVKRILKDDGRVIII 111 (170)
T ss_dssp ESCSTTCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccchhcccCHHHHHHHHHHhcCCCCEEEEE
Confidence 7653322 124555555443355655554
No 243
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=98.52 E-value=1.3e-07 Score=94.66 Aligned_cols=71 Identities=17% Similarity=0.278 Sum_probs=57.5
Q ss_pred CeEEEEcccccHHHHHHHhhCC--CCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccC--CccEEE
Q 044572 300 ASVTDLYAGAGVIGLSLAAARK--CRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLV--GSDVLV 375 (457)
Q Consensus 300 ~~vLDl~cG~G~~sl~lA~~~~--~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~--~~D~vi 375 (457)
.+|+|||||+|++++.+... | ++.|+++|+++.|++..+.|... ..++++|+.+....... .+|+|+
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~-G~~~~~v~~~E~d~~a~~~~~~N~~~--------~~~~~~Di~~~~~~~~~~~~~D~l~ 73 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRES-CIPAQVVAAIDVNTVANEVYKYNFPH--------TQLLAKTIEGITLEEFDRLSFDMIL 73 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHH-TCSEEEEEEECCCHHHHHHHHHHCTT--------SCEECSCGGGCCHHHHHHHCCSEEE
T ss_pred CeEEEeCcCccHHHHHHHHC-CCCceEEEEEeCCHHHHHHHHHhccc--------cccccCCHHHccHhHcCcCCcCEEE
Confidence 47999999999999999874 4 46899999999999999998642 24678998876432221 689999
Q ss_pred ECCC
Q 044572 376 VDPP 379 (457)
Q Consensus 376 ~DPP 379 (457)
.+||
T Consensus 74 ~gpP 77 (343)
T 1g55_A 74 MSPP 77 (343)
T ss_dssp ECCC
T ss_pred EcCC
Confidence 9999
No 244
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.52 E-value=4e-07 Score=88.22 Aligned_cols=128 Identities=14% Similarity=0.089 Sum_probs=83.7
Q ss_pred ECCCCCCCCCHHHHHHHHHHHHhhCCCCCeEEEEcccccH----HHHHHHhhCC----CCEEEEEeCCHHHHHHHHHHHh
Q 044572 272 LAPSSFGQANTRAFDILLRKLQKYVPYGASVTDLYAGAGV----IGLSLAAARK----CRSVKCVEINKESQLSFEKTVS 343 (457)
Q Consensus 272 i~~~~FfQ~n~~~~~~l~~~i~~~~~~~~~vLDl~cG~G~----~sl~lA~~~~----~~~V~gVE~~~~av~~A~~Na~ 343 (457)
+..+.||. ++...+.+.+.++.. .+..+|||+|||||. +++.++...+ ..+|+|+|+|++|++.|++++-
T Consensus 81 ~~~t~FfR-d~~~f~~l~~~llp~-~~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y 158 (274)
T 1af7_A 81 TNLTAFFR-EAHHFPILAEHARRR-HGEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIY 158 (274)
T ss_dssp CCCCCTTT-TTTHHHHHHHHHHHS-CSCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEE
T ss_pred hcCccccC-ChHHHHHHHHHccCC-CCCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCC
Confidence 34578887 455666666555433 235689999999998 7777776422 1389999999999999999851
Q ss_pred h-------------------CCC-CC--------CCcEEEEEccCCcCcccccCCccEEEECCCCCCc---c----HHHH
Q 044572 344 R-------------------LPK-SV--------DGNISWHNADNSIEPLSWLVGSDVLVVDPPRKGL---D----SSLV 388 (457)
Q Consensus 344 ~-------------------~~~-~~--------~~nv~~~~~d~~~~~~~~~~~~D~vi~DPPR~Gl---~----~~v~ 388 (457)
. ... ++ ..+|+|.++|+.+......+.||+|++ |.-+ + ..++
T Consensus 159 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~c---rnvliyf~~~~~~~vl 235 (274)
T 1af7_A 159 RLSELKTLSPQQLQRYFMRGTGPHEGLVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFC---RNVMIYFDKTTQEDIL 235 (274)
T ss_dssp EGGGGTTSCHHHHHHHEEECCTTSCSEEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEE---CSSGGGSCHHHHHHHH
T ss_pred chhhhhcCCHHHHHHHhhccccCCCCceeechhhcccCeEEecccCCCCCCcCCCeeEEEE---CCchHhCCHHHHHHHH
Confidence 0 000 00 136999999998732111357999998 4332 1 2455
Q ss_pred HHHHhcCCCCcEEEEe
Q 044572 389 HALQSIGSAERKAKSL 404 (457)
Q Consensus 389 ~~l~~~~~~~~ivyvs 404 (457)
+.+...-.+++++++.
T Consensus 236 ~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 236 RRFVPLLKPDGLLFAG 251 (274)
T ss_dssp HHHGGGEEEEEEEEEC
T ss_pred HHHHHHhCCCcEEEEE
Confidence 5555544578888885
No 245
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.48 E-value=2e-07 Score=88.54 Aligned_cols=106 Identities=12% Similarity=0.057 Sum_probs=71.2
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCC--------------------------CC
Q 044572 298 YGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSV--------------------------DG 351 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~--------------------------~~ 351 (457)
++.+|||+|||+|.+++.++.. +..+|+|+|+|+.+++.|+++++..+... ..
T Consensus 56 ~~~~vLDlGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 134 (265)
T 2i62_A 56 KGELLIDIGSGPTIYQLLSACE-SFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRR 134 (265)
T ss_dssp CEEEEEEESCTTCCGGGTTGGG-TEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHH
T ss_pred CCCEEEEECCCccHHHHHHhhc-ccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhh
Confidence 5789999999999999999874 34589999999999999999886521000 01
Q ss_pred cE-EEEEccCCcCccccc---CCccEEEECCCCC----C--ccHHHHHHHHhcCCCCcEEEEe
Q 044572 352 NI-SWHNADNSIEPLSWL---VGSDVLVVDPPRK----G--LDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 352 nv-~~~~~d~~~~~~~~~---~~~D~vi~DPPR~----G--l~~~v~~~l~~~~~~~~ivyvs 404 (457)
++ +++.+|+.+...... +.||+|++.---. . -...+++.+.++-.+++.++++
T Consensus 135 ~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 197 (265)
T 2i62_A 135 AIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMV 197 (265)
T ss_dssp HEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred hheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEE
Confidence 27 899999987532112 5799998743211 1 0123455555544466666654
No 246
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.48 E-value=2.7e-07 Score=90.70 Aligned_cols=103 Identities=7% Similarity=0.049 Sum_probs=67.6
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCC---CcEEEEEccCCcCc-----c-c-c
Q 044572 298 YGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVD---GNISWHNADNSIEP-----L-S-W 367 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~---~nv~~~~~d~~~~~-----~-~-~ 367 (457)
++.+|||+|||+|.....++. .+..+|+|||+|+.|++.|++.+...+.... -+++|+++|+.... . . .
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~-~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~ 126 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFY-GEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFY 126 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCC
T ss_pred CCCeEEEEecCCcHhHHHHHh-cCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcccc
Confidence 378999999999986665554 3356999999999999999998765221100 03678888873211 0 0 1
Q ss_pred cCCccEEEE--------CCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 368 LVGSDVLVV--------DPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 368 ~~~~D~vi~--------DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
.+.||+|++ ++. .. ..+++.+.++-.++++++++
T Consensus 127 ~~~FD~V~~~~~lhy~~~~~--~~-~~~l~~~~r~LkpGG~~i~~ 168 (302)
T 2vdw_A 127 FGKFNIIDWQFAIHYSFHPR--HY-ATVMNNLSELTASGGKVLIT 168 (302)
T ss_dssp SSCEEEEEEESCGGGTCSTT--TH-HHHHHHHHHHEEEEEEEEEE
T ss_pred CCCeeEEEECchHHHhCCHH--HH-HHHHHHHHHHcCCCCEEEEE
Confidence 257999974 333 12 35666666654577777665
No 247
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.45 E-value=3.2e-06 Score=85.13 Aligned_cols=100 Identities=11% Similarity=0.048 Sum_probs=73.2
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEEC
Q 044572 298 YGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVVD 377 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~D 377 (457)
++.+|||+|||+|.++..+++.....+++++|+ +.+++.|++++... +..++++|+.+|+++... ..||+|++.
T Consensus 202 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~--~l~~~v~~~~~d~~~~~p---~~~D~v~~~ 275 (369)
T 3gwz_A 202 GAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGR--GLADRCEILPGDFFETIP---DGADVYLIK 275 (369)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHT--TCTTTEEEEECCTTTCCC---SSCSEEEEE
T ss_pred cCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhc--CcCCceEEeccCCCCCCC---CCceEEEhh
Confidence 578999999999999999998755568999999 99999999998773 334689999999984322 279999884
Q ss_pred CCCCCccH----HHHHHHHhcCCCCcEEEE
Q 044572 378 PPRKGLDS----SLVHALQSIGSAERKAKS 403 (457)
Q Consensus 378 PPR~Gl~~----~v~~~l~~~~~~~~ivyv 403 (457)
---...+. .+++.+.+.-++++.+++
T Consensus 276 ~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i 305 (369)
T 3gwz_A 276 HVLHDWDDDDVVRILRRIATAMKPDSRLLV 305 (369)
T ss_dssp SCGGGSCHHHHHHHHHHHHTTCCTTCEEEE
T ss_pred hhhccCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 33111122 356666554445555555
No 248
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.45 E-value=3.9e-07 Score=84.59 Aligned_cols=111 Identities=12% Similarity=-0.018 Sum_probs=76.0
Q ss_pred CCCCCCHHHHHHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEE
Q 044572 276 SFGQANTRAFDILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISW 355 (457)
Q Consensus 276 ~FfQ~n~~~~~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~ 355 (457)
.||+.+.......+..+....+ +.+|||+|||+|.++..++.. +|+|+++.+++.|+++ ++++
T Consensus 26 ~~~~~~~~~~~~~~~~l~~~~~-~~~vLDiG~G~G~~~~~l~~~------~~vD~s~~~~~~a~~~----------~~~~ 88 (219)
T 1vlm_A 26 RWFLVHRFAYLSELQAVKCLLP-EGRGVEIGVGTGRFAVPLKIK------IGVEPSERMAEIARKR----------GVFV 88 (219)
T ss_dssp HHHHHTHHHHHHHHHHHHHHCC-SSCEEEETCTTSTTHHHHTCC------EEEESCHHHHHHHHHT----------TCEE
T ss_pred HHHHhcchhHHHHHHHHHHhCC-CCcEEEeCCCCCHHHHHHHHH------hccCCCHHHHHHHHhc----------CCEE
Confidence 3444455555555565666554 889999999999999988742 9999999999998865 3588
Q ss_pred EEccCCcCcccccCCccEEEECCCCCCc--cHHHHHHHHhcCCCCcEEEEe
Q 044572 356 HNADNSIEPLSWLVGSDVLVVDPPRKGL--DSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 356 ~~~d~~~~~~~~~~~~D~vi~DPPR~Gl--~~~v~~~l~~~~~~~~ivyvs 404 (457)
+++|+.+... ..+.||+|++.-.-.-+ ...+++.+.+...+++.++++
T Consensus 89 ~~~d~~~~~~-~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 138 (219)
T 1vlm_A 89 LKGTAENLPL-KDESFDFALMVTTICFVDDPERALKEAYRILKKGGYLIVG 138 (219)
T ss_dssp EECBTTBCCS-CTTCEEEEEEESCGGGSSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEcccccCCC-CCCCeeEEEEcchHhhccCHHHHHHHHHHHcCCCcEEEEE
Confidence 9999876432 13579999986542111 134566665544466666665
No 249
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.44 E-value=1.1e-06 Score=88.35 Aligned_cols=102 Identities=12% Similarity=0.039 Sum_probs=73.6
Q ss_pred CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEE
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVV 376 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~ 376 (457)
.++.+|||+|||+|.+++.++......+++++|+ +.+++.|++|+... +..++++|+.+|+.+.+ ...||+|++
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~---~~~~D~v~~ 254 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADA--GLADRVTVAEGDFFKPL---PVTADVVLL 254 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHT--TCTTTEEEEECCTTSCC---SCCEEEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhc--CCCCceEEEeCCCCCcC---CCCCCEEEE
Confidence 3578999999999999999998754458999999 99999999998873 33458999999987632 234999998
Q ss_pred CCCCCCccH----HHHHHHHhcCCCCcEEEEe
Q 044572 377 DPPRKGLDS----SLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 377 DPPR~Gl~~----~v~~~l~~~~~~~~ivyvs 404 (457)
.-.-..... .+++.+.+.-.+++.+++.
T Consensus 255 ~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 286 (374)
T 1qzz_A 255 SFVLLNWSDEDALTILRGCVRALEPGGRLLVL 286 (374)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred eccccCCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 654222222 3555555433355655543
No 250
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.43 E-value=2.3e-07 Score=98.31 Aligned_cols=102 Identities=19% Similarity=0.137 Sum_probs=71.7
Q ss_pred CCCCCCCHHHHHHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCC---------------CCEEEEEeCCHHHHHHHH
Q 044572 275 SSFGQANTRAFDILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARK---------------CRSVKCVEINKESQLSFE 339 (457)
Q Consensus 275 ~~FfQ~n~~~~~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~---------------~~~V~gVE~~~~av~~A~ 339 (457)
+.||. -+...+.|++.+.. ...+|+|.+||||+|.+.++.... ...++|+|+++.+++.|+
T Consensus 225 G~fyT-P~~Vv~lmv~ll~p---~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~ 300 (544)
T 3khk_A 225 GQYYT-PKSIVTLIVEMLEP---YKGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAA 300 (544)
T ss_dssp TTTCC-CHHHHHHHHHHHCC---CSEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHH
T ss_pred CeEeC-CHHHHHHHHHHHhc---CCCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHH
Confidence 45564 46666666665422 223999999999999888764210 237999999999999999
Q ss_pred HHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEECCCCCC
Q 044572 340 KTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVVDPPRKG 382 (457)
Q Consensus 340 ~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~DPPR~G 382 (457)
.|+... +...++.+.++|...........||+||.|||+.+
T Consensus 301 ~Nl~l~--gi~~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~ 341 (544)
T 3khk_A 301 MNMVIR--GIDFNFGKKNADSFLDDQHPDLRADFVMTNPPFNM 341 (544)
T ss_dssp HHHHHT--TCCCBCCSSSCCTTTSCSCTTCCEEEEEECCCSSC
T ss_pred HHHHHh--CCCcccceeccchhcCcccccccccEEEECCCcCC
Confidence 999874 23334545788876543222357999999999753
No 251
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.42 E-value=1.3e-06 Score=87.86 Aligned_cols=76 Identities=17% Similarity=0.125 Sum_probs=61.6
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEE
Q 044572 298 YGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVV 376 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~ 376 (457)
...+|||+|||+|.++..+++.....+|+++|+ +.+++.|+++++.. +..++++|+.+|+++....+.+.||+|++
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~~p~~~D~v~~ 254 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGL--SGSERIHGHGANLLDRDVPFPTGFDAVWM 254 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTC--TTGGGEEEEECCCCSSSCCCCCCCSEEEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhc--CcccceEEEEccccccCCCCCCCcCEEEE
Confidence 568999999999999999998655568999999 99999999998763 23468999999998741011257999988
No 252
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.41 E-value=7.4e-07 Score=84.18 Aligned_cols=99 Identities=14% Similarity=0.070 Sum_probs=62.1
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEE-ccCCcCcccccCCccEEEE
Q 044572 298 YGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHN-ADNSIEPLSWLVGSDVLVV 376 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~-~d~~~~~~~~~~~~D~vi~ 376 (457)
.+.+|||+|||+|.++..+++. ++.+|+|||+++.|++.|++|..........|+.++. .|+.. ..+|.+.+
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~-g~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~------~~~d~~~~ 109 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQN-GAKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQ------GRPSFTSI 109 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCS------CCCSEEEE
T ss_pred CCCEEEEEccCCCHHHHHHHhc-CCCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCc------CCCCEEEE
Confidence 5779999999999999999985 5679999999999999988764321000011222222 11110 12566777
Q ss_pred CCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 377 DPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 377 DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
|-....+. .++..+.+.-.+++.+++.
T Consensus 110 D~v~~~l~-~~l~~i~rvLkpgG~lv~~ 136 (232)
T 3opn_A 110 DVSFISLD-LILPPLYEILEKNGEVAAL 136 (232)
T ss_dssp CCSSSCGG-GTHHHHHHHSCTTCEEEEE
T ss_pred EEEhhhHH-HHHHHHHHhccCCCEEEEE
Confidence 76665553 4555555544455555554
No 253
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.40 E-value=3.3e-06 Score=81.60 Aligned_cols=100 Identities=12% Similarity=-0.027 Sum_probs=70.3
Q ss_pred CCeEEEEcccc---cHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcc---------c
Q 044572 299 GASVTDLYAGA---GVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPL---------S 366 (457)
Q Consensus 299 ~~~vLDl~cG~---G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~---------~ 366 (457)
..+|||+|||+ |.++..+++.....+|++||+|+.+++.|++++.. ..+++|+++|+.+... .
T Consensus 78 ~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~-----~~~v~~~~~D~~~~~~~~~~~~~~~~ 152 (274)
T 2qe6_A 78 ISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAK-----DPNTAVFTADVRDPEYILNHPDVRRM 152 (274)
T ss_dssp CCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTT-----CTTEEEEECCTTCHHHHHHSHHHHHH
T ss_pred CCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCC-----CCCeEEEEeeCCCchhhhccchhhcc
Confidence 47999999999 99887776543345999999999999999998753 2579999999976310 1
Q ss_pred c-cCCccEEEECC-----CCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 367 W-LVGSDVLVVDP-----PRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 367 ~-~~~~D~vi~DP-----PR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
+ ...||+|++.- |... ...+++.+.+.-++++.++++
T Consensus 153 ~d~~~~d~v~~~~vlh~~~d~~-~~~~l~~~~~~L~pGG~l~i~ 195 (274)
T 2qe6_A 153 IDFSRPAAIMLVGMLHYLSPDV-VDRVVGAYRDALAPGSYLFMT 195 (274)
T ss_dssp CCTTSCCEEEETTTGGGSCTTT-HHHHHHHHHHHSCTTCEEEEE
T ss_pred CCCCCCEEEEEechhhhCCcHH-HHHHHHHHHHhCCCCcEEEEE
Confidence 1 14789998753 2111 234666666643466666665
No 254
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.40 E-value=1.5e-06 Score=86.99 Aligned_cols=101 Identities=9% Similarity=-0.003 Sum_probs=73.2
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEEC
Q 044572 298 YGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVVD 377 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~D 377 (457)
++.+|||+|||+|.++..++......+++++|+ +.+++.|++|++.. +..++++|+.+|+.+.+. ..||+|++.
T Consensus 183 ~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~---~~~D~v~~~ 256 (360)
T 1tw3_A 183 NVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDE--GLSDRVDVVEGDFFEPLP---RKADAIILS 256 (360)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHT--TCTTTEEEEECCTTSCCS---SCEEEEEEE
T ss_pred cCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhc--CCCCceEEEeCCCCCCCC---CCccEEEEc
Confidence 578999999999999999998754458999999 99999999998873 334589999999876332 359999885
Q ss_pred CCCCCccH----HHHHHHHhcCCCCcEEEEe
Q 044572 378 PPRKGLDS----SLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 378 PPR~Gl~~----~v~~~l~~~~~~~~ivyvs 404 (457)
-.-..... .+++.+.+.-.+++.+++.
T Consensus 257 ~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 287 (360)
T 1tw3_A 257 FVLLNWPDHDAVRILTRCAEALEPGGRILIH 287 (360)
T ss_dssp SCGGGSCHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred ccccCCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 54222222 3555555543355655553
No 255
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.39 E-value=6.1e-07 Score=87.52 Aligned_cols=96 Identities=9% Similarity=0.007 Sum_probs=63.4
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEE-EccCCcCccc-cc-CCccEE
Q 044572 298 YGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWH-NADNSIEPLS-WL-VGSDVL 374 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~-~~d~~~~~~~-~~-~~~D~v 374 (457)
.+.+|||+|||||.|+..+++. ++++|+|||+++.|++.+.++. .++... ..++...... +. ..||+|
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~-ga~~V~aVDvs~~mL~~a~r~~--------~rv~~~~~~ni~~l~~~~l~~~~fD~v 155 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQN-GAKLVYAVDVGTNQLVWKLRQD--------DRVRSMEQYNFRYAEPVDFTEGLPSFA 155 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSSSCSCHHHHTC--------TTEEEECSCCGGGCCGGGCTTCCCSEE
T ss_pred cccEEEecCCCccHHHHHHHhC-CCCEEEEEECCHHHHHHHHHhC--------cccceecccCceecchhhCCCCCCCEE
Confidence 5789999999999999999875 6789999999999998865431 122222 2233222111 11 249999
Q ss_pred EECCCCCCccHHHHHHHHh-cCCCCcEEEE
Q 044572 375 VVDPPRKGLDSSLVHALQS-IGSAERKAKS 403 (457)
Q Consensus 375 i~DPPR~Gl~~~v~~~l~~-~~~~~~ivyv 403 (457)
++|--...+.. ++..+.+ +++.++++.+
T Consensus 156 ~~d~sf~sl~~-vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 156 SIDVSFISLNL-ILPALAKILVDGGQVVAL 184 (291)
T ss_dssp EECCSSSCGGG-THHHHHHHSCTTCEEEEE
T ss_pred EEEeeHhhHHH-HHHHHHHHcCcCCEEEEE
Confidence 99987666644 5555544 5555566555
No 256
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.38 E-value=4e-06 Score=83.89 Aligned_cols=101 Identities=8% Similarity=-0.031 Sum_probs=72.4
Q ss_pred CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEE
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVV 376 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~ 376 (457)
.++.+|||+|||+|.++..+++.....+|+++|+ +.+++.|+++++.. +..++++++.+|+++.. ...+|+|++
T Consensus 189 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~---~~~~D~v~~ 262 (359)
T 1x19_A 189 DGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEK--GVADRMRGIAVDIYKES---YPEADAVLF 262 (359)
T ss_dssp TTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHT--TCTTTEEEEECCTTTSC---CCCCSEEEE
T ss_pred CCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhc--CCCCCEEEEeCccccCC---CCCCCEEEE
Confidence 3678999999999999999998754459999999 99999999998873 23356999999998752 234599988
Q ss_pred CCCCCCcc----HHHHHHHHhcCCCCcEEEE
Q 044572 377 DPPRKGLD----SSLVHALQSIGSAERKAKS 403 (457)
Q Consensus 377 DPPR~Gl~----~~v~~~l~~~~~~~~ivyv 403 (457)
.-.-.... ..+++.+.+.-++++.+++
T Consensus 263 ~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i 293 (359)
T 1x19_A 263 CRILYSANEQLSTIMCKKAFDAMRSGGRLLI 293 (359)
T ss_dssp ESCGGGSCHHHHHHHHHHHHTTCCTTCEEEE
T ss_pred echhccCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 54422222 2345555554345555544
No 257
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.35 E-value=1.7e-06 Score=85.43 Aligned_cols=102 Identities=13% Similarity=0.072 Sum_probs=71.7
Q ss_pred CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEE
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVV 376 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~ 376 (457)
.++.+|||+|||+|.++..++......+|+++|++ .+++.|++++... +..++++|+.+|+.+.. ....||+|++
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~--~~~~~D~v~~ 238 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQ--GVASRYHTIAGSAFEVD--YGNDYDLVLL 238 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHH--TCGGGEEEEESCTTTSC--CCSCEEEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhc--CCCcceEEEecccccCC--CCCCCcEEEE
Confidence 45789999999999999999987544599999999 9999999998763 23357999999997642 2345999998
Q ss_pred CCCCCCcc----HHHHHHHHhcCCCCcEEEE
Q 044572 377 DPPRKGLD----SSLVHALQSIGSAERKAKS 403 (457)
Q Consensus 377 DPPR~Gl~----~~v~~~l~~~~~~~~ivyv 403 (457)
.-.-...+ ..+++.+.+.-.+++.+++
T Consensus 239 ~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i 269 (335)
T 2r3s_A 239 PNFLHHFDVATCEQLLRKIKTALAVEGKVIV 269 (335)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred cchhccCCHHHHHHHHHHHHHhCCCCcEEEE
Confidence 33211111 2345555443335554444
No 258
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.34 E-value=3e-06 Score=83.82 Aligned_cols=73 Identities=14% Similarity=0.058 Sum_probs=60.6
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEE
Q 044572 298 YGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVV 376 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~ 376 (457)
+..+|||+|||+|.++..+++.....+++++|+ +.+++.|++++... +..++++|+.+|+++... ..||+|++
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~p---~~~D~v~~ 241 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDT--GLSGRAQVVVGSFFDPLP---AGAGGYVL 241 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHT--TCTTTEEEEECCTTSCCC---CSCSEEEE
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhc--CcCcCeEEecCCCCCCCC---CCCcEEEE
Confidence 467999999999999999998655568999999 99999999998763 334689999999974322 27999988
No 259
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.33 E-value=2.1e-06 Score=85.53 Aligned_cols=102 Identities=11% Similarity=0.059 Sum_probs=72.5
Q ss_pred CCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEECC
Q 044572 299 GASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVVDP 378 (457)
Q Consensus 299 ~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~DP 378 (457)
+.+|||+|||+|.++..+++.....+++++|+ +.+++.|+++++.. +..++++++.+|+++........||+|++.-
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~ 256 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAH--DLGGRVEFFEKNLLDARNFEGGAADVVMLND 256 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHT--TCGGGEEEEECCTTCGGGGTTCCEEEEEEES
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhc--CCCCceEEEeCCcccCcccCCCCccEEEEec
Confidence 78999999999999999998755569999999 88999999998873 3345799999999875311235699999843
Q ss_pred CCCCcc----HHHHHHHHhcCCCCcEEEE
Q 044572 379 PRKGLD----SSLVHALQSIGSAERKAKS 403 (457)
Q Consensus 379 PR~Gl~----~~v~~~l~~~~~~~~ivyv 403 (457)
--...+ ..+++.+.+.-++++.+++
T Consensus 257 vlh~~~~~~~~~~l~~~~~~L~pgG~l~i 285 (352)
T 3mcz_A 257 CLHYFDAREAREVIGHAAGLVKPGGALLI 285 (352)
T ss_dssp CGGGSCHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred ccccCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 211112 2345555443335555555
No 260
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.33 E-value=8.2e-07 Score=82.06 Aligned_cols=101 Identities=12% Similarity=0.071 Sum_probs=70.4
Q ss_pred HHhhC-CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccc-cC
Q 044572 292 LQKYV-PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSW-LV 369 (457)
Q Consensus 292 i~~~~-~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~-~~ 369 (457)
+.+.+ .++.+|||+|||+|.++..++.. + .+|+|+|+++.+++.|+++. .+++.+|+.+..... .+
T Consensus 25 l~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~-~~~~~~D~~~~~~~~~~~~~----------~~~~~~d~~~~~~~~~~~ 92 (230)
T 3cc8_A 25 LLKHIKKEWKEVLDIGCSSGALGAAIKEN-G-TRVSGIEAFPEAAEQAKEKL----------DHVVLGDIETMDMPYEEE 92 (230)
T ss_dssp HHTTCCTTCSEEEEETCTTSHHHHHHHTT-T-CEEEEEESSHHHHHHHHTTS----------SEEEESCTTTCCCCSCTT
T ss_pred HHHHhccCCCcEEEeCCCCCHHHHHHHhc-C-CeEEEEeCCHHHHHHHHHhC----------CcEEEcchhhcCCCCCCC
Confidence 34444 36789999999999999999986 4 69999999999999887542 167889987632222 25
Q ss_pred CccEEEECCCCCCc--cHHHHHHHHhcCCCCcEEEEe
Q 044572 370 GSDVLVVDPPRKGL--DSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 370 ~~D~vi~DPPR~Gl--~~~v~~~l~~~~~~~~ivyvs 404 (457)
.||+|++.-.-.-+ ...+++.+.+.-.+++.++++
T Consensus 93 ~fD~v~~~~~l~~~~~~~~~l~~~~~~L~~gG~l~~~ 129 (230)
T 3cc8_A 93 QFDCVIFGDVLEHLFDPWAVIEKVKPYIKQNGVILAS 129 (230)
T ss_dssp CEEEEEEESCGGGSSCHHHHHHHTGGGEEEEEEEEEE
T ss_pred ccCEEEECChhhhcCCHHHHHHHHHHHcCCCCEEEEE
Confidence 79999985432111 134556555544467777775
No 261
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.30 E-value=5.1e-07 Score=87.05 Aligned_cols=76 Identities=22% Similarity=0.132 Sum_probs=54.2
Q ss_pred CCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEE--EccCCcCcccccCCccE
Q 044572 296 VPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWH--NADNSIEPLSWLVGSDV 373 (457)
Q Consensus 296 ~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~--~~d~~~~~~~~~~~~D~ 373 (457)
+.++.+|||||||+|.++..+++. .+|+|||+++ ++..++++.... .....++.|+ ++|+.+.. ...||+
T Consensus 72 ~~~g~~VLDlGcGtG~~s~~la~~---~~V~gvD~s~-m~~~a~~~~~~~-~~~~~~v~~~~~~~D~~~l~---~~~fD~ 143 (265)
T 2oxt_A 72 VELTGRVVDLGCGRGGWSYYAASR---PHVMDVRAYT-LGVGGHEVPRIT-ESYGWNIVKFKSRVDIHTLP---VERTDV 143 (265)
T ss_dssp CCCCEEEEEESCTTSHHHHHHHTS---TTEEEEEEEC-CCCSSCCCCCCC-CBTTGGGEEEECSCCTTTSC---CCCCSE
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHc---CcEEEEECch-hhhhhhhhhhhh-hccCCCeEEEecccCHhHCC---CCCCcE
Confidence 457889999999999999999975 4899999998 433222211000 0011278999 99998743 357999
Q ss_pred EEECCC
Q 044572 374 LVVDPP 379 (457)
Q Consensus 374 vi~DPP 379 (457)
|+.|-.
T Consensus 144 V~sd~~ 149 (265)
T 2oxt_A 144 IMCDVG 149 (265)
T ss_dssp EEECCC
T ss_pred EEEeCc
Confidence 999976
No 262
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.26 E-value=3.5e-06 Score=83.26 Aligned_cols=99 Identities=15% Similarity=0.131 Sum_probs=70.5
Q ss_pred CeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEECCC
Q 044572 300 ASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVVDPP 379 (457)
Q Consensus 300 ~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~DPP 379 (457)
.+|||+|||+|.++..++......+++++|+ +.+++.|++++... +..++++++.+|+.+.. ...||+|++.-.
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~---~~~~D~v~~~~v 242 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSL--LAGERVSLVGGDMLQEV---PSNGDIYLLSRI 242 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHH--HHTTSEEEEESCTTTCC---CSSCSEEEEESC
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhc--CCCCcEEEecCCCCCCC---CCCCCEEEEchh
Confidence 8999999999999999998654458999999 99999999987652 22357999999997732 256999998443
Q ss_pred CCCccH----HHHHHHHhcCCCCcEEEEe
Q 044572 380 RKGLDS----SLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 380 R~Gl~~----~v~~~l~~~~~~~~ivyvs 404 (457)
-..... .+++.+.+.-.+++.+++.
T Consensus 243 l~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 271 (334)
T 2ip2_A 243 IGDLDEAASLRLLGNCREAMAGDGRVVVI 271 (334)
T ss_dssp GGGCCHHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred ccCCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 211111 4455555433355555553
No 263
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.23 E-value=2e-06 Score=83.21 Aligned_cols=106 Identities=11% Similarity=0.045 Sum_probs=66.1
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCC--------------C-C------------
Q 044572 298 YGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKS--------------V-D------------ 350 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~--------------~-~------------ 350 (457)
++.+|||+|||+|.+++.++.. +..+|+|||+|+.|++.|+++++..... + .
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACS-HFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGG-GCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhcc-CCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 5789999999999977655542 3459999999999999999876531100 0 0
Q ss_pred CcEEEEEccCCcCcc-c---c-cCCccEEEECCCCCC----c--cHHHHHHHHhcCCCCcEEEEe
Q 044572 351 GNISWHNADNSIEPL-S---W-LVGSDVLVVDPPRKG----L--DSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 351 ~nv~~~~~d~~~~~~-~---~-~~~~D~vi~DPPR~G----l--~~~v~~~l~~~~~~~~ivyvs 404 (457)
..++++.+|+.+.+. . . .+.||+|+..---.- + ...+++.+.++-.+++.++++
T Consensus 150 ~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~ 214 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLI 214 (289)
T ss_dssp HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred hhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 015677778876321 1 1 135999988642110 1 123455555544466666654
No 264
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=98.22 E-value=5.4e-06 Score=82.27 Aligned_cols=93 Identities=19% Similarity=0.201 Sum_probs=69.6
Q ss_pred CCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEECC
Q 044572 299 GASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVVDP 378 (457)
Q Consensus 299 ~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~DP 378 (457)
+.+++|||||+|.+++.+.. .|+..|.++|+++.|++..+.|.... . ++|+.+........+|+|+.+|
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~-aG~~~v~~~e~d~~a~~t~~~N~~~~------~----~~Di~~~~~~~~~~~D~l~~gp 79 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALES-CGAECVYSNEWDKYAQEVYEMNFGEK------P----EGDITQVNEKTIPDHDILCAGF 79 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHH-TTCEEEEEECCCHHHHHHHHHHHSCC------C----BSCGGGSCGGGSCCCSEEEEEC
T ss_pred CCcEEEECCCcCHHHHHHHH-CCCeEEEEEeCCHHHHHHHHHHcCCC------C----cCCHHHcCHhhCCCCCEEEECC
Confidence 46899999999999999886 57888999999999999999997431 1 5888776544445799999999
Q ss_pred CCC---------Cc-------cHHHHHHHHhcCCCCcEEEEe
Q 044572 379 PRK---------GL-------DSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 379 PR~---------Gl-------~~~v~~~l~~~~~~~~ivyvs 404 (457)
|-. |. -.++++.+..++ | +++.+.
T Consensus 80 PCQ~fS~ag~~~g~~d~r~~L~~~~~r~i~~~~-P-~~~~~E 119 (327)
T 2c7p_A 80 PCQAFSISGKQKGFEDSRGTLFFDIARIVREKK-P-KVVFME 119 (327)
T ss_dssp CCTTTCTTSCCCGGGSTTSCHHHHHHHHHHHHC-C-SEEEEE
T ss_pred CCCCcchhcccCCCcchhhHHHHHHHHHHHhcc-C-cEEEEe
Confidence 932 22 124566666665 4 455554
No 265
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.21 E-value=3.9e-06 Score=72.80 Aligned_cols=91 Identities=15% Similarity=0.206 Sum_probs=65.3
Q ss_pred HHHHHHHHHHhhCCCCCeEEEEccccc-HHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCc
Q 044572 284 AFDILLRKLQKYVPYGASVTDLYAGAG-VIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSI 362 (457)
Q Consensus 284 ~~~~l~~~i~~~~~~~~~vLDl~cG~G-~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~ 362 (457)
+.+.|.+.+.+...++.+|||+|||.| ..+..||...++ .|+++|+++.|++ |++.|+++
T Consensus 21 m~e~LaeYI~~~~~~~~rVlEVG~G~g~~vA~~La~~~g~-~V~atDInp~Av~------------------~v~dDiF~ 81 (153)
T 2k4m_A 21 MWNDLAVYIIRCSGPGTRVVEVGAGRFLYVSDYIRKHSKV-DLVLTDIKPSHGG------------------IVRDDITS 81 (153)
T ss_dssp HHHHHHHHHHHHSCSSSEEEEETCTTCCHHHHHHHHHSCC-EEEEECSSCSSTT------------------EECCCSSS
T ss_pred HHHHHHHHHHhcCCCCCcEEEEccCCChHHHHHHHHhCCC-eEEEEECCccccc------------------eEEccCCC
Confidence 345666666665556789999999999 599999974443 6999999999874 78889887
Q ss_pred CcccccCCccEE-EECCCCCCccHHHHHHHHhc
Q 044572 363 EPLSWLVGSDVL-VVDPPRKGLDSSLVHALQSI 394 (457)
Q Consensus 363 ~~~~~~~~~D~v-i~DPPR~Gl~~~v~~~l~~~ 394 (457)
-..+.-..||+| -++||+. +.+.+++.-.+.
T Consensus 82 P~~~~Y~~~DLIYsirPP~E-l~~~i~~lA~~v 113 (153)
T 2k4m_A 82 PRMEIYRGAALIYSIRPPAE-IHSSLMRVADAV 113 (153)
T ss_dssp CCHHHHTTEEEEEEESCCTT-THHHHHHHHHHH
T ss_pred CcccccCCcCEEEEcCCCHH-HHHHHHHHHHHc
Confidence 543333589999 8999973 333344433333
No 266
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=98.18 E-value=3.3e-06 Score=82.61 Aligned_cols=56 Identities=23% Similarity=0.224 Sum_probs=45.9
Q ss_pred HHHHHHHhhC-CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhh
Q 044572 287 ILLRKLQKYV-PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSR 344 (457)
Q Consensus 287 ~l~~~i~~~~-~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~ 344 (457)
.|++.+++.. .+|+.|||+|||+|++++.++..+ ++++|||+++++++.|++|++.
T Consensus 223 ~l~~~~i~~~~~~~~~vlD~f~GsGt~~~~a~~~g--~~~~g~e~~~~~~~~a~~r~~~ 279 (297)
T 2zig_A 223 ELAERLVRMFSFVGDVVLDPFAGTGTTLIAAARWG--RRALGVELVPRYAQLAKERFAR 279 (297)
T ss_dssp HHHHHHHHHHCCTTCEEEETTCTTTHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHcC--CeEEEEeCCHHHHHHHHHHHHH
Confidence 3444444433 478999999999999999998753 5999999999999999999876
No 267
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.18 E-value=2.8e-07 Score=89.46 Aligned_cols=76 Identities=18% Similarity=0.122 Sum_probs=54.5
Q ss_pred CCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEE--EccCCcCcccccCCccE
Q 044572 296 VPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWH--NADNSIEPLSWLVGSDV 373 (457)
Q Consensus 296 ~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~--~~d~~~~~~~~~~~~D~ 373 (457)
+.++.+|||||||+|.++..+|+. .+|+|||+++ ++..++++.... .....++.|+ ++|+.+.. ...||+
T Consensus 80 ~~~g~~VLDlGcGtG~~s~~la~~---~~V~gVD~s~-m~~~a~~~~~~~-~~~~~~v~~~~~~~D~~~l~---~~~fD~ 151 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWSYYAASQ---PNVREVKAYT-LGTSGHEKPRLV-ETFGWNLITFKSKVDVTKME---PFQADT 151 (276)
T ss_dssp CCCCEEEEEESCTTCHHHHHHHTS---TTEEEEEEEC-CCCTTSCCCCCC-CCTTGGGEEEECSCCGGGCC---CCCCSE
T ss_pred CCCCCEEEEeccCCCHHHHHHHHc---CCEEEEECch-hhhhhhhchhhh-hhcCCCeEEEeccCcHhhCC---CCCcCE
Confidence 346889999999999999999975 4899999998 533332221100 0111278999 99987743 357999
Q ss_pred EEECCC
Q 044572 374 LVVDPP 379 (457)
Q Consensus 374 vi~DPP 379 (457)
|+.|-.
T Consensus 152 Vvsd~~ 157 (276)
T 2wa2_A 152 VLCDIG 157 (276)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 999976
No 268
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.11 E-value=4.3e-06 Score=81.14 Aligned_cols=105 Identities=17% Similarity=0.125 Sum_probs=62.6
Q ss_pred CCCeEEEEcccccHHHHHHH----hhCCCCEE--EEEeCCHHHHHHHHHHHhhCCCCCCCcEEE--EEccCCcCccc---
Q 044572 298 YGASVTDLYAGAGVIGLSLA----AARKCRSV--KCVEINKESQLSFEKTVSRLPKSVDGNISW--HNADNSIEPLS--- 366 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA----~~~~~~~V--~gVE~~~~av~~A~~Na~~~~~~~~~nv~~--~~~d~~~~~~~--- 366 (457)
++.+|||+|||+|.+++.++ ......+| +|||.|++|++.|+++++.. ....++.+ ..+++.+....
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~ 129 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKT--SNLENVKFAWHKETSSEYQSRMLE 129 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTC--SSCTTEEEEEECSCHHHHHHHHHT
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhc--cCCCcceEEEEecchhhhhhhhcc
Confidence 45789999999998776433 22222334 99999999999999987642 12345544 45555433211
Q ss_pred --ccCCccEEEECCCCCCc--cHHHHHHHHhcCCCCcEEEEe
Q 044572 367 --WLVGSDVLVVDPPRKGL--DSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 367 --~~~~~D~vi~DPPR~Gl--~~~v~~~l~~~~~~~~ivyvs 404 (457)
..+.||+|++-=--.-+ ...+++.+.++-.+++.+.+.
T Consensus 130 ~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~ 171 (292)
T 2aot_A 130 KKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLII 171 (292)
T ss_dssp TTCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEE
T ss_pred ccCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEE
Confidence 13579999873210000 124566666543456655553
No 269
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.08 E-value=8.4e-06 Score=86.15 Aligned_cols=102 Identities=17% Similarity=0.098 Sum_probs=71.5
Q ss_pred CCCCCCCHHHHHHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCC-------------CCEEEEEeCCHHHHHHHHHH
Q 044572 275 SSFGQANTRAFDILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARK-------------CRSVKCVEINKESQLSFEKT 341 (457)
Q Consensus 275 ~~FfQ~n~~~~~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~-------------~~~V~gVE~~~~av~~A~~N 341 (457)
+-||.. +...+.|++.+.. ..+.+|+|.+||||+|-+.+..... -..++|+|+++.++..|+.|
T Consensus 197 GqfyTP-~~Vv~lmv~l~~p--~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mN 273 (530)
T 3ufb_A 197 GEFYTP-RPVVRFMVEVMDP--QLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMN 273 (530)
T ss_dssp CCCCCC-HHHHHHHHHHHCC--CTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHH
T ss_pred ceECCc-HHHHHHHHHhhcc--CCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHH
Confidence 567753 5666665554322 3578999999999999887764210 13699999999999999999
Q ss_pred HhhCCCCCCCcEEEEEccCCcCcccc---cCCccEEEECCCCCC
Q 044572 342 VSRLPKSVDGNISWHNADNSIEPLSW---LVGSDVLVVDPPRKG 382 (457)
Q Consensus 342 a~~~~~~~~~nv~~~~~d~~~~~~~~---~~~~D~vi~DPPR~G 382 (457)
+-.. +.+...+..+|........ ..+||+||.|||..+
T Consensus 274 l~lh---g~~~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~ 314 (530)
T 3ufb_A 274 LLLH---GLEYPRIDPENSLRFPLREMGDKDRVDVILTNPPFGG 314 (530)
T ss_dssp HHHH---TCSCCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSC
T ss_pred HHhc---CCccccccccccccCchhhhcccccceEEEecCCCCc
Confidence 8762 3344466778875432211 247999999999753
No 270
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.08 E-value=5.2e-06 Score=80.01 Aligned_cols=84 Identities=10% Similarity=0.013 Sum_probs=65.1
Q ss_pred HHHHHHhhC--CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcc
Q 044572 288 LLRKLQKYV--PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPL 365 (457)
Q Consensus 288 l~~~i~~~~--~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~ 365 (457)
|++.+++.+ .++..+||+.||.|..+..++.. ..+|+|+|.+++|++.|++ ++. +++++++++..+...
T Consensus 10 Ll~e~le~L~~~~gg~~VD~T~G~GGHS~~il~~--~g~VigiD~Dp~Ai~~A~~-L~~------~rv~lv~~~f~~l~~ 80 (285)
T 1wg8_A 10 LYQEALDLLAVRPGGVYVDATLGGAGHARGILER--GGRVIGLDQDPEAVARAKG-LHL------PGLTVVQGNFRHLKR 80 (285)
T ss_dssp THHHHHHHHTCCTTCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHH-TCC------TTEEEEESCGGGHHH
T ss_pred HHHHHHHhhCCCCCCEEEEeCCCCcHHHHHHHHC--CCEEEEEeCCHHHHHHHHh-hcc------CCEEEEECCcchHHH
Confidence 344444443 36889999999999999999986 3499999999999999987 532 589999999876421
Q ss_pred ---cc-cCCccEEEECCCC
Q 044572 366 ---SW-LVGSDVLVVDPPR 380 (457)
Q Consensus 366 ---~~-~~~~D~vi~DPPR 380 (457)
.. ...+|.|++|+..
T Consensus 81 ~L~~~g~~~vDgIL~DLGv 99 (285)
T 1wg8_A 81 HLAALGVERVDGILADLGV 99 (285)
T ss_dssp HHHHTTCSCEEEEEEECSC
T ss_pred HHHHcCCCCcCEEEeCCcc
Confidence 11 1469999999984
No 271
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.07 E-value=5.8e-05 Score=69.52 Aligned_cols=113 Identities=12% Similarity=0.008 Sum_probs=75.7
Q ss_pred CHHHHHHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccC
Q 044572 281 NTRAFDILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADN 360 (457)
Q Consensus 281 n~~~~~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~ 360 (457)
...+.+.|...+ .+.++||++||| .-|+.+|+.. .++|+.||.+++..+.|++|++.++....++|+++.+|+
T Consensus 17 ~~~~~~~L~~~l----~~a~~VLEiGtG--ySTl~lA~~~-~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda 89 (202)
T 3cvo_A 17 PPAEAEALRMAY----EEAEVILEYGSG--GSTVVAAELP-GKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDI 89 (202)
T ss_dssp CHHHHHHHHHHH----HHCSEEEEESCS--HHHHHHHTST-TCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCC
T ss_pred CHHHHHHHHHHh----hCCCEEEEECch--HHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCc
Confidence 344544443322 246899999984 6777777642 369999999999999999999984310057899999997
Q ss_pred CcC--------------ccc-------cc--CCccEEEECCCCCCccHHHHHHHHhcCCCCcEEEE
Q 044572 361 SIE--------------PLS-------WL--VGSDVLVVDPPRKGLDSSLVHALQSIGSAERKAKS 403 (457)
Q Consensus 361 ~~~--------------~~~-------~~--~~~D~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyv 403 (457)
.+. +.. .. ..||+|++|=... . .-+...+..++ +++++.+
T Consensus 90 ~~~~~wg~p~~~~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~k~-~-~~~~~~l~~l~-~GG~Iv~ 152 (202)
T 3cvo_A 90 GPTGDWGHPVSDAKWRSYPDYPLAVWRTEGFRHPDVVLVDGRFR-V-GCALATAFSIT-RPVTLLF 152 (202)
T ss_dssp SSBCGGGCBSSSTTGGGTTHHHHGGGGCTTCCCCSEEEECSSSH-H-HHHHHHHHHCS-SCEEEEE
T ss_pred hhhhcccccccchhhhhHHHHhhhhhccccCCCCCEEEEeCCCc-h-hHHHHHHHhcC-CCeEEEE
Confidence 653 111 11 5699999997532 1 22344555564 7777755
No 272
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.07 E-value=9.3e-06 Score=79.79 Aligned_cols=74 Identities=19% Similarity=0.121 Sum_probs=52.9
Q ss_pred CCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeC----CHHHHHHHHHHHhhCCCCCCCcEEEEEc-cCCcCcccccCC
Q 044572 296 VPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEI----NKESQLSFEKTVSRLPKSVDGNISWHNA-DNSIEPLSWLVG 370 (457)
Q Consensus 296 ~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~----~~~av~~A~~Na~~~~~~~~~nv~~~~~-d~~~~~~~~~~~ 370 (457)
+.++.+|||||||+|.++..+|+. .+|+|||+ ++.+++.+ .++. ...+++.|+++ |+.... ...
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~---~~V~gvD~~~~~~~~~~~~~--~~~~---~~~~~v~~~~~~D~~~l~---~~~ 148 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGL---KNVREVKGLTKGGPGHEEPI--PMST---YGWNLVRLQSGVDVFFIP---PER 148 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTS---TTEEEEEEECCCSTTSCCCC--CCCS---TTGGGEEEECSCCTTTSC---CCC
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhc---CCEEEEeccccCchhHHHHH--Hhhh---cCCCCeEEEeccccccCC---cCC
Confidence 456889999999999999999975 38999999 55433211 1111 11257999999 887643 257
Q ss_pred ccEEEECCCC
Q 044572 371 SDVLVVDPPR 380 (457)
Q Consensus 371 ~D~vi~DPPR 380 (457)
||+|+.|-+-
T Consensus 149 fD~V~sd~~~ 158 (305)
T 2p41_A 149 CDTLLCDIGE 158 (305)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCcc
Confidence 9999999653
No 273
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.04 E-value=7e-05 Score=72.87 Aligned_cols=108 Identities=13% Similarity=0.019 Sum_probs=83.1
Q ss_pred CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhC--CCCCCCcEEEEEccCCcCcccccCCccEE
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRL--PKSVDGNISWHNADNSIEPLSWLVGSDVL 374 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~--~~~~~~nv~~~~~d~~~~~~~~~~~~D~v 374 (457)
+.-++||=+|.|.|+..-.+++.....+|+.||++++.++.+++-.... +.....+++++.+|+.+++....++||+|
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvI 161 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEE
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEE
Confidence 4568999999999999999998666789999999999999998764321 11124689999999999887666789999
Q ss_pred EECCCCC-C-----ccHHHHHHHHhcCCCCcEEEEe
Q 044572 375 VVDPPRK-G-----LDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 375 i~DPPR~-G-----l~~~v~~~l~~~~~~~~ivyvs 404 (457)
|+|.+-. | .+.+..+.+.+.-.+++++.+-
T Consensus 162 i~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q 197 (294)
T 3o4f_A 162 ISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQ 197 (294)
T ss_dssp EESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEE
T ss_pred EEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEe
Confidence 9997632 1 2346777777665577776664
No 274
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=98.01 E-value=9e-06 Score=77.92 Aligned_cols=46 Identities=15% Similarity=0.166 Sum_probs=42.1
Q ss_pred CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhh
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSR 344 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~ 344 (457)
.+|+.|||.|||+|++++.++..+ ++++|+|+++.+++.|++|++.
T Consensus 211 ~~~~~vlD~f~GsGtt~~~a~~~g--r~~ig~e~~~~~~~~~~~r~~~ 256 (260)
T 1g60_A 211 NPNDLVLDCFMGSGTTAIVAKKLG--RNFIGCDMNAEYVNQANFVLNQ 256 (260)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHC
T ss_pred CCCCEEEECCCCCCHHHHHHHHcC--CeEEEEeCCHHHHHHHHHHHHh
Confidence 478999999999999999988753 5999999999999999999986
No 275
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=97.95 E-value=1.8e-05 Score=77.15 Aligned_cols=121 Identities=13% Similarity=0.004 Sum_probs=71.3
Q ss_pred CHHHHHHHHHHHH-h--hCCCCCeEEEEccc------ccHHHHHHHhhCC-CCEEEEEeCCHHHHHHHHHHHhhCCCCCC
Q 044572 281 NTRAFDILLRKLQ-K--YVPYGASVTDLYAG------AGVIGLSLAAARK-CRSVKCVEINKESQLSFEKTVSRLPKSVD 350 (457)
Q Consensus 281 n~~~~~~l~~~i~-~--~~~~~~~vLDl~cG------~G~~sl~lA~~~~-~~~V~gVE~~~~av~~A~~Na~~~~~~~~ 350 (457)
|...+..+.+.+. . .+.++.+|||+||| +|+ ..+++..+ ..+|+|||+++. +
T Consensus 43 n~~~y~~l~~~l~~~~l~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-v--------------- 104 (290)
T 2xyq_A 43 NVAKYTQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-V--------------- 104 (290)
T ss_dssp HHHHHHHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-B---------------
T ss_pred cHHHHHHHHHHHHHhhcCCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-C---------------
Confidence 3334455555542 1 23478999999994 477 44454444 369999999998 1
Q ss_pred CcEEE-EEccCCcCcccccCCccEEEECCCCC--C-----------ccHHHHHHHHhcCCCCcEEEEeccCCCCCchhch
Q 044572 351 GNISW-HNADNSIEPLSWLVGSDVLVVDPPRK--G-----------LDSSLVHALQSIGSAERKAKSLSESSSSMVKEEK 416 (457)
Q Consensus 351 ~nv~~-~~~d~~~~~~~~~~~~D~vi~DPPR~--G-----------l~~~v~~~l~~~~~~~~ivyvs~~~~~c~~~~~~ 416 (457)
.++++ +++|+.+... ...||+|+.|++-. | +-..+++.+.+.-.+++.+++. .......
T Consensus 105 ~~v~~~i~gD~~~~~~--~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~-----~~~~~~~ 177 (290)
T 2xyq_A 105 SDADSTLIGDCATVHT--ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVK-----ITEHSWN 177 (290)
T ss_dssp CSSSEEEESCGGGCCC--SSCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEE-----ECSSSCC
T ss_pred CCCEEEEECccccCCc--cCcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEE-----EeccCCH
Confidence 24678 9999976432 25799999996421 1 1123455544433356666654 2222233
Q ss_pred hhHHHHHHHh
Q 044572 417 RPWILRAKEA 426 (457)
Q Consensus 417 ~~~~~~~~~~ 426 (457)
..+...++..
T Consensus 178 ~~l~~~l~~~ 187 (290)
T 2xyq_A 178 ADLYKLMGHF 187 (290)
T ss_dssp HHHHHHHTTE
T ss_pred HHHHHHHHHc
Confidence 4555555544
No 276
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=97.93 E-value=2.1e-05 Score=84.40 Aligned_cols=101 Identities=15% Similarity=0.107 Sum_probs=69.5
Q ss_pred CCeEEEEcccccHHHH---HHHhhCC----------CCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcc
Q 044572 299 GASVTDLYAGAGVIGL---SLAAARK----------CRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPL 365 (457)
Q Consensus 299 ~~~vLDl~cG~G~~sl---~lA~~~~----------~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~ 365 (457)
+..|||+|||+|.++. .+++..+ ..+|+|||.|+.|+..+++.... +..++|+++++|++++..
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~N---g~~d~VtVI~gd~eev~l 486 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVR---TWKRRVTIIESDMRSLPG 486 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHH---TTTTCSEEEESCGGGHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhc---CCCCeEEEEeCchhhccc
Confidence 3579999999999964 3433111 34999999999988776655442 344679999999988632
Q ss_pred c----ccCCccEEEECCC-CCC---ccHHHHHHHHhcCCCCcEEE
Q 044572 366 S----WLVGSDVLVVDPP-RKG---LDSSLVHALQSIGSAERKAK 402 (457)
Q Consensus 366 ~----~~~~~D~vi~DPP-R~G---l~~~v~~~l~~~~~~~~ivy 402 (457)
. ..++.|+||...- ..| +.++++....+...++++++
T Consensus 487 p~~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 487 IAKDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HHHHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred ccccCCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEE
Confidence 1 1367999999887 344 34466666665544666654
No 277
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=97.92 E-value=5.2e-05 Score=73.14 Aligned_cols=103 Identities=13% Similarity=-0.060 Sum_probs=63.9
Q ss_pred CCeEEEEccccc--HHHHHHHh-hCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccc-----cCC
Q 044572 299 GASVTDLYAGAG--VIGLSLAA-ARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSW-----LVG 370 (457)
Q Consensus 299 ~~~vLDl~cG~G--~~sl~lA~-~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~-----~~~ 370 (457)
..+|||||||+| .....++. .....+|++||.|+.|++.|++++... ...+++|+++|+.+....+ ...
T Consensus 79 ~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~---~~~~~~~v~aD~~~~~~~l~~~~~~~~ 155 (277)
T 3giw_A 79 IRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLAST---PEGRTAYVEADMLDPASILDAPELRDT 155 (277)
T ss_dssp CCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCC---SSSEEEEEECCTTCHHHHHTCHHHHTT
T ss_pred CCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccC---CCCcEEEEEecccChhhhhcccccccc
Confidence 368999999973 23344443 233469999999999999999887642 2357999999998742100 123
Q ss_pred cc-----EEEECCCCC---Cc--cHHHHHHHHhcCCCCcEEEEe
Q 044572 371 SD-----VLVVDPPRK---GL--DSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 371 ~D-----~vi~DPPR~---Gl--~~~v~~~l~~~~~~~~ivyvs 404 (457)
|| .|+++-=-. .- ...++..+.....++..+.++
T Consensus 156 ~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls 199 (277)
T 3giw_A 156 LDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMS 199 (277)
T ss_dssp CCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEE
T ss_pred cCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEE
Confidence 44 454422100 00 124666666655577777665
No 278
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=97.91 E-value=0.00011 Score=73.31 Aligned_cols=72 Identities=18% Similarity=0.231 Sum_probs=58.6
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEE
Q 044572 298 YGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVV 376 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~ 376 (457)
...+|+|+|||+|.+++.++++....+++..|. +++++.|+++++. ...++|+|+.+|.++.. ...+|++++
T Consensus 179 ~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~---~~~~rv~~~~gD~~~~~---~~~~D~~~~ 250 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSF---QEEEQIDFQEGDFFKDP---LPEADLYIL 250 (353)
T ss_dssp GCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC-----CCSEEEEESCTTTSC---CCCCSEEEE
T ss_pred cCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhh---cccCceeeecCccccCC---CCCceEEEe
Confidence 567999999999999999998876667888887 8899999998764 34579999999987642 346799887
No 279
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=97.90 E-value=2.2e-05 Score=77.64 Aligned_cols=69 Identities=22% Similarity=0.271 Sum_probs=57.7
Q ss_pred eEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEECCC
Q 044572 301 SVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVVDPP 379 (457)
Q Consensus 301 ~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~DPP 379 (457)
+|||||||.|.+++-+-. +|+.-|.++|+++.|++..+.|.. ..++.+|+.+.........|+++.-||
T Consensus 2 kvidLFsG~GG~~~G~~~-aG~~~v~a~e~d~~a~~ty~~N~~---------~~~~~~DI~~i~~~~~~~~D~l~ggpP 70 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQK-AGFRIICANEYDKSIWKTYESNHS---------AKLIKGDISKISSDEFPKCDGIIGGPP 70 (331)
T ss_dssp EEEEESCTTCHHHHHHHH-TTCEEEEEEECCTTTHHHHHHHCC---------SEEEESCGGGCCGGGSCCCSEEECCCC
T ss_pred eEEEeCcCccHHHHHHHH-CCCEEEEEEeCCHHHHHHHHHHCC---------CCcccCChhhCCHhhCCcccEEEecCC
Confidence 699999999999998876 578889999999999998888742 157889998765544567999999999
No 280
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=97.87 E-value=3.9e-05 Score=76.41 Aligned_cols=97 Identities=14% Similarity=0.075 Sum_probs=62.9
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEEC
Q 044572 298 YGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVVD 377 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~D 377 (457)
++.+|||+|||+|.++..+++.....+++++|+ +.++. +++++.. +..++++|+.+|+++.. . .||+|++.
T Consensus 184 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~~--~~~~~v~~~~~d~~~~~---p-~~D~v~~~ 254 (348)
T 3lst_A 184 ATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDAP--DVAGRWKVVEGDFLREV---P-HADVHVLK 254 (348)
T ss_dssp SSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCCG--GGTTSEEEEECCTTTCC---C-CCSEEEEE
T ss_pred CCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--ccccccc--CCCCCeEEEecCCCCCC---C-CCcEEEEe
Confidence 578999999999999999998665568999999 45544 3332221 23457999999997432 2 79999883
Q ss_pred CCCCCcc----HHHHHHHHhcCCCCcEEEE
Q 044572 378 PPRKGLD----SSLVHALQSIGSAERKAKS 403 (457)
Q Consensus 378 PPR~Gl~----~~v~~~l~~~~~~~~ivyv 403 (457)
---.... ..+++.+.+.-++++.+++
T Consensus 255 ~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i 284 (348)
T 3lst_A 255 RILHNWGDEDSVRILTNCRRVMPAHGRVLV 284 (348)
T ss_dssp SCGGGSCHHHHHHHHHHHHHTCCTTCEEEE
T ss_pred hhccCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 3211111 2455555554345555544
No 281
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=97.86 E-value=8.9e-06 Score=83.00 Aligned_cols=111 Identities=8% Similarity=-0.030 Sum_probs=67.9
Q ss_pred HHHHHHHHhhCC--CCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcC
Q 044572 286 DILLRKLQKYVP--YGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIE 363 (457)
Q Consensus 286 ~~l~~~i~~~~~--~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~ 363 (457)
..+.+.+.+.+. ++.+|||+|||+|.++..++... .+|+|||+|+.+++.|+++ . ... ....|..+++...
T Consensus 93 ~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~g--~~v~gvD~s~~~~~~a~~~--~--~~~-~~~~~~~~~~~~l 165 (416)
T 4e2x_A 93 AMLARDFLATELTGPDPFIVEIGCNDGIMLRTIQEAG--VRHLGFEPSSGVAAKAREK--G--IRV-RTDFFEKATADDV 165 (416)
T ss_dssp HHHHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHTT--CEEEEECCCHHHHHHHHTT--T--CCE-ECSCCSHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHcC--CcEEEECCCHHHHHHHHHc--C--CCc-ceeeechhhHhhc
Confidence 444455555443 67899999999999999999753 3999999999999988865 1 010 0111222232221
Q ss_pred cccccCCccEEEECCCCCCc--cHHHHHHHHhcCCCCcEEEEe
Q 044572 364 PLSWLVGSDVLVVDPPRKGL--DSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 364 ~~~~~~~~D~vi~DPPR~Gl--~~~v~~~l~~~~~~~~ivyvs 404 (457)
. ...+.||+|++.---.-+ ...+++.+.++-.++++++++
T Consensus 166 ~-~~~~~fD~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~ 207 (416)
T 4e2x_A 166 R-RTEGPANVIYAANTLCHIPYVQSVLEGVDALLAPDGVFVFE 207 (416)
T ss_dssp H-HHHCCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred c-cCCCCEEEEEECChHHhcCCHHHHHHHHHHHcCCCeEEEEE
Confidence 1 113679999875331101 124566666554477777775
No 282
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=97.85 E-value=2.4e-05 Score=79.22 Aligned_cols=102 Identities=13% Similarity=0.036 Sum_probs=66.4
Q ss_pred HHHHHh-hCCCCCeEEEEccc------ccHHHHHHHhhC-CCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccC
Q 044572 289 LRKLQK-YVPYGASVTDLYAG------AGVIGLSLAAAR-KCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADN 360 (457)
Q Consensus 289 ~~~i~~-~~~~~~~vLDl~cG------~G~~sl~lA~~~-~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~ 360 (457)
|+.+.+ +..++.+|||+||| +|..++.+++.. ...+|+|||+|+.+. .. ..+++|+++|+
T Consensus 206 Ye~lL~~l~~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~-------~~-----~~rI~fv~GDa 273 (419)
T 3sso_A 206 YDRHFRDYRNQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH-------VD-----ELRIRTIQGDQ 273 (419)
T ss_dssp HHHHHGGGTTSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG-------GC-----BTTEEEEECCT
T ss_pred HHHHHHhhcCCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh-------hc-----CCCcEEEEecc
Confidence 444433 22357899999999 888888888642 345999999999972 11 25899999999
Q ss_pred CcCccc-----ccCCccEEEECCCCCCccH---HHHHHHHhcCCCCcEEEEe
Q 044572 361 SIEPLS-----WLVGSDVLVVDPPRKGLDS---SLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 361 ~~~~~~-----~~~~~D~vi~DPPR~Gl~~---~v~~~l~~~~~~~~ivyvs 404 (457)
.+.... ..+.||+|+.|=-. ... ..++.+.+.-++++++.++
T Consensus 274 ~dlpf~~~l~~~d~sFDlVisdgsH--~~~d~~~aL~el~rvLKPGGvlVi~ 323 (419)
T 3sso_A 274 NDAEFLDRIARRYGPFDIVIDDGSH--INAHVRTSFAALFPHVRPGGLYVIE 323 (419)
T ss_dssp TCHHHHHHHHHHHCCEEEEEECSCC--CHHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred cccchhhhhhcccCCccEEEECCcc--cchhHHHHHHHHHHhcCCCeEEEEE
Confidence 874211 13689999987321 112 2344444433477777775
No 283
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.83 E-value=2.6e-05 Score=74.73 Aligned_cols=106 Identities=15% Similarity=0.012 Sum_probs=70.7
Q ss_pred CCCeEEEEcccccHHHHHHHhhC-------C-----CCEEEEEeCCH---HHHH-----------HHHHHHhhCC-----
Q 044572 298 YGASVTDLYAGAGVIGLSLAAAR-------K-----CRSVKCVEINK---ESQL-----------SFEKTVSRLP----- 346 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~~-------~-----~~~V~gVE~~~---~av~-----------~A~~Na~~~~----- 346 (457)
+..+|||+|+|+|.-++.++... . ..+++++|..+ +.++ .|+++++...
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 34689999999999887766431 1 14899999887 3333 5666655310
Q ss_pred ------CCCCCcEEEEEccCCcCcccccC----CccEEEECC--CCCC---ccHHHHHHHHhcCCCCcEEEE
Q 044572 347 ------KSVDGNISWHNADNSIEPLSWLV----GSDVLVVDP--PRKG---LDSSLVHALQSIGSAERKAKS 403 (457)
Q Consensus 347 ------~~~~~nv~~~~~d~~~~~~~~~~----~~D~vi~DP--PR~G---l~~~v~~~l~~~~~~~~ivyv 403 (457)
.....+++++.||+.+.+..+.. .||+|++|+ |... -..++++.+.++..+++++..
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~t 211 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT 211 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEE
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEE
Confidence 01235788999999886655432 799999998 5433 245677777776556666554
No 284
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=97.83 E-value=3.8e-05 Score=70.52 Aligned_cols=113 Identities=17% Similarity=0.167 Sum_probs=70.4
Q ss_pred HHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCccc
Q 044572 287 ILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLS 366 (457)
Q Consensus 287 ~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~ 366 (457)
.+++.+... .++.+|||+|||+|.++..++ .+|+|+|+++. +++++.+|+.+...
T Consensus 57 ~~~~~l~~~-~~~~~vLDiG~G~G~~~~~l~-----~~v~~~D~s~~------------------~~~~~~~d~~~~~~- 111 (215)
T 2zfu_A 57 RIARDLRQR-PASLVVADFGCGDCRLASSIR-----NPVHCFDLASL------------------DPRVTVCDMAQVPL- 111 (215)
T ss_dssp HHHHHHHTS-CTTSCEEEETCTTCHHHHHCC-----SCEEEEESSCS------------------STTEEESCTTSCSC-
T ss_pred HHHHHHhcc-CCCCeEEEECCcCCHHHHHhh-----ccEEEEeCCCC------------------CceEEEeccccCCC-
Confidence 344544432 467899999999999998774 38999999987 23578888876432
Q ss_pred ccCCccEEEECCCCCC-ccHHHHHHHHhcCCCCcEEEEeccCCCCCch-hchhhHHHHHHHhcc
Q 044572 367 WLVGSDVLVVDPPRKG-LDSSLVHALQSIGSAERKAKSLSESSSSMVK-EEKRPWILRAKEASV 428 (457)
Q Consensus 367 ~~~~~D~vi~DPPR~G-l~~~v~~~l~~~~~~~~ivyvs~~~~~c~~~-~~~~~~~~~~~~~~~ 428 (457)
..+.||+|++...-.. -...+++.+.+.-.+++.++++. .... .....|..++..++-
T Consensus 112 ~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~~gG~l~i~~----~~~~~~~~~~~~~~l~~~Gf 171 (215)
T 2zfu_A 112 EDESVDVAVFCLSLMGTNIRDFLEEANRVLKPGGLLKVAE----VSSRFEDVRTFLRAVTKLGF 171 (215)
T ss_dssp CTTCEEEEEEESCCCSSCHHHHHHHHHHHEEEEEEEEEEE----CGGGCSCHHHHHHHHHHTTE
T ss_pred CCCCEeEEEEehhccccCHHHHHHHHHHhCCCCeEEEEEE----cCCCCCCHHHHHHHHHHCCC
Confidence 1357999998654321 11345555555434666666641 1111 234566666666653
No 285
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=97.80 E-value=6.2e-05 Score=80.64 Aligned_cols=98 Identities=13% Similarity=-0.002 Sum_probs=66.1
Q ss_pred CCeEEEEcccccHH---HHHHHhhCCC-CEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEE
Q 044572 299 GASVTDLYAGAGVI---GLSLAAARKC-RSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVL 374 (457)
Q Consensus 299 ~~~vLDl~cG~G~~---sl~lA~~~~~-~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~v 374 (457)
+..|||+|||+|.+ ++.+++..+. -+|+|||.|+.|. .|++..+.| +..++|+++++|++++. ..+++|+|
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A~-~a~~~v~~N--~~~dkVtVI~gd~eev~--LPEKVDII 432 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAV-VTLENWQFE--EWGSQVTVVSSDMREWV--APEKADII 432 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHHH-HHHHHHHHH--TTGGGEEEEESCTTTCC--CSSCEEEE
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHHH-HHHHHHHhc--cCCCeEEEEeCcceecc--CCcccCEE
Confidence 35799999999988 5555554321 1689999998654 677777764 34578999999998863 23689999
Q ss_pred EECCCC-CCccH---HHHHHHHhcCCCCcEE
Q 044572 375 VVDPPR-KGLDS---SLVHALQSIGSAERKA 401 (457)
Q Consensus 375 i~DPPR-~Gl~~---~v~~~l~~~~~~~~iv 401 (457)
|...== .++.+ +++.+..+...+++++
T Consensus 433 VSEwMG~fLl~E~mlevL~Ardr~LKPgGim 463 (637)
T 4gqb_A 433 VSELLGSFADNELSPECLDGAQHFLKDDGVS 463 (637)
T ss_dssp ECCCCBTTBGGGCHHHHHHHHGGGEEEEEEE
T ss_pred EEEcCcccccccCCHHHHHHHHHhcCCCcEE
Confidence 988763 23222 4555544443344443
No 286
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=97.72 E-value=0.00011 Score=72.94 Aligned_cols=133 Identities=14% Similarity=0.157 Sum_probs=80.4
Q ss_pred eEEEEcccccHHHHHHHhhCCC--CEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCccccc--CCccEEEE
Q 044572 301 SVTDLYAGAGVIGLSLAAARKC--RSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWL--VGSDVLVV 376 (457)
Q Consensus 301 ~vLDl~cG~G~~sl~lA~~~~~--~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~--~~~D~vi~ 376 (457)
+++|||||.|.+++.+... |. ..|.++|+++.|++..+.|... ..++.+|+.+...... ..+|+++.
T Consensus 5 ~~idLFaG~GG~~~G~~~a-G~~~~~v~a~e~d~~a~~ty~~N~~~--------~~~~~~DI~~~~~~~~~~~~~D~l~g 75 (333)
T 4h0n_A 5 KILELYSGIGGMHCAWKES-GLDGEIVAAVDINTVANSVYKHNFPE--------TNLLNRNIQQLTPQVIKKWNVDTILM 75 (333)
T ss_dssp EEEEETCTTTHHHHHHHHH-TCSEEEEEEECCCHHHHHHHHHHCTT--------SCEECCCGGGCCHHHHHHTTCCEEEE
T ss_pred EEEEECcCccHHHHHHHHc-CCCceEEEEEeCCHHHHHHHHHhCCC--------CceeccccccCCHHHhccCCCCEEEe
Confidence 6999999999999988764 44 5689999999999999888532 2457788877543222 26899999
Q ss_pred CCCCC---------C-------ccHHHHHHHHhcCCCCcEEEEeccCCCCCchhchhhHHHHHHHhccccccccC-CCCC
Q 044572 377 DPPRK---------G-------LDSSLVHALQSIGSAERKAKSLSESSSSMVKEEKRPWILRAKEASVQIGSKTN-SENQ 439 (457)
Q Consensus 377 DPPR~---------G-------l~~~v~~~l~~~~~~~~ivyvs~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 439 (457)
.||-. | +-.++++.+..++. .+++.++--...-+ ....+.++..+...+..+..... ..+.
T Consensus 76 gpPCQ~fS~ag~~~~~~d~r~~L~~~~~r~i~~~~~-P~~~vlENV~gl~~-~~~~~~i~~~l~~~GY~v~~~vl~a~~~ 153 (333)
T 4h0n_A 76 SPPCQPFTRNGKYLDDNDPRTNSFLYLIGILDQLDN-VDYILMENVKGFEN-STVRNLFIDKLKECNFIYQEFLLCPSTV 153 (333)
T ss_dssp CCCCCCSEETTEECCTTCTTSCCHHHHHHHGGGCTT-CCEEEEEECTTGGG-SHHHHHHHHHHHHTTEEEEEEEECTTTT
T ss_pred cCCCcchhhhhhccCCcCcccccHHHHHHHHHHhcC-CCEEEEecchhhhh-hhHHHHHHHHHHhCCCeEEEEEecHHHc
Confidence 99932 2 22245555555532 45666651111111 11234555555554444432222 1334
Q ss_pred CCCCc
Q 044572 440 SLPQT 444 (457)
Q Consensus 440 ~~p~~ 444 (457)
..||.
T Consensus 154 GvPQ~ 158 (333)
T 4h0n_A 154 GVPNS 158 (333)
T ss_dssp TCSCC
T ss_pred CCCcc
Confidence 47774
No 287
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=97.68 E-value=7.6e-05 Score=74.36 Aligned_cols=67 Identities=10% Similarity=0.099 Sum_probs=53.1
Q ss_pred CCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEE
Q 044572 297 PYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVV 376 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~ 376 (457)
.++.+|||+|||+|.++..+++.....+|+++|+ +.+++.|++ ..+++|+.+|+++.. ..||+|++
T Consensus 187 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---------~~~v~~~~~d~~~~~----p~~D~v~~ 252 (352)
T 1fp2_A 187 DGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSG---------SNNLTYVGGDMFTSI----PNADAVLL 252 (352)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC---------BTTEEEEECCTTTCC----CCCSEEEE
T ss_pred ccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhccc---------CCCcEEEeccccCCC----CCccEEEe
Confidence 3568999999999999999998654458999999 999876653 135899999987632 24999988
Q ss_pred C
Q 044572 377 D 377 (457)
Q Consensus 377 D 377 (457)
.
T Consensus 253 ~ 253 (352)
T 1fp2_A 253 K 253 (352)
T ss_dssp E
T ss_pred e
Confidence 4
No 288
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=97.64 E-value=0.00021 Score=71.83 Aligned_cols=66 Identities=11% Similarity=0.075 Sum_probs=52.0
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEEC
Q 044572 298 YGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVVD 377 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~D 377 (457)
+..+|||+|||+|.++..+++.....+++++|+ +.+++.|++ ..+++|+.+|+++... .. |+|++.
T Consensus 203 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---------~~~v~~~~~d~~~~~p---~~-D~v~~~ 268 (368)
T 3reo_A 203 GLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPA---------FSGVEHLGGDMFDGVP---KG-DAIFIK 268 (368)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC---------CTTEEEEECCTTTCCC---CC-SEEEEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhh---------cCCCEEEecCCCCCCC---CC-CEEEEe
Confidence 468999999999999999998765568999999 888765542 1579999999986322 23 998873
No 289
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=97.64 E-value=8.2e-05 Score=72.62 Aligned_cols=73 Identities=14% Similarity=-0.007 Sum_probs=57.6
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCE--EEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCccccc---CCcc
Q 044572 298 YGASVTDLYAGAGVIGLSLAAARKCRS--VKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWL---VGSD 372 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~~~~~~--V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~---~~~D 372 (457)
..-+++|||||.|++++.+.. .|+.. |.++|+++.|++..+.|.. +..++.+|+.+...... ..+|
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~-aG~~~~~v~a~E~d~~a~~ty~~N~~--------~~~~~~~DI~~i~~~~i~~~~~~D 85 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKD-LGIQVDRYIASEVCEDSITVGMVRHQ--------GKIMYVGDVRSVTQKHIQEWGPFD 85 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHH-TTBCEEEEEEECCCHHHHHHHHHHTT--------TCEEEECCGGGCCHHHHHHTCCCS
T ss_pred CCCEEEEeCcCccHHHHHHHH-CCCccceEEEEECCHHHHHHHHHhCC--------CCceeCCChHHccHHHhcccCCcC
Confidence 456899999999999998886 56666 7999999999998887742 23578899987643221 3689
Q ss_pred EEEECCC
Q 044572 373 VLVVDPP 379 (457)
Q Consensus 373 ~vi~DPP 379 (457)
+++..||
T Consensus 86 ll~ggpP 92 (295)
T 2qrv_A 86 LVIGGSP 92 (295)
T ss_dssp EEEECCC
T ss_pred EEEecCC
Confidence 9999999
No 290
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.54 E-value=0.00045 Score=69.01 Aligned_cols=107 Identities=14% Similarity=0.110 Sum_probs=74.7
Q ss_pred CCCHHHHHHHHHHHHhhCC-----CCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcE
Q 044572 279 QANTRAFDILLRKLQKYVP-----YGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNI 353 (457)
Q Consensus 279 Q~n~~~~~~l~~~i~~~~~-----~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv 353 (457)
-.|...++.+++.+.- .+ ++..|||+|.|.|++|..|+...++++|++||+++..+...++.. . .+|+
T Consensus 35 L~d~~i~~~Iv~~~~l-~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~-----~~~l 107 (353)
T 1i4w_A 35 LWNPTVYNKIFDKLDL-TKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-E-----GSPL 107 (353)
T ss_dssp BCCHHHHHHHHHHHCG-GGTCCCTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-T-----TSSC
T ss_pred cCCHHHHHHHHHhccC-CcccCcCCCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-c-----CCCE
Confidence 3466666666665431 11 258899999999999999997644679999999999998888765 2 2578
Q ss_pred EEEEccCCcCc--ccccCC----------------ccEEEECCCCCCccHHHHHHHH
Q 044572 354 SWHNADNSIEP--LSWLVG----------------SDVLVVDPPRKGLDSSLVHALQ 392 (457)
Q Consensus 354 ~~~~~d~~~~~--~~~~~~----------------~D~vi~DPPR~Gl~~~v~~~l~ 392 (457)
+++.+|+.++- ..+... .-.||.|-|+..-.+-+.+.|.
T Consensus 108 ~ii~~D~l~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~vvaNLPYnIstpil~~ll~ 164 (353)
T 1i4w_A 108 QILKRDPYDWSTYSNLIDEERIFVPEVQSSDHINDKFLTVANVTGEGSEGLIMQWLS 164 (353)
T ss_dssp EEECSCTTCHHHHHHHTTTTCSSCCCCCCTTSEEEEEEEEEECCSTTHHHHHHHHHH
T ss_pred EEEECCccchhhHHHhhcccccccccccccccCCCceEEEEECCCchHHHHHHHHHH
Confidence 99999997642 111111 1179999999765554555444
No 291
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=97.53 E-value=0.00027 Score=70.93 Aligned_cols=65 Identities=14% Similarity=0.066 Sum_probs=51.6
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEE
Q 044572 298 YGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVV 376 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~ 376 (457)
+..+|||+|||+|.++..+++.....+++++|+ +.+++.|++ ..+++|+.+|+++... .. |+|++
T Consensus 201 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---------~~~v~~~~~D~~~~~p---~~-D~v~~ 265 (364)
T 3p9c_A 201 GLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQ---------FPGVTHVGGDMFKEVP---SG-DTILM 265 (364)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC---------CTTEEEEECCTTTCCC---CC-SEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhh---------cCCeEEEeCCcCCCCC---CC-CEEEe
Confidence 568999999999999999998765568999999 888765542 1579999999986322 23 99987
No 292
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=97.53 E-value=0.00011 Score=72.80 Aligned_cols=75 Identities=12% Similarity=0.221 Sum_probs=57.5
Q ss_pred CCeEEEEcccccHHHHHHHhhCC--CCEE-EEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCccccc--CCccE
Q 044572 299 GASVTDLYAGAGVIGLSLAAARK--CRSV-KCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWL--VGSDV 373 (457)
Q Consensus 299 ~~~vLDl~cG~G~~sl~lA~~~~--~~~V-~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~--~~~D~ 373 (457)
.-+++|||||.|.+++.+.. .| +..| .++|+++.|++..+.|... .++++|+.+...... ..+|+
T Consensus 10 ~~~vidLFaG~GG~~~G~~~-aG~~~~~v~~a~e~d~~a~~ty~~N~~~---------~~~~~DI~~~~~~~i~~~~~Di 79 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYER-SSININATFIPFDINEIANKIYSKNFKE---------EVQVKNLDSISIKQIESLNCNT 79 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHH-SSCCCCEEEEEECCCHHHHHHHHHHHCC---------CCBCCCTTTCCHHHHHHTCCCE
T ss_pred CCEEEEECCChhHHHHHHHH-cCCCceEEEEEEECCHHHHHHHHHHCCC---------CcccCChhhcCHHHhccCCCCE
Confidence 45899999999999999886 45 3677 8999999999999998642 156788877543222 26899
Q ss_pred EEECCCCCCc
Q 044572 374 LVVDPPRKGL 383 (457)
Q Consensus 374 vi~DPPR~Gl 383 (457)
++..||-.+.
T Consensus 80 l~ggpPCQ~f 89 (327)
T 3qv2_A 80 WFMSPPCQPY 89 (327)
T ss_dssp EEECCCCTTC
T ss_pred EEecCCccCc
Confidence 9999995444
No 293
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=97.53 E-value=0.00022 Score=71.54 Aligned_cols=92 Identities=9% Similarity=-0.030 Sum_probs=62.6
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEEC
Q 044572 298 YGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVVD 377 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~D 377 (457)
++.+|||+|||+|.++..+++.....+++++|+ +.+++.|++ ..+++++.+|+++.. ..||+|++.
T Consensus 209 ~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~---------~~~v~~~~~d~~~~~----~~~D~v~~~ 274 (372)
T 1fp1_D 209 GISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPP---------LSGIEHVGGDMFASV----PQGDAMILK 274 (372)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC---------CTTEEEEECCTTTCC----CCEEEEEEE
T ss_pred CCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhh---------cCCCEEEeCCcccCC----CCCCEEEEe
Confidence 568999999999999999998765458999999 888876542 146999999997632 238999884
Q ss_pred CCCCCcc-H---HHHHHHHhcCCCCcEEEE
Q 044572 378 PPRKGLD-S---SLVHALQSIGSAERKAKS 403 (457)
Q Consensus 378 PPR~Gl~-~---~v~~~l~~~~~~~~ivyv 403 (457)
---.-.. . .+++.+.+.-++++.+++
T Consensus 275 ~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i 304 (372)
T 1fp1_D 275 AVCHNWSDEKCIEFLSNCHKALSPNGKVII 304 (372)
T ss_dssp SSGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred cccccCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 3211111 1 344555443335555554
No 294
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=97.47 E-value=0.00021 Score=71.32 Aligned_cols=68 Identities=10% Similarity=0.042 Sum_probs=53.0
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEEC
Q 044572 298 YGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVVD 377 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~D 377 (457)
++.+|||+|||+|.++..+++.....+++++|+ +.+++.|++ ..+++++.+|+++.. ..||+|++.
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---------~~~v~~~~~d~~~~~----~~~D~v~~~ 258 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG---------NENLNFVGGDMFKSI----PSADAVLLK 258 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC---------CSSEEEEECCTTTCC----CCCSEEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc---------CCCcEEEeCccCCCC----CCceEEEEc
Confidence 568999999999999999998754458999999 788765442 145999999997621 359999885
Q ss_pred CC
Q 044572 378 PP 379 (457)
Q Consensus 378 PP 379 (457)
-.
T Consensus 259 ~v 260 (358)
T 1zg3_A 259 WV 260 (358)
T ss_dssp SC
T ss_pred cc
Confidence 43
No 295
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.35 E-value=0.00016 Score=71.34 Aligned_cols=87 Identities=13% Similarity=-0.020 Sum_probs=65.2
Q ss_pred HHHHHHHhhCC--CCCeEEEEcccccHHHHHHHhhCC-CCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcC
Q 044572 287 ILLRKLQKYVP--YGASVTDLYAGAGVIGLSLAAARK-CRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIE 363 (457)
Q Consensus 287 ~l~~~i~~~~~--~~~~vLDl~cG~G~~sl~lA~~~~-~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~ 363 (457)
.|++.+++++. +|..++|+.+|.|.-+..++...+ ..+|+|+|.+++|++.|+ ++ ..+++++++++..+.
T Consensus 44 VLl~Evl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL------~~~Rv~lv~~nF~~l 116 (347)
T 3tka_A 44 VLLDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI------DDPRFSIIHGPFSAL 116 (347)
T ss_dssp TTTHHHHHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC------CCTTEEEEESCGGGH
T ss_pred ccHHHHHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh------cCCcEEEEeCCHHHH
Confidence 45566666653 689999999999999999997643 469999999999999884 22 136899999987654
Q ss_pred cccc-----cCCccEEEECCCC
Q 044572 364 PLSW-----LVGSDVLVVDPPR 380 (457)
Q Consensus 364 ~~~~-----~~~~D~vi~DPPR 380 (457)
...+ .+.+|.|++|-..
T Consensus 117 ~~~L~~~g~~~~vDgILfDLGV 138 (347)
T 3tka_A 117 GEYVAERDLIGKIDGILLDLGV 138 (347)
T ss_dssp HHHHHHTTCTTCEEEEEEECSC
T ss_pred HHHHHhcCCCCcccEEEECCcc
Confidence 2211 1258999998774
No 296
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=97.25 E-value=0.00025 Score=73.76 Aligned_cols=75 Identities=24% Similarity=0.220 Sum_probs=57.2
Q ss_pred CeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcc--------------
Q 044572 300 ASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPL-------------- 365 (457)
Q Consensus 300 ~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~-------------- 365 (457)
-+++|||||.|++++-+.. .|+..|.++|+++.|++..+.|... ..+..++++|+.+...
T Consensus 89 ~~viDLFaG~GGlslG~~~-aG~~~v~avE~d~~A~~ty~~N~~~-----~p~~~~~~~DI~~i~~~~~~~~~~~~~~~~ 162 (482)
T 3me5_A 89 FRFIDLFAGIGGIRRGFES-IGGQCVFTSEWNKHAVRTYKANHYC-----DPATHHFNEDIRDITLSHQEGVSDEAAAEH 162 (482)
T ss_dssp EEEEEESCTTSHHHHHHHT-TTEEEEEEECCCHHHHHHHHHHSCC-----CTTTCEEESCTHHHHCTTCTTSCHHHHHHH
T ss_pred ceEEEecCCccHHHHHHHH-CCCEEEEEEeCCHHHHHHHHHhccc-----CCCcceeccchhhhhhccccccchhhHHhh
Confidence 4799999999999999876 5677799999999999998888532 1233567788865431
Q ss_pred --cccCCccEEEECCCC
Q 044572 366 --SWLVGSDVLVVDPPR 380 (457)
Q Consensus 366 --~~~~~~D~vi~DPPR 380 (457)
.....+|+++.-||-
T Consensus 163 i~~~~~~~Dvl~gGpPC 179 (482)
T 3me5_A 163 IRQHIPEHDVLLAGFPC 179 (482)
T ss_dssp HHHHSCCCSEEEEECCC
T ss_pred hhhcCCCCCEEEecCCC
Confidence 112468999999993
No 297
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.20 E-value=0.00051 Score=68.71 Aligned_cols=94 Identities=15% Similarity=0.100 Sum_probs=62.9
Q ss_pred CCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEE
Q 044572 296 VPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLV 375 (457)
Q Consensus 296 ~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi 375 (457)
+.+|.++|||||..|.++..++++++ +|+|||..+-. ..+.. ..+|+++++|++..... ...+|+|+
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~rg~--~V~aVD~~~l~-----~~l~~-----~~~V~~~~~d~~~~~~~-~~~~D~vv 275 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKRNM--WVYSVDNGPMA-----QSLMD-----TGQVTWLREDGFKFRPT-RSNISWMV 275 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHTTC--EEEEECSSCCC-----HHHHT-----TTCEEEECSCTTTCCCC-SSCEEEEE
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHCCC--EEEEEEhhhcC-----hhhcc-----CCCeEEEeCccccccCC-CCCcCEEE
Confidence 45799999999999999999998643 99999976421 11222 25799999999886543 25799999
Q ss_pred ECCCC--CCccHHHHHHHHhcCCCCcEEEE
Q 044572 376 VDPPR--KGLDSSLVHALQSIGSAERKAKS 403 (457)
Q Consensus 376 ~DPPR--~Gl~~~v~~~l~~~~~~~~ivyv 403 (457)
.|=-- .+...-+.+.+... ..++.|+.
T Consensus 276 sDm~~~p~~~~~l~~~wl~~~-~~~~aI~~ 304 (375)
T 4auk_A 276 CDMVEKPAKVAALMAQWLVNG-WCRETIFN 304 (375)
T ss_dssp ECCSSCHHHHHHHHHHHHHTT-SCSEEEEE
T ss_pred EcCCCChHHhHHHHHHHHhcc-ccceEEEE
Confidence 98642 12222233334333 24555554
No 298
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=97.02 E-value=0.00067 Score=66.94 Aligned_cols=47 Identities=17% Similarity=0.171 Sum_probs=41.5
Q ss_pred CCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhh
Q 044572 296 VPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSR 344 (457)
Q Consensus 296 ~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~ 344 (457)
..+|+.|||.|||+|+.++.+...+ ++.+|+|+++.+++.|+++++.
T Consensus 250 ~~~~~~VlDpF~GsGtt~~aa~~~g--r~~ig~e~~~~~~~~~~~r~~~ 296 (323)
T 1boo_A 250 TEPDDLVVDIFGGSNTTGLVAERES--RKWISFEMKPEYVAASAFRFLD 296 (323)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHTT--CEEEEEESCHHHHHHHHGGGSC
T ss_pred CCCCCEEEECCCCCCHHHHHHHHcC--CCEEEEeCCHHHHHHHHHHHHh
Confidence 3579999999999999999888753 5999999999999999988765
No 299
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=96.95 E-value=0.0021 Score=59.95 Aligned_cols=89 Identities=18% Similarity=0.043 Sum_probs=61.2
Q ss_pred HHHHHHHHHHhh-CCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEc-cCC
Q 044572 284 AFDILLRKLQKY-VPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNA-DNS 361 (457)
Q Consensus 284 ~~~~l~~~i~~~-~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~-d~~ 361 (457)
.+-+|.+....+ +.++.+||||||+.|.++..++...++++|+|+|+-..-.+.=+ ..+. -+-+.|+|+++ |++
T Consensus 63 a~~KL~ei~ek~~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~-~~~s---~gwn~v~fk~gvDv~ 138 (267)
T 3p8z_A 63 GSAKLQWFVERNMVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPV-PMST---YGWNIVKLMSGKDVF 138 (267)
T ss_dssp HHHHHHHHHHTTSSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCC-CCCC---TTTTSEEEECSCCGG
T ss_pred HHHHHHHHHHhcCCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcc-hhhh---cCcCceEEEecccee
Confidence 334554444333 45788999999999999999998888899999999765431000 0011 12346899999 986
Q ss_pred cCcccccCCccEEEECCC
Q 044572 362 IEPLSWLVGSDVLVVDPP 379 (457)
Q Consensus 362 ~~~~~~~~~~D~vi~DPP 379 (457)
.... ..+|+|+.|--
T Consensus 139 ~~~~---~~~DtllcDIg 153 (267)
T 3p8z_A 139 YLPP---EKCDTLLCDIG 153 (267)
T ss_dssp GCCC---CCCSEEEECCC
T ss_pred ecCC---ccccEEEEecC
Confidence 5432 46999999973
No 300
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=96.91 E-value=0.0011 Score=65.35 Aligned_cols=47 Identities=21% Similarity=0.280 Sum_probs=40.3
Q ss_pred CCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCH---HHHHHHHHHHhh
Q 044572 296 VPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINK---ESQLSFEKTVSR 344 (457)
Q Consensus 296 ~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~---~av~~A~~Na~~ 344 (457)
..+|+.|||.|||+|+.++.+.... ++.+|+|+++ ..++.|+++++.
T Consensus 240 ~~~~~~vlDpF~GsGtt~~aa~~~~--r~~ig~e~~~~~~~~~~~~~~Rl~~ 289 (319)
T 1eg2_A 240 SHPGSTVLDFFAGSGVTARVAIQEG--RNSICTDAAPVFKEYYQKQLTFLQD 289 (319)
T ss_dssp SCTTCEEEETTCTTCHHHHHHHHHT--CEEEEEESSTHHHHHHHHHHHHC--
T ss_pred CCCCCEEEecCCCCCHHHHHHHHcC--CcEEEEECCccHHHHHHHHHHHHHH
Confidence 3479999999999999999988763 5999999999 999999988765
No 301
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=96.75 E-value=0.0022 Score=61.95 Aligned_cols=118 Identities=9% Similarity=-0.019 Sum_probs=78.3
Q ss_pred HHHHHHHHHHHHhhC--CCCCeEEEEcccccHHHHHHHhhC-----CCCEEEEEeCCH----------------------
Q 044572 282 TRAFDILLRKLQKYV--PYGASVTDLYAGAGVIGLSLAAAR-----KCRSVKCVEINK---------------------- 332 (457)
Q Consensus 282 ~~~~~~l~~~i~~~~--~~~~~vLDl~cG~G~~sl~lA~~~-----~~~~V~gVE~~~---------------------- 332 (457)
......|+..+.... .....||++|+..|.-++.+|... ..++|+++|..+
T Consensus 88 ~~r~~~L~~l~~~v~~~~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~ 167 (282)
T 2wk1_A 88 IKRLENIRQCVEDVIGNNVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRN 167 (282)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGH
T ss_pred HHHHHHHHHHHHHHHhcCCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCccccccccccccccccccc
Confidence 344444444443322 235689999999999998887531 135899999742
Q ss_pred ----HHHHHHHHHHhhCCCCC-CCcEEEEEccCCcCccccc-CCccEEEECCCCCCccH---HHHHHHHhcCCCCcEEEE
Q 044572 333 ----ESQLSFEKTVSRLPKSV-DGNISWHNADNSIEPLSWL-VGSDVLVVDPPRKGLDS---SLVHALQSIGSAERKAKS 403 (457)
Q Consensus 333 ----~av~~A~~Na~~~~~~~-~~nv~~~~~d~~~~~~~~~-~~~D~vi~DPPR~Gl~~---~v~~~l~~~~~~~~ivyv 403 (457)
..++.+++|++..+ . .++|+++.||+.+.+.... ..+|+|++|=- ... ..++.+...-.++++|.+
T Consensus 168 ~~~~~~~~~ar~n~~~~g--l~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD---~y~~~~~~Le~~~p~L~pGGiIv~ 242 (282)
T 2wk1_A 168 SVLAVSEEEVRRNFRNYD--LLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGD---LYESTWDTLTNLYPKVSVGGYVIV 242 (282)
T ss_dssp HHHCCCHHHHHHHHHHTT--CCSTTEEEEESCHHHHSTTCCCCCEEEEEECCC---SHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred ccchhHHHHHHHHHHHcC--CCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCC---ccccHHHHHHHHHhhcCCCEEEEE
Confidence 14677899998843 3 3789999999987666543 57999999953 222 334444444347777776
Q ss_pred e
Q 044572 404 L 404 (457)
Q Consensus 404 s 404 (457)
-
T Consensus 243 D 243 (282)
T 2wk1_A 243 D 243 (282)
T ss_dssp S
T ss_pred c
Confidence 3
No 302
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=96.74 E-value=0.00086 Score=59.34 Aligned_cols=86 Identities=9% Similarity=-0.066 Sum_probs=57.9
Q ss_pred CCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCccc--ccCCccE
Q 044572 296 VPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLS--WLVGSDV 373 (457)
Q Consensus 296 ~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~--~~~~~D~ 373 (457)
+.+|.+|||++||. ++||+++.|++.|++++.. +++++++|+.+.... ..+.||+
T Consensus 10 ~~~g~~vL~~~~g~----------------v~vD~s~~ml~~a~~~~~~-------~~~~~~~d~~~~~~~~~~~~~fD~ 66 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS----------------SPVEALKGLVDKLQALTGN-------EGRVSVENIKQLLQSAHKESSFDI 66 (176)
T ss_dssp CCTTSEEEEEECTT----------------SCHHHHHHHHHHHHHHTTT-------TSEEEEEEGGGGGGGCCCSSCEEE
T ss_pred CCCCCEEEEecCCc----------------eeeeCCHHHHHHHHHhccc-------CcEEEEechhcCccccCCCCCEeE
Confidence 45789999999986 2399999999999987532 479999999875431 2357999
Q ss_pred EEECCCCCC---ccHHHHHHHHhcCCCCcEEEEe
Q 044572 374 LVVDPPRKG---LDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 374 vi~DPPR~G---l~~~v~~~l~~~~~~~~ivyvs 404 (457)
|+..=--.- -...+++.+.+.-.+++.++++
T Consensus 67 V~~~~~l~~~~~~~~~~l~~~~r~LkpgG~l~~~ 100 (176)
T 2ld4_A 67 ILSGLVPGSTTLHSAEILAEIARILRPGGCLFLK 100 (176)
T ss_dssp EEECCSTTCCCCCCHHHHHHHHHHEEEEEEEEEE
T ss_pred EEECChhhhcccCHHHHHHHHHHHCCCCEEEEEE
Confidence 998421100 0145666665544466666664
No 303
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=96.72 E-value=0.004 Score=62.47 Aligned_cols=105 Identities=15% Similarity=0.000 Sum_probs=73.1
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCC-C----CCCcEEEEEccCCcCcccc---cC
Q 044572 298 YGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPK-S----VDGNISWHNADNSIEPLSW---LV 369 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~-~----~~~nv~~~~~d~~~~~~~~---~~ 369 (457)
+.++||=+|.|.|.....+.+. ...+|+.||++++.++.+++-...... . ..++++++.+|+.+++.+. .+
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh-~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~ 283 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKL-KPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 283 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTT-CCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCeEEEECCCcHHHHHHHHhc-CCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccC
Confidence 4689999999999999998875 458999999999999999986422100 0 1246899999998876532 25
Q ss_pred CccEEEECCCC---C----Ccc-----HHHHHHHHhcCCCCcEEEE
Q 044572 370 GSDVLVVDPPR---K----GLD-----SSLVHALQSIGSAERKAKS 403 (457)
Q Consensus 370 ~~D~vi~DPPR---~----Gl~-----~~v~~~l~~~~~~~~ivyv 403 (457)
+||+||+|.+- . |.. .+..+.+.+.-.+++++..
T Consensus 284 ~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~ 329 (381)
T 3c6k_A 284 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFT 329 (381)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred ceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEE
Confidence 79999999532 1 222 2445555554446777665
No 304
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=96.55 E-value=0.0042 Score=59.79 Aligned_cols=91 Identities=15% Similarity=0.122 Sum_probs=59.9
Q ss_pred HHHHHHHHHHh-hCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEc-cCC
Q 044572 284 AFDILLRKLQK-YVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNA-DNS 361 (457)
Q Consensus 284 ~~~~l~~~i~~-~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~-d~~ 361 (457)
.+-+|...... .+.++.+||||||+.|.++..++...++++|+|+|+-..--+.=+ ..+.++ -..|.|+.+ |+.
T Consensus 79 ~~~KL~ei~~~~~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~-~~~ql~---w~lV~~~~~~Dv~ 154 (321)
T 3lkz_A 79 GTAKLRWLVERRFLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQ-LVQSYG---WNIVTMKSGVDVF 154 (321)
T ss_dssp HHHHHHHHHHTTSCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCC-CCCBTT---GGGEEEECSCCTT
T ss_pred HHHHHHHHHHhcCCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcc-hhhhcC---CcceEEEeccCHh
Confidence 33444444333 245778999999999999999998888889999999765221000 001111 123788888 775
Q ss_pred cCcccccCCccEEEECCCCC
Q 044572 362 IEPLSWLVGSDVLVVDPPRK 381 (457)
Q Consensus 362 ~~~~~~~~~~D~vi~DPPR~ 381 (457)
.... ..+|+|++|=-.+
T Consensus 155 ~l~~---~~~D~ivcDigeS 171 (321)
T 3lkz_A 155 YRPS---ECCDTLLCDIGES 171 (321)
T ss_dssp SSCC---CCCSEEEECCCCC
T ss_pred hCCC---CCCCEEEEECccC
Confidence 5432 4699999998744
No 305
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=96.53 E-value=0.0059 Score=62.16 Aligned_cols=64 Identities=14% Similarity=0.130 Sum_probs=50.4
Q ss_pred CCCCeEEEEcccccHHHHHHH-hhCC-CCEEEEEeCCHHHHHHHHHHHhhCCCCCC-CcEEEEEccC
Q 044572 297 PYGASVTDLYAGAGVIGLSLA-AARK-CRSVKCVEINKESQLSFEKTVSRLPKSVD-GNISWHNADN 360 (457)
Q Consensus 297 ~~~~~vLDl~cG~G~~sl~lA-~~~~-~~~V~gVE~~~~av~~A~~Na~~~~~~~~-~nv~~~~~d~ 360 (457)
.++..|+|+||+.|.+++.++ +..+ .++|+++|-++.+.+..++|++...|+.. .|++++..-+
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~al 291 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGA 291 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEE
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeEE
Confidence 468899999999999999988 4443 36999999999999999999987211334 6777776444
No 306
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=96.40 E-value=0.0012 Score=63.38 Aligned_cols=93 Identities=15% Similarity=0.041 Sum_probs=57.4
Q ss_pred HHHHHHHHHHhh-CCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEc--cC
Q 044572 284 AFDILLRKLQKY-VPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNA--DN 360 (457)
Q Consensus 284 ~~~~l~~~i~~~-~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~--d~ 360 (457)
.+-+|.+...++ +.++.+|||||||.|.++..++...++.+|+|+|+...+...+... + ....++..... |+
T Consensus 75 AAfKL~ei~eK~~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~-~----~~g~~ii~~~~~~dv 149 (282)
T 3gcz_A 75 GSAKLRWMEERGYVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMR-T----TLGWNLIRFKDKTDV 149 (282)
T ss_dssp HHHHHHHHHHTTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCC-C----BTTGGGEEEECSCCG
T ss_pred HHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccccc-c----cCCCceEEeeCCcch
Confidence 445665555443 3578899999999999999998766778999999986642222110 0 01123333333 32
Q ss_pred CcCcccccCCccEEEECC-CCCCcc
Q 044572 361 SIEPLSWLVGSDVLVVDP-PRKGLD 384 (457)
Q Consensus 361 ~~~~~~~~~~~D~vi~DP-PR~Gl~ 384 (457)
..+ ....+|+|+.|= |-.|..
T Consensus 150 ~~l---~~~~~DvVLSDmApnsG~~ 171 (282)
T 3gcz_A 150 FNM---EVIPGDTLLCDIGESSPSI 171 (282)
T ss_dssp GGS---CCCCCSEEEECCCCCCSCH
T ss_pred hhc---CCCCcCEEEecCccCCCCh
Confidence 221 125799999995 336653
No 307
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=96.29 E-value=0.0017 Score=62.21 Aligned_cols=94 Identities=21% Similarity=0.143 Sum_probs=57.2
Q ss_pred HHHHHHHHHHhh-CCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCc
Q 044572 284 AFDILLRKLQKY-VPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSI 362 (457)
Q Consensus 284 ~~~~l~~~i~~~-~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~ 362 (457)
.+-+|.+...+. +.++.+|||||||.|.++..++...++.+|+|+|+..+.... ... ......++..+.+++..
T Consensus 59 aA~KL~ei~ek~~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~----pi~-~~~~g~~ii~~~~~~dv 133 (277)
T 3evf_A 59 GTAKLRWFHERGYVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEK----PMN-VQSLGWNIITFKDKTDI 133 (277)
T ss_dssp HHHHHHHHHHTTSSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCC----CCC-CCBTTGGGEEEECSCCT
T ss_pred HHHHHHHHHHhCCCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCccc----ccc-cCcCCCCeEEEecccee
Confidence 444555544442 346789999999999999998876567789999998543100 000 00001155556666532
Q ss_pred CcccccCCccEEEECC-CCCCc
Q 044572 363 EPLSWLVGSDVLVVDP-PRKGL 383 (457)
Q Consensus 363 ~~~~~~~~~D~vi~DP-PR~Gl 383 (457)
... ....+|+|+.|= |-.|.
T Consensus 134 ~~l-~~~~~DlVlsD~apnsG~ 154 (277)
T 3evf_A 134 HRL-EPVKCDTLLCDIGESSSS 154 (277)
T ss_dssp TTS-CCCCCSEEEECCCCCCSC
T ss_pred hhc-CCCCccEEEecCccCcCc
Confidence 111 125799999996 33565
No 308
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=95.89 E-value=0.0067 Score=66.91 Aligned_cols=43 Identities=23% Similarity=0.301 Sum_probs=35.4
Q ss_pred CeEEEEcccccHHHHHHHhhCC-----CCEEEEEeCCHHHHHHHHHHH
Q 044572 300 ASVTDLYAGAGVIGLSLAAARK-----CRSVKCVEINKESQLSFEKTV 342 (457)
Q Consensus 300 ~~vLDl~cG~G~~sl~lA~~~~-----~~~V~gVE~~~~av~~A~~Na 342 (457)
-+|||||||.|++++-+...++ +.-|.+||+++.|++.-+.|.
T Consensus 213 ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nh 260 (784)
T 4ft4_B 213 ATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNH 260 (784)
T ss_dssp EEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHC
T ss_pred CeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHC
Confidence 4799999999999887765321 457899999999999998884
No 309
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=95.84 E-value=0.0086 Score=67.30 Aligned_cols=72 Identities=14% Similarity=0.179 Sum_probs=52.2
Q ss_pred CeEEEEcccccHHHHHHHhhCCC-CEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcC------------ccc
Q 044572 300 ASVTDLYAGAGVIGLSLAAARKC-RSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIE------------PLS 366 (457)
Q Consensus 300 ~~vLDl~cG~G~~sl~lA~~~~~-~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~------------~~~ 366 (457)
-+++|||||.|++++-+.. +|. ..|.++|+++.|++..+.|.. +..++.+|+.++ ...
T Consensus 541 l~~iDLFaG~GGlslGl~~-AG~~~vv~avEid~~A~~ty~~N~p--------~~~~~~~DI~~l~~~~~~~di~~~~~~ 611 (1002)
T 3swr_A 541 LRTLDVFSGCGGLSEGFHQ-AGISDTLWAIEMWDPAAQAFRLNNP--------GSTVFTEDCNILLKLVMAGETTNSRGQ 611 (1002)
T ss_dssp EEEEEESCTTSHHHHHHHH-HTSEEEEEEECSSHHHHHHHHHHCT--------TSEEECSCHHHHHHHHHHTCSBCTTCC
T ss_pred CeEEEeccCccHHHHHHHH-CCCCceEEEEECCHHHHHHHHHhCC--------CCccccccHHHHhhhccchhhhhhhhh
Confidence 3799999999999998876 455 568899999999998888742 235566664321 111
Q ss_pred -c--cCCccEEEECCCC
Q 044572 367 -W--LVGSDVLVVDPPR 380 (457)
Q Consensus 367 -~--~~~~D~vi~DPPR 380 (457)
+ ...+|+|+.-||-
T Consensus 612 ~lp~~~~vDll~GGpPC 628 (1002)
T 3swr_A 612 RLPQKGDVEMLCGGPPC 628 (1002)
T ss_dssp BCCCTTTCSEEEECCCC
T ss_pred hcccCCCeeEEEEcCCC
Confidence 1 1358999999993
No 310
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=95.45 E-value=0.015 Score=59.08 Aligned_cols=44 Identities=20% Similarity=0.133 Sum_probs=36.3
Q ss_pred CeEEEEcccccHHHHHHHhhCC-CCE----EEEEeCCHHHHHHHHHHHh
Q 044572 300 ASVTDLYAGAGVIGLSLAAARK-CRS----VKCVEINKESQLSFEKTVS 343 (457)
Q Consensus 300 ~~vLDl~cG~G~~sl~lA~~~~-~~~----V~gVE~~~~av~~A~~Na~ 343 (457)
-+|+|||||.|++++.+-..+. ..- |.++|+++.|++.-+.|..
T Consensus 11 lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~ 59 (403)
T 4dkj_A 11 IKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHS 59 (403)
T ss_dssp EEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHC
T ss_pred ceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcC
Confidence 4799999999999988876431 234 9999999999999999875
No 311
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=95.11 E-value=0.022 Score=65.76 Aligned_cols=73 Identities=12% Similarity=0.170 Sum_probs=52.3
Q ss_pred CCeEEEEcccccHHHHHHHhhCCC-CEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCc------------c
Q 044572 299 GASVTDLYAGAGVIGLSLAAARKC-RSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEP------------L 365 (457)
Q Consensus 299 ~~~vLDl~cG~G~~sl~lA~~~~~-~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~------------~ 365 (457)
.-+++|||||.|++++-+.. +|. .-|.++|+++.|++..+.|.. +..++.+|+.+.. .
T Consensus 851 ~l~viDLFsG~GGlslGfe~-AG~~~vv~avEid~~A~~ty~~N~p--------~~~~~~~DI~~l~~~~~~gdi~~~~~ 921 (1330)
T 3av4_A 851 KLRTLDVFSGCGGLSEGFHQ-AGISETLWAIEMWDPAAQAFRLNNP--------GTTVFTEDCNVLLKLVMAGEVTNSLG 921 (1330)
T ss_dssp CEEEEEETCTTSHHHHHHHH-TTSEEEEEEECCSHHHHHHHHHHCT--------TSEEECSCHHHHHHHHTTTCSBCSSC
T ss_pred CceEEecccCccHHHHHHHH-CCCCceEEEEECCHHHHHHHHHhCC--------CCcEeeccHHHHhHhhhccchhhhhh
Confidence 34799999999999998876 565 568999999999998888742 2245555543211 0
Q ss_pred c-c--cCCccEEEECCCC
Q 044572 366 S-W--LVGSDVLVVDPPR 380 (457)
Q Consensus 366 ~-~--~~~~D~vi~DPPR 380 (457)
. + ...+|+|+.-||-
T Consensus 922 ~~lp~~~~vDvl~GGpPC 939 (1330)
T 3av4_A 922 QRLPQKGDVEMLCGGPPC 939 (1330)
T ss_dssp CBCCCTTTCSEEEECCCC
T ss_pred hhccccCccceEEecCCC
Confidence 1 1 1358999999993
No 312
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=93.87 E-value=0.073 Score=50.30 Aligned_cols=87 Identities=18% Similarity=0.157 Sum_probs=51.8
Q ss_pred HHHHHHHHh-hCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCC-Cc---EEEEEc-c
Q 044572 286 DILLRKLQK-YVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVD-GN---ISWHNA-D 359 (457)
Q Consensus 286 ~~l~~~i~~-~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~-~n---v~~~~~-d 359 (457)
-+|.+...+ ++.+|.+||||||+-|..+..++...+...|.|..+..+. . ....... .+ +.|+++ |
T Consensus 60 yKL~EIdeK~likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~----~----~~P~~~~~~Gv~~i~~~~G~D 131 (269)
T 2px2_A 60 AKLRWLVERRFVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG----H----EEPMLMQSYGWNIVTMKSGVD 131 (269)
T ss_dssp HHHHHHHHTTSCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT----S----CCCCCCCSTTGGGEEEECSCC
T ss_pred HHHHHHHHcCCCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc----c----cCCCcccCCCceEEEeeccCC
Confidence 344433332 4568999999999999999999986333344555543331 0 0111111 22 355557 8
Q ss_pred CCcCcccccCCccEEEECC-CCCCc
Q 044572 360 NSIEPLSWLVGSDVLVVDP-PRKGL 383 (457)
Q Consensus 360 ~~~~~~~~~~~~D~vi~DP-PR~Gl 383 (457)
+.+.. ...+|+|+.|- |..|.
T Consensus 132 f~~~~---~~~~DvVLSDMAPnSG~ 153 (269)
T 2px2_A 132 VFYKP---SEISDTLLCDIGESSPS 153 (269)
T ss_dssp GGGSC---CCCCSEEEECCCCCCSC
T ss_pred ccCCC---CCCCCEEEeCCCCCCCc
Confidence 87632 23699999997 45553
No 313
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=93.39 E-value=0.075 Score=51.22 Aligned_cols=39 Identities=31% Similarity=0.313 Sum_probs=33.5
Q ss_pred hCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHH
Q 044572 295 YVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKE 333 (457)
Q Consensus 295 ~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~ 333 (457)
.+.++.+||||||+.|.++..++...++.+|+|+|+...
T Consensus 78 l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~ 116 (300)
T 3eld_A 78 YLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIE 116 (300)
T ss_dssp SCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCT
T ss_pred CCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEeccc
Confidence 445789999999999999999997667778999999754
No 314
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=87.92 E-value=4.1 Score=39.53 Aligned_cols=100 Identities=12% Similarity=0.120 Sum_probs=66.8
Q ss_pred CCCeEEEEcccccHHHHHHHhh---C-CCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcC--cccccCCc
Q 044572 298 YGASVTDLYAGAGVIGLSLAAA---R-KCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIE--PLSWLVGS 371 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~---~-~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~--~~~~~~~~ 371 (457)
.+++|| +-.|+|.+|..+++. . |..+|++++.++.......+.+. ..+++++.+|+.+. +......+
T Consensus 20 ~~k~vl-VTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~------~~~v~~~~~Dl~d~~~l~~~~~~~ 92 (344)
T 2gn4_A 20 DNQTIL-ITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN------DPRMRFFIGDVRDLERLNYALEGV 92 (344)
T ss_dssp TTCEEE-EETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC------CTTEEEEECCTTCHHHHHHHTTTC
T ss_pred CCCEEE-EECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc------CCCEEEEECCCCCHHHHHHHHhcC
Confidence 367777 667889999888753 2 44589999999887665554332 14689999999763 22234578
Q ss_pred cEEEECCCCCCcc-----------------HHHHHHHHhcCCCCcEEEEec
Q 044572 372 DVLVVDPPRKGLD-----------------SSLVHALQSIGSAERKAKSLS 405 (457)
Q Consensus 372 D~vi~DPPR~Gl~-----------------~~v~~~l~~~~~~~~ivyvs~ 405 (457)
|+||..-...... ..++++..... .+++||+|+
T Consensus 93 D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~-v~~~V~~SS 142 (344)
T 2gn4_A 93 DICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNA-ISQVIALST 142 (344)
T ss_dssp SEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEECC
T ss_pred CEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCC-CCEEEEecC
Confidence 9998866433211 13455555554 789999985
No 315
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=87.40 E-value=0.42 Score=46.63 Aligned_cols=95 Identities=17% Similarity=0.072 Sum_probs=59.0
Q ss_pred CCCCeEEEEccc-ccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCc---ccccCCcc
Q 044572 297 PYGASVTDLYAG-AGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEP---LSWLVGSD 372 (457)
Q Consensus 297 ~~~~~vLDl~cG-~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~---~~~~~~~D 372 (457)
.+|++||-.|+| +|.+++.+|+..|+ +|+++|.+++-.+.+++ ++ .+ ..+..+-.+.. .+..+.+|
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~----lG---a~--~~i~~~~~~~~~~~~~~~g~~d 234 (340)
T 3s2e_A 165 RPGQWVVISGIGGLGHVAVQYARAMGL-RVAAVDIDDAKLNLARR----LG---AE--VAVNARDTDPAAWLQKEIGGAH 234 (340)
T ss_dssp CTTSEEEEECCSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHH----TT---CS--EEEETTTSCHHHHHHHHHSSEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHH----cC---CC--EEEeCCCcCHHHHHHHhCCCCC
Confidence 478999988885 48888889988776 89999999998887754 22 12 22322222211 11124688
Q ss_pred EEEECCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 373 VLVVDPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 373 ~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
+||..- |....+...+..+++.++++.+.
T Consensus 235 ~vid~~---g~~~~~~~~~~~l~~~G~iv~~G 263 (340)
T 3s2e_A 235 GVLVTA---VSPKAFSQAIGMVRRGGTIALNG 263 (340)
T ss_dssp EEEESS---CCHHHHHHHHHHEEEEEEEEECS
T ss_pred EEEEeC---CCHHHHHHHHHHhccCCEEEEeC
Confidence 887653 22333445555566556666653
No 316
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=87.11 E-value=6.5 Score=35.47 Aligned_cols=95 Identities=13% Similarity=0.055 Sum_probs=63.2
Q ss_pred CCCeEEEEcccccHHHHHHHhh---CCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcE-EEEEccCCcCcccccCCccE
Q 044572 298 YGASVTDLYAGAGVIGLSLAAA---RKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNI-SWHNADNSIEPLSWLVGSDV 373 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~---~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv-~~~~~d~~~~~~~~~~~~D~ 373 (457)
.+++|| +-.|+|.+|..+++. .| .+|++++.+++.++... . .++ +++.+|+.+.+.+.....|+
T Consensus 20 ~~~~il-VtGatG~iG~~l~~~L~~~G-~~V~~~~R~~~~~~~~~----~------~~~~~~~~~Dl~~~~~~~~~~~D~ 87 (236)
T 3e8x_A 20 QGMRVL-VVGANGKVARYLLSELKNKG-HEPVAMVRNEEQGPELR----E------RGASDIVVANLEEDFSHAFASIDA 87 (236)
T ss_dssp -CCEEE-EETTTSHHHHHHHHHHHHTT-CEEEEEESSGGGHHHHH----H------TTCSEEEECCTTSCCGGGGTTCSE
T ss_pred CCCeEE-EECCCChHHHHHHHHHHhCC-CeEEEEECChHHHHHHH----h------CCCceEEEcccHHHHHHHHcCCCE
Confidence 467777 566788888877753 23 48999999987654332 1 246 88999987444444567899
Q ss_pred EEECCCCCCc-------------cHHHHHHHHhcCCCCcEEEEec
Q 044572 374 LVVDPPRKGL-------------DSSLVHALQSIGSAERKAKSLS 405 (457)
Q Consensus 374 vi~DPPR~Gl-------------~~~v~~~l~~~~~~~~ivyvs~ 405 (457)
||..-....- ...+++++.+.. .+++||+|+
T Consensus 88 vi~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS 131 (236)
T 3e8x_A 88 VVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRG-IKRFIMVSS 131 (236)
T ss_dssp EEECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHT-CCEEEEECC
T ss_pred EEECCCCCCCCCccccchhhHHHHHHHHHHHHHcC-CCEEEEEec
Confidence 9987653211 123566666664 789999985
No 317
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=86.02 E-value=2.1 Score=41.52 Aligned_cols=104 Identities=13% Similarity=0.017 Sum_probs=58.6
Q ss_pred CeEEEEcccccHHHHHHHh---h-CCCC--EEEEEeCCH--------HHHH-HHHHHHhhCCC--CCCCcEEEEEccCCc
Q 044572 300 ASVTDLYAGAGVIGLSLAA---A-RKCR--SVKCVEINK--------ESQL-SFEKTVSRLPK--SVDGNISWHNADNSI 362 (457)
Q Consensus 300 ~~vLDl~cG~G~~sl~lA~---~-~~~~--~V~gVE~~~--------~av~-~A~~Na~~~~~--~~~~nv~~~~~d~~~ 362 (457)
-+|||+|=|+|.-.+.... . .... +.+.+|..+ +... ..+.-...... +..-..++..||+.+
T Consensus 98 ~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa~~ 177 (308)
T 3vyw_A 98 IRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDARK 177 (308)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCHHH
T ss_pred cEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechHHH
Confidence 4699999999985443321 1 1112 457777532 1111 11111111100 111235678899988
Q ss_pred Cccccc-CCccEEEECC--CCCCc---cHHHHHHHHhcCCCCcEEEE
Q 044572 363 EPLSWL-VGSDVLVVDP--PRKGL---DSSLVHALQSIGSAERKAKS 403 (457)
Q Consensus 363 ~~~~~~-~~~D~vi~DP--PR~Gl---~~~v~~~l~~~~~~~~ivyv 403 (457)
.+.++. ..+|+|++|+ |+..- +.++.+.+..+..+++.+..
T Consensus 178 ~l~~l~~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~pgg~laT 224 (308)
T 3vyw_A 178 RIKEVENFKADAVFHDAFSPYKNPELWTLDFLSLIKERIDEKGYWVS 224 (308)
T ss_dssp HGGGCCSCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEEEEEEEEE
T ss_pred HHhhhcccceeEEEeCCCCcccCcccCCHHHHHHHHHHhCCCcEEEE
Confidence 776654 3699999998 65532 35788888877655555544
No 318
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=85.69 E-value=8.8 Score=35.94 Aligned_cols=78 Identities=14% Similarity=0.082 Sum_probs=52.9
Q ss_pred CCCeEEEEcccccHHHHHHHhh---CCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcC-c--ccc----
Q 044572 298 YGASVTDLYAGAGVIGLSLAAA---RKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIE-P--LSW---- 367 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~---~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~-~--~~~---- 367 (457)
.++++| +-.|+|.+|..+|+. .| .+|++++.+.+..+.+.+.++.. ...++.++..|+.+. . ..+
T Consensus 11 ~~k~vl-ITGas~GIG~~~a~~L~~~G-~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~Dl~~~~~~v~~~~~~~ 85 (311)
T 3o26_A 11 KRRCAV-VTGGNKGIGFEICKQLSSNG-IMVVLTCRDVTKGHEAVEKLKNS---NHENVVFHQLDVTDPIATMSSLADFI 85 (311)
T ss_dssp -CCEEE-ESSCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHTT---TCCSEEEEECCTTSCHHHHHHHHHHH
T ss_pred CCcEEE-EecCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhc---CCCceEEEEccCCCcHHHHHHHHHHH
Confidence 356666 555667777776653 33 48999999999887777766542 235799999999875 1 111
Q ss_pred ---cCCccEEEECCCC
Q 044572 368 ---LVGSDVLVVDPPR 380 (457)
Q Consensus 368 ---~~~~D~vi~DPPR 380 (457)
.+..|++|.+--.
T Consensus 86 ~~~~g~iD~lv~nAg~ 101 (311)
T 3o26_A 86 KTHFGKLDILVNNAGV 101 (311)
T ss_dssp HHHHSSCCEEEECCCC
T ss_pred HHhCCCCCEEEECCcc
Confidence 2478999987653
No 319
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=85.38 E-value=0.9 Score=45.41 Aligned_cols=44 Identities=23% Similarity=0.060 Sum_probs=36.7
Q ss_pred CCCCCeEEEEcccc-cHHHHHHHhhCCCCEEEEEeCCHHHHHHHH
Q 044572 296 VPYGASVTDLYAGA-GVIGLSLAAARKCRSVKCVEINKESQLSFE 339 (457)
Q Consensus 296 ~~~~~~vLDl~cG~-G~~sl~lA~~~~~~~V~gVE~~~~av~~A~ 339 (457)
+.+|++||-.|+|. |.+++.+|+..|+++|+++|.+++.++.++
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~ 227 (398)
T 2dph_A 183 VKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLS 227 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH
Confidence 34789999999865 888888888777779999999999887765
No 320
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=84.11 E-value=1.4 Score=47.53 Aligned_cols=104 Identities=11% Similarity=-0.017 Sum_probs=64.4
Q ss_pred CCeEEEEcccccHHHHHHHhhC----------CC--CEEEEEeCCHHHHHHHHHHHh--------------hCCC-----
Q 044572 299 GASVTDLYAGAGVIGLSLAAAR----------KC--RSVKCVEINKESQLSFEKTVS--------------RLPK----- 347 (457)
Q Consensus 299 ~~~vLDl~cG~G~~sl~lA~~~----------~~--~~V~gVE~~~~av~~A~~Na~--------------~~~~----- 347 (457)
.-+|+|+|-|+|...+.+.+.. .. -+++.+|..|-..+++++-.+ ....
T Consensus 59 ~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 138 (689)
T 3pvc_A 59 SCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAGC 138 (689)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSEE
T ss_pred ceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCCc
Confidence 3589999999999777765531 11 369999996544444443211 0000
Q ss_pred ------CCCCcEEEEEccCCcCcccc----cCCccEEEECCCCCCc-----cHHHHHHHHhcCCCCcEEE
Q 044572 348 ------SVDGNISWHNADNSIEPLSW----LVGSDVLVVDPPRKGL-----DSSLVHALQSIGSAERKAK 402 (457)
Q Consensus 348 ------~~~~nv~~~~~d~~~~~~~~----~~~~D~vi~DPPR~Gl-----~~~v~~~l~~~~~~~~ivy 402 (457)
++.-.++++.||+.+.+.++ ...+|++++|+-.... +.+++..|..+..++..+.
T Consensus 139 ~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~ 208 (689)
T 3pvc_A 139 HRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFS 208 (689)
T ss_dssp EEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEE
T ss_pred eEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEE
Confidence 01125678889998777655 2579999999964322 3567777777653444443
No 321
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=83.93 E-value=8.3 Score=38.46 Aligned_cols=73 Identities=14% Similarity=-0.085 Sum_probs=42.9
Q ss_pred CCeEEEEcccccHHHHHHHhh-----------------CCCCEEEEEeCC-----------HHHHHHHHHHHhhCCCCCC
Q 044572 299 GASVTDLYAGAGVIGLSLAAA-----------------RKCRSVKCVEIN-----------KESQLSFEKTVSRLPKSVD 350 (457)
Q Consensus 299 ~~~vLDl~cG~G~~sl~lA~~-----------------~~~~~V~gVE~~-----------~~av~~A~~Na~~~~~~~~ 350 (457)
.-+|+|+||++|..++.+... ...-+|+..|.- +...+.+++. . +..
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~---~--g~~ 127 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKE---N--GRK 127 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHH---T--CCC
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhh---c--cCC
Confidence 467999999999999988764 112367788876 4444443221 1 111
Q ss_pred CcEEEEEccCCcCcccc--cCCccEEEE
Q 044572 351 GNISWHNADNSIEPLSW--LVGSDVLVV 376 (457)
Q Consensus 351 ~nv~~~~~d~~~~~~~~--~~~~D~vi~ 376 (457)
.+-.|+.|....+-.++ .+.+|+|+.
T Consensus 128 ~~~~f~~gvpgSFy~rlfp~~S~d~v~S 155 (384)
T 2efj_A 128 IGSCLIGAMPGSFYSRLFPEESMHFLHS 155 (384)
T ss_dssp TTSEEEEECCSCTTSCCSCTTCEEEEEE
T ss_pred CCceEEEecchhhhhccCCCCceEEEEe
Confidence 23367777665543322 245777754
No 322
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=83.66 E-value=6.5 Score=38.96 Aligned_cols=111 Identities=14% Similarity=0.172 Sum_probs=67.9
Q ss_pred HHHHHHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCc
Q 044572 283 RAFDILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSI 362 (457)
Q Consensus 283 ~~~~~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~ 362 (457)
..-|.|++.+.+. ..+.+||.+..+.|.+++.++.. .++.+.-|--+...++.|++.|+.. .+++++.... +
T Consensus 24 a~d~~ll~~~~~~-~~~~~~~~~~d~~gal~~~~~~~----~~~~~~ds~~~~~~~~~n~~~~~~~-~~~~~~~~~~--~ 95 (375)
T 4dcm_A 24 AADEYLLQQLDDT-EIRGPVLILNDAFGALSCALAEH----KPYSIGDSYISELATRENLRLNGID-ESSVKFLDST--A 95 (375)
T ss_dssp HHHHHHHHTTTTC-CCCSCEEEECCSSSHHHHHTGGG----CCEEEESCHHHHHHHHHHHHHTTCC-GGGSEEEETT--S
T ss_pred hHHHHHHHhhhhc-cCCCCEEEECCCCCHHHHhhccC----CceEEEhHHHHHHHHHHHHHHcCCC-ccceEecccc--c
Confidence 3445566654443 24568999999999999998743 4677766777888889999984321 1235654321 1
Q ss_pred CcccccCCccEEEECCCCCC-ccHHHHHHHHhcCCCCcEEEEe
Q 044572 363 EPLSWLVGSDVLVVDPPRKG-LDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 363 ~~~~~~~~~D~vi~DPPR~G-l~~~v~~~l~~~~~~~~ivyvs 404 (457)
.....+|+|++--|+.- .-...+..+...-.++..+++.
T Consensus 96 ---~~~~~~~~v~~~lpk~~~~l~~~L~~l~~~l~~~~~i~~~ 135 (375)
T 4dcm_A 96 ---DYPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAG 135 (375)
T ss_dssp ---CCCSSCSEEEEECCSCHHHHHHHHHHHHTTCCTTSEEEEE
T ss_pred ---ccccCCCEEEEEcCCCHHHHHHHHHHHHhhCCCCCEEEEE
Confidence 12357999999988741 1122344444433344444443
No 323
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=83.40 E-value=1.5 Score=43.27 Aligned_cols=97 Identities=16% Similarity=0.074 Sum_probs=59.0
Q ss_pred CCCCCeEEEEcccc-cHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcC---ccccc-CC
Q 044572 296 VPYGASVTDLYAGA-GVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIE---PLSWL-VG 370 (457)
Q Consensus 296 ~~~~~~vLDl~cG~-G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~---~~~~~-~~ 370 (457)
+.+|++||-.|+|. |.+++.+|+..|+++|+++|.+++-++.+++. + .+ ..+..+..++ +.+.. +.
T Consensus 188 ~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~l----G---a~--~vi~~~~~~~~~~~~~~~~gg 258 (371)
T 1f8f_A 188 VTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQL----G---AT--HVINSKTQDPVAAIKEITDGG 258 (371)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHH----T---CS--EEEETTTSCHHHHHHHHTTSC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc----C---CC--EEecCCccCHHHHHHHhcCCC
Confidence 34789999998865 77788888777777899999999988887642 1 12 2232221121 11111 25
Q ss_pred ccEEEECCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 371 SDVLVVDPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 371 ~D~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
+|+||-- .|....+...+..+++.++++.+.
T Consensus 259 ~D~vid~---~g~~~~~~~~~~~l~~~G~iv~~G 289 (371)
T 1f8f_A 259 VNFALES---TGSPEILKQGVDALGILGKIAVVG 289 (371)
T ss_dssp EEEEEEC---SCCHHHHHHHHHTEEEEEEEEECC
T ss_pred CcEEEEC---CCCHHHHHHHHHHHhcCCEEEEeC
Confidence 8887742 232233445556666556666664
No 324
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=83.35 E-value=1.7 Score=43.17 Aligned_cols=45 Identities=20% Similarity=0.111 Sum_probs=36.8
Q ss_pred CCCCCeEEEEcccc-cHHHHHHHhhCCCCEEEEEeCCHHHHHHHHH
Q 044572 296 VPYGASVTDLYAGA-GVIGLSLAAARKCRSVKCVEINKESQLSFEK 340 (457)
Q Consensus 296 ~~~~~~vLDl~cG~-G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~ 340 (457)
+.+|++||-.|+|. |.+++.+|+..|+++|+++|.+++-++.+++
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~ 228 (398)
T 1kol_A 183 VGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA 228 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHH
Confidence 34789999888754 7788888888888799999999998888753
No 325
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=83.33 E-value=0.62 Score=45.45 Aligned_cols=54 Identities=13% Similarity=-0.068 Sum_probs=36.2
Q ss_pred CcEEEEEccCCcCcccc-cCCccEEEECCCCCCc----------------cHHHHHHHHhcCCCCcEEEEe
Q 044572 351 GNISWHNADNSIEPLSW-LVGSDVLVVDPPRKGL----------------DSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 351 ~nv~~~~~d~~~~~~~~-~~~~D~vi~DPPR~Gl----------------~~~v~~~l~~~~~~~~ivyvs 404 (457)
++..+++||+.+.+..+ .+.+|+|++|||+... -..+++.+.++..+++.+|+.
T Consensus 13 ~~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~ 83 (323)
T 1boo_A 13 SNGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVD 83 (323)
T ss_dssp SSEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEE
Confidence 46789999987755433 2579999999998532 123444444443478888886
No 326
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=83.15 E-value=0.34 Score=45.66 Aligned_cols=52 Identities=10% Similarity=-0.053 Sum_probs=34.3
Q ss_pred EEEEEccCCcCccccc-CCccEEEECCCCCCc----------------cHHHHHHHHhcCCCCcEEEEe
Q 044572 353 ISWHNADNSIEPLSWL-VGSDVLVVDPPRKGL----------------DSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 353 v~~~~~d~~~~~~~~~-~~~D~vi~DPPR~Gl----------------~~~v~~~l~~~~~~~~ivyvs 404 (457)
.+++++|+.+.+..+. +++|+|++|||+..- ...+++.+.++..+++.+|++
T Consensus 5 ~~l~~gD~~~~l~~l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~ 73 (260)
T 1g60_A 5 NKIHQMNCFDFLDQVENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIF 73 (260)
T ss_dssp SSEEECCHHHHHHHSCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CeEEechHHHHHHhccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 3678999877654433 479999999998522 123444444443478888887
No 327
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=82.56 E-value=16 Score=34.43 Aligned_cols=104 Identities=12% Similarity=0.040 Sum_probs=61.8
Q ss_pred CCCeEEEEcccccHHHHHHHhh---CCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEE-EccCCcC--cccccCCc
Q 044572 298 YGASVTDLYAGAGVIGLSLAAA---RKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWH-NADNSIE--PLSWLVGS 371 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~---~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~-~~d~~~~--~~~~~~~~ 371 (457)
.+++|| +-.|+|.+|..+++. .| .+|++++.++...+......+.. ...+++++ .+|+.+. +......+
T Consensus 10 ~~~~vl-VTGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~D~~d~~~~~~~~~~~ 84 (342)
T 1y1p_A 10 EGSLVL-VTGANGFVASHVVEQLLEHG-YKVRGTARSASKLANLQKRWDAK---YPGRFETAVVEDMLKQGAYDEVIKGA 84 (342)
T ss_dssp TTCEEE-EETTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHHHHH---STTTEEEEECSCTTSTTTTTTTTTTC
T ss_pred CCCEEE-EECCccHHHHHHHHHHHHCC-CEEEEEeCCcccHHHHHHHhhcc---CCCceEEEEecCCcChHHHHHHHcCC
Confidence 466777 566789998887653 23 48999999987655443332211 01467888 7898753 22223468
Q ss_pred cEEEECCCCCCc--cH------------HHHHHHHhcCCCCcEEEEecc
Q 044572 372 DVLVVDPPRKGL--DS------------SLVHALQSIGSAERKAKSLSE 406 (457)
Q Consensus 372 D~vi~DPPR~Gl--~~------------~v~~~l~~~~~~~~ivyvs~~ 406 (457)
|+||..-..... +. .+++++......+++||+||.
T Consensus 85 d~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~ 133 (342)
T 1y1p_A 85 AGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSST 133 (342)
T ss_dssp SEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCG
T ss_pred CEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccH
Confidence 998875432211 11 234444432236899999864
No 328
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=82.53 E-value=3.4 Score=40.28 Aligned_cols=96 Identities=15% Similarity=0.057 Sum_probs=57.9
Q ss_pred CCCCCeEEEEccc-ccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccC-CcCc---ccc---
Q 044572 296 VPYGASVTDLYAG-AGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADN-SIEP---LSW--- 367 (457)
Q Consensus 296 ~~~~~~vLDl~cG-~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~-~~~~---~~~--- 367 (457)
+.+|++||-.|+| .|.+++.+|+..|++ |+++|.+++-++.+++ ++ .+ ..+..+- .+.. .+.
T Consensus 166 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~-Vi~~~~~~~~~~~~~~----lG---a~--~~~~~~~~~~~~~~i~~~~~~ 235 (352)
T 1e3j_A 166 VQLGTTVLVIGAGPIGLVSVLAAKAYGAF-VVCTARSPRRLEVAKN----CG---AD--VTLVVDPAKEEESSIIERIRS 235 (352)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHH----TT---CS--EEEECCTTTSCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCE-EEEEcCCHHHHHHHHH----hC---CC--EEEcCcccccHHHHHHHHhcc
Confidence 3478999988875 367777777777764 9999999998887763 22 12 2222221 1211 111
Q ss_pred --cCCccEEEECCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 368 --LVGSDVLVVDPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 368 --~~~~D~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
...+|+||-.- |....+...+..+++.++++.+.
T Consensus 236 ~~g~g~D~vid~~---g~~~~~~~~~~~l~~~G~iv~~G 271 (352)
T 1e3j_A 236 AIGDLPNVTIDCS---GNEKCITIGINITRTGGTLMLVG 271 (352)
T ss_dssp HSSSCCSEEEECS---CCHHHHHHHHHHSCTTCEEEECS
T ss_pred ccCCCCCEEEECC---CCHHHHHHHHHHHhcCCEEEEEe
Confidence 13689887533 22223455566677677777764
No 329
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=81.64 E-value=2.3 Score=41.63 Aligned_cols=97 Identities=14% Similarity=0.060 Sum_probs=60.2
Q ss_pred CCCCCeEEEEcccc-cHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEcc---CCcC---cccc-
Q 044572 296 VPYGASVTDLYAGA-GVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNAD---NSIE---PLSW- 367 (457)
Q Consensus 296 ~~~~~~vLDl~cG~-G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d---~~~~---~~~~- 367 (457)
+.+|++||-.|+|. |.+++.+|+..|+++|+++|.+++-++.+++ ++ .+ ..+..+ ..+. +...
T Consensus 169 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lG---a~--~vi~~~~~~~~~~~~~i~~~~ 239 (356)
T 1pl8_A 169 VTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKE----IG---AD--LVLQISKESPQEIARKVEGQL 239 (356)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TT---CS--EEEECSSCCHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----hC---CC--EEEcCcccccchHHHHHHHHh
Confidence 34789999988764 7777888887777799999999998887763 22 12 223222 1111 1111
Q ss_pred cCCccEEEECCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 368 LVGSDVLVVDPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 368 ~~~~D~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
...+|+||--- |....+...+..+++.++++.+.
T Consensus 240 ~~g~D~vid~~---g~~~~~~~~~~~l~~~G~iv~~G 273 (356)
T 1pl8_A 240 GCKPEVTIECT---GAEASIQAGIYATRSGGTLVLVG 273 (356)
T ss_dssp TSCCSEEEECS---CCHHHHHHHHHHSCTTCEEEECS
T ss_pred CCCCCEEEECC---CChHHHHHHHHHhcCCCEEEEEe
Confidence 14689887532 32233455666677677777764
No 330
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=81.19 E-value=3.9 Score=34.12 Aligned_cols=91 Identities=12% Similarity=0.068 Sum_probs=53.7
Q ss_pred CeEEEEcccccHHHHHHHhhC--CCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcC--cccc-cCCccEE
Q 044572 300 ASVTDLYAGAGVIGLSLAAAR--KCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIE--PLSW-LVGSDVL 374 (457)
Q Consensus 300 ~~vLDl~cG~G~~sl~lA~~~--~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~--~~~~-~~~~D~v 374 (457)
.+|+ -||.|.+|..+|+.. ....|+++|.+++.++.+++ . .+.++.+|+.+. +... ...+|+|
T Consensus 8 ~~vi--IiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~---~-------g~~~i~gd~~~~~~l~~a~i~~ad~v 75 (140)
T 3fwz_A 8 NHAL--LVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRE---R-------GVRAVLGNAANEEIMQLAHLECAKWL 75 (140)
T ss_dssp SCEE--EECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH---T-------TCEEEESCTTSHHHHHHTTGGGCSEE
T ss_pred CCEE--EECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH---c-------CCCEEECCCCCHHHHHhcCcccCCEE
Confidence 3455 345677777777531 12489999999999877653 1 246788998753 1111 2468988
Q ss_pred EECCCCCCccHHHHHHHHhcCCCCcEEE
Q 044572 375 VVDPPRKGLDSSLVHALQSIGSAERKAK 402 (457)
Q Consensus 375 i~DPPR~Gl~~~v~~~l~~~~~~~~ivy 402 (457)
|+--|.......+...++.+.+..+++.
T Consensus 76 i~~~~~~~~n~~~~~~a~~~~~~~~iia 103 (140)
T 3fwz_A 76 ILTIPNGYEAGEIVASARAKNPDIEIIA 103 (140)
T ss_dssp EECCSCHHHHHHHHHHHHHHCSSSEEEE
T ss_pred EEECCChHHHHHHHHHHHHHCCCCeEEE
Confidence 8765543222234555666653334443
No 331
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=80.90 E-value=5.9 Score=32.72 Aligned_cols=91 Identities=18% Similarity=0.165 Sum_probs=55.6
Q ss_pred CeEEEEcccccHHHHHHHhh---CCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcC--cccc-cCCccE
Q 044572 300 ASVTDLYAGAGVIGLSLAAA---RKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIE--PLSW-LVGSDV 373 (457)
Q Consensus 300 ~~vLDl~cG~G~~sl~lA~~---~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~--~~~~-~~~~D~ 373 (457)
.+|+=+|+ |.+|..+++. .| .+|+++|.+++.++.++. . .+.++.+|+.+. +... ...+|+
T Consensus 7 ~~v~I~G~--G~iG~~la~~L~~~g-~~V~~id~~~~~~~~~~~---~-------~~~~~~gd~~~~~~l~~~~~~~~d~ 73 (141)
T 3llv_A 7 YEYIVIGS--EAAGVGLVRELTAAG-KKVLAVDKSKEKIELLED---E-------GFDAVIADPTDESFYRSLDLEGVSA 73 (141)
T ss_dssp CSEEEECC--SHHHHHHHHHHHHTT-CCEEEEESCHHHHHHHHH---T-------TCEEEECCTTCHHHHHHSCCTTCSE
T ss_pred CEEEEECC--CHHHHHHHHHHHHCC-CeEEEEECCHHHHHHHHH---C-------CCcEEECCCCCHHHHHhCCcccCCE
Confidence 45665555 6677777653 23 489999999998876653 1 246788998753 1111 246899
Q ss_pred EEECCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 374 LVVDPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 374 vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
||+-.|.......+...++.+. ..+++...
T Consensus 74 vi~~~~~~~~n~~~~~~a~~~~-~~~iia~~ 103 (141)
T 3llv_A 74 VLITGSDDEFNLKILKALRSVS-DVYAIVRV 103 (141)
T ss_dssp EEECCSCHHHHHHHHHHHHHHC-CCCEEEEE
T ss_pred EEEecCCHHHHHHHHHHHHHhC-CceEEEEE
Confidence 9887773222223455555665 45555543
No 332
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=79.26 E-value=0.98 Score=43.32 Aligned_cols=31 Identities=23% Similarity=0.244 Sum_probs=23.9
Q ss_pred CcEEEEEccCCcCccccc-CCccEEEECCCCC
Q 044572 351 GNISWHNADNSIEPLSWL-VGSDVLVVDPPRK 381 (457)
Q Consensus 351 ~nv~~~~~d~~~~~~~~~-~~~D~vi~DPPR~ 381 (457)
.+++++++|+.+.+..+. +.+|+||.|||+.
T Consensus 20 ~~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~ 51 (297)
T 2zig_A 20 GVHRLHVGDAREVLASFPEASVHLVVTSPPYW 51 (297)
T ss_dssp -CEEEEESCHHHHHTTSCTTCEEEEEECCCCC
T ss_pred cCCEEEECcHHHHHhhCCCCceeEEEECCCCC
Confidence 467899999987554332 5799999999985
No 333
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=78.53 E-value=0.85 Score=44.47 Aligned_cols=53 Identities=9% Similarity=0.025 Sum_probs=35.0
Q ss_pred cEEEE-EccCCcCccccc-CCccEEEECCCCCCc-------------cHHHHHHHHhcCCCCcEEEEe
Q 044572 352 NISWH-NADNSIEPLSWL-VGSDVLVVDPPRKGL-------------DSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 352 nv~~~-~~d~~~~~~~~~-~~~D~vi~DPPR~Gl-------------~~~v~~~l~~~~~~~~ivyvs 404 (457)
...++ ++|+.+.+..+. +.+|+|++|||+... -...+..+.++..+++++|+.
T Consensus 38 ~~~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~ 105 (319)
T 1eg2_A 38 TRHVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIF 105 (319)
T ss_dssp EEEEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cceEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 45777 999987654433 479999999998532 112333333433478888987
No 334
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=78.31 E-value=20 Score=35.48 Aligned_cols=105 Identities=14% Similarity=0.146 Sum_probs=67.3
Q ss_pred CCeEEEEcccccHHHHHHHhh---CCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcc--cc--cCCc
Q 044572 299 GASVTDLYAGAGVIGLSLAAA---RKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPL--SW--LVGS 371 (457)
Q Consensus 299 ~~~vLDl~cG~G~~sl~lA~~---~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~--~~--~~~~ 371 (457)
+++|| +-.|+|.+|..+++. .|..+|++++.++..+....+.+.........+++++.+|+.+... .. ..++
T Consensus 35 ~k~vL-VTGatG~IG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~ 113 (399)
T 3nzo_A 35 QSRFL-VLGGAGSIGQAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTFALDIGSIEYDAFIKADGQY 113 (399)
T ss_dssp TCEEE-EETTTSHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHHTCCCSSEEEEECCCTTSHHHHHHHHHCCCC
T ss_pred CCEEE-EEcCChHHHHHHHHHHHHCCCCEEEEEECCcchHHHHHHHHHHhcCCCCCcEEEEEEeCCCHHHHHHHHHhCCC
Confidence 67777 556789998888763 2336899999999887766665543211112578999999876321 11 2478
Q ss_pred cEEEECCCCCC----ccH---------------HHHHHHHhcCCCCcEEEEec
Q 044572 372 DVLVVDPPRKG----LDS---------------SLVHALQSIGSAERKAKSLS 405 (457)
Q Consensus 372 D~vi~DPPR~G----l~~---------------~v~~~l~~~~~~~~ivyvs~ 405 (457)
|+||..-.... .++ .+++++.... .+++||+|+
T Consensus 114 D~Vih~Aa~~~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~g-v~r~V~iSS 165 (399)
T 3nzo_A 114 DYVLNLSALKHVRSEKDPFTLMRMIDVNVFNTDKTIQQSIDAG-AKKYFCVST 165 (399)
T ss_dssp SEEEECCCCCCGGGGSSHHHHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEECC
T ss_pred CEEEECCCcCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEeC
Confidence 99886433211 122 3566666664 679999974
No 335
>2g1p_A DNA adenine methylase; DAM methylation, GATC recognition, base flipping, bacterial factor, transferase-DNA complex; HET: DNA SAH; 1.89A {Escherichia coli} PDB: 2ore_D*
Probab=77.43 E-value=2.3 Score=40.53 Aligned_cols=45 Identities=22% Similarity=0.380 Sum_probs=36.4
Q ss_pred HHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHH
Q 044572 287 ILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQ 335 (457)
Q Consensus 287 ~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av 335 (457)
.|+..|.+++++..+.+|.|+|+|+.++.+. ..+++.-|++++.+
T Consensus 16 ~l~~~i~~~~p~~~~yvEpF~Ggg~V~~~~~----~~~~i~ND~n~~li 60 (278)
T 2g1p_A 16 PLLDDIKRHLPKGECLVEPFVGAGSVFLNTD----FSRYILADINSDLI 60 (278)
T ss_dssp GGHHHHHHHCCCCSEEEETTCTTCHHHHTCC----CSEEEEEESCHHHH
T ss_pred HHHHHHHHhccccCeEEeeccCccHHHHhhc----ccceEEEeccHHHH
Confidence 3456777777667899999999999987653 35899999999987
No 336
>2dpm_A M.dpnii 1, protein (adenine-specific methyltransferase dpnii 1); DNA adenine methyltransferase, methylase; HET: SAM; 1.80A {Streptococcus pneumoniae} SCOP: c.66.1.28
Probab=77.31 E-value=3 Score=39.85 Aligned_cols=46 Identities=20% Similarity=0.252 Sum_probs=36.3
Q ss_pred HHHHHHHhhCCC-CCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHH
Q 044572 287 ILLRKLQKYVPY-GASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQL 336 (457)
Q Consensus 287 ~l~~~i~~~~~~-~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~ 336 (457)
.|+..+.++++. ..+.+|.|+|+|+.++.+. ..+++.-|++++.+.
T Consensus 23 ~l~~~i~~~lp~~~~~yvEpF~GggaV~~~~~----~~~~i~ND~n~~Lin 69 (284)
T 2dpm_A 23 QLLPVIRELIPKTYNRYFEPFVGGGALFFDLA----PKDAVINDFNAELIN 69 (284)
T ss_dssp GGHHHHHHHSCSSCSCEEETTCTTCHHHHHHC----CSEEEEEESCHHHHH
T ss_pred HHHHHHHHHhccccCEEEeecCCccHHHHhhh----ccceeeeecchHHHH
Confidence 345667777764 5789999999999998764 248999999998865
No 337
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=77.26 E-value=29 Score=31.97 Aligned_cols=78 Identities=17% Similarity=0.083 Sum_probs=50.8
Q ss_pred CCCeEEEEcccccHHHHHHHhh---CCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcc--cc-----
Q 044572 298 YGASVTDLYAGAGVIGLSLAAA---RKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPL--SW----- 367 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~---~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~--~~----- 367 (457)
.++++| +-.|+|.+|..+++. .| .+|++++.+++.++...+.++.. +...++.++.+|+.+... ..
T Consensus 31 ~~k~vl-VTGasggIG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 106 (279)
T 1xg5_A 31 RDRLAL-VTGASGGIGAAVARALVQQG-LKVVGCARTVGNIEELAAECKSA--GYPGTLIPYRCDLSNEEDILSMFSAIR 106 (279)
T ss_dssp TTCEEE-EESTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHT--TCSSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEE-EECCCchHHHHHHHHHHHCC-CEEEEEECChHHHHHHHHHHHhc--CCCceEEEEEecCCCHHHHHHHHHHHH
Confidence 356666 455778888777653 33 48999999998877766655542 122468889999876311 11
Q ss_pred --cCCccEEEECCC
Q 044572 368 --LVGSDVLVVDPP 379 (457)
Q Consensus 368 --~~~~D~vi~DPP 379 (457)
....|+||.+--
T Consensus 107 ~~~g~iD~vi~~Ag 120 (279)
T 1xg5_A 107 SQHSGVDICINNAG 120 (279)
T ss_dssp HHHCCCSEEEECCC
T ss_pred HhCCCCCEEEECCC
Confidence 136899988653
No 338
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=77.07 E-value=30 Score=31.89 Aligned_cols=76 Identities=20% Similarity=0.102 Sum_probs=51.2
Q ss_pred CCCeEEEEcccccHHHHHHHhh---CCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCc--cc------
Q 044572 298 YGASVTDLYAGAGVIGLSLAAA---RKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEP--LS------ 366 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~---~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~--~~------ 366 (457)
.++++| +-.|+|.+|..+++. .| .+|++++.+++.++...+.++.. ..++.++.+|+.+.. ..
T Consensus 30 ~~k~vl-ITGasggIG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dl~~~~~v~~~~~~~~ 103 (272)
T 1yb1_A 30 TGEIVL-ITGAGHGIGRLTAYEFAKLK-SKLVLWDINKHGLEETAAKCKGL----GAKVHTFVVDCSNREDIYSSAKKVK 103 (272)
T ss_dssp TTCEEE-EETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEE-EECCCchHHHHHHHHHHHCC-CEEEEEEcCHHHHHHHHHHHHhc----CCeEEEEEeeCCCHHHHHHHHHHHH
Confidence 356666 455677788777653 33 47999999998887766666542 146899999987631 11
Q ss_pred -ccCCccEEEECCC
Q 044572 367 -WLVGSDVLVVDPP 379 (457)
Q Consensus 367 -~~~~~D~vi~DPP 379 (457)
..+..|+||.+--
T Consensus 104 ~~~g~iD~li~~Ag 117 (272)
T 1yb1_A 104 AEIGDVSILVNNAG 117 (272)
T ss_dssp HHTCCCSEEEECCC
T ss_pred HHCCCCcEEEECCC
Confidence 1246899988753
No 339
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=77.06 E-value=23 Score=31.88 Aligned_cols=75 Identities=21% Similarity=0.232 Sum_probs=50.6
Q ss_pred CCCeEEEEcccccHHHHHHHhh---CCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCc--ccc-----
Q 044572 298 YGASVTDLYAGAGVIGLSLAAA---RKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEP--LSW----- 367 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~---~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~--~~~----- 367 (457)
.++++| +-.|+|.+|..+++. .| .+|++++.+++..+...+.++.. ..++.++.+|+.+.. ...
T Consensus 10 ~~~~vl-VtGasggiG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~ 83 (255)
T 1fmc_A 10 DGKCAI-ITGAGAGIGKEIAITFATAG-ASVVVSDINADAANHVVDEIQQL----GGQAFACRCDITSEQELSALADFAI 83 (255)
T ss_dssp TTCEEE-ETTTTSHHHHHHHHHHHTTT-CEEEEEESCHHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEE-EECCccHHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHHHHHHh----CCceEEEEcCCCCHHHHHHHHHHHH
Confidence 356666 566788888887753 23 48999999998877666665542 146889999987631 111
Q ss_pred --cCCccEEEECC
Q 044572 368 --LVGSDVLVVDP 378 (457)
Q Consensus 368 --~~~~D~vi~DP 378 (457)
....|+||.+-
T Consensus 84 ~~~~~~d~vi~~A 96 (255)
T 1fmc_A 84 SKLGKVDILVNNA 96 (255)
T ss_dssp HHHSSCCEEEECC
T ss_pred HhcCCCCEEEECC
Confidence 13689998764
No 340
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=76.65 E-value=9.9 Score=30.80 Aligned_cols=91 Identities=13% Similarity=0.160 Sum_probs=53.5
Q ss_pred CeEEEEcccccHHHHHHHhh---CCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcC--cccc-cCCccE
Q 044572 300 ASVTDLYAGAGVIGLSLAAA---RKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIE--PLSW-LVGSDV 373 (457)
Q Consensus 300 ~~vLDl~cG~G~~sl~lA~~---~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~--~~~~-~~~~D~ 373 (457)
.+|+=+ |.|.+|..++.. .+ .+|+.+|.+++.++.++++. .+.++.+|..+. +... ...+|+
T Consensus 5 m~i~Ii--G~G~iG~~~a~~L~~~g-~~v~~~d~~~~~~~~~~~~~---------~~~~~~~d~~~~~~l~~~~~~~~d~ 72 (140)
T 1lss_A 5 MYIIIA--GIGRVGYTLAKSLSEKG-HDIVLIDIDKDICKKASAEI---------DALVINGDCTKIKTLEDAGIEDADM 72 (140)
T ss_dssp CEEEEE--CCSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHC---------SSEEEESCTTSHHHHHHTTTTTCSE
T ss_pred CEEEEE--CCCHHHHHHHHHHHhCC-CeEEEEECCHHHHHHHHHhc---------CcEEEEcCCCCHHHHHHcCcccCCE
Confidence 456534 668888777653 23 48999999998776554321 235677776532 1111 346899
Q ss_pred EEECCCCCCccHHHHHHHHhcCCCCcEEEE
Q 044572 374 LVVDPPRKGLDSSLVHALQSIGSAERKAKS 403 (457)
Q Consensus 374 vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyv 403 (457)
||+-.|.......+...+..+. +++++..
T Consensus 73 vi~~~~~~~~~~~~~~~~~~~~-~~~ii~~ 101 (140)
T 1lss_A 73 YIAVTGKEEVNLMSSLLAKSYG-INKTIAR 101 (140)
T ss_dssp EEECCSCHHHHHHHHHHHHHTT-CCCEEEE
T ss_pred EEEeeCCchHHHHHHHHHHHcC-CCEEEEE
Confidence 8887764322223444555554 5666654
No 341
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=76.10 E-value=6.3 Score=34.20 Aligned_cols=91 Identities=18% Similarity=0.118 Sum_probs=52.9
Q ss_pred CCeEEEEcccccHHHHHHHhh---C-CCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcC--cccc--cCC
Q 044572 299 GASVTDLYAGAGVIGLSLAAA---R-KCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIE--PLSW--LVG 370 (457)
Q Consensus 299 ~~~vLDl~cG~G~~sl~lA~~---~-~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~--~~~~--~~~ 370 (457)
+.+|+=+ |.|.+|..+|+. . + .+|+++|.+++.++.++. . .+.++.+|..+. +... ...
T Consensus 39 ~~~v~Ii--G~G~~G~~~a~~L~~~~g-~~V~vid~~~~~~~~~~~---~-------g~~~~~gd~~~~~~l~~~~~~~~ 105 (183)
T 3c85_A 39 HAQVLIL--GMGRIGTGAYDELRARYG-KISLGIEIREEAAQQHRS---E-------GRNVISGDATDPDFWERILDTGH 105 (183)
T ss_dssp TCSEEEE--CCSHHHHHHHHHHHHHHC-SCEEEEESCHHHHHHHHH---T-------TCCEEECCTTCHHHHHTBCSCCC
T ss_pred CCcEEEE--CCCHHHHHHHHHHHhccC-CeEEEEECCHHHHHHHHH---C-------CCCEEEcCCCCHHHHHhccCCCC
Confidence 5567644 668888777753 2 3 379999999988776542 1 134567776542 2222 356
Q ss_pred ccEEEECCCCCCccHHHHHHHHhcCCCCcEEE
Q 044572 371 SDVLVVDPPRKGLDSSLVHALQSIGSAERKAK 402 (457)
Q Consensus 371 ~D~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivy 402 (457)
+|+||+--|-......++..++...+...++.
T Consensus 106 ad~vi~~~~~~~~~~~~~~~~~~~~~~~~ii~ 137 (183)
T 3c85_A 106 VKLVLLAMPHHQGNQTALEQLQRRNYKGQIAA 137 (183)
T ss_dssp CCEEEECCSSHHHHHHHHHHHHHTTCCSEEEE
T ss_pred CCEEEEeCCChHHHHHHHHHHHHHCCCCEEEE
Confidence 89888854432222234555666653334443
No 342
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=76.09 E-value=3 Score=40.64 Aligned_cols=97 Identities=16% Similarity=0.089 Sum_probs=57.5
Q ss_pred CCCCCeEEEEcccc-cHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcC---ccccc--C
Q 044572 296 VPYGASVTDLYAGA-GVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIE---PLSWL--V 369 (457)
Q Consensus 296 ~~~~~~vLDl~cG~-G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~---~~~~~--~ 369 (457)
+.+|++||=.|+|. |.+++.+|+..|+++|+++|.+++-++.+++- + .+ .++..+-.++ +.+.. .
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l----G---a~--~vi~~~~~~~~~~v~~~t~g~ 234 (352)
T 3fpc_A 164 IKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEY----G---AT--DIINYKNGDIVEQILKATDGK 234 (352)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHH----T---CC--EEECGGGSCHHHHHHHHTTTC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHh----C---Cc--eEEcCCCcCHHHHHHHHcCCC
Confidence 34788888887753 77777888877777899999999988877652 1 12 2232222221 11111 2
Q ss_pred CccEEEECCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 370 GSDVLVVDPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 370 ~~D~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
.+|+||- - .|-...+...+..+++.++++.+.
T Consensus 235 g~D~v~d-~--~g~~~~~~~~~~~l~~~G~~v~~G 266 (352)
T 3fpc_A 235 GVDKVVI-A--GGDVHTFAQAVKMIKPGSDIGNVN 266 (352)
T ss_dssp CEEEEEE-C--SSCTTHHHHHHHHEEEEEEEEECC
T ss_pred CCCEEEE-C--CCChHHHHHHHHHHhcCCEEEEec
Confidence 5898874 2 222223445555565556666553
No 343
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=75.82 E-value=14 Score=35.31 Aligned_cols=106 Identities=13% Similarity=0.034 Sum_probs=61.6
Q ss_pred CCCeEEEEcccccHHHHHHHhh---CCCCEEEEEeCCHHHHHHHHHHHhhCCC-CCCCcEEEEEccCCcC--cccccCCc
Q 044572 298 YGASVTDLYAGAGVIGLSLAAA---RKCRSVKCVEINKESQLSFEKTVSRLPK-SVDGNISWHNADNSIE--PLSWLVGS 371 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~---~~~~~V~gVE~~~~av~~A~~Na~~~~~-~~~~nv~~~~~d~~~~--~~~~~~~~ 371 (457)
.+++|| +-.|+|.+|..+++. .| .+|++++.++.........+..... ....+++++.+|+.+. +......+
T Consensus 24 ~~~~vl-VtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 101 (351)
T 3ruf_A 24 SPKTWL-ITGVAGFIGSNLLEKLLKLN-QVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGV 101 (351)
T ss_dssp SCCEEE-EETTTSHHHHHHHHHHHHTT-CEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTC
T ss_pred CCCeEE-EECCCcHHHHHHHHHHHHCC-CEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCC
Confidence 467777 667889999888753 23 5899999854322111111221000 0004689999998763 22234578
Q ss_pred cEEEECCCCCCc-----------------cHHHHHHHHhcCCCCcEEEEecc
Q 044572 372 DVLVVDPPRKGL-----------------DSSLVHALQSIGSAERKAKSLSE 406 (457)
Q Consensus 372 D~vi~DPPR~Gl-----------------~~~v~~~l~~~~~~~~ivyvs~~ 406 (457)
|+||.--..... ...+++++.+.. .+++||+|+.
T Consensus 102 d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~v~~SS~ 152 (351)
T 3ruf_A 102 DHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQ-VQSFTYAASS 152 (351)
T ss_dssp SEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEG
T ss_pred CEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEecH
Confidence 998864432111 112566666664 7899999853
No 344
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=75.25 E-value=4.2 Score=40.00 Aligned_cols=97 Identities=13% Similarity=0.085 Sum_probs=58.8
Q ss_pred CCCCCeEEEEcccc-cHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCc---Cccc---c-
Q 044572 296 VPYGASVTDLYAGA-GVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSI---EPLS---W- 367 (457)
Q Consensus 296 ~~~~~~vLDl~cG~-G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~---~~~~---~- 367 (457)
+.+|++||=.|+|. |.+++.+|+..|+++|+++|.+++-.+.+++- + .+ ..+..+-.+ .+.+ +
T Consensus 180 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l----G---a~--~vi~~~~~~~~~~i~~~~~~~ 250 (370)
T 4ej6_A 180 IKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEV----G---AT--ATVDPSAGDVVEAIAGPVGLV 250 (370)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH----T---CS--EEECTTSSCHHHHHHSTTSSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc----C---CC--EEECCCCcCHHHHHHhhhhcc
Confidence 35789988887754 77788888888888999999999988877652 1 11 222211111 1111 1
Q ss_pred cCCccEEEECCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 368 LVGSDVLVVDPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 368 ~~~~D~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
.+.+|+||- - .|....+...+..+++.++++.+.
T Consensus 251 ~gg~Dvvid-~--~G~~~~~~~~~~~l~~~G~vv~~G 284 (370)
T 4ej6_A 251 PGGVDVVIE-C--AGVAETVKQSTRLAKAGGTVVILG 284 (370)
T ss_dssp TTCEEEEEE-C--SCCHHHHHHHHHHEEEEEEEEECS
T ss_pred CCCCCEEEE-C--CCCHHHHHHHHHHhccCCEEEEEe
Confidence 136888774 2 343334555566666566666664
No 345
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=75.16 E-value=31 Score=31.68 Aligned_cols=92 Identities=9% Similarity=-0.009 Sum_probs=61.1
Q ss_pred CeEEEEcccccHHHHHHHhhC--CCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEEC
Q 044572 300 ASVTDLYAGAGVIGLSLAAAR--KCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVVD 377 (457)
Q Consensus 300 ~~vLDl~cG~G~~sl~lA~~~--~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~D 377 (457)
++||=.| + |.+|..+++.. ..-+|++++.++...+... . .+++++.+|+.+.. ...+|+||.-
T Consensus 6 ~~ilVtG-a-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~------~~~~~~~~D~~d~~---~~~~d~vi~~ 70 (286)
T 3ius_A 6 GTLLSFG-H-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIR----A------SGAEPLLWPGEEPS---LDGVTHLLIS 70 (286)
T ss_dssp CEEEEET-C-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHH----H------TTEEEEESSSSCCC---CTTCCEEEEC
T ss_pred CcEEEEC-C-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHh----h------CCCeEEEecccccc---cCCCCEEEEC
Confidence 5677777 4 99998887641 1248999999987553322 1 25789999998743 4678988875
Q ss_pred CCCCC----ccHHHHHHHHhc-CCCCcEEEEecc
Q 044572 378 PPRKG----LDSSLVHALQSI-GSAERKAKSLSE 406 (457)
Q Consensus 378 PPR~G----l~~~v~~~l~~~-~~~~~ivyvs~~ 406 (457)
-.... ....+++++... ...+++||+|+.
T Consensus 71 a~~~~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss~ 104 (286)
T 3ius_A 71 TAPDSGGDPVLAALGDQIAARAAQFRWVGYLSTT 104 (286)
T ss_dssp CCCBTTBCHHHHHHHHHHHHTGGGCSEEEEEEEG
T ss_pred CCccccccHHHHHHHHHHHhhcCCceEEEEeecc
Confidence 44221 123566777663 246899999853
No 346
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=74.73 E-value=4.6 Score=38.93 Aligned_cols=79 Identities=20% Similarity=0.170 Sum_probs=48.0
Q ss_pred CHHHHHHHHHHHHh---hCCCCCeEEEEcc------cccHHHHHHHhhCCC-CEEEEEeCCHHHHHHHHHHHhhCCCCCC
Q 044572 281 NTRAFDILLRKLQK---YVPYGASVTDLYA------GAGVIGLSLAAARKC-RSVKCVEINKESQLSFEKTVSRLPKSVD 350 (457)
Q Consensus 281 n~~~~~~l~~~i~~---~~~~~~~vLDl~c------G~G~~sl~lA~~~~~-~~V~gVE~~~~av~~A~~Na~~~~~~~~ 350 (457)
|-.-...|.+.+.. .++-|.+|||||| --|++ .+.+..+. ..|+++|+++-.. .
T Consensus 89 nv~kytqlcqyl~~~~~~vp~gmrVLDLGA~s~kg~APGS~--VLr~~~p~g~~VVavDL~~~~s--------------d 152 (344)
T 3r24_A 89 NVAKYTQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGTA--VLRQWLPTGTLLVDSDLNDFVS--------------D 152 (344)
T ss_dssp HHHHHHHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHHH--HHHHHSCTTCEEEEEESSCCBC--------------S
T ss_pred eHHHHHHHHHHhccccEeecCCCEEEeCCCCCCCCCCCcHH--HHHHhCCCCcEEEEeeCccccc--------------C
Confidence 44444445554422 1246899999997 44663 33332222 3899999977531 1
Q ss_pred CcEEEEEccCCcCcccccCCccEEEECC
Q 044572 351 GNISWHNADNSIEPLSWLVGSDVLVVDP 378 (457)
Q Consensus 351 ~nv~~~~~d~~~~~~~~~~~~D~vi~DP 378 (457)
.+ .+++||...... ..+||+|+.|=
T Consensus 153 a~-~~IqGD~~~~~~--~~k~DLVISDM 177 (344)
T 3r24_A 153 AD-STLIGDCATVHT--ANKWDLIISDM 177 (344)
T ss_dssp SS-EEEESCGGGEEE--SSCEEEEEECC
T ss_pred CC-eEEEcccccccc--CCCCCEEEecC
Confidence 12 459999765322 36799999984
No 347
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=73.88 E-value=7.9 Score=34.43 Aligned_cols=92 Identities=16% Similarity=0.097 Sum_probs=60.0
Q ss_pred eEEEEcccccHHHHHHHhhC--CCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCc-C--cccccCCccEEE
Q 044572 301 SVTDLYAGAGVIGLSLAAAR--KCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSI-E--PLSWLVGSDVLV 375 (457)
Q Consensus 301 ~vLDl~cG~G~~sl~lA~~~--~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~-~--~~~~~~~~D~vi 375 (457)
+|| +-.|+|.+|..+++.. ...+|++++.+++..+ . ..+++++.+|+.+ . +......+|+||
T Consensus 2 ~il-ItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~-------~-----~~~~~~~~~D~~d~~~~~~~~~~~~d~vi 68 (219)
T 3dqp_A 2 KIF-IVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVP-------Q-----YNNVKAVHFDVDWTPEEMAKQLHGMDAII 68 (219)
T ss_dssp EEE-EESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSC-------C-----CTTEEEEECCTTSCHHHHHTTTTTCSEEE
T ss_pred eEE-EECCCCHHHHHHHHHHHHCCCEEEEEECCccchh-------h-----cCCceEEEecccCCHHHHHHHHcCCCEEE
Confidence 344 4567899998888642 1248999999875321 1 1578999999987 2 223346789998
Q ss_pred ECCCCCC-------c--cHHHHHHHHhcCCCCcEEEEecc
Q 044572 376 VDPPRKG-------L--DSSLVHALQSIGSAERKAKSLSE 406 (457)
Q Consensus 376 ~DPPR~G-------l--~~~v~~~l~~~~~~~~ivyvs~~ 406 (457)
..-.... + ...+++++.+.. .+++||+|+.
T Consensus 69 ~~ag~~~~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~ 107 (219)
T 3dqp_A 69 NVSGSGGKSLLKVDLYGAVKLMQAAEKAE-VKRFILLSTI 107 (219)
T ss_dssp ECCCCTTSSCCCCCCHHHHHHHHHHHHTT-CCEEEEECCT
T ss_pred ECCcCCCCCcEeEeHHHHHHHHHHHHHhC-CCEEEEECcc
Confidence 8654221 1 224677776664 7899999853
No 348
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=73.37 E-value=4.2 Score=39.76 Aligned_cols=99 Identities=15% Similarity=0.109 Sum_probs=60.9
Q ss_pred CCCCCeEEEEcccc-cHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEE-----ccCCcCcccc--
Q 044572 296 VPYGASVTDLYAGA-GVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHN-----ADNSIEPLSW-- 367 (457)
Q Consensus 296 ~~~~~~vLDl~cG~-G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~-----~d~~~~~~~~-- 367 (457)
+.+|++||=.|+|. |.+++.+|+..|++.|+++|.+++-.+.+++-+. .-+.+.. .|..+.+.+.
T Consensus 177 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l~~-------~~~~~~~~~~~~~~~~~~v~~~t~ 249 (363)
T 3m6i_A 177 VRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICP-------EVVTHKVERLSAEESAKKIVESFG 249 (363)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHCT-------TCEEEECCSCCHHHHHHHHHHHTS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhch-------hcccccccccchHHHHHHHHHHhC
Confidence 34788888777743 7788888888888779999999999998886521 1122211 1111111111
Q ss_pred cCCccEEEECCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 368 LVGSDVLVVDPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 368 ~~~~D~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
...+|+||-- .|-...+...+..+++.++++.+.
T Consensus 250 g~g~Dvvid~---~g~~~~~~~~~~~l~~~G~iv~~G 283 (363)
T 3m6i_A 250 GIEPAVALEC---TGVESSIAAAIWAVKFGGKVFVIG 283 (363)
T ss_dssp SCCCSEEEEC---SCCHHHHHHHHHHSCTTCEEEECC
T ss_pred CCCCCEEEEC---CCChHHHHHHHHHhcCCCEEEEEc
Confidence 1368988752 233333556666677677777774
No 349
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=72.69 E-value=3.9 Score=40.16 Aligned_cols=96 Identities=13% Similarity=0.054 Sum_probs=58.4
Q ss_pred CCCCeEEEEccc-ccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccC--CcC---cccc-cC
Q 044572 297 PYGASVTDLYAG-AGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADN--SIE---PLSW-LV 369 (457)
Q Consensus 297 ~~~~~vLDl~cG-~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~--~~~---~~~~-~~ 369 (457)
.+|++||-.|+| +|.+++.+|+..|+++|+++|.+++-++.+++ ++ .+ ..+..+- .++ +.+. .+
T Consensus 191 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~----lG---a~--~vi~~~~~~~~~~~~~~~~~~~ 261 (374)
T 1cdo_A 191 EPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV----FG---AT--DFVNPNDHSEPISQVLSKMTNG 261 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TT---CC--EEECGGGCSSCHHHHHHHHHTS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----hC---Cc--eEEeccccchhHHHHHHHHhCC
Confidence 478899988874 36777778877777789999999998887763 22 12 2222111 111 1111 13
Q ss_pred CccEEEECCCCCCccHHHHHHHHhcCCC-CcEEEEe
Q 044572 370 GSDVLVVDPPRKGLDSSLVHALQSIGSA-ERKAKSL 404 (457)
Q Consensus 370 ~~D~vi~DPPR~Gl~~~v~~~l~~~~~~-~~ivyvs 404 (457)
.+|+||-- .|....+...+..+++. ++++.+.
T Consensus 262 g~D~vid~---~g~~~~~~~~~~~l~~~~G~iv~~G 294 (374)
T 1cdo_A 262 GVDFSLEC---VGNVGVMRNALESCLKGWGVSVLVG 294 (374)
T ss_dssp CBSEEEEC---SCCHHHHHHHHHTBCTTTCEEEECS
T ss_pred CCCEEEEC---CCCHHHHHHHHHHhhcCCcEEEEEc
Confidence 68988742 23333345566667666 7777764
No 350
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=72.49 E-value=45 Score=30.87 Aligned_cols=76 Identities=17% Similarity=0.105 Sum_probs=49.9
Q ss_pred CCeEEEEcccccHHHHHHHhhC--CCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCc--ccc-------
Q 044572 299 GASVTDLYAGAGVIGLSLAAAR--KCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEP--LSW------- 367 (457)
Q Consensus 299 ~~~vLDl~cG~G~~sl~lA~~~--~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~--~~~------- 367 (457)
++++| +-.|+|.+|..+++.. ...+|++++.+++.++.+.+.++.. ..++.++.+|+.+.. ...
T Consensus 44 ~k~vl-ITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 118 (285)
T 2c07_A 44 NKVAL-VTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF----GYESSGYAGDVSKKEEISEVINKILTE 118 (285)
T ss_dssp SCEEE-EESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTT----TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEE-EECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc----CCceeEEECCCCCHHHHHHHHHHHHHh
Confidence 56666 5567788888777531 1247999999988777666655542 246889999987631 111
Q ss_pred cCCccEEEECCC
Q 044572 368 LVGSDVLVVDPP 379 (457)
Q Consensus 368 ~~~~D~vi~DPP 379 (457)
.+..|+||.+.-
T Consensus 119 ~~~id~li~~Ag 130 (285)
T 2c07_A 119 HKNVDILVNNAG 130 (285)
T ss_dssp CSCCCEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 146899988653
No 351
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=72.25 E-value=7.7 Score=34.22 Aligned_cols=89 Identities=17% Similarity=0.060 Sum_probs=56.1
Q ss_pred EcccccHHHHHHHhh---CCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEECCCCC
Q 044572 305 LYAGAGVIGLSLAAA---RKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVVDPPRK 381 (457)
Q Consensus 305 l~cG~G~~sl~lA~~---~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~DPPR~ 381 (457)
+-.|+|.+|..+++. .| .+|++++.+++.++... .+++++.+|+.+........+|+||..-...
T Consensus 5 VtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~-----------~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~ 72 (221)
T 3ew7_A 5 IIGATGRAGSRILEEAKNRG-HEVTAIVRNAGKITQTH-----------KDINILQKDIFDLTLSDLSDQNVVVDAYGIS 72 (221)
T ss_dssp EETTTSHHHHHHHHHHHHTT-CEEEEEESCSHHHHHHC-----------SSSEEEECCGGGCCHHHHTTCSEEEECCCSS
T ss_pred EEcCCchhHHHHHHHHHhCC-CEEEEEEcCchhhhhcc-----------CCCeEEeccccChhhhhhcCCCEEEECCcCC
Confidence 455688888877753 23 48999999976543211 3578999998865433346789988754321
Q ss_pred --C------ccHHHHHHHHhcCCCCcEEEEecc
Q 044572 382 --G------LDSSLVHALQSIGSAERKAKSLSE 406 (457)
Q Consensus 382 --G------l~~~v~~~l~~~~~~~~ivyvs~~ 406 (457)
. ....+++++.+.. .+++|++||.
T Consensus 73 ~~~~~~~~~~~~~l~~a~~~~~-~~~~v~~SS~ 104 (221)
T 3ew7_A 73 PDEAEKHVTSLDHLISVLNGTV-SPRLLVVGGA 104 (221)
T ss_dssp TTTTTSHHHHHHHHHHHHCSCC-SSEEEEECCC
T ss_pred ccccchHHHHHHHHHHHHHhcC-CceEEEEecc
Confidence 1 1123455554443 6899999753
No 352
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=71.74 E-value=4.3 Score=39.90 Aligned_cols=96 Identities=17% Similarity=0.070 Sum_probs=57.9
Q ss_pred CCCCeEEEEcccc-cHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccC--CcC---cccc-cC
Q 044572 297 PYGASVTDLYAGA-GVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADN--SIE---PLSW-LV 369 (457)
Q Consensus 297 ~~~~~vLDl~cG~-G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~--~~~---~~~~-~~ 369 (457)
.+|++||-.++|. |.+++.+|+..|+++|+++|.+++-++.+++ ++ .+ ..+..+- .++ +.+. ..
T Consensus 190 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~----lG---a~--~vi~~~~~~~~~~~~~~~~~~~ 260 (374)
T 2jhf_A 190 TQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE----VG---AT--ECVNPQDYKKPIQEVLTEMSNG 260 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TT---CS--EEECGGGCSSCHHHHHHHHTTS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----hC---Cc--eEecccccchhHHHHHHHHhCC
Confidence 4788999888643 6677777877777789999999998887753 22 12 2222111 111 1111 13
Q ss_pred CccEEEECCCCCCccHHHHHHHHhcCCC-CcEEEEe
Q 044572 370 GSDVLVVDPPRKGLDSSLVHALQSIGSA-ERKAKSL 404 (457)
Q Consensus 370 ~~D~vi~DPPR~Gl~~~v~~~l~~~~~~-~~ivyvs 404 (457)
.+|+||-- .|....+...+..+++. ++++.+.
T Consensus 261 g~D~vid~---~g~~~~~~~~~~~l~~~~G~iv~~G 293 (374)
T 2jhf_A 261 GVDFSFEV---IGRLDTMVTALSCCQEAYGVSVIVG 293 (374)
T ss_dssp CBSEEEEC---SCCHHHHHHHHHHBCTTTCEEEECS
T ss_pred CCcEEEEC---CCCHHHHHHHHHHhhcCCcEEEEec
Confidence 68988742 23233345566667666 7777764
No 353
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=71.26 E-value=5.5 Score=38.54 Aligned_cols=97 Identities=12% Similarity=0.110 Sum_probs=57.6
Q ss_pred CCCCCeEEEEcccc-cHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccC--CcCccccc--CC
Q 044572 296 VPYGASVTDLYAGA-GVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADN--SIEPLSWL--VG 370 (457)
Q Consensus 296 ~~~~~~vLDl~cG~-G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~--~~~~~~~~--~~ 370 (457)
+.+|++||=.++|. |.+++.+|+..+..+|+++|.+++-++.+++ ++ .+ .++..+- .+.+.+.. ..
T Consensus 169 ~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~----lG---a~--~~i~~~~~~~~~v~~~t~g~g 239 (345)
T 3jv7_A 169 LGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALARE----VG---AD--AAVKSGAGAADAIRELTGGQG 239 (345)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHH----TT---CS--EEEECSTTHHHHHHHHHGGGC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----cC---CC--EEEcCCCcHHHHHHHHhCCCC
Confidence 45789999887753 7777778876656799999999998887764 22 12 2222221 11111111 26
Q ss_pred ccEEEECCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 371 SDVLVVDPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 371 ~D~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
+|+||-- .|-...+...+..+++.++++.+.
T Consensus 240 ~d~v~d~---~G~~~~~~~~~~~l~~~G~iv~~G 270 (345)
T 3jv7_A 240 ATAVFDF---VGAQSTIDTAQQVVAVDGHISVVG 270 (345)
T ss_dssp EEEEEES---SCCHHHHHHHHHHEEEEEEEEECS
T ss_pred CeEEEEC---CCCHHHHHHHHHHHhcCCEEEEEC
Confidence 8887742 233333455566666566666654
No 354
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=71.10 E-value=4.5 Score=39.77 Aligned_cols=96 Identities=14% Similarity=0.038 Sum_probs=58.4
Q ss_pred CCCCeEEEEccc-ccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccC--CcC---cccc-cC
Q 044572 297 PYGASVTDLYAG-AGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADN--SIE---PLSW-LV 369 (457)
Q Consensus 297 ~~~~~vLDl~cG-~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~--~~~---~~~~-~~ 369 (457)
.+|++||=.|+| .|.+++.+|+..|+++|+++|.+++-++.+++ ++ .+ ..+..+- .++ +.+. ..
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lG---a~--~vi~~~~~~~~~~~~v~~~~~~ 264 (376)
T 1e3i_A 194 TPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA----LG---AT--DCLNPRELDKPVQDVITELTAG 264 (376)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TT---CS--EEECGGGCSSCHHHHHHHHHTS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----hC---Cc--EEEccccccchHHHHHHHHhCC
Confidence 478899988875 46777778877777799999999998877753 22 12 2222111 111 1111 13
Q ss_pred CccEEEECCCCCCccHHHHHHHHhcCCC-CcEEEEe
Q 044572 370 GSDVLVVDPPRKGLDSSLVHALQSIGSA-ERKAKSL 404 (457)
Q Consensus 370 ~~D~vi~DPPR~Gl~~~v~~~l~~~~~~-~~ivyvs 404 (457)
.+|+||- - .|-...+...+..+++. ++++.+.
T Consensus 265 g~Dvvid-~--~G~~~~~~~~~~~l~~~~G~iv~~G 297 (376)
T 1e3i_A 265 GVDYSLD-C--AGTAQTLKAAVDCTVLGWGSCTVVG 297 (376)
T ss_dssp CBSEEEE-S--SCCHHHHHHHHHTBCTTTCEEEECC
T ss_pred CccEEEE-C--CCCHHHHHHHHHHhhcCCCEEEEEC
Confidence 6898874 2 23333345566667666 7777764
No 355
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=71.07 E-value=3.8 Score=40.29 Aligned_cols=96 Identities=17% Similarity=0.028 Sum_probs=58.0
Q ss_pred CCCCeEEEEccc-ccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccC--CcC---cccc-cC
Q 044572 297 PYGASVTDLYAG-AGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADN--SIE---PLSW-LV 369 (457)
Q Consensus 297 ~~~~~vLDl~cG-~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~--~~~---~~~~-~~ 369 (457)
.+|++||=.|+| .|.+++.+|+..|+++|+++|.+++-++.+++ ++ .+ ..+..+- .++ +.+. .+
T Consensus 190 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lG---a~--~vi~~~~~~~~~~~~i~~~t~g 260 (373)
T 1p0f_A 190 TPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE----LG---AT--ECLNPKDYDKPIYEVICEKTNG 260 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH----TT---CS--EEECGGGCSSCHHHHHHHHTTS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH----cC---Cc--EEEecccccchHHHHHHHHhCC
Confidence 478999988874 36677777777777789999999998887763 22 12 2222211 111 1111 13
Q ss_pred CccEEEECCCCCCccHHHHHHHHhcCCC-CcEEEEe
Q 044572 370 GSDVLVVDPPRKGLDSSLVHALQSIGSA-ERKAKSL 404 (457)
Q Consensus 370 ~~D~vi~DPPR~Gl~~~v~~~l~~~~~~-~~ivyvs 404 (457)
.+|+||- - .|....+...+..+++. ++++.+.
T Consensus 261 g~Dvvid-~--~g~~~~~~~~~~~l~~~~G~iv~~G 293 (373)
T 1p0f_A 261 GVDYAVE-C--AGRIETMMNALQSTYCGSGVTVVLG 293 (373)
T ss_dssp CBSEEEE-C--SCCHHHHHHHHHTBCTTTCEEEECC
T ss_pred CCCEEEE-C--CCCHHHHHHHHHHHhcCCCEEEEEc
Confidence 6898874 2 23333345556667666 7777764
No 356
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=70.11 E-value=4.8 Score=43.04 Aligned_cols=104 Identities=13% Similarity=0.021 Sum_probs=62.5
Q ss_pred CeEEEEcccccHHHHHHHhhC----------CC--CEEEEEeC---CHHHHHHHHH-----------HHhhCCC------
Q 044572 300 ASVTDLYAGAGVIGLSLAAAR----------KC--RSVKCVEI---NKESQLSFEK-----------TVSRLPK------ 347 (457)
Q Consensus 300 ~~vLDl~cG~G~~sl~lA~~~----------~~--~~V~gVE~---~~~av~~A~~-----------Na~~~~~------ 347 (457)
-+|+|+|-|+|...+...... .. -+++++|. +++-+..+-. -.+....
T Consensus 68 ~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 147 (676)
T 3ps9_A 68 FVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGCH 147 (676)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEEE
T ss_pred eEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCce
Confidence 479999999998766665431 11 35899999 6665552221 1111100
Q ss_pred -----CCCCcEEEEEccCCcCcccc----cCCccEEEECCCCCCc-----cHHHHHHHHhcCCCCcEEEE
Q 044572 348 -----SVDGNISWHNADNSIEPLSW----LVGSDVLVVDPPRKGL-----DSSLVHALQSIGSAERKAKS 403 (457)
Q Consensus 348 -----~~~~nv~~~~~d~~~~~~~~----~~~~D~vi~DPPR~Gl-----~~~v~~~l~~~~~~~~ivyv 403 (457)
++.-.++...||+.+.+.++ ...+|++++|+-.... +.++++.|.++..++..+..
T Consensus 148 ~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t 217 (676)
T 3ps9_A 148 RLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT 217 (676)
T ss_dssp EEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEEE
T ss_pred EEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEEe
Confidence 00123557778887766654 2569999999954322 34677777776545555444
No 357
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=69.63 E-value=32 Score=30.92 Aligned_cols=74 Identities=20% Similarity=0.200 Sum_probs=48.7
Q ss_pred CCeEEEEcccccHHHHHHHhh---CCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCc--ccc------
Q 044572 299 GASVTDLYAGAGVIGLSLAAA---RKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEP--LSW------ 367 (457)
Q Consensus 299 ~~~vLDl~cG~G~~sl~lA~~---~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~--~~~------ 367 (457)
++++| +-.|+|.+|..+++. .| .+|++++.+++..+...+.++. ..++.++.+|+.+.. ...
T Consensus 6 ~k~vl-VtGasggiG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~ 78 (251)
T 1zk4_A 6 GKVAI-ITGGTLGIGLAIATKFVEEG-AKVMITGRHSDVGEKAAKSVGT-----PDQIQFFQHDSSDEDGWTKLFDATEK 78 (251)
T ss_dssp TCEEE-ETTTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHCC-----TTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CcEEE-EeCCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHhhc-----cCceEEEECCCCCHHHHHHHHHHHHH
Confidence 55666 566778888777653 23 4799999998877665554432 146899999987631 111
Q ss_pred -cCCccEEEECCC
Q 044572 368 -LVGSDVLVVDPP 379 (457)
Q Consensus 368 -~~~~D~vi~DPP 379 (457)
.+..|+||.+.-
T Consensus 79 ~~~~id~li~~Ag 91 (251)
T 1zk4_A 79 AFGPVSTLVNNAG 91 (251)
T ss_dssp HHSSCCEEEECCC
T ss_pred HhCCCCEEEECCC
Confidence 136899988653
No 358
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=69.60 E-value=4.2 Score=39.88 Aligned_cols=96 Identities=14% Similarity=-0.002 Sum_probs=57.4
Q ss_pred CCCCeEEEEccc-ccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEcc-----CCcCcccc-cC
Q 044572 297 PYGASVTDLYAG-AGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNAD-----NSIEPLSW-LV 369 (457)
Q Consensus 297 ~~~~~vLDl~cG-~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d-----~~~~~~~~-~~ 369 (457)
.+|++||-.++| +|.+++.+|+..|+++|+++|.+++-++.+++- + .+ ..+..+ +.+.+.+. .+
T Consensus 189 ~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~l----G---a~--~vi~~~~~~~~~~~~v~~~~~~ 259 (373)
T 2fzw_A 189 EPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEF----G---AT--ECINPQDFSKPIQEVLIEMTDG 259 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHH----T---CS--EEECGGGCSSCHHHHHHHHTTS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc----C---Cc--eEeccccccccHHHHHHHHhCC
Confidence 478899988764 366777777767777899999999988887631 1 12 222211 11111111 13
Q ss_pred CccEEEECCCCCCccHHHHHHHHhcCCC-CcEEEEe
Q 044572 370 GSDVLVVDPPRKGLDSSLVHALQSIGSA-ERKAKSL 404 (457)
Q Consensus 370 ~~D~vi~DPPR~Gl~~~v~~~l~~~~~~-~~ivyvs 404 (457)
.+|+||-- .|....+...+..+++. ++++.+.
T Consensus 260 g~D~vid~---~g~~~~~~~~~~~l~~~~G~iv~~G 292 (373)
T 2fzw_A 260 GVDYSFEC---IGNVKVMRAALEACHKGWGVSVVVG 292 (373)
T ss_dssp CBSEEEEC---SCCHHHHHHHHHTBCTTTCEEEECS
T ss_pred CCCEEEEC---CCcHHHHHHHHHhhccCCcEEEEEe
Confidence 68988742 23333345556667666 7777764
No 359
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=69.27 E-value=16 Score=32.30 Aligned_cols=95 Identities=15% Similarity=0.089 Sum_probs=59.7
Q ss_pred EEEEcccccHHHHHHHhh----CCCCEEEEEeCCHH-HHHHHHHHHhhCCCCCCCcEEEEEccCCcC--cccccCCccEE
Q 044572 302 VTDLYAGAGVIGLSLAAA----RKCRSVKCVEINKE-SQLSFEKTVSRLPKSVDGNISWHNADNSIE--PLSWLVGSDVL 374 (457)
Q Consensus 302 vLDl~cG~G~~sl~lA~~----~~~~~V~gVE~~~~-av~~A~~Na~~~~~~~~~nv~~~~~d~~~~--~~~~~~~~D~v 374 (457)
|| +-.|+|.+|..+++. .| .+|++++.+++ .++... .. ..++.++.+|+.+. +.......|+|
T Consensus 8 vl-VtGasg~iG~~~~~~l~~~~g-~~V~~~~r~~~~~~~~~~---~~-----~~~~~~~~~D~~d~~~~~~~~~~~d~v 77 (221)
T 3r6d_A 8 IT-ILGAAGQIAQXLTATLLTYTD-MHITLYGRQLKTRIPPEI---ID-----HERVTVIEGSFQNPGXLEQAVTNAEVV 77 (221)
T ss_dssp EE-EESTTSHHHHHHHHHHHHHCC-CEEEEEESSHHHHSCHHH---HT-----STTEEEEECCTTCHHHHHHHHTTCSEE
T ss_pred EE-EEeCCcHHHHHHHHHHHhcCC-ceEEEEecCccccchhhc---cC-----CCceEEEECCCCCHHHHHHHHcCCCEE
Confidence 55 455678877776642 33 48999999987 543322 11 14689999999763 12233578999
Q ss_pred EECCCCCCc-cHHHHHHHHhcCCCCcEEEEeccC
Q 044572 375 VVDPPRKGL-DSSLVHALQSIGSAERKAKSLSES 407 (457)
Q Consensus 375 i~DPPR~Gl-~~~v~~~l~~~~~~~~ivyvs~~~ 407 (457)
|..-....+ ...+++.+.+.. .+++|++|+..
T Consensus 78 v~~ag~~n~~~~~~~~~~~~~~-~~~iv~iSs~~ 110 (221)
T 3r6d_A 78 FVGAMESGSDMASIVKALSRXN-IRRVIGVSMAG 110 (221)
T ss_dssp EESCCCCHHHHHHHHHHHHHTT-CCEEEEEEETT
T ss_pred EEcCCCCChhHHHHHHHHHhcC-CCeEEEEeece
Confidence 987653222 234555665554 68999998543
No 360
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=69.26 E-value=6.9 Score=38.90 Aligned_cols=44 Identities=16% Similarity=0.120 Sum_probs=35.1
Q ss_pred CCCCeEEEEccc-ccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHH
Q 044572 297 PYGASVTDLYAG-AGVIGLSLAAARKCRSVKCVEINKESQLSFEK 340 (457)
Q Consensus 297 ~~~~~vLDl~cG-~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~ 340 (457)
.+|++||=.|+| +|.+++.+|+..|+++|+++|.+++-++.+++
T Consensus 212 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~ 256 (404)
T 3ip1_A 212 RPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKE 256 (404)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH
Confidence 468888877763 36677778877788899999999998888764
No 361
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=69.06 E-value=31 Score=30.90 Aligned_cols=76 Identities=14% Similarity=0.079 Sum_probs=49.3
Q ss_pred CCeEEEEcccccHHHHHHHhh---CCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCc--ccc------
Q 044572 299 GASVTDLYAGAGVIGLSLAAA---RKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEP--LSW------ 367 (457)
Q Consensus 299 ~~~vLDl~cG~G~~sl~lA~~---~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~--~~~------ 367 (457)
++++| +-.|+|.+|..+++. .| .+|++++.+++..+...+.++.. ...++.++.+|+.+.. ...
T Consensus 7 ~~~vl-VtGasggiG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~ 81 (248)
T 2pnf_A 7 GKVSL-VTGSTRGIGRAIAEKLASAG-STVIITGTSGERAKAVAEEIANK---YGVKAHGVEMNLLSEESINKAFEEIYN 81 (248)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHHHHH---HCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEE-EECCCchHHHHHHHHHHHCC-CEEEEEeCChHHHHHHHHHHHhh---cCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 55666 566788888877753 23 48999999988776665544320 0136889999987631 111
Q ss_pred -cCCccEEEECCC
Q 044572 368 -LVGSDVLVVDPP 379 (457)
Q Consensus 368 -~~~~D~vi~DPP 379 (457)
.+..|+||.+--
T Consensus 82 ~~~~~d~vi~~Ag 94 (248)
T 2pnf_A 82 LVDGIDILVNNAG 94 (248)
T ss_dssp HSSCCSEEEECCC
T ss_pred hcCCCCEEEECCC
Confidence 136899988654
No 362
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=68.54 E-value=16 Score=34.33 Aligned_cols=89 Identities=11% Similarity=0.149 Sum_probs=54.8
Q ss_pred CeEEEEcccccHHHHHHHhh---CCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcC--cccccCCccEE
Q 044572 300 ASVTDLYAGAGVIGLSLAAA---RKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIE--PLSWLVGSDVL 374 (457)
Q Consensus 300 ~~vLDl~cG~G~~sl~lA~~---~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~--~~~~~~~~D~v 374 (457)
++|| +-.|+|.+|..+++. .+ -+|++++.++...+ + .+++++.+|+. . +......+|+|
T Consensus 3 ~~vl-VtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~-----~--------~~~~~~~~Dl~-~~~~~~~~~~~d~V 66 (311)
T 3m2p_A 3 LKIA-VTGGTGFLGQYVVESIKNDG-NTPIILTRSIGNKA-----I--------NDYEYRVSDYT-LEDLINQLNDVDAV 66 (311)
T ss_dssp CEEE-EETTTSHHHHHHHHHHHHTT-CEEEEEESCCC------------------CCEEEECCCC-HHHHHHHTTTCSEE
T ss_pred CEEE-EECCCcHHHHHHHHHHHhCC-CEEEEEeCCCCccc-----C--------CceEEEEcccc-HHHHHHhhcCCCEE
Confidence 3555 566789998887753 22 48999999833221 1 14688999986 2 11234578988
Q ss_pred EECCCCCCc-------------cHHHHHHHHhcCCCCcEEEEec
Q 044572 375 VVDPPRKGL-------------DSSLVHALQSIGSAERKAKSLS 405 (457)
Q Consensus 375 i~DPPR~Gl-------------~~~v~~~l~~~~~~~~ivyvs~ 405 (457)
|.--...+. ...+++++.+.. .+++||+||
T Consensus 67 ih~a~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~~r~v~~SS 109 (311)
T 3m2p_A 67 VHLAATRGSQGKISEFHDNEILTQNLYDACYENN-ISNIVYAST 109 (311)
T ss_dssp EECCCCCCSSSCGGGTHHHHHHHHHHHHHHHHTT-CCEEEEEEE
T ss_pred EEccccCCCCChHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEcc
Confidence 874321111 124566666664 789999985
No 363
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=68.51 E-value=6.9 Score=38.55 Aligned_cols=44 Identities=20% Similarity=0.153 Sum_probs=35.0
Q ss_pred CCCCCeEEEEccc-ccHHHHHHHhhCCCCEEEEEeCCHHHHHHHH
Q 044572 296 VPYGASVTDLYAG-AGVIGLSLAAARKCRSVKCVEINKESQLSFE 339 (457)
Q Consensus 296 ~~~~~~vLDl~cG-~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~ 339 (457)
+.+|++||-.++| .|.+++.+|+..|+.+|++++.+++-++.++
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~ 237 (380)
T 1vj0_A 193 SFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE 237 (380)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH
Confidence 3468899988864 5777778887777669999999999888776
No 364
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=68.25 E-value=4.5 Score=39.29 Aligned_cols=91 Identities=16% Similarity=0.099 Sum_probs=54.5
Q ss_pred CCCCCeEEEEcccc-cHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEE
Q 044572 296 VPYGASVTDLYAGA-GVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVL 374 (457)
Q Consensus 296 ~~~~~~vLDl~cG~-G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~v 374 (457)
+.+|++||-.|+|. |.+++.+|+..|+ +|++++.+++-.+.+++ ++ .+. .+ .|... +...+|+|
T Consensus 174 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~----lG---a~~--v~-~~~~~----~~~~~D~v 238 (348)
T 3two_A 174 VTKGTKVGVAGFGGLGSMAVKYAVAMGA-EVSVFARNEHKKQDALS----MG---VKH--FY-TDPKQ----CKEELDFI 238 (348)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSSTTHHHHHH----TT---CSE--EE-SSGGG----CCSCEEEE
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHh----cC---CCe--ec-CCHHH----HhcCCCEE
Confidence 35789999888753 7777778877776 89999999998887764 22 122 22 33221 12368887
Q ss_pred EECCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 375 VVDPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 375 i~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
|---... ..+...+..+++.++++.+.
T Consensus 239 id~~g~~---~~~~~~~~~l~~~G~iv~~G 265 (348)
T 3two_A 239 ISTIPTH---YDLKDYLKLLTYNGDLALVG 265 (348)
T ss_dssp EECCCSC---CCHHHHHTTEEEEEEEEECC
T ss_pred EECCCcH---HHHHHHHHHHhcCCEEEEEC
Confidence 7422211 12334444555456666653
No 365
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=67.20 E-value=3.6 Score=40.55 Aligned_cols=96 Identities=15% Similarity=0.048 Sum_probs=58.7
Q ss_pred CCCCeEEEEccc-ccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEcc--CCcC---cccc-cC
Q 044572 297 PYGASVTDLYAG-AGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNAD--NSIE---PLSW-LV 369 (457)
Q Consensus 297 ~~~~~vLDl~cG-~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d--~~~~---~~~~-~~ 369 (457)
.+|++||=.|+| +|.+++.+|+..|+++|+++|.+++-++.|++ ++ .+ .++..+ -.++ +.+. .+
T Consensus 192 ~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~----lG---a~--~vi~~~~~~~~~~~~i~~~~~g 262 (378)
T 3uko_A 192 EPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKK----FG---VN--EFVNPKDHDKPIQEVIVDLTDG 262 (378)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHT----TT---CC--EEECGGGCSSCHHHHHHHHTTS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----cC---Cc--EEEccccCchhHHHHHHHhcCC
Confidence 468888888875 47777788877777799999999998887753 22 12 223221 1111 1111 13
Q ss_pred CccEEEECCCCCCccHHHHHHHHhcCCC-CcEEEEe
Q 044572 370 GSDVLVVDPPRKGLDSSLVHALQSIGSA-ERKAKSL 404 (457)
Q Consensus 370 ~~D~vi~DPPR~Gl~~~v~~~l~~~~~~-~~ivyvs 404 (457)
.+|+||-- .|-...+...+..+++. ++++.+.
T Consensus 263 g~D~vid~---~g~~~~~~~~~~~l~~g~G~iv~~G 295 (378)
T 3uko_A 263 GVDYSFEC---IGNVSVMRAALECCHKGWGTSVIVG 295 (378)
T ss_dssp CBSEEEEC---SCCHHHHHHHHHTBCTTTCEEEECS
T ss_pred CCCEEEEC---CCCHHHHHHHHHHhhccCCEEEEEc
Confidence 68988742 34333455566667654 6777764
No 366
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=67.20 E-value=5.3 Score=39.28 Aligned_cols=44 Identities=20% Similarity=0.212 Sum_probs=35.0
Q ss_pred CCCCCeEEEEccc-ccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHH
Q 044572 296 VPYGASVTDLYAG-AGVIGLSLAAARKCRSVKCVEINKESQLSFEK 340 (457)
Q Consensus 296 ~~~~~~vLDl~cG-~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~ 340 (457)
+.+|++||-.|+| +|.+++.+|+..|+ +|++++.+++-++.+++
T Consensus 192 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~Vi~~~~~~~~~~~a~~ 236 (369)
T 1uuf_A 192 AGPGKKVGVVGIGGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKA 236 (369)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH
Confidence 4578999998876 37777788877776 59999999998887764
No 367
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=67.15 E-value=16 Score=30.63 Aligned_cols=95 Identities=7% Similarity=0.077 Sum_probs=53.2
Q ss_pred CeEEEEcccccHHHHHHHhhC--CCCEEEEEeCC-HHHHHHHHHHHhhCCCCCCCcEEEEEccCCcC--cccc-cCCccE
Q 044572 300 ASVTDLYAGAGVIGLSLAAAR--KCRSVKCVEIN-KESQLSFEKTVSRLPKSVDGNISWHNADNSIE--PLSW-LVGSDV 373 (457)
Q Consensus 300 ~~vLDl~cG~G~~sl~lA~~~--~~~~V~gVE~~-~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~--~~~~-~~~~D~ 373 (457)
.+|+= ||.|.+|..+++.. ....|+.||.+ ++.++..+.... ..+.++.||+.+. +... ....|+
T Consensus 4 ~~vlI--~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~-------~~~~~i~gd~~~~~~l~~a~i~~ad~ 74 (153)
T 1id1_A 4 DHFIV--CGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG-------DNADVIPGDSNDSSVLKKAGIDRCRA 74 (153)
T ss_dssp SCEEE--ECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC-------TTCEEEESCTTSHHHHHHHTTTTCSE
T ss_pred CcEEE--ECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhc-------CCCeEEEcCCCCHHHHHHcChhhCCE
Confidence 34543 46688888877531 12479999998 554544443221 2368899998753 2221 357898
Q ss_pred EEECCCCCCccHHHHHHHHhcCCCCcEEEE
Q 044572 374 LVVDPPRKGLDSSLVHALQSIGSAERKAKS 403 (457)
Q Consensus 374 vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyv 403 (457)
||+--+.......+...++.+.+..+++..
T Consensus 75 vi~~~~~d~~n~~~~~~a~~~~~~~~ii~~ 104 (153)
T 1id1_A 75 ILALSDNDADNAFVVLSAKDMSSDVKTVLA 104 (153)
T ss_dssp EEECSSCHHHHHHHHHHHHHHTSSSCEEEE
T ss_pred EEEecCChHHHHHHHHHHHHHCCCCEEEEE
Confidence 887655332223344455555433444443
No 368
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=67.13 E-value=25 Score=32.73 Aligned_cols=75 Identities=20% Similarity=0.128 Sum_probs=50.7
Q ss_pred CCCeEEEEcccccH---HHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcc---------
Q 044572 298 YGASVTDLYAGAGV---IGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPL--------- 365 (457)
Q Consensus 298 ~~~~vLDl~cG~G~---~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~--------- 365 (457)
+|+++|==|++.|. ++..||+. | .+|+.+|.+++.++.+.+.++..+ .++.++.+|+.+.-.
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la~~-G-a~Vv~~~~~~~~~~~~~~~i~~~g----~~~~~~~~Dvt~~~~v~~~~~~~~ 79 (254)
T 4fn4_A 6 KNKVVIVTGAGSGIGRAIAKKFALN-D-SIVVAVELLEDRLNQIVQELRGMG----KEVLGVKADVSKKKDVEEFVRRTF 79 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHHHTT----CCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHc-C-CEEEEEECCHHHHHHHHHHHHhcC----CcEEEEEccCCCHHHHHHHHHHHH
Confidence 47777766655442 44445543 3 489999999999988888776632 468899999986311
Q ss_pred cccCCccEEEECC
Q 044572 366 SWLVGSDVLVVDP 378 (457)
Q Consensus 366 ~~~~~~D~vi~DP 378 (457)
+..++.|++|-|-
T Consensus 80 ~~~G~iDiLVNNA 92 (254)
T 4fn4_A 80 ETYSRIDVLCNNA 92 (254)
T ss_dssp HHHSCCCEEEECC
T ss_pred HHcCCCCEEEECC
Confidence 1125789988754
No 369
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=67.05 E-value=8.6 Score=36.61 Aligned_cols=101 Identities=18% Similarity=0.150 Sum_probs=59.6
Q ss_pred CCeEEEEcccccHHHHHHHhh---CCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCc--cccc--CCc
Q 044572 299 GASVTDLYAGAGVIGLSLAAA---RKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEP--LSWL--VGS 371 (457)
Q Consensus 299 ~~~vLDl~cG~G~~sl~lA~~---~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~--~~~~--~~~ 371 (457)
+++|| +-.|+|.+|..+++. .| .+|++++.+........+.+... ...++.++.+|+.+.. .... ...
T Consensus 5 ~~~vl-VTGatG~iG~~l~~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 79 (341)
T 3enk_A 5 KGTIL-VTGGAGYIGSHTAVELLAHG-YDVVIADNLVNSKREAIARIEKI---TGKTPAFHETDVSDERALARIFDAHPI 79 (341)
T ss_dssp SCEEE-EETTTSHHHHHHHHHHHHTT-CEEEEECCCSSSCTHHHHHHHHH---HSCCCEEECCCTTCHHHHHHHHHHSCC
T ss_pred CcEEE-EecCCcHHHHHHHHHHHHCC-CcEEEEecCCcchHHHHHHHHhh---cCCCceEEEeecCCHHHHHHHHhccCC
Confidence 45666 566889988887753 23 48999988655433333332221 0135789999987631 1112 268
Q ss_pred cEEEECCCCCCcc-----------------HHHHHHHHhcCCCCcEEEEec
Q 044572 372 DVLVVDPPRKGLD-----------------SSLVHALQSIGSAERKAKSLS 405 (457)
Q Consensus 372 D~vi~DPPR~Gl~-----------------~~v~~~l~~~~~~~~ivyvs~ 405 (457)
|+||..--..... ..+++++.+.. .+++||+||
T Consensus 80 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS 129 (341)
T 3enk_A 80 TAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERA-VKRIVFSSS 129 (341)
T ss_dssp CEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEE
T ss_pred cEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCC-CCEEEEEec
Confidence 9988755322110 12455555554 689999986
No 370
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=66.80 E-value=18 Score=33.82 Aligned_cols=105 Identities=8% Similarity=-0.065 Sum_probs=62.5
Q ss_pred CCeEEEEcccccHHHHHHHhh-------CCCCEEEEEeC-----CH----------------------HHHHHH---HHH
Q 044572 299 GASVTDLYAGAGVIGLSLAAA-------RKCRSVKCVEI-----NK----------------------ESQLSF---EKT 341 (457)
Q Consensus 299 ~~~vLDl~cG~G~~sl~lA~~-------~~~~~V~gVE~-----~~----------------------~av~~A---~~N 341 (457)
...|+++|+.-|.-++.+|.. ...++|+++|. .+ +.++.. .+|
T Consensus 70 pG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~ 149 (257)
T 3tos_A 70 PGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHEC 149 (257)
T ss_dssp CSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHT
T ss_pred CCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHhh
Confidence 357999999999988877642 12378999992 11 112221 122
Q ss_pred HhhCCCCCCCcEEEEEccCCcCcccc-----cCCccEEEECCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 342 VSRLPKSVDGNISWHNADNSIEPLSW-----LVGSDVLVVDPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 342 a~~~~~~~~~nv~~~~~d~~~~~~~~-----~~~~D~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
.+..+ ...++++++.|++.+.+..+ ...+|+|.+|=-...-....++.+...-.++++|.+-
T Consensus 150 ~~~~g-~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~Y~~t~~~le~~~p~l~~GGvIv~D 216 (257)
T 3tos_A 150 SDFFG-HVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDLYEPTKAVLEAIRPYLTKGSIVAFD 216 (257)
T ss_dssp TSTTT-TSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCCHHHHHHHHHHHGGGEEEEEEEEES
T ss_pred hhhcC-CCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcccchHHHHHHHHHHHhCCCcEEEEc
Confidence 22221 12378999999998766543 1359999999842111112344444433477777774
No 371
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=66.50 E-value=39 Score=30.25 Aligned_cols=74 Identities=19% Similarity=0.165 Sum_probs=47.5
Q ss_pred CCeEEEEcccccHHHHHHHhh---CCCCEEEEEeCCHHHHHHHHHHH-hhCCCCCCCcEEEEEccCCcCc--ccc-----
Q 044572 299 GASVTDLYAGAGVIGLSLAAA---RKCRSVKCVEINKESQLSFEKTV-SRLPKSVDGNISWHNADNSIEP--LSW----- 367 (457)
Q Consensus 299 ~~~vLDl~cG~G~~sl~lA~~---~~~~~V~gVE~~~~av~~A~~Na-~~~~~~~~~nv~~~~~d~~~~~--~~~----- 367 (457)
++++| +-.|+|.+|..+++. .| .+|++++.+++.++...+.+ +. ...++.++.+|+.+.. ...
T Consensus 2 ~k~vl-ItGasggiG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~ 75 (250)
T 2cfc_A 2 SRVAI-VTGASSGNGLAIATRFLARG-DRVAALDLSAETLEETARTHWHA----YADKVLRVRADVADEGDVNAAIAATM 75 (250)
T ss_dssp CCEEE-EETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHSTT----TGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEE-EeCCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHHh----cCCcEEEEEecCCCHHHHHHHHHHHH
Confidence 34555 445677887777653 33 48999999988777665554 22 1246899999987631 111
Q ss_pred --cCCccEEEECC
Q 044572 368 --LVGSDVLVVDP 378 (457)
Q Consensus 368 --~~~~D~vi~DP 378 (457)
.+..|+||.+-
T Consensus 76 ~~~~~id~li~~A 88 (250)
T 2cfc_A 76 EQFGAIDVLVNNA 88 (250)
T ss_dssp HHHSCCCEEEECC
T ss_pred HHhCCCCEEEECC
Confidence 13689998865
No 372
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=66.40 E-value=18 Score=32.43 Aligned_cols=96 Identities=14% Similarity=0.050 Sum_probs=58.8
Q ss_pred CCeEEEEcccccHHHHHHHhh---CC-CCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcC--cccccCCcc
Q 044572 299 GASVTDLYAGAGVIGLSLAAA---RK-CRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIE--PLSWLVGSD 372 (457)
Q Consensus 299 ~~~vLDl~cG~G~~sl~lA~~---~~-~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~--~~~~~~~~D 372 (457)
+++|| +-.|+|.+|..+++. .+ ..+|++++.++...+.. ..+++++.+|+.+. +......+|
T Consensus 4 ~~~il-VtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-----------~~~~~~~~~D~~d~~~~~~~~~~~d 71 (253)
T 1xq6_A 4 LPTVL-VTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-----------GGEADVFIGDITDADSINPAFQGID 71 (253)
T ss_dssp CCEEE-EESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-----------TCCTTEEECCTTSHHHHHHHHTTCS
T ss_pred CCEEE-EEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-----------CCCeeEEEecCCCHHHHHHHHcCCC
Confidence 45555 566789988887753 21 24899999997654321 12457888998763 222235689
Q ss_pred EEEECCCCCC-----------------c-------------cHHHHHHHHhcCCCCcEEEEeccC
Q 044572 373 VLVVDPPRKG-----------------L-------------DSSLVHALQSIGSAERKAKSLSES 407 (457)
Q Consensus 373 ~vi~DPPR~G-----------------l-------------~~~v~~~l~~~~~~~~ivyvs~~~ 407 (457)
+||..-.... . ...+++++.+.. .+++||+|+..
T Consensus 72 ~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~ 135 (253)
T 1xq6_A 72 ALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG-VKHIVVVGSMG 135 (253)
T ss_dssp EEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT-CSEEEEEEETT
T ss_pred EEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcC-CCEEEEEcCcc
Confidence 8887532110 0 123556665554 68999998644
No 373
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=66.37 E-value=61 Score=29.10 Aligned_cols=75 Identities=16% Similarity=0.140 Sum_probs=48.8
Q ss_pred CCeEEEEcccccHHHHHHHhh---CCCCEEEEEeC-CHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCc--ccc-----
Q 044572 299 GASVTDLYAGAGVIGLSLAAA---RKCRSVKCVEI-NKESQLSFEKTVSRLPKSVDGNISWHNADNSIEP--LSW----- 367 (457)
Q Consensus 299 ~~~vLDl~cG~G~~sl~lA~~---~~~~~V~gVE~-~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~--~~~----- 367 (457)
++++| +-.|+|.+|..+++. .| .+|+.++. +++.++.+.+.++.. ..++.++.+|+.+.. ...
T Consensus 4 ~k~vl-VTGas~giG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~ 77 (246)
T 2uvd_A 4 GKVAL-VTGASRGIGRAIAIDLAKQG-ANVVVNYAGNEQKANEVVDEIKKL----GSDAIAVRADVANAEDVTNMVKQTV 77 (246)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEE-EECCCcHHHHHHHHHHHHCC-CEEEEEeCCCHHHHHHHHHHHHhc----CCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 45566 556778888777653 23 48999998 887777666555542 146889999987631 111
Q ss_pred --cCCccEEEECCC
Q 044572 368 --LVGSDVLVVDPP 379 (457)
Q Consensus 368 --~~~~D~vi~DPP 379 (457)
.+..|++|.+--
T Consensus 78 ~~~g~id~lv~nAg 91 (246)
T 2uvd_A 78 DVFGQVDILVNNAG 91 (246)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 146899988653
No 374
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=66.32 E-value=31 Score=30.95 Aligned_cols=94 Identities=15% Similarity=0.140 Sum_probs=60.4
Q ss_pred CeEEEEcccccHHHHHHHhh---CCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcC--cccccCCccEE
Q 044572 300 ASVTDLYAGAGVIGLSLAAA---RKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIE--PLSWLVGSDVL 374 (457)
Q Consensus 300 ~~vLDl~cG~G~~sl~lA~~---~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~--~~~~~~~~D~v 374 (457)
++|| +-.|+|.+|..+++. .|..+|++++.+++.++ . ....+++++.+|+.+. +.......|+|
T Consensus 24 k~vl-VtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~-------~---~~~~~~~~~~~Dl~d~~~~~~~~~~~D~v 92 (236)
T 3qvo_A 24 KNVL-ILGAGGQIARHVINQLADKQTIKQTLFARQPAKIH-------K---PYPTNSQIIMGDVLNHAALKQAMQGQDIV 92 (236)
T ss_dssp EEEE-EETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSC-------S---SCCTTEEEEECCTTCHHHHHHHHTTCSEE
T ss_pred cEEE-EEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhc-------c---cccCCcEEEEecCCCHHHHHHHhcCCCEE
Confidence 3455 667788888887764 22148999999875421 1 1124789999999763 22233578999
Q ss_pred EECCCCCCcc---HHHHHHHHhcCCCCcEEEEec
Q 044572 375 VVDPPRKGLD---SSLVHALQSIGSAERKAKSLS 405 (457)
Q Consensus 375 i~DPPR~Gl~---~~v~~~l~~~~~~~~ivyvs~ 405 (457)
|.+-...... ..+++.+.+.. .+++|++|+
T Consensus 93 v~~a~~~~~~~~~~~~~~~~~~~~-~~~iV~iSS 125 (236)
T 3qvo_A 93 YANLTGEDLDIQANSVIAAMKACD-VKRLIFVLS 125 (236)
T ss_dssp EEECCSTTHHHHHHHHHHHHHHTT-CCEEEEECC
T ss_pred EEcCCCCchhHHHHHHHHHHHHcC-CCEEEEEec
Confidence 9766543332 23556665654 789999985
No 375
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=65.99 E-value=9.4 Score=37.26 Aligned_cols=94 Identities=17% Similarity=0.081 Sum_probs=56.5
Q ss_pred CCCCeEEEEcccc-cHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCc---cccc--CC
Q 044572 297 PYGASVTDLYAGA-GVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEP---LSWL--VG 370 (457)
Q Consensus 297 ~~~~~vLDl~cG~-G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~---~~~~--~~ 370 (457)
.+|++||=.|+|. |.+++.+|+..|+ +|++++.+++-++.+++ ++ .+ ..+..+..++. .... ..
T Consensus 188 ~~g~~VlV~G~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~----lG---a~--~vi~~~~~~~~~~v~~~~~g~g 257 (363)
T 3uog_A 188 RAGDRVVVQGTGGVALFGLQIAKATGA-EVIVTSSSREKLDRAFA----LG---AD--HGINRLEEDWVERVYALTGDRG 257 (363)
T ss_dssp CTTCEEEEESSBHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHH----HT---CS--EEEETTTSCHHHHHHHHHTTCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEecCchhHHHHHH----cC---CC--EEEcCCcccHHHHHHHHhCCCC
Confidence 4789999888653 6777777877776 89999999998887754 11 12 22332212211 1111 26
Q ss_pred ccEEEECCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 371 SDVLVVDPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 371 ~D~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
+|+||---. ...+...+..+++.++++.+.
T Consensus 258 ~D~vid~~g----~~~~~~~~~~l~~~G~iv~~G 287 (363)
T 3uog_A 258 ADHILEIAG----GAGLGQSLKAVAPDGRISVIG 287 (363)
T ss_dssp EEEEEEETT----SSCHHHHHHHEEEEEEEEEEC
T ss_pred ceEEEECCC----hHHHHHHHHHhhcCCEEEEEe
Confidence 888775332 122445555666567777764
No 376
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=65.54 E-value=14 Score=33.05 Aligned_cols=88 Identities=17% Similarity=0.170 Sum_probs=51.5
Q ss_pred cccccHHHHHHHhhC--CCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcC--cccc-cCCccEEEECCCC
Q 044572 306 YAGAGVIGLSLAAAR--KCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIE--PLSW-LVGSDVLVVDPPR 380 (457)
Q Consensus 306 ~cG~G~~sl~lA~~~--~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~--~~~~-~~~~D~vi~DPPR 380 (457)
-||.|.+|..+|+.. ....|+.+|.+++.++...+.. .+.++.+|+.+. +... ....|+||+--|.
T Consensus 5 IiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~---------~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~ 75 (218)
T 3l4b_C 5 IIGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL---------KATIIHGDGSHKEILRDAEVSKNDVVVILTPR 75 (218)
T ss_dssp EECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS---------SSEEEESCTTSHHHHHHHTCCTTCEEEECCSC
T ss_pred EECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc---------CCeEEEcCCCCHHHHHhcCcccCCEEEEecCC
Confidence 367788888887631 1248999999999887654321 247889998763 1111 3578988876553
Q ss_pred CCccHHHHHHHHhcCCCCcEEE
Q 044572 381 KGLDSSLVHALQSIGSAERKAK 402 (457)
Q Consensus 381 ~Gl~~~v~~~l~~~~~~~~ivy 402 (457)
.-....+....+...+..+++.
T Consensus 76 d~~n~~~~~~a~~~~~~~~iia 97 (218)
T 3l4b_C 76 DEVNLFIAQLVMKDFGVKRVVS 97 (218)
T ss_dssp HHHHHHHHHHHHHTSCCCEEEE
T ss_pred cHHHHHHHHHHHHHcCCCeEEE
Confidence 2222223333444333444443
No 377
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=65.35 E-value=17 Score=34.83 Aligned_cols=96 Identities=17% Similarity=0.142 Sum_probs=57.1
Q ss_pred CCCCeEEEEccc-ccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcC---cccc--cCC
Q 044572 297 PYGASVTDLYAG-AGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIE---PLSW--LVG 370 (457)
Q Consensus 297 ~~~~~vLDl~cG-~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~---~~~~--~~~ 370 (457)
.+|++||=.|+| .|.+++.+|+..|+..|+++|.+++-++.|++ ++ .+ ..+..+-.+. .... ...
T Consensus 159 ~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~----lG---a~--~~i~~~~~~~~~~~~~~~~~~g 229 (346)
T 4a2c_A 159 CENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKS----FG---AM--QTFNSSEMSAPQMQSVLRELRF 229 (346)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TT---CS--EEEETTTSCHHHHHHHHGGGCS
T ss_pred CCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHH----cC---Ce--EEEeCCCCCHHHHHHhhcccCC
Confidence 478898888774 46677788888888899999999998887764 22 12 2232221111 1111 134
Q ss_pred ccEEEECCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 371 SDVLVVDPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 371 ~D~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
+|+|+- - .|....+-..+..+++.++++.+.
T Consensus 230 ~d~v~d-~--~G~~~~~~~~~~~l~~~G~~v~~g 260 (346)
T 4a2c_A 230 NQLILE-T--AGVPQTVELAVEIAGPHAQLALVG 260 (346)
T ss_dssp SEEEEE-C--SCSHHHHHHHHHHCCTTCEEEECC
T ss_pred cccccc-c--ccccchhhhhhheecCCeEEEEEe
Confidence 676654 2 343333445566666566666654
No 378
>1yf3_A DNA adenine methylase; T4DAM, methyltransferase, transferase-DNA complex; HET: DNA SAH; 2.29A {Enterobacteria phage T4} SCOP: c.66.1.28 PDB: 1yfj_A* 1yfl_A* 1q0s_A* 1q0t_A*
Probab=65.34 E-value=3.1 Score=39.11 Aligned_cols=45 Identities=22% Similarity=0.263 Sum_probs=35.5
Q ss_pred HHHHHHHhhCCCCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHH
Q 044572 287 ILLRKLQKYVPYGASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQL 336 (457)
Q Consensus 287 ~l~~~i~~~~~~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~ 336 (457)
.|+..+.+++++..+.+|.|+|+|+..+.+. .. ++.-|++++.+.
T Consensus 13 ~l~~~i~~~lP~~~~yvEpF~GggaV~~~~~----~~-~viNDin~~li~ 57 (259)
T 1yf3_A 13 SLLPELKSHFPKYNRFVDLFCGGLSVSLNVN----GP-VLANDIQEPIIE 57 (259)
T ss_dssp TTHHHHHHTCCCCSEEEETTCTTCTTGGGSC----SS-EEEECSCHHHHH
T ss_pred HHHHHHHHhCcccCeEEEecCCccHHHHhcc----cc-EEEecCChHHHH
Confidence 3466777777767899999999999887543 35 999999998765
No 379
>2dpm_A M.dpnii 1, protein (adenine-specific methyltransferase dpnii 1); DNA adenine methyltransferase, methylase; HET: SAM; 1.80A {Streptococcus pneumoniae} SCOP: c.66.1.28
Probab=64.85 E-value=15 Score=34.79 Aligned_cols=42 Identities=17% Similarity=0.119 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHhhCCCCCCCcEEEE--EccCCcCcccccCCccEEEECCCCCC
Q 044572 332 KESQLSFEKTVSRLPKSVDGNISWH--NADNSIEPLSWLVGSDVLVVDPPRKG 382 (457)
Q Consensus 332 ~~av~~A~~Na~~~~~~~~~nv~~~--~~d~~~~~~~~~~~~D~vi~DPPR~G 382 (457)
++.+..+.+-++ ++++. ++|..+.+... ..-|+|.+|||+.+
T Consensus 156 ~~~l~~~~~~l~--------~v~i~~~~~Df~~~i~~~-~~~~fvY~DPPY~~ 199 (284)
T 2dpm_A 156 EELISAISVYIN--------NNQLEIKVGDFEKAIVDV-RTGDFVYFDPPYIP 199 (284)
T ss_dssp HHHHHHHHHHHH--------HSEEEEEESCGGGGGTTC-CTTCEEEECCCCCC
T ss_pred HHHHHHHHHHhC--------CCEEEEeCCCHHHHHHhc-CCCCEEEeCCCccc
Confidence 445555444443 35777 99998876554 44589999999853
No 380
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=62.86 E-value=10 Score=36.24 Aligned_cols=89 Identities=15% Similarity=0.101 Sum_probs=55.4
Q ss_pred CCCeEEEEcccccHHHHHHHhh---CCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCc--ccccCCcc
Q 044572 298 YGASVTDLYAGAGVIGLSLAAA---RKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEP--LSWLVGSD 372 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~---~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~--~~~~~~~D 372 (457)
.+++|| +-.|+|.+|..+++. .| .+|++++.++.. .+++++.+|+.+.. ......+|
T Consensus 18 ~~~~vl-VtGatG~iG~~l~~~L~~~G-~~V~~~~r~~~~----------------~~~~~~~~Dl~d~~~~~~~~~~~d 79 (347)
T 4id9_A 18 GSHMIL-VTGSAGRVGRAVVAALRTQG-RTVRGFDLRPSG----------------TGGEEVVGSLEDGQALSDAIMGVS 79 (347)
T ss_dssp ---CEE-EETTTSHHHHHHHHHHHHTT-CCEEEEESSCCS----------------SCCSEEESCTTCHHHHHHHHTTCS
T ss_pred CCCEEE-EECCCChHHHHHHHHHHhCC-CEEEEEeCCCCC----------------CCccEEecCcCCHHHHHHHHhCCC
Confidence 356677 566889999888753 23 479999887542 24578899987632 22235789
Q ss_pred EEEECCCCCCc---------------cHHHHHHHHhcCCCCcEEEEec
Q 044572 373 VLVVDPPRKGL---------------DSSLVHALQSIGSAERKAKSLS 405 (457)
Q Consensus 373 ~vi~DPPR~Gl---------------~~~v~~~l~~~~~~~~ivyvs~ 405 (457)
+||.--..... ...+++++.+.. .+++||+||
T Consensus 80 ~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~V~~SS 126 (347)
T 4id9_A 80 AVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAAG-VRRFVFASS 126 (347)
T ss_dssp EEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEE
T ss_pred EEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEECC
Confidence 88864332111 123566666654 789999985
No 381
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=62.38 E-value=12 Score=37.70 Aligned_cols=92 Identities=12% Similarity=0.024 Sum_probs=55.9
Q ss_pred CeEEEEcccccHHHHHHHhhC--CCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcC--cccc-cCCccEE
Q 044572 300 ASVTDLYAGAGVIGLSLAAAR--KCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIE--PLSW-LVGSDVL 374 (457)
Q Consensus 300 ~~vLDl~cG~G~~sl~lA~~~--~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~--~~~~-~~~~D~v 374 (457)
.+|+ =||.|.+|..+++.. ....|++||.+++.++.++. . .+.++.||+.+. +... ....|+|
T Consensus 5 ~~vi--IiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~---~-------g~~vi~GDat~~~~L~~agi~~A~~v 72 (413)
T 3l9w_A 5 MRVI--IAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK---F-------GMKVFYGDATRMDLLESAGAAKAEVL 72 (413)
T ss_dssp CSEE--EECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH---T-------TCCCEESCTTCHHHHHHTTTTTCSEE
T ss_pred CeEE--EECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh---C-------CCeEEEcCCCCHHHHHhcCCCccCEE
Confidence 3454 356688888777531 12479999999999987763 1 135788998763 2221 3568888
Q ss_pred EECCCCCCccHHHHHHHHhcCCCCcEEEE
Q 044572 375 VVDPPRKGLDSSLVHALQSIGSAERKAKS 403 (457)
Q Consensus 375 i~DPPR~Gl~~~v~~~l~~~~~~~~ivyv 403 (457)
|+--+.......++..++.+.+.-.|+.-
T Consensus 73 iv~~~~~~~n~~i~~~ar~~~p~~~Iiar 101 (413)
T 3l9w_A 73 INAIDDPQTNLQLTEMVKEHFPHLQIIAR 101 (413)
T ss_dssp EECCSSHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred EECCCChHHHHHHHHHHHHhCCCCeEEEE
Confidence 87665433333456666666533244443
No 382
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=62.28 E-value=27 Score=33.33 Aligned_cols=103 Identities=14% Similarity=0.027 Sum_probs=60.6
Q ss_pred CCCeEEEEcccccHHHHHHHhh---CCCCEEEEEeCCH----HHHHHHHHHHhhCCCCCCCcEEEEEccCCcC--ccccc
Q 044572 298 YGASVTDLYAGAGVIGLSLAAA---RKCRSVKCVEINK----ESQLSFEKTVSRLPKSVDGNISWHNADNSIE--PLSWL 368 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~---~~~~~V~gVE~~~----~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~--~~~~~ 368 (457)
.+.+|| +-.|+|.+|..+++. .| .+|++++.++ +.++..+..+... ...+++++.+|+.+. +....
T Consensus 26 ~~~~vl-VtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~ 100 (352)
T 1sb8_A 26 QPKVWL-ITGVAGFIGSNLLETLLKLD-QKVVGLDNFATGHQRNLDEVRSLVSEK---QWSNFKFIQGDIRNLDDCNNAC 100 (352)
T ss_dssp SCCEEE-EETTTSHHHHHHHHHHHHTT-CEEEEEECCSSCCHHHHHHHHHHSCHH---HHTTEEEEECCTTSHHHHHHHH
T ss_pred cCCeEE-EECCCcHHHHHHHHHHHHCC-CEEEEEeCCCccchhhHHHHhhhcccc---cCCceEEEECCCCCHHHHHHHh
Confidence 356777 566789998887753 23 4899999864 2333332221100 013689999998763 12223
Q ss_pred CCccEEEECCCCCCcc-----------------HHHHHHHHhcCCCCcEEEEecc
Q 044572 369 VGSDVLVVDPPRKGLD-----------------SSLVHALQSIGSAERKAKSLSE 406 (457)
Q Consensus 369 ~~~D~vi~DPPR~Gl~-----------------~~v~~~l~~~~~~~~ivyvs~~ 406 (457)
..+|+||..-...+.. ..+++++.+.. .+++||+||.
T Consensus 101 ~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS~ 154 (352)
T 1sb8_A 101 AGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAK-VQSFTYAASS 154 (352)
T ss_dssp TTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEG
T ss_pred cCCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeccH
Confidence 5789998764432210 12445555553 6899999864
No 383
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=62.16 E-value=73 Score=28.46 Aligned_cols=73 Identities=14% Similarity=0.121 Sum_probs=47.3
Q ss_pred CCCeEEEEcccccHHHHHHHhh---CCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcE-EEEEccCCcCc--ccc----
Q 044572 298 YGASVTDLYAGAGVIGLSLAAA---RKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNI-SWHNADNSIEP--LSW---- 367 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~---~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv-~~~~~d~~~~~--~~~---- 367 (457)
.++++| +-.|+|.+|..+++. .| .+|++++.+++.++.+.+.+. .++ .++.+|+.+.. ...
T Consensus 10 ~~k~vl-ITGasggiG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~ 80 (254)
T 2wsb_A 10 DGACAA-VTGAGSGIGLEICRAFAASG-ARLILIDREAAALDRAAQELG-------AAVAARIVADVTDAEAMTAAAAEA 80 (254)
T ss_dssp TTCEEE-EETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHG-------GGEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEE-EECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHhc-------ccceeEEEEecCCHHHHHHHHHHH
Confidence 356677 555677888777653 23 479999999887765554431 245 88899987631 111
Q ss_pred --cCCccEEEECCC
Q 044572 368 --LVGSDVLVVDPP 379 (457)
Q Consensus 368 --~~~~D~vi~DPP 379 (457)
....|++|.+--
T Consensus 81 ~~~~~id~li~~Ag 94 (254)
T 2wsb_A 81 EAVAPVSILVNSAG 94 (254)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HhhCCCcEEEECCc
Confidence 146899988653
No 384
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=62.11 E-value=14 Score=32.59 Aligned_cols=63 Identities=14% Similarity=0.088 Sum_probs=43.1
Q ss_pred EcccccHHHHHHHhh---CCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEECC
Q 044572 305 LYAGAGVIGLSLAAA---RKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVVDP 378 (457)
Q Consensus 305 l~cG~G~~sl~lA~~---~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~DP 378 (457)
+-.|+|.+|..+++. .| .+|++++.+++.+... . ..+++++.+|+.+........+|+||..-
T Consensus 5 VtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~----~------~~~~~~~~~D~~d~~~~~~~~~d~vi~~a 70 (224)
T 3h2s_A 5 VLGATGRAGSAIVAEARRRG-HEVLAVVRDPQKAADR----L------GATVATLVKEPLVLTEADLDSVDAVVDAL 70 (224)
T ss_dssp EETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHH----T------CTTSEEEECCGGGCCHHHHTTCSEEEECC
T ss_pred EEcCCCHHHHHHHHHHHHCC-CEEEEEEecccccccc----c------CCCceEEecccccccHhhcccCCEEEECC
Confidence 456788888877753 23 4899999998765421 1 13678999999875433346789888754
No 385
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=61.96 E-value=8.5 Score=37.26 Aligned_cols=95 Identities=23% Similarity=0.148 Sum_probs=55.8
Q ss_pred CCCeEEEEccc-ccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcC---ccccc--CCc
Q 044572 298 YGASVTDLYAG-AGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIE---PLSWL--VGS 371 (457)
Q Consensus 298 ~~~~vLDl~cG-~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~---~~~~~--~~~ 371 (457)
+|++||-.|+| .|.+++.+|+..|+++|++++.+++.++.+++- + .+ ..+..+..++ +.+.. ..+
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~----G---a~--~~~~~~~~~~~~~v~~~~~g~g~ 237 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKV----G---AD--YVINPFEEDVVKEVMDITDGNGV 237 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHH----T---CS--EEECTTTSCHHHHHHHHTTTSCE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh----C---CC--EEECCCCcCHHHHHHHHcCCCCC
Confidence 68889988874 466777777777776899999999888877631 1 11 1222211111 11111 258
Q ss_pred cEEEECCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 372 DVLVVDPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 372 D~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
|+||--- |....+...+..+++.++++.+.
T Consensus 238 D~vid~~---g~~~~~~~~~~~l~~~G~iv~~g 267 (348)
T 2d8a_A 238 DVFLEFS---GAPKALEQGLQAVTPAGRVSLLG 267 (348)
T ss_dssp EEEEECS---CCHHHHHHHHHHEEEEEEEEECC
T ss_pred CEEEECC---CCHHHHHHHHHHHhcCCEEEEEc
Confidence 9887532 22233444555565556666664
No 386
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=61.81 E-value=13 Score=35.81 Aligned_cols=96 Identities=19% Similarity=0.043 Sum_probs=57.2
Q ss_pred CCCCCeEEEEccc-ccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcC---cccccCCc
Q 044572 296 VPYGASVTDLYAG-AGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIE---PLSWLVGS 371 (457)
Q Consensus 296 ~~~~~~vLDl~cG-~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~---~~~~~~~~ 371 (457)
+.+|++||-.|+| .|.+++.+|+..|+ +|++++.+++-++.+++ ++ .+ ..+..+-.+. +.+....+
T Consensus 162 ~~~g~~VlV~GaG~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~----lG---a~--~~~d~~~~~~~~~~~~~~~~~ 231 (339)
T 1rjw_A 162 AKPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKE----LG---AD--LVVNPLKEDAAKFMKEKVGGV 231 (339)
T ss_dssp CCTTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHH----TT---CS--EEECTTTSCHHHHHHHHHSSE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH----CC---CC--EEecCCCccHHHHHHHHhCCC
Confidence 4578999988874 57777788877776 89999999998887753 22 12 1221111111 11111468
Q ss_pred cEEEECCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 372 DVLVVDPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 372 D~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
|+||-.- |....+...+..+++.++++.+.
T Consensus 232 d~vid~~---g~~~~~~~~~~~l~~~G~~v~~g 261 (339)
T 1rjw_A 232 HAAVVTA---VSKPAFQSAYNSIRRGGACVLVG 261 (339)
T ss_dssp EEEEESS---CCHHHHHHHHHHEEEEEEEEECC
T ss_pred CEEEECC---CCHHHHHHHHHHhhcCCEEEEec
Confidence 9887532 33233445555566556676664
No 387
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=61.78 E-value=12 Score=36.10 Aligned_cols=94 Identities=14% Similarity=0.018 Sum_probs=56.8
Q ss_pred CCCCeEEEEcc--cccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcC---ccccc--C
Q 044572 297 PYGASVTDLYA--GAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIE---PLSWL--V 369 (457)
Q Consensus 297 ~~~~~vLDl~c--G~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~---~~~~~--~ 369 (457)
.++++||-.|+ |.|...+.+|+..|+ +|++++.+++.++.+++ . + .+ ..+..+-.+. +.+.. .
T Consensus 165 ~~g~~vlV~Gasg~iG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~---~-g---a~--~~~d~~~~~~~~~~~~~~~~~ 234 (343)
T 2eih_A 165 RPGDDVLVMAAGSGVSVAAIQIAKLFGA-RVIATAGSEDKLRRAKA---L-G---AD--ETVNYTHPDWPKEVRRLTGGK 234 (343)
T ss_dssp CTTCEEEECSTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH---H-T---CS--EEEETTSTTHHHHHHHHTTTT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHh---c-C---CC--EEEcCCcccHHHHHHHHhCCC
Confidence 46899999987 678888888877775 89999999998887763 1 1 12 1222211111 11111 3
Q ss_pred CccEEEECCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 370 GSDVLVVDPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 370 ~~D~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
.+|+||-.-. ...+...+..+++.++++.++
T Consensus 235 ~~d~vi~~~g----~~~~~~~~~~l~~~G~~v~~g 265 (343)
T 2eih_A 235 GADKVVDHTG----ALYFEGVIKATANGGRIAIAG 265 (343)
T ss_dssp CEEEEEESSC----SSSHHHHHHHEEEEEEEEESS
T ss_pred CceEEEECCC----HHHHHHHHHhhccCCEEEEEe
Confidence 6898876443 122444455555556666664
No 388
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=61.05 E-value=25 Score=32.42 Aligned_cols=72 Identities=14% Similarity=0.003 Sum_probs=46.9
Q ss_pred CCeEEEEcccccHHHHHHHhh---CCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcc--cc------
Q 044572 299 GASVTDLYAGAGVIGLSLAAA---RKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPL--SW------ 367 (457)
Q Consensus 299 ~~~vLDl~cG~G~~sl~lA~~---~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~--~~------ 367 (457)
++++| +-.|+|.+|..+++. .| .+|++++.+.+.++..... . ..++.++.+|+.+... ..
T Consensus 5 ~k~vl-VTGas~gIG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~---~----~~~~~~~~~Dv~~~~~~~~~~~~~~~ 75 (281)
T 3m1a_A 5 AKVWL-VTGASSGFGRAIAEAAVAAG-DTVIGTARRTEALDDLVAA---Y----PDRAEAISLDVTDGERIDVVAADVLA 75 (281)
T ss_dssp CCEEE-ETTTTSHHHHHHHHHHHHTT-CEEEEEESSGGGGHHHHHH---C----TTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CcEEE-EECCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHh---c----cCCceEEEeeCCCHHHHHHHHHHHHH
Confidence 45555 666778888777653 23 4899999998876654432 1 1468999999876311 11
Q ss_pred -cCCccEEEECCC
Q 044572 368 -LVGSDVLVVDPP 379 (457)
Q Consensus 368 -~~~~D~vi~DPP 379 (457)
.+..|++|.+--
T Consensus 76 ~~g~id~lv~~Ag 88 (281)
T 3m1a_A 76 RYGRVDVLVNNAG 88 (281)
T ss_dssp HHSCCSEEEECCC
T ss_pred hCCCCCEEEECCC
Confidence 136899887643
No 389
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=60.28 E-value=12 Score=35.78 Aligned_cols=94 Identities=16% Similarity=0.018 Sum_probs=54.6
Q ss_pred CCCCeEEEEcc--cccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEc-cCCcC---cccc-cC
Q 044572 297 PYGASVTDLYA--GAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNA-DNSIE---PLSW-LV 369 (457)
Q Consensus 297 ~~~~~vLDl~c--G~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~-d~~~~---~~~~-~~ 369 (457)
.+|++||-.|+ |.|.....+++..|+ +|+++|.+++.++.+++ ++ .+ ..+.. +..+. +... .+
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~~----~g---~~--~~~d~~~~~~~~~~~~~~~~~ 213 (333)
T 1v3u_A 144 KGGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAYLKQ----IG---FD--AAFNYKTVNSLEEALKKASPD 213 (333)
T ss_dssp CSSCEEEEESTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH----TT---CS--EEEETTSCSCHHHHHHHHCTT
T ss_pred CCCCEEEEecCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHh----cC---Cc--EEEecCCHHHHHHHHHHHhCC
Confidence 47899999986 677777777766665 89999999988877632 21 11 11211 10111 1111 13
Q ss_pred CccEEEECCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 370 GSDVLVVDPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 370 ~~D~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
.+|++|-.- |. ..+...+..+++.++++.+.
T Consensus 214 ~~d~vi~~~---g~-~~~~~~~~~l~~~G~~v~~g 244 (333)
T 1v3u_A 214 GYDCYFDNV---GG-EFLNTVLSQMKDFGKIAICG 244 (333)
T ss_dssp CEEEEEESS---CH-HHHHHHHTTEEEEEEEEECC
T ss_pred CCeEEEECC---Ch-HHHHHHHHHHhcCCEEEEEe
Confidence 689887643 32 23444455555556676664
No 390
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=59.73 E-value=59 Score=28.76 Aligned_cols=71 Identities=13% Similarity=0.018 Sum_probs=46.0
Q ss_pred CCeEEEEcccccHHHHHHHhh---CCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCc--ccc------
Q 044572 299 GASVTDLYAGAGVIGLSLAAA---RKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEP--LSW------ 367 (457)
Q Consensus 299 ~~~vLDl~cG~G~~sl~lA~~---~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~--~~~------ 367 (457)
++++| +-.|+|.+|..+++. .| .+|++++.+++.++...... .++.++.+|+.+.. ...
T Consensus 5 ~k~vl-VtGasggiG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~--------~~~~~~~~D~~~~~~~~~~~~~~~~ 74 (234)
T 2ehd_A 5 KGAVL-ITGASRGIGEATARLLHAKG-YRVGLMARDEKRLQALAAEL--------EGALPLPGDVREEGDWARAVAAMEE 74 (234)
T ss_dssp CCEEE-ESSTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHS--------TTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEE-EECCCcHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHh--------hhceEEEecCCCHHHHHHHHHHHHH
Confidence 34555 667788888877753 23 48999999988765544321 15688899987631 111
Q ss_pred -cCCccEEEECCC
Q 044572 368 -LVGSDVLVVDPP 379 (457)
Q Consensus 368 -~~~~D~vi~DPP 379 (457)
.+..|++|.+.-
T Consensus 75 ~~~~id~li~~Ag 87 (234)
T 2ehd_A 75 AFGELSALVNNAG 87 (234)
T ss_dssp HHSCCCEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 146899988753
No 391
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=59.56 E-value=71 Score=29.07 Aligned_cols=72 Identities=19% Similarity=0.173 Sum_probs=45.8
Q ss_pred CCeEEEEcccccHHHHHHHhh---CCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCc--ccc------
Q 044572 299 GASVTDLYAGAGVIGLSLAAA---RKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEP--LSW------ 367 (457)
Q Consensus 299 ~~~vLDl~cG~G~~sl~lA~~---~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~--~~~------ 367 (457)
++++| +-.|+|.+|..+++. .| .+|+.++.+++..+.+.+.+. .++.++.+|+.+.. ...
T Consensus 7 ~k~vl-VTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~-------~~~~~~~~D~~~~~~v~~~~~~~~~ 77 (260)
T 1nff_A 7 GKVAL-VSGGARGMGASHVRAMVAEG-AKVVFGDILDEEGKAMAAELA-------DAARYVHLDVTQPAQWKAAVDTAVT 77 (260)
T ss_dssp TCEEE-EETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHTG-------GGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEE-EeCCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHhh-------cCceEEEecCCCHHHHHHHHHHHHH
Confidence 56666 445667777766642 33 489999999887665544332 24788999987531 111
Q ss_pred -cCCccEEEECCC
Q 044572 368 -LVGSDVLVVDPP 379 (457)
Q Consensus 368 -~~~~D~vi~DPP 379 (457)
.+..|++|.+--
T Consensus 78 ~~g~iD~lv~~Ag 90 (260)
T 1nff_A 78 AFGGLHVLVNNAG 90 (260)
T ss_dssp HHSCCCEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 136899988753
No 392
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=59.38 E-value=39 Score=30.82 Aligned_cols=77 Identities=17% Similarity=0.078 Sum_probs=49.1
Q ss_pred CCCeEEEEcc-cccH---HHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcc--cc----
Q 044572 298 YGASVTDLYA-GAGV---IGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPL--SW---- 367 (457)
Q Consensus 298 ~~~~vLDl~c-G~G~---~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~--~~---- 367 (457)
.++++|=.|+ |.|. ++..|++. | .+|+.++.+.+.++.+.+.++.. ...++.++.+|+.+... .+
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~-G-~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~ 95 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLE-G-ADVVISDYHERRLGETRDQLADL---GLGRVEAVVCDVTSTEAVDALITQT 95 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHHTT---CSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHC-C-CEEEEecCCHHHHHHHHHHHHhc---CCCceEEEEeCCCCHHHHHHHHHHH
Confidence 3667775544 3331 34444443 3 47999999999888777766542 23579999999976311 11
Q ss_pred ---cCCccEEEECCC
Q 044572 368 ---LVGSDVLVVDPP 379 (457)
Q Consensus 368 ---~~~~D~vi~DPP 379 (457)
.++.|++|.+.-
T Consensus 96 ~~~~g~id~li~~Ag 110 (266)
T 3o38_A 96 VEKAGRLDVLVNNAG 110 (266)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHhCCCcEEEECCC
Confidence 146899988764
No 393
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=59.13 E-value=55 Score=32.23 Aligned_cols=106 Identities=13% Similarity=0.059 Sum_probs=60.8
Q ss_pred CCeEEEEcccccHHHHHHHhhC--CCCEEEEEeCCHH---HHHHHHHHHhhCCC-----CCCCcEEEEEccCCcCc-ccc
Q 044572 299 GASVTDLYAGAGVIGLSLAAAR--KCRSVKCVEINKE---SQLSFEKTVSRLPK-----SVDGNISWHNADNSIEP-LSW 367 (457)
Q Consensus 299 ~~~vLDl~cG~G~~sl~lA~~~--~~~~V~gVE~~~~---av~~A~~Na~~~~~-----~~~~nv~~~~~d~~~~~-~~~ 367 (457)
+++|| +-.|+|.+|..+++.. ...+|++++.++. +.+...++++.... ....++.++.+|+.+.. ...
T Consensus 69 ~~~vl-VTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~ 147 (427)
T 4f6c_A 69 LGNTL-LTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVVL 147 (427)
T ss_dssp CEEEE-EECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCCC
T ss_pred CCEEE-EecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCCC
Confidence 34566 6677899998888642 1247999998876 55444444322100 01247899999987621 112
Q ss_pred cCCccEEEECCCCC--------Ccc------HHHHHHHHhcCCCCcEEEEeccC
Q 044572 368 LVGSDVLVVDPPRK--------GLD------SSLVHALQSIGSAERKAKSLSES 407 (457)
Q Consensus 368 ~~~~D~vi~DPPR~--------Gl~------~~v~~~l~~~~~~~~ivyvs~~~ 407 (457)
...+|+||..--.. ... ..+++++.. ..+++||+|+.+
T Consensus 148 ~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~--~~~~~v~~SS~~ 199 (427)
T 4f6c_A 148 PENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ--HHARLIYVSTIS 199 (427)
T ss_dssp SSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHH--TTCEEEEEEEGG
T ss_pred cCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHh--cCCcEEEECchH
Confidence 35789888643211 111 134555555 378999998544
No 394
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=59.02 E-value=40 Score=32.63 Aligned_cols=63 Identities=17% Similarity=0.101 Sum_probs=42.1
Q ss_pred CCCeEEEEcccccHHHHHHHhhCCCCEEEEEeCC-HHHHHHHHHHHhhCCC-----C-------------CCCcEEEEEc
Q 044572 298 YGASVTDLYAGAGVIGLSLAAARKCRSVKCVEIN-KESQLSFEKTVSRLPK-----S-------------VDGNISWHNA 358 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~-~~av~~A~~Na~~~~~-----~-------------~~~nv~~~~~ 358 (457)
+...|+.||||..+....+....+ .+.-+|++ |+.++.-++-+...+. + ..++.+++.+
T Consensus 97 ~~~qVV~LGaGlDTr~~RL~~~~~--~~~~~EvD~P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~ 174 (334)
T 1rjd_A 97 EKVQVVNLGCGSDLRMLPLLQMFP--HLAYVDIDYNESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAAC 174 (334)
T ss_dssp SSEEEEEETCTTCCTHHHHHHHCT--TEEEEEEECHHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEEC
T ss_pred CCcEEEEeCCCCccHHHHhcCcCC--CCEEEECCCHHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEec
Confidence 456899999999999999986423 34555555 7766655554443200 0 0257899999
Q ss_pred cCCc
Q 044572 359 DNSI 362 (457)
Q Consensus 359 d~~~ 362 (457)
|+.+
T Consensus 175 DL~d 178 (334)
T 1rjd_A 175 DLND 178 (334)
T ss_dssp CTTC
T ss_pred CCCC
Confidence 9986
No 395
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=58.92 E-value=8.5 Score=33.73 Aligned_cols=94 Identities=15% Similarity=0.092 Sum_probs=53.2
Q ss_pred CCCCeEEEEcc--cccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcC---ccccc--C
Q 044572 297 PYGASVTDLYA--GAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIE---PLSWL--V 369 (457)
Q Consensus 297 ~~~~~vLDl~c--G~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~---~~~~~--~ 369 (457)
.+|++||..|+ |.|.....+++..|+ +|+++|.+++..+.+++ .+ .+ ..+..+-.+. +.+.. .
T Consensus 37 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~~----~g---~~--~~~d~~~~~~~~~~~~~~~~~ 106 (198)
T 1pqw_A 37 SPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLSR----LG---VE--YVGDSRSVDFADEILELTDGY 106 (198)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHT----TC---CS--EEEETTCSTHHHHHHHHTTTC
T ss_pred CCCCEEEEeeCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH----cC---CC--EEeeCCcHHHHHHHHHHhCCC
Confidence 47889998873 556655666655554 89999999987766542 21 12 1122111111 11111 3
Q ss_pred CccEEEECCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 370 GSDVLVVDPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 370 ~~D~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
.+|+||-.- | ...+...+..+++.++++.++
T Consensus 107 ~~D~vi~~~---g-~~~~~~~~~~l~~~G~~v~~g 137 (198)
T 1pqw_A 107 GVDVVLNSL---A-GEAIQRGVQILAPGGRFIELG 137 (198)
T ss_dssp CEEEEEECC---C-THHHHHHHHTEEEEEEEEECS
T ss_pred CCeEEEECC---c-hHHHHHHHHHhccCCEEEEEc
Confidence 589888643 3 233455556666567777775
No 396
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=58.33 E-value=11 Score=36.54 Aligned_cols=44 Identities=20% Similarity=0.147 Sum_probs=34.1
Q ss_pred CCCCCeEEEEcc--cccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHH
Q 044572 296 VPYGASVTDLYA--GAGVIGLSLAAARKCRSVKCVEINKESQLSFEK 340 (457)
Q Consensus 296 ~~~~~~vLDl~c--G~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~ 340 (457)
+.+|++||-.|+ |.|...+.+++..|+ +|++++.+++.++.+++
T Consensus 167 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~V~~~~~~~~~~~~~~~ 212 (347)
T 2hcy_A 167 LMAGHWVAISGAAGGLGSLAVQYAKAMGY-RVLGIDGGEGKEELFRS 212 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSTTHHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCC-cEEEEcCCHHHHHHHHH
Confidence 347899999997 577777777776665 89999999887766653
No 397
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=58.10 E-value=1.1e+02 Score=27.76 Aligned_cols=77 Identities=17% Similarity=0.115 Sum_probs=48.6
Q ss_pred CCCeEEEEcccccHHHHHHHhh---CCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCc--ccc-----
Q 044572 298 YGASVTDLYAGAGVIGLSLAAA---RKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEP--LSW----- 367 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~---~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~--~~~----- 367 (457)
.++++|=. .|+|.+|..+|+. .| .+|+.++.+++.++.+.+.++.. ....++.++.+|+.+.. ...
T Consensus 12 ~~k~vlVT-Gas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~v~~~~~~~~ 87 (267)
T 1iy8_A 12 TDRVVLIT-GGGSGLGRATAVRLAAEG-AKLSLVDVSSEGLEASKAAVLET--APDAEVLTTVADVSDEAQVEAYVTATT 87 (267)
T ss_dssp TTCEEEEE-TTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHH--CTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEE-CCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhh--cCCceEEEEEccCCCHHHHHHHHHHHH
Confidence 35667644 4567777666642 23 48999999998877665555431 11246889999987631 111
Q ss_pred --cCCccEEEECC
Q 044572 368 --LVGSDVLVVDP 378 (457)
Q Consensus 368 --~~~~D~vi~DP 378 (457)
.+..|++|.+-
T Consensus 88 ~~~g~id~lv~nA 100 (267)
T 1iy8_A 88 ERFGRIDGFFNNA 100 (267)
T ss_dssp HHHSCCSEEEECC
T ss_pred HHcCCCCEEEECC
Confidence 14689998874
No 398
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=57.99 E-value=7.2 Score=36.93 Aligned_cols=43 Identities=19% Similarity=0.016 Sum_probs=34.8
Q ss_pred CCCCCeEEEEcc--cccHHHHHHHhhCCCCEEEEEeCCHHHHHHHH
Q 044572 296 VPYGASVTDLYA--GAGVIGLSLAAARKCRSVKCVEINKESQLSFE 339 (457)
Q Consensus 296 ~~~~~~vLDl~c--G~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~ 339 (457)
+.+|++||-.|+ |.|..++.+|+..|+ +|++++.+++.++.++
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~ 167 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPL 167 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHH
Confidence 557899998886 667778888877776 8999999988877765
No 399
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=57.98 E-value=9.8 Score=36.76 Aligned_cols=94 Identities=7% Similarity=-0.064 Sum_probs=55.1
Q ss_pred CCCeEEEEccc-ccHHHHHHHhhC--CCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccC-CcCccccc--CCc
Q 044572 298 YGASVTDLYAG-AGVIGLSLAAAR--KCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADN-SIEPLSWL--VGS 371 (457)
Q Consensus 298 ~~~~vLDl~cG-~G~~sl~lA~~~--~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~-~~~~~~~~--~~~ 371 (457)
+|++||-.|+| .|.+++.+|+.. |+ +|+++|.+++-++.+++- + .+ .++..+- .+...... ..+
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga-~Vi~~~~~~~~~~~~~~l----G---a~--~vi~~~~~~~~~~~~~~g~g~ 239 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNI-TIVGISRSKKHRDFALEL----G---AD--YVSEMKDAESLINKLTDGLGA 239 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTC-EEEEECSCHHHHHHHHHH----T---CS--EEECHHHHHHHHHHHHTTCCE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCC-EEEEEeCCHHHHHHHHHh----C---CC--EEeccccchHHHHHhhcCCCc
Confidence 78999998875 367777888766 65 699999999988887641 1 12 2222111 11111111 268
Q ss_pred cEEEECCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 372 DVLVVDPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 372 D~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
|+||-- .|....+...+..+++.++++.+.
T Consensus 240 D~vid~---~g~~~~~~~~~~~l~~~G~iv~~g 269 (344)
T 2h6e_A 240 SIAIDL---VGTEETTYNLGKLLAQEGAIILVG 269 (344)
T ss_dssp EEEEES---SCCHHHHHHHHHHEEEEEEEEECC
T ss_pred cEEEEC---CCChHHHHHHHHHhhcCCEEEEeC
Confidence 888753 232223445555565556666654
No 400
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=57.87 E-value=10 Score=36.39 Aligned_cols=96 Identities=19% Similarity=0.050 Sum_probs=56.1
Q ss_pred CCCCCeEEEEcc--cccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCc---ccc-cC
Q 044572 296 VPYGASVTDLYA--GAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEP---LSW-LV 369 (457)
Q Consensus 296 ~~~~~~vLDl~c--G~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~---~~~-~~ 369 (457)
+.+|++||-.|+ |.|..++.+|+..|+ +|++++.+++-++.+.+. ++ .+ ..+..+-.+.. .+. ..
T Consensus 147 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~---~g---~~--~~~~~~~~~~~~~~~~~~~~ 217 (336)
T 4b7c_A 147 PKNGETVVISGAAGAVGSVAGQIARLKGC-RVVGIAGGAEKCRFLVEE---LG---FD--GAIDYKNEDLAAGLKRECPK 217 (336)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHT---TC---CS--EEEETTTSCHHHHHHHHCTT
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHH---cC---CC--EEEECCCHHHHHHHHHhcCC
Confidence 347899998876 677777788877776 899999999887776322 21 12 22222111211 111 13
Q ss_pred CccEEEECCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 370 GSDVLVVDPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 370 ~~D~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
.+|+||-. .|- ..+...+..+++.++++.+.
T Consensus 218 ~~d~vi~~---~g~-~~~~~~~~~l~~~G~iv~~G 248 (336)
T 4b7c_A 218 GIDVFFDN---VGG-EILDTVLTRIAFKARIVLCG 248 (336)
T ss_dssp CEEEEEES---SCH-HHHHHHHTTEEEEEEEEECC
T ss_pred CceEEEEC---CCc-chHHHHHHHHhhCCEEEEEe
Confidence 58987753 232 33444555555566666664
No 401
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=57.85 E-value=25 Score=31.05 Aligned_cols=94 Identities=15% Similarity=0.139 Sum_probs=58.9
Q ss_pred CeEEEEcccccHHHHHHHhhC--CCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCc--ccccCCccEEE
Q 044572 300 ASVTDLYAGAGVIGLSLAAAR--KCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEP--LSWLVGSDVLV 375 (457)
Q Consensus 300 ~~vLDl~cG~G~~sl~lA~~~--~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~--~~~~~~~D~vi 375 (457)
++|| +-.|+|.+|..+++.. ...+|++++.++... . ....+++++.+|+.+.. ......+|+||
T Consensus 5 ~~il-ItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-------~----~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi 72 (227)
T 3dhn_A 5 KKIV-LIGASGFVGSALLNEALNRGFEVTAVVRHPEKI-------K----IENEHLKVKKADVSSLDEVCEVCKGADAVI 72 (227)
T ss_dssp CEEE-EETCCHHHHHHHHHHHHTTTCEEEEECSCGGGC-------C----CCCTTEEEECCCTTCHHHHHHHHTTCSEEE
T ss_pred CEEE-EEcCCchHHHHHHHHHHHCCCEEEEEEcCcccc-------h----hccCceEEEEecCCCHHHHHHHhcCCCEEE
Confidence 3555 5667888888877531 125899999986532 1 11257899999987632 22335789988
Q ss_pred ECCCCCC-----------ccHHHHHHHHhcCCCCcEEEEecc
Q 044572 376 VDPPRKG-----------LDSSLVHALQSIGSAERKAKSLSE 406 (457)
Q Consensus 376 ~DPPR~G-----------l~~~v~~~l~~~~~~~~ivyvs~~ 406 (457)
..-.... ....+++++.+.. .+++||+|+.
T Consensus 73 ~~a~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~ 113 (227)
T 3dhn_A 73 SAFNPGWNNPDIYDETIKVYLTIIDGVKKAG-VNRFLMVGGA 113 (227)
T ss_dssp ECCCC------CCSHHHHHHHHHHHHHHHTT-CSEEEEECCS
T ss_pred EeCcCCCCChhHHHHHHHHHHHHHHHHHHhC-CCEEEEeCCh
Confidence 7643211 1123566666664 7899999853
No 402
>2qrv_B DNA (cytosine-5)-methyltransferase 3-like; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=57.75 E-value=2.6 Score=39.03 Aligned_cols=71 Identities=14% Similarity=-0.037 Sum_probs=41.3
Q ss_pred CCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccc---cCCccEEE
Q 044572 299 GASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSW---LVGSDVLV 375 (457)
Q Consensus 299 ~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~---~~~~D~vi 375 (457)
.-+++|||||.|. |+ . ..|.. + +.|. .....+.+|+.+..... ...+|+|+
T Consensus 33 ~~~vidLFaGig~-Gl--~-~aGf~-~-------------~~N~--------~~~~~~~~DI~~i~~~~i~~~~~~Dlli 86 (230)
T 2qrv_B 33 PVRVLSLFEDIKK-EL--T-SLGFL-E-------------SGSD--------PGQLKHVVDVTDTVRKDVEEWGPFDLVY 86 (230)
T ss_dssp CCCEEEESSCCTT-TT--T-TTTSC-C--------------------------CCEEEESCCTTCCHHHHHHTCCCSEEE
T ss_pred CceEEEeccChhH-HH--H-HCCCc-h-------------hhcC--------CCCcEecCChhhCCHhHhcccCCCCEEE
Confidence 4579999999886 32 2 23432 1 1221 11246789998764321 14689999
Q ss_pred ECCCCCCcc---------HHHHHHHHhcC
Q 044572 376 VDPPRKGLD---------SSLVHALQSIG 395 (457)
Q Consensus 376 ~DPPR~Gl~---------~~v~~~l~~~~ 395 (457)
--||-.+.+ .+.++.+..++
T Consensus 87 GG~PCQ~FS~ag~rg~Lf~ef~Riv~~~r 115 (230)
T 2qrv_B 87 GATPPLGHTCDRPPSWYLFQFHRLLQYAR 115 (230)
T ss_dssp EECCCTTTSSCSCTHHHHHHHHHHHHHHC
T ss_pred ECCCCCcccccCCCchHHHHHHHHHHHHC
Confidence 999954432 24566666665
No 403
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=57.24 E-value=7.1 Score=37.72 Aligned_cols=94 Identities=10% Similarity=-0.025 Sum_probs=57.4
Q ss_pred CCCCeEEEEccc--ccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcC---ccccc--C
Q 044572 297 PYGASVTDLYAG--AGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIE---PLSWL--V 369 (457)
Q Consensus 297 ~~~~~vLDl~cG--~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~---~~~~~--~ 369 (457)
.+|++||-.|+| .|..++.+|+..|+ +|++++.+++.++.+++. + .+ ..+..+-.+. +.+.. .
T Consensus 143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~l----g---a~--~~~~~~~~~~~~~~~~~~~~~ 212 (340)
T 3gms_A 143 QRNDVLLVNACGSAIGHLFAQLSQILNF-RLIAVTRNNKHTEELLRL----G---AA--YVIDTSTAPLYETVMELTNGI 212 (340)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHH----T---CS--EEEETTTSCHHHHHHHHTTTS
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhC----C---Cc--EEEeCCcccHHHHHHHHhCCC
Confidence 478999988875 77888888887776 899999999888877652 1 11 2222221221 11111 3
Q ss_pred CccEEEECCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 370 GSDVLVVDPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 370 ~~D~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
.+|+||-. .|. ....+.+..+++.++++.+.
T Consensus 213 g~Dvvid~---~g~-~~~~~~~~~l~~~G~iv~~G 243 (340)
T 3gms_A 213 GADAAIDS---IGG-PDGNELAFSLRPNGHFLTIG 243 (340)
T ss_dssp CEEEEEES---SCH-HHHHHHHHTEEEEEEEEECC
T ss_pred CCcEEEEC---CCC-hhHHHHHHHhcCCCEEEEEe
Confidence 68988753 232 23445555566566777664
No 404
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=57.13 E-value=25 Score=32.25 Aligned_cols=92 Identities=15% Similarity=0.146 Sum_probs=56.3
Q ss_pred EcccccHHHHHHHhhCC----CCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcC--cccccCCccEEEECC
Q 044572 305 LYAGAGVIGLSLAAARK----CRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIE--PLSWLVGSDVLVVDP 378 (457)
Q Consensus 305 l~cG~G~~sl~lA~~~~----~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~--~~~~~~~~D~vi~DP 378 (457)
+-.|+|.+|..+++..- ..+|++++.++...+.. .. .+++++.+|+.+. +.......|+||..-
T Consensus 4 VtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~----~~------~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a 73 (286)
T 2zcu_A 4 ITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQAL----AA------QGITVRQADYGDEAALTSALQGVEKLLLIS 73 (286)
T ss_dssp EESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHH----HH------TTCEEEECCTTCHHHHHHHTTTCSEEEECC
T ss_pred EEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhh----hc------CCCeEEEcCCCCHHHHHHHHhCCCEEEEeC
Confidence 34578999988875321 23699999886543221 11 2468899998763 222345689888643
Q ss_pred CC-----CCccHHHHHHHHhcCCCCcEEEEeccC
Q 044572 379 PR-----KGLDSSLVHALQSIGSAERKAKSLSES 407 (457)
Q Consensus 379 PR-----~Gl~~~v~~~l~~~~~~~~ivyvs~~~ 407 (457)
.. ......+++++.+.. .+++||+|+..
T Consensus 74 ~~~~~~~~~~~~~l~~a~~~~~-~~~~v~~Ss~~ 106 (286)
T 2zcu_A 74 SSEVGQRAPQHRNVINAAKAAG-VKFIAYTSLLH 106 (286)
T ss_dssp --------CHHHHHHHHHHHHT-CCEEEEEEETT
T ss_pred CCCchHHHHHHHHHHHHHHHcC-CCEEEEECCCC
Confidence 21 122335667776664 78999998543
No 405
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=56.35 E-value=44 Score=29.92 Aligned_cols=91 Identities=11% Similarity=0.054 Sum_probs=53.1
Q ss_pred CCeEEEEcccccHHHHHHHhhCCC-CEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcC--cccc-cCCccEE
Q 044572 299 GASVTDLYAGAGVIGLSLAAARKC-RSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIE--PLSW-LVGSDVL 374 (457)
Q Consensus 299 ~~~vLDl~cG~G~~sl~lA~~~~~-~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~--~~~~-~~~~D~v 374 (457)
..+++= ||.|.+|..+++.... ..|+++|.+++.++.++ . .+.++.+|+.+. +... ....|+|
T Consensus 9 ~~~viI--~G~G~~G~~la~~L~~~g~v~vid~~~~~~~~~~----~-------~~~~i~gd~~~~~~l~~a~i~~ad~v 75 (234)
T 2aef_A 9 SRHVVI--CGWSESTLECLRELRGSEVFVLAEDENVRKKVLR----S-------GANFVHGDPTRVSDLEKANVRGARAV 75 (234)
T ss_dssp -CEEEE--ESCCHHHHHHHHHSTTSEEEEEESCGGGHHHHHH----T-------TCEEEESCTTCHHHHHHTTCTTCSEE
T ss_pred CCEEEE--ECCChHHHHHHHHHHhCCeEEEEECCHHHHHHHh----c-------CCeEEEcCCCCHHHHHhcCcchhcEE
Confidence 345653 4558888888865321 12999999998876554 1 257899998753 2111 3568888
Q ss_pred EECCCCCCccHHHHHHHHhcCCCC-cEEEE
Q 044572 375 VVDPPRKGLDSSLVHALQSIGSAE-RKAKS 403 (457)
Q Consensus 375 i~DPPR~Gl~~~v~~~l~~~~~~~-~ivyv 403 (457)
|+--|.......+...++++. ++ +++..
T Consensus 76 i~~~~~d~~n~~~~~~a~~~~-~~~~iia~ 104 (234)
T 2aef_A 76 IVDLESDSETIHCILGIRKID-ESVRIIAE 104 (234)
T ss_dssp EECCSCHHHHHHHHHHHHHHC-SSSEEEEE
T ss_pred EEcCCCcHHHHHHHHHHHHHC-CCCeEEEE
Confidence 875543222223444555565 44 44443
No 406
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=56.33 E-value=18 Score=34.64 Aligned_cols=44 Identities=23% Similarity=0.165 Sum_probs=33.2
Q ss_pred CCCCeEEEEcccc-cHHHHHHHhhCCCCEEEEEeCCHHHHHHHHH
Q 044572 297 PYGASVTDLYAGA-GVIGLSLAAARKCRSVKCVEINKESQLSFEK 340 (457)
Q Consensus 297 ~~~~~vLDl~cG~-G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~ 340 (457)
.+|++||=.|+|. |.+++.+|+..++.+|+++|.+++-++.+++
T Consensus 162 ~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~ 206 (348)
T 4eez_A 162 KPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKK 206 (348)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHH
T ss_pred CCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhh
Confidence 4789998888764 4566666665566799999999987776654
No 407
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=56.18 E-value=1.1e+02 Score=27.07 Aligned_cols=73 Identities=16% Similarity=0.092 Sum_probs=45.9
Q ss_pred eEEEEcccccHHHHHHHhh---CCCCEEEEE-eCCHHHHHHHHHHHhhCCCCCCCcEEE-EEccCCcCcc--cc------
Q 044572 301 SVTDLYAGAGVIGLSLAAA---RKCRSVKCV-EINKESQLSFEKTVSRLPKSVDGNISW-HNADNSIEPL--SW------ 367 (457)
Q Consensus 301 ~vLDl~cG~G~~sl~lA~~---~~~~~V~gV-E~~~~av~~A~~Na~~~~~~~~~nv~~-~~~d~~~~~~--~~------ 367 (457)
++| +-.|+|.+|..+++. .| .+|+++ +.+++..+...+.++..+ .++.+ +.+|+.+... ..
T Consensus 3 ~vl-ITGasggiG~~~a~~l~~~G-~~v~~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~ 76 (245)
T 2ph3_A 3 KAL-ITGASRGIGRAIALRLAEDG-FALAIHYGQNREKAEEVAEEARRRG----SPLVAVLGANLLEAEAATALVHQAAE 76 (245)
T ss_dssp EEE-ETTTTSHHHHHHHHHHHTTT-CEEEEEESSCHHHHHHHHHHHHHTT----CSCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred EEE-EeCCCchHHHHHHHHHHHCC-CEEEEEcCCCHHHHHHHHHHHHhcC----CceEEEEeccCCCHHHHHHHHHHHHH
Confidence 444 556788888887753 23 478888 888887766555554421 34566 8889876311 11
Q ss_pred -cCCccEEEECCC
Q 044572 368 -LVGSDVLVVDPP 379 (457)
Q Consensus 368 -~~~~D~vi~DPP 379 (457)
.+..|+||.+--
T Consensus 77 ~~~~~d~li~~Ag 89 (245)
T 2ph3_A 77 VLGGLDTLVNNAG 89 (245)
T ss_dssp HHTCCCEEEECCC
T ss_pred hcCCCCEEEECCC
Confidence 246899988754
No 408
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=55.93 E-value=15 Score=35.46 Aligned_cols=44 Identities=16% Similarity=0.242 Sum_probs=34.3
Q ss_pred CCCCCeEEEEccc--ccHHHHHHHhhC-CCCEEEEEeCCHHHHHHHHH
Q 044572 296 VPYGASVTDLYAG--AGVIGLSLAAAR-KCRSVKCVEINKESQLSFEK 340 (457)
Q Consensus 296 ~~~~~~vLDl~cG--~G~~sl~lA~~~-~~~~V~gVE~~~~av~~A~~ 340 (457)
+.++++||-.|+| .|...+.+++.. |+ +|+++|.+++.++.+++
T Consensus 168 ~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga-~Vi~~~~~~~~~~~~~~ 214 (347)
T 1jvb_A 168 LDPTKTLLVVGAGGGLGTMAVQIAKAVSGA-TIIGVDVREEAVEAAKR 214 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHTCC-EEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEECCCccHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHHHH
Confidence 3478999999886 666777777665 65 79999999998887753
No 409
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=55.65 E-value=17 Score=33.41 Aligned_cols=91 Identities=12% Similarity=0.107 Sum_probs=56.0
Q ss_pred EcccccHHHHHHHhhCC----CCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcC--cccccCCccEEEECC
Q 044572 305 LYAGAGVIGLSLAAARK----CRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIE--PLSWLVGSDVLVVDP 378 (457)
Q Consensus 305 l~cG~G~~sl~lA~~~~----~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~--~~~~~~~~D~vi~DP 378 (457)
+-.|+|.+|..+++..- ..+|++++.++...+.. .. .+++++.+|+.+. +.......|+||..-
T Consensus 5 VtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l----~~------~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a 74 (287)
T 2jl1_A 5 VTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTL----AD------QGVEVRHGDYNQPESLQKAFAGVSKLLFIS 74 (287)
T ss_dssp ETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHH----HH------TTCEEEECCTTCHHHHHHHTTTCSEEEECC
T ss_pred EEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHH----hh------cCCeEEEeccCCHHHHHHHHhcCCEEEEcC
Confidence 45688999998876321 23799999886543321 11 2468899998763 222345689988754
Q ss_pred CCC-C------ccHHHHHHHHhcCCCCcEEEEecc
Q 044572 379 PRK-G------LDSSLVHALQSIGSAERKAKSLSE 406 (457)
Q Consensus 379 PR~-G------l~~~v~~~l~~~~~~~~ivyvs~~ 406 (457)
... + ....+++++.+.. .+++||+|+.
T Consensus 75 ~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~Ss~ 108 (287)
T 2jl1_A 75 GPHYDNTLLIVQHANVVKAARDAG-VKHIAYTGYA 108 (287)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHTT-CSEEEEEEET
T ss_pred CCCcCchHHHHHHHHHHHHHHHcC-CCEEEEECCC
Confidence 321 1 0123455555554 6899999853
No 410
>2g1p_A DNA adenine methylase; DAM methylation, GATC recognition, base flipping, bacterial factor, transferase-DNA complex; HET: DNA SAH; 1.89A {Escherichia coli} PDB: 2ore_D*
Probab=55.64 E-value=5.9 Score=37.61 Aligned_cols=31 Identities=19% Similarity=0.089 Sum_probs=23.7
Q ss_pred CcEEEEEccCCcCcccccCCccEEEECCCCCC
Q 044572 351 GNISWHNADNSIEPLSWLVGSDVLVVDPPRKG 382 (457)
Q Consensus 351 ~nv~~~~~d~~~~~~~~~~~~D~vi~DPPR~G 382 (457)
.++++.++|..+.+... ..-|+|.+|||+..
T Consensus 156 ~~v~i~~~Df~~~i~~~-~~~~fvY~DPPY~~ 186 (278)
T 2g1p_A 156 QNAFFYCESYADSMARA-DDSSVVYCDPPYAP 186 (278)
T ss_dssp GGEEEEECCHHHHHTTC-CTTEEEEECCSCCC
T ss_pred CCcEEEeCCHHHHHHhc-CCCCEEEeCCcccc
Confidence 36899999988765543 34589999999853
No 411
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=55.57 E-value=16 Score=35.62 Aligned_cols=95 Identities=18% Similarity=0.099 Sum_probs=58.0
Q ss_pred CCCCCeEEEEc--ccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcC---cccc-cC
Q 044572 296 VPYGASVTDLY--AGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIE---PLSW-LV 369 (457)
Q Consensus 296 ~~~~~~vLDl~--cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~---~~~~-~~ 369 (457)
+.+|++||=.| .|+|..++.+|+..|+ +|++++.+++.++.+++ ++ .+ ..+..+-.++ +... ..
T Consensus 161 ~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~----~G---a~--~~~~~~~~~~~~~~~~~~~~ 230 (362)
T 2c0c_A 161 LSEGKKVLVTAAAGGTGQFAMQLSKKAKC-HVIGTCSSDEKSAFLKS----LG---CD--RPINYKTEPVGTVLKQEYPE 230 (362)
T ss_dssp CCTTCEEEETTTTBTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH----TT---CS--EEEETTTSCHHHHHHHHCTT
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHH----cC---Cc--EEEecCChhHHHHHHHhcCC
Confidence 34789999888 5778888888887776 89999999988877764 22 12 2222221111 1111 13
Q ss_pred CccEEEECCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 370 GSDVLVVDPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 370 ~~D~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
.+|+||-.- |- ..+...+..+++.++++.++
T Consensus 231 g~D~vid~~---g~-~~~~~~~~~l~~~G~iv~~g 261 (362)
T 2c0c_A 231 GVDVVYESV---GG-AMFDLAVDALATKGRLIVIG 261 (362)
T ss_dssp CEEEEEECS---CT-HHHHHHHHHEEEEEEEEECC
T ss_pred CCCEEEECC---CH-HHHHHHHHHHhcCCEEEEEe
Confidence 588887532 22 33445555666566777765
No 412
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=55.55 E-value=13 Score=35.72 Aligned_cols=95 Identities=20% Similarity=0.040 Sum_probs=55.4
Q ss_pred CCCCeEEEEcc--cccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEc-cCCcC---cccc-cC
Q 044572 297 PYGASVTDLYA--GAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNA-DNSIE---PLSW-LV 369 (457)
Q Consensus 297 ~~~~~vLDl~c--G~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~-d~~~~---~~~~-~~ 369 (457)
.+|++||-.|+ |.|...+.+|+..|+ +|++++.+++.++.+++. ++ .+ ..+.. +..+. +... ..
T Consensus 154 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~---~g---~~--~~~d~~~~~~~~~~~~~~~~~ 224 (345)
T 2j3h_A 154 KEGETVYVSAASGAVGQLVGQLAKMMGC-YVVGSAGSKEKVDLLKTK---FG---FD--DAFNYKEESDLTAALKRCFPN 224 (345)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHT---SC---CS--EEEETTSCSCSHHHHHHHCTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHH---cC---Cc--eEEecCCHHHHHHHHHHHhCC
Confidence 47899998886 677777777776665 899999999887776532 21 11 12221 11111 1111 13
Q ss_pred CccEEEECCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 370 GSDVLVVDPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 370 ~~D~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
.+|+||-.- |. ..+...+..+++.++++.+.
T Consensus 225 ~~d~vi~~~---g~-~~~~~~~~~l~~~G~~v~~G 255 (345)
T 2j3h_A 225 GIDIYFENV---GG-KMLDAVLVNMNMHGRIAVCG 255 (345)
T ss_dssp CEEEEEESS---CH-HHHHHHHTTEEEEEEEEECC
T ss_pred CCcEEEECC---CH-HHHHHHHHHHhcCCEEEEEc
Confidence 589887643 32 23444455555556666654
No 413
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=55.26 E-value=30 Score=31.79 Aligned_cols=77 Identities=9% Similarity=-0.044 Sum_probs=51.3
Q ss_pred CCCeEEEEcc----ccc-HHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcc-------
Q 044572 298 YGASVTDLYA----GAG-VIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPL------- 365 (457)
Q Consensus 298 ~~~~vLDl~c----G~G-~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~------- 365 (457)
+|+++|=-|+ |.| .++..||+. | .+|+.++.+++.++.+.+-++..+ ..++.++..|+.+...
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~-G-a~Vvi~~r~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~ 79 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQL-G-AKLVFTYRKERSRKELEKLLEQLN---QPEAHLYQIDVQSDEEVINGFEQ 79 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHT-T-CEEEEEESSGGGHHHHHHHHGGGT---CSSCEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHC-C-CEEEEEECCHHHHHHHHHHHHhcC---CCcEEEEEccCCCHHHHHHHHHH
Confidence 4778776674 333 255566653 4 389999999988888777766532 2467899999876311
Q ss_pred --cccCCccEEEECCC
Q 044572 366 --SWLVGSDVLVVDPP 379 (457)
Q Consensus 366 --~~~~~~D~vi~DPP 379 (457)
+..++.|++|.+--
T Consensus 80 ~~~~~G~iD~lvnnAg 95 (256)
T 4fs3_A 80 IGKDVGNIDGVYHSIA 95 (256)
T ss_dssp HHHHHCCCSEEEECCC
T ss_pred HHHHhCCCCEEEeccc
Confidence 11257899987643
No 414
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=55.10 E-value=47 Score=31.29 Aligned_cols=105 Identities=15% Similarity=0.151 Sum_probs=57.9
Q ss_pred CCeEEEEcccccHHHHHHHhh---CCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcC--cccccCCccE
Q 044572 299 GASVTDLYAGAGVIGLSLAAA---RKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIE--PLSWLVGSDV 373 (457)
Q Consensus 299 ~~~vLDl~cG~G~~sl~lA~~---~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~--~~~~~~~~D~ 373 (457)
+++|| +-.|+|.+|.++++. .| .+|+++..+++..+.+... .... ....+++++.+|+.+. +.......|+
T Consensus 5 ~~~vl-VTGatGfIG~~l~~~L~~~G-~~V~~~~r~~~~~~~~~~~-~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 80 (337)
T 2c29_D 5 SETVC-VTGASGFIGSWLVMRLLERG-YTVRATVRDPTNVKKVKHL-LDLP-KAETHLTLWKADLADEGSFDEAIKGCTG 80 (337)
T ss_dssp -CEEE-ETTTTSHHHHHHHHHHHHTT-CEEEEEESCTTCHHHHHHH-HTST-THHHHEEEEECCTTSTTTTHHHHTTCSE
T ss_pred CCEEE-EECCchHHHHHHHHHHHHCC-CEEEEEECCcchhHHHHHH-Hhcc-cCCCeEEEEEcCCCCHHHHHHHHcCCCE
Confidence 45666 667899999888753 23 4799888776533222211 1110 0012578999998763 2223356798
Q ss_pred EEECCC---CCCccH-------------HHHHHHHhcCCCCcEEEEeccC
Q 044572 374 LVVDPP---RKGLDS-------------SLVHALQSIGSAERKAKSLSES 407 (457)
Q Consensus 374 vi~DPP---R~Gl~~-------------~v~~~l~~~~~~~~ivyvs~~~ 407 (457)
||..-. ....++ .+++++.+....+++||+||.+
T Consensus 81 Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~ 130 (337)
T 2c29_D 81 VFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAG 130 (337)
T ss_dssp EEECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGG
T ss_pred EEEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHh
Confidence 876321 111111 2344444443368999998643
No 415
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=54.84 E-value=59 Score=27.77 Aligned_cols=94 Identities=14% Similarity=0.132 Sum_probs=59.2
Q ss_pred CeEEEEcccccHHHHHHHhh---CCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcC--cccccCCccEE
Q 044572 300 ASVTDLYAGAGVIGLSLAAA---RKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIE--PLSWLVGSDVL 374 (457)
Q Consensus 300 ~~vLDl~cG~G~~sl~lA~~---~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~--~~~~~~~~D~v 374 (457)
++|| +-.|+|.+|..+++. .+ .+|++++.++.... . ....+++++.+|+.+. +.......|+|
T Consensus 4 ~~il-VtGatG~iG~~l~~~l~~~g-~~V~~~~r~~~~~~-------~---~~~~~~~~~~~D~~~~~~~~~~~~~~d~v 71 (206)
T 1hdo_A 4 KKIA-IFGATGQTGLTTLAQAVQAG-YEVTVLVRDSSRLP-------S---EGPRPAHVVVGDVLQAADVDKTVAGQDAV 71 (206)
T ss_dssp CEEE-EESTTSHHHHHHHHHHHHTT-CEEEEEESCGGGSC-------S---SSCCCSEEEESCTTSHHHHHHHHTTCSEE
T ss_pred CEEE-EEcCCcHHHHHHHHHHHHCC-CeEEEEEeChhhcc-------c---ccCCceEEEEecCCCHHHHHHHHcCCCEE
Confidence 4555 556789888887753 23 48999999875421 1 0124688999998763 22233568998
Q ss_pred EECCCCCCc----------cHHHHHHHHhcCCCCcEEEEecc
Q 044572 375 VVDPPRKGL----------DSSLVHALQSIGSAERKAKSLSE 406 (457)
Q Consensus 375 i~DPPR~Gl----------~~~v~~~l~~~~~~~~ivyvs~~ 406 (457)
|..-..... ...+++++.+.. .++++|+|+.
T Consensus 72 i~~a~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~v~~Ss~ 112 (206)
T 1hdo_A 72 IVLLGTRNDLSPTTVMSEGARNIVAAMKAHG-VDKVVACTSA 112 (206)
T ss_dssp EECCCCTTCCSCCCHHHHHHHHHHHHHHHHT-CCEEEEECCG
T ss_pred EECccCCCCCCccchHHHHHHHHHHHHHHhC-CCeEEEEeee
Confidence 876542211 224566666654 7899999853
No 416
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=54.78 E-value=60 Score=29.04 Aligned_cols=75 Identities=16% Similarity=0.069 Sum_probs=50.4
Q ss_pred CCeEEEEcccccHHHHHHHhh---CCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcc--c-------
Q 044572 299 GASVTDLYAGAGVIGLSLAAA---RKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPL--S------- 366 (457)
Q Consensus 299 ~~~vLDl~cG~G~~sl~lA~~---~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~--~------- 366 (457)
++++| +-.|+|.+|..+|+. .| .+|+.++.+++..+...+.++.. ..++.++..|+.+... .
T Consensus 5 ~k~vl-ITGas~gIG~~~a~~l~~~G-~~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~ 78 (247)
T 3lyl_A 5 EKVAL-VTGASRGIGFEVAHALASKG-ATVVGTATSQASAEKFENSMKEK----GFKARGLVLNISDIESIQNFFAEIKA 78 (247)
T ss_dssp TCEEE-ESSCSSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEE-EECCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhc----CCceEEEEecCCCHHHHHHHHHHHHH
Confidence 55666 455667777666642 33 48999999999888777666652 2468999999876311 1
Q ss_pred ccCCccEEEECCC
Q 044572 367 WLVGSDVLVVDPP 379 (457)
Q Consensus 367 ~~~~~D~vi~DPP 379 (457)
..++.|++|.+.-
T Consensus 79 ~~~~id~li~~Ag 91 (247)
T 3lyl_A 79 ENLAIDILVNNAG 91 (247)
T ss_dssp TTCCCSEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 1246899988754
No 417
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=54.42 E-value=13 Score=36.86 Aligned_cols=47 Identities=23% Similarity=0.206 Sum_probs=23.9
Q ss_pred ECCCCCCCCCH-HHHHHHHHHHHhhCC-C------CCeEEEEcccccHHHHHHHh
Q 044572 272 LAPSSFGQANT-RAFDILLRKLQKYVP-Y------GASVTDLYAGAGVIGLSLAA 318 (457)
Q Consensus 272 i~~~~FfQ~n~-~~~~~l~~~i~~~~~-~------~~~vLDl~cG~G~~sl~lA~ 318 (457)
++..+-.|-.. ..+..+++.+++.+. . ..+|+|+|||+|..++.+..
T Consensus 18 Y~~nS~~Q~~~~~~~~~~~~~ai~~l~~~~~~~~~~~~IaDlGCssG~Nt~~~v~ 72 (374)
T 3b5i_A 18 YANNSLAQAMHARSMLHLLEETLENVHLNSSASPPPFTAVDLGCSSGANTVHIID 72 (374)
T ss_dssp --------CTTHHHHHHHHHHHHHTSCCCCSSSCCCEEEEEETCCSSHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHhhccccCCCCceEEEecCCCCChhHHHHHH
Confidence 34555566542 222334443333322 1 46799999999999998853
No 418
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=54.30 E-value=48 Score=30.15 Aligned_cols=76 Identities=16% Similarity=0.163 Sum_probs=46.6
Q ss_pred CCeEEEEcccccHHHHHHHhh---CCCCEEEEEeCCHHH-HHHHHHHHhhCCCCCCCcEEEEEccCCcCc--ccc-----
Q 044572 299 GASVTDLYAGAGVIGLSLAAA---RKCRSVKCVEINKES-QLSFEKTVSRLPKSVDGNISWHNADNSIEP--LSW----- 367 (457)
Q Consensus 299 ~~~vLDl~cG~G~~sl~lA~~---~~~~~V~gVE~~~~a-v~~A~~Na~~~~~~~~~nv~~~~~d~~~~~--~~~----- 367 (457)
++++| +-.|+|.+|..+++. .| .+|+.++.+++. ++.+.+.++.. . ..++.++.+|+.+.. ...
T Consensus 4 ~k~vl-VTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~--~-~~~~~~~~~D~~~~~~v~~~~~~~~ 78 (260)
T 1x1t_A 4 GKVAV-VTGSTSGIGLGIATALAAQG-ADIVLNGFGDAAEIEKVRAGLAAQ--H-GVKVLYDGADLSKGEAVRGLVDNAV 78 (260)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHTT-CEEEEECCSCHHHHHHHHHHHHHH--H-TSCEEEECCCTTSHHHHHHHHHHHH
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHcC-CEEEEEeCCcchHHHHHHHHHHhc--c-CCcEEEEECCCCCHHHHHHHHHHHH
Confidence 45565 455677777776653 33 479999998776 65554444321 0 135788999987631 111
Q ss_pred --cCCccEEEECCC
Q 044572 368 --LVGSDVLVVDPP 379 (457)
Q Consensus 368 --~~~~D~vi~DPP 379 (457)
.+..|++|.+--
T Consensus 79 ~~~g~iD~lv~~Ag 92 (260)
T 1x1t_A 79 RQMGRIDILVNNAG 92 (260)
T ss_dssp HHHSCCSEEEECCC
T ss_pred HhcCCCCEEEECCC
Confidence 146899988753
No 419
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=54.10 E-value=15 Score=35.16 Aligned_cols=94 Identities=15% Similarity=0.011 Sum_probs=55.7
Q ss_pred CCCCeEEEEc--ccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCc---ccc--cC
Q 044572 297 PYGASVTDLY--AGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEP---LSW--LV 369 (457)
Q Consensus 297 ~~~~~vLDl~--cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~---~~~--~~ 369 (457)
.+|++||=.| .|.|..++.+|+..|+ +|++++.+++-++.+++ ++ .+ ..+..+-.+.. .+. ..
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~----~g---a~--~~~~~~~~~~~~~~~~~~~~~ 216 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKMKGA-HTIAVASTDEKLKIAKE----YG---AE--YLINASKEDILRQVLKFTNGK 216 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH----TT---CS--EEEETTTSCHHHHHHHHTTTS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH----cC---Cc--EEEeCCCchHHHHHHHHhCCC
Confidence 4789999877 3667777778877776 89999999998877654 21 12 22322222211 111 13
Q ss_pred CccEEEECCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 370 GSDVLVVDPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 370 ~~D~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
.+|+||-.-. - ..+...+..+++.++++.+.
T Consensus 217 g~D~vid~~g---~-~~~~~~~~~l~~~G~iv~~G 247 (334)
T 3qwb_A 217 GVDASFDSVG---K-DTFEISLAALKRKGVFVSFG 247 (334)
T ss_dssp CEEEEEECCG---G-GGHHHHHHHEEEEEEEEECC
T ss_pred CceEEEECCC---h-HHHHHHHHHhccCCEEEEEc
Confidence 5898775332 1 23445555565556666664
No 420
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=53.85 E-value=54 Score=30.62 Aligned_cols=79 Identities=14% Similarity=0.024 Sum_probs=51.4
Q ss_pred CCCeEEEEcccccHHHHHHHhh---CCC--CEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcc-------
Q 044572 298 YGASVTDLYAGAGVIGLSLAAA---RKC--RSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPL------- 365 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~---~~~--~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~------- 365 (457)
.++++|=-| |+|.+|..+|+. .|+ ..|+.++.+.+.++.+.+.++.. ....++.++.+|+.+...
T Consensus 32 ~~k~~lVTG-as~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~~Dv~d~~~v~~~~~~ 108 (287)
T 3rku_A 32 AKKTVLITG-ASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQE--FPNAKVHVAQLDITQAEKIKPFIEN 108 (287)
T ss_dssp TTCEEEEES-TTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHH--CTTCEEEEEECCTTCGGGHHHHHHT
T ss_pred CCCEEEEec-CCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhh--CCCCeEEEEECCCCCHHHHHHHHHH
Confidence 367777444 567777776643 122 38999999999888777666542 112478899999976421
Q ss_pred --cccCCccEEEECCC
Q 044572 366 --SWLVGSDVLVVDPP 379 (457)
Q Consensus 366 --~~~~~~D~vi~DPP 379 (457)
+..+..|++|.+--
T Consensus 109 ~~~~~g~iD~lVnnAG 124 (287)
T 3rku_A 109 LPQEFKDIDILVNNAG 124 (287)
T ss_dssp SCGGGCSCCEEEECCC
T ss_pred HHHhcCCCCEEEECCC
Confidence 11246899987653
No 421
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=53.61 E-value=72 Score=29.07 Aligned_cols=75 Identities=13% Similarity=0.016 Sum_probs=49.7
Q ss_pred CCCeEEEEcccccHHHHHHHhh---CCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcc--c------
Q 044572 298 YGASVTDLYAGAGVIGLSLAAA---RKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPL--S------ 366 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~---~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~--~------ 366 (457)
.++++|=-|+ +|.+|..+|+. .| .+|+.++.+++.++.+.+.++.. ..++.++.+|+.+... .
T Consensus 10 ~~k~vlVTGa-s~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~ 83 (264)
T 3ucx_A 10 TDKVVVISGV-GPALGTTLARRCAEQG-ADLVLAARTVERLEDVAKQVTDT----GRRALSVGTDITDDAQVAHLVDETM 83 (264)
T ss_dssp TTCEEEEESC-CTTHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCcEEEEECC-CcHHHHHHHHHHHHCc-CEEEEEeCCHHHHHHHHHHHHhc----CCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 4677775554 45555554432 33 47999999999888877776652 2478999999986321 1
Q ss_pred -ccCCccEEEECC
Q 044572 367 -WLVGSDVLVVDP 378 (457)
Q Consensus 367 -~~~~~D~vi~DP 378 (457)
..++.|++|.+-
T Consensus 84 ~~~g~id~lv~nA 96 (264)
T 3ucx_A 84 KAYGRVDVVINNA 96 (264)
T ss_dssp HHTSCCSEEEECC
T ss_pred HHcCCCcEEEECC
Confidence 124689999875
No 422
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=52.97 E-value=1.3e+02 Score=27.09 Aligned_cols=76 Identities=16% Similarity=0.124 Sum_probs=47.3
Q ss_pred CCeEEEEcccccHHHHHHHhh---CCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCc--ccc------
Q 044572 299 GASVTDLYAGAGVIGLSLAAA---RKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEP--LSW------ 367 (457)
Q Consensus 299 ~~~vLDl~cG~G~~sl~lA~~---~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~--~~~------ 367 (457)
++++| +-.|+|.+|..+++. .| .+|+.++.+++.++.+.+.++.. ....++.++.+|+.+.. ...
T Consensus 7 ~k~vl-VTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 82 (260)
T 2z1n_A 7 GKLAV-VTAGSSGLGFASALELARNG-ARLLLFSRNREKLEAAASRIASL--VSGAQVDIVAGDIREPGDIDRLFEKARD 82 (260)
T ss_dssp TCEEE-EETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHH--STTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEE-EECCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhc--CCCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 56666 445667777766642 33 48999999998777665554321 00126889999987631 111
Q ss_pred -cCCccEEEECCC
Q 044572 368 -LVGSDVLVVDPP 379 (457)
Q Consensus 368 -~~~~D~vi~DPP 379 (457)
.+ .|++|.+--
T Consensus 83 ~~g-id~lv~~Ag 94 (260)
T 2z1n_A 83 LGG-ADILVYSTG 94 (260)
T ss_dssp TTC-CSEEEECCC
T ss_pred hcC-CCEEEECCC
Confidence 13 899988754
No 423
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=52.77 E-value=9.6 Score=37.12 Aligned_cols=44 Identities=16% Similarity=0.123 Sum_probs=34.3
Q ss_pred CCCCCeEEEEccc-ccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHH
Q 044572 296 VPYGASVTDLYAG-AGVIGLSLAAARKCRSVKCVEINKESQLSFEK 340 (457)
Q Consensus 296 ~~~~~~vLDl~cG-~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~ 340 (457)
+.+|++||-.|+| .|.+++.+|+..|+ +|++++.+++-++.+++
T Consensus 177 ~~~g~~VlV~GaG~vG~~~~qlak~~Ga-~Vi~~~~~~~~~~~~~~ 221 (360)
T 1piw_A 177 CGPGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKREDAMK 221 (360)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHH
Confidence 3478999998874 46777777776666 69999999888887764
No 424
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=52.60 E-value=7.3 Score=37.67 Aligned_cols=94 Identities=15% Similarity=0.017 Sum_probs=54.4
Q ss_pred CCCeEEEEccc-ccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcC---cccc-cCCcc
Q 044572 298 YGASVTDLYAG-AGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIE---PLSW-LVGSD 372 (457)
Q Consensus 298 ~~~~vLDl~cG-~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~---~~~~-~~~~D 372 (457)
+|++||-.|+| +|.+++.+|+..|+++|++++.+++-++.+++- . + ..+..+-.++ +.+. ...+|
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l--a------~--~v~~~~~~~~~~~~~~~~~~g~D 233 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY--A------D--RLVNPLEEDLLEVVRRVTGSGVE 233 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT--C------S--EEECTTTSCHHHHHHHHHSSCEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh--H------H--hccCcCccCHHHHHHHhcCCCCC
Confidence 68899988863 467777788777766899999998876655431 1 1 1222111111 1111 23588
Q ss_pred EEEECCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 373 VLVVDPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 373 ~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
+||--- |-...+...+..+++.++++.+.
T Consensus 234 ~vid~~---g~~~~~~~~~~~l~~~G~iv~~g 262 (343)
T 2dq4_A 234 VLLEFS---GNEAAIHQGLMALIPGGEARILG 262 (343)
T ss_dssp EEEECS---CCHHHHHHHHHHEEEEEEEEECC
T ss_pred EEEECC---CCHHHHHHHHHHHhcCCEEEEEe
Confidence 887532 22233445555666556666664
No 425
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=52.47 E-value=14 Score=35.29 Aligned_cols=94 Identities=12% Similarity=-0.016 Sum_probs=54.7
Q ss_pred CCCCeEEEEc--ccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCc---cccc--C
Q 044572 297 PYGASVTDLY--AGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEP---LSWL--V 369 (457)
Q Consensus 297 ~~~~~vLDl~--cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~---~~~~--~ 369 (457)
.+|++||=.+ +|.|..++.+|+..|+ +|++++.+++-++.+++. + .+ ..+..+-.+.. .+.. .
T Consensus 139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~----G---a~--~~~~~~~~~~~~~~~~~~~~~ 208 (325)
T 3jyn_A 139 KPGEIILFHAAAGGVGSLACQWAKALGA-KLIGTVSSPEKAAHAKAL----G---AW--ETIDYSHEDVAKRVLELTDGK 208 (325)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHH----T---CS--EEEETTTSCHHHHHHHHTTTC
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc----C---CC--EEEeCCCccHHHHHHHHhCCC
Confidence 4688998766 3567777777776666 899999999988877642 1 11 22222212211 1111 3
Q ss_pred CccEEEECCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 370 GSDVLVVDPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 370 ~~D~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
.+|+||-.- |- ..+...+..+++.++++.+.
T Consensus 209 g~Dvvid~~---g~-~~~~~~~~~l~~~G~iv~~g 239 (325)
T 3jyn_A 209 KCPVVYDGV---GQ-DTWLTSLDSVAPRGLVVSFG 239 (325)
T ss_dssp CEEEEEESS---CG-GGHHHHHTTEEEEEEEEECC
T ss_pred CceEEEECC---Ch-HHHHHHHHHhcCCCEEEEEe
Confidence 588877532 22 23445555565566666664
No 426
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=52.07 E-value=13 Score=36.02 Aligned_cols=93 Identities=16% Similarity=0.050 Sum_probs=54.9
Q ss_pred CCCCeEEEEcc--cccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcC---ccccc--C
Q 044572 297 PYGASVTDLYA--GAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIE---PLSWL--V 369 (457)
Q Consensus 297 ~~~~~vLDl~c--G~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~---~~~~~--~ 369 (457)
.+|++||=.|+ |.|..++.+|+..|+ +|++++.+++-.+.+++. + .+ ..+..+ .+. +.+.. .
T Consensus 158 ~~g~~VlV~Gasg~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~----g---a~--~v~~~~-~~~~~~v~~~~~~~ 226 (342)
T 4eye_A 158 RAGETVLVLGAAGGIGTAAIQIAKGMGA-KVIAVVNRTAATEFVKSV----G---AD--IVLPLE-EGWAKAVREATGGA 226 (342)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHH----T---CS--EEEESS-TTHHHHHHHHTTTS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhc----C---Cc--EEecCc-hhHHHHHHHHhCCC
Confidence 46899997775 667788888887776 899999999888777652 1 12 223322 221 11111 2
Q ss_pred CccEEEECCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 370 GSDVLVVDPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 370 ~~D~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
.+|+||-.-.. ..+...+..+++.++++.+.
T Consensus 227 g~Dvvid~~g~----~~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 227 GVDMVVDPIGG----PAFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp CEEEEEESCC------CHHHHHHTEEEEEEEEEC-
T ss_pred CceEEEECCch----hHHHHHHHhhcCCCEEEEEE
Confidence 58888753322 12444555565556666553
No 427
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=51.75 E-value=1.1e+02 Score=28.01 Aligned_cols=75 Identities=21% Similarity=0.113 Sum_probs=47.9
Q ss_pred CCCeEEEEcccccHHHHHHHhh---CCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCc--cc------
Q 044572 298 YGASVTDLYAGAGVIGLSLAAA---RKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEP--LS------ 366 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~---~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~--~~------ 366 (457)
.++++|= -.|+|.+|..+++. .| .+|+.++.+++.++...+.++. . .++.++.+|+.+.. ..
T Consensus 28 ~~k~vlV-TGas~gIG~aia~~L~~~G-~~V~~~~r~~~~~~~~~~~l~~---~--~~~~~~~~Dv~d~~~v~~~~~~~~ 100 (276)
T 2b4q_A 28 AGRIALV-TGGSRGIGQMIAQGLLEAG-ARVFICARDAEACADTATRLSA---Y--GDCQAIPADLSSEAGARRLAQALG 100 (276)
T ss_dssp TTCEEEE-ETTTSHHHHHHHHHHHHTT-CEEEEECSCHHHHHHHHHHHTT---S--SCEEECCCCTTSHHHHHHHHHHHH
T ss_pred CCCEEEE-eCCCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHh---c--CceEEEEeeCCCHHHHHHHHHHHH
Confidence 3566774 44567777666642 33 4899999999877665555432 1 26788899987631 11
Q ss_pred -ccCCccEEEECCC
Q 044572 367 -WLVGSDVLVVDPP 379 (457)
Q Consensus 367 -~~~~~D~vi~DPP 379 (457)
..+..|++|.+--
T Consensus 101 ~~~g~iD~lvnnAg 114 (276)
T 2b4q_A 101 ELSARLDILVNNAG 114 (276)
T ss_dssp HHCSCCSEEEECCC
T ss_pred HhcCCCCEEEECCC
Confidence 1246899988753
No 428
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=51.73 E-value=17 Score=35.25 Aligned_cols=43 Identities=23% Similarity=0.235 Sum_probs=32.7
Q ss_pred CCCCCeEEEEcc-cccHHHHHHHhhC-CCCEEEEEeCCHHHHHHHH
Q 044572 296 VPYGASVTDLYA-GAGVIGLSLAAAR-KCRSVKCVEINKESQLSFE 339 (457)
Q Consensus 296 ~~~~~~vLDl~c-G~G~~sl~lA~~~-~~~~V~gVE~~~~av~~A~ 339 (457)
+.+|++||=.|+ |+|.+++.+|+.. |+ +|+++|.+++-++.++
T Consensus 184 ~~~g~~VlV~GaG~vG~~avqlak~~~Ga-~Vi~~~~~~~~~~~~~ 228 (359)
T 1h2b_A 184 LYPGAYVAIVGVGGLGHIAVQLLKVMTPA-TVIALDVKEEKLKLAE 228 (359)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHCCC-EEEEEESSHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCC-eEEEEeCCHHHHHHHH
Confidence 447888887776 4556667777766 65 7999999999888775
No 429
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=51.65 E-value=9.3 Score=36.38 Aligned_cols=42 Identities=17% Similarity=-0.030 Sum_probs=33.6
Q ss_pred CCCCeEEEEccc-ccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHH
Q 044572 297 PYGASVTDLYAG-AGVIGLSLAAARKCRSVKCVEINKESQLSFEK 340 (457)
Q Consensus 297 ~~~~~vLDl~cG-~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~ 340 (457)
.+|++||=.++| +|.+++.+|+..|+ +|++++ +++-.+.+++
T Consensus 141 ~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~-~~~~~~~~~~ 183 (315)
T 3goh_A 141 TKQREVLIVGFGAVNNLLTQMLNNAGY-VVDLVS-ASLSQALAAK 183 (315)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHHTC-EEEEEC-SSCCHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEE-ChhhHHHHHH
Confidence 368999888874 57788888887777 999999 8887777764
No 430
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=51.12 E-value=35 Score=31.74 Aligned_cols=77 Identities=14% Similarity=0.035 Sum_probs=49.2
Q ss_pred CCCeEEEEcccccHHHHHHHhh---CCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcc--c------
Q 044572 298 YGASVTDLYAGAGVIGLSLAAA---RKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPL--S------ 366 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~---~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~--~------ 366 (457)
.++++| +-.|+|.+|..+|+. .| .+|+.++.+++.++.+.+.+... ....+.++.+|+.+... .
T Consensus 32 ~gk~~l-VTGas~GIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~Dv~d~~~v~~~~~~~~ 106 (281)
T 4dry_A 32 EGRIAL-VTGGGTGVGRGIAQALSAEG-YSVVITGRRPDVLDAAAGEIGGR---TGNIVRAVVCDVGDPDQVAALFAAVR 106 (281)
T ss_dssp --CEEE-ETTTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHH---HSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEE-EeCCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhc---CCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 466666 555667777776653 33 48999999998887766655432 12346899999876321 1
Q ss_pred -ccCCccEEEECCC
Q 044572 367 -WLVGSDVLVVDPP 379 (457)
Q Consensus 367 -~~~~~D~vi~DPP 379 (457)
..+..|++|.+--
T Consensus 107 ~~~g~iD~lvnnAG 120 (281)
T 4dry_A 107 AEFARLDLLVNNAG 120 (281)
T ss_dssp HHHSCCSEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 1246899988753
No 431
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=50.95 E-value=1e+02 Score=28.15 Aligned_cols=73 Identities=16% Similarity=0.154 Sum_probs=47.7
Q ss_pred CCCeEEEEcccccHHHHHHHhh---CCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcc--c------
Q 044572 298 YGASVTDLYAGAGVIGLSLAAA---RKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPL--S------ 366 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~---~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~--~------ 366 (457)
.++++| +-.|+|.+|..+|+. .| .+|+.++.+++.++.+.+.. ..++.++.+|+.+... .
T Consensus 26 ~gk~vl-VTGas~gIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dv~d~~~v~~~~~~~~ 96 (266)
T 3grp_A 26 TGRKAL-VTGATGGIGEAIARCFHAQG-AIVGLHGTREDKLKEIAADL-------GKDVFVFSANLSDRKSIKQLAEVAE 96 (266)
T ss_dssp TTCEEE-ESSTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHH-------CSSEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCEEE-EeCCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHh-------CCceEEEEeecCCHHHHHHHHHHHH
Confidence 466676 555667777766643 23 48999999998876654432 1368899999976321 1
Q ss_pred -ccCCccEEEECCC
Q 044572 367 -WLVGSDVLVVDPP 379 (457)
Q Consensus 367 -~~~~~D~vi~DPP 379 (457)
..++.|++|.+--
T Consensus 97 ~~~g~iD~lvnnAg 110 (266)
T 3grp_A 97 REMEGIDILVNNAG 110 (266)
T ss_dssp HHHTSCCEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 1147899988754
No 432
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=50.74 E-value=16 Score=33.74 Aligned_cols=90 Identities=18% Similarity=0.080 Sum_probs=57.7
Q ss_pred EcccccHHHHHHHhh---CCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcC--cccccCCccEEEECCC
Q 044572 305 LYAGAGVIGLSLAAA---RKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIE--PLSWLVGSDVLVVDPP 379 (457)
Q Consensus 305 l~cG~G~~sl~lA~~---~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~--~~~~~~~~D~vi~DPP 379 (457)
+-.|+|.+|..+++. .+..+|+++..+++.... .. ..+++++.+|+.+. +.......|+||....
T Consensus 5 VtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~----~~------~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~ 74 (289)
T 3e48_A 5 LTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPD----DW------RGKVSVRQLDYFNQESMVEAFKGMDTVVFIPS 74 (289)
T ss_dssp EETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCG----GG------BTTBEEEECCTTCHHHHHHHTTTCSEEEECCC
T ss_pred EEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHH----hh------hCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCC
Confidence 456789888877753 113479999988764211 11 14689999998763 2223467899988765
Q ss_pred CCCc-------cHHHHHHHHhcCCCCcEEEEec
Q 044572 380 RKGL-------DSSLVHALQSIGSAERKAKSLS 405 (457)
Q Consensus 380 R~Gl-------~~~v~~~l~~~~~~~~ivyvs~ 405 (457)
.... ...+++++.+.. .+++||+|+
T Consensus 75 ~~~~~~~~~~~~~~l~~aa~~~g-v~~iv~~Ss 106 (289)
T 3e48_A 75 IIHPSFKRIPEVENLVYAAKQSG-VAHIIFIGY 106 (289)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHTT-CCEEEEEEE
T ss_pred CCccchhhHHHHHHHHHHHHHcC-CCEEEEEcc
Confidence 3221 124566666654 789999985
No 433
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=50.70 E-value=63 Score=24.75 Aligned_cols=83 Identities=20% Similarity=0.172 Sum_probs=51.0
Q ss_pred CCeEEEEcccccHHHHHHHhh---CCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcC--cccccCCccE
Q 044572 299 GASVTDLYAGAGVIGLSLAAA---RKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIE--PLSWLVGSDV 373 (457)
Q Consensus 299 ~~~vLDl~cG~G~~sl~lA~~---~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~--~~~~~~~~D~ 373 (457)
+.+|+=+|+ |.+|..++.. .+..+|+++|.+++.++.++ . ..+.++.+|..+. +......+|+
T Consensus 5 ~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~------~~~~~~~~d~~~~~~~~~~~~~~d~ 72 (118)
T 3ic5_A 5 RWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----R------MGVATKQVDAKDEAGLAKALGGFDA 72 (118)
T ss_dssp CEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----T------TTCEEEECCTTCHHHHHHHTTTCSE
T ss_pred cCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----h------CCCcEEEecCCCHHHHHHHHcCCCE
Confidence 356776655 7777766542 34358999999998776554 1 1346777787642 1222357899
Q ss_pred EEECCCCCCccHHHHHHHHhc
Q 044572 374 LVVDPPRKGLDSSLVHALQSI 394 (457)
Q Consensus 374 vi~DPPR~Gl~~~v~~~l~~~ 394 (457)
||.--|.. ....+.+...+.
T Consensus 73 vi~~~~~~-~~~~~~~~~~~~ 92 (118)
T 3ic5_A 73 VISAAPFF-LTPIIAKAAKAA 92 (118)
T ss_dssp EEECSCGG-GHHHHHHHHHHT
T ss_pred EEECCCch-hhHHHHHHHHHh
Confidence 98877643 234455555444
No 434
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=50.65 E-value=35 Score=32.06 Aligned_cols=77 Identities=19% Similarity=0.127 Sum_probs=50.9
Q ss_pred CCCeEEEEcccccHHHHHHHhh---CCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcc------c--
Q 044572 298 YGASVTDLYAGAGVIGLSLAAA---RKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPL------S-- 366 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~---~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~------~-- 366 (457)
.++++| +-.|+|.+|..+|+. .| .+|+.++.+++.++.+.+.++.. ...++.++.+|+.+... .
T Consensus 40 ~~k~vl-VTGas~GIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~Dv~d~~~v~~~~~~~~ 114 (293)
T 3rih_A 40 SARSVL-VTGGTKGIGRGIATVFARAG-ANVAVAARSPRELSSVTAELGEL---GAGNVIGVRLDVSDPGSCADAARTVV 114 (293)
T ss_dssp TTCEEE-ETTTTSHHHHHHHHHHHHTT-CEEEEEESSGGGGHHHHHHHTTS---SSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEE-EeCCCcHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhh---CCCcEEEEEEeCCCHHHHHHHHHHHH
Confidence 466666 555667777666643 34 38999999998887776665542 22478999999986311 1
Q ss_pred -ccCCccEEEECCC
Q 044572 367 -WLVGSDVLVVDPP 379 (457)
Q Consensus 367 -~~~~~D~vi~DPP 379 (457)
..+..|++|.+--
T Consensus 115 ~~~g~iD~lvnnAg 128 (293)
T 3rih_A 115 DAFGALDVVCANAG 128 (293)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 1246899988653
No 435
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=50.28 E-value=59 Score=25.32 Aligned_cols=76 Identities=16% Similarity=0.099 Sum_probs=47.5
Q ss_pred CCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccc-cCCccEEEECCC---CCCccHHHHHHHHhcCCC
Q 044572 322 CRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSW-LVGSDVLVVDPP---RKGLDSSLVHALQSIGSA 397 (457)
Q Consensus 322 ~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~-~~~~D~vi~DPP---R~Gl~~~v~~~l~~~~~~ 397 (457)
..+|.-||-++...+..+.-++..+ ..+. ...+..+.+... ...+|+||+|-- ..|+ ++++.++...+.
T Consensus 7 ~~~ilivdd~~~~~~~l~~~L~~~g----~~v~-~~~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~--~~~~~l~~~~~~ 79 (130)
T 3eod_A 7 GKQILIVEDEQVFRSLLDSWFSSLG----ATTV-LAADGVDALELLGGFTPDLMICDIAMPRMNGL--KLLEHIRNRGDQ 79 (130)
T ss_dssp TCEEEEECSCHHHHHHHHHHHHHTT----CEEE-EESCHHHHHHHHTTCCCSEEEECCC-----CH--HHHHHHHHTTCC
T ss_pred CCeEEEEeCCHHHHHHHHHHHHhCC----ceEE-EeCCHHHHHHHHhcCCCCEEEEecCCCCCCHH--HHHHHHHhcCCC
Confidence 3589999999998888887777632 1232 233433332222 246999999953 3343 578888876545
Q ss_pred CcEEEEe
Q 044572 398 ERKAKSL 404 (457)
Q Consensus 398 ~~ivyvs 404 (457)
-.++.++
T Consensus 80 ~~ii~~t 86 (130)
T 3eod_A 80 TPVLVIS 86 (130)
T ss_dssp CCEEEEE
T ss_pred CCEEEEE
Confidence 5666665
No 436
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=49.62 E-value=23 Score=34.23 Aligned_cols=94 Identities=17% Similarity=0.051 Sum_probs=54.7
Q ss_pred CCCCeEEEEcc--cccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcc---ccc--C
Q 044572 297 PYGASVTDLYA--GAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPL---SWL--V 369 (457)
Q Consensus 297 ~~~~~vLDl~c--G~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~---~~~--~ 369 (457)
.++++||-.|+ |.|...+.+++..|+ +|++++.+++.++.+++ ++ .+ ..+..+-.+... +.. .
T Consensus 169 ~~g~~vlV~GasggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~----~g---a~--~~~d~~~~~~~~~~~~~~~~~ 238 (351)
T 1yb5_A 169 KAGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQ----NG---AH--EVFNHREVNYIDKIKKYVGEK 238 (351)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH----TT---CS--EEEETTSTTHHHHHHHHHCTT
T ss_pred CCcCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHH----cC---CC--EEEeCCCchHHHHHHHHcCCC
Confidence 47889998885 667777777776665 89999999988776543 21 12 222222111111 111 2
Q ss_pred CccEEEECCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 370 GSDVLVVDPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 370 ~~D~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
.+|+||-.- |- ..+...+..+++.++++.+.
T Consensus 239 ~~D~vi~~~---G~-~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 239 GIDIIIEML---AN-VNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp CEEEEEESC---HH-HHHHHHHHHEEEEEEEEECC
T ss_pred CcEEEEECC---Ch-HHHHHHHHhccCCCEEEEEe
Confidence 689887543 22 23445555565556666653
No 437
>1yf3_A DNA adenine methylase; T4DAM, methyltransferase, transferase-DNA complex; HET: DNA SAH; 2.29A {Enterobacteria phage T4} SCOP: c.66.1.28 PDB: 1yfj_A* 1yfl_A* 1q0s_A* 1q0t_A*
Probab=49.37 E-value=20 Score=33.48 Aligned_cols=51 Identities=20% Similarity=0.219 Sum_probs=33.8
Q ss_pred CcEEEEEccCCcCcccccCCccEEEECCCCCCc------------cHHHHHHHHhcCCCCcEEEEe
Q 044572 351 GNISWHNADNSIEPLSWLVGSDVLVVDPPRKGL------------DSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 351 ~nv~~~~~d~~~~~~~~~~~~D~vi~DPPR~Gl------------~~~v~~~l~~~~~~~~ivyvs 404 (457)
.++++.++|..+.+ ...-|+|.+|||+.+. +.++.+.+..+...+.-+.+|
T Consensus 148 ~~v~i~~~Df~~~i---~~~~~fvY~DPPY~~~~~~Y~~~f~~~d~~~L~~~l~~l~~~g~~~~lS 210 (259)
T 1yf3_A 148 DKIIFSSLHFKDVK---ILDGDFVYVDPPYLITVADYNKFWSEDEEKDLLNLLDSLNDRGIKFGLS 210 (259)
T ss_dssp GGEEEECCCGGGCC---CCTTEEEEECCCCTTSCCGGGGGCCHHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred cCCEEEcCCHHHHh---CCCCeEEEECCCCCCccchhccCCCHHHHHHHHHHHHHHhhCCCEEEEE
Confidence 36899999998876 2345899999998541 124666666664233445554
No 438
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=48.47 E-value=63 Score=29.49 Aligned_cols=76 Identities=20% Similarity=0.185 Sum_probs=51.3
Q ss_pred CCCeEEEEcccccHHHHHHHhh---CCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcc--c------
Q 044572 298 YGASVTDLYAGAGVIGLSLAAA---RKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPL--S------ 366 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~---~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~--~------ 366 (457)
.++++| +-.|+|.+|..+|+. .| .+|+.++.+++.++.+.+.++.. ...++.++.+|+.+... .
T Consensus 9 ~~k~vl-VTGas~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~ 83 (262)
T 3pk0_A 9 QGRSVV-VTGGTKGIGRGIATVFARAG-ANVAVAGRSTADIDACVADLDQL---GSGKVIGVQTDVSDRAQCDALAGRAV 83 (262)
T ss_dssp TTCEEE-ETTCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHTT---SSSCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCEEE-EECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhh---CCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 356666 555667777766653 33 38999999999888777766542 22478999999976311 1
Q ss_pred -ccCCccEEEECC
Q 044572 367 -WLVGSDVLVVDP 378 (457)
Q Consensus 367 -~~~~~D~vi~DP 378 (457)
..++.|++|.+-
T Consensus 84 ~~~g~id~lvnnA 96 (262)
T 3pk0_A 84 EEFGGIDVVCANA 96 (262)
T ss_dssp HHHSCCSEEEECC
T ss_pred HHhCCCCEEEECC
Confidence 124789998865
No 439
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=48.42 E-value=23 Score=33.57 Aligned_cols=102 Identities=11% Similarity=0.066 Sum_probs=58.3
Q ss_pred CCCeEEEEcccccHHHHHHHhh---CC-CCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCc--ccccC--
Q 044572 298 YGASVTDLYAGAGVIGLSLAAA---RK-CRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEP--LSWLV-- 369 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~---~~-~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~--~~~~~-- 369 (457)
.+++|| +-.|+|.+|..++.. .| .-+|++++.....-. ..+++.. ....+++++.+|+.+.. .....
T Consensus 23 ~~~~vl-VtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~--~~~l~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~~ 97 (346)
T 4egb_A 23 NAMNIL-VTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGN--LNNVKSI--QDHPNYYFVKGEIQNGELLEHVIKER 97 (346)
T ss_dssp -CEEEE-EETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCC--GGGGTTT--TTCTTEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCeEE-EECCccHHHHHHHHHHHhhCCCcEEEEEeccccccc--hhhhhhh--ccCCCeEEEEcCCCCHHHHHHHHhhc
Confidence 356777 667889999887753 12 247899987642111 1122211 12257999999987631 11122
Q ss_pred CccEEEECCCCCCc-----------------cHHHHHHHHhcCCCCcEEEEec
Q 044572 370 GSDVLVVDPPRKGL-----------------DSSLVHALQSIGSAERKAKSLS 405 (457)
Q Consensus 370 ~~D~vi~DPPR~Gl-----------------~~~v~~~l~~~~~~~~ivyvs~ 405 (457)
.+|+||.---.... ...+++++.+.. .+++||+||
T Consensus 98 ~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~v~~SS 149 (346)
T 4egb_A 98 DVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYP-HIKLVQVST 149 (346)
T ss_dssp TCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHST-TSEEEEEEE
T ss_pred CCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEeCc
Confidence 48988853221110 124566666664 788999985
No 440
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=48.11 E-value=77 Score=28.44 Aligned_cols=76 Identities=22% Similarity=0.154 Sum_probs=51.5
Q ss_pred CCCeEEEEcccccHHHHHHHhh---CCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcc--cc-----
Q 044572 298 YGASVTDLYAGAGVIGLSLAAA---RKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPL--SW----- 367 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~---~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~--~~----- 367 (457)
.++++|= -.|+|.+|..+|+. .| .+|+.++.+++.++.+.+.++.. ..++.++.+|+.+... ..
T Consensus 8 ~~k~vlI-TGas~giG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~ 81 (253)
T 3qiv_A 8 ENKVGIV-TGSGGGIGQAYAEALAREG-AAVVVADINAEAAEAVAKQIVAD----GGTAISVAVDVSDPESAKAMADRTL 81 (253)
T ss_dssp TTCEEEE-ETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHT----TCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCEEEE-ECCCChHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHHHHHhc----CCcEEEEEccCCCHHHHHHHHHHHH
Confidence 4666774 44567777666653 33 47999999999988877776652 2478899999976311 11
Q ss_pred --cCCccEEEECCC
Q 044572 368 --LVGSDVLVVDPP 379 (457)
Q Consensus 368 --~~~~D~vi~DPP 379 (457)
.+..|++|.+.-
T Consensus 82 ~~~g~id~li~~Ag 95 (253)
T 3qiv_A 82 AEFGGIDYLVNNAA 95 (253)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 147899998763
No 441
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=47.73 E-value=22 Score=34.42 Aligned_cols=94 Identities=16% Similarity=0.016 Sum_probs=54.6
Q ss_pred CCCCeEEEEc--ccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCccc---c-cCC
Q 044572 297 PYGASVTDLY--AGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLS---W-LVG 370 (457)
Q Consensus 297 ~~~~~vLDl~--cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~---~-~~~ 370 (457)
.+|++||=.+ +|.|..++.+|+..|+ +|++++.+++-++.+++. + .+ ..+..+-.+.... . ...
T Consensus 166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~l----G---a~--~~~~~~~~~~~~~~~~~~~~g 235 (353)
T 4dup_A 166 TEGESVLIHGGTSGIGTTAIQLARAFGA-EVYATAGSTGKCEACERL----G---AK--RGINYRSEDFAAVIKAETGQG 235 (353)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHH----T---CS--EEEETTTSCHHHHHHHHHSSC
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhc----C---CC--EEEeCCchHHHHHHHHHhCCC
Confidence 4688998663 3566677777776776 799999999988877652 1 11 2232222221111 1 236
Q ss_pred ccEEEECCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 371 SDVLVVDPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 371 ~D~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
+|+||-.- |- ..+...+..+++.++++.+.
T Consensus 236 ~Dvvid~~---g~-~~~~~~~~~l~~~G~iv~~g 265 (353)
T 4dup_A 236 VDIILDMI---GA-AYFERNIASLAKDGCLSIIA 265 (353)
T ss_dssp EEEEEESC---CG-GGHHHHHHTEEEEEEEEECC
T ss_pred ceEEEECC---CH-HHHHHHHHHhccCCEEEEEE
Confidence 89877533 22 23445555666556666664
No 442
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=47.63 E-value=51 Score=31.02 Aligned_cols=101 Identities=16% Similarity=0.180 Sum_probs=55.5
Q ss_pred CCeEEEEcccccHHHHHHHhh---CCCCEEEEEeCCHHHHHHHH--HHHhhCCCCCCCcEEEEEccCCcC--cccccCCc
Q 044572 299 GASVTDLYAGAGVIGLSLAAA---RKCRSVKCVEINKESQLSFE--KTVSRLPKSVDGNISWHNADNSIE--PLSWLVGS 371 (457)
Q Consensus 299 ~~~vLDl~cG~G~~sl~lA~~---~~~~~V~gVE~~~~av~~A~--~Na~~~~~~~~~nv~~~~~d~~~~--~~~~~~~~ 371 (457)
+++|| +-.|+|.+|.++++. .| -+|+++..+++..+... .++.. ..+++++.+|+.+. +.......
T Consensus 9 ~~~vl-VTGatGfIG~~l~~~Ll~~G-~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~~~~~~~~~ 81 (338)
T 2rh8_A 9 KKTAC-VVGGTGFVASLLVKLLLQKG-YAVNTTVRDPDNQKKVSHLLELQE-----LGDLKIFRADLTDELSFEAPIAGC 81 (338)
T ss_dssp CCEEE-EECTTSHHHHHHHHHHHHTT-CEEEEEESCTTCTTTTHHHHHHGG-----GSCEEEEECCTTTSSSSHHHHTTC
T ss_pred CCEEE-EECCchHHHHHHHHHHHHCC-CEEEEEEcCcchhhhHHHHHhcCC-----CCcEEEEecCCCChHHHHHHHcCC
Confidence 46677 666899999888753 23 47888776654221111 12211 13688999998763 22223567
Q ss_pred cEEEECC---------CCC-CccH------HHHHHHHhcCCCCcEEEEecc
Q 044572 372 DVLVVDP---------PRK-GLDS------SLVHALQSIGSAERKAKSLSE 406 (457)
Q Consensus 372 D~vi~DP---------PR~-Gl~~------~v~~~l~~~~~~~~ivyvs~~ 406 (457)
|+||..- |.. -... .+++++.+....+++||+||.
T Consensus 82 D~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~ 132 (338)
T 2rh8_A 82 DFVFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSA 132 (338)
T ss_dssp SEEEEESSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCH
T ss_pred CEEEEeCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecH
Confidence 8887521 100 1111 234444444236899999853
No 443
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=47.40 E-value=70 Score=28.88 Aligned_cols=72 Identities=19% Similarity=0.192 Sum_probs=43.6
Q ss_pred CCeEEEEcccccHHHHHHHhh---CCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCc--ccc------
Q 044572 299 GASVTDLYAGAGVIGLSLAAA---RKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEP--LSW------ 367 (457)
Q Consensus 299 ~~~vLDl~cG~G~~sl~lA~~---~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~--~~~------ 367 (457)
++++| +-.|+|.+|..+++. .| .+|+.++.+++ +...+.++.. ..++.++.+|+.+.. ...
T Consensus 4 ~k~vl-VTGas~giG~~ia~~l~~~G-~~V~~~~r~~~--~~~~~~l~~~----~~~~~~~~~D~~~~~~v~~~~~~~~~ 75 (255)
T 2q2v_A 4 GKTAL-VTGSTSGIGLGIAQVLARAG-ANIVLNGFGDP--APALAEIARH----GVKAVHHPADLSDVAQIEALFALAER 75 (255)
T ss_dssp TCEEE-ESSCSSHHHHHHHHHHHHTT-CEEEEECSSCC--HHHHHHHHTT----SCCEEEECCCTTSHHHHHHHHHHHHH
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHCC-CEEEEEeCCch--HHHHHHHHhc----CCceEEEeCCCCCHHHHHHHHHHHHH
Confidence 45565 556677777777653 33 37999998865 2223333321 146788899987631 111
Q ss_pred -cCCccEEEECC
Q 044572 368 -LVGSDVLVVDP 378 (457)
Q Consensus 368 -~~~~D~vi~DP 378 (457)
.+..|++|.+-
T Consensus 76 ~~g~id~lv~~A 87 (255)
T 2q2v_A 76 EFGGVDILVNNA 87 (255)
T ss_dssp HHSSCSEEEECC
T ss_pred HcCCCCEEEECC
Confidence 13689998864
No 444
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=47.39 E-value=44 Score=31.01 Aligned_cols=75 Identities=16% Similarity=0.034 Sum_probs=48.9
Q ss_pred CCCeEEEEcccccHHHHHHHhh---CCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcc---------
Q 044572 298 YGASVTDLYAGAGVIGLSLAAA---RKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPL--------- 365 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~---~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~--------- 365 (457)
+|+++|==| |++.+|...|+. .| .+|+..|.+++.++.+.+.++..+ .++.++.+|+.+...
T Consensus 8 ~gKvalVTG-as~GIG~aia~~la~~G-a~Vvi~~~~~~~~~~~~~~l~~~g----~~~~~~~~Dv~~~~~v~~~~~~~~ 81 (255)
T 4g81_D 8 TGKTALVTG-SARGLGFAYAEGLAAAG-ARVILNDIRATLLAESVDTLTRKG----YDAHGVAFDVTDELAIEAAFSKLD 81 (255)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTT-CEEEECCSCHHHHHHHHHHHHHTT----CCEEECCCCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcC----CcEEEEEeeCCCHHHHHHHHHHHH
Confidence 467777444 445555444432 33 489999999999888777766531 468899999876311
Q ss_pred cccCCccEEEECC
Q 044572 366 SWLVGSDVLVVDP 378 (457)
Q Consensus 366 ~~~~~~D~vi~DP 378 (457)
+..++.|++|-+-
T Consensus 82 ~~~G~iDiLVNNA 94 (255)
T 4g81_D 82 AEGIHVDILINNA 94 (255)
T ss_dssp HTTCCCCEEEECC
T ss_pred HHCCCCcEEEECC
Confidence 1125689988764
No 445
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=47.13 E-value=24 Score=34.09 Aligned_cols=97 Identities=12% Similarity=0.023 Sum_probs=55.5
Q ss_pred CCCC--CeEEEEcc--cccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcC---ccccc
Q 044572 296 VPYG--ASVTDLYA--GAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIE---PLSWL 368 (457)
Q Consensus 296 ~~~~--~~vLDl~c--G~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~---~~~~~ 368 (457)
+.+| ++||-.|+ |.|...+.+++..|+++|++++.+++.++.+++. ++ .+ ..+..+-.+. +.+..
T Consensus 156 ~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~---~g---~~--~~~d~~~~~~~~~~~~~~ 227 (357)
T 2zb4_A 156 ITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSE---LG---FD--AAINYKKDNVAEQLRESC 227 (357)
T ss_dssp CCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT---SC---CS--EEEETTTSCHHHHHHHHC
T ss_pred CCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH---cC---Cc--eEEecCchHHHHHHHHhc
Confidence 3468 89998775 5666666677666766999999998877766542 21 11 1222111111 11111
Q ss_pred -CCccEEEECCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 369 -VGSDVLVVDPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 369 -~~~D~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
..+|+||-.- |- ..+...+..+++.++++.+.
T Consensus 228 ~~~~d~vi~~~---G~-~~~~~~~~~l~~~G~iv~~G 260 (357)
T 2zb4_A 228 PAGVDVYFDNV---GG-NISDTVISQMNENSHIILCG 260 (357)
T ss_dssp TTCEEEEEESC---CH-HHHHHHHHTEEEEEEEEECC
T ss_pred CCCCCEEEECC---CH-HHHHHHHHHhccCcEEEEEC
Confidence 2588887643 32 33445555565566776664
No 446
>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}
Probab=46.98 E-value=75 Score=32.14 Aligned_cols=105 Identities=12% Similarity=0.073 Sum_probs=61.6
Q ss_pred CeEEEEcccccHHHHHHHhhCC--CCEEEEEeCCHH---HHHHHHHHHhhCC-----CCCCCcEEEEEccCCcCc-cccc
Q 044572 300 ASVTDLYAGAGVIGLSLAAARK--CRSVKCVEINKE---SQLSFEKTVSRLP-----KSVDGNISWHNADNSIEP-LSWL 368 (457)
Q Consensus 300 ~~vLDl~cG~G~~sl~lA~~~~--~~~V~gVE~~~~---av~~A~~Na~~~~-----~~~~~nv~~~~~d~~~~~-~~~~ 368 (457)
++|| +-.|+|.+|..+++... ..+|++++.++. +.+...++++... .....+++++.+|+.+.. ....
T Consensus 151 ~~VL-VTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~ 229 (508)
T 4f6l_B 151 GNTL-LTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVVLP 229 (508)
T ss_dssp EEEE-ESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCCCS
T ss_pred CeEE-EECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCCCc
Confidence 3455 77789999999987531 247999988766 3433333332100 001257999999998621 1133
Q ss_pred CCccEEEECC--------CCCCcc------HHHHHHHHhcCCCCcEEEEeccC
Q 044572 369 VGSDVLVVDP--------PRKGLD------SSLVHALQSIGSAERKAKSLSES 407 (457)
Q Consensus 369 ~~~D~vi~DP--------PR~Gl~------~~v~~~l~~~~~~~~ivyvs~~~ 407 (457)
..+|+||..- +..-.. ..+++++.. ..++++|+|+.+
T Consensus 230 ~~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~--~~~~~v~iSS~~ 280 (508)
T 4f6l_B 230 ENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ--HHARLIYVSTIS 280 (508)
T ss_dssp SCCSEEEECCCC--------CCHHHHHHHHHHHHHHHHT--TTCEEEEEEESC
T ss_pred cCCCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHh--CCCcEEEeCChh
Confidence 5789888532 211111 234555555 368999998644
No 447
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=46.84 E-value=75 Score=28.99 Aligned_cols=75 Identities=16% Similarity=0.061 Sum_probs=45.7
Q ss_pred CCCeEEEEcccccHHHHHHHhh---CCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCc--ccc-----
Q 044572 298 YGASVTDLYAGAGVIGLSLAAA---RKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEP--LSW----- 367 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~---~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~--~~~----- 367 (457)
.++++| +-.|+|.+|..+++. .| .+|+.++.+++..+...+.++.. ..++.++.+|+.+.. ...
T Consensus 33 ~~k~vl-ITGasggIG~~la~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~~ 106 (279)
T 3ctm_A 33 KGKVAS-VTGSSGGIGWAVAEAYAQAG-ADVAIWYNSHPADEKAEHLQKTY----GVHSKAYKCNISDPKSVEETISQQE 106 (279)
T ss_dssp TTCEEE-ETTTTSSHHHHHHHHHHHHT-CEEEEEESSSCCHHHHHHHHHHH----CSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEE-EECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhc----CCcceEEEeecCCHHHHHHHHHHHH
Confidence 356666 555677777766642 23 37999998876555444433321 146889999987631 111
Q ss_pred --cCCccEEEECC
Q 044572 368 --LVGSDVLVVDP 378 (457)
Q Consensus 368 --~~~~D~vi~DP 378 (457)
.+..|+||.+-
T Consensus 107 ~~~g~id~li~~A 119 (279)
T 3ctm_A 107 KDFGTIDVFVANA 119 (279)
T ss_dssp HHHSCCSEEEECG
T ss_pred HHhCCCCEEEECC
Confidence 13589998863
No 448
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=46.77 E-value=79 Score=24.60 Aligned_cols=77 Identities=6% Similarity=0.007 Sum_probs=49.1
Q ss_pred EEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccc-cCCccEEEECCCCCCcc-HHHHHHHHhcCCCCcEE
Q 044572 324 SVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSW-LVGSDVLVVDPPRKGLD-SSLVHALQSIGSAERKA 401 (457)
Q Consensus 324 ~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~-~~~~D~vi~DPPR~Gl~-~~v~~~l~~~~~~~~iv 401 (457)
+|.-||-++...+..+.-++.. + -.+.....+..+.+... ...+|+||+|---.+.+ -++++.++...+.-.++
T Consensus 3 ~ilivdd~~~~~~~l~~~L~~~---g-~~v~~~~~~~~~a~~~~~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii 78 (134)
T 3f6c_A 3 NAIIIDDHPLAIAAIRNLLIKN---D-IEILAELTEGGSAVQRVETLKPDIVIIDVDIPGVNGIQVLETLRKRQYSGIII 78 (134)
T ss_dssp EEEEECCCHHHHHHHHHHHHHT---T-EEEEEEESSSTTHHHHHHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCCSEEE
T ss_pred EEEEEcCCHHHHHHHHHHHhhC---C-cEEEEEcCCHHHHHHHHHhcCCCEEEEecCCCCCChHHHHHHHHhcCCCCeEE
Confidence 6889999999988888877762 1 12222344544433222 24699999997544433 36788888766555677
Q ss_pred EEe
Q 044572 402 KSL 404 (457)
Q Consensus 402 yvs 404 (457)
.++
T Consensus 79 ~~s 81 (134)
T 3f6c_A 79 IVS 81 (134)
T ss_dssp EEE
T ss_pred EEe
Confidence 776
No 449
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=46.50 E-value=71 Score=30.07 Aligned_cols=97 Identities=14% Similarity=0.091 Sum_probs=55.5
Q ss_pred CeEEEEcccccHHHHHHHhh---CCCCEEEEEeCCH----------HHHHHHHHHHhhCCCCCCCcEEEEEccCCcC--c
Q 044572 300 ASVTDLYAGAGVIGLSLAAA---RKCRSVKCVEINK----------ESQLSFEKTVSRLPKSVDGNISWHNADNSIE--P 364 (457)
Q Consensus 300 ~~vLDl~cG~G~~sl~lA~~---~~~~~V~gVE~~~----------~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~--~ 364 (457)
++|| +-.|+|.+|..+++. .| .+|++++.+. +.++..+.. . ..+++++.+|+.+. +
T Consensus 3 ~~vl-VtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~r~~~~~~~~~~~l~~~--~-----~~~~~~~~~D~~~~~~~ 73 (348)
T 1ek6_A 3 EKVL-VTGGAGYIGSHTVLELLEAG-YLPVVIDNFHNAFRGGGSLPESLRRVQEL--T-----GRSVEFEEMDILDQGAL 73 (348)
T ss_dssp SEEE-EETTTSHHHHHHHHHHHHTT-CCEEEEECSSSSCBCSSSSBHHHHHHHHH--H-----TCCCEEEECCTTCHHHH
T ss_pred CEEE-EECCCCHHHHHHHHHHHHCC-CEEEEEecCCcccccccccHHHHHHHHhc--c-----CCceEEEECCCCCHHHH
Confidence 3455 556789998887753 23 4799998642 233222211 1 13578999998763 1
Q ss_pred ccccC--CccEEEECCCCCCcc-----------------HHHHHHHHhcCCCCcEEEEecc
Q 044572 365 LSWLV--GSDVLVVDPPRKGLD-----------------SSLVHALQSIGSAERKAKSLSE 406 (457)
Q Consensus 365 ~~~~~--~~D~vi~DPPR~Gl~-----------------~~v~~~l~~~~~~~~ivyvs~~ 406 (457)
..... .+|+||..-...... ..+++++.+.. .+++||+||.
T Consensus 74 ~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~ 133 (348)
T 1ek6_A 74 QRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHG-VKNLVFSSSA 133 (348)
T ss_dssp HHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEG
T ss_pred HHHHHhcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhC-CCEEEEECcH
Confidence 12222 689998765432211 12444554443 6899999864
No 450
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=46.19 E-value=20 Score=34.05 Aligned_cols=98 Identities=11% Similarity=0.060 Sum_probs=58.9
Q ss_pred CCCeEEEEcccccHHHHHHHhh---CCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcC--cccccC--C
Q 044572 298 YGASVTDLYAGAGVIGLSLAAA---RKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIE--PLSWLV--G 370 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~---~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~--~~~~~~--~ 370 (457)
.+++|| +-.|+|.+|..+++. .| .+|++++.+..... +.. ....+++++.+|+.+. +..... .
T Consensus 19 ~~~~vl-VTGasG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~------~~~--~~l~~v~~~~~Dl~d~~~~~~~~~~~~ 88 (330)
T 2pzm_A 19 SHMRIL-ITGGAGCLGSNLIEHWLPQG-HEILVIDNFATGKR------EVL--PPVAGLSVIEGSVTDAGLLERAFDSFK 88 (330)
T ss_dssp TCCEEE-EETTTSHHHHHHHHHHGGGT-CEEEEEECCSSSCG------GGS--CSCTTEEEEECCTTCHHHHHHHHHHHC
T ss_pred CCCEEE-EECCCCHHHHHHHHHHHHCC-CEEEEEECCCccch------hhh--hccCCceEEEeeCCCHHHHHHHHhhcC
Confidence 356777 556788888887753 22 48999998643211 010 1114789999998763 122233 7
Q ss_pred ccEEEECCCCCCc--------------cHHHHHHHHhcCCCCcEEEEecc
Q 044572 371 SDVLVVDPPRKGL--------------DSSLVHALQSIGSAERKAKSLSE 406 (457)
Q Consensus 371 ~D~vi~DPPR~Gl--------------~~~v~~~l~~~~~~~~ivyvs~~ 406 (457)
+|+||..-..... ...+++++.+.. .+++||+||.
T Consensus 89 ~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~-~~~iV~~SS~ 137 (330)
T 2pzm_A 89 PTHVVHSAAAYKDPDDWAEDAATNVQGSINVAKAASKAG-VKRLLNFQTA 137 (330)
T ss_dssp CSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHHT-CSEEEEEEEG
T ss_pred CCEEEECCccCCCccccChhHHHHHHHHHHHHHHHHHcC-CCEEEEecCH
Confidence 8999876543221 113455555554 6899999864
No 451
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=46.01 E-value=20 Score=34.09 Aligned_cols=94 Identities=12% Similarity=-0.096 Sum_probs=54.5
Q ss_pred CCCCeEEEEc--ccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCc---ccc--cC
Q 044572 297 PYGASVTDLY--AGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEP---LSW--LV 369 (457)
Q Consensus 297 ~~~~~vLDl~--cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~---~~~--~~ 369 (457)
.++++||-.| +|.|...+.+++..|+ +|++++.+++.++.+++. + .+ ..+..+-.+.. .+. ..
T Consensus 139 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~----g---~~--~~~~~~~~~~~~~~~~~~~~~ 208 (327)
T 1qor_A 139 KPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKA----G---AW--QVINYREEDLVERLKEITGGK 208 (327)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHH----T---CS--EEEETTTSCHHHHHHHHTTTC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHc----C---CC--EEEECCCccHHHHHHHHhCCC
Confidence 4688999877 4566666666665565 899999999888777641 1 11 12221111111 111 13
Q ss_pred CccEEEECCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 370 GSDVLVVDPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 370 ~~D~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
.+|+||-.- | ...+...+..+++.++++.+.
T Consensus 209 ~~D~vi~~~---g-~~~~~~~~~~l~~~G~iv~~g 239 (327)
T 1qor_A 209 KVRVVYDSV---G-RDTWERSLDCLQRRGLMVSFG 239 (327)
T ss_dssp CEEEEEECS---C-GGGHHHHHHTEEEEEEEEECC
T ss_pred CceEEEECC---c-hHHHHHHHHHhcCCCEEEEEe
Confidence 589888653 3 233445555565556777664
No 452
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=45.95 E-value=25 Score=34.06 Aligned_cols=94 Identities=12% Similarity=0.001 Sum_probs=54.0
Q ss_pred CCCCeEEEEc--ccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcC---ccccc--C
Q 044572 297 PYGASVTDLY--AGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIE---PLSWL--V 369 (457)
Q Consensus 297 ~~~~~vLDl~--cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~---~~~~~--~ 369 (457)
.+|++||-.| +|.|...+.+++..|+ +|++++.+++.++.+++ . + .+ ..+..+-.+. +.+.. .
T Consensus 161 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~-~---g---~~--~~~~~~~~~~~~~~~~~~~~~ 230 (354)
T 2j8z_A 161 QAGDYVLIHAGLSGVGTAAIQLTRMAGA-IPLVTAGSQKKLQMAEK-L---G---AA--AGFNYKKEDFSEATLKFTKGA 230 (354)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHH-H---T---CS--EEEETTTSCHHHHHHHHTTTS
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH-c---C---Cc--EEEecCChHHHHHHHHHhcCC
Confidence 4688999776 3566666667766665 89999999998887743 1 1 11 1222221111 11111 3
Q ss_pred CccEEEECCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 370 GSDVLVVDPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 370 ~~D~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
.+|++|-.-. -. .+...+..+++.++++.+.
T Consensus 231 ~~d~vi~~~G---~~-~~~~~~~~l~~~G~iv~~G 261 (354)
T 2j8z_A 231 GVNLILDCIG---GS-YWEKNVNCLALDGRWVLYG 261 (354)
T ss_dssp CEEEEEESSC---GG-GHHHHHHHEEEEEEEEECC
T ss_pred CceEEEECCC---ch-HHHHHHHhccCCCEEEEEe
Confidence 5898876432 22 3445555565566776664
No 453
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=45.71 E-value=20 Score=34.79 Aligned_cols=94 Identities=12% Similarity=0.081 Sum_probs=52.5
Q ss_pred CeEEEEcc-cccHHH-HHHH-hhCCCCEEEEEeCCHH---HHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccE
Q 044572 300 ASVTDLYA-GAGVIG-LSLA-AARKCRSVKCVEINKE---SQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDV 373 (457)
Q Consensus 300 ~~vLDl~c-G~G~~s-l~lA-~~~~~~~V~gVE~~~~---av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~ 373 (457)
++||=.|+ |+|.++ +.+| +..|+++|++++.+++ -.+.+++ ++ .+.+.+...|..+ +.+..+.+|+
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~----lG---a~~v~~~~~~~~~-i~~~~gg~Dv 245 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEE----LD---ATYVDSRQTPVED-VPDVYEQMDF 245 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHH----TT---CEEEETTTSCGGG-HHHHSCCEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHH----cC---CcccCCCccCHHH-HHHhCCCCCE
Confidence 89998886 346666 7777 7667767999999987 7776653 22 1211000011111 2121136888
Q ss_pred EEECCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 374 LVVDPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 374 vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
||- . .|-...+...+..+++.++++.+.
T Consensus 246 vid-~--~g~~~~~~~~~~~l~~~G~iv~~g 273 (357)
T 2b5w_A 246 IYE-A--TGFPKHAIQSVQALAPNGVGALLG 273 (357)
T ss_dssp EEE-C--SCCHHHHHHHHHHEEEEEEEEECC
T ss_pred EEE-C--CCChHHHHHHHHHHhcCCEEEEEe
Confidence 764 3 232223445555566556666664
No 454
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=45.58 E-value=67 Score=25.27 Aligned_cols=76 Identities=5% Similarity=-0.033 Sum_probs=47.8
Q ss_pred CEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccc-cCCccEEEECCC---CCCccHHHHHHHHhcCCCC
Q 044572 323 RSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSW-LVGSDVLVVDPP---RKGLDSSLVHALQSIGSAE 398 (457)
Q Consensus 323 ~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~-~~~~D~vi~DPP---R~Gl~~~v~~~l~~~~~~~ 398 (457)
.+|.-||-++...+..+.-++.. +.-.+. ...+..+.+... ...+|+||+|-- ..|+ ++++.++...+.-
T Consensus 15 ~~ilivdd~~~~~~~l~~~L~~~---g~~~v~-~~~~~~~a~~~l~~~~~dlvi~D~~l~~~~g~--~~~~~l~~~~~~~ 88 (135)
T 3snk_A 15 KQVALFSSDPNFKRDVATRLDAL---AIYDVR-VSETDDFLKGPPADTRPGIVILDLGGGDLLGK--PGIVEARALWATV 88 (135)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHT---SSEEEE-EECGGGGGGCCCTTCCCSEEEEEEETTGGGGS--TTHHHHHGGGTTC
T ss_pred cEEEEEcCCHHHHHHHHHHHhhc---CCeEEE-EeccHHHHHHHHhccCCCEEEEeCCCCCchHH--HHHHHHHhhCCCC
Confidence 48999999999988888777662 101232 344444433222 246999999853 3343 4777887765445
Q ss_pred cEEEEe
Q 044572 399 RKAKSL 404 (457)
Q Consensus 399 ~ivyvs 404 (457)
.++.++
T Consensus 89 ~ii~~s 94 (135)
T 3snk_A 89 PLIAVS 94 (135)
T ss_dssp CEEEEE
T ss_pred cEEEEe
Confidence 667766
No 455
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=45.44 E-value=29 Score=33.05 Aligned_cols=43 Identities=23% Similarity=0.082 Sum_probs=33.6
Q ss_pred CCCCeEEEEcc--cccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHH
Q 044572 297 PYGASVTDLYA--GAGVIGLSLAAARKCRSVKCVEINKESQLSFEK 340 (457)
Q Consensus 297 ~~~~~vLDl~c--G~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~ 340 (457)
.++++||-.|+ |.|...+.+++..|+ +|++++.+++.++.+++
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~ 188 (333)
T 1wly_A 144 KPGDYVLIHAAAGGMGHIMVPWARHLGA-TVIGTVSTEEKAETARK 188 (333)
T ss_dssp CTTCEEEETTTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH
Confidence 46889998873 677777777776665 89999999988877754
No 456
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=45.34 E-value=26 Score=33.47 Aligned_cols=101 Identities=16% Similarity=0.135 Sum_probs=59.8
Q ss_pred CCeEEEEcccccHHHHHHHhh---CCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCc--ccccC--Cc
Q 044572 299 GASVTDLYAGAGVIGLSLAAA---RKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEP--LSWLV--GS 371 (457)
Q Consensus 299 ~~~vLDl~cG~G~~sl~lA~~---~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~--~~~~~--~~ 371 (457)
+++|| +-.|+|.+|..+++. .| .+|++++.++.........+. ...+++++.+|+.+.. ..... .+
T Consensus 9 ~~~vl-VtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 81 (357)
T 1rkx_A 9 GKRVF-VTGHTGFKGGWLSLWLQTMG-ATVKGYSLTAPTVPSLFETAR-----VADGMQSEIGDIRDQNKLLESIREFQP 81 (357)
T ss_dssp TCEEE-EETTTSHHHHHHHHHHHHTT-CEEEEEESSCSSSSCHHHHTT-----TTTTSEEEECCTTCHHHHHHHHHHHCC
T ss_pred CCEEE-EECCCchHHHHHHHHHHhCC-CeEEEEeCCCcccchhhHhhc-----cCCceEEEEccccCHHHHHHHHHhcCC
Confidence 56777 566889999887753 23 489999987654322222211 1246789999987631 11112 47
Q ss_pred cEEEECCCCCCcc-----------------HHHHHHHHhcCCCCcEEEEecc
Q 044572 372 DVLVVDPPRKGLD-----------------SSLVHALQSIGSAERKAKSLSE 406 (457)
Q Consensus 372 D~vi~DPPR~Gl~-----------------~~v~~~l~~~~~~~~ivyvs~~ 406 (457)
|+||..-...... ..+++++......+++||+||.
T Consensus 82 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~ 133 (357)
T 1rkx_A 82 EIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSD 133 (357)
T ss_dssp SEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCG
T ss_pred CEEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCH
Confidence 9998764321110 1245555555336899999864
No 457
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=45.26 E-value=82 Score=28.55 Aligned_cols=76 Identities=17% Similarity=0.146 Sum_probs=50.7
Q ss_pred CCCeEEEEcccccHHHHHHHhh---CCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcc--c------
Q 044572 298 YGASVTDLYAGAGVIGLSLAAA---RKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPL--S------ 366 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~---~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~--~------ 366 (457)
.++++| +-.|+|.+|..+|+. .| .+|+.++.+.+..+.+.+.++.. ..++.++.+|+.+... .
T Consensus 11 ~~k~vl-VTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~ 84 (256)
T 3gaf_A 11 NDAVAI-VTGAAAGIGRAIAGTFAKAG-ASVVVTDLKSEGAEAVAAAIRQA----GGKAIGLECNVTDEQHREAVIKAAL 84 (256)
T ss_dssp TTCEEE-ECSCSSHHHHHHHHHHHHHT-CEEEEEESSHHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEE-EECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhc----CCcEEEEECCCCCHHHHHHHHHHHH
Confidence 466666 455566676666542 23 37999999999888777766652 2478999999976311 1
Q ss_pred -ccCCccEEEECCC
Q 044572 367 -WLVGSDVLVVDPP 379 (457)
Q Consensus 367 -~~~~~D~vi~DPP 379 (457)
..++.|++|.+--
T Consensus 85 ~~~g~id~lv~nAg 98 (256)
T 3gaf_A 85 DQFGKITVLVNNAG 98 (256)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 1147899988653
No 458
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=44.90 E-value=1.4e+02 Score=26.88 Aligned_cols=72 Identities=19% Similarity=0.193 Sum_probs=44.7
Q ss_pred CCeEEEEcccccHHHHHHHhh---CCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCc--ccc------
Q 044572 299 GASVTDLYAGAGVIGLSLAAA---RKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEP--LSW------ 367 (457)
Q Consensus 299 ~~~vLDl~cG~G~~sl~lA~~---~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~--~~~------ 367 (457)
++++|= -.|+|.+|..+++. .| .+|+.++.+++.++.+.+.+ ..++.++..|+.+.. ...
T Consensus 5 ~k~vlV-TGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~~~ 75 (254)
T 1hdc_A 5 GKTVII-TGGARGLGAEAARQAVAAG-ARVVLADVLDEEGAATAREL-------GDAARYQHLDVTIEEDWQRVVAYARE 75 (254)
T ss_dssp CSEEEE-ETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHTT-------GGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEE-ECCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHh-------CCceeEEEecCCCHHHHHHHHHHHHH
Confidence 566664 44567777666542 33 48999999987765443321 136788999987531 111
Q ss_pred -cCCccEEEECCC
Q 044572 368 -LVGSDVLVVDPP 379 (457)
Q Consensus 368 -~~~~D~vi~DPP 379 (457)
.+..|++|.+--
T Consensus 76 ~~g~iD~lv~nAg 88 (254)
T 1hdc_A 76 EFGSVDGLVNNAG 88 (254)
T ss_dssp HHSCCCEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 136899988753
No 459
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=44.73 E-value=12 Score=36.30 Aligned_cols=43 Identities=33% Similarity=0.405 Sum_probs=33.5
Q ss_pred eeeEEEEECCCCCCCCCHHHHHHHHHHHHhhCCCCCeEEEEcccc
Q 044572 265 VGGIDISLAPSSFGQANTRAFDILLRKLQKYVPYGASVTDLYAGA 309 (457)
Q Consensus 265 ~~g~~~~i~~~~FfQ~n~~~~~~l~~~i~~~~~~~~~vLDl~cG~ 309 (457)
+.| .+.+.|+||+. .....+..++.+.+++..|..|||+|+-+
T Consensus 30 vMG-IlNvTpDSFsd-~~~~~~~al~~A~~~v~~GAdIIDIGgeS 72 (314)
T 3tr9_A 30 VMG-IINVSPNSFYH-PHLDLNSALRTAEKMVDEGADILDIGGEA 72 (314)
T ss_dssp EEE-EEECSTTCSBC-BCCSHHHHHHHHHHHHHTTCSEEEEECCC
T ss_pred EEE-EEeCCCCchhh-ccCCHHHHHHHHHHHHHCCCCEEEECCCC
Confidence 456 78899999998 33345677788888878899999999843
No 460
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=44.44 E-value=61 Score=30.35 Aligned_cols=72 Identities=17% Similarity=0.016 Sum_probs=46.7
Q ss_pred CCCeEEEEcccccH---HHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcc---------
Q 044572 298 YGASVTDLYAGAGV---IGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPL--------- 365 (457)
Q Consensus 298 ~~~~vLDl~cG~G~---~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~--------- 365 (457)
+|+++|=-|++.|. ++..||+. | .+|+.+|.+++.++.+.+.+. .++.++.+|+.+...
T Consensus 28 ~gKvalVTGas~GIG~aiA~~la~~-G-a~V~i~~r~~~~l~~~~~~~g-------~~~~~~~~Dv~~~~~v~~~~~~~~ 98 (273)
T 4fgs_A 28 NAKIAVITGATSGIGLAAAKRFVAE-G-ARVFITGRRKDVLDAAIAEIG-------GGAVGIQADSANLAELDRLYEKVK 98 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHT-T-CEEEEEESCHHHHHHHHHHHC-------TTCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHC-C-CEEEEEECCHHHHHHHHHHcC-------CCeEEEEecCCCHHHHHHHHHHHH
Confidence 57887766665542 44445543 3 489999999998876654331 356788999876311
Q ss_pred cccCCccEEEECC
Q 044572 366 SWLVGSDVLVVDP 378 (457)
Q Consensus 366 ~~~~~~D~vi~DP 378 (457)
+..++.|++|-+-
T Consensus 99 ~~~G~iDiLVNNA 111 (273)
T 4fgs_A 99 AEAGRIDVLFVNA 111 (273)
T ss_dssp HHHSCEEEEEECC
T ss_pred HHcCCCCEEEECC
Confidence 1125689988765
No 461
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=44.02 E-value=1.2e+02 Score=24.20 Aligned_cols=78 Identities=9% Similarity=-0.053 Sum_probs=48.1
Q ss_pred CEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEE-EEccCCcCcccc-cCCccEEEECCCCCCcc-HHHHHHHHhcCCCCc
Q 044572 323 RSVKCVEINKESQLSFEKTVSRLPKSVDGNISW-HNADNSIEPLSW-LVGSDVLVVDPPRKGLD-SSLVHALQSIGSAER 399 (457)
Q Consensus 323 ~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~-~~~d~~~~~~~~-~~~~D~vi~DPPR~Gl~-~~v~~~l~~~~~~~~ 399 (457)
.+|.-||-++...+..+.-++..+ ....+ ...+..+.+... ...+|+||+|---.+.+ -++++.++...+.-.
T Consensus 21 ~~iLivdd~~~~~~~l~~~L~~~~----~~~~v~~~~~~~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ 96 (150)
T 4e7p_A 21 MKVLVAEDQSMLRDAMCQLLTLQP----DVESVLQAKNGQEAIQLLEKESVDIAILDVEMPVKTGLEVLEWIRSEKLETK 96 (150)
T ss_dssp EEEEEECSCHHHHHHHHHHHHTST----TEEEEEEESSHHHHHHHHTTSCCSEEEECSSCSSSCHHHHHHHHHHTTCSCE
T ss_pred cEEEEEcCCHHHHHHHHHHHHhCC----CcEEEEEECCHHHHHHHhhccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCe
Confidence 479999999998888877766421 11222 233433332222 24699999996533332 357888887655556
Q ss_pred EEEEe
Q 044572 400 KAKSL 404 (457)
Q Consensus 400 ivyvs 404 (457)
++.++
T Consensus 97 ii~ls 101 (150)
T 4e7p_A 97 VVVVT 101 (150)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 77776
No 462
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=43.99 E-value=89 Score=28.47 Aligned_cols=75 Identities=19% Similarity=0.156 Sum_probs=49.2
Q ss_pred CCeEEEEcccccHHHHHHHhh---CCCCEEEEEeC-CHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcC----cc--cc-
Q 044572 299 GASVTDLYAGAGVIGLSLAAA---RKCRSVKCVEI-NKESQLSFEKTVSRLPKSVDGNISWHNADNSIE----PL--SW- 367 (457)
Q Consensus 299 ~~~vLDl~cG~G~~sl~lA~~---~~~~~V~gVE~-~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~----~~--~~- 367 (457)
++++| +-.|+|.+|..+++. .| .+|+.++. +++.++.+.+.++.. ...++.++.+|+.+. .. ..
T Consensus 11 ~k~~l-VTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~ 85 (276)
T 1mxh_A 11 CPAAV-ITGGARRIGHSIAVRLHQQG-FRVVVHYRHSEGAAQRLVAELNAA---RAGSAVLCKGDLSLSSSLLDCCEDII 85 (276)
T ss_dssp CCEEE-ETTCSSHHHHHHHHHHHHTT-CEEEEEESSCHHHHHHHHHHHHHH---STTCEEEEECCCSSSTTHHHHHHHHH
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHCC-CEEEEEeCCChHHHHHHHHHHHHh---cCCceEEEeccCCCccccHHHHHHHH
Confidence 56666 666778888777653 23 48999999 888777665555431 013688999999865 21 11
Q ss_pred ------cCCccEEEECC
Q 044572 368 ------LVGSDVLVVDP 378 (457)
Q Consensus 368 ------~~~~D~vi~DP 378 (457)
.+..|++|.+-
T Consensus 86 ~~~~~~~g~id~lv~nA 102 (276)
T 1mxh_A 86 DCSFRAFGRCDVLVNNA 102 (276)
T ss_dssp HHHHHHHSCCCEEEECC
T ss_pred HHHHHhcCCCCEEEECC
Confidence 13689988764
No 463
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=43.76 E-value=88 Score=28.45 Aligned_cols=78 Identities=15% Similarity=0.014 Sum_probs=49.8
Q ss_pred CCCeEEEEcccccHHHHHHHhh---CCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcc--c------
Q 044572 298 YGASVTDLYAGAGVIGLSLAAA---RKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPL--S------ 366 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~---~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~--~------ 366 (457)
.++++|=-| |+|.+|..+|+. .| .+|+.++.+++.++.+.+.++.. ....++.++..|+.+... .
T Consensus 7 ~~k~~lVTG-as~GIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 82 (265)
T 3lf2_A 7 SEAVAVVTG-GSSGIGLATVELLLEAG-AAVAFCARDGERLRAAESALRQR--FPGARLFASVCDVLDALQVRAFAEACE 82 (265)
T ss_dssp TTCEEEEET-CSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHH--STTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCChHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHHh--cCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence 356666444 556666655542 33 37999999999888777665541 122458999999976311 1
Q ss_pred -ccCCccEEEECCC
Q 044572 367 -WLVGSDVLVVDPP 379 (457)
Q Consensus 367 -~~~~~D~vi~DPP 379 (457)
..+..|++|.+--
T Consensus 83 ~~~g~id~lvnnAg 96 (265)
T 3lf2_A 83 RTLGCASILVNNAG 96 (265)
T ss_dssp HHHCSCSEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 1246899988764
No 464
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=43.65 E-value=85 Score=28.03 Aligned_cols=73 Identities=16% Similarity=0.130 Sum_probs=48.6
Q ss_pred CCCeEEEEcccccHHHHHHHhh---CCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcc--c---ccC
Q 044572 298 YGASVTDLYAGAGVIGLSLAAA---RKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPL--S---WLV 369 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~---~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~--~---~~~ 369 (457)
++++|| +-.|+|.+|..+|+. .| .+|+.++.+++.++...+... .++.++..|+.+... . ...
T Consensus 13 ~~k~vl-VTGas~gIG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~~~-------~~~~~~~~D~~~~~~~~~~~~~~~ 83 (249)
T 3f9i_A 13 TGKTSL-ITGASSGIGSAIARLLHKLG-SKVIISGSNEEKLKSLGNALK-------DNYTIEVCNLANKEECSNLISKTS 83 (249)
T ss_dssp TTCEEE-ETTTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHC-------SSEEEEECCTTSHHHHHHHHHTCS
T ss_pred CCCEEE-EECCCChHHHHHHHHHHHCC-CEEEEEcCCHHHHHHHHHHhc-------cCccEEEcCCCCHHHHHHHHHhcC
Confidence 467777 556677777776653 23 489999999988776654432 367889999875311 1 124
Q ss_pred CccEEEECCC
Q 044572 370 GSDVLVVDPP 379 (457)
Q Consensus 370 ~~D~vi~DPP 379 (457)
..|++|.+.-
T Consensus 84 ~id~li~~Ag 93 (249)
T 3f9i_A 84 NLDILVCNAG 93 (249)
T ss_dssp CCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 6899887654
No 465
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=43.51 E-value=88 Score=28.00 Aligned_cols=75 Identities=16% Similarity=0.072 Sum_probs=50.0
Q ss_pred CCCeEEEEcccccHHHHHHHhh---CCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCc--ccc-----
Q 044572 298 YGASVTDLYAGAGVIGLSLAAA---RKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEP--LSW----- 367 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~---~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~--~~~----- 367 (457)
.++++| +-.|+|.+|..+++. .| .+|++++.+++..+...+.++.. ..++.++.+|+.+.. ...
T Consensus 12 ~~k~vl-ItGasggiG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (260)
T 3awd_A 12 DNRVAI-VTGGAQNIGLACVTALAEAG-ARVIIADLDEAMATKAVEDLRME----GHDVSSVVMDVTNTESVQNAVRSVH 85 (260)
T ss_dssp TTCEEE-EETTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEE-EeCCCchHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhc----CCceEEEEecCCCHHHHHHHHHHHH
Confidence 356676 556778888777653 23 48999999988776665555542 146899999987631 111
Q ss_pred --cCCccEEEECC
Q 044572 368 --LVGSDVLVVDP 378 (457)
Q Consensus 368 --~~~~D~vi~DP 378 (457)
.+..|+||.+-
T Consensus 86 ~~~~~id~vi~~A 98 (260)
T 3awd_A 86 EQEGRVDILVACA 98 (260)
T ss_dssp HHHSCCCEEEECC
T ss_pred HHcCCCCEEEECC
Confidence 13689998864
No 466
>3eqz_A Response regulator; structural genomics, unknown function, PSI-2, protein struct initiative; 2.15A {Colwellia psychrerythraea} SCOP: c.23.1.0
Probab=43.46 E-value=1.1e+02 Score=23.69 Aligned_cols=77 Identities=14% Similarity=0.057 Sum_probs=47.5
Q ss_pred CEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccccCCccEEEECCCCCCcc-HHHHHHHHhcCCCCcEE
Q 044572 323 RSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSWLVGSDVLVVDPPRKGLD-SSLVHALQSIGSAERKA 401 (457)
Q Consensus 323 ~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~~~~~D~vi~DPPR~Gl~-~~v~~~l~~~~~~~~iv 401 (457)
.+|.-||-++...+..+.-++.. ...+. ...+..+........+|+||+|---.+.+ -++++.++...+.-.++
T Consensus 4 ~~ilivdd~~~~~~~l~~~L~~~----~~~v~-~~~~~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii 78 (135)
T 3eqz_A 4 NRVFIVDDDTLTCNLLKTIVEPI----FGNVE-AFQHPRAFLTLSLNKQDIIILDLMMPDMDGIEVIRHLAEHKSPASLI 78 (135)
T ss_dssp CEEEEECSCHHHHHHHHHHHTTT----CSCEE-EESCHHHHTTSCCCTTEEEEEECCTTTTHHHHHHHHHHHTTCCCEEE
T ss_pred ceEEEEeCCHHHHHHHHHHHHhh----cceee-eecCHHHHHHhhccCCCEEEEeCCCCCCCHHHHHHHHHhCCCCCCEE
Confidence 37999999999988888777652 12232 22333222222222399999997544432 25778887766555677
Q ss_pred EEe
Q 044572 402 KSL 404 (457)
Q Consensus 402 yvs 404 (457)
.++
T Consensus 79 ~~s 81 (135)
T 3eqz_A 79 LIS 81 (135)
T ss_dssp EEE
T ss_pred EEE
Confidence 776
No 467
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=43.42 E-value=75 Score=28.80 Aligned_cols=75 Identities=16% Similarity=0.147 Sum_probs=50.4
Q ss_pred CCeEEEEcccccHHHHHHHhh---CCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCc--ccc------
Q 044572 299 GASVTDLYAGAGVIGLSLAAA---RKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEP--LSW------ 367 (457)
Q Consensus 299 ~~~vLDl~cG~G~~sl~lA~~---~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~--~~~------ 367 (457)
++++| +-.|+|.+|..+|+. .| .+|+.++.+++.++.+.+.++.. ..++.++.+|+.+.. ...
T Consensus 6 ~k~vl-VTGas~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~ 79 (257)
T 3imf_A 6 EKVVI-ITGGSSGMGKGMATRFAKEG-ARVVITGRTKEKLEEAKLEIEQF----PGQILTVQMDVRNTDDIQKMIEQIDE 79 (257)
T ss_dssp TCEEE-ETTTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHCCS----TTCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEE-EECCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhc----CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 55666 555667777766643 33 47999999999888777666542 247899999997631 111
Q ss_pred -cCCccEEEECCC
Q 044572 368 -LVGSDVLVVDPP 379 (457)
Q Consensus 368 -~~~~D~vi~DPP 379 (457)
.+..|++|.+--
T Consensus 80 ~~g~id~lv~nAg 92 (257)
T 3imf_A 80 KFGRIDILINNAA 92 (257)
T ss_dssp HHSCCCEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 146899988653
No 468
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=43.26 E-value=20 Score=34.46 Aligned_cols=95 Identities=12% Similarity=0.092 Sum_probs=59.0
Q ss_pred CCeEEEEcccccHHHHHHHhhC---CCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCC-cC--cccccCCcc
Q 044572 299 GASVTDLYAGAGVIGLSLAAAR---KCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNS-IE--PLSWLVGSD 372 (457)
Q Consensus 299 ~~~vLDl~cG~G~~sl~lA~~~---~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~-~~--~~~~~~~~D 372 (457)
+++|| +-.|+|.+|..+++.. +.-+|++++.++..+... . ...+++++.+|+. +. +......+|
T Consensus 24 ~~~vl-VtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~----~-----~~~~v~~~~~Dl~~d~~~~~~~~~~~d 93 (372)
T 3slg_A 24 AKKVL-ILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDL----V-----KHERMHFFEGDITINKEWVEYHVKKCD 93 (372)
T ss_dssp CCEEE-EESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGG----G-----GSTTEEEEECCTTTCHHHHHHHHHHCS
T ss_pred CCEEE-EECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhh----c-----cCCCeEEEeCccCCCHHHHHHHhccCC
Confidence 46777 6778999998887631 124899999986432211 1 1247899999997 42 112234689
Q ss_pred EEEECCCCC-----------------CccHHHHHHHHhcCCCCcEEEEec
Q 044572 373 VLVVDPPRK-----------------GLDSSLVHALQSIGSAERKAKSLS 405 (457)
Q Consensus 373 ~vi~DPPR~-----------------Gl~~~v~~~l~~~~~~~~ivyvs~ 405 (457)
+||.---.. .....+++++.+.. +++||+||
T Consensus 94 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~--~~~v~~SS 141 (372)
T 3slg_A 94 VILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG--KHLVFPST 141 (372)
T ss_dssp EEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT--CEEEEECC
T ss_pred EEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC--CcEEEeCc
Confidence 888521111 11134677776664 89999985
No 469
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=43.23 E-value=2e+02 Score=26.32 Aligned_cols=73 Identities=10% Similarity=-0.027 Sum_probs=45.9
Q ss_pred CeEEEEcccccHHHHHHHhh---CCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCc------c---cc
Q 044572 300 ASVTDLYAGAGVIGLSLAAA---RKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEP------L---SW 367 (457)
Q Consensus 300 ~~vLDl~cG~G~~sl~lA~~---~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~------~---~~ 367 (457)
+++| +-.|+|.+|..+|+. .| .+|+.++.+++.++.+.+.++. . .++.++.+|+.+.. . +.
T Consensus 22 k~vl-VTGas~gIG~aia~~La~~G-~~V~~~~r~~~~~~~~~~~~~~---~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 94 (272)
T 2nwq_A 22 STLF-ITGATSGFGEACARRFAEAG-WSLVLTGRREERLQALAGELSA---K--TRVLPLTLDVRDRAAMSAAVDNLPEE 94 (272)
T ss_dssp CEEE-ESSTTTSSHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHTT---T--SCEEEEECCTTCHHHHHHHHHTCCGG
T ss_pred cEEE-EeCCCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHhhc---C--CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4555 444556666655542 33 4899999999887766555432 1 46889999987631 1 11
Q ss_pred cCCccEEEECCC
Q 044572 368 LVGSDVLVVDPP 379 (457)
Q Consensus 368 ~~~~D~vi~DPP 379 (457)
.+..|++|.+--
T Consensus 95 ~g~iD~lvnnAG 106 (272)
T 2nwq_A 95 FATLRGLINNAG 106 (272)
T ss_dssp GSSCCEEEECCC
T ss_pred hCCCCEEEECCC
Confidence 245799988753
No 470
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=43.22 E-value=97 Score=28.62 Aligned_cols=76 Identities=16% Similarity=0.045 Sum_probs=49.9
Q ss_pred CCCeEEEEcccccHHHHHHHhh---CCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcc--c------
Q 044572 298 YGASVTDLYAGAGVIGLSLAAA---RKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPL--S------ 366 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~---~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~--~------ 366 (457)
.++++|=- .|+|.+|..+|+. .| .+|+.++.+.+.++.+.+.++.. ..++.++.+|+.+... .
T Consensus 27 ~~k~~lVT-Gas~GIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~ 100 (283)
T 3v8b_A 27 PSPVALIT-GAGSGIGRATALALAADG-VTVGALGRTRTEVEEVADEIVGA----GGQAIALEADVSDELQMRNAVRDLV 100 (283)
T ss_dssp CCCEEEEE-SCSSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHHHHTTT----TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEE-CCCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhc----CCcEEEEEccCCCHHHHHHHHHHHH
Confidence 46666644 4556666665542 33 48999999999887777665442 2468899999976311 1
Q ss_pred -ccCCccEEEECCC
Q 044572 367 -WLVGSDVLVVDPP 379 (457)
Q Consensus 367 -~~~~~D~vi~DPP 379 (457)
..++.|++|.+--
T Consensus 101 ~~~g~iD~lVnnAg 114 (283)
T 3v8b_A 101 LKFGHLDIVVANAG 114 (283)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HHhCCCCEEEECCC
Confidence 1247899988654
No 471
>3t8y_A CHEB, chemotaxis response regulator protein-glutamate methylesterase; CHEA, hydrolase; 1.90A {Thermotoga maritima}
Probab=43.13 E-value=92 Score=25.65 Aligned_cols=78 Identities=13% Similarity=0.075 Sum_probs=48.1
Q ss_pred CEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccc-cCCccEEEECCCCCCcc-HHHHHHHHhcCCCCcE
Q 044572 323 RSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSW-LVGSDVLVVDPPRKGLD-SSLVHALQSIGSAERK 400 (457)
Q Consensus 323 ~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~-~~~~D~vi~DPPR~Gl~-~~v~~~l~~~~~~~~i 400 (457)
-+|.-||-++...+..+.-++..+ ...+.....+..+.+... ...+|+||+|---.+.+ -++++.++...+ -.+
T Consensus 26 ~~ILivdd~~~~~~~l~~~L~~~~---~~~~v~~~~~~~~al~~l~~~~~dlvilD~~l~~~~g~~l~~~lr~~~~-~~i 101 (164)
T 3t8y_A 26 IRVLVVDDSAFMRMVLKDIIDSQP---DMKVVGFAKDGLEAVEKAIELKPDVITMDIEMPNLNGIEALKLIMKKAP-TRV 101 (164)
T ss_dssp EEEEEECSCHHHHHHHHHHHHTST---TEEEEEEESSHHHHHHHHHHHCCSEEEECSSCSSSCHHHHHHHHHHHSC-CEE
T ss_pred cEEEEEcCCHHHHHHHHHHHhcCC---CeEEEEecCCHHHHHHHhccCCCCEEEEeCCCCCCCHHHHHHHHHhcCC-ceE
Confidence 479999999999888887776521 111111234443332221 24699999996433332 357888887764 677
Q ss_pred EEEe
Q 044572 401 AKSL 404 (457)
Q Consensus 401 vyvs 404 (457)
+.++
T Consensus 102 i~~s 105 (164)
T 3t8y_A 102 IMVS 105 (164)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 7776
No 472
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=42.74 E-value=85 Score=28.45 Aligned_cols=76 Identities=20% Similarity=0.148 Sum_probs=52.2
Q ss_pred CCCeEEEEcccccHHHHHHHhh---CCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcc--c------
Q 044572 298 YGASVTDLYAGAGVIGLSLAAA---RKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPL--S------ 366 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~---~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~--~------ 366 (457)
.++++| +-.|+|.+|..+|+. .| .+|+.++.+++.++.+.+.++.. ..++.++.+|+.+... .
T Consensus 28 ~~k~vl-ITGas~gIG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~ 101 (262)
T 3rkr_A 28 SGQVAV-VTGASRGIGAAIARKLGSLG-ARVVLTARDVEKLRAVEREIVAA----GGEAESHACDLSHSDAIAAFATGVL 101 (262)
T ss_dssp TTCEEE-ESSTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHT----TCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEE-EECCCChHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHHh----CCceeEEEecCCCHHHHHHHHHHHH
Confidence 466777 555677777777653 33 47999999999888777776652 2478999999876311 1
Q ss_pred -ccCCccEEEECCC
Q 044572 367 -WLVGSDVLVVDPP 379 (457)
Q Consensus 367 -~~~~~D~vi~DPP 379 (457)
..+..|++|.+--
T Consensus 102 ~~~g~id~lv~~Ag 115 (262)
T 3rkr_A 102 AAHGRCDVLVNNAG 115 (262)
T ss_dssp HHHSCCSEEEECCC
T ss_pred HhcCCCCEEEECCC
Confidence 1246899998754
No 473
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=42.21 E-value=31 Score=33.19 Aligned_cols=42 Identities=21% Similarity=0.171 Sum_probs=32.2
Q ss_pred CCCeEEEEc--ccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHH
Q 044572 298 YGASVTDLY--AGAGVIGLSLAAARKCRSVKCVEINKESQLSFEK 340 (457)
Q Consensus 298 ~~~~vLDl~--cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~ 340 (457)
+|++||=.+ .|+|.+++.+|+..|+ +|++++.+++-++.+++
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~ 193 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGL-RVITTASRNETIEWTKK 193 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEECCSHHHHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHh
Confidence 588888663 3556677777777776 89999999998888775
No 474
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=41.80 E-value=20 Score=33.11 Aligned_cols=76 Identities=14% Similarity=0.078 Sum_probs=42.7
Q ss_pred CCeEEEEccc-ccH-HHHHHHhhCCCCEEEEEeCCH-------------------HHHHHHHHHHhhCCCCCCCcEEEEE
Q 044572 299 GASVTDLYAG-AGV-IGLSLAAARKCRSVKCVEINK-------------------ESQLSFEKTVSRLPKSVDGNISWHN 357 (457)
Q Consensus 299 ~~~vLDl~cG-~G~-~sl~lA~~~~~~~V~gVE~~~-------------------~av~~A~~Na~~~~~~~~~nv~~~~ 357 (457)
+.+|+=+||| .|. ++..|+. .|.++++.+|.+. .-++.+.+.++.. |-..+++.+.
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~-~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~--np~~~v~~~~ 107 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLAS-AGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRI--NPHIAITPVN 107 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHH-HTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHH--CTTSEEEEEC
T ss_pred CCeEEEEeeCHHHHHHHHHHHH-cCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHH--CCCcEEEEEe
Confidence 5678878775 343 3333443 5678999999986 4455555555442 2123455555
Q ss_pred ccCCcC-cccccCCccEEEEC
Q 044572 358 ADNSIE-PLSWLVGSDVLVVD 377 (457)
Q Consensus 358 ~d~~~~-~~~~~~~~D~vi~D 377 (457)
.+.... .......+|+||.-
T Consensus 108 ~~~~~~~~~~~~~~~DvVi~~ 128 (249)
T 1jw9_B 108 ALLDDAELAALIAEHDLVLDC 128 (249)
T ss_dssp SCCCHHHHHHHHHTSSEEEEC
T ss_pred ccCCHhHHHHHHhCCCEEEEe
Confidence 544321 11223578988863
No 475
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=41.39 E-value=1.1e+02 Score=28.42 Aligned_cols=75 Identities=15% Similarity=0.045 Sum_probs=47.2
Q ss_pred CCCeEEEEcccccHHHHHHHhh---CCCCEEEEEeCC------------HHHHHHHHHHHhhCCCCCCCcEEEEEccCCc
Q 044572 298 YGASVTDLYAGAGVIGLSLAAA---RKCRSVKCVEIN------------KESQLSFEKTVSRLPKSVDGNISWHNADNSI 362 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~---~~~~~V~gVE~~------------~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~ 362 (457)
.++++|=-| |+|.+|..+|+. .| .+|+.+|.+ ++.++.+.+.++.. ..++.++..|+.+
T Consensus 27 ~gk~~lVTG-as~GIG~aia~~la~~G-~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~ 100 (299)
T 3t7c_A 27 EGKVAFITG-AARGQGRSHAITLAREG-ADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEAL----GRRIIASQVDVRD 100 (299)
T ss_dssp TTCEEEEES-TTSHHHHHHHHHHHHTT-CEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHT----TCCEEEEECCTTC
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHHCC-CEEEEEecccccccccccccCHHHHHHHHHHHHhc----CCceEEEECCCCC
Confidence 466777555 455566555542 23 489999987 66666666555542 2478999999976
Q ss_pred Ccc--c-------ccCCccEEEECC
Q 044572 363 EPL--S-------WLVGSDVLVVDP 378 (457)
Q Consensus 363 ~~~--~-------~~~~~D~vi~DP 378 (457)
... . ..+..|++|.+-
T Consensus 101 ~~~v~~~~~~~~~~~g~iD~lv~nA 125 (299)
T 3t7c_A 101 FDAMQAAVDDGVTQLGRLDIVLANA 125 (299)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHHHHHhCCCCEEEECC
Confidence 311 1 124789998764
No 476
>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}
Probab=41.29 E-value=78 Score=31.84 Aligned_cols=106 Identities=12% Similarity=0.088 Sum_probs=59.0
Q ss_pred CCCeEEEEcccccHHHHHHHhh---C-C-CCEEEEEeCCHHHHHHHHHHHhhCCC-----------CCCCcEEEEEccCC
Q 044572 298 YGASVTDLYAGAGVIGLSLAAA---R-K-CRSVKCVEINKESQLSFEKTVSRLPK-----------SVDGNISWHNADNS 361 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~---~-~-~~~V~gVE~~~~av~~A~~Na~~~~~-----------~~~~nv~~~~~d~~ 361 (457)
.+++|| +-.|+|.+|..+++. . . ..+|++++.++......++-.+.... ....+++++.+|+.
T Consensus 72 ~~~~VL-VTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 150 (478)
T 4dqv_A 72 ELRTVL-LTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKS 150 (478)
T ss_dssp CCCEEE-EECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTT
T ss_pred CCCEEE-EECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECC
Confidence 467777 667889999888753 1 1 24899999876543322221111100 00247999999997
Q ss_pred cCc--------ccccCCccEEEEC-------CCCCCccH------HHHHHHHhcCCCCcEEEEec
Q 044572 362 IEP--------LSWLVGSDVLVVD-------PPRKGLDS------SLVHALQSIGSAERKAKSLS 405 (457)
Q Consensus 362 ~~~--------~~~~~~~D~vi~D-------PPR~Gl~~------~v~~~l~~~~~~~~ivyvs~ 405 (457)
+.. .......|+||.. ++...... .+++++... ..+++||+|+
T Consensus 151 ~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~-~~~~~V~iSS 214 (478)
T 4dqv_A 151 EPDLGLDQPMWRRLAETVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTT-KLKPFTYVST 214 (478)
T ss_dssp SGGGGCCHHHHHHHHHHCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSS-SCCCEEEEEE
T ss_pred CcccCCCHHHHHHHHcCCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEee
Confidence 431 1112357888753 22221111 234444443 3679999985
No 477
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=41.27 E-value=88 Score=29.84 Aligned_cols=61 Identities=10% Similarity=-0.060 Sum_probs=45.0
Q ss_pred CeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCc
Q 044572 300 ASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSI 362 (457)
Q Consensus 300 ~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~ 362 (457)
..|++||||-=+.+..+.. .....|+=|| .|+.++..++-+...+....++..++.+|+.+
T Consensus 104 ~QvV~LGaGlDTra~Rl~~-~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d 164 (310)
T 2uyo_A 104 RQFVILASGLDSRAYRLDW-PTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQ 164 (310)
T ss_dssp CEEEEETCTTCCHHHHSCC-CTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTS
T ss_pred CeEEEeCCCCCchhhhccC-CCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHh
Confidence 5799999999999877762 1124788888 69988888777764321124678999999986
No 478
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=41.12 E-value=84 Score=26.54 Aligned_cols=75 Identities=12% Similarity=0.064 Sum_probs=48.8
Q ss_pred CEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccc-cCCccEEEECCC---CCCccHHHHHHHHhcCCCC
Q 044572 323 RSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSW-LVGSDVLVVDPP---RKGLDSSLVHALQSIGSAE 398 (457)
Q Consensus 323 ~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~-~~~~D~vi~DPP---R~Gl~~~v~~~l~~~~~~~ 398 (457)
.+|.-||-++...+..+.-++..+ -.+ ....|..+.+... ...+|+||+|-- -.|+ ++++.++...+.-
T Consensus 8 ~~iLivdd~~~~~~~l~~~L~~~g----~~v-~~~~~~~~al~~~~~~~~dlvl~D~~lp~~~g~--~~~~~l~~~~~~~ 80 (184)
T 3rqi_A 8 KNFLVIDDNEVFAGTLARGLERRG----YAV-RQAHNKDEALKLAGAEKFEFITVXLHLGNDSGL--SLIAPLCDLQPDA 80 (184)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTT----CEE-EEECSHHHHHHHHTTSCCSEEEECSEETTEESH--HHHHHHHHHCTTC
T ss_pred CeEEEEcCCHHHHHHHHHHHHHCC----CEE-EEeCCHHHHHHHHhhCCCCEEEEeccCCCccHH--HHHHHHHhcCCCC
Confidence 489999999999888888777631 123 3344444333222 246999999953 3343 5788888765455
Q ss_pred cEEEEe
Q 044572 399 RKAKSL 404 (457)
Q Consensus 399 ~ivyvs 404 (457)
.++.+|
T Consensus 81 ~ii~lt 86 (184)
T 3rqi_A 81 RILVLT 86 (184)
T ss_dssp EEEEEE
T ss_pred CEEEEe
Confidence 677776
No 479
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=41.09 E-value=75 Score=29.24 Aligned_cols=75 Identities=16% Similarity=0.142 Sum_probs=50.0
Q ss_pred CCCeEEEEcccccHHHHHHHhh---CCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCc--ccc-----
Q 044572 298 YGASVTDLYAGAGVIGLSLAAA---RKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEP--LSW----- 367 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~---~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~--~~~----- 367 (457)
.++++| +-.|+|.+|..+++. .| .+|++++.+++.++.....++.. ...++.++.+|+.+.. ...
T Consensus 27 ~~k~vl-ITGasggIG~~la~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~v~~~~~~~~ 101 (286)
T 1xu9_A 27 QGKKVI-VTGASKGIGREMAYHLAKMG-AHVVVTARSKETLQKVVSHCLEL---GAASAHYIAGTMEDMTFAEQFVAQAG 101 (286)
T ss_dssp TTCEEE-ESSCSSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHH---TCSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEE-EeCCCcHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHHh---CCCceEEEeCCCCCHHHHHHHHHHHH
Confidence 366777 556777788777652 33 48999999998887766555432 1236889999987631 111
Q ss_pred --cCCccEEEEC
Q 044572 368 --LVGSDVLVVD 377 (457)
Q Consensus 368 --~~~~D~vi~D 377 (457)
.+..|++|.+
T Consensus 102 ~~~g~iD~li~n 113 (286)
T 1xu9_A 102 KLMGGLDMLILN 113 (286)
T ss_dssp HHHTSCSEEEEC
T ss_pred HHcCCCCEEEEC
Confidence 1468999877
No 480
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=41.09 E-value=68 Score=29.30 Aligned_cols=77 Identities=14% Similarity=0.088 Sum_probs=50.5
Q ss_pred CCCeEEEEcccccHHHHHHHhh---CCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcc--cc-----
Q 044572 298 YGASVTDLYAGAGVIGLSLAAA---RKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPL--SW----- 367 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~---~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~--~~----- 367 (457)
.++++| +-.|+|.+|..+|+. .| .+|+.++.+++.++.+.+.++.. ...++.++.+|+.+... ..
T Consensus 19 ~~k~vl-VTGas~gIG~aia~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~ 93 (266)
T 4egf_A 19 DGKRAL-ITGATKGIGADIARAFAAAG-ARLVLSGRDVSELDAARRALGEQ---FGTDVHTVAIDLAEPDAPAELARRAA 93 (266)
T ss_dssp TTCEEE-ETTTTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHH---HCCCEEEEECCTTSTTHHHHHHHHHH
T ss_pred CCCEEE-EeCCCcHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHHh---cCCcEEEEEecCCCHHHHHHHHHHHH
Confidence 466666 555667777666643 33 47999999998887766655431 12468999999987421 11
Q ss_pred --cCCccEEEECCC
Q 044572 368 --LVGSDVLVVDPP 379 (457)
Q Consensus 368 --~~~~D~vi~DPP 379 (457)
.+..|++|.+.-
T Consensus 94 ~~~g~id~lv~nAg 107 (266)
T 4egf_A 94 EAFGGLDVLVNNAG 107 (266)
T ss_dssp HHHTSCSEEEEECC
T ss_pred HHcCCCCEEEECCC
Confidence 146899988753
No 481
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=40.90 E-value=84 Score=25.27 Aligned_cols=80 Identities=15% Similarity=0.002 Sum_probs=49.0
Q ss_pred CCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccc-cCCccEEEECCCCCCcc-HHHHHHHHhcCCCCc
Q 044572 322 CRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSW-LVGSDVLVVDPPRKGLD-SSLVHALQSIGSAER 399 (457)
Q Consensus 322 ~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~-~~~~D~vi~DPPR~Gl~-~~v~~~l~~~~~~~~ 399 (457)
..+|.-||-++...+..+.-++..+ ...+-....+..+.+... ...+|+||+|---.+.+ -++++.++...+.-.
T Consensus 15 ~~~iLivdd~~~~~~~l~~~L~~~~---~~~~v~~~~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ 91 (152)
T 3eul_A 15 KVRVVVGDDHPLFREGVVRALSLSG---SVNVVGEADDGAAALELIKAHLPDVALLDYRMPGMDGAQVAAAVRSYELPTR 91 (152)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHS---SEEEEEEESSHHHHHHHHHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCSCE
T ss_pred eEEEEEEcCCHHHHHHHHHHHhhCC---CeEEEEEeCCHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCe
Confidence 3589999999998888877776521 111122344443332211 24699999995433332 357888887765556
Q ss_pred EEEEe
Q 044572 400 KAKSL 404 (457)
Q Consensus 400 ivyvs 404 (457)
++.++
T Consensus 92 ii~~s 96 (152)
T 3eul_A 92 VLLIS 96 (152)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 77776
No 482
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=40.58 E-value=1.1e+02 Score=28.11 Aligned_cols=76 Identities=12% Similarity=0.006 Sum_probs=49.2
Q ss_pred CCCeEEEEcccccHHHHHHHhh---CCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcc------c--
Q 044572 298 YGASVTDLYAGAGVIGLSLAAA---RKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPL------S-- 366 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~---~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~------~-- 366 (457)
.++++|=-| |+|.+|..+|+. .| .+|+.++.+++.++.+.+.++.. ..++.++.+|+.+... .
T Consensus 23 ~~k~~lVTG-as~GIG~aia~~la~~G-~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~ 96 (279)
T 3sju_A 23 RPQTAFVTG-VSSGIGLAVARTLAARG-IAVYGCARDAKNVSAAVDGLRAA----GHDVDGSSCDVTSTDEVHAAVAAAV 96 (279)
T ss_dssp --CEEEEES-TTSHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHTT----TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHHHHhc----CCcEEEEECCCCCHHHHHHHHHHHH
Confidence 356677444 556666665542 33 47999999999888777666542 2468999999976311 1
Q ss_pred -ccCCccEEEECCC
Q 044572 367 -WLVGSDVLVVDPP 379 (457)
Q Consensus 367 -~~~~~D~vi~DPP 379 (457)
..++.|++|.+--
T Consensus 97 ~~~g~id~lv~nAg 110 (279)
T 3sju_A 97 ERFGPIGILVNSAG 110 (279)
T ss_dssp HHHCSCCEEEECCC
T ss_pred HHcCCCcEEEECCC
Confidence 1246899988754
No 483
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=40.49 E-value=38 Score=30.15 Aligned_cols=97 Identities=15% Similarity=-0.022 Sum_probs=57.8
Q ss_pred CCeEEEEcccccHHHHHHHhh---CCC-CEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcC--cccccCCcc
Q 044572 299 GASVTDLYAGAGVIGLSLAAA---RKC-RSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIE--PLSWLVGSD 372 (457)
Q Consensus 299 ~~~vLDl~cG~G~~sl~lA~~---~~~-~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~--~~~~~~~~D 372 (457)
+++|| +-.|+|.+|..+++. .|. .+|++++.+++..+.. . ..++.++.+|+.+. +.......|
T Consensus 18 ~~~vl-VtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~----~------~~~~~~~~~D~~d~~~~~~~~~~~d 86 (242)
T 2bka_A 18 NKSVF-ILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE----A------YKNVNQEVVDFEKLDDYASAFQGHD 86 (242)
T ss_dssp CCEEE-EECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG----G------GGGCEEEECCGGGGGGGGGGGSSCS
T ss_pred CCeEE-EECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCcccc----c------cCCceEEecCcCCHHHHHHHhcCCC
Confidence 56777 556788888877653 232 2899999876532110 0 12568889998753 223345789
Q ss_pred EEEECCCCCCc--------------cHHHHHHHHhcCCCCcEEEEeccC
Q 044572 373 VLVVDPPRKGL--------------DSSLVHALQSIGSAERKAKSLSES 407 (457)
Q Consensus 373 ~vi~DPPR~Gl--------------~~~v~~~l~~~~~~~~ivyvs~~~ 407 (457)
+||..-..... ...+++++.+.. .+++|++||..
T Consensus 87 ~vi~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~iv~~SS~~ 134 (242)
T 2bka_A 87 VGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGG-CKHFNLLSSKG 134 (242)
T ss_dssp EEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTT
T ss_pred EEEECCCcccccCCcccceeeeHHHHHHHHHHHHHCC-CCEEEEEccCc
Confidence 99987543211 012344444443 68999998543
No 484
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=40.11 E-value=34 Score=32.83 Aligned_cols=91 Identities=15% Similarity=0.081 Sum_probs=54.3
Q ss_pred CCCCeEEEEc--ccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcc---cc--cC
Q 044572 297 PYGASVTDLY--AGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPL---SW--LV 369 (457)
Q Consensus 297 ~~~~~vLDl~--cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~---~~--~~ 369 (457)
.+|++||=.| .|.|.+++.+|+..|+ +|+++ .+++-++.+++ ++ .+ .+. +..+... .. ..
T Consensus 149 ~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga-~Vi~~-~~~~~~~~~~~----lG---a~---~i~-~~~~~~~~~~~~~~~~ 215 (343)
T 3gaz_A 149 QDGQTVLIQGGGGGVGHVAIQIALARGA-RVFAT-ARGSDLEYVRD----LG---AT---PID-ASREPEDYAAEHTAGQ 215 (343)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEE-ECHHHHHHHHH----HT---SE---EEE-TTSCHHHHHHHHHTTS
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEE-eCHHHHHHHHH----cC---CC---Eec-cCCCHHHHHHHHhcCC
Confidence 3689999888 3678888888887776 89999 88888777654 11 11 122 2222111 11 13
Q ss_pred CccEEEECCCCCCccHHHHHHHHhcCCCCcEEEEe
Q 044572 370 GSDVLVVDPPRKGLDSSLVHALQSIGSAERKAKSL 404 (457)
Q Consensus 370 ~~D~vi~DPPR~Gl~~~v~~~l~~~~~~~~ivyvs 404 (457)
.+|+||-. .| ...+...+..+++.++++.+.
T Consensus 216 g~D~vid~---~g-~~~~~~~~~~l~~~G~iv~~g 246 (343)
T 3gaz_A 216 GFDLVYDT---LG-GPVLDASFSAVKRFGHVVSCL 246 (343)
T ss_dssp CEEEEEES---SC-THHHHHHHHHEEEEEEEEESC
T ss_pred CceEEEEC---CC-cHHHHHHHHHHhcCCeEEEEc
Confidence 68877643 23 234555566666556666553
No 485
>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*
Probab=39.99 E-value=1.2e+02 Score=29.17 Aligned_cols=75 Identities=16% Similarity=0.060 Sum_probs=44.3
Q ss_pred CCCeEEEEcccccHHHHHHHhh---CCCCEEEEEeCCHHHHH-----------------HHHHHHhhCCCCCCCcEEEEE
Q 044572 298 YGASVTDLYAGAGVIGLSLAAA---RKCRSVKCVEINKESQL-----------------SFEKTVSRLPKSVDGNISWHN 357 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~---~~~~~V~gVE~~~~av~-----------------~A~~Na~~~~~~~~~nv~~~~ 357 (457)
.+.+|| +-.|+|.+|..++.. .| .+|+++|.+..... ..++-.... ..+++++.
T Consensus 10 ~~~~vl-VTG~tGfIG~~l~~~L~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~----~~~v~~~~ 83 (404)
T 1i24_A 10 HGSRVM-VIGGDGYCGWATALHLSKKN-YEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALT----GKSIELYV 83 (404)
T ss_dssp --CEEE-EETTTSHHHHHHHHHHHHTT-CEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHH----CCCCEEEE
T ss_pred CCCeEE-EeCCCcHHHHHHHHHHHhCC-CeEEEEEecCccccccccccccccccchhhhhhhhHhhcc----CCceEEEE
Confidence 467777 778899999988753 23 48999998754321 111111110 13678999
Q ss_pred ccCCcCc--ccccC--CccEEEECC
Q 044572 358 ADNSIEP--LSWLV--GSDVLVVDP 378 (457)
Q Consensus 358 ~d~~~~~--~~~~~--~~D~vi~DP 378 (457)
+|+.+.. ..... .+|+||..-
T Consensus 84 ~Dl~d~~~~~~~~~~~~~D~Vih~A 108 (404)
T 1i24_A 84 GDICDFEFLAESFKSFEPDSVVHFG 108 (404)
T ss_dssp SCTTSHHHHHHHHHHHCCSEEEECC
T ss_pred CCCCCHHHHHHHHhccCCCEEEECC
Confidence 9987531 11222 389888754
No 486
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=39.60 E-value=33 Score=34.01 Aligned_cols=71 Identities=17% Similarity=-0.035 Sum_probs=42.9
Q ss_pred CCeEEEEcccccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccc---cCCccEEE
Q 044572 299 GASVTDLYAGAGVIGLSLAAARKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSW---LVGSDVLV 375 (457)
Q Consensus 299 ~~~vLDl~cG~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~---~~~~D~vi 375 (457)
.-+++|||||.|. |+.- .|.. + +. |. ....++.+|+.+..... ...+|+|+
T Consensus 189 ~ikvidLFaGiGg-Gl~~---aGf~-v-----------------~~---N~-~~~~~~~~DI~~i~~~~i~~~~~~Dlli 242 (386)
T 2pv0_B 189 PVRVLSLFEDIKK-ELTS---LGFL-E-----------------SG---SD-PGQLKHVVDVTDTVRKDVEEWGPFDLVY 242 (386)
T ss_dssp CCCEEEESSCCHH-HHHH---TTSS-C-----------------SS---CC-SCSEEEESCCTTCCHHHHHHSCCCSEEE
T ss_pred CceeeEEeccCCh-hHhh---cCcc-H-----------------HH---cC-CCCcEEeCChhhCCHhHhcccCCCCEEE
Confidence 4579999999995 4433 3433 2 12 11 12246789998754321 24689999
Q ss_pred ECCCCCCcc---------HHHHHHHHhcC
Q 044572 376 VDPPRKGLD---------SSLVHALQSIG 395 (457)
Q Consensus 376 ~DPPR~Gl~---------~~v~~~l~~~~ 395 (457)
--||-.+.+ -+.++.+..++
T Consensus 243 GG~PCQ~FS~A~~Rg~Lf~ef~Riv~~~r 271 (386)
T 2pv0_B 243 GATPPLGHTCDRPPSWYLFQFHRLLQYAR 271 (386)
T ss_dssp EECCCTTTCSCSCTHHHHHHHHHHHHHHS
T ss_pred ECCCCCcccccCCcchHHHHHHHHHHHhC
Confidence 999954322 24566666665
No 487
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=39.24 E-value=1.2e+02 Score=27.44 Aligned_cols=74 Identities=12% Similarity=0.088 Sum_probs=47.9
Q ss_pred CCeEEEEcccccHHHHHHHhh---CCCCEEEEE-eCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcc--c------
Q 044572 299 GASVTDLYAGAGVIGLSLAAA---RKCRSVKCV-EINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPL--S------ 366 (457)
Q Consensus 299 ~~~vLDl~cG~G~~sl~lA~~---~~~~~V~gV-E~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~--~------ 366 (457)
++++| +-.|+|.+|..+|+. .|+ +|+.+ +.+++..+.+.+.++.. ..++.++.+|+.+... .
T Consensus 4 ~k~vl-VTGas~gIG~aia~~l~~~G~-~vv~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~ 77 (258)
T 3oid_A 4 NKCAL-VTGSSRGVGKAAAIRLAENGY-NIVINYARSKKAALETAEEIEKL----GVKVLVVKANVGQPAKIKEMFQQID 77 (258)
T ss_dssp CCEEE-ESSCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTT----TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEE-EecCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhc----CCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 55566 455667777766653 343 67765 88888877776666542 2468999999976311 1
Q ss_pred -ccCCccEEEECC
Q 044572 367 -WLVGSDVLVVDP 378 (457)
Q Consensus 367 -~~~~~D~vi~DP 378 (457)
..++.|++|.+-
T Consensus 78 ~~~g~id~lv~nA 90 (258)
T 3oid_A 78 ETFGRLDVFVNNA 90 (258)
T ss_dssp HHHSCCCEEEECC
T ss_pred HHcCCCCEEEECC
Confidence 124689999876
No 488
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=39.20 E-value=24 Score=34.18 Aligned_cols=41 Identities=20% Similarity=0.162 Sum_probs=30.6
Q ss_pred CCCeEEEEccc-ccHHHHHHHhhCCCCEEEEEeCCHHHHHHHH
Q 044572 298 YGASVTDLYAG-AGVIGLSLAAARKCRSVKCVEINKESQLSFE 339 (457)
Q Consensus 298 ~~~~vLDl~cG-~G~~sl~lA~~~~~~~V~gVE~~~~av~~A~ 339 (457)
+|++||=.++| .|.+++.+|+..|+ +|++++.+++-++.++
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~~~~~~~~~~~ 221 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSNKKREEAL 221 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSTTHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHH
Confidence 78898888763 45566667766665 8999999988776665
No 489
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=39.09 E-value=1.3e+02 Score=24.41 Aligned_cols=77 Identities=12% Similarity=0.038 Sum_probs=49.1
Q ss_pred EEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccc-cC--CccEEEECCCCCCcc-HHHHHHHHhcCCCCc
Q 044572 324 SVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSW-LV--GSDVLVVDPPRKGLD-SSLVHALQSIGSAER 399 (457)
Q Consensus 324 ~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~-~~--~~D~vi~DPPR~Gl~-~~v~~~l~~~~~~~~ 399 (457)
+|.-||-++...+..+.-++..+ -++.....+..+.+... .. .+|+||+|---.+.+ -++++.|+...+.-.
T Consensus 38 ~Ilivdd~~~~~~~l~~~L~~~g----~~v~~~~~~~~~al~~l~~~~~~~dliilD~~l~~~~g~~~~~~lr~~~~~~~ 113 (157)
T 3hzh_A 38 NVLIVDDSVFTVKQLTQIFTSEG----FNIIDTAADGEEAVIKYKNHYPNIDIVTLXITMPKMDGITCLSNIMEFDKNAR 113 (157)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTT----CEEEEEESSHHHHHHHHHHHGGGCCEEEECSSCSSSCHHHHHHHHHHHCTTCC
T ss_pred EEEEEeCCHHHHHHHHHHHHhCC----CeEEEEECCHHHHHHHHHhcCCCCCEEEEeccCCCccHHHHHHHHHhhCCCCc
Confidence 89999999999888887776621 12322344444433222 12 689999996543333 357888887665556
Q ss_pred EEEEe
Q 044572 400 KAKSL 404 (457)
Q Consensus 400 ivyvs 404 (457)
+++++
T Consensus 114 ii~ls 118 (157)
T 3hzh_A 114 VIMIS 118 (157)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 77776
No 490
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=38.89 E-value=34 Score=34.52 Aligned_cols=45 Identities=20% Similarity=0.231 Sum_probs=33.3
Q ss_pred CCeEEEEcccccHHHHHHHhh---CC--CCEEEEEeCCHHHHHHHHHHHh
Q 044572 299 GASVTDLYAGAGVIGLSLAAA---RK--CRSVKCVEINKESQLSFEKTVS 343 (457)
Q Consensus 299 ~~~vLDl~cG~G~~sl~lA~~---~~--~~~V~gVE~~~~av~~A~~Na~ 343 (457)
.-.|+|+|+|.|+++.-+.+. .+ ..+++.||+|+...+.=++++.
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~ 187 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLG 187 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHH
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHh
Confidence 368999999999987766532 11 2489999999988766565554
No 491
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=38.78 E-value=66 Score=30.90 Aligned_cols=99 Identities=12% Similarity=0.151 Sum_probs=59.2
Q ss_pred CCeEEEEcccccHHHHHHHhh---CCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEcc-CCcC--cccccCCcc
Q 044572 299 GASVTDLYAGAGVIGLSLAAA---RKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNAD-NSIE--PLSWLVGSD 372 (457)
Q Consensus 299 ~~~vLDl~cG~G~~sl~lA~~---~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d-~~~~--~~~~~~~~D 372 (457)
+++|| +..|+|.+|..+++. .+ .+|++++.++.... + +.+.. ..+++++.+| +.+. +.......|
T Consensus 5 ~~~il-VtGatG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~-~-~~l~~-----~~~v~~v~~D~l~d~~~l~~~~~~~d 75 (352)
T 1xgk_A 5 KKTIA-VVGATGRQGASLIRVAAAVG-HHVRAQVHSLKGLI-A-EELQA-----IPNVTLFQGPLLNNVPLMDTLFEGAH 75 (352)
T ss_dssp CCCEE-EESTTSHHHHHHHHHHHHTT-CCEEEEESCSCSHH-H-HHHHT-----STTEEEEESCCTTCHHHHHHHHTTCS
T ss_pred CCEEE-EECCCCHHHHHHHHHHHhCC-CEEEEEECCCChhh-H-HHHhh-----cCCcEEEECCccCCHHHHHHHHhcCC
Confidence 34555 667899999887753 23 47999988765432 1 12221 1357899999 7653 222235689
Q ss_pred EEEECCCCC-C----ccHHHHHHHHhcCCCCcEEEEecc
Q 044572 373 VLVVDPPRK-G----LDSSLVHALQSIGSAERKAKSLSE 406 (457)
Q Consensus 373 ~vi~DPPR~-G----l~~~v~~~l~~~~~~~~ivyvs~~ 406 (457)
+||....-. . ....+++++.+....+++||+|+.
T Consensus 76 ~Vi~~a~~~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~ 114 (352)
T 1xgk_A 76 LAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMP 114 (352)
T ss_dssp EEEECCCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECC
T ss_pred EEEEcCCCCCcHHHHHHHHHHHHHHHcCCccEEEEeCCc
Confidence 998765422 1 113455555554225799999854
No 492
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=38.29 E-value=1.5e+02 Score=23.62 Aligned_cols=79 Identities=10% Similarity=0.057 Sum_probs=48.0
Q ss_pred CEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccc----------cCCccEEEECCCCCCcc-HHHHHHH
Q 044572 323 RSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSW----------LVGSDVLVVDPPRKGLD-SSLVHAL 391 (457)
Q Consensus 323 ~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~----------~~~~D~vi~DPPR~Gl~-~~v~~~l 391 (457)
.+|.-||-++...+..+.-++..+ ....+. ...+..+.+... ...+|+||+|---.+.+ -++++.+
T Consensus 5 ~~ILivddd~~~~~~l~~~L~~~g--~~~~v~-~~~~~~~al~~l~~~~~~~~~~~~~~dliilD~~l~~~~g~~~~~~l 81 (152)
T 3heb_A 5 VTIVMIEDDLGHARLIEKNIRRAG--VNNEII-AFTDGTSALNYLFGDDKSGRVSAGRAQLVLLDLNLPDMTGIDILKLV 81 (152)
T ss_dssp CEEEEECCCHHHHHHHHHHHHHTT--CCCCEE-EESSHHHHHHHHHCTTSSSGGGTTCBEEEEECSBCSSSBHHHHHHHH
T ss_pred ceEEEEeCCHHHHHHHHHHHHhCC--CcceEE-EeCCHHHHHHHHhccccccccccCCCCEEEEeCCCCCCcHHHHHHHH
Confidence 379999999999888888877632 111333 333433332211 24699999996433332 2678888
Q ss_pred Hh--cCCCCcEEEEe
Q 044572 392 QS--IGSAERKAKSL 404 (457)
Q Consensus 392 ~~--~~~~~~ivyvs 404 (457)
+. ..+.-.++.++
T Consensus 82 r~~~~~~~~pii~~t 96 (152)
T 3heb_A 82 KENPHTRRSPVVILT 96 (152)
T ss_dssp HHSTTTTTSCEEEEE
T ss_pred HhcccccCCCEEEEe
Confidence 77 33334566665
No 493
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=38.18 E-value=39 Score=34.23 Aligned_cols=62 Identities=19% Similarity=0.208 Sum_probs=43.0
Q ss_pred cccccHHHHHHHhhCC--CCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcC--cccc-cCCccEEEE
Q 044572 306 YAGAGVIGLSLAAARK--CRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIE--PLSW-LVGSDVLVV 376 (457)
Q Consensus 306 ~cG~G~~sl~lA~~~~--~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~--~~~~-~~~~D~vi~ 376 (457)
=||.|-+|..+|+.-- ...|+.||.+++.++.+..+. .+..+.||+.+. +.+. ....|++|.
T Consensus 8 I~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~---------~~~~i~Gd~~~~~~L~~Agi~~ad~~ia 74 (461)
T 4g65_A 8 ILGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY---------DLRVVNGHASHPDVLHEAGAQDADMLVA 74 (461)
T ss_dssp EECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS---------SCEEEESCTTCHHHHHHHTTTTCSEEEE
T ss_pred EECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc---------CcEEEEEcCCCHHHHHhcCCCcCCEEEE
Confidence 4778889988887531 246999999999998766432 247889998763 2211 256787775
No 494
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=38.15 E-value=39 Score=32.27 Aligned_cols=90 Identities=11% Similarity=0.066 Sum_probs=51.7
Q ss_pred CeEEEEcccccHHHHHHHhhCC-CCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcC--cccc-cCCccEEE
Q 044572 300 ASVTDLYAGAGVIGLSLAAARK-CRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIE--PLSW-LVGSDVLV 375 (457)
Q Consensus 300 ~~vLDl~cG~G~~sl~lA~~~~-~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~--~~~~-~~~~D~vi 375 (457)
.+++ =||.|.+|..+++... ...|+.+|.+++.++ +++ ..+.++.||+.+. +.+. ....|.|+
T Consensus 116 ~~vi--I~G~G~~g~~l~~~L~~~g~v~vid~~~~~~~-~~~----------~~~~~i~gd~~~~~~L~~a~i~~a~~vi 182 (336)
T 1lnq_A 116 RHVV--ICGWSESTLECLRELRGSEVFVLAEDENVRKK-VLR----------SGANFVHGDPTRVSDLEKANVRGARAVI 182 (336)
T ss_dssp CEEE--EESCCHHHHHHHTTGGGSCEEEEESCGGGHHH-HHH----------TTCEEEESCTTSHHHHHHTCSTTEEEEE
T ss_pred CCEE--EECCcHHHHHHHHHHHhCCcEEEEeCChhhhh-HHh----------CCcEEEEeCCCCHHHHHhcChhhccEEE
Confidence 4555 3566889988886421 112999999999887 542 1357899998763 1221 35678887
Q ss_pred ECCCCCCccHHHHHHHHhcCCCCcEEE
Q 044572 376 VDPPRKGLDSSLVHALQSIGSAERKAK 402 (457)
Q Consensus 376 ~DPPR~Gl~~~v~~~l~~~~~~~~ivy 402 (457)
+--+.....-.+...++++.+..+++.
T Consensus 183 ~~~~~d~~n~~~~~~ar~~~~~~~iia 209 (336)
T 1lnq_A 183 VDLESDSETIHCILGIRKIDESVRIIA 209 (336)
T ss_dssp ECCSSHHHHHHHHHHHHTTCTTSEEEE
T ss_pred EcCCccHHHHHHHHHHHHHCCCCeEEE
Confidence 744422111123444555542224443
No 495
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=37.97 E-value=1.2e+02 Score=27.69 Aligned_cols=76 Identities=18% Similarity=0.073 Sum_probs=47.9
Q ss_pred CCCeEEEEcccccHHHHHHHhh---CCCCEEEEEeCC------------HHHHHHHHHHHhhCCCCCCCcEEEEEccCCc
Q 044572 298 YGASVTDLYAGAGVIGLSLAAA---RKCRSVKCVEIN------------KESQLSFEKTVSRLPKSVDGNISWHNADNSI 362 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~---~~~~~V~gVE~~------------~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~ 362 (457)
.++++|=-| |+|.+|..+|+. .| .+|+.+|.+ .+.++...+.++.. ..++.++.+|+.+
T Consensus 12 ~gk~vlVTG-as~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~ 85 (278)
T 3sx2_A 12 TGKVAFITG-AARGQGRAHAVRLAADG-ADIIAVDLCDQIASVPYPLATPEELAATVKLVEDI----GSRIVARQADVRD 85 (278)
T ss_dssp TTCEEEEES-TTSHHHHHHHHHHHHTT-CEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHH----TCCEEEEECCTTC
T ss_pred CCCEEEEEC-CCChHHHHHHHHHHHCC-CeEEEEecccccccccccccchHHHHHHHHHHHhc----CCeEEEEeCCCCC
Confidence 466777444 566666665542 23 479999987 66666655555442 2478999999976
Q ss_pred Ccc--cc-------cCCccEEEECCC
Q 044572 363 EPL--SW-------LVGSDVLVVDPP 379 (457)
Q Consensus 363 ~~~--~~-------~~~~D~vi~DPP 379 (457)
... .. .++.|++|.+--
T Consensus 86 ~~~v~~~~~~~~~~~g~id~lv~nAg 111 (278)
T 3sx2_A 86 RESLSAALQAGLDELGRLDIVVANAG 111 (278)
T ss_dssp HHHHHHHHHHHHHHHCCCCEEEECCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 311 11 147899998754
No 496
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=37.86 E-value=1.4e+02 Score=27.23 Aligned_cols=76 Identities=16% Similarity=0.031 Sum_probs=48.6
Q ss_pred CCCeEEEEcccccHHHHHHHhh---CCCCEEEEEeCC------------HHHHHHHHHHHhhCCCCCCCcEEEEEccCCc
Q 044572 298 YGASVTDLYAGAGVIGLSLAAA---RKCRSVKCVEIN------------KESQLSFEKTVSRLPKSVDGNISWHNADNSI 362 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~---~~~~~V~gVE~~------------~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~ 362 (457)
.++++| +-.|+|.+|..+|+. .| .+|+.+|.+ .+.++.+...++.. ..++.++.+|+.+
T Consensus 9 ~gk~vl-VTGas~gIG~~ia~~l~~~G-~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~ 82 (287)
T 3pxx_A 9 QDKVVL-VTGGARGQGRSHAVKLAEEG-ADIILFDICHDIETNEYPLATSRDLEEAGLEVEKT----GRKAYTAEVDVRD 82 (287)
T ss_dssp TTCEEE-EETTTSHHHHHHHHHHHHTT-CEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHT----TSCEEEEECCTTC
T ss_pred CCCEEE-EeCCCChHHHHHHHHHHHCC-CeEEEEcccccccccccchhhhHHHHHHHHHHHhc----CCceEEEEccCCC
Confidence 366677 444556666665542 23 489999987 67776666665542 2478999999876
Q ss_pred Ccc--cc-------cCCccEEEECCC
Q 044572 363 EPL--SW-------LVGSDVLVVDPP 379 (457)
Q Consensus 363 ~~~--~~-------~~~~D~vi~DPP 379 (457)
... .. .++.|++|.+--
T Consensus 83 ~~~v~~~~~~~~~~~g~id~lv~nAg 108 (287)
T 3pxx_A 83 RAAVSRELANAVAEFGKLDVVVANAG 108 (287)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 311 11 147899988754
No 497
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=37.49 E-value=1.4e+02 Score=27.18 Aligned_cols=76 Identities=16% Similarity=0.023 Sum_probs=48.5
Q ss_pred CCCeEEEEcccccHHHHHHHhh---CCCCEEEEEeC-------------CHHHHHHHHHHHhhCCCCCCCcEEEEEccCC
Q 044572 298 YGASVTDLYAGAGVIGLSLAAA---RKCRSVKCVEI-------------NKESQLSFEKTVSRLPKSVDGNISWHNADNS 361 (457)
Q Consensus 298 ~~~~vLDl~cG~G~~sl~lA~~---~~~~~V~gVE~-------------~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~ 361 (457)
.++++|=- .|+|.+|..+|+. .| .+|+.+|. +++.++.+.+.++.. ..++.++..|+.
T Consensus 14 ~gk~~lVT-Gas~gIG~a~a~~la~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~ 87 (280)
T 3pgx_A 14 QGRVAFIT-GAARGQGRSHAVRLAAEG-ADIIACDICAPVSASVTYAPASPEDLDETARLVEDQ----GRKALTRVLDVR 87 (280)
T ss_dssp TTCEEEEE-STTSHHHHHHHHHHHHTT-CEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTT----TCCEEEEECCTT
T ss_pred CCCEEEEE-CCCcHHHHHHHHHHHHCC-CEEEEEeccccccccccccccCHHHHHHHHHHHHhc----CCeEEEEEcCCC
Confidence 46677744 4556666665542 33 48999998 677777766665542 247889999987
Q ss_pred cCc--cc-------ccCCccEEEECCC
Q 044572 362 IEP--LS-------WLVGSDVLVVDPP 379 (457)
Q Consensus 362 ~~~--~~-------~~~~~D~vi~DPP 379 (457)
+.. .. ..++.|++|.+--
T Consensus 88 ~~~~v~~~~~~~~~~~g~id~lvnnAg 114 (280)
T 3pgx_A 88 DDAALRELVADGMEQFGRLDVVVANAG 114 (280)
T ss_dssp CHHHHHHHHHHHHHHHCCCCEEEECCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 631 11 1247899988754
No 498
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=37.49 E-value=2e+02 Score=27.37 Aligned_cols=104 Identities=17% Similarity=0.081 Sum_probs=56.9
Q ss_pred CeEEEEcccccHHHHHHHhh----CCCCEEEEEeCCHHH---------HHHHHHHHhhCCCC-CCCc---EEEEEccCCc
Q 044572 300 ASVTDLYAGAGVIGLSLAAA----RKCRSVKCVEINKES---------QLSFEKTVSRLPKS-VDGN---ISWHNADNSI 362 (457)
Q Consensus 300 ~~vLDl~cG~G~~sl~lA~~----~~~~~V~gVE~~~~a---------v~~A~~Na~~~~~~-~~~n---v~~~~~d~~~ 362 (457)
++|| +-.|+|.+|..+++. .+ .+|++++.+... .+..+.-++..... ...+ ++++.+|+.+
T Consensus 3 m~vl-VTGatG~iG~~l~~~L~~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d 80 (397)
T 1gy8_A 3 MRVL-VCGGAGYIGSHFVRALLRDTN-HSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRN 80 (397)
T ss_dssp CEEE-EETTTSHHHHHHHHHHHHHCC-CEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTC
T ss_pred CEEE-EECCCCHHHHHHHHHHHHhCC-CEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCC
Confidence 4555 456789888877642 23 489999876432 22222212221100 0123 8899999876
Q ss_pred Cc--cccc---CCccEEEECCCCCCcc-----------------HHHHHHHHhcCCCCcEEEEecc
Q 044572 363 EP--LSWL---VGSDVLVVDPPRKGLD-----------------SSLVHALQSIGSAERKAKSLSE 406 (457)
Q Consensus 363 ~~--~~~~---~~~D~vi~DPPR~Gl~-----------------~~v~~~l~~~~~~~~ivyvs~~ 406 (457)
.. .... +.+|+||..-...... ..+++++.+.. .+++||+||.
T Consensus 81 ~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~-~~~iv~~SS~ 145 (397)
T 1gy8_A 81 EDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHK-CDKIIFSSSA 145 (397)
T ss_dssp HHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEG
T ss_pred HHHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhC-CCEEEEECCH
Confidence 31 1112 2389998865432211 12445554543 6899999863
No 499
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=37.19 E-value=1.1e+02 Score=27.30 Aligned_cols=74 Identities=16% Similarity=0.070 Sum_probs=50.2
Q ss_pred CCeEEEEcccccHHHHHHHhh----CCCCEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCc--ccc-----
Q 044572 299 GASVTDLYAGAGVIGLSLAAA----RKCRSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEP--LSW----- 367 (457)
Q Consensus 299 ~~~vLDl~cG~G~~sl~lA~~----~~~~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~--~~~----- 367 (457)
++++| +-.|+|.+|..+++. .| .+|+.++.+.+..+.+.+.++.. ..++.++.+|+.+.. ...
T Consensus 4 ~k~vl-ITGasggIG~~~a~~L~~~~g-~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dl~~~~~~~~~~~~~~ 77 (276)
T 1wma_A 4 IHVAL-VTGGNKGIGLAIVRDLCRLFS-GDVVLTARDVTRGQAAVQQLQAE----GLSPRFHQLDIDDLQSIRALRDFLR 77 (276)
T ss_dssp CCEEE-ESSCSSHHHHHHHHHHHHHSS-SEEEEEESSHHHHHHHHHHHHHT----TCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHhcC-CeEEEEeCChHHHHHHHHHHHhc----CCeeEEEECCCCCHHHHHHHHHHHH
Confidence 45666 666888888887753 23 48999999988777766666542 146789999987631 111
Q ss_pred --cCCccEEEECC
Q 044572 368 --LVGSDVLVVDP 378 (457)
Q Consensus 368 --~~~~D~vi~DP 378 (457)
.+..|+||.+-
T Consensus 78 ~~~g~id~li~~A 90 (276)
T 1wma_A 78 KEYGGLDVLVNNA 90 (276)
T ss_dssp HHHSSEEEEEECC
T ss_pred HhcCCCCEEEECC
Confidence 13689888764
No 500
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=37.13 E-value=1.5e+02 Score=23.29 Aligned_cols=79 Identities=10% Similarity=-0.013 Sum_probs=47.3
Q ss_pred CEEEEEeCCHHHHHHHHHHHhhCCCCCCCcEEEEEccCCcCcccc-cCCccEEEECCCCCCcc-HHHHHHHHh--cCCCC
Q 044572 323 RSVKCVEINKESQLSFEKTVSRLPKSVDGNISWHNADNSIEPLSW-LVGSDVLVVDPPRKGLD-SSLVHALQS--IGSAE 398 (457)
Q Consensus 323 ~~V~gVE~~~~av~~A~~Na~~~~~~~~~nv~~~~~d~~~~~~~~-~~~~D~vi~DPPR~Gl~-~~v~~~l~~--~~~~~ 398 (457)
.+|.-||-++...+..+.-++..+ ....-....+..+.+... ...+|+||+|.--.+.+ -++++.++. ..+.-
T Consensus 6 ~~ILivdd~~~~~~~l~~~L~~~~---~~~~v~~~~~~~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~ 82 (144)
T 3kht_A 6 KRVLVVEDNPDDIALIRRVLDRKD---IHCQLEFVDNGAKALYQVQQAKYDLIILDIGLPIANGFEVMSAVRKPGANQHT 82 (144)
T ss_dssp EEEEEECCCHHHHHHHHHHHHHTT---CCEEEEEESSHHHHHHHHTTCCCSEEEECTTCGGGCHHHHHHHHHSSSTTTTC
T ss_pred CEEEEEeCCHHHHHHHHHHHHhcC---CCeeEEEECCHHHHHHHhhcCCCCEEEEeCCCCCCCHHHHHHHHHhcccccCC
Confidence 379999999998888887777632 111122333433332222 24699999997543332 257888877 33344
Q ss_pred cEEEEe
Q 044572 399 RKAKSL 404 (457)
Q Consensus 399 ~ivyvs 404 (457)
.++.++
T Consensus 83 pii~~s 88 (144)
T 3kht_A 83 PIVILT 88 (144)
T ss_dssp CEEEEE
T ss_pred CEEEEe
Confidence 566665
Done!