Query 044575
Match_columns 454
No_of_seqs 392 out of 3617
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 07:40:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044575.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044575hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2xve_A Flavin-containing monoo 100.0 5.2E-59 1.8E-63 469.5 38.8 398 13-429 3-414 (464)
2 2gv8_A Monooxygenase; FMO, FAD 100.0 4E-53 1.4E-57 425.6 35.1 364 11-402 5-409 (447)
3 4a9w_A Monooxygenase; baeyer-v 100.0 2E-40 7E-45 322.9 26.9 299 12-354 3-351 (357)
4 3gwf_A Cyclohexanone monooxyge 100.0 2.3E-39 8E-44 330.9 23.7 314 12-351 8-453 (540)
5 3uox_A Otemo; baeyer-villiger 100.0 1.7E-38 5.8E-43 324.9 27.0 314 11-351 8-462 (545)
6 4ap3_A Steroid monooxygenase; 100.0 1.5E-38 5.1E-43 325.6 26.3 314 11-351 20-467 (549)
7 3d1c_A Flavin-containing putat 100.0 7.6E-37 2.6E-41 299.5 25.4 311 12-367 4-351 (369)
8 1w4x_A Phenylacetone monooxyge 100.0 1E-36 3.4E-41 313.0 26.8 314 11-351 15-462 (542)
9 3lzw_A Ferredoxin--NADP reduct 100.0 2.5E-36 8.6E-41 291.2 21.4 283 12-351 7-311 (332)
10 2q7v_A Thioredoxin reductase; 100.0 1.6E-35 5.6E-40 285.0 24.9 284 9-353 5-310 (325)
11 3f8d_A Thioredoxin reductase ( 100.0 1.4E-35 4.6E-40 284.9 22.5 276 12-351 15-313 (323)
12 2zbw_A Thioredoxin reductase; 100.0 1.8E-35 6.2E-40 285.9 22.0 284 12-352 5-314 (335)
13 3fbs_A Oxidoreductase; structu 100.0 7.4E-35 2.5E-39 276.4 23.6 273 13-351 3-288 (297)
14 3ab1_A Ferredoxin--NADP reduct 100.0 1.7E-34 6E-39 281.9 23.9 288 9-352 11-325 (360)
15 3itj_A Thioredoxin reductase 1 100.0 1E-34 3.5E-39 280.6 21.1 291 10-351 20-331 (338)
16 2q0l_A TRXR, thioredoxin reduc 100.0 1.7E-34 5.8E-39 276.1 22.0 285 13-351 2-305 (311)
17 1fl2_A Alkyl hydroperoxide red 100.0 1.7E-34 5.7E-39 276.0 21.1 279 13-351 2-301 (310)
18 4gcm_A TRXR, thioredoxin reduc 100.0 2.8E-34 9.5E-39 274.9 22.5 276 12-351 6-302 (312)
19 3r9u_A Thioredoxin reductase; 100.0 2.6E-34 9E-39 275.0 22.2 287 12-351 4-308 (315)
20 3cty_A Thioredoxin reductase; 100.0 6E-34 2E-38 273.4 23.5 287 9-352 13-313 (319)
21 2a87_A TRXR, TR, thioredoxin r 100.0 9.8E-34 3.3E-38 273.8 22.8 286 10-351 12-312 (335)
22 3urh_A Dihydrolipoyl dehydroge 100.0 2.5E-34 8.6E-39 292.1 16.7 302 9-354 22-364 (491)
23 4a5l_A Thioredoxin reductase; 100.0 1.4E-33 4.8E-38 270.1 21.0 290 9-350 1-307 (314)
24 2wpf_A Trypanothione reductase 100.0 1.8E-34 6.3E-39 292.8 15.3 299 9-353 4-355 (495)
25 3l8k_A Dihydrolipoyl dehydroge 100.0 1.5E-34 5.3E-39 291.7 14.2 289 12-353 4-333 (466)
26 4eqs_A Coenzyme A disulfide re 100.0 6.5E-34 2.2E-38 284.2 18.6 282 13-355 1-313 (437)
27 1vdc_A NTR, NADPH dependent th 100.0 3.7E-33 1.3E-37 269.4 22.3 285 11-350 7-318 (333)
28 4g6h_A Rotenone-insensitive NA 100.0 6E-36 2E-40 303.3 2.6 356 11-431 41-500 (502)
29 2r9z_A Glutathione amide reduc 100.0 4E-34 1.4E-38 288.1 16.0 290 11-354 3-328 (463)
30 1mo9_A ORF3; nucleotide bindin 100.0 9.1E-34 3.1E-38 289.8 17.4 298 9-354 40-379 (523)
31 1trb_A Thioredoxin reductase; 100.0 3.9E-33 1.3E-37 267.7 20.7 282 12-351 5-310 (320)
32 1ges_A Glutathione reductase; 100.0 3.4E-34 1.2E-38 287.8 12.7 290 11-353 3-328 (450)
33 1hyu_A AHPF, alkyl hydroperoxi 100.0 1.9E-32 6.4E-37 279.6 25.6 281 11-351 211-512 (521)
34 1ojt_A Surface protein; redox- 100.0 1.4E-33 4.6E-38 286.0 16.9 301 9-354 3-350 (482)
35 4fk1_A Putative thioredoxin re 100.0 6E-33 2.1E-37 264.6 20.3 278 10-350 4-295 (304)
36 1onf_A GR, grase, glutathione 100.0 3.2E-33 1.1E-37 284.3 17.7 294 13-353 3-371 (500)
37 1dxl_A Dihydrolipoamide dehydr 100.0 1.6E-33 5.6E-38 284.8 14.9 305 11-354 5-343 (470)
38 1ebd_A E3BD, dihydrolipoamide 100.0 2.7E-33 9.1E-38 281.9 16.2 299 12-353 3-333 (455)
39 1v59_A Dihydrolipoamide dehydr 100.0 1.3E-33 4.6E-38 286.0 13.9 303 10-354 3-351 (478)
40 2qae_A Lipoamide, dihydrolipoy 100.0 2.8E-33 9.4E-38 282.8 16.1 299 12-354 2-341 (468)
41 1zk7_A HGII, reductase, mercur 100.0 3.7E-33 1.3E-37 281.8 16.9 296 11-353 3-334 (467)
42 3iwa_A FAD-dependent pyridine 100.0 9.2E-33 3.1E-37 279.3 19.8 286 13-354 4-330 (472)
43 1zmd_A Dihydrolipoyl dehydroge 100.0 2.6E-33 9E-38 283.4 15.1 299 12-354 6-346 (474)
44 4b1b_A TRXR, thioredoxin reduc 100.0 3.3E-33 1.1E-37 284.0 15.2 299 12-354 42-385 (542)
45 3kd9_A Coenzyme A disulfide re 100.0 2.3E-32 8E-37 274.6 20.8 275 12-354 3-316 (449)
46 2hqm_A GR, grase, glutathione 100.0 2.7E-33 9.2E-38 283.4 13.9 300 11-354 10-348 (479)
47 3klj_A NAD(FAD)-dependent dehy 100.0 1.3E-33 4.5E-38 277.1 11.2 265 9-354 6-295 (385)
48 3ic9_A Dihydrolipoamide dehydr 100.0 1.2E-33 4.2E-38 286.6 11.3 293 12-352 8-337 (492)
49 2eq6_A Pyruvate dehydrogenase 100.0 5.5E-33 1.9E-37 280.0 16.0 289 12-354 6-335 (464)
50 3ntd_A FAD-dependent pyridine 100.0 8E-33 2.7E-37 286.2 17.5 282 13-354 2-339 (565)
51 3qfa_A Thioredoxin reductase 1 100.0 4.6E-33 1.6E-37 284.2 15.0 300 9-354 29-381 (519)
52 3oc4_A Oxidoreductase, pyridin 100.0 9.1E-32 3.1E-36 270.4 24.2 276 13-354 3-315 (452)
53 2a8x_A Dihydrolipoyl dehydroge 100.0 4.5E-33 1.5E-37 281.0 14.7 292 13-352 4-333 (464)
54 3dk9_A Grase, GR, glutathione 100.0 4.2E-33 1.4E-37 282.2 14.6 292 11-353 19-356 (478)
55 4b63_A L-ornithine N5 monooxyg 100.0 4.4E-32 1.5E-36 275.4 22.0 215 11-240 38-283 (501)
56 1xdi_A RV3303C-LPDA; reductase 100.0 1.4E-32 4.6E-37 279.8 18.0 302 13-353 3-342 (499)
57 1fec_A Trypanothione reductase 100.0 1.1E-32 3.6E-37 279.6 16.8 296 12-353 3-351 (490)
58 3lxd_A FAD-dependent pyridine 100.0 1.1E-32 3.9E-37 274.1 16.5 279 10-354 7-322 (415)
59 3ics_A Coenzyme A-disulfide re 100.0 9.9E-33 3.4E-37 286.5 16.6 281 11-352 35-352 (588)
60 2yqu_A 2-oxoglutarate dehydrog 100.0 5.8E-33 2E-37 279.5 13.7 292 13-354 2-328 (455)
61 1lvl_A Dihydrolipoamide dehydr 100.0 1.7E-32 5.8E-37 276.0 16.7 297 12-354 5-331 (458)
62 3lad_A Dihydrolipoamide dehydr 100.0 1.1E-32 3.8E-37 279.1 15.4 299 11-354 2-344 (476)
63 3o0h_A Glutathione reductase; 100.0 1.7E-32 5.8E-37 278.1 16.4 290 12-354 26-352 (484)
64 4dna_A Probable glutathione re 100.0 9E-33 3.1E-37 278.6 14.2 290 12-354 5-332 (463)
65 3ef6_A Toluene 1,2-dioxygenase 100.0 2.1E-32 7.2E-37 271.5 16.5 273 13-354 3-310 (410)
66 1xhc_A NADH oxidase /nitrite r 100.0 1.1E-32 3.7E-37 269.2 13.3 267 12-354 8-298 (367)
67 3dgz_A Thioredoxin reductase 2 100.0 1.7E-32 5.7E-37 278.4 14.4 298 12-354 6-353 (488)
68 2bc0_A NADH oxidase; flavoprot 100.0 1.5E-31 5.2E-36 271.4 21.2 280 12-354 35-362 (490)
69 3s5w_A L-ornithine 5-monooxyge 100.0 1.7E-31 5.9E-36 269.5 21.3 319 12-351 30-445 (463)
70 3dgh_A TRXR-1, thioredoxin red 100.0 5.5E-32 1.9E-36 274.3 16.6 298 10-354 7-353 (483)
71 3fg2_P Putative rubredoxin red 100.0 7.9E-32 2.7E-36 267.0 16.5 275 13-354 2-311 (404)
72 2gqw_A Ferredoxin reductase; f 100.0 1.1E-31 3.8E-36 266.1 17.3 271 11-355 6-310 (408)
73 2cdu_A NADPH oxidase; flavoenz 100.0 1.5E-31 5.2E-36 268.9 18.3 281 13-354 1-318 (452)
74 1nhp_A NADH peroxidase; oxidor 100.0 3.8E-31 1.3E-35 265.6 18.4 279 13-354 1-317 (447)
75 2v3a_A Rubredoxin reductase; a 100.0 2.6E-31 9E-36 261.5 16.6 273 11-354 3-307 (384)
76 1q1r_A Putidaredoxin reductase 100.0 4.4E-31 1.5E-35 263.6 15.5 276 12-354 4-320 (431)
77 3cgb_A Pyridine nucleotide-dis 100.0 7E-31 2.4E-35 265.8 16.0 280 12-354 36-354 (480)
78 2x8g_A Thioredoxin glutathione 100.0 1E-30 3.4E-35 271.9 15.4 298 11-353 106-459 (598)
79 2vdc_G Glutamate synthase [NAD 100.0 5.2E-30 1.8E-34 256.5 13.4 265 11-352 121-441 (456)
80 1lqt_A FPRA; NADP+ derivative, 100.0 2.5E-29 8.7E-34 251.8 11.3 263 12-352 3-384 (456)
81 1m6i_A Programmed cell death p 100.0 8.1E-29 2.8E-33 251.2 14.3 300 9-354 8-353 (493)
82 2gag_A Heterotetrameric sarcos 100.0 5.7E-28 2E-32 262.3 21.1 294 11-352 127-441 (965)
83 3sx6_A Sulfide-quinone reducta 100.0 8.5E-29 2.9E-33 247.7 10.8 271 12-351 4-340 (437)
84 3h8l_A NADH oxidase; membrane 100.0 9.1E-29 3.1E-33 245.6 11.0 272 13-354 2-335 (409)
85 1cjc_A Protein (adrenodoxin re 100.0 1.1E-28 3.6E-33 247.6 11.1 263 12-352 6-392 (460)
86 3k30_A Histamine dehydrogenase 99.9 1.3E-28 4.3E-33 259.6 9.1 261 9-354 388-674 (690)
87 1o94_A Tmadh, trimethylamine d 99.9 2.1E-28 7.2E-33 258.9 10.3 270 10-354 387-699 (729)
88 1ps9_A 2,4-dienoyl-COA reducta 99.9 5.5E-27 1.9E-31 246.5 15.2 247 11-350 372-671 (671)
89 1gte_A Dihydropyrimidine dehyd 99.9 6.2E-26 2.1E-30 248.0 14.8 264 12-351 187-504 (1025)
90 3vrd_B FCCB subunit, flavocyto 99.9 4.3E-25 1.5E-29 218.5 17.5 278 12-357 2-330 (401)
91 3h28_A Sulfide-quinone reducta 99.9 1.6E-26 5.3E-31 230.8 4.1 266 13-351 3-329 (430)
92 1y56_A Hypothetical protein PH 99.9 3.6E-25 1.2E-29 224.4 13.9 255 12-357 108-379 (493)
93 3hyw_A Sulfide-quinone reducta 99.9 3.2E-26 1.1E-30 228.3 1.6 268 13-351 3-329 (430)
94 3fpz_A Thiazole biosynthetic e 99.6 1.6E-18 5.5E-23 166.3 -9.8 152 12-240 65-218 (326)
95 2gqf_A Hypothetical protein HI 99.6 9.4E-16 3.2E-20 150.9 5.9 149 12-176 4-170 (401)
96 2ywl_A Thioredoxin reductase r 99.5 3E-14 1E-18 124.2 8.7 133 207-352 3-168 (180)
97 2e5v_A L-aspartate oxidase; ar 99.4 5E-15 1.7E-19 148.9 -1.2 307 14-353 1-371 (472)
98 3v76_A Flavoprotein; structura 99.4 1.7E-12 5.8E-17 128.1 12.7 149 9-177 24-190 (417)
99 2ywl_A Thioredoxin reductase r 99.3 3.9E-12 1.3E-16 110.6 9.2 118 13-185 2-119 (180)
100 3ces_A MNMG, tRNA uridine 5-ca 99.3 9.1E-12 3.1E-16 127.4 10.8 182 11-236 27-221 (651)
101 2cul_A Glucose-inhibited divis 99.2 3.8E-11 1.3E-15 108.9 12.1 124 12-176 3-127 (232)
102 3cgv_A Geranylgeranyl reductas 99.2 5.8E-11 2E-15 116.5 14.2 145 12-174 4-162 (397)
103 3oz2_A Digeranylgeranylglycero 99.2 2.5E-11 8.7E-16 118.8 11.5 148 12-174 4-162 (397)
104 2i0z_A NAD(FAD)-utilizing dehy 99.2 1.5E-11 5E-16 122.9 9.8 147 12-176 26-193 (447)
105 3qj4_A Renalase; FAD/NAD(P)-bi 99.2 1.3E-11 4.4E-16 118.9 8.7 143 13-172 2-163 (342)
106 1rp0_A ARA6, thiazole biosynth 99.2 9.7E-11 3.3E-15 109.6 11.9 142 11-178 38-193 (284)
107 2zxi_A TRNA uridine 5-carboxym 99.2 5.7E-11 2E-15 121.1 10.9 182 11-236 26-220 (637)
108 3fmw_A Oxygenase; mithramycin, 99.2 8.5E-11 2.9E-15 120.6 12.3 149 12-174 49-207 (570)
109 3nlc_A Uncharacterized protein 99.2 1.6E-10 5.5E-15 117.2 13.0 147 12-174 107-277 (549)
110 2qa1_A PGAE, polyketide oxygen 99.2 2.6E-10 8.8E-15 115.4 14.4 153 8-174 7-165 (500)
111 3nix_A Flavoprotein/dehydrogen 99.2 1.4E-10 4.8E-15 114.8 11.8 147 12-174 5-166 (421)
112 3rp8_A Flavoprotein monooxygen 99.1 5.1E-11 1.7E-15 117.5 8.1 146 10-175 21-182 (407)
113 1yvv_A Amine oxidase, flavin-c 99.1 4.4E-10 1.5E-14 107.6 14.4 41 13-53 3-43 (336)
114 2bry_A NEDD9 interacting prote 99.1 6.3E-11 2.2E-15 119.8 8.7 140 11-175 91-231 (497)
115 2qa2_A CABE, polyketide oxygen 99.1 1.6E-10 5.6E-15 116.8 11.2 151 10-174 10-166 (499)
116 3alj_A 2-methyl-3-hydroxypyrid 99.1 2E-10 6.9E-15 112.1 11.3 138 11-174 10-160 (379)
117 2vou_A 2,6-dihydroxypyridine h 99.1 7.5E-11 2.6E-15 115.9 8.0 142 12-175 5-154 (397)
118 3dme_A Conserved exported prot 99.1 2.1E-10 7.2E-15 111.1 10.8 62 99-174 148-209 (369)
119 3i3l_A Alkylhalidase CMLS; fla 99.1 2.4E-10 8.2E-15 117.5 11.5 151 9-174 20-188 (591)
120 2xdo_A TETX2 protein; tetracyc 99.1 1.1E-10 3.9E-15 114.7 8.8 144 11-175 25-183 (398)
121 3c96_A Flavin-containing monoo 99.1 2.4E-10 8.2E-15 112.8 10.9 151 12-175 4-170 (410)
122 2x3n_A Probable FAD-dependent 99.1 2.1E-10 7.1E-15 112.8 9.4 143 12-174 6-166 (399)
123 3ihg_A RDME; flavoenzyme, anth 99.1 4.6E-10 1.6E-14 114.7 12.3 152 12-174 5-183 (535)
124 3dje_A Fructosyl amine: oxygen 99.1 3.5E-10 1.2E-14 112.6 10.6 60 99-175 159-222 (438)
125 3cp8_A TRNA uridine 5-carboxym 99.1 2.5E-10 8.4E-15 116.8 8.9 183 10-235 19-214 (641)
126 3e1t_A Halogenase; flavoprotei 99.1 7.6E-10 2.6E-14 112.4 12.3 150 12-174 7-172 (512)
127 1qo8_A Flavocytochrome C3 fuma 99.1 2.3E-09 7.9E-14 110.2 16.0 154 11-175 120-313 (566)
128 1y0p_A Fumarate reductase flav 99.1 1.8E-09 6.1E-14 111.2 15.1 152 12-174 126-317 (571)
129 2r0c_A REBC; flavin adenine di 99.0 1.4E-09 4.8E-14 111.3 14.0 145 12-174 26-196 (549)
130 2gmh_A Electron transfer flavo 99.0 1.7E-09 5.9E-14 111.3 14.4 151 12-174 35-217 (584)
131 1ryi_A Glycine oxidase; flavop 99.0 5.3E-10 1.8E-14 109.1 10.1 60 97-174 160-219 (382)
132 3da1_A Glycerol-3-phosphate de 99.0 1.2E-09 4.1E-14 112.0 13.0 65 99-174 168-232 (561)
133 3atr_A Conserved archaeal prot 99.0 6.6E-10 2.3E-14 111.1 10.5 142 12-174 6-162 (453)
134 2cul_A Glucose-inhibited divis 99.0 2.8E-10 9.6E-15 103.1 7.0 146 206-353 4-230 (232)
135 1y56_B Sarcosine oxidase; dehy 99.0 2.1E-09 7.3E-14 104.8 12.3 59 98-174 146-205 (382)
136 1k0i_A P-hydroxybenzoate hydro 99.0 2.1E-09 7E-14 105.4 12.1 149 13-175 3-164 (394)
137 3ps9_A TRNA 5-methylaminomethy 99.0 2.3E-09 7.8E-14 112.7 13.1 59 99-174 415-473 (676)
138 3jsk_A Cypbp37 protein; octame 99.0 4.2E-10 1.5E-14 106.6 6.7 108 12-133 79-191 (344)
139 2uzz_A N-methyl-L-tryptophan o 99.0 1.2E-09 4.2E-14 106.1 9.9 62 100-179 148-209 (372)
140 3k7m_X 6-hydroxy-L-nicotine ox 99.0 1.3E-09 4.4E-14 108.2 9.4 47 13-59 2-50 (431)
141 4hb9_A Similarities with proba 98.9 3.1E-09 1.1E-13 104.5 11.0 35 13-47 2-36 (412)
142 1d4d_A Flavocytochrome C fumar 98.9 1.4E-08 4.9E-13 104.3 15.8 152 12-174 126-317 (572)
143 4at0_A 3-ketosteroid-delta4-5a 98.9 4.1E-09 1.4E-13 106.9 11.4 40 12-51 41-80 (510)
144 3nyc_A D-arginine dehydrogenas 98.9 2.2E-09 7.6E-14 104.5 8.7 58 99-174 152-209 (381)
145 2dkh_A 3-hydroxybenzoate hydro 98.9 1E-08 3.6E-13 106.7 13.3 158 11-174 31-211 (639)
146 2oln_A NIKD protein; flavoprot 98.9 8.2E-09 2.8E-13 101.2 11.1 36 12-47 4-39 (397)
147 2gag_B Heterotetrameric sarcos 98.9 9.4E-09 3.2E-13 100.9 11.2 60 98-174 171-230 (405)
148 2qcu_A Aerobic glycerol-3-phos 98.8 1.6E-08 5.5E-13 102.3 12.7 64 99-174 147-210 (501)
149 2yqu_A 2-oxoglutarate dehydrog 98.8 2.1E-08 7.3E-13 100.2 12.8 102 12-180 167-268 (455)
150 2gjc_A Thiazole biosynthetic e 98.8 1.3E-08 4.4E-13 95.9 10.4 108 12-133 65-177 (326)
151 2h88_A Succinate dehydrogenase 98.8 7.5E-09 2.6E-13 106.8 9.2 154 11-175 17-218 (621)
152 3pvc_A TRNA 5-methylaminomethy 98.8 2.3E-08 7.8E-13 105.2 13.0 61 99-175 410-470 (689)
153 2gf3_A MSOX, monomeric sarcosi 98.8 2E-08 6.8E-13 98.0 11.1 58 99-174 148-205 (389)
154 2wdq_A Succinate dehydrogenase 98.8 1.9E-08 6.6E-13 103.5 11.1 154 12-175 7-207 (588)
155 1pn0_A Phenol 2-monooxygenase; 98.8 3.5E-08 1.2E-12 103.1 13.2 36 12-47 8-48 (665)
156 3kkj_A Amine oxidase, flavin-c 98.8 4.8E-09 1.6E-13 96.7 5.7 40 13-52 3-42 (336)
157 1v59_A Dihydrolipoamide dehydr 98.7 9.6E-08 3.3E-12 96.1 14.6 107 12-179 183-290 (478)
158 2aqj_A Tryptophan halogenase, 98.7 2E-08 6.8E-13 102.6 9.6 61 98-174 162-222 (538)
159 2eq6_A Pyruvate dehydrogenase 98.7 8.9E-08 3E-12 95.9 13.7 107 12-180 169-275 (464)
160 3c4a_A Probable tryptophan hyd 98.7 4.4E-09 1.5E-13 102.6 3.8 134 13-175 1-144 (381)
161 1ges_A Glutathione reductase; 98.7 6.5E-08 2.2E-12 96.5 12.3 102 12-179 167-268 (450)
162 1pj5_A N,N-dimethylglycine oxi 98.7 5.8E-08 2E-12 104.4 12.7 59 99-174 149-207 (830)
163 3i6d_A Protoporphyrinogen oxid 98.7 7.8E-08 2.7E-12 96.3 12.2 40 12-51 5-50 (470)
164 1kf6_A Fumarate reductase flav 98.7 3.2E-08 1.1E-12 102.1 9.4 37 12-48 5-43 (602)
165 1ebd_A E3BD, dihydrolipoamide 98.7 1.3E-07 4.3E-12 94.5 13.3 104 12-179 170-273 (455)
166 2bs2_A Quinol-fumarate reducta 98.7 3.5E-08 1.2E-12 102.6 9.3 64 100-174 157-220 (660)
167 2e4g_A Tryptophan halogenase; 98.7 6.7E-08 2.3E-12 98.9 11.0 61 98-174 191-252 (550)
168 1jnr_A Adenylylsulfate reducta 98.7 8.6E-08 2.9E-12 99.8 11.9 35 12-46 22-60 (643)
169 2pyx_A Tryptophan halogenase; 98.7 1.6E-07 5.4E-12 95.6 13.6 61 98-174 172-233 (526)
170 2v3a_A Rubredoxin reductase; a 98.7 1.2E-07 4.1E-12 92.5 11.9 101 12-178 145-245 (384)
171 1lvl_A Dihydrolipoamide dehydr 98.7 7.5E-08 2.6E-12 96.3 10.7 102 12-180 171-272 (458)
172 1chu_A Protein (L-aspartate ox 98.7 1.4E-08 5E-13 103.4 5.3 38 12-50 8-45 (540)
173 2rgh_A Alpha-glycerophosphate 98.7 1.1E-07 3.8E-12 97.6 11.8 64 100-174 187-250 (571)
174 1zmd_A Dihydrolipoyl dehydroge 98.6 2.5E-07 8.5E-12 92.9 14.1 108 12-179 178-285 (474)
175 1onf_A GR, grase, glutathione 98.6 2.3E-07 7.7E-12 93.8 13.5 103 12-179 176-278 (500)
176 3urh_A Dihydrolipoyl dehydroge 98.6 2.8E-07 9.5E-12 93.0 14.1 106 12-179 198-303 (491)
177 3s5w_A L-ornithine 5-monooxyge 98.6 1.8E-07 6.2E-12 93.6 12.5 176 12-214 227-418 (463)
178 1nhp_A NADH peroxidase; oxidor 98.6 1.1E-07 3.8E-12 94.7 10.6 104 11-181 148-251 (447)
179 2weu_A Tryptophan 5-halogenase 98.6 5.3E-08 1.8E-12 98.8 8.4 62 98-175 170-231 (511)
180 3c4n_A Uncharacterized protein 98.6 4.5E-08 1.5E-12 96.3 7.6 36 12-47 36-73 (405)
181 1dxl_A Dihydrolipoamide dehydr 98.6 2.3E-07 7.7E-12 93.1 12.1 106 12-179 177-282 (470)
182 1fec_A Trypanothione reductase 98.6 2.2E-07 7.6E-12 93.6 11.7 102 12-179 187-291 (490)
183 2wpf_A Trypanothione reductase 98.6 2.7E-07 9.2E-12 93.1 12.3 102 12-179 191-295 (495)
184 3lxd_A FAD-dependent pyridine 98.6 3.9E-07 1.3E-11 89.8 12.9 102 12-178 152-253 (415)
185 2qae_A Lipoamide, dihydrolipoy 98.6 4.5E-07 1.6E-11 90.8 13.1 105 12-179 174-279 (468)
186 2a8x_A Dihydrolipoyl dehydroge 98.6 4.6E-07 1.6E-11 90.7 13.0 104 12-179 171-274 (464)
187 2r9z_A Glutathione amide reduc 98.6 3.9E-07 1.3E-11 91.2 12.3 102 12-179 166-267 (463)
188 2hqm_A GR, grase, glutathione 98.5 3.4E-07 1.2E-11 92.0 11.8 103 12-178 185-287 (479)
189 3fg2_P Putative rubredoxin red 98.5 3.8E-07 1.3E-11 89.6 11.6 103 11-178 141-243 (404)
190 1ojt_A Surface protein; redox- 98.5 2.1E-07 7.1E-12 93.7 9.9 104 12-179 185-289 (482)
191 3ic9_A Dihydrolipoamide dehydr 98.5 7.4E-07 2.5E-11 89.8 13.9 105 12-180 174-278 (492)
192 3dgh_A TRXR-1, thioredoxin red 98.5 1.1E-06 3.8E-11 88.4 15.1 106 12-179 187-292 (483)
193 2gqw_A Ferredoxin reductase; f 98.5 4.2E-07 1.4E-11 89.4 11.5 97 12-178 145-241 (408)
194 3ef6_A Toluene 1,2-dioxygenase 98.5 3.3E-07 1.1E-11 90.2 10.6 102 11-178 142-243 (410)
195 3gyx_A Adenylylsulfate reducta 98.5 8.8E-08 3E-12 99.5 6.7 36 12-47 22-63 (662)
196 3dk9_A Grase, GR, glutathione 98.5 9.2E-07 3.1E-11 88.8 14.0 108 12-179 187-296 (478)
197 1xdi_A RV3303C-LPDA; reductase 98.5 5.4E-07 1.8E-11 91.1 12.3 101 12-179 182-282 (499)
198 3axb_A Putative oxidoreductase 98.5 2.1E-07 7.1E-12 92.7 9.2 38 11-48 22-60 (448)
199 1q1r_A Putidaredoxin reductase 98.5 5.3E-07 1.8E-11 89.3 11.8 103 11-178 148-252 (431)
200 3cgb_A Pyridine nucleotide-dis 98.5 3E-07 1E-11 92.4 10.1 101 11-179 185-285 (480)
201 3dgz_A Thioredoxin reductase 2 98.5 1.6E-06 5.4E-11 87.3 15.3 106 12-179 185-290 (488)
202 3iwa_A FAD-dependent pyridine 98.5 6.6E-07 2.3E-11 89.8 12.4 101 12-178 159-260 (472)
203 3lad_A Dihydrolipoamide dehydr 98.5 1E-06 3.5E-11 88.5 13.6 104 12-179 180-283 (476)
204 3o0h_A Glutathione reductase; 98.5 7.7E-07 2.6E-11 89.6 12.4 101 12-179 191-291 (484)
205 3oc4_A Oxidoreductase, pyridin 98.5 1.1E-06 3.8E-11 87.6 13.4 103 11-180 146-248 (452)
206 4gut_A Lysine-specific histone 98.5 8E-07 2.7E-11 93.9 12.8 40 11-50 335-374 (776)
207 1zk7_A HGII, reductase, mercur 98.5 6.8E-07 2.3E-11 89.5 11.6 99 12-179 176-274 (467)
208 4gde_A UDP-galactopyranose mut 98.5 8.4E-08 2.9E-12 97.3 5.0 41 12-52 10-51 (513)
209 3ntd_A FAD-dependent pyridine 98.5 7.9E-07 2.7E-11 91.3 12.3 109 12-178 151-269 (565)
210 1trb_A Thioredoxin reductase; 98.5 7.4E-07 2.5E-11 84.3 11.2 106 11-179 144-250 (320)
211 3hyw_A Sulfide-quinone reducta 98.5 2.8E-07 9.7E-12 91.3 8.5 87 206-292 3-111 (430)
212 1v0j_A UDP-galactopyranose mut 98.5 1.2E-07 4.2E-12 92.9 5.8 45 9-53 4-49 (399)
213 4b1b_A TRXR, thioredoxin reduc 98.5 1E-06 3.6E-11 89.3 12.4 100 12-179 223-322 (542)
214 4eqs_A Coenzyme A disulfide re 98.4 4.6E-07 1.6E-11 89.9 9.5 97 12-179 147-243 (437)
215 2bc0_A NADH oxidase; flavoprot 98.4 7.8E-07 2.7E-11 89.6 11.3 102 11-179 193-294 (490)
216 2cdu_A NADPH oxidase; flavoenz 98.4 9E-07 3.1E-11 88.2 11.7 101 12-179 149-250 (452)
217 1mo9_A ORF3; nucleotide bindin 98.4 1.3E-06 4.6E-11 88.6 12.7 102 13-179 215-319 (523)
218 2e1m_A L-glutamate oxidase; L- 98.4 1.5E-07 5.2E-12 90.8 5.3 44 10-53 42-86 (376)
219 4dgk_A Phytoene dehydrogenase; 98.4 1E-07 3.6E-12 96.3 4.3 40 13-52 2-41 (501)
220 3sx6_A Sulfide-quinone reducta 98.4 7.9E-07 2.7E-11 88.2 10.3 89 206-295 5-117 (437)
221 3pl8_A Pyranose 2-oxidase; sub 98.4 9.7E-07 3.3E-11 91.3 11.2 43 9-51 43-85 (623)
222 2bcg_G Secretory pathway GDP d 98.4 2.1E-07 7E-12 92.9 5.9 45 9-53 8-52 (453)
223 1xhc_A NADH oxidase /nitrite r 98.4 5.7E-07 1.9E-11 87.1 8.5 93 13-178 144-236 (367)
224 3hdq_A UDP-galactopyranose mut 98.4 2.1E-07 7.3E-12 90.5 5.5 43 10-52 27-69 (397)
225 3vrd_B FCCB subunit, flavocyto 98.4 5.3E-07 1.8E-11 88.4 8.4 91 204-295 1-113 (401)
226 4dna_A Probable glutathione re 98.4 1.6E-06 5.4E-11 86.7 11.8 101 12-179 170-271 (463)
227 3qfa_A Thioredoxin reductase 1 98.4 3.7E-06 1.3E-10 85.3 14.6 109 12-179 210-318 (519)
228 2b9w_A Putative aminooxidase; 98.4 3.4E-07 1.2E-11 90.5 5.9 42 11-52 5-47 (424)
229 1s3e_A Amine oxidase [flavin-c 98.4 2.8E-07 9.6E-12 93.7 5.4 42 11-52 3-44 (520)
230 2jae_A L-amino acid oxidase; o 98.3 3.1E-07 1.1E-11 92.5 5.7 45 8-52 7-51 (489)
231 3klj_A NAD(FAD)-dependent dehy 98.3 7.9E-07 2.7E-11 86.6 8.2 90 206-295 10-121 (385)
232 2zbw_A Thioredoxin reductase; 98.3 2.5E-06 8.4E-11 81.3 11.3 104 12-179 152-255 (335)
233 3ics_A Coenzyme A-disulfide re 98.3 1.6E-06 5.5E-11 89.4 10.6 98 12-178 187-284 (588)
234 1m6i_A Programmed cell death p 98.3 2.6E-06 8.8E-11 85.8 11.8 102 12-179 180-285 (493)
235 1rsg_A FMS1 protein; FAD bindi 98.3 2.7E-07 9.3E-12 93.7 4.2 41 12-52 8-49 (516)
236 3itj_A Thioredoxin reductase 1 98.3 2.2E-06 7.4E-11 81.6 9.9 103 11-179 172-274 (338)
237 3h8l_A NADH oxidase; membrane 98.3 1.5E-06 5.2E-11 85.4 8.5 89 206-295 2-118 (409)
238 3nrn_A Uncharacterized protein 98.3 5.6E-07 1.9E-11 88.8 5.4 40 13-52 1-40 (421)
239 3h28_A Sulfide-quinone reducta 98.3 1.6E-06 5.4E-11 85.9 8.6 89 206-295 3-114 (430)
240 3kd9_A Coenzyme A disulfide re 98.3 2.4E-06 8.1E-11 85.1 9.8 100 11-178 147-246 (449)
241 3fbs_A Oxidoreductase; structu 98.3 1.7E-06 5.9E-11 80.7 8.0 90 206-295 3-117 (297)
242 3ka7_A Oxidoreductase; structu 98.3 6E-07 2E-11 88.6 5.0 40 13-52 1-40 (425)
243 1fl2_A Alkyl hydroperoxide red 98.2 6.8E-06 2.3E-10 77.2 11.8 101 12-179 144-245 (310)
244 1sez_A Protoporphyrinogen oxid 98.2 6.9E-07 2.4E-11 90.3 5.1 44 9-52 10-53 (504)
245 2yg5_A Putrescine oxidase; oxi 98.2 5.5E-07 1.9E-11 89.7 4.3 41 12-52 5-45 (453)
246 3ab1_A Ferredoxin--NADP reduct 98.2 4.5E-06 1.5E-10 80.4 10.6 104 12-179 163-266 (360)
247 4dsg_A UDP-galactopyranose mut 98.2 1E-06 3.4E-11 88.6 6.1 43 11-53 8-51 (484)
248 2q0l_A TRXR, thioredoxin reduc 98.2 3.1E-06 1.1E-10 79.6 8.7 103 11-179 142-244 (311)
249 2bi7_A UDP-galactopyranose mut 98.2 1.1E-06 3.7E-11 85.6 5.5 41 13-53 4-44 (384)
250 3cty_A Thioredoxin reductase; 98.2 9.2E-06 3.2E-10 76.7 11.8 101 12-179 155-255 (319)
251 3l8k_A Dihydrolipoyl dehydroge 98.2 5.3E-06 1.8E-10 83.0 10.6 104 12-179 172-275 (466)
252 2x8g_A Thioredoxin glutathione 98.2 1.7E-05 5.7E-10 82.0 14.5 108 12-179 286-398 (598)
253 1vdc_A NTR, NADPH dependent th 98.2 4.1E-06 1.4E-10 79.6 9.1 105 11-179 158-262 (333)
254 3nks_A Protoporphyrinogen oxid 98.2 9.4E-07 3.2E-11 88.7 4.8 40 13-52 3-44 (477)
255 2ivd_A PPO, PPOX, protoporphyr 98.2 1E-06 3.5E-11 88.4 4.9 42 11-52 15-56 (478)
256 2q7v_A Thioredoxin reductase; 98.2 4.2E-06 1.4E-10 79.4 8.8 102 11-179 151-252 (325)
257 4g6h_A Rotenone-insensitive NA 98.2 8.8E-06 3E-10 82.0 11.5 101 13-177 218-333 (502)
258 1i8t_A UDP-galactopyranose mut 98.2 1.3E-06 4.3E-11 84.6 5.0 41 13-53 2-42 (367)
259 3d1c_A Flavin-containing putat 98.2 5.3E-06 1.8E-10 80.0 9.4 107 12-178 166-274 (369)
260 1d5t_A Guanine nucleotide diss 98.2 1.6E-06 5.4E-11 85.9 5.7 45 9-53 3-47 (433)
261 2vvm_A Monoamine oxidase N; FA 98.1 1.2E-06 4E-11 88.5 4.6 40 13-52 40-79 (495)
262 3f8d_A Thioredoxin reductase ( 98.1 7.8E-06 2.7E-10 77.1 10.0 101 11-178 153-253 (323)
263 3p1w_A Rabgdi protein; GDI RAB 98.1 1.8E-06 6E-11 85.8 5.1 47 7-53 15-61 (475)
264 2iid_A L-amino-acid oxidase; f 98.1 1.9E-06 6.5E-11 87.0 5.1 43 10-52 31-73 (498)
265 1rp0_A ARA6, thiazole biosynth 98.1 5.7E-06 1.9E-10 77.0 7.7 147 206-352 40-272 (284)
266 3lov_A Protoporphyrinogen oxid 98.1 2.3E-06 7.7E-11 85.9 5.2 41 12-52 4-46 (475)
267 4a5l_A Thioredoxin reductase; 98.1 1.1E-05 3.9E-10 75.8 9.6 103 11-179 151-253 (314)
268 2a87_A TRXR, TR, thioredoxin r 98.1 5.1E-06 1.7E-10 79.2 6.9 104 11-181 154-257 (335)
269 3r9u_A Thioredoxin reductase; 98.1 7.9E-06 2.7E-10 76.8 8.1 102 11-179 146-247 (315)
270 3lzw_A Ferredoxin--NADP reduct 98.0 2.2E-05 7.6E-10 74.3 11.1 100 12-179 154-253 (332)
271 1c0p_A D-amino acid oxidase; a 98.0 5.5E-06 1.9E-10 79.9 5.8 35 11-45 5-39 (363)
272 4fk1_A Putative thioredoxin re 98.0 1.3E-05 4.6E-10 75.1 8.3 90 207-296 8-123 (304)
273 1b37_A Protein (polyamine oxid 98.0 4.4E-06 1.5E-10 83.7 5.2 43 11-53 3-46 (472)
274 1hyu_A AHPF, alkyl hydroperoxi 98.0 3.2E-05 1.1E-09 78.4 11.5 101 12-179 355-456 (521)
275 3alj_A 2-methyl-3-hydroxypyrid 97.9 1.9E-05 6.4E-10 76.7 8.0 87 205-291 11-161 (379)
276 4a9w_A Monooxygenase; baeyer-v 97.9 1.5E-05 5E-10 76.3 6.6 83 206-289 4-131 (357)
277 2z3y_A Lysine-specific histone 97.9 9.1E-06 3.1E-10 84.9 5.4 43 10-52 105-147 (662)
278 2xag_A Lysine-specific histone 97.9 1.1E-05 3.9E-10 85.8 5.7 42 11-52 277-318 (852)
279 3ihm_A Styrene monooxygenase A 97.8 8.8E-06 3E-10 80.5 4.3 34 12-45 22-55 (430)
280 4hb9_A Similarities with proba 97.8 3.4E-05 1.2E-09 75.3 8.4 34 207-240 3-36 (412)
281 3k30_A Histamine dehydrogenase 97.8 5.6E-05 1.9E-09 79.3 10.2 102 12-178 523-626 (690)
282 3rp8_A Flavoprotein monooxygen 97.8 4E-05 1.4E-09 75.1 8.5 85 204-289 22-180 (407)
283 2xve_A Flavin-containing monoo 97.8 8E-05 2.7E-09 74.3 10.3 36 11-46 196-231 (464)
284 2bry_A NEDD9 interacting prote 97.8 2.8E-05 9.6E-10 78.3 6.7 89 204-292 91-232 (497)
285 1yvv_A Amine oxidase, flavin-c 97.8 5.6E-05 1.9E-09 71.7 8.3 34 206-239 3-36 (336)
286 4ap3_A Steroid monooxygenase; 97.8 3.9E-05 1.3E-09 78.1 7.5 89 206-294 22-165 (549)
287 2gv8_A Monooxygenase; FMO, FAD 97.7 3E-05 1E-09 77.0 6.4 35 205-239 6-42 (447)
288 2vou_A 2,6-dihydroxypyridine h 97.7 7.3E-05 2.5E-09 72.9 8.8 87 205-291 5-154 (397)
289 4gcm_A TRXR, thioredoxin reduc 97.7 0.0001 3.4E-09 69.3 9.4 35 12-46 145-179 (312)
290 3gwf_A Cyclohexanone monooxyge 97.7 4.8E-05 1.6E-09 77.3 7.3 88 206-293 9-152 (540)
291 3g3e_A D-amino-acid oxidase; F 97.7 2E-05 7E-10 75.5 4.0 34 13-46 1-40 (351)
292 3g5s_A Methylenetetrahydrofola 97.7 4.8E-05 1.6E-09 72.7 6.1 35 13-47 2-36 (443)
293 3uox_A Otemo; baeyer-villiger 97.7 5.8E-05 2E-09 76.8 7.1 89 206-294 10-153 (545)
294 2x3n_A Probable FAD-dependent 97.6 8.1E-05 2.8E-09 72.6 7.6 35 206-240 7-41 (399)
295 3nlc_A Uncharacterized protein 97.6 3.6E-05 1.2E-09 78.0 4.5 33 206-238 108-140 (549)
296 2xdo_A TETX2 protein; tetracyc 97.6 0.00021 7.3E-09 69.6 9.8 86 206-291 27-183 (398)
297 3v76_A Flavoprotein; structura 97.6 7.8E-05 2.7E-09 73.2 6.2 35 206-240 28-62 (417)
298 2vdc_G Glutamate synthase [NAD 97.5 0.00013 4.4E-09 72.5 7.6 35 11-45 263-298 (456)
299 2gag_A Heterotetrameric sarcos 97.5 0.00033 1.1E-08 76.2 10.2 97 12-178 284-385 (965)
300 3ayj_A Pro-enzyme of L-phenyla 97.5 4.1E-05 1.4E-09 79.5 2.8 36 12-47 56-100 (721)
301 1cjc_A Protein (adrenodoxin re 97.5 0.00064 2.2E-08 67.6 11.4 35 12-46 145-200 (460)
302 1w4x_A Phenylacetone monooxyge 97.5 0.00021 7.2E-09 72.7 7.9 84 206-289 17-153 (542)
303 3qj4_A Renalase; FAD/NAD(P)-bi 97.4 0.00018 6E-09 68.6 7.0 34 206-239 2-38 (342)
304 1o94_A Tmadh, trimethylamine d 97.4 0.00029 1E-08 74.3 8.8 34 12-45 528-563 (729)
305 1ps9_A 2,4-dienoyl-COA reducta 97.4 0.00038 1.3E-08 72.8 8.7 29 12-40 494-522 (671)
306 1vg0_A RAB proteins geranylger 97.4 0.00017 5.7E-09 74.0 5.7 48 1-52 1-48 (650)
307 3t37_A Probable dehydrogenase; 97.4 0.00011 3.9E-09 74.4 4.5 36 11-46 16-52 (526)
308 3nix_A Flavoprotein/dehydrogen 97.3 0.00017 5.7E-09 70.8 5.5 33 206-238 6-38 (421)
309 1lqt_A FPRA; NADP+ derivative, 97.3 0.00078 2.7E-08 66.8 10.3 35 12-46 147-202 (456)
310 2gqf_A Hypothetical protein HI 97.3 0.00033 1.1E-08 68.3 6.6 34 207-240 6-39 (401)
311 3ces_A MNMG, tRNA uridine 5-ca 97.2 0.00036 1.2E-08 71.5 6.8 33 206-238 29-61 (651)
312 1kdg_A CDH, cellobiose dehydro 97.2 0.0002 6.9E-09 72.9 4.8 36 11-46 6-41 (546)
313 1gte_A Dihydropyrimidine dehyd 97.2 0.0015 5.1E-08 71.6 11.9 34 12-45 332-366 (1025)
314 1ju2_A HydroxynitrIle lyase; f 97.2 8.6E-05 2.9E-09 75.4 1.9 36 11-47 25-60 (536)
315 2jbv_A Choline oxidase; alcoho 97.1 0.00024 8.3E-09 72.2 4.2 47 1-47 1-49 (546)
316 2zxi_A TRNA uridine 5-carboxym 97.1 0.00062 2.1E-08 69.5 6.7 33 206-238 28-60 (637)
317 3i3l_A Alkylhalidase CMLS; fla 97.1 0.00099 3.4E-08 68.3 8.2 34 205-238 23-56 (591)
318 1k0i_A P-hydroxybenzoate hydro 97.1 0.00064 2.2E-08 66.0 6.6 33 207-239 4-36 (394)
319 3cp8_A TRNA uridine 5-carboxym 97.1 0.00066 2.3E-08 69.5 6.7 33 206-238 22-54 (641)
320 4g65_A TRK system potassium up 97.1 0.0002 6.8E-09 71.1 2.5 76 204-289 234-311 (461)
321 3c96_A Flavin-containing monoo 97.0 0.00066 2.3E-08 66.4 6.1 34 206-239 5-39 (410)
322 2i0z_A NAD(FAD)-utilizing dehy 97.0 0.00081 2.8E-08 66.6 6.7 34 206-239 27-60 (447)
323 3q9t_A Choline dehydrogenase a 97.0 0.00038 1.3E-08 71.1 4.0 36 11-46 5-41 (577)
324 1gpe_A Protein (glucose oxidas 97.0 0.00059 2E-08 70.0 5.3 37 11-47 23-60 (587)
325 1n4w_A CHOD, cholesterol oxida 97.0 0.00055 1.9E-08 68.9 5.0 37 12-48 5-41 (504)
326 3cgv_A Geranylgeranyl reductas 97.0 0.00075 2.6E-08 65.4 5.8 34 206-239 5-38 (397)
327 3e1t_A Halogenase; flavoprotei 96.9 0.0013 4.4E-08 66.4 7.2 33 206-238 8-40 (512)
328 3dme_A Conserved exported prot 96.9 0.0013 4.3E-08 62.9 6.9 33 206-238 5-37 (369)
329 2qa2_A CABE, polyketide oxygen 96.9 0.0017 5.7E-08 65.3 7.9 35 206-240 13-47 (499)
330 1coy_A Cholesterol oxidase; ox 96.9 0.00069 2.4E-08 68.3 4.7 37 10-46 9-45 (507)
331 3qvp_A Glucose oxidase; oxidor 96.8 0.00074 2.5E-08 68.9 4.7 35 11-45 18-53 (583)
332 1y56_A Hypothetical protein PH 96.8 0.00059 2E-08 68.5 3.6 87 206-293 109-222 (493)
333 2qa1_A PGAE, polyketide oxygen 96.7 0.0018 6.1E-08 65.1 6.6 35 206-240 12-46 (500)
334 3fmw_A Oxygenase; mithramycin, 96.7 0.00093 3.2E-08 68.3 4.5 35 206-240 50-84 (570)
335 3atr_A Conserved archaeal prot 96.7 0.0012 4.1E-08 65.5 5.2 33 207-239 8-40 (453)
336 3ps9_A TRNA 5-methylaminomethy 96.7 0.0026 8.7E-08 66.5 7.9 33 206-238 273-305 (676)
337 3nyc_A D-arginine dehydrogenas 96.7 0.0012 4.1E-08 63.5 4.6 32 206-238 10-41 (381)
338 3fim_B ARYL-alcohol oxidase; A 96.6 0.00075 2.6E-08 68.7 2.7 36 12-47 2-38 (566)
339 1y56_B Sarcosine oxidase; dehy 96.6 0.0033 1.1E-07 60.5 7.0 33 206-238 6-38 (382)
340 2r0c_A REBC; flavin adenine di 96.6 0.0031 1.1E-07 64.1 7.0 35 206-240 27-61 (549)
341 4gde_A UDP-galactopyranose mut 96.6 0.0028 9.5E-08 63.7 6.5 35 206-240 11-46 (513)
342 3oz2_A Digeranylgeranylglycero 96.5 0.0034 1.2E-07 60.5 6.8 34 207-240 6-39 (397)
343 1qo8_A Flavocytochrome C3 fuma 96.5 0.0041 1.4E-07 63.5 7.6 34 206-239 122-155 (566)
344 3ihg_A RDME; flavoenzyme, anth 96.5 0.0028 9.7E-08 64.2 6.3 35 206-240 6-40 (535)
345 3pvc_A TRNA 5-methylaminomethy 96.5 0.0047 1.6E-07 64.7 8.0 33 206-238 265-297 (689)
346 2gag_B Heterotetrameric sarcos 96.5 0.0053 1.8E-07 59.5 7.8 33 206-238 22-56 (405)
347 4b63_A L-ornithine N5 monooxyg 96.4 0.01 3.6E-07 59.5 9.6 36 11-46 245-282 (501)
348 1y0p_A Fumarate reductase flav 96.3 0.0068 2.3E-07 62.0 7.6 35 206-240 127-161 (571)
349 3dfz_A SIRC, precorrin-2 dehyd 96.2 0.0041 1.4E-07 54.9 4.6 77 202-291 28-104 (223)
350 2g1u_A Hypothetical protein TM 96.1 0.0062 2.1E-07 50.5 5.0 34 12-45 19-52 (155)
351 3fwz_A Inner membrane protein 96.1 0.0071 2.4E-07 49.2 5.3 34 12-45 7-40 (140)
352 3kkj_A Amine oxidase, flavin-c 96.1 0.0033 1.1E-07 56.8 3.6 34 207-240 4-37 (336)
353 1id1_A Putative potassium chan 96.0 0.0084 2.9E-07 49.6 5.6 33 12-44 3-35 (153)
354 2dkh_A 3-hydroxybenzoate hydro 96.0 0.0083 2.8E-07 62.2 6.5 35 206-240 33-68 (639)
355 3llv_A Exopolyphosphatase-rela 96.0 0.0081 2.8E-07 48.8 5.1 33 13-45 7-39 (141)
356 3jsk_A Cypbp37 protein; octame 95.9 0.009 3.1E-07 56.4 5.7 35 206-240 80-116 (344)
357 4gut_A Lysine-specific histone 95.9 0.023 8E-07 59.9 9.4 35 204-238 335-369 (776)
358 1lss_A TRK system potassium up 95.9 0.0083 2.8E-07 48.4 4.8 33 13-45 5-37 (140)
359 3ic5_A Putative saccharopine d 95.7 0.0087 3E-07 46.7 4.3 33 13-45 6-39 (118)
360 3fbt_A Chorismate mutase and s 95.7 0.024 8.3E-07 51.9 7.5 150 202-377 119-276 (282)
361 3lk7_A UDP-N-acetylmuramoylala 95.5 0.011 3.9E-07 58.3 5.1 81 202-295 6-89 (451)
362 1d4d_A Flavocytochrome C fumar 95.4 0.021 7.2E-07 58.3 6.6 35 206-240 127-161 (572)
363 2hmt_A YUAA protein; RCK, KTN, 95.3 0.017 5.7E-07 46.8 4.7 33 13-45 7-39 (144)
364 3dfz_A SIRC, precorrin-2 dehyd 95.2 0.018 6.2E-07 50.7 4.9 34 11-44 30-63 (223)
365 2g1u_A Hypothetical protein TM 95.2 0.016 5.6E-07 47.9 4.2 43 198-240 12-54 (155)
366 4dgk_A Phytoene dehydrogenase; 95.1 0.0081 2.8E-07 60.2 2.6 35 206-240 2-36 (501)
367 3c85_A Putative glutathione-re 95.1 0.022 7.6E-07 48.5 5.0 34 12-45 39-73 (183)
368 4e12_A Diketoreductase; oxidor 95.1 0.021 7.2E-07 52.5 5.0 33 13-45 5-37 (283)
369 1kyq_A Met8P, siroheme biosynt 94.9 0.019 6.4E-07 52.3 4.1 35 11-45 12-46 (274)
370 3qha_A Putative oxidoreductase 94.8 0.02 6.9E-07 53.1 4.2 37 9-45 12-48 (296)
371 4dio_A NAD(P) transhydrogenase 94.7 0.03 1E-06 53.9 5.1 35 11-45 189-223 (405)
372 3lk7_A UDP-N-acetylmuramoylala 94.6 0.028 9.7E-07 55.5 4.9 35 11-45 8-42 (451)
373 3ihm_A Styrene monooxygenase A 94.6 0.017 6E-07 56.6 3.3 33 206-238 23-55 (430)
374 2x5o_A UDP-N-acetylmuramoylala 94.6 0.021 7.3E-07 56.1 3.9 34 12-45 5-38 (439)
375 3l4b_C TRKA K+ channel protien 94.5 0.03 1E-06 49.2 4.3 32 14-45 2-33 (218)
376 3p2y_A Alanine dehydrogenase/p 94.4 0.032 1.1E-06 53.2 4.6 35 11-45 183-217 (381)
377 1zej_A HBD-9, 3-hydroxyacyl-CO 94.4 0.034 1.2E-06 51.3 4.6 44 1-45 1-44 (293)
378 1pzg_A LDH, lactate dehydrogen 94.2 0.042 1.4E-06 51.8 4.8 33 13-45 10-43 (331)
379 2a9f_A Putative malic enzyme ( 94.2 0.043 1.5E-06 52.3 4.8 34 11-44 187-221 (398)
380 2iid_A L-amino-acid oxidase; f 94.1 0.033 1.1E-06 55.6 4.3 36 205-240 33-68 (498)
381 2ewd_A Lactate dehydrogenase,; 94.1 0.046 1.6E-06 51.2 5.0 34 12-45 4-38 (317)
382 3nrn_A Uncharacterized protein 94.1 0.035 1.2E-06 54.1 4.3 35 206-240 1-35 (421)
383 3c4a_A Probable tryptophan hyd 94.1 0.035 1.2E-06 53.3 4.2 35 206-240 1-37 (381)
384 1bg6_A N-(1-D-carboxylethyl)-L 94.0 0.044 1.5E-06 52.1 4.8 33 13-45 5-37 (359)
385 1vl6_A Malate oxidoreductase; 94.0 0.048 1.7E-06 51.8 4.8 34 11-44 191-225 (388)
386 3q2o_A Phosphoribosylaminoimid 93.9 0.057 2E-06 52.1 5.4 37 9-45 11-47 (389)
387 1kyq_A Met8P, siroheme biosynt 93.8 0.039 1.3E-06 50.2 3.6 36 203-238 11-46 (274)
388 1t2d_A LDH-P, L-lactate dehydr 93.8 0.064 2.2E-06 50.3 5.3 34 12-45 4-38 (322)
389 3g5s_A Methylenetetrahydrofola 93.7 0.037 1.3E-06 53.0 3.4 33 206-238 2-34 (443)
390 3ka7_A Oxidoreductase; structu 93.7 0.042 1.5E-06 53.5 4.1 35 206-240 1-35 (425)
391 1x13_A NAD(P) transhydrogenase 93.6 0.057 2E-06 52.3 4.8 34 12-45 172-205 (401)
392 3g79_A NDP-N-acetyl-D-galactos 93.6 0.062 2.1E-06 53.1 5.0 38 9-46 15-54 (478)
393 4ffl_A PYLC; amino acid, biosy 93.5 0.07 2.4E-06 50.9 5.2 34 13-46 2-35 (363)
394 1f0y_A HCDH, L-3-hydroxyacyl-C 93.5 0.073 2.5E-06 49.4 5.1 34 12-45 15-48 (302)
395 1ryi_A Glycine oxidase; flavop 93.5 0.041 1.4E-06 52.7 3.4 33 206-238 18-50 (382)
396 1l7d_A Nicotinamide nucleotide 93.4 0.071 2.4E-06 51.3 5.1 35 11-45 171-205 (384)
397 2raf_A Putative dinucleotide-b 93.4 0.081 2.8E-06 46.1 4.9 35 12-46 19-53 (209)
398 3k7m_X 6-hydroxy-L-nicotine ox 93.3 0.049 1.7E-06 53.2 3.7 33 207-239 3-35 (431)
399 3ado_A Lambda-crystallin; L-gu 93.3 0.076 2.6E-06 49.5 4.7 34 12-45 6-39 (319)
400 3oj0_A Glutr, glutamyl-tRNA re 93.3 0.033 1.1E-06 45.4 2.1 34 12-45 21-54 (144)
401 2oln_A NIKD protein; flavoprot 93.3 0.048 1.7E-06 52.6 3.6 33 206-238 5-37 (397)
402 2e1m_A L-glutamate oxidase; L- 93.3 0.074 2.5E-06 51.0 4.8 37 204-240 43-80 (376)
403 3doj_A AT3G25530, dehydrogenas 93.3 0.079 2.7E-06 49.3 4.9 35 11-45 20-54 (310)
404 3vtf_A UDP-glucose 6-dehydroge 93.3 0.076 2.6E-06 51.8 4.9 34 12-45 21-54 (444)
405 3eag_A UDP-N-acetylmuramate:L- 93.2 0.084 2.9E-06 49.6 5.0 34 12-45 4-38 (326)
406 3nks_A Protoporphyrinogen oxid 93.2 0.054 1.9E-06 53.6 3.9 35 206-240 3-39 (477)
407 2b9w_A Putative aminooxidase; 93.2 0.056 1.9E-06 52.6 3.9 36 205-240 6-42 (424)
408 3i83_A 2-dehydropantoate 2-red 93.1 0.086 2.9E-06 49.4 4.9 33 13-45 3-35 (320)
409 1ks9_A KPA reductase;, 2-dehyd 93.1 0.091 3.1E-06 48.2 5.0 32 14-45 2-33 (291)
410 2uzz_A N-methyl-L-tryptophan o 93.1 0.043 1.5E-06 52.4 2.8 33 206-238 3-35 (372)
411 1pjc_A Protein (L-alanine dehy 93.1 0.091 3.1E-06 50.1 5.1 34 12-45 167-200 (361)
412 2uyy_A N-PAC protein; long-cha 93.1 0.091 3.1E-06 49.0 5.0 34 12-45 30-63 (316)
413 2gf3_A MSOX, monomeric sarcosi 93.0 0.056 1.9E-06 51.8 3.6 33 206-238 4-36 (389)
414 3i6d_A Protoporphyrinogen oxid 93.0 0.048 1.7E-06 53.8 3.2 35 206-240 6-46 (470)
415 2y0c_A BCEC, UDP-glucose dehyd 92.9 0.084 2.9E-06 52.4 4.8 34 12-45 8-41 (478)
416 2jae_A L-amino acid oxidase; o 92.9 0.075 2.6E-06 52.9 4.5 36 205-240 11-46 (489)
417 3ghy_A Ketopantoate reductase 92.9 0.1 3.4E-06 49.3 5.1 32 13-44 4-35 (335)
418 4e21_A 6-phosphogluconate dehy 92.9 0.092 3.1E-06 50.0 4.8 37 9-45 19-55 (358)
419 2dpo_A L-gulonate 3-dehydrogen 92.7 0.1 3.5E-06 48.8 4.7 34 12-45 6-39 (319)
420 3tl2_A Malate dehydrogenase; c 92.7 0.11 3.8E-06 48.4 5.0 34 11-44 7-41 (315)
421 1c0p_A D-amino acid oxidase; a 92.7 0.073 2.5E-06 50.6 3.8 32 206-237 7-38 (363)
422 3gpi_A NAD-dependent epimerase 92.7 0.13 4.4E-06 47.0 5.4 33 13-45 4-36 (286)
423 3hn2_A 2-dehydropantoate 2-red 92.6 0.094 3.2E-06 48.9 4.4 33 13-45 3-35 (312)
424 3k96_A Glycerol-3-phosphate de 92.6 0.11 3.6E-06 49.5 4.8 34 12-45 29-62 (356)
425 3phh_A Shikimate dehydrogenase 92.6 0.13 4.4E-06 46.7 5.1 34 12-45 118-151 (269)
426 3dhn_A NAD-dependent epimerase 92.6 0.081 2.8E-06 46.4 3.8 33 13-45 5-38 (227)
427 1lld_A L-lactate dehydrogenase 92.6 0.11 3.7E-06 48.5 4.8 33 13-45 8-42 (319)
428 1jw9_B Molybdopterin biosynthe 92.5 0.11 3.6E-06 46.8 4.5 34 12-45 31-65 (249)
429 3ius_A Uncharacterized conserv 92.5 0.1 3.6E-06 47.6 4.5 33 13-45 6-38 (286)
430 2ew2_A 2-dehydropantoate 2-red 92.5 0.11 3.7E-06 48.3 4.7 33 13-45 4-36 (316)
431 3gg2_A Sugar dehydrogenase, UD 92.4 0.1 3.6E-06 51.2 4.7 33 13-45 3-35 (450)
432 2bi7_A UDP-galactopyranose mut 92.4 0.087 3E-06 50.7 4.0 36 206-241 4-39 (384)
433 3eag_A UDP-N-acetylmuramate:L- 92.4 0.11 3.9E-06 48.7 4.7 76 205-296 4-84 (326)
434 1id1_A Putative potassium chan 92.3 0.1 3.5E-06 42.8 3.9 34 205-238 3-36 (153)
435 3cky_A 2-hydroxymethyl glutara 92.3 0.11 3.8E-06 48.0 4.5 33 13-45 5-37 (301)
436 1rsg_A FMS1 protein; FAD bindi 92.3 0.077 2.6E-06 53.3 3.6 35 206-240 9-44 (516)
437 4e4t_A Phosphoribosylaminoimid 92.3 0.14 4.7E-06 50.0 5.3 35 11-45 34-68 (419)
438 2eez_A Alanine dehydrogenase; 92.3 0.13 4.6E-06 49.1 5.1 34 12-45 166-199 (369)
439 3dtt_A NADP oxidoreductase; st 92.2 0.14 4.8E-06 45.8 4.9 34 12-45 19-52 (245)
440 1nyt_A Shikimate 5-dehydrogena 92.2 0.14 4.7E-06 46.7 5.0 34 12-45 119-152 (271)
441 3g3e_A D-amino-acid oxidase; F 92.2 0.085 2.9E-06 49.9 3.7 32 207-238 2-39 (351)
442 2q3e_A UDP-glucose 6-dehydroge 92.2 0.1 3.6E-06 51.6 4.4 33 13-45 6-40 (467)
443 2bcg_G Secretory pathway GDP d 92.2 0.08 2.7E-06 52.2 3.5 35 206-240 12-46 (453)
444 1pjq_A CYSG, siroheme synthase 92.1 0.12 4E-06 51.1 4.6 35 11-45 11-45 (457)
445 2vhw_A Alanine dehydrogenase; 92.1 0.14 4.8E-06 49.1 5.1 35 11-45 167-201 (377)
446 2ivd_A PPO, PPOX, protoporphyr 92.1 0.079 2.7E-06 52.5 3.4 36 205-240 16-51 (478)
447 3orq_A N5-carboxyaminoimidazol 92.1 0.17 5.7E-06 48.6 5.6 36 11-46 11-46 (377)
448 3hdq_A UDP-galactopyranose mut 92.1 0.098 3.4E-06 50.5 3.9 36 206-241 30-65 (397)
449 3g17_A Similar to 2-dehydropan 92.1 0.13 4.3E-06 47.6 4.5 33 13-45 3-35 (294)
450 2vns_A Metalloreductase steap3 92.0 0.16 5.6E-06 44.4 5.0 34 12-45 28-61 (215)
451 1s3e_A Amine oxidase [flavin-c 92.0 0.08 2.7E-06 53.2 3.4 35 206-240 5-39 (520)
452 3ic5_A Putative saccharopine d 92.0 0.094 3.2E-06 40.5 3.1 36 204-239 4-40 (118)
453 3pef_A 6-phosphogluconate dehy 92.0 0.14 4.6E-06 47.1 4.6 33 13-45 2-34 (287)
454 3l9w_A Glutathione-regulated p 92.0 0.15 5.2E-06 49.5 5.1 35 12-46 4-38 (413)
455 2v6b_A L-LDH, L-lactate dehydr 92.0 0.14 4.8E-06 47.5 4.7 32 14-45 2-35 (304)
456 4huj_A Uncharacterized protein 91.9 0.083 2.8E-06 46.5 3.0 34 12-45 23-57 (220)
457 3pqe_A L-LDH, L-lactate dehydr 91.8 0.16 5.4E-06 47.6 4.9 34 12-45 5-40 (326)
458 1sez_A Protoporphyrinogen oxid 91.8 0.12 4E-06 51.6 4.3 36 205-240 13-48 (504)
459 3e8x_A Putative NAD-dependent 91.8 0.16 5.5E-06 44.9 4.8 35 11-45 20-55 (236)
460 1z82_A Glycerol-3-phosphate de 91.8 0.15 5.2E-06 47.9 4.8 34 12-45 14-47 (335)
461 3c4n_A Uncharacterized protein 91.8 0.1 3.4E-06 50.6 3.6 33 206-238 37-71 (405)
462 2hjr_A Malate dehydrogenase; m 91.7 0.18 6.2E-06 47.3 5.2 33 13-45 15-48 (328)
463 3g0o_A 3-hydroxyisobutyrate de 91.7 0.16 5.5E-06 47.0 4.8 33 13-45 8-40 (303)
464 1hdo_A Biliverdin IX beta redu 91.7 0.18 6.2E-06 43.2 4.9 33 13-45 4-37 (206)
465 2yg5_A Putrescine oxidase; oxi 91.7 0.11 3.8E-06 51.0 3.9 35 206-240 6-40 (453)
466 2aqj_A Tryptophan halogenase, 91.7 0.11 3.8E-06 52.5 3.9 33 206-238 6-41 (538)
467 1y6j_A L-lactate dehydrogenase 91.7 0.17 5.9E-06 47.2 4.9 34 12-45 7-42 (318)
468 2egg_A AROE, shikimate 5-dehyd 91.6 0.16 5.6E-06 46.9 4.6 34 12-45 141-175 (297)
469 4a7p_A UDP-glucose dehydrogena 91.5 0.18 6E-06 49.5 5.0 35 12-46 8-42 (446)
470 3dje_A Fructosyl amine: oxygen 91.5 0.1 3.4E-06 51.1 3.3 34 206-239 7-41 (438)
471 3gvi_A Malate dehydrogenase; N 91.5 0.2 6.8E-06 46.8 5.2 34 12-45 7-41 (324)
472 1i8t_A UDP-galactopyranose mut 91.5 0.13 4.3E-06 49.2 3.9 34 207-240 3-36 (367)
473 3pdu_A 3-hydroxyisobutyrate de 91.4 0.15 5E-06 46.9 4.2 33 13-45 2-34 (287)
474 3l6d_A Putative oxidoreductase 91.4 0.2 7E-06 46.4 5.2 34 12-45 9-42 (306)
475 1mv8_A GMD, GDP-mannose 6-dehy 91.4 0.14 4.9E-06 50.1 4.3 32 14-45 2-33 (436)
476 2gjc_A Thiazole biosynthetic e 91.4 0.12 3.9E-06 48.4 3.5 34 207-240 67-102 (326)
477 3k5i_A Phosphoribosyl-aminoimi 91.4 0.19 6.6E-06 48.6 5.2 36 9-45 21-56 (403)
478 2h78_A Hibadh, 3-hydroxyisobut 91.4 0.16 5.5E-06 47.0 4.5 33 13-45 4-36 (302)
479 4dll_A 2-hydroxy-3-oxopropiona 91.4 0.17 6E-06 47.2 4.7 34 12-45 31-64 (320)
480 2e4g_A Tryptophan halogenase; 91.3 0.14 4.7E-06 51.9 4.3 34 205-238 25-61 (550)
481 2x4g_A Nucleoside-diphosphate- 91.3 0.21 7.1E-06 46.8 5.3 34 12-45 13-47 (342)
482 3fpz_A Thiazole biosynthetic e 91.3 0.12 4.2E-06 48.3 3.7 37 204-240 64-102 (326)
483 3d4o_A Dipicolinate synthase s 91.3 0.21 7E-06 46.1 5.1 35 11-45 154-188 (293)
484 2rir_A Dipicolinate synthase, 91.3 0.21 7.1E-06 46.2 5.1 35 11-45 156-190 (300)
485 1p77_A Shikimate 5-dehydrogena 91.3 0.15 5.1E-06 46.5 4.1 34 12-45 119-152 (272)
486 2aef_A Calcium-gated potassium 91.3 0.078 2.7E-06 47.1 2.1 34 11-45 8-41 (234)
487 1v0j_A UDP-galactopyranose mut 91.3 0.11 3.9E-06 50.2 3.4 36 206-241 8-44 (399)
488 4id9_A Short-chain dehydrogena 91.3 0.19 6.6E-06 47.2 5.0 35 12-46 19-54 (347)
489 1lss_A TRK system potassium up 91.3 0.13 4.6E-06 41.0 3.4 35 205-239 4-38 (140)
490 3k6j_A Protein F01G10.3, confi 91.3 0.19 6.6E-06 49.2 5.0 34 12-45 54-87 (460)
491 3lov_A Protoporphyrinogen oxid 91.3 0.13 4.6E-06 50.8 4.0 35 206-240 5-41 (475)
492 3i6i_A Putative leucoanthocyan 91.3 0.2 7E-06 47.1 5.1 34 12-45 10-44 (346)
493 3vps_A TUNA, NAD-dependent epi 91.3 0.2 6.8E-06 46.4 5.0 35 12-46 7-42 (321)
494 3pid_A UDP-glucose 6-dehydroge 91.3 0.17 5.7E-06 49.3 4.5 33 12-45 36-68 (432)
495 2qcu_A Aerobic glycerol-3-phos 91.2 0.11 3.6E-06 52.1 3.2 33 206-238 4-36 (501)
496 3llv_A Exopolyphosphatase-rela 91.2 0.11 3.9E-06 41.8 2.9 35 205-239 6-40 (141)
497 2weu_A Tryptophan 5-halogenase 91.1 0.11 3.6E-06 52.2 3.1 33 206-238 3-38 (511)
498 2hmt_A YUAA protein; RCK, KTN, 91.1 0.12 4.1E-06 41.5 2.9 35 204-238 5-39 (144)
499 3ew7_A LMO0794 protein; Q8Y8U8 91.0 0.23 7.9E-06 43.1 4.9 32 14-45 2-34 (221)
500 1zcj_A Peroxisomal bifunctiona 91.0 0.19 6.4E-06 49.7 4.7 34 12-45 37-70 (463)
No 1
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=100.00 E-value=5.2e-59 Score=469.47 Aligned_cols=398 Identities=26% Similarity=0.481 Sum_probs=337.5
Q ss_pred CcEEEECcChHHHHHHHHHHH---cCCc---EEEEeeCCCCCcccccCCCCCCC----CccccccccceecCCccccccC
Q 044575 13 KNVCVIGAGPSGLVAARELRK---EGHR---VVVLEQNHDVGGQWLYDPNTDQT----EVHSSVYASLRLTSPREIMGYT 82 (454)
Q Consensus 13 ~~VvIIGaG~aGl~aA~~l~~---~g~~---v~vie~~~~~GG~w~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 82 (454)
+||+|||||+||++||+.|++ .|.+ |+|||+++.+||+|.+....... ...+.+|..+..+.++..+.|+
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~~ 82 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEFA 82 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCBT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcccC
Confidence 689999999999999999999 9999 99999999999999986433211 3456789999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEE
Q 044575 83 DFPFVLKKGRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEV 162 (454)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 162 (454)
+++++...+...+.|+++.++.+|+.++++++++..+++++++|++|+..++.+ .|+|++.++.++...++.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~--------~~~V~~~~~~~g~~~~~~ 154 (464)
T 2xve_A 83 DYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQ--------TFTVTVQDHTTDTIYSEE 154 (464)
T ss_dssp TBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTT--------EEEEEEEETTTTEEEEEE
T ss_pred CCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCC--------cEEEEEEEcCCCceEEEE
Confidence 998875322244788999999999999999999988899999999999875432 799998875334445789
Q ss_pred eCEEEEccCCCCCCCCCCCCCcCCccceeEEeecCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCcCc
Q 044575 163 FDAVVVATGHYSYPRLPSIKGMDKWKRKQMHSHIYRVPEPFRNEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNISE 242 (454)
Q Consensus 163 ~d~vViAtG~~~~p~~p~i~G~~~~~~~~~~~~~~~~~~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~~~ 242 (454)
||+||+|||+++.|++|.+||++.|.+.++|++.++.+..+.+|+|+|||+|.||+|+|.+|++.+++|+++.|++.+.+
T Consensus 155 ~d~VVvAtG~~s~p~~p~ipG~~~~~g~~~hs~~~~~~~~~~~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~~~ 234 (464)
T 2xve_A 155 FDYVVCCTGHFSTPYVPEFEGFEKFGGRILHAHDFRDALEFKDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAPMG 234 (464)
T ss_dssp ESEEEECCCSSSSBCCCCCBTTTTCCSEEEEGGGCCCGGGGTTSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCCCC
T ss_pred cCEEEECCCCCCCCccCCCCCcccCCceEEehhhhCCHhHcCCCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCCCC
Confidence 99999999999999999999999999999999999988888999999999999999999999999999999999876533
Q ss_pred cchhhhccCCCeEEcCceeEEecCCcEEEeCCCEEeeceEEEccCcccCCcCCCCCCceeeCCC-CcccccCcccCCCCC
Q 044575 243 GLSKVISKHNNLHLHPQIDCLREDGRVTFVDGCWVTADTILYCTGYSYSFPFLDTKGIVVVDDD-RVGPLYEHTFPPSLA 321 (454)
Q Consensus 243 ~~~~~l~~~~~i~~~~~v~~v~~~~~v~~~dG~~i~~D~vI~atG~~~~~~~l~~~g~i~v~~~-~~~~~~~~~~~~~~~ 321 (454)
.. +. .++...+.|+++.++ .|+|.||+++++|.||+|||++|+++||++...+.+++. .+.++|++++.+. .
T Consensus 235 ~~---~~--~~V~~~~~V~~i~~~-~V~~~dG~~i~~D~Vi~atG~~p~~~~l~~~~gl~~~~~~~v~~~~~~~~~t~-~ 307 (464)
T 2xve_A 235 YK---WP--ENWDERPNLVRVDTE-NAYFADGSSEKVDAIILCTGYIHHFPFLNDDLRLVTNNRLWPLNLYKGVVWED-N 307 (464)
T ss_dssp CC---CC--TTEEECSCEEEECSS-EEEETTSCEEECSEEEECCCBCCCCTTBCTTTCCCCCSSSCCSSEETTTEESS-S
T ss_pred CC---CC--CceEEcCCeEEEeCC-EEEECCCCEEeCCEEEECCCCCCCCCCcCcccccccCCCcccccccceEecCC-C
Confidence 21 11 245555889999765 599999999999999999999999999986444666665 4457899888864 7
Q ss_pred CCceEecccccccchhHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhhhhhcCC--CCCcccccccHHHHHHHHHHc
Q 044575 322 PSLSFVGIPRKLIGFPFFESQAKWIAQLLSGKRTLPSWDQMMQSVKEFYHSRDVAGI--PKHNTHDIANFEYCDRYADQI 399 (454)
Q Consensus 322 p~l~~iG~~~~~~~~~~a~~qa~~~a~~i~g~~~lp~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~y~~~l~~~~ 399 (454)
|+|||+|++.....++.|+.||+|+|++|+|+..||+.++|++++..+.+. ..++ +.++.|. ++.|+|+|++++
T Consensus 308 p~i~aiGd~~~~~~~~~a~~qa~~~a~~l~G~~~lP~~~~m~~~~~~~~~~--~~~~~~~~~~~~~--~~~Y~~~l~~~~ 383 (464)
T 2xve_A 308 PKFFYIGMQDQWYSFNMFDAQAWYARDVIMGRLPLPSKEEMKADSMAWREK--ELTLVTAEEMYTY--QGDYIQNLIDMT 383 (464)
T ss_dssp TTEEECSCSCCSSCHHHHHHHHHHHHHHHTTSSCCCCHHHHHHHHHHHHHH--HHTCCSHHHHHHH--HHHHHHHHHTTS
T ss_pred CCEEEEeCcccccchHHHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHHH--hhccCCCCCcccc--HHHHHHHHHHHc
Confidence 999999999887788999999999999999999999999999999887662 3344 2344443 579999999999
Q ss_pred CCCCc-hHHHHHHHHHHhhCCccccccccCC
Q 044575 400 GFPHL-EEWRKGLCISALVNSDANLETYRDS 429 (454)
Q Consensus 400 g~~~~-~~~~~~l~~~~~~~~~~~~~~~r~~ 429 (454)
|++++ ++|+++++..+...+..++..||+.
T Consensus 384 g~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 414 (464)
T 2xve_A 384 DYPSFDIPATNKTFLEWKHHKKENIMTFRDH 414 (464)
T ss_dssp SSCCCCHHHHHHHHHHHHHHHHHCTTTGGGC
T ss_pred CCCCCChHHHHHHHHHHHHHHHhchhhhccc
Confidence 99988 7789999999998888999999987
No 2
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=100.00 E-value=4e-53 Score=425.63 Aligned_cols=364 Identities=32% Similarity=0.549 Sum_probs=303.7
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCC--cEEEEeeCCCCCcccccCCCCCC----------------------CCccccc
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGH--RVVVLEQNHDVGGQWLYDPNTDQ----------------------TEVHSSV 66 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~--~v~vie~~~~~GG~w~~~~~~~~----------------------~~~~~~~ 66 (454)
..+||+|||||++|+++|+.|++.|. +|+|||+++.+||.|.+..+... ....+.+
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~~ 84 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSPL 84 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCCC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCch
Confidence 35899999999999999999999999 99999999999999998765321 0113577
Q ss_pred cccceecCCccccccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcE
Q 044575 67 YASLRLTSPREIMGYTDFPFVLKKGRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKW 146 (454)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~ 146 (454)
|..+..+.++..+.|++++++. ..+.|+++.++.+|+.+++++++.. ++++++|++|+..++ .|
T Consensus 85 ~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~l~~~~~~~~~~--i~~~t~V~~v~~~~~----------~~ 148 (447)
T 2gv8_A 85 YRDLQTNTPIELMGYCDQSFKP----QTLQFPHRHTIQEYQRIYAQPLLPF--IKLATDVLDIEKKDG----------SW 148 (447)
T ss_dssp CTTCBCSSCHHHHSCTTCCCCT----TCCSSCBHHHHHHHHHHHHGGGGGG--EECSEEEEEEEEETT----------EE
T ss_pred hhhhccCCCHHHhccCCCCCCC----CCCCCCCHHHHHHHHHHHHHHhhCe--EEeCCEEEEEEeCCC----------eE
Confidence 8889999999999999999887 6778999999999999999988554 899999999987542 79
Q ss_pred EEEEeecCCCe-EEEEEeCEEEEccCCCCCCCCCCCCCcCCc----cceeEEeecCCCCCCCCCCeEEEEcCCCCHHHHH
Q 044575 147 VVKSKEKKADK-VVEEVFDAVVVATGHYSYPRLPSIKGMDKW----KRKQMHSHIYRVPEPFRNEVVVVVGNSLSGQDIS 221 (454)
Q Consensus 147 ~v~~~~~~~~~-~~~~~~d~vViAtG~~~~p~~p~i~G~~~~----~~~~~~~~~~~~~~~~~~k~vvVVG~G~sg~e~A 221 (454)
+|++.+..++. ..++.||+||+|||+++.|++|.+||++.+ .+.++|++.++++..+++++|+|||+|.||+|+|
T Consensus 149 ~V~~~~~~~G~~~~~~~~d~VVvAtG~~s~p~~p~i~G~~~~~~~~~g~v~~~~~~~~~~~~~~k~VvVvG~G~sg~e~A 228 (447)
T 2gv8_A 149 VVTYKGTKAGSPISKDIFDAVSICNGHYEVPYIPNIKGLDEYAKAVPGSVLHSSLFREPELFVGESVLVVGGASSANDLV 228 (447)
T ss_dssp EEEEEESSTTCCEEEEEESEEEECCCSSSSBCBCCCBTHHHHHHHSTTSEEEGGGCCCGGGGTTCCEEEECSSHHHHHHH
T ss_pred EEEEeecCCCCeeEEEEeCEEEECCCCCCCCCCCCCCChhhhhccCCccEEEecccCChhhcCCCEEEEEccCcCHHHHH
Confidence 99987632233 346899999999998889999999998764 5678999999988888999999999999999999
Q ss_pred HHHhhhcCe-EEEecccCCcCccchhhhccCCCeEEcCceeEEecC-CcEEEeCCCE-EeeceEEEccCcccCCcC----
Q 044575 222 MELVEVAKE-VHLSAKSLNISEGLSKVISKHNNLHLHPQIDCLRED-GRVTFVDGCW-VTADTILYCTGYSYSFPF---- 294 (454)
Q Consensus 222 ~~l~~~~~~-V~l~~r~~~~~~~~~~~l~~~~~i~~~~~v~~v~~~-~~v~~~dG~~-i~~D~vI~atG~~~~~~~---- 294 (454)
.+|++.+++ |+++.|++.+ + ...++...+.|+++..+ +.|+|.||++ +++|.||+||||+|+++|
T Consensus 229 ~~l~~~~~~~V~l~~r~~~~-------l-~~~~i~~~~~v~~~~~~~~~v~~~dG~~~~~~D~vi~atG~~~~~~~l~~~ 300 (447)
T 2gv8_A 229 RHLTPVAKHPIYQSLLGGGD-------I-QNESLQQVPEITKFDPTTREIYLKGGKVLSNIDRVIYCTGYLYSVPFPSLA 300 (447)
T ss_dssp HHHTTTSCSSEEEECTTCCS-------C-BCSSEEEECCEEEEETTTTEEEETTTEEECCCSEEEECCCBCCCCCCHHHH
T ss_pred HHHHHHhCCcEEEEeCCCCc-------C-CCCCeEEecCeEEEecCCCEEEECCCCEeccCCEEEECCCCCcCCCCCccc
Confidence 999999999 9999998765 1 22356678899999633 4799999987 689999999999999999
Q ss_pred -CCC-CCceeeCCCCcccccCcccCCCCCCCceEecccccccchhHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhh
Q 044575 295 -LDT-KGIVVVDDDRVGPLYEHTFPPSLAPSLSFVGIPRKLIGFPFFESQAKWIAQLLSGKRTLPSWDQMMQSVKEFYHS 372 (454)
Q Consensus 295 -l~~-~g~i~v~~~~~~~~~~~~~~~~~~p~l~~iG~~~~~~~~~~a~~qa~~~a~~i~g~~~lp~~~~~~~~~~~~~~~ 372 (454)
|+. .+.+.+|++...++|+++|++ .+|++||+|++.....++.|+.||+|+|++|+|+.+||+.++|++++.+..+.
T Consensus 301 ~l~~~~~~i~~~~~~~~~~~~~v~~~-~~p~l~~~G~~~~~~~~~~a~~qa~~~a~~~~g~~~lp~~~~m~~~~~~~~~~ 379 (447)
T 2gv8_A 301 KLKSPETKLIDDGSHVHNVYQHIFYI-PDPTLAFVGLALHVVPFPTSQAQAAFLARVWSGRLKLPSKEEQLKWQDELMFS 379 (447)
T ss_dssp SCCSTTTCCCSSSSSCCSEETTTEET-TCTTEEESSCCBSSCHHHHHHHHHHHHHHHHTTSSCCCCHHHHHHHHHHHHHH
T ss_pred ccccccCceecCCCcccccccccccC-CCCcEEEEeccccccCchHHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHHH
Confidence 875 345667777777899999986 47999999999987788999999999999999999999999999998876543
Q ss_pred hhhcCCCCCccccc---ccHHHHHHHHHHcCCC
Q 044575 373 RDVAGIPKHNTHDI---ANFEYCDRYADQIGFP 402 (454)
Q Consensus 373 ~~~~~~~~~~~~~~---~~~~y~~~l~~~~g~~ 402 (454)
+ .+.+ +..|.+ .+..|+++|+..++..
T Consensus 380 ~--~~~~-~~~~~~~~~~~~~y~~~l~~~~~~~ 409 (447)
T 2gv8_A 380 L--SGAN-NMYHSLDYPKDATYINKLHDWCKQA 409 (447)
T ss_dssp H--TTCG-GGTTBCTTTHHHHHHHHHHHHHHTC
T ss_pred h--cCCC-cceeecCCccHHHHHHHHHHHhCcc
Confidence 2 1222 222443 3579999999977653
No 3
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=2e-40 Score=322.95 Aligned_cols=299 Identities=25% Similarity=0.360 Sum_probs=240.1
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKKG 91 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (454)
.+||+|||||++|+++|..|++.|++|+|||+++.+||.|.+ .|+.+..+.+...+.+++++++.
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~------------~~~~~~~~~~~~~~~~~~~~~~~--- 67 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQH------------AWHSLHLFSPAGWSSIPGWPMPA--- 67 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGG------------SCTTCBCSSCGGGSCCSSSCCCC---
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccC------------CCCCcEecCchhhhhCCCCCCCC---
Confidence 379999999999999999999999999999999999999984 35666677777778888877775
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEE-EEEeecCCCeEEEEEeCEEEEcc
Q 044575 92 RDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWV-VKSKEKKADKVVEEVFDAVVVAT 170 (454)
Q Consensus 92 ~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~d~vViAt 170 (454)
....|+++.++.+|+.++++++++. ++++++|++++..++ .|. |++.++ ++.||+||+||
T Consensus 68 -~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~v~~i~~~~~----------~~~~v~~~~g------~~~~d~vV~At 128 (357)
T 4a9w_A 68 -SQGPYPARAEVLAYLAQYEQKYALP--VLRPIRVQRVSHFGE----------RLRVVARDGR------QWLARAVISAT 128 (357)
T ss_dssp -CSSSSCBHHHHHHHHHHHHHHTTCC--EECSCCEEEEEEETT----------EEEEEETTSC------EEEEEEEEECC
T ss_pred -CccCCCCHHHHHHHHHHHHHHcCCE--EEcCCEEEEEEECCC----------cEEEEEeCCC------EEEeCEEEECC
Confidence 6778899999999999999999988 999999999987643 677 765442 78999999999
Q ss_pred CCCCCCCCCCCCCcCCccceeEEeecCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccC-CcCccc-----
Q 044575 171 GHYSYPRLPSIKGMDKWKRKQMHSHIYRVPEPFRNEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSL-NISEGL----- 244 (454)
Q Consensus 171 G~~~~p~~p~i~G~~~~~~~~~~~~~~~~~~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~-~~~~~~----- 244 (454)
|.++.|.+|.+||.+.+.+..+|+..+.....+.+++|+|||+|.+|+|+|.+|++.+ +|+++.|++ .+.+..
T Consensus 129 G~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~~~~~~~~~~~~~ 207 (357)
T 4a9w_A 129 GTWGEAYTPEYQGLESFAGIQLHSAHYSTPAPFAGMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHEPAFLADDVDGRV 207 (357)
T ss_dssp CSGGGBCCCCCTTGGGCCSEEEEGGGCCCSGGGTTSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSCCCBCCTTCCTHH
T ss_pred CCCCCCCCCCCCCccccCCcEEEeccCCChhhcCCCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCCCeecchhhcCcc
Confidence 9878899999999999999999999998888888999999999999999999999998 699999874 432211
Q ss_pred -----hhhhc----------------------------cCCCeEEcCceeEEecCCcEEEeCCCEEeeceEEEccCcccC
Q 044575 245 -----SKVIS----------------------------KHNNLHLHPQIDCLREDGRVTFVDGCWVTADTILYCTGYSYS 291 (454)
Q Consensus 245 -----~~~l~----------------------------~~~~i~~~~~v~~v~~~~~v~~~dG~~i~~D~vI~atG~~~~ 291 (454)
.+.+. +.+.+.....++++..+ .|.+.||+++++|.||+|||++|+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~v~~~~~~-~v~~~~g~~i~~D~vi~a~G~~p~ 286 (357)
T 4a9w_A 208 LFERATERWKAQQEGREPDLPPGGFGDIVMVPPVLDARARGVLAAVPPPARFSPT-GMQWADGTERAFDAVIWCTGFRPA 286 (357)
T ss_dssp HHTC----------------------CBCCCHHHHHHHHTTCCCEECCCSEEETT-EEECTTSCEEECSEEEECCCBCCC
T ss_pred HHHHHHHHHhccccccCCCcccccccCcccChhHHHHHhcCceEEecCcceEeCC-eeEECCCCEecCCEEEECCCcCCC
Confidence 11111 12235566777888765 499999999999999999999999
Q ss_pred CcCCCCC------CceeeCCCCcccccCcccCCCCCCCceEec--cccc--ccchhHHHHHHHHHHHHHcCCC
Q 044575 292 FPFLDTK------GIVVVDDDRVGPLYEHTFPPSLAPSLSFVG--IPRK--LIGFPFFESQAKWIAQLLSGKR 354 (454)
Q Consensus 292 ~~~l~~~------g~i~v~~~~~~~~~~~~~~~~~~p~l~~iG--~~~~--~~~~~~a~~qa~~~a~~i~g~~ 354 (454)
++++... |.+.+|+.. ... ++.|++|++| ++.. ......|..||+.+|+++...+
T Consensus 287 ~~~l~~~gl~~~~G~i~vd~~~-------l~~-t~~~~vya~Gd~d~~~~~~~~~~~A~~~g~~~a~~i~~~l 351 (357)
T 4a9w_A 287 LSHLKGLDLVTPQGQVEVDGSG-------LRA-LAVPSVWLLGYGDWNGMASATLIGVTRYAREAVRQVTAYC 351 (357)
T ss_dssp CGGGTTTTCBCTTSCBCBCTTS-------CBB-SSCTTEEECSSCGGGSTTCSSTTTHHHHHHHHHHHHHHHT
T ss_pred CcccCcccccCCCCCccccCCc-------ccC-CCCCCeEEeccccccccchhhhhhhHHHHHHHHHHHHHHH
Confidence 9988653 334444430 122 4579999999 4443 2345678999999998876544
No 4
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=100.00 E-value=2.3e-39 Score=330.86 Aligned_cols=314 Identities=21% Similarity=0.318 Sum_probs=240.4
Q ss_pred CCcEEEECcChHHHHHHHHHH-HcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELR-KEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKK 90 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~-~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (454)
.+||+|||||+||+++|..|+ +.|.+|+|||+++.+||+|... .|+......+...+.++..+.....
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~-----------~ypg~~~d~~s~~~~~~~~~~~~~~ 76 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWN-----------RYPGALSDTESHLYRFSFDRDLLQE 76 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHC-----------CCTTCEEEEEGGGSSCCSCHHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCccccc-----------CCCCceecCCcceeeeccccccccC
Confidence 479999999999999999999 8899999999999999999854 3455555555555554411000000
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEcc
Q 044575 91 GRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVAT 170 (454)
Q Consensus 91 ~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAt 170 (454)
......|+++.++.+|+.++++++++...++++++|++++..++.. .|+|++.++. ++.||+||+||
T Consensus 77 ~~~~~~~~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~--------~~~V~~~~G~-----~i~ad~lV~At 143 (540)
T 3gwf_A 77 STWKTTYITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDEN--------LWEVTTDHGE-----VYRAKYVVNAV 143 (540)
T ss_dssp CCCSBSEEEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTT--------EEEEEETTSC-----EEEEEEEEECC
T ss_pred CCCcccCCCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCC--------EEEEEEcCCC-----EEEeCEEEECC
Confidence 0133467889999999999999999977799999999999876532 8999987764 78999999999
Q ss_pred CCCCCCCCCCCCCcCCccceeEEeecCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCc-Cc----cch
Q 044575 171 GHYSYPRLPSIKGMDKWKRKQMHSHIYRVPEPFRNEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNI-SE----GLS 245 (454)
Q Consensus 171 G~~~~p~~p~i~G~~~~~~~~~~~~~~~~~~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~-~~----~~~ 245 (454)
|.++.|+.|++||++.|.+..+|+..+.....+.+|+|+|||+|.||+|+|.+|++.+++|+++.|++.+ .+ .+.
T Consensus 144 G~~s~p~~p~ipG~~~f~g~~~~~~~~~~~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~i~p~~~~~~~ 223 (540)
T 3gwf_A 144 GLLSAINFPNLPGLDTFEGETIHTAAWPEGKSLAGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQYSVPVGNRPVN 223 (540)
T ss_dssp CSCCSBCCCCCTTGGGCCSEEEEGGGCCSSCCCTTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCCCEEECCCCBCC
T ss_pred cccccCCCCCCCCccccCCCEEEeecCCCccccccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCccCCCC
Confidence 9888999999999999999999999988877889999999999999999999999999999999999884 10 000
Q ss_pred ----hhhc------------------------------------------------------------------------
Q 044575 246 ----KVIS------------------------------------------------------------------------ 249 (454)
Q Consensus 246 ----~~l~------------------------------------------------------------------------ 249 (454)
+.+.
T Consensus 224 ~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (540)
T 3gwf_A 224 PEQIAEIKADYDRIWERAKNSAVAFGFEESTLPAMSVSEEERNRIFQEAWDHGGGFRFMFGTFGDIATDEAANEAAASFI 303 (540)
T ss_dssp HHHHHHHHHTHHHHHHHHHTSSSCSSSCCCCCCGGGSCHHHHHHHHHHHHHHCCHHHHHHTSCSCTTTCHHHHHHHHHHH
T ss_pred HHHHHHHHhccHHHHHHHHhccccccccccchhhhhCCHHHHHHHHHHHHhcccchhhhhhhhhhhhcCHHHHHHHHHHH
Confidence 0000
Q ss_pred -------------------------------------cCCCeEE----cCceeEEecCCcEEEeCCCEEeeceEEEccCc
Q 044575 250 -------------------------------------KHNNLHL----HPQIDCLREDGRVTFVDGCWVTADTILYCTGY 288 (454)
Q Consensus 250 -------------------------------------~~~~i~~----~~~v~~v~~~~~v~~~dG~~i~~D~vI~atG~ 288 (454)
+..++.+ ...|+++++++ |++.||+++++|+||+||||
T Consensus 304 ~~~~~~~v~dp~~~~~l~P~~~g~kR~~~~~~y~~~l~~~nV~lv~~~~~~I~~it~~g-v~~~dG~~~~~DvIV~ATGf 382 (540)
T 3gwf_A 304 RAKVAEIIEDPETARKLMPKGLFAKRPLCDSGYYEVYNRPNVEAVAIKENPIREVTAKG-VVTEDGVLHELDVLVFATGF 382 (540)
T ss_dssp HHHHHHHCCSHHHHHHHCCCSCCCSSCEEESSTGGGGGSTTEEEEETTTSCEEEECSSE-EEETTCCEEECSEEEECCCB
T ss_pred HHHHHHHcCCHHHHHhCCCCCCCccccCCCccHHHHhcCCCEEEEeCCCCCccEEecCe-EEcCCCCEEECCEEEECCcc
Confidence 0112322 47889998775 99999999999999999999
Q ss_pred ccCCcCCCC-----CCceeeCC--CCcccccCcccCCCCCCCceEeccccc--ccchhHHHHHHHHHHHHHc
Q 044575 289 SYSFPFLDT-----KGIVVVDD--DRVGPLYEHTFPPSLAPSLSFVGIPRK--LIGFPFFESQAKWIAQLLS 351 (454)
Q Consensus 289 ~~~~~~l~~-----~g~i~v~~--~~~~~~~~~~~~~~~~p~l~~iG~~~~--~~~~~~a~~qa~~~a~~i~ 351 (454)
.++..++.. .+.+.+++ ......|..+..+ +.||+|++.-|.+ ......+|.|++|+++.|.
T Consensus 383 ~~~~~~~~~~~i~g~~G~~l~~~w~~~~~~y~g~~v~-gfPN~f~~~Gp~~~~~s~~~~~e~q~~~i~~~i~ 453 (540)
T 3gwf_A 383 DAVDGNYRRIEIRGRDGLHINDHWDGQPTSYLGVSTA-NFPNWFMVLGPNGPFTNLPPSIETQVEWISDTIG 453 (540)
T ss_dssp SCSSHHHHTSEEECGGGCBHHHHTSSSCCCBTTTBCT-TCTTEEESSCSSCBCSCHHHHHHHHHHHHHHHHH
T ss_pred CccccCcCcceEECCCCcCHHHhhccChhhccccccC-CCCceEEEecCCCCCccHHHHHHHHHHHHHHHHH
Confidence 998644432 12223332 1122467777765 4799999954442 2334799999999998874
No 5
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=100.00 E-value=1.7e-38 Score=324.85 Aligned_cols=314 Identities=26% Similarity=0.375 Sum_probs=235.5
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKK 90 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (454)
..+||+|||||+||+++|..|++.|.+|+|||+++.+||+|... .|+......+...+.++..|.....
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~-----------~yPg~~~d~~~~~y~~~f~~~~~~~ 76 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWN-----------RYPGCRLDTESYAYGYFALKGIIPE 76 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHC-----------CCTTCBCSSCHHHHCHHHHTTSSTT
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccC-----------CCCceeecCchhhcccccCcccccC
Confidence 45799999999999999999999999999999999999999753 3444444444444444321111000
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEcc
Q 044575 91 GRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVAT 170 (454)
Q Consensus 91 ~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAt 170 (454)
......|+++.++.+|+++.++++++..+++++++|++++..++.. .|+|++.++. ++.||+||+||
T Consensus 77 ~~~~~~~~~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~--------~w~V~~~~G~-----~~~ad~lV~At 143 (545)
T 3uox_A 77 WEWSENFASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDR--------LWEVTLDNEE-----VVTCRFLISAT 143 (545)
T ss_dssp CCCSBSSCBHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGT--------EEEEEETTTE-----EEEEEEEEECC
T ss_pred CCccccCCCHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCC--------EEEEEECCCC-----EEEeCEEEECc
Confidence 1144567899999999999999999987899999999999876432 8999987654 78999999999
Q ss_pred CCCCCCCCCCCCCcCCccceeEEeecCCCC-------CCCCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCc-Cc
Q 044575 171 GHYSYPRLPSIKGMDKWKRKQMHSHIYRVP-------EPFRNEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNI-SE 242 (454)
Q Consensus 171 G~~~~p~~p~i~G~~~~~~~~~~~~~~~~~-------~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~-~~ 242 (454)
|.++.|+.|++||++.|.+..+|+..+... .++.+|+|+|||+|.||+|+|.+|++.+++||++.|++.+ .+
T Consensus 144 G~~s~p~~p~ipG~~~f~g~~~h~~~~~~~~~~~~~~~~~~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~~i~p 223 (545)
T 3uox_A 144 GPLSASRMPDIKGIDSFKGESFHSSRWPTDAEGAPKGVDFTGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPNWCTP 223 (545)
T ss_dssp CSCBC---CCCTTGGGCCSEEEEGGGCCBCTTSCBSCCCCBTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCCCCEE
T ss_pred CCCCCCcCCCCCCccccCCCeEEcccccccccccccccccCCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCCcccc
Confidence 988899999999999999999999887665 6678999999999999999999999999999999999874 00
Q ss_pred c------------ch-----------------------------------------------------------------
Q 044575 243 G------------LS----------------------------------------------------------------- 245 (454)
Q Consensus 243 ~------------~~----------------------------------------------------------------- 245 (454)
. +.
T Consensus 224 ~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~e~r~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (545)
T 3uox_A 224 LGNSPMSKEKMDSLRNRYPTILEYVKSTDTAFPYHRDPRKGTDVSESERDAFFEELYRQPGYGIWLSGFRDLLLNKESNK 303 (545)
T ss_dssp CCCCBCCHHHHHHHHHTHHHHHHHHTTSSSSSSCCCBSSCGGGSCHHHHHHHHHHHHHSSSTHHHHTSBTTTTTCHHHHH
T ss_pred CCcCCCCHHHHHHHHhhhHHHHHHHhhcccccccccccchhhhCCHHHHHHHHHHHHhhhhHHHHHhhhhhhhcCHHHHH
Confidence 0 00
Q ss_pred --------------------hhh-c-cC-------------------CCeEE----cCceeEEecCCcEEEeCCCEEeec
Q 044575 246 --------------------KVI-S-KH-------------------NNLHL----HPQIDCLREDGRVTFVDGCWVTAD 280 (454)
Q Consensus 246 --------------------~~l-~-~~-------------------~~i~~----~~~v~~v~~~~~v~~~dG~~i~~D 280 (454)
+.+ . .+ .++.+ ...|+++++++ |++.|| ++++|
T Consensus 304 ~~~~~~~~~~~~~v~d~~~~~~l~P~~~~~g~kR~~~~~~y~~al~~~nV~lv~~~~~~I~~it~~g-v~~~dG-~~~~D 381 (545)
T 3uox_A 304 FLADFVAKKIRQRVKDPVVAEKLIPKDHPFGAKRVPMETNYYETYNRDNVHLVDIREAPIQEVTPEG-IKTADA-AYDLD 381 (545)
T ss_dssp HHHHHHHHHHHHHCSCHHHHHHTSCSSSCTTSSCCCEESSHHHHTTSTTEEEEETTTSCEEEEETTE-EEESSC-EEECS
T ss_pred HHHHHHHHHHHHHcCCHHHHHhCCCCCCCCCCCccCCCccHHHHhcCCCEEEEecCCCCceEEccCe-EEeCCC-eeecC
Confidence 000 0 01 12322 57888998775 999999 99999
Q ss_pred eEEEccCcccCCcCCCC-----CCceeeCC--CCcccccCcccCCCCCCCceEecccccc----cchhHHHHHHHHHHHH
Q 044575 281 TILYCTGYSYSFPFLDT-----KGIVVVDD--DRVGPLYEHTFPPSLAPSLSFVGIPRKL----IGFPFFESQAKWIAQL 349 (454)
Q Consensus 281 ~vI~atG~~~~~~~l~~-----~g~i~v~~--~~~~~~~~~~~~~~~~p~l~~iG~~~~~----~~~~~a~~qa~~~a~~ 349 (454)
+||+||||.+++.++.. .+...+++ ......|..+..+ +.||+|++.-|.++ .....+|.|++|++++
T Consensus 382 ~IV~ATGf~~~~~~~~~~~i~g~~G~~l~~~w~~~~~~y~g~~~~-gfPN~f~~~gp~~~~~~~s~~~~~e~~~~~i~~~ 460 (545)
T 3uox_A 382 VIIYATGFDAVTGSLDRIDIRGKDNVRLIDAWAEGPSTYLGLQAR-GFPNFFTLVGPHNGSTFCNVGVCGGLQAEWVLRM 460 (545)
T ss_dssp EEEECCCCBSSSCSCTTSEEECGGGCBHHHHTTTSCCCBTTTBCT-TCTTEEECSSGGGTGGGSCHHHHHHHHHHHHHHH
T ss_pred EEEECCccccccccCCCceEECCCCccHHHhhccccceeeccccC-CCCcEEEEeCCCCCCccccHHHHHHHHHHHHHHH
Confidence 99999999987665542 11222221 1112356666665 47999999777643 2246899999999988
Q ss_pred Hc
Q 044575 350 LS 351 (454)
Q Consensus 350 i~ 351 (454)
|.
T Consensus 461 i~ 462 (545)
T 3uox_A 461 IS 462 (545)
T ss_dssp HH
T ss_pred HH
Confidence 74
No 6
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=100.00 E-value=1.5e-38 Score=325.55 Aligned_cols=314 Identities=25% Similarity=0.353 Sum_probs=239.9
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKK 90 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (454)
..+||+|||||+||+++|..|++.|++|+|||+++.+||+|... .|+.....+|...+.++-.+.....
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~-----------~ypg~~~dv~s~~y~~~f~~~~~~~ 88 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWN-----------RYPGARCDVESIDYSYSFSPELEQE 88 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHC-----------CCTTCBCSSCTTTSSCCSCHHHHHH
T ss_pred CCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccC-----------CCCCceeCCCchhcccccccccccC
Confidence 35799999999999999999999999999999999999999854 2444445555555544321100000
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEcc
Q 044575 91 GRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVAT 170 (454)
Q Consensus 91 ~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAt 170 (454)
......|+++.++.+|+.++++++++..+++++++|++++..++.. .|+|++.++. ++.||+||+||
T Consensus 89 ~~~~~~~~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~--------~w~V~~~~G~-----~i~ad~lV~At 155 (549)
T 4ap3_A 89 WNWSEKYATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGL--------RWTVRTDRGD-----EVSARFLVVAA 155 (549)
T ss_dssp CCCSSSSCBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTT--------EEEEEETTCC-----EEEEEEEEECC
T ss_pred CCCccCCCCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCC--------EEEEEECCCC-----EEEeCEEEECc
Confidence 0144568899999999999999999977799999999999876543 8999987664 68999999999
Q ss_pred CCCCCCCCCCCCCcCCccceeEEeecCC-CCCCCCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCc-Ccc-----
Q 044575 171 GHYSYPRLPSIKGMDKWKRKQMHSHIYR-VPEPFRNEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNI-SEG----- 243 (454)
Q Consensus 171 G~~~~p~~p~i~G~~~~~~~~~~~~~~~-~~~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~-~~~----- 243 (454)
|.++.|+.|++||++.|.+..+|+..+. ...++.+|+|+|||+|.||+|+|.+|++.+++|+++.|++.+ .+.
T Consensus 156 G~~s~p~~p~ipG~~~f~g~~~~~~~~~~~~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~ilp~~~~~~ 235 (549)
T 4ap3_A 156 GPLSNANTPAFDGLDRFTGDIVHTARWPHDGVDFTGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSANYSIPAGNVPL 235 (549)
T ss_dssp CSEEECCCCCCTTGGGCCSEEEEGGGCCTTCCCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCCEEECC----
T ss_pred CCCCCCCCCCCCCcccCCCceEEeccccccccccCCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCcCCCC
Confidence 9888999999999999999999999887 567789999999999999999999999999999999999874 000
Q ss_pred -------ch-----------------------------------------------------------------------
Q 044575 244 -------LS----------------------------------------------------------------------- 245 (454)
Q Consensus 244 -------~~----------------------------------------------------------------------- 245 (454)
+.
T Consensus 236 ~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~e~r~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (549)
T 4ap3_A 236 DDATRAEQKANYAERRRLSRESGGGSPHRPHPKSALEVSEEERRAVYEERWKLGGVLFSKAFPDQLTDPAANDTARAFWE 315 (549)
T ss_dssp CHHHHHHHHHTHHHHHHHHHHSSSSSSCCCCSSCTTSSCHHHHHHHHHHHHHHCHHHHTTSSTTTTTCHHHHHHHHHHHH
T ss_pred CHHHHHHHHhccHHHHHHHHhhccccccccCccchhcCCHHHHHHHHHHHHhhcchHHHhhhhhhhcCHHHHHHHHHHHH
Confidence 00
Q ss_pred -------------hhh-cc-C-------------------CCeEE----cCceeEEecCCcEEEeCCCEEeeceEEEccC
Q 044575 246 -------------KVI-SK-H-------------------NNLHL----HPQIDCLREDGRVTFVDGCWVTADTILYCTG 287 (454)
Q Consensus 246 -------------~~l-~~-~-------------------~~i~~----~~~v~~v~~~~~v~~~dG~~i~~D~vI~atG 287 (454)
+.+ .. + .++.+ ...|+++++++ |++.|| ++++|+||+|||
T Consensus 316 ~~~~~~v~d~~~~~~l~P~~~~~~~kR~~~~~~y~~al~~~~V~lvd~~~~~I~~it~~g-v~~~dG-~~~~D~iI~ATG 393 (549)
T 4ap3_A 316 EKIRAVVDDPAVAELLTPKDHAIGAKRIVLDSGYYETYNRDNVELVDLRSTPIVGMDETG-IVTTGA-HYDLDMIVLATG 393 (549)
T ss_dssp HHHHHHCSCHHHHHHHSCSSCCBTTBCCEEESSTGGGGGSTTEEEEETTTSCEEEEETTE-EEESSC-EEECSEEEECCC
T ss_pred HHHHHHcCCHHHHHhCCCCCCCCCccccCCCccHHHHhcCCCEEEEeCCCCCceEEeCCc-EEeCCC-ceecCEEEECCc
Confidence 000 00 0 12322 47788898775 999999 999999999999
Q ss_pred cccCCcCCCC-----CCceeeCCC--CcccccCcccCCCCCCCceEecccccc----cchhHHHHHHHHHHHHHc
Q 044575 288 YSYSFPFLDT-----KGIVVVDDD--RVGPLYEHTFPPSLAPSLSFVGIPRKL----IGFPFFESQAKWIAQLLS 351 (454)
Q Consensus 288 ~~~~~~~l~~-----~g~i~v~~~--~~~~~~~~~~~~~~~p~l~~iG~~~~~----~~~~~a~~qa~~~a~~i~ 351 (454)
+.++..++.. .+.+.+++. .....|..+..+ +.||+|++.-|.++ .....+|.|++|+++.|.
T Consensus 394 f~~~~~~~~~~~i~g~~G~~l~~~w~~~~~~y~g~~~~-gfPN~f~~~Gp~~~~~~~s~~~~~e~~~~~i~~~i~ 467 (549)
T 4ap3_A 394 FDAMTGSLDKLEIVGRGGRTLKETWAAGPRTYLGLGID-GFPNFFNLTGPGSPSVLANMVLHSELHVDWVADAIA 467 (549)
T ss_dssp EEESSTTGGGSEEECGGGCBHHHHTTTSCCCBTTTBCT-TCTTEEETTCTTSCGGGSCHHHHHHHHHHHHHHHHH
T ss_pred ccccccccCceeEECCCCcCHHHhhccchhhccccccC-CCCcEEEEeCCCCCCcCccHHHHHHHHHHHHHHHHH
Confidence 9998645432 122333321 112467777765 47999999766632 234699999999998874
No 7
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=7.6e-37 Score=299.49 Aligned_cols=311 Identities=19% Similarity=0.290 Sum_probs=219.4
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCC-cEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGH-RVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKK 90 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~-~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (454)
.+||+|||||++|+++|..|++.|. +|+|||+++ +||.|.+.+.... ..++.+ ....+.+.++......
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~~~~~~~~~--~~~~~~-------~~~~~g~~~~~~~~~~ 73 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSFKHWPKSTR--TITPSF-------TSNGFGMPDMNAISMD 73 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHHHTSCTTCB--CSSCCC-------CCGGGTCCCTTCSSTT
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCccccCccccc--ccCcch-------hcccCCchhhhhcccc
Confidence 4799999999999999999999999 999999988 9999986532110 000000 0111111111111000
Q ss_pred C----CCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEE
Q 044575 91 G----RDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAV 166 (454)
Q Consensus 91 ~----~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~v 166 (454)
. .....++.+.++..|+.++++++++. ++++++|.+|+..++ .|.|.+.++ ++.||+|
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~--i~~~~~v~~i~~~~~----------~~~v~~~~g------~~~~d~v 135 (369)
T 3d1c_A 74 TSPAFTFNEEHISGETYAEYLQVVANHYELN--IFENTVVTNISADDA----------YYTIATTTE------TYHADYI 135 (369)
T ss_dssp CCHHHHHCCSSCBHHHHHHHHHHHHHHTTCE--EECSCCEEEEEECSS----------SEEEEESSC------CEEEEEE
T ss_pred ccccccccccCCCHHHHHHHHHHHHHHcCCe--EEeCCEEEEEEECCC----------eEEEEeCCC------EEEeCEE
Confidence 0 01234678889999999999999987 889999999987643 688876543 5789999
Q ss_pred EEccCCCCCCCCCCCCCcCCccceeEEeecCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCcCc----
Q 044575 167 VVATGHYSYPRLPSIKGMDKWKRKQMHSHIYRVPEPFRNEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNISE---- 242 (454)
Q Consensus 167 ViAtG~~~~p~~p~i~G~~~~~~~~~~~~~~~~~~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~~~---- 242 (454)
|+|||++..| .+|+ +..+|+..+.....+++++|+|||+|.+|+|+|..|++.+.+|++++|++.+.+
T Consensus 136 VlAtG~~~~p---~ip~-----~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~~~d 207 (369)
T 3d1c_A 136 FVATGDYNFP---KKPF-----KYGIHYSEIEDFDNFNKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPDAD 207 (369)
T ss_dssp EECCCSTTSB---CCCS-----SSCEEGGGCSCGGGSCSSEEEEECCSHHHHHHHHHHHHTTCEEEEECC----------
T ss_pred EECCCCCCcc---CCCC-----CceechhhcCChhhcCCCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCCCCC
Confidence 9999955444 4445 346788777777677889999999999999999999999999999999877542
Q ss_pred -----------cchhhhccC--CCeEEcCceeEEe--cCC-cEEEeCCCEEe-eceEEEccCcccCCcCCC------CCC
Q 044575 243 -----------GLSKVISKH--NNLHLHPQIDCLR--EDG-RVTFVDGCWVT-ADTILYCTGYSYSFPFLD------TKG 299 (454)
Q Consensus 243 -----------~~~~~l~~~--~~i~~~~~v~~v~--~~~-~v~~~dG~~i~-~D~vI~atG~~~~~~~l~------~~g 299 (454)
.+.+.+.+. .+++.+..|.++. .++ .|.+.||+++. +|.||+|||++|+++++. ++|
T Consensus 208 ~~~~~~~~~~~~l~~~l~~~g~v~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~d~vi~a~G~~~~~~~~~~~~~~~~~g 287 (369)
T 3d1c_A 208 PSVRLSPYTRQRLGNVIKQGARIEMNVHYTVKDIDFNNGQYHISFDSGQSVHTPHEPILATGFDATKNPIVQQLFVTTNQ 287 (369)
T ss_dssp CTTSCCHHHHHHHHHHHHTTCCEEEECSCCEEEEEEETTEEEEEESSSCCEEESSCCEECCCBCGGGSHHHHHHSCCTTS
T ss_pred CCccCCHHHHHHHHHHHhhCCcEEEecCcEEEEEEecCCceEEEecCCeEeccCCceEEeeccCCccchhhhhhccCCCC
Confidence 112223332 5677788899984 332 47788998776 699999999999985543 334
Q ss_pred ceeeCCCCcccccCcccCCCCCCCceEecccccccc-----hhHHHHHHHHHHHHHcCCCCCCCHHHHHHHHH
Q 044575 300 IVVVDDDRVGPLYEHTFPPSLAPSLSFVGIPRKLIG-----FPFFESQAKWIAQLLSGKRTLPSWDQMMQSVK 367 (454)
Q Consensus 300 ~i~v~~~~~~~~~~~~~~~~~~p~l~~iG~~~~~~~-----~~~a~~qa~~~a~~i~g~~~lp~~~~~~~~~~ 367 (454)
.+.+|+... . +..|++|++|++..... ...++.||+++|++|.|+..+|+.++|++...
T Consensus 288 ~i~v~~~~~--------~-t~~~~v~a~GD~~~~~~~~~~~~~~~~~~a~~~a~~l~~~~~~p~~~~~~~~~~ 351 (369)
T 3d1c_A 288 DIKLTTHDE--------S-TRYPNIFMIGATVENDNAKLCYIYKFRARFAVLAHLLTQREGLPAKQEVIENYQ 351 (369)
T ss_dssp CCCBCTTSB--------B-SSSTTEEECSTTCCCSSCCCCSHHHHGGGHHHHHHHHHHHTTCCCCHHHHHHHH
T ss_pred CEEechhhc--------c-cCCCCeEEeccccccCCeeEEEEehhhHHHHHHHHHHhcccCCCCcchHHHHHH
Confidence 455554322 2 35699999999875321 24678899999999999999999876665443
No 8
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=100.00 E-value=1e-36 Score=312.98 Aligned_cols=314 Identities=24% Similarity=0.371 Sum_probs=230.8
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKK 90 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (454)
..+||+|||||++|+++|..|++.|++|+|||+++.+||+|... .|+......+...+.++..+.....
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~-----------~~pg~~~d~~~~~~~~~f~~~~~~~ 83 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWN-----------RYPGARCDIESIEYCYSFSEEVLQE 83 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHC-----------CCTTCBCSSCTTTSSCCSCHHHHHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccc-----------CCCceeecccccccccccChhhhhc
Confidence 35799999999999999999999999999999999999999743 1233333333333333211100000
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEcc
Q 044575 91 GRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVAT 170 (454)
Q Consensus 91 ~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAt 170 (454)
......|+++.++.+|++.+++++++...++++++|++++..++.. .|+|++.++. ++.||+||+||
T Consensus 84 ~~~~~~~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~--------~w~V~~~~G~-----~~~ad~vV~At 150 (542)
T 1w4x_A 84 WNWTERYASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATN--------TWTVDTNHGD-----RIRARYLIMAS 150 (542)
T ss_dssp CCCCBSSCBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTT--------EEEEEETTCC-----EEEEEEEEECC
T ss_pred cCcccccCCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCC--------eEEEEECCCC-----EEEeCEEEECc
Confidence 0023467889999999999999999877899999999999875432 7999887654 68999999999
Q ss_pred CCCCCCCCCCCCCcCCccceeEEeecCC-CCCCCCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCcC-cc----c
Q 044575 171 GHYSYPRLPSIKGMDKWKRKQMHSHIYR-VPEPFRNEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNIS-EG----L 244 (454)
Q Consensus 171 G~~~~p~~p~i~G~~~~~~~~~~~~~~~-~~~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~~-~~----~ 244 (454)
|.++.|++|++||++.|.+..+|+..+. +..++.+|+|+|||+|.||+|+|..+++.+.+|+++.|++.+. +. +
T Consensus 151 G~~s~p~~p~i~G~~~f~G~~~hs~~~~~~~~~~~gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~~~~p~~~~~~ 230 (542)
T 1w4x_A 151 GQLSVPQLPNFPGLKDFAGNLYHTGNWPHEPVDFSGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHFAVPARNAPL 230 (542)
T ss_dssp CSCCCCCCCCCTTGGGCCSEEEEGGGCCSSCCCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCCEEECCCCBC
T ss_pred CCCCCCCCCCCCCcccCCCceEECCCCCCchhccCCCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCcccccCCCCCC
Confidence 9988999999999999999999998886 4466789999999999999999999999999999999987651 10 0
Q ss_pred h-------------------------------------------------------------------------------
Q 044575 245 S------------------------------------------------------------------------------- 245 (454)
Q Consensus 245 ~------------------------------------------------------------------------------- 245 (454)
.
T Consensus 231 ~~~~~~~~~~~~p~l~~~~~~~~~G~~~~~d~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (542)
T 1w4x_A 231 DPEFLADLKKRYAEFREESRNTPGGTHRYQGPKSALEVSDEELVETLERYWQEGGPDILAAYRDILRDRDANERVAEFIR 310 (542)
T ss_dssp CHHHHHHHHTTHHHHHHHHHTSSSSSCCCCCCSCTTTSCHHHHHHHHHHHHHHCSGGGGGSSTTTTTCHHHHHHHHHHHH
T ss_pred CHHHHHHHHhhCHHHHHHHHhhccccccCccccchhcCCHHHHHHHHHHHHhhcchHHHHHHHHHhcChHHHHHHHHHHH
Confidence 0
Q ss_pred -------------hhhc--cC-------------------CCeEE----cCceeEEecCCcEEEeCCCEEeeceEEEccC
Q 044575 246 -------------KVIS--KH-------------------NNLHL----HPQIDCLREDGRVTFVDGCWVTADTILYCTG 287 (454)
Q Consensus 246 -------------~~l~--~~-------------------~~i~~----~~~v~~v~~~~~v~~~dG~~i~~D~vI~atG 287 (454)
+.+. .+ .++.+ ...|+++++++ |++.| +++++|+||+|||
T Consensus 311 ~~~~~~~~~~~~~~~l~P~~~~~~~kr~~~~~~y~~~~~~~~v~lv~~~~~~i~~i~~~g-v~~~d-~~~~~D~ii~atG 388 (542)
T 1w4x_A 311 NKIRNTVRDPEVAERLVPKGYPFGTKRLILEIDYYEMFNRDNVHLVDTLSAPIETITPRG-VRTSE-REYELDSLVLATG 388 (542)
T ss_dssp HHHHHHCSSHHHHHHHSCCSSCSSSSCCEEESSHHHHTTSTTEEEEETTTSCEEEECSSE-EEESS-CEEECSEEEECCC
T ss_pred HHHHHHcCCHHHHHhcCCCCCCccccCCCCCccHHHHhCCCCEEEEecCCCCceEEcCCe-EEeCC-eEEecCEEEEcCC
Confidence 0000 00 12322 56788887664 99999 9999999999999
Q ss_pred cccCCcCCCC------CCceeeCCCC-cccccCcccCCCCCCCceEe-ccccc--ccch-hHHHHHHHHHHHHHc
Q 044575 288 YSYSFPFLDT------KGIVVVDDDR-VGPLYEHTFPPSLAPSLSFV-GIPRK--LIGF-PFFESQAKWIAQLLS 351 (454)
Q Consensus 288 ~~~~~~~l~~------~g~i~v~~~~-~~~~~~~~~~~~~~p~l~~i-G~~~~--~~~~-~~a~~qa~~~a~~i~ 351 (454)
+.++.+++.. +|....+... ....|..+..+ +.||+|++ |.... ...+ +.++.|+++++++|.
T Consensus 389 ~~~~~~~~~~~~i~g~~G~~l~~~w~~~~~~y~~~~v~-~~Pn~f~~~G~~~~~~~~~~~~~~e~q~~~ia~~i~ 462 (542)
T 1w4x_A 389 FDALTGALFKIDIRGVGNVALKEKWAAGPRTYLGLSTA-GFPNLFFIAGPGSPSALSNMLVSIEQHVEWVTDHIA 462 (542)
T ss_dssp CCCTTHHHHTSEEECGGGCBHHHHTTTSCCCBTTTBCT-TSTTEEESSCTTSSGGGSCHHHHHHHHHHHHHHHHH
T ss_pred ccccccCcCceeeECCCCCCHHHhhcCchheecccccC-CCCceEEEcCCCCCcccccHHHHHHHHHHHHHHHHH
Confidence 9997665432 2222211111 11245555554 47999998 76642 2333 799999999998875
No 9
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=100.00 E-value=2.5e-36 Score=291.22 Aligned_cols=283 Identities=18% Similarity=0.200 Sum_probs=219.8
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKKG 91 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (454)
.+||+|||||+||+++|..|++.|++|+|||+++.+||.|.+. |+.... ..+.+++
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~~------------~~~~~~------~~~~~~~------ 62 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSAL------------YPEKYI------YDVAGFP------ 62 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHH------------CTTSEE------CCSTTCS------
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehhc------------CCCceE------eccCCCC------
Confidence 4799999999999999999999999999999999999999631 111110 1111111
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccC
Q 044575 92 RDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATG 171 (454)
Q Consensus 92 ~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG 171 (454)
..+..++..|+.++++++++. ++++++|.+++...++ .|.|++.++ ++.||+||+|||
T Consensus 63 -----~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~i~~~~~~---------~~~v~~~~g------~~~~d~vVlAtG 120 (332)
T 3lzw_A 63 -----KIRAQELINNLKEQMAKFDQT--ICLEQAVESVEKQADG---------VFKLVTNEE------THYSKTVIITAG 120 (332)
T ss_dssp -----SEEHHHHHHHHHHHHTTSCCE--EECSCCEEEEEECTTS---------CEEEEESSE------EEEEEEEEECCT
T ss_pred -----CCCHHHHHHHHHHHHHHhCCc--EEccCEEEEEEECCCC---------cEEEEECCC------EEEeCEEEECCC
Confidence 124689999999999988876 8899999999987543 688888654 489999999999
Q ss_pred CCC-CCCCCCCCCcCCccceeEEeecCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCcCcc---chhh
Q 044575 172 HYS-YPRLPSIKGMDKWKRKQMHSHIYRVPEPFRNEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNISEG---LSKV 247 (454)
Q Consensus 172 ~~~-~p~~p~i~G~~~~~~~~~~~~~~~~~~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~~~~---~~~~ 247 (454)
..+ .|+.|.+||.+.+.+..+|+ .+.....+++++|+|||+|.+|+|+|..|++.+.+|+++.+.+.+.+. +.++
T Consensus 121 ~~~~~p~~~~~~g~~~~~g~~~~~-~~~~~~~~~~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~~~~~~~~~l 199 (332)
T 3lzw_A 121 NGAFKPRKLELENAEQYEGKNLHY-FVDDLQKFAGRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRAHEHSVENL 199 (332)
T ss_dssp TSCCEECCCCCTTGGGGBTTTEES-SCSCGGGGBTCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCSSCHHHHHHH
T ss_pred CCcCCCCCCCCCChhhccCceEEE-ecCCHHHcCCCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCCccHHHHHHH
Confidence 422 89999999998887777887 666666677899999999999999999999999999999998876322 2222
Q ss_pred hccCCCeEEcCceeEEecCC---cEEEeC-----CCEEeeceEEEccCcccCCcCCCC------CCceeeCCCCcccccC
Q 044575 248 ISKHNNLHLHPQIDCLREDG---RVTFVD-----GCWVTADTILYCTGYSYSFPFLDT------KGIVVVDDDRVGPLYE 313 (454)
Q Consensus 248 l~~~~~i~~~~~v~~v~~~~---~v~~~d-----G~~i~~D~vI~atG~~~~~~~l~~------~g~i~v~~~~~~~~~~ 313 (454)
....++++.+..+.++..++ .|++.+ ++++++|.||+|+|++|+.+++.. +|.+.+|++..
T Consensus 200 ~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~~~~~~~g~i~vd~~~~----- 274 (332)
T 3lzw_A 200 HASKVNVLTPFVPAELIGEDKIEQLVLEEVKGDRKEILEIDDLIVNYGFVSSLGPIKNWGLDIEKNSIVVKSTME----- 274 (332)
T ss_dssp HHSSCEEETTEEEEEEECSSSCCEEEEEETTSCCEEEEECSEEEECCCEECCCGGGGGSSCCEETTEEECCTTSB-----
T ss_pred hcCCeEEEeCceeeEEecCCceEEEEEEecCCCceEEEECCEEEEeeccCCCchHHhhcCccccCCeEEeCCCCc-----
Confidence 23345777788899997654 377776 356889999999999999888653 45666666443
Q ss_pred cccCCCCCCCceEeccccc----ccchhHHHHHHHHHHHHHc
Q 044575 314 HTFPPSLAPSLSFVGIPRK----LIGFPFFESQAKWIAQLLS 351 (454)
Q Consensus 314 ~~~~~~~~p~l~~iG~~~~----~~~~~~a~~qa~~~a~~i~ 351 (454)
+..|++|++|++.. ......|..||+.+|.++.
T Consensus 275 -----t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~ 311 (332)
T 3lzw_A 275 -----TNIEGFFAAGDICTYEGKVNLIASGFGEAPTAVNNAK 311 (332)
T ss_dssp -----CSSTTEEECGGGEECTTCCCCHHHHHHHHHHHHHHHH
T ss_pred -----eecCCEEEccceecCCCCcceEeeehhhHHHHHHHHH
Confidence 35699999999973 2345688889998887764
No 10
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=100.00 E-value=1.6e-35 Score=285.04 Aligned_cols=284 Identities=20% Similarity=0.210 Sum_probs=214.8
Q ss_pred ccCCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCC
Q 044575 9 CAQSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVL 88 (454)
Q Consensus 9 ~~~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (454)
|...+||+|||||++|+++|..|++.|++|+|||++ .+||.|.+.... ..++.+
T Consensus 5 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~~---------------------~~~~~~---- 58 (325)
T 2q7v_A 5 TAHDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQIAWSEEV---------------------ENFPGF---- 58 (325)
T ss_dssp CCEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGGCSCB---------------------CCSTTC----
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCccccccccc---------------------ccCCCC----
Confidence 334589999999999999999999999999999998 799998854221 001111
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEc--CCCccccCCcCCcEEEEEeecCCCeEEEEEeCEE
Q 044575 89 KKGRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGML--DCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAV 166 (454)
Q Consensus 89 ~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~v 166 (454)
+...++.++.+++.+.++++++. +++ .+|.+++.. ++. .|+|.+.++. ++.||+|
T Consensus 59 ------~~~~~~~~~~~~l~~~~~~~gv~--~~~-~~v~~i~~~~~~~~---------~~~v~~~~g~-----~~~~~~v 115 (325)
T 2q7v_A 59 ------PEPIAGMELAQRMHQQAEKFGAK--VEM-DEVQGVQHDATSHP---------YPFTVRGYNG-----EYRAKAV 115 (325)
T ss_dssp ------SSCBCHHHHHHHHHHHHHHTTCE--EEE-CCEEEEEECTTSSS---------CCEEEEESSC-----EEEEEEE
T ss_pred ------CCCCCHHHHHHHHHHHHHHcCCE--EEe-eeEEEEEeccCCCc---------eEEEEECCCC-----EEEeCEE
Confidence 11235688999999999999887 655 589998876 321 3888777654 7899999
Q ss_pred EEccCCCCCCCCCCCCCcCCccceeEEeecCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCcC--ccc
Q 044575 167 VVATGHYSYPRLPSIKGMDKWKRKQMHSHIYRVPEPFRNEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNIS--EGL 244 (454)
Q Consensus 167 ViAtG~~~~p~~p~i~G~~~~~~~~~~~~~~~~~~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~~--~~~ 244 (454)
|+||| +.|+.|.+||.+.+.+..+|...+.....+.+++|+|||+|.+|+|+|..|++.+.+|++++|.+.+. +.+
T Consensus 116 v~AtG--~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~ 193 (325)
T 2q7v_A 116 ILATG--ADPRKLGIPGEDNFWGKGVSTCATCDGFFYKGKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLRANKVA 193 (325)
T ss_dssp EECCC--EEECCCCCTTTTTTBTTTEESCHHHHGGGGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCSCHHH
T ss_pred EECcC--CCcCCCCCCChhhccCceEEEeccCCHHHcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCCcchHH
Confidence 99999 78899999998877666666554433344567999999999999999999999999999999988663 223
Q ss_pred hhhhcc--CCCeEEcCceeEEecCC---cEEEe---CCC--EEeeceEEEccCcccCCcCCCC------CCceeeCCCCc
Q 044575 245 SKVISK--HNNLHLHPQIDCLREDG---RVTFV---DGC--WVTADTILYCTGYSYSFPFLDT------KGIVVVDDDRV 308 (454)
Q Consensus 245 ~~~l~~--~~~i~~~~~v~~v~~~~---~v~~~---dG~--~i~~D~vI~atG~~~~~~~l~~------~g~i~v~~~~~ 308 (454)
.+.+.+ .++++.+..|+++..++ .|.+. +|+ ++++|.||+|||++|+.+++.. +|.+.+|++..
T Consensus 194 ~~~l~~~~gv~i~~~~~v~~i~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~~~~~g~i~vd~~~~ 273 (325)
T 2q7v_A 194 QARAFANPKMKFIWDTAVEEIQGADSVSGVKLRNLKTGEVSELATDGVFIFIGHVPNTAFVKDTVSLRDDGYVDVRDEIY 273 (325)
T ss_dssp HHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGTTTSCBCTTSCBCCBTTTB
T ss_pred HHHHHhcCCceEecCCceEEEccCCcEEEEEEEECCCCcEEEEEcCEEEEccCCCCChHHHhhhcccCCCccEecCCCCc
Confidence 233322 35677788899987654 46776 676 6889999999999999888753 23444444322
Q ss_pred ccccCcccCCCCCCCceEecccccc--cchhHHHHHHHHHHHHHcCC
Q 044575 309 GPLYEHTFPPSLAPSLSFVGIPRKL--IGFPFFESQAKWIAQLLSGK 353 (454)
Q Consensus 309 ~~~~~~~~~~~~~p~l~~iG~~~~~--~~~~~a~~qa~~~a~~i~g~ 353 (454)
++.|++|++||+... .....|..||+.+|.++...
T Consensus 274 ----------t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~ 310 (325)
T 2q7v_A 274 ----------TNIPMLFAAGDVSDYIYRQLATSVGAGTRAAMMTERQ 310 (325)
T ss_dssp ----------CSSTTEEECSTTTCSSCCCHHHHHHHHHHHHHHHHHH
T ss_pred ----------cCCCCEEEeecccCccHHHHHHHHHHHHHHHHHHHHH
Confidence 356999999999864 35678999999999887543
No 11
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=100.00 E-value=1.4e-35 Score=284.87 Aligned_cols=276 Identities=18% Similarity=0.184 Sum_probs=215.9
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKKG 91 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (454)
.+||+|||||++|+++|..|++.|++|+|||++ +||.|.+.... ..++.+
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~~~~~~~---------------------~~~~~~------- 64 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQLTEAGIV---------------------DDYLGL------- 64 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGGGGCCEE---------------------CCSTTS-------
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCeecccccc---------------------cccCCC-------
Confidence 479999999999999999999999999999997 99999853210 000111
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccC
Q 044575 92 RDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATG 171 (454)
Q Consensus 92 ~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG 171 (454)
......++.+++.++++++++. +.+ ++|.+++..++ .|.|.+.++. ++.||+||+|||
T Consensus 65 ----~~~~~~~~~~~~~~~~~~~~v~--~~~-~~v~~i~~~~~----------~~~v~~~~g~-----~~~~d~lvlAtG 122 (323)
T 3f8d_A 65 ----IEIQASDMIKVFNKHIEKYEVP--VLL-DIVEKIENRGD----------EFVVKTKRKG-----EFKADSVILGIG 122 (323)
T ss_dssp ----TTEEHHHHHHHHHHHHHTTTCC--EEE-SCEEEEEEC------------CEEEEESSSC-----EEEEEEEEECCC
T ss_pred ----CCCCHHHHHHHHHHHHHHcCCE--EEE-EEEEEEEecCC----------EEEEEECCCC-----EEEcCEEEECcC
Confidence 1135689999999999999887 777 89999987643 7888887654 789999999999
Q ss_pred CCCCCCCCCCCCcCCccceeEEeecCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCcCc--cchhhh-
Q 044575 172 HYSYPRLPSIKGMDKWKRKQMHSHIYRVPEPFRNEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNISE--GLSKVI- 248 (454)
Q Consensus 172 ~~~~p~~p~i~G~~~~~~~~~~~~~~~~~~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~~~--~~~~~l- 248 (454)
+.|+.|.+||.+.+.+..+|...+.....+.+++|+|||+|.+|+|+|..|.+.+.+|+++.+.+.+.+ .+.+.+
T Consensus 123 --~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~ 200 (323)
T 3f8d_A 123 --VKRRKLGVPGEQEFAGRGISYCSVADAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKAQPIYVETVK 200 (323)
T ss_dssp --CEECCCCCTTTTTTBTTTEESCHHHHGGGGTTCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCSCHHHHHHHH
T ss_pred --CCCccCCCCchhhhcCCceEEeccCCHhHcCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCcCHHHHHHHH
Confidence 779999999998877777766655555566789999999999999999999999999999999987743 222223
Q ss_pred cc-CCCeEEcCceeEEecCC---cEEEeC---CC--EEeeceEEEccCcccCCcCCC-------CCCceeeCCCCccccc
Q 044575 249 SK-HNNLHLHPQIDCLREDG---RVTFVD---GC--WVTADTILYCTGYSYSFPFLD-------TKGIVVVDDDRVGPLY 312 (454)
Q Consensus 249 ~~-~~~i~~~~~v~~v~~~~---~v~~~d---G~--~i~~D~vI~atG~~~~~~~l~-------~~g~i~v~~~~~~~~~ 312 (454)
.+ .++++.+..|+++..++ .|++.+ |+ ++++|.||+|+|++|+.+++. +.|.+.+|++..
T Consensus 201 ~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~g~~~~~~g~i~vd~~~~---- 276 (323)
T 3f8d_A 201 KKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMR---- 276 (323)
T ss_dssp TCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCEECCHHHHHHTTCCBCTTSSBCCCTTCB----
T ss_pred hCCCcEEEeCCEEEEEeccCceeEEEEEECCCCceEEEEcCEEEEEECCCCChhHHhhcCeeecCCCcEecCCCce----
Confidence 33 34677778899987654 477776 87 688999999999999977643 345666665443
Q ss_pred CcccCCCCCCCceEecccccc----cchhHHHHHHHHHHHHHc
Q 044575 313 EHTFPPSLAPSLSFVGIPRKL----IGFPFFESQAKWIAQLLS 351 (454)
Q Consensus 313 ~~~~~~~~~p~l~~iG~~~~~----~~~~~a~~qa~~~a~~i~ 351 (454)
+..|++|++|++... .....|..||+.+|.++.
T Consensus 277 ------t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~ 313 (323)
T 3f8d_A 277 ------TSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAY 313 (323)
T ss_dssp ------CSSTTEEECSTTBSTTTTCCCHHHHHHHHHHHHHHHH
T ss_pred ------ecCCCEEEcceecCCCCcccceeehhhHHHHHHHHHH
Confidence 356999999999874 345788899999987764
No 12
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=1.8e-35 Score=285.86 Aligned_cols=284 Identities=19% Similarity=0.208 Sum_probs=212.4
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKKG 91 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (454)
.+||+|||||++|+++|..|++.|++|+|||+++.+||.|... ++... +..+..++
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~------------~~~~~------~~~~~~~~------ 60 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTAL------------YPEKY------IYDVAGFP------ 60 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHHT------------CTTSE------ECCSTTCS------
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeecc------------CCCce------eeccCCCC------
Confidence 4799999999999999999999999999999999999999642 11000 00011111
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccC
Q 044575 92 RDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATG 171 (454)
Q Consensus 92 ~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG 171 (454)
.....++.+++.++++++++. ++++++|.+++..++ .|+|++.++. ++.||+||+|||
T Consensus 61 -----~~~~~~~~~~l~~~~~~~~~~--~~~~~~v~~i~~~~~----------~~~v~~~~g~-----~~~~~~lv~AtG 118 (335)
T 2zbw_A 61 -----KVYAKDLVKGLVEQVAPFNPV--YSLGERAETLEREGD----------LFKVTTSQGN-----AYTAKAVIIAAG 118 (335)
T ss_dssp -----SEEHHHHHHHHHHHHGGGCCE--EEESCCEEEEEEETT----------EEEEEETTSC-----EEEEEEEEECCT
T ss_pred -----CCCHHHHHHHHHHHHHHcCCE--EEeCCEEEEEEECCC----------EEEEEECCCC-----EEEeCEEEECCC
Confidence 124578889999998888876 888999999987643 6888776543 689999999999
Q ss_pred CCC-CCCCCCCCCcCCccceeEEeecCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCcCcc------c
Q 044575 172 HYS-YPRLPSIKGMDKWKRKQMHSHIYRVPEPFRNEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNISEG------L 244 (454)
Q Consensus 172 ~~~-~p~~p~i~G~~~~~~~~~~~~~~~~~~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~~~~------~ 244 (454)
..+ .|..|++||.+.+.+..+|.. ++..+.+.+++|+|||+|.+|+|+|..|++.+.+|+++.|++.+.+. +
T Consensus 119 ~~~~~p~~~~i~g~~~~~~~~~~~~-~~~~~~~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~~~~~~~~l 197 (335)
T 2zbw_A 119 VGAFEPRRIGAPGEREFEGRGVYYA-VKSKAEFQGKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRAHEASVKEL 197 (335)
T ss_dssp TSEEEECCCCCTTTTTTBTTTEESS-CSCGGGGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCCSCHHHHHHH
T ss_pred CCCCCCCCCCCCChhhccCcEEEEe-cCchhhcCCCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccCccHHHHHHH
Confidence 432 688888999877665444433 33444567899999999999999999999999999999998876322 2
Q ss_pred hhhhcc-CCCeEEcCceeEEecCC---cEEEe---CC--CEEeeceEEEccCcccCCcCCCC------CCceeeCCCCcc
Q 044575 245 SKVISK-HNNLHLHPQIDCLREDG---RVTFV---DG--CWVTADTILYCTGYSYSFPFLDT------KGIVVVDDDRVG 309 (454)
Q Consensus 245 ~~~l~~-~~~i~~~~~v~~v~~~~---~v~~~---dG--~~i~~D~vI~atG~~~~~~~l~~------~g~i~v~~~~~~ 309 (454)
.+.+.+ .++++.+..|.++..++ .|.+. +| +++++|.||+|+|++|+.+++.. .|.+.+|++..
T Consensus 198 ~~~l~~~gv~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~~~~~g~i~vd~~~~- 276 (335)
T 2zbw_A 198 MKAHEEGRLEVLTPYELRRVEGDERVRWAVVFHNQTQEELALEVDAVLILAGYITKLGPLANWGLALEKNKIKVDTTMA- 276 (335)
T ss_dssp HHHHHTTSSEEETTEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCEEEECGGGGGSCCCEETTEEECCTTCB-
T ss_pred HhccccCCeEEecCCcceeEccCCCeeEEEEEECCCCceEEEecCEEEEeecCCCCchHhhhcceeccCCeeeeCCCCC-
Confidence 222222 35777788888887653 47777 77 46889999999999999877653 34555555433
Q ss_pred cccCcccCCCCCCCceEecccccc----cchhHHHHHHHHHHHHHcC
Q 044575 310 PLYEHTFPPSLAPSLSFVGIPRKL----IGFPFFESQAKWIAQLLSG 352 (454)
Q Consensus 310 ~~~~~~~~~~~~p~l~~iG~~~~~----~~~~~a~~qa~~~a~~i~g 352 (454)
+..|++|++||+... .....|..||+.+|+++.+
T Consensus 277 ---------t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~ 314 (335)
T 2zbw_A 277 ---------TSIPGVYACGDIVTYPGKLPLIVLGFGEAAIAANHAAA 314 (335)
T ss_dssp ---------CSSTTEEECSTTEECTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred ---------CCCCCEEEeccccccCcchhhhhhhHHHHHHHHHHHHH
Confidence 356999999999853 2346788899998887753
No 13
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=7.4e-35 Score=276.42 Aligned_cols=273 Identities=13% Similarity=0.127 Sum_probs=210.2
Q ss_pred CcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCCCC
Q 044575 13 KNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKKGR 92 (454)
Q Consensus 13 ~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (454)
+||+|||||++|+++|..|++.|++|+|||+++..++.+... . ++
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~~------------------------~---~~-------- 47 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASHS------------------------H---GF-------- 47 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSCC------------------------C---SS--------
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchhh------------------------c---CC--------
Confidence 689999999999999999999999999999975332221100 0 00
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccCC
Q 044575 93 DVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATGH 172 (454)
Q Consensus 93 ~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG~ 172 (454)
......+..++..++.+++.+++.. ..++++|++++..++ .|.|++.++. ++.||+||+|||
T Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~~v~~i~~~~~----------~~~v~~~~g~-----~~~~d~vviAtG- 109 (297)
T 3fbs_A 48 LGQDGKAPGEIIAEARRQIERYPTI--HWVEGRVTDAKGSFG----------EFIVEIDGGR-----RETAGRLILAMG- 109 (297)
T ss_dssp TTCTTCCHHHHHHHHHHHHTTCTTE--EEEESCEEEEEEETT----------EEEEEETTSC-----EEEEEEEEECCC-
T ss_pred cCCCCCCHHHHHHHHHHHHHhcCCe--EEEEeEEEEEEEcCC----------eEEEEECCCC-----EEEcCEEEECCC-
Confidence 1112345688999999988876321 233669999987643 6888887654 789999999999
Q ss_pred CCCCCCCCCCCcCCccceeEEeecCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCC-cCccchhhhccC
Q 044575 173 YSYPRLPSIKGMDKWKRKQMHSHIYRVPEPFRNEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLN-ISEGLSKVISKH 251 (454)
Q Consensus 173 ~~~p~~p~i~G~~~~~~~~~~~~~~~~~~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~-~~~~~~~~l~~~ 251 (454)
+.|+.|.+||.+.+.+...|...+.....+++++|+|||+|.+|+|+|..|++.+ +|+++.+.+. +.+.+.+.+.+.
T Consensus 110 -~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~~~~~~~~~~l~~~ 187 (297)
T 3fbs_A 110 -VTDELPEIAGLRERWGSAVFHCPYCHGYELDQGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIVEPDADQHALLAAR 187 (297)
T ss_dssp -CEEECCCCBTTGGGBTTTEESCHHHHTGGGTTCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTCCCCHHHHHHHHHT
T ss_pred -CCCCCCCCCCchhhcCCeeEEcccCcchhhcCCEEEEEecCccHHHHHHHhhhcC-cEEEEECCCCCCCHHHHHHHHHC
Confidence 7899999999988777777776665555667899999999999999999999998 9999998775 344444445444
Q ss_pred -CCeEEcCceeEEecCCcEEEeCCCEEeeceEEEccCcccCCcCCCC---------CC-ceeeCCCCcccccCcccCCCC
Q 044575 252 -NNLHLHPQIDCLREDGRVTFVDGCWVTADTILYCTGYSYSFPFLDT---------KG-IVVVDDDRVGPLYEHTFPPSL 320 (454)
Q Consensus 252 -~~i~~~~~v~~v~~~~~v~~~dG~~i~~D~vI~atG~~~~~~~l~~---------~g-~i~v~~~~~~~~~~~~~~~~~ 320 (454)
++++ ...|+++..++.|.+.||+++++|.||+|+|++|+.+++.. .| .+.+|++.. ++
T Consensus 188 gv~i~-~~~v~~i~~~~~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~g~~~~~~~~G~~i~vd~~~~----------t~ 256 (297)
T 3fbs_A 188 GVRVE-TTRIREIAGHADVVLADGRSIALAGLFTQPKLRITVDWIEKLGCAVEEGPMGSTIVTDPMKQ----------TT 256 (297)
T ss_dssp TCEEE-CSCEEEEETTEEEEETTSCEEEESEEEECCEEECCCSCHHHHTCCEEEETTEEEECCCTTCB----------CS
T ss_pred CcEEE-cceeeeeecCCeEEeCCCCEEEEEEEEEccCcccCchhHHhcCCccccCCCCceEEeCCCCc----------cC
Confidence 4565 48899997664699999999999999999999999887542 23 455565433 45
Q ss_pred CCCceEeccccc-ccchhHHHHHHHHHHHHHc
Q 044575 321 APSLSFVGIPRK-LIGFPFFESQAKWIAQLLS 351 (454)
Q Consensus 321 ~p~l~~iG~~~~-~~~~~~a~~qa~~~a~~i~ 351 (454)
.|++|++||+.. ......|..||+.+|.++.
T Consensus 257 ~~~vya~GD~~~~~~~~~~A~~~g~~aa~~i~ 288 (297)
T 3fbs_A 257 ARGIFACGDVARPAGSVALAVGDGAMAGAAAH 288 (297)
T ss_dssp STTEEECSGGGCTTCCHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeecCCchHHHHHHHHhHHHHHHHHH
Confidence 799999999987 4556899999999998774
No 14
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=100.00 E-value=1.7e-34 Score=281.90 Aligned_cols=288 Identities=21% Similarity=0.243 Sum_probs=212.3
Q ss_pred ccCCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCC
Q 044575 9 CAQSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVL 88 (454)
Q Consensus 9 ~~~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (454)
|+..+||+|||||++|+++|..|++.|++|+|||+++.+||.|.... +.+ .. .....++
T Consensus 11 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~--~~~----~~------------~~~~~~~--- 69 (360)
T 3ab1_A 11 HHDMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAALY--PEK----HI------------YDVAGFP--- 69 (360)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTC--TTS----EE------------CCSTTCS---
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcccccC--CCc----cc------------ccCCCCC---
Confidence 44568999999999999999999999999999999999999996321 000 00 0011111
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEE
Q 044575 89 KKGRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVV 168 (454)
Q Consensus 89 ~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVi 168 (454)
.....++.+++.+.++++++. ++++++|.+++..++. .|+|++.++. ++.||+||+
T Consensus 70 --------~~~~~~~~~~l~~~~~~~~~~--~~~~~~v~~i~~~~~~---------~~~v~~~~g~-----~~~~~~li~ 125 (360)
T 3ab1_A 70 --------EVPAIDLVESLWAQAERYNPD--VVLNETVTKYTKLDDG---------TFETRTNTGN-----VYRSRAVLI 125 (360)
T ss_dssp --------SEEHHHHHHHHHHHHHTTCCE--EECSCCEEEEEECTTS---------CEEEEETTSC-----EEEEEEEEE
T ss_pred --------CCCHHHHHHHHHHHHHHhCCE--EEcCCEEEEEEECCCc---------eEEEEECCCc-----EEEeeEEEE
Confidence 124578889999999888876 8889999999986543 6888876554 789999999
Q ss_pred ccCCCC-CCCCCCCCC-cCCccceeEEeecCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCcCcc--c
Q 044575 169 ATGHYS-YPRLPSIKG-MDKWKRKQMHSHIYRVPEPFRNEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNISEG--L 244 (454)
Q Consensus 169 AtG~~~-~p~~p~i~G-~~~~~~~~~~~~~~~~~~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~~~~--~ 244 (454)
|||..+ .|..|++|| .+.+.+..+|.. ++....+.+++|+|||+|.+|+|+|..|++.+.+|+++.|.+.+.+. +
T Consensus 126 AtG~~~~~~~~~~i~g~~~~~~~~~v~~~-~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~~~~ 204 (360)
T 3ab1_A 126 AAGLGAFEPRKLPQLGNIDHLTGSSVYYA-VKSVEDFKGKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQGHGKT 204 (360)
T ss_dssp CCTTCSCCBCCCGGGCCCTTTBTTTEESS-CSCGGGGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSSCSHH
T ss_pred ccCCCcCCCCCCCCCCchhhCcCceEEEe-cCCHHHcCCCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCCCHHH
Confidence 999543 678888888 766665544433 34445567899999999999999999999999999999998876322 2
Q ss_pred hhh----hcc-CCCeEEcCceeEEecC-C---cEEEe--CC--CEEeeceEEEccCcccCCcCCCC------CCceeeCC
Q 044575 245 SKV----ISK-HNNLHLHPQIDCLRED-G---RVTFV--DG--CWVTADTILYCTGYSYSFPFLDT------KGIVVVDD 305 (454)
Q Consensus 245 ~~~----l~~-~~~i~~~~~v~~v~~~-~---~v~~~--dG--~~i~~D~vI~atG~~~~~~~l~~------~g~i~v~~ 305 (454)
.+. +.+ .++++.+..|+++..+ + .|.+. +| +++++|.||+|+|+.|+.+++.. +|.+.+|+
T Consensus 205 ~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~~~~~g~i~vd~ 284 (360)
T 3ab1_A 205 AHEVERARANGTIDVYLETEVASIEESNGVLTRVHLRSSDGSKWTVEADRLLILIGFKSNLGPLARWDLELYENALVVDS 284 (360)
T ss_dssp HHSSHHHHHHTSEEEESSEEEEEEEEETTEEEEEEEEETTCCEEEEECSEEEECCCBCCSCGGGGGSSCCEETTEEECCT
T ss_pred HHHHHHHhhcCceEEEcCcCHHHhccCCCceEEEEEEecCCCeEEEeCCEEEECCCCCCCHHHHHhhccccccCeeeecC
Confidence 222 211 2467777788888754 2 46675 77 46889999999999999877653 34555655
Q ss_pred CCcccccCcccCCCCCCCceEecccccc----cchhHHHHHHHHHHHHHcC
Q 044575 306 DRVGPLYEHTFPPSLAPSLSFVGIPRKL----IGFPFFESQAKWIAQLLSG 352 (454)
Q Consensus 306 ~~~~~~~~~~~~~~~~p~l~~iG~~~~~----~~~~~a~~qa~~~a~~i~g 352 (454)
+.. +..|++|++||+... .....|..||+.+|.++.+
T Consensus 285 ~~~----------t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~ 325 (360)
T 3ab1_A 285 HMK----------TSVDGLYAAGDIAYYPGKLKIIQTGLSEATMAVRHSLS 325 (360)
T ss_dssp TSB----------CSSTTEEECSTTEECTTCCCSHHHHHHHHHHHHHHHHH
T ss_pred CCc----------CCCCCEEEecCccCCCCccceeehhHHHHHHHHHHHHh
Confidence 433 356999999999853 2346788899988877753
No 15
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=100.00 E-value=1e-34 Score=280.62 Aligned_cols=291 Identities=16% Similarity=0.144 Sum_probs=214.9
Q ss_pred cCCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeC----CCCCcccccCCCCCCCCccccccccceecCCccccccCCCC
Q 044575 10 AQSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQN----HDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFP 85 (454)
Q Consensus 10 ~~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~----~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (454)
...+||+|||||++|+++|..|++.|++|+|||+. ..+||.|.+... ...++
T Consensus 20 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~~---------------------~~~~~--- 75 (338)
T 3itj_A 20 HVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTTE---------------------IENFP--- 75 (338)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSSE---------------------ECCST---
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccchh---------------------hcccC---
Confidence 34689999999999999999999999999999994 478999875321 01111
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCE
Q 044575 86 FVLKKGRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDA 165 (454)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~ 165 (454)
..+.+....++..|+.++++++++. +++++ |.+++.... .|.+++....+ ..++.||+
T Consensus 76 -------~~~~~~~~~~~~~~~~~~~~~~gv~--i~~~~-v~~i~~~~~----------~~~v~~~~~~~--~~~~~~d~ 133 (338)
T 3itj_A 76 -------GFPDGLTGSELMDRMREQSTKFGTE--IITET-VSKVDLSSK----------PFKLWTEFNED--AEPVTTDA 133 (338)
T ss_dssp -------TCTTCEEHHHHHHHHHHHHHHTTCE--EECSC-EEEEECSSS----------SEEEEETTCSS--SCCEEEEE
T ss_pred -------CCcccCCHHHHHHHHHHHHHHcCCE--EEEeE-EEEEEEcCC----------EEEEEEEecCC--CcEEEeCE
Confidence 1223356789999999999999987 88887 999986543 67777642111 12679999
Q ss_pred EEEccCCCCCCCCCCCCCcCCccceeEEeecCCCCC--CCCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCcCc-
Q 044575 166 VVVATGHYSYPRLPSIKGMDKWKRKQMHSHIYRVPE--PFRNEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNISE- 242 (454)
Q Consensus 166 vViAtG~~~~p~~p~i~G~~~~~~~~~~~~~~~~~~--~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~~~- 242 (454)
||+||| +.|+.|.+||.+.+.+..++...+.... .+.+++|+|||+|.+|+|+|..|.+.+.+|+++.+.+.+..
T Consensus 134 vvlAtG--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~~ 211 (338)
T 3itj_A 134 IILATG--ASAKRMHLPGEETYWQKGISACAVCDGAVPIFRNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRAS 211 (338)
T ss_dssp EEECCC--EEECCCCCTTHHHHBTTTEESCHHHHTTSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCSC
T ss_pred EEECcC--CCcCCCCCCCchhccCccEEEchhcccchhhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCCC
Confidence 999999 7899999999877666666665443333 45789999999999999999999999999999999887643
Q ss_pred -cchhhh-cc-CCCeEEcCceeEEecCC----cEEEeC-----CCEEeeceEEEccCcccCCcCCCCCCceeeCCCCccc
Q 044575 243 -GLSKVI-SK-HNNLHLHPQIDCLREDG----RVTFVD-----GCWVTADTILYCTGYSYSFPFLDTKGIVVVDDDRVGP 310 (454)
Q Consensus 243 -~~~~~l-~~-~~~i~~~~~v~~v~~~~----~v~~~d-----G~~i~~D~vI~atG~~~~~~~l~~~g~i~v~~~~~~~ 310 (454)
.+.+.+ .. .++++.+..|+++..++ .|++.+ ++++++|.||+|||+.|+.+++.. .+.+++.....
T Consensus 212 ~~~~~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~~--~l~~~~~G~i~ 289 (338)
T 3itj_A 212 TIMQKRAEKNEKIEILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPVSGLFYAIGHTPATKIVAG--QVDTDEAGYIK 289 (338)
T ss_dssp HHHHHHHHHCTTEEEECSEEEEEEEESSSSEEEEEEEETTTTEEEEEECSEEEECSCEEECCGGGBT--TBCBCTTSCBC
T ss_pred HHHHHHHHhcCCeEEeecceeEEEEcccCcEEEEEEEECCCCceEEEEeCEEEEEeCCCCChhHhhC--ceEecCCCcEE
Confidence 233333 33 45777888899997654 277776 457889999999999999888764 23444332211
Q ss_pred ccCcccCCCCCCCceEecccccc--cchhHHHHHHHHHHHHHc
Q 044575 311 LYEHTFPPSLAPSLSFVGIPRKL--IGFPFFESQAKWIAQLLS 351 (454)
Q Consensus 311 ~~~~~~~~~~~p~l~~iG~~~~~--~~~~~a~~qa~~~a~~i~ 351 (454)
..+.... +..|++|++||+... .....|..||+.+|.++.
T Consensus 290 v~~~~~~-t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~ 331 (338)
T 3itj_A 290 TVPGSSL-TSVPGFFAAGDVQDSKYRQAITSAGSGCMAALDAE 331 (338)
T ss_dssp CCTTSSB-CSSTTEEECGGGGCSSCCCHHHHHHHHHHHHHHHH
T ss_pred EcCcccc-cCCCCEEEeeccCCCCccceeeehhhhHHHHHHHH
Confidence 1111222 356999999999853 456788899999887764
No 16
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=100.00 E-value=1.7e-34 Score=276.12 Aligned_cols=285 Identities=18% Similarity=0.215 Sum_probs=210.5
Q ss_pred CcEEEECcChHHHHHHHHHHHcCC-cEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCCC
Q 044575 13 KNVCVIGAGPSGLVAARELRKEGH-RVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKKG 91 (454)
Q Consensus 13 ~~VvIIGaG~aGl~aA~~l~~~g~-~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (454)
+||+|||||++|+++|..|++.|+ +|+|||++ .+||.|.+.... ..++++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~-~~gg~~~~~~~~---------------------~~~~~~------- 52 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG-MPGGQITGSSEI---------------------ENYPGV------- 52 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSS-STTCGGGGCSCB---------------------CCSTTC-------
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCC-CCCccccccccc---------------------ccCCCC-------
Confidence 689999999999999999999999 99999994 789998754221 001111
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccC
Q 044575 92 RDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATG 171 (454)
Q Consensus 92 ~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG 171 (454)
+......++.+++.++++++++. +++ ++|.+++..++ .|+|++.++. ++.||+||+|||
T Consensus 53 ---~~~~~~~~~~~~l~~~~~~~~v~--~~~-~~v~~i~~~~~----------~~~v~~~~g~-----~~~~~~vv~AtG 111 (311)
T 2q0l_A 53 ---KEVVSGLDFMQPWQEQCFRFGLK--HEM-TAVQRVSKKDS----------HFVILAEDGK-----TFEAKSVIIATG 111 (311)
T ss_dssp ---CSCBCHHHHHHHHHHHHHTTSCE--EEC-SCEEEEEEETT----------EEEEEETTSC-----EEEEEEEEECCC
T ss_pred ---cccCCHHHHHHHHHHHHHHcCCE--EEE-EEEEEEEEcCC----------EEEEEEcCCC-----EEECCEEEECCC
Confidence 12346688999999999888876 666 78999987542 6888776543 789999999999
Q ss_pred CCCCCCCCCCCCcCCccceeEEeecCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCcC--ccchhhhc
Q 044575 172 HYSYPRLPSIKGMDKWKRKQMHSHIYRVPEPFRNEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNIS--EGLSKVIS 249 (454)
Q Consensus 172 ~~~~p~~p~i~G~~~~~~~~~~~~~~~~~~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~~--~~~~~~l~ 249 (454)
+.|+.|++||.+.+.+..+|...+.....+.+++|+|||+|.+|+|+|..|++.+.+|+++.|++.+. +.+.+.+.
T Consensus 112 --~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~l~ 189 (311)
T 2q0l_A 112 --GSPKRTGIKGESEYWGKGVSTCATCDGFFYKNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFRCAPITLEHAK 189 (311)
T ss_dssp --EEECCCCCBTHHHHBTTTEESCHHHHGGGGTTSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCCSCHHHHHHHH
T ss_pred --CCCCCCCCCChhhccCCcEEEeecCChhhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccCCCHHHHHHHh
Confidence 78899999998766555566544433334567999999999999999999999999999999988763 22333333
Q ss_pred c--CCCeEEcCceeEEecC-C---cEEEe---CCC--EEeeceEEEccCcccCCcCCCCCC---ceeeCCCCcccccCcc
Q 044575 250 K--HNNLHLHPQIDCLRED-G---RVTFV---DGC--WVTADTILYCTGYSYSFPFLDTKG---IVVVDDDRVGPLYEHT 315 (454)
Q Consensus 250 ~--~~~i~~~~~v~~v~~~-~---~v~~~---dG~--~i~~D~vI~atG~~~~~~~l~~~g---~i~v~~~~~~~~~~~~ 315 (454)
+ .++++.+..++++..+ + .|.+. +|+ ++++|.||+|+|++|+.+++...+ .+.+|+........+
T Consensus 190 ~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~g~~~~l~~~~~g~i~vd~~- 268 (311)
T 2q0l_A 190 NNDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGFFIFVGYDVNNAVLKQEDNSMLCKCDEYGSIVVDFS- 268 (311)
T ss_dssp TCTTEEEETTEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCEEECCGGGBCTTSCBSSCBCTTSCBCCCTT-
T ss_pred hCCCeEEEeCCEEEEEECCCCcEeEEEEEecCCCceEEEecCEEEEEecCccChhhhhcccccceeEeccCCCEEeCCc-
Confidence 2 3466777888888754 2 36776 676 688999999999999988876432 133333221111111
Q ss_pred cCCCCCCCceEecccccc--cchhHHHHHHHHHHHHHc
Q 044575 316 FPPSLAPSLSFVGIPRKL--IGFPFFESQAKWIAQLLS 351 (454)
Q Consensus 316 ~~~~~~p~l~~iG~~~~~--~~~~~a~~qa~~~a~~i~ 351 (454)
+. ++.|++|++||+... .....|..||+.+|.++.
T Consensus 269 ~~-t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~ 305 (311)
T 2q0l_A 269 MK-TNVQGLFAAGDIRIFAPKQVVCAASDGATAALSVI 305 (311)
T ss_dssp CB-CSSTTEEECSTTBTTCCCCHHHHHHHHHHHHHHHH
T ss_pred cc-cCCCCeEEcccccCcchHHHHHHHHhHHHHHHHHH
Confidence 22 356999999999864 346789999999998774
No 17
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=100.00 E-value=1.7e-34 Score=276.01 Aligned_cols=279 Identities=16% Similarity=0.184 Sum_probs=208.8
Q ss_pred CcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCCCC
Q 044575 13 KNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKKGR 92 (454)
Q Consensus 13 ~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (454)
+||+|||||++|+++|..|++.|++|+|||+ .+||.|...... ..+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~--~~gG~~~~~~~~------------------------~~~-------- 47 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSARKGIRTGLMGE--RFGGQILDTVDI------------------------ENY-------- 47 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECS--STTGGGGGCCEE------------------------CCB--------
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEeC--CCCceecccccc------------------------ccc--------
Confidence 6899999999999999999999999999986 589998743110 000
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccCC
Q 044575 93 DVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATGH 172 (454)
Q Consensus 93 ~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG~ 172 (454)
....+....++.+++.++++++++. ++++++|..++..... .. .|.|++.++. ++.||+||+|||
T Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~v~--~~~~~~v~~i~~~~~~------~~-~~~v~~~~g~-----~~~~~~lv~AtG- 112 (310)
T 1fl2_A 48 ISVPKTEGQKLAGALKVHVDEYDVD--VIDSQSASKLIPAAVE------GG-LHQIETASGA-----VLKARSIIVATG- 112 (310)
T ss_dssp TTBSSEEHHHHHHHHHHHHHTSCEE--EECSCCEEEEECCSST------TC-CEEEEETTSC-----EEEEEEEEECCC-
T ss_pred cCcCCCCHHHHHHHHHHHHHHcCCe--EEccCEEEEEEecccC------Cc-eEEEEECCCC-----EEEeCEEEECcC-
Confidence 0112235578899999999888876 8889899999865321 01 6888876654 689999999999
Q ss_pred CCCCCCCCCCCcCCccceeEEeecCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCcC--ccchhhhcc
Q 044575 173 YSYPRLPSIKGMDKWKRKQMHSHIYRVPEPFRNEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNIS--EGLSKVISK 250 (454)
Q Consensus 173 ~~~p~~p~i~G~~~~~~~~~~~~~~~~~~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~~--~~~~~~l~~ 250 (454)
+.|..|++||.+.+.+..+|.........+.+++|+|||+|.+|+|+|..|++.+.+|++++|.+.+. +.+.+.+.+
T Consensus 113 -~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~l~~ 191 (310)
T 1fl2_A 113 -AKWRNMNVPGEDQYRTKGVTYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKADQVLQDKLRS 191 (310)
T ss_dssp -EEECCCCCTTTTTTBTTTEESCHHHHGGGGBTCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCCSCHHHHHHHHT
T ss_pred -CCcCCCCCCChhhcccceeEEeccCcHhhcCCCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccCccHHHHHHHhh
Confidence 77888889998877655556544322334567999999999999999999999999999999988763 223333433
Q ss_pred --CCCeEEcCceeEEecCC----cEEEeC---CC--EEeeceEEEccCcccCCcCCCC------CCceeeCCCCcccccC
Q 044575 251 --HNNLHLHPQIDCLREDG----RVTFVD---GC--WVTADTILYCTGYSYSFPFLDT------KGIVVVDDDRVGPLYE 313 (454)
Q Consensus 251 --~~~i~~~~~v~~v~~~~----~v~~~d---G~--~i~~D~vI~atG~~~~~~~l~~------~g~i~v~~~~~~~~~~ 313 (454)
.++++.+..++++..++ .|.+.+ |+ ++++|.||+|+|++|+.+++.. .|.+.+|++..
T Consensus 192 ~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~l~~~~~g~i~vd~~~~----- 266 (310)
T 1fl2_A 192 LKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIGLLPNTNWLEGAVERNRMGEIIIDAKCE----- 266 (310)
T ss_dssp CTTEEEESSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGTTTSCBCTTSCBCCCTTCB-----
T ss_pred CCCeEEecCCceEEEEcCCCcEEEEEEEECCCCcEEEEEcCEEEEeeCCccCchHHhccccccCCCcEEcCCCCc-----
Confidence 34677788888887542 367765 54 5789999999999999888753 23344444322
Q ss_pred cccCCCCCCCceEeccccccc--chhHHHHHHHHHHHHHc
Q 044575 314 HTFPPSLAPSLSFVGIPRKLI--GFPFFESQAKWIAQLLS 351 (454)
Q Consensus 314 ~~~~~~~~p~l~~iG~~~~~~--~~~~a~~qa~~~a~~i~ 351 (454)
++.|++|++||+...+ ....|..||+.+|.++.
T Consensus 267 -----t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~ 301 (310)
T 1fl2_A 267 -----TNVKGVFAAGDCTTVPYKQIIIATGEGAKASLSAF 301 (310)
T ss_dssp -----CSSTTEEECSTTBSCSSCCHHHHHHHHHHHHHHHH
T ss_pred -----cCCCCEEEeecccCCcchhhhhhHhhHHHHHHHHH
Confidence 4579999999998754 45788899999988764
No 18
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=100.00 E-value=2.8e-34 Score=274.86 Aligned_cols=276 Identities=18% Similarity=0.206 Sum_probs=193.5
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKKG 91 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (454)
.|||+||||||||++||.+|++.|++|+|||+ +.+||+|.+..|.+.. +.+
T Consensus 6 ~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~-~~~gG~~~~~~~i~~~---------------------p~~------- 56 (312)
T 4gcm_A 6 DFDIAIIGAGPAGMTAAVYASRANLKTVMIER-GIPGGQMANTEEVENF---------------------PGF------- 56 (312)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTGGGGGCSCBCCS---------------------TTC-------
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEec-CCCCCeeecccccCCc---------------------CCc-------
Confidence 59999999999999999999999999999998 4799999876653210 111
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccC
Q 044575 92 RDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATG 171 (454)
Q Consensus 92 ~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG 171 (454)
......++.........++... +..+..+...... ...+...++. ++.||+||||||
T Consensus 57 ----~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~------------~~~~~~~~~~-----~~~~d~liiAtG 113 (312)
T 4gcm_A 57 ----EMITGPDLSTKMFEHAKKFGAV--YQYGDIKSVEDKG------------EYKVINFGNK-----ELTAKAVIIATG 113 (312)
T ss_dssp ----SSBCHHHHHHHHHHHHHHTTCE--EEECCCCEEEECS------------SCEEEECSSC-----EEEEEEEEECCC
T ss_pred ----cccchHHHHHHHHHHHhhcccc--ccceeeeeeeeee------------cceeeccCCe-----EEEeceeEEccc
Confidence 1134466666666666666554 4445444443322 2223333333 789999999999
Q ss_pred CCCCCCCCCCCCcCCccceeEEeecCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCcCccchh---hh
Q 044575 172 HYSYPRLPSIKGMDKWKRKQMHSHIYRVPEPFRNEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNISEGLSK---VI 248 (454)
Q Consensus 172 ~~~~p~~p~i~G~~~~~~~~~~~~~~~~~~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~~~~~~~---~l 248 (454)
+.|+.|++||.+.+.+..+++....+...+++|+|+|||+|++|+|+|..|++.|.+||+++|.+++.+.... .+
T Consensus 114 --s~~~~~~ipG~~~~~~~~v~~~~~~~~~~~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~ 191 (312)
T 4gcm_A 114 --AEYKKIGVPGEQELGGRGVSYCAVCDGAFFKNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELRAQRILQDRAF 191 (312)
T ss_dssp --EEECCCCCTTTTTTBTTTEESCHHHHGGGGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCSCHHHHHHHH
T ss_pred --CccCcCCCCChhhhCCccEEeeeccCccccCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEecccccCcchhHHHHHH
Confidence 8999999999988877777766655555667899999999999999999999999999999999887543221 12
Q ss_pred ccCC-CeEEcCceeEEec-CC---c--EEE-e--CCCEEeeceEEEccCcccCCcCCC------CCCceeeCCCCccccc
Q 044575 249 SKHN-NLHLHPQIDCLRE-DG---R--VTF-V--DGCWVTADTILYCTGYSYSFPFLD------TKGIVVVDDDRVGPLY 312 (454)
Q Consensus 249 ~~~~-~i~~~~~v~~v~~-~~---~--v~~-~--dG~~i~~D~vI~atG~~~~~~~l~------~~g~i~v~~~~~~~~~ 312 (454)
.... .......+..... +. . ... . ++..+++|.|++++|..|+..++. ++|.|.+|++.+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~g~~~~~~~~~~~g~~~~~G~I~vd~~~~---- 267 (312)
T 4gcm_A 192 KNDKIDFIWSHTLKSINEKDGKVGSVTLTSTKDGSEETHEADGVFIYIGMKPLTAPFKDLGITNDVGYIVTKDDMT---- 267 (312)
T ss_dssp HCTTEEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGGGGTCBCTTSCBCCCTTSB----
T ss_pred HhcCcceeeecceeeeeccccccccceeeeecCCceeEEeeeeEEeecCCCcCchhHHhcceecCCCeEeeCCCCc----
Confidence 1111 1111111221111 11 0 111 1 234678999999999999987643 456677777665
Q ss_pred CcccCCCCCCCceEeccccccc--chhHHHHHHHHHHHHHc
Q 044575 313 EHTFPPSLAPSLSFVGIPRKLI--GFPFFESQAKWIAQLLS 351 (454)
Q Consensus 313 ~~~~~~~~~p~l~~iG~~~~~~--~~~~a~~qa~~~a~~i~ 351 (454)
|+.|++|++||+...+ ....|..|++.+|.++.
T Consensus 268 ------Ts~pgIyA~GDv~~~~~~~~~~A~~~G~~AA~~i~ 302 (312)
T 4gcm_A 268 ------TSVPGIFAAGDVRDKGLRQIVTATGDGSIAAQSAA 302 (312)
T ss_dssp ------CSSTTEEECSTTBSCSCCSHHHHHHHHHHHHHHHH
T ss_pred ------cCCCCEEEEeecCCCcchHHHHHHHHHHHHHHHHH
Confidence 5679999999998532 45688899999998764
No 19
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=100.00 E-value=2.6e-34 Score=274.98 Aligned_cols=287 Identities=21% Similarity=0.255 Sum_probs=212.7
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEE-EeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVV-LEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKK 90 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~v-ie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (454)
++||+|||||+||+++|..|++.|++|+| +|+ +.+||.|.+.... ..++
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~~~~~~~---------------------~~~~-------- 53 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQITSSSEI---------------------ENYP-------- 53 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGGGGCSCB---------------------CCST--------
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCceeeeecee---------------------ccCC--------
Confidence 47999999999999999999999999999 999 7799999854221 0011
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEcc
Q 044575 91 GRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVAT 170 (454)
Q Consensus 91 ~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAt 170 (454)
..+.+.+..++..|+.++++++++. ++++ +|.++ ..+... .|.+.+.... ++.||+||+||
T Consensus 54 --~~~~~~~~~~~~~~~~~~~~~~~v~--~~~~-~v~~i-~~~~~~--------~~~v~~~~~~-----~~~~d~lvlAt 114 (315)
T 3r9u_A 54 --GVAQVMDGISFMAPWSEQCMRFGLK--HEMV-GVEQI-LKNSDG--------SFTIKLEGGK-----TELAKAVIVCT 114 (315)
T ss_dssp --TCCSCBCHHHHHHHHHHHHTTTCCE--EECC-CEEEE-EECTTS--------CEEEEETTSC-----EEEEEEEEECC
T ss_pred --CCCCCCCHHHHHHHHHHHHHHcCcE--EEEE-EEEEE-ecCCCC--------cEEEEEecCC-----EEEeCEEEEee
Confidence 1122346789999999999999887 7777 88888 543111 6776444321 78999999999
Q ss_pred CCCCCCCCCCCCCcCCccceeEEeecCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCcCc--cc-hhh
Q 044575 171 GHYSYPRLPSIKGMDKWKRKQMHSHIYRVPEPFRNEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNISE--GL-SKV 247 (454)
Q Consensus 171 G~~~~p~~p~i~G~~~~~~~~~~~~~~~~~~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~~~--~~-~~~ 247 (454)
| +.|+.|.+||.+.+.+..+|+..+.....+.+++|+|||+|.+|+|+|..|.+.+.+|+++.+.+.+.. .+ .+.
T Consensus 115 G--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~ 192 (315)
T 3r9u_A 115 G--SAPKKAGFKGEDEFFGKGVSTCATCDGFFYKNKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFRAAPSTVEKV 192 (315)
T ss_dssp C--EEECCCCCBTTTTTBTTTEESCHHHHGGGGTTSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCBSCHHHHHHH
T ss_pred C--CCCCCCCCCChhhcCCCeEEeeecccccccCcCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCCCCHHHHHHH
Confidence 9 789999999998887777787766555556789999999999999999999999999999999887632 11 222
Q ss_pred hcc-CCCeEEcCceeEEecCC----cEEEe--CCC--EEeeceEEEccCcccCCcCCCC---CCceeeCCCCcccccCcc
Q 044575 248 ISK-HNNLHLHPQIDCLREDG----RVTFV--DGC--WVTADTILYCTGYSYSFPFLDT---KGIVVVDDDRVGPLYEHT 315 (454)
Q Consensus 248 l~~-~~~i~~~~~v~~v~~~~----~v~~~--dG~--~i~~D~vI~atG~~~~~~~l~~---~g~i~v~~~~~~~~~~~~ 315 (454)
+.+ .++++.++.|.++..++ .|++. +|+ ++++|.||+|+|++|+.+++.. .|.+..++...... ...
T Consensus 193 ~~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~~~~g~l~~~~~g~i~v-d~~ 271 (315)
T 3r9u_A 193 KKNEKIELITSASVDEVYGDKMGVAGVKVKLKDGSIRDLNVPGIFTFVGLNVRNEILKQDDSKFLCNMEEGGQVSV-DLK 271 (315)
T ss_dssp HHCTTEEEECSCEEEEEEEETTEEEEEEEECTTSCEEEECCSCEEECSCEEECCGGGBCTTSCBSSCBCTTSCBCC-CTT
T ss_pred HhcCCeEEEeCcEEEEEEcCCCcEEEEEEEcCCCCeEEeecCeEEEEEcCCCCchhhhcccccceeeecCCCcEEe-CCC
Confidence 322 34677788999987543 36676 887 6889999999999999887654 11133333221111 111
Q ss_pred cCCCCCCCceEeccccc--ccchhHHHHHHHHHHHHHc
Q 044575 316 FPPSLAPSLSFVGIPRK--LIGFPFFESQAKWIAQLLS 351 (454)
Q Consensus 316 ~~~~~~p~l~~iG~~~~--~~~~~~a~~qa~~~a~~i~ 351 (454)
+. ++.|++|++||+.. ......|..||+.+|.++.
T Consensus 272 ~~-t~~~~v~a~GD~~~~~~~~~~~A~~~g~~aa~~i~ 308 (315)
T 3r9u_A 272 MQ-TSVAGLFAAGDLRKDAPKQVICAAGDGAVAALSAM 308 (315)
T ss_dssp CB-CSSTTEEECGGGBTTCCCCHHHHHHHHHHHHHHHH
T ss_pred cc-cCCCCEEEeecccCCchhhhhhHHhhHHHHHHHHH
Confidence 12 35699999999974 3356789999999998764
No 20
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=100.00 E-value=6e-34 Score=273.38 Aligned_cols=287 Identities=18% Similarity=0.191 Sum_probs=207.5
Q ss_pred ccCCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCC
Q 044575 9 CAQSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVL 88 (454)
Q Consensus 9 ~~~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (454)
|...+||+|||||++|+++|..|++.|++|+|||+ ..+||.|....... .++.+
T Consensus 13 m~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~-~~~gg~~~~~~~~~---------------------~~~~~---- 66 (319)
T 3cty_A 13 KERDFDVVIVGAGAAGFSAAVYAARSGFSVAILDK-AVAGGLTAEAPLVE---------------------NYLGF---- 66 (319)
T ss_dssp -CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SSTTGGGGGCSCBC---------------------CBTTB----
T ss_pred ccCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeC-CCCCccccccchhh---------------------hcCCC----
Confidence 45568999999999999999999999999999999 57899887542110 00010
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEE
Q 044575 89 KKGRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVV 168 (454)
Q Consensus 89 ~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVi 168 (454)
......++.+++.+.++++++. +.+ .+|.+++...+ .|+|.+ ++. ++.||+||+
T Consensus 67 -------~~~~~~~~~~~~~~~~~~~~v~--~~~-~~v~~i~~~~~----------~~~v~~-~~~-----~~~~~~li~ 120 (319)
T 3cty_A 67 -------KSIVGSELAKLFADHAANYAKI--REG-VEVRSIKKTQG----------GFDIET-NDD-----TYHAKYVII 120 (319)
T ss_dssp -------SSBCHHHHHHHHHHHHHTTSEE--EET-CCEEEEEEETT----------EEEEEE-SSS-----EEEEEEEEE
T ss_pred -------cccCHHHHHHHHHHHHHHcCCE--EEE-eeEEEEEEeCC----------EEEEEE-CCC-----EEEeCEEEE
Confidence 1234578889999988888766 555 68989887542 677766 333 689999999
Q ss_pred ccCCCCCCCCCCCCCcCCccceeEEeecCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCcCc--cchh
Q 044575 169 ATGHYSYPRLPSIKGMDKWKRKQMHSHIYRVPEPFRNEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNISE--GLSK 246 (454)
Q Consensus 169 AtG~~~~p~~p~i~G~~~~~~~~~~~~~~~~~~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~~~--~~~~ 246 (454)
||| +.|+.|.+||.+.+.+..+|.........+.+++|+|||+|.+|+|+|..|++.+++|++++|.+.+.. .+.+
T Consensus 121 AtG--~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~~~~~l~~ 198 (319)
T 3cty_A 121 TTG--TTHKHLGVKGESEYFGKGTSYCSTCDGYLFKGKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYMCENAYVQ 198 (319)
T ss_dssp CCC--EEECCCCCBTTTTTBTTTEESCHHHHGGGGBTSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCCSCHHHHH
T ss_pred CCC--CCcccCCCCChHHhCCceEEEEEecchhhcCCCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccCCCHHHHH
Confidence 999 788999999987665444554333223335679999999999999999999999999999999876632 2333
Q ss_pred hh-ccCCCeEEcCceeEEecCC----cEEEe---CCC--EEeeceEEEccCcccCCcCCCCCCceeeCCCCcccccCccc
Q 044575 247 VI-SKHNNLHLHPQIDCLREDG----RVTFV---DGC--WVTADTILYCTGYSYSFPFLDTKGIVVVDDDRVGPLYEHTF 316 (454)
Q Consensus 247 ~l-~~~~~i~~~~~v~~v~~~~----~v~~~---dG~--~i~~D~vI~atG~~~~~~~l~~~g~i~v~~~~~~~~~~~~~ 316 (454)
.+ ...++++.+..++++..++ .|.+. +|+ ++++|.||+|||++|+.+++...| +.+++.......++ +
T Consensus 199 ~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~g-l~~~~~g~i~vd~~-~ 276 (319)
T 3cty_A 199 EIKKRNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIYVGLIPQTSFLKDSG-VKLDERGYIVVDSR-Q 276 (319)
T ss_dssp HHHHTTCCEECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCSEEEECCCEEECCGGGTTSC-CCBCTTSCBCCCTT-C
T ss_pred HHhcCCcEEEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecCEEEEeeCCccChHHHhhcc-ccccCCccEeCCCC-C
Confidence 33 3345788888899987553 36676 676 578999999999999988875322 22332211111111 1
Q ss_pred CCCCCCCceEecccccc--cchhHHHHHHHHHHHHHcC
Q 044575 317 PPSLAPSLSFVGIPRKL--IGFPFFESQAKWIAQLLSG 352 (454)
Q Consensus 317 ~~~~~p~l~~iG~~~~~--~~~~~a~~qa~~~a~~i~g 352 (454)
. +..|++|++||+... .....|..||+.+|.++..
T Consensus 277 ~-t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~ 313 (319)
T 3cty_A 277 R-TSVPGVYAAGDVTSGNFAQIASAVGDGCKAALSLYS 313 (319)
T ss_dssp B-CSSTTEEECSTTBTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred c-cCCCCEEEeecccCcchhhHHHHHHHHHHHHHHHHH
Confidence 2 457999999999865 3457899999999987743
No 21
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=9.8e-34 Score=273.83 Aligned_cols=286 Identities=18% Similarity=0.185 Sum_probs=207.9
Q ss_pred cCCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCC
Q 044575 10 AQSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLK 89 (454)
Q Consensus 10 ~~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (454)
+..+||+|||||++|+++|..|++.|++|+|||+. .+||.|.+.... ..++.+
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~~---------------------~~~~~~----- 64 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT-SFGGALMTTTDV---------------------ENYPGF----- 64 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS-SCSCGGGSCSCB---------------------CCSTTC-----
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCceeccchh---------------------hhcCCC-----
Confidence 45689999999999999999999999999999975 789988753210 001111
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEE-EEeecCCCeEEEEEeCEEEE
Q 044575 90 KGRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVV-KSKEKKADKVVEEVFDAVVV 168 (454)
Q Consensus 90 ~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~~~~d~vVi 168 (454)
+......++.+++.++++++++. +++++ |.+++. . . .|+| .+.++. ++.||+||+
T Consensus 65 -----~~~~~~~~~~~~l~~~~~~~~v~--~~~~~-v~~i~~-~-~---------~~~v~~~~~g~-----~~~~d~lvi 120 (335)
T 2a87_A 65 -----RNGITGPELMDEMREQALRFGAD--LRMED-VESVSL-H-G---------PLKSVVTADGQ-----THRARAVIL 120 (335)
T ss_dssp -----TTCBCHHHHHHHHHHHHHHTTCE--EECCC-EEEEEC-S-S---------SSEEEEETTSC-----EEEEEEEEE
T ss_pred -----CCCCCHHHHHHHHHHHHHHcCCE--EEEee-EEEEEe-C-C---------cEEEEEeCCCC-----EEEeCEEEE
Confidence 11135678999999999998887 77776 888876 2 2 6778 665443 789999999
Q ss_pred ccCCCCCCCCCCCCCcCCccceeEEeecCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCcC--ccch-
Q 044575 169 ATGHYSYPRLPSIKGMDKWKRKQMHSHIYRVPEPFRNEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNIS--EGLS- 245 (454)
Q Consensus 169 AtG~~~~p~~p~i~G~~~~~~~~~~~~~~~~~~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~~--~~~~- 245 (454)
||| +.|..|++||.+.+.+..+|+..+.....+.+++|+|||+|.+|+|+|..|++.+.+|++++|++.+. ..+.
T Consensus 121 AtG--~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~~~~~~~~ 198 (335)
T 2a87_A 121 AMG--AAARYLQVPGEQELLGRGVSSCATCDGFFFRDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFRASKIMLD 198 (335)
T ss_dssp CCC--EEECCCCCTHHHHTBTTTEESCHHHHGGGGTTCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCSSCTTHHH
T ss_pred CCC--CCccCCCCCchHhccCCceEEeeccchhhcCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCCccHHHHH
Confidence 999 78889999998766555566544333333567999999999999999999999999999999988763 2233
Q ss_pred hhhc-cCCCeEEcCceeEEecCC---cEEEe---CC--CEEeeceEEEccCcccCCcCCCCCCceeeCCCCcccccCccc
Q 044575 246 KVIS-KHNNLHLHPQIDCLREDG---RVTFV---DG--CWVTADTILYCTGYSYSFPFLDTKGIVVVDDDRVGPLYEHTF 316 (454)
Q Consensus 246 ~~l~-~~~~i~~~~~v~~v~~~~---~v~~~---dG--~~i~~D~vI~atG~~~~~~~l~~~g~i~v~~~~~~~~~~~~~ 316 (454)
+.+. ..++++.+..|+++..++ .|.+. +| +++++|.||+|+|++|+.++++. .+.+|+.......++..
T Consensus 199 ~~~~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~~--~l~~~~~G~i~vd~~~~ 276 (335)
T 2a87_A 199 RARNNDKIRFLTNHTVVAVDGDTTVTGLRVRDTNTGAETTLPVTGVFVAIGHEPRSGLVRE--AIDVDPDGYVLVQGRTT 276 (335)
T ss_dssp HHHHCTTEEEECSEEEEEEECSSSCCEEEEEEETTSCCEEECCSCEEECSCEEECCTTTBT--TBCBCTTSCBCCSTTSS
T ss_pred HHhccCCcEEEeCceeEEEecCCcEeEEEEEEcCCCceEEeecCEEEEccCCccChhHhhc--ccccCCCccEEeCCCCC
Confidence 2333 334677788899997654 37776 45 46889999999999999888751 23333222111111112
Q ss_pred CCCCCCCceEecccccc--cchhHHHHHHHHHHHHHc
Q 044575 317 PPSLAPSLSFVGIPRKL--IGFPFFESQAKWIAQLLS 351 (454)
Q Consensus 317 ~~~~~p~l~~iG~~~~~--~~~~~a~~qa~~~a~~i~ 351 (454)
. ++.|++|++||+... .....|..||+.+|.++.
T Consensus 277 ~-t~~~~iya~GD~~~~~~~~~~~A~~~g~~aA~~i~ 312 (335)
T 2a87_A 277 S-TSLPGVFAAGDLVDRTYRQAVTAAGSGCAAAIDAE 312 (335)
T ss_dssp B-CSSTTEEECGGGTCCSCCCHHHHHHHHHHHHHHHH
T ss_pred c-cCCCCEEEeeecCCccHHHHHHHHHhHHHHHHHHH
Confidence 2 356999999999865 245678889999887764
No 22
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=2.5e-34 Score=292.10 Aligned_cols=302 Identities=20% Similarity=0.220 Sum_probs=200.0
Q ss_pred ccCCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCc-c-ccccccceecCCccccccCCCCC
Q 044575 9 CAQSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEV-H-SSVYASLRLTSPREIMGYTDFPF 86 (454)
Q Consensus 9 ~~~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~ 86 (454)
++..+||+||||||||++||..|++.|++|+|||+++.+||+|.+.+|.|++.+ . ...+........ .+.+
T Consensus 22 ~m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~-------~~g~ 94 (491)
T 3urh_A 22 SMMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLE-------ALGV 94 (491)
T ss_dssp ----CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSG-------GGTE
T ss_pred hcccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHh-------hcCc
Confidence 344689999999999999999999999999999999999999999888776511 1 011111111111 1111
Q ss_pred CCCCCCCCCCCCCHHHHHHH-----------HHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCC
Q 044575 87 VLKKGRDVRRFPGHKELWLY-----------LKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKA 155 (454)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~y-----------l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~ 155 (454)
.. .. .......+..+ +....++.++. +..+. +..+ +.. .+.|...+
T Consensus 95 ~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~g~-~~~~---~~~---------~~~v~~~~--- 151 (491)
T 3urh_A 95 EV----AN-PKLNLQKMMAHKDATVKSNVDGVSFLFKKNKID--GFQGT-GKVL---GQG---------KVSVTNEK--- 151 (491)
T ss_dssp EC----CC-CEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCE--EEESE-EEEC---SSS---------EEEEECTT---
T ss_pred cc----CC-CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEEEE-EEEe---cCC---------EEEEEeCC---
Confidence 10 00 01122333322 22333444544 33332 2222 111 45554332
Q ss_pred CeEEEEEeCEEEEccCCCCCCCCCCCCCcCC-ccceeEEeecCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEe
Q 044575 156 DKVVEEVFDAVVVATGHYSYPRLPSIKGMDK-WKRKQMHSHIYRVPEPFRNEVVVVVGNSLSGQDISMELVEVAKEVHLS 234 (454)
Q Consensus 156 ~~~~~~~~d~vViAtG~~~~p~~p~i~G~~~-~~~~~~~~~~~~~~~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~ 234 (454)
+...++.||+|||||| +.| |.+||.+. +.+..+++..........+++|+|||+|.+|+|+|..+++.|.+|+++
T Consensus 152 g~~~~~~~d~lViATG--s~p--~~ipg~~~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv 227 (491)
T 3urh_A 152 GEEQVLEAKNVVIATG--SDV--AGIPGVEVAFDEKTIVSSTGALALEKVPASMIVVGGGVIGLELGSVWARLGAKVTVV 227 (491)
T ss_dssp SCEEEEECSEEEECCC--EEC--CCBTTBCCCCCSSSEECHHHHTSCSSCCSEEEEECCSHHHHHHHHHHHHHTCEEEEE
T ss_pred CceEEEEeCEEEEccC--CCC--CCCCCcccccCCeeEEehhHhhhhhhcCCeEEEECCCHHHHHHHHHHHHcCCEEEEE
Confidence 3345789999999999 665 45678753 334444444433333446799999999999999999999999999999
Q ss_pred cccCCcCccchh--------hhcc-CCCeEEcCceeEEecCC---cEEEeC---C--CEEeeceEEEccCcccCCcCC--
Q 044575 235 AKSLNISEGLSK--------VISK-HNNLHLHPQIDCLREDG---RVTFVD---G--CWVTADTILYCTGYSYSFPFL-- 295 (454)
Q Consensus 235 ~r~~~~~~~~~~--------~l~~-~~~i~~~~~v~~v~~~~---~v~~~d---G--~~i~~D~vI~atG~~~~~~~l-- 295 (454)
++.+.+.+.+.+ .+.+ .++++.+..|+++..++ .+.+.+ | +++++|.||+|||++|+.++|
T Consensus 228 ~~~~~~l~~~d~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~~~~l~l 307 (491)
T 3urh_A 228 EFLDTILGGMDGEVAKQLQRMLTKQGIDFKLGAKVTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIATGRKPSTDGLGL 307 (491)
T ss_dssp CSSSSSSSSSCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTSCCCEEEEESEEEECCCCEECCTTSCH
T ss_pred eccccccccCCHHHHHHHHHHHHhCCCEEEECCeEEEEEEeCCEEEEEEEecCCCceEEEEcCEEEEeeCCccCCCccCc
Confidence 999887554332 2222 34777888888886433 356653 5 478899999999999999874
Q ss_pred -------CCCCceeeCCCCcccccCcccCCCCCCCceEeccccccc-chhHHHHHHHHHHHHHcCCC
Q 044575 296 -------DTKGIVVVDDDRVGPLYEHTFPPSLAPSLSFVGIPRKLI-GFPFFESQAKWIAQLLSGKR 354 (454)
Q Consensus 296 -------~~~g~i~v~~~~~~~~~~~~~~~~~~p~l~~iG~~~~~~-~~~~a~~qa~~~a~~i~g~~ 354 (454)
+++|.+.+|+..+ ++.|++|++||+...+ ..+.|..||+.+|+++.|+.
T Consensus 308 ~~~g~~~~~~G~i~vd~~~~----------t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g~~ 364 (491)
T 3urh_A 308 AKAGVVLDSRGRVEIDRHFQ----------TSIAGVYAIGDVVRGPMLAHKAEDEGVAVAEIIAGQA 364 (491)
T ss_dssp HHHTCCBCTTSCBCCCTTCB----------CSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHTTSC
T ss_pred hhcCceECCCCCEeECCCCC----------CCCCCEEEEEecCCCccchhHHHHHHHHHHHHHcCCC
Confidence 2456677766554 4579999999998544 45899999999999999864
No 23
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=100.00 E-value=1.4e-33 Score=270.06 Aligned_cols=290 Identities=18% Similarity=0.197 Sum_probs=193.0
Q ss_pred ccCCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCC
Q 044575 9 CAQSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVL 88 (454)
Q Consensus 9 ~~~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (454)
|+..+||+||||||||++||..|++.|++|+|||+. ..||.+.+ +|.+++ .+. ..+..
T Consensus 1 M~~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~-~~gg~~~~-G~~~~~--------~~i-------~~~~g----- 58 (314)
T 4a5l_A 1 MSNIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGF-MAGGVAAG-GQLTTT--------TII-------ENFPG----- 58 (314)
T ss_dssp -CCCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCS-SGGGCCTT-CGGGGS--------SEE-------CCSTT-----
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecC-CCCCcccC-CCcCCh--------HHh-------hhccC-----
Confidence 344589999999999999999999999999999986 46666654 332221 000 11111
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEE
Q 044575 89 KKGRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVV 168 (454)
Q Consensus 89 ~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVi 168 (454)
.+...+..++.+++.+.+++++.. +. ...|..+..... .+.+.+.++. ++.||+|||
T Consensus 59 -----~~~~i~~~~l~~~~~~~~~~~~~~--~~-~~~v~~~~~~~~----------~~~~~~~~~~-----~~~~~~lii 115 (314)
T 4a5l_A 59 -----FPNGIDGNELMMNMRTQSEKYGTT--II-TETIDHVDFSTQ----------PFKLFTEEGK-----EVLTKSVII 115 (314)
T ss_dssp -----CTTCEEHHHHHHHHHHHHHHTTCE--EE-CCCEEEEECSSS----------SEEEEETTCC-----EEEEEEEEE
T ss_pred -----CcccCCHHHHHHHHHHHHhhcCcE--EE-EeEEEEeecCCC----------ceEEEECCCe-----EEEEeEEEE
Confidence 122345688899999999988875 43 344555544432 4555555443 789999999
Q ss_pred ccCCCCCCCCCCCCCcCCccceeEEeecCCCC--CCCCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCcCccch-
Q 044575 169 ATGHYSYPRLPSIKGMDKWKRKQMHSHIYRVP--EPFRNEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNISEGLS- 245 (454)
Q Consensus 169 AtG~~~~p~~p~i~G~~~~~~~~~~~~~~~~~--~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~~~~~~- 245 (454)
||| +.|+.|++||.+.+.+...+...+... ..+++++|+|||+|.+|+|+|..+++.|++||+++|.+.......
T Consensus 116 ATG--~~~~~~~ipG~~~~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~~~~~~~ 193 (314)
T 4a5l_A 116 ATG--ATAKRMHVPGEDKYWQNGVSACAICDGAVPIFRNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFRASKTM 193 (314)
T ss_dssp CCC--EEECCCCCTTHHHHBTTTEESCHHHHTTSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCSCHHH
T ss_pred ccc--ccccccCCCccccccccceeeehhhhhhhhhcCCCeEEEECCChHHHHHHHHHHHhCCeeeeecccccccccchh
Confidence 999 899999999988766555665544322 235789999999999999999999999999999999876532211
Q ss_pred -hhhcc--CCCeEEcCceeEEecCC----cEEEe-----CCCEEeeceEEEccCcccCCcCCCCCCceeeCCCCcccccC
Q 044575 246 -KVISK--HNNLHLHPQIDCLREDG----RVTFV-----DGCWVTADTILYCTGYSYSFPFLDTKGIVVVDDDRVGPLYE 313 (454)
Q Consensus 246 -~~l~~--~~~i~~~~~v~~v~~~~----~v~~~-----dG~~i~~D~vI~atG~~~~~~~l~~~g~i~v~~~~~~~~~~ 313 (454)
..... ....+....+.++.... .+.+. +++++++|.|++|+|++|+++++... +..+++... . .
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~d~vi~a~G~~pn~~~l~~~--~~~~~~G~i-v-~ 269 (314)
T 4a5l_A 194 QERVLNHPKIEVIWNSELVELEGDGDLLNGAKIHNLVSGEYKVVPVAGLFYAIGHSPNSKFLGGQ--VKTADDGYI-L-T 269 (314)
T ss_dssp HHHHHTCTTEEEECSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGTTS--SCBCTTSCB-C-C
T ss_pred hhhhhcccceeeEeeeeeEEEEeeeeccceeEEeecccccceeeccccceEecccccChhHhccc--ceEcCCeeE-e-C
Confidence 11111 11233333344443221 23332 35678999999999999999987532 222322221 0 0
Q ss_pred cccCCCCCCCceEeccccccc--chhHHHHHHHHHHHHH
Q 044575 314 HTFPPSLAPSLSFVGIPRKLI--GFPFFESQAKWIAQLL 350 (454)
Q Consensus 314 ~~~~~~~~p~l~~iG~~~~~~--~~~~a~~qa~~~a~~i 350 (454)
.-+. |+.|++|++||+...+ ....|..|++.+|..+
T Consensus 270 ~~~~-Ts~pgIyA~GDv~~~~~~~~~~A~~~G~~AA~~~ 307 (314)
T 4a5l_A 270 EGPK-TSVDGVFACGDVCDRVYRQAIVAAGSGCMAALSC 307 (314)
T ss_dssp BTTB-CSSTTEEECSTTTCSSCCCHHHHHHHHHHHHHHH
T ss_pred CCCc-cCCCCEEEEEeccCCcchHHHHHHHHHHHHHHHH
Confidence 1112 5689999999998654 3456777888777543
No 24
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=100.00 E-value=1.8e-34 Score=292.77 Aligned_cols=299 Identities=20% Similarity=0.224 Sum_probs=206.5
Q ss_pred ccCCCcEEEECcChHHHHHHHHHHH-cCCcEEEEe--------eCCCCCcccccCCCCCCCCcc-cc-ccccceecCCcc
Q 044575 9 CAQSKNVCVIGAGPSGLVAARELRK-EGHRVVVLE--------QNHDVGGQWLYDPNTDQTEVH-SS-VYASLRLTSPRE 77 (454)
Q Consensus 9 ~~~~~~VvIIGaG~aGl~aA~~l~~-~g~~v~vie--------~~~~~GG~w~~~~~~~~~~~~-~~-~~~~~~~~~~~~ 77 (454)
|...+||+|||||+||+++|..|++ .|++|+||| +++.+||+|.+.+|.|++.+. +. .+..+.
T Consensus 4 M~~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l~~~a~~~~~~~------ 77 (495)
T 2wpf_A 4 MSKAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLR------ 77 (495)
T ss_dssp CCEEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHHHHHHHHHHHHH------
T ss_pred cccccCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCeeecCCcchHHHHHHHHHHHHHHh------
Confidence 4446899999999999999999999 999999999 357899999998887765111 00 001110
Q ss_pred ccccCCCCCCCCCCCCCC-CCCCHHHHHHHHHHHHH-----------Hh-CCCccEEeCeEEEEEEEcCCCccccCCcCC
Q 044575 78 IMGYTDFPFVLKKGRDVR-RFPGHKELWLYLKDFCQ-----------RF-GLREMIRFNTRVEYVGMLDCGELIIGNDLI 144 (454)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~yl~~~~~-----------~~-~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~ 144 (454)
.+..+.+.. ... ......++.++.+++.+ +. ++. +..+ ++..++
T Consensus 78 --~~~~~g~~~----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~--~~~g-~~~~i~-------------- 134 (495)
T 2wpf_A 78 --ESAGFGWEF----DGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLD--FFLG-WGSLES-------------- 134 (495)
T ss_dssp --HHHTTTEEC----CGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTTEE--EEES-EEEEEE--------------
T ss_pred --HHHhcCccc----CCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeE--EEEe-EEEEee--------------
Confidence 111121111 000 01234555555544433 33 443 4444 354443
Q ss_pred cEEEEEeecCC---CeEEEEEeCEEEEccCCCCCCCCCCCCCcCCccceeEEeecCCCCCCCCCCeEEEEcCCCCHHHHH
Q 044575 145 KWVVKSKEKKA---DKVVEEVFDAVVVATGHYSYPRLPSIKGMDKWKRKQMHSHIYRVPEPFRNEVVVVVGNSLSGQDIS 221 (454)
Q Consensus 145 ~~~v~~~~~~~---~~~~~~~~d~vViAtG~~~~p~~p~i~G~~~~~~~~~~~~~~~~~~~~~~k~vvVVG~G~sg~e~A 221 (454)
.++|++.+..+ ....++.||+|||||| +.|..|++||.+. .+++.++..... .+++++|||+|.+|+|+|
T Consensus 135 ~~~v~v~~~~~~~~~~~~~~~~d~lViATG--s~p~~p~i~G~~~----~~~~~~~~~~~~-~~~~vvViGgG~ig~E~A 207 (495)
T 2wpf_A 135 KNVVVVRETADPKSAVKERLQADHILLATG--SWPQMPAIPGIEH----CISSNEAFYLPE-PPRRVLTVGGGFISVEFA 207 (495)
T ss_dssp TTEEEEESSSSTTSCEEEEEEEEEEEECCC--EEECCCCCTTGGG----CEEHHHHTTCSS-CCSEEEEECSSHHHHHHH
T ss_pred CCEEEEeecCCccCCCCeEEEcCEEEEeCC--CCcCCCCCCCccc----cccHHHHHhhhh-cCCeEEEECCCHHHHHHH
Confidence 34566652111 0023789999999999 8999999998742 445544433322 468999999999999999
Q ss_pred HHHhhh---cCeEEEecccCCcCccchh--------hhc-cCCCeEEcCceeEEecC--C--cEEEeCCCEEeeceEEEc
Q 044575 222 MELVEV---AKEVHLSAKSLNISEGLSK--------VIS-KHNNLHLHPQIDCLRED--G--RVTFVDGCWVTADTILYC 285 (454)
Q Consensus 222 ~~l~~~---~~~V~l~~r~~~~~~~~~~--------~l~-~~~~i~~~~~v~~v~~~--~--~v~~~dG~~i~~D~vI~a 285 (454)
..|++. |.+|+++++.+.+.+.+++ .+. ..++++.+..|+++..+ + .|++.+|+++++|.||+|
T Consensus 208 ~~l~~~~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a 287 (495)
T 2wpf_A 208 GIFNAYKPPGGKVTLCYRNNLILRGFDETIREEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMA 287 (495)
T ss_dssp HHHHHHCCTTCEEEEEESSSSSCTTSCHHHHHHHHHHHHHTTCEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEEC
T ss_pred HHHHhhCCCCCeEEEEEcCCccccccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEEC
Confidence 999999 9999999999887554432 222 23578889999999754 2 477889999999999999
Q ss_pred cCcccCCcCC--C-------CCCceeeCCCCcccccCcccCCCCCCCceEeccccccc-chhHHHHHHHHHHHHHcCC
Q 044575 286 TGYSYSFPFL--D-------TKGIVVVDDDRVGPLYEHTFPPSLAPSLSFVGIPRKLI-GFPFFESQAKWIAQLLSGK 353 (454)
Q Consensus 286 tG~~~~~~~l--~-------~~g~i~v~~~~~~~~~~~~~~~~~~p~l~~iG~~~~~~-~~~~a~~qa~~~a~~i~g~ 353 (454)
+|++|++++| . ++|.|.+|++.+ ++.|++|++||+...+ ..+.|..||+.+|.++.|.
T Consensus 288 ~G~~p~~~~L~l~~~gl~~~~~G~i~Vd~~~~----------t~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~g~ 355 (495)
T 2wpf_A 288 IGRIPRTNDLQLGNVGVKLTPKGGVQVDEFSR----------TNVPNIYAIGDITDRLMLTPVAINEGAALVDTVFGN 355 (495)
T ss_dssp SCEEECCGGGTGGGTTCCBCTTSSBCCCTTCB----------CSSTTEEECGGGGCSCCCHHHHHHHHHHHHHHHHSS
T ss_pred CCCcccccccchhhcCccCCCCCCEEECCCCc----------cCCCCEEEEeccCCCccCHHHHHHHHHHHHHHhcCC
Confidence 9999998754 2 234555555443 4579999999998643 4589999999999999885
No 25
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=100.00 E-value=1.5e-34 Score=291.67 Aligned_cols=289 Identities=17% Similarity=0.169 Sum_probs=200.1
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCc-ccc-ccccceecCCccccccCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEV-HSS-VYASLRLTSPREIMGYTDFPFVLK 89 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 89 (454)
.+||+|||||+||+++|..|++.|.+|+|||+++.+||+|.+.+|.|++.+ ... .+..+. +.+ ..
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~-~~~-------~~----- 70 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLT-NIA-------NV----- 70 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHH-HHH-------CS-----
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHH-hcc-------cC-----
Confidence 489999999999999999999999999999999999999999888765411 000 011100 000 00
Q ss_pred CCCCCCCCCCHHHHHHHHHH------------HHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCe
Q 044575 90 KGRDVRRFPGHKELWLYLKD------------FCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADK 157 (454)
Q Consensus 90 ~~~~~~~~~~~~~~~~yl~~------------~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 157 (454)
........+..+... ..++.++. +. ..++..++.. .+.|...++.
T Consensus 71 -----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~--~~-~g~v~~id~~------------~~~V~~~~g~--- 127 (466)
T 3l8k_A 71 -----KIPLDFSTVQDRKDYVQELRFKQHKRNMSQYETLT--FY-KGYVKIKDPT------------HVIVKTDEGK--- 127 (466)
T ss_dssp -----CCCCCHHHHHHHHHHHHHHHHHHHHHHHTTCTTEE--EE-SEEEEEEETT------------EEEEEETTSC---
T ss_pred -----CCCcCHHHHHHHHHhheeccccchHHHHHHhCCCE--EE-EeEEEEecCC------------eEEEEcCCCc---
Confidence 011222333332222 22222332 22 3366666532 6777665443
Q ss_pred EEEEEeCEEEEccCCCCCCCCCCCCCcCCccceeEEeecCC---CCCCCCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEe
Q 044575 158 VVEEVFDAVVVATGHYSYPRLPSIKGMDKWKRKQMHSHIYR---VPEPFRNEVVVVVGNSLSGQDISMELVEVAKEVHLS 234 (454)
Q Consensus 158 ~~~~~~d~vViAtG~~~~p~~p~i~G~~~~~~~~~~~~~~~---~~~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~ 234 (454)
..++.||+|||||| +.|..|++||.+. ..++..+. ......+++|+|||+|.+|+|+|..+++.|.+|+++
T Consensus 128 ~~~~~~d~lviAtG--~~p~~p~i~G~~~----~~t~~~~~~~~~~l~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv 201 (466)
T 3l8k_A 128 EIEAETRYMIIASG--AETAKLRLPGVEY----CLTSDDIFGYKTSFRKLPQDMVIIGAGYIGLEIASIFRLMGVQTHII 201 (466)
T ss_dssp EEEEEEEEEEECCC--EEECCCCCTTGGG----SBCHHHHHSTTCSCCSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEecCEEEECCC--CCccCCCCCCccc----eEeHHHHHHHHHHHhhCCCeEEEECCCHHHHHHHHHHHHcCCEEEEE
Confidence 22389999999999 8999999999862 33333322 111224689999999999999999999999999999
Q ss_pred cccCCcCccc-hh----hhccC--CCeEEcCceeEEecC---C-cEEEe--CCC--EEeeceEEEccCcccCCcC-CC--
Q 044575 235 AKSLNISEGL-SK----VISKH--NNLHLHPQIDCLRED---G-RVTFV--DGC--WVTADTILYCTGYSYSFPF-LD-- 296 (454)
Q Consensus 235 ~r~~~~~~~~-~~----~l~~~--~~i~~~~~v~~v~~~---~-~v~~~--dG~--~i~~D~vI~atG~~~~~~~-l~-- 296 (454)
.+.+++.+.+ .+ .+.+. ++++.+..|+++..+ + .|.+. +|+ ++++|.||+|+|++|+.++ +.
T Consensus 202 ~~~~~~l~~~~d~~~~~~l~~~l~v~i~~~~~v~~i~~~~~~~v~v~~~~~~G~~~~i~~D~vi~a~G~~p~~~l~l~~~ 281 (466)
T 3l8k_A 202 EMLDRALITLEDQDIVNTLLSILKLNIKFNSPVTEVKKIKDDEYEVIYSTKDGSKKSIFTNSVVLAAGRRPVIPEGAREI 281 (466)
T ss_dssp CSSSSSCTTSCCHHHHHHHHHHHCCCEECSCCEEEEEEEETTEEEEEECCTTSCCEEEEESCEEECCCEEECCCTTTGGG
T ss_pred EeCCcCCCCCCCHHHHHHHHhcCEEEEEECCEEEEEEEcCCCcEEEEEEecCCceEEEEcCEEEECcCCCcccccchhhc
Confidence 9998875544 32 22221 678888899988752 2 35666 676 7889999999999999883 22
Q ss_pred -----CCCceeeCCCCcccccCcccCCCCCCCceEecccccc-cchhHHHHHHHHHHHHHcCC
Q 044575 297 -----TKGIVVVDDDRVGPLYEHTFPPSLAPSLSFVGIPRKL-IGFPFFESQAKWIAQLLSGK 353 (454)
Q Consensus 297 -----~~g~i~v~~~~~~~~~~~~~~~~~~p~l~~iG~~~~~-~~~~~a~~qa~~~a~~i~g~ 353 (454)
++| +.+|+..+ ++.|++|++||+... ...+.|..||+.+|.++.|.
T Consensus 282 gl~~~~~G-i~vd~~~~----------t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 333 (466)
T 3l8k_A 282 GLSISKTG-IVVDETMK----------TNIPNVFATGDANGLAPYYHAAVRMSIAAANNIMAN 333 (466)
T ss_dssp TCCBCSSS-BCCCTTCB----------CSSTTEEECGGGTCSCCSHHHHHHHHHHHHHHHHTT
T ss_pred CceeCCCC-EeECCCcc----------CCCCCEEEEEecCCCCccHhHHHHHHHHHHHHHhCC
Confidence 344 55555443 457999999999975 44579999999999999875
No 26
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=100.00 E-value=6.5e-34 Score=284.24 Aligned_cols=282 Identities=17% Similarity=0.195 Sum_probs=199.9
Q ss_pred CcEEEECcChHHHHHHHHHHHcC--CcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCC
Q 044575 13 KNVCVIGAGPSGLVAARELRKEG--HRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKK 90 (454)
Q Consensus 13 ~~VvIIGaG~aGl~aA~~l~~~g--~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (454)
++|+||||||||++||..|++.| .+|+|||+++..++... + .|... .......
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~---~-----------------l~~~~---~~~~~~~-- 55 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANC---A-----------------LPYVI---GEVVEDR-- 55 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBCGG---G-----------------HHHHH---TTSSCCG--
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCcc---h-----------------hHHHH---cCCccch--
Confidence 37999999999999999999987 57999999876532110 0 00000 0000000
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEcc
Q 044575 91 GRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVAT 170 (454)
Q Consensus 91 ~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAt 170 (454)
....... ...+.+++++. ++.+++|+.|+.. ...+.+.....+...++.||+|||||
T Consensus 56 --~~~~~~~-------~~~~~~~~~i~--~~~~~~V~~id~~------------~~~~~~~~~~~~~~~~~~yd~lVIAT 112 (437)
T 4eqs_A 56 --RYALAYT-------PEKFYDRKQIT--VKTYHEVIAINDE------------RQTVSVLNRKTNEQFEESYDKLILSP 112 (437)
T ss_dssp --GGTBCCC-------HHHHHHHHCCE--EEETEEEEEEETT------------TTEEEEEETTTTEEEEEECSEEEECC
T ss_pred --hhhhhcC-------HHHHHHhcCCE--EEeCCeEEEEEcc------------CcEEEEEeccCCceEEEEcCEEEECC
Confidence 0000011 12345667877 7889999999865 33455555554566688999999999
Q ss_pred CCCCCCCCCCCCCcCCccceeEEeecCCCC--CCCCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCcCccchhhh
Q 044575 171 GHYSYPRLPSIKGMDKWKRKQMHSHIYRVP--EPFRNEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNISEGLSKVI 248 (454)
Q Consensus 171 G~~~~p~~p~i~G~~~~~~~~~~~~~~~~~--~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~~~~~~~~l 248 (454)
| +.|+.|++||...+....+........ ...++++++|||+|.+|+|+|..+++.+.+||++++.+++.+.+++.+
T Consensus 113 G--s~p~~p~i~g~~~~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~~d~~~ 190 (437)
T 4eqs_A 113 G--ASANSLGFESDITFTLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLMDADM 190 (437)
T ss_dssp C--EEECCCCCCCTTEECCSSHHHHHHHHHHHHHHTCCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTTSCGGG
T ss_pred C--CccccccccCceEEeeccHHHHHHHHHhhhccCCcEEEEECCccchhhhHHHHHhcCCcceeeeeeccccccccchh
Confidence 9 899999888865443322211110000 012358999999999999999999999999999999998855443322
Q ss_pred --------c-cCCCeEEcCceeEEecCCcEEEeCCCEEeeceEEEccCcccCCcCCC-------CCCceeeCCCCccccc
Q 044575 249 --------S-KHNNLHLHPQIDCLREDGRVTFVDGCWVTADTILYCTGYSYSFPFLD-------TKGIVVVDDDRVGPLY 312 (454)
Q Consensus 249 --------~-~~~~i~~~~~v~~v~~~~~v~~~dG~~i~~D~vI~atG~~~~~~~l~-------~~g~i~v~~~~~~~~~ 312 (454)
. +.++++.+..|++++.+ .+++++|+++++|.||+|+|++||++++. ++|.|.+|++.+
T Consensus 191 ~~~~~~~l~~~gV~i~~~~~v~~~~~~-~v~~~~g~~~~~D~vl~a~G~~Pn~~~~~~~gl~~~~~G~I~vd~~~~---- 265 (437)
T 4eqs_A 191 NQPILDELDKREIPYRLNEEINAINGN-EITFKSGKVEHYDMIIEGVGTHPNSKFIESSNIKLDRKGFIPVNDKFE---- 265 (437)
T ss_dssp GHHHHHHHHHTTCCEEESCCEEEEETT-EEEETTSCEEECSEEEECCCEEESCGGGTTSSCCCCTTSCEECCTTCB----
T ss_pred HHHHHHHhhccceEEEeccEEEEecCC-eeeecCCeEEeeeeEEEEeceecCcHHHHhhhhhhccCCcEecCCCcc----
Confidence 2 23589999999999765 59999999999999999999999988764 345666666554
Q ss_pred CcccCCCCCCCceEeccccccc-----------chhHHHHHHHHHHHHHcCCCC
Q 044575 313 EHTFPPSLAPSLSFVGIPRKLI-----------GFPFFESQAKWIAQLLSGKRT 355 (454)
Q Consensus 313 ~~~~~~~~~p~l~~iG~~~~~~-----------~~~~a~~qa~~~a~~i~g~~~ 355 (454)
++.|++|++||+...+ ..+.|..||+.+|++|.|...
T Consensus 266 ------Ts~p~IyA~GDva~~~~~~~~~~~~~~~a~~A~~~g~~~a~ni~g~~~ 313 (437)
T 4eqs_A 266 ------TNVPNIYAIGDIATSHYRHVDLPASVPLAWGAHRAASIVAEQIAGNDT 313 (437)
T ss_dssp ------CSSTTEEECGGGEEEEBSSSSSEECCCSHHHHHHHHHHHHHHHHSCTT
T ss_pred ------CCCCCEEEEEEccCcccccCCccccchhHHHHHHHHHHHHHHHcCCCC
Confidence 5679999999997432 346889999999999999754
No 27
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=100.00 E-value=3.7e-33 Score=269.39 Aligned_cols=285 Identities=18% Similarity=0.207 Sum_probs=204.0
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCCcEEEEee----CCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQ----NHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPF 86 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~----~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (454)
..+||+|||||++|+++|..|++.|++|+|||+ ...+||.|..... ...++.+
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~---------------------~~~~~~~-- 63 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTTD---------------------VENFPGF-- 63 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGCSE---------------------ECCSTTC--
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeeeccc---------------------cccCCCC--
Confidence 357999999999999999999999999999999 5667887764311 0001111
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEE
Q 044575 87 VLKKGRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAV 166 (454)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~v 166 (454)
+......++.+++.++++++++. +++++ |.+++...+ .|+|++ ++. ++.||+|
T Consensus 64 --------~~~~~~~~~~~~l~~~~~~~gv~--~~~~~-v~~i~~~~~----------~~~v~~-~~~-----~~~~~~v 116 (333)
T 1vdc_A 64 --------PEGILGVELTDKFRKQSERFGTT--IFTET-VTKVDFSSK----------PFKLFT-DSK-----AILADAV 116 (333)
T ss_dssp --------TTCEEHHHHHHHHHHHHHHTTCE--EECCC-CCEEECSSS----------SEEEEC-SSE-----EEEEEEE
T ss_pred --------ccCCCHHHHHHHHHHHHHHCCCE--EEEeE-EEEEEEcCC----------EEEEEE-CCc-----EEEcCEE
Confidence 11134578899999999988877 77775 888876432 688876 332 6899999
Q ss_pred EEccCCCCCCCCCCCCCcCC----ccceeEEeecCCCCCC--CCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCc
Q 044575 167 VVATGHYSYPRLPSIKGMDK----WKRKQMHSHIYRVPEP--FRNEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNI 240 (454)
Q Consensus 167 ViAtG~~~~p~~p~i~G~~~----~~~~~~~~~~~~~~~~--~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~ 240 (454)
|+||| +.|..|++||.+. +.+..+|+..+..... ..+++|+|||+|.+|+|+|..|++.+.+|++++|++.+
T Consensus 117 v~A~G--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~ 194 (333)
T 1vdc_A 117 ILAIG--AVAKRLSFVGSGEVLGGFWNRGISACAVCDGAAPIFRNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAF 194 (333)
T ss_dssp EECCC--EEECCCCCBTCSSSSSCCBTTTEESCHHHHTTSGGGTTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred EECCC--CCcCCCCCCCccccccccccCcEEEeccCccchhhcCCCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcC
Confidence 99999 7788898999876 5555566554322222 56899999999999999999999999999999998876
Q ss_pred C--ccch-hhhcc-CCCeEEcCceeEEecCC------cEEEe---CC--CEEeeceEEEccCcccCCcCCCCCCceeeCC
Q 044575 241 S--EGLS-KVISK-HNNLHLHPQIDCLREDG------RVTFV---DG--CWVTADTILYCTGYSYSFPFLDTKGIVVVDD 305 (454)
Q Consensus 241 ~--~~~~-~~l~~-~~~i~~~~~v~~v~~~~------~v~~~---dG--~~i~~D~vI~atG~~~~~~~l~~~g~i~v~~ 305 (454)
. +.+. +.+.+ .++++.+..|+++..++ .|.+. +| +++++|.||+|+|++|+.++++. + +.+++
T Consensus 195 ~~~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~~-~-l~~~~ 272 (333)
T 1vdc_A 195 RASKIMQQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHEPATKFLDG-G-VELDS 272 (333)
T ss_dssp CSCHHHHHHHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGTT-S-SCBCT
T ss_pred CccHHHHHHHHhCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEEEEEeCCccchHHhhc-c-ccccC
Confidence 3 2232 23332 34677788899987554 27776 45 46889999999999999888752 1 23332
Q ss_pred CCcccccCcccCCCCCCCceEecccccc--cchhHHHHHHHHHHHHH
Q 044575 306 DRVGPLYEHTFPPSLAPSLSFVGIPRKL--IGFPFFESQAKWIAQLL 350 (454)
Q Consensus 306 ~~~~~~~~~~~~~~~~p~l~~iG~~~~~--~~~~~a~~qa~~~a~~i 350 (454)
.......++... ++.|++|++||+... .....|..||+.+|.++
T Consensus 273 ~G~i~vd~~~~~-t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i 318 (333)
T 1vdc_A 273 DGYVVTKPGTTQ-TSVPGVFAAGDVQDKKYRQAITAAGTGCMAALDA 318 (333)
T ss_dssp TSCBCCCTTSCB-CSSTTEEECGGGGCSSCCCHHHHHHHHHHHHHHH
T ss_pred CCCEEechhhcc-cCCCCEEEeeeccCCCchhHHHHHHhHHHHHHHH
Confidence 221111111122 356999999999865 34567888888887655
No 28
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=100.00 E-value=6e-36 Score=303.25 Aligned_cols=356 Identities=16% Similarity=0.173 Sum_probs=224.6
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKK 90 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (454)
++++|||||||+||+++|+.|++.+++|+|||++++. .|..+........+..
T Consensus 41 ~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~~------------------~~~PlL~~va~G~l~~--------- 93 (502)
T 4g6h_A 41 DKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYF------------------LFTPLLPSAPVGTVDE--------- 93 (502)
T ss_dssp SSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSEE------------------ECGGGGGGTTTTSSCG---------
T ss_pred CCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCCc------------------ccccchhHHhhccccH---------
Confidence 4578999999999999999999999999999998642 2222222221111111
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCccE-EeCeEEEEEEEcCCCccccCCcCCcEEEEEeecC---------------
Q 044575 91 GRDVRRFPGHKELWLYLKDFCQRFGLREMI-RFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKK--------------- 154 (454)
Q Consensus 91 ~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i-~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~--------------- 154 (454)
+++...+.++.... ...+ ....+|++|+.. ..+|++.+..
T Consensus 94 ----------~~i~~p~~~~~~~~--~~~v~~~~~~v~~ID~~------------~k~V~l~~~~~~~~~~~~~~~~~~~ 149 (502)
T 4g6h_A 94 ----------KSIIEPIVNFALKK--KGNVTYYEAEATSINPD------------RNTVTIKSLSAVSQLYQPENHLGLH 149 (502)
T ss_dssp ----------GGGEEEHHHHHTTC--SSCEEEEEEEEEEEEGG------------GTEEEEEEEEEEEECSSSCCCCCCC
T ss_pred ----------HHhhhhHHHHHHhh--cCCeEEEEEEEEEEEhh------------hCEEEEeecccceeecccccccccc
Confidence 11111122222111 1112 335688888876 3345443210
Q ss_pred CCeEEEEEeCEEEEccCCCCCCCCCCCCCcCCccce---eEEeecC--------------C--CCCCCCCCeEEEEcCCC
Q 044575 155 ADKVVEEVFDAVVVATGHYSYPRLPSIKGMDKWKRK---QMHSHIY--------------R--VPEPFRNEVVVVVGNSL 215 (454)
Q Consensus 155 ~~~~~~~~~d~vViAtG~~~~p~~p~i~G~~~~~~~---~~~~~~~--------------~--~~~~~~~k~vvVVG~G~ 215 (454)
.....++.||+|||||| +.|+.|.+||+++..-. .-++... . .++.....+++|||||+
T Consensus 150 ~~~~~~i~YD~LViAtG--s~~~~~~ipG~~e~a~~l~t~~dA~~ir~~l~~~~e~a~~~~~~~~~~~~~~~vvVvGgG~ 227 (502)
T 4g6h_A 150 QAEPAEIKYDYLISAVG--AEPNTFGIPGVTDYGHFLKEIPNSLEIRRTFAANLEKANLLPKGDPERRRLLSIVVVGGGP 227 (502)
T ss_dssp TTCCEEEECSEEEECCC--CEECCTTCTTHHHHCEECSSHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHTEEEEECCSH
T ss_pred cCCceEEeCCEEEEcCC--cccccCCccCcccccCCCCCHHHHHHHHHHHHHHHHHHhcccccchhhccccceEEECCCc
Confidence 12234789999999999 89999999997642100 0000000 0 00001225899999999
Q ss_pred CHHHHHHHHhhhc--------------CeEEEecccCCcCccchhhhc--------c-CCCeEEcCceeEEecCCcEEE-
Q 044575 216 SGQDISMELVEVA--------------KEVHLSAKSLNISEGLSKVIS--------K-HNNLHLHPQIDCLREDGRVTF- 271 (454)
Q Consensus 216 sg~e~A~~l~~~~--------------~~V~l~~r~~~~~~~~~~~l~--------~-~~~i~~~~~v~~v~~~~~v~~- 271 (454)
+|+|+|.+|++.+ .+|+++++.+++.+.+.+.+. + .++++++..|+++++++ +.+
T Consensus 228 tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~v~~v~~~~-~~~~ 306 (502)
T 4g6h_A 228 TGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNMFEKKLSSYAQSHLENTSIKVHLRTAVAKVEEKQ-LLAK 306 (502)
T ss_dssp HHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEETTEEEEEECSSE-EEEE
T ss_pred chhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccccCCCHHHHHHHHHHHHhcceeeecCceEEEEeCCc-eEEE
Confidence 9999999998653 579999999998776654432 2 35788899999997765 433
Q ss_pred ---eCCC----EEeeceEEEccCcccCC---cC-------CCCCCceeeCCCCcccccCcccCCCCCCCceEecccccc-
Q 044575 272 ---VDGC----WVTADTILYCTGYSYSF---PF-------LDTKGIVVVDDDRVGPLYEHTFPPSLAPSLSFVGIPRKL- 333 (454)
Q Consensus 272 ---~dG~----~i~~D~vI~atG~~~~~---~~-------l~~~g~i~v~~~~~~~~~~~~~~~~~~p~l~~iG~~~~~- 333 (454)
.||+ ++++|+||||+|.+|+. .+ .+.+|.|.||++++. .++|++|++||+...
T Consensus 307 ~~~~dg~~~~~~i~ad~viwa~Gv~~~~~~~~l~~~~~~~~~~~g~I~Vd~~lq~---------~~~~~IfAiGD~a~~~ 377 (502)
T 4g6h_A 307 TKHEDGKITEETIPYGTLIWATGNKARPVITDLFKKIPEQNSSKRGLAVNDFLQV---------KGSNNIFAIGDNAFAG 377 (502)
T ss_dssp EECTTSCEEEEEEECSEEEECCCEECCHHHHHHHHHSGGGTTCCSSEEBCTTSBB---------TTCSSEEECGGGEESS
T ss_pred EEecCcccceeeeccCEEEEccCCcCCHHHHhHHHhccccccCCCceeECCcccc---------CCCCCEEEEEcccCCC
Confidence 3554 58899999999999982 11 235678999987763 246899999998753
Q ss_pred --cchhHHHHHHHHHHHHHcCCCCCCCHHHHHHH----HHHHHhhhhhcCCCCCc---------ccccc-----------
Q 044575 334 --IGFPFFESQAKWIAQLLSGKRTLPSWDQMMQS----VKEFYHSRDVAGIPKHN---------THDIA----------- 387 (454)
Q Consensus 334 --~~~~~a~~qa~~~a~~i~g~~~lp~~~~~~~~----~~~~~~~~~~~~~~~~~---------~~~~~----------- 387 (454)
++.+.|..||+++|++|.+..+.|..+..... +...........+..+. ...+.
T Consensus 378 ~p~~a~~A~qqg~~~A~ni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~y~~~G~~a~lG~~~av~~~~~~~~~~~~ 457 (502)
T 4g6h_A 378 LPPTAQVAHQEAEYLAKNFDKMAQIPNFQKNLSSRKDKIDLLFEENNFKPFKYNDLGALAYLGSERAIATIRSGKRTFYT 457 (502)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHTTSSSCCHHHHHHHTTCCCCCCCCCEEEEECSTTCEEEEEEETTEEEEE
T ss_pred CCCchHHHHHHHHHHHHHHHHHhccchhhhhhhhccchhhhhhcCCCCCCCEecCcceEEEEeCCceEEEccCCCcccee
Confidence 34579999999999999765443322111000 00000000001111000 00010
Q ss_pred cHHHHHHHHH-HcCCCCchHHHHHHHHHHhhCCccccccccCCCC
Q 044575 388 NFEYCDRYAD-QIGFPHLEEWRKGLCISALVNSDANLETYRDSWD 431 (454)
Q Consensus 388 ~~~y~~~l~~-~~g~~~~~~~~~~l~~~~~~~~~~~~~~~r~~~~ 431 (454)
..++.+|++| .+++..+++||+++. ++++|.++.++.||.-.
T Consensus 458 ~~G~~a~~~w~~~yl~~l~~~r~r~~--v~~~W~~~~~fgRdisr 500 (502)
T 4g6h_A 458 GGGLMTFYLWRILYLSMILSARSRLK--VFFDWIKLAFFKRDFFK 500 (502)
T ss_dssp EEEHHHHHHHHHHHHHHCSCHHHHHH--HHHHHHHHHHSCCCCCT
T ss_pred cccHHHHHHHHHHHHHHccchhhhHH--HHHHHHHHHhCCCCCcC
Confidence 1279999999 567777778999999 99999999999998744
No 29
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=100.00 E-value=4e-34 Score=288.14 Aligned_cols=290 Identities=19% Similarity=0.252 Sum_probs=200.1
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCc-cccc-cccceecCCccccccCCCCCCC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEV-HSSV-YASLRLTSPREIMGYTDFPFVL 88 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~ 88 (454)
+.+||+|||||++|+++|..|++.|.+|+|||++ .+||+|.+.+|.|++.+ .+.. +..++ +.+ .+.+..
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~gciP~k~l~~~a~~~~~~~-~~~-------~~g~~~ 73 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESK-ALGGTCVNVGCVPKKVMWYASHLAEAVR-DAP-------GFGVQA 73 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHH-HGG-------GGTBCC
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCC-CCCCcCcCcCchhHHHHHHHHHHHHHHh-hhh-------hcCccc
Confidence 4589999999999999999999999999999997 79999998888765411 1110 11111 111 111110
Q ss_pred CCCCCCCCCCCHHHHHHHHHHH-----------HHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCe
Q 044575 89 KKGRDVRRFPGHKELWLYLKDF-----------CQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADK 157 (454)
Q Consensus 89 ~~~~~~~~~~~~~~~~~yl~~~-----------~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 157 (454)
. .......++.++.+.+ .++.++. +..+ ++..++ .++|++ ++.
T Consensus 74 ----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~--~~~g-~~~~i~--------------~~~v~~-~g~--- 127 (463)
T 2r9z_A 74 ----S-GGTLDWPRLVAGRDRYIGAINSFWDGYVERLGIT--RVDG-HARFVD--------------AHTIEV-EGQ--- 127 (463)
T ss_dssp ----C----CCHHHHHHHHHHHHHHHHHHHHHHHHHTTCE--EEES-CEEEEE--------------TTEEEE-TTE---
T ss_pred ----C-CCCcCHHHHHHHHHHHHHHHHHHHHHHHHHCCCE--EEEe-EEEEcc--------------CCEEEE-CCE---
Confidence 0 0112334444433333 2344554 4444 343343 334655 322
Q ss_pred EEEEEeCEEEEccCCCCCCCCCCCCCcCCccceeEEeecCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEeccc
Q 044575 158 VVEEVFDAVVVATGHYSYPRLPSIKGMDKWKRKQMHSHIYRVPEPFRNEVVVVVGNSLSGQDISMELVEVAKEVHLSAKS 237 (454)
Q Consensus 158 ~~~~~~d~vViAtG~~~~p~~p~i~G~~~~~~~~~~~~~~~~~~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~ 237 (454)
++.||+|||||| +.|..|++||.+. .+++..+..... .+++|+|||+|.+|+|+|..|++.|.+|+++++.
T Consensus 128 --~~~~d~lviAtG--s~p~~p~i~G~~~----~~~~~~~~~~~~-~~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~ 198 (463)
T 2r9z_A 128 --RLSADHIVIATG--GRPIVPRLPGAEL----GITSDGFFALQQ-QPKRVAIIGAGYIGIELAGLLRSFGSEVTVVALE 198 (463)
T ss_dssp --EEEEEEEEECCC--EEECCCSCTTGGG----SBCHHHHHHCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred --EEEcCEEEECCC--CCCCCCCCCCccc----eecHHHHhhhhc-cCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcC
Confidence 689999999999 8999999998742 233333322211 3589999999999999999999999999999999
Q ss_pred CCcCccchh--------hhc-cCCCeEEcCceeEEecCC---cEEEeCCC-EEeeceEEEccCcccCCcCCC--------
Q 044575 238 LNISEGLSK--------VIS-KHNNLHLHPQIDCLREDG---RVTFVDGC-WVTADTILYCTGYSYSFPFLD-------- 296 (454)
Q Consensus 238 ~~~~~~~~~--------~l~-~~~~i~~~~~v~~v~~~~---~v~~~dG~-~i~~D~vI~atG~~~~~~~l~-------- 296 (454)
+.+.+.+.+ .+. ..++++.+..|+++..++ .|.+.||+ ++++|.||+|||++|+.++|.
T Consensus 199 ~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~ 278 (463)
T 2r9z_A 199 DRLLFQFDPLLSATLAENMHAQGIETHLEFAVAALERDAQGTTLVAQDGTRLEGFDSVIWAVGRAPNTRDLGLEAAGIEV 278 (463)
T ss_dssp SSSSTTSCHHHHHHHHHHHHHTTCEEESSCCEEEEEEETTEEEEEETTCCEEEEESEEEECSCEEESCTTSCHHHHTCCC
T ss_pred CccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEeCCcEEEEcCEEEECCCCCcCCCCCCchhcCCcc
Confidence 876544332 222 235788888999987532 57788999 899999999999999987542
Q ss_pred -CCCceeeCCCCcccccCcccCCCCCCCceEecccccc-cchhHHHHHHHHHHHHHcCCC
Q 044575 297 -TKGIVVVDDDRVGPLYEHTFPPSLAPSLSFVGIPRKL-IGFPFFESQAKWIAQLLSGKR 354 (454)
Q Consensus 297 -~~g~i~v~~~~~~~~~~~~~~~~~~p~l~~iG~~~~~-~~~~~a~~qa~~~a~~i~g~~ 354 (454)
++|.+.+|+..+ ++.|++|++||+... ...+.|..||+.+|.++.|..
T Consensus 279 ~~~G~i~vd~~~~----------t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~g~~ 328 (463)
T 2r9z_A 279 QSNGMVPTDAYQN----------TNVPGVYALGDITGRDQLTPVAIAAGRRLAERLFDGQ 328 (463)
T ss_dssp CTTSCCCCCTTSB----------CSSTTEEECGGGGTSCCCHHHHHHHHHHHHHHHHSCC
T ss_pred CCCCCEeECCCCc----------cCCCCEEEEeecCCCcccHHHHHHHHHHHHHHHcCCC
Confidence 345666666544 457999999999854 345799999999999998853
No 30
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=100.00 E-value=9.1e-34 Score=289.75 Aligned_cols=298 Identities=15% Similarity=0.151 Sum_probs=214.2
Q ss_pred ccCCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccc--cccccceecCCccccccCCCC-
Q 044575 9 CAQSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHS--SVYASLRLTSPREIMGYTDFP- 85 (454)
Q Consensus 9 ~~~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~- 85 (454)
|...+||+|||||++|+++|.+|++.|++|+|||+++.+||.|.+.+|.|++.+.. ..+..++ + +..+.
T Consensus 40 ~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~-~-------~~~~g~ 111 (523)
T 1mo9_A 40 DPREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLAR-T-------FSGQYW 111 (523)
T ss_dssp CCSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHH-H-------TTTSTT
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHh-h-------hhhcCc
Confidence 44568999999999999999999999999999999988999999877765431100 0000000 0 01111
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHH-------HH-----HHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeec
Q 044575 86 FVLKKGRDVRRFPGHKELWLYLKD-------FC-----QRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEK 153 (454)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~yl~~-------~~-----~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~ 153 (454)
++. ....+++.+++.+++.. +. ++.++. +.++.+|..++. ++|.+. +
T Consensus 112 ~~~----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~gv~--~~~~~~v~~i~~--------------~~v~~~-g 170 (523)
T 1mo9_A 112 FPD----MTEKVVGIKEVVDLFRAGRNGPHGIMNFQSKEQLNLE--YILNCPAKVIDN--------------HTVEAA-G 170 (523)
T ss_dssp CCC----CTTCCCCHHHHHHHHHHHTHHHHHHHHHHHHHTSCCC--EEESSCCEEEET--------------TEEEET-T
T ss_pred HHH----HHhhhhhHHHHHHHHHhhhhhhhhhhhhcccccCCcE--EEEeeEEEEeeC--------------CEEEEC-C
Confidence 111 22334557778777753 33 445665 555677777652 235543 2
Q ss_pred CCCeEEEEEeCEEEEccCCCCCCCCCCCCCcCCccceeEEeecCC-CCCCCCCCeEEEEcCCCCHHHHHHHHhhhcCeEE
Q 044575 154 KADKVVEEVFDAVVVATGHYSYPRLPSIKGMDKWKRKQMHSHIYR-VPEPFRNEVVVVVGNSLSGQDISMELVEVAKEVH 232 (454)
Q Consensus 154 ~~~~~~~~~~d~vViAtG~~~~p~~p~i~G~~~~~~~~~~~~~~~-~~~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~ 232 (454)
. .+.||+||+||| +.|..|++||.+.. .++++..+. ......+++++|||+|.+|+|+|..+++.|.+|+
T Consensus 171 ~-----~~~~d~lViATG--s~p~~p~i~G~~~~--~v~~~~~~~~~l~~~~g~~vvViGgG~~g~E~A~~l~~~G~~Vt 241 (523)
T 1mo9_A 171 K-----VFKAKNLILAVG--AGPGTLDVPGVNAK--GVFDHATLVEELDYEPGSTVVVVGGSKTAVEYGCFFNATGRRTV 241 (523)
T ss_dssp E-----EEEBSCEEECCC--EECCCCCSTTTTSB--TEEEHHHHHHHCCSCCCSEEEEECCSHHHHHHHHHHHHTTCEEE
T ss_pred E-----EEEeCEEEECCC--CCCCCCCCCCcccC--cEeeHHHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHHcCCeEE
Confidence 2 689999999999 89999999998642 144554443 3333455999999999999999999999999999
Q ss_pred EecccCCcCccchh--------hhcc-CCCeEEcCceeEEec--CC-----cEEEeCCC-EEeeceEEEccCcccCCc-C
Q 044575 233 LSAKSLNISEGLSK--------VISK-HNNLHLHPQIDCLRE--DG-----RVTFVDGC-WVTADTILYCTGYSYSFP-F 294 (454)
Q Consensus 233 l~~r~~~~~~~~~~--------~l~~-~~~i~~~~~v~~v~~--~~-----~v~~~dG~-~i~~D~vI~atG~~~~~~-~ 294 (454)
++++.+.+.+.+.. .+.+ .++++.++.|+++.. ++ .|.+.+|+ ++++|.||+|+|++|+.+ +
T Consensus 242 lv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~~~~ 321 (523)
T 1mo9_A 242 MLVRTEPLKLIKDNETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPRSAEL 321 (523)
T ss_dssp EECSSCTTTTCCSHHHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEECCHHH
T ss_pred EEEecCcccccccHHHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCccCCccC
Confidence 99999887554332 2222 357888889999875 33 25667887 899999999999999987 5
Q ss_pred CC-------CCCceeeCCCCcccccCcccCCCCCCCceEeccccccc-chhHHHHHHHHHHHHHcCCC
Q 044575 295 LD-------TKGIVVVDDDRVGPLYEHTFPPSLAPSLSFVGIPRKLI-GFPFFESQAKWIAQLLSGKR 354 (454)
Q Consensus 295 l~-------~~g~i~v~~~~~~~~~~~~~~~~~~p~l~~iG~~~~~~-~~~~a~~qa~~~a~~i~g~~ 354 (454)
+. ++|.|.||++.+ ++.|++|++||+...+ ..+.|..||+++|.++.|..
T Consensus 322 l~~~gl~~~~~G~i~Vd~~~~----------t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g~~ 379 (523)
T 1mo9_A 322 AKILGLDLGPKGEVLVNEYLQ----------TSVPNVYAVGDLIGGPMEMFKARKSGCYAARNVMGEK 379 (523)
T ss_dssp HHHHTCCBCTTSCBCCCTTSB----------CSSTTEEECGGGGCSSCSHHHHHHHHHHHHHHHTTCC
T ss_pred HHHcCCccCCCCCEEECCCCc----------cCCCCEEEEeecCCCcccHHHHHHHHHHHHHHHcCCC
Confidence 43 456677776654 4579999999999754 45799999999999999853
No 31
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=100.00 E-value=3.9e-33 Score=267.71 Aligned_cols=282 Identities=18% Similarity=0.214 Sum_probs=205.7
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKKG 91 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (454)
.+||+|||||++|+++|..|++.|++|+|||+ ..+||.|.+.... ..++.+
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~-~~~gg~~~~~~~~---------------------~~~~~~------- 55 (320)
T 1trb_A 5 HSKLLILGSGPAGYTAAVYAARANLQPVLITG-MEKGGQLTTTTEV---------------------ENWPGD------- 55 (320)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCCEEECC-SSTTGGGGGCSBC---------------------CCSTTC-------
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEcc-CCCCceEecchhh---------------------hhCCCC-------
Confidence 47999999999999999999999999999997 4789988753210 001111
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccC
Q 044575 92 RDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATG 171 (454)
Q Consensus 92 ~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG 171 (454)
+......++.+++.++++++++. +++++ |..++...+ .|++ +.++. ++.||+||+|||
T Consensus 56 ---~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-v~~i~~~~~----------~~~v-~~~~~-----~~~~~~lv~AtG 113 (320)
T 1trb_A 56 ---PNDLTGPLLMERMHEHATKFETE--IIFDH-INKVDLQNR----------PFRL-NGDNG-----EYTCDALIIATG 113 (320)
T ss_dssp ---CSSCBHHHHHHHHHHHHHHTTCE--EECCC-EEEEECSSS----------SEEE-EESSC-----EEEEEEEEECCC
T ss_pred ---CCCCCHHHHHHHHHHHHHHCCCE--EEEee-eeEEEecCC----------EEEE-EeCCC-----EEEcCEEEECCC
Confidence 11235678899999999998887 77775 888876532 6877 54443 789999999999
Q ss_pred CCCCCCCCCCCCcCCccceeEEeecCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCcCc--cchhhh-
Q 044575 172 HYSYPRLPSIKGMDKWKRKQMHSHIYRVPEPFRNEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNISE--GLSKVI- 248 (454)
Q Consensus 172 ~~~~p~~p~i~G~~~~~~~~~~~~~~~~~~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~~~--~~~~~l- 248 (454)
+.|..|++||.+.+.+..+|+..+.......+++|+|||+|.+|+|+|..|++.+.+|++++|.+.+.. .+.+.+
T Consensus 114 --~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~l~ 191 (320)
T 1trb_A 114 --ASARYLGLPSEEAFKGRGVSACATSDGFFYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRAEKILIKRLM 191 (320)
T ss_dssp --EEECCCCCHHHHHTBTTTEESCHHHHGGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCCCHHHHHHHH
T ss_pred --CCcCCCCCCChHHhCCceeEecccCCccccCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCccccCHHHHHHHH
Confidence 788889899877665555655443333335679999999999999999999999999999999887632 222222
Q ss_pred ---c-cCCCeEEcCceeEEecCC----cEEEeC----C--CEEeeceEEEccCcccCCcCCCC-----CCceeeCCCCcc
Q 044575 249 ---S-KHNNLHLHPQIDCLREDG----RVTFVD----G--CWVTADTILYCTGYSYSFPFLDT-----KGIVVVDDDRVG 309 (454)
Q Consensus 249 ---~-~~~~i~~~~~v~~v~~~~----~v~~~d----G--~~i~~D~vI~atG~~~~~~~l~~-----~g~i~v~~~~~~ 309 (454)
. ..++++.+..|+++..++ .|++.+ | +++++|.||+|+|++|+.++++. +|.+.+|+....
T Consensus 192 ~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~~~~~l~~~~G~i~vd~~~~~ 271 (320)
T 1trb_A 192 DKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIFEGQLELENGYIKVQSGIHG 271 (320)
T ss_dssp HHHHTSSEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEEECSCEEESCGGGTTTSCEETTEECCCCSSSS
T ss_pred HhcccCCeEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEEEEeCCCCChHHhcccccccCceEEECCCccc
Confidence 2 234777888999987554 277775 5 46889999999999999888752 234444443210
Q ss_pred cccCcccCCCCCCCceEeccccccc--chhHHHHHHHHHHHHHc
Q 044575 310 PLYEHTFPPSLAPSLSFVGIPRKLI--GFPFFESQAKWIAQLLS 351 (454)
Q Consensus 310 ~~~~~~~~~~~~p~l~~iG~~~~~~--~~~~a~~qa~~~a~~i~ 351 (454)
.... ++.|++|++||+...+ ....|..||+.+|.++.
T Consensus 272 ----~~~~-t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~ 310 (320)
T 1trb_A 272 ----NATQ-TSIPGVFAAGDVMDHIYRQAITSAGTGCMAALDAE 310 (320)
T ss_dssp ----CTTB-CSSTTEEECGGGGCSSSCCHHHHHHHHHHHHHHHH
T ss_pred ----cccc-CCCCCEEEcccccCCcchhhhhhhccHHHHHHHHH
Confidence 0012 4569999999998653 45678889988887664
No 32
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=100.00 E-value=3.4e-34 Score=287.76 Aligned_cols=290 Identities=17% Similarity=0.231 Sum_probs=198.9
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCc-cccc-cccceecCCccccccCCCCCCC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEV-HSSV-YASLRLTSPREIMGYTDFPFVL 88 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~ 88 (454)
..+||+|||||++|+++|..|++.|.+|+|||++ .+||+|.+.+|.|++.+ .+.. +..++.+.+ .+.++.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~-------~~g~~~ 74 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAMYGQKCALIEAK-ELGGTCVNVGCVPKKVMWHAAQIREAIHMYGP-------DYGFDT 74 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHTTGG-------GGTEEE
T ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCC-CCCCcccccCccChHHHHHHHHHHHHHHHHHH-------hcCccC
Confidence 3579999999999999999999999999999997 79999998888766411 1110 000100000 010000
Q ss_pred CCCCCCCCCCCHHHHHHHHHH-----------HHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCe
Q 044575 89 KKGRDVRRFPGHKELWLYLKD-----------FCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADK 157 (454)
Q Consensus 89 ~~~~~~~~~~~~~~~~~yl~~-----------~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 157 (454)
. .......++.++..+ ..++.++. +..+ ++..++ .++|.+ ++.
T Consensus 75 ----~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~--~~~g-~~~~i~--------------~~~v~~-~g~--- 128 (450)
T 1ges_A 75 ----T-INKFNWETLIASRTAYIDRIHTSYENVLGKNNVD--VIKG-FARFVD--------------AKTLEV-NGE--- 128 (450)
T ss_dssp ----E-EEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCE--EEES-CCEEEE--------------TTEEEE-TTE---
T ss_pred ----C-CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEEe-EEEEec--------------CCEEEE-CCE---
Confidence 0 000122333333322 23444554 4444 333443 234555 322
Q ss_pred EEEEEeCEEEEccCCCCCCCCCCCCCcCCccceeEEeecCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEeccc
Q 044575 158 VVEEVFDAVVVATGHYSYPRLPSIKGMDKWKRKQMHSHIYRVPEPFRNEVVVVVGNSLSGQDISMELVEVAKEVHLSAKS 237 (454)
Q Consensus 158 ~~~~~~d~vViAtG~~~~p~~p~i~G~~~~~~~~~~~~~~~~~~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~ 237 (454)
++.||+|||||| +.|..|++||.+. ..++..+..... .+++|+|||+|.+|+|+|..|++.|.+|+++++.
T Consensus 129 --~~~~d~lviAtG--s~p~~p~i~g~~~----~~~~~~~~~~~~-~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~ 199 (450)
T 1ges_A 129 --TITADHILIATG--GRPSHPDIPGVEY----GIDSDGFFALPA-LPERVAVVGAGYIGVELGGVINGLGAKTHLFEMF 199 (450)
T ss_dssp --EEEEEEEEECCC--EEECCCCSTTGGG----SBCHHHHHHCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred --EEEeCEEEECCC--CCCCCCCCCCccc----eecHHHhhhhhh-cCCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeC
Confidence 689999999999 8999999998742 233333222111 3689999999999999999999999999999998
Q ss_pred CCcCccchhh--------hc-cCCCeEEcCceeEEecC--C--cEEEeCCCEEeeceEEEccCcccCCcCC---------
Q 044575 238 LNISEGLSKV--------IS-KHNNLHLHPQIDCLRED--G--RVTFVDGCWVTADTILYCTGYSYSFPFL--------- 295 (454)
Q Consensus 238 ~~~~~~~~~~--------l~-~~~~i~~~~~v~~v~~~--~--~v~~~dG~~i~~D~vI~atG~~~~~~~l--------- 295 (454)
+.+.+.+++. +. ..++++.++.|+++..+ + .|.+.||+++++|.||+|+|++|+.++|
T Consensus 200 ~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~i~~D~vv~a~G~~p~~~~l~~~~~gl~~ 279 (450)
T 1ges_A 200 DAPLPSFDPMISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGREPANDNINLEAAGVKT 279 (450)
T ss_dssp SSSSTTSCHHHHHHHHHHHHHHSCEEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESCTTSCHHHHTCCB
T ss_pred CchhhhhhHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCcEEEEEECCCcEEEcCEEEECCCCCcCCCCCCchhcCceE
Confidence 8765443322 22 23578888899998753 2 4778899999999999999999998754
Q ss_pred CCCCceeeCCCCcccccCcccCCCCCCCceEecccccc-cchhHHHHHHHHHHHHHcCC
Q 044575 296 DTKGIVVVDDDRVGPLYEHTFPPSLAPSLSFVGIPRKL-IGFPFFESQAKWIAQLLSGK 353 (454)
Q Consensus 296 ~~~g~i~v~~~~~~~~~~~~~~~~~~p~l~~iG~~~~~-~~~~~a~~qa~~~a~~i~g~ 353 (454)
+++|.+.+|+..+ ++.|++|++||+... ...+.|..||+.+|.++.|.
T Consensus 280 ~~~g~i~vd~~~~----------t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 328 (450)
T 1ges_A 280 NEKGYIVVDKYQN----------TNIEGIYAVGDNTGAVELTPVAVAAGRRLSERLFNN 328 (450)
T ss_dssp CTTSCBCCCTTSB----------CSSTTEEECSGGGTSCCCHHHHHHHHHHHHHHHHTT
T ss_pred CCCCCEeECCCCc----------cCCCCEEEEeccCCCCccHHHHHHHHHHHHHHHcCC
Confidence 2346666666544 457999999999854 35589999999999999885
No 33
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=100.00 E-value=1.9e-32 Score=279.62 Aligned_cols=281 Identities=17% Similarity=0.200 Sum_probs=213.6
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKK 90 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (454)
..+||+||||||||+++|.+|++.|++|+|||+ .+||.|....... .+..+
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~--~~GG~~~~~~~~~---------------------~~~~~------ 261 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGE--RFGGQVLDTVDIE---------------------NYISV------ 261 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECS--STTGGGTTCSCBC---------------------CBTTB------
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCeEEEEEC--CCCCccccccccc---------------------ccCCC------
Confidence 468999999999999999999999999999986 5899987432100 00011
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEcc
Q 044575 91 GRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVAT 170 (454)
Q Consensus 91 ~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAt 170 (454)
.+....++..++.++++++++. ++++++|.+++..... .+ .|+|++.++. ++.||+||+||
T Consensus 262 -----~~~~~~~l~~~l~~~~~~~gv~--v~~~~~v~~i~~~~~~------~~-~~~V~~~~g~-----~~~~d~vVlAt 322 (521)
T 1hyu_A 262 -----PKTEGQKLAGALKAHVSDYDVD--VIDSQSASKLVPAATE------GG-LHQIETASGA-----VLKARSIIIAT 322 (521)
T ss_dssp -----SSBCHHHHHHHHHHHHHTSCEE--EECSCCEEEEECCSST------TS-CEEEEETTSC-----EEEEEEEEECC
T ss_pred -----CCCCHHHHHHHHHHHHHHcCCE--EEcCCEEEEEEeccCC------Cc-eEEEEECCCC-----EEEcCEEEECC
Confidence 1245678999999999988877 8889999999864221 01 6888887654 78999999999
Q ss_pred CCCCCCCCCCCCCcCCccceeEEeecCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCcCc--cchhhh
Q 044575 171 GHYSYPRLPSIKGMDKWKRKQMHSHIYRVPEPFRNEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNISE--GLSKVI 248 (454)
Q Consensus 171 G~~~~p~~p~i~G~~~~~~~~~~~~~~~~~~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~~~--~~~~~l 248 (454)
| +.|+.|++||.+.+.+..++.........+.+++|+|||+|.+|+|+|..|++.+.+|+++.|.+.+.. .+.+.+
T Consensus 323 G--~~~~~~~ipG~~~~~~~~v~~~~~~~~~~~~~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~~~~~l~~~l 400 (521)
T 1hyu_A 323 G--AKWRNMNVPGEDQYRTKGVTYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKADQVLQDKV 400 (521)
T ss_dssp C--EEECCCCCTTTTTTTTTTEECCTTCCGGGGBTSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCCSCHHHHHHH
T ss_pred C--CCcCCCCCCChhhhcCceEEEeecCchhhcCCCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccCcCHHHHHHH
Confidence 9 788888999988776666665554444456789999999999999999999999999999999887743 233344
Q ss_pred cc--CCCeEEcCceeEEecCC----cEEEeC---CC--EEeeceEEEccCcccCCcCCCC------CCceeeCCCCcccc
Q 044575 249 SK--HNNLHLHPQIDCLREDG----RVTFVD---GC--WVTADTILYCTGYSYSFPFLDT------KGIVVVDDDRVGPL 311 (454)
Q Consensus 249 ~~--~~~i~~~~~v~~v~~~~----~v~~~d---G~--~i~~D~vI~atG~~~~~~~l~~------~g~i~v~~~~~~~~ 311 (454)
.+ .++++.+..++++..++ .|.+.+ |+ ++++|.||+|+|++|+++++.. .|.+.+|++..
T Consensus 401 ~~~~gV~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~pn~~~l~~~l~~~~~G~I~Vd~~~~--- 477 (521)
T 1hyu_A 401 RSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHSVALAGIFVQIGLLPNTHWLEGALERNRMGEIIIDAKCE--- 477 (521)
T ss_dssp TTCTTEEEECSEEEEEEEECSSSEEEEEEEETTTCCEEEEECSEEEECCCEEESCGGGTTTSCBCTTSCBCCCTTCB---
T ss_pred hcCCCcEEEeCCEEEEEEcCCCcEEEEEEEeCCCCceEEEEcCEEEECcCCCCCchHHhhhhccCCCCcEEeCCCCC---
Confidence 43 34677788899887542 356664 54 5789999999999999988753 34455554333
Q ss_pred cCcccCCCCCCCceEeccccccc--chhHHHHHHHHHHHHHc
Q 044575 312 YEHTFPPSLAPSLSFVGIPRKLI--GFPFFESQAKWIAQLLS 351 (454)
Q Consensus 312 ~~~~~~~~~~p~l~~iG~~~~~~--~~~~a~~qa~~~a~~i~ 351 (454)
++.|++|++||+...+ ....|..||+.+|.++.
T Consensus 478 -------ts~p~VfA~GD~~~~~~~~~~~A~~~g~~aa~~i~ 512 (521)
T 1hyu_A 478 -------TSVKGVFAAGDCTTVPYKQIIIATGEGAKASLSAF 512 (521)
T ss_dssp -------CSSTTEEECSTTBCCSSCCHHHHHHHHHHHHHHHH
T ss_pred -------CCCCCEEEeecccCCCcceeeehHHhHHHHHHHHH
Confidence 4579999999998654 45788899998887653
No 34
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=100.00 E-value=1.4e-33 Score=285.96 Aligned_cols=301 Identities=15% Similarity=0.153 Sum_probs=204.4
Q ss_pred ccCCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCc-cc-cccccceecCCccccccCCCCC
Q 044575 9 CAQSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEV-HS-SVYASLRLTSPREIMGYTDFPF 86 (454)
Q Consensus 9 ~~~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~ 86 (454)
|+..+||+|||||++|+++|..|++.|++|+|||+++.+||.|.+.+|.|++.+ .. ..+..+.. .. ..+.++
T Consensus 3 m~~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~-~~-----~~gi~~ 76 (482)
T 1ojt_A 3 ADAEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRH-LA-----ANGIKY 76 (482)
T ss_dssp SEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHH-GG-----GGTCCC
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHH-HH-----hCCccc
Confidence 344589999999999999999999999999999998999999988777654311 00 01111100 00 001111
Q ss_pred CCCCCCCCCCCCCHHHHHH-----------HHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeec--
Q 044575 87 VLKKGRDVRRFPGHKELWL-----------YLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEK-- 153 (454)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~-----------yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~-- 153 (454)
.. .......+.. .+...+++.++. +..++.+. ++ .. .+.|...++
T Consensus 77 ~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~--~~~g~~~~-~~---~~---------~v~v~~~~g~~ 134 (482)
T 1ojt_A 77 PE-------PELDIDMLRAYKDGVVSRLTGGLAGMAKSRKVD--VIQGDGQF-LD---PH---------HLEVSLTAGDA 134 (482)
T ss_dssp CC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCE--EEEEEEEE-EE---TT---------EEEEEEEEEEE
T ss_pred CC-------CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcE--EEeeEEEE-cc---CC---------EEEEEecCCcc
Confidence 00 0112233322 234455566766 66665443 22 11 566654443
Q ss_pred -----CCCeEEEEEeCEEEEccCCCCCCCCCC-CCCcCCccceeEEeecCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhh
Q 044575 154 -----KADKVVEEVFDAVVVATGHYSYPRLPS-IKGMDKWKRKQMHSHIYRVPEPFRNEVVVVVGNSLSGQDISMELVEV 227 (454)
Q Consensus 154 -----~~~~~~~~~~d~vViAtG~~~~p~~p~-i~G~~~~~~~~~~~~~~~~~~~~~~k~vvVVG~G~sg~e~A~~l~~~ 227 (454)
.+++..++.||+||+||| +.|..|+ +| .+. .++++.+...... .+++++|||+|.+|+|+|..|++.
T Consensus 135 ~~~~~~~g~~~~i~ad~lViAtG--s~p~~~~~i~-~~~---~v~~~~~~~~~~~-~~~~vvViGgG~ig~E~A~~l~~~ 207 (482)
T 1ojt_A 135 YEQAAPTGEKKIVAFKNCIIAAG--SRVTKLPFIP-EDP---RIIDSSGALALKE-VPGKLLIIGGGIIGLEMGTVYSTL 207 (482)
T ss_dssp TTEEEEEEEEEEEEEEEEEECCC--EEECCCSSCC-CCT---TEECHHHHTTCCC-CCSEEEEESCSHHHHHHHHHHHHH
T ss_pred cccccccCcceEEEcCEEEECCC--CCCCCCCCCC-ccC---cEEcHHHHhcccc-cCCeEEEECCCHHHHHHHHHHHHc
Confidence 012234789999999999 7788776 55 222 3455544433322 368999999999999999999999
Q ss_pred cCeEEEecccCCcCccchh--------hhccC-CCeEEcCceeEEecCC---cEEEeC----CCEEeeceEEEccCcccC
Q 044575 228 AKEVHLSAKSLNISEGLSK--------VISKH-NNLHLHPQIDCLREDG---RVTFVD----GCWVTADTILYCTGYSYS 291 (454)
Q Consensus 228 ~~~V~l~~r~~~~~~~~~~--------~l~~~-~~i~~~~~v~~v~~~~---~v~~~d----G~~i~~D~vI~atG~~~~ 291 (454)
|.+|+++++.+++.+.+.+ .+.+. ++++.+..|+++..++ .|++.| |+++++|.||+|+|++|+
T Consensus 208 G~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~~p~ 287 (482)
T 1ojt_A 208 GSRLDVVEMMDGLMQGADRDLVKVWQKQNEYRFDNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGRAPN 287 (482)
T ss_dssp TCEEEEECSSSSSSTTSCHHHHHHHHHHHGGGEEEEECSCEEEEEEEETTEEEEEEESSSCCSSCEEESCEEECCCEEEC
T ss_pred CCeEEEEEECCccccccCHHHHHHHHHHHHhcCCEEEECCEEEEEEEcCCeEEEEEeccCCCceEEEcCEEEECcCCCcC
Confidence 9999999999887554432 23232 4778888899987542 467777 788999999999999999
Q ss_pred CcCC--C-------CCCceeeCCCCcccccCcccCCCCCCCceEeccccccc-chhHHHHHHHHHHHHHcCCC
Q 044575 292 FPFL--D-------TKGIVVVDDDRVGPLYEHTFPPSLAPSLSFVGIPRKLI-GFPFFESQAKWIAQLLSGKR 354 (454)
Q Consensus 292 ~~~l--~-------~~g~i~v~~~~~~~~~~~~~~~~~~p~l~~iG~~~~~~-~~~~a~~qa~~~a~~i~g~~ 354 (454)
.++| . ++|.|.+|++.+ ++.|++|++||+...+ ..+.|..||+.+|.++.|+.
T Consensus 288 ~~~l~~~~~gl~~~~~G~i~vd~~~~----------t~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~g~~ 350 (482)
T 1ojt_A 288 GKLISAEKAGVAVTDRGFIEVDKQMR----------TNVPHIYAIGDIVGQPMLAHKAVHEGHVAAENCAGHK 350 (482)
T ss_dssp GGGTTGGGTTCCCCTTSCCCCCTTSB----------CSSTTEEECGGGTCSSCCHHHHHHHHHHHHHHHTTCC
T ss_pred CCCCChhhcCceeCCCCCEeeCCCcc----------cCCCCEEEEEcccCCCccHHHHHHHHHHHHHHHcCCC
Confidence 8874 2 235566665544 4579999999998654 45799999999999999864
No 35
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=100.00 E-value=6e-33 Score=264.56 Aligned_cols=278 Identities=16% Similarity=0.223 Sum_probs=200.1
Q ss_pred cCCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCC
Q 044575 10 AQSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLK 89 (454)
Q Consensus 10 ~~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (454)
++.+||+||||||||++||.+|++.|++|+|||+. ..||.+... |+ +++.
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~-~~gg~~~~~------------~~--------------~~~~--- 53 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNN-TNRNRVTQN------------SH--------------GFIT--- 53 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECS-CCGGGGSSC------------BC--------------CSTT---
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCCeeeee------------cC--------------CccC---
Confidence 45699999999999999999999999999999986 456654311 10 1110
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEc
Q 044575 90 KGRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVA 169 (454)
Q Consensus 90 ~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViA 169 (454)
..-.+..++.+...+...+++.. ..++..+..+...+.+ .++|.+.++. ++.||+||||
T Consensus 54 -----~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~---------~~~v~~~~g~-----~~~a~~liiA 112 (304)
T 4fk1_A 54 -----RDGIKPEEFKEIGLNEVMKYPSV--HYYEKTVVMITKQSTG---------LFEIVTKDHT-----KYLAERVLLA 112 (304)
T ss_dssp -----CTTBCHHHHHHHHHHHHTTSTTE--EEEECCEEEEEECTTS---------CEEEEETTCC-----EEEEEEEEEC
T ss_pred -----CCCCCHHHHHHHHHHHHHhcCCE--EEEeeEEEEeeecCCC---------cEEEEECCCC-----EEEeCEEEEc
Confidence 01123456666655555555433 3455667777766544 7888887765 8899999999
Q ss_pred cCCCCCCCCCCCCCcCCccceeEEeecCCCCCCCCCCeEEEEcCCCC-HHHHHHHHhhhcCeEEEecccCCcCccchhhh
Q 044575 170 TGHYSYPRLPSIKGMDKWKRKQMHSHIYRVPEPFRNEVVVVVGNSLS-GQDISMELVEVAKEVHLSAKSLNISEGLSKVI 248 (454)
Q Consensus 170 tG~~~~p~~p~i~G~~~~~~~~~~~~~~~~~~~~~~k~vvVVG~G~s-g~e~A~~l~~~~~~V~l~~r~~~~~~~~~~~l 248 (454)
|| +.|+.|++||.+.+.+..++.........+++++++|||+|.. +.|+|..+.+.+++|+++.+.+.+.+.+.+.+
T Consensus 113 TG--s~p~~p~i~G~~~~~~~~v~~~~~~~~~~~~~~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~~~~~~~~~~l 190 (304)
T 4fk1_A 113 TG--MQEEFPSIPNVREYYGKSLFSCPYCDGWELKDQPLIIISENEDHTLHMTKLVYNWSTDLVIATNGNELSQTIMDEL 190 (304)
T ss_dssp CC--CEEECCSCTTHHHHBTTTEESCHHHHSGGGTTSCEEEECCSHHHHHHHHHHHTTTCSCEEEECSSCCCCHHHHHHH
T ss_pred cC--CccccccccCccccccceeeeccccchhHhcCCceeeecCCCchhhhHHHHHHhCCceEEEEeccccchhhhhhhh
Confidence 99 8999999999887766666655544444567788999988865 67888888899999999999888877777766
Q ss_pred ccCCCeEEcCceeEEecCC----cEEEeCCCEEeeceEEEccCcccCCcCC-------CCCCceeeCCCCcccccCcccC
Q 044575 249 SKHNNLHLHPQIDCLREDG----RVTFVDGCWVTADTILYCTGYSYSFPFL-------DTKGIVVVDDDRVGPLYEHTFP 317 (454)
Q Consensus 249 ~~~~~i~~~~~v~~v~~~~----~v~~~dG~~i~~D~vI~atG~~~~~~~l-------~~~g~i~v~~~~~~~~~~~~~~ 317 (454)
.+....+....++.+..++ .|.+.||+++++|.+|+++|..|+..++ +++|.|.+|++.+
T Consensus 191 ~~~g~~~~~~~v~~~~~~~~~~~~v~~~~g~~i~~~~~vi~~g~~~~~~~~~~~g~~~~~~G~I~vd~~~~--------- 261 (304)
T 4fk1_A 191 SNKNIPVITESIRTLQGEGGYLKKVEFHSGLRIERAGGFIVPTFFRPNQFIEQLGCELQSNGTFVIDDFGR--------- 261 (304)
T ss_dssp HTTTCCEECSCEEEEESGGGCCCEEEETTSCEECCCEEEECCEEECSSCHHHHTTCCCCTTSSSCSSTTCB---------
T ss_pred hccceeEeeeeEEEeecCCCeeeeeeccccceeeecceeeeeccccCChhhhhcCeEECCCCCEEECcCCc---------
Confidence 6655333444577776443 4888999999998888888777765553 3556677776655
Q ss_pred CCCCCCceEeccccccc--chhHHHHHHHHHHHHH
Q 044575 318 PSLAPSLSFVGIPRKLI--GFPFFESQAKWIAQLL 350 (454)
Q Consensus 318 ~~~~p~l~~iG~~~~~~--~~~~a~~qa~~~a~~i 350 (454)
|+.|++|++||+...+ ....|..|++.+|..+
T Consensus 262 -Ts~p~IyA~GDv~~~~~~~~~~A~~~G~~AA~~i 295 (304)
T 4fk1_A 262 -TSEKNIYLAGETTTQGPSSLIIAASQGNKAAIAI 295 (304)
T ss_dssp -CSSTTEEECSHHHHTSCCCHHHHHHHHHHHHHHH
T ss_pred -cCCCCEEEEeccCCCcchHHHHHHHHHHHHHHHH
Confidence 5679999999998533 2457778888887655
No 36
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=3.2e-33 Score=284.27 Aligned_cols=294 Identities=16% Similarity=0.211 Sum_probs=193.2
Q ss_pred CcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCc-cccccccceecCCccccccCCCCCCCCCC
Q 044575 13 KNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEV-HSSVYASLRLTSPREIMGYTDFPFVLKKG 91 (454)
Q Consensus 13 ~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (454)
+||+|||||+||++||+.|++.|.+|+|||++ .+||+|.+.+|.|++.+ .+..+.....+. ..+.+..
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~c~~~gc~P~k~l~~~a~~~~~~~~~-------~~~g~~~--- 71 (500)
T 1onf_A 3 YDLIVIGGGSGGMAAARRAARHNAKVALVEKS-RLGGTCVNVGCVPKKIMFNAASVHDILENS-------RHYGFDT--- 71 (500)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-STTHHHHHTSHHHHHHHHHHHHHHHHHHHG-------GGGTCCC---
T ss_pred cCEEEECCCHHHHHHHHHHHHCCCcEEEEeCC-CcCccccccCCcchHHHHHHHHHHHHHHhh-------HhcCCcc---
Confidence 79999999999999999999999999999997 59999998888665411 000000000000 0111111
Q ss_pred CCCCCCCCHHHHH-----------HHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEee------cC
Q 044575 92 RDVRRFPGHKELW-----------LYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKE------KK 154 (454)
Q Consensus 92 ~~~~~~~~~~~~~-----------~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~------~~ 154 (454)
. ......++. .++....++.++. +..++ +..++. . .+++.... ..
T Consensus 72 -~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~--~~~g~-~~~id~---~---------~v~v~~~~~~~~~~~~ 133 (500)
T 1onf_A 72 -K--FSFNLPLLVERRDKYIQRLNNIYRQNLSKDKVD--LYEGT-ASFLSE---N---------RILIKGTKDNNNKDNG 133 (500)
T ss_dssp -C--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCE--EEESC-CCCC-------------------------------
T ss_pred -C--CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEEeE-EEEeeC---C---------EEEEEecccccccccc
Confidence 0 011222222 2233444555655 44443 222321 1 33332200 00
Q ss_pred CCeEEEEEeCEEEEccCCCCCCCCCCCCCcCCccceeEEeecCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEe
Q 044575 155 ADKVVEEVFDAVVVATGHYSYPRLPSIKGMDKWKRKQMHSHIYRVPEPFRNEVVVVVGNSLSGQDISMELVEVAKEVHLS 234 (454)
Q Consensus 155 ~~~~~~~~~d~vViAtG~~~~p~~p~i~G~~~~~~~~~~~~~~~~~~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~ 234 (454)
.+...++.||+|||||| +.|..|++||.+. .+++.++..... +++|+|||+|.+|+|+|..|++.|.+|+++
T Consensus 134 ~~~~~~~~~d~lViAtG--s~p~~p~i~G~~~----~~~~~~~~~~~~--~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv 205 (500)
T 1onf_A 134 PLNEEILEGRNILIAVG--NKPVFPPVKGIEN----TISSDEFFNIKE--SKKIGIVGSGYIAVELINVIKRLGIDSYIF 205 (500)
T ss_dssp -------CBSSEEECCC--CCBCCCSCTTGGG----CEEHHHHTTCCC--CSEEEEECCSHHHHHHHHHHHTTTCEEEEE
T ss_pred CCCceEEEeCEEEECCC--CCCCCCCCCCCCc----ccCHHHHhccCC--CCeEEEECChHHHHHHHHHHHHcCCeEEEE
Confidence 00122688999999999 8999999999742 456655544433 799999999999999999999999999999
Q ss_pred cccCCcCccchh--------hhcc-CCCeEEcCceeEEecC--C--cEEEeCCCE-EeeceEEEccCcccCCcCC--CC-
Q 044575 235 AKSLNISEGLSK--------VISK-HNNLHLHPQIDCLRED--G--RVTFVDGCW-VTADTILYCTGYSYSFPFL--DT- 297 (454)
Q Consensus 235 ~r~~~~~~~~~~--------~l~~-~~~i~~~~~v~~v~~~--~--~v~~~dG~~-i~~D~vI~atG~~~~~~~l--~~- 297 (454)
++.+.+.+.+++ .+.+ .++++.+..|+++..+ + .|.+.||++ +++|.||+|+|++|+.++| ..
T Consensus 206 ~~~~~~l~~~d~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~ 285 (500)
T 1onf_A 206 ARGNRILRKFDESVINVLENDMKKNNINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGRSPDTENLKLEKL 285 (500)
T ss_dssp CSSSSSCTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEESSTTCEEEEETTSCEEEEESEEEECCCBCCTTTTSSCTTT
T ss_pred ecCCccCcccchhhHHHHHHHHHhCCCEEEECCEEEEEEEcCCceEEEEECCCcEEEECCEEEECCCCCcCCCCCCchhc
Confidence 999887554432 2222 3578888999999753 2 477789988 9999999999999998654 32
Q ss_pred -----CCceeeCCCCcccccCcccCCCCCCCceEecccc----------------------------------cc-cchh
Q 044575 298 -----KGIVVVDDDRVGPLYEHTFPPSLAPSLSFVGIPR----------------------------------KL-IGFP 337 (454)
Q Consensus 298 -----~g~i~v~~~~~~~~~~~~~~~~~~p~l~~iG~~~----------------------------------~~-~~~~ 337 (454)
+|.+.+|+..+ ++.|++|++||+. .. ...+
T Consensus 286 g~~~~~G~i~vd~~~~----------t~~~~iya~GD~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (500)
T 1onf_A 286 NVETNNNYIVVDENQR----------TSVNNIYAVGDCCMVKKSKEIEDLNLLKLYNEERYLNKKENVTEDIFYNVQLTP 355 (500)
T ss_dssp TCCBSSSCEEECTTCB----------CSSSSEEECSTTEEEC------------------------------CBCCCCHH
T ss_pred CccccCCEEEECCCcc----------cCCCCEEEEeccccccccccccccccccccccccccccccccccccCCcccchh
Confidence 34566666544 4569999999987 12 2357
Q ss_pred HHHHHHHHHHHHHcCC
Q 044575 338 FFESQAKWIAQLLSGK 353 (454)
Q Consensus 338 ~a~~qa~~~a~~i~g~ 353 (454)
.|..||+.+|+++.|.
T Consensus 356 ~A~~~g~~aa~~i~g~ 371 (500)
T 1onf_A 356 VAINAGRLLADRLFLK 371 (500)
T ss_dssp HHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHhCC
Confidence 8999999999999875
No 37
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=1.6e-33 Score=284.78 Aligned_cols=305 Identities=17% Similarity=0.166 Sum_probs=205.8
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccc--cccccceecCCccccccCCCCCCC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHS--SVYASLRLTSPREIMGYTDFPFVL 88 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 88 (454)
.++||+|||||+||+++|..|++.|++|+|||+++.+||.|.+.+|.|++.+.. ..+..+..+.....+.+....+
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~-- 82 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVEI-- 82 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESCEEE--
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCCCcc--
Confidence 468999999999999999999999999999999989999998877766541100 0111110000000000000000
Q ss_pred CCCCCCCCCC-CHH----HHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEe
Q 044575 89 KKGRDVRRFP-GHK----ELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVF 163 (454)
Q Consensus 89 ~~~~~~~~~~-~~~----~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 163 (454)
+...+. ... .+..++..++++.++. +++++.+. ++. . .|+|.+.++ ...++.|
T Consensus 83 ----~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~--~~~g~~~~-~~~---~---------~~~v~~~~G---~~~~i~~ 140 (470)
T 1dxl_A 83 ----DLAAMMGQKDKAVSNLTRGIEGLFKKNKVT--YVKGYGKF-VSP---S---------EISVDTIEG---ENTVVKG 140 (470)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHHHTCE--EEESCEEE-EET---T---------EEEECCSSS---CCEEEEC
T ss_pred ----CHHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEEeEEEE-ecC---C---------EEEEEeCCC---ceEEEEc
Confidence 000000 011 2333445566667776 77776553 432 1 666655433 1236899
Q ss_pred CEEEEccCCCCCCCCCCCCCcCCccceeEEeecCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCcCcc
Q 044575 164 DAVVVATGHYSYPRLPSIKGMDKWKRKQMHSHIYRVPEPFRNEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNISEG 243 (454)
Q Consensus 164 d~vViAtG~~~~p~~p~i~G~~~~~~~~~~~~~~~~~~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~~~~ 243 (454)
|+||+||| +.|..|+++|.+.. .++++.+...... .+++|+|||+|.+|+|+|..|++.|.+|+++++.+.+.+.
T Consensus 141 d~lIiAtG--s~p~~p~~~g~~~~--~v~~~~~~~~~~~-~~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~ 215 (470)
T 1dxl_A 141 KHIIIATG--SDVKSLPGVTIDEK--KIVSSTGALALSE-IPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVPT 215 (470)
T ss_dssp SEEEECCC--EEECCBTTBCCCSS--SEECHHHHTTCSS-CCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT
T ss_pred CEEEECCC--CCCCCCCCCCCCcc--cEEeHHHhhhhhh-cCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc
Confidence 99999999 88999988886541 2455544433322 4689999999999999999999999999999999887554
Q ss_pred chh--------hhcc-CCCeEEcCceeEEecCC---cEEEe---CC--CEEeeceEEEccCcccCCcCC--CC-------
Q 044575 244 LSK--------VISK-HNNLHLHPQIDCLREDG---RVTFV---DG--CWVTADTILYCTGYSYSFPFL--DT------- 297 (454)
Q Consensus 244 ~~~--------~l~~-~~~i~~~~~v~~v~~~~---~v~~~---dG--~~i~~D~vI~atG~~~~~~~l--~~------- 297 (454)
+.+ .+.+ .++++.+..|+++..++ .+.+. +| +++++|.||+|+|++|+.+++ ..
T Consensus 216 ~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~ 295 (470)
T 1dxl_A 216 MDAEIRKQFQRSLEKQGMKFKLKTKVVGVDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGRTPFTSGLNLDKIGVETDK 295 (470)
T ss_dssp SCHHHHHHHHHHHHHSSCCEECSEEEEEEECSSSSEEEEEEESSSCCCEEEEESEEECCCCEEECCTTSCCTTTTCCBCS
T ss_pred ccHHHHHHHHHHHHHcCCEEEeCCEEEEEEEcCCeEEEEEEecCCCcceEEECCEEEECCCCCcCCCCCCchhcCCccCC
Confidence 332 2222 35788888999997543 34554 55 578999999999999998873 32
Q ss_pred CCceeeCCCCcccccCcccCCCCCCCceEeccccccc-chhHHHHHHHHHHHHHcCCC
Q 044575 298 KGIVVVDDDRVGPLYEHTFPPSLAPSLSFVGIPRKLI-GFPFFESQAKWIAQLLSGKR 354 (454)
Q Consensus 298 ~g~i~v~~~~~~~~~~~~~~~~~~p~l~~iG~~~~~~-~~~~a~~qa~~~a~~i~g~~ 354 (454)
+|.+.+|++.+ ++.|++|++||+...+ ..+.|..||+.+|.++.|+.
T Consensus 296 ~G~i~vd~~~~----------t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~g~~ 343 (470)
T 1dxl_A 296 LGRILVNERFS----------TNVSGVYAIGDVIPGPMLAHKAEEDGVACVEYLAGKV 343 (470)
T ss_dssp SSCBCCCTTCB----------CSSTTEEECSTTSSSCCCHHHHHHHHHHHHHHHTTSC
T ss_pred CCCEeECcCCc----------cCCCCEEEEeccCCCCccHHHHHHHHHHHHHHHcCCC
Confidence 24455554433 4579999999998654 35789999999999999863
No 38
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=2.7e-33 Score=281.92 Aligned_cols=299 Identities=18% Similarity=0.186 Sum_probs=201.1
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCc-cc-cccccceecCCccccccCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEV-HS-SVYASLRLTSPREIMGYTDFPFVLK 89 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (454)
++||+|||||+||+++|..|++.|++|+|||++ .+||.|.+.+|.|++.+ .. ..+..++ ........+.....
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~~~~g~~p~k~l~~~~~~~~~~~-~~~~~g~~~~~~~~--- 77 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCLNVGCIPSKALISASHRYEQAK-HSEEMGIKAENVTI--- 77 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHTSHHHHHHHHHHHHHHHHHH-TCGGGTEECCSCEE---
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcCcCcCchhhHHHHHHHHHHHHHH-HHHhcCcccCCCcc---
Confidence 379999999999999999999999999999997 89999998877665411 00 0111111 00000000000000
Q ss_pred CCCCCCCC-CCHH----HHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeC
Q 044575 90 KGRDVRRF-PGHK----ELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFD 164 (454)
Q Consensus 90 ~~~~~~~~-~~~~----~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d 164 (454)
+...+ .... .+..++.+.+++.++. +..++.+. ++. . .+.|+..++ ..++.||
T Consensus 78 ---~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~--~~~g~~~~-id~---~---------~v~V~~~~G----~~~i~~d 135 (455)
T 1ebd_A 78 ---DFAKVQEWKASVVKKLTGGVEGLLKGNKVE--IVKGEAYF-VDA---N---------TVRVVNGDS----AQTYTFK 135 (455)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHTTTCE--EEESEEEE-EET---T---------EEEEEETTE----EEEEECS
T ss_pred ---CHHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEEEEEEE-ccC---C---------eEEEEeCCC----cEEEEeC
Confidence 00000 0011 1334445566666666 66676543 431 1 667765433 1368999
Q ss_pred EEEEccCCCCCCCCCCCCCcCCccceeEEeecCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCcCccc
Q 044575 165 AVVVATGHYSYPRLPSIKGMDKWKRKQMHSHIYRVPEPFRNEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNISEGL 244 (454)
Q Consensus 165 ~vViAtG~~~~p~~p~i~G~~~~~~~~~~~~~~~~~~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~~~~~ 244 (454)
+||+||| +.|..|+++|.+. .+.++.+...... .+++|+|||+|.+|+|+|..+++.|.+|+++++.+.+.+.+
T Consensus 136 ~lViATG--s~p~~~~~~g~~~---~v~~~~~~~~~~~-~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~ 209 (455)
T 1ebd_A 136 NAIIATG--SRPIELPNFKFSN---RILDSTGALNLGE-VPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILSGF 209 (455)
T ss_dssp EEEECCC--EEECCBTTBCCCS---SEECHHHHHTCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTS
T ss_pred EEEEecC--CCCCCCCCCCccc---eEecHHHHhcccc-CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccccc
Confidence 9999999 8899998888653 2445444332222 46899999999999999999999999999999988875543
Q ss_pred hh--------hhcc-CCCeEEcCceeEEecCC---cEEEe---CCCEEeeceEEEccCcccCCcCC--CC-------CCc
Q 044575 245 SK--------VISK-HNNLHLHPQIDCLREDG---RVTFV---DGCWVTADTILYCTGYSYSFPFL--DT-------KGI 300 (454)
Q Consensus 245 ~~--------~l~~-~~~i~~~~~v~~v~~~~---~v~~~---dG~~i~~D~vI~atG~~~~~~~l--~~-------~g~ 300 (454)
.+ .+.+ .++++.+..|+++..++ .+.+. +++++++|.||+|+|++|+.+++ +. +|.
T Consensus 210 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~ 289 (455)
T 1ebd_A 210 EKQMAAIIKKRLKKKGVEVVTNALAKGAEEREDGVTVTYEANGETKTIDADYVLVTVGRRPNTDELGLEQIGIKMTNRGL 289 (455)
T ss_dssp CHHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCEEESCSSSSTTTTTCCBCTTSC
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEEeCCceeEEEcCEEEECcCCCcccCcCChhhcCCccCCCCC
Confidence 22 2222 35788888999987433 24444 45678999999999999998874 32 244
Q ss_pred eeeCCCCcccccCcccCCCCCCCceEeccccccc-chhHHHHHHHHHHHHHcCC
Q 044575 301 VVVDDDRVGPLYEHTFPPSLAPSLSFVGIPRKLI-GFPFFESQAKWIAQLLSGK 353 (454)
Q Consensus 301 i~v~~~~~~~~~~~~~~~~~~p~l~~iG~~~~~~-~~~~a~~qa~~~a~~i~g~ 353 (454)
+.+|++.+ ++.|++|++||+...+ ..+.|..||+.+|.++.|+
T Consensus 290 i~vd~~~~----------t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 333 (455)
T 1ebd_A 290 IEVDQQCR----------TSVPNIFAIGDIVPGPALAHKASYEGKVAAEAIAGH 333 (455)
T ss_dssp BCCCTTCB----------CSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHTSC
T ss_pred EeeCCCcc----------cCCCCEEEEeccCCCcccHHHHHHHHHHHHHHHcCC
Confidence 44444433 4579999999998654 3578999999999999986
No 39
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=100.00 E-value=1.3e-33 Score=285.95 Aligned_cols=303 Identities=16% Similarity=0.149 Sum_probs=201.5
Q ss_pred cCCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCcc--ccccccceecCCcccccc-CCCCC
Q 044575 10 AQSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVH--SSVYASLRLTSPREIMGY-TDFPF 86 (454)
Q Consensus 10 ~~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~ 86 (454)
+..+||+|||||++|+++|..|++.|++|+|||+++.+||+|.+.+|.|++.+. ...+..+........+.+ .+
T Consensus 3 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~~~--- 79 (478)
T 1v59_A 3 NKSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNGD--- 79 (478)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEECSC---
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccCCC---
Confidence 345899999999999999999999999999999999999999988876654110 011111110111000000 00
Q ss_pred CCCCCCCCCCCCCHHHHHH-----------HHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCC
Q 044575 87 VLKKGRDVRRFPGHKELWL-----------YLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKA 155 (454)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~-----------yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~ 155 (454)
......++.. .+...+++.++. +++++.+.. +.. .++|.+.++..
T Consensus 80 ---------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~--~~~g~~~~~----~~~---------~v~V~~~~G~~ 135 (478)
T 1v59_A 80 ---------IKINVANFQKAKDDAVKQLTGGIELLFKKNKVT--YYKGNGSFE----DET---------KIRVTPVDGLE 135 (478)
T ss_dssp ---------EEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCE--EEESEEEES----SSS---------EEEEECCTTCT
T ss_pred ---------CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEEEEEEEc----cCC---------eEEEEecCCCc
Confidence 0012233322 234445556666 677766541 221 56666544310
Q ss_pred Ce---EEEEEeCEEEEccCCCCCCCCCCCCCcCCccceeEEeecCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhhcCeEE
Q 044575 156 DK---VVEEVFDAVVVATGHYSYPRLPSIKGMDKWKRKQMHSHIYRVPEPFRNEVVVVVGNSLSGQDISMELVEVAKEVH 232 (454)
Q Consensus 156 ~~---~~~~~~d~vViAtG~~~~p~~p~i~G~~~~~~~~~~~~~~~~~~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~ 232 (454)
.. ...+.||+||+||| +.|. .+||.+.....+.++.+...... .+++|+|||+|.+|+|+|..|++.|.+|+
T Consensus 136 ~~~~~~~~i~~d~lViAtG--s~p~--~~~g~~~~~~~v~~~~~~~~~~~-~~~~vvViGgG~~g~e~A~~l~~~g~~Vt 210 (478)
T 1v59_A 136 GTVKEDHILDVKNIIVATG--SEVT--PFPGIEIDEEKIVSSTGALSLKE-IPKRLTIIGGGIIGLEMGSVYSRLGSKVT 210 (478)
T ss_dssp TCCSSCEEEEEEEEEECCC--EEEC--CCTTCCCCSSSEECHHHHTTCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEE
T ss_pred ccccccceEEeCEEEECcC--CCCC--CCCCCCCCCceEEcHHHHHhhhc-cCceEEEECCCHHHHHHHHHHHHcCCEEE
Confidence 10 01289999999999 6663 35665422223555554443332 46999999999999999999999999999
Q ss_pred EecccCCcCccchh--------hhcc-CCCeEEcCceeEEec--CC---cEEEe-----CCCEEeeceEEEccCcccCCc
Q 044575 233 LSAKSLNISEGLSK--------VISK-HNNLHLHPQIDCLRE--DG---RVTFV-----DGCWVTADTILYCTGYSYSFP 293 (454)
Q Consensus 233 l~~r~~~~~~~~~~--------~l~~-~~~i~~~~~v~~v~~--~~---~v~~~-----dG~~i~~D~vI~atG~~~~~~ 293 (454)
++++.+.+.+.+.+ .+.+ .++++.+..|+++.. ++ .|.+. +++++++|.||+|+|++|+.+
T Consensus 211 lv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~ 290 (478)
T 1v59_A 211 VVEFQPQIGASMDGEVAKATQKFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYIA 290 (478)
T ss_dssp EECSSSSSSSSSCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCEEECCT
T ss_pred EEEeCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCCCcCCC
Confidence 99999887554332 2222 357888888999875 33 35565 456789999999999999987
Q ss_pred --CCCC-------CCceeeCCCCcccccCcccCCCCCCCceEeccccccc-chhHHHHHHHHHHHHHcCCC
Q 044575 294 --FLDT-------KGIVVVDDDRVGPLYEHTFPPSLAPSLSFVGIPRKLI-GFPFFESQAKWIAQLLSGKR 354 (454)
Q Consensus 294 --~l~~-------~g~i~v~~~~~~~~~~~~~~~~~~p~l~~iG~~~~~~-~~~~a~~qa~~~a~~i~g~~ 354 (454)
++.. +|.|.+|+..+ ++.|++|++||+...+ ..+.|..||+.+|.++.|..
T Consensus 291 ~l~l~~~g~~~~~~G~i~vd~~~~----------t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~~ 351 (478)
T 1v59_A 291 GLGAEKIGLEVDKRGRLVIDDQFN----------SKFPHIKVVGDVTFGPMLAHKAEEEGIAAVEMLKTGH 351 (478)
T ss_dssp TSCTTTTTCCBCTTSCBCCCTTSB----------CSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHHHSC
T ss_pred CCCchhcCceeCCCCCEeECcCCc----------cCCCCEEEeeccCCCcccHHHHHHHHHHHHHHHcCCC
Confidence 5442 34455555433 4579999999998654 45799999999999998753
No 40
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=100.00 E-value=2.8e-33 Score=282.84 Aligned_cols=299 Identities=16% Similarity=0.134 Sum_probs=204.4
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCcc-c-cccccceecCCccccccCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVH-S-SVYASLRLTSPREIMGYTDFPFVLK 89 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (454)
++||+|||||+||++||..|++.|++|+|||+++.+||+|.+.+|.|++.+. . ..+..+..+.+. + +.+..
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~--~---g~~~~-- 74 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFAR--Y---GLMGG-- 74 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHH--H---TEECG--
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHh--c---CcccC--
Confidence 3799999999999999999999999999999998999999988776654110 0 001111000000 0 00000
Q ss_pred CCCCCCCCCCHHHH-----------HHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeE
Q 044575 90 KGRDVRRFPGHKEL-----------WLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKV 158 (454)
Q Consensus 90 ~~~~~~~~~~~~~~-----------~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 158 (454)
........++ ...+..+.++.++. +..++.+ .++. . .++|...++ ..
T Consensus 75 ----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~--~~~g~~~-~i~~---~---------~~~v~~~~G---~~ 132 (468)
T 2qae_A 75 ----EGVTMDSAKMQQQKERAVKGLTGGVEYLFKKNKVT--YYKGEGS-FETA---H---------SIRVNGLDG---KQ 132 (468)
T ss_dssp ----GGCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCE--EEEEEEE-EEET---T---------EEEEEETTS---CE
T ss_pred ----CCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEEEEEE-EeeC---C---------EEEEEecCC---ce
Confidence 0000112222 22345556666776 6666543 3432 1 566665433 22
Q ss_pred EEEEeCEEEEccCCCCCCCCCCCCCcCCccceeEEeecCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccC
Q 044575 159 VEEVFDAVVVATGHYSYPRLPSIKGMDKWKRKQMHSHIYRVPEPFRNEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSL 238 (454)
Q Consensus 159 ~~~~~d~vViAtG~~~~p~~p~i~G~~~~~~~~~~~~~~~~~~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~ 238 (454)
.++.||+||+||| +.|..|+++|.+.. .++++.+...... .+++++|||+|.+|+|+|..+++.|.+|+++++.+
T Consensus 133 ~~~~~d~lviAtG--~~p~~p~~~g~~~~--~v~t~~~~~~~~~-~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 207 (468)
T 2qae_A 133 EMLETKKTIIATG--SEPTELPFLPFDEK--VVLSSTGALALPR-VPKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAP 207 (468)
T ss_dssp EEEEEEEEEECCC--EEECCBTTBCCCSS--SEECHHHHHTCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred EEEEcCEEEECCC--CCcCCCCCCCCCcC--ceechHHHhhccc-CCceEEEECCCHHHHHHHHHHHHhCCEEEEEecCC
Confidence 4789999999999 88999988887541 2445444433222 46899999999999999999999999999999998
Q ss_pred CcCccch--------hhh-cc-CCCeEEcCceeEEecCC---cEEEe--CC--CEEeeceEEEccCcccCCcCCC-----
Q 044575 239 NISEGLS--------KVI-SK-HNNLHLHPQIDCLREDG---RVTFV--DG--CWVTADTILYCTGYSYSFPFLD----- 296 (454)
Q Consensus 239 ~~~~~~~--------~~l-~~-~~~i~~~~~v~~v~~~~---~v~~~--dG--~~i~~D~vI~atG~~~~~~~l~----- 296 (454)
.+.+.++ +.+ .+ .++++.+..|+++..++ .+.+. +| +++++|.||+|+|++|+.+++.
T Consensus 208 ~~l~~~d~~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~g 287 (468)
T 2qae_A 208 RCAPTLDEDVTNALVGALAKNEKMKFMTSTKVVGGTNNGDSVSLEVEGKNGKRETVTCEALLVSVGRRPFTGGLGLDKIN 287 (468)
T ss_dssp SSSTTSCHHHHHHHHHHHHHHTCCEEECSCEEEEEEECSSSEEEEEECC---EEEEEESEEEECSCEEECCTTSCHHHHT
T ss_pred cccccCCHHHHHHHHHHHhhcCCcEEEeCCEEEEEEEcCCeEEEEEEcCCCceEEEECCEEEECCCcccCCCCCCchhcC
Confidence 8754432 234 33 35788888999997543 34555 67 5789999999999999988742
Q ss_pred ----CCCceeeCCCCcccccCcccCCCCCCCceEeccccc-cc-chhHHHHHHHHHHHHHcCCC
Q 044575 297 ----TKGIVVVDDDRVGPLYEHTFPPSLAPSLSFVGIPRK-LI-GFPFFESQAKWIAQLLSGKR 354 (454)
Q Consensus 297 ----~~g~i~v~~~~~~~~~~~~~~~~~~p~l~~iG~~~~-~~-~~~~a~~qa~~~a~~i~g~~ 354 (454)
++|.|.+|++.+ ++.|++|++||+.. .+ ..+.|..||+.+|.++.|+.
T Consensus 288 l~~~~~G~i~vd~~~~----------t~~~~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i~~~~ 341 (468)
T 2qae_A 288 VAKNERGFVKIGDHFE----------TSIPDVYAIGDVVDKGPMLAHKAEDEGVACAEILAGKP 341 (468)
T ss_dssp CCBCTTSCBCCCTTSB----------CSSTTEEECGGGBSSSCSCHHHHHHHHHHHHHHHTTCC
T ss_pred CccCCCCCEeECCCcc----------cCCCCEEEeeccCCCCCccHhHHHHHHHHHHHHHcCCC
Confidence 346677776554 45799999999987 43 45789999999999999863
No 41
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=100.00 E-value=3.7e-33 Score=281.84 Aligned_cols=296 Identities=18% Similarity=0.209 Sum_probs=196.5
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCc-cccccccceecCCccccccCCCCCCCC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEV-HSSVYASLRLTSPREIMGYTDFPFVLK 89 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (454)
..+||+|||||++|+++|..|++.|++|+|||++ .+||+|.+.+|.|++.+ ............|.. .+++.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~----~g~~~--- 74 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG-TIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFD----GGIAA--- 74 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-STTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTT----TTSCC---
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC-CCCccccCCCccchHHHHHHHHHHHHHhhhhhc----CCccC---
Confidence 4589999999999999999999999999999997 79999998888665411 100000000011100 01110
Q ss_pred CCCCCCCCCCHHHHH-------HHHHH--HHHHh----CCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCC
Q 044575 90 KGRDVRRFPGHKELW-------LYLKD--FCQRF----GLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKAD 156 (454)
Q Consensus 90 ~~~~~~~~~~~~~~~-------~yl~~--~~~~~----~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~ 156 (454)
. .......++. +++.. +.+.+ ++. +..+ ++..++.. .++|.+.++
T Consensus 75 ---~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~--~~~g-~~~~~~~~------------~~~v~~~~g--- 132 (467)
T 1zk7_A 75 ---T-VPTIDRSKLLAQQQARVDELRHAKYEGILGGNPAIT--VVHG-EARFKDDQ------------SLTVRLNEG--- 132 (467)
T ss_dssp ---C-CCCCCHHHHHHHHHHHHHHHHHHHTHHHHTTCTTEE--EEEE-EEEEEETT------------EEEEEETTS---
T ss_pred ---C-CCccCHHHHHHHHHHHHHHHhhhhHHHHHhccCCeE--EEEE-EEEEccCC------------EEEEEeCCC---
Confidence 0 0011223332 23321 22222 322 3222 35544421 566665433
Q ss_pred eEEEEEeCEEEEccCCCCCCCCCCCCCcCCccceeEEeecCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEecc
Q 044575 157 KVVEEVFDAVVVATGHYSYPRLPSIKGMDKWKRKQMHSHIYRVPEPFRNEVVVVVGNSLSGQDISMELVEVAKEVHLSAK 236 (454)
Q Consensus 157 ~~~~~~~d~vViAtG~~~~p~~p~i~G~~~~~~~~~~~~~~~~~~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r 236 (454)
...++.||+|||||| +.|+.|++||.+... .+++.+..... ..+++|+|||+|.+|+|+|..+++.+.+|+++++
T Consensus 133 ~~~~~~~d~lviAtG--s~p~~p~i~G~~~~~--~~~~~~~~~~~-~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~ 207 (467)
T 1zk7_A 133 GERVVMFDRCLVATG--ASPAVPPIPGLKESP--YWTSTEALASD-TIPERLAVIGSSVVALELAQAFARLGSKVTVLAR 207 (467)
T ss_dssp SEEEEECSEEEECCC--EEECCCCCTTTTTSC--CBCHHHHHHCS-SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred ceEEEEeCEEEEeCC--CCCCCCCCCCCCcCc--eecHHHHhccc-ccCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEE
Confidence 234789999999999 899999999986532 23333332222 2468999999999999999999999999999999
Q ss_pred cCCcCccchh--------hhc-cCCCeEEcCceeEEecCC---cEEEeCCCEEeeceEEEccCcccCCcCCC--------
Q 044575 237 SLNISEGLSK--------VIS-KHNNLHLHPQIDCLREDG---RVTFVDGCWVTADTILYCTGYSYSFPFLD-------- 296 (454)
Q Consensus 237 ~~~~~~~~~~--------~l~-~~~~i~~~~~v~~v~~~~---~v~~~dG~~i~~D~vI~atG~~~~~~~l~-------- 296 (454)
.+.+.+ +.. .+. ..++++.+..|+++..++ .|.+ ++.++++|.||+|+|+.|+.+++.
T Consensus 208 ~~~~l~-~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~-~~~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~ 285 (467)
T 1zk7_A 208 NTLFFR-EDPAIGEAVTAAFRAEGIEVLEHTQASQVAHMDGEFVLTT-THGELRADKLLVATGRTPNTRSLALDAAGVTV 285 (467)
T ss_dssp SCTTTT-SCHHHHHHHHHHHHHTTCEEETTCCEEEEEEETTEEEEEE-TTEEEEESEEEECSCEEESCTTSCGGGGTCCB
T ss_pred CCccCC-CCHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEE-CCcEEEcCEEEECCCCCcCCCcCCchhcCCcC
Confidence 988754 322 222 235778888999987543 2344 466899999999999999987532
Q ss_pred -CCCceeeCCCCcccccCcccCCCCCCCceEeccccccc-chhHHHHHHHHHHHHHcCC
Q 044575 297 -TKGIVVVDDDRVGPLYEHTFPPSLAPSLSFVGIPRKLI-GFPFFESQAKWIAQLLSGK 353 (454)
Q Consensus 297 -~~g~i~v~~~~~~~~~~~~~~~~~~p~l~~iG~~~~~~-~~~~a~~qa~~~a~~i~g~ 353 (454)
++|.+.+|+... ++.|++|++||+...+ ..+.|..||+.+|.++.|.
T Consensus 286 ~~~G~i~vd~~~~----------t~~~~iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 334 (467)
T 1zk7_A 286 NAQGAIVIDQGMR----------TSNPNIYAAGDCTDQPQFVYVAAAAGTRAAINMTGG 334 (467)
T ss_dssp CTTSCBCCCTTCB----------CSSTTEEECSTTBSSCCCHHHHHHHHHHHHHHHTTC
T ss_pred CCCCCEEECCCcc----------cCCCCEEEEeccCCCcccHHHHHHHHHHHHHHHcCC
Confidence 234555555443 3569999999998754 3578999999999999875
No 42
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=100.00 E-value=9.2e-33 Score=279.31 Aligned_cols=286 Identities=18% Similarity=0.158 Sum_probs=187.0
Q ss_pred CcEEEECcChHHHHHHHHHHHc--CCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCC
Q 044575 13 KNVCVIGAGPSGLVAARELRKE--GHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKK 90 (454)
Q Consensus 13 ~~VvIIGaG~aGl~aA~~l~~~--g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (454)
++|+|||||+||++||..|++. |.+|+|||+++.++. .++.- +.+ ... .++ .
T Consensus 4 ~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~~----~~~gl------~~~------~~g------~~~--~-- 57 (472)
T 3iwa_A 4 KHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISY----GGCGI------PYY------VSG------EVS--N-- 57 (472)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC----------------------------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcccc----ccccc------chh------hcC------CCC--c--
Confidence 6899999999999999999998 899999999887531 11100 000 000 000 0
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEcc
Q 044575 91 GRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVAT 170 (454)
Q Consensus 91 ~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAt 170 (454)
....++...++..+...+.+++++. ++++++|++++... ..+.+.+..++...++.||+|||||
T Consensus 58 --~~~~~~~~~~~~~~~~~~~~~~gi~--~~~~~~V~~id~~~------------~~v~~~~~~~g~~~~~~~d~lviAt 121 (472)
T 3iwa_A 58 --IESLQATPYNVVRDPEFFRINKDVE--ALVETRAHAIDRAA------------HTVEIENLRTGERRTLKYDKLVLAL 121 (472)
T ss_dssp -------------------------CE--EECSEEEEEEETTT------------TEEEEEETTTCCEEEEECSEEEECC
T ss_pred --hHHhccccchhccCHHHHhhhcCcE--EEECCEEEEEECCC------------CEEEEeecCCCCEEEEECCEEEEeC
Confidence 0011111233566777777777877 88899999998653 2344444222334478999999999
Q ss_pred CCCCCCCCCCCCCcCCccceeEEeecCCC-------CCCCCCCeEEEEcCCCCHHHHHHHHhhh-cCeEEEecccCCcCc
Q 044575 171 GHYSYPRLPSIKGMDKWKRKQMHSHIYRV-------PEPFRNEVVVVVGNSLSGQDISMELVEV-AKEVHLSAKSLNISE 242 (454)
Q Consensus 171 G~~~~p~~p~i~G~~~~~~~~~~~~~~~~-------~~~~~~k~vvVVG~G~sg~e~A~~l~~~-~~~V~l~~r~~~~~~ 242 (454)
| +.|..|++||.+. .+ .++.....+ .....+++++|||+|.+|+|+|..+++. +.+|+++.+.+.+.+
T Consensus 122 G--~~p~~p~i~G~~~-~~-v~~~~~~~~~~~l~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~ 197 (472)
T 3iwa_A 122 G--SKANRPPVEGMDL-AG-VTPVTNLDEAEFVQHAISAGEVSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMP 197 (472)
T ss_dssp C--EEECCCSCTTTTS-BT-EEECCSHHHHHHHHHHCCTTSCSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSST
T ss_pred C--CCcCCCCCCCCCC-CC-EEEeCCHHHHHHHHHHhhcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccc
Confidence 9 8999999999863 22 222221110 0112468999999999999999999999 999999999887755
Q ss_pred -cchh--------hhcc-CCCeEEcCceeEEec-CC--cEEEeCCCEEeeceEEEccCcccCCcCC-------CCCCcee
Q 044575 243 -GLSK--------VISK-HNNLHLHPQIDCLRE-DG--RVTFVDGCWVTADTILYCTGYSYSFPFL-------DTKGIVV 302 (454)
Q Consensus 243 -~~~~--------~l~~-~~~i~~~~~v~~v~~-~~--~v~~~dG~~i~~D~vI~atG~~~~~~~l-------~~~g~i~ 302 (454)
.+.. .+.+ .++++.+..|+++.. ++ .|.+.||+++++|.||+|||++|+.+++ +++|.+.
T Consensus 198 ~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~~~g~i~ 277 (472)
T 3iwa_A 198 GFTSKSLSQMLRHDLEKNDVVVHTGEKVVRLEGENGKVARVITDKRTLDADLVILAAGVSPNTQLARDAGLELDPRGAII 277 (472)
T ss_dssp TTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEESSCEEECSEEEECSCEEECCHHHHHHTCCBCTTCCEE
T ss_pred cccCHHHHHHHHHHHHhcCCEEEeCCEEEEEEccCCeEEEEEeCCCEEEcCEEEECCCCCcCHHHHHhCCccCCCCCCEE
Confidence 3322 2222 357888889999976 33 3678899999999999999999998763 3456777
Q ss_pred eCCCCcccccCcccCCCCCCCceEecccccc-----------cchhHHHHHHHHHHHHHcCCC
Q 044575 303 VDDDRVGPLYEHTFPPSLAPSLSFVGIPRKL-----------IGFPFFESQAKWIAQLLSGKR 354 (454)
Q Consensus 303 v~~~~~~~~~~~~~~~~~~p~l~~iG~~~~~-----------~~~~~a~~qa~~~a~~i~g~~ 354 (454)
+|++.+ ++.|++|++||+... ...+.|..||+.+|++|.|+.
T Consensus 278 vd~~~~----------t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~ 330 (472)
T 3iwa_A 278 VDTRMR----------TSDPDIFAGGDCVTIPNLVTGKPGFFPLGSMANRQGRVIGTNLADGD 330 (472)
T ss_dssp CCTTCB----------CSSTTEEECGGGEEEEBTTTSSEECCCCTTHHHHHHHHHHHHHTTCC
T ss_pred ECCCcc----------cCCCCEEEeccceecccccCCceeecchHHHHHHHHHHHHHHhcCCC
Confidence 776554 456999999998731 234689999999999999874
No 43
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=100.00 E-value=2.6e-33 Score=283.43 Aligned_cols=299 Identities=16% Similarity=0.145 Sum_probs=205.4
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccc--cccccceecCCccccccCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHS--SVYASLRLTSPREIMGYTDFPFVLK 89 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (454)
.+||+|||||+||+++|..|++.|++|+|||+++.+||+|.+.+|.|++.+.. ..+..+... .+..+.++.
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~------~~~~~g~~~- 78 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGT------DFASRGIEM- 78 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSS------HHHHTTEEE-
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhh------hHhhCcccc-
Confidence 47999999999999999999999999999999989999999888766541110 001111000 000011100
Q ss_pred CCCCCCCCCCHHHHHHH-----------HHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeE
Q 044575 90 KGRDVRRFPGHKELWLY-----------LKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKV 158 (454)
Q Consensus 90 ~~~~~~~~~~~~~~~~y-----------l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 158 (454)
.. ......++..+ +..+.++.++. +..++. ..++. . .++|.+.++ ..
T Consensus 79 ---~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~--~~~g~~-~~~~~---~---------~~~v~~~~g---g~ 136 (474)
T 1zmd_A 79 ---SE-VRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVV--HVNGYG-KITGK---N---------QVTATKADG---GT 136 (474)
T ss_dssp ---SC-EEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCE--EEESEE-EEEET---T---------EEEEECTTS---CE
T ss_pred ---CC-CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEEEEE-EEecC---C---------EEEEEecCC---Cc
Confidence 00 00122333222 34555566766 666653 33431 1 666665431 12
Q ss_pred EEEEeCEEEEccCCCCCCCCCCCCCcCCccceeEEeecCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccC
Q 044575 159 VEEVFDAVVVATGHYSYPRLPSIKGMDKWKRKQMHSHIYRVPEPFRNEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSL 238 (454)
Q Consensus 159 ~~~~~d~vViAtG~~~~p~~p~i~G~~~~~~~~~~~~~~~~~~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~ 238 (454)
.++.||+||+||| +.|..|+++|.+.. .++++.++..... .+++|+|||+|.+|+|+|..+++.|.+|+++++.+
T Consensus 137 ~~~~~d~lViAtG--s~p~~p~i~g~~~~--~v~t~~~~~~~~~-~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 211 (474)
T 1zmd_A 137 QVIDTKNILIATG--SEVTPFPGITIDED--TIVSSTGALSLKK-VPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLG 211 (474)
T ss_dssp EEEEEEEEEECCC--EEECCCTTCCCCSS--SEECHHHHTTCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred EEEEeCEEEECCC--CCCCCCCCCCCCcC--cEEcHHHHhhccc-cCceEEEECCCHHHHHHHHHHHHcCCEEEEEeccC
Confidence 3689999999999 88999999887542 2556555443333 36899999999999999999999999999999998
Q ss_pred CcCc-cchh--------hhcc-CCCeEEcCceeEEecCC-c-EEE-------eCCCEEeeceEEEccCcccCCcCCC---
Q 044575 239 NISE-GLSK--------VISK-HNNLHLHPQIDCLREDG-R-VTF-------VDGCWVTADTILYCTGYSYSFPFLD--- 296 (454)
Q Consensus 239 ~~~~-~~~~--------~l~~-~~~i~~~~~v~~v~~~~-~-v~~-------~dG~~i~~D~vI~atG~~~~~~~l~--- 296 (454)
.+.+ .+.+ .+.+ .++++.+..|+++..++ . +.+ .+++++++|.||+|+|++|+.++|.
T Consensus 212 ~~l~~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~~~l~l~~ 291 (474)
T 1zmd_A 212 HVGGVGIDMEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEE 291 (474)
T ss_dssp SSSCSSCCHHHHHHHHHHHHHTTCEEECSEEEEEEEECTTSCEEEEEEETTSCCCEEEEESEEEECSCEEECCTTSSHHH
T ss_pred ccCCcccCHHHHHHHHHHHHHCCCEEEeCceEEEEEEcCCceEEEEEEecCCCCceEEEcCEEEECcCCCcCCCcCCchh
Confidence 8765 4332 2222 35788888999987543 2 433 2556799999999999999988732
Q ss_pred ------CCCceeeCCCCcccccCcccCCCCCCCceEeccccccc-chhHHHHHHHHHHHHHcCCC
Q 044575 297 ------TKGIVVVDDDRVGPLYEHTFPPSLAPSLSFVGIPRKLI-GFPFFESQAKWIAQLLSGKR 354 (454)
Q Consensus 297 ------~~g~i~v~~~~~~~~~~~~~~~~~~p~l~~iG~~~~~~-~~~~a~~qa~~~a~~i~g~~ 354 (454)
++|.|.+|++.+ ++.|++|++||+...+ ..+.|..||+.+|.++.|+.
T Consensus 292 ~g~~~~~~G~i~vd~~~~----------t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~~ 346 (474)
T 1zmd_A 292 LGIELDPRGRIPVNTRFQ----------TKIPNIYAIGDVVAGPMLAHKAEDEGIICVEGMAGGA 346 (474)
T ss_dssp HTCCCCTTSCCCCCTTCB----------CSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHTTCC
T ss_pred cCCccCCCCCEEECcCCc----------cCCCCEEEeeecCCCCccHHHHHHHHHHHHHHhcCCC
Confidence 245566666544 4579999999998654 45799999999999999863
No 44
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=100.00 E-value=3.3e-33 Score=284.02 Aligned_cols=299 Identities=18% Similarity=0.175 Sum_probs=195.0
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeC--------CCCCcccccCCCCCCCCcc-cc-ccccceecCCcccccc
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQN--------HDVGGQWLYDPNTDQTEVH-SS-VYASLRLTSPREIMGY 81 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~--------~~~GG~w~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~ 81 (454)
.|||+||||||||++||..+++.|.+|+|||+. ..+||+|.+.+|+|+|.+. +. .+...+.+.......+
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~~Gi~~ 121 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYGWKF 121 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGGGTEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHhcCccc
Confidence 489999999999999999999999999999964 3589999999999987221 11 1111111111000000
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-----------HhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEE
Q 044575 82 TDFPFVLKKGRDVRRFPGHKELWLYLKDFCQ-----------RFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKS 150 (454)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~-----------~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~ 150 (454)
.... ....++.++.++..+ +.++. .+.....-++.. ...|..
T Consensus 122 ~~~~------------~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~---~i~G~a~f~~~~------------~v~V~~ 174 (542)
T 4b1b_A 122 DNLK------------HDWKKLVTTVQSHIRSLNFSYMTGLRSSKVK---YINGLAKLKDKN------------TVSYYL 174 (542)
T ss_dssp EEEE------------ECHHHHHHHHHHHHHHHHHHHHHHHHHTTCE---EECEEEEEEETT------------EEEEEE
T ss_pred Cccc------------ccHHHHHHHHHHHHHHHHHHHHHHHHhCCCE---EEeeeEEEcCCC------------cceEee
Confidence 0000 123444444443332 22332 222222222211 333333
Q ss_pred eecCCCeEEEEEeCEEEEccCCCCCCCCCCCCCcCCccceeEEeecCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhhcCe
Q 044575 151 KEKKADKVVEEVFDAVVVATGHYSYPRLPSIKGMDKWKRKQMHSHIYRVPEPFRNEVVVVVGNSLSGQDISMELVEVAKE 230 (454)
Q Consensus 151 ~~~~~~~~~~~~~d~vViAtG~~~~p~~p~i~G~~~~~~~~~~~~~~~~~~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~ 230 (454)
.+. .....++++|++||||| ++|.+|+.++... ...+.+........ .+++++|||||++|+|+|..++++|.+
T Consensus 175 ~~~-~~~~~~i~a~~iiIATG--s~P~~P~~~~~~~--~~~~ts~~~l~l~~-lP~~lvIIGgG~IGlE~A~~~~~lG~~ 248 (542)
T 4b1b_A 175 KGD-LSKEETVTGKYILIATG--CRPHIPDDVEGAK--ELSITSDDIFSLKK-DPGKTLVVGASYVALECSGFLNSLGYD 248 (542)
T ss_dssp C---CCCEEEEEEEEEEECCC--EEECCCSSSBTHH--HHCBCHHHHTTCSS-CCCSEEEECCSHHHHHHHHHHHHHTCC
T ss_pred ccc-CCceEEEeeeeEEeccC--CCCCCCCcccCCC--ccccCchhhhcccc-CCceEEEECCCHHHHHHHHHHHhcCCe
Confidence 321 13355789999999999 9999986443321 12334444333333 348999999999999999999999999
Q ss_pred EEEecccCCcCccchhh--------hc-cCCCeEEcCceeEEecCC---cEEEeCCCEEeeceEEEccCcccCCcCCCC-
Q 044575 231 VHLSAKSLNISEGLSKV--------IS-KHNNLHLHPQIDCLREDG---RVTFVDGCWVTADTILYCTGYSYSFPFLDT- 297 (454)
Q Consensus 231 V~l~~r~~~~~~~~~~~--------l~-~~~~i~~~~~v~~v~~~~---~v~~~dG~~i~~D~vI~atG~~~~~~~l~~- 297 (454)
||++.|.. +++.+++. +. +...++.+..++++...+ .|.+.+++++++|.|++|+|++||++.|.-
T Consensus 249 VTii~~~~-~L~~~D~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~D~vLvAvGR~Pnt~~L~le 327 (542)
T 4b1b_A 249 VTVAVRSI-VLRGFDQQCAVKVKLYMEEQGVMFKNGILPKKLTKMDDKILVEFSDKTSELYDTVLYAIGRKGDIDGLNLE 327 (542)
T ss_dssp EEEEESSC-SSTTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEESCGGGCGG
T ss_pred EEEecccc-cccccchhHHHHHHHHHHhhcceeecceEEEEEEecCCeEEEEEcCCCeEEEEEEEEcccccCCccccCcc
Confidence 99998754 44443332 22 234778888888886433 466778889999999999999999987651
Q ss_pred --------CCc-eeeCCCCcccccCcccCCCCCCCceEecccccc-c-chhHHHHHHHHHHHHHcCCC
Q 044575 298 --------KGI-VVVDDDRVGPLYEHTFPPSLAPSLSFVGIPRKL-I-GFPFFESQAKWIAQLLSGKR 354 (454)
Q Consensus 298 --------~g~-i~v~~~~~~~~~~~~~~~~~~p~l~~iG~~~~~-~-~~~~a~~qa~~~a~~i~g~~ 354 (454)
.+. +.+|+.++ ++.|++|++||+... + ..+.|..|++.++.++.|..
T Consensus 328 ~~gv~~~~~~~~i~vd~~~~----------Ts~p~IyAiGDv~~~~p~La~~A~~eg~~aa~~i~g~~ 385 (542)
T 4b1b_A 328 SLNMNVNKSNNKIIADHLSC----------TNIPSIFAVGDVAENVPELAPVAIKAGEILARRLFKDS 385 (542)
T ss_dssp GTTCCEETTTTEECCCTTSB----------CSSTTEEECTTSBTTCCCCHHHHHHHHHHHHHHHHSCC
T ss_pred cceeeecccCceEecccccc----------ccCCCeEEeccccCCchhHHHHHHHHHHHHHHHHhcCC
Confidence 122 23344443 567999999999854 3 34899999999999998864
No 45
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=100.00 E-value=2.3e-32 Score=274.57 Aligned_cols=275 Identities=19% Similarity=0.254 Sum_probs=193.9
Q ss_pred CCcEEEECcChHHHHHHHHHHHc--CCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKE--GHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLK 89 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~--g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (454)
.+||+|||||+||+++|..|++. +.+|+|||+++.+++.... .|. .
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~~--------------------~p~----------~-- 50 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPCG--------------------IPY----------V-- 50 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC-----------------------------------------
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCcC--------------------Ccc----------c--
Confidence 37999999999999999999998 7899999998865422100 000 0
Q ss_pred CCCCCCCCCCHHHHHHH-HHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEE
Q 044575 90 KGRDVRRFPGHKELWLY-LKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVV 168 (454)
Q Consensus 90 ~~~~~~~~~~~~~~~~y-l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVi 168 (454)
.......+++..+ .+.+.+++++. ++++++|.+++.. .++|.+.++ ..++.||+|||
T Consensus 51 ----~~~~~~~~~~~~~~~~~~~~~~gi~--v~~~~~v~~i~~~------------~~~v~~~~g----~~~~~~d~lvi 108 (449)
T 3kd9_A 51 ----VEGLSTPDKLMYYPPEVFIKKRGID--LHLNAEVIEVDTG------------YVRVRENGG----EKSYEWDYLVF 108 (449)
T ss_dssp -------------------CTHHHHTTCE--EETTCEEEEECSS------------EEEEECSSS----EEEEECSEEEE
T ss_pred ----cCCCCCHHHhhhcCHHHHHHhcCcE--EEecCEEEEEecC------------CCEEEECCc----eEEEEcCEEEE
Confidence 0000111223332 23455677887 8899999998654 566755332 23689999999
Q ss_pred ccCCCCCCCCCCCCCcCCccceeEEeecC-------CCCCCCCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCcC
Q 044575 169 ATGHYSYPRLPSIKGMDKWKRKQMHSHIY-------RVPEPFRNEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNIS 241 (454)
Q Consensus 169 AtG~~~~p~~p~i~G~~~~~~~~~~~~~~-------~~~~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~~ 241 (454)
||| +.|+.|++||.+... ++..... ..+..+.+++|+|||+|.+|+|+|..+++.|.+|++++|.+++.
T Consensus 109 AtG--~~p~~p~i~G~~~~~--v~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l 184 (449)
T 3kd9_A 109 ANG--ASPQVPAIEGVNLKG--VFTADLPPDALAIREYMEKYKVENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVL 184 (449)
T ss_dssp CCC--EEECCCSCBTTTSTT--EECSCSTHHHHHHHHHHSSSCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTT
T ss_pred CCC--CCCCCCCCCCCCCCC--EEEeCCHHHHHHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccc
Confidence 999 899999999976421 1111111 01123467899999999999999999999999999999998875
Q ss_pred cc-ch--------hhhccCCCeEEcCceeEEecCC--cEEEeCCCEEeeceEEEccCcccCCcCCC-------CCCceee
Q 044575 242 EG-LS--------KVISKHNNLHLHPQIDCLREDG--RVTFVDGCWVTADTILYCTGYSYSFPFLD-------TKGIVVV 303 (454)
Q Consensus 242 ~~-~~--------~~l~~~~~i~~~~~v~~v~~~~--~v~~~dG~~i~~D~vI~atG~~~~~~~l~-------~~g~i~v 303 (454)
+. +. +.+.+.++++.+..+.++..++ ..++.+|+++++|.||+|||++|+.+++. ++|.+.+
T Consensus 185 ~~~~~~~~~~~l~~~l~~~v~i~~~~~v~~i~~~~~v~~v~~~g~~i~~D~Vv~a~G~~p~~~l~~~~gl~~~~~G~i~v 264 (449)
T 3kd9_A 185 RRSFDKEVTDILEEKLKKHVNLRLQEITMKIEGEERVEKVVTDAGEYKAELVILATGIKPNIELAKQLGVRIGETGAIWT 264 (449)
T ss_dssp TTTSCHHHHHHHHHHHTTTSEEEESCCEEEEECSSSCCEEEETTEEEECSEEEECSCEEECCHHHHHTTCCBCTTSSBCC
T ss_pred hhhcCHHHHHHHHHHHHhCcEEEeCCeEEEEeccCcEEEEEeCCCEEECCEEEEeeCCccCHHHHHhCCccCCCCCCEEE
Confidence 44 32 2333447788889999997654 24577888999999999999999987643 3455666
Q ss_pred CCCCcccccCcccCCCCCCCceEecccccc-----------cchhHHHHHHHHHHHHHcCCC
Q 044575 304 DDDRVGPLYEHTFPPSLAPSLSFVGIPRKL-----------IGFPFFESQAKWIAQLLSGKR 354 (454)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~p~l~~iG~~~~~-----------~~~~~a~~qa~~~a~~i~g~~ 354 (454)
|+..+ ++.|++|++||+... ...+.|..||+.+|+++.|+.
T Consensus 265 d~~~~----------t~~~~IyA~GD~~~~~~~~~g~~~~~~l~~~A~~~g~~aa~~i~g~~ 316 (449)
T 3kd9_A 265 NEKMQ----------TSVENVYAAGDVAETRHVITGRRVWVPLAPAGNKMGYVAGSNIAGKE 316 (449)
T ss_dssp CTTCB----------CSSTTEEECSTTBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHTTCC
T ss_pred CCCCc----------cCCCCEEEeeeeeeeccccCCceEEeccHHHHHHHHHHHHHHhcCCC
Confidence 66544 457999999999731 234789999999999999874
No 46
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.7e-33 Score=283.44 Aligned_cols=300 Identities=16% Similarity=0.208 Sum_probs=199.3
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCc-cccc-cccceecCCccccccCCCCCCC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEV-HSSV-YASLRLTSPREIMGYTDFPFVL 88 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~ 88 (454)
..+||+|||||+||+++|..|++.|.+|+|||++ .+||+|.+.+|.|++.+ .+.. +..++ +. ..+.+..
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~n~gciP~k~l~~~~~~~~~~~-~~-------~~~g~~~ 80 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVEAK-ALGGTCVNVGCVPKKVMWYASDLATRVS-HA-------NEYGLYQ 80 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHT-TT-------TTTTBST
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCC-CcCCcCcccCcHHHHHHHHHHHHHHHHH-hH-------HhcCccc
Confidence 4589999999999999999999999999999997 79999998887765411 0000 00010 00 0111100
Q ss_pred CCCCCC-CCCCCHHHHHHHHH-----------HHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCC
Q 044575 89 KKGRDV-RRFPGHKELWLYLK-----------DFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKAD 156 (454)
Q Consensus 89 ~~~~~~-~~~~~~~~~~~yl~-----------~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~ 156 (454)
...... .......++.++.+ ...++.++. +..+ ++..+ +.. .+.|...++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~--~~~g-~~~~i---~~~---------~~~v~~~~g--- 142 (479)
T 2hqm_A 81 NLPLDKEHLTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVD--VVFG-WARFN---KDG---------NVEVQKRDN--- 142 (479)
T ss_dssp TSCCSGGGCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEE--EEEE-EEEEC---TTS---------CEEEEESSS---
T ss_pred ccccccccCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEEe-EEEEe---eCC---------EEEEEeCCC---
Confidence 000000 01122334433332 233344443 3333 34433 211 556655432
Q ss_pred eEEEEEeCEEEEccCCCCCCCCC-CCCCcCCccceeEEeecCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEec
Q 044575 157 KVVEEVFDAVVVATGHYSYPRLP-SIKGMDKWKRKQMHSHIYRVPEPFRNEVVVVVGNSLSGQDISMELVEVAKEVHLSA 235 (454)
Q Consensus 157 ~~~~~~~d~vViAtG~~~~p~~p-~i~G~~~~~~~~~~~~~~~~~~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~ 235 (454)
...++.||+|||||| +.|..| ++||.+. .+++..+.... ..+++++|||+|.+|+|+|..+++.|.+|++++
T Consensus 143 ~~~~~~~d~lviAtG--s~p~~p~~i~g~~~----~~~~~~~~~l~-~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~ 215 (479)
T 2hqm_A 143 TTEVYSANHILVATG--GKAIFPENIPGFEL----GTDSDGFFRLE-EQPKKVVVVGAGYIGIELAGVFHGLGSETHLVI 215 (479)
T ss_dssp CCEEEEEEEEEECCC--EEECCCTTSTTGGG----SBCHHHHHHCS-SCCSEEEEECSSHHHHHHHHHHHHTTCEEEEEC
T ss_pred cEEEEEeCEEEEcCC--CCCCCCCCCCCccc----ccchHHHhccc-ccCCeEEEECCCHHHHHHHHHHHHcCCceEEEE
Confidence 223688999999999 899999 8998742 23333321111 246899999999999999999999999999999
Q ss_pred ccCCcCccchhh--------hc-cCCCeEEcCceeEEecC--C---cEEEeCC-CEEeeceEEEccCcccCCcC-CC---
Q 044575 236 KSLNISEGLSKV--------IS-KHNNLHLHPQIDCLRED--G---RVTFVDG-CWVTADTILYCTGYSYSFPF-LD--- 296 (454)
Q Consensus 236 r~~~~~~~~~~~--------l~-~~~~i~~~~~v~~v~~~--~---~v~~~dG-~~i~~D~vI~atG~~~~~~~-l~--- 296 (454)
+.+.+.+.+++. +. ..++++.+..|+++..+ + .|.+.|| +++++|.||+|+|++|+..+ +.
T Consensus 216 ~~~~~l~~~d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~~l~l~~~g 295 (479)
T 2hqm_A 216 RGETVLRKFDECIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKSHLGMGSENVG 295 (479)
T ss_dssp SSSSSCTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEEECCCSSGGGGT
T ss_pred eCCccccccCHHHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCCccccChhhcC
Confidence 998875544332 22 23578888999999753 2 4677888 78999999999999999854 33
Q ss_pred ----CCCceeeCCCCcccccCcccCCCCCCCceEecccccc-cchhHHHHHHHHHHHHHcCCC
Q 044575 297 ----TKGIVVVDDDRVGPLYEHTFPPSLAPSLSFVGIPRKL-IGFPFFESQAKWIAQLLSGKR 354 (454)
Q Consensus 297 ----~~g~i~v~~~~~~~~~~~~~~~~~~p~l~~iG~~~~~-~~~~~a~~qa~~~a~~i~g~~ 354 (454)
++|.+.+|+... ++.|++|++||+... ...+.|..||+.+|.++.|..
T Consensus 296 l~~~~~G~i~vd~~~~----------t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~~ 348 (479)
T 2hqm_A 296 IKLNSHDQIIADEYQN----------TNVPNIYSLGDVVGKVELTPVAIAAGRKLSNRLFGPE 348 (479)
T ss_dssp CCBCTTSCBCCCTTCB----------CSSTTEEECGGGTTSSCCHHHHHHHHHHHHHHHHSCG
T ss_pred ceECCCCCEeECCCCc----------cCCCCEEEEEecCCCcccHHHHHHHHHHHHHHhcCCC
Confidence 234555555443 457999999999754 356899999999999998753
No 47
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=100.00 E-value=1.3e-33 Score=277.08 Aligned_cols=265 Identities=11% Similarity=0.168 Sum_probs=187.6
Q ss_pred ccCCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCC
Q 044575 9 CAQSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVL 88 (454)
Q Consensus 9 ~~~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (454)
..++.+|+|||||+||++||..|...+.+|+|||+++.++.. .+ . .++.+ .+.
T Consensus 6 ~~~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~----~~---------~-------l~~~l---~g~---- 58 (385)
T 3klj_A 6 HHKSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYY----RP---------R-------LNEII---AKN---- 58 (385)
T ss_dssp --CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBC----GG---------G-------HHHHH---HSC----
T ss_pred ccCCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCcc----cC---------h-------hhHHH---cCC----
Confidence 346789999999999999999997778999999998865311 00 0 00000 000
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEE
Q 044575 89 KKGRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVV 168 (454)
Q Consensus 89 ~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVi 168 (454)
.+.+++..+..++.+++++. ++++++|++|+.. ..+|++.++. ++.||+|||
T Consensus 59 ---------~~~~~l~~~~~~~~~~~~i~--~~~~~~V~~id~~------------~~~v~~~~g~-----~~~yd~lvl 110 (385)
T 3klj_A 59 ---------KSIDDILIKKNDWYEKNNIK--VITSEFATSIDPN------------NKLVTLKSGE-----KIKYEKLII 110 (385)
T ss_dssp ---------CCGGGTBSSCHHHHHHTTCE--EECSCCEEEEETT------------TTEEEETTSC-----EEECSEEEE
T ss_pred ---------CCHHHccCCCHHHHHHCCCE--EEeCCEEEEEECC------------CCEEEECCCC-----EEECCEEEE
Confidence 01112222334455667877 8899999999865 4467777655 789999999
Q ss_pred ccCCCCCCCCCCCCCcCCccceeEEeecCCCCCCC-----CCCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCcCcc
Q 044575 169 ATGHYSYPRLPSIKGMDKWKRKQMHSHIYRVPEPF-----RNEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNISEG 243 (454)
Q Consensus 169 AtG~~~~p~~p~i~G~~~~~~~~~~~~~~~~~~~~-----~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~~~~ 243 (454)
||| +.|+.|++||.+ .+++.....+.... .+++|+|||+|.+|+|+|..|++.|.+|+++++.+.+.+.
T Consensus 111 AtG--~~p~~p~i~G~~----~v~~~~~~~d~~~l~~~l~~~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~ 184 (385)
T 3klj_A 111 ASG--SIANKIKVPHAD----EIFSLYSYDDALKIKDECKNKGKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLER 184 (385)
T ss_dssp CCC--EEECCCCCTTCS----CEECCSSHHHHHHHHHHHHHHSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTT
T ss_pred ecC--CCcCCCCCCCCC----CeEEeCCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchh
Confidence 999 899999999986 23332222111111 2689999999999999999999999999999999887543
Q ss_pred -ch--------hhhccC-CCeEEcCceeEEecCCcEEEeCCCEEeeceEEEccCcccCCcCCCCCC-----ceeeCCCCc
Q 044575 244 -LS--------KVISKH-NNLHLHPQIDCLREDGRVTFVDGCWVTADTILYCTGYSYSFPFLDTKG-----IVVVDDDRV 308 (454)
Q Consensus 244 -~~--------~~l~~~-~~i~~~~~v~~v~~~~~v~~~dG~~i~~D~vI~atG~~~~~~~l~~~g-----~i~v~~~~~ 308 (454)
+. +.+.+. ++++.+..++++ |+++++|.||+|||++|+++++...| .+.+|+...
T Consensus 185 ~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i----------g~~~~~D~vv~a~G~~p~~~~~~~~gl~~~~gi~vd~~~~ 254 (385)
T 3klj_A 185 QLDRDGGLFLKDKLDRLGIKIYTNSNFEEM----------GDLIRSSCVITAVGVKPNLDFIKDTEIASKRGILVNDHME 254 (385)
T ss_dssp TSCHHHHHHHHHHHHTTTCEEECSCCGGGC----------HHHHHHSEEEECCCEEECCGGGTTSCCCBSSSEEECTTCB
T ss_pred hcCHHHHHHHHHHHHhCCCEEEeCCEEEEc----------CeEEecCeEEECcCcccChhhhhhcCCCcCCCEEECCCcc
Confidence 22 222222 345555555443 66788999999999999998876422 255555443
Q ss_pred ccccCcccCCCCCCCceEeccccc-----ccchhHHHHHHHHHHHHHcCCC
Q 044575 309 GPLYEHTFPPSLAPSLSFVGIPRK-----LIGFPFFESQAKWIAQLLSGKR 354 (454)
Q Consensus 309 ~~~~~~~~~~~~~p~l~~iG~~~~-----~~~~~~a~~qa~~~a~~i~g~~ 354 (454)
++.|++|++||+.. ...++.|..||+.+|++|.|+.
T Consensus 255 ----------t~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~g~~ 295 (385)
T 3klj_A 255 ----------TSIKDIYACGDVAEFYGKNPGLINIANKQGEVAGLNACGED 295 (385)
T ss_dssp ----------CSSTTEEECGGGEEETTBCCCCHHHHHHHHHHHHHHHTTCC
T ss_pred ----------cCCCCEEEEEeeEecCCCcccHHHHHHHHHHHHHHHhcCCC
Confidence 45799999999985 2345789999999999999874
No 48
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=100.00 E-value=1.2e-33 Score=286.63 Aligned_cols=293 Identities=15% Similarity=0.141 Sum_probs=199.1
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCc-cccc-cccceecCCccccccCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEV-HSSV-YASLRLTSPREIMGYTDFPFVLK 89 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 89 (454)
.+||+||||||||++||..|++.|.+|+|||++ .+||+|.+.+|.|++.+ .+.. +... . .+..+.++.
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~-~~GGtc~~~gciPsk~l~~~a~~~~~~-~-------~~~~~g~~~- 77 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGG-AYGTTCARVGCMPSKLLIAAADASYHA-S-------QTDLFGIQV- 77 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESS-CSSCHHHHHSHHHHHHHHHHHHHHHHH-T-------CGGGGTEEC-
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCC-CCCCcccccChhcCHHHHHHHHHHHHH-h-------hhhhcCcCC-
Confidence 489999999999999999999999999999996 59999999999877521 1110 1100 0 011111110
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHhCCC---------ccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEE
Q 044575 90 KGRDVRRFPGHKELWLYLKDFCQRFGLR---------EMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVE 160 (454)
Q Consensus 90 ~~~~~~~~~~~~~~~~yl~~~~~~~~~~---------~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 160 (454)
........++.+++.++.+++... ..-.+..+..-++ .++|.+.++. +
T Consensus 78 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~a~~~~--------------~~~v~~~~~~-----~ 134 (492)
T 3ic9_A 78 ----DRISVNGKAVMKRIQTERDRFVGFVVESVESFDEQDKIRGFAKFLD--------------EHTLQVDDHS-----Q 134 (492)
T ss_dssp ----SEEEECHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGEEESCEEEEE--------------TTEEEETTTE-----E
T ss_pred ----CCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhcCeeEEEEEEEEec--------------CCEEEEcCCc-----E
Confidence 001134566767666655544211 0000011111111 4567665433 7
Q ss_pred EEeCEEEEccCCCCCCCCCCCCCcCCccceeEEeecCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCc
Q 044575 161 EVFDAVVVATGHYSYPRLPSIKGMDKWKRKQMHSHIYRVPEPFRNEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNI 240 (454)
Q Consensus 161 ~~~d~vViAtG~~~~p~~p~i~G~~~~~~~~~~~~~~~~~~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~ 240 (454)
+.||+|||||| +.|..|+++|.. ...++++....... ..+++|+|||+|.+|+|+|..|++.|.+|++++|.+++
T Consensus 135 ~~~d~lViATG--s~p~~p~~~~~~--~~~v~t~~~~~~~~-~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 209 (492)
T 3ic9_A 135 VIAKRIVIATG--SRPNYPEFLAAA--GSRLLTNDNLFELN-DLPKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSV 209 (492)
T ss_dssp EEEEEEEECCC--EECCCCHHHHTT--GGGEECHHHHTTCS-SCCSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCC
T ss_pred EEeCEEEEccC--CCCcCCCCCCcc--CCcEEcHHHHhhhh-hcCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcc
Confidence 89999999999 899998766532 22344444443322 24799999999999999999999999999999999887
Q ss_pred Cccch--------hhhccCCCeEEcCceeEEecCC---cEEEe--CC--CEEeeceEEEccCcccCCcCCC---------
Q 044575 241 SEGLS--------KVISKHNNLHLHPQIDCLREDG---RVTFV--DG--CWVTADTILYCTGYSYSFPFLD--------- 296 (454)
Q Consensus 241 ~~~~~--------~~l~~~~~i~~~~~v~~v~~~~---~v~~~--dG--~~i~~D~vI~atG~~~~~~~l~--------- 296 (454)
.+.+. +.+.+.++++.+..|+++..++ .+.+. +| +++++|.||+|||++|+.++|.
T Consensus 210 l~~~d~~~~~~l~~~l~~~V~i~~~~~v~~i~~~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~p~~~~l~l~~~gl~~~ 289 (492)
T 3ic9_A 210 ANLQDEEMKRYAEKTFNEEFYFDAKARVISTIEKEDAVEVIYFDKSGQKTTESFQYVLAATGRKANVDKLGLENTSIELD 289 (492)
T ss_dssp TTCCCHHHHHHHHHHHHTTSEEETTCEEEEEEECSSSEEEEEECTTCCEEEEEESEEEECSCCEESCSSSCGGGSCCCBC
T ss_pred cccCCHHHHHHHHHHHhhCcEEEECCEEEEEEEcCCEEEEEEEeCCCceEEEECCEEEEeeCCccCCCCCChhhcCCEEC
Confidence 54432 2233336788888899987432 34554 67 5788999999999999998742
Q ss_pred CCCceeeC-CCCcccccCcccCCCCCCCceEecccccccc-hhHHHHHHHHHHHHHcC
Q 044575 297 TKGIVVVD-DDRVGPLYEHTFPPSLAPSLSFVGIPRKLIG-FPFFESQAKWIAQLLSG 352 (454)
Q Consensus 297 ~~g~i~v~-~~~~~~~~~~~~~~~~~p~l~~iG~~~~~~~-~~~a~~qa~~~a~~i~g 352 (454)
++|.+.+| +... ++.|++|++||+...+. .+.|..||+.+|.++.+
T Consensus 290 ~~G~i~vd~~~~~----------t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~ 337 (492)
T 3ic9_A 290 KKNSPLFDELTLQ----------TSVDHIFVAGDANNTLTLLHEAADDGKVAGTNAGA 337 (492)
T ss_dssp TTCCBCCCTTTCB----------CSSTTEEECGGGGTSSCSHHHHHHHHHHHHHHHHH
T ss_pred CCCCEeECccccc----------CCCCCEEEEEecCCCCccHHHHHHHHHHHHHHHcC
Confidence 23445555 3333 45699999999987544 47999999999999987
No 49
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=100.00 E-value=5.5e-33 Score=280.02 Aligned_cols=289 Identities=18% Similarity=0.142 Sum_probs=199.3
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCc-cc-cccccceecCCccccccCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEV-HS-SVYASLRLTSPREIMGYTDFPFVLK 89 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (454)
.+||+|||||+||++||..|++.|.+|+|||+++ +||+|.+.+|.|++.+ .+ ..+..++. +..+.++.
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~~~~g~iP~k~l~~~~~~~~~~~~--------~~~~g~~~- 75 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVCLNVGCIPTKALLHAAETLHHLKV--------AEGFGLKA- 75 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHHH--------HGGGTEEC-
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCCCCcChHHHHHHHHHHHHHHHHHh--------HHhcCCCC-
Confidence 5899999999999999999999999999999987 9999998888765411 00 11111110 00000000
Q ss_pred CCCCCCCCCCHHHH-------HHH----HHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeE
Q 044575 90 KGRDVRRFPGHKEL-------WLY----LKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKV 158 (454)
Q Consensus 90 ~~~~~~~~~~~~~~-------~~y----l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 158 (454)
. ......++ .++ +..+.++.++. +..++.+. ++ .++|++. +.
T Consensus 76 ---~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~--~~~g~~~~-~~--------------~~~v~v~-g~---- 128 (464)
T 2eq6_A 76 ---K--PELDLKKLGGWRDQVVKKLTGGVGTLLKGNGVE--LLRGFARL-VG--------------PKEVEVG-GE---- 128 (464)
T ss_dssp ---C--CEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCE--EEESCEEE-EE--------------TTEEEET-TE----
T ss_pred ---C--CCcCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEeeeEEE-cc--------------CCEEEEc-cE----
Confidence 0 00112222 222 23445556666 55665432 32 2335443 22
Q ss_pred EEEEeCEEEEccCCCCCCCCCC-CCCcCCccceeEEeecCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEeccc
Q 044575 159 VEEVFDAVVVATGHYSYPRLPS-IKGMDKWKRKQMHSHIYRVPEPFRNEVVVVVGNSLSGQDISMELVEVAKEVHLSAKS 237 (454)
Q Consensus 159 ~~~~~d~vViAtG~~~~p~~p~-i~G~~~~~~~~~~~~~~~~~~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~ 237 (454)
++.||+|||||| +.|..|+ +||. ..++++.++.......+++|+|||+|.+|+|+|..|++.|.+|+++++.
T Consensus 129 -~~~~d~lViATG--s~p~~p~gi~~~----~~v~~~~~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~ 201 (464)
T 2eq6_A 129 -RYGAKSLILATG--SEPLELKGFPFG----EDVWDSTRALKVEEGLPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYM 201 (464)
T ss_dssp -EEEEEEEEECCC--EEECCBTTBCCS----SSEECHHHHTCGGGCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred -EEEeCEEEEcCC--CCCCCCCCCCCC----CcEEcHHHHHhhhhhcCCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcC
Confidence 689999999999 8898885 6652 1355555554443334689999999999999999999999999999999
Q ss_pred CCcCccchh--------hhcc-CCCeEEcCceeEEecCC---cEEEe-C--CC--EEeeceEEEccCcccCCcCCC----
Q 044575 238 LNISEGLSK--------VISK-HNNLHLHPQIDCLREDG---RVTFV-D--GC--WVTADTILYCTGYSYSFPFLD---- 296 (454)
Q Consensus 238 ~~~~~~~~~--------~l~~-~~~i~~~~~v~~v~~~~---~v~~~-d--G~--~i~~D~vI~atG~~~~~~~l~---- 296 (454)
+.+.+.+.+ .+.+ .++++.+..|+++..++ .|.+. + |+ ++++|.||+|+|++|+.+++.
T Consensus 202 ~~~l~~~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~ 281 (464)
T 2eq6_A 202 PEILPQGDPETAALLRRALEKEGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTEGLGLEKA 281 (464)
T ss_dssp SSSSTTSCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTCCSCEEEEESEEEECSCEEESCTTSSHHHH
T ss_pred CccccccCHHHHHHHHHHHHhcCCEEEcCCEEEEEEEeCCEEEEEEeecCCCceeEEEcCEEEECCCcccCCCCCChhhc
Confidence 877544332 2222 35788888899887543 35665 7 87 789999999999999988641
Q ss_pred -----CCCceeeCCCCcccccCcccCCCCCCCceEeccccccc-chhHHHHHHHHHHHHHcCCC
Q 044575 297 -----TKGIVVVDDDRVGPLYEHTFPPSLAPSLSFVGIPRKLI-GFPFFESQAKWIAQLLSGKR 354 (454)
Q Consensus 297 -----~~g~i~v~~~~~~~~~~~~~~~~~~p~l~~iG~~~~~~-~~~~a~~qa~~~a~~i~g~~ 354 (454)
++|.+.+|+..+ ++.|++|++||+...+ ..+.|..||+.+|.++.|..
T Consensus 282 g~~~~~~G~i~vd~~~~----------t~~~~Iya~GD~~~~~~l~~~A~~~g~~aa~~i~g~~ 335 (464)
T 2eq6_A 282 GVKVDERGFIRVNARME----------TSVPGVYAIGDAARPPLLAHKAMREGLIAAENAAGKD 335 (464)
T ss_dssp TCCBCTTSCBCCCTTCB----------CSSTTEEECGGGTCSSCCHHHHHHHHHHHHHHHTTCC
T ss_pred CceecCCCCEEECCCcc----------cCCCCEEEEeccCCCcccHHHHHHHHHHHHHHhcCCC
Confidence 345566666544 4579999999998654 35789999999999999864
No 50
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=100.00 E-value=8e-33 Score=286.18 Aligned_cols=282 Identities=17% Similarity=0.195 Sum_probs=200.5
Q ss_pred CcEEEECcChHHHHHHHHHHHc--CCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCC
Q 044575 13 KNVCVIGAGPSGLVAARELRKE--GHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKK 90 (454)
Q Consensus 13 ~~VvIIGaG~aGl~aA~~l~~~--g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (454)
++|+|||||+||++||..|++. +.+|+|||+++.++... + .+ |. ...+
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~~----~------------~l----~~---~~~~------- 51 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFAN----C------------GL----PY---HISG------- 51 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCG----G------------GH----HH---HHTS-------
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCccccc----c------------Cc----hH---HhcC-------
Confidence 5899999999999999999998 78999999988664110 0 00 00 0000
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEcc
Q 044575 91 GRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVAT 170 (454)
Q Consensus 91 ~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAt 170 (454)
...+....+.+++..+.+++++. ++++++|++|+.... . +++.+..++...++.||+|||||
T Consensus 52 ----~~~~~~~~~~~~~~~~~~~~~i~--~~~~~~V~~id~~~~----------~--v~~~~~~~g~~~~~~~d~lviAt 113 (565)
T 3ntd_A 52 ----EIAQRSALVLQTPESFKARFNVE--VRVKHEVVAIDRAAK----------L--VTVRRLLDGSEYQESYDTLLLSP 113 (565)
T ss_dssp ----SSCCGGGGBCCCHHHHHHHHCCE--EETTEEEEEEETTTT----------E--EEEEETTTCCEEEEECSEEEECC
T ss_pred ----CcCChHHhhccCHHHHHHhcCcE--EEECCEEEEEECCCC----------E--EEEEecCCCCeEEEECCEEEECC
Confidence 00011233445667777888887 889999999986532 3 44443222334478999999999
Q ss_pred CCCCCCCCCCCCCcCCccceeEEeecCCCC-----CCCCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCcCccch
Q 044575 171 GHYSYPRLPSIKGMDKWKRKQMHSHIYRVP-----EPFRNEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNISEGLS 245 (454)
Q Consensus 171 G~~~~p~~p~i~G~~~~~~~~~~~~~~~~~-----~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~~~~~~ 245 (454)
| +.|+.|++||.+.......++...... ....+++|+|||+|.+|+|+|..+++.|.+|++++|.+.+.+.+.
T Consensus 114 G--~~p~~p~ipG~~~~~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~ 191 (565)
T 3ntd_A 114 G--AAPIVPPIPGVDNPLTHSLRNIPDMDRILQTIQMNNVEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMTPVD 191 (565)
T ss_dssp C--EEECCCCCTTCCSTTEECCSSHHHHHHHHHHHHHTTCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCTTSC
T ss_pred C--CCCCCCCCCCCCCCCEEEeCCHHHHHHHHHHHhhCCCCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccchhcC
Confidence 9 899999999986433211111100000 113568999999999999999999999999999999988755433
Q ss_pred hh--------hc-cCCCeEEcCceeEEec--------------------CC--cEEEeCCCEEeeceEEEccCcccCCcC
Q 044575 246 KV--------IS-KHNNLHLHPQIDCLRE--------------------DG--RVTFVDGCWVTADTILYCTGYSYSFPF 294 (454)
Q Consensus 246 ~~--------l~-~~~~i~~~~~v~~v~~--------------------~~--~v~~~dG~~i~~D~vI~atG~~~~~~~ 294 (454)
+. +. ..++++.+..|+++.. ++ .+++.+|+++++|.||+|||++|++++
T Consensus 192 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~l 271 (565)
T 3ntd_A 192 REMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIGVRPETQL 271 (565)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSCEEEESEEEECSCEEECCHH
T ss_pred HHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCCCEEEcCEEEECcCCccchHH
Confidence 22 22 2357888889998865 22 467788999999999999999999876
Q ss_pred CC-------CCCceeeCCCCcccccCcccCCCCCCCceEecccccc-----------cchhHHHHHHHHHHHHHcCCC
Q 044575 295 LD-------TKGIVVVDDDRVGPLYEHTFPPSLAPSLSFVGIPRKL-----------IGFPFFESQAKWIAQLLSGKR 354 (454)
Q Consensus 295 l~-------~~g~i~v~~~~~~~~~~~~~~~~~~p~l~~iG~~~~~-----------~~~~~a~~qa~~~a~~i~g~~ 354 (454)
+. ++|.+.+|+..+ ++.|++|++||+... ...+.|..||+.+|++|.|+.
T Consensus 272 ~~~~g~~~~~~g~i~vd~~~~----------t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~ 339 (565)
T 3ntd_A 272 ARDAGLAIGELGGIKVNAMMQ----------TSDPAIYAVGDAVEEQDFVTGQACLVPLAGPANRQGRMAADNMFGRE 339 (565)
T ss_dssp HHHHTCCBCTTSSBCCCTTCB----------CSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTTCC
T ss_pred HHhCCcccCCCCCEEECCCcc----------cCCCCEEEeeeeEeeccccCCceeecccHHHHHHHHHHHHHHhcCCC
Confidence 42 446666666544 457999999998721 235689999999999999874
No 51
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=100.00 E-value=4.6e-33 Score=284.15 Aligned_cols=300 Identities=16% Similarity=0.177 Sum_probs=196.2
Q ss_pred ccCCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC--------CCCcccccCCCCCCCCcccc-ccccceecCCcccc
Q 044575 9 CAQSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH--------DVGGQWLYDPNTDQTEVHSS-VYASLRLTSPREIM 79 (454)
Q Consensus 9 ~~~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~--------~~GG~w~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 79 (454)
|+..+||+||||||||++||..|++.|.+|+|||+++ .+||+|.+.+|.|++.+... .+.. ...
T Consensus 29 ~~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~-------~~~ 101 (519)
T 3qfa_A 29 KSYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQ-------ALQ 101 (519)
T ss_dssp SSCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHH-------HHH
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHH-------HHH
Confidence 4456899999999999999999999999999999964 79999999988876521110 0000 000
Q ss_pred ccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-----------hCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEE
Q 044575 80 GYTDFPFVLKKGRDVRRFPGHKELWLYLKDFCQR-----------FGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVV 148 (454)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~-----------~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v 148 (454)
.+..+.+.. ..........+.++.+.+.++ .++. .+...+..++.. .+.|
T Consensus 102 ~~~~~g~~~----~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~---~i~g~a~~~d~~------------~v~v 162 (519)
T 3qfa_A 102 DSRNYGWKV----EETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVV---YENAYGQFIGPH------------RIKA 162 (519)
T ss_dssp HHHHTTBCC----CSSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCE---EECSEEEEEETT------------EEEE
T ss_pred HHHhcCccc----CCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE---EEEEEEEEeeCC------------EEEE
Confidence 111122211 112234556666666554433 2332 223344444321 4444
Q ss_pred EEeecCCCeEEEEEeCEEEEccCCCCCCCCCCCCCcCCccceeEEeecCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhhc
Q 044575 149 KSKEKKADKVVEEVFDAVVVATGHYSYPRLPSIKGMDKWKRKQMHSHIYRVPEPFRNEVVVVVGNSLSGQDISMELVEVA 228 (454)
Q Consensus 149 ~~~~~~~~~~~~~~~d~vViAtG~~~~p~~p~i~G~~~~~~~~~~~~~~~~~~~~~~k~vvVVG~G~sg~e~A~~l~~~~ 228 (454)
...++ ...++.||+|||||| +.|+.|++||...+ .+++..+.... ...++++|||+|.+|+|+|..+++.|
T Consensus 163 ~~~~g---~~~~i~~d~lViATG--s~p~~p~i~G~~~~---~~t~~~~~~l~-~~~~~vvVIGgG~ig~E~A~~l~~~G 233 (519)
T 3qfa_A 163 TNNKG---KEKIYSAERFLIATG--ERPRYLGIPGDKEY---CISSDDLFSLP-YCPGKTLVVGASYVALECAGFLAGIG 233 (519)
T ss_dssp ECTTC---CCCEEEEEEEEECCC--EEECCCCCTTHHHH---CBCHHHHTTCS-SCCCSEEEECCSHHHHHHHHHHHHTT
T ss_pred EcCCC---CEEEEECCEEEEECC--CCcCCCCCCCccCc---eEcHHHHhhhh-hcCCeEEEECCcHHHHHHHHHHHHcC
Confidence 43322 223689999999999 89999999996542 33443333322 23467999999999999999999999
Q ss_pred CeEEEecccCCcCccchh--------hhcc-CCCeEEcCceeEEec--C---Cc--EEE--eCCC---EEeeceEEEccC
Q 044575 229 KEVHLSAKSLNISEGLSK--------VISK-HNNLHLHPQIDCLRE--D---GR--VTF--VDGC---WVTADTILYCTG 287 (454)
Q Consensus 229 ~~V~l~~r~~~~~~~~~~--------~l~~-~~~i~~~~~v~~v~~--~---~~--v~~--~dG~---~i~~D~vI~atG 287 (454)
.+|+++.|. .+.+.+++ .+.+ .++++.+..++++.. + +. +.+ .+|+ ++++|.||+|+|
T Consensus 234 ~~Vtlv~~~-~~l~~~d~~~~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G 312 (519)
T 3qfa_A 234 LDVTVMVRS-ILLRGFDQDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIG 312 (519)
T ss_dssp CCEEEEESS-CSSTTSCHHHHHHHHHHHHHTTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSC
T ss_pred CeEEEEecc-cccccCCHHHHHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecC
Confidence 999999985 44333322 2222 346777766665542 1 22 322 3553 467999999999
Q ss_pred cccCCcCCC----------CCCceeeCCCCcccccCcccCCCCCCCceEecccc-cc-cchhHHHHHHHHHHHHHcCCC
Q 044575 288 YSYSFPFLD----------TKGIVVVDDDRVGPLYEHTFPPSLAPSLSFVGIPR-KL-IGFPFFESQAKWIAQLLSGKR 354 (454)
Q Consensus 288 ~~~~~~~l~----------~~g~i~v~~~~~~~~~~~~~~~~~~p~l~~iG~~~-~~-~~~~~a~~qa~~~a~~i~g~~ 354 (454)
++|++++|. ++|.+.+|++.+ ++.|+||++||+. .. ...+.|..||+.+|+++.|..
T Consensus 313 ~~p~~~~l~l~~~gl~~~~~~G~I~Vd~~~~----------Ts~~~IyA~GD~~~g~~~~~~~A~~~g~~aa~~i~g~~ 381 (519)
T 3qfa_A 313 RDACTRKIGLETVGVKINEKTGKIPVTDEEQ----------TNVPYIYAIGDILEDKVELTPVAIQAGRLLAQRLYAGS 381 (519)
T ss_dssp EEESCSSSCSTTTTCCCCTTTCCBCCCTTSB----------CSSTTEEECGGGBSSSCCCHHHHHHHHHHHHHHHHSCC
T ss_pred CcccCCCCChhhcCcEEcCCCCeEeeCCCCc----------cCCCCEEEEEeccCCCCccHHHHHHHHHHHHHHHcCCC
Confidence 999988742 134455554433 4579999999998 33 345899999999999998764
No 52
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=100.00 E-value=9.1e-32 Score=270.45 Aligned_cols=276 Identities=17% Similarity=0.192 Sum_probs=192.3
Q ss_pred CcEEEECcChHHHHHHHHHHHc--CCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCC
Q 044575 13 KNVCVIGAGPSGLVAARELRKE--GHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKK 90 (454)
Q Consensus 13 ~~VvIIGaG~aGl~aA~~l~~~--g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (454)
+||+|||||+||++||..|++. |.+|+|||+++.+|... +.. ..+. ..
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~----~~~------~~~~------~~-------------- 52 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLS----GGL------SAYF------NH-------------- 52 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCC----C----------------------------------
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccC----ccc------hhhh------cC--------------
Confidence 5899999999999999999998 89999999998776211 000 0000 00
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEcc
Q 044575 91 GRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVAT 170 (454)
Q Consensus 91 ~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAt 170 (454)
.+...+++..+..+...++++. ++++++|++++.... .+.+... ....++.||+|||||
T Consensus 53 -----~~~~~~~~~~~~~~~~~~~gi~--~~~~~~V~~id~~~~----------~v~v~~~----~~~~~~~~d~lviAt 111 (452)
T 3oc4_A 53 -----TINELHEARYITEEELRRQKIQ--LLLNREVVAMDVENQ----------LIAWTRK----EEQQWYSYDKLILAT 111 (452)
T ss_dssp -------------CCCCHHHHHHTTEE--EECSCEEEEEETTTT----------EEEEEET----TEEEEEECSEEEECC
T ss_pred -----CCCCHHHhhcCCHHHHHHCCCE--EEECCEEEEEECCCC----------EEEEEec----CceEEEEcCEEEECC
Confidence 0000011111123344556765 778999999986532 4555411 123478999999999
Q ss_pred CCCCCCCCCCCCCcCCccceeEEeecCCCCCC-----CCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCcCcc-c
Q 044575 171 GHYSYPRLPSIKGMDKWKRKQMHSHIYRVPEP-----FRNEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNISEG-L 244 (454)
Q Consensus 171 G~~~~p~~p~i~G~~~~~~~~~~~~~~~~~~~-----~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~~~~-~ 244 (454)
| +.|..|++||.+. ..+++...+..... ..+++++|||+|.+|+|+|..+++.|.+|+++.+.+.+.+. +
T Consensus 112 G--~~p~~p~i~g~~~--~~v~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~ 187 (452)
T 3oc4_A 112 G--ASQFSTQIRGSQT--EKLLKYKFLSGALAAVPLLENSQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPKYF 187 (452)
T ss_dssp C--CCBCCCCCBTTTC--TTEEEGGGCC----CCHHHHTCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTC
T ss_pred C--cccCCCCCCCCCC--CCEEEeCCHHHHHHHHHHHhcCCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccccccC
Confidence 9 8999999999864 22444444333222 25689999999999999999999999999999999887543 2
Q ss_pred h--------hhhccC-CCeEEcCceeEEec-CCc--EEEeCCCEEeeceEEEccCcccCCcCCCC------CCceeeCCC
Q 044575 245 S--------KVISKH-NNLHLHPQIDCLRE-DGR--VTFVDGCWVTADTILYCTGYSYSFPFLDT------KGIVVVDDD 306 (454)
Q Consensus 245 ~--------~~l~~~-~~i~~~~~v~~v~~-~~~--v~~~dG~~i~~D~vI~atG~~~~~~~l~~------~g~i~v~~~ 306 (454)
+ +.+.+. ++++.++.|+++.. ++. |.+.+| ++++|.||+|||++|+.+++.. +|.+.+|++
T Consensus 188 d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g-~i~aD~Vv~A~G~~p~~~~l~~~~~~~~~g~i~vd~~ 266 (452)
T 3oc4_A 188 DKEMVAEVQKSLEKQAVIFHFEETVLGIEETANGIVLETSEQ-EISCDSGIFALNLHPQLAYLDKKIQRNLDQTIAVDAY 266 (452)
T ss_dssp CHHHHHHHHHHHHTTTEEEEETCCEEEEEECSSCEEEEESSC-EEEESEEEECSCCBCCCSSCCTTSCBCTTSCBCCCTT
T ss_pred CHHHHHHHHHHHHHcCCEEEeCCEEEEEEccCCeEEEEECCC-EEEeCEEEECcCCCCChHHHHhhhccCCCCCEEECcC
Confidence 2 223333 47888899999973 333 555555 8999999999999999988653 344455544
Q ss_pred CcccccCcccCCCCCCCceEeccccccc-----------chhHHHHHHHHHHHHHcCCC
Q 044575 307 RVGPLYEHTFPPSLAPSLSFVGIPRKLI-----------GFPFFESQAKWIAQLLSGKR 354 (454)
Q Consensus 307 ~~~~~~~~~~~~~~~p~l~~iG~~~~~~-----------~~~~a~~qa~~~a~~i~g~~ 354 (454)
.+ ++.|++|++||+...+ ..+.|..||+.+|.++.|..
T Consensus 267 ~~----------t~~~~IyA~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g~~ 315 (452)
T 3oc4_A 267 LQ----------TSVPNVFAIGDCISVMNEPVAETFYAPLVNNAVRTGLVVANNLEEKT 315 (452)
T ss_dssp CB----------CSSTTEEECGGGBCEEEGGGTEEECCCCHHHHHHHHHHHTTSSSSCC
T ss_pred cc----------CCCCCEEEEEeeEEeccccCCceeecchHHHHHHHHHHHHHHhcCCC
Confidence 33 4579999999998642 45789999999999998864
No 53
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=100.00 E-value=4.5e-33 Score=280.99 Aligned_cols=292 Identities=16% Similarity=0.160 Sum_probs=201.6
Q ss_pred CcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCc-c-ccccccceecCCccccccCCCCCCCCC
Q 044575 13 KNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEV-H-SSVYASLRLTSPREIMGYTDFPFVLKK 90 (454)
Q Consensus 13 ~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (454)
+||+|||||+||+++|..|++.|++|+|||++ .+||.|.+.+|.|++.+ . ...+..+.... ..+.++.
T Consensus 4 ~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~gG~~~~~g~~psk~ll~~~~~~~~~~~~~-------~~~g~~~-- 73 (464)
T 2a8x_A 4 YDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWGGVCLNVGCIPSKALLRNAELVHIFTKDA-------KAFGISG-- 73 (464)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHHT-------TTTTEEE--
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCcccccCchhhHHHHHHHHHHHHHHHHH-------HhcCCCC--
Confidence 79999999999999999999999999999997 79999987776654311 0 00111111000 0010000
Q ss_pred CCCCCCCCCHH-----------HHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEE
Q 044575 91 GRDVRRFPGHK-----------ELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVV 159 (454)
Q Consensus 91 ~~~~~~~~~~~-----------~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 159 (454)
. ...... .+..++.+.+++.++. ++.++.+. + +.. .++|.+.++ ...
T Consensus 74 --~--~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~--~~~g~~~~-i---d~~---------~v~V~~~~G---~~~ 131 (464)
T 2a8x_A 74 --E--VTFDYGIAYDRSRKVAEGRVAGVHFLMKKNKIT--EIHGYGTF-A---DAN---------TLLVDLNDG---GTE 131 (464)
T ss_dssp --C--CEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCE--EECEEEEE-S---SSS---------EEEEEETTS---CCE
T ss_pred --C--CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEEeEEEE-e---cCC---------eEEEEeCCC---ceE
Confidence 0 000111 2333455666666766 66665442 2 222 566665433 113
Q ss_pred EEEeCEEEEccCCCCCCCCCCCCCcCCccceeEEeecCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCC
Q 044575 160 EEVFDAVVVATGHYSYPRLPSIKGMDKWKRKQMHSHIYRVPEPFRNEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLN 239 (454)
Q Consensus 160 ~~~~d~vViAtG~~~~p~~p~i~G~~~~~~~~~~~~~~~~~~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~ 239 (454)
++.||+||+||| +.|..|+++|.+. ...++.+...... .+++|+|||+|.+|+|+|..+++.|.+|+++++.++
T Consensus 132 ~~~~d~lViAtG--~~~~~~~~~g~~~---~~~~~~~~~~~~~-~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 205 (464)
T 2a8x_A 132 SVTFDNAIIATG--SSTRLVPGTSLSA---NVVTYEEQILSRE-LPKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPR 205 (464)
T ss_dssp EEEEEEEEECCC--EEECCCTTCCCBT---TEECHHHHHTCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred EEEcCEEEECCC--CCCCCCCCCCCCc---eEEecHHHhhccc-cCCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCc
Confidence 789999999999 7888888888654 2444444332222 468999999999999999999999999999999988
Q ss_pred cCccchhh--------hc-cCCCeEEcCceeEEecCC---cEEEe-CC--CEEeeceEEEccCcccCCcCCC--------
Q 044575 240 ISEGLSKV--------IS-KHNNLHLHPQIDCLREDG---RVTFV-DG--CWVTADTILYCTGYSYSFPFLD-------- 296 (454)
Q Consensus 240 ~~~~~~~~--------l~-~~~~i~~~~~v~~v~~~~---~v~~~-dG--~~i~~D~vI~atG~~~~~~~l~-------- 296 (454)
+.+.+.+. +. ..++++.+..|+++..++ .+.+. +| +++++|.||+|+|++|+.+++.
T Consensus 206 ~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~ 285 (464)
T 2a8x_A 206 ALPNEDADVSKEIEKQFKKLGVTILTATKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIGFAPNVEGYGLDKAGVAL 285 (464)
T ss_dssp SSTTSCHHHHHHHHHHHHHHTCEEECSCEEEEEEECSSCEEEEEESSSCEEEEEESEEEECSCEEECCSSSCHHHHTCCB
T ss_pred cccccCHHHHHHHHHHHHHcCCEEEeCcEEEEEEEcCCeEEEEEEcCCceEEEEcCEEEECCCCCccCCCCCchhcCCcc
Confidence 76544322 22 235788888999997543 34554 67 5789999999999999988742
Q ss_pred -CCCceeeCCCCcccccCcccCCCCCCCceEeccccccc-chhHHHHHHHHHHHHHcC
Q 044575 297 -TKGIVVVDDDRVGPLYEHTFPPSLAPSLSFVGIPRKLI-GFPFFESQAKWIAQLLSG 352 (454)
Q Consensus 297 -~~g~i~v~~~~~~~~~~~~~~~~~~p~l~~iG~~~~~~-~~~~a~~qa~~~a~~i~g 352 (454)
++|.|.+|++.+ ++.|++|++||+...+ ..+.|..||+.+|.++.|
T Consensus 286 ~~~G~i~vd~~~~----------t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g 333 (464)
T 2a8x_A 286 TDRKAIGVDDYMR----------TNVGHIYAIGDVNGLLQLAHVAEAQGVVAAETIAG 333 (464)
T ss_dssp CTTSSBCCCTTSB----------CSSTTEEECGGGGCSSCSHHHHHHHHHHHHHHHHT
T ss_pred CCCCCEeECcCCc----------cCCCCEEEeECcCCCccCHHHHHHHHHHHHHHhcC
Confidence 346677776554 4579999999998654 357899999999999998
No 54
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=100.00 E-value=4.2e-33 Score=282.25 Aligned_cols=292 Identities=17% Similarity=0.187 Sum_probs=199.3
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCc-cccccccceecCCccccccCCCCCCCC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEV-HSSVYASLRLTSPREIMGYTDFPFVLK 89 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (454)
..+||+|||||+||++||..|++.|++|+|||++ .+||+|.+.+|.|++.+ ....... ....+..+.++.
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~-~~GG~~~~~gc~p~k~l~~~~~~~~-------~~~~~~~~g~~~- 89 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAELGARAAVVESH-KLGGTCVNVGCVPKKVMWNTAVHSE-------FMHDHADYGFPS- 89 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHH-------HHTTTTTTTSCC-
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCcccccCccchHHHHHHHHHHH-------HHHHHHhcCccC-
Confidence 4689999999999999999999999999999975 79999999888766411 1110000 011111222221
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHH-----------hCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeE
Q 044575 90 KGRDVRRFPGHKELWLYLKDFCQR-----------FGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKV 158 (454)
Q Consensus 90 ~~~~~~~~~~~~~~~~yl~~~~~~-----------~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 158 (454)
........++.++.+.+.+. .++. +..+ ++..++ .. .++|.. ++.
T Consensus 90 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~--~~~g-~~~~~~---~~---------~~~v~~-~g~---- 145 (478)
T 3dk9_A 90 ----CEGKFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIE--IIRG-HAAFTS---DP---------KPTIEV-SGK---- 145 (478)
T ss_dssp ----CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCE--EEES-CEEECS---CS---------SCEEEE-TTE----
T ss_pred ----CCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcE--EEEe-EEEEee---CC---------eEEEEE-CCE----
Confidence 11223445555554444432 3333 2222 222221 11 456663 222
Q ss_pred EEEEeCEEEEccCCCCCCCCC---CCCCcCCccceeEEeecCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEec
Q 044575 159 VEEVFDAVVVATGHYSYPRLP---SIKGMDKWKRKQMHSHIYRVPEPFRNEVVVVVGNSLSGQDISMELVEVAKEVHLSA 235 (454)
Q Consensus 159 ~~~~~d~vViAtG~~~~p~~p---~i~G~~~~~~~~~~~~~~~~~~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~ 235 (454)
++.||+|||||| +.|..| ++||.+. ..++..+..... .+++|+|||+|.+|+|+|..+++.|.+|+++.
T Consensus 146 -~~~~d~lviAtG--~~p~~p~~~~i~G~~~----~~~~~~~~~~~~-~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~ 217 (478)
T 3dk9_A 146 -KYTAPHILIATG--GMPSTPHESQIPGASL----GITSDGFFQLEE-LPGRSVIVGAGYIAVEMAGILSALGSKTSLMI 217 (478)
T ss_dssp -EEECSCEEECCC--EEECCCCTTTSTTGGG----SBCHHHHTTCCS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred -EEEeeEEEEccC--CCCCCCCcCCCCCCce----eEchHHhhchhh-cCccEEEECCCHHHHHHHHHHHHcCCeEEEEE
Confidence 689999999999 899999 8999762 234444333322 36899999999999999999999999999999
Q ss_pred ccCCcCccchh--------hhcc-CCCeEEcCceeEEecC--C---cEEEeC---C----CEEeeceEEEccCcccCCcC
Q 044575 236 KSLNISEGLSK--------VISK-HNNLHLHPQIDCLRED--G---RVTFVD---G----CWVTADTILYCTGYSYSFPF 294 (454)
Q Consensus 236 r~~~~~~~~~~--------~l~~-~~~i~~~~~v~~v~~~--~---~v~~~d---G----~~i~~D~vI~atG~~~~~~~ 294 (454)
+.+++.+.+.+ .+.+ .++++.+..|+++..+ + .+.+.+ | +++++|.||+|+|++|+.++
T Consensus 218 ~~~~~l~~~d~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~~~~ 297 (478)
T 3dk9_A 218 RHDKVLRSFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKD 297 (478)
T ss_dssp SSSSSCTTSCHHHHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEESCTT
T ss_pred eCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeeccccCCCC
Confidence 98887544332 2332 3477778888888643 2 255655 2 56889999999999999885
Q ss_pred CC---------CCCceeeCCCCcccccCcccCCCCCCCceEeccccccc-chhHHHHHHHHHHHHHcCC
Q 044575 295 LD---------TKGIVVVDDDRVGPLYEHTFPPSLAPSLSFVGIPRKLI-GFPFFESQAKWIAQLLSGK 353 (454)
Q Consensus 295 l~---------~~g~i~v~~~~~~~~~~~~~~~~~~p~l~~iG~~~~~~-~~~~a~~qa~~~a~~i~g~ 353 (454)
|. ++|.+.+|++.. ++.|++|++||+...+ ..+.|..||+.+|+++.|.
T Consensus 298 l~l~~~g~~~~~~G~i~vd~~~~----------t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 356 (478)
T 3dk9_A 298 LSLNKLGIQTDDKGHIIVDEFQN----------TNVKGIYAVGDVCGKALLTPVAIAAGRKLAHRLFEY 356 (478)
T ss_dssp SCGGGGTCCBCTTCCBCCCTTCB----------CSSTTEEECGGGGCSSCCHHHHHHHHHHHHHHHHSC
T ss_pred CCchhcCCeeCCCCCEeeCCCcc----------cCCCCEEEEEecCCCCccHhHHHHHHHHHHHHHcCC
Confidence 42 345566665443 4579999999998544 4589999999999999886
No 55
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=100.00 E-value=4.4e-32 Score=275.41 Aligned_cols=215 Identities=18% Similarity=0.240 Sum_probs=151.3
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCC--------------cEEEEeeCCCCCcccccCCCCCCCCccccccccc-eecCC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGH--------------RVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASL-RLTSP 75 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~--------------~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~-~~~~~ 75 (454)
+.+|||||||||+||++|..|.+.|. ..+.+|+.+.++ |+.....+...+..+....+ ....|
T Consensus 38 ~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~--Wh~g~~~p~~~~q~~fl~Dlvtl~~P 115 (501)
T 4b63_A 38 ELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFA--WHSGMLVPGSKMQISFIKDLATLRDP 115 (501)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCC--SSGGGCCTTCBCSSCGGGSSSTTTCT
T ss_pred CcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCC--cCCCCCCCCccccccchhhhccccCC
Confidence 35899999999999999999987543 456777766554 54321111111111111111 11112
Q ss_pred ccccccCC--------CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEE
Q 044575 76 REIMGYTD--------FPFVLKKGRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWV 147 (454)
Q Consensus 76 ~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~ 147 (454)
..-++|.. ++|.. ....||++.|+.+|+++++++|+.. ++|+++|++|++.+.+.. ..... .|+
T Consensus 116 ~s~~sf~~yl~~~~rl~~f~~----~~~~~p~r~E~~~Yl~~~A~~~~~~--vrf~~~V~~v~~~~~~~~-~~~~~-~~~ 187 (501)
T 4b63_A 116 RSSFTFLNYLHQKGRLIHFTN----LSTFLPARLEFEDYMRWCAQQFSDV--VAYGEEVVEVIPGKSDPS-SSVVD-FFT 187 (501)
T ss_dssp TCTTSHHHHHHHHTCHHHHHT----TCCSCCBHHHHHHHHHHHHHTTGGG--EEESEEEEEEEEECSSTT-SSCBC-EEE
T ss_pred CCccchHHHHHHhCCccCCcc----ccCCCCCHHHHHHHHHHHHHHcCCc--eEcceEEEeecccccccc-ccccc-eEE
Confidence 21122111 12222 4567899999999999999988744 999999999998754310 00111 699
Q ss_pred EEEeecCCCeEEEEEeCEEEEccCCCCCCCCCCCCCcCCccceeEEeecCCC------CCCCCCCeEEEEcCCCCHHHHH
Q 044575 148 VKSKEKKADKVVEEVFDAVVVATGHYSYPRLPSIKGMDKWKRKQMHSHIYRV------PEPFRNEVVVVVGNSLSGQDIS 221 (454)
Q Consensus 148 v~~~~~~~~~~~~~~~d~vViAtG~~~~p~~p~i~G~~~~~~~~~~~~~~~~------~~~~~~k~vvVVG~G~sg~e~A 221 (454)
|++.++.++...++.+++||+||| ..|.+| +...+.+.++|+..|.. ...++||+|+|||+|.||+|++
T Consensus 188 V~~~~~~~g~~~~~~ar~vVlatG--~~P~iP---~~~~~~g~v~Hss~y~~~~~~~~~~~~~gKrV~VVG~G~SA~ei~ 262 (501)
T 4b63_A 188 VRSRNVETGEISARRTRKVVIAIG--GTAKMP---SGLPQDPRIIHSSKYCTTLPALLKDKSKPYNIAVLGSGQSAAEIF 262 (501)
T ss_dssp EEEEETTTCCEEEEEEEEEEECCC--CEECCC---TTSCCCTTEEEGGGHHHHHHHHSCCTTSCCEEEEECCSHHHHHHH
T ss_pred EEEecCCCceEEEEEeCEEEECcC--CCCCCC---CCCCCCcceeeccccccchhhccccccCCcEEEEECCcHHHHHHH
Confidence 999998777778899999999999 677766 44457789999998853 5678999999999999999999
Q ss_pred HHHhhh--cCeEEEecccCCc
Q 044575 222 MELVEV--AKEVHLSAKSLNI 240 (454)
Q Consensus 222 ~~l~~~--~~~V~l~~r~~~~ 240 (454)
.+|++. +.+|+++.|++.+
T Consensus 263 ~~L~~~~~~~~v~~~~R~~~~ 283 (501)
T 4b63_A 263 HDLQKRYPNSRTTLIMRDSAM 283 (501)
T ss_dssp HHHHHHSTTCEEEEECSSSSC
T ss_pred HHHHhcCCCceEEEEeCCCcc
Confidence 999875 7899999998765
No 56
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=100.00 E-value=1.4e-32 Score=279.83 Aligned_cols=302 Identities=17% Similarity=0.182 Sum_probs=204.8
Q ss_pred CcEEEECcChHHHHHHHHHHHc---CCcEEEEeeCCCCCcccccCCCCCCCCccc--cccccceecCCccccccCCCCCC
Q 044575 13 KNVCVIGAGPSGLVAARELRKE---GHRVVVLEQNHDVGGQWLYDPNTDQTEVHS--SVYASLRLTSPREIMGYTDFPFV 87 (454)
Q Consensus 13 ~~VvIIGaG~aGl~aA~~l~~~---g~~v~vie~~~~~GG~w~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 87 (454)
+||+|||||++|+++|..|++. |++|+|||+++ +||+|.+.+|.|++.+.. ..+..+. .+..+.++
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~~~g~~psk~l~~~a~~~~~~~--------~~~~~g~~ 73 (499)
T 1xdi_A 3 TRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELR--------RAPHLGFH 73 (499)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHT--------TTTTTTBC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCcccCcCccchHHHHHHHHHHHHHH--------HHHhCCCc
Confidence 7899999999999999999999 99999999987 999999888766541100 0011000 11111111
Q ss_pred CCCCCCCCCCCCHHHHH-----------HHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCC
Q 044575 88 LKKGRDVRRFPGHKELW-----------LYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKAD 156 (454)
Q Consensus 88 ~~~~~~~~~~~~~~~~~-----------~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~ 156 (454)
... . ........+. .++.++.++.++. +..++ +..++..+... .. .+.|...++
T Consensus 74 ~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~--~~~g~-~~~i~~~~~~~-----~~-~~~V~~~~g--- 138 (499)
T 1xdi_A 74 IDF--D-DAKISLPQIHARVKTLAAAQSADITAQLLSMGVQ--VIAGR-GELIDSTPGLA-----RH-RIKATAADG--- 138 (499)
T ss_dssp ---------CBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCE--EEESE-EEECCSSSCCS-----SE-EEEEECTTS---
T ss_pred ccc--C-CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEEeE-EEEecCcccCC-----CC-EEEEEeCCC---
Confidence 000 0 0011223333 3345666677776 66664 55554310000 00 445544322
Q ss_pred eEEEEEeCEEEEccCCCCCCCCCCCCCcCCccceeEEeecCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEecc
Q 044575 157 KVVEEVFDAVVVATGHYSYPRLPSIKGMDKWKRKQMHSHIYRVPEPFRNEVVVVVGNSLSGQDISMELVEVAKEVHLSAK 236 (454)
Q Consensus 157 ~~~~~~~d~vViAtG~~~~p~~p~i~G~~~~~~~~~~~~~~~~~~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r 236 (454)
....+.||+||+||| +.|..|++||.+.. .++++.+...... .+++++|||+|.+|+|+|..+.+.+.+|+++++
T Consensus 139 ~~~~~~~d~lviATG--s~p~~p~i~g~~~~--~v~~~~~~~~~~~-~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~ 213 (499)
T 1xdi_A 139 STSEHEADVVLVATG--ASPRILPSAQPDGE--RILTWRQLYDLDA-LPDHLIVVGSGVTGAEFVDAYTELGVPVTVVAS 213 (499)
T ss_dssp CEEEEEESEEEECCC--EEECCCGGGCCCSS--SEEEGGGGGGCSS-CCSSEEEESCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred cEEEEEeCEEEEcCC--CCCCCCCCCCCCcC--cEEehhHhhhhhc-cCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEc
Confidence 223689999999999 89999988887643 2445544433322 458999999999999999999999999999999
Q ss_pred cCCcCccchh--------hhcc-CCCeEEcCceeEEecCC---cEEEeCCCEEeeceEEEccCcccCCcCC--CC-----
Q 044575 237 SLNISEGLSK--------VISK-HNNLHLHPQIDCLREDG---RVTFVDGCWVTADTILYCTGYSYSFPFL--DT----- 297 (454)
Q Consensus 237 ~~~~~~~~~~--------~l~~-~~~i~~~~~v~~v~~~~---~v~~~dG~~i~~D~vI~atG~~~~~~~l--~~----- 297 (454)
.+.+.+.+.+ .+.+ .++++.++.|+++..++ .|.+.+|+++++|.||+|+|++|+.++| ..
T Consensus 214 ~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~ 293 (499)
T 1xdi_A 214 QDHVLPYEDADAALVLEESFAERGVRLFKNARAASVTRTGAGVLVTMTDGRTVEGSHALMTIGSVPNTSGLGLERVGIQL 293 (499)
T ss_dssp SSSSSCCSSHHHHHHHHHHHHHTTCEEETTCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEECCSSSCTTTTTCCC
T ss_pred CCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCEEEEEECCCcEEEcCEEEECCCCCcCCCcCCchhcCceE
Confidence 9887554332 2222 35788888999997543 3455678899999999999999999873 32
Q ss_pred --CCceeeCCCCcccccCcccCCCCCCCceEecccccccc-hhHHHHHHHHHHHHHcCC
Q 044575 298 --KGIVVVDDDRVGPLYEHTFPPSLAPSLSFVGIPRKLIG-FPFFESQAKWIAQLLSGK 353 (454)
Q Consensus 298 --~g~i~v~~~~~~~~~~~~~~~~~~p~l~~iG~~~~~~~-~~~a~~qa~~~a~~i~g~ 353 (454)
+|.|.||+..+ ++.|++|++||+...+. .+.|..||+.+|.++.|+
T Consensus 294 ~~~G~i~Vd~~~~----------t~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~g~ 342 (499)
T 1xdi_A 294 GRGNYLTVDRVSR----------TLATGIYAAGDCTGLLPLASVAAMQGRIAMYHALGE 342 (499)
T ss_dssp BTTTBCCCCSSSB----------CSSTTEEECSGGGTSCSCHHHHHHHHHHHHHHHTTC
T ss_pred CCCCCEEECCCcc----------cCCCCEEEEeccCCCcccHHHHHHHHHHHHHHhcCC
Confidence 24455554433 45799999999987543 578999999999999987
No 57
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=100.00 E-value=1.1e-32 Score=279.60 Aligned_cols=296 Identities=18% Similarity=0.206 Sum_probs=199.8
Q ss_pred CCcEEEECcChHHHHHHHHHHH-cCCcEEEEe--------eCCCCCcccccCCCCCCCCc-ccc-ccccceecCCccccc
Q 044575 12 SKNVCVIGAGPSGLVAARELRK-EGHRVVVLE--------QNHDVGGQWLYDPNTDQTEV-HSS-VYASLRLTSPREIMG 80 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~-~g~~v~vie--------~~~~~GG~w~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~ 80 (454)
.+||+|||||++|++||..|++ .|++|+||| +.+.+||+|.+.+|.|++.+ ... .+..++ +.+
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~~~~-~~~----- 76 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIR-ESA----- 76 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHHHHHH-HGG-----
T ss_pred cccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCccccCCCcchhhHHHHHHHHHHHHH-HHH-----
Confidence 4799999999999999999999 999999999 35789999999888776511 111 111111 000
Q ss_pred cCCCCCCCCCCCCCC-CCCCHHHHHHHHHH-----------HHHHh-CCCccEEeCeEEEEEEEcCCCccccCCcCCcEE
Q 044575 81 YTDFPFVLKKGRDVR-RFPGHKELWLYLKD-----------FCQRF-GLREMIRFNTRVEYVGMLDCGELIIGNDLIKWV 147 (454)
Q Consensus 81 ~~~~~~~~~~~~~~~-~~~~~~~~~~yl~~-----------~~~~~-~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~ 147 (454)
.+.+.. ... ......++.++.++ ..++. ++. +..+ ++..++. .+
T Consensus 77 --~~g~~~----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~--~~~g-~~~~i~~--------------~~ 133 (490)
T 1fec_A 77 --GFGWEL----DRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLT--FHQG-FGALQDN--------------HT 133 (490)
T ss_dssp --GGTEEC----CGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTEE--EEES-EEEEEET--------------TE
T ss_pred --hcCccc----CCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcE--EEEe-EEEEeeC--------------CE
Confidence 111100 000 00122344333322 22333 444 4444 3555542 13
Q ss_pred EEEeec--CCCe-EEEEEeCEEEEccCCCCCCCCCCCCCcCCccceeEEeecCCCCCCCCCCeEEEEcCCCCHHHHHHHH
Q 044575 148 VKSKEK--KADK-VVEEVFDAVVVATGHYSYPRLPSIKGMDKWKRKQMHSHIYRVPEPFRNEVVVVVGNSLSGQDISMEL 224 (454)
Q Consensus 148 v~~~~~--~~~~-~~~~~~d~vViAtG~~~~p~~p~i~G~~~~~~~~~~~~~~~~~~~~~~k~vvVVG~G~sg~e~A~~l 224 (454)
+.+... .++. ..++.||+|||||| +.|..|++||.+. .+++..+.... ..+++++|||+|.+|+|+|..+
T Consensus 134 v~v~~~~~~~g~~~~~~~~d~lviAtG--s~p~~p~i~g~~~----~~~~~~~~~~~-~~~~~vvViGgG~ig~E~A~~l 206 (490)
T 1fec_A 134 VLVRESADPNSAVLETLDTEYILLATG--SWPQHLGIEGDDL----CITSNEAFYLD-EAPKRALCVGGGYISIEFAGIF 206 (490)
T ss_dssp EEEESSSSTTSCEEEEEEEEEEEECCC--EEECCCCSBTGGG----CBCHHHHTTCS-SCCSEEEEECSSHHHHHHHHHH
T ss_pred EEEEeeccCCCCceEEEEcCEEEEeCC--CCCCCCCCCCccc----eecHHHHhhhh-hcCCeEEEECCCHHHHHHHHHH
Confidence 444310 0111 13789999999999 8999999998742 23333333222 2468999999999999999999
Q ss_pred hhh---cCeEEEecccCCcCccchh--------hhcc-CCCeEEcCceeEEecC--C--cEEEeCCCEEeeceEEEccCc
Q 044575 225 VEV---AKEVHLSAKSLNISEGLSK--------VISK-HNNLHLHPQIDCLRED--G--RVTFVDGCWVTADTILYCTGY 288 (454)
Q Consensus 225 ~~~---~~~V~l~~r~~~~~~~~~~--------~l~~-~~~i~~~~~v~~v~~~--~--~v~~~dG~~i~~D~vI~atG~ 288 (454)
++. |.+|+++++.+.+.+.+++ .+.+ .++++.+..|+++..+ + .|.+.+|+++++|.||+|+|+
T Consensus 207 ~~~~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~ 286 (490)
T 1fec_A 207 NAYKARGGQVDLAYRGDMILRGFDSELRKQLTEQLRANGINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGR 286 (490)
T ss_dssp HHHSCTTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTEEEEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCE
T ss_pred HhhccCcCeEEEEEcCCCcccccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCC
Confidence 999 9999999999887554332 2222 3478889999999754 2 467788989999999999999
Q ss_pred ccCCcCC--C-------CCCceeeCCCCcccccCcccCCCCCCCceEecccccc-cchhHHHHHHHHHHHHHcCC
Q 044575 289 SYSFPFL--D-------TKGIVVVDDDRVGPLYEHTFPPSLAPSLSFVGIPRKL-IGFPFFESQAKWIAQLLSGK 353 (454)
Q Consensus 289 ~~~~~~l--~-------~~g~i~v~~~~~~~~~~~~~~~~~~p~l~~iG~~~~~-~~~~~a~~qa~~~a~~i~g~ 353 (454)
+|+.++| . ++|.|.+|+..+ ++.|++|++||+... ...+.|..||+.+|.++.|.
T Consensus 287 ~p~~~~L~l~~~gl~~~~~G~I~Vd~~~~----------t~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~g~ 351 (490)
T 1fec_A 287 VPRSQTLQLEKAGVEVAKNGAIKVDAYSK----------TNVDNIYAIGDVTDRVMLTPVAINEGAAFVDTVFAN 351 (490)
T ss_dssp EESCTTSCGGGGTCCBCTTSCBCCCTTCB----------CSSTTEEECGGGGCSCCCHHHHHHHHHHHHHHHHSS
T ss_pred CcCccccCchhcCccCCCCCCEEECCCCc----------cCCCCEEEEeccCCCccCHHHHHHHHHHHHHHhcCC
Confidence 9998754 2 245555555443 457999999999864 35689999999999999885
No 58
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=1.1e-32 Score=274.11 Aligned_cols=279 Identities=19% Similarity=0.215 Sum_probs=196.6
Q ss_pred cCCCcEEEECcChHHHHHHHHHHHcCCc--EEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCC
Q 044575 10 AQSKNVCVIGAGPSGLVAARELRKEGHR--VVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFV 87 (454)
Q Consensus 10 ~~~~~VvIIGaG~aGl~aA~~l~~~g~~--v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (454)
.+.++|+|||||+||++||.+|++.|++ |+|||+++.++.... + .++.... +.
T Consensus 7 ~~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~------------~--------l~~~~~~--~~--- 61 (415)
T 3lxd_A 7 AERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYERP------------P--------LSKEYLA--RE--- 61 (415)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCSG------------G--------GGTTTTT--TS---
T ss_pred CCCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCcc------------c--------CCHHHHc--CC---
Confidence 3458999999999999999999999986 999999875432110 0 0000000 00
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEE
Q 044575 88 LKKGRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVV 167 (454)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vV 167 (454)
....++..+..++..+.++. ++++++|..++.. .++|.+.++. .+.||+||
T Consensus 62 ----------~~~~~~~~~~~~~~~~~~i~--~~~~~~v~~id~~------------~~~v~~~~g~-----~~~~d~lv 112 (415)
T 3lxd_A 62 ----------KTFERICIRPAQFWEDKAVE--MKLGAEVVSLDPA------------AHTVKLGDGS-----AIEYGKLI 112 (415)
T ss_dssp ----------SCSGGGBSSCHHHHHHTTEE--EEETCCEEEEETT------------TTEEEETTSC-----EEEEEEEE
T ss_pred ----------CCHHHhccCCHHHHHHCCcE--EEeCCEEEEEECC------------CCEEEECCCC-----EEEeeEEE
Confidence 00011111223445566776 8888899999765 5567776654 78999999
Q ss_pred EccCCCCCCCCCCCCCcCCccceeEEeec-CC--CCCCCC-CCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCcCcc
Q 044575 168 VATGHYSYPRLPSIKGMDKWKRKQMHSHI-YR--VPEPFR-NEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNISEG 243 (454)
Q Consensus 168 iAtG~~~~p~~p~i~G~~~~~~~~~~~~~-~~--~~~~~~-~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~~~~ 243 (454)
+||| +.|+.|++||.+......+++.. .. ...... +++|+|||+|.+|+|+|..+.+.+.+|+++++.+.+.+.
T Consensus 113 lAtG--~~~~~~~i~g~~~~~v~~~~~~~d~~~l~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~ 190 (415)
T 3lxd_A 113 WATG--GDPRRLSCVGADLAGVHAVRTKEDADRLMAELDAGAKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLAR 190 (415)
T ss_dssp ECCC--EECCCCBTTSSCCBTEECCCSHHHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT
T ss_pred EccC--CccCCCCCCCccccCEEEEcCHHHHHHHHHHhhhcCCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhh
Confidence 9999 89999999987632211111110 00 000112 799999999999999999999999999999999876432
Q ss_pred -----c----hhhhcc-CCCeEEcCceeEEecCC----cEEEeCCCEEeeceEEEccCcccCCcCCCC-----CCceeeC
Q 044575 244 -----L----SKVISK-HNNLHLHPQIDCLREDG----RVTFVDGCWVTADTILYCTGYSYSFPFLDT-----KGIVVVD 304 (454)
Q Consensus 244 -----~----~~~l~~-~~~i~~~~~v~~v~~~~----~v~~~dG~~i~~D~vI~atG~~~~~~~l~~-----~g~i~v~ 304 (454)
+ .+.+.+ .++++.+..|+++..++ .|.+.||+++++|.||+|+|++|+.+++.. .+.+.+|
T Consensus 191 ~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~~gi~vd 270 (415)
T 3lxd_A 191 VAGEALSEFYQAEHRAHGVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIVGIGIVPCVGALISAGASGGNGVDVD 270 (415)
T ss_dssp TSCHHHHHHHHHHHHHTTCEEEETCCEEEEEESSSBEEEEEESSSCEEECSEEEECSCCEESCHHHHHTTCCCSSSEECC
T ss_pred hcCHHHHHHHHHHHHhCCCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECCCCccChHHHHhCCCCcCCCEEEC
Confidence 2 222333 35788899999997542 478889999999999999999999877532 1236666
Q ss_pred CCCcccccCcccCCCCCCCceEecccccccc------------hhHHHHHHHHHHHHHcCCC
Q 044575 305 DDRVGPLYEHTFPPSLAPSLSFVGIPRKLIG------------FPFFESQAKWIAQLLSGKR 354 (454)
Q Consensus 305 ~~~~~~~~~~~~~~~~~p~l~~iG~~~~~~~------------~~~a~~qa~~~a~~i~g~~ 354 (454)
+... ++.|++|++|++...+. ++.|..||+.+|++|.|+.
T Consensus 271 ~~~~----------t~~~~iyA~GD~a~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~ 322 (415)
T 3lxd_A 271 EFCR----------TSLTDVYAIGDCAAHANDFADGAVIRLESVQNANDMATAAAKDICGAP 322 (415)
T ss_dssp TTCB----------CSSTTEEECGGGEEEECGGGTTCEECCCSHHHHHHHHHHHHHHHTTCC
T ss_pred CCCC----------cCCCCEEEEEeeeeecCcccCCcceeechHHHHHHHHHHHHHHhcCCC
Confidence 6544 45699999999885432 4789999999999999974
No 59
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=100.00 E-value=9.9e-33 Score=286.53 Aligned_cols=281 Identities=18% Similarity=0.275 Sum_probs=203.2
Q ss_pred CCCcEEEECcChHHHHHHHHHHHc--CCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKE--GHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVL 88 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~--g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (454)
..++|+|||||+||++||..|++. |.+|+|||+++.+|.. ++ .. | +..
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~~----~~---------~l-------p----------~~~ 84 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISFA----NC---------GL-------P----------YYI 84 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBC----GG---------GH-------H----------HHH
T ss_pred cCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCcccc----CC---------CC-------c----------hhh
Confidence 357999999999999999999998 8999999998865411 00 00 0 000
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEE
Q 044575 89 KKGRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVV 168 (454)
Q Consensus 89 ~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVi 168 (454)
..........+..++..+.+++++. ++++++|++++... ..+.+.+..++...++.||+|||
T Consensus 85 ----~g~~~~~~~~~~~~~~~~~~~~gi~--v~~~~~V~~id~~~------------~~v~v~~~~~g~~~~~~~d~lvi 146 (588)
T 3ics_A 85 ----GGVITERQKLLVQTVERMSKRFNLD--IRVLSEVVKINKEE------------KTITIKNVTTNETYNEAYDVLIL 146 (588)
T ss_dssp ----TTSSCCGGGGBSSCHHHHHHHTTCE--EECSEEEEEEETTT------------TEEEEEETTTCCEEEEECSEEEE
T ss_pred ----cCcCCChHHhhccCHHHHHHhcCcE--EEECCEEEEEECCC------------CEEEEeecCCCCEEEEeCCEEEE
Confidence 0000111223456677888888988 88999999998653 23444432223345789999999
Q ss_pred ccCCCCCCCCCCCCCcCCccceeEEeecCCCCC-------CCCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCcC
Q 044575 169 ATGHYSYPRLPSIKGMDKWKRKQMHSHIYRVPE-------PFRNEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNIS 241 (454)
Q Consensus 169 AtG~~~~p~~p~i~G~~~~~~~~~~~~~~~~~~-------~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~~ 241 (454)
||| +.|..|++||.+...+ +++........ ...+++|+|||+|.+|+|+|..+++.|.+|+++.+.+.+.
T Consensus 147 AtG--~~p~~p~i~G~~~~~~-v~~~~~~~~~~~~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l 223 (588)
T 3ics_A 147 SPG--AKPIVPSIPGIEEAKA-LFTLRNVPDTDRIKAYIDEKKPRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVM 223 (588)
T ss_dssp CCC--EEECCCCCTTTTTCTT-EEECSSHHHHHHHHHHHHHHCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred CCC--CCCCCCCCCCcccCCC-eEEeCCHHHHHHHHHHHhhcCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccc
Confidence 999 8999999999843332 23322211110 1356899999999999999999999999999999988875
Q ss_pred ccchh--------hhcc-CCCeEEcCceeEEecC-CcEEEeCCCEEeeceEEEccCcccCCcCCC-------CCCceeeC
Q 044575 242 EGLSK--------VISK-HNNLHLHPQIDCLRED-GRVTFVDGCWVTADTILYCTGYSYSFPFLD-------TKGIVVVD 304 (454)
Q Consensus 242 ~~~~~--------~l~~-~~~i~~~~~v~~v~~~-~~v~~~dG~~i~~D~vI~atG~~~~~~~l~-------~~g~i~v~ 304 (454)
+.+.. .+.+ .++++.+..|+++..+ +.|++.+|+++++|.||+|||++|++++++ ++|.+.+|
T Consensus 224 ~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~~~g~~i~~D~Vi~a~G~~p~~~~l~~~g~~~~~~g~i~vd 303 (588)
T 3ics_A 224 PPIDYEMAAYVHEHMKNHDVELVFEDGVDALEENGAVVRLKSGSVIQTDMLILAIGVQPESSLAKGAGLALGVRGTIKVN 303 (588)
T ss_dssp TTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEGGGTEEEETTSCEEECSEEEECSCEEECCHHHHHTTCCBCGGGCBCCC
T ss_pred ccCCHHHHHHHHHHHHHcCCEEEECCeEEEEecCCCEEEECCCCEEEcCEEEEccCCCCChHHHHhcCceEcCCCCEEEC
Confidence 54332 2222 3578888999999753 368899999999999999999999987653 34556666
Q ss_pred CCCcccccCcccCCCCCCCceEecccccc-----------cchhHHHHHHHHHHHHHcC
Q 044575 305 DDRVGPLYEHTFPPSLAPSLSFVGIPRKL-----------IGFPFFESQAKWIAQLLSG 352 (454)
Q Consensus 305 ~~~~~~~~~~~~~~~~~p~l~~iG~~~~~-----------~~~~~a~~qa~~~a~~i~g 352 (454)
+... ++.|++|++||+... ...+.|..||+.+|+++.|
T Consensus 304 ~~~~----------t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 352 (588)
T 3ics_A 304 EKFQ----------TSDPHIYAIGDAIEVKDFVTETETMIPLAWPANRQGRMLADIIHG 352 (588)
T ss_dssp TTSB----------CSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTT
T ss_pred Cccc----------cCCCCEEEeeeeeecccccCCcccccccHHHHHHHHHHHHHHhcC
Confidence 6544 457999999999731 2346899999999999998
No 60
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=100.00 E-value=5.8e-33 Score=279.48 Aligned_cols=292 Identities=18% Similarity=0.152 Sum_probs=198.9
Q ss_pred CcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCcc--ccccccceecCCccccccCCCCCCCCC
Q 044575 13 KNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVH--SSVYASLRLTSPREIMGYTDFPFVLKK 90 (454)
Q Consensus 13 ~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (454)
+||+|||||+||+++|..|++.|.+|+|||+++.+||.|.+.+|.|++.+. ...+..+.. + .+.++.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~--~-------~~g~~~-- 70 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKK--G-------LLGAKV-- 70 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHH--C-------CTTEEE--
T ss_pred CCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhh--h-------cCCccc--
Confidence 689999999999999999999999999999998999999988876654110 011111111 0 011100
Q ss_pred CCCCCCCCCHHHHHH-----------HHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEE
Q 044575 91 GRDVRRFPGHKELWL-----------YLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVV 159 (454)
Q Consensus 91 ~~~~~~~~~~~~~~~-----------yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 159 (454)
.. ......++.. .+..++++.++. +..++.+ .+ +.. .++|.+ ++.
T Consensus 71 --~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~--~~~g~~~-~i---~~~---------~~~v~~-~g~----- 126 (455)
T 2yqu_A 71 --KG-VELDLPALMAHKDKVVQANTQGVEFLFKKNGIA--RHQGTAR-FL---SER---------KVLVEE-TGE----- 126 (455)
T ss_dssp --CC-EEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCE--EEESCEE-ES---SSS---------EEEETT-TCC-----
T ss_pred --CC-CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEEeEEE-Ee---cCC---------eEEEee-CCE-----
Confidence 00 0012223322 234455556665 5555533 22 211 455543 322
Q ss_pred EEEeCEEEEccCCCCCCCCCCCCCcCCccceeEEeecCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCC
Q 044575 160 EEVFDAVVVATGHYSYPRLPSIKGMDKWKRKQMHSHIYRVPEPFRNEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLN 239 (454)
Q Consensus 160 ~~~~d~vViAtG~~~~p~~p~i~G~~~~~~~~~~~~~~~~~~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~ 239 (454)
++.||+||+||| +.|..|+++|.+.. .++++.+...... .+++|+|||+|.+|+|+|..|++.+.+|+++++.+.
T Consensus 127 ~~~~d~lviAtG--~~p~~~~~~g~~~~--~v~~~~~~~~~~~-~~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~ 201 (455)
T 2yqu_A 127 ELEARYILIATG--SAPLIPPWAQVDYE--RVVTSTEALSFPE-VPKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDR 201 (455)
T ss_dssp EEEEEEEEECCC--EEECCCTTBCCCSS--SEECHHHHTCCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred EEEecEEEECCC--CCCCCCCCCCCCcC--cEechHHhhcccc-CCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCc
Confidence 789999999999 88999988886431 2455554433322 468999999999999999999999999999999888
Q ss_pred cCccchh--------hhc-cCCCeEEcCceeEEecCC---cEEEeCCCEEeeceEEEccCcccCCcCC--CC-------C
Q 044575 240 ISEGLSK--------VIS-KHNNLHLHPQIDCLREDG---RVTFVDGCWVTADTILYCTGYSYSFPFL--DT-------K 298 (454)
Q Consensus 240 ~~~~~~~--------~l~-~~~~i~~~~~v~~v~~~~---~v~~~dG~~i~~D~vI~atG~~~~~~~l--~~-------~ 298 (454)
+.+.+.. .+. ..++++.+..|+++..++ .+.+.+|+++++|.||+|||++|+.+++ +. +
T Consensus 202 ~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~~D~vv~A~G~~p~~~~l~~~~~g~~~~~~ 281 (455)
T 2yqu_A 202 ILPTMDLEVSRAAERVFKKQGLTIRTGVRVTAVVPEAKGARVELEGGEVLEADRVLVAVGRRPYTEGLSLENAGLSTDER 281 (455)
T ss_dssp SCTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEECCTTCCGGGGTCCCCTT
T ss_pred cccccCHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCCeEEEcCEEEECcCCCcCCCCCChhhcCCccCCC
Confidence 7543322 222 235788888999987433 3455588899999999999999998764 21 2
Q ss_pred CceeeCCCCcccccCcccCCCCCCCceEecccccccc-hhHHHHHHHHHHHHHcCCC
Q 044575 299 GIVVVDDDRVGPLYEHTFPPSLAPSLSFVGIPRKLIG-FPFFESQAKWIAQLLSGKR 354 (454)
Q Consensus 299 g~i~v~~~~~~~~~~~~~~~~~~p~l~~iG~~~~~~~-~~~a~~qa~~~a~~i~g~~ 354 (454)
|.+.+|+... +..|++|++|++...+. .+.|..||+.+|.++.|+.
T Consensus 282 g~i~vd~~~~----------t~~~~iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~~ 328 (455)
T 2yqu_A 282 GRIPVDEHLR----------TRVPHIYAIGDVVRGPMLAHKASEEGIAAVEHMVRGF 328 (455)
T ss_dssp SCCCCCTTSB----------CSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHHHSC
T ss_pred CcEeECCCcc----------cCCCCEEEEecCCCCccCHHHHHHhHHHHHHHHcCCC
Confidence 3344444322 34699999999986543 4789999999999998853
No 61
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=1.7e-32 Score=276.04 Aligned_cols=297 Identities=15% Similarity=0.167 Sum_probs=198.3
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCc-c-ccccccceecCCccccccCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEV-H-SSVYASLRLTSPREIMGYTDFPFVLK 89 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (454)
.+||+|||||+||++||..|++.|.+|+|||+ +.+||+|.+.+|.|++.+ . ...+..+.. ... +..+.++.
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~-~~~----~~~~g~~~- 77 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGGTCLNIGCIPSKALIHVAEQFHQASR-FTE----PSPLGISV- 77 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHH-TTS----CCTTCCCC-
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCcCCCcCcHhHHHHHHHHHHHHHHhh-ccc----ccccCccc-
Confidence 48999999999999999999999999999999 789999998888765411 1 111222210 000 00011110
Q ss_pred CCCCCCCCCCHHHHHHH-----------HHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeE
Q 044575 90 KGRDVRRFPGHKELWLY-----------LKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKV 158 (454)
Q Consensus 90 ~~~~~~~~~~~~~~~~y-----------l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 158 (454)
. .......++..+ +..+.++.++. +..++.+. ++ .++|++.+
T Consensus 78 ---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~--~~~g~~~~-~~--------------~~~v~v~~------ 130 (458)
T 1lvl_A 78 ---A-SPRLDIGQSVAWKDGIVDRLTTGVAALLKKHGVK--VVHGWAKV-LD--------------GKQVEVDG------ 130 (458)
T ss_dssp ---C-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCE--EECSCEEE-EE--------------TTEEEETT------
T ss_pred ---C-CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcE--EEEEEEEE-cc--------------CCEEEEee------
Confidence 0 011233444333 33455566766 66665443 32 33455542
Q ss_pred EEEEeCEEEEccCCCCCCCCCC-CCCcCCccceeEEeecCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEeccc
Q 044575 159 VEEVFDAVVVATGHYSYPRLPS-IKGMDKWKRKQMHSHIYRVPEPFRNEVVVVVGNSLSGQDISMELVEVAKEVHLSAKS 237 (454)
Q Consensus 159 ~~~~~d~vViAtG~~~~p~~p~-i~G~~~~~~~~~~~~~~~~~~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~ 237 (454)
.++.||+|||||| +.|+.|+ +| .+ +.++++.++..... .+++|+|||+|.+|+|+|..|++.|.+|+++++.
T Consensus 131 ~~~~~d~lviATG--s~p~~~~~~~-~~---~~v~~~~~~~~~~~-~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~ 203 (458)
T 1lvl_A 131 QRIQCEHLLLATG--SSSVELPMLP-LG---GPVISSTEALAPKA-LPQHLVVVGGGYIGLELGIAYRKLGAQVSVVEAR 203 (458)
T ss_dssp EEEECSEEEECCC--EEECCBTTBC-CB---TTEECHHHHTCCSS-CCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred EEEEeCEEEEeCC--CCCCCCCCCC-cc---CcEecHHHHhhhhc-cCCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcC
Confidence 2789999999999 7888775 44 22 23556555543332 4689999999999999999999999999999999
Q ss_pred CCcCccchhh--------hc-cCCCeEEcCceeEEecCCcEEEe--CC--CEEeeceEEEccCcccCCcCC--CCCCcee
Q 044575 238 LNISEGLSKV--------IS-KHNNLHLHPQIDCLREDGRVTFV--DG--CWVTADTILYCTGYSYSFPFL--DTKGIVV 302 (454)
Q Consensus 238 ~~~~~~~~~~--------l~-~~~~i~~~~~v~~v~~~~~v~~~--dG--~~i~~D~vI~atG~~~~~~~l--~~~g~i~ 302 (454)
+.+.+.+.+. +. ..++++.+..|+++.. +.+.+. +| +++++|.||+|||++|+.+++ +..| +.
T Consensus 204 ~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~-~~v~v~~~~G~~~~i~~D~vv~a~G~~p~~~~l~~~~~g-~~ 281 (458)
T 1lvl_A 204 ERILPTYDSELTAPVAESLKKLGIALHLGHSVEGYEN-GCLLANDGKGGQLRLEADRVLVAVGRRPRTKGFNLECLD-LK 281 (458)
T ss_dssp SSSSTTSCHHHHHHHHHHHHHHTCEEETTCEEEEEET-TEEEEECSSSCCCEECCSCEEECCCEEECCSSSSGGGSC-CC
T ss_pred CccccccCHHHHHHHHHHHHHCCCEEEECCEEEEEEe-CCEEEEECCCceEEEECCEEEECcCCCcCCCCCCcHhcC-Cc
Confidence 8875543322 22 2357888889999976 435555 56 578999999999999998874 3222 23
Q ss_pred eCCCCcccccCcccCCCCCCCceEeccccccc-chhHHHHHHHHHHHHHcCCC
Q 044575 303 VDDDRVGPLYEHTFPPSLAPSLSFVGIPRKLI-GFPFFESQAKWIAQLLSGKR 354 (454)
Q Consensus 303 v~~~~~~~~~~~~~~~~~~p~l~~iG~~~~~~-~~~~a~~qa~~~a~~i~g~~ 354 (454)
+++. ......+ +. ++.|++|++||+...+ ..+.|..||+.+|.++.|..
T Consensus 282 ~~~~-~i~vd~~-~~-t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~g~~ 331 (458)
T 1lvl_A 282 MNGA-AIAIDER-CQ-TSMHNVWAIGDVAGEPMLAHRAMAQGEMVAEIIAGKA 331 (458)
T ss_dssp EETT-EECCCTT-CB-CSSTTEEECGGGGCSSCCHHHHHHHHHHHHHHHTTCC
T ss_pred ccCC-EEeECCC-Cc-CCCCCEEEeeccCCCcccHHHHHHHHHHHHHHhcCCC
Confidence 3322 1111111 12 4569999999998654 35789999999999999853
No 62
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=100.00 E-value=1.1e-32 Score=279.06 Aligned_cols=299 Identities=16% Similarity=0.136 Sum_probs=199.0
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC------CCCcccccCCCCCCCCccc--cccccceecCCccccccC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH------DVGGQWLYDPNTDQTEVHS--SVYASLRLTSPREIMGYT 82 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~------~~GG~w~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 82 (454)
+++||+|||||+||++||..|++.|++|+|||+++ .+||+|.+.+|.|++.+.. ..+....... .
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~-------~ 74 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESF-------K 74 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTS-------G
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHH-------H
Confidence 35899999999999999999999999999999986 4889998888876641110 0111111000 0
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHH-----------HHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEe
Q 044575 83 DFPFVLKKGRDVRRFPGHKELWLYL-----------KDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSK 151 (454)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~yl-----------~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~ 151 (454)
.+.+.. .........+..+. ..+.++.++. +..+. +..+ +.. .+.|...
T Consensus 75 ~~g~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~g~-~~~~---~~~---------~~~v~~~ 134 (476)
T 3lad_A 75 LHGIST-----GEVAIDVPTMIARKDQIVRNLTGGVASLIKANGVT--LFEGH-GKLL---AGK---------KVEVTAA 134 (476)
T ss_dssp GGTEEC-----SCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCE--EEESE-EEEC---STT---------CEEEECT
T ss_pred hcCccc-----CCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEEeE-EEEe---cCC---------EEEEEcC
Confidence 011100 00112223333332 2333444554 44343 2222 211 5666543
Q ss_pred ecCCCeEEEEEeCEEEEccCCCCCCCCCCCCCcCCccceeEEeecCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhhcCeE
Q 044575 152 EKKADKVVEEVFDAVVVATGHYSYPRLPSIKGMDKWKRKQMHSHIYRVPEPFRNEVVVVVGNSLSGQDISMELVEVAKEV 231 (454)
Q Consensus 152 ~~~~~~~~~~~~d~vViAtG~~~~p~~p~i~G~~~~~~~~~~~~~~~~~~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V 231 (454)
+ +...++.||+|||||| +.|..|+.++.+. ..++++....... ..+++|+|||+|.+|+|+|..+++.+.+|
T Consensus 135 ~---g~~~~~~~d~lvlAtG--~~p~~~~~~~~~~--~~v~~~~~~~~~~-~~~~~v~ViGgG~~g~e~A~~l~~~g~~V 206 (476)
T 3lad_A 135 D---GSSQVLDTENVILASG--SKPVEIPPAPVDQ--DVIVDSTGALDFQ-NVPGKLGVIGAGVIGLELGSVWARLGAEV 206 (476)
T ss_dssp T---SCEEEECCSCEEECCC--EEECCCTTSCCCS--SSEEEHHHHTSCS-SCCSEEEEECCSHHHHHHHHHHHHTTCEE
T ss_pred C---CceEEEEcCEEEEcCC--CCCCCCCCCCCCc--ccEEechhhhccc-cCCCeEEEECCCHHHHHHHHHHHHcCCcE
Confidence 3 2234789999999999 7888765554322 2355555443332 35689999999999999999999999999
Q ss_pred EEecccCCcCccchh--------hhcc-CCCeEEcCceeEEecCC---cEEEeCC---CEEeeceEEEccCcccCCcCC-
Q 044575 232 HLSAKSLNISEGLSK--------VISK-HNNLHLHPQIDCLREDG---RVTFVDG---CWVTADTILYCTGYSYSFPFL- 295 (454)
Q Consensus 232 ~l~~r~~~~~~~~~~--------~l~~-~~~i~~~~~v~~v~~~~---~v~~~dG---~~i~~D~vI~atG~~~~~~~l- 295 (454)
+++++.+.+.+.+.+ .+.+ .++++.+..|+++..++ .+.+.++ +++++|.||+|||++|+.+++
T Consensus 207 tlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~D~vi~a~G~~p~~~~l~ 286 (476)
T 3lad_A 207 TVLEAMDKFLPAVDEQVAKEAQKILTKQGLKILLGARVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGRRPVTTDLL 286 (476)
T ss_dssp EEEESSSSSSTTSCHHHHHHHHHHHHHTTEEEEETCEEEEEEECSSCEEEEEESSSEEEEEEESEEEECSCEEECCTTCC
T ss_pred EEEecCCCcCcccCHHHHHHHHHHHHhCCCEEEECCEEEEEEEcCCEEEEEEEeCCCcEEEECCEEEEeeCCcccCCCCC
Confidence 999999887554332 2222 34788889999987443 4667765 578899999999999998764
Q ss_pred -C-------CCCceeeCCCCcccccCcccCCCCCCCceEeccccccc-chhHHHHHHHHHHHHHcCCC
Q 044575 296 -D-------TKGIVVVDDDRVGPLYEHTFPPSLAPSLSFVGIPRKLI-GFPFFESQAKWIAQLLSGKR 354 (454)
Q Consensus 296 -~-------~~g~i~v~~~~~~~~~~~~~~~~~~p~l~~iG~~~~~~-~~~~a~~qa~~~a~~i~g~~ 354 (454)
. ++|.+.+|+..+ ++.|++|++||+...+ ..+.|..||+.+|+++.|+.
T Consensus 287 ~~~~g~~~~~~G~i~vd~~~~----------t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~g~~ 344 (476)
T 3lad_A 287 AADSGVTLDERGFIYVDDYCA----------TSVPGVYAIGDVVRGAMLAHKASEEGVVVAERIAGHK 344 (476)
T ss_dssp SSCCSCCBCTTSCBCCCTTSB----------CSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHHHCC
T ss_pred ccccCccccCCCCEeeCCCcc----------cCCCCEEEEEccCCCcccHHHHHHHHHHHHHHhcCCC
Confidence 2 234455554433 4579999999998544 45899999999999998864
No 63
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.98 E-value=1.7e-32 Score=278.06 Aligned_cols=290 Identities=19% Similarity=0.170 Sum_probs=198.6
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCc-ccc-ccccceecCCccccccCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEV-HSS-VYASLRLTSPREIMGYTDFPFVLK 89 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 89 (454)
.+||+|||||++|++||..|++.|++|+|||+ +.+||.|.+.+|.|++.+ ... .+..+ ..+..+.+..
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~~gcip~k~l~~~a~~~~~~--------~~~~~~g~~~- 95 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGALGKRVAIAEE-YRIGGTCVIRGCVPKKLYFYASQYAQEF--------SKSIGFGWKY- 95 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHH--------HHHGGGTBCC-
T ss_pred CCCEEEECcCHHHHHHHHHHHhCcCEEEEEeC-CCCCCceeccCccccHHHHHHHHHHHHH--------HHHHhCCccc-
Confidence 58999999999999999999999999999999 789999998888766411 100 00000 0111111111
Q ss_pred CCCCCCCCCCHHH-----------HHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEe-ecCCCe
Q 044575 90 KGRDVRRFPGHKE-----------LWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSK-EKKADK 157 (454)
Q Consensus 90 ~~~~~~~~~~~~~-----------~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~-~~~~~~ 157 (454)
..+ ...... +..++....++.++. +..+ .+..++ .+++.+. ++.
T Consensus 96 ---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~g-~~~~i~--------------~~~v~v~~~~~--- 151 (484)
T 3o0h_A 96 ---ADP-IFNWEKLVAAKNKEISRLEGLYREGLQNSNVH--IYES-RAVFVD--------------EHTLELSVTGE--- 151 (484)
T ss_dssp ---CCC-EECHHHHHHHHHHHHHHHHHHHHHHHHHTTCE--EEES-CEEEEE--------------TTEEEETTTCC---
T ss_pred ---CCC-ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEEe-EEEEee--------------CCEEEEecCCe---
Confidence 000 112222 233344444555654 3333 444443 2345553 332
Q ss_pred EEEEEeCEEEEccCCCCCCC-CCCCCCcCCccceeEEeecCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEecc
Q 044575 158 VVEEVFDAVVVATGHYSYPR-LPSIKGMDKWKRKQMHSHIYRVPEPFRNEVVVVVGNSLSGQDISMELVEVAKEVHLSAK 236 (454)
Q Consensus 158 ~~~~~~d~vViAtG~~~~p~-~p~i~G~~~~~~~~~~~~~~~~~~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r 236 (454)
.+.||+|||||| +.|. .|.+||.+. ..++..+.... ..+++++|||+|.+|+|+|..+++.+.+|+++.+
T Consensus 152 --~~~~d~lviAtG--~~p~~~p~i~G~~~----~~~~~~~~~~~-~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~ 222 (484)
T 3o0h_A 152 --RISAEKILIATG--AKIVSNSAIKGSDL----CLTSNEIFDLE-KLPKSIVIVGGGYIGVEFANIFHGLGVKTTLLHR 222 (484)
T ss_dssp --EEEEEEEEECCC--EEECCC--CBTGGG----SBCTTTGGGCS-SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred --EEEeCEEEEccC--CCcccCCCCCCccc----cccHHHHHhHH-hcCCcEEEECcCHHHHHHHHHHHHcCCeEEEEEC
Confidence 789999999999 8898 899999763 22222222221 2468999999999999999999999999999999
Q ss_pred cCCcCccchhh--------hc-cCCCeEEcCceeEEecCC---cEEEeCCCEEeeceEEEccCcccCCcCCC--------
Q 044575 237 SLNISEGLSKV--------IS-KHNNLHLHPQIDCLREDG---RVTFVDGCWVTADTILYCTGYSYSFPFLD-------- 296 (454)
Q Consensus 237 ~~~~~~~~~~~--------l~-~~~~i~~~~~v~~v~~~~---~v~~~dG~~i~~D~vI~atG~~~~~~~l~-------- 296 (454)
.+.+.+.+... +. ..++++.+..|+++..++ .|.+.+|+++++|.||+|+|++|+.++|.
T Consensus 223 ~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vi~A~G~~p~~~~l~l~~~g~~~ 302 (484)
T 3o0h_A 223 GDLILRNFDYDLRQLLNDAMVAKGISIIYEATVSQVQSTENCYNVVLTNGQTICADRVMLATGRVPNTTGLGLERAGVKV 302 (484)
T ss_dssp SSSSSTTSCHHHHHHHHHHHHHHTCEEESSCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEECCTTCCHHHHTCCB
T ss_pred CCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEeeCCEEEEEECCCcEEEcCEEEEeeCCCcCCCCCChhhcCceE
Confidence 98775443322 22 235788888999997543 47788999999999999999999988742
Q ss_pred -CCCceeeCCCCcccccCcccCCCCCCCceEeccccccc-chhHHHHHHHHHHHHHcCCC
Q 044575 297 -TKGIVVVDDDRVGPLYEHTFPPSLAPSLSFVGIPRKLI-GFPFFESQAKWIAQLLSGKR 354 (454)
Q Consensus 297 -~~g~i~v~~~~~~~~~~~~~~~~~~p~l~~iG~~~~~~-~~~~a~~qa~~~a~~i~g~~ 354 (454)
++|.+.+|+... ++.|++|++||+...+ ..+.|..||+.+|+++.|..
T Consensus 303 ~~~G~i~vd~~~~----------t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~~ 352 (484)
T 3o0h_A 303 NEFGAVVVDEKMT----------TNVSHIWAVGDVTGHIQLTPVAIHDAMCFVKNAFENT 352 (484)
T ss_dssp CTTSCBCCCTTSB----------CSSTTEEECGGGGTSCCCHHHHHHHHHHHHHHHHC--
T ss_pred CCCCCEeECCCCC----------CCCCCEEEEEecCCCCcCHHHHHHHHHHHHHHHcCCC
Confidence 346666665544 4579999999998744 45799999999999998863
No 64
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=99.98 E-value=9e-33 Score=278.62 Aligned_cols=290 Identities=17% Similarity=0.169 Sum_probs=198.5
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCc-cccccccceecCCccccccCCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEV-HSSVYASLRLTSPREIMGYTDFPFVLKK 90 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (454)
++||+|||||++|+++|..|++.|++|+|||+ +.+||+|.+.+|.|++.+ ........ ...+..+.++.
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~~gcip~k~l~~~~~~~~~-------~~~~~~~g~~~-- 74 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAALGKKVAIAEE-FRYGGTCVIRGCVPKKLYVYASQFAEH-------FEDAAGFGWTV-- 74 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHH-------HHHGGGGTEEE--
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCEEEEEeC-CCCCCcccccCchhhHHHHHHHHHHHH-------HHHHHhcCccc--
Confidence 48999999999999999999999999999999 789999998888766411 10000000 00111111110
Q ss_pred CCCCCCCCCHHHH-----------HHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEe-ecCCCeE
Q 044575 91 GRDVRRFPGHKEL-----------WLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSK-EKKADKV 158 (454)
Q Consensus 91 ~~~~~~~~~~~~~-----------~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~ 158 (454)
... .....++ ..++..+.++.++. +..+ ++..++ .+++.+. ++
T Consensus 75 --~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~--~~~g-~~~~i~--------------~~~v~~~~~~----- 129 (463)
T 4dna_A 75 --GES-RFDWAKLVAAKEQEIARLEGLYRKGLANAGAE--ILDT-RAELAG--------------PNTVKLLASG----- 129 (463)
T ss_dssp --CCC-EECHHHHHHHHHHHHHHHHHHHHHHHHHHTCE--EEES-CEEESS--------------SSEEEETTTT-----
T ss_pred --CCC-CcCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEEE-EEEEee--------------CCEEEEecCC-----
Confidence 000 1122222 23344444455655 3333 333332 3345552 22
Q ss_pred EEEEeCEEEEccCCCCCCC-CCCCCCcCCccceeEEeecCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEeccc
Q 044575 159 VEEVFDAVVVATGHYSYPR-LPSIKGMDKWKRKQMHSHIYRVPEPFRNEVVVVVGNSLSGQDISMELVEVAKEVHLSAKS 237 (454)
Q Consensus 159 ~~~~~d~vViAtG~~~~p~-~p~i~G~~~~~~~~~~~~~~~~~~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~ 237 (454)
..+.||+||+||| +.|. .|++||.+. ..++..+.... ..+++++|||+|.+|+|+|..+++.+.+|+++.+.
T Consensus 130 ~~~~~d~lviAtG--~~p~~~p~i~G~~~----~~~~~~~~~~~-~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~ 202 (463)
T 4dna_A 130 KTVTAERIVIAVG--GHPSPHDALPGHEL----CITSNEAFDLP-ALPESILIAGGGYIAVEFANIFHGLGVKTTLIYRG 202 (463)
T ss_dssp EEEEEEEEEECCC--EEECCCTTSTTGGG----CBCHHHHTTCS-SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred eEEEeCEEEEecC--CCcccCCCCCCccc----cccHHHHhhhh-cCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcC
Confidence 2789999999999 8999 999999763 23333333222 24689999999999999999999999999999999
Q ss_pred CCcCccchh--------hhcc-CCCeEEcCceeEEecC--C--cEE-EeCCCEEeeceEEEccCcccCCcCCC-------
Q 044575 238 LNISEGLSK--------VISK-HNNLHLHPQIDCLRED--G--RVT-FVDGCWVTADTILYCTGYSYSFPFLD------- 296 (454)
Q Consensus 238 ~~~~~~~~~--------~l~~-~~~i~~~~~v~~v~~~--~--~v~-~~dG~~i~~D~vI~atG~~~~~~~l~------- 296 (454)
+.+.+.+.. .+.+ .++++.++.|+++..+ + .|. +.+|+ +++|.||+|+|++|+.++|.
T Consensus 203 ~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g~-i~aD~Vv~a~G~~p~~~~l~l~~~g~~ 281 (463)
T 4dna_A 203 KEILSRFDQDMRRGLHAAMEEKGIRILCEDIIQSVSADADGRRVATTMKHGE-IVADQVMLALGRMPNTNGLGLEAAGVR 281 (463)
T ss_dssp SSSSTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSCEEEEESSSCE-EEESEEEECSCEEESCTTSSTGGGTCC
T ss_pred CccccccCHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCCEEEEEEcCCCe-EEeCEEEEeeCcccCCCCCCccccCce
Confidence 877544332 2222 3578888899998754 2 366 67887 99999999999999988742
Q ss_pred --CCCceeeCCCCcccccCcccCCCCCCCceEeccccccc-chhHHHHHHHHHHHHHcCCC
Q 044575 297 --TKGIVVVDDDRVGPLYEHTFPPSLAPSLSFVGIPRKLI-GFPFFESQAKWIAQLLSGKR 354 (454)
Q Consensus 297 --~~g~i~v~~~~~~~~~~~~~~~~~~p~l~~iG~~~~~~-~~~~a~~qa~~~a~~i~g~~ 354 (454)
++|.+.+|++.. ++.|++|++||+...+ ..+.|..||+++|+++.|..
T Consensus 282 ~~~~G~i~vd~~~~----------t~~~~iya~GD~~~~~~~~~~A~~~g~~aa~~i~g~~ 332 (463)
T 4dna_A 282 TNELGAIIVDAFSR----------TSTPGIYALGDVTDRVQLTPVAIHEAMCFIETEYKNN 332 (463)
T ss_dssp BCTTSCBCCCTTCB----------CSSTTEEECSGGGSSCCCHHHHHHHHHHHHHHHHSSC
T ss_pred ECCCCCEeECcCCC----------CCCCCEEEEEecCCCCCChHHHHHHHHHHHHHHcCCC
Confidence 334555555433 4579999999998754 35799999999999998864
No 65
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=99.98 E-value=2.1e-32 Score=271.54 Aligned_cols=273 Identities=18% Similarity=0.213 Sum_probs=194.5
Q ss_pred CcEEEECcChHHHHHHHHHHHcCCc--EEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCC
Q 044575 13 KNVCVIGAGPSGLVAARELRKEGHR--VVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKK 90 (454)
Q Consensus 13 ~~VvIIGaG~aGl~aA~~l~~~g~~--v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (454)
++|+|||||+||++||..|++.|++ |+|||+++..+..-. ++..... ........+
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~~~------------~l~~~~~----~g~~~~~~~------ 60 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDRP------------SLSKAVL----DGSLERPPI------ 60 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBCSG------------GGGTHHH----HTSSSSCCB------
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcCCc------------cccHHHh----CCCCCHHHh------
Confidence 4899999999999999999999986 999999876532100 0000000 000000000
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEcc
Q 044575 91 GRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVAT 170 (454)
Q Consensus 91 ~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAt 170 (454)
+. ..++.++.++. ++++++|+.++.. .++|++.++. ++.||+|||||
T Consensus 61 ------~~--------~~~~~~~~~i~--~~~~~~v~~id~~------------~~~v~~~~g~-----~~~~d~lvlAt 107 (410)
T 3ef6_A 61 ------LA--------EADWYGEARID--MLTGPEVTALDVQ------------TRTISLDDGT-----TLSADAIVIAT 107 (410)
T ss_dssp ------SS--------CTTHHHHTTCE--EEESCCEEEEETT------------TTEEEETTSC-----EEECSEEEECC
T ss_pred ------cC--------CHHHHHHCCCE--EEeCCEEEEEECC------------CCEEEECCCC-----EEECCEEEEcc
Confidence 00 11234456776 8889999999865 4567776654 78999999999
Q ss_pred CCCCCCCCCCCCCcCCccceeEEeecCCC-----CCCCCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCcCcc--
Q 044575 171 GHYSYPRLPSIKGMDKWKRKQMHSHIYRV-----PEPFRNEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNISEG-- 243 (454)
Q Consensus 171 G~~~~p~~p~i~G~~~~~~~~~~~~~~~~-----~~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~~~~-- 243 (454)
| +.|+.|++||.+... +++.....+ .....+++|+|||+|.+|+|+|..+.+.+.+|+++++.+.+.+.
T Consensus 108 G--~~p~~~~ipG~~~~~--v~~~~~~~d~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~~ 183 (410)
T 3ef6_A 108 G--SRARTMALPGSQLPG--VVTLRTYGDVQVLRDSWTSATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLVRVL 183 (410)
T ss_dssp C--EEECCCCCTTTTSTT--EECCCSHHHHHHHHHHCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSHHHH
T ss_pred C--CcccCCCCCCccccc--eEEeccHHHHHHHHHHhccCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccchhhc
Confidence 9 889999999975321 222111110 01235799999999999999999999999999999999886432
Q ss_pred ---chh----hhc-cCCCeEEcCceeEEecCC---cEEEeCCCEEeeceEEEccCcccCCcCCCCC-----CceeeCCCC
Q 044575 244 ---LSK----VIS-KHNNLHLHPQIDCLREDG---RVTFVDGCWVTADTILYCTGYSYSFPFLDTK-----GIVVVDDDR 307 (454)
Q Consensus 244 ---~~~----~l~-~~~~i~~~~~v~~v~~~~---~v~~~dG~~i~~D~vI~atG~~~~~~~l~~~-----g~i~v~~~~ 307 (454)
+.+ .+. ..++++.+..|+++..++ .|++.||+++++|.||+|+|++|+.+++... +.+.+|+..
T Consensus 184 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~dg~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~~gi~vd~~~ 263 (410)
T 3ef6_A 184 GRRIGAWLRGLLTELGVQVELGTGVVGFSGEGQLEQVMASDGRSFVADSALICVGAEPADQLARQAGLACDRGVIVDHCG 263 (410)
T ss_dssp CHHHHHHHHHHHHHHTCEEECSCCEEEEECSSSCCEEEETTSCEEECSEEEECSCEEECCHHHHHTTCCBSSSEECCTTS
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEeccCcEEEEEECCCCEEEcCEEEEeeCCeecHHHHHhCCCccCCeEEEccCe
Confidence 222 222 235788889999997654 4889999999999999999999998775421 235666554
Q ss_pred cccccCcccCCCCCCCceEecccccccc----------hhHHHHHHHHHHHHHcCCC
Q 044575 308 VGPLYEHTFPPSLAPSLSFVGIPRKLIG----------FPFFESQAKWIAQLLSGKR 354 (454)
Q Consensus 308 ~~~~~~~~~~~~~~p~l~~iG~~~~~~~----------~~~a~~qa~~~a~~i~g~~ 354 (454)
. ++.|++|++||+...+. ++.|..||+.+|++|.|+.
T Consensus 264 ~----------t~~~~IyA~GD~a~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~ 310 (410)
T 3ef6_A 264 A----------TLAKGVFAVGDVASWPLRAGGRRSLETYMNAQRQAAAVAAAILGKN 310 (410)
T ss_dssp B----------CSSTTEEECGGGEEEEBTTSSEECCCCHHHHHHHHHHHHHHHTTCC
T ss_pred e----------ECCCCEEEEEcceeccCCCCCeeeechHHHHHHHHHHHHHHHcCCC
Confidence 4 45799999999985432 5799999999999999974
No 66
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.98 E-value=1.1e-32 Score=269.23 Aligned_cols=267 Identities=21% Similarity=0.329 Sum_probs=189.4
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKKG 91 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (454)
..||+|||||+||++||..|++.| +|+|||+++..+ +..+ ..... +... ..
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~----~~~~---------~l~~~-------~~g~--~~------ 58 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPY----YSKP---------MLSHY-------IAGF--IP------ 58 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCC----CCST---------THHHH-------HTTS--SC------
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCc----cccc---------hhHHH-------HhCC--CC------
Confidence 468999999999999999999999 999999987532 1100 00000 0000 00
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccC
Q 044575 92 RDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATG 171 (454)
Q Consensus 92 ~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG 171 (454)
.+++..+..++.+++++. ++++++|+.++.. .++|+ .++. ++.||+||||||
T Consensus 59 --------~~~~~~~~~~~~~~~~v~--~~~g~~v~~id~~------------~~~V~-~~g~-----~~~~d~lViATG 110 (367)
T 1xhc_A 59 --------RNRLFPYSLDWYRKRGIE--IRLAEEAKLIDRG------------RKVVI-TEKG-----EVPYDTLVLATG 110 (367)
T ss_dssp --------GGGGCSSCHHHHHHHTEE--EECSCCEEEEETT------------TTEEE-ESSC-----EEECSEEEECCC
T ss_pred --------HHHhccCCHHHHHhCCcE--EEECCEEEEEECC------------CCEEE-ECCc-----EEECCEEEECCC
Confidence 011111223445566776 7788889998865 55676 4443 789999999999
Q ss_pred CCCCCCCCCCCCcCCccceeEEeecCCCCCCC-----CCCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCcCccchh
Q 044575 172 HYSYPRLPSIKGMDKWKRKQMHSHIYRVPEPF-----RNEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNISEGLSK 246 (454)
Q Consensus 172 ~~~~p~~p~i~G~~~~~~~~~~~~~~~~~~~~-----~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~~~~~~~ 246 (454)
+.|+.|++||.+ .+++...+.+...+ ++++++|||+|.+|+|+|..|++.|.+|+++++.+.+.+ +.+
T Consensus 111 --s~p~~p~i~G~~----~v~~~~~~~~~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-~~~ 183 (367)
T 1xhc_A 111 --ARAREPQIKGKE----YLLTLRTIFDADRIKESIENSGEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG-LDE 183 (367)
T ss_dssp --EEECCCCSBTGG----GEECCCSHHHHHHHHHHHHHHSEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT-CCH
T ss_pred --CCCCCCCCCCcC----CEEEEcCHHHHHHHHHHhhcCCcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc-CCH
Confidence 899999999832 23333222111111 358999999999999999999999999999999988755 332
Q ss_pred --------hhcc-CCCeEEcCceeEEecCCcEEEeCCCEEeeceEEEccCcccCCcCCCCC-----CceeeCCCCccccc
Q 044575 247 --------VISK-HNNLHLHPQIDCLREDGRVTFVDGCWVTADTILYCTGYSYSFPFLDTK-----GIVVVDDDRVGPLY 312 (454)
Q Consensus 247 --------~l~~-~~~i~~~~~v~~v~~~~~v~~~dG~~i~~D~vI~atG~~~~~~~l~~~-----g~i~v~~~~~~~~~ 312 (454)
.+.+ .++++.++.|+++..+ .|+++||+ +++|.||+|+|++|+.+++... +.+.+|+..+
T Consensus 184 ~~~~~l~~~l~~~gV~i~~~~~v~~i~~~-~v~~~~g~-i~~D~vi~a~G~~p~~~ll~~~gl~~~~gi~Vd~~~~---- 257 (367)
T 1xhc_A 184 ELSNMIKDMLEETGVKFFLNSELLEANEE-GVLTNSGF-IEGKVKICAIGIVPNVDLARRSGIHTGRGILIDDNFR---- 257 (367)
T ss_dssp HHHHHHHHHHHHTTEEEECSCCEEEECSS-EEEETTEE-EECSCEEEECCEEECCHHHHHTTCCBSSSEECCTTSB----
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEEEEee-EEEECCCE-EEcCEEEECcCCCcCHHHHHhCCCCCCCCEEECCCcc----
Confidence 2222 3477888899999744 58898988 9999999999999998764321 2355665443
Q ss_pred CcccCCCCCCCceEecccccc-----cchhHHHHHHHHHHHHHcCCC
Q 044575 313 EHTFPPSLAPSLSFVGIPRKL-----IGFPFFESQAKWIAQLLSGKR 354 (454)
Q Consensus 313 ~~~~~~~~~p~l~~iG~~~~~-----~~~~~a~~qa~~~a~~i~g~~ 354 (454)
++.|++|++||+... ..++.|..||+.+|+++.|+.
T Consensus 258 ------t~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~g~~ 298 (367)
T 1xhc_A 258 ------TSAKDVYAIGDCAEYSGIIAGTAKAAMEQARVLADILKGEP 298 (367)
T ss_dssp ------CSSTTEEECGGGEEBTTBCCCSHHHHHHHHHHHHHHHTTCC
T ss_pred ------cCCCCEEEeEeeeecCCCCccHHHHHHHHHHHHHHHhcCCC
Confidence 356999999999642 245799999999999999863
No 67
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=99.98 E-value=1.7e-32 Score=278.38 Aligned_cols=298 Identities=20% Similarity=0.247 Sum_probs=198.5
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEee--------CCCCCcccccCCCCCCCCc-cccccccceecCCccccccC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQ--------NHDVGGQWLYDPNTDQTEV-HSSVYASLRLTSPREIMGYT 82 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~--------~~~~GG~w~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 82 (454)
.+||+||||||||++||..|++.|.+|+|||+ ...+||+|.+.+|.|++.+ .+...... .....
T Consensus 6 ~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~-------~~~~~ 78 (488)
T 3dgz_A 6 SFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGM-------IRDAH 78 (488)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHH-------HHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHH-------HHHHH
Confidence 58999999999999999999999999999997 5679999999998876521 11100000 00011
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-----------CCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEe
Q 044575 83 DFPFVLKKGRDVRRFPGHKELWLYLKDFCQRF-----------GLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSK 151 (454)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~-----------~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~ 151 (454)
.+.+.. .........++.++.+++.+++ ++. .+..++..++ .. .+.|...
T Consensus 79 ~~g~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~---~i~g~~~~~~---~~---------~v~v~~~ 139 (488)
T 3dgz_A 79 HYGWEV----AQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVK---YFNIKASFVD---EH---------TVRGVDK 139 (488)
T ss_dssp HTTCCC----CSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCE---EECCEEEESS---SS---------EEEEECT
T ss_pred hcCccc----CCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE---EEEEEEEEcc---CC---------eEEEEeC
Confidence 121111 1122345566666655544432 332 2233333322 11 4444432
Q ss_pred ecCCCeEEEEEeCEEEEccCCCCCCCCCC-CCCcCCccceeEEeecCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhhcCe
Q 044575 152 EKKADKVVEEVFDAVVVATGHYSYPRLPS-IKGMDKWKRKQMHSHIYRVPEPFRNEVVVVVGNSLSGQDISMELVEVAKE 230 (454)
Q Consensus 152 ~~~~~~~~~~~~d~vViAtG~~~~p~~p~-i~G~~~~~~~~~~~~~~~~~~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~ 230 (454)
+ +...++.||+|||||| +.|..|+ +||.+.. .+++..+.... ..+++++|||+|.+|+|+|..+++.|.+
T Consensus 140 ~---g~~~~~~~d~lViATG--s~p~~p~~i~G~~~~---~~~~~~~~~~~-~~~~~vvViGgG~ig~E~A~~l~~~g~~ 210 (488)
T 3dgz_A 140 G---GKATLLSAEHIVIATG--GRPRYPTQVKGALEY---GITSDDIFWLK-ESPGKTLVVGASYVALECAGFLTGIGLD 210 (488)
T ss_dssp T---SCEEEEEEEEEEECCC--EEECCCSSCBTHHHH---CBCHHHHTTCS-SCCCSEEEECCSHHHHHHHHHHHHTTCC
T ss_pred C---CceEEEECCEEEEcCC--CCCCCCCCCCCcccc---cCcHHHHHhhh-hcCCeEEEECCCHHHHHHHHHHHHcCCc
Confidence 2 3345789999999999 8999998 9997542 23343333222 2457899999999999999999999999
Q ss_pred EEEecccCCc---Cccch----hhhcc-CCCeEEcCceeEEec--CC--cEEEeC---CC--EEeeceEEEccCcccCCc
Q 044575 231 VHLSAKSLNI---SEGLS----KVISK-HNNLHLHPQIDCLRE--DG--RVTFVD---GC--WVTADTILYCTGYSYSFP 293 (454)
Q Consensus 231 V~l~~r~~~~---~~~~~----~~l~~-~~~i~~~~~v~~v~~--~~--~v~~~d---G~--~i~~D~vI~atG~~~~~~ 293 (454)
|+++.+...+ .+.+. +.+.+ .++++.+..++++.. ++ .|.+.+ |+ ++++|.||+|+|++|+.+
T Consensus 211 Vtlv~~~~~l~~~d~~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~p~~~ 290 (488)
T 3dgz_A 211 TTVMMRSIPLRGFDQQMSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRVPETR 290 (488)
T ss_dssp EEEEESSCSSTTSCHHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSCEEESCG
T ss_pred eEEEEcCcccccCCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccCCcccC
Confidence 9999986432 12222 22332 357888888888864 22 356655 55 468999999999999988
Q ss_pred CCC----------CCCceeeCCCCcccccCcccCCCCCCCceEeccccc-c-cchhHHHHHHHHHHHHHcCCC
Q 044575 294 FLD----------TKGIVVVDDDRVGPLYEHTFPPSLAPSLSFVGIPRK-L-IGFPFFESQAKWIAQLLSGKR 354 (454)
Q Consensus 294 ~l~----------~~g~i~v~~~~~~~~~~~~~~~~~~p~l~~iG~~~~-~-~~~~~a~~qa~~~a~~i~g~~ 354 (454)
++. ++|.+.+|++.+ ++.|++|++||+.. . ...+.|..||+.+|.++.|..
T Consensus 291 ~l~l~~~g~~~~~~~G~i~vd~~~~----------t~~~~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i~g~~ 353 (488)
T 3dgz_A 291 TLNLEKAGISTNPKNQKIIVDAQEA----------TSVPHIYAIGDVAEGRPELTPTAIKAGKLLAQRLFGKS 353 (488)
T ss_dssp GGTGGGGTCCBCSSSCCBCCCTTSB----------CSSTTEEECGGGBTTCCCCHHHHHHHHHHHHHHHHSCC
T ss_pred cCCccccCcEecCCCCeEeECCCCc----------cCCCCEEEeEEecCCCCcchhHHHHHHHHHHHHHcCCC
Confidence 742 245555555443 45799999999963 2 345789999999999998864
No 68
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=99.98 E-value=1.5e-31 Score=271.37 Aligned_cols=280 Identities=18% Similarity=0.234 Sum_probs=193.7
Q ss_pred CCcEEEECcChHHHHHHHHHHHcC---CcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEG---HRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVL 88 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g---~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (454)
.+||+|||||+||+++|..|++.| .+|+|||+++.++..+... +.+..-....+
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~----------~~~~~~~~~~~------------- 91 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAGM----------ALWIGEQIAGP------------- 91 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGGH----------HHHHTTSSSCS-------------
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCcccccc----------chhhcCccCCH-------------
Confidence 489999999999999999999987 9999999987665322100 00000000000
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEE
Q 044575 89 KKGRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVV 168 (454)
Q Consensus 89 ~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVi 168 (454)
+++.....+.++++++. ++++++|..|+..+. .+++.. ++ ...++.||+|||
T Consensus 92 ------------~~~~~~~~~~~~~~gv~--v~~~~~v~~i~~~~~----------~v~v~~-~g---~~~~~~~d~lvi 143 (490)
T 2bc0_A 92 ------------EGLFYSDKEELESLGAK--VYMESPVQSIDYDAK----------TVTALV-DG---KNHVETYDKLIF 143 (490)
T ss_dssp ------------GGGBSCCHHHHHHTTCE--EETTCCEEEEETTTT----------EEEEEE-TT---EEEEEECSEEEE
T ss_pred ------------HHhhhcCHHHHHhCCCE--EEeCCEEEEEECCCC----------EEEEEe-CC---cEEEEECCEEEE
Confidence 00000112334556776 778999999986532 444431 21 233789999999
Q ss_pred ccCCCCCCCCCCCCCcC------Ccc---ceeEEeecCCCC-------CCCCCCeEEEEcCCCCHHHHHHHHhhhcCeEE
Q 044575 169 ATGHYSYPRLPSIKGMD------KWK---RKQMHSHIYRVP-------EPFRNEVVVVVGNSLSGQDISMELVEVAKEVH 232 (454)
Q Consensus 169 AtG~~~~p~~p~i~G~~------~~~---~~~~~~~~~~~~-------~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~ 232 (454)
||| +.|..|++||.+ .|. ..+++...+.+. ....+++|+|||+|.+|+|+|..|++.|.+|+
T Consensus 144 AtG--~~p~~p~i~G~~~~~~~~~f~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~ig~E~A~~l~~~g~~Vt 221 (490)
T 2bc0_A 144 ATG--SQPILPPIKGAEIKEGSLEFEATLENLQFVKLYQNSADVIAKLENKDIKRVAVVGAGYIGVELAEAFQRKGKEVV 221 (490)
T ss_dssp CCC--EEECCCSCBTCCBCTTCTTCCBSSTTEEECSSHHHHHHHHHHTTSTTCCEEEEECCSHHHHHHHHHHHHTTCEEE
T ss_pred CCC--CCcCCCCCCCccccccccccccccCCEEEeCCHHHHHHHHHHhhhcCCceEEEECCCHHHHHHHHHHHHCCCeEE
Confidence 999 899999999986 332 124443222111 11467999999999999999999999999999
Q ss_pred EecccCCcCc-cch--------hhhcc-CCCeEEcCceeEEecCCc--EEEeCCCEEeeceEEEccCcccCCcCCCC---
Q 044575 233 LSAKSLNISE-GLS--------KVISK-HNNLHLHPQIDCLREDGR--VTFVDGCWVTADTILYCTGYSYSFPFLDT--- 297 (454)
Q Consensus 233 l~~r~~~~~~-~~~--------~~l~~-~~~i~~~~~v~~v~~~~~--v~~~dG~~i~~D~vI~atG~~~~~~~l~~--- 297 (454)
++++.+.+.+ .+. +.+.+ .++++.+..|+++..++. .+..+|+++++|.||+|+|++|++++++.
T Consensus 222 lv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~v~~v~~~g~~i~~D~Vi~a~G~~p~~~ll~~~l~ 301 (490)
T 2bc0_A 222 LIDVVDTCLAGYYDRDLTDLMAKNMEEHGIQLAFGETVKEVAGNGKVEKIITDKNEYDVDMVILAVGFRPNTTLGNGKID 301 (490)
T ss_dssp EEESSSSTTTTTSCHHHHHHHHHHHHTTTCEEEETCCEEEEECSSSCCEEEESSCEEECSEEEECCCEEECCGGGTTCSC
T ss_pred EEEcccchhhhHHHHHHHHHHHHHHHhCCeEEEeCCEEEEEEcCCcEEEEEECCcEEECCEEEECCCCCcChHHHHhhhc
Confidence 9999987754 222 22333 357888999999976542 23348889999999999999999987653
Q ss_pred ---CCceeeCCCCcccccCcccCCCCCCCceEecccccc-----------cchhHHHHHHHHHHHHHcCCC
Q 044575 298 ---KGIVVVDDDRVGPLYEHTFPPSLAPSLSFVGIPRKL-----------IGFPFFESQAKWIAQLLSGKR 354 (454)
Q Consensus 298 ---~g~i~v~~~~~~~~~~~~~~~~~~p~l~~iG~~~~~-----------~~~~~a~~qa~~~a~~i~g~~ 354 (454)
+|.+.+|++.+ ++.|++|++||+... ...+.|..||+.+|.++.|..
T Consensus 302 ~~~~G~I~Vd~~~~----------t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~ 362 (490)
T 2bc0_A 302 LFRNGAFLVNKRQE----------TSIPGVYAIGDCATIYDNATRDTNYIALASNAVRTGIVAAHNACGTD 362 (490)
T ss_dssp BCTTSCBCCCTTCB----------CSSTTEEECGGGBCEEETTTTEEECCCCHHHHHHHHHHHHHHHTTCC
T ss_pred cCCCCCEEECCCcc----------cCCCCEEEeeeeEEeccccCCceeecccHHHHHHHHHHHHHHhcCCC
Confidence 34444444433 356999999999853 245789999999999999864
No 69
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.98 E-value=1.7e-31 Score=269.53 Aligned_cols=319 Identities=16% Similarity=0.211 Sum_probs=206.3
Q ss_pred CCcEEEECcChHHHHHHHHHHHcC-----CcEEEEeeCCCCCcccccCCCCCCCCccccccccc-eecCCccccccCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEG-----HRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASL-RLTSPREIMGYTDFP 85 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g-----~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 85 (454)
.+||+|||||++|+++|..|++.| .+|+|||+++.+| |......+...+..+.+..+ ....|...+.|.++.
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g--~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l 107 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYR--WHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYL 107 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCC--SSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCC--CcCCCCCCCCcCCcchhhccccccCCCCCCChhHhh
Confidence 469999999999999999999999 9999999999887 54321111110100000000 111122111111000
Q ss_pred CCCCC----CCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcE--EEEEeecCCCeEE
Q 044575 86 FVLKK----GRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKW--VVKSKEKKADKVV 159 (454)
Q Consensus 86 ~~~~~----~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~ 159 (454)
..... ......|+++.++.+|+.+++++++.. ++++++|++|+..++.. . .| +|++.++. +...
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--i~~~~~V~~i~~~~~~~------~-~~~~~V~~~~g~-g~~~ 177 (463)
T 3s5w_A 108 HKHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQ--SRYGEEVLRIEPMLSAG------Q-VEALRVISRNAD-GEEL 177 (463)
T ss_dssp HHTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTT--EEESEEEEEEEEEEETT------E-EEEEEEEEEETT-SCEE
T ss_pred hhcCceeecccccCCCCCHHHHHHHHHHHHHHcCCe--EEeCCEEEEEEEecCCC------c-eEEEEEEEecCC-CceE
Confidence 00000 002345678899999999999998866 99999999998763210 0 45 66666653 4455
Q ss_pred EEEeCEEEEccCCCCCCCCCCCCCcCCccc--eeEEeecCCC-CCCC-----CCCeEEEEcCCCCHHHHHHHHhhh--cC
Q 044575 160 EEVFDAVVVATGHYSYPRLPSIKGMDKWKR--KQMHSHIYRV-PEPF-----RNEVVVVVGNSLSGQDISMELVEV--AK 229 (454)
Q Consensus 160 ~~~~d~vViAtG~~~~p~~p~i~G~~~~~~--~~~~~~~~~~-~~~~-----~~k~vvVVG~G~sg~e~A~~l~~~--~~ 229 (454)
++.||+||+||| +.|.+|. +++.+.+ ..+|+..+.. ...+ ++++|+|||+|.+|+|+|..|++. +.
T Consensus 178 ~~~~d~lVlAtG--~~p~~p~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~sg~e~a~~l~~~~~~~ 253 (463)
T 3s5w_A 178 VRTTRALVVSPG--GTPRIPQ--VFRALKGDGRVFHHSQYLEHMAKQPCSSGKPMKIAIIGGGQSAAEAFIDLNDSYPSV 253 (463)
T ss_dssp EEEESEEEECCC--CEECCCG--GGGGGTTCTTEEEGGGHHHHHCC-------CEEEEEECCSHHHHHHHHHHHHHCTTE
T ss_pred EEEeCEEEECCC--CCCCCcc--hhhhcCCCCcEEECHHHHhhHHHhhhcccCCCeEEEECCCHhHHHHHHHHHhcCCCC
Confidence 789999999999 7888775 2334444 6788877644 2333 589999999999999999999999 99
Q ss_pred eEEEecccCCcCcc----------------------------chhhhc---------------------------cCCCe
Q 044575 230 EVHLSAKSLNISEG----------------------------LSKVIS---------------------------KHNNL 254 (454)
Q Consensus 230 ~V~l~~r~~~~~~~----------------------------~~~~l~---------------------------~~~~i 254 (454)
+|+++.|++.+.+. +.+... ....+
T Consensus 254 ~Vt~v~r~~~~~p~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i 333 (463)
T 3s5w_A 254 QADMILRASALKPADDSPFVNEVFAPKFTDLIYSREHAERERLLREYHNTNYSVVDTDLIERIYGVFYRQKVSGIPRHAF 333 (463)
T ss_dssp EEEEECSSSSCCBCCCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHHHHHHHHCCCCSEE
T ss_pred eEEEEEeCCCCcCccCCccchhccChhHHHHHhcCCHHHHHHHHHHhhccCCCcCCHHHHHHHHHHHHHHHhcCCCCeEE
Confidence 99999999866321 000000 13456
Q ss_pred EEcCceeEEecCC---cEEEe---CCCE--EeeceEEEccCcccC--CcCCCCC----CceeeCCCCcccccCcccCCCC
Q 044575 255 HLHPQIDCLREDG---RVTFV---DGCW--VTADTILYCTGYSYS--FPFLDTK----GIVVVDDDRVGPLYEHTFPPSL 320 (454)
Q Consensus 255 ~~~~~v~~v~~~~---~v~~~---dG~~--i~~D~vI~atG~~~~--~~~l~~~----g~i~v~~~~~~~~~~~~~~~~~ 320 (454)
+.++.|+++..++ .|.+. +|+. +++|.||+|||++|+ .++|..- |.+.+|++...... ...
T Consensus 334 ~~~~~v~~v~~~~~~~~v~~~~~~~g~~~~~~~D~Vv~AtG~~p~~~~~~l~~l~~~~g~i~v~~~~~~~~~-----~~~ 408 (463)
T 3s5w_A 334 RCMTTVERATATAQGIELALRDAGSGELSVETYDAVILATGYERQLHRQLLEPLAEYLGDHEIGRDYRLQTD-----ERC 408 (463)
T ss_dssp ETTEEEEEEEEETTEEEEEEEETTTCCEEEEEESEEEECCCEECCC-CTTTGGGGGGBC--CCCTTSBCCBC-----TTB
T ss_pred EeCCEEEEEEecCCEEEEEEEEcCCCCeEEEECCEEEEeeCCCCCCccchhHHHHHHhCCcccCcccccccC-----CCC
Confidence 7777888886433 36666 7775 889999999999999 6776532 56677765543211 112
Q ss_pred CCCceEecccccc-----cch-hHHHHHHHHHHHHHc
Q 044575 321 APSLSFVGIPRKL-----IGF-PFFESQAKWIAQLLS 351 (454)
Q Consensus 321 ~p~l~~iG~~~~~-----~~~-~~a~~qa~~~a~~i~ 351 (454)
.|+||++|++... +.+ -.|..++++++.++.
T Consensus 409 ~~~Ifa~G~~~~~~g~~~~~l~~~a~r~~~i~~~~~~ 445 (463)
T 3s5w_A 409 KVAIYAQGFSQASHGLSDTLLSVLPVRAEEISGSLYQ 445 (463)
T ss_dssp CSEEEESSCCHHHHCTTTTSSTTHHHHHHHHHHHHHH
T ss_pred CCeEEEcCCCcccCCcCccchhHHHHHHHHHHHHHHh
Confidence 4789999998742 112 366677777766553
No 70
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=99.97 E-value=5.5e-32 Score=274.34 Aligned_cols=298 Identities=19% Similarity=0.203 Sum_probs=199.8
Q ss_pred cCCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeC---C------CCCcccccCCCCCCCCccc-cccccceecCCcccc
Q 044575 10 AQSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQN---H------DVGGQWLYDPNTDQTEVHS-SVYASLRLTSPREIM 79 (454)
Q Consensus 10 ~~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~---~------~~GG~w~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 79 (454)
...+||+||||||||++||..|++.|++|+|||+. + .+||+|.+.+|.|++.+.. ........
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~------- 79 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVH------- 79 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHH-------
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHH-------
Confidence 34689999999999999999999999999999942 1 3899999998877652111 00000000
Q ss_pred ccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-----------CCCccEEeCeEEEEEEEcCCCccccCCcCCcEEE
Q 044575 80 GYTDFPFVLKKGRDVRRFPGHKELWLYLKDFCQRF-----------GLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVV 148 (454)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~-----------~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v 148 (454)
....+.+.. .........++.++...+.+.+ ++. .+...+..++.. .+.|
T Consensus 80 ~~~~~g~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~---~~~g~a~~~~~~------------~v~v 140 (483)
T 3dgh_A 80 EAAAYGWNV----DDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVE---YINGLGSFVDSH------------TLLA 140 (483)
T ss_dssp HHHHTTBCC----CCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCE---EECSEEEEEETT------------EEEE
T ss_pred HHHhcCccc----CCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE---EEEeEEEEccCC------------EEEE
Confidence 001111111 1112345566666665554432 332 223333333211 4455
Q ss_pred EEeecCCCeEEEEEeCEEEEccCCCCCCCCCCCCCcCCccceeEEeecCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhhc
Q 044575 149 KSKEKKADKVVEEVFDAVVVATGHYSYPRLPSIKGMDKWKRKQMHSHIYRVPEPFRNEVVVVVGNSLSGQDISMELVEVA 228 (454)
Q Consensus 149 ~~~~~~~~~~~~~~~d~vViAtG~~~~p~~p~i~G~~~~~~~~~~~~~~~~~~~~~~k~vvVVG~G~sg~e~A~~l~~~~ 228 (454)
...++ . .++.||+|||||| +.|..|++||.+.. .+++..+.... ..+++++|||+|.+|+|+|..+++.|
T Consensus 141 ~~~~g---~-~~~~~d~lviATG--s~p~~p~i~G~~~~---~~~~~~~~~~~-~~~~~vvViGgG~~g~E~A~~l~~~g 210 (483)
T 3dgh_A 141 KLKSG---E-RTITAQTFVIAVG--GRPRYPDIPGAVEY---GITSDDLFSLD-REPGKTLVVGAGYIGLECAGFLKGLG 210 (483)
T ss_dssp ECTTC---C-EEEEEEEEEECCC--EEECCCSSTTHHHH---CBCHHHHTTCS-SCCCEEEEECCSHHHHHHHHHHHHTT
T ss_pred EeCCC---e-EEEEcCEEEEeCC--CCcCCCCCCCcccc---cCcHHHHhhhh-hcCCcEEEECCCHHHHHHHHHHHHcC
Confidence 44322 1 4689999999999 89999999997542 23333333222 24589999999999999999999999
Q ss_pred CeEEEecccCCcCccch--------hhhcc-CCCeEEcCceeEEec--CC--cEEEeCCC-----EEeeceEEEccCccc
Q 044575 229 KEVHLSAKSLNISEGLS--------KVISK-HNNLHLHPQIDCLRE--DG--RVTFVDGC-----WVTADTILYCTGYSY 290 (454)
Q Consensus 229 ~~V~l~~r~~~~~~~~~--------~~l~~-~~~i~~~~~v~~v~~--~~--~v~~~dG~-----~i~~D~vI~atG~~~ 290 (454)
.+|+++.|. .+.+.++ +.+.+ .++++.+..|+++.. ++ .|++.+++ ++++|.||+|+|++|
T Consensus 211 ~~Vtlv~~~-~~l~~~d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p 289 (483)
T 3dgh_A 211 YEPTVMVRS-IVLRGFDQQMAELVAASMEERGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKG 289 (483)
T ss_dssp CEEEEEESS-CSSTTSCHHHHHHHHHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCEEE
T ss_pred CEEEEEeCC-CCCcccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECccccc
Confidence 999999985 3333222 22333 358888889999874 22 36777765 688999999999999
Q ss_pred CCcCCC--C------CCceeeCCCCcccccCcccCCCCCCCceEeccccc--ccchhHHHHHHHHHHHHHcCCC
Q 044575 291 SFPFLD--T------KGIVVVDDDRVGPLYEHTFPPSLAPSLSFVGIPRK--LIGFPFFESQAKWIAQLLSGKR 354 (454)
Q Consensus 291 ~~~~l~--~------~g~i~v~~~~~~~~~~~~~~~~~~p~l~~iG~~~~--~~~~~~a~~qa~~~a~~i~g~~ 354 (454)
+.+++. . .|.+.+|++.. ++.|++|++||+.. ....+.|..||+.+|+++.|..
T Consensus 290 ~~~~l~l~~~gl~~~~G~i~vd~~~~----------t~~~~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i~g~~ 353 (483)
T 3dgh_A 290 LVDDLNLPNAGVTVQKDKIPVDSQEA----------TNVANIYAVGDIIYGKPELTPVAVLAGRLLARRLYGGS 353 (483)
T ss_dssp CCGGGTGGGTTCCCBTTBBCCCTTCB----------CSSTTEEECSTTBTTSCCCHHHHHHHHHHHHHHHHSCC
T ss_pred CcCcCCchhcCccccCCEEEECcCCc----------cCCCCEEEEEcccCCCCccHHHHHHHHHHHHHHHcCCC
Confidence 988762 1 15555555443 45799999999973 2345899999999999998864
No 71
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=99.97 E-value=7.9e-32 Score=267.01 Aligned_cols=275 Identities=16% Similarity=0.173 Sum_probs=191.4
Q ss_pred CcEEEECcChHHHHHHHHHHHcCC--cEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCC
Q 044575 13 KNVCVIGAGPSGLVAARELRKEGH--RVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKK 90 (454)
Q Consensus 13 ~~VvIIGaG~aGl~aA~~l~~~g~--~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (454)
++|+|||||+||++||.+|++.|+ +|+|||+++..+..-. ..++..+... ..
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~--------------------~l~~~~l~~~-~~----- 55 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRP--------------------PLSKAYLKSG-GD----- 55 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCSG--------------------GGGTGGGGSC-CC-----
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCCc--------------------cCCHHHHCCC-CC-----
Confidence 689999999999999999999998 8999999875421100 0000000000 00
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEcc
Q 044575 91 GRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVAT 170 (454)
Q Consensus 91 ~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAt 170 (454)
. .++..+..++..+.++. +.. ++|++++.. .++|++.++. ++.||+||+||
T Consensus 56 ---~------~~~~~~~~~~~~~~~i~--~~~-~~v~~id~~------------~~~v~~~~g~-----~~~~d~lvlAt 106 (404)
T 3fg2_P 56 ---P------NSLMFRPEKFFQDQAIE--LIS-DRMVSIDRE------------GRKLLLASGT-----AIEYGHLVLAT 106 (404)
T ss_dssp ---T------TSSBSSCHHHHHHTTEE--EEC-CCEEEEETT------------TTEEEESSSC-----EEECSEEEECC
T ss_pred ---H------HHccCCCHHHHHhCCCE--EEE-EEEEEEECC------------CCEEEECCCC-----EEECCEEEEee
Confidence 0 00001112344556665 666 889888765 4467776654 78999999999
Q ss_pred CCCCCCCCCCCCCcCCcccee---EEeecCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCcCcc----
Q 044575 171 GHYSYPRLPSIKGMDKWKRKQ---MHSHIYRVPEPFRNEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNISEG---- 243 (454)
Q Consensus 171 G~~~~p~~p~i~G~~~~~~~~---~~~~~~~~~~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~~~~---- 243 (454)
| +.|+.|++||.+...... .+...........+++|+|||+|.+|+|+|..+.+.+.+|+++++.+.+.+.
T Consensus 107 G--~~p~~~~i~g~~~~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~~~~ 184 (404)
T 3fg2_P 107 G--ARNRMLDVPNASLPDVLYLRTLDESEVLRQRMPDKKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMARVVTP 184 (404)
T ss_dssp C--EEECCCCSTTTTSTTEECCSSHHHHHHHHHHGGGCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTTSCH
T ss_pred C--CCccCCCCCCCCCCcEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhhccCH
Confidence 9 889999999865311110 1111000011124789999999999999999999999999999998876432
Q ss_pred -ch----hhhcc-CCCeEEcCceeEEecCC----cEEEeCCCEEeeceEEEccCcccCCcCCCC-----CCceeeCCCCc
Q 044575 244 -LS----KVISK-HNNLHLHPQIDCLREDG----RVTFVDGCWVTADTILYCTGYSYSFPFLDT-----KGIVVVDDDRV 308 (454)
Q Consensus 244 -~~----~~l~~-~~~i~~~~~v~~v~~~~----~v~~~dG~~i~~D~vI~atG~~~~~~~l~~-----~g~i~v~~~~~ 308 (454)
+. +.+.+ .++++.+..|+++..++ .|.+.||+++++|.||+|||++|+.+++.. .+.+.+|+...
T Consensus 185 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~~Gi~vd~~~~ 264 (404)
T 3fg2_P 185 EISSYFHDRHSGAGIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVVVGVGVIPNVEIAAAAGLPTAAGIIVDQQLL 264 (404)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSEEEECCCEEECCHHHHHTTCCBSSSEEECTTSB
T ss_pred HHHHHHHHHHHhCCcEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECcCCccCHHHHHhCCCCCCCCEEECCCcc
Confidence 22 22222 35788888999987542 478899999999999999999999876532 12366666544
Q ss_pred ccccCcccCCCCCCCceEecccccccc-----------hhHHHHHHHHHHHHHcCCC
Q 044575 309 GPLYEHTFPPSLAPSLSFVGIPRKLIG-----------FPFFESQAKWIAQLLSGKR 354 (454)
Q Consensus 309 ~~~~~~~~~~~~~p~l~~iG~~~~~~~-----------~~~a~~qa~~~a~~i~g~~ 354 (454)
++.|++|++|++...+. ++.|..||+.+|++|.|+.
T Consensus 265 ----------t~~~~iya~GD~a~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~ 311 (404)
T 3fg2_P 265 ----------TSDPHISAIGDCALFESVRFGETMRVESVQNATDQARCVAARLTGDA 311 (404)
T ss_dssp ----------CSSTTEEECGGGEEEEETTTTEEECCCSHHHHHHHHHHHHHHTTTCC
T ss_pred ----------cCCCCEEEeecceeecCccCCceeeehHHHHHHHHHHHHHHHhCCCC
Confidence 45699999999986432 5789999999999999974
No 72
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=99.97 E-value=1.1e-31 Score=266.08 Aligned_cols=271 Identities=15% Similarity=0.160 Sum_probs=192.2
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCC--cEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGH--RVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVL 88 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~--~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (454)
..+||+|||||+||+++|..|++.|. +|+|||+++.++.. .+. . ++.+.. ... +.
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~----~~~---------~-------~~~~~~-~~~--~~ 62 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYD----RPP---------L-------SKDFMA-HGD--AE 62 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCCBC----SGG---------G-------GTHHHH-HCC--GG
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCccc----CCC---------C-------CHHHhC-CCc--hh
Confidence 35899999999999999999999987 59999998754311 000 0 000000 000 00
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEE
Q 044575 89 KKGRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVV 168 (454)
Q Consensus 89 ~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVi 168 (454)
. . ++. .++++++. ++++++|+.++.. .++|++.++. ++.||+||+
T Consensus 63 ----~--~---------~~~-~~~~~~v~--~~~~~~v~~i~~~------------~~~v~~~~g~-----~~~~d~lvi 107 (408)
T 2gqw_A 63 ----K--I---------RLD-CKRAPEVE--WLLGVTAQSFDPQ------------AHTVALSDGR-----TLPYGTLVL 107 (408)
T ss_dssp ----G--S---------BCC-CTTSCSCE--EEETCCEEEEETT------------TTEEEETTSC-----EEECSEEEE
T ss_pred ----h--h---------hHH-HHHHCCCE--EEcCCEEEEEECC------------CCEEEECCCC-----EEECCEEEE
Confidence 0 0 000 12234555 7888889998764 5678776554 789999999
Q ss_pred ccCCCCCCCCCCC-CCcCCccceeEEeecCCC-----CCCCCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCcCc
Q 044575 169 ATGHYSYPRLPSI-KGMDKWKRKQMHSHIYRV-----PEPFRNEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNISE 242 (454)
Q Consensus 169 AtG~~~~p~~p~i-~G~~~~~~~~~~~~~~~~-----~~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~~~ 242 (454)
||| +.|+.|++ ||.+ .+ +++.....+ .....+++|+|||+|.+|+|+|..|++.|.+|+++++.+.+.+
T Consensus 108 AtG--~~~~~~~i~~G~~--~~-v~~~~~~~~~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 182 (408)
T 2gqw_A 108 ATG--AAPRALPTLQGAT--MP-VHTLRTLEDARRIQAGLRPQSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMS 182 (408)
T ss_dssp CCC--EEECCCGGGTTCS--SC-EEECCSHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST
T ss_pred CCC--CCCCCCCccCCCC--Cc-EEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccc
Confidence 999 88999988 9875 22 322221111 1112479999999999999999999999999999999987654
Q ss_pred c-ch--------hhhcc-CCCeEEcCceeEEecCCcEEEeCCCEEeeceEEEccCcccCCcCCCC-----CCceeeCCCC
Q 044575 243 G-LS--------KVISK-HNNLHLHPQIDCLREDGRVTFVDGCWVTADTILYCTGYSYSFPFLDT-----KGIVVVDDDR 307 (454)
Q Consensus 243 ~-~~--------~~l~~-~~~i~~~~~v~~v~~~~~v~~~dG~~i~~D~vI~atG~~~~~~~l~~-----~g~i~v~~~~ 307 (454)
. +. +.+.+ .++++.+..|+++. ++.|++.||+++++|.||+|+|++|+.+++.. ++.+.+|++.
T Consensus 183 ~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~-~~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~gl~~~~gi~Vd~~~ 261 (408)
T 2gqw_A 183 RAAPATLADFVARYHAAQGVDLRFERSVTGSV-DGVVLLDDGTRIAADMVVVGIGVLANDALARAAGLACDDGIFVDAYG 261 (408)
T ss_dssp TTSCHHHHHHHHHHHHHTTCEEEESCCEEEEE-TTEEEETTSCEEECSEEEECSCEEECCHHHHHHTCCBSSSEECCTTC
T ss_pred cccCHHHHHHHHHHHHHcCcEEEeCCEEEEEE-CCEEEECCCCEEEcCEEEECcCCCccHHHHHhCCCCCCCCEEECCCC
Confidence 2 22 22322 35788899999998 44788999999999999999999999877532 1226666654
Q ss_pred cccccCcccCCCCCCCceEeccccccc-----------chhHHHHHHHHHHHHHcCCCC
Q 044575 308 VGPLYEHTFPPSLAPSLSFVGIPRKLI-----------GFPFFESQAKWIAQLLSGKRT 355 (454)
Q Consensus 308 ~~~~~~~~~~~~~~p~l~~iG~~~~~~-----------~~~~a~~qa~~~a~~i~g~~~ 355 (454)
+ ++.|++|++||+...+ .++.|..||+++|++|.|+..
T Consensus 262 ~----------t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~ 310 (408)
T 2gqw_A 262 R----------TTCPDVYALGDVTRQRNPLSGRFERIETWSNAQNQGIAVARHLVDPTA 310 (408)
T ss_dssp B----------CSSTTEEECGGGEEEEETTTTEEECCCCHHHHHHHHHHHHHHHHCTTS
T ss_pred c----------cCCCCEEEEEEEEEecCccCCceeeccHHHHHHHHHHHHHHHhcCCCC
Confidence 4 4569999999998643 346899999999999998643
No 73
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=99.97 E-value=1.5e-31 Score=268.91 Aligned_cols=281 Identities=17% Similarity=0.257 Sum_probs=193.5
Q ss_pred CcEEEECcChHHHHHHHHHHHc--CCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCC
Q 044575 13 KNVCVIGAGPSGLVAARELRKE--GHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKK 90 (454)
Q Consensus 13 ~~VvIIGaG~aGl~aA~~l~~~--g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (454)
+||+|||||+||+++|..|++. |.+|+|||+++.++... |. .+.|..-... .+.
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~----~~------~~~~~~g~~~---------~~~----- 56 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLS----CG------IALYLGKEIK---------NND----- 56 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCG----GG------HHHHHTTCBG---------GGC-----
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCccc----cc------chhhhcCCcc---------cCC-----
Confidence 4899999999999999999998 99999999987654211 00 0000000000 000
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEcc
Q 044575 91 GRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVAT 170 (454)
Q Consensus 91 ~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAt 170 (454)
.+++..++.+.++++++. ++++++|..++... .+|.+.+..++...++.||+|||||
T Consensus 57 ---------~~~~~~~~~~~~~~~gv~--~~~~~~v~~i~~~~------------~~v~v~~~~~g~~~~~~~d~lviAt 113 (452)
T 2cdu_A 57 ---------PRGLFYSSPEELSNLGAN--VQMRHQVTNVDPET------------KTIKVKDLITNEEKTEAYDKLIMTT 113 (452)
T ss_dssp ---------GGGGBSCCHHHHHHTTCE--EEESEEEEEEEGGG------------TEEEEEETTTCCEEEEECSEEEECC
T ss_pred ---------HHHhhhcCHHHHHHcCCE--EEeCCEEEEEEcCC------------CEEEEEecCCCceEEEECCEEEEcc
Confidence 001111123344566776 77899999987653 2344443211223478999999999
Q ss_pred CCCCCCCCCCCCCcCCccceeEEeecCCCCC-----CCCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCcCc-cc
Q 044575 171 GHYSYPRLPSIKGMDKWKRKQMHSHIYRVPE-----PFRNEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNISE-GL 244 (454)
Q Consensus 171 G~~~~p~~p~i~G~~~~~~~~~~~~~~~~~~-----~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~~~-~~ 244 (454)
| +.|..|++||.+.. .+++...+.+.. ...+++++|||+|.+|+|+|..+++.|.+|+++++.+.+.+ .+
T Consensus 114 G--s~p~~p~i~g~~~~--~v~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~ 189 (452)
T 2cdu_A 114 G--SKPTVPPIPGIDSS--RVYLCKNYNDAKKLFEEAPKAKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYKYF 189 (452)
T ss_dssp C--EEECCCCCTTTTST--TEEECSSHHHHHHHHHHGGGCSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTTTS
T ss_pred C--CCcCCCCCCCCCCC--CEEEeCcHHHHHHHHHHhccCCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhhhh
Confidence 9 89999999997531 234433221111 12468999999999999999999999999999999887654 22
Q ss_pred h--------hhhc-cCCCeEEcCceeEEec-CCcE--EEeCCCEEeeceEEEccCcccCCcCCCC------CCceeeCCC
Q 044575 245 S--------KVIS-KHNNLHLHPQIDCLRE-DGRV--TFVDGCWVTADTILYCTGYSYSFPFLDT------KGIVVVDDD 306 (454)
Q Consensus 245 ~--------~~l~-~~~~i~~~~~v~~v~~-~~~v--~~~dG~~i~~D~vI~atG~~~~~~~l~~------~g~i~v~~~ 306 (454)
. +.+. ..++++.++.|+++.. ++.+ +..+|+++++|.||+|+|++|++++++. +|.+.+|++
T Consensus 190 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~v~~v~~~g~~i~~D~vv~a~G~~p~~~ll~~~l~~~~~G~i~Vd~~ 269 (452)
T 2cdu_A 190 DKEFTDILAKDYEAHGVNLVLGSKVAAFEEVDDEIITKTLDGKEIKSDIAILCIGFRPNTELLKGKVAMLDNGAIITDEY 269 (452)
T ss_dssp CHHHHHHHHHHHHHTTCEEEESSCEEEEEEETTEEEEEETTSCEEEESEEEECCCEEECCGGGTTTSCBCTTSCBCCCTT
T ss_pred hhhHHHHHHHHHHHCCCEEEcCCeeEEEEcCCCeEEEEEeCCCEEECCEEEECcCCCCCHHHHHHhhhcCCCCCEEECCC
Confidence 2 2222 2357889999999975 4433 3448889999999999999999887652 344555554
Q ss_pred CcccccCcccCCCCCCCceEecccccc-----------cchhHHHHHHHHHHHHHcCCC
Q 044575 307 RVGPLYEHTFPPSLAPSLSFVGIPRKL-----------IGFPFFESQAKWIAQLLSGKR 354 (454)
Q Consensus 307 ~~~~~~~~~~~~~~~p~l~~iG~~~~~-----------~~~~~a~~qa~~~a~~i~g~~ 354 (454)
.+ ++.|++|++||+... ..++.|..||+.+|+++.|..
T Consensus 270 ~~----------t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~ 318 (452)
T 2cdu_A 270 MH----------SSNRDIFAAGDSAAVHYNPTNSNAYIPLATNAVRQGRLVGLNLTEDK 318 (452)
T ss_dssp SB----------CSSTTEEECSTTBCEEETTTTEEECCCCHHHHHHHHHHHHHTSSSCC
T ss_pred cC----------cCCCCEEEcceEEEeccccCCCeeecchHHHHHHHHHHHHHHhCCCC
Confidence 33 357999999999863 245799999999999999864
No 74
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=99.97 E-value=3.8e-31 Score=265.58 Aligned_cols=279 Identities=16% Similarity=0.159 Sum_probs=191.5
Q ss_pred CcEEEECcChHHHHHHHHHHHc--CCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCC
Q 044575 13 KNVCVIGAGPSGLVAARELRKE--GHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKK 90 (454)
Q Consensus 13 ~~VvIIGaG~aGl~aA~~l~~~--g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (454)
+||+|||||+||++||..|++. |.+|+|||+++.+|.. +|. .+.+. .. ..
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~----~~~------~~~~~------~~------~~------ 52 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFL----SAG------MQLYL------EG------KV------ 52 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBC----GGG------HHHHH------TT------SS------
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCcc----ccc------chhhh------cC------cc------
Confidence 3799999999999999999998 8999999998766421 110 00000 00 00
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEcc
Q 044575 91 GRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVAT 170 (454)
Q Consensus 91 ~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAt 170 (454)
...+++..++.+..+++++. ++++++|..++... .+|++.+..++...++.||+|||||
T Consensus 53 -------~~~~~~~~~~~~~~~~~gv~--~~~~~~v~~i~~~~------------~~v~~~~~~~g~~~~~~~d~lviAt 111 (447)
T 1nhp_A 53 -------KDVNSVRYMTGEKMESRGVN--VFSNTEITAIQPKE------------HQVTVKDLVSGEERVENYDKLIISP 111 (447)
T ss_dssp -------CCGGGSBSCCHHHHHHTTCE--EEETEEEEEEETTT------------TEEEEEETTTCCEEEEECSEEEECC
T ss_pred -------CCHHHhhcCCHHHHHHCCCE--EEECCEEEEEeCCC------------CEEEEEecCCCceEEEeCCEEEEcC
Confidence 00011111223344556776 77899999987653 2355544111223358999999999
Q ss_pred CCCCCCCCCCCCCcCCccceeEEeecCCCC-------CCCCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCcCc-
Q 044575 171 GHYSYPRLPSIKGMDKWKRKQMHSHIYRVP-------EPFRNEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNISE- 242 (454)
Q Consensus 171 G~~~~p~~p~i~G~~~~~~~~~~~~~~~~~-------~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~~~- 242 (454)
| +.|..|++||.+. . .+++...+.+. ....+++++|||+|++|+|+|..+++.|.+|+++++.+.+.+
T Consensus 112 G--~~p~~p~i~G~~~-~-~v~~~~~~~~~~~l~~~~~~~~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~ 187 (447)
T 1nhp_A 112 G--AVPFELDIPGKDL-D-NIYLMRGRQWAIKLKQKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGV 187 (447)
T ss_dssp C--EEECCCCSTTTTS-B-SEECCCHHHHHHHHHHHHTCTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT
T ss_pred C--CCcCCCCCCCCCC-C-CeEEECCHHHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccc
Confidence 9 8899999999863 2 24443332111 112578999999999999999999999999999999887644
Q ss_pred cch--------hhhccC-CCeEEcCceeEEecCCcE--EEeCCCEEeeceEEEccCcccCCcCCCC------CCceeeCC
Q 044575 243 GLS--------KVISKH-NNLHLHPQIDCLREDGRV--TFVDGCWVTADTILYCTGYSYSFPFLDT------KGIVVVDD 305 (454)
Q Consensus 243 ~~~--------~~l~~~-~~i~~~~~v~~v~~~~~v--~~~dG~~i~~D~vI~atG~~~~~~~l~~------~g~i~v~~ 305 (454)
.+. +.+.+. .+++.+..|+++..++.+ +..+|+++++|.||+|+|++|+.+++.. +|.+.+|+
T Consensus 188 ~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~v~~v~~~~~~i~~d~vi~a~G~~p~~~~~~~~~~~~~~G~i~Vd~ 267 (447)
T 1nhp_A 188 YLDKEFTDVLTEEMEANNITIATGETVERYEGDGRVQKVVTDKNAYDADLVVVAVGVRPNTAWLKGTLELHPNGLIKTDE 267 (447)
T ss_dssp TCCHHHHHHHHHHHHTTTEEEEESCCEEEEECSSBCCEEEESSCEEECSEEEECSCEEESCGGGTTTSCBCTTSCBCCCT
T ss_pred cCCHHHHHHHHHHHHhCCCEEEcCCEEEEEEccCcEEEEEECCCEEECCEEEECcCCCCChHHHHhhhhhcCCCcEEECc
Confidence 122 223233 477888899999765422 3347788999999999999999887643 34455554
Q ss_pred CCcccccCcccCCCCCCCceEecccccc-----------cchhHHHHHHHHHHHHHcCCC
Q 044575 306 DRVGPLYEHTFPPSLAPSLSFVGIPRKL-----------IGFPFFESQAKWIAQLLSGKR 354 (454)
Q Consensus 306 ~~~~~~~~~~~~~~~~p~l~~iG~~~~~-----------~~~~~a~~qa~~~a~~i~g~~ 354 (454)
+.. ++.|++|++||+... ...+.|..||+.+|.++.|..
T Consensus 268 ~~~----------t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~ 317 (447)
T 1nhp_A 268 YMR----------TSEPDVFAVGDATLIKYNPADTEVNIALATNARKQGRFAVKNLEEPV 317 (447)
T ss_dssp TCB----------CSSTTEEECGGGSCEEEGGGTEEECCCCHHHHHHHHHHHHHTSSSCC
T ss_pred ccc----------CCCCCEEEeeeEEEeeccCCCCceechhHHHHHHHHHHHHHhhcCCC
Confidence 433 356999999999853 235789999999999999863
No 75
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=99.97 E-value=2.6e-31 Score=261.54 Aligned_cols=273 Identities=19% Similarity=0.235 Sum_probs=194.5
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcC--CcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEG--HRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVL 88 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g--~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (454)
..+||+|||||+||++||..|++.| .+|+++|+++ |..|... .+... +
T Consensus 3 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~--g~~~~~~-----------~l~~~-------------~---- 52 (384)
T 2v3a_A 3 ERAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD--GRSYSKP-----------MLSTG-------------F---- 52 (384)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC--CCEECGG-----------GGGGT-------------T----
T ss_pred CCCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC--CCccCcc-----------cccHH-------------H----
Confidence 3589999999999999999999998 5799999875 3332210 00000 0
Q ss_pred CCCCCCCCCCCHHHHH-HHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEE
Q 044575 89 KKGRDVRRFPGHKELW-LYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVV 167 (454)
Q Consensus 89 ~~~~~~~~~~~~~~~~-~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vV 167 (454)
.......++. .++..+++++++. +.++++|..++.. .++|++.+ . ++.||+||
T Consensus 53 ------~~~~~~~~~~~~~~~~~~~~~~v~--~~~~~~v~~i~~~------------~~~v~~~~-~-----~~~~d~lv 106 (384)
T 2v3a_A 53 ------SKNKDADGLAMAEPGAMAEQLNAR--ILTHTRVTGIDPG------------HQRIWIGE-E-----EVRYRDLV 106 (384)
T ss_dssp ------TTTCCHHHHEEECHHHHHHHTTCE--EECSCCCCEEEGG------------GTEEEETT-E-----EEECSEEE
T ss_pred ------hCCCCHHHhhccCHHHHHHhCCcE--EEeCCEEEEEECC------------CCEEEECC-c-----EEECCEEE
Confidence 0011224443 3566777778877 7778889888754 45666642 1 68999999
Q ss_pred EccCCCCCCCCCCCCCcCCccceeEEeecCCCC-----CCCCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCcCc
Q 044575 168 VATGHYSYPRLPSIKGMDKWKRKQMHSHIYRVP-----EPFRNEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNISE 242 (454)
Q Consensus 168 iAtG~~~~p~~p~i~G~~~~~~~~~~~~~~~~~-----~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~~~ 242 (454)
+||| +.|..|++||.+. ..++++..+.+. ....+++++|||+|.+|+|+|..+++.+.+|+++++.+.+.+
T Consensus 107 iAtG--~~p~~p~i~g~~~--~~v~~~~~~~~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~ 182 (384)
T 2v3a_A 107 LAWG--AEPIRVPVEGDAQ--DALYPINDLEDYARFRQAAAGKRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMP 182 (384)
T ss_dssp ECCC--EEECCCCCBSTTT--TCEEECSSHHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST
T ss_pred EeCC--CCcCCCCCCCcCc--CCEEEECCHHHHHHHHHhhccCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhh
Confidence 9999 8999999998753 123343332111 012369999999999999999999999999999999887643
Q ss_pred cc---------hhhhcc-CCCeEEcCceeEEecCC---cEEEeCCCEEeeceEEEccCcccCCcCCC------CCCceee
Q 044575 243 GL---------SKVISK-HNNLHLHPQIDCLREDG---RVTFVDGCWVTADTILYCTGYSYSFPFLD------TKGIVVV 303 (454)
Q Consensus 243 ~~---------~~~l~~-~~~i~~~~~v~~v~~~~---~v~~~dG~~i~~D~vI~atG~~~~~~~l~------~~g~i~v 303 (454)
.+ .+.+.+ ..+++.+..|+++..++ .|++.+|+++++|.||+|+|++|+.+++. ++| +.+
T Consensus 183 ~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vv~a~G~~p~~~l~~~~g~~~~~g-i~v 261 (384)
T 2v3a_A 183 GLLHPAAAKAVQAGLEGLGVRFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLVVSAVGLRPRTELAFAAGLAVNRG-IVV 261 (384)
T ss_dssp TTSCHHHHHHHHHHHHTTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEECCHHHHHTTCCBSSS-EEE
T ss_pred cccCHHHHHHHHHHHHHcCCEEEeCCEEEEEEecCCEEEEEECCCCEEECCEEEECcCCCcCHHHHHHCCCCCCCC-EEE
Confidence 32 122322 35788888999986432 47788999999999999999999987643 234 666
Q ss_pred CCCCcccccCcccCCCCCCCceEecccccc-----cchhHHHHHHHHHHHHHcCCC
Q 044575 304 DDDRVGPLYEHTFPPSLAPSLSFVGIPRKL-----IGFPFFESQAKWIAQLLSGKR 354 (454)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~p~l~~iG~~~~~-----~~~~~a~~qa~~~a~~i~g~~ 354 (454)
|+..+ ++.|++|++||+... ..+..|..||+.+|++|.|+.
T Consensus 262 d~~~~----------t~~~~IyA~GD~~~~~~~~~~~~~~a~~~g~~~a~~i~g~~ 307 (384)
T 2v3a_A 262 DRSLR----------TSHANIYALGDCAEVDGLNLLYVMPLMACARALAQTLAGNP 307 (384)
T ss_dssp CTTCB----------CSSTTEEECGGGEEETTBCCCSHHHHHHHHHHHHHHHTTCC
T ss_pred CCCCC----------CCCCCEEEeeeeeeECCCCcchHHHHHHHHHHHHHHhcCCC
Confidence 66544 457999999999742 124568899999999999864
No 76
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=99.97 E-value=4.4e-31 Score=263.56 Aligned_cols=276 Identities=18% Similarity=0.217 Sum_probs=191.6
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCC--cEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGH--RVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLK 89 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~--~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (454)
.+||+|||||++|+++|..|++.|. +|+|||+++.++.. .+ ..++.+.... ...
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~----~~----------------~l~~~~~~~~-~~~--- 59 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHH----LP----------------PLSKAYLAGK-ATA--- 59 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBC----SG----------------GGGTTTTTTC-SCS---
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCc----CC----------------CCcHHHhCCC-CCh---
Confidence 4799999999999999999999998 79999997653211 00 0000000000 000
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEc
Q 044575 90 KGRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVA 169 (454)
Q Consensus 90 ~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViA 169 (454)
+++.....++.++.++. ++++++|..++.. .++|++.++. ++.||+||+|
T Consensus 60 -----------~~~~~~~~~~~~~~gv~--~~~~~~v~~i~~~------------~~~v~~~~g~-----~~~~d~lviA 109 (431)
T 1q1r_A 60 -----------ESLYLRTPDAYAAQNIQ--LLGGTQVTAINRD------------RQQVILSDGR-----ALDYDRLVLA 109 (431)
T ss_dssp -----------GGGBSSCHHHHHHTTEE--EECSCCEEEEETT------------TTEEEETTSC-----EEECSEEEEC
T ss_pred -----------HHhcccCHHHHHhCCCE--EEeCCEEEEEECC------------CCEEEECCCC-----EEECCEEEEc
Confidence 00000112334556766 7888999999864 3457776544 7899999999
Q ss_pred cCCCCCCCCCCCCCcCCccc-e-eEEeecCCC-----CCCCCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCcCc
Q 044575 170 TGHYSYPRLPSIKGMDKWKR-K-QMHSHIYRV-----PEPFRNEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNISE 242 (454)
Q Consensus 170 tG~~~~p~~p~i~G~~~~~~-~-~~~~~~~~~-----~~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~~~ 242 (454)
|| +.|+.|++||.+. .+ . +.+.....+ .....+++|+|||+|.+|+|+|..+++.|.+|+++++.+.+.+
T Consensus 110 tG--~~p~~~~i~G~~~-~~~~~v~~~~~~~d~~~l~~~l~~~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~ 186 (431)
T 1q1r_A 110 TG--GRPRPLPVASGAV-GKANNFRYLRTLEDAECIRRQLIADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLE 186 (431)
T ss_dssp CC--EEECCCGGGTTHH-HHSTTEEESSSHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTT
T ss_pred CC--CCccCCCCCCccc-CCCceEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccc
Confidence 99 8999999998752 22 0 221111100 0112479999999999999999999999999999999887643
Q ss_pred c-c----h----hhhc-cCCCeEEcCceeEEec--C-C---cEEEeCCCEEeeceEEEccCcccCCcCCCCC-----Cce
Q 044575 243 G-L----S----KVIS-KHNNLHLHPQIDCLRE--D-G---RVTFVDGCWVTADTILYCTGYSYSFPFLDTK-----GIV 301 (454)
Q Consensus 243 ~-~----~----~~l~-~~~~i~~~~~v~~v~~--~-~---~v~~~dG~~i~~D~vI~atG~~~~~~~l~~~-----g~i 301 (454)
. + . +.+. ..++++.+..|+++.. + + .|.+.||+++++|.||+|+|++|+.+++... +.+
T Consensus 187 ~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~~p~~~l~~~~gl~~~~gi 266 (431)
T 1q1r_A 187 RVTAPPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGLIPNCELASAAGLQVDNGI 266 (431)
T ss_dssp TTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCEEECCHHHHHTTCCBSSSE
T ss_pred chhhHHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCCCcCcchhhccCCCCCCCE
Confidence 2 2 1 2222 2357888889999875 2 3 4678899999999999999999998775421 236
Q ss_pred eeCCCCcccccCcccCCCCCCCceEeccccccc-----------chhHHHHHHHHHHHHHcCCC
Q 044575 302 VVDDDRVGPLYEHTFPPSLAPSLSFVGIPRKLI-----------GFPFFESQAKWIAQLLSGKR 354 (454)
Q Consensus 302 ~v~~~~~~~~~~~~~~~~~~p~l~~iG~~~~~~-----------~~~~a~~qa~~~a~~i~g~~ 354 (454)
.+|+..+ ++.|++|++||+...+ .++.|..||+.+|++|.|+.
T Consensus 267 ~Vd~~~~----------ts~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~ 320 (431)
T 1q1r_A 267 VINEHMQ----------TSDPLIMAVGDCARFHSQLYDRWVRIESVPNALEQARKIAAILCGKV 320 (431)
T ss_dssp ECCTTSB----------CSSTTEEECGGGEEEEETTTTEEEECCSHHHHHHHHHHHHHHHTTCC
T ss_pred EECCCcc----------cCCCCEEEEEeEEEEccccCCceEeeCHHHHHHHHHHHHHHHhcCCC
Confidence 6666544 4569999999998643 24679999999999999874
No 77
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=99.97 E-value=7e-31 Score=265.81 Aligned_cols=280 Identities=20% Similarity=0.230 Sum_probs=190.7
Q ss_pred CCcEEEECcChHHHHHHHHHHHc--CCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKE--GHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLK 89 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~--g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (454)
.+||+|||||+||+++|..|++. |.+|+|||+++..++.... .+.+ . .+.
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~----------~~~~------~-------~~~----- 87 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQCG----------LPYV------I-------SGA----- 87 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGGG----------HHHH------H-------TTS-----
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCCC----------cchh------h-------cCC-----
Confidence 36999999999999999999997 8999999998765422110 0000 0 000
Q ss_pred CCCCCCCCCCHHHHH-HHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEE
Q 044575 90 KGRDVRRFPGHKELW-LYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVV 168 (454)
Q Consensus 90 ~~~~~~~~~~~~~~~-~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVi 168 (454)
+...+++. .+...+.+++++. ++++++|..|+... .+|++.+..++...++.||+|||
T Consensus 88 -------~~~~~~l~~~~~~~~~~~~gv~--~~~~~~v~~i~~~~------------~~v~v~~~~~g~~~~~~~d~lvi 146 (480)
T 3cgb_A 88 -------IASTEKLIARNVKTFRDKYGID--AKVRHEVTKVDTEK------------KIVYAEHTKTKDVFEFSYDRLLI 146 (480)
T ss_dssp -------SSCGGGGBSSCHHHHHHTTCCE--EESSEEEEEEETTT------------TEEEEEETTTCCEEEEECSEEEE
T ss_pred -------cCCHHHhhhcCHHHHHhhcCCE--EEeCCEEEEEECCC------------CEEEEEEcCCCceEEEEcCEEEE
Confidence 00001111 1123344556776 78889999998653 23444431112234689999999
Q ss_pred ccCCCCCCCCCCCCCcCCccceeEEeecCCCC-------CCCCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCcC
Q 044575 169 ATGHYSYPRLPSIKGMDKWKRKQMHSHIYRVP-------EPFRNEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNIS 241 (454)
Q Consensus 169 AtG~~~~p~~p~i~G~~~~~~~~~~~~~~~~~-------~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~~ 241 (454)
||| +.|+.|++||.+.. .+++...+.+. ....+++|+|||+|++|+|+|..+++.+.+|+++++.+.+.
T Consensus 147 AtG--~~p~~p~i~G~~~~--~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l 222 (480)
T 3cgb_A 147 ATG--VRPVMPEWEGRDLQ--GVHLLKTIPDAERILKTLETNKVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIG 222 (480)
T ss_dssp CCC--EEECCCCCBTTTSB--TEECCSSHHHHHHHHHHHHSSCCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTT
T ss_pred CCC--CcccCCCCCCccCC--CEEEeCCHHHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchh
Confidence 999 89999999997541 13332221111 01257999999999999999999999999999999988765
Q ss_pred ccchh--------hhcc-CCCeEEcCceeEEecCCcE--EEeCCCEEeeceEEEccCcccCCcCCCC-------CCceee
Q 044575 242 EGLSK--------VISK-HNNLHLHPQIDCLREDGRV--TFVDGCWVTADTILYCTGYSYSFPFLDT-------KGIVVV 303 (454)
Q Consensus 242 ~~~~~--------~l~~-~~~i~~~~~v~~v~~~~~v--~~~dG~~i~~D~vI~atG~~~~~~~l~~-------~g~i~v 303 (454)
+.+.. .+.+ .++++.++.|+++..++.+ +..++.++++|.||+|+|++|+.+++.. +|.+.+
T Consensus 223 ~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~v~~v~~~~~~i~~D~vi~a~G~~p~~~~l~~~g~~~~~~G~I~V 302 (480)
T 3cgb_A 223 TIYDGDMAEYIYKEADKHHIEILTNENVKAFKGNERVEAVETDKGTYKADLVLVSVGVKPNTDFLEGTNIRTNHKGAIEV 302 (480)
T ss_dssp SSSCHHHHHHHHHHHHHTTCEEECSCCEEEEEESSBEEEEEETTEEEECSEEEECSCEEESCGGGTTSCCCBCTTSCBCC
T ss_pred hcCCHHHHHHHHHHHHHcCcEEEcCCEEEEEEcCCcEEEEEECCCEEEcCEEEECcCCCcChHHHHhCCcccCCCCCEEE
Confidence 43322 2222 3477888899999765533 3445668999999999999999887653 244555
Q ss_pred CCCCcccccCcccCCCCCCCceEecccccc-----------cchhHHHHHHHHHHHHHcCCC
Q 044575 304 DDDRVGPLYEHTFPPSLAPSLSFVGIPRKL-----------IGFPFFESQAKWIAQLLSGKR 354 (454)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~p~l~~iG~~~~~-----------~~~~~a~~qa~~~a~~i~g~~ 354 (454)
|++.+ ++.|++|++||+... ...+.|..||+++|+++.|..
T Consensus 303 d~~~~----------ts~p~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~ 354 (480)
T 3cgb_A 303 NAYMQ----------TNVQDVYAAGDCATHYHVIKEIHDHIPIGTTANKQGRLAGLNMLDKR 354 (480)
T ss_dssp CTTSB----------CSSTTEEECGGGBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHTTCC
T ss_pred CCCcc----------CCCCCEEEeeeEEEecCCCCCcceecchHHHHHHHHHHHHHHhcCCC
Confidence 54433 346999999999843 235789999999999999853
No 78
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=99.97 E-value=1e-30 Score=271.87 Aligned_cols=298 Identities=17% Similarity=0.242 Sum_probs=193.1
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeC-C-------CCCcccccCCCCCCCCccc-cccccceecCCcccccc
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQN-H-------DVGGQWLYDPNTDQTEVHS-SVYASLRLTSPREIMGY 81 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~-~-------~~GG~w~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 81 (454)
..+||+||||||||++||..|++.|++|+|||+. + .+||+|.+.+|.|++.+.. ........+.. .|
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~~~~~----~~ 181 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDAE----HF 181 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHH----HT
T ss_pred ccccEEEECCCccHHHHHHHHHhCCCeEEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHHhhHH----hC
Confidence 4589999999999999999999999999999973 2 4899998877765431110 00000000000 00
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-----------CCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEE
Q 044575 82 TDFPFVLKKGRDVRRFPGHKELWLYLKDFCQRF-----------GLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKS 150 (454)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~-----------~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~ 150 (454)
++.++. ........++.+|++++++++ ++. .....+..++ .|.+.+
T Consensus 182 -g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~---~~~~~~~~~~--------------~~~v~v 238 (598)
T 2x8g_A 182 -GWSLDR-----SKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVT---YLNAKGRLIS--------------PHEVQI 238 (598)
T ss_dssp -TCCCCG-----GGCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCE---EECSEEEEEE--------------TTEEEE
T ss_pred -CccccC-----CcCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcE---EEEEEEEEcC--------------CCEEEE
Confidence 011110 001235577777777666543 222 1122333332 344554
Q ss_pred eecCCCeEEEEEeCEEEEccCCCCCCCCCCCCCcCCccceeEEeecCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhhcCe
Q 044575 151 KEKKADKVVEEVFDAVVVATGHYSYPRLPSIKGMDKWKRKQMHSHIYRVPEPFRNEVVVVVGNSLSGQDISMELVEVAKE 230 (454)
Q Consensus 151 ~~~~~~~~~~~~~d~vViAtG~~~~p~~p~i~G~~~~~~~~~~~~~~~~~~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~ 230 (454)
...+ +...++.||+|||||| +.|+.|++||.+.+ .+++...... ...+++|+|||+|.+|+|+|..|++.|.+
T Consensus 239 ~~~~-g~~~~~~~d~lviAtG--s~p~~p~i~G~~~~---~~~~~~~~~~-~~~~~~vvViGgG~~g~E~A~~l~~~g~~ 311 (598)
T 2x8g_A 239 TDKN-QKVSTITGNKIILATG--ERPKYPEIPGAVEY---GITSDDLFSL-PYFPGKTLVIGASYVALECAGFLASLGGD 311 (598)
T ss_dssp ECTT-CCEEEEEEEEEEECCC--EEECCCSSTTHHHH---CEEHHHHTTC-SSCCCSEEEECCSHHHHHHHHHHHHTTCC
T ss_pred EeCC-CCeEEEEeCEEEEeCC--CCCCCCCCCCcccc---eEcHHHHhhC-ccCCCEEEEECCCHHHHHHHHHHHHcCCE
Confidence 4322 2234689999999999 89999999997543 2344333222 23467899999999999999999999999
Q ss_pred EEEecccCCcCccch----h----hhcc-CCCeEEcCceeEEec-------C---CcE--E--EeCCCEEe--eceEEEc
Q 044575 231 VHLSAKSLNISEGLS----K----VISK-HNNLHLHPQIDCLRE-------D---GRV--T--FVDGCWVT--ADTILYC 285 (454)
Q Consensus 231 V~l~~r~~~~~~~~~----~----~l~~-~~~i~~~~~v~~v~~-------~---~~v--~--~~dG~~i~--~D~vI~a 285 (454)
|++++|. .+.+.+. + .+.+ .++++.+..++++.. + +.+ . +.+|++++ +|.||+|
T Consensus 312 Vtlv~~~-~~l~~~d~~~~~~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a 390 (598)
T 2x8g_A 312 VTVMVRS-ILLRGFDQQMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFA 390 (598)
T ss_dssp EEEEESS-CSSTTSCHHHHHHHHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEEC
T ss_pred EEEEECC-cCcCcCCHHHHHHHHHHHHhCCCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEE
Confidence 9999987 4433322 2 2222 346777766666631 1 323 2 35787765 9999999
Q ss_pred cCcccCCcCCC---------CCCceeeCCCCcccccCcccCCCCCCCceEecccccc--cchhHHHHHHHHHHHHHcCC
Q 044575 286 TGYSYSFPFLD---------TKGIVVVDDDRVGPLYEHTFPPSLAPSLSFVGIPRKL--IGFPFFESQAKWIAQLLSGK 353 (454)
Q Consensus 286 tG~~~~~~~l~---------~~g~i~v~~~~~~~~~~~~~~~~~~p~l~~iG~~~~~--~~~~~a~~qa~~~a~~i~g~ 353 (454)
+|++|++++|. ++|.+.+|+... ++.|++|++||+... ...+.|..||+.+|.+|.|.
T Consensus 391 ~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~----------ts~~~VyA~GD~~~~~~~~~~~A~~~g~~aa~~i~~~ 459 (598)
T 2x8g_A 391 VGREPQLSKVLCETVGVKLDKNGRVVCTDDEQ----------TTVSNVYAIGDINAGKPQLTPVAIQAGRYLARRLFAG 459 (598)
T ss_dssp SCEEECGGGTBCGGGCCCBCTTSCBCCCTTSB----------CSSTTEEECGGGBTTSCCCHHHHHHHHHHHHHHHHHC
T ss_pred eCCccccCccCchhcCceECCCCcEEeCCCCc----------CCCCCEEEEeeecCCCCccHHHHHHhHHHHHHHHhcC
Confidence 99999988742 234555555433 457999999999533 34579999999999999865
No 79
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=99.96 E-value=5.2e-30 Score=256.47 Aligned_cols=265 Identities=21% Similarity=0.160 Sum_probs=182.3
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKK 90 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (454)
..++|+||||||||+++|..|++.|++|+|||+.+.+||.|.+.
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~~g------------------------------------ 164 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLVYG------------------------------------ 164 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHHHT------------------------------------
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeeeec------------------------------------
Confidence 46899999999999999999999999999999999999998752
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEcc
Q 044575 91 GRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVAT 170 (454)
Q Consensus 91 ~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAt 170 (454)
.+.|...+++..+..++++++++. +++++.|. ..+++.+. .+.||+|||||
T Consensus 165 ---ip~~~~~~~~~~~~~~~l~~~gv~--~~~~~~v~------------------~~v~~~~~------~~~~d~vvlAt 215 (456)
T 2vdc_G 165 ---IPGFKLEKSVVERRVKLLADAGVI--YHPNFEVG------------------RDASLPEL------RRKHVAVLVAT 215 (456)
T ss_dssp ---SCTTTSCHHHHHHHHHHHHHTTCE--EETTCCBT------------------TTBCHHHH------HSSCSEEEECC
T ss_pred ---CCCccCCHHHHHHHHHHHHHCCcE--EEeCCEec------------------cEEEhhHh------HhhCCEEEEec
Confidence 011111256777778888888876 77776542 01222221 24599999999
Q ss_pred CCCCCCCCCCCCCcCCccceeEEeec---------CCC--------CCCCCCCeEEEEcCCCCHHHHHHHHhhhcC-eEE
Q 044575 171 GHYSYPRLPSIKGMDKWKRKQMHSHI---------YRV--------PEPFRNEVVVVVGNSLSGQDISMELVEVAK-EVH 232 (454)
Q Consensus 171 G~~~~p~~p~i~G~~~~~~~~~~~~~---------~~~--------~~~~~~k~vvVVG~G~sg~e~A~~l~~~~~-~V~ 232 (454)
|. ..|+.|.+||.+. .+ +.+... +.. .....+|+|+|||+|.+|+|+|..+.+.|. +|+
T Consensus 216 G~-~~~~~~~ipG~~~-~g-v~~a~~~l~~~~~~~~~~~~~~~~~g~~~~~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vt 292 (456)
T 2vdc_G 216 GV-YKARDIKAPGSGL-GN-IVAALDYLTTSNKVSLGDTVEAYENGSLNAAGKHVVVLGGGDTAMDCVRTAIRQGATSVK 292 (456)
T ss_dssp CC-CEECCTTCSCCTT-TT-EEEHHHHHHHHHHHHCTTTCSSCCTTCSCCCCSEEEEECSSHHHHHHHHHHHHTTCSEEE
T ss_pred CC-CCCCCCCCCCCcC-CC-cEEHHHHHHHhhhhhcccccccccccccccCCCEEEEECCChhHHHHHHHHHHcCCCEEE
Confidence 94 2377788888753 22 222111 111 123578999999999999999999999986 699
Q ss_pred EecccCCc-Cccchh----hhccCCCeEEcCceeEEecCCc---EEEe------------------CC--CEEeeceEEE
Q 044575 233 LSAKSLNI-SEGLSK----VISKHNNLHLHPQIDCLREDGR---VTFV------------------DG--CWVTADTILY 284 (454)
Q Consensus 233 l~~r~~~~-~~~~~~----~l~~~~~i~~~~~v~~v~~~~~---v~~~------------------dG--~~i~~D~vI~ 284 (454)
++.|++.. .+...+ ...+.++++....+.++..++. |++. +| .++++|.||+
T Consensus 293 iv~r~~~~~~p~~~~e~~~~~~~Gv~~~~~~~~~~i~~~g~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~ 372 (456)
T 2vdc_G 293 CLYRRDRKNMPGSQREVAHAEEEGVEFIWQAAPEGFTGDTVVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIK 372 (456)
T ss_dssp EECSSCSTTCSSCHHHHHHHHHTTCEEECCSSSCCEEEEEEEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEE
T ss_pred EEEeCCccCCCCCHHHHHHHHHCCCEEEeCCCceEEeCCCcEEEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEE
Confidence 99998765 332222 2233346666666666643321 2221 33 3688999999
Q ss_pred ccCcccCCc--CCC-------CCCceeeCCCCcccccCcccCCCCCCCceEeccccccc-chhHHHHHHHHHHHHHcC
Q 044575 285 CTGYSYSFP--FLD-------TKGIVVVDDDRVGPLYEHTFPPSLAPSLSFVGIPRKLI-GFPFFESQAKWIAQLLSG 352 (454)
Q Consensus 285 atG~~~~~~--~l~-------~~g~i~v~~~~~~~~~~~~~~~~~~p~l~~iG~~~~~~-~~~~a~~qa~~~a~~i~g 352 (454)
|+|+.|+.. ++. ++|.+.+|+. .+. ++.|++|++||+..++ ....|..||+.+|.+|.+
T Consensus 373 A~G~~p~~~~~~l~~~gl~~~~~G~i~vd~~--------~~~-Ts~~~VfA~GD~~~g~~~v~~A~~~G~~aA~~i~~ 441 (456)
T 2vdc_G 373 ALGFEPEDLPNAFDEPELKVTRWGTLLVDHR--------TKM-TNMDGVFAAGDIVRGASLVVWAIRDGRDAAEGIHA 441 (456)
T ss_dssp CSCEECCCHHHHHHSTTSCBCTTSSBCCCTT--------TCB-CSSTTEEECGGGGSSCCSHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCcchhhcccCCeeECCCCCEEECCC--------CCc-CCCCCEEEeccccCCchHHHHHHHHHHHHHHHHHH
Confidence 999999864 443 3345555543 122 4579999999998654 457899999999987753
No 80
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.96 E-value=2.5e-29 Score=251.81 Aligned_cols=263 Identities=20% Similarity=0.190 Sum_probs=180.8
Q ss_pred CCcEEEECcChHHHHHHHHHHH-c------CCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRK-E------GHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDF 84 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~-~------g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (454)
.++|+||||||||+++|..|++ . |.+|+|||+.+.+||.|.+. +
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~~g-v---------------------------- 53 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSG-V---------------------------- 53 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHHHT-S----------------------------
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccccc-c----------------------------
Confidence 4789999999999999999999 7 99999999999999998752 1
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeC
Q 044575 85 PFVLKKGRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFD 164 (454)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d 164 (454)
.+.++...++..++.++++++++. +..+.. + .. . |++.++ ++.||
T Consensus 54 ---------~p~~~~~~~~~~~~~~~~~~~~v~--~~~~v~---v---~~----------~--v~~~~~------~~~~d 98 (456)
T 1lqt_A 54 ---------APDHPKIKSISKQFEKTAEDPRFR--FFGNVV---V---GE----------H--VQPGEL------SERYD 98 (456)
T ss_dssp ---------CTTCTGGGGGHHHHHHHHTSTTEE--EEESCC---B---TT----------T--BCHHHH------HHHSS
T ss_pred ---------CCCCCCHHHHHHHHHHHHhcCCCE--EEeeEE---E---CC----------E--EEECCC------eEeCC
Confidence 011223356677777777666654 444432 1 11 1 333222 36799
Q ss_pred EEEEccCCCCC-CCCCCCCCcCCccceeEEeecC-----------CCCCCCCCCeEEEEcCCCCHHHHHHHHhhh-----
Q 044575 165 AVVVATGHYSY-PRLPSIKGMDKWKRKQMHSHIY-----------RVPEPFRNEVVVVVGNSLSGQDISMELVEV----- 227 (454)
Q Consensus 165 ~vViAtG~~~~-p~~p~i~G~~~~~~~~~~~~~~-----------~~~~~~~~k~vvVVG~G~sg~e~A~~l~~~----- 227 (454)
+|||||| +. |+.|++||.+ +.+ ++++..+ +....+.+++|+|||+|++|+|+|..|++.
T Consensus 99 ~lViAtG--~~~~~~~~ipG~~-~~g-v~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIG~G~~g~e~A~~L~~~~~~l~ 174 (456)
T 1lqt_A 99 AVIYAVG--AQSDRMLNIPGED-LPG-SIAAVDFVGWYNAHPHFEQVSPDLSGARAVVIGNGNVALDVARILLTDPDVLA 174 (456)
T ss_dssp EEEECCC--CCEECCCCCTTTT-STT-EEEHHHHHHHHTTCGGGTTCCCCCCSSEEEEECCSHHHHHHHHHHHSCHHHHT
T ss_pred EEEEeeC--CCCCCCCCCCCCC-CCC-cEEHHHHHhhhhcCcccccchhhcCCCEEEEECCCHHHHHHHHHHHhhhhhhc
Confidence 9999999 65 6778899986 333 4444332 233345789999999999999999999974
Q ss_pred ---------------c-CeEEEecccCCcCc-----------------------cc------------------hhhh--
Q 044575 228 ---------------A-KEVHLSAKSLNISE-----------------------GL------------------SKVI-- 248 (454)
Q Consensus 228 ---------------~-~~V~l~~r~~~~~~-----------------------~~------------------~~~l-- 248 (454)
+ ++|+++.|++.+.. .+ .+.+
T Consensus 175 ~tdi~~~~~~~l~~~g~~~V~lv~r~~~~~~~f~~~elrel~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 254 (456)
T 1lqt_A 175 RTDIADHALESLRPRGIQEVVIVGRRGPLQAAFTTLELRELADLDGVDVVIDPAELDGITDEDAAAVGKVCKQNIKVLRG 254 (456)
T ss_dssp TSCCCHHHHHHHTTCCCCEEEEECSSCGGGCCCCHHHHHHGGGCTTEEEECCGGGGTTCCHHHHHHHCHHHHHHHHHHHH
T ss_pred CCCccHHHHHHHHHCCCcEEEEEecCChhhhccChHHHHHhhcCCCceeeeChHHhccchhhhhhhccHHHHHHHHHHHH
Confidence 3 59999999876521 11 0111
Q ss_pred --cc-------CCCeEEcCceeEEecCC---cEEEe----------------CC--CEEeeceEEEccCcccCCcC----
Q 044575 249 --SK-------HNNLHLHPQIDCLREDG---RVTFV----------------DG--CWVTADTILYCTGYSYSFPF---- 294 (454)
Q Consensus 249 --~~-------~~~i~~~~~v~~v~~~~---~v~~~----------------dG--~~i~~D~vI~atG~~~~~~~---- 294 (454)
.+ ...++....+.++..++ .|.+. +| ++++||.||+|+|++|+. +
T Consensus 255 ~~~~~~~~~~~gv~i~~~~~~~~i~~~~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~p~~-l~gl~ 333 (456)
T 1lqt_A 255 YADREPRPGHRRMVFRFLTSPIEIKGKRKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYRGVP-TPGLP 333 (456)
T ss_dssp HHTCC-CTTSEEEEEECSEEEEEEECSSSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCEECCC-CTTSC
T ss_pred HhhcCCCCCCceEEEEeCCCCeEEecCCcEeEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEccccccCC-CCCCc
Confidence 12 23566677788887553 26664 45 358899999999999985 2
Q ss_pred CCCCCceeeCCCCcccccCcccCCCCCCCceEecccccccc--hhHHHHHHHHHHHHHcC
Q 044575 295 LDTKGIVVVDDDRVGPLYEHTFPPSLAPSLSFVGIPRKLIG--FPFFESQAKWIAQLLSG 352 (454)
Q Consensus 295 l~~~g~i~v~~~~~~~~~~~~~~~~~~p~l~~iG~~~~~~~--~~~a~~qa~~~a~~i~g 352 (454)
+++++.+.+|+..+. ++.|++|++|++..++. +..+..||+.+|.+|.+
T Consensus 334 ~d~~g~i~vn~~~rv---------t~~pgvya~GD~~~gp~~~i~~a~~~g~~~a~~i~~ 384 (456)
T 1lqt_A 334 FDDQSGTIPNVGGRI---------NGSPNEYVVGWIKRGPTGVIGTNKKDAQDTVDTLIK 384 (456)
T ss_dssp CBTTTTBCCEETTEE---------TTCSSEEECTHHHHCSCSCTTHHHHHHHHHHHHHHH
T ss_pred ccCCCCeeECCCCcC---------CCCCCEEEEeccCCCCchhHHHHHHHHHHHHHHHHH
Confidence 234455555554331 23699999999985443 35788999999887754
No 81
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=99.96 E-value=8.1e-29 Score=251.16 Aligned_cols=300 Identities=14% Similarity=0.161 Sum_probs=187.0
Q ss_pred ccCCCcEEEECcChHHHHHHHHHHHc--CCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCC
Q 044575 9 CAQSKNVCVIGAGPSGLVAARELRKE--GHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPF 86 (454)
Q Consensus 9 ~~~~~~VvIIGaG~aGl~aA~~l~~~--g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (454)
|+..+||+|||||+||++||..|++. +.+|+|||+++.++. ..+..++. ++.....+. ...+.|.+++.
T Consensus 8 ~~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y----~r~~lsk~----l~~~~~~~~-~~~~~~~~~~~ 78 (493)
T 1m6i_A 8 APSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPY----MRPPLSKE----LWFSDDPNV-TKTLRFKQWNG 78 (493)
T ss_dssp CCSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCB----CSGGGGTG----GGCC--CTH-HHHCEEECTTS
T ss_pred CCCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCC----CCCCCCHH----hhcCCccch-hhccccccccc
Confidence 45568999999999999999999887 789999999887642 11111110 000000000 00001111110
Q ss_pred CCCC--CCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeC
Q 044575 87 VLKK--GRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFD 164 (454)
Q Consensus 87 ~~~~--~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d 164 (454)
.... ......|...+++.+ ..+.++. ++++++|.+|+.. .++|++.++. ++.||
T Consensus 79 ~~~~~~~~~~~~~~~~~~l~~-----~~~~gv~--~~~g~~v~~id~~------------~~~V~~~~g~-----~i~yd 134 (493)
T 1m6i_A 79 KERSIYFQPPSFYVSAQDLPH-----IENGGVA--VLTGKKVVQLDVR------------DNMVKLNDGS-----QITYE 134 (493)
T ss_dssp CEEESBSSCGGGSBCTTTTTT-----STTCEEE--EEETCCEEEEEGG------------GTEEEETTSC-----EEEEE
T ss_pred ccccccccchHhhcchhhhhh-----hhcCCeE--EEcCCEEEEEECC------------CCEEEECCCC-----EEECC
Confidence 0000 000000111111100 0122443 7778899999865 5568776654 78999
Q ss_pred EEEEccCCCCCCCCCCCCCcCC--ccceeEEeecCCCC-----CCCCCCeEEEEcCCCCHHHHHHHHhh----hcCeEEE
Q 044575 165 AVVVATGHYSYPRLPSIKGMDK--WKRKQMHSHIYRVP-----EPFRNEVVVVVGNSLSGQDISMELVE----VAKEVHL 233 (454)
Q Consensus 165 ~vViAtG~~~~p~~p~i~G~~~--~~~~~~~~~~~~~~-----~~~~~k~vvVVG~G~sg~e~A~~l~~----~~~~V~l 233 (454)
+|||||| +.|+.|+++|... +...+.......+. ....+++|+|||+|.+|+|+|..|++ .+.+|++
T Consensus 135 ~lviATG--s~p~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~ 212 (493)
T 1m6i_A 135 KCLIATG--GTPRSLSAIDRAGAEVKSRTTLFRKIGDFRSLEKISREVKSITIIGGGFLGSELACALGRKARALGTEVIQ 212 (493)
T ss_dssp EEEECCC--EEECCCHHHHTSCHHHHHTEEECCSHHHHHHHHHHHHHCSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred EEEECCC--CCCCCCCCcccccccccCceEEEcCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEE
Confidence 9999999 8888776555321 11111111111000 01136899999999999999999987 4678999
Q ss_pred ecccCCcC-----ccc----hhhhcc-CCCeEEcCceeEEecC-C--cEEEeCCCEEeeceEEEccCcccCCcCCCC---
Q 044575 234 SAKSLNIS-----EGL----SKVISK-HNNLHLHPQIDCLRED-G--RVTFVDGCWVTADTILYCTGYSYSFPFLDT--- 297 (454)
Q Consensus 234 ~~r~~~~~-----~~~----~~~l~~-~~~i~~~~~v~~v~~~-~--~v~~~dG~~i~~D~vI~atG~~~~~~~l~~--- 297 (454)
+.+.+.+. +.+ .+.+.+ .++++.+..|+++..+ + .|++.||+++++|.||+|+|++|+.+++..
T Consensus 213 v~~~~~~~~~~l~~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~~pn~~l~~~~gl 292 (493)
T 1m6i_A 213 LFPEKGNMGKILPEYLSNWTMEKVRREGVKVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGLEPNVELAKTGGL 292 (493)
T ss_dssp ECSSSSTTTTTSCHHHHHHHHHHHHTTTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECCCEEECCTTHHHHTC
T ss_pred EecCcccccccCCHHHHHHHHHHHHhcCCEEEeCCEEEEEEecCCeEEEEECCCCEEECCEEEECCCCCccHHHHHHcCC
Confidence 98875432 112 222333 3578888899998643 2 477889999999999999999999887531
Q ss_pred -----CCceeeCCCCcccccCcccCCCCCCCceEeccccccc----------chhHHHHHHHHHHHHHcCCC
Q 044575 298 -----KGIVVVDDDRVGPLYEHTFPPSLAPSLSFVGIPRKLI----------GFPFFESQAKWIAQLLSGKR 354 (454)
Q Consensus 298 -----~g~i~v~~~~~~~~~~~~~~~~~~p~l~~iG~~~~~~----------~~~~a~~qa~~~a~~i~g~~ 354 (454)
.|.+.+|+.++ + .|++|++||+...+ .++.|..||+.+|++|.|..
T Consensus 293 ~~~~~~ggi~Vd~~l~----------t-~~~IyA~GD~a~~~~~~~g~~~~~~~~~A~~qg~~aa~ni~g~~ 353 (493)
T 1m6i_A 293 EIDSDFGGFRVNAELQ----------A-RSNIWVAGDAACFYDIKLGRRRVEHHDHAVVSGRLAGENMTGAA 353 (493)
T ss_dssp CBCTTTCSEECCTTCE----------E-ETTEEECGGGEEEEETTTEEECCCCHHHHHHHHHHHHHHHTSCC
T ss_pred ccccCCCcEEECCCcc----------c-CCCeeEeeeeEeccCcccCccccchHHHHHHHHHHHHHHhcCCC
Confidence 25666666543 2 38999999987532 34589999999999999874
No 82
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.96 E-value=5.7e-28 Score=262.28 Aligned_cols=294 Identities=16% Similarity=0.131 Sum_probs=200.6
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKK 90 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (454)
..+||+||||||||++||..|++.|++|+|||+++.+||.|.+ + + + ... .
T Consensus 127 ~~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~~--~-~-k----~~i--------------~-------- 176 (965)
T 2gag_A 127 VHTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLLD--T-A-G----EQI--------------D-------- 176 (965)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGGG--S-S-C----CEE--------------T--------
T ss_pred cCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceecc--C-C-c----ccc--------------C--------
Confidence 4589999999999999999999999999999999999999873 1 0 0 000 0
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHh-CCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEee-cCCCeEEEEEeCEEEE
Q 044575 91 GRDVRRFPGHKELWLYLKDFCQRF-GLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKE-KKADKVVEEVFDAVVV 168 (454)
Q Consensus 91 ~~~~~~~~~~~~~~~yl~~~~~~~-~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~d~vVi 168 (454)
. ....++...+.+....+ ++. ++++++|.+++.......+..... .+.+...+ ...+...++.||+|||
T Consensus 177 -----~-~~~~~~~~~~~~~l~~~~~v~--~~~~~~V~~i~~~~~~~~v~~~~~-~~~v~~~~~~~~~~~~~i~~d~lVl 247 (965)
T 2gag_A 177 -----G-MDSSAWIEQVTSELAEAEETT--HLQRTTVFGSYDANYLIAAQRRTV-HLDGPSGPGVSRERIWHIRAKQVVL 247 (965)
T ss_dssp -----T-EEHHHHHHHHHHHHHHSTTEE--EESSEEEEEEETTTEEEEEEECST-TCSSCCCTTCCSEEEEEEEEEEEEE
T ss_pred -----C-CCHHHHHHHHHHHHhhcCCcE--EEeCCEEEeeecCCceeeeEeecc-cccccccccCCCCceEEEECCEEEE
Confidence 0 01234444444444443 555 778889988864311000000000 11111100 0001223689999999
Q ss_pred ccCCCCCCCCCCCCCcCCccceeEEeec---C-CCCCCCCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCcCccc
Q 044575 169 ATGHYSYPRLPSIKGMDKWKRKQMHSHI---Y-RVPEPFRNEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNISEGL 244 (454)
Q Consensus 169 AtG~~~~p~~p~i~G~~~~~~~~~~~~~---~-~~~~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~~~~~ 244 (454)
||| +.|+.|++||.+. .+ ++++.. + .......+++|+|||+|.+|+|+|..|++.|.+|+++++.+.+.+..
T Consensus 248 ATG--s~p~~~~ipG~~~-~g-v~~~~~~~~~l~~~~~~~gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~~~~ 323 (965)
T 2gag_A 248 ATG--AHERPIVFENNDR-PG-IMLAGAVRSYLNRYGVRAGARIAVATTNDSAYELVRELAATGGVVAVIDARSSISAAA 323 (965)
T ss_dssp CCC--EEECCCCCBTCCS-TT-EEEHHHHHHHHHTTCEESCSSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCCHHH
T ss_pred CCC--CccCCCCCCCCCC-CC-EEEhHHHHHHHHhcCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccchhH
Confidence 999 8899899999764 22 333321 1 11223467899999999999999999999999999999998876542
Q ss_pred hhhhccCCCeEEcCceeEEec--CC---cEEEeC-------C--CEEeeceEEEccCcccCCcCCCC-CCceeeCCCCcc
Q 044575 245 SKVISKHNNLHLHPQIDCLRE--DG---RVTFVD-------G--CWVTADTILYCTGYSYSFPFLDT-KGIVVVDDDRVG 309 (454)
Q Consensus 245 ~~~l~~~~~i~~~~~v~~v~~--~~---~v~~~d-------G--~~i~~D~vI~atG~~~~~~~l~~-~g~i~v~~~~~~ 309 (454)
..+-...++++.+..|+++.. ++ .|++.+ | +++++|.||+|+|++|+..++.. .+.+.+|+....
T Consensus 324 ~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~P~~~l~~~~~g~i~vd~~~~~ 403 (965)
T 2gag_A 324 AQAVADGVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEADVLAVAGGFNPVVHLHSQRQGKLDWDTTIHA 403 (965)
T ss_dssp HHHHHTTCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECCEEECCHHHHHTTCCEEEETTTTE
T ss_pred HHHHhCCeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCCcCcChHHHHhCCCcEEEcCcccc
Confidence 222233468899999999976 33 467765 5 57899999999999999887653 467777775431
Q ss_pred cccCcccCCCCCCCceEecccccccchhHHHHHHHHHHHHHcC
Q 044575 310 PLYEHTFPPSLAPSLSFVGIPRKLIGFPFFESQAKWIAQLLSG 352 (454)
Q Consensus 310 ~~~~~~~~~~~~p~l~~iG~~~~~~~~~~a~~qa~~~a~~i~g 352 (454)
+ .+.++.|+||++|++.....+..|..||+.+|.++.+
T Consensus 404 --~---v~~ts~p~IyAaGD~a~~~~l~~A~~~G~~aA~~i~~ 441 (965)
T 2gag_A 404 --F---VPADAVANQHLAGAMTGRLDTASALSTGAATGAAAAT 441 (965)
T ss_dssp --E---EECSCCTTEEECGGGGTCCSHHHHHHHHHHHHHHHHH
T ss_pred --c---ccCCCCCCEEEEEecCCchhHHHHHHHHHHHHHHHHH
Confidence 0 0114579999999999776667899999999988864
No 83
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=99.95 E-value=8.5e-29 Score=247.72 Aligned_cols=271 Identities=14% Similarity=0.191 Sum_probs=184.0
Q ss_pred CCcEEEECcChHHHHHHHHHHH---cCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRK---EGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVL 88 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~---~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (454)
.++|+|||||++|+++|..|++ .|++|+|||+++... |.......
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~------------------~~~~~~~~-------------- 51 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQ------------------FVPSNPWV-------------- 51 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEE------------------CGGGHHHH--------------
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCc------------------ccCCcccc--------------
Confidence 4799999999999999999999 799999999987421 10000000
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEE
Q 044575 89 KKGRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVV 168 (454)
Q Consensus 89 ~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVi 168 (454)
.......+++..++.+++++.++. +. ..+|+.|+.. ..+|++.++. ++.||+||+
T Consensus 52 -----~~g~~~~~~~~~~l~~~~~~~gv~--~~-~~~v~~id~~------------~~~V~~~~g~-----~i~~d~lvi 106 (437)
T 3sx6_A 52 -----GVGWKERDDIAFPIRHYVERKGIH--FI-AQSAEQIDAE------------AQNITLADGN-----TVHYDYLMI 106 (437)
T ss_dssp -----HHTSSCHHHHEEECHHHHHTTTCE--EE-CSCEEEEETT------------TTEEEETTSC-----EEECSEEEE
T ss_pred -----ccCccCHHHHHHHHHHHHHHCCCE--EE-EeEEEEEEcC------------CCEEEECCCC-----EEECCEEEE
Confidence 001123356666667777777776 43 5789888765 3357776654 689999999
Q ss_pred ccCCCCCCCCCCCCCcCCccceeEEeecCCCCCC--------CCCCeEEEEcCCCCH------HHHHHHHh----hhcCe
Q 044575 169 ATGHYSYPRLPSIKGMDKWKRKQMHSHIYRVPEP--------FRNEVVVVVGNSLSG------QDISMELV----EVAKE 230 (454)
Q Consensus 169 AtG~~~~p~~p~i~G~~~~~~~~~~~~~~~~~~~--------~~~k~vvVVG~G~sg------~e~A~~l~----~~~~~ 230 (454)
||| +.|+.|.+||++.+.+...+.+.+..... .++++++|||+|++| +|+|..++ +.+.+
T Consensus 107 AtG--~~~~~~~ipG~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~g~~G~~~E~a~~la~~l~~~g~~ 184 (437)
T 3sx6_A 107 ATG--PKLAFENVPGSDPHEGPVQSICTVDHAERAFAEYQALLREPGPIVIGAMAGASCFGPAYEYAMIVASDLKKRGMR 184 (437)
T ss_dssp CCC--CEECGGGSTTCSTTTSSEECCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCG
T ss_pred CCC--CCcCcccCCCCCcccCcceecccccHHHHHHHHHHHHHhCCCEEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCc
Confidence 999 89999999998765333332222211100 114567899997654 88886554 44543
Q ss_pred -----EEEecccCCcC----c---c----chhhhcc-CCCeEEcCceeEEecCCcEEEeC---------CCEEeeceEEE
Q 044575 231 -----VHLSAKSLNIS----E---G----LSKVISK-HNNLHLHPQIDCLREDGRVTFVD---------GCWVTADTILY 284 (454)
Q Consensus 231 -----V~l~~r~~~~~----~---~----~~~~l~~-~~~i~~~~~v~~v~~~~~v~~~d---------G~~i~~D~vI~ 284 (454)
|+++++.+.+. + . +.+.+.+ .++++.+..|+++++++ +++.+ ++++++|.+++
T Consensus 185 ~~~~~Vtlv~~~~~~~~~~l~~~~~~~~~~~~~l~~~gI~~~~~~~v~~v~~~~-v~~~~~~~~g~~~~~~~i~~D~vv~ 263 (437)
T 3sx6_A 185 DKIPSFTFITSEPYIGHLGIQGVGDSKGILTKGLKEEGIEAYTNCKVTKVEDNK-MYVTQVDEKGETIKEMVLPVKFGMM 263 (437)
T ss_dssp GGCSCEEEEESSSSTTCTTTTCCTTHHHHHHHHHHHTTCEEECSEEEEEEETTE-EEEEEECTTSCEEEEEEEECSEEEE
T ss_pred ccCcEEEEEcCCccccccccCcchHHHHHHHHHHHHCCCEEEcCCEEEEEECCe-EEEEecccCCccccceEEEEeEEEE
Confidence 99999988651 1 1 1223333 35788888999998764 66665 66789999999
Q ss_pred ccCcccCCcC------CCCCCceeeCCCCcccccCcccCCCCCCCceEeccccccc-------------chhHHHHHHHH
Q 044575 285 CTGYSYSFPF------LDTKGIVVVDDDRVGPLYEHTFPPSLAPSLSFVGIPRKLI-------------GFPFFESQAKW 345 (454)
Q Consensus 285 atG~~~~~~~------l~~~g~i~v~~~~~~~~~~~~~~~~~~p~l~~iG~~~~~~-------------~~~~a~~qa~~ 345 (454)
|+|+.++.++ ++++|.+.+|++.+. .+.|++|++||+...+ ....|..||+.
T Consensus 264 ~~g~~~~~~~~~~~gl~~~~G~i~Vd~~l~t---------~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~qg~~ 334 (437)
T 3sx6_A 264 IPAFKGVPAVAGVEGLCNPGGFVLVDEHQRS---------KKYANIFAAGIAIAIPPVETTPVPTGAPKTGYMIESMVSA 334 (437)
T ss_dssp ECCEECCHHHHTSTTTBCTTSCBCBCTTSBB---------SSCTTEEECGGGBCCCCSCCCSSCCCCCCCHHHHHHHHHH
T ss_pred cCCCcCchhhhccccccCCCCcEEeChhccC---------CCCCCEEEEEEEeccCCcCCCcCCCCCCcHHHHHHHHHHH
Confidence 9999876332 344567777775542 2469999999987532 34589999999
Q ss_pred HHHHHc
Q 044575 346 IAQLLS 351 (454)
Q Consensus 346 ~a~~i~ 351 (454)
+|++|.
T Consensus 335 aA~ni~ 340 (437)
T 3sx6_A 335 AVHNIK 340 (437)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988775
No 84
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=99.95 E-value=9.1e-29 Score=245.56 Aligned_cols=272 Identities=19% Similarity=0.165 Sum_probs=183.7
Q ss_pred CcEEEECcChHHHHHHHHHHH---cCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCC
Q 044575 13 KNVCVIGAGPSGLVAARELRK---EGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLK 89 (454)
Q Consensus 13 ~~VvIIGaG~aGl~aA~~l~~---~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (454)
++|+|||||++|+++|..|++ .|.+|+|||+++.++.... . +.
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~----~-----------------~~------------- 47 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPA----L-----------------PH------------- 47 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCS----S-----------------CC-------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccc----h-----------------hh-------------
Confidence 589999999999999999999 8999999999875422110 0 00
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEc
Q 044575 90 KGRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVA 169 (454)
Q Consensus 90 ~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViA 169 (454)
........+++..++.+.++++++. +..+ +|++++.. ...|++.++. +...++.||+||+|
T Consensus 48 ---~~~~~~~~~~~~~~~~~~~~~~gv~--~~~~-~v~~i~~~------------~~~V~~~~g~-~~~~~~~~d~lViA 108 (409)
T 3h8l_A 48 ---VAIGVRDVDELKVDLSEALPEKGIQ--FQEG-TVEKIDAK------------SSMVYYTKPD-GSMAEEEYDYVIVG 108 (409)
T ss_dssp ---CCSSCCCCCCEEEEHHHHTGGGTCE--EEEC-EEEEEETT------------TTEEEEECTT-SCEEEEECSEEEEC
T ss_pred ---cccCCcCHHHHHHHHHHHHhhCCeE--EEEe-eEEEEeCC------------CCEEEEccCC-cccceeeCCEEEEC
Confidence 0000011122334455566666776 5555 88888754 3457776654 33456899999999
Q ss_pred cCCCCCCCCCCCCCcCCccceeEEeecCCCCCCCC------CCeEEEEcCC-------------------C------CHH
Q 044575 170 TGHYSYPRLPSIKGMDKWKRKQMHSHIYRVPEPFR------NEVVVVVGNS-------------------L------SGQ 218 (454)
Q Consensus 170 tG~~~~p~~p~i~G~~~~~~~~~~~~~~~~~~~~~------~k~vvVVG~G-------------------~------sg~ 218 (454)
|| +.|+.|.+||++. ...+.+.+....... .++++|||+| . .++
T Consensus 109 tG--~~~~~~~ipG~~~---~~~~~~~~~~~~~~~~~l~~~~~~~vViG~G~f~~~~~~~~~~p~~~~p~~~~~~~~~~~ 183 (409)
T 3h8l_A 109 IG--AHLATELVKGWDK---YGYSVCEPEFATKLREKLESFQGGNIAIGSGPFYQGHNPKPKVPENFVPNADSACEGPVF 183 (409)
T ss_dssp CC--CEECGGGSBTHHH---HCEESSSTTHHHHHHHHHHHCCSEEEEEEECCBCCCCSSCCBSCTTSSCCCSCSSCHHHH
T ss_pred CC--CCcCccCCCChhh---cCcCcCCHHHHHHHHHHHHHhcCCeEEEEecccccCCCccccccccccCCCCcccCCHHH
Confidence 99 7899888999764 122222222111111 1567799999 2 378
Q ss_pred HHHHHHh----hhc----CeEEEecccCCcCccch--------hhhcc-CCCeEEcCceeEEecCCcEEEeCCCEEeece
Q 044575 219 DISMELV----EVA----KEVHLSAKSLNISEGLS--------KVISK-HNNLHLHPQIDCLREDGRVTFVDGCWVTADT 281 (454)
Q Consensus 219 e~A~~l~----~~~----~~V~l~~r~~~~~~~~~--------~~l~~-~~~i~~~~~v~~v~~~~~v~~~dG~~i~~D~ 281 (454)
|+|..++ +.| .+|+++.+.+ ..+.+. +.+.+ .++++.+..|+++++++ |+++||+++++|.
T Consensus 184 e~a~~~~~~l~~~g~~~~~~v~~~~~~~-~l~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~-v~~~~g~~~~~D~ 261 (409)
T 3h8l_A 184 EMSLMLHGYFKKKGMLDKVHVTVFSPGE-YLSDLSPNSRKAVASIYNQLGIKLVHNFKIKEIREHE-IVDEKGNTIPADI 261 (409)
T ss_dssp HHHHHHHHHHHTTTCTTTEEEEEECSSS-SSTTBCHHHHHHHHHHHHHHTCEEECSCCEEEECSSE-EEETTSCEEECSE
T ss_pred HHHHHHHHHHHHcCCCCCeEEEEEeCCc-cccccCHHHHHHHHHHHHHCCCEEEcCCceEEECCCe-EEECCCCEEeeeE
Confidence 8886655 455 3899999987 432222 22222 35788889999998764 9999999999999
Q ss_pred EEEccCcccCCcCC--------CCCCceeeCCCCcccccCcccCCCCCCCceEecccccc---cchhHHHHHHHHHHHHH
Q 044575 282 ILYCTGYSYSFPFL--------DTKGIVVVDDDRVGPLYEHTFPPSLAPSLSFVGIPRKL---IGFPFFESQAKWIAQLL 350 (454)
Q Consensus 282 vI~atG~~~~~~~l--------~~~g~i~v~~~~~~~~~~~~~~~~~~p~l~~iG~~~~~---~~~~~a~~qa~~~a~~i 350 (454)
||+|+|+.|+ +++ +++|.+.+|+..+. .+.|++|++||+... .....|+.||+.+|++|
T Consensus 262 vi~a~G~~~~-~~l~~~~~~l~~~~G~i~vd~~~~~---------~~~~~vfa~GD~~~~~~~~~~~~A~~q~~~aa~~i 331 (409)
T 3h8l_A 262 TILLPPYTGN-PALKNSTPDLVDDGGFIPTDLNMVS---------IKYDNVYAVGDANSMTVPKLGYLAVMTGRIAAQHL 331 (409)
T ss_dssp EEEECCEECC-HHHHTSCGGGSCTTSCBCBBTTSBB---------SSCTTEEECGGGBTTCCSCCHHHHHHHHHHHHHHH
T ss_pred EEECCCCCcc-HHHHhccccCcCCCCCEEeCccccc---------CCCCCEEEeehhccCCCCcHHHHHHHHHHHHHHHH
Confidence 9999999987 332 34455666654431 246999999999853 34578999999999988
Q ss_pred cCCC
Q 044575 351 SGKR 354 (454)
Q Consensus 351 ~g~~ 354 (454)
.+.+
T Consensus 332 ~~~l 335 (409)
T 3h8l_A 332 ANRL 335 (409)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 6553
No 85
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=99.95 E-value=1.1e-28 Score=247.59 Aligned_cols=263 Identities=17% Similarity=0.212 Sum_probs=178.5
Q ss_pred CCcEEEECcChHHHHHHHHHHHcC--CcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEG--HRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLK 89 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g--~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (454)
.++|+|||||++|+++|..|++.| .+|+|||+.+.+||.|.+. +.
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~~g-~~-------------------------------- 52 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVRFG-VA-------------------------------- 52 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHHHT-SC--------------------------------
T ss_pred CceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceeecc-cC--------------------------------
Confidence 479999999999999999999998 9999999999999988752 10
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEc
Q 044575 90 KGRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVA 169 (454)
Q Consensus 90 ~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViA 169 (454)
+.++...++..++.++++++++. +++++.|. . . |++.+. .+.||+||+|
T Consensus 53 -----p~~~~~~~~~~~~~~~~~~~gv~--~~~~~~v~------~----------~--V~~~~~------~~~~d~lVlA 101 (460)
T 1cjc_A 53 -----PDHPEVKNVINTFTQTARSDRCA--FYGNVEVG------R----------D--VTVQEL------QDAYHAVVLS 101 (460)
T ss_dssp -----TTCGGGGGHHHHHHHHHTSTTEE--EEBSCCBT------T----------T--BCHHHH------HHHSSEEEEC
T ss_pred -----CCCccHHHHHHHHHHHHHhCCcE--EEeeeEEe------e----------E--EEeccc------eEEcCEEEEe
Confidence 11122345677777777777765 66665441 0 1 222221 3579999999
Q ss_pred cCCCCCC-CCCCCCCcCCccceeEEeecC----------CCC-CCCCCCeEEEEcCCCCHHHHHHHHh------------
Q 044575 170 TGHYSYP-RLPSIKGMDKWKRKQMHSHIY----------RVP-EPFRNEVVVVVGNSLSGQDISMELV------------ 225 (454)
Q Consensus 170 tG~~~~p-~~p~i~G~~~~~~~~~~~~~~----------~~~-~~~~~k~vvVVG~G~sg~e~A~~l~------------ 225 (454)
|| +.| +.|++||.+. .+ ++++..+ ... ..+.+++|+|||+|++|+|+|..|+
T Consensus 102 tG--s~~~~~~~ipG~~~-~g-v~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~ 177 (460)
T 1cjc_A 102 YG--AEDHQALDIPGEEL-PG-VFSARAFVGWYNGLPENRELAPDLSCDTAVILGQGNVALDVARILLTPPDHLEKTDIT 177 (460)
T ss_dssp CC--CCEECCCCCTTTTS-TT-EEEHHHHHHHHTTCGGGTTCCCCTTSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCC
T ss_pred cC--cCCCCCCCCCCCCC-Cc-EEEHHHHHHHhhcCccccccccCCCCCEEEEECCCHHHHHHHHHHhhchhhhcccccc
Confidence 99 664 7788999752 22 3333322 111 1346899999999999999999999
Q ss_pred --------hhcC-eEEEecccCCc--------------Ccc---------c-----------------hh----hhcc--
Q 044575 226 --------EVAK-EVHLSAKSLNI--------------SEG---------L-----------------SK----VISK-- 250 (454)
Q Consensus 226 --------~~~~-~V~l~~r~~~~--------------~~~---------~-----------------~~----~l~~-- 250 (454)
+.+. +|+++.|++.+ .+. + .+ .+.+
T Consensus 178 ~~a~~~l~~~g~~~V~lv~r~~~~~~~ft~~el~~l~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 257 (460)
T 1cjc_A 178 EAALGALRQSRVKTVWIVGRRGPLQVAFTIKELREMIQLPGTRPMLDPADFLGLQDRIKEAARPRKRLMELLLRTATEKP 257 (460)
T ss_dssp HHHHHHHHTCCCCEEEEECSSCGGGCCCCHHHHHHHHTCTTEEEECCGGGGTTHHHHTTTSCHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHhhCCCcEEEEEEcCChHhhccCHHHHHHhhcCCCceeEechhhhcchhhhhhhccHHHHHHHHHHHHHHHhcc
Confidence 4555 79999998764 111 0 01 1111
Q ss_pred -------------CCCeEEcCceeEEecC--C----cEEEe---------------CC--CEEeeceEEEccCcccCCc-
Q 044575 251 -------------HNNLHLHPQIDCLRED--G----RVTFV---------------DG--CWVTADTILYCTGYSYSFP- 293 (454)
Q Consensus 251 -------------~~~i~~~~~v~~v~~~--~----~v~~~---------------dG--~~i~~D~vI~atG~~~~~~- 293 (454)
..+++....+.++..+ + .|.+. +| +++++|.||+|+|++|+.-
T Consensus 258 ~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p~~l~ 337 (460)
T 1cjc_A 258 GVEEAARRASASRAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYKSRPID 337 (460)
T ss_dssp CHHHHHHHHTCSEEEEEECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEECCCCC
T ss_pred ccccccCCCCCCceEEEECCCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCCCCCCCC
Confidence 2356666677777643 2 24443 35 4788999999999999851
Q ss_pred -C--CCCCCceeeCCCCcccccCcccCCCC-CCCceEecccccccc--hhHHHHHHHHHHHHHcC
Q 044575 294 -F--LDTKGIVVVDDDRVGPLYEHTFPPSL-APSLSFVGIPRKLIG--FPFFESQAKWIAQLLSG 352 (454)
Q Consensus 294 -~--l~~~g~i~v~~~~~~~~~~~~~~~~~-~p~l~~iG~~~~~~~--~~~a~~qa~~~a~~i~g 352 (454)
+ +++++.+.+|+..+ +. .|++|++|++...+. +..+..||+.+|.++.+
T Consensus 338 gl~~~d~~g~i~vn~~~r----------t~~~p~vya~Gd~~~g~~~~i~~a~~~g~~aa~~i~~ 392 (460)
T 1cjc_A 338 PSVPFDPKLGVVPNMEGR----------VVDVPGLYCSGWVKRGPTGVITTTMTDSFLTGQILLQ 392 (460)
T ss_dssp TTSCCBTTTTBCCEETTE----------ETTCTTEEECTHHHHCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCcccccCCCeeECCCCc----------CcCCCCEEEEEeCCcCCCccHHHHHHHHHHHHHHHHH
Confidence 1 23334555555443 23 599999999986443 45788999998887754
No 86
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.95 E-value=1.3e-28 Score=259.60 Aligned_cols=261 Identities=17% Similarity=0.117 Sum_probs=193.8
Q ss_pred ccCCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCC
Q 044575 9 CAQSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVL 88 (454)
Q Consensus 9 ~~~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (454)
+...+||+|||||+||++||..|++.|++|+|||+++.+||.|.+....
T Consensus 388 ~~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~~~~~------------------------------- 436 (690)
T 3k30_A 388 KESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQESAL------------------------------- 436 (690)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHHHHTS-------------------------------
T ss_pred ccccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeeeccCC-------------------------------
Confidence 3456899999999999999999999999999999999999998743111
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHh-CCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEE
Q 044575 89 KKGRDVRRFPGHKELWLYLKDFCQRF-GLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVV 167 (454)
Q Consensus 89 ~~~~~~~~~~~~~~~~~yl~~~~~~~-~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vV 167 (454)
+.+....++.+|+....+++ ++. ++++++|. ..+.. ++.||+||
T Consensus 437 ------p~~~~~~~~~~~~~~~~~~~~gv~--~~~~~~v~----------------------~~~~~-----~~~~d~lv 481 (690)
T 3k30_A 437 ------PGLSAWGRVKEYREAVLAELPNVE--IYRESPMT----------------------GDDIV-----EFGFEHVI 481 (690)
T ss_dssp ------TTCGGGGHHHHHHHHHHHTCTTEE--EESSCCCC----------------------HHHHH-----HTTCCEEE
T ss_pred ------CchhHHHHHHHHHHHHHHHcCCCE--EEECCeec----------------------HHHHh-----hcCCCEEE
Confidence 11123367788888888776 554 55554321 11111 45799999
Q ss_pred EccCCCCC--------CCCCCCCCcCCccceeEEeecCCCCCCCCCCeEEEEc--CCCCHHHHHHHHhhhcCeEEEeccc
Q 044575 168 VATGHYSY--------PRLPSIKGMDKWKRKQMHSHIYRVPEPFRNEVVVVVG--NSLSGQDISMELVEVAKEVHLSAKS 237 (454)
Q Consensus 168 iAtG~~~~--------p~~p~i~G~~~~~~~~~~~~~~~~~~~~~~k~vvVVG--~G~sg~e~A~~l~~~~~~V~l~~r~ 237 (454)
+||| +. |..|++||.+. ..++++.++.......+++|+||| +|.+|+|+|..|++.+.+|+++++.
T Consensus 482 lAtG--~~~~~~~~~~~~~~~i~G~~~--~~v~~~~~~l~~~~~~g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~ 557 (690)
T 3k30_A 482 TATG--ATWRTDGVARFHTTALPIAEG--MQVLGPDDLFAGRLPDGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPG 557 (690)
T ss_dssp ECCC--EEECSSCCSSSCSSCCCBCTT--SEEECHHHHHTTCCCSSSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESS
T ss_pred EcCC--CccccccccccCCCCCCCCCC--CcEEcHHHHhCCCCCCCCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecc
Confidence 9999 55 56788888764 345566555545556789999999 9999999999999999999999998
Q ss_pred CCcCccc---------hhhhcc-CCCeEEcCceeEEecCCcEEEe-----CCCEEeeceEEEccCcccCCcCCCCCCcee
Q 044575 238 LNISEGL---------SKVISK-HNNLHLHPQIDCLREDGRVTFV-----DGCWVTADTILYCTGYSYSFPFLDTKGIVV 302 (454)
Q Consensus 238 ~~~~~~~---------~~~l~~-~~~i~~~~~v~~v~~~~~v~~~-----dG~~i~~D~vI~atG~~~~~~~l~~~g~i~ 302 (454)
+.+.+.. .+.+.+ .++++.++.|+++..++ +.+. +++++++|.||+|+|++|+..++...+. .
T Consensus 558 ~~l~~~~~~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~-~~v~~~~~~~~~~i~aD~VV~A~G~~p~~~l~~~l~~-~ 635 (690)
T 3k30_A 558 AQVSSWTNNTFEVNRIQRRLIENGVARVTDHAVVAVGAGG-VTVRDTYASIERELECDAVVMVTARLPREELYLDLVA-R 635 (690)
T ss_dssp SSTTGGGGGGTCHHHHHHHHHHTTCEEEESEEEEEEETTE-EEEEETTTCCEEEEECSEEEEESCEEECCHHHHHHHH-H
T ss_pred cccccccccchhHHHHHHHHHHCCCEEEcCcEEEEEECCe-EEEEEccCCeEEEEECCEEEECCCCCCChHHHHHHhh-h
Confidence 8764322 222333 35788899999998765 4443 4557899999999999999876542110 0
Q ss_pred eCCCCcccccCcccCCCCCCCceEecccccccchhHHHHHHHHHHHHHcCCC
Q 044575 303 VDDDRVGPLYEHTFPPSLAPSLSFVGIPRKLIGFPFFESQAKWIAQLLSGKR 354 (454)
Q Consensus 303 v~~~~~~~~~~~~~~~~~~p~l~~iG~~~~~~~~~~a~~qa~~~a~~i~g~~ 354 (454)
.+ .++.|++|++||+.....+..|..||+.+|.++.+.+
T Consensus 636 ~~-------------~t~~~~VyaiGD~~~~~~~~~A~~~g~~aa~~i~~~l 674 (690)
T 3k30_A 636 RD-------------AGEIASVRGIGDAWAPGTIAAAVWSGRRAAEEFDAVL 674 (690)
T ss_dssp HH-------------HTSCSEEEECGGGTSCBCHHHHHHHHHHHHHHTTCCC
T ss_pred hc-------------ccCCCCEEEEeCCCchhhHHHHHHHHHHHHHHHHhhc
Confidence 00 1456999999999987777789999999999998774
No 87
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.95 E-value=2.1e-28 Score=258.92 Aligned_cols=270 Identities=14% Similarity=0.123 Sum_probs=187.6
Q ss_pred cCCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCC
Q 044575 10 AQSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLK 89 (454)
Q Consensus 10 ~~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (454)
...++|+|||||+||++||..|++.|++|+|||+++.+||.|.+..+.+
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~~~~~p------------------------------- 435 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQVAALP------------------------------- 435 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHHHTTST-------------------------------
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeeecccCC-------------------------------
Confidence 3468999999999999999999999999999999999999998543211
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEc
Q 044575 90 KGRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVA 169 (454)
Q Consensus 90 ~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViA 169 (454)
.++....+.+|+...++.+. ..+..+..+.. ...|++.++. .+.||+||||
T Consensus 436 ------g~~~~~~~~~~~~~~i~~~~-----~~~~~~v~i~~-------------~~~v~~~~~~-----~~~~d~vviA 486 (729)
T 1o94_A 436 ------GLGEWSYHRDYRETQITKLL-----KKNKESQLALG-------------QKPMTADDVL-----QYGADKVIIA 486 (729)
T ss_dssp ------TCGGGHHHHHHHHHHHHHHH-----HHSTTCEEECS-------------CCCCCHHHHH-----TSCCSEEEEC
T ss_pred ------ChHHHHHHHHHHHHHHHHhh-----cccCCceEEEe-------------CeEEehhhcc-----ccCCCEEEEc
Confidence 11122455666666555431 00111122211 1112222222 4679999999
Q ss_pred cCCCCC--------CCCCCCCCcCCccceeEEeecCCCCCCCCCCeEEEEc--CCCCHHHHHHHHhhhcCeEEEecccCC
Q 044575 170 TGHYSY--------PRLPSIKGMDKWKRKQMHSHIYRVPEPFRNEVVVVVG--NSLSGQDISMELVEVAKEVHLSAKSLN 239 (454)
Q Consensus 170 tG~~~~--------p~~p~i~G~~~~~~~~~~~~~~~~~~~~~~k~vvVVG--~G~sg~e~A~~l~~~~~~V~l~~r~~~ 239 (454)
|| +. |..|++||.+.+...+++..++.......+++|+||| +|.+|+|+|..|++.|++|+++++.+
T Consensus 487 tG--~~~~~~~~~~p~~~~ipG~~~~~~~v~~~~~~l~~~~~~gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~- 563 (729)
T 1o94_A 487 TG--ARWNTDGTNCLTHDPIPGADASLPDQLTPEQVMDGKKKIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH- 563 (729)
T ss_dssp CC--EEECSSCCCTTTSSCCTTCCTTSTTEECHHHHHHCCSCCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-
T ss_pred CC--CCcccccccCccCCCCCCccccCCCEEEHHHHhcCCCCCCCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-
Confidence 99 55 5678899987544455565554444445789999999 99999999999999999999999988
Q ss_pred cCc---------cchhhhc-cCCCeEEcCceeEEecCCcEEEe----CC-CE------------------EeeceEEEcc
Q 044575 240 ISE---------GLSKVIS-KHNNLHLHPQIDCLREDGRVTFV----DG-CW------------------VTADTILYCT 286 (454)
Q Consensus 240 ~~~---------~~~~~l~-~~~~i~~~~~v~~v~~~~~v~~~----dG-~~------------------i~~D~vI~at 286 (454)
+.+ .+.+.+. ..++++.+..++++..++ +.+. ++ ++ +++|.||+|+
T Consensus 564 l~~~~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~~~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~ 642 (729)
T 1o94_A 564 LANYMHFTLEYPNMMRRLHELHVEELGDHFCSRIEPGR-MEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVT 642 (729)
T ss_dssp TTHHHHHTTCHHHHHHHHHHTTCEEECSEEEEEEETTE-EEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEES
T ss_pred ccccccccccHHHHHHHHHhCCCEEEcCcEEEEEECCe-EEEEEecCCceEEecccccccccccCCcceeeeCCEEEECC
Confidence 532 1222232 345788888899997654 4432 33 22 8999999999
Q ss_pred CcccCCcCCCCCCceeeCCCCcccccCcccCCCCCCCceEecccccccchhHHHHHHHHHHHHHcCCC
Q 044575 287 GYSYSFPFLDTKGIVVVDDDRVGPLYEHTFPPSLAPSLSFVGIPRKLIGFPFFESQAKWIAQLLSGKR 354 (454)
Q Consensus 287 G~~~~~~~l~~~g~i~v~~~~~~~~~~~~~~~~~~p~l~~iG~~~~~~~~~~a~~qa~~~a~~i~g~~ 354 (454)
|++|+.+++..- ...+|+... ++.|++|++||+.....+..|..||+.+|.+|.+..
T Consensus 643 G~~p~~~l~~~l-~~~vd~~~~----------t~~~~VyAiGD~~~~~~~~~A~~~G~~aA~~i~~~l 699 (729)
T 1o94_A 643 GRHSECTLWNEL-KARESEWAE----------NDIKGIYLIGDAEAPRLIADATFTGHRVAREIEEAN 699 (729)
T ss_dssp CEEECCHHHHHH-HHTGGGTGG----------GTCCEEEECGGGTSCCCHHHHHHHHHHHHHTTTSSC
T ss_pred CCCCChHHHHHH-hhhcccccc----------cCCCCeEEEeCccchhhHHHHHHHHHHHHHHhhhhc
Confidence 999998765421 111232221 346999999999876667789999999999997754
No 88
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.94 E-value=5.5e-27 Score=246.50 Aligned_cols=247 Identities=20% Similarity=0.330 Sum_probs=179.7
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKK 90 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (454)
..+||+|||||+||++||..|++.|++|+|||+++.+||.|.+....+.
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~~~~~~~~------------------------------- 420 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAKQIPG------------------------------- 420 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHHHTTSTT-------------------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeeeccccCCC-------------------------------
Confidence 4589999999999999999999999999999999999999875322110
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEE-EeCEEEEc
Q 044575 91 GRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEE-VFDAVVVA 169 (454)
Q Consensus 91 ~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~d~vViA 169 (454)
.....++.+++.+.++++++. +++++.|.. . .+ .||+||||
T Consensus 421 ------~~~~~~~~~~~~~~~~~~gv~--~~~~~~v~~-------------------------~-----~~~~~d~lviA 462 (671)
T 1ps9_A 421 ------KEEFYETLRYYRRMIEVTGVT--LKLNHTVTA-------------------------D-----QLQAFDETILA 462 (671)
T ss_dssp ------CTTHHHHHHHHHHHHHHHTCE--EEESCCCCS-------------------------S-----SSCCSSEEEEC
T ss_pred ------HHHHHHHHHHHHHHHHHcCCE--EEeCcEecH-------------------------H-----HhhcCCEEEEc
Confidence 011245666777777888876 666664321 0 12 69999999
Q ss_pred cCCCCCCCCCCCCCcCCccceeEEeecCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhhcC--------------------
Q 044575 170 TGHYSYPRLPSIKGMDKWKRKQMHSHIYRVPEPFRNEVVVVVGNSLSGQDISMELVEVAK-------------------- 229 (454)
Q Consensus 170 tG~~~~p~~p~i~G~~~~~~~~~~~~~~~~~~~~~~k~vvVVG~G~sg~e~A~~l~~~~~-------------------- 229 (454)
|| +.|+.|++||.+. ..++++.++.......+++|+|||+|.+|+|+|..|++.|.
T Consensus 463 tG--~~p~~~~i~G~~~--~~v~~~~~~l~~~~~~~~~VvVIGgG~~g~E~A~~l~~~G~~vtv~~~~~~~~~g~~~~~~ 538 (671)
T 1ps9_A 463 SG--IVPRTPPIDGIDH--PKVLSYLDVLRDKAPVGNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSLQ 538 (671)
T ss_dssp CC--EEECCCCCBTTTS--TTEEEHHHHHTSCCCCCSEEEEECCHHHHHHHHHHHTCCSSCGGGCHHHHHHHTTBCTTCC
T ss_pred cC--CCcCCCCCCCCCC--CcEeeHHHHhhCCCCCCCeEEEECCChhHHHHHHHHHhcCCCcccchhhhhhhhccccccc
Confidence 99 8999999999865 23455544443444578999999999999999999998764
Q ss_pred -----------------eEEEecccCCcC-ccc--------hhhhc-cCCCeEEcCceeEEecCCcEEE-eCC--CEEee
Q 044575 230 -----------------EVHLSAKSLNIS-EGL--------SKVIS-KHNNLHLHPQIDCLREDGRVTF-VDG--CWVTA 279 (454)
Q Consensus 230 -----------------~V~l~~r~~~~~-~~~--------~~~l~-~~~~i~~~~~v~~v~~~~~v~~-~dG--~~i~~ 279 (454)
+|+++.+.+... ..+ .+.+. ..++++.+..|+++.+++ +++ .+| +++++
T Consensus 539 ~~~~~~~~~~~~~~~~~~v~l~~~~~~~l~~~l~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~-v~~~~~G~~~~i~~ 617 (671)
T 1ps9_A 539 QAGGLSPQGMQIPRSPRQIVMLQRKASKPGQGLGKTTGWIHRTTLLSRGVKMIPGVSYQKIDDDG-LHVVINGETQVLAV 617 (671)
T ss_dssp SGGGBCTTCCCCCCCSSEEEEECSSCSCTTTTSCTTTHHHHHHHHHHTTCEEECSCEEEEEETTE-EEEEETTEEEEECC
T ss_pred ccccccccccccCCCCcEEEEEEecchhhccccccccHHHHHHHHHhcCCEEEeCcEEEEEeCCe-EEEecCCeEEEEeC
Confidence 455555544321 111 22233 235788888899998664 666 688 56889
Q ss_pred ceEEEccCcccCCcCCCCCCceeeCCCCcccccCcccCCCCCCCceEecccccccc--hhHHHHHHHHHHHHH
Q 044575 280 DTILYCTGYSYSFPFLDTKGIVVVDDDRVGPLYEHTFPPSLAPSLSFVGIPRKLIG--FPFFESQAKWIAQLL 350 (454)
Q Consensus 280 D~vI~atG~~~~~~~l~~~g~i~v~~~~~~~~~~~~~~~~~~p~l~~iG~~~~~~~--~~~a~~qa~~~a~~i 350 (454)
|.||+|+|++|+..++.. + + ...+++|++||+..... ...|..||..+|.+|
T Consensus 618 D~Vi~a~G~~p~~~l~~~---l--~--------------~~g~~v~aiGD~~~~~~~~~~~A~~~g~~aA~~i 671 (671)
T 1ps9_A 618 DNVVICAGQEPNRALAQP---L--I--------------DSGKTVHLIGGCDVAMELDARRAIAQGTRLALEI 671 (671)
T ss_dssp SEEEECCCEEECCTTHHH---H--H--------------TTTCCEEECGGGTCCSSCCHHHHHHHHHHHHHHC
T ss_pred CEEEECCCccccHHHHHH---H--H--------------hcCCCEEEECCcCccCchhHHHHHHHHHHHHHhC
Confidence 999999999999776542 0 0 01268999999986543 678999999999864
No 89
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.93 E-value=6.2e-26 Score=247.99 Aligned_cols=264 Identities=17% Similarity=0.196 Sum_probs=175.8
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCC-cEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGH-RVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKK 90 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~-~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (454)
.+||+||||||||++||..|++.|+ +|+|||+.+.+||.+.+.
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~~~~------------------------------------ 230 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSE------------------------------------ 230 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHHHHT------------------------------------
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCcccccc------------------------------------
Confidence 5799999999999999999999999 799999999999987642
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEcc
Q 044575 91 GRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVAT 170 (454)
Q Consensus 91 ~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAt 170 (454)
.+.|....++.++..++.+++++. +++++.|.. +.+++.++. ++.||+|||||
T Consensus 231 ---ip~~~~~~~~~~~~~~~~~~~gv~--~~~~~~v~~-----------------~~v~~~~~~-----~~~~d~vvlAt 283 (1025)
T 1gte_A 231 ---IPQFRLPYDVVNFEIELMKDLGVK--IICGKSLSE-----------------NEITLNTLK-----EEGYKAAFIGI 283 (1025)
T ss_dssp ---SCTTTSCHHHHHHHHHHHHTTTCE--EEESCCBST-----------------TSBCHHHHH-----HTTCCEEEECC
T ss_pred ---CCcccCCHHHHHHHHHHHHHCCcE--EEcccEecc-----------------ceEEhhhcC-----ccCCCEEEEec
Confidence 011111245666667777777776 677765521 112222221 35699999999
Q ss_pred CCCC-CCCCCCC-CCcCCccceeEEeecC---------------CCCCCCCCCeEEEEcCCCCHHHHHHHHhhhcC-eEE
Q 044575 171 GHYS-YPRLPSI-KGMDKWKRKQMHSHIY---------------RVPEPFRNEVVVVVGNSLSGQDISMELVEVAK-EVH 232 (454)
Q Consensus 171 G~~~-~p~~p~i-~G~~~~~~~~~~~~~~---------------~~~~~~~~k~vvVVG~G~sg~e~A~~l~~~~~-~V~ 232 (454)
| + .|+.+++ +|++...+ ++++.++ +......+++|+|||||.+|+|+|..+.+.|. +||
T Consensus 284 G--a~~p~~l~~~~G~~~~~g-v~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~VvVIGgG~~g~e~A~~~~~~G~~~Vt 360 (1025)
T 1gte_A 284 G--LPEPKTDDIFQGLTQDQG-FYTSKDFLPLVAKSSKAGMCACHSPLPSIRGAVIVLGAGDTAFDCATSALRCGARRVF 360 (1025)
T ss_dssp C--CCEECCCGGGTTCCTTTT-EEEHHHHHHHHHHHHCBTTBSCCCCCCCCCSEEEEECSSHHHHHHHHHHHHTTCSEEE
T ss_pred C--CCCCCCCCCCCCCCCCCC-EEEhHHHHHHHHhhcccccccccccccccCCcEEEECCChHHHHHHHHHHHcCCCEEE
Confidence 9 6 5776654 46543222 2332221 11112236799999999999999999999985 899
Q ss_pred EecccCC-cCccchh----hhccCCCeEEcCceeEEec-CCc---EEEe------C-------C--CEEeeceEEEccCc
Q 044575 233 LSAKSLN-ISEGLSK----VISKHNNLHLHPQIDCLRE-DGR---VTFV------D-------G--CWVTADTILYCTGY 288 (454)
Q Consensus 233 l~~r~~~-~~~~~~~----~l~~~~~i~~~~~v~~v~~-~~~---v~~~------d-------G--~~i~~D~vI~atG~ 288 (454)
+++|++. ..+.+.+ ...+.++++....+.++.. ++. |++. + | .++++|.||+|+|+
T Consensus 361 vv~r~~~~~~~~~~~e~~~~~~~Gv~~~~~~~~~~i~~~~g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~ 440 (1025)
T 1gte_A 361 LVFRKGFVNIRAVPEEVELAKEEKCEFLPFLSPRKVIVKGGRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGS 440 (1025)
T ss_dssp EECSSCGGGCCSCHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCE
T ss_pred EEEecChhhCCCCHHHHHHHHHcCCEEEeCCCceEEEccCCeEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCC
Confidence 9999873 3332222 2223345656666666653 222 3332 2 2 26789999999999
Q ss_pred ccC-CcCC--------CCCCceeeCC-CCcccccCcccCCCCCCCceEeccccccc-chhHHHHHHHHHHHHHc
Q 044575 289 SYS-FPFL--------DTKGIVVVDD-DRVGPLYEHTFPPSLAPSLSFVGIPRKLI-GFPFFESQAKWIAQLLS 351 (454)
Q Consensus 289 ~~~-~~~l--------~~~g~i~v~~-~~~~~~~~~~~~~~~~p~l~~iG~~~~~~-~~~~a~~qa~~~a~~i~ 351 (454)
+|+ ..++ +++|.+.+|+ ... ++.|++|++||+...+ ....|..||+.+|++|.
T Consensus 441 ~~~~~~l~~~~~gl~~~~~G~I~vd~~~~~----------Ts~~~VfA~GD~~~~~~~~~~A~~~G~~aA~~i~ 504 (1025)
T 1gte_A 441 VLRDPKVKEALSPIKFNRWDLPEVDPETMQ----------TSEPWVFAGGDIVGMANTTVESVNDGKQASWYIH 504 (1025)
T ss_dssp ECCCHHHHHHTTTSCBCTTSSBCCCTTTCB----------CSSTTEEECSGGGCSCCCHHHHHHHHHHHHHHHH
T ss_pred CCCchhhhhcccCceECCCCCEEECCCCCc----------cCCCCEEEeCCCCCCchHHHHHHHHHHHHHHHHH
Confidence 864 3332 2345555554 222 4579999999998744 45788899999998885
No 90
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=99.93 E-value=4.3e-25 Score=218.53 Aligned_cols=278 Identities=18% Similarity=0.155 Sum_probs=171.1
Q ss_pred CCcEEEECcChHHHHHHHHHHHcC--CcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEG--HRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLK 89 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g--~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (454)
.|+|||||||+||+++|.+|++.+ .+|+|||+++...... +............
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p------------------~~~~v~~g~~~~~------- 56 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCY------------------MSNEVIGGDRELA------- 56 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECST------------------THHHHHHTSSCGG-------
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCcc------------------CHHHHhcCCCCHH-------
Confidence 378999999999999999999875 5899999976421110 0000000000000
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEc
Q 044575 90 KGRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVA 169 (454)
Q Consensus 90 ~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViA 169 (454)
++...+..+ ...++. ....+|++|+.. ..+|++.++. ++.||+||||
T Consensus 57 ------------~~~~~~~~~-~~~gv~---~i~~~v~~id~~------------~~~v~~~~g~-----~i~yd~LviA 103 (401)
T 3vrd_B 57 ------------SLRVGYDGL-RAHGIQ---VVHDSALGIDPD------------KKLVKTAGGA-----EFAYDRCVVA 103 (401)
T ss_dssp ------------GGEECSHHH-HHTTCE---EECSCEEEEETT------------TTEEEETTSC-----EEECSEEEEC
T ss_pred ------------HHhhCHHHH-HHCCCE---EEEeEEEEEEcc------------CcEEEecccc-----eeecceeeec
Confidence 000001112 234554 345688898865 4457777665 7899999999
Q ss_pred cCCCCCCCCCCCCCcCCccce-eEEeecCCC--------CCCCCCCeEEEEcCCC-------CHHHHHHH----Hhhh--
Q 044575 170 TGHYSYPRLPSIKGMDKWKRK-QMHSHIYRV--------PEPFRNEVVVVVGNSL-------SGQDISME----LVEV-- 227 (454)
Q Consensus 170 tG~~~~p~~p~i~G~~~~~~~-~~~~~~~~~--------~~~~~~k~vvVVG~G~-------sg~e~A~~----l~~~-- 227 (454)
|| +.++.|.+||.++..+. ..|+..... ...+.....+|+++|. .+.|++.+ +.+.
T Consensus 104 tG--~~~~~~~i~G~~e~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~i~~~~a~~e~~~~~a~~~~~~~~ 181 (401)
T 3vrd_B 104 PG--IDLLYDKIEGYSEALAAKLPHAWKAGEQTALLRRQLESMDDGGVVIIAPPAPPFRCPPGPYERASQIAHYLKAHKS 181 (401)
T ss_dssp CC--EEECGGGSBTCCSGGGGTSCCCSSCSHHHHHHHHHHHHSCTTCEEEEECCSSSCBCTTHHHHHHHHHHHHHHHHCT
T ss_pred cC--CccccCCccCchhhcccCccceeccHHHHHHHHHHHHhcccCCcEEEecCCccEEeehHHHHHHHHHHHHHHhcCC
Confidence 99 89999999998764322 122211100 0112223444444433 23444444 4444
Q ss_pred cCeEEEecccCCc--Cccc----hhhh----ccC-CCeEEcCceeEEecCC---cEEEeCCCEEeeceEEEccCcccCC-
Q 044575 228 AKEVHLSAKSLNI--SEGL----SKVI----SKH-NNLHLHPQIDCLREDG---RVTFVDGCWVTADTILYCTGYSYSF- 292 (454)
Q Consensus 228 ~~~V~l~~r~~~~--~~~~----~~~l----~~~-~~i~~~~~v~~v~~~~---~v~~~dG~~i~~D~vI~atG~~~~~- 292 (454)
..+|+++.+.+.+ .+.+ .+.+ .+. ++++.+..+..++.+. .|.+.+|+++++|.+++++|.+|+.
T Consensus 182 ~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~v~~v~~~~~~~~v~~~~g~~i~~D~vi~~~g~~~~~~ 261 (401)
T 3vrd_B 182 KSKVIILDNSQTFSKQAQFTKGWERLYGFGTENALIEWHPGPDAAVVKTDTEAMTVETSFGETFKAAVINLIPPQRAGKI 261 (401)
T ss_dssp TCEEEEECSSSSCTTHHHHHHHHHHHSCTTSTTCSEEEECTTTTCEEEEETTTTEEEETTSCEEECSEEEECCCEEECHH
T ss_pred CCEEEEEcccccccccccccHHHHHHHHHHHHhcCcEEEeCceEEEEEecccceEEEcCCCcEEEeeEEEEecCcCCchh
Confidence 3689999988775 2222 2222 222 3577777777775332 6888999999999999999999872
Q ss_pred ----cCCCCCCceeeCCCCcccccCcccCCCCCCCceEeccccccc----chhHHHHHHHHHHHHHc----CCCCCC
Q 044575 293 ----PFLDTKGIVVVDDDRVGPLYEHTFPPSLAPSLSFVGIPRKLI----GFPFFESQAKWIAQLLS----GKRTLP 357 (454)
Q Consensus 293 ----~~l~~~g~i~v~~~~~~~~~~~~~~~~~~p~l~~iG~~~~~~----~~~~a~~qa~~~a~~i~----g~~~lp 357 (454)
.+.+++|.|.||+... ..+.+|++|++||+.... +...|..||+++|++|. |+...|
T Consensus 262 ~~~~gl~~~~G~i~VD~~tl--------~~t~~p~VfAiGDva~~~~~pk~a~~A~~qa~v~A~ni~~~l~G~~~~~ 330 (401)
T 3vrd_B 262 AQSASLTNDSGWCPVDIRTF--------ESSLQPGIHVIGDACNAAPMPKSAYSANSQAKVAAAAVVALLKGEEPGT 330 (401)
T ss_dssp HHHTTCCCTTSSBCBCTTTC--------BBSSSTTEEECGGGBCCTTSCBSHHHHHHHHHHHHHHHHHHHHTCCCCC
T ss_pred HhhccccccCCCEEECCCcc--------eecCCCCEEEecccccCCCCCchHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 2244667788876532 114579999999987532 34688999999998764 665444
No 91
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=99.92 E-value=1.6e-26 Score=230.84 Aligned_cols=266 Identities=15% Similarity=0.168 Sum_probs=168.3
Q ss_pred CcEEEECcChHHHHHHHHHHH--cCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCC
Q 044575 13 KNVCVIGAGPSGLVAARELRK--EGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKK 90 (454)
Q Consensus 13 ~~VvIIGaG~aGl~aA~~l~~--~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (454)
+||+|||||++|+++|..|++ .|++|+|||+++.+++..... . ........
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~~--------------~----~~~g~~~~--------- 55 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFP--------------H----LAMGWRKF--------- 55 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHH--------------H----HHHTCSCG---------
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCcc--------------h----hccCccCH---------
Confidence 689999999999999999999 789999999988654321100 0 00000000
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEcc
Q 044575 91 GRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVAT 170 (454)
Q Consensus 91 ~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAt 170 (454)
+++...+.+++++.++. +. ..+|+.++.. ..+|++.++. ++.||+||+||
T Consensus 56 ----------~~~~~~~~~~~~~~gv~--~~-~~~v~~id~~------------~~~v~~~~g~-----~i~~d~liiAt 105 (430)
T 3h28_A 56 ----------EDISVPLAPLLPKFNIE--FI-NEKAESIDPD------------ANTVTTQSGK-----KIEYDYLVIAT 105 (430)
T ss_dssp ----------GGSEEESTTTGGGGTEE--EE-CSCEEEEETT------------TTEEEETTCC-----EEECSEEEECC
T ss_pred ----------HHHHHHHHHHHHhcCCE--EE-EEEEEEEECC------------CCEEEECCCc-----EEECCEEEEcC
Confidence 11111112233344554 44 3588888754 3356666544 68999999999
Q ss_pred CCCCCCCCCCCCCcCCccceeEEeecCCCCC--------CCCCCeEEEEcCCCCH------HHHHHHHh----hhc----
Q 044575 171 GHYSYPRLPSIKGMDKWKRKQMHSHIYRVPE--------PFRNEVVVVVGNSLSG------QDISMELV----EVA---- 228 (454)
Q Consensus 171 G~~~~p~~p~i~G~~~~~~~~~~~~~~~~~~--------~~~~k~vvVVG~G~sg------~e~A~~l~----~~~---- 228 (454)
| +.|..| |+.. .+...+........ ..++++++|||+|++| +|+|..++ +.+
T Consensus 106 G--~~~~~p---g~~~-~g~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~~~~G~~~E~a~~la~~l~~~g~~~~ 179 (430)
T 3h28_A 106 G--PKLVFG---AEGQ-EENSTSICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYK 179 (430)
T ss_dssp C--CEEECC---SBTH-HHHSCCCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGG
T ss_pred C--cccccC---CCCC-cCCccCcCCHHHHHHHHHHHHHHHhcCCeEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCccc
Confidence 9 777766 4322 11111111110000 0113567899998765 89886655 444
Q ss_pred CeEEEecccCCcC----c-------cchhhhcc-CCCeEEcCceeEEecCCcEEEeC----CCEEeeceEEEccCcccCC
Q 044575 229 KEVHLSAKSLNIS----E-------GLSKVISK-HNNLHLHPQIDCLREDGRVTFVD----GCWVTADTILYCTGYSYSF 292 (454)
Q Consensus 229 ~~V~l~~r~~~~~----~-------~~~~~l~~-~~~i~~~~~v~~v~~~~~v~~~d----G~~i~~D~vI~atG~~~~~ 292 (454)
.+|+++.+.+.+. + .+.+.+.+ .++++.+..|++++.++ +++++ |+++++|.||+|+|+.++.
T Consensus 180 ~~V~~v~~~~~~~~~~l~~~~~~~~~l~~~l~~~GV~i~~~~~v~~v~~~~-v~~~~~~~~g~~i~~D~vv~a~G~~~~~ 258 (430)
T 3h28_A 180 VPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERNIDWIANVAVKAIEPDK-VIYEDLNGNTHEVPAKFTMFMPSFQGPE 258 (430)
T ss_dssp CCEEEECSSSSTTCTTTTCSTTHHHHHHHHHHHTTCEEECSCEEEEECSSE-EEEECTTSCEEEEECSEEEEECEEECCH
T ss_pred eEEEEecCCccccccccCcchHHHHHHHHHHHHCCCEEEeCCEEEEEeCCe-EEEEecCCCceEEeeeEEEECCCCccch
Confidence 4799999887651 1 12233333 35788899999997664 88887 7789999999999998762
Q ss_pred c-------CCCCCC-ceeeCCCCcccccCcccCCCCCCCceEeccccccc-------------chhHHHHHHHHHHHHHc
Q 044575 293 P-------FLDTKG-IVVVDDDRVGPLYEHTFPPSLAPSLSFVGIPRKLI-------------GFPFFESQAKWIAQLLS 351 (454)
Q Consensus 293 ~-------~l~~~g-~i~v~~~~~~~~~~~~~~~~~~p~l~~iG~~~~~~-------------~~~~a~~qa~~~a~~i~ 351 (454)
. .++++| ++.+|+..+. .+.|++|++||+...+ ....|..||+.+|++|.
T Consensus 259 ~l~~~~~gl~~~~G~~i~Vd~~l~t---------~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~~g~~aa~ni~ 329 (430)
T 3h28_A 259 VVASAGDKVANPANKMVIVNRCFQN---------PTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIV 329 (430)
T ss_dssp HHHTTCTTTBCTTTCCBCCCTTSBC---------SSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHH
T ss_pred hHhhccccCcCCCCCEEecCccccC---------CCCCCEEEEEeeeccCCccCCCCCCCCCchHHHHHHHHHHHHHHHH
Confidence 1 233456 6666665441 2569999999987532 34688999999887764
No 92
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.92 E-value=3.6e-25 Score=224.38 Aligned_cols=255 Identities=17% Similarity=0.136 Sum_probs=173.7
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKKG 91 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (454)
.+||+|||||++|+++|.+|++. ++|+|||+++.+||.|.+... . .+ +++
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~~~~---------~-----------~~---g~~------ 157 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWLKGI---------K-----------QE---GFN------ 157 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGGTCS---------E-----------ET---TTT------
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeecccc---------c-----------cC---CCC------
Confidence 47999999999999999999999 999999999999998874210 0 00 000
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccC
Q 044575 92 RDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATG 171 (454)
Q Consensus 92 ~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG 171 (454)
. ...++...+.+.. ..++. ++++++|.+|+.... .+.+...+. +....+.||+||+|||
T Consensus 158 ----~--~~~~~~~~l~~~l-~~~v~--~~~~~~v~~i~~~~~----------~~~~~~~~~--~~~~~~~~d~lvlAtG 216 (493)
T 1y56_A 158 ----K--DSRKVVEELVGKL-NENTK--IYLETSALGVFDKGE----------YFLVPVVRG--DKLIEILAKRVVLATG 216 (493)
T ss_dssp ----E--EHHHHHHHHHHTC-CTTEE--EETTEEECCCEECSS----------SEEEEEEET--TEEEEEEESCEEECCC
T ss_pred ----C--CHHHHHHHHHHHH-hcCCE--EEcCCEEEEEEcCCc----------EEEEEEecC--CeEEEEECCEEEECCC
Confidence 0 1233333332222 22433 678899988887543 455544332 2334689999999999
Q ss_pred CCCCCCCCCCCCcCCccceeEEeecCC----CCCCCCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCcCccchhh
Q 044575 172 HYSYPRLPSIKGMDKWKRKQMHSHIYR----VPEPFRNEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNISEGLSKV 247 (454)
Q Consensus 172 ~~~~p~~p~i~G~~~~~~~~~~~~~~~----~~~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~~~~~~~~ 247 (454)
+.|+.|.+||.+. .+ +++...+. ......+++++|||+|.+|+| ..+.+
T Consensus 217 --a~~~~~~~~g~~~-~g-v~~~~~~~~~~~~~~~~~~~~vvViGgG~~gle--~~l~~--------------------- 269 (493)
T 1y56_A 217 --AIDSTMLFENNDM-PG-VFRRDFALEVMNVWEVAPGRKVAVTGSKADEVI--QELER--------------------- 269 (493)
T ss_dssp --EEECCCCCTTTTS-TT-EEEHHHHHHHHHTSCBCSCSEEEEESTTHHHHH--HHHHH---------------------
T ss_pred --CCccCCCCCCCCC-CC-EEEcHHHHHHHHhcccCCCCEEEEECCCHHHHH--HHHHh---------------------
Confidence 8899888998753 22 23322211 112345799999999999998 22222
Q ss_pred hccCCCeEEcCceeEEecCC---cEEEeCCCEEeeceEEEccCcccCCcCCCCC---------Ccee-eCCCCcccccCc
Q 044575 248 ISKHNNLHLHPQIDCLREDG---RVTFVDGCWVTADTILYCTGYSYSFPFLDTK---------GIVV-VDDDRVGPLYEH 314 (454)
Q Consensus 248 l~~~~~i~~~~~v~~v~~~~---~v~~~dG~~i~~D~vI~atG~~~~~~~l~~~---------g~i~-v~~~~~~~~~~~ 314 (454)
..++++.+..|+++..++ .|.+.+|+++++|.||+|+|++|+.+++... |.+. +|+...
T Consensus 270 --~GV~v~~~~~v~~i~~~~~v~~v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~~g~~~~~~~~g~i~~vd~~~~------ 341 (493)
T 1y56_A 270 --WGIDYVHIPNVKRVEGNEKVERVIDMNNHEYKVDALIFADGRRPDINPITQAGGKLRFRRGYYSPVLDEYHR------ 341 (493)
T ss_dssp --HTCEEEECSSEEEEECSSSCCEEEETTCCEEECSEEEECCCEEECCHHHHHTTCCEEEETTEEEECCCTTSE------
T ss_pred --CCcEEEeCCeeEEEecCCceEEEEeCCCeEEEeCEEEECCCcCcCchHHHhcCCCccccCCceeeccccccC------
Confidence 223566667777776543 3667789999999999999999998775432 2232 233221
Q ss_pred ccCCCCCCCceEecccccccchhHHHHHHHHHHHHHcCCCCCC
Q 044575 315 TFPPSLAPSLSFVGIPRKLIGFPFFESQAKWIAQLLSGKRTLP 357 (454)
Q Consensus 315 ~~~~~~~p~l~~iG~~~~~~~~~~a~~qa~~~a~~i~g~~~lp 357 (454)
+.|++|++|++........|..||+.+|.++.+.....
T Consensus 342 -----s~~~vya~GD~~~~~~~~~A~~~g~~aa~~i~~~lg~~ 379 (493)
T 1y56_A 342 -----IKDGIYVAGSAVSIKPHYANYLEGKLVGAYILKEFGYD 379 (493)
T ss_dssp -----EETTEEECSTTTCCCCHHHHHHHHHHHHHHHHHHTTCC
T ss_pred -----cCCCEEEEeccCCccCHHHHHHHHHHHHHHHHHHcCCC
Confidence 24899999999977777889999999999997765443
No 93
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=99.91 E-value=3.2e-26 Score=228.35 Aligned_cols=268 Identities=16% Similarity=0.216 Sum_probs=160.7
Q ss_pred CcEEEECcChHHHHHHHHHHHcC--CcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCC
Q 044575 13 KNVCVIGAGPSGLVAARELRKEG--HRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKK 90 (454)
Q Consensus 13 ~~VvIIGaG~aGl~aA~~l~~~g--~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (454)
++|||||||+||++||++|++.+ .+|+|||++++.. |..+........+...+...+
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~------------------~~p~l~~v~~g~~~~~~i~~~--- 61 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFG------------------FTPAFPHLAMGWRKFEDISVP--- 61 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEE------------------CGGGHHHHHHTCSCGGGSEEE---
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCc------------------cCccHHHHhcCCCCHHHhhhc---
Confidence 57999999999999999999875 7999999987431 111111111111111111111
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEcc
Q 044575 91 GRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVAT 170 (454)
Q Consensus 91 ~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAt 170 (454)
+.++.++.++. + ...+|++|+.. ..+|++.++. ++.||+|||||
T Consensus 62 ----------------~~~~~~~~gv~--~-i~~~v~~Id~~------------~~~V~~~~g~-----~i~YD~LViAt 105 (430)
T 3hyw_A 62 ----------------LAPLLPKFNIE--F-INEKAESIDPD------------ANTVTTQSGK-----KIEYDYLVIAT 105 (430)
T ss_dssp ----------------STTTGGGGTEE--E-ECSCEEEEETT------------TTEEEETTCC-----EEECSEEEECC
T ss_pred ----------------HHHHHHHCCcE--E-EEeEEEEEECC------------CCEEEECCCC-----EEECCEEEEeC
Confidence 11223334544 3 35589999865 4568887765 78999999999
Q ss_pred CCCCCCCCCCCCCcCCccceeE---EeecCCC--CCCCCCCeEEEEcCCC------CHHHHHHHHh----hh----cCeE
Q 044575 171 GHYSYPRLPSIKGMDKWKRKQM---HSHIYRV--PEPFRNEVVVVVGNSL------SGQDISMELV----EV----AKEV 231 (454)
Q Consensus 171 G~~~~p~~p~i~G~~~~~~~~~---~~~~~~~--~~~~~~k~vvVVG~G~------sg~e~A~~l~----~~----~~~V 231 (454)
| +.+. +++||.++...... +....+. .+...++.++|+|++. .+.|+|..+. +. ..+|
T Consensus 106 G--~~~~-~~i~G~~e~~~~~~~~~~a~~~~~~l~~~~~~~~~vv~gg~~gve~~~~~~e~a~~~~~~l~~~g~~~~v~v 182 (430)
T 3hyw_A 106 G--PKLV-FGAEGQEENSTSICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPM 182 (430)
T ss_dssp C--CEEE-CCSBTHHHHSCCCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCE
T ss_pred C--CCcc-CCccCcccCcCCcccHHHHHHHHHHHHhhccCCceEEEeCCCcEEEhHHHHHHHHHHHHHHHHhccccccee
Confidence 9 6654 45788654211100 0000000 0011234556666553 1234444433 22 2468
Q ss_pred EEecccCCcCc-------c----chhhhcc-CCCeEEcCceeEEecCCcEEEeC--C--CEEeeceEEEccCcccCCcCC
Q 044575 232 HLSAKSLNISE-------G----LSKVISK-HNNLHLHPQIDCLREDGRVTFVD--G--CWVTADTILYCTGYSYSFPFL 295 (454)
Q Consensus 232 ~l~~r~~~~~~-------~----~~~~l~~-~~~i~~~~~v~~v~~~~~v~~~d--G--~~i~~D~vI~atG~~~~~~~l 295 (454)
+++...+.+.+ . +.+.+.+ .++++.+..|++++.++ +++.+ | +++++|.+|+++|.+|+ +++
T Consensus 183 ~~~~~~~~l~~~~~~~~~~~~~~l~~~l~~~GV~~~~~~~v~~v~~~~-~~~~~~~g~~~~i~~d~vi~~~G~~~~-~~~ 260 (430)
T 3hyw_A 183 TFITSEPYLGHFGVGGIGASKRLVEDLFAERNIDWIANVAVKAIEPDK-VIYEDLNGNTHEVPAKFTMFMPSFQGP-EVV 260 (430)
T ss_dssp EEECSSSSTTCTTTTCSTTHHHHHHHHHHHTTCEEECSCEEEEECSSE-EEEECTTSCEEEEECSEEEEECEEECC-HHH
T ss_pred eeecccchhhhccchhhHHHHHHHHHHHHhCCeEEEeCceEEEEeCCc-eEEEeeCCCceEeecceEEEeccCCCc-hHH
Confidence 88887665421 1 2223333 35888999999997664 66664 3 36889999999999987 332
Q ss_pred C---------CCCceeeCCCCcccccCcccCCCCCCCceEeccccccc-------------chhHHHHHHHHHHHHHc
Q 044575 296 D---------TKGIVVVDDDRVGPLYEHTFPPSLAPSLSFVGIPRKLI-------------GFPFFESQAKWIAQLLS 351 (454)
Q Consensus 296 ~---------~~g~i~v~~~~~~~~~~~~~~~~~~p~l~~iG~~~~~~-------------~~~~a~~qa~~~a~~i~ 351 (454)
. .++.+.+|++++. +++|++|++||+...+ +.+.|..||+++|++|.
T Consensus 261 ~~~~~~l~~~~~g~i~vd~~lq~---------t~~~~IfAiGD~a~~p~~~~~~~~~~~pk~a~~A~~qg~~~A~Ni~ 329 (430)
T 3hyw_A 261 ASAGDKVANPANKMVIVNRCFQN---------PTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIV 329 (430)
T ss_dssp HTTCTTTBCTTTCCBCCCTTSBC---------SSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHH
T ss_pred HhcccccccCCceEEEecccccC---------CCCCCEEEeccEEecCCcccCcCcCccchHHHHHHHHHHHHHHHHH
Confidence 1 2345566655442 3568999999987532 22489999999998875
No 94
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.61 E-value=1.6e-18 Score=166.28 Aligned_cols=152 Identities=15% Similarity=0.118 Sum_probs=108.5
Q ss_pred CCcEEEECcChHHHHHHHHHHH--cCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRK--EGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLK 89 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~--~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (454)
.+||+||||||||++||.+|++ .|++|+|||+.+.+||.+.+..+..++ ..+
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~~~~~~~~----------------~~l---------- 118 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSA----------------MVM---------- 118 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCSTTCCC----------------EEE----------
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEeCCccCCH----------------HHH----------
Confidence 5799999999999999999975 499999999999999988765443221 000
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEc
Q 044575 90 KGRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVA 169 (454)
Q Consensus 90 ~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViA 169 (454)
...+..+.+++++. +..+. . .....+.++++
T Consensus 119 --------------~~~~~~~~~e~Gv~--~~~~~--------------------~-------------~~~~~~~~~~~ 149 (326)
T 3fpz_A 119 --------------RKPAHLFLQELEIP--YEDEG--------------------D-------------YVVVKHAALFI 149 (326)
T ss_dssp --------------ETTTHHHHHHTTCC--CEECS--------------------S-------------EEEESCHHHHH
T ss_pred --------------HHHHHHHHHHcCCE--EEECC--------------------c-------------ceecceeEEEE
Confidence 00112334455654 22111 0 02234445667
Q ss_pred cCCCCCCCCCCCCCcCCccceeEEeecCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCc
Q 044575 170 TGHYSYPRLPSIKGMDKWKRKQMHSHIYRVPEPFRNEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNI 240 (454)
Q Consensus 170 tG~~~~p~~p~i~G~~~~~~~~~~~~~~~~~~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~ 240 (454)
++ ..++.+.++|...+.+........+....+.+++++|||+|.+++|.|..+...+.++++..+....
T Consensus 150 ~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viggg~~av~~a~~~~~~~~~v~i~~~~~~~ 218 (326)
T 3fpz_A 150 ST--VLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCAMDPNVIELAGYKN 218 (326)
T ss_dssp HH--HHHHHHTSTTEEEETTEEEEEEEEESSCSSSSCEEEEEEEEEHHHHTCTTSSSCCCCEEEEESCBCT
T ss_pred cc--hhhhccccccceeecccccceeeccCCcccCCCEEEEEccCceeeehhhhhhhccCcEEEEeecccc
Confidence 77 6677778888887777766666666666678899999999999999999999999999998876543
No 95
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.58 E-value=9.4e-16 Score=150.85 Aligned_cols=149 Identities=23% Similarity=0.345 Sum_probs=90.2
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCcccccc-ccceecCCcc------------c
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVY-ASLRLTSPRE------------I 78 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~-~~~~~~~~~~------------~ 78 (454)
.+||+|||||++|+++|..|++.|.+|+|||+++.+|+.|...+.......+.... .......+.. .
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 83 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWDF 83 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHHH
Confidence 47999999999999999999999999999999988866543221100000000000 0000000000 0
Q ss_pred cc---cCCCCCCCCCCCCCCCCC--CHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeec
Q 044575 79 MG---YTDFPFVLKKGRDVRRFP--GHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEK 153 (454)
Q Consensus 79 ~~---~~~~~~~~~~~~~~~~~~--~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~ 153 (454)
+. -.+.++... .....|+ ...++.+++.+.+++.++. ++++++|+++...+++ ..+ .|.|++.++
T Consensus 84 ~~~~~~~Gi~~~~~--~~g~~~p~~~~~~l~~~L~~~~~~~Gv~--i~~~~~v~~i~~~~~g-----~~~-~~~v~~~~g 153 (401)
T 2gqf_A 84 ISLVAEQGITYHEK--ELGQLFCDEGAEQIVEMLKSECDKYGAK--ILLRSEVSQVERIQND-----EKV-RFVLQVNST 153 (401)
T ss_dssp HHHHHHTTCCEEEC--STTEEEETTCTHHHHHHHHHHHHHHTCE--EECSCCEEEEEECCSC-----SSC-CEEEEETTE
T ss_pred HHHHHhCCCceEEC--cCCEEccCCCHHHHHHHHHHHHHHCCCE--EEeCCEEEEEEcccCc-----CCC-eEEEEECCC
Confidence 00 001111110 0112233 5688899999999999987 9999999999865210 001 677765432
Q ss_pred CCCeEEEEEeCEEEEccCCCCCC
Q 044575 154 KADKVVEEVFDAVVVATGHYSYP 176 (454)
Q Consensus 154 ~~~~~~~~~~d~vViAtG~~~~p 176 (454)
++.+|+||+|||.++.|
T Consensus 154 ------~i~ad~VVlAtG~~s~p 170 (401)
T 2gqf_A 154 ------QWQCKNLIVATGGLSMP 170 (401)
T ss_dssp ------EEEESEEEECCCCSSCG
T ss_pred ------EEECCEEEECCCCccCC
Confidence 68999999999965544
No 96
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.51 E-value=3e-14 Score=124.17 Aligned_cols=133 Identities=19% Similarity=0.256 Sum_probs=100.0
Q ss_pred eEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCcC---------ccc---------hh----hhcc-CCCeEEcCceeEE
Q 044575 207 VVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNIS---------EGL---------SK----VISK-HNNLHLHPQIDCL 263 (454)
Q Consensus 207 ~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~~---------~~~---------~~----~l~~-~~~i~~~~~v~~v 263 (454)
+|+|||+|++|+++|..|++.+.+|+++++.+.+. +.+ .+ .+.+ ..+++.+ .|+++
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~v~~~-~v~~i 81 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGVSRVPNYPGLLDEPSGEELLRRLEAHARRYGAEVRPG-VVKGV 81 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTCSCCCCSTTCTTCCCHHHHHHHHHHHHHHTTCEEEEC-CCCEE
T ss_pred eEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCchhhhccCCCcCCCCHHHHHHHHHHHHHHcCCEEEeC-EEEEE
Confidence 69999999999999999999999999999876443 112 11 1222 2467777 88888
Q ss_pred ecCC---cEEEeCCCEEeeceEEEccCcccCCc-C----CCCCCceeeCCCCcccccCcccCCCCCCCceEeccccccc-
Q 044575 264 REDG---RVTFVDGCWVTADTILYCTGYSYSFP-F----LDTKGIVVVDDDRVGPLYEHTFPPSLAPSLSFVGIPRKLI- 334 (454)
Q Consensus 264 ~~~~---~v~~~dG~~i~~D~vI~atG~~~~~~-~----l~~~g~i~v~~~~~~~~~~~~~~~~~~p~l~~iG~~~~~~- 334 (454)
..++ .|.+.+| ++++|.||+|+|..|++. . ++ +|.+.+|+... ++.|++|++||+...+
T Consensus 82 ~~~~~~~~v~~~~g-~i~ad~vI~A~G~~~~~~~~~g~~~~-~g~i~vd~~~~----------t~~~~i~a~GD~~~~~~ 149 (180)
T 2ywl_A 82 RDMGGVFEVETEEG-VEKAERLLLCTHKDPTLPSLLGLTRR-GAYIDTDEGGR----------TSYPRVYAAGVARGKVP 149 (180)
T ss_dssp EECSSSEEEECSSC-EEEEEEEEECCTTCCHHHHHHTCCEE-TTEECCCTTCB----------CSSTTEEECGGGGTCCS
T ss_pred EEcCCEEEEEECCC-EEEECEEEECCCCCCCccccCCCCcc-CceEEeCCCCC----------cCCCCEEEeecccCcch
Confidence 7533 4666677 899999999999998641 1 23 56676776554 4569999999998764
Q ss_pred -chhHHHHHHHHHHHHHcC
Q 044575 335 -GFPFFESQAKWIAQLLSG 352 (454)
Q Consensus 335 -~~~~a~~qa~~~a~~i~g 352 (454)
..+.|..||+.+|.++.+
T Consensus 150 ~~~~~A~~~g~~aa~~i~~ 168 (180)
T 2ywl_A 150 GHAIISAGDGAYVAVHLVS 168 (180)
T ss_dssp CCHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHhHHHHHHHHHH
Confidence 557899999999988864
No 97
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.45 E-value=5e-15 Score=148.88 Aligned_cols=307 Identities=15% Similarity=0.099 Sum_probs=155.2
Q ss_pred cEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCC-----CC-CCCCccccccccce---------------e
Q 044575 14 NVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDP-----NT-DQTEVHSSVYASLR---------------L 72 (454)
Q Consensus 14 ~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~-----~~-~~~~~~~~~~~~~~---------------~ 72 (454)
||+|||||++|+++|..|++.|.+|+|+||. ..||.-.+.. +. +.+.......+.+. .
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~-~~~g~s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~v~~~~~ 79 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR-IDGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVTS 79 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS-TTCSSGGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCchHHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHHHHHHHH
Confidence 7999999999999999999999999999998 5555421110 00 00000000000000 0
Q ss_pred cCCcccccc--CCCCCCCC----CCCCCC-----CCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCC
Q 044575 73 TSPREIMGY--TDFPFVLK----KGRDVR-----RFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGN 141 (454)
Q Consensus 73 ~~~~~~~~~--~~~~~~~~----~~~~~~-----~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~ 141 (454)
+.+..+..+ .+.++... .+...+ .-....++...+.+.+++.++. +.++++| ++...++.
T Consensus 80 ~~~~~i~~l~~~Gv~~~~~~~~~~g~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~--i~~~~~v-~l~~~~~~------ 150 (472)
T 2e5v_A 80 EAKNVIETFESWGFEFEEDLRLEGGHTKRRVLHRTDETGREIFNFLLKLAREEGIP--IIEDRLV-EIRVKDGK------ 150 (472)
T ss_dssp HHHHHHHHHHHTTCCCCSSCBCCTTCSSCCEECSSSCHHHHHHHHHHHHHHHTTCC--EECCCEE-EEEEETTE------
T ss_pred HHHHHHHHHHHcCCCCCcccccccCcCcCcEEEeCCCCHHHHHHHHHHHHHhCCCE--EEECcEE-EEEEeCCE------
Confidence 000000000 01222110 000000 0123567778888777778887 8899999 98765321
Q ss_pred cCCcEEEEEeecCCCeEEEEEeCEEEEccCCCCCCCCCCCC-CcCCccceeEEee-----cCCCCCCCCCC-eEEEEcCC
Q 044575 142 DLIKWVVKSKEKKADKVVEEVFDAVVVATGHYSYPRLPSIK-GMDKWKRKQMHSH-----IYRVPEPFRNE-VVVVVGNS 214 (454)
Q Consensus 142 ~~~~~~v~~~~~~~~~~~~~~~d~vViAtG~~~~p~~p~i~-G~~~~~~~~~~~~-----~~~~~~~~~~k-~vvVVG~G 214 (454)
-.-+.+.+.+ + ++.+|.||+||| ..+..+.++ +.....+..+... ...+.+..+.. +++++|+|
T Consensus 151 ---v~Gv~v~~~~-g---~~~a~~VVlAtG--g~~~~~~~~~~~~~~tGdgi~~a~~aGa~~~d~e~~q~~p~~~~~ggg 221 (472)
T 2e5v_A 151 ---VTGFVTEKRG-L---VEDVDKLVLATG--GYSYLYEYSSTQSTNIGDGMAIAFKAGTILADMEFVQFHPTVTSLDGE 221 (472)
T ss_dssp ---EEEEEETTTE-E---ECCCSEEEECCC--CCGGGSSSBSSCTTCSCHHHHHHHHTTCCEECTTCEEEEEEEECGGGC
T ss_pred ---EEEEEEEeCC-C---eEEeeeEEECCC--CCcccCccccCCCCCchHHHHHHHHcCCCEeCCcceEEEeEEEccCCC
Confidence 1123332211 1 466999999999 555444332 1111222211100 01111211112 34556766
Q ss_pred CCHHHHHHHHhhhcCeEEEecccCCcCccchhhhccCC-CeEEcCceeEEecCCcEEEeCC------CEEe-eceEEEcc
Q 044575 215 LSGQDISMELVEVAKEVHLSAKSLNISEGLSKVISKHN-NLHLHPQIDCLREDGRVTFVDG------CWVT-ADTILYCT 286 (454)
Q Consensus 215 ~sg~e~A~~l~~~~~~V~l~~r~~~~~~~~~~~l~~~~-~i~~~~~v~~v~~~~~v~~~dG------~~i~-~D~vI~at 286 (454)
+++++..+...|..+ +..+.+++.+.+.+...... .+....-..++...+.|.+... +.++ .|.++.++
T Consensus 222 --~~~~ae~~~~~G~~~-v~~~g~rf~~~~~~~~el~~rd~v~~~i~~~~~~~~~v~ld~~~~~~~~~~~~~~~~~~~~~ 298 (472)
T 2e5v_A 222 --VFLLTETLRGEGAQI-INENGERFLFNYDKRGELAPRDILSRAIYIEMLKGHKVFIDLSKIEDFERKFPVVAKYLARH 298 (472)
T ss_dssp --CEECCTHHHHTTCEE-EETTCCCGGGGTCTTGGGSCHHHHHHHHHHHHHHTCCEEEECTTCTTHHHHCHHHHHHHHHT
T ss_pred --ceeeehhhcCCceEE-ECCCCCCCCccCCcccCcCchhHHHHHHHHHHHhCCcEEEeccchHHHHHHhHHHHHHHHHh
Confidence 889888888888877 67777776543322110000 0000000000001111222111 1233 57788889
Q ss_pred CcccCCcCCC-------CCCceeeCCCCcccccCcccCCCCCCCceEeccccc-cc-----chhHHH----HHHHHHHHH
Q 044575 287 GYSYSFPFLD-------TKGIVVVDDDRVGPLYEHTFPPSLAPSLSFVGIPRK-LI-----GFPFFE----SQAKWIAQL 349 (454)
Q Consensus 287 G~~~~~~~l~-------~~g~i~v~~~~~~~~~~~~~~~~~~p~l~~iG~~~~-~~-----~~~~a~----~qa~~~a~~ 349 (454)
|..|+ ..+. ..|.|.+|.+.+ +..|+||++|++.. .. ....+. ..++.++++
T Consensus 299 G~dp~-~~i~v~p~~~~~~GGI~vd~~~~----------t~ipgLyAaGd~a~~~~hg~~rl~~~sl~~~~v~G~~a~~~ 367 (472)
T 2e5v_A 299 GHNYK-VKIPIFPAAHFVDGGIRVNIRGE----------SNIVNLYAIGEVSDSGLHGANRLASNSLLEGLVFGINLPRY 367 (472)
T ss_dssp TCCTT-SCEECEEEEEEESCEEECCTTCB----------CSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHGGGT
T ss_pred CcCcc-cceEeehhhceeCCCeEECCCCc----------cccCCEEecchhcccccCCCCCCCcccHHHHHHHHHHHHHH
Confidence 99998 5433 247788888766 35699999999876 32 112333 346666666
Q ss_pred HcCC
Q 044575 350 LSGK 353 (454)
Q Consensus 350 i~g~ 353 (454)
+++.
T Consensus 368 ~a~~ 371 (472)
T 2e5v_A 368 VDSS 371 (472)
T ss_dssp TTSC
T ss_pred HHhh
Confidence 6554
No 98
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.39 E-value=1.7e-12 Score=128.05 Aligned_cols=149 Identities=21% Similarity=0.264 Sum_probs=91.2
Q ss_pred ccCCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCcccc-ccccceecCCccc---------
Q 044575 9 CAQSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSS-VYASLRLTSPREI--------- 78 (454)
Q Consensus 9 ~~~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~-~~~~~~~~~~~~~--------- 78 (454)
|+..+||+|||||++|++||..|++.|.+|+|||+.+.+|+.+...+.......... .........+...
T Consensus 24 ~~~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~ 103 (417)
T 3v76_A 24 VAEKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRP 103 (417)
T ss_dssp ----CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCH
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCH
Confidence 345689999999999999999999999999999999988765532211100000000 0000000001000
Q ss_pred ---ccc---CCCCCCCCCCCCCCCC--CCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEE
Q 044575 79 ---MGY---TDFPFVLKKGRDVRRF--PGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKS 150 (454)
Q Consensus 79 ---~~~---~~~~~~~~~~~~~~~~--~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~ 150 (454)
..+ .+.++... .....| ....++.+.+.+.+++.++. ++++++|++|...++ .|.|.+
T Consensus 104 ~~~~~~~~~~Gi~~~~~--~~g~~~~~~~~~~l~~~L~~~l~~~Gv~--i~~~~~V~~i~~~~~----------~~~V~~ 169 (417)
T 3v76_A 104 QDFVALVERHGIGWHEK--TLGQLFCDHSAKDIIRMLMAEMKEAGVQ--LRLETSIGEVERTAS----------GFRVTT 169 (417)
T ss_dssp HHHHHHHHHTTCCEEEC--STTEEEESSCHHHHHHHHHHHHHHHTCE--EECSCCEEEEEEETT----------EEEEEE
T ss_pred HHHHHHHHHcCCCcEEe--eCCEEeeCCCHHHHHHHHHHHHHHCCCE--EEECCEEEEEEEeCC----------EEEEEE
Confidence 000 01111110 011112 24568899999999988987 999999999987643 677776
Q ss_pred eecCCCeEEEEEeCEEEEccCCCCCCC
Q 044575 151 KEKKADKVVEEVFDAVVVATGHYSYPR 177 (454)
Q Consensus 151 ~~~~~~~~~~~~~d~vViAtG~~~~p~ 177 (454)
.++ ++.+|+||+|||.++.|.
T Consensus 170 ~~g------~i~ad~VIlAtG~~S~p~ 190 (417)
T 3v76_A 170 SAG------TVDAASLVVASGGKSIPK 190 (417)
T ss_dssp TTE------EEEESEEEECCCCSSCGG
T ss_pred CCc------EEEeeEEEECCCCccCCC
Confidence 543 689999999999766544
No 99
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.32 E-value=3.9e-12 Score=110.62 Aligned_cols=118 Identities=29% Similarity=0.402 Sum_probs=84.3
Q ss_pred CcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCCCC
Q 044575 13 KNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKKGR 92 (454)
Q Consensus 13 ~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (454)
+||+|||||++|+.+|..|++.|.+|+++|+.+.. +... ..+..++++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~---~~~~---------------------~~~~~~~~~-------- 49 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSK---VKGV---------------------SRVPNYPGL-------- 49 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCT---TTTC---------------------SCCCCSTTC--------
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCc---ccCc---------------------hhhhccCCC--------
Confidence 68999999999999999999999999999997632 1000 000011111
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccCC
Q 044575 93 DVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATGH 172 (454)
Q Consensus 93 ~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG~ 172 (454)
+......++.+++.+.+++.++. ++++ +|++++..++ .|.|++.++ ++.+|.||+|+|
T Consensus 50 --~~~~~~~~~~~~l~~~~~~~gv~--v~~~-~v~~i~~~~~----------~~~v~~~~g------~i~ad~vI~A~G- 107 (180)
T 2ywl_A 50 --LDEPSGEELLRRLEAHARRYGAE--VRPG-VVKGVRDMGG----------VFEVETEEG------VEKAERLLLCTH- 107 (180)
T ss_dssp --TTCCCHHHHHHHHHHHHHHTTCE--EEEC-CCCEEEECSS----------SEEEECSSC------EEEEEEEEECCT-
T ss_pred --cCCCCHHHHHHHHHHHHHHcCCE--EEeC-EEEEEEEcCC----------EEEEEECCC------EEEECEEEECCC-
Confidence 11235688999999999999987 8888 9999987543 677766432 689999999999
Q ss_pred CCCCCCCCCCCcC
Q 044575 173 YSYPRLPSIKGMD 185 (454)
Q Consensus 173 ~~~p~~p~i~G~~ 185 (454)
..|+++...|++
T Consensus 108 -~~~~~~~~~g~~ 119 (180)
T 2ywl_A 108 -KDPTLPSLLGLT 119 (180)
T ss_dssp -TCCHHHHHHTCC
T ss_pred -CCCCccccCCCC
Confidence 666554333443
No 100
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.28 E-value=9.1e-12 Score=127.41 Aligned_cols=182 Identities=15% Similarity=0.114 Sum_probs=102.5
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC-CCCcccccCCCCCCCC-ccc-cccccceecCCc--------ccc
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH-DVGGQWLYDPNTDQTE-VHS-SVYASLRLTSPR--------EIM 79 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~-~~GG~w~~~~~~~~~~-~~~-~~~~~~~~~~~~--------~~~ 79 (454)
..+||+|||||+||++||..|++.|.+|+|||++. .+|. .+|.++.- ... .....+.. ... ...
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~----~~Cnps~ggia~~~lv~ei~a-lgg~~~~~~d~~gi 101 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQ----MSCNPAIGGIGKGHLVKEVDA-LGGLMAKAIDQAGI 101 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTC----CSSSSEEESTTHHHHHHHHHH-TTCSHHHHHHHHEE
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeeccccccc----ccccccccchhhHHHHHHHHH-hccHHHHHhhhccc
Confidence 45899999999999999999999999999999974 3442 12222110 000 00000000 000 000
Q ss_pred ccCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHH-hCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCe
Q 044575 80 GYTDFPFVLKKGRD-VRRFPGHKELWLYLKDFCQR-FGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADK 157 (454)
Q Consensus 80 ~~~~~~~~~~~~~~-~~~~~~~~~~~~yl~~~~~~-~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 157 (454)
.|............ ......+..+...+.+.+++ .++. + ++++|+.+...++. -+.|.+.++.
T Consensus 102 ~f~~l~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~--I-~~~~V~~L~~e~g~---------V~GV~t~dG~--- 166 (651)
T 3ces_A 102 QFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLM--I-FQQAVEDLIVENDR---------VVGAVTQMGL--- 166 (651)
T ss_dssp EEEEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEE--E-EECCEEEEEESSSB---------EEEEEETTSE---
T ss_pred chhhhhcccCcccccchhhCCHHHHHHHHHHHHHhCCCCE--E-EEEEEEEEEecCCE---------EEEEEECCCC---
Confidence 00000000000000 00112446777888888876 4665 5 67899998765432 3456665432
Q ss_pred EEEEEeCEEEEccCCCCCCCCCCCCCcCCccceeEEeecCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEecc
Q 044575 158 VVEEVFDAVVVATGHYSYPRLPSIKGMDKWKRKQMHSHIYRVPEPFRNEVVVVVGNSLSGQDISMELVEVAKEVHLSAK 236 (454)
Q Consensus 158 ~~~~~~d~vViAtG~~~~p~~p~i~G~~~~~~~~~~~~~~~~~~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r 236 (454)
++.+|.||+||| +.+..+.++|...+. +.+ +| |.+|+++|..|.+.|.+|+.+..
T Consensus 167 --~I~Ad~VVLATG--t~s~~~~i~G~~~~~----------------~gr---iG-g~~a~eLA~~L~~lG~~v~~~~t 221 (651)
T 3ces_A 167 --KFRAKAVVLTVG--TFLDGKIHIGLDNYS----------------GGR---AG-DPPSIPLSRRLRELPLRVGRLKT 221 (651)
T ss_dssp --EEEEEEEEECCS--TTTCCEEECC---------------------------------CCHHHHHHHTTTCCEEEECC
T ss_pred --EEECCEEEEcCC--CCccCccccCcccCC----------------CCC---cc-chhhhHHHHHHHhcCCeEEEecC
Confidence 689999999999 666666666765321 123 56 78999999999999999988753
No 101
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.25 E-value=3.8e-11 Score=108.91 Aligned_cols=124 Identities=21% Similarity=0.072 Sum_probs=80.2
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKKG 91 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (454)
.+||+|||||++|+++|..|++.|.+|+|||+.....|.|. .+..... ....+. ..+.+ .
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~~~-~~~~~~~-----~~~~~~-------~~~~d----~--- 62 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMPF-LPPKPPF-----PPGSLL-------ERAYD----P--- 62 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCS-SCCCSCC-----CTTCHH-------HHHCC----T---
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCccc-Ccccccc-----chhhHH-------hhhcc----C---
Confidence 47999999999999999999999999999999844334321 1110000 000000 00000 0
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHh-CCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEcc
Q 044575 92 RDVRRFPGHKELWLYLKDFCQRF-GLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVAT 170 (454)
Q Consensus 92 ~~~~~~~~~~~~~~yl~~~~~~~-~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAt 170 (454)
. -+.+.++..++.+.+++. ++. ++ +++|+++...++. -+.|.+.++. ++.+|+||+||
T Consensus 63 -~---g~~~~~~~~~l~~~~~~~~gv~--i~-~~~v~~i~~~~~~---------v~~v~~~~g~-----~i~a~~VV~A~ 121 (232)
T 2cul_A 63 -K---DERVWAFHARAKYLLEGLRPLH--LF-QATATGLLLEGNR---------VVGVRTWEGP-----PARGEKVVLAV 121 (232)
T ss_dssp -T---CCCHHHHHHHHHHHHHTCTTEE--EE-ECCEEEEEEETTE---------EEEEEETTSC-----CEECSEEEECC
T ss_pred -C---CCCHHHHHHHHHHHHHcCCCcE--EE-EeEEEEEEEeCCE---------EEEEEECCCC-----EEECCEEEECC
Confidence 0 115678888998888876 765 55 6789999875432 3556665543 68999999999
Q ss_pred CCCCCC
Q 044575 171 GHYSYP 176 (454)
Q Consensus 171 G~~~~p 176 (454)
|.++..
T Consensus 122 G~~s~~ 127 (232)
T 2cul_A 122 GSFLGA 127 (232)
T ss_dssp TTCSSC
T ss_pred CCChhh
Confidence 954433
No 102
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.25 E-value=5.8e-11 Score=116.50 Aligned_cols=145 Identities=19% Similarity=0.204 Sum_probs=90.3
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCC------C-----ccccccccceecCCccc--
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQT------E-----VHSSVYASLRLTSPREI-- 78 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~------~-----~~~~~~~~~~~~~~~~~-- 78 (454)
.+||+|||||++|+++|..|++.|++|+|||+.+.+|+........... . .....+.......+...
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRP 83 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHHhhhhcceEEEEcCCCCEE
Confidence 3799999999999999999999999999999998776643322111100 0 00000111111111100
Q ss_pred cccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEE-EEEeecCCCe
Q 044575 79 MGYTDFPFVLKKGRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWV-VKSKEKKADK 157 (454)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~-v~~~~~~~~~ 157 (454)
..+...... ........+..+.++|.+.+.+.++. ++++++|+++...++ .++ |++... +.
T Consensus 84 ~~~~~~~~~----~~~~~~~~~~~l~~~L~~~~~~~gv~--i~~~~~v~~i~~~~~----------~v~gv~~~~~--~~ 145 (397)
T 3cgv_A 84 IILQSEKAG----NEVGYVLERDKFDKHLAALAAKAGAD--VWVKSPALGVIKENG----------KVAGAKIRHN--NE 145 (397)
T ss_dssp EEEC---------CCCEEEECHHHHHHHHHHHHHHHTCE--EESSCCEEEEEEETT----------EEEEEEEEET--TE
T ss_pred EEEeccccC----CceeEEEeHHHHHHHHHHHHHhCCCE--EEECCEEEEEEEeCC----------EEEEEEEEEC--Ce
Confidence 000000000 01122346778889999999888887 899999999987643 565 776543 23
Q ss_pred EEEEEeCEEEEccCCCC
Q 044575 158 VVEEVFDAVVVATGHYS 174 (454)
Q Consensus 158 ~~~~~~d~vViAtG~~~ 174 (454)
..++.+|.||.|+|.++
T Consensus 146 ~~~~~a~~vV~A~G~~s 162 (397)
T 3cgv_A 146 IVDVRAKMVIAADGFES 162 (397)
T ss_dssp EEEEEEEEEEECCCTTC
T ss_pred EEEEEcCEEEECCCcch
Confidence 45789999999999654
No 103
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.24 E-value=2.5e-11 Score=118.78 Aligned_cols=148 Identities=18% Similarity=0.201 Sum_probs=87.2
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCC-----------CCccccccccceecCCccccc
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQ-----------TEVHSSVYASLRLTSPREIMG 80 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~ 80 (454)
.|||+||||||||+++|..|++.|++|+||||++.+|.........+. ...........+...+.....
T Consensus 4 ~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (397)
T 3oz2_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRP 83 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCceecccCHHHHHHcCCCchhhhhhcccceEEEEeCCCceE
Confidence 589999999999999999999999999999998877542111100000 000000011111111111100
Q ss_pred cCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEE
Q 044575 81 YTDFPFVLKKGRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVE 160 (454)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 160 (454)
.. ++... .+........+..+...|.+.+.+.+.. ++++++|+.+...++. ...+.... ++...+
T Consensus 84 ~~-~~~~~-~~~~~~~~i~R~~~~~~L~~~a~~~G~~--~~~~~~v~~~~~~~~~---------~~~v~~~~--~~~~~~ 148 (397)
T 3oz2_A 84 II-LQSEK-AGNEVGYVLERDKFDKHLAALAAKAGAD--VWVKSPALGVIKENGK---------VAGAKIRH--NNEIVD 148 (397)
T ss_dssp EE-EECSS-SSCCCEEEECHHHHHHHHHHHHHHHTCE--EESSCCEEEEEEETTE---------EEEEEEEE--TTEEEE
T ss_pred ee-ccccc-cCCceeEEEEHHHHHHHHHHHHHhcCcE--Eeeeeeeeeeeeccce---------eeeeeecc--cccceE
Confidence 00 00000 0001111246788889999999988887 8999999998876532 22222222 244557
Q ss_pred EEeCEEEEccCCCC
Q 044575 161 EVFDAVVVATGHYS 174 (454)
Q Consensus 161 ~~~d~vViAtG~~~ 174 (454)
+++|.||.|.|.+|
T Consensus 149 ~~a~~vIgAdG~~S 162 (397)
T 3oz2_A 149 VRAKMVIAADGFES 162 (397)
T ss_dssp EEEEEEEECCCTTC
T ss_pred EEEeEEEeCCcccc
Confidence 89999999999544
No 104
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.24 E-value=1.5e-11 Score=122.93 Aligned_cols=147 Identities=24% Similarity=0.303 Sum_probs=89.9
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCcccccccc---------------ceecCCc
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYAS---------------LRLTSPR 76 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~---------------~~~~~~~ 76 (454)
.+||+|||||++|+++|..|++.|.+|+|||+.+.+|+.....+...........+.. +....+.
T Consensus 26 ~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (447)
T 2i0z_A 26 HYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFNNE 105 (447)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSCHH
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcCHH
Confidence 4799999999999999999999999999999998887543322110000000000000 0000000
Q ss_pred ccccc---CCCCCCCCCCCCCCCCC---CHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEE
Q 044575 77 EIMGY---TDFPFVLKKGRDVRRFP---GHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKS 150 (454)
Q Consensus 77 ~~~~~---~~~~~~~~~~~~~~~~~---~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~ 150 (454)
....+ .+.++.... ....|+ ....+.+.|.+.+++.++. ++++++|+++...++. .|.|++
T Consensus 106 ~~~~~~~~~G~~~~~~~--~g~~~p~~~~~~~l~~~L~~~~~~~GV~--i~~~~~V~~i~~~~~~---------v~~V~~ 172 (447)
T 2i0z_A 106 DIITFFENLGVKLKEED--HGRMFPVSNKAQSVVDALLTRLKDLGVK--IRTNTPVETIEYENGQ---------TKAVIL 172 (447)
T ss_dssp HHHHHHHHTTCCEEECG--GGEEEETTCCHHHHHHHHHHHHHHTTCE--EECSCCEEEEEEETTE---------EEEEEE
T ss_pred HHHHHHHhcCCceEEee--CCEEECCCCCHHHHHHHHHHHHHHCCCE--EEeCcEEEEEEecCCc---------EEEEEE
Confidence 00000 011111100 011122 4678888999888888887 9999999999875431 377877
Q ss_pred eecCCCeEEEEEeCEEEEccCCCCCC
Q 044575 151 KEKKADKVVEEVFDAVVVATGHYSYP 176 (454)
Q Consensus 151 ~~~~~~~~~~~~~d~vViAtG~~~~p 176 (454)
.++. ++.+|.||+|||.++.|
T Consensus 173 ~~G~-----~i~Ad~VVlAtGg~s~~ 193 (447)
T 2i0z_A 173 QTGE-----VLETNHVVIAVGGKSVP 193 (447)
T ss_dssp TTCC-----EEECSCEEECCCCSSSG
T ss_pred CCCC-----EEECCEEEECCCCCcCC
Confidence 6543 58999999999976643
No 105
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.24 E-value=1.3e-11 Score=118.87 Aligned_cols=143 Identities=19% Similarity=0.245 Sum_probs=85.5
Q ss_pred CcEEEECcChHHHHHHHHHHH---cCCcEEEEeeCCCCCcccccCCCCCC--C-Cccccccccceec----C--------
Q 044575 13 KNVCVIGAGPSGLVAARELRK---EGHRVVVLEQNHDVGGQWLYDPNTDQ--T-EVHSSVYASLRLT----S-------- 74 (454)
Q Consensus 13 ~~VvIIGaG~aGl~aA~~l~~---~g~~v~vie~~~~~GG~w~~~~~~~~--~-~~~~~~~~~~~~~----~-------- 74 (454)
+||+|||||++|+++|..|++ .|++|+||||++.+||.|........ . .-....|...... .
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~ 81 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRFYDELL 81 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHHHHHHH
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHHHHHHH
Confidence 589999999999999999999 89999999999999998764321000 0 0000000000000 0
Q ss_pred -CccccccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeec
Q 044575 75 -PREIMGYTDFPFVLKKGRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEK 153 (454)
Q Consensus 75 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~ 153 (454)
......+...............|.....+..+++.++++.+.. |+++++|++|+..++ .|+|++.++
T Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~--i~~~~~V~~i~~~~~----------~~~v~~~~g 149 (342)
T 3qj4_A 82 AYGVLRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLKESGAE--VYFRHRVTQINLRDD----------KWEVSKQTG 149 (342)
T ss_dssp HTTSCEECCSCEETCCC--CCEEEECTTCTTHHHHHHHHHHTCE--EESSCCEEEEEECSS----------SEEEEESSS
T ss_pred hCCCeecCchhhcceeccCCccceecCCCHHHHHHHHHHhcCCE--EEeCCEEEEEEEcCC----------EEEEEECCC
Confidence 0000000000000000001112233334556677777777766 999999999998643 799888765
Q ss_pred CCCeEEEEEeCEEEEccCC
Q 044575 154 KADKVVEEVFDAVVVATGH 172 (454)
Q Consensus 154 ~~~~~~~~~~d~vViAtG~ 172 (454)
. ++.||+||+|+..
T Consensus 150 ~-----~~~ad~vV~A~p~ 163 (342)
T 3qj4_A 150 S-----PEQFDLIVLTMPV 163 (342)
T ss_dssp C-----CEEESEEEECSCH
T ss_pred C-----EEEcCEEEECCCH
Confidence 4 5789999999983
No 106
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.19 E-value=9.7e-11 Score=109.62 Aligned_cols=142 Identities=15% Similarity=0.084 Sum_probs=83.4
Q ss_pred CCCcEEEECcChHHHHHHHHHHHc-CCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCC-ccccccCCCCCCC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKE-GHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSP-REIMGYTDFPFVL 88 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~-g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 88 (454)
..+||+|||||++|+++|..|++. |.+|+|||+.+.+||.......... .+....+ ...+.--+.++..
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~---------~~~~~~~~~~~l~~~G~~~~~ 108 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFS---------AMIVRKPAHLFLDEIGVAYDE 108 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCC---------CEEEETTTHHHHHHHTCCCEE
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchH---------HHHcCcHHHHHHHHcCCCccc
Confidence 457999999999999999999997 9999999999988764322221111 0000000 0000001222221
Q ss_pred CCCCCCCCC--CCHHHHHHHHHHHHHH-hCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEee---------cCCC
Q 044575 89 KKGRDVRRF--PGHKELWLYLKDFCQR-FGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKE---------KKAD 156 (454)
Q Consensus 89 ~~~~~~~~~--~~~~~~~~yl~~~~~~-~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~---------~~~~ 156 (454)
....+ ....++...+.+.+.+ .++. ++++++|+++...++. -..|.+.. +..+
T Consensus 109 ----~~~~~~~~~~~~~~~~l~~~~~~~~gv~--i~~~~~V~~i~~~~~~---------v~gv~~~~~~~~~~~~~g~~g 173 (284)
T 1rp0_A 109 ----QDTYVVVKHAALFTSTIMSKLLARPNVK--LFNAVAAEDLIVKGNR---------VGGVVTNWALVAQNHHTQSCM 173 (284)
T ss_dssp ----CSSEEEESCHHHHHHHHHHHHHTSTTEE--EEETEEEEEEEEETTE---------EEEEEEEEHHHHTCTTTSSCC
T ss_pred ----CCCEEEecCHHHHHHHHHHHHHhcCCCE--EEcCcEEEEEEecCCe---------EEEEEEeccccccccCccccC
Confidence 10011 1445666666655544 4666 8899999999865431 22344431 1112
Q ss_pred eEEEEEeCEEEEccCCCCCCCC
Q 044575 157 KVVEEVFDAVVVATGHYSYPRL 178 (454)
Q Consensus 157 ~~~~~~~d~vViAtG~~~~p~~ 178 (454)
...++.+|.||+|+| ..+.+
T Consensus 174 ~~~~i~ad~VV~AtG--~~s~~ 193 (284)
T 1rp0_A 174 DPNVMEAKIVVSSCG--HDGPF 193 (284)
T ss_dssp CCEEEEEEEEEECCC--SSSTT
T ss_pred ceEEEECCEEEECCC--CchHH
Confidence 234789999999999 44444
No 107
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.19 E-value=5.7e-11 Score=121.09 Aligned_cols=182 Identities=18% Similarity=0.134 Sum_probs=107.7
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC-CCCcccccCCCCCCCC-cc-ccccccceecCCc--------ccc
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH-DVGGQWLYDPNTDQTE-VH-SSVYASLRLTSPR--------EIM 79 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~-~~GG~w~~~~~~~~~~-~~-~~~~~~~~~~~~~--------~~~ 79 (454)
..+||+|||||+||++||..|++.|.+|+|||++. .+|+ .+|.++.- .. ......+.. ... ...
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~----~~Cnps~GGia~g~lv~elda-lgg~~~~~~d~~gi 100 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQ----MSCNPAIGGIAKGIVVREIDA-LGGEMGKAIDQTGI 100 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTC----CCSCSEEECTTHHHHHHHHHH-HTCSHHHHHHHHEE
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCC----cCccccccccchHHHHHHHHH-hhhHHHHHhhhccc
Confidence 35899999999999999999999999999999974 4553 12222210 00 000000000 000 000
Q ss_pred ccCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHh-CCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCe
Q 044575 80 GYTDFPFVLKKGRD-VRRFPGHKELWLYLKDFCQRF-GLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADK 157 (454)
Q Consensus 80 ~~~~~~~~~~~~~~-~~~~~~~~~~~~yl~~~~~~~-~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 157 (454)
.|............ ......+..+...+.+.++++ ++. + ++++|+++...++. -+.|.+.++.
T Consensus 101 ~f~~l~~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVe--I-~~~~Vt~L~~e~g~---------V~GV~t~dG~--- 165 (637)
T 2zxi_A 101 QFKMLNTRKGKAVQSPRAQADKKRYREYMKKVCENQENLY--I-KQEEVVDIIVKNNQ---------VVGVRTNLGV--- 165 (637)
T ss_dssp EEEEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEE--E-EESCEEEEEESSSB---------EEEEEETTSC---
T ss_pred ceeecccccCccccchhhhCCHHHHHHHHHHHHHhCCCCE--E-EEeEEEEEEecCCE---------EEEEEECCCc---
Confidence 00000000000000 000124567888888888763 665 5 67899998765432 3446665543
Q ss_pred EEEEEeCEEEEccCCCCCCCCCCCCCcCCccceeEEeecCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEecc
Q 044575 158 VVEEVFDAVVVATGHYSYPRLPSIKGMDKWKRKQMHSHIYRVPEPFRNEVVVVVGNSLSGQDISMELVEVAKEVHLSAK 236 (454)
Q Consensus 158 ~~~~~~d~vViAtG~~~~p~~p~i~G~~~~~~~~~~~~~~~~~~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r 236 (454)
++.+|.||+||| ..++.+.++|...+. .++ +| +.++.++|..|.+.|.+|..+.+
T Consensus 166 --~i~AdaVVLATG--~~s~~~~~~G~~~~~---------------~Gr----~G-~~~A~~la~~L~~lG~~v~~l~t 220 (637)
T 2zxi_A 166 --EYKTKAVVVTTG--TFLNGVIYIGDKMIP---------------GGR----LG-EPRSEGLSDFYRRFDFPLIRFKT 220 (637)
T ss_dssp --EEECSEEEECCT--TCBTCEEEETTEEEE---------------CSB----TT-BCCBCTHHHHHHHTTCCCEEEEE
T ss_pred --EEEeCEEEEccC--CCccCceeccceecC---------------CCC----CC-chhHHHHHHHHHhcCCceEEecC
Confidence 789999999999 666666666654321 122 23 67889999999999988776654
No 108
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.19 E-value=8.5e-11 Score=120.59 Aligned_cols=149 Identities=18% Similarity=0.105 Sum_probs=86.4
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCC--Cc-cccccccceecCCccccc-cCCC---
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQT--EV-HSSVYASLRLTSPREIMG-YTDF--- 84 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~-~~~~--- 84 (454)
.+||+|||||++|+++|..|++.|++|+|||+.+..+....-....+.. .+ ....++.+.......... |.+.
T Consensus 49 ~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 128 (570)
T 3fmw_A 49 TTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGIFTQ 128 (570)
T ss_dssp --CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTBCTT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCcccc
Confidence 5799999999999999999999999999999987653110000000000 00 000000000000000000 1111
Q ss_pred --CCCCCC-CCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEE
Q 044575 85 --PFVLKK-GRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEE 161 (454)
Q Consensus 85 --~~~~~~-~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 161 (454)
.+.... .........+..+.+.|.+.+.+.++. ++++++|++++..++ .++|++...+ + ..++
T Consensus 129 ~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~--i~~~~~v~~l~~~~~----------~v~v~~~~~~-G-~~~~ 194 (570)
T 3fmw_A 129 GLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAE--IPRGHEVTRLRQDAE----------AVEVTVAGPS-G-PYPV 194 (570)
T ss_dssp CCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEE--CCBSCEEEECCBCSS----------CEEEEEEETT-E-EEEE
T ss_pred cccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCE--EEeCCEEEEEEEcCC----------eEEEEEEeCC-C-cEEE
Confidence 111000 001123367888999999999888877 889999999986543 6777775322 1 1478
Q ss_pred EeCEEEEccCCCC
Q 044575 162 VFDAVVVATGHYS 174 (454)
Q Consensus 162 ~~d~vViAtG~~~ 174 (454)
++|+||.|+|.+|
T Consensus 195 ~a~~vV~ADG~~S 207 (570)
T 3fmw_A 195 RARYGVGCDGGRS 207 (570)
T ss_dssp EESEEEECSCSSC
T ss_pred EeCEEEEcCCCCc
Confidence 9999999999654
No 109
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.17 E-value=1.6e-10 Score=117.23 Aligned_cols=147 Identities=22% Similarity=0.262 Sum_probs=88.8
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCC-------CcccccCCCCCCCCccc-----ccccc--ceecCC--
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDV-------GGQWLYDPNTDQTEVHS-----SVYAS--LRLTSP-- 75 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~-------GG~w~~~~~~~~~~~~~-----~~~~~--~~~~~~-- 75 (454)
.+||+|||||++|+++|..|++.|++|+|||+.+.+ ++.|....+.+...... ..+.. +.....
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~~~ 186 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDP 186 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSCCT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEeccc
Confidence 479999999999999999999999999999998776 34565544333210000 00000 000000
Q ss_pred ----cccc-ccCCCCCCCCCCCCCCCCC---CHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEE
Q 044575 76 ----REIM-GYTDFPFVLKKGRDVRRFP---GHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWV 147 (454)
Q Consensus 76 ----~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~ 147 (454)
...+ .+..+..+........... ...++.+.+.+.+++.++. ++++++|+++...++. .+.
T Consensus 187 ~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~--I~~~t~V~~I~~~~~~---------v~g 255 (549)
T 3nlc_A 187 NFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGE--IRFSTRVDDLHMEDGQ---------ITG 255 (549)
T ss_dssp TCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCE--EESSCCEEEEEESSSB---------EEE
T ss_pred cccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCE--EEeCCEEEEEEEeCCE---------EEE
Confidence 0000 0000111100000000111 1356778888888888887 9999999999876532 455
Q ss_pred EEEeecCCCeEEEEEeCEEEEccCCCC
Q 044575 148 VKSKEKKADKVVEEVFDAVVVATGHYS 174 (454)
Q Consensus 148 v~~~~~~~~~~~~~~~d~vViAtG~~~ 174 (454)
|++.++. ++.+|.||+|+|+.+
T Consensus 256 V~l~~G~-----~i~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 256 VTLSNGE-----EIKSRHVVLAVGHSA 277 (549)
T ss_dssp EEETTSC-----EEECSCEEECCCTTC
T ss_pred EEECCCC-----EEECCEEEECCCCCh
Confidence 7776654 789999999999644
No 110
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.16 E-value=2.6e-10 Score=115.37 Aligned_cols=153 Identities=20% Similarity=0.160 Sum_probs=91.4
Q ss_pred hccCCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCC--Cc-cccccccceecCCccccccCCC
Q 044575 8 QCAQSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQT--EV-HSSVYASLRLTSPREIMGYTDF 84 (454)
Q Consensus 8 ~~~~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~ 84 (454)
+++..+||+||||||+|+++|..|++.|++|+|||+.+.++..-.-....+.. .+ ...+++.+....+.....+.+.
T Consensus 7 ~~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~ 86 (500)
T 2qa1_A 7 HHRSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHFGGL 86 (500)
T ss_dssp -CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEEETTE
T ss_pred CccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhccccccccccce
Confidence 34567899999999999999999999999999999987653210000000000 00 0001111110000000111111
Q ss_pred CCCCCC-CC--CCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEE
Q 044575 85 PFVLKK-GR--DVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEE 161 (454)
Q Consensus 85 ~~~~~~-~~--~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 161 (454)
.+.... .. ......++..+.+.|.+.+.+.++. ++++++|++++..++ .++|++.++. + ..++
T Consensus 87 ~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~--v~~~~~v~~i~~~~~----------~v~v~~~~~~-g-~~~~ 152 (500)
T 2qa1_A 87 PIDFGVLEGAWQAAKTVPQSVTETHLEQWATGLGAD--IRRGHEVLSLTDDGA----------GVTVEVRGPE-G-KHTL 152 (500)
T ss_dssp EEEGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCE--EEETCEEEEEEEETT----------EEEEEEEETT-E-EEEE
T ss_pred ecccccCCCCCCceeecCHHHHHHHHHHHHHHCCCE--EECCcEEEEEEEcCC----------eEEEEEEcCC-C-CEEE
Confidence 110000 00 0112245678899999999988877 999999999987653 6778877653 2 3578
Q ss_pred EeCEEEEccCCCC
Q 044575 162 VFDAVVVATGHYS 174 (454)
Q Consensus 162 ~~d~vViAtG~~~ 174 (454)
++|+||.|.|.+|
T Consensus 153 ~a~~vVgADG~~S 165 (500)
T 2qa1_A 153 RAAYLVGCDGGRS 165 (500)
T ss_dssp EESEEEECCCTTC
T ss_pred EeCEEEECCCcch
Confidence 9999999999655
No 111
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.15 E-value=1.4e-10 Score=114.81 Aligned_cols=147 Identities=20% Similarity=0.260 Sum_probs=86.8
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCC----CcccccCCCCCCCCccccccc-----------cceecCCc
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDV----GGQWLYDPNTDQTEVHSSVYA-----------SLRLTSPR 76 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~----GG~w~~~~~~~~~~~~~~~~~-----------~~~~~~~~ 76 (454)
.+||+|||||++|+++|..|++.|.+|+|+|+.+.. |.... ..+... .-....+. ........
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~g~~~~-~~~~~~-l~~~g~~~~~~~~~~~~~~~~~~~~~~ 82 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPRFVIGESLL-PRCMEH-LDEAGFLDAVKAQGFQQKFGAKFVRGK 82 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCC-GGGHHH-HHHTTCHHHHHHTTCEEECEEEEEETT
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccCccc-HhHHHH-HHHcCChHHHHHcCCcccCCcEEEeCC
Confidence 479999999999999999999999999999998632 22111 000000 00000000 00000000
Q ss_pred cccccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCC
Q 044575 77 EIMGYTDFPFVLKKGRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKAD 156 (454)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~ 156 (454)
....+ ++...............+..+...|.+.+.+.++. ++++++|++++..++ .+.+.+...+ +
T Consensus 83 ~~~~~-~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~--i~~~~~v~~i~~~~~----------~~~v~v~~~~-g 148 (421)
T 3nix_A 83 EIADF-NFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVD--VEYEVGVTDIKFFGT----------DSVTTIEDIN-G 148 (421)
T ss_dssp EEEEE-ETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCE--EECSEEEEEEEEETT----------EEEEEEEETT-S
T ss_pred eeEEE-eehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCE--EEcCCEEEEEEEeCC----------EEEEEEEcCC-C
Confidence 00000 01000000001122356788999999999888887 999999999987643 4555554332 3
Q ss_pred eEEEEEeCEEEEccCCCC
Q 044575 157 KVVEEVFDAVVVATGHYS 174 (454)
Q Consensus 157 ~~~~~~~d~vViAtG~~~ 174 (454)
...++.+|.||.|+|.++
T Consensus 149 ~~~~~~a~~vV~A~G~~s 166 (421)
T 3nix_A 149 NKREIEARFIIDASGYGR 166 (421)
T ss_dssp CEEEEEEEEEEECCGGGC
T ss_pred CEEEEEcCEEEECCCCch
Confidence 445789999999999543
No 112
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.15 E-value=5.1e-11 Score=117.52 Aligned_cols=146 Identities=19% Similarity=0.151 Sum_probs=83.9
Q ss_pred cCCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCc---ccccCCCCCC-----CC---c--cccccccceecCC-
Q 044575 10 AQSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGG---QWLYDPNTDQ-----TE---V--HSSVYASLRLTSP- 75 (454)
Q Consensus 10 ~~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG---~w~~~~~~~~-----~~---~--~~~~~~~~~~~~~- 75 (454)
.+.+||+|||||++|+++|..|++.|++|+|||+.+.++. .+...+..-. .. + .............
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~ 100 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGGPLRRMAYRDFR 100 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSCCCCEEEEEETT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcCCCcceEEEECC
Confidence 4568999999999999999999999999999999876531 1110000000 00 0 0000000000000
Q ss_pred --ccccccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeec
Q 044575 76 --REIMGYTDFPFVLKKGRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEK 153 (454)
Q Consensus 76 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~ 153 (454)
.....+....+... .........+..+.+.|.+.+.+ . .++++++|++++..++ .++|++.++
T Consensus 101 ~g~~~~~~~~~~~~~~-~~~~~~~i~r~~l~~~L~~~~~~--~--~i~~~~~v~~i~~~~~----------~v~v~~~~g 165 (407)
T 3rp8_A 101 SGENMTQFSLAPLIER-TGSRPCPVSRAELQREMLDYWGR--D--SVQFGKRVTRCEEDAD----------GVTVWFTDG 165 (407)
T ss_dssp TCCEEEEEECHHHHHH-HSSCCEEEEHHHHHHHHHHHHCG--G--GEEESCCEEEEEEETT----------EEEEEETTS
T ss_pred CCCEeEEecchhhhhh-cCCceEEEEHHHHHHHHHHhCCc--C--EEEECCEEEEEEecCC----------cEEEEEcCC
Confidence 00000000000000 00111224567888888887765 3 3899999999987653 688888766
Q ss_pred CCCeEEEEEeCEEEEccCCCCC
Q 044575 154 KADKVVEEVFDAVVVATGHYSY 175 (454)
Q Consensus 154 ~~~~~~~~~~d~vViAtG~~~~ 175 (454)
. ++.+|.||.|+|.+|.
T Consensus 166 ~-----~~~a~~vV~AdG~~S~ 182 (407)
T 3rp8_A 166 S-----SASGDLLIAADGSHSA 182 (407)
T ss_dssp C-----EEEESEEEECCCTTCS
T ss_pred C-----EEeeCEEEECCCcChH
Confidence 4 7899999999996543
No 113
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.14 E-value=4.4e-10 Score=107.56 Aligned_cols=41 Identities=32% Similarity=0.598 Sum_probs=38.4
Q ss_pred CcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCccccc
Q 044575 13 KNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLY 53 (454)
Q Consensus 13 ~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~ 53 (454)
+||+|||||++|+++|..|++.|.+|+|||+++.+||.+..
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~ 43 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSS 43 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCccccee
Confidence 68999999999999999999999999999999999987654
No 114
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.14 E-value=6.3e-11 Score=119.76 Aligned_cols=140 Identities=21% Similarity=0.246 Sum_probs=87.0
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCcccc-ccCCCCCCCC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIM-GYTDFPFVLK 89 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 89 (454)
..+||+|||||++|+++|..|++.|.+|+|||+++.+|+..... ..+ .....+. .. ... ....+..
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~~~~~-~~~------~~~~~l~-~~--g~~~~~~~~~~--- 157 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRHNVLH-LWP------FTIHDLR-AL--GAKKFYGRFCT--- 157 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCCCEEE-CCH------HHHHHHH-TT--THHHHCTTTTC---
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCCCccc-CCh------hHHHHHH-Hc--CCccccccccc---
Confidence 46899999999999999999999999999999998876532110 000 0000000 00 000 0000100
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEc
Q 044575 90 KGRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVA 169 (454)
Q Consensus 90 ~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViA 169 (454)
......+..++.+++.+.+++.++. ++++++|+++...+.. .. .|.|++.+..++...++.+|+||+|
T Consensus 158 ---~~~~~~~~~~l~~~L~~~~~~~gv~--v~~~~~v~~i~~~~~~------~~-~~~v~~~~~~~g~~~~i~ad~VV~A 225 (497)
T 2bry_A 158 ---GTLDHISIRQLQLLLLKVALLLGVE--IHWGVKFTGLQPPPRK------GS-GWRAQLQPNPPAQLASYEFDVLISA 225 (497)
T ss_dssp ---TTCCEEEHHHHHHHHHHHHHHTTCE--EEESCEEEEEECCCST------TC-CBEEEEESCCCHHHHTCCBSEEEEC
T ss_pred ---cccccCCHHHHHHHHHHHHHhCCCE--EEeCCEEEEEEEecCC------CC-EEEEEEEECCCCCEEEEEcCEEEEC
Confidence 0111234578889999999888887 9999999999864211 01 6788774220111125789999999
Q ss_pred cCCCCC
Q 044575 170 TGHYSY 175 (454)
Q Consensus 170 tG~~~~ 175 (454)
+|..+.
T Consensus 226 ~G~~S~ 231 (497)
T 2bry_A 226 AGGKFV 231 (497)
T ss_dssp CCTTCC
T ss_pred CCCCcc
Confidence 995443
No 115
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.13 E-value=1.6e-10 Score=116.79 Aligned_cols=151 Identities=21% Similarity=0.137 Sum_probs=90.6
Q ss_pred cCCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCC--Cc-cccccccceecCCccccccCCCCC
Q 044575 10 AQSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQT--EV-HSSVYASLRLTSPREIMGYTDFPF 86 (454)
Q Consensus 10 ~~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~ 86 (454)
+..+||+||||||+|+++|..|++.|.+|+|||+.+.++..-.-....+.. .+ ...+++.+....+.....+.+..+
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~ 89 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGGRPV 89 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETTEEE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceecceec
Confidence 456899999999999999999999999999999987653210000000000 00 000011110000000011111111
Q ss_pred CCC--C-CCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEe
Q 044575 87 VLK--K-GRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVF 163 (454)
Q Consensus 87 ~~~--~-~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 163 (454)
... . ........++..+.+.|.+.+.+.++. ++++++|++++..++ .++|++.++. + ..++++
T Consensus 90 ~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~--v~~~~~v~~i~~~~~----------~v~v~~~~~~-g-~~~~~a 155 (499)
T 2qa2_A 90 DFGVLEGAHYGVKAVPQSTTESVLEEWALGRGAE--LLRGHTVRALTDEGD----------HVVVEVEGPD-G-PRSLTT 155 (499)
T ss_dssp EGGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCE--EEESCEEEEEEECSS----------CEEEEEECSS-C-EEEEEE
T ss_pred ccccCCCCCCceEecCHHHHHHHHHHHHHhCCCE--EEcCCEEEEEEEeCC----------EEEEEEEcCC-C-cEEEEe
Confidence 000 0 000112245788999999999888877 999999999987653 6778877654 3 357899
Q ss_pred CEEEEccCCCC
Q 044575 164 DAVVVATGHYS 174 (454)
Q Consensus 164 d~vViAtG~~~ 174 (454)
|+||.|.|.+|
T Consensus 156 ~~vVgADG~~S 166 (499)
T 2qa2_A 156 RYVVGCDGGRS 166 (499)
T ss_dssp EEEEECCCTTC
T ss_pred CEEEEccCccc
Confidence 99999999655
No 116
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.13 E-value=2e-10 Score=112.10 Aligned_cols=138 Identities=17% Similarity=0.094 Sum_probs=83.9
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcc---cccCC--------C-CCCCCc-cccccccceecCCcc
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQ---WLYDP--------N-TDQTEV-HSSVYASLRLTSPRE 77 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~---w~~~~--------~-~~~~~~-~~~~~~~~~~~~~~~ 77 (454)
..+||+|||||++|+++|..|++.|.+|+|||+.+.+++. ....+ . ...... ............+..
T Consensus 10 ~~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~ 89 (379)
T 3alj_A 10 KTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMHNK 89 (379)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEETTE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeCCc
Confidence 3589999999999999999999999999999998776431 00000 0 000000 000000000000000
Q ss_pred ccccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCe
Q 044575 78 IMGYTDFPFVLKKGRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADK 157 (454)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 157 (454)
.+..++.+. ......++.++.+++.+.+.+.++. ++++++|++++. + . .|++.++.
T Consensus 90 --~~~~~~~~~----~~~~~~~r~~l~~~L~~~~~~~gv~--i~~~~~v~~i~~---~---------~-~v~~~~g~--- 145 (379)
T 3alj_A 90 --SVSKETFNG----LPWRIMTRSHLHDALVNRARALGVD--ISVNSEAVAADP---V---------G-RLTLQTGE--- 145 (379)
T ss_dssp --EEEEECGGG----CCEEEEEHHHHHHHHHHHHHHTTCE--EESSCCEEEEET---T---------T-EEEETTSC---
T ss_pred --eeeeccCCC----CceEEECHHHHHHHHHHHHHhcCCE--EEeCCEEEEEEe---C---------C-EEEECCCC---
Confidence 000001000 1112346688999999999888877 999999999975 1 6 67776543
Q ss_pred EEEEEeCEEEEccCCCC
Q 044575 158 VVEEVFDAVVVATGHYS 174 (454)
Q Consensus 158 ~~~~~~d~vViAtG~~~ 174 (454)
++.+|.||.|+|.++
T Consensus 146 --~~~ad~vV~AdG~~s 160 (379)
T 3alj_A 146 --VLEADLIVGADGVGS 160 (379)
T ss_dssp --EEECSEEEECCCTTC
T ss_pred --EEEcCEEEECCCccH
Confidence 689999999999543
No 117
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.12 E-value=7.5e-11 Score=115.92 Aligned_cols=142 Identities=19% Similarity=0.143 Sum_probs=81.0
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCC----CcccccCCCCCCCCccccccccceecCCccccccC----C
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDV----GGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYT----D 83 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~----GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 83 (454)
.+||+|||||++|+++|..|++.|++|+|||+.+.. |+.+...+..-..+-...... .....+...+.+. +
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~-~~~~~~~~~~~~~~~~~g 83 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVEL-DSISVPSSSMEYVDALTG 83 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCG-GGTCBCCCEEEEEETTTC
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCcc-ccccccccceEEEecCCC
Confidence 479999999999999999999999999999998753 211111100000000000000 0000000000000 0
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEe
Q 044575 84 FPFVLKKGRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVF 163 (454)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 163 (454)
...... .....+..+..+.+++.+.+ .++. ++++++|++++..++ .++|++.++. ++.+
T Consensus 84 ~~~~~~--~~~~~~~~~~~l~~~L~~~~--~~~~--i~~~~~v~~i~~~~~----------~v~v~~~~g~-----~~~a 142 (397)
T 2vou_A 84 ERVGSV--PADWRFTSYDSIYGGLYELF--GPER--YHTSKCLVGLSQDSE----------TVQMRFSDGT-----KAEA 142 (397)
T ss_dssp CEEEEE--ECCCCEEEHHHHHHHHHHHH--CSTT--EETTCCEEEEEECSS----------CEEEEETTSC-----EEEE
T ss_pred Cccccc--cCcccccCHHHHHHHHHHhC--CCcE--EEcCCEEEEEEecCC----------EEEEEECCCC-----EEEC
Confidence 000000 00011234567777776654 2555 899999999987643 6888887654 6899
Q ss_pred CEEEEccCCCCC
Q 044575 164 DAVVVATGHYSY 175 (454)
Q Consensus 164 d~vViAtG~~~~ 175 (454)
|.||.|+|.+|.
T Consensus 143 d~vV~AdG~~S~ 154 (397)
T 2vou_A 143 NWVIGADGGASV 154 (397)
T ss_dssp SEEEECCCTTCH
T ss_pred CEEEECCCcchh
Confidence 999999996553
No 118
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.11 E-value=2.1e-10 Score=111.14 Aligned_cols=62 Identities=13% Similarity=0.086 Sum_probs=48.7
Q ss_pred CHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccCCCC
Q 044575 99 GHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATGHYS 174 (454)
Q Consensus 99 ~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG~~~ 174 (454)
....+...+.+.+++.++. ++++++|+++...+++ .|.|.+.+++ ..++.+|+||+|+|.++
T Consensus 148 ~~~~~~~~l~~~~~~~Gv~--i~~~~~v~~i~~~~~~---------~~~v~~~~g~---~~~~~a~~VV~A~G~~s 209 (369)
T 3dme_A 148 DSHALMLAYQGDAESDGAQ--LVFHTPLIAGRVRPEG---------GFELDFGGAE---PMTLSCRVLINAAGLHA 209 (369)
T ss_dssp CHHHHHHHHHHHHHHTTCE--EECSCCEEEEEECTTS---------SEEEEECTTS---CEEEEEEEEEECCGGGH
T ss_pred CHHHHHHHHHHHHHHCCCE--EECCCEEEEEEEcCCc---------eEEEEECCCc---eeEEEeCEEEECCCcch
Confidence 4567888888888888887 8999999999986543 5888776542 23789999999999654
No 119
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.11 E-value=2.4e-10 Score=117.54 Aligned_cols=151 Identities=20% Similarity=0.159 Sum_probs=88.7
Q ss_pred ccCCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCC--Ccc-ccccccc-----------e--e
Q 044575 9 CAQSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQT--EVH-SSVYASL-----------R--L 72 (454)
Q Consensus 9 ~~~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~--~~~-~~~~~~~-----------~--~ 72 (454)
|+..+||+|||||++|+++|..|++.|++|+|||+.+..+... -....+.. .+. ...+..+ . .
T Consensus 20 ~M~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~~~-G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~ 98 (591)
T 3i3l_A 20 HMTRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRYRV-GESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFLW 98 (591)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCCCC-CCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEEC
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCCce-eeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEEe
Confidence 3456899999999999999999999999999999985432110 00000000 000 0000000 0 0
Q ss_pred cCCcc--ccccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEE
Q 044575 73 TSPRE--IMGYTDFPFVLKKGRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKS 150 (454)
Q Consensus 73 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~ 150 (454)
..... ...+....... ..........+..+..+|.+.+.+.++. ++++++|++|...++. .+.|++
T Consensus 99 ~~~~~~~~~~~~~~~~~~-~~~~~~~~v~r~~l~~~L~~~a~~~Gv~--i~~g~~V~~v~~~~g~---------~~~V~~ 166 (591)
T 3i3l_A 99 GQDQAPWTFSFAAPKVAP-WVFDHAVQVKREEFDKLLLDEARSRGIT--VHEETPVTDVDLSDPD---------RVVLTV 166 (591)
T ss_dssp SSSCCCEEEECCCC--CT-TCCSCEEECCHHHHHHHHHHHHHHTTCE--EETTCCEEEEECCSTT---------CEEEEE
T ss_pred cCCCccceeecccccccc-cccCeeEEEcHHHHHHHHHHHHHhCCCE--EEeCCEEEEEEEcCCC---------EEEEEE
Confidence 00000 00010000000 0001112246788999999999988887 8999999999875333 688888
Q ss_pred eecCCCeEEEEEeCEEEEccCCCC
Q 044575 151 KEKKADKVVEEVFDAVVVATGHYS 174 (454)
Q Consensus 151 ~~~~~~~~~~~~~d~vViAtG~~~ 174 (454)
.++ +...++.+|.||.|+|..+
T Consensus 167 ~~~--G~~~~i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 167 RRG--GESVTVESDFVIDAGGSGG 188 (591)
T ss_dssp EET--TEEEEEEESEEEECCGGGC
T ss_pred ecC--CceEEEEcCEEEECCCCcc
Confidence 742 3345789999999999543
No 120
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.11 E-value=1.1e-10 Score=114.67 Aligned_cols=144 Identities=22% Similarity=0.311 Sum_probs=84.1
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCC-----CcccccCCCCCCCCc-cccccccce---------ecCC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDV-----GGQWLYDPNTDQTEV-HSSVYASLR---------LTSP 75 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~-----GG~w~~~~~~~~~~~-~~~~~~~~~---------~~~~ 75 (454)
..+||+|||||++|+++|..|++.|++|+|||+.+.+ |+.|...+......+ ...+++.+. ....
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~ 104 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGVNIADE 104 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCEEEECS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccceEEECC
Confidence 4579999999999999999999999999999998754 444433211000000 000000000 0000
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCC
Q 044575 76 REIMGYTDFPFVLKKGRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKA 155 (454)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~ 155 (454)
.... +....++.. +........+.++.++|.+.+.. . .++++++|++++..++ .|+|++.++.
T Consensus 105 ~g~~-~~~~~~~~~-~~~~~~~i~r~~l~~~L~~~~~~--~--~i~~~~~v~~i~~~~~----------~v~v~~~~g~- 167 (398)
T 2xdo_A 105 KGNI-LSTKNVKPE-NRFDNPEINRNDLRAILLNSLEN--D--TVIWDRKLVMLEPGKK----------KWTLTFENKP- 167 (398)
T ss_dssp SSEE-EEECCCGGG-TTSSCCEECHHHHHHHHHHTSCT--T--SEEESCCEEEEEECSS----------SEEEEETTSC-
T ss_pred CCCc-hhhcccccc-CCCCCceECHHHHHHHHHhhcCC--C--EEEECCEEEEEEECCC----------EEEEEECCCc-
Confidence 0000 000000100 00111224567777777665432 2 4899999999987643 6888887654
Q ss_pred CeEEEEEeCEEEEccCCCCC
Q 044575 156 DKVVEEVFDAVVVATGHYSY 175 (454)
Q Consensus 156 ~~~~~~~~d~vViAtG~~~~ 175 (454)
++.+|.||.|+|.++.
T Consensus 168 ----~~~ad~vV~AdG~~S~ 183 (398)
T 2xdo_A 168 ----SETADLVILANGGMSK 183 (398)
T ss_dssp ----CEEESEEEECSCTTCS
T ss_pred ----EEecCEEEECCCcchh
Confidence 6899999999996554
No 121
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.11 E-value=2.4e-10 Score=112.82 Aligned_cols=151 Identities=22% Similarity=0.202 Sum_probs=85.6
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCc-EEEEeeCCCCCccc---ccCCCCCCCCccccccccceec-CCccccccCC---
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHR-VVVLEQNHDVGGQW---LYDPNTDQTEVHSSVYASLRLT-SPREIMGYTD--- 83 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~-v~vie~~~~~GG~w---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--- 83 (454)
.+||+|||||++|+++|..|++.|.+ |+|||+.+.++... ...+..-..+....+++.+... .+...+.+.+
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~l~~~~~~~~~~~~~~~~g 83 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATAIPTHELRYIDQSG 83 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHHHHHHSEEECEEEEECTTS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHHHHhhCCCcceEEEEcCCC
Confidence 47999999999999999999999999 99999987654221 1000000000000000000000 0000000000
Q ss_pred -----CCCCCCCCCCC-CCCCCHHHHHHHHHHHHHH-hC-CCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCC
Q 044575 84 -----FPFVLKKGRDV-RRFPGHKELWLYLKDFCQR-FG-LREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKA 155 (454)
Q Consensus 84 -----~~~~~~~~~~~-~~~~~~~~~~~yl~~~~~~-~~-~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~ 155 (454)
.+.....+... .....+.++.++|.+.+.+ .+ +. ++++++|++++. ++ .++|++.+..+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~--v~~~~~v~~i~~-~~----------~v~v~~~~~~~ 150 (410)
T 3c96_A 84 ATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQA--VRTGLGVERIEE-RD----------GRVLIGARDGH 150 (410)
T ss_dssp CEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTS--EEESEEEEEEEE-ET----------TEEEEEEEETT
T ss_pred CEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcE--EEECCEEEEEec-CC----------ccEEEEecCCC
Confidence 00000000000 1224567888898888876 45 35 899999999987 33 67788776211
Q ss_pred CeEEEEEeCEEEEccCCCCC
Q 044575 156 DKVVEEVFDAVVVATGHYSY 175 (454)
Q Consensus 156 ~~~~~~~~d~vViAtG~~~~ 175 (454)
+...++.+|.||.|+|.+|.
T Consensus 151 g~~~~~~ad~vV~AdG~~S~ 170 (410)
T 3c96_A 151 GKPQALGADVLVGADGIHSA 170 (410)
T ss_dssp SCEEEEEESEEEECCCTTCH
T ss_pred CCceEEecCEEEECCCccch
Confidence 22347899999999996653
No 122
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.09 E-value=2.1e-10 Score=112.78 Aligned_cols=143 Identities=22% Similarity=0.168 Sum_probs=84.6
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCC---cccccCCCCCCCCccccccc----------cceecCCc--
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVG---GQWLYDPNTDQTEVHSSVYA----------SLRLTSPR-- 76 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~G---G~w~~~~~~~~~~~~~~~~~----------~~~~~~~~-- 76 (454)
.+||+|||||++|+++|..|++.|.+|+|||+.+.+. ......+......-....++ .+......
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~g~ 85 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHDGE 85 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEEETTE
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEeCCCC
Confidence 3799999999999999999999999999999987541 10100000000000000000 00000000
Q ss_pred cccccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-CCCccEEeCeEEEEEEEcCCCccccCCcCCcE--EEEEeec
Q 044575 77 EIMGYTDFPFVLKKGRDVRRFPGHKELWLYLKDFCQRF-GLREMIRFNTRVEYVGMLDCGELIIGNDLIKW--VVKSKEK 153 (454)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~-~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~--~v~~~~~ 153 (454)
.... ++..............+.++.+.|.+.+++. ++. ++++++|++++..++ .+ .|++.++
T Consensus 86 ~~~~---~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~--i~~~~~v~~i~~~~~----------~v~g~v~~~~g 150 (399)
T 2x3n_A 86 LLRY---FNYSSVDARGYFILMPCESLRRLVLEKIDGEATVE--MLFETRIEAVQRDER----------HAIDQVRLNDG 150 (399)
T ss_dssp EEEE---EETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEE--EECSCCEEEEEECTT----------SCEEEEEETTS
T ss_pred EEEe---cchHHhcccCccccccHHHHHHHHHHHhhhcCCcE--EEcCCEEEEEEEcCC----------ceEEEEEECCC
Confidence 0000 1100000001112356788889998888776 666 889999999987643 56 7777654
Q ss_pred CCCeEEEEEeCEEEEccCCCC
Q 044575 154 KADKVVEEVFDAVVVATGHYS 174 (454)
Q Consensus 154 ~~~~~~~~~~d~vViAtG~~~ 174 (454)
. ++.+|.||.|+|.++
T Consensus 151 ~-----~~~ad~vV~AdG~~s 166 (399)
T 2x3n_A 151 R-----VLRPRVVVGADGIAS 166 (399)
T ss_dssp C-----EEEEEEEEECCCTTC
T ss_pred C-----EEECCEEEECCCCCh
Confidence 3 789999999999654
No 123
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.09 E-value=4.6e-10 Score=114.73 Aligned_cols=152 Identities=20% Similarity=0.133 Sum_probs=89.1
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCC--------C----cc-cccccc--------c
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQT--------E----VH-SSVYAS--------L 70 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~--------~----~~-~~~~~~--------~ 70 (454)
.+||+|||||++|+++|..|++.|.+|+|||+.+.++..-.-....+.. . .. ...... .
T Consensus 5 ~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 84 (535)
T 3ihg_A 5 EVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRAAGQNPRTMELLRIGGVADEVVRADDIRGTQGDFVIRLA 84 (535)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCCSCCBCHHHHHHHHHTTCHHHHHHSCCSSCTTSCCEEEEE
T ss_pred cCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCccceECHHHHHHHHHcCCHHHHHhhCCCcccccceeeeEE
Confidence 4799999999999999999999999999999987653110000000000 0 00 000000 0
Q ss_pred eecCCcccccc-CCCCC-----CCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCC
Q 044575 71 RLTSPREIMGY-TDFPF-----VLKKGRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLI 144 (454)
Q Consensus 71 ~~~~~~~~~~~-~~~~~-----~~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~ 144 (454)
.......+..+ ..++. .. .........++..+..+|.+.+.+.++. ++++++|++++..+++. ..
T Consensus 85 ~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~l~~~L~~~a~~~gv~--i~~~~~v~~i~~~~~~~-----~~- 155 (535)
T 3ihg_A 85 ESVRGEILRTVSESFDDMVAATEP-CTPAGWAMLSQDKLEPILLAQARKHGGA--IRFGTRLLSFRQHDDDA-----GA- 155 (535)
T ss_dssp SSSSSCEEEEEESCHHHHHHTTGG-GCSCCCBCCCHHHHHHHHHHHHHHTTCE--EESSCEEEEEEEECGGG-----CS-
T ss_pred eccCCceeeecccccccccccccc-CCCCcccccCHHHHHHHHHHHHHhCCCE--EEeCCEEEEEEECCCCc-----cc-
Confidence 00000000000 00000 00 0001123457789999999999988877 99999999998765410 00
Q ss_pred cEEEEEeecCCCeEEEEEeCEEEEccCCCC
Q 044575 145 KWVVKSKEKKADKVVEEVFDAVVVATGHYS 174 (454)
Q Consensus 145 ~~~v~~~~~~~~~~~~~~~d~vViAtG~~~ 174 (454)
.+++++.+++ + ..++++|+||.|+|.+|
T Consensus 156 ~v~v~~~~~~-~-~~~i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 156 GVTARLAGPD-G-EYDLRAGYLVGADGNRS 183 (535)
T ss_dssp EEEEEEEETT-E-EEEEEEEEEEECCCTTC
T ss_pred cEEEEEEcCC-C-eEEEEeCEEEECCCCcc
Confidence 4667776653 1 45789999999999654
No 124
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.08 E-value=3.5e-10 Score=112.62 Aligned_cols=60 Identities=13% Similarity=0.056 Sum_probs=47.5
Q ss_pred CHHHHHHHHHHHHHHhCCCccEEeCe---EEEEEEEcCCCccccCCcCCcEE-EEEeecCCCeEEEEEeCEEEEccCCCC
Q 044575 99 GHKELWLYLKDFCQRFGLREMIRFNT---RVEYVGMLDCGELIIGNDLIKWV-VKSKEKKADKVVEEVFDAVVVATGHYS 174 (454)
Q Consensus 99 ~~~~~~~yl~~~~~~~~~~~~i~~~~---~V~~v~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~d~vViAtG~~~ 174 (454)
....+...+.+.+++.++. +++++ +|++|...++ +++ |++.++. ++.+|+||+|+|.++
T Consensus 159 ~~~~~~~~L~~~a~~~Gv~--i~~~t~~~~V~~i~~~~~----------~v~gV~t~~G~-----~i~Ad~VV~AtG~~s 221 (438)
T 3dje_A 159 HARNALVAAAREAQRMGVK--FVTGTPQGRVVTLIFENN----------DVKGAVTADGK-----IWRAERTFLCAGASA 221 (438)
T ss_dssp CHHHHHHHHHHHHHHTTCE--EEESTTTTCEEEEEEETT----------EEEEEEETTTE-----EEECSEEEECCGGGG
T ss_pred cHHHHHHHHHHHHHhcCCE--EEeCCcCceEEEEEecCC----------eEEEEEECCCC-----EEECCEEEECCCCCh
Confidence 3467888888888888987 99999 9999987543 666 7776553 689999999999765
Q ss_pred C
Q 044575 175 Y 175 (454)
Q Consensus 175 ~ 175 (454)
.
T Consensus 222 ~ 222 (438)
T 3dje_A 222 G 222 (438)
T ss_dssp G
T ss_pred h
Confidence 4
No 125
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.06 E-value=2.5e-10 Score=116.83 Aligned_cols=183 Identities=14% Similarity=0.146 Sum_probs=102.5
Q ss_pred cCCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC-CCCcccccCCCCCCCC-cc-ccccccceec-------CCcccc
Q 044575 10 AQSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH-DVGGQWLYDPNTDQTE-VH-SSVYASLRLT-------SPREIM 79 (454)
Q Consensus 10 ~~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~-~~GG~w~~~~~~~~~~-~~-~~~~~~~~~~-------~~~~~~ 79 (454)
...+||+|||||+||++||..|++.|.+|+|||++. .+|+.+ |.++.- .. ......+... ......
T Consensus 19 ~~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~----c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi 94 (641)
T 3cp8_A 19 SHMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMS----CNPAIGGVAKGQITREIDALGGEMGKAIDATGI 94 (641)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCS----SCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEE
T ss_pred cCcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCc----cccchhhhhHHHHHHHHHhcccHHHHHHHhcCC
Confidence 346899999999999999999999999999999975 455532 222110 00 0000000000 000000
Q ss_pred ccCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHh-CCCccEEeCeEEEEEEEcCCCccccCCcCCcEE-EEEeecCCC
Q 044575 80 GYTDFPFVLKKGRD-VRRFPGHKELWLYLKDFCQRF-GLREMIRFNTRVEYVGMLDCGELIIGNDLIKWV-VKSKEKKAD 156 (454)
Q Consensus 80 ~~~~~~~~~~~~~~-~~~~~~~~~~~~yl~~~~~~~-~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~-v~~~~~~~~ 156 (454)
.|............ ......+..+...+.+.++++ ++. + ++.+|+.+...++ ... |.+.++.
T Consensus 95 ~f~~l~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~--I-~~~~V~~L~~d~g----------~V~GV~t~~G~-- 159 (641)
T 3cp8_A 95 QFRMLNRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNID--L-LQDTVIGVSANSG----------KFSSVTVRSGR-- 159 (641)
T ss_dssp EEEEECSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEE--E-EECCEEEEEEETT----------EEEEEEETTSC--
T ss_pred chhhcccccCccccchhhhcCHHHHHHHHHHHHHhCCCCE--E-EeeEEEEEEecCC----------EEEEEEECCCc--
Confidence 00000000000000 001234567788888888764 665 4 5668888876532 333 6555443
Q ss_pred eEEEEEeCEEEEccCCCCCCCCCCCCCcCCccceeEEeecCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEec
Q 044575 157 KVVEEVFDAVVVATGHYSYPRLPSIKGMDKWKRKQMHSHIYRVPEPFRNEVVVVVGNSLSGQDISMELVEVAKEVHLSA 235 (454)
Q Consensus 157 ~~~~~~~d~vViAtG~~~~p~~p~i~G~~~~~~~~~~~~~~~~~~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~ 235 (454)
++.+|.||+||| ..++.+.++|...+. +.+++ |+.+++++|..|.+.|.+|..+.
T Consensus 160 ---~i~Ad~VVLATG--~~s~~~i~~G~~~~~----------------~g~~v---G~~~a~~la~~L~~~G~kv~~l~ 214 (641)
T 3cp8_A 160 ---AIQAKAAILACG--TFLNGLIHIGMDHFP----------------GGRST---AEPPVEGLTESLASLGFSFGRLK 214 (641)
T ss_dssp ---EEEEEEEEECCT--TCBTCEEEETTEEEE----------------CSSST---TSCCBCSHHHHHHHTTCCEEEEE
T ss_pred ---EEEeCEEEECcC--CCCCccceeeeeeec----------------ccccc---CCchhhhhHHHHHhCCceEEeec
Confidence 789999999999 554433333332211 01221 46788999999999998887553
No 126
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.05 E-value=7.6e-10 Score=112.44 Aligned_cols=150 Identities=18% Similarity=0.144 Sum_probs=85.5
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCC----CCcccccCCCCCCCCccccccccceec-CCc-c--ccccC-
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHD----VGGQWLYDPNTDQTEVHSSVYASLRLT-SPR-E--IMGYT- 82 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~----~GG~w~~~~~~~~~~~~~~~~~~~~~~-~~~-~--~~~~~- 82 (454)
.+||+|||||++|+++|..|++.|++|+|||+.+. .|..+..... ....-...+++.+... .+. . ...+.
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~~~~-~~~l~~lgl~~~~~~~~~~~~~~~~~~~~~ 85 (512)
T 3e1t_A 7 VFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQIGESLLPATV-HGICAMLGLTDEMKRAGFPIKRGGTFRWGK 85 (512)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCHHHH-TTHHHHTTCHHHHHTTTCCEECEEEEECSS
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCCCCcccCcchH-HHHHHHhCcHHHHHHcCCccccCceEEecC
Confidence 47999999999999999999999999999999862 2222110000 0000000000000000 000 0 00000
Q ss_pred -------CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCC
Q 044575 83 -------DFPFVLKKGRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKA 155 (454)
Q Consensus 83 -------~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~ 155 (454)
.+...............+..+..+|.+.+.+.++. ++++++|++|...++. ...|++...+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~--i~~~~~V~~v~~~~~~---------v~gv~~~~~d- 153 (512)
T 3e1t_A 86 EPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVD--VRERHEVIDVLFEGER---------AVGVRYRNTE- 153 (512)
T ss_dssp CSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCE--EESSCEEEEEEEETTE---------EEEEEEECSS-
T ss_pred CccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCE--EEcCCEEEEEEEECCE---------EEEEEEEeCC-
Confidence 00000000001112256788999999999988877 9999999999875431 2224554322
Q ss_pred CeEEEEEeCEEEEccCCCC
Q 044575 156 DKVVEEVFDAVVVATGHYS 174 (454)
Q Consensus 156 ~~~~~~~~d~vViAtG~~~ 174 (454)
+...++.+|.||.|+|.++
T Consensus 154 G~~~~i~ad~VI~AdG~~S 172 (512)
T 3e1t_A 154 GVELMAHARFIVDASGNRT 172 (512)
T ss_dssp SCEEEEEEEEEEECCCTTC
T ss_pred CCEEEEEcCEEEECCCcch
Confidence 3345789999999999544
No 127
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.05 E-value=2.3e-09 Score=110.20 Aligned_cols=154 Identities=19% Similarity=0.179 Sum_probs=90.1
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCC----CC------Cccc--cccccce-----ec
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTD----QT------EVHS--SVYASLR-----LT 73 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~----~~------~~~~--~~~~~~~-----~~ 73 (454)
..+||+|||||++|++||..|++.|.+|+||||.+.+||........- +. ...+ ..+..+. ..
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~~~ 199 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQQN 199 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCC
Confidence 357999999999999999999999999999999998877543321100 00 0000 0000000 00
Q ss_pred CCc-----------cc--cccCCCCCCC---CCCCCC-------CCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEE
Q 044575 74 SPR-----------EI--MGYTDFPFVL---KKGRDV-------RRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVG 130 (454)
Q Consensus 74 ~~~-----------~~--~~~~~~~~~~---~~~~~~-------~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~ 130 (454)
.+. .+ +.-.+.++.. ..+... ........+.+.|.+.+++.++. ++++++|+++.
T Consensus 200 ~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~~gv~--i~~~~~v~~l~ 277 (566)
T 1qo8_A 200 DIKLVTILAEQSADGVQWLESLGANLDDLKRSGGARVDRTHRPHGGKSSGPEIIDTLRKAAKEQGID--TRLNSRVVKLV 277 (566)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEECSSSSCHHHHHHHHHHHHHHHTTCC--EECSEEEEEEE
T ss_pred CHHHHHHHHhccHHHHHHHHhcCCccccccccCCCCCCceeecCCCCCCHHHHHHHHHHHHHhcCCE--EEeCCEEEEEE
Confidence 000 00 0000111110 000000 01134678889999999998988 99999999998
Q ss_pred EcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccCCCCC
Q 044575 131 MLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATGHYSY 175 (454)
Q Consensus 131 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG~~~~ 175 (454)
..+++. -+-|++.+. ++...++.+|.||+|||.++.
T Consensus 278 ~~~~g~--------v~Gv~~~~~-~g~~~~i~A~~VVlAtGg~s~ 313 (566)
T 1qo8_A 278 VNDDHS--------VVGAVVHGK-HTGYYMIGAKSVVLATGGYGM 313 (566)
T ss_dssp ECTTSB--------EEEEEEEET-TTEEEEEEEEEEEECCCCCTT
T ss_pred ECCCCc--------EEEEEEEeC-CCcEEEEEcCEEEEecCCccc
Confidence 764120 233555532 234457899999999996653
No 128
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.05 E-value=1.8e-09 Score=111.19 Aligned_cols=152 Identities=22% Similarity=0.203 Sum_probs=90.4
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCC---CC-------Cccc--cccccc-----eecC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTD---QT-------EVHS--SVYASL-----RLTS 74 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~---~~-------~~~~--~~~~~~-----~~~~ 74 (454)
.+||+|||||++|++||..|++.|.+|+||||.+.+||........- .. ...+ ..+..+ ....
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~~ 205 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMFEDTMKGGQNIND 205 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHhCCCCCHHHHHHHHHHhcCCCCC
Confidence 57999999999999999999999999999999998887654432110 00 0000 000000 0000
Q ss_pred Ccc-------------ccccCCCCCCC---CCCCCCC-------CCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEE
Q 044575 75 PRE-------------IMGYTDFPFVL---KKGRDVR-------RFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGM 131 (454)
Q Consensus 75 ~~~-------------~~~~~~~~~~~---~~~~~~~-------~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~ 131 (454)
+.. .+.-.+.++.. ..+...+ .......+...|.+.+++.++. ++++++|+++..
T Consensus 206 ~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv~--i~~~~~v~~l~~ 283 (571)
T 1y0p_A 206 PALVKVLSSHSKDSVDWMTAMGADLTDVGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNID--LRMNTRGIEVLK 283 (571)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCE--EESSEEEEEEEE
T ss_pred HHHHHHHHHccHHHHHHHHhcCCCCccCcccCCcCCCeeEecCCCCCCHHHHHHHHHHHHHhcCCE--EEeCCEeeEeEE
Confidence 000 00001111110 0000000 0123578889999999988887 999999999987
Q ss_pred cCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccCCCC
Q 044575 132 LDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATGHYS 174 (454)
Q Consensus 132 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG~~~ 174 (454)
.+++. -+-|.+.+. ++...++.+|.||+|||.++
T Consensus 284 ~~~g~--------v~Gv~~~~~-~g~~~~i~a~~VVlAtGg~~ 317 (571)
T 1y0p_A 284 DDKGT--------VKGILVKGM-YKGYYWVKADAVILATGGFA 317 (571)
T ss_dssp CTTSC--------EEEEEEEET-TTEEEEEECSEEEECCCCCT
T ss_pred cCCCe--------EEEEEEEeC-CCcEEEEECCeEEEeCCCcc
Confidence 64221 233555542 23455789999999999654
No 129
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.05 E-value=1.4e-09 Score=111.33 Aligned_cols=145 Identities=14% Similarity=0.093 Sum_probs=86.0
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCC------------Cc--ccccc---ccceecC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQT------------EV--HSSVY---ASLRLTS 74 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~------------~~--~~~~~---~~~~~~~ 74 (454)
.+||+||||||+|+++|..|++.|.+|+|||+.+.++....-....+.. .. ..+.. .......
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 105 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRVGTIGPRSMELFRRWGVAKQIRTAGWPGDHPLDAAWVTR 105 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCCCEECHHHHHHHHHTTCHHHHHTSSCCTTSBCCEEEESS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCChHHHHhhcCCcccccceEEecc
Confidence 4799999999999999999999999999999987664321100000000 00 00000 0000000
Q ss_pred --CccccccCCCCCCCCC-------CCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCc
Q 044575 75 --PREIMGYTDFPFVLKK-------GRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIK 145 (454)
Q Consensus 75 --~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~ 145 (454)
...+.. ++++... ........++..+.++|.+.+.+. ++++++|++++..++ .
T Consensus 106 ~~g~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~-----v~~~~~v~~~~~~~~----------~ 167 (549)
T 2r0c_A 106 VGGHEVYR---IPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER-----LRTRSRLDSFEQRDD----------H 167 (549)
T ss_dssp BTSCEEEE---ECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG-----EECSEEEEEEEECSS----------C
T ss_pred CCCceeEe---ecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh-----cccCcEEEEEEEeCC----------E
Confidence 000000 1111000 001112346778888888887765 789999999987643 6
Q ss_pred EEEEEeecCCCeEEEEEeCEEEEccCCCC
Q 044575 146 WVVKSKEKKADKVVEEVFDAVVVATGHYS 174 (454)
Q Consensus 146 ~~v~~~~~~~~~~~~~~~d~vViAtG~~~ 174 (454)
+++++.+..++...++++|+||.|+|.+|
T Consensus 168 v~v~~~~~~~G~~~~i~a~~vVgADG~~S 196 (549)
T 2r0c_A 168 VRATITDLRTGATRAVHARYLVACDGASS 196 (549)
T ss_dssp EEEEEEETTTCCEEEEEEEEEEECCCTTC
T ss_pred EEEEEEECCCCCEEEEEeCEEEECCCCCc
Confidence 78888763323345789999999999655
No 130
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.04 E-value=1.7e-09 Score=111.32 Aligned_cols=151 Identities=16% Similarity=0.209 Sum_probs=88.8
Q ss_pred CCcEEEECcChHHHHHHHHHHHc------CCcEEEEeeCCCCCcccccCCCCCCC----Cc------ccccc-----ccc
Q 044575 12 SKNVCVIGAGPSGLVAARELRKE------GHRVVVLEQNHDVGGQWLYDPNTDQT----EV------HSSVY-----ASL 70 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~------g~~v~vie~~~~~GG~w~~~~~~~~~----~~------~~~~~-----~~~ 70 (454)
.+||+|||||+||+++|..|++. |.+|+||||.+.+|+........... ++ ..+.. ..+
T Consensus 35 ~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~ll~~~~~~g~~~~~~~~~~~~ 114 (584)
T 2gmh_A 35 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEELFPDWKEKGAPLNTPVTEDRF 114 (584)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHHCTTHHHHTCCCCEECCEEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHHHHHHHhcCCceeeeechhhe
Confidence 47999999999999999999999 99999999998887643211111100 00 00000 000
Q ss_pred eecCCccccccCCCCC-CCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEE
Q 044575 71 RLTSPREIMGYTDFPF-VLKKGRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVK 149 (454)
Q Consensus 71 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~ 149 (454)
..........+...+. .. ........++.++.+.|.+.+++.++. ++++++|+++...+++. .+.|+
T Consensus 115 ~~~~~~~~~~~~~~~~~~~--~~~~~~~v~r~~l~~~L~~~a~~~Gv~--i~~g~~v~~l~~~~~g~--------V~gV~ 182 (584)
T 2gmh_A 115 GILTEKYRIPVPILPGLPM--NNHGNYVVRLGHLVSWMGEQAEALGVE--VYPGYAAAEILFHEDGS--------VKGIA 182 (584)
T ss_dssp EEECSSCEEECCCCTTSTT--CCTTCEECCHHHHHHHHHHHHHHTTCE--EETTCCEEEEEECTTSS--------EEEEE
T ss_pred eeeccCCCccccccCcccc--ccCCCEEEeHHHHHHHHHHHHHHcCCE--EEcCCEEEEEEEcCCCC--------EEEEE
Confidence 0000000011110110 00 001122356788999999999988887 99999999998765321 22355
Q ss_pred Eeec---CCCeE-------EEEEeCEEEEccCCCC
Q 044575 150 SKEK---KADKV-------VEEVFDAVVVATGHYS 174 (454)
Q Consensus 150 ~~~~---~~~~~-------~~~~~d~vViAtG~~~ 174 (454)
+.+. .++.. .++.+|+||+|+|.++
T Consensus 183 ~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S 217 (584)
T 2gmh_A 183 TNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHG 217 (584)
T ss_dssp ECCEEECTTSCEEEEEECCCEEECSEEEECCCTTC
T ss_pred eCCccccCCCCcccccCCceEEECCEEEEeeCCCc
Confidence 5420 01111 3789999999999654
No 131
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.04 E-value=5.3e-10 Score=109.09 Aligned_cols=60 Identities=20% Similarity=0.063 Sum_probs=46.1
Q ss_pred CCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccCCCC
Q 044575 97 FPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATGHYS 174 (454)
Q Consensus 97 ~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG~~~ 174 (454)
.....++...+.+.+++.++. +.++++|++|...++ .|.|++.++ ++.+|+||+|+|.++
T Consensus 160 ~~~~~~~~~~l~~~~~~~g~~--i~~~~~v~~i~~~~~----------~~~v~~~~g------~~~a~~vV~A~G~~s 219 (382)
T 1ryi_A 160 HVEPYFVCKAYVKAAKMLGAE--IFEHTPVLHVERDGE----------ALFIKTPSG------DVWANHVVVASGVWS 219 (382)
T ss_dssp BCCHHHHHHHHHHHHHHTTCE--EETTCCCCEEECSSS----------SEEEEETTE------EEEEEEEEECCGGGT
T ss_pred EEcHHHHHHHHHHHHHHCCCE--EEcCCcEEEEEEECC----------EEEEEcCCc------eEEcCEEEECCChhH
Confidence 345678888999989888887 889999999986543 676655322 689999999999644
No 132
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.04 E-value=1.2e-09 Score=111.97 Aligned_cols=65 Identities=18% Similarity=0.018 Sum_probs=49.7
Q ss_pred CHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccCCCC
Q 044575 99 GHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATGHYS 174 (454)
Q Consensus 99 ~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG~~~ 174 (454)
....+...+...+.+.|.. +.++++|+++...++. -|.|++.+..++...++.+|.||+|+|.++
T Consensus 168 d~~~l~~~L~~~a~~~G~~--i~~~~~V~~l~~~~g~---------v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 168 DDARLTLEIMKEAVARGAV--ALNYMKVESFIYDQGK---------VVGVVAKDRLTDTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp CHHHHHHHHHHHHHHTTCE--EEESEEEEEEEEETTE---------EEEEEEEETTTCCEEEEEEEEEEECCGGGH
T ss_pred cHHHHHHHHHHHHHHcCCE--EEcCCEEEEEEEcCCe---------EEEEEEEEcCCCceEEEECCEEEECCCcch
Confidence 3466777777778888887 9999999999886432 466888764444556889999999999754
No 133
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.03 E-value=6.6e-10 Score=111.14 Aligned_cols=142 Identities=17% Similarity=0.079 Sum_probs=85.1
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCC--CcccccCCCCCCC-----Ccccc-------ccccceecCCcc
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDV--GGQWLYDPNTDQT-----EVHSS-------VYASLRLTSPRE 77 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~--GG~w~~~~~~~~~-----~~~~~-------~~~~~~~~~~~~ 77 (454)
.+||+|||||++|+++|..|++.|++|+|||+.+.. |..+.... .... -.... .........+..
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~-l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 84 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDA-VSKAHFDKLGMPYPKGEELENKINGIKLYSPDM 84 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCE-EEHHHHHHTTCCCCCGGGEEEEEEEEEEECTTS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCccccccc-ccHHHHHHhcCCCCchHHHHhhhcceEEECCCC
Confidence 489999999999999999999999999999998753 22211000 0000 00000 000000001100
Q ss_pred ccccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEE-EEEeecCCC
Q 044575 78 IMGYTDFPFVLKKGRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWV-VKSKEKKAD 156 (454)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~-v~~~~~~~~ 156 (454)
.. .++++ .......+.++.+.|.+.+.+.++. ++++++|+++...++ ... |++.+..++
T Consensus 85 ~~---~~~~~-----~~~~~i~r~~l~~~L~~~a~~~gv~--i~~~~~v~~i~~~~~----------~v~gv~~~~~~~G 144 (453)
T 3atr_A 85 QT---VWTVN-----GEGFELNAPLYNQRVLKEAQDRGVE--IWDLTTAMKPIFEDG----------YVKGAVLFNRRTN 144 (453)
T ss_dssp SC---EEEEE-----EEEEEECHHHHHHHHHHHHHHTTCE--EESSEEEEEEEEETT----------EEEEEEEEETTTT
T ss_pred ce---EEeEC-----CCcEEEcHHHHHHHHHHHHHHcCCE--EEeCcEEEEEEEECC----------EEEEEEEEEcCCC
Confidence 00 00000 0011245678889999988888877 999999999987543 332 555532123
Q ss_pred eEEEEEeCEEEEccCCCC
Q 044575 157 KVVEEVFDAVVVATGHYS 174 (454)
Q Consensus 157 ~~~~~~~d~vViAtG~~~ 174 (454)
...++.+|.||.|+|.++
T Consensus 145 ~~~~~~ad~VV~AdG~~s 162 (453)
T 3atr_A 145 EELTVYSKVVVEATGYSR 162 (453)
T ss_dssp EEEEEECSEEEECCGGGC
T ss_pred ceEEEEcCEEEECcCCch
Confidence 445789999999999544
No 134
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.03 E-value=2.8e-10 Score=103.13 Aligned_cols=146 Identities=18% Similarity=0.185 Sum_probs=92.7
Q ss_pred CeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCC-----------------c---------------CccchhhhccC--
Q 044575 206 EVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLN-----------------I---------------SEGLSKVISKH-- 251 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~-----------------~---------------~~~~~~~l~~~-- 251 (454)
-+|+|||+|++|+++|..|++.+.+|+++++... + ...+.+.+.+.
T Consensus 4 ~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~~~l~~~~~~~~g 83 (232)
T 2cul_A 4 YQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMPFLPPKPPFPPGSLLERAYDPKDERVWAFHARAKYLLEGLRP 83 (232)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCCCSCCCTTCHHHHHCCTTCCCHHHHHHHHHHHHHTCTT
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCcccCccccccchhhHHhhhccCCCCCHHHHHHHHHHHHHcCCC
Confidence 3699999999999999999999999999998621 0 01112223332
Q ss_pred CCeEEcCceeEEecC-C---cEEEeCCCEEeeceEEEccCcccCCcC-----------------------CCCCCceeeC
Q 044575 252 NNLHLHPQIDCLRED-G---RVTFVDGCWVTADTILYCTGYSYSFPF-----------------------LDTKGIVVVD 304 (454)
Q Consensus 252 ~~i~~~~~v~~v~~~-~---~v~~~dG~~i~~D~vI~atG~~~~~~~-----------------------l~~~g~i~v~ 304 (454)
.+++ ...|+++..+ + .|.+.+|+++++|.||+|||...+... |.+.+ +.++
T Consensus 84 v~i~-~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~~~~~~G~~~~~~g~~g~~~~~~l~~~l~~~g-~~~~ 161 (232)
T 2cul_A 84 LHLF-QATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFLGARLFLGGVVEEAGRLSEASYPDLLEDLSRLG-FRFV 161 (232)
T ss_dssp EEEE-ECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCSSCEEEETTEEESEEETTEECCSHHHHHHHHTT-CCEE
T ss_pred cEEE-EeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChhhceecCCccCCCCCCcccchhhhCHHHHhCC-CeEE
Confidence 2344 5678887633 2 366778888999999999999544221 00011 0010
Q ss_pred C----------C----------CcccccCcccCCCCCCCceEecccccccchhHHHHHHHHHHHHHcCC
Q 044575 305 D----------D----------RVGPLYEHTFPPSLAPSLSFVGIPRKLIGFPFFESQAKWIAQLLSGK 353 (454)
Q Consensus 305 ~----------~----------~~~~~~~~~~~~~~~p~l~~iG~~~~~~~~~~a~~qa~~~a~~i~g~ 353 (454)
. . ...+.-+..+..+..|+||++|++.....+..+..|++.+|.+|..+
T Consensus 162 ~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~t~~p~iya~G~~a~~g~~~~~~~~g~~~a~~i~~~ 230 (232)
T 2cul_A 162 EREGEVPETPSTPGYRVRYLAFHPEEWEEKTFRLKRLEGLYAVGLCVREGDYARMSEEGKRLAEHLLHE 230 (232)
T ss_dssp EEEEEEC-----CCEEEEEEEECGGGEETTTTEETTSBSEEECGGGTSCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccCcCCCCCCccCchhhcccCCCCCccccccccccceeeeecccCccHHHHHHHHHHHHHHHHhh
Confidence 0 0 00000111222235799999999992235678889999999988543
No 135
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.99 E-value=2.1e-09 Score=104.77 Aligned_cols=59 Identities=17% Similarity=0.048 Sum_probs=45.7
Q ss_pred CCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEE-EEEeecCCCeEEEEEeCEEEEccCCCC
Q 044575 98 PGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWV-VKSKEKKADKVVEEVFDAVVVATGHYS 174 (454)
Q Consensus 98 ~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~d~vViAtG~~~ 174 (454)
.....+...+.+.+++.++. +.++++|+++...++ .|. |++.++ ++.+|+||+|+|.++
T Consensus 146 ~~~~~l~~~l~~~~~~~Gv~--i~~~~~v~~i~~~~~----------~v~gv~~~~g------~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 146 ADPFEATTAFAVKAKEYGAK--LLEYTEVKGFLIENN----------EIKGVKTNKG------IIKTGIVVNATNAWA 205 (382)
T ss_dssp ECHHHHHHHHHHHHHHTTCE--EECSCCEEEEEESSS----------BEEEEEETTE------EEECSEEEECCGGGH
T ss_pred ECHHHHHHHHHHHHHHCCCE--EECCceEEEEEEECC----------EEEEEEECCc------EEECCEEEECcchhH
Confidence 34677888888888888887 889999999987643 566 665432 689999999999654
No 136
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.99 E-value=2.1e-09 Score=105.43 Aligned_cols=149 Identities=17% Similarity=0.144 Sum_probs=83.5
Q ss_pred CcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCC------CcccccCCCCCCCCcccccccccee-cCCcccccc--C-
Q 044575 13 KNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDV------GGQWLYDPNTDQTEVHSSVYASLRL-TSPREIMGY--T- 82 (454)
Q Consensus 13 ~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~------GG~w~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~- 82 (454)
+||+|||||++|+++|..|++.|++|+|||+.+.. ++.. ..+..-..+-....++.+.. ..+...+.+ .
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~-l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~ 81 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGV-LEQGMVDLLREAGVDRRMARDGLVHEGVEIAFAG 81 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCE-ECHHHHHHHHHTTCCHHHHHHCEEESCEEEEETT
T ss_pred ccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEe-ECHHHHHHHHHcCCcHHHHhcCCccceEEEEECC
Confidence 68999999999999999999999999999997642 1110 00000000000000000000 000000000 0
Q ss_pred ---CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEE
Q 044575 83 ---DFPFVLKKGRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVV 159 (454)
Q Consensus 83 ---~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 159 (454)
.+.++............+.++.+.+.+.+.+.++. ++++++|++++..+++ .+.|++.+. +...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~--i~~~~~v~~i~~~~~~---------~~~v~~~~~--g~~~ 148 (394)
T 1k0i_A 82 QRRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGAT--TVYQAAEVRLHDLQGE---------RPYVTFERD--GERL 148 (394)
T ss_dssp EEEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCE--EESSCEEEEEECTTSS---------SCEEEEEET--TEEE
T ss_pred ceEEeccccccCCCceEEechHHHHHHHHHHHHhcCCe--EEeceeEEEEEEecCC---------ceEEEEecC--CcEE
Confidence 00000000001111235677888888888777776 9999999999865332 577777322 3334
Q ss_pred EEEeCEEEEccCCCCC
Q 044575 160 EEVFDAVVVATGHYSY 175 (454)
Q Consensus 160 ~~~~d~vViAtG~~~~ 175 (454)
++.+|.||.|+|.++.
T Consensus 149 ~~~a~~vV~AdG~~S~ 164 (394)
T 1k0i_A 149 RLDCDYIAGCDGFHGI 164 (394)
T ss_dssp EEECSEEEECCCTTCS
T ss_pred EEEeCEEEECCCCCcH
Confidence 6899999999996554
No 137
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.99 E-value=2.3e-09 Score=112.65 Aligned_cols=59 Identities=22% Similarity=0.341 Sum_probs=47.8
Q ss_pred CHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccCCCC
Q 044575 99 GHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATGHYS 174 (454)
Q Consensus 99 ~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG~~~ 174 (454)
....+...+.+.+++.++. ++++++|+++...++ .|.|++.++. ++.+|+||+|||.++
T Consensus 415 ~p~~l~~aL~~~a~~~Gv~--i~~~t~V~~l~~~~~----------~v~V~t~~G~-----~i~Ad~VVlAtG~~s 473 (676)
T 3ps9_A 415 CPAELTRNVLELAQQQGLQ--IYYQYQLQNFSRKDD----------CWLLNFAGDQ-----QATHSVVVLANGHQI 473 (676)
T ss_dssp CHHHHHHHHHHHHHHTTCE--EEESCCEEEEEEETT----------EEEEEETTSC-----EEEESEEEECCGGGG
T ss_pred CHHHHHHHHHHHHHhCCCE--EEeCCeeeEEEEeCC----------eEEEEECCCC-----EEECCEEEECCCcch
Confidence 4567888888888888887 999999999987643 6878776544 689999999999754
No 138
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.99 E-value=4.2e-10 Score=106.63 Aligned_cols=108 Identities=17% Similarity=0.169 Sum_probs=63.8
Q ss_pred CCcEEEECcChHHHHHHHHHHHc--CCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCcc--ccccCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKE--GHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPRE--IMGYTDFPFV 87 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~--g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 87 (454)
.+||+|||||++|+++|..|++. |++|+|||+.+.+||.....++.... .... +.. .+.-.+.++.
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~---------~~~~-~~~~~~L~~~Gv~~~ 148 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSA---------MVMR-KPADVFLDEVGVPYE 148 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCC---------EEEE-TTTHHHHHHHTCCCE
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchh---------hhcc-hHHHHHHHHcCCccc
Confidence 58999999999999999999997 99999999998887543322222111 1110 000 0000112221
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHH-hCCCccEEeCeEEEEEEEcC
Q 044575 88 LKKGRDVRRFPGHKELWLYLKDFCQR-FGLREMIRFNTRVEYVGMLD 133 (454)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~yl~~~~~~-~~~~~~i~~~~~V~~v~~~~ 133 (454)
.. + .........++.+.|.+.+.. .++. ++++++|+++...+
T Consensus 149 ~~-G-~~~~~~~~~d~~~~L~~~a~~~~gV~--i~~~~~V~dLi~~~ 191 (344)
T 3jsk_A 149 DE-G-DYVVVKHAALFTSTVLSKVLQRPNVK--LFNATTVEDLITRK 191 (344)
T ss_dssp EC-S-SEEEESCHHHHHHHHHHHHHTCTTEE--EEETEEEEEEEEEE
T ss_pred cc-C-CeEEEecHHHHHHHHHHHHHhCCCCE--EEeCCEEEEEEecC
Confidence 10 0 000011235556666666655 3665 88899999887654
No 139
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.98 E-value=1.2e-09 Score=106.07 Aligned_cols=62 Identities=16% Similarity=0.135 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccCCCCCCCCC
Q 044575 100 HKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATGHYSYPRLP 179 (454)
Q Consensus 100 ~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG~~~~p~~p 179 (454)
...+...+.+.+.+.++. +.++++|+++...++ .|.|++.++ ++.+|+||+|+|.++....+
T Consensus 148 ~~~l~~~l~~~~~~~G~~--i~~~~~V~~i~~~~~----------~~~v~~~~g------~~~a~~vV~a~G~~s~~l~~ 209 (372)
T 2uzz_A 148 SELAIKTWIQLAKEAGCA--QLFNCPVTAIRHDDD----------GVTIETADG------EYQAKKAIVCAGTWVKDLLP 209 (372)
T ss_dssp HHHHHHHHHHHHHHTTCE--EECSCCEEEEEECSS----------SEEEEESSC------EEEEEEEEECCGGGGGGTST
T ss_pred HHHHHHHHHHHHHHCCCE--EEcCCEEEEEEEcCC----------EEEEEECCC------eEEcCEEEEcCCccHHhhcc
Confidence 457788888888888887 889999999987543 677765432 58999999999976544333
No 140
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.96 E-value=1.3e-09 Score=108.23 Aligned_cols=47 Identities=36% Similarity=0.569 Sum_probs=41.5
Q ss_pred CcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCccccc--CCCCCC
Q 044575 13 KNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLY--DPNTDQ 59 (454)
Q Consensus 13 ~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~--~~~~~~ 59 (454)
+||+|||||++|++||..|++.|.+|+|+|+++.+||.+.. ..|.|.
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~t~~~~cipg 50 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGRAYSRESRNVPG 50 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEEECSSSTT
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCeecceeccCCCC
Confidence 68999999999999999999999999999999999998763 355444
No 141
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.93 E-value=3.1e-09 Score=104.48 Aligned_cols=35 Identities=40% Similarity=0.595 Sum_probs=32.5
Q ss_pred CcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCC
Q 044575 13 KNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDV 47 (454)
Q Consensus 13 ~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~ 47 (454)
.+|+||||||+|+++|..|++.|++|+||||.+.+
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~ 36 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAA 36 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCC
Confidence 47999999999999999999999999999997754
No 142
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.92 E-value=1.4e-08 Score=104.28 Aligned_cols=152 Identities=23% Similarity=0.226 Sum_probs=89.1
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCC----CCC-----c-cc--cccccce-----ecC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTD----QTE-----V-HS--SVYASLR-----LTS 74 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~----~~~-----~-~~--~~~~~~~-----~~~ 74 (454)
.+||+|||||++|+++|..|++.|.+|+|||+.+.+||........- +.. . .+ ..+..+. .+.
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~~ 205 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMKGGRNIND 205 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCCCCTHHHHHHHHHHTTTCSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCCC
Confidence 57999999999999999999999999999999998887654332100 000 0 00 0000000 000
Q ss_pred Ccc----------c---cccCCCCCCCC---CCCCC-------CCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEE
Q 044575 75 PRE----------I---MGYTDFPFVLK---KGRDV-------RRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGM 131 (454)
Q Consensus 75 ~~~----------~---~~~~~~~~~~~---~~~~~-------~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~ 131 (454)
+.. . +.-.+.++... .+... ........+...|.+.+++.++. ++++++|+++..
T Consensus 206 ~~~v~~~~~~~~~~i~~l~~~Gv~~~~~~~~gg~~~~r~~~~~~~~~~g~~l~~~L~~~~~~~gv~--i~~~t~v~~l~~ 283 (572)
T 1d4d_A 206 PELVKVLANNSSDSIDWLTSMGADMTDVGRMGGASVNRSHRPTGGAGVGAHVAQVLWDNAVKRGTD--IRLNSRVVRILE 283 (572)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCE--EESSEEEEEEEE
T ss_pred HHHHHHHHHccHHHHHHHHhcCCccccccccCCCcCCeeEecCCCCCCHHHHHHHHHHHHHHcCCe--EEecCEEEEEEE
Confidence 000 0 00001111100 00000 01123678889999999998887 999999999976
Q ss_pred cCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccCCCC
Q 044575 132 LDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATGHYS 174 (454)
Q Consensus 132 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG~~~ 174 (454)
.+++. -+-|.+.+. ++...++.+|.||+|||.++
T Consensus 284 ~~~g~--------v~GV~~~~~-~G~~~~i~A~~VVlAtGg~~ 317 (572)
T 1d4d_A 284 DASGK--------VTGVLVKGE-YTGYYVIKADAVVIAAGGFA 317 (572)
T ss_dssp C--CC--------EEEEEEEET-TTEEEEEECSEEEECCCCCT
T ss_pred CCCCe--------EEEEEEEeC-CCcEEEEEcCEEEEeCCCCc
Confidence 54121 344555542 23445789999999999654
No 143
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.92 E-value=4.1e-09 Score=106.93 Aligned_cols=40 Identities=35% Similarity=0.518 Sum_probs=37.2
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCccc
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQW 51 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w 51 (454)
.+||||||||++|++||..|++.|.+|+|+||.+.+||.-
T Consensus 41 ~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~GG~s 80 (510)
T 4at0_A 41 EADVVVAGYGIAGVAASIEAARAGADVLVLERTSGWGGAT 80 (510)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTG
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcc
Confidence 5799999999999999999999999999999999888754
No 144
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.91 E-value=2.2e-09 Score=104.48 Aligned_cols=58 Identities=16% Similarity=0.108 Sum_probs=46.0
Q ss_pred CHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccCCCC
Q 044575 99 GHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATGHYS 174 (454)
Q Consensus 99 ~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG~~~ 174 (454)
....+...+.+.+++.++. ++++++|++|...++ .|.|++.++ ++.+|+||+|+|.++
T Consensus 152 ~~~~~~~~l~~~a~~~Gv~--i~~~~~V~~i~~~~~----------~~~V~t~~g------~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 152 DTDALHQGYLRGIRRNQGQ--VLCNHEALEIRRVDG----------AWEVRCDAG------SYRAAVLVNAAGAWC 209 (381)
T ss_dssp CHHHHHHHHHHHHHHTTCE--EESSCCCCEEEEETT----------EEEEECSSE------EEEESEEEECCGGGH
T ss_pred CHHHHHHHHHHHHHHCCCE--EEcCCEEEEEEEeCC----------eEEEEeCCC------EEEcCEEEECCChhH
Confidence 4567888888888888887 889999999987643 677766543 689999999999654
No 145
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.88 E-value=1e-08 Score=106.74 Aligned_cols=158 Identities=16% Similarity=0.078 Sum_probs=89.2
Q ss_pred CCCcEEEECcChHHHHHHHHHHH-cCCcEEEEeeCCCCCcccccCCCCCCC--------C----cc-ccccccceecCC-
Q 044575 11 QSKNVCVIGAGPSGLVAARELRK-EGHRVVVLEQNHDVGGQWLYDPNTDQT--------E----VH-SSVYASLRLTSP- 75 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~-~g~~v~vie~~~~~GG~w~~~~~~~~~--------~----~~-~~~~~~~~~~~~- 75 (454)
..+||+||||||+|+++|..|++ .|.+|+|||+.+..+....-....+.. . .. ...........+
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~g~a~~l~~~t~e~l~~lGl~~~~~~~~~~~~~~~~~~~~ 110 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELGQADGIACRTMEMFEAFEFADSILKEACWINDVTFWKPD 110 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSSCSCCEECHHHHHHHHHTTCHHHHHHHSEEECEEEEEEEC
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCcHHHHHHhcccccceEEECCC
Confidence 35799999999999999999999 999999999987653221100000000 0 00 000000000000
Q ss_pred ----ccccccCCCCCCCCC-CCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEE
Q 044575 76 ----REIMGYTDFPFVLKK-GRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKS 150 (454)
Q Consensus 76 ----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~ 150 (454)
..+.....++..... ........++..+.++|.+.+.+.+....++++++|++++..+++. .. .++|++
T Consensus 111 ~~~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~-----~~-~v~v~~ 184 (639)
T 2dkh_A 111 PGQPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAA-----DY-PVTVTL 184 (639)
T ss_dssp TTSTTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCS-----SC-CEEEEE
T ss_pred CCCCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCC-----cC-CEEEEE
Confidence 000000000000000 0001123567889999999999987622389999999998764210 01 477777
Q ss_pred eec---CCCeEEEEEeCEEEEccCCCC
Q 044575 151 KEK---KADKVVEEVFDAVVVATGHYS 174 (454)
Q Consensus 151 ~~~---~~~~~~~~~~d~vViAtG~~~ 174 (454)
.+. .++...++++|+||.|+|.+|
T Consensus 185 ~~~~~~~~G~~~~i~a~~vVgADG~~S 211 (639)
T 2dkh_A 185 ERCDAAHAGQIETVQARYVVGCDGARS 211 (639)
T ss_dssp EECSGGGTTCEEEEEEEEEEECCCTTC
T ss_pred EeccccCCCCeEEEEeCEEEECCCcch
Confidence 641 113345789999999999655
No 146
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.87 E-value=8.2e-09 Score=101.24 Aligned_cols=36 Identities=44% Similarity=0.746 Sum_probs=33.4
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDV 47 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~ 47 (454)
.+||+|||||++|+++|..|++.|.+|+|+|+.+..
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~~ 39 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVAERGHRVLVLERHTFF 39 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTT
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 479999999999999999999999999999998654
No 147
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.86 E-value=9.4e-09 Score=100.95 Aligned_cols=60 Identities=17% Similarity=-0.018 Sum_probs=45.9
Q ss_pred CCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccCCCC
Q 044575 98 PGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATGHYS 174 (454)
Q Consensus 98 ~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG~~~ 174 (454)
.....+...+.+.+++.++. ++++++|+++...++. .|.|++.++ ++.+|+||+|+|.++
T Consensus 171 ~~~~~~~~~l~~~~~~~g~~--i~~~~~v~~i~~~~~~---------~~~v~~~~g------~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 171 AKHDHVAWAFARKANEMGVD--IIQNCEVTGFIKDGEK---------VTGVKTTRG------TIHAGKVALAGAGHS 230 (405)
T ss_dssp CCHHHHHHHHHHHHHHTTCE--EECSCCEEEEEESSSB---------EEEEEETTC------CEEEEEEEECCGGGH
T ss_pred CCHHHHHHHHHHHHHHCCCE--EEcCCeEEEEEEeCCE---------EEEEEeCCc------eEECCEEEECCchhH
Confidence 34567888888888888887 8999999999876432 466766432 578999999999543
No 148
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.84 E-value=1.6e-08 Score=102.30 Aligned_cols=64 Identities=22% Similarity=0.242 Sum_probs=49.2
Q ss_pred CHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccCCCC
Q 044575 99 GHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATGHYS 174 (454)
Q Consensus 99 ~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG~~~ 174 (454)
....+...+.+.+.+.|+. +.++++|+++...+ . .|.|++.+..++...++.+|.||+|+|.++
T Consensus 147 ~~~~l~~~l~~~a~~~Gv~--i~~~~~V~~l~~~~-~---------~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s 210 (501)
T 2qcu_A 147 DDARLVLANAQMVVRKGGE--VLTRTRATSARREN-G---------LWIVEAEDIDTGKKYSWQARGLVNATGPWV 210 (501)
T ss_dssp CHHHHHHHHHHHHHHTTCE--EECSEEEEEEEEET-T---------EEEEEEEETTTCCEEEEEESCEEECCGGGH
T ss_pred cHHHHHHHHHHHHHHcCCE--EEcCcEEEEEEEeC-C---------EEEEEEEECCCCCEEEEECCEEEECCChhH
Confidence 4567778888888888887 88999999998764 2 688888653334445789999999999754
No 149
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.83 E-value=2.1e-08 Score=100.17 Aligned_cols=102 Identities=26% Similarity=0.226 Sum_probs=79.9
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKKG 91 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (454)
.++|+|||||++|+.+|..|++.|.+|+++|+.+.+. |.
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l------------------------------------~~----- 205 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRIL------------------------------------PT----- 205 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC------------------------------------TT-----
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccc------------------------------------cc-----
Confidence 4789999999999999999999999999999976430 00
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccC
Q 044575 92 RDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATG 171 (454)
Q Consensus 92 ~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG 171 (454)
...++.+.+.+.+++.++. ++++++|.+++..++ .+.+++.++. ++.+|.||+|+|
T Consensus 206 -------~~~~~~~~l~~~l~~~Gv~--i~~~~~V~~i~~~~~----------~v~v~~~~g~-----~i~~D~vv~A~G 261 (455)
T 2yqu_A 206 -------MDLEVSRAAERVFKKQGLT--IRTGVRVTAVVPEAK----------GARVELEGGE-----VLEADRVLVAVG 261 (455)
T ss_dssp -------SCHHHHHHHHHHHHHHTCE--EECSCCEEEEEEETT----------EEEEEETTSC-----EEEESEEEECSC
T ss_pred -------cCHHHHHHHHHHHHHCCCE--EEECCEEEEEEEeCC----------EEEEEECCCe-----EEEcCEEEECcC
Confidence 1156777788888888988 999999999987542 4556654443 689999999999
Q ss_pred CCCCCCCCC
Q 044575 172 HYSYPRLPS 180 (454)
Q Consensus 172 ~~~~p~~p~ 180 (454)
..|+.+.
T Consensus 262 --~~p~~~~ 268 (455)
T 2yqu_A 262 --RRPYTEG 268 (455)
T ss_dssp --EEECCTT
T ss_pred --CCcCCCC
Confidence 7777643
No 150
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.83 E-value=1.3e-08 Score=95.93 Aligned_cols=108 Identities=21% Similarity=0.334 Sum_probs=63.7
Q ss_pred CCcEEEECcChHHHHHHHHHHHc--CCcEEEEeeCCCCCc-ccccCCCCCCCCccccccccceecCC-ccccccCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKE--GHRVVVLEQNHDVGG-QWLYDPNTDQTEVHSSVYASLRLTSP-REIMGYTDFPFV 87 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~--g~~v~vie~~~~~GG-~w~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 87 (454)
.+||+|||||++|+++|..|++. |.+|+|+|+.+.+|| .|.... .+........ ...+.-.+.++.
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~----------~~~~~~~~~~~~~~L~~~Gv~~~ 134 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQ----------LFSAMVMRKPAHLFLQELEIPYE 134 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGG----------GCCCEEEETTTHHHHHHTTCCCE
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCc----------ccchhhhhhHHHHHHHhhCcccc
Confidence 46999999999999999999998 999999999998874 453111 1111111000 000011122222
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHh-CCCccEEeCeEEEEEEEcC
Q 044575 88 LKKGRDVRRFPGHKELWLYLKDFCQRF-GLREMIRFNTRVEYVGMLD 133 (454)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~yl~~~~~~~-~~~~~i~~~~~V~~v~~~~ 133 (454)
.. + .........++...+.+.+... ++. ++.+++|+++...+
T Consensus 135 ~~-g-~~~~~~~~~~~~~~L~~~a~~~~GV~--i~~~~~V~~Ll~~~ 177 (326)
T 2gjc_A 135 DE-G-DYVVVKHAALFISTVLSKVLQLPNVK--LFNATCVEDLVTRP 177 (326)
T ss_dssp EC-S-SEEEESCHHHHHHHHHHHHHTSTTEE--EETTEEEEEEEECC
T ss_pred cC-C-CeEEEcchHHHHHHHHHHHHHhcCcE--EEecceeeeeeecc
Confidence 10 0 0000113456666666666553 655 78899999997663
No 151
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.82 E-value=7.5e-09 Score=106.81 Aligned_cols=154 Identities=17% Similarity=0.130 Sum_probs=85.6
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcc--------cccCCCCCCCCccccccccc------------
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQ--------WLYDPNTDQTEVHSSVYASL------------ 70 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~--------w~~~~~~~~~~~~~~~~~~~------------ 70 (454)
..+||||||||+||++||..|++.|.+|+|+||....+|. +........+.+....++.+
T Consensus 17 ~~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~~~g~s~~a~GGi~a~~~~~~~ds~~~~~~dtl~~g~~l~d~~~v 96 (621)
T 2h88_A 17 HEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEDDNWRWHFYDTVKGSDWLGDQDAI 96 (621)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTCSCHHHH
T ss_pred ccCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCCCCchhhCCCcEecCCCCCCCCHHHHHHHHHHhcCCCCCHHHH
Confidence 3579999999999999999999999999999998654432 21111100010000000000
Q ss_pred ---eecCCccc--cccCCCCCCCCC----------CCC----------CCCC---CCHHHHHHHHHHHHHHhCCCccEEe
Q 044575 71 ---RLTSPREI--MGYTDFPFVLKK----------GRD----------VRRF---PGHKELWLYLKDFCQRFGLREMIRF 122 (454)
Q Consensus 71 ---~~~~~~~~--~~~~~~~~~~~~----------~~~----------~~~~---~~~~~~~~yl~~~~~~~~~~~~i~~ 122 (454)
..+.+..+ +.-.+.+|.... +.. ...+ .++..+...|.+.+.+.++. +++
T Consensus 97 ~~l~~~s~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~s~~~g~~~~~~R~~~~~d~tG~~l~~~L~~~~~~~gv~--i~~ 174 (621)
T 2h88_A 97 HYMTEQAPAAVIELENYGMPFSRTEEGKIYQRAFGGQSLQFGKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTS--YFV 174 (621)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCBCTTSSBCEECCTTCBSTTTTSCBCCCEECSTTCHHHHHHHHHHHHHTTSCCE--EEE
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCCCceeccccCcccccccCCCcceeEEEecCCCHHHHHHHHHHHHHhCCCE--EEE
Confidence 00000000 000122221100 000 0001 13457777787777777776 999
Q ss_pred CeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccCCCCC
Q 044575 123 NTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATGHYSY 175 (454)
Q Consensus 123 ~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG~~~~ 175 (454)
++.|+++...++. -.-|.+.+..++....+.++.||+|||.++.
T Consensus 175 ~~~v~~Li~~~g~---------v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~ 218 (621)
T 2h88_A 175 EYFALDLLMENGE---------CRGVIALCIEDGTIHRFRAKNTVIATGGYGR 218 (621)
T ss_dssp TEEEEEEEEETTE---------EEEEEEEETTTCCEEEEEEEEEEECCCCCGG
T ss_pred ceEEEEEEEECCE---------EEEEEEEEcCCCcEEEEEcCeEEECCCcccc
Confidence 9999999764321 2335554422344557899999999997654
No 152
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.81 E-value=2.3e-08 Score=105.19 Aligned_cols=61 Identities=18% Similarity=0.308 Sum_probs=46.7
Q ss_pred CHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccCCCCC
Q 044575 99 GHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATGHYSY 175 (454)
Q Consensus 99 ~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG~~~~ 175 (454)
....+...+.+.+++.|+. ++++++|+++...++ .|.|.+.++. .++.+|.||+|+|.++.
T Consensus 410 ~p~~l~~aL~~~a~~~Gv~--i~~~t~V~~l~~~~~----------~v~V~t~~G~----~~i~Ad~VVlAtG~~s~ 470 (689)
T 3pvc_A 410 CPSDLTHALMMLAQQNGMT--CHYQHELQRLKRIDS----------QWQLTFGQSQ----AAKHHATVILATGHRLP 470 (689)
T ss_dssp CHHHHHHHHHHHHHHTTCE--EEESCCEEEEEECSS----------SEEEEEC-CC----CCEEESEEEECCGGGTT
T ss_pred CHHHHHHHHHHHHHhCCCE--EEeCCeEeEEEEeCC----------eEEEEeCCCc----EEEECCEEEECCCcchh
Confidence 4467788888888888887 999999999987643 6888776531 14789999999997643
No 153
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.80 E-value=2e-08 Score=98.02 Aligned_cols=58 Identities=14% Similarity=0.180 Sum_probs=45.0
Q ss_pred CHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccCCCC
Q 044575 99 GHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATGHYS 174 (454)
Q Consensus 99 ~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG~~~ 174 (454)
...++...+.+.+++.++. ++++++|++++..++ .|.|++.++ ++.+|.||+|+|.++
T Consensus 148 ~~~~~~~~l~~~~~~~Gv~--i~~~~~v~~i~~~~~----------~~~v~~~~g------~~~a~~vV~A~G~~~ 205 (389)
T 2gf3_A 148 FSENCIRAYRELAEARGAK--VLTHTRVEDFDISPD----------SVKIETANG------SYTADKLIVSMGAWN 205 (389)
T ss_dssp EHHHHHHHHHHHHHHTTCE--EECSCCEEEEEECSS----------CEEEEETTE------EEEEEEEEECCGGGH
T ss_pred eHHHHHHHHHHHHHHCCCE--EEcCcEEEEEEecCC----------eEEEEeCCC------EEEeCEEEEecCccH
Confidence 3467888888888888887 889999999987543 577765322 689999999999643
No 154
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.79 E-value=1.9e-08 Score=103.49 Aligned_cols=154 Identities=18% Similarity=0.118 Sum_probs=86.0
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCccccc-CC---CCC----CCCccccccccc-------------
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLY-DP---NTD----QTEVHSSVYASL------------- 70 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~-~~---~~~----~~~~~~~~~~~~------------- 70 (454)
.+||||||||++|++||..|++.|.+|+|+||.+..+|.-.. .+ +.. .+......++.+
T Consensus 7 ~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~~g~s~~a~GGi~~~~~~~~~ds~~~~~~d~~~~g~~~~d~~~v~ 86 (588)
T 2wdq_A 7 EFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDAIE 86 (588)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTCSCHHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCCCCcchhhCCccEEcCCCCCCCCHHHHHHHHHHhcCCCCCHHHHH
Confidence 479999999999999999999999999999998765432111 00 000 000000000000
Q ss_pred --eecCCccc--cccCCCCCCCCC----------CCC-------C--CCC---CCHHHHHHHHHHHHHHhCCCccEEeCe
Q 044575 71 --RLTSPREI--MGYTDFPFVLKK----------GRD-------V--RRF---PGHKELWLYLKDFCQRFGLREMIRFNT 124 (454)
Q Consensus 71 --~~~~~~~~--~~~~~~~~~~~~----------~~~-------~--~~~---~~~~~~~~yl~~~~~~~~~~~~i~~~~ 124 (454)
..+.+..+ +.-.+.++.... +.. . ..+ ..+..+...|.+.+.+.++. +++++
T Consensus 87 ~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~~g~~~~~~~~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~--i~~~~ 164 (588)
T 2wdq_A 87 YMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTT--IFSEW 164 (588)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCBCTTSSBCEECCTTCBSTTTCSBCCCEECSTTCHHHHHHHHHHHHHHHTTCE--EEETE
T ss_pred HHHHhHHHHHHHHHHcCCCcccCCCCcEeeeecCCccccccccCcceEEEcCCCCHHHHHHHHHHHHHhCCCE--EEeCc
Confidence 00000000 000122221100 000 0 000 12467888888888888887 99999
Q ss_pred EEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccCCCCC
Q 044575 125 RVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATGHYSY 175 (454)
Q Consensus 125 ~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG~~~~ 175 (454)
.|+++...+++. -+-|.+.+..++....+.+|.||+|||.++.
T Consensus 165 ~v~~L~~~~~g~--------v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~~ 207 (588)
T 2wdq_A 165 YALDLVKNQDGA--------VVGCTALCIETGEVVYFKARATVLATGGAGR 207 (588)
T ss_dssp EEEEEEECTTSC--------EEEEEEEETTTCCEEEEEEEEEEECCCCCGG
T ss_pred EEEEEEECCCCE--------EEEEEEEEcCCCeEEEEEcCEEEECCCCCcc
Confidence 999998752221 2345554422344557899999999997553
No 155
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=98.79 E-value=3.5e-08 Score=103.07 Aligned_cols=36 Identities=33% Similarity=0.602 Sum_probs=33.2
Q ss_pred CCcEEEECcChHHHHHHHHHHH-----cCCcEEEEeeCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRK-----EGHRVVVLEQNHDV 47 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~-----~g~~v~vie~~~~~ 47 (454)
.+||+||||||+|+++|..|++ .|++|+|||+.+..
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~ 48 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTK 48 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSC
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCC
Confidence 4799999999999999999999 99999999997653
No 156
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.78 E-value=4.8e-09 Score=96.75 Aligned_cols=40 Identities=33% Similarity=0.629 Sum_probs=38.3
Q ss_pred CcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccc
Q 044575 13 KNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWL 52 (454)
Q Consensus 13 ~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~ 52 (454)
.||+|||||||||+||..|++.|++|+||||++.+||.+.
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~~ 42 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMS 42 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCccc
Confidence 6899999999999999999999999999999999999875
No 157
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.75 E-value=9.6e-08 Score=96.05 Aligned_cols=107 Identities=22% Similarity=0.311 Sum_probs=82.2
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKKG 91 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (454)
.++|+|||||+.|+.+|..|++.|.+|+++|+.+.+...
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~----------------------------------------- 221 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGAS----------------------------------------- 221 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSS-----------------------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccccc-----------------------------------------
Confidence 478999999999999999999999999999997643110
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEc-CCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEcc
Q 044575 92 RDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGML-DCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVAT 170 (454)
Q Consensus 92 ~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAt 170 (454)
...++.+++.+..++.++. ++++++|.+++.. ++. .+.|++.+..++...++.+|.||+|+
T Consensus 222 -------~~~~~~~~l~~~l~~~gv~--i~~~~~v~~i~~~~~~~---------~~~v~~~~~~~g~~~~~~~D~vv~a~ 283 (478)
T 1v59_A 222 -------MDGEVAKATQKFLKKQGLD--FKLSTKVISAKRNDDKN---------VVEIVVEDTKTNKQENLEAEVLLVAV 283 (478)
T ss_dssp -------SCHHHHHHHHHHHHHTTCE--EECSEEEEEEEEETTTT---------EEEEEEEETTTTEEEEEEESEEEECS
T ss_pred -------cCHHHHHHHHHHHHHCCCE--EEeCCEEEEEEEecCCC---------eEEEEEEEcCCCCceEEECCEEEECC
Confidence 0157778888888888988 9999999999862 111 45666653222233478999999999
Q ss_pred CCCCCCCCC
Q 044575 171 GHYSYPRLP 179 (454)
Q Consensus 171 G~~~~p~~p 179 (454)
| ..|+..
T Consensus 284 G--~~p~~~ 290 (478)
T 1v59_A 284 G--RRPYIA 290 (478)
T ss_dssp C--EEECCT
T ss_pred C--CCcCCC
Confidence 9 777764
No 158
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.75 E-value=2e-08 Score=102.61 Aligned_cols=61 Identities=16% Similarity=0.088 Sum_probs=45.5
Q ss_pred CCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccCCCC
Q 044575 98 PGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATGHYS 174 (454)
Q Consensus 98 ~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG~~~ 174 (454)
..+.++..+|.+.+.+.++. ++++ +|+++...+++. .+.|++.++. ++.+|.||+|+|.++
T Consensus 162 i~~~~l~~~L~~~a~~~gv~--~~~~-~v~~i~~~~~g~--------~~~v~~~~g~-----~i~ad~vV~A~G~~s 222 (538)
T 2aqj_A 162 FDAHLVADFLKRWAVERGVN--RVVD-EVVDVRLNNRGY--------ISNLLTKEGR-----TLEADLFIDCSGMRG 222 (538)
T ss_dssp ECHHHHHHHHHHHHHHTTCE--EEEC-CEEEEEECTTSC--------EEEEEETTSC-----EECCSEEEECCGGGC
T ss_pred EeHHHHHHHHHHHHHHCCCE--EEEe-eEeEEEEcCCCc--------EEEEEECCCc-----EEEeCEEEECCCCch
Confidence 35678889999999888887 7888 899998754321 3456665443 689999999999544
No 159
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.73 E-value=8.9e-08 Score=95.89 Aligned_cols=107 Identities=26% Similarity=0.319 Sum_probs=81.7
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKKG 91 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (454)
.++|+|||||+.|+.+|..|++.|.+|+++|+.+.+..
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~------------------------------------------ 206 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILP------------------------------------------ 206 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST------------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCcccc------------------------------------------
Confidence 47899999999999999999999999999999764310
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccC
Q 044575 92 RDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATG 171 (454)
Q Consensus 92 ~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG 171 (454)
....++.+++.+..++.++. ++++++|.+|+..++ ...|++.+..++...++.+|.||+|+|
T Consensus 207 ------~~~~~~~~~l~~~l~~~gV~--i~~~~~v~~i~~~~~----------~~~v~~~~~~~g~~~~i~~D~vv~a~G 268 (464)
T 2eq6_A 207 ------QGDPETAALLRRALEKEGIR--VRTKTKAVGYEKKKD----------GLHVRLEPAEGGEGEEVVVDKVLVAVG 268 (464)
T ss_dssp ------TSCHHHHHHHHHHHHHTTCE--EECSEEEEEEEEETT----------EEEEEEEETTCCSCEEEEESEEEECSC
T ss_pred ------ccCHHHHHHHHHHHHhcCCE--EEcCCEEEEEEEeCC----------EEEEEEeecCCCceeEEEcCEEEECCC
Confidence 01157778888888888988 999999999986532 456666522102223689999999999
Q ss_pred CCCCCCCCC
Q 044575 172 HYSYPRLPS 180 (454)
Q Consensus 172 ~~~~p~~p~ 180 (454)
..|+.+.
T Consensus 269 --~~p~~~~ 275 (464)
T 2eq6_A 269 --RKPRTEG 275 (464)
T ss_dssp --EEESCTT
T ss_pred --cccCCCC
Confidence 7777653
No 160
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.72 E-value=4.4e-09 Score=102.61 Aligned_cols=134 Identities=27% Similarity=0.344 Sum_probs=77.7
Q ss_pred CcEEEECcChHHHHHHHHHHHc--CCcEEEEeeCCCC---CcccccCCCCCCCCcccccc-cc-ceec-CCcccccc--C
Q 044575 13 KNVCVIGAGPSGLVAARELRKE--GHRVVVLEQNHDV---GGQWLYDPNTDQTEVHSSVY-AS-LRLT-SPREIMGY--T 82 (454)
Q Consensus 13 ~~VvIIGaG~aGl~aA~~l~~~--g~~v~vie~~~~~---GG~w~~~~~~~~~~~~~~~~-~~-~~~~-~~~~~~~~--~ 82 (454)
+||+|||||++|+++|..|++. |.+|+|||+++.+ |+.....+..-......... .. +... .+...+.+ .
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDFKLVHH 80 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGGCCEEECCEEEEES
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHHhhccccceEEEeC
Confidence 3799999999999999999999 9999999998776 43322222111000000000 00 0000 00000000 0
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEE
Q 044575 83 DFPFVLKKGRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEV 162 (454)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 162 (454)
+..+....+ .......+.++.+.|.+.+.+.++. ++++++|++++.. . ++.
T Consensus 81 g~~~~~~~~-~~~~~~~r~~l~~~L~~~~~~~gv~--i~~~~~v~~i~~~------------~--------------~~~ 131 (381)
T 3c4a_A 81 NEPSLMSTG-VLLCGVERRGLVHALRDKCRSQGIA--IRFESPLLEHGEL------------P--------------LAD 131 (381)
T ss_dssp SSEEECCCC-SCEEEEEHHHHHHHHHHHHHHTTCE--EETTCCCCSGGGC------------C--------------GGG
T ss_pred CeeEEecCC-CceeeecHHHHHHHHHHHHHHCCCE--EEeCCEeccchhc------------c--------------ccc
Confidence 101100000 0001256789999999999888877 8899988776321 0 236
Q ss_pred eCEEEEccCCCCC
Q 044575 163 FDAVVVATGHYSY 175 (454)
Q Consensus 163 ~d~vViAtG~~~~ 175 (454)
+|.||.|+|.+|.
T Consensus 132 ad~vV~AdG~~S~ 144 (381)
T 3c4a_A 132 YDLVVLANGVNHK 144 (381)
T ss_dssp CSEEEECCGGGGG
T ss_pred CCEEEECCCCCch
Confidence 9999999997665
No 161
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.72 E-value=6.5e-08 Score=96.47 Aligned_cols=102 Identities=18% Similarity=0.153 Sum_probs=81.0
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKKG 91 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (454)
.++|+|||||+.|+.+|..|++.|.+|+++|+.+.+..
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~------------------------------------------ 204 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLP------------------------------------------ 204 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST------------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhh------------------------------------------
Confidence 47899999999999999999999999999998764310
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccC
Q 044575 92 RDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATG 171 (454)
Q Consensus 92 ~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG 171 (454)
. -..++.+.+.+..++.++. ++++++|.+++..+++ ...|++.++. ++.+|.||+|+|
T Consensus 205 ----~--~~~~~~~~l~~~l~~~Gv~--i~~~~~v~~i~~~~~~---------~~~v~~~~g~-----~i~~D~vv~a~G 262 (450)
T 1ges_A 205 ----S--FDPMISETLVEVMNAEGPQ--LHTNAIPKAVVKNTDG---------SLTLELEDGR-----SETVDCLIWAIG 262 (450)
T ss_dssp ----T--SCHHHHHHHHHHHHHHSCE--EECSCCEEEEEECTTS---------CEEEEETTSC-----EEEESEEEECSC
T ss_pred ----h--hhHHHHHHHHHHHHHCCCE--EEeCCEEEEEEEeCCc---------EEEEEECCCc-----EEEcCEEEECCC
Confidence 0 0146777888888888988 9999999999875432 4667776553 789999999999
Q ss_pred CCCCCCCC
Q 044575 172 HYSYPRLP 179 (454)
Q Consensus 172 ~~~~p~~p 179 (454)
..|+..
T Consensus 263 --~~p~~~ 268 (450)
T 1ges_A 263 --REPAND 268 (450)
T ss_dssp --EEESCT
T ss_pred --CCcCCC
Confidence 677764
No 162
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.72 E-value=5.8e-08 Score=104.35 Aligned_cols=59 Identities=17% Similarity=0.059 Sum_probs=44.6
Q ss_pred CHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccCCCC
Q 044575 99 GHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATGHYS 174 (454)
Q Consensus 99 ~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG~~~ 174 (454)
....+...+.+.+++.++. ++++++|++|...++. -+.|.+.++ ++.+|+||+|+|.++
T Consensus 149 ~p~~l~~~L~~~a~~~Gv~--i~~~t~V~~i~~~~~~---------v~~V~t~~G------~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 149 SAARAVQLLIKRTESAGVT--YRGSTTVTGIEQSGGR---------VTGVQTADG------VIPADIVVSCAGFWG 207 (830)
T ss_dssp CHHHHHHHHHHHHHHTTCE--EECSCCEEEEEEETTE---------EEEEEETTE------EEECSEEEECCGGGH
T ss_pred cHHHHHHHHHHHHHHcCCE--EECCceEEEEEEeCCE---------EEEEEECCc------EEECCEEEECCccch
Confidence 4567888888888888887 8899999999875431 234555432 689999999999654
No 163
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=98.70 E-value=7.8e-08 Score=96.27 Aligned_cols=40 Identities=38% Similarity=0.549 Sum_probs=37.2
Q ss_pred CCcEEEECcChHHHHHHHHHHHcC------CcEEEEeeCCCCCccc
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEG------HRVVVLEQNHDVGGQW 51 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g------~~v~vie~~~~~GG~w 51 (454)
.+||+|||||++||+||.+|++.| .+|+|+|+++.+||..
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~ 50 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKI 50 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTC
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceE
Confidence 379999999999999999999999 9999999999999854
No 164
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.70 E-value=3.2e-08 Score=102.08 Aligned_cols=37 Identities=19% Similarity=0.394 Sum_probs=33.7
Q ss_pred CCcEEEECcChHHHHHHHHHHHcC--CcEEEEeeCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEG--HRVVVLEQNHDVG 48 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g--~~v~vie~~~~~G 48 (454)
.+||+|||||++|++||..|++.| .+|+||||.+..+
T Consensus 5 ~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~ 43 (602)
T 1kf6_A 5 QADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMR 43 (602)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGG
T ss_pred cCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCC
Confidence 479999999999999999999999 9999999986543
No 165
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.69 E-value=1.3e-07 Score=94.54 Aligned_cols=104 Identities=19% Similarity=0.201 Sum_probs=80.3
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKKG 91 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (454)
.++|+|||||+.|+.+|..|++.|.+|+++|+.+.+..
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~------------------------------------------ 207 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILS------------------------------------------ 207 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST------------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc------------------------------------------
Confidence 47899999999999999999999999999999764310
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccC
Q 044575 92 RDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATG 171 (454)
Q Consensus 92 ~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG 171 (454)
. ...++.+++.+..++.++. ++++++|.+++..++ ...+++... +...++.+|.||+|+|
T Consensus 208 ----~--~~~~~~~~l~~~l~~~gv~--i~~~~~v~~i~~~~~----------~~~v~~~~~--g~~~~~~~D~vv~a~G 267 (455)
T 1ebd_A 208 ----G--FEKQMAAIIKKRLKKKGVE--VVTNALAKGAEERED----------GVTVTYEAN--GETKTIDADYVLVTVG 267 (455)
T ss_dssp ----T--SCHHHHHHHHHHHHHTTCE--EEESEEEEEEEEETT----------EEEEEEEET--TEEEEEEESEEEECSC
T ss_pred ----c--cCHHHHHHHHHHHHHCCCE--EEeCCEEEEEEEeCC----------eEEEEEEeC--CceeEEEcCEEEECcC
Confidence 0 1157778888888888988 999999999986532 445555421 2234789999999999
Q ss_pred CCCCCCCC
Q 044575 172 HYSYPRLP 179 (454)
Q Consensus 172 ~~~~p~~p 179 (454)
..|+.+
T Consensus 268 --~~p~~~ 273 (455)
T 1ebd_A 268 --RRPNTD 273 (455)
T ss_dssp --EEESCS
T ss_pred --CCcccC
Confidence 777754
No 166
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.69 E-value=3.5e-08 Score=102.56 Aligned_cols=64 Identities=14% Similarity=0.228 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccCCCC
Q 044575 100 HKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATGHYS 174 (454)
Q Consensus 100 ~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG~~~ 174 (454)
+..+...|.+.+.+.++. ++.++.|+++...++. -.-|.+.+..++....+.+|.||+|||.++
T Consensus 157 G~~l~~~L~~~a~~~gv~--i~~~~~v~~L~~~~g~---------v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 220 (660)
T 2bs2_A 157 GHTMLFAVANECLKLGVS--IQDRKEAIALIHQDGK---------CYGAVVRDLVTGDIIAYVAKGTLIATGGYG 220 (660)
T ss_dssp HHHHHHHHHHHHHHHTCE--EECSEEEEEEEEETTE---------EEEEEEEETTTCCEEEEECSEEEECCCCCG
T ss_pred HHHHHHHHHHHHHhCCCE--EEECcEEEEEEecCCE---------EEEEEEEECCCCcEEEEEcCEEEEccCcch
Confidence 457888888888888887 9999999999764321 223444432234455789999999999765
No 167
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.68 E-value=6.7e-08 Score=98.92 Aligned_cols=61 Identities=21% Similarity=0.133 Sum_probs=46.5
Q ss_pred CCHHHHHHHHHHHHHHh-CCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccCCCC
Q 044575 98 PGHKELWLYLKDFCQRF-GLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATGHYS 174 (454)
Q Consensus 98 ~~~~~~~~yl~~~~~~~-~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG~~~ 174 (454)
....++.++|.+.+++. ++. ++++ +|++|...+++. .+.|++.++. ++.+|.||+|+|..+
T Consensus 191 ~~~~~l~~~L~~~~~~~~Gv~--i~~~-~V~~i~~~~~g~--------~~~v~~~~G~-----~i~ad~vI~A~G~~S 252 (550)
T 2e4g_A 191 FDAHLVADFLRRFATEKLGVR--HVED-RVEHVQRDANGN--------IESVRTATGR-----VFDADLFVDCSGFRG 252 (550)
T ss_dssp ECHHHHHHHHHHHHHHHSCCE--EEEC-CEEEEEECTTSC--------EEEEEETTSC-----EEECSEEEECCGGGC
T ss_pred EcHHHHHHHHHHHHHhcCCcE--EEEC-eEeEEEEcCCCC--------EEEEEECCCC-----EEECCEEEECCCCch
Confidence 56778999999999998 887 8889 999998754321 2456665443 689999999999544
No 168
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.67 E-value=8.6e-08 Score=99.78 Aligned_cols=35 Identities=34% Similarity=0.456 Sum_probs=32.3
Q ss_pred CCcEEEECcChHHHHHHHHHH---H-cCCcEEEEeeCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELR---K-EGHRVVVLEQNHD 46 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~---~-~g~~v~vie~~~~ 46 (454)
.+||||||||+||++||..|+ + .|.+|+|+||.+.
T Consensus 22 ~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~ 60 (643)
T 1jnr_A 22 ETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAV 60 (643)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCT
T ss_pred cCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCC
Confidence 579999999999999999999 6 7999999999864
No 169
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.67 E-value=1.6e-07 Score=95.63 Aligned_cols=61 Identities=16% Similarity=0.142 Sum_probs=45.0
Q ss_pred CCHHHHHHHHHHHHHH-hCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccCCCC
Q 044575 98 PGHKELWLYLKDFCQR-FGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATGHYS 174 (454)
Q Consensus 98 ~~~~~~~~yl~~~~~~-~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG~~~ 174 (454)
..+..+.++|.+.+.+ .++. ++++ +|++++..+++. ...|++.++. ++.+|+||.|+|.++
T Consensus 172 ~~r~~l~~~L~~~a~~~~Gv~--i~~~-~v~~i~~~~~g~--------~~~v~~~~g~-----~i~ad~vV~AdG~~S 233 (526)
T 2pyx_A 172 LNAAKFSQLLTEHCTQKLGVT--HIRD-HVSQIINNQHGD--------IEKLITKQNG-----EISGQLFIDCTGAKS 233 (526)
T ss_dssp ECHHHHHHHHHHHHHHTSCCE--EEEC-CEEEEEECTTSC--------EEEEEESSSC-----EEECSEEEECSGGGC
T ss_pred EcHHHHHHHHHHHHHhcCCCE--EEEe-EEEEEEecCCCc--------EEEEEECCCC-----EEEcCEEEECCCcch
Confidence 4677889999999988 7887 8888 699998754321 2345554433 589999999999544
No 170
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.66 E-value=1.2e-07 Score=92.53 Aligned_cols=101 Identities=20% Similarity=0.174 Sum_probs=79.8
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKKG 91 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (454)
.++|+|||+|+.|+.+|..|++.|.+|+++|+.+.+...
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~----------------------------------------- 183 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPG----------------------------------------- 183 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT-----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhc-----------------------------------------
Confidence 578999999999999999999999999999997643100
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccC
Q 044575 92 RDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATG 171 (454)
Q Consensus 92 ~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG 171 (454)
....++.+.+.+..++.++. ++++++|.+++..++ .+.|++.++. ++.+|.||+|+|
T Consensus 184 ------~~~~~~~~~l~~~l~~~gv~--i~~~~~v~~i~~~~~----------~~~v~~~~g~-----~i~~d~vv~a~G 240 (384)
T 2v3a_A 184 ------LLHPAAAKAVQAGLEGLGVR--FHLGPVLASLKKAGE----------GLEAHLSDGE-----VIPCDLVVSAVG 240 (384)
T ss_dssp ------TSCHHHHHHHHHHHHTTTCE--EEESCCEEEEEEETT----------EEEEEETTSC-----EEEESEEEECSC
T ss_pred ------ccCHHHHHHHHHHHHHcCCE--EEeCCEEEEEEecCC----------EEEEEECCCC-----EEECCEEEECcC
Confidence 01156777888888888887 899999999986532 5667766543 789999999999
Q ss_pred CCCCCCC
Q 044575 172 HYSYPRL 178 (454)
Q Consensus 172 ~~~~p~~ 178 (454)
..|+.
T Consensus 241 --~~p~~ 245 (384)
T 2v3a_A 241 --LRPRT 245 (384)
T ss_dssp --EEECC
T ss_pred --CCcCH
Confidence 66665
No 171
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.66 E-value=7.5e-08 Score=96.25 Aligned_cols=102 Identities=23% Similarity=0.276 Sum_probs=77.4
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKKG 91 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (454)
.++|+|||||++|+.+|..|++.|.+|+++|+.+.+...
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~----------------------------------------- 209 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILPT----------------------------------------- 209 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT-----------------------------------------
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCccccc-----------------------------------------
Confidence 478999999999999999999999999999997643100
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccC
Q 044575 92 RDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATG 171 (454)
Q Consensus 92 ~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG 171 (454)
...++.+++.+..++.++. ++++++|.+++. + ...++..++ ...++.+|.||+|+|
T Consensus 210 -------~~~~~~~~l~~~l~~~gv~--i~~~~~v~~i~~-~-----------~v~v~~~~G---~~~~i~~D~vv~a~G 265 (458)
T 1lvl_A 210 -------YDSELTAPVAESLKKLGIA--LHLGHSVEGYEN-G-----------CLLANDGKG---GQLRLEADRVLVAVG 265 (458)
T ss_dssp -------SCHHHHHHHHHHHHHHTCE--EETTCEEEEEET-T-----------EEEEECSSS---CCCEECCSCEEECCC
T ss_pred -------cCHHHHHHHHHHHHHCCCE--EEECCEEEEEEe-C-----------CEEEEECCC---ceEEEECCEEEECcC
Confidence 0156777888888888988 999999999875 2 423331122 123689999999999
Q ss_pred CCCCCCCCC
Q 044575 172 HYSYPRLPS 180 (454)
Q Consensus 172 ~~~~p~~p~ 180 (454)
..|+.+.
T Consensus 266 --~~p~~~~ 272 (458)
T 1lvl_A 266 --RRPRTKG 272 (458)
T ss_dssp --EEECCSS
T ss_pred --CCcCCCC
Confidence 7787653
No 172
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.65 E-value=1.4e-08 Score=103.38 Aligned_cols=38 Identities=37% Similarity=0.559 Sum_probs=33.7
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcc
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQ 50 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~ 50 (454)
.+||+|||||++|++||..|++ |.+|+|+||.+..+|.
T Consensus 8 ~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~g~ 45 (540)
T 1chu_A 8 SCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTEGS 45 (540)
T ss_dssp ECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC--
T ss_pred CCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCCCC
Confidence 5799999999999999999999 9999999998876543
No 173
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.65 E-value=1.1e-07 Score=97.59 Aligned_cols=64 Identities=14% Similarity=0.015 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccCCCC
Q 044575 100 HKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATGHYS 174 (454)
Q Consensus 100 ~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG~~~ 174 (454)
...+...+.+.+.+.|.. +.++++|+++...++. -|.|++.+..++...++.+|.||+|+|.++
T Consensus 187 ~~~l~~~l~~~a~~~Ga~--i~~~t~V~~l~~~~~~---------v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws 250 (571)
T 2rgh_A 187 DARLVIDNIKKAAEDGAY--LVSKMKAVGFLYEGDQ---------IVGVKARDLLTDEVIEIKAKLVINTSGPWV 250 (571)
T ss_dssp HHHHHHHHHHHHHHTTCE--EESSEEEEEEEEETTE---------EEEEEEEETTTCCEEEEEBSCEEECCGGGH
T ss_pred hHHHHHHHHHHHHHcCCe--EEeccEEEEEEEeCCE---------EEEEEEEEcCCCCEEEEEcCEEEECCChhH
Confidence 345555566667778887 8899999999876432 467777653333445789999999999754
No 174
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.65 E-value=2.5e-07 Score=92.92 Aligned_cols=108 Identities=24% Similarity=0.281 Sum_probs=81.1
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKKG 91 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (454)
.++|+|||||+.|+.+|..|++.|.+|+++|+.+.+...
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~----------------------------------------- 216 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGV----------------------------------------- 216 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCS-----------------------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCc-----------------------------------------
Confidence 478999999999999999999999999999997643100
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccC
Q 044575 92 RDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATG 171 (454)
Q Consensus 92 ~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG 171 (454)
. -..++.+++.+..++.++. ++++++|.+++..++. ...+++.+...+...++.+|.||+|+|
T Consensus 217 ----~--~~~~~~~~l~~~l~~~Gv~--i~~~~~v~~i~~~~~~---------~~~v~~~~~~~~~~~~i~~D~vv~a~G 279 (474)
T 1zmd_A 217 ----G--IDMEISKNFQRILQKQGFK--FKLNTKVTGATKKSDG---------KIDVSIEAASGGKAEVITCDVLLVCIG 279 (474)
T ss_dssp ----S--CCHHHHHHHHHHHHHTTCE--EECSEEEEEEEECTTS---------CEEEEEEETTSCCCEEEEESEEEECSC
T ss_pred ----c--cCHHHHHHHHHHHHHCCCE--EEeCceEEEEEEcCCc---------eEEEEEEecCCCCceEEEcCEEEECcC
Confidence 0 0157778888888888988 9999999999875431 256665421111223689999999999
Q ss_pred CCCCCCCC
Q 044575 172 HYSYPRLP 179 (454)
Q Consensus 172 ~~~~p~~p 179 (454)
..|+..
T Consensus 280 --~~p~~~ 285 (474)
T 1zmd_A 280 --RRPFTK 285 (474)
T ss_dssp --EEECCT
T ss_pred --CCcCCC
Confidence 777764
No 175
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.64 E-value=2.3e-07 Score=93.84 Aligned_cols=103 Identities=14% Similarity=0.205 Sum_probs=80.8
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKKG 91 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (454)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+..
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~------------------------------------------ 213 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILR------------------------------------------ 213 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCT------------------------------------------
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCc------------------------------------------
Confidence 47899999999999999999999999999999764310
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccC
Q 044575 92 RDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATG 171 (454)
Q Consensus 92 ~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG 171 (454)
. -..++.+.+.+..++.++. ++++++|.+|+..+++ ...|++.++. . .+.+|.||+|+|
T Consensus 214 ----~--~d~~~~~~l~~~l~~~gv~--i~~~~~v~~i~~~~~~---------~~~v~~~~g~---~-~~~~D~vi~a~G 272 (500)
T 1onf_A 214 ----K--FDESVINVLENDMKKNNIN--IVTFADVVEIKKVSDK---------NLSIHLSDGR---I-YEHFDHVIYCVG 272 (500)
T ss_dssp ----T--SCHHHHHHHHHHHHHTTCE--EECSCCEEEEEESSTT---------CEEEEETTSC---E-EEEESEEEECCC
T ss_pred ----c--cchhhHHHHHHHHHhCCCE--EEECCEEEEEEEcCCc---------eEEEEECCCc---E-EEECCEEEECCC
Confidence 0 0156778888888888988 9999999999865432 4667666543 1 389999999999
Q ss_pred CCCCCCCC
Q 044575 172 HYSYPRLP 179 (454)
Q Consensus 172 ~~~~p~~p 179 (454)
..|+..
T Consensus 273 --~~p~~~ 278 (500)
T 1onf_A 273 --RSPDTE 278 (500)
T ss_dssp --BCCTTT
T ss_pred --CCcCCC
Confidence 777763
No 176
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.64 E-value=2.8e-07 Score=92.98 Aligned_cols=106 Identities=20% Similarity=0.208 Sum_probs=82.4
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKKG 91 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (454)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+...
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~----------------------------------------- 236 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILGG----------------------------------------- 236 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSSS-----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecccccccc-----------------------------------------
Confidence 478999999999999999999999999999987643100
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccC
Q 044575 92 RDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATG 171 (454)
Q Consensus 92 ~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG 171 (454)
...++.+.+.+..++.++. ++++++|.+++..++ ...+++.+..++...++.+|.||+|+|
T Consensus 237 -------~d~~~~~~l~~~l~~~gV~--v~~~~~v~~i~~~~~----------~~~v~~~~~~~g~~~~i~~D~Vi~a~G 297 (491)
T 3urh_A 237 -------MDGEVAKQLQRMLTKQGID--FKLGAKVTGAVKSGD----------GAKVTFEPVKGGEATTLDAEVVLIATG 297 (491)
T ss_dssp -------SCHHHHHHHHHHHHHTTCE--EECSEEEEEEEEETT----------EEEEEEEETTSCCCEEEEESEEEECCC
T ss_pred -------CCHHHHHHHHHHHHhCCCE--EEECCeEEEEEEeCC----------EEEEEEEecCCCceEEEEcCEEEEeeC
Confidence 0157778888888888888 899999999987643 556776653222234789999999999
Q ss_pred CCCCCCCC
Q 044575 172 HYSYPRLP 179 (454)
Q Consensus 172 ~~~~p~~p 179 (454)
..|+..
T Consensus 298 --~~p~~~ 303 (491)
T 3urh_A 298 --RKPSTD 303 (491)
T ss_dssp --CEECCT
T ss_pred --CccCCC
Confidence 677764
No 177
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.63 E-value=1.8e-07 Score=93.57 Aligned_cols=176 Identities=14% Similarity=0.116 Sum_probs=91.2
Q ss_pred CCcEEEECcChHHHHHHHHHHHc--CCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKE--GHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLK 89 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~--g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (454)
.++|+|||||.+|+.+|..|++. +.+|+++++++.+-.. . .+. .....+ .|...-.|..++....
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p~----~--~~~-~~~~~~------~p~~~~~~~~l~~~~~ 293 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKPA----D--DSP-FVNEVF------APKFTDLIYSREHAER 293 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCBC----C--CCH-HHHGGG------SHHHHHHHHHSCHHHH
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcCc----c--CCc-cchhcc------ChhHHHHHhcCCHHHH
Confidence 57899999999999999999998 8899999998743100 0 000 000000 0000000000000000
Q ss_pred ------CCCCCCCCCCHHHHHHHHHH-HHHH----hCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeE
Q 044575 90 ------KGRDVRRFPGHKELWLYLKD-FCQR----FGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKV 158 (454)
Q Consensus 90 ------~~~~~~~~~~~~~~~~yl~~-~~~~----~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 158 (454)
.......-...+.+.+.... |.++ .++. ++++++|++|+..++ .|.|++.+..++..
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~--i~~~~~v~~v~~~~~----------~~~v~~~~~~~g~~ 361 (463)
T 3s5w_A 294 ERLLREYHNTNYSVVDTDLIERIYGVFYRQKVSGIPRHA--FRCMTTVERATATAQ----------GIELALRDAGSGEL 361 (463)
T ss_dssp HHHHHHTGGGTSSCBCHHHHHHHHHHHHHHHHHCCCCSE--EETTEEEEEEEEETT----------EEEEEEEETTTCCE
T ss_pred HHHHHHhhccCCCcCCHHHHHHHHHHHHHHHhcCCCCeE--EEeCCEEEEEEecCC----------EEEEEEEEcCCCCe
Confidence 00000000011111111111 1111 3444 899999999987543 78898886544556
Q ss_pred EEEEeCEEEEccCCCCCCC--CCCCCCcCCccceeEEeecCCCCCC-CCCCeEEEEcCC
Q 044575 159 VEEVFDAVVVATGHYSYPR--LPSIKGMDKWKRKQMHSHIYRVPEP-FRNEVVVVVGNS 214 (454)
Q Consensus 159 ~~~~~d~vViAtG~~~~p~--~p~i~G~~~~~~~~~~~~~~~~~~~-~~~k~vvVVG~G 214 (454)
.++.+|.||+||| ..|+ .+.+.++....+.+.....++.... ....+|-++|..
T Consensus 362 ~~~~~D~Vv~AtG--~~p~~~~~~l~~l~~~~g~i~v~~~~~~~~~~~~~~~Ifa~G~~ 418 (463)
T 3s5w_A 362 SVETYDAVILATG--YERQLHRQLLEPLAEYLGDHEIGRDYRLQTDERCKVAIYAQGFS 418 (463)
T ss_dssp EEEEESEEEECCC--EECCC-CTTTGGGGGGBC--CCCTTSBCCBCTTBCSEEEESSCC
T ss_pred EEEECCEEEEeeC--CCCCCccchhHHHHHHhCCcccCcccccccCCCCCCeEEEcCCC
Confidence 6789999999999 6666 4444544332244444444443211 113568888863
No 178
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.62 E-value=1.1e-07 Score=94.74 Aligned_cols=104 Identities=28% Similarity=0.257 Sum_probs=79.0
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKK 90 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (454)
..++|+|||||++|+.+|..|++.|.+|+++|+.+.+...
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~---------------------------------------- 187 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGV---------------------------------------- 187 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT----------------------------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccc----------------------------------------
Confidence 4589999999999999999999999999999997643100
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEcc
Q 044575 91 GRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVAT 170 (454)
Q Consensus 91 ~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAt 170 (454)
+ ...++.+++.+.+++.++. ++++++|.+++.. +. .+.+.+ ++. ++.+|.||+|+
T Consensus 188 ------~-~~~~~~~~l~~~l~~~gv~--i~~~~~v~~i~~~-~~---------v~~v~~-~~~-----~i~~d~vi~a~ 242 (447)
T 1nhp_A 188 ------Y-LDKEFTDVLTEEMEANNIT--IATGETVERYEGD-GR---------VQKVVT-DKN-----AYDADLVVVAV 242 (447)
T ss_dssp ------T-CCHHHHHHHHHHHHTTTEE--EEESCCEEEEECS-SB---------CCEEEE-SSC-----EEECSEEEECS
T ss_pred ------c-CCHHHHHHHHHHHHhCCCE--EEcCCEEEEEEcc-Cc---------EEEEEE-CCC-----EEECCEEEECc
Confidence 0 0156778888888888887 8899999999754 21 234544 222 68999999999
Q ss_pred CCCCCCCCCCC
Q 044575 171 GHYSYPRLPSI 181 (454)
Q Consensus 171 G~~~~p~~p~i 181 (454)
| ..|+.+.+
T Consensus 243 G--~~p~~~~~ 251 (447)
T 1nhp_A 243 G--VRPNTAWL 251 (447)
T ss_dssp C--EEESCGGG
T ss_pred C--CCCChHHH
Confidence 9 77776533
No 179
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.62 E-value=5.3e-08 Score=98.80 Aligned_cols=62 Identities=26% Similarity=0.216 Sum_probs=46.6
Q ss_pred CCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccCCCCC
Q 044575 98 PGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATGHYSY 175 (454)
Q Consensus 98 ~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG~~~~ 175 (454)
..+..+.+.|.+.+.+.++. ++++ +|+++...+++. .+.|++.++. ++.+|.||.|+|.++.
T Consensus 170 ~~~~~l~~~L~~~a~~~gv~--~~~~-~v~~i~~~~~~~--------~~~v~~~~g~-----~~~ad~vV~A~G~~S~ 231 (511)
T 2weu_A 170 FDADEVARYLSEYAIARGVR--HVVD-DVQHVGQDERGW--------ISGVHTKQHG-----EISGDLFVDCTGFRGL 231 (511)
T ss_dssp ECHHHHHHHHHHHHHHTTCE--EEEC-CEEEEEECTTSC--------EEEEEESSSC-----EEECSEEEECCGGGCC
T ss_pred EcHHHHHHHHHHHHHHCCCE--EEEC-eEeEEEEcCCCC--------EEEEEECCCC-----EEEcCEEEECCCcchH
Confidence 46788999999999888877 8888 999998754321 2556665543 6899999999996443
No 180
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.62 E-value=4.5e-08 Score=96.27 Aligned_cols=36 Identities=31% Similarity=0.431 Sum_probs=32.9
Q ss_pred CCcEEEECcChHHHHHHHHHHHc--CCcEEEEeeCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKE--GHRVVVLEQNHDV 47 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~--g~~v~vie~~~~~ 47 (454)
.+||+|||||++|+++|..|++. |.+|+|||+....
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~ 73 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLP 73 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSS
T ss_pred cCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCC
Confidence 47999999999999999999999 9999999997543
No 181
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.60 E-value=2.3e-07 Score=93.12 Aligned_cols=106 Identities=21% Similarity=0.230 Sum_probs=80.8
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKKG 91 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (454)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+..
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~------------------------------------------ 214 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVP------------------------------------------ 214 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSST------------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc------------------------------------------
Confidence 47899999999999999999999999999999764310
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccC
Q 044575 92 RDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATG 171 (454)
Q Consensus 92 ~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG 171 (454)
. ...++.+++.+..++.++. ++++++|.+|+..++ ...+++.+..++...++.+|.||+|+|
T Consensus 215 ----~--~~~~~~~~l~~~l~~~gv~--i~~~~~v~~i~~~~~----------~~~v~~~~~~~g~~~~~~~D~vv~a~G 276 (470)
T 1dxl_A 215 ----T--MDAEIRKQFQRSLEKQGMK--FKLKTKVVGVDTSGD----------GVKLTVEPSAGGEQTIIEADVVLVSAG 276 (470)
T ss_dssp ----T--SCHHHHHHHHHHHHHSSCC--EECSEEEEEEECSSS----------SEEEEEEESSSCCCEEEEESEEECCCC
T ss_pred ----c--ccHHHHHHHHHHHHHcCCE--EEeCCEEEEEEEcCC----------eEEEEEEecCCCcceEEECCEEEECCC
Confidence 0 1157778888888888988 999999999986432 455665531112223689999999999
Q ss_pred CCCCCCCC
Q 044575 172 HYSYPRLP 179 (454)
Q Consensus 172 ~~~~p~~p 179 (454)
..|+..
T Consensus 277 --~~p~~~ 282 (470)
T 1dxl_A 277 --RTPFTS 282 (470)
T ss_dssp --EEECCT
T ss_pred --CCcCCC
Confidence 677654
No 182
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.59 E-value=2.2e-07 Score=93.60 Aligned_cols=102 Identities=21% Similarity=0.178 Sum_probs=81.0
Q ss_pred CCcEEEECcChHHHHHHHHHHHc---CCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKE---GHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVL 88 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~---g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (454)
.++++|||||+.|+.+|..|++. |.+|+++++.+.+..
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~--------------------------------------- 227 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILR--------------------------------------- 227 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSST---------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCccc---------------------------------------
Confidence 47899999999999999999999 999999999764310
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEE
Q 044575 89 KKGRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVV 168 (454)
Q Consensus 89 ~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVi 168 (454)
. -..++.+.+.+.+++.++. ++++++|.+|+..+++ ...|++.++. ++.+|.||+
T Consensus 228 -------~--~d~~~~~~l~~~l~~~GV~--i~~~~~v~~i~~~~~~---------~~~v~~~~G~-----~i~~D~vv~ 282 (490)
T 1fec_A 228 -------G--FDSELRKQLTEQLRANGIN--VRTHENPAKVTKNADG---------TRHVVFESGA-----EADYDVVML 282 (490)
T ss_dssp -------T--SCHHHHHHHHHHHHHTTEE--EEETCCEEEEEECTTS---------CEEEEETTSC-----EEEESEEEE
T ss_pred -------c--cCHHHHHHHHHHHHhCCCE--EEeCCEEEEEEEcCCC---------EEEEEECCCc-----EEEcCEEEE
Confidence 0 0156778888888888887 8999999999875432 4667766543 689999999
Q ss_pred ccCCCCCCCCC
Q 044575 169 ATGHYSYPRLP 179 (454)
Q Consensus 169 AtG~~~~p~~p 179 (454)
|+| ..|+..
T Consensus 283 a~G--~~p~~~ 291 (490)
T 1fec_A 283 AIG--RVPRSQ 291 (490)
T ss_dssp CSC--EEESCT
T ss_pred ccC--CCcCcc
Confidence 999 677764
No 183
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.59 E-value=2.7e-07 Score=93.10 Aligned_cols=102 Identities=20% Similarity=0.153 Sum_probs=80.9
Q ss_pred CCcEEEECcChHHHHHHHHHHHc---CCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKE---GHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVL 88 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~---g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (454)
.++|+|||||+.|+.+|..|++. |.+|+++++.+.+..
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~--------------------------------------- 231 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILR--------------------------------------- 231 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCT---------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCcccc---------------------------------------
Confidence 46899999999999999999999 999999999764310
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEE
Q 044575 89 KKGRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVV 168 (454)
Q Consensus 89 ~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVi 168 (454)
. -..++.+.+.+.+++.++. ++++++|.+|+..+++ ...|++.++. ++.+|.||+
T Consensus 232 -------~--~d~~~~~~l~~~l~~~GV~--i~~~~~v~~i~~~~~~---------~~~v~~~~G~-----~i~~D~vv~ 286 (495)
T 2wpf_A 232 -------G--FDETIREEVTKQLTANGIE--IMTNENPAKVSLNTDG---------SKHVTFESGK-----TLDVDVVMM 286 (495)
T ss_dssp -------T--SCHHHHHHHHHHHHHTTCE--EEESCCEEEEEECTTS---------CEEEEETTSC-----EEEESEEEE
T ss_pred -------c--cCHHHHHHHHHHHHhCCCE--EEeCCEEEEEEEcCCc---------eEEEEECCCc-----EEEcCEEEE
Confidence 0 0156778888888888988 9999999999865432 4667766543 789999999
Q ss_pred ccCCCCCCCCC
Q 044575 169 ATGHYSYPRLP 179 (454)
Q Consensus 169 AtG~~~~p~~p 179 (454)
|+| ..|+..
T Consensus 287 a~G--~~p~~~ 295 (495)
T 2wpf_A 287 AIG--RIPRTN 295 (495)
T ss_dssp CSC--EEECCG
T ss_pred CCC--Cccccc
Confidence 999 677753
No 184
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.57 E-value=3.9e-07 Score=89.81 Aligned_cols=102 Identities=25% Similarity=0.254 Sum_probs=81.4
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKKG 91 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (454)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+...
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~----------------------------------------- 190 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLAR----------------------------------------- 190 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT-----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhh-----------------------------------------
Confidence 578999999999999999999999999999997643100
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccC
Q 044575 92 RDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATG 171 (454)
Q Consensus 92 ~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG 171 (454)
....++.+++.+..++.++. ++++++|.++...+.. ...|++.++. ++.+|.||+|+|
T Consensus 191 ------~~~~~~~~~l~~~l~~~GV~--i~~~~~v~~i~~~~~~---------v~~v~l~dG~-----~i~aD~Vv~a~G 248 (415)
T 3lxd_A 191 ------VAGEALSEFYQAEHRAHGVD--LRTGAAMDCIEGDGTK---------VTGVRMQDGS-----VIPADIVIVGIG 248 (415)
T ss_dssp ------TSCHHHHHHHHHHHHHTTCE--EEETCCEEEEEESSSB---------EEEEEESSSC-----EEECSEEEECSC
T ss_pred ------hcCHHHHHHHHHHHHhCCCE--EEECCEEEEEEecCCc---------EEEEEeCCCC-----EEEcCEEEECCC
Confidence 01267888888888989988 9999999999875432 3357776654 789999999999
Q ss_pred CCCCCCC
Q 044575 172 HYSYPRL 178 (454)
Q Consensus 172 ~~~~p~~ 178 (454)
..|+.
T Consensus 249 --~~p~~ 253 (415)
T 3lxd_A 249 --IVPCV 253 (415)
T ss_dssp --CEESC
T ss_pred --CccCh
Confidence 67765
No 185
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.56 E-value=4.5e-07 Score=90.84 Aligned_cols=105 Identities=19% Similarity=0.134 Sum_probs=79.9
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKKG 91 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (454)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+...
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~----------------------------------------- 212 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAPT----------------------------------------- 212 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-----------------------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCccccc-----------------------------------------
Confidence 478999999999999999999999999999997643100
Q ss_pred CCCCCCCCHHHHHHHHHHHH-HHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEcc
Q 044575 92 RDVRRFPGHKELWLYLKDFC-QRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVAT 170 (454)
Q Consensus 92 ~~~~~~~~~~~~~~yl~~~~-~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAt 170 (454)
...++.+++.+.. ++.++. ++++++|.+|+..++ ...+++...+ +...++.+|.||+|+
T Consensus 213 -------~d~~~~~~l~~~l~~~~gv~--i~~~~~v~~i~~~~~----------~~~v~~~~~~-g~~~~i~~D~vv~a~ 272 (468)
T 2qae_A 213 -------LDEDVTNALVGALAKNEKMK--FMTSTKVVGGTNNGD----------SVSLEVEGKN-GKRETVTCEALLVSV 272 (468)
T ss_dssp -------SCHHHHHHHHHHHHHHTCCE--EECSCEEEEEEECSS----------SEEEEEECC----EEEEEESEEEECS
T ss_pred -------CCHHHHHHHHHHHhhcCCcE--EEeCCEEEEEEEcCC----------eEEEEEEcCC-CceEEEECCEEEECC
Confidence 0156778888888 888988 999999999987532 4556655211 223478999999999
Q ss_pred CCCCCCCCC
Q 044575 171 GHYSYPRLP 179 (454)
Q Consensus 171 G~~~~p~~p 179 (454)
| ..|+..
T Consensus 273 G--~~p~~~ 279 (468)
T 2qae_A 273 G--RRPFTG 279 (468)
T ss_dssp C--EEECCT
T ss_pred C--cccCCC
Confidence 9 777764
No 186
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.56 E-value=4.6e-07 Score=90.68 Aligned_cols=104 Identities=19% Similarity=0.213 Sum_probs=80.3
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKKG 91 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (454)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+..
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~------------------------------------------ 208 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALP------------------------------------------ 208 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST------------------------------------------
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCcccc------------------------------------------
Confidence 47899999999999999999999999999999764310
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccC
Q 044575 92 RDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATG 171 (454)
Q Consensus 92 ~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG 171 (454)
. ...++.+++.+..++.++. ++++++|.+++..++ ...+++.+. +...++.+|.||+|+|
T Consensus 209 ----~--~~~~~~~~l~~~l~~~gv~--i~~~~~v~~i~~~~~----------~~~v~~~~~--g~~~~~~~D~vv~a~G 268 (464)
T 2a8x_A 209 ----N--EDADVSKEIEKQFKKLGVT--ILTATKVESIADGGS----------QVTVTVTKD--GVAQELKAEKVLQAIG 268 (464)
T ss_dssp ----T--SCHHHHHHHHHHHHHHTCE--EECSCEEEEEEECSS----------CEEEEEESS--SCEEEEEESEEEECSC
T ss_pred ----c--cCHHHHHHHHHHHHHcCCE--EEeCcEEEEEEEcCC----------eEEEEEEcC--CceEEEEcCEEEECCC
Confidence 0 1157778888888888988 999999999986532 345555411 2234789999999999
Q ss_pred CCCCCCCC
Q 044575 172 HYSYPRLP 179 (454)
Q Consensus 172 ~~~~p~~p 179 (454)
..|+..
T Consensus 269 --~~p~~~ 274 (464)
T 2a8x_A 269 --FAPNVE 274 (464)
T ss_dssp --EEECCS
T ss_pred --CCccCC
Confidence 777764
No 187
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.55 E-value=3.9e-07 Score=91.17 Aligned_cols=102 Identities=24% Similarity=0.203 Sum_probs=79.1
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKKG 91 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (454)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+..
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~------------------------------------------ 203 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLF------------------------------------------ 203 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST------------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcccc------------------------------------------
Confidence 46899999999999999999999999999998764310
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccC
Q 044575 92 RDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATG 171 (454)
Q Consensus 92 ~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG 171 (454)
. -..++.+.+.+..++.++. ++++++|.+|+..++ ...|++.++ .. ++.+|.||+|+|
T Consensus 204 ----~--~~~~~~~~l~~~l~~~gv~--i~~~~~v~~i~~~~~----------~~~v~~~~G---~~-~i~~D~vv~a~G 261 (463)
T 2r9z_A 204 ----Q--FDPLLSATLAENMHAQGIE--THLEFAVAALERDAQ----------GTTLVAQDG---TR-LEGFDSVIWAVG 261 (463)
T ss_dssp ----T--SCHHHHHHHHHHHHHTTCE--EESSCCEEEEEEETT----------EEEEEETTC---CE-EEEESEEEECSC
T ss_pred ----c--cCHHHHHHHHHHHHHCCCE--EEeCCEEEEEEEeCC----------eEEEEEeCC---cE-EEEcCEEEECCC
Confidence 0 0146677788888888888 999999999986532 455666543 22 589999999999
Q ss_pred CCCCCCCC
Q 044575 172 HYSYPRLP 179 (454)
Q Consensus 172 ~~~~p~~p 179 (454)
..|+..
T Consensus 262 --~~p~~~ 267 (463)
T 2r9z_A 262 --RAPNTR 267 (463)
T ss_dssp --EEESCT
T ss_pred --CCcCCC
Confidence 777764
No 188
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.55 E-value=3.4e-07 Score=91.98 Aligned_cols=103 Identities=17% Similarity=0.189 Sum_probs=79.2
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKKG 91 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (454)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+..
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~------------------------------------------ 222 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLR------------------------------------------ 222 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCT------------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCcccc------------------------------------------
Confidence 47899999999999999999999999999999764310
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccC
Q 044575 92 RDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATG 171 (454)
Q Consensus 92 ~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG 171 (454)
. -..++.+.+.+..++.++. ++++++|.+|+..+++. ...|++.++ . .++.+|.||+|+|
T Consensus 223 ----~--~d~~~~~~l~~~l~~~Gv~--i~~~~~v~~i~~~~~~~--------~~~v~~~~G---~-~~i~~D~vv~a~G 282 (479)
T 2hqm_A 223 ----K--FDECIQNTITDHYVKEGIN--VHKLSKIVKVEKNVETD--------KLKIHMNDS---K-SIDDVDELIWTIG 282 (479)
T ss_dssp ----T--SCHHHHHHHHHHHHHHTCE--EECSCCEEEEEECC-CC--------CEEEEETTS---C-EEEEESEEEECSC
T ss_pred ----c--cCHHHHHHHHHHHHhCCeE--EEeCCEEEEEEEcCCCc--------EEEEEECCC---c-EEEEcCEEEECCC
Confidence 0 0156777888888888988 99999999998653210 245666543 1 2789999999999
Q ss_pred CCCCCCC
Q 044575 172 HYSYPRL 178 (454)
Q Consensus 172 ~~~~p~~ 178 (454)
..|+.
T Consensus 283 --~~p~~ 287 (479)
T 2hqm_A 283 --RKSHL 287 (479)
T ss_dssp --EEECC
T ss_pred --CCCcc
Confidence 77776
No 189
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.54 E-value=3.8e-07 Score=89.58 Aligned_cols=103 Identities=28% Similarity=0.298 Sum_probs=80.9
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKK 90 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (454)
..++|+|||+|+.|+.+|..|++.|.+|+++++.+.+...
T Consensus 141 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~---------------------------------------- 180 (404)
T 3fg2_P 141 DKKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMAR---------------------------------------- 180 (404)
T ss_dssp GCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTT----------------------------------------
T ss_pred cCCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhh----------------------------------------
Confidence 3578999999999999999999999999999987643100
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEcc
Q 044575 91 GRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVAT 170 (454)
Q Consensus 91 ~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAt 170 (454)
....++.+++.+..++.++. ++++++|.++...++. ...|++.++. ++.+|.||+|+
T Consensus 181 -------~~~~~~~~~l~~~l~~~GV~--i~~~~~v~~i~~~~~~---------v~~V~~~dG~-----~i~aD~Vv~a~ 237 (404)
T 3fg2_P 181 -------VVTPEISSYFHDRHSGAGIR--MHYGVRATEIAAEGDR---------VTGVVLSDGN-----TLPCDLVVVGV 237 (404)
T ss_dssp -------TSCHHHHHHHHHHHHHTTCE--EECSCCEEEEEEETTE---------EEEEEETTSC-----EEECSEEEECC
T ss_pred -------ccCHHHHHHHHHHHHhCCcE--EEECCEEEEEEecCCc---------EEEEEeCCCC-----EEEcCEEEECc
Confidence 01257788888888888988 8999999999865422 3346666654 78999999999
Q ss_pred CCCCCCCC
Q 044575 171 GHYSYPRL 178 (454)
Q Consensus 171 G~~~~p~~ 178 (454)
| ..|+.
T Consensus 238 G--~~p~~ 243 (404)
T 3fg2_P 238 G--VIPNV 243 (404)
T ss_dssp C--EEECC
T ss_pred C--CccCH
Confidence 9 67765
No 190
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.54 E-value=2.1e-07 Score=93.70 Aligned_cols=104 Identities=21% Similarity=0.170 Sum_probs=78.8
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKKG 91 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (454)
.++|+|||||+.|+.+|..|++.|.+|+++|+.+.+..
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~------------------------------------------ 222 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQ------------------------------------------ 222 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSST------------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccc------------------------------------------
Confidence 47899999999999999999999999999999764310
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEee-cCCCeEEEEEeCEEEEcc
Q 044575 92 RDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKE-KKADKVVEEVFDAVVVAT 170 (454)
Q Consensus 92 ~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~d~vViAt 170 (454)
. ...++.+++.+..++.++. ++++++|.+++..++ ...|++.+ .+.+ .++.+|.||+|+
T Consensus 223 ----~--~~~~~~~~l~~~l~~~gV~--i~~~~~v~~i~~~~~----------~~~v~~~~~~~~g--~~~~~D~vv~a~ 282 (482)
T 1ojt_A 223 ----G--ADRDLVKVWQKQNEYRFDN--IMVNTKTVAVEPKED----------GVYVTFEGANAPK--EPQRYDAVLVAA 282 (482)
T ss_dssp ----T--SCHHHHHHHHHHHGGGEEE--EECSCEEEEEEEETT----------EEEEEEESSSCCS--SCEEESCEEECC
T ss_pred ----c--cCHHHHHHHHHHHHhcCCE--EEECCEEEEEEEcCC----------eEEEEEeccCCCc--eEEEcCEEEECc
Confidence 0 1156777888888877877 899999999986532 45566654 1001 157899999999
Q ss_pred CCCCCCCCC
Q 044575 171 GHYSYPRLP 179 (454)
Q Consensus 171 G~~~~p~~p 179 (454)
| ..|+..
T Consensus 283 G--~~p~~~ 289 (482)
T 1ojt_A 283 G--RAPNGK 289 (482)
T ss_dssp C--EEECGG
T ss_pred C--CCcCCC
Confidence 9 777753
No 191
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.54 E-value=7.4e-07 Score=89.82 Aligned_cols=105 Identities=23% Similarity=0.219 Sum_probs=78.2
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKKG 91 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (454)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+...
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~----------------------------------------- 212 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANL----------------------------------------- 212 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTC-----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc-----------------------------------------
Confidence 478999999999999999999999999999997743100
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccC
Q 044575 92 RDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATG 171 (454)
Q Consensus 92 ~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG 171 (454)
...++.+.+.+..++. +. ++++++|.+++..++ ...+++.+.+ +...++.+|.||+|+|
T Consensus 213 -------~d~~~~~~l~~~l~~~-V~--i~~~~~v~~i~~~~~----------~v~v~~~~~~-G~~~~i~~D~Vi~a~G 271 (492)
T 3ic9_A 213 -------QDEEMKRYAEKTFNEE-FY--FDAKARVISTIEKED----------AVEVIYFDKS-GQKTTESFQYVLAATG 271 (492)
T ss_dssp -------CCHHHHHHHHHHHHTT-SE--EETTCEEEEEEECSS----------SEEEEEECTT-CCEEEEEESEEEECSC
T ss_pred -------CCHHHHHHHHHHHhhC-cE--EEECCEEEEEEEcCC----------EEEEEEEeCC-CceEEEECCEEEEeeC
Confidence 0146667777766654 65 889999999987643 4456554211 3234789999999999
Q ss_pred CCCCCCCCC
Q 044575 172 HYSYPRLPS 180 (454)
Q Consensus 172 ~~~~p~~p~ 180 (454)
..|+...
T Consensus 272 --~~p~~~~ 278 (492)
T 3ic9_A 272 --RKANVDK 278 (492)
T ss_dssp --CEESCSS
T ss_pred --CccCCCC
Confidence 7777653
No 192
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.53 E-value=1.1e-06 Score=88.38 Aligned_cols=106 Identities=25% Similarity=0.207 Sum_probs=83.2
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKKG 91 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (454)
.++++|||+|+.|+.+|..|++.|.+|+++++.. +. +
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~l------------------------------------~------ 223 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSI-VL------------------------------------R------ 223 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC-SS------------------------------------T------
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCC-CC------------------------------------c------
Confidence 4689999999999999999999999999999742 10 0
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccC
Q 044575 92 RDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATG 171 (454)
Q Consensus 92 ~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG 171 (454)
. ...++.+.+.+..++.++. ++++++|.+++..+++ ...|++.++.++...++.+|.||+|+|
T Consensus 224 ----~--~d~~~~~~l~~~l~~~Gv~--i~~~~~v~~i~~~~~~---------~~~v~~~~~~~~~~~~~~~D~vi~a~G 286 (483)
T 3dgh_A 224 ----G--FDQQMAELVAASMEERGIP--FLRKTVPLSVEKQDDG---------KLLVKYKNVETGEESEDVYDTVLWAIG 286 (483)
T ss_dssp ----T--SCHHHHHHHHHHHHHTTCC--EEETEEEEEEEECTTS---------CEEEEEEETTTCCEEEEEESEEEECSC
T ss_pred ----c--cCHHHHHHHHHHHHhCCCE--EEeCCEEEEEEEcCCC---------cEEEEEecCCCCceeEEEcCEEEECcc
Confidence 0 0157778888888888988 9999999999875443 456777776444556789999999999
Q ss_pred CCCCCCCC
Q 044575 172 HYSYPRLP 179 (454)
Q Consensus 172 ~~~~p~~p 179 (454)
..|+..
T Consensus 287 --~~p~~~ 292 (483)
T 3dgh_A 287 --RKGLVD 292 (483)
T ss_dssp --EEECCG
T ss_pred --cccCcC
Confidence 677654
No 193
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.52 E-value=4.2e-07 Score=89.37 Aligned_cols=97 Identities=22% Similarity=0.263 Sum_probs=77.3
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKKG 91 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (454)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+...
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~----------------------------------------- 183 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSR----------------------------------------- 183 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT-----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccc-----------------------------------------
Confidence 578999999999999999999999999999997643100
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccC
Q 044575 92 RDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATG 171 (454)
Q Consensus 92 ~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG 171 (454)
....++.+++.+..++.++. ++++++|.+++ . . .|++.++. ++.+|.||+|+|
T Consensus 184 ------~~~~~~~~~l~~~l~~~GV~--i~~~~~v~~i~-~------------~-~v~~~~g~-----~i~~D~vi~a~G 236 (408)
T 2gqw_A 184 ------AAPATLADFVARYHAAQGVD--LRFERSVTGSV-D------------G-VVLLDDGT-----RIAADMVVVGIG 236 (408)
T ss_dssp ------TSCHHHHHHHHHHHHHTTCE--EEESCCEEEEE-T------------T-EEEETTSC-----EEECSEEEECSC
T ss_pred ------ccCHHHHHHHHHHHHHcCcE--EEeCCEEEEEE-C------------C-EEEECCCC-----EEEcCEEEECcC
Confidence 01156778888888888988 99999999987 2 3 46665543 789999999999
Q ss_pred CCCCCCC
Q 044575 172 HYSYPRL 178 (454)
Q Consensus 172 ~~~~p~~ 178 (454)
..|+.
T Consensus 237 --~~p~~ 241 (408)
T 2gqw_A 237 --VLAND 241 (408)
T ss_dssp --EEECC
T ss_pred --CCccH
Confidence 67764
No 194
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.52 E-value=3.3e-07 Score=90.21 Aligned_cols=102 Identities=19% Similarity=0.247 Sum_probs=80.7
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKK 90 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (454)
..++|+|||+|+.|+.+|..|++.|.+|+++++.+.+....
T Consensus 142 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~--------------------------------------- 182 (410)
T 3ef6_A 142 SATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLVRV--------------------------------------- 182 (410)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSHHH---------------------------------------
T ss_pred cCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccchhh---------------------------------------
Confidence 35789999999999999999999999999999976431000
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEcc
Q 044575 91 GRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVAT 170 (454)
Q Consensus 91 ~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAt 170 (454)
...++.+.+.+..++.++. ++++++|.+++..+ . ...|++.++. ++.+|.||+|+
T Consensus 183 --------~~~~~~~~l~~~l~~~GV~--i~~~~~v~~i~~~~-~---------~~~v~~~dg~-----~i~aD~Vv~a~ 237 (410)
T 3ef6_A 183 --------LGRRIGAWLRGLLTELGVQ--VELGTGVVGFSGEG-Q---------LEQVMASDGR-----SFVADSALICV 237 (410)
T ss_dssp --------HCHHHHHHHHHHHHHHTCE--EECSCCEEEEECSS-S---------CCEEEETTSC-----EEECSEEEECS
T ss_pred --------cCHHHHHHHHHHHHHCCCE--EEeCCEEEEEeccC-c---------EEEEEECCCC-----EEEcCEEEEee
Confidence 0156778888888888988 89999999997643 1 4567776654 78999999999
Q ss_pred CCCCCCCC
Q 044575 171 GHYSYPRL 178 (454)
Q Consensus 171 G~~~~p~~ 178 (454)
| ..|+.
T Consensus 238 G--~~p~~ 243 (410)
T 3ef6_A 238 G--AEPAD 243 (410)
T ss_dssp C--EEECC
T ss_pred C--CeecH
Confidence 9 67765
No 195
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.52 E-value=8.8e-08 Score=99.50 Aligned_cols=36 Identities=17% Similarity=0.213 Sum_probs=32.9
Q ss_pred CCcEEEECcChHHHHHHHHHHHc------CCcEEEEeeCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKE------GHRVVVLEQNHDV 47 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~------g~~v~vie~~~~~ 47 (454)
.+||||||||.||++||..|++. |.+|+|+||....
T Consensus 22 ~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~~ 63 (662)
T 3gyx_A 22 SVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASLE 63 (662)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCTT
T ss_pred EcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCCC
Confidence 48999999999999999999997 9999999997643
No 196
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.52 E-value=9.2e-07 Score=88.84 Aligned_cols=108 Identities=14% Similarity=0.077 Sum_probs=81.2
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKKG 91 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (454)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+. +
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l------------------------------------~------ 224 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVL------------------------------------R------ 224 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC------------------------------------T------
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccc------------------------------------c------
Confidence 4789999999999999999999999999999876431 0
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCe--EEEEEeCEEEEc
Q 044575 92 RDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADK--VVEEVFDAVVVA 169 (454)
Q Consensus 92 ~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~~~~d~vViA 169 (454)
. ...++.+++.+..++.++. ++++++|.+++..+++. ...+.+.+...+. ..++.+|.||+|
T Consensus 225 ----~--~d~~~~~~~~~~l~~~gv~--i~~~~~v~~i~~~~~~~--------~~~v~~~~~~~g~~~g~~~~~D~vi~a 288 (478)
T 3dk9_A 225 ----S--FDSMISTNCTEELENAGVE--VLKFSQVKEVKKTLSGL--------EVSMVTAVPGRLPVMTMIPDVDCLLWA 288 (478)
T ss_dssp ----T--SCHHHHHHHHHHHHHTTCE--EETTEEEEEEEECSSSE--------EEEEEECCTTSCCEEEEEEEESEEEEC
T ss_pred ----c--cCHHHHHHHHHHHHHCCCE--EEeCCEEEEEEEcCCCc--------EEEEEEccCCCCcccceEEEcCEEEEe
Confidence 0 1156778888888888988 89999999998754320 2445555432122 257899999999
Q ss_pred cCCCCCCCCC
Q 044575 170 TGHYSYPRLP 179 (454)
Q Consensus 170 tG~~~~p~~p 179 (454)
+| ..|+..
T Consensus 289 ~G--~~p~~~ 296 (478)
T 3dk9_A 289 IG--RVPNTK 296 (478)
T ss_dssp SC--EEESCT
T ss_pred ec--cccCCC
Confidence 99 677664
No 197
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.52 E-value=5.4e-07 Score=91.07 Aligned_cols=101 Identities=19% Similarity=0.211 Sum_probs=79.7
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKKG 91 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (454)
.++++|||+|+.|+.+|..|++.|.+|+++++.+.+..
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~------------------------------------------ 219 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLP------------------------------------------ 219 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSC------------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcccc------------------------------------------
Confidence 47899999999999999999999999999999764310
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccC
Q 044575 92 RDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATG 171 (454)
Q Consensus 92 ~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG 171 (454)
. ...++.+.+.+.+++.++. ++++++|.+|+..++ ...|+..++. ++.+|.||+|+|
T Consensus 220 ----~--~d~~~~~~l~~~l~~~GV~--i~~~~~V~~i~~~~~----------~v~v~~~~g~-----~i~aD~Vv~a~G 276 (499)
T 1xdi_A 220 ----Y--EDADAALVLEESFAERGVR--LFKNARAASVTRTGA----------GVLVTMTDGR-----TVEGSHALMTIG 276 (499)
T ss_dssp ----C--SSHHHHHHHHHHHHHTTCE--EETTCCEEEEEECSS----------SEEEEETTSC-----EEEESEEEECCC
T ss_pred ----c--cCHHHHHHHHHHHHHCCCE--EEeCCEEEEEEEeCC----------EEEEEECCCc-----EEEcCEEEECCC
Confidence 0 1156778888888888988 999999999986532 4555544433 689999999999
Q ss_pred CCCCCCCC
Q 044575 172 HYSYPRLP 179 (454)
Q Consensus 172 ~~~~p~~p 179 (454)
..|+..
T Consensus 277 --~~p~~~ 282 (499)
T 1xdi_A 277 --SVPNTS 282 (499)
T ss_dssp --EEECCS
T ss_pred --CCcCCC
Confidence 677764
No 198
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.52 E-value=2.1e-07 Score=92.73 Aligned_cols=38 Identities=34% Similarity=0.448 Sum_probs=33.6
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcC-CcEEEEeeCCCCC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEG-HRVVVLEQNHDVG 48 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g-~~v~vie~~~~~G 48 (454)
..+||+|||||++|+++|.+|++.| .+|+|||++..+|
T Consensus 22 ~~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~~~~~ 60 (448)
T 3axb_A 22 PRFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAGHAPG 60 (448)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHCSCEEEEESSSSTT
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCcEEEEccCCCCC
Confidence 4589999999999999999999999 9999999944443
No 199
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.51 E-value=5.3e-07 Score=89.29 Aligned_cols=103 Identities=21% Similarity=0.210 Sum_probs=79.1
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKK 90 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (454)
..++|+|||+|+.|+.+|..|++.|.+|+++++.+.+...
T Consensus 148 ~~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~---------------------------------------- 187 (431)
T 1q1r_A 148 ADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLER---------------------------------------- 187 (431)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTT----------------------------------------
T ss_pred cCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccc----------------------------------------
Confidence 3578999999999999999999999999999987642100
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEE--cCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEE
Q 044575 91 GRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGM--LDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVV 168 (454)
Q Consensus 91 ~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVi 168 (454)
....++.+++.+..++.++. ++++++|.+++. .++. -..|++.++. ++.+|.||+
T Consensus 188 -------~~~~~~~~~l~~~l~~~GV~--i~~~~~v~~i~~~~~~~~---------v~~v~~~~G~-----~i~~D~Vv~ 244 (431)
T 1q1r_A 188 -------VTAPPVSAFYEHLHREAGVD--IRTGTQVCGFEMSTDQQK---------VTAVLCEDGT-----RLPADLVIA 244 (431)
T ss_dssp -------TSCHHHHHHHHHHHHHHTCE--EECSCCEEEEEECTTTCC---------EEEEEETTSC-----EEECSEEEE
T ss_pred -------hhhHHHHHHHHHHHHhCCeE--EEeCCEEEEEEeccCCCc---------EEEEEeCCCC-----EEEcCEEEE
Confidence 01156777888888888988 899999999986 3221 2356666543 789999999
Q ss_pred ccCCCCCCCC
Q 044575 169 ATGHYSYPRL 178 (454)
Q Consensus 169 AtG~~~~p~~ 178 (454)
|+| ..|+.
T Consensus 245 a~G--~~p~~ 252 (431)
T 1q1r_A 245 GIG--LIPNC 252 (431)
T ss_dssp CCC--EEECC
T ss_pred CCC--CCcCc
Confidence 999 66664
No 200
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.51 E-value=3e-07 Score=92.39 Aligned_cols=101 Identities=23% Similarity=0.303 Sum_probs=77.5
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKK 90 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (454)
..++|+|||||+.|+.+|..|++.|.+|+++++.+.+...
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~---------------------------------------- 224 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGTI---------------------------------------- 224 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTSS----------------------------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhhc----------------------------------------
Confidence 4589999999999999999999999999999987643110
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEcc
Q 044575 91 GRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVAT 170 (454)
Q Consensus 91 ~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAt 170 (454)
...++.+++.+.+++.++. ++++++|.+++..+ . .+.+.+. +. ++.+|.||+|+
T Consensus 225 --------~~~~~~~~l~~~l~~~Gv~--i~~~~~v~~i~~~~-~---------v~~v~~~-~~-----~i~~D~vi~a~ 278 (480)
T 3cgb_A 225 --------YDGDMAEYIYKEADKHHIE--ILTNENVKAFKGNE-R---------VEAVETD-KG-----TYKADLVLVSV 278 (480)
T ss_dssp --------SCHHHHHHHHHHHHHTTCE--EECSCCEEEEEESS-B---------EEEEEET-TE-----EEECSEEEECS
T ss_pred --------CCHHHHHHHHHHHHHcCcE--EEcCCEEEEEEcCC-c---------EEEEEEC-CC-----EEEcCEEEECc
Confidence 0156778888888888988 88999999998642 1 2334442 21 68999999999
Q ss_pred CCCCCCCCC
Q 044575 171 GHYSYPRLP 179 (454)
Q Consensus 171 G~~~~p~~p 179 (454)
| ..|+.+
T Consensus 279 G--~~p~~~ 285 (480)
T 3cgb_A 279 G--VKPNTD 285 (480)
T ss_dssp C--EEESCG
T ss_pred C--CCcChH
Confidence 9 666654
No 201
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.50 E-value=1.6e-06 Score=87.33 Aligned_cols=106 Identities=18% Similarity=0.177 Sum_probs=82.3
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKKG 91 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (454)
.++|+|||||+.|+.+|..|++.|.+|+++++...+
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l-------------------------------------------- 220 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGIGLDTTVMMRSIPL-------------------------------------------- 220 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSS--------------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCccc--------------------------------------------
Confidence 468999999999999999999999999999985310
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccC
Q 044575 92 RDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATG 171 (454)
Q Consensus 92 ~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG 171 (454)
+. -..++.+.+.+..++.++. +++++.|.+|...+++ ...|++.+..+++..++.+|.||+|+|
T Consensus 221 ---~~--~d~~~~~~l~~~l~~~gv~--~~~~~~v~~i~~~~~~---------~~~v~~~~~~~g~~~~~~~D~vi~a~G 284 (488)
T 3dgz_A 221 ---RG--FDQQMSSLVTEHMESHGTQ--FLKGCVPSHIKKLPTN---------QLQVTWEDHASGKEDTGTFDTVLWAIG 284 (488)
T ss_dssp ---TT--SCHHHHHHHHHHHHHTTCE--EEETEEEEEEEECTTS---------CEEEEEEETTTTEEEEEEESEEEECSC
T ss_pred ---cc--CCHHHHHHHHHHHHHCCCE--EEeCCEEEEEEEcCCC---------cEEEEEEeCCCCeeEEEECCEEEEccc
Confidence 00 0157778888888888988 8999999999875433 566777664334445688999999999
Q ss_pred CCCCCCCC
Q 044575 172 HYSYPRLP 179 (454)
Q Consensus 172 ~~~~p~~p 179 (454)
..|+..
T Consensus 285 --~~p~~~ 290 (488)
T 3dgz_A 285 --RVPETR 290 (488)
T ss_dssp --EEESCG
T ss_pred --CCcccC
Confidence 677654
No 202
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.50 E-value=6.6e-07 Score=89.75 Aligned_cols=101 Identities=20% Similarity=0.181 Sum_probs=80.2
Q ss_pred CCcEEEECcChHHHHHHHHHHHc-CCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKE-GHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKK 90 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~-g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (454)
.++|+|||+|+.|+.+|..|++. |.+|+++++.+.+...
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~---------------------------------------- 198 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPG---------------------------------------- 198 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTT----------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCccccc----------------------------------------
Confidence 47899999999999999999999 9999999987643100
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEcc
Q 044575 91 GRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVAT 170 (454)
Q Consensus 91 ~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAt 170 (454)
. ...++.+.+.+.+++.++. ++++++|.+|+..++ ..+|.+.++. ++.+|.||+|+
T Consensus 199 -----~--~~~~~~~~l~~~l~~~GV~--i~~~~~v~~i~~~~~----------~v~v~~~~g~-----~i~aD~Vv~a~ 254 (472)
T 3iwa_A 199 -----F--TSKSLSQMLRHDLEKNDVV--VHTGEKVVRLEGENG----------KVARVITDKR-----TLDADLVILAA 254 (472)
T ss_dssp -----T--SCHHHHHHHHHHHHHTTCE--EECSCCEEEEEESSS----------BEEEEEESSC-----EEECSEEEECS
T ss_pred -----c--cCHHHHHHHHHHHHhcCCE--EEeCCEEEEEEccCC----------eEEEEEeCCC-----EEEcCEEEECC
Confidence 0 1157778888888888988 899999999987432 5557776654 78999999999
Q ss_pred CCCCCCCC
Q 044575 171 GHYSYPRL 178 (454)
Q Consensus 171 G~~~~p~~ 178 (454)
| ..|+.
T Consensus 255 G--~~p~~ 260 (472)
T 3iwa_A 255 G--VSPNT 260 (472)
T ss_dssp C--EEECC
T ss_pred C--CCcCH
Confidence 9 66664
No 203
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.49 E-value=1e-06 Score=88.48 Aligned_cols=104 Identities=24% Similarity=0.272 Sum_probs=81.4
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKKG 91 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (454)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+..
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~------------------------------------------ 217 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLP------------------------------------------ 217 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST------------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCc------------------------------------------
Confidence 47899999999999999999999999999999764310
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccC
Q 044575 92 RDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATG 171 (454)
Q Consensus 92 ~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG 171 (454)
. ...++.+.+.+..++.++. ++++++|.+++..++ ...+++.+++ + ..++.+|.||+|+|
T Consensus 218 ----~--~~~~~~~~l~~~l~~~Gv~--v~~~~~v~~i~~~~~----------~~~v~~~~~~-g-~~~~~~D~vi~a~G 277 (476)
T 3lad_A 218 ----A--VDEQVAKEAQKILTKQGLK--ILLGARVTGTEVKNK----------QVTVKFVDAE-G-EKSQAFDKLIVAVG 277 (476)
T ss_dssp ----T--SCHHHHHHHHHHHHHTTEE--EEETCEEEEEEECSS----------CEEEEEESSS-E-EEEEEESEEEECSC
T ss_pred ----c--cCHHHHHHHHHHHHhCCCE--EEECCEEEEEEEcCC----------EEEEEEEeCC-C-cEEEECCEEEEeeC
Confidence 0 1156778888888888887 899999999987543 4556666543 2 34789999999999
Q ss_pred CCCCCCCC
Q 044575 172 HYSYPRLP 179 (454)
Q Consensus 172 ~~~~p~~p 179 (454)
..|+..
T Consensus 278 --~~p~~~ 283 (476)
T 3lad_A 278 --RRPVTT 283 (476)
T ss_dssp --EEECCT
T ss_pred --CcccCC
Confidence 677664
No 204
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.48 E-value=7.7e-07 Score=89.55 Aligned_cols=101 Identities=21% Similarity=0.250 Sum_probs=80.9
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKKG 91 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (454)
.++|+|||+|+.|+..|..|++.|.+|+++++.+.+..
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~------------------------------------------ 228 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLILR------------------------------------------ 228 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST------------------------------------------
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCcccc------------------------------------------
Confidence 57899999999999999999999999999998764310
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccC
Q 044575 92 RDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATG 171 (454)
Q Consensus 92 ~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG 171 (454)
. ...++.+.+.+.+++.++. ++++++|.+++..++ .+.|++.++. ++.+|.||+|+|
T Consensus 229 ----~--~~~~~~~~l~~~l~~~Gv~--i~~~~~V~~i~~~~~----------~v~v~~~~g~-----~i~aD~Vi~A~G 285 (484)
T 3o0h_A 229 ----N--FDYDLRQLLNDAMVAKGIS--IIYEATVSQVQSTEN----------CYNVVLTNGQ-----TICADRVMLATG 285 (484)
T ss_dssp ----T--SCHHHHHHHHHHHHHHTCE--EESSCCEEEEEECSS----------SEEEEETTSC-----EEEESEEEECCC
T ss_pred ----c--cCHHHHHHHHHHHHHCCCE--EEeCCEEEEEEeeCC----------EEEEEECCCc-----EEEcCEEEEeeC
Confidence 0 0156777888888888988 899999999987543 5677776554 789999999999
Q ss_pred CCCCCCCC
Q 044575 172 HYSYPRLP 179 (454)
Q Consensus 172 ~~~~p~~p 179 (454)
..|+..
T Consensus 286 --~~p~~~ 291 (484)
T 3o0h_A 286 --RVPNTT 291 (484)
T ss_dssp --EEECCT
T ss_pred --CCcCCC
Confidence 677655
No 205
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.48 E-value=1.1e-06 Score=87.56 Aligned_cols=103 Identities=25% Similarity=0.248 Sum_probs=79.5
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKK 90 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (454)
..++++|||+|+.|+.+|..|++.|.+|+++++.+.+...
T Consensus 146 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~---------------------------------------- 185 (452)
T 3oc4_A 146 NSQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPK---------------------------------------- 185 (452)
T ss_dssp TCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT----------------------------------------
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccccc----------------------------------------
Confidence 3578999999999999999999999999999997643100
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEcc
Q 044575 91 GRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVAT 170 (454)
Q Consensus 91 ~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAt 170 (454)
. -..++.+.+.+.+++.++. ++++++|.+++..++ +..|.+.+ + ++.+|.||+|+
T Consensus 186 -----~--~d~~~~~~l~~~l~~~GV~--i~~~~~v~~i~~~~~----------~v~v~~~~---g---~i~aD~Vv~A~ 240 (452)
T 3oc4_A 186 -----Y--FDKEMVAEVQKSLEKQAVI--FHFEETVLGIEETAN----------GIVLETSE---Q---EISCDSGIFAL 240 (452)
T ss_dssp -----T--CCHHHHHHHHHHHHTTTEE--EEETCCEEEEEECSS----------CEEEEESS---C---EEEESEEEECS
T ss_pred -----c--CCHHHHHHHHHHHHHcCCE--EEeCCEEEEEEccCC----------eEEEEECC---C---EEEeCEEEECc
Confidence 0 0157778888888888887 899999999986433 44555532 1 68999999999
Q ss_pred CCCCCCCCCC
Q 044575 171 GHYSYPRLPS 180 (454)
Q Consensus 171 G~~~~p~~p~ 180 (454)
| ..|+...
T Consensus 241 G--~~p~~~~ 248 (452)
T 3oc4_A 241 N--LHPQLAY 248 (452)
T ss_dssp C--CBCCCSS
T ss_pred C--CCCChHH
Confidence 9 7777653
No 206
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.48 E-value=8e-07 Score=93.92 Aligned_cols=40 Identities=50% Similarity=0.860 Sum_probs=37.3
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcc
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQ 50 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~ 50 (454)
..+||+|||||++|+++|..|++.|++|+|+|+++.+||.
T Consensus 335 ~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ggr 374 (776)
T 4gut_A 335 HNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGGR 374 (776)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTT
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceece
Confidence 3589999999999999999999999999999999999883
No 207
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.47 E-value=6.8e-07 Score=89.54 Aligned_cols=99 Identities=22% Similarity=0.269 Sum_probs=78.3
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKKG 91 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (454)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+. |
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l------------------------------------~------ 213 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFF------------------------------------R------ 213 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT------------------------------------T------
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccC------------------------------------C------
Confidence 4789999999999999999999999999999976430 0
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccC
Q 044575 92 RDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATG 171 (454)
Q Consensus 92 ~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG 171 (454)
...++.+.+.+.+++.++. ++++++|.+++..+. .+.|.+. +. ++.+|.||+|+|
T Consensus 214 -------~~~~~~~~l~~~l~~~Gv~--i~~~~~v~~i~~~~~----------~~~v~~~-~~-----~i~aD~Vv~a~G 268 (467)
T 1zk7_A 214 -------EDPAIGEAVTAAFRAEGIE--VLEHTQASQVAHMDG----------EFVLTTT-HG-----ELRADKLLVATG 268 (467)
T ss_dssp -------SCHHHHHHHHHHHHHTTCE--EETTCCEEEEEEETT----------EEEEEET-TE-----EEEESEEEECSC
T ss_pred -------CCHHHHHHHHHHHHhCCCE--EEcCCEEEEEEEeCC----------EEEEEEC-Cc-----EEEcCEEEECCC
Confidence 1156778888888888988 899999999986532 4556554 21 689999999999
Q ss_pred CCCCCCCC
Q 044575 172 HYSYPRLP 179 (454)
Q Consensus 172 ~~~~p~~p 179 (454)
..|+..
T Consensus 269 --~~p~~~ 274 (467)
T 1zk7_A 269 --RTPNTR 274 (467)
T ss_dssp --EEESCT
T ss_pred --CCcCCC
Confidence 667653
No 208
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.47 E-value=8.4e-08 Score=97.25 Aligned_cols=41 Identities=41% Similarity=0.614 Sum_probs=38.1
Q ss_pred CCcEEEECcChHHHHHHHHHHHc-CCcEEEEeeCCCCCcccc
Q 044575 12 SKNVCVIGAGPSGLVAARELRKE-GHRVVVLEQNHDVGGQWL 52 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~-g~~v~vie~~~~~GG~w~ 52 (454)
.+||+|||||++||+||..|++. |++|+|+|+++++||.+.
T Consensus 10 ~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~~ 51 (513)
T 4gde_A 10 SVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLAS 51 (513)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGGC
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCee
Confidence 48999999999999999999885 999999999999999765
No 209
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.47 E-value=7.9e-07 Score=91.29 Aligned_cols=109 Identities=18% Similarity=0.202 Sum_probs=79.3
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKKG 91 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (454)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+. +
T Consensus 151 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l------------------------------------~------ 188 (565)
T 3ntd_A 151 VEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVM------------------------------------T------ 188 (565)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSC------------------------------------T------
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccc------------------------------------h------
Confidence 4689999999999999999999999999999976431 0
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCcc----------ccCCcCCcEEEEEeecCCCeEEEE
Q 044575 92 RDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGEL----------IIGNDLIKWVVKSKEKKADKVVEE 161 (454)
Q Consensus 92 ~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~----------~~~~~~~~~~v~~~~~~~~~~~~~ 161 (454)
....++.+.+.+..++.++. ++++++|.+++....... .....+ ...+...++. ++
T Consensus 189 ------~~~~~~~~~l~~~l~~~GV~--i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~g~-----~i 254 (565)
T 3ntd_A 189 ------PVDREMAGFAHQAIRDQGVD--LRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKG-HLSLTLSNGE-----LL 254 (565)
T ss_dssp ------TSCHHHHHHHHHHHHHTTCE--EEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTC-EEEEEETTSC-----EE
T ss_pred ------hcCHHHHHHHHHHHHHCCCE--EEeCCeEEEEeccccccccccccccccccccCCC-cEEEEEcCCC-----EE
Confidence 01157778888888888988 899999999986310000 000011 4556655443 78
Q ss_pred EeCEEEEccCCCCCCCC
Q 044575 162 VFDAVVVATGHYSYPRL 178 (454)
Q Consensus 162 ~~d~vViAtG~~~~p~~ 178 (454)
.+|.||+|+| ..|+.
T Consensus 255 ~~D~vi~a~G--~~p~~ 269 (565)
T 3ntd_A 255 ETDLLIMAIG--VRPET 269 (565)
T ss_dssp EESEEEECSC--EEECC
T ss_pred EcCEEEECcC--Cccch
Confidence 9999999999 67764
No 210
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.47 E-value=7.4e-07 Score=84.28 Aligned_cols=106 Identities=21% Similarity=0.225 Sum_probs=77.3
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKK 90 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (454)
..++|+|||+|+.|+.+|..|++.|.+|+++++.+.+
T Consensus 144 ~~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~------------------------------------------- 180 (320)
T 1trb_A 144 RNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGF------------------------------------------- 180 (320)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC-------------------------------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCcc-------------------------------------------
Confidence 3578999999999999999999999999999986532
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCC-CeEEEEEeCEEEEc
Q 044575 91 GRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKA-DKVVEEVFDAVVVA 169 (454)
Q Consensus 91 ~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~d~vViA 169 (454)
.....+.+.+.+.+++.++. +.++++|.+++..++. ...|++.+..+ +...++.+|.||+|
T Consensus 181 -------~~~~~~~~~l~~~l~~~gv~--i~~~~~v~~i~~~~~~---------v~~v~~~~~~~~g~~~~i~~D~vv~a 242 (320)
T 1trb_A 181 -------RAEKILIKRLMDKVENGNII--LHTNRTLEEVTGDQMG---------VTGVRLRDTQNSDNIESLDVAGLFVA 242 (320)
T ss_dssp -------CCCHHHHHHHHHHHHTSSEE--EECSCEEEEEEECSSS---------EEEEEEECCTTCCCCEEEECSEEEEC
T ss_pred -------ccCHHHHHHHHHhcccCCeE--EEcCceeEEEEcCCCc---------eEEEEEEeccCCCceEEEEcCEEEEE
Confidence 00144556666666667777 8889999999865422 33466654211 22347899999999
Q ss_pred cCCCCCCCCC
Q 044575 170 TGHYSYPRLP 179 (454)
Q Consensus 170 tG~~~~p~~p 179 (454)
+| ..|+..
T Consensus 243 ~G--~~p~~~ 250 (320)
T 1trb_A 243 IG--HSPNTA 250 (320)
T ss_dssp SC--EEESCG
T ss_pred eC--CCCChH
Confidence 99 666654
No 211
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.46 E-value=2.8e-07 Score=91.26 Aligned_cols=87 Identities=21% Similarity=0.323 Sum_probs=65.1
Q ss_pred CeEEEEcCCCCHHHHHHHHhhhc--CeEEEecccCCc--Ccc-----------------chhhhccCCCeEEcCceeEEe
Q 044575 206 EVVVVVGNSLSGQDISMELVEVA--KEVHLSAKSLNI--SEG-----------------LSKVISKHNNLHLHPQIDCLR 264 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~~~--~~V~l~~r~~~~--~~~-----------------~~~~l~~~~~i~~~~~v~~v~ 264 (454)
|+|||||+|+.|+.+|..|++.+ .+||++++++.. .+. +.+.+.+.+--+....+++|+
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~p~l~~v~~g~~~~~~i~~~~~~~~~~~gv~~i~~~v~~Id 82 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINEKAESID 82 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECSCEEEEE
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccCccHHHHhcCCCCHHHhhhcHHHHHHHCCcEEEEeEEEEEE
Confidence 78999999999999999999876 589999998753 111 122232222123455788887
Q ss_pred cCC-cEEEeCCCEEeeceEEEccCcccCC
Q 044575 265 EDG-RVTFVDGCWVTADTILYCTGYSYSF 292 (454)
Q Consensus 265 ~~~-~v~~~dG~~i~~D~vI~atG~~~~~ 292 (454)
.++ .|++++|+++++|.+|+|||.++.+
T Consensus 83 ~~~~~V~~~~g~~i~YD~LViAtG~~~~~ 111 (430)
T 3hyw_A 83 PDANTVTTQSGKKIEYDYLVIATGPKLVF 111 (430)
T ss_dssp TTTTEEEETTCCEEECSEEEECCCCEEEC
T ss_pred CCCCEEEECCCCEEECCEEEEeCCCCccC
Confidence 554 7889999999999999999987653
No 212
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.46 E-value=1.2e-07 Score=92.90 Aligned_cols=45 Identities=29% Similarity=0.472 Sum_probs=41.5
Q ss_pred ccCCCcEEEECcChHHHHHHHHHHHc-CCcEEEEeeCCCCCccccc
Q 044575 9 CAQSKNVCVIGAGPSGLVAARELRKE-GHRVVVLEQNHDVGGQWLY 53 (454)
Q Consensus 9 ~~~~~~VvIIGaG~aGl~aA~~l~~~-g~~v~vie~~~~~GG~w~~ 53 (454)
|...+||+|||||++|++||..|++. |.+|+|+|+++.+||.+..
T Consensus 4 m~~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~ 49 (399)
T 1v0j_A 4 MTARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYS 49 (399)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCE
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeee
Confidence 45568999999999999999999999 9999999999999999864
No 213
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.45 E-value=1e-06 Score=89.32 Aligned_cols=100 Identities=19% Similarity=0.179 Sum_probs=80.0
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKKG 91 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (454)
.++++|||||+.|+..|..+++.|.+|+|+++...+ |.
T Consensus 223 P~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L-------------------------------------~~----- 260 (542)
T 4b1b_A 223 PGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVL-------------------------------------RG----- 260 (542)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSS-------------------------------------TT-----
T ss_pred CceEEEECCCHHHHHHHHHHHhcCCeEEEecccccc-------------------------------------cc-----
Confidence 478999999999999999999999999999874311 00
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccC
Q 044575 92 RDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATG 171 (454)
Q Consensus 92 ~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG 171 (454)
..+++.+.+.+..++.++. +++++.|.++...++ ...|.+.++. ++.+|.|++|+|
T Consensus 261 -------~D~ei~~~l~~~l~~~gi~--~~~~~~v~~~~~~~~----------~~~v~~~~~~-----~~~~D~vLvAvG 316 (542)
T 4b1b_A 261 -------FDQQCAVKVKLYMEEQGVM--FKNGILPKKLTKMDD----------KILVEFSDKT-----SELYDTVLYAIG 316 (542)
T ss_dssp -------SCHHHHHHHHHHHHHTTCE--EEETCCEEEEEEETT----------EEEEEETTSC-----EEEESEEEECSC
T ss_pred -------cchhHHHHHHHHHHhhcce--eecceEEEEEEecCC----------eEEEEEcCCC-----eEEEEEEEEccc
Confidence 1167888889999998987 899999999987654 4556665544 678999999999
Q ss_pred CCCCCCCC
Q 044575 172 HYSYPRLP 179 (454)
Q Consensus 172 ~~~~p~~p 179 (454)
.+|+.-
T Consensus 317 --R~Pnt~ 322 (542)
T 4b1b_A 317 --RKGDID 322 (542)
T ss_dssp --EEESCG
T ss_pred --ccCCcc
Confidence 777764
No 214
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.45 E-value=4.6e-07 Score=89.89 Aligned_cols=97 Identities=18% Similarity=0.256 Sum_probs=75.8
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKKG 91 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (454)
.++|+|||||+.|+.+|..+++.|.+|+++++.+.+....
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~~---------------------------------------- 186 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLM---------------------------------------- 186 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTTS----------------------------------------
T ss_pred CcEEEEECCccchhhhHHHHHhcCCcceeeeeeccccccc----------------------------------------
Confidence 4689999999999999999999999999999976431000
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccC
Q 044575 92 RDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATG 171 (454)
Q Consensus 92 ~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG 171 (454)
..++.+.+.+..++.++. ++++++|.+++. ..+++.+++ ++.+|.|++|+|
T Consensus 187 --------d~~~~~~~~~~l~~~gV~--i~~~~~v~~~~~--------------~~v~~~~g~-----~~~~D~vl~a~G 237 (437)
T 4eqs_A 187 --------DADMNQPILDELDKREIP--YRLNEEINAING--------------NEITFKSGK-----VEHYDMIIEGVG 237 (437)
T ss_dssp --------CGGGGHHHHHHHHHTTCC--EEESCCEEEEET--------------TEEEETTSC-----EEECSEEEECCC
T ss_pred --------cchhHHHHHHHhhccceE--EEeccEEEEecC--------------CeeeecCCe-----EEeeeeEEEEec
Confidence 134556677777888888 999999988762 236666655 789999999999
Q ss_pred CCCCCCCC
Q 044575 172 HYSYPRLP 179 (454)
Q Consensus 172 ~~~~p~~p 179 (454)
..|+..
T Consensus 238 --~~Pn~~ 243 (437)
T 4eqs_A 238 --THPNSK 243 (437)
T ss_dssp --EEESCG
T ss_pred --eecCcH
Confidence 777653
No 215
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.45 E-value=7.8e-07 Score=89.65 Aligned_cols=102 Identities=23% Similarity=0.294 Sum_probs=77.4
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKK 90 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (454)
..++|+|||||+.|+.+|..|++.|.+|+++++.+.+...
T Consensus 193 ~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~---------------------------------------- 232 (490)
T 2bc0_A 193 DIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAG---------------------------------------- 232 (490)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT----------------------------------------
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhhh----------------------------------------
Confidence 3578999999999999999999999999999997643100
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEcc
Q 044575 91 GRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVAT 170 (454)
Q Consensus 91 ~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAt 170 (454)
. ...++.+.+.+..++.++. ++++++|.+|+.. +. ...|.+ ++. ++.+|.||+|+
T Consensus 233 -----~--~~~~~~~~l~~~l~~~GV~--i~~~~~v~~i~~~-~~---------v~~v~~-~g~-----~i~~D~Vi~a~ 287 (490)
T 2bc0_A 233 -----Y--YDRDLTDLMAKNMEEHGIQ--LAFGETVKEVAGN-GK---------VEKIIT-DKN-----EYDVDMVILAV 287 (490)
T ss_dssp -----T--SCHHHHHHHHHHHHTTTCE--EEETCCEEEEECS-SS---------CCEEEE-SSC-----EEECSEEEECC
T ss_pred -----H--HHHHHHHHHHHHHHhCCeE--EEeCCEEEEEEcC-Cc---------EEEEEE-CCc-----EEECCEEEECC
Confidence 0 1156778888888888888 9999999999752 11 122444 333 68999999999
Q ss_pred CCCCCCCCC
Q 044575 171 GHYSYPRLP 179 (454)
Q Consensus 171 G~~~~p~~p 179 (454)
| .+|+.+
T Consensus 288 G--~~p~~~ 294 (490)
T 2bc0_A 288 G--FRPNTT 294 (490)
T ss_dssp C--EEECCG
T ss_pred C--CCcChH
Confidence 9 777764
No 216
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.45 E-value=9e-07 Score=88.23 Aligned_cols=101 Identities=19% Similarity=0.213 Sum_probs=77.4
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKKG 91 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (454)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+...
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~----------------------------------------- 187 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYK----------------------------------------- 187 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTT-----------------------------------------
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhh-----------------------------------------
Confidence 578999999999999999999999999999987643100
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEE-EEEeecCCCeEEEEEeCEEEEcc
Q 044575 92 RDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWV-VKSKEKKADKVVEEVFDAVVVAT 170 (454)
Q Consensus 92 ~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~d~vViAt 170 (454)
. ...++.+.+.+..++.++. ++++++|.+++..++ +.. +.+ ++. ++.+|.||+|+
T Consensus 188 ----~--~~~~~~~~l~~~l~~~Gv~--i~~~~~v~~i~~~~~----------~v~~v~~-~g~-----~i~~D~vv~a~ 243 (452)
T 2cdu_A 188 ----Y--FDKEFTDILAKDYEAHGVN--LVLGSKVAAFEEVDD----------EIITKTL-DGK-----EIKSDIAILCI 243 (452)
T ss_dssp ----T--SCHHHHHHHHHHHHHTTCE--EEESSCEEEEEEETT----------EEEEEET-TSC-----EEEESEEEECC
T ss_pred ----h--hhhhHHHHHHHHHHHCCCE--EEcCCeeEEEEcCCC----------eEEEEEe-CCC-----EEECCEEEECc
Confidence 0 1156778888888888988 999999999986322 332 322 332 68999999999
Q ss_pred CCCCCCCCC
Q 044575 171 GHYSYPRLP 179 (454)
Q Consensus 171 G~~~~p~~p 179 (454)
| ..|+..
T Consensus 244 G--~~p~~~ 250 (452)
T 2cdu_A 244 G--FRPNTE 250 (452)
T ss_dssp C--EEECCG
T ss_pred C--CCCCHH
Confidence 9 777754
No 217
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.43 E-value=1.3e-06 Score=88.63 Aligned_cols=102 Identities=20% Similarity=0.220 Sum_probs=79.7
Q ss_pred CcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCCCC
Q 044575 13 KNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKKGR 92 (454)
Q Consensus 13 ~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (454)
++|+|||||+.|+.+|..|++.|.+|+++++.+.+..
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~------------------------------------------- 251 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKL------------------------------------------- 251 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT-------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCcccc-------------------------------------------
Confidence 7899999999999999999999999999999764310
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCc---EEEEEeecCCCeEEEEEeCEEEEc
Q 044575 93 DVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIK---WVVKSKEKKADKVVEEVFDAVVVA 169 (454)
Q Consensus 93 ~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~~~d~vViA 169 (454)
. ...++.+++.+.+++.++. ++++++|.+|+..+++ . +.|++.++ ..++.+|.||+|
T Consensus 252 ---~--~~~~~~~~l~~~l~~~GV~--i~~~~~V~~i~~~~~~---------~v~~~~v~~~~G----~~~i~aD~Vv~A 311 (523)
T 1mo9_A 252 ---I--KDNETRAYVLDRMKEQGME--IISGSNVTRIEEDANG---------RVQAVVAMTPNG----EMRIETDFVFLG 311 (523)
T ss_dssp ---C--CSHHHHHHHHHHHHHTTCE--EESSCEEEEEEECTTS---------BEEEEEEEETTE----EEEEECSCEEEC
T ss_pred ---c--ccHHHHHHHHHHHHhCCcE--EEECCEEEEEEEcCCC---------ceEEEEEEECCC----cEEEEcCEEEEC
Confidence 0 1157778888888888988 9999999999864332 2 55665432 126899999999
Q ss_pred cCCCCCCCCC
Q 044575 170 TGHYSYPRLP 179 (454)
Q Consensus 170 tG~~~~p~~p 179 (454)
+| ..|+..
T Consensus 312 ~G--~~p~~~ 319 (523)
T 1mo9_A 312 LG--EQPRSA 319 (523)
T ss_dssp CC--CEECCH
T ss_pred cC--CccCCc
Confidence 99 677653
No 218
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.43 E-value=1.5e-07 Score=90.79 Aligned_cols=44 Identities=41% Similarity=0.679 Sum_probs=40.7
Q ss_pred cCCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeC-CCCCccccc
Q 044575 10 AQSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQN-HDVGGQWLY 53 (454)
Q Consensus 10 ~~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~-~~~GG~w~~ 53 (454)
...++|+|||||++||+||..|.+.|++|+|+|++ +.+||.|..
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t 86 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKT 86 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCE
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceee
Confidence 44689999999999999999999999999999999 999998863
No 219
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.43 E-value=1e-07 Score=96.32 Aligned_cols=40 Identities=43% Similarity=0.565 Sum_probs=31.9
Q ss_pred CcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccc
Q 044575 13 KNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWL 52 (454)
Q Consensus 13 ~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~ 52 (454)
++|||||||++||+||..|++.|++|+|+|+++.+||...
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG~~~ 41 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGGRAY 41 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-------C
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCCcEE
Confidence 7899999999999999999999999999999999999754
No 220
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.41 E-value=7.9e-07 Score=88.24 Aligned_cols=89 Identities=19% Similarity=0.315 Sum_probs=68.3
Q ss_pred CeEEEEcCCCCHHHHHHHHhh---hcCeEEEecccCCc--Cc-----------------cchhhhccC-CCeEEcCceeE
Q 044575 206 EVVVVVGNSLSGQDISMELVE---VAKEVHLSAKSLNI--SE-----------------GLSKVISKH-NNLHLHPQIDC 262 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~---~~~~V~l~~r~~~~--~~-----------------~~~~~l~~~-~~i~~~~~v~~ 262 (454)
++|+|||||++|+.+|..|++ .+.+|+++++.+.. .+ .+.+.+.+. .++ ....++.
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~gv~~-~~~~v~~ 83 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKGIHF-IAQSAEQ 83 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHHHHTTTCEE-ECSCEEE
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHHHHHHCCCEE-EEeEEEE
Confidence 689999999999999999999 78899999998754 11 112223322 234 3568888
Q ss_pred EecCC-cEEEeCCCEEeeceEEEccCcccCCcCC
Q 044575 263 LREDG-RVTFVDGCWVTADTILYCTGYSYSFPFL 295 (454)
Q Consensus 263 v~~~~-~v~~~dG~~i~~D~vI~atG~~~~~~~l 295 (454)
++.++ .|.+.+|+++.+|.+|+|||.+|+.+-+
T Consensus 84 id~~~~~V~~~~g~~i~~d~lviAtG~~~~~~~i 117 (437)
T 3sx6_A 84 IDAEAQNITLADGNTVHYDYLMIATGPKLAFENV 117 (437)
T ss_dssp EETTTTEEEETTSCEEECSEEEECCCCEECGGGS
T ss_pred EEcCCCEEEECCCCEEECCEEEECCCCCcCcccC
Confidence 87553 6888899899999999999999876544
No 221
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.41 E-value=9.7e-07 Score=91.33 Aligned_cols=43 Identities=28% Similarity=0.407 Sum_probs=37.4
Q ss_pred ccCCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCccc
Q 044575 9 CAQSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQW 51 (454)
Q Consensus 9 ~~~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w 51 (454)
|...+||+|||||++|+++|..|++.|++|+|||+.+..||.+
T Consensus 43 ~~~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg~~ 85 (623)
T 3pl8_A 43 MDIKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGLK 85 (623)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSSS
T ss_pred ccccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCCcc
Confidence 4456899999999999999999999999999999998888754
No 222
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.41 E-value=2.1e-07 Score=92.91 Aligned_cols=45 Identities=20% Similarity=0.378 Sum_probs=41.5
Q ss_pred ccCCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCccccc
Q 044575 9 CAQSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLY 53 (454)
Q Consensus 9 ~~~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~ 53 (454)
|+..+||+|||||++|++||..|++.|++|+|+|+++.+||.+..
T Consensus 8 ~~~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t 52 (453)
T 2bcg_G 8 IDTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAAS 52 (453)
T ss_dssp CCCBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred ccccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc
Confidence 456689999999999999999999999999999999999998763
No 223
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.39 E-value=5.7e-07 Score=87.09 Aligned_cols=93 Identities=22% Similarity=0.235 Sum_probs=74.0
Q ss_pred CcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCCCC
Q 044575 13 KNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKKGR 92 (454)
Q Consensus 13 ~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (454)
++|+|||||+.|+.+|..|++.|.+|+++++.+.+..
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~------------------------------------------- 180 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG------------------------------------------- 180 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT-------------------------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc-------------------------------------------
Confidence 7899999999999999999999999999999764311
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccCC
Q 044575 93 DVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATGH 172 (454)
Q Consensus 93 ~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG~ 172 (454)
-..++.+++.+..++.++. +.++++|.+++. . .|++.++ ++.+|.||+|+|
T Consensus 181 ------~~~~~~~~l~~~l~~~gV~--i~~~~~v~~i~~-------------~-~v~~~~g------~i~~D~vi~a~G- 231 (367)
T 1xhc_A 181 ------LDEELSNMIKDMLEETGVK--FFLNSELLEANE-------------E-GVLTNSG------FIEGKVKICAIG- 231 (367)
T ss_dssp ------CCHHHHHHHHHHHHHTTEE--EECSCCEEEECS-------------S-EEEETTE------EEECSCEEEECC-
T ss_pred ------CCHHHHHHHHHHHHHCCCE--EEcCCEEEEEEe-------------e-EEEECCC------EEEcCEEEECcC-
Confidence 1157778888888888888 889999998861 1 2555432 288999999999
Q ss_pred CCCCCC
Q 044575 173 YSYPRL 178 (454)
Q Consensus 173 ~~~p~~ 178 (454)
..|+.
T Consensus 232 -~~p~~ 236 (367)
T 1xhc_A 232 -IVPNV 236 (367)
T ss_dssp -EEECC
T ss_pred -CCcCH
Confidence 77775
No 224
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.39 E-value=2.1e-07 Score=90.48 Aligned_cols=43 Identities=28% Similarity=0.557 Sum_probs=40.3
Q ss_pred cCCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccc
Q 044575 10 AQSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWL 52 (454)
Q Consensus 10 ~~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~ 52 (454)
...+||+|||||++|+++|..|++.|.+|+|+|+++.+||.|.
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~ 69 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAY 69 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGC
T ss_pred CCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCccc
Confidence 3468999999999999999999999999999999999999987
No 225
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.39 E-value=5.3e-07 Score=88.37 Aligned_cols=91 Identities=16% Similarity=0.119 Sum_probs=66.9
Q ss_pred CCCeEEEEcCCCCHHHHHHHHhhhc--CeEEEecccCCc--Ccc-----------------chhhhccCCCeEEcCceeE
Q 044575 204 RNEVVVVVGNSLSGQDISMELVEVA--KEVHLSAKSLNI--SEG-----------------LSKVISKHNNLHLHPQIDC 262 (454)
Q Consensus 204 ~~k~vvVVG~G~sg~e~A~~l~~~~--~~V~l~~r~~~~--~~~-----------------~~~~l~~~~~i~~~~~v~~ 262 (454)
.||+|||||+|+.|+-+|..|.+.+ .+|+++++++.. .+. +..+.....+ +....++.
T Consensus 1 aGKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~v~~g~~~~~~~~~~~~~~~~~gv~-~i~~~v~~ 79 (401)
T 3vrd_B 1 AGRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYMSNEVIGGDRELASLRVGYDGLRAHGIQ-VVHDSALG 79 (401)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTTHHHHHHTSSCGGGGEECSHHHHHTTCE-EECSCEEE
T ss_pred CcCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccCHHHHhcCCCCHHHHhhCHHHHHHCCCE-EEEeEEEE
Confidence 3799999999999999999998876 489999987753 111 1111111223 34567888
Q ss_pred EecCC-cEEEeCCCEEeeceEEEccCcccCCcCC
Q 044575 263 LREDG-RVTFVDGCWVTADTILYCTGYSYSFPFL 295 (454)
Q Consensus 263 v~~~~-~v~~~dG~~i~~D~vI~atG~~~~~~~l 295 (454)
++.+. .|++.+|+++++|.+|+|||.+++.+-+
T Consensus 80 id~~~~~v~~~~g~~i~yd~LviAtG~~~~~~~i 113 (401)
T 3vrd_B 80 IDPDKKLVKTAGGAEFAYDRCVVAPGIDLLYDKI 113 (401)
T ss_dssp EETTTTEEEETTSCEEECSEEEECCCEEECGGGS
T ss_pred EEccCcEEEecccceeecceeeeccCCccccCCc
Confidence 87554 6888899999999999999999875533
No 226
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.39 E-value=1.6e-06 Score=86.72 Aligned_cols=101 Identities=20% Similarity=0.250 Sum_probs=78.9
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKKG 91 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (454)
.++++|||+|+.|+.+|..+++.|.+|+++++.+.+..
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~------------------------------------------ 207 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILS------------------------------------------ 207 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST------------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcccc------------------------------------------
Confidence 57899999999999999999999999999998764310
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEE-EeecCCCeEEEEEeCEEEEcc
Q 044575 92 RDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVK-SKEKKADKVVEEVFDAVVVAT 170 (454)
Q Consensus 92 ~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~~d~vViAt 170 (454)
. ...++.+.+.+.+++.++. ++++++|.+++..+++ ...|+ +.++ ++.+|.||+|+
T Consensus 208 ----~--~~~~~~~~l~~~l~~~Gv~--i~~~~~v~~i~~~~~~---------~~~v~~~~~g------~i~aD~Vv~a~ 264 (463)
T 4dna_A 208 ----R--FDQDMRRGLHAAMEEKGIR--ILCEDIIQSVSADADG---------RRVATTMKHG------EIVADQVMLAL 264 (463)
T ss_dssp ----T--SCHHHHHHHHHHHHHTTCE--EECSCCEEEEEECTTS---------CEEEEESSSC------EEEESEEEECS
T ss_pred ----c--cCHHHHHHHHHHHHHCCCE--EECCCEEEEEEEcCCC---------EEEEEEcCCC------eEEeCEEEEee
Confidence 0 0157778888888888988 8999999999876432 34555 4332 28899999999
Q ss_pred CCCCCCCCC
Q 044575 171 GHYSYPRLP 179 (454)
Q Consensus 171 G~~~~p~~p 179 (454)
| ..|+..
T Consensus 265 G--~~p~~~ 271 (463)
T 4dna_A 265 G--RMPNTN 271 (463)
T ss_dssp C--EEESCT
T ss_pred C--cccCCC
Confidence 9 677655
No 227
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.38 E-value=3.7e-06 Score=85.29 Aligned_cols=109 Identities=17% Similarity=0.194 Sum_probs=79.3
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKKG 91 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (454)
.++|+|||||+.|+.+|..|++.|.+|+++++.. +.
T Consensus 210 ~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~-~l------------------------------------------- 245 (519)
T 3qfa_A 210 PGKTLVVGASYVALECAGFLAGIGLDVTVMVRSI-LL------------------------------------------- 245 (519)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-SS-------------------------------------------
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEeccc-cc-------------------------------------------
Confidence 4679999999999999999999999999999742 10
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccC
Q 044575 92 RDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATG 171 (454)
Q Consensus 92 ~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG 171 (454)
+. -..++.+.+.+..++.++. +.++++|.+|...+++. .+ ...++....++++..++.+|.||+|+|
T Consensus 246 ---~~--~d~~~~~~~~~~l~~~GV~--v~~~~~v~~v~~~~~~~-----~~-~~~v~~~~~~g~~~~~~~~D~vi~a~G 312 (519)
T 3qfa_A 246 ---RG--FDQDMANKIGEHMEEHGIK--FIRQFVPIKVEQIEAGT-----PG-RLRVVAQSTNSEEIIEGEYNTVMLAIG 312 (519)
T ss_dssp ---TT--SCHHHHHHHHHHHHHTTCE--EEESEEEEEEEEEECCT-----TC-EEEEEEEESSSSCEEEEEESEEEECSC
T ss_pred ---cc--CCHHHHHHHHHHHHHCCCE--EEeCCeEEEEEEccCCC-----Cc-eEEEEEEECCCcEEEEEECCEEEEecC
Confidence 00 0167788888888888988 88999888887654210 01 445555443323345678999999999
Q ss_pred CCCCCCCC
Q 044575 172 HYSYPRLP 179 (454)
Q Consensus 172 ~~~~p~~p 179 (454)
..|+..
T Consensus 313 --~~p~~~ 318 (519)
T 3qfa_A 313 --RDACTR 318 (519)
T ss_dssp --EEESCS
T ss_pred --CcccCC
Confidence 777654
No 228
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.35 E-value=3.4e-07 Score=90.45 Aligned_cols=42 Identities=38% Similarity=0.733 Sum_probs=39.4
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcC-CcEEEEeeCCCCCcccc
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEG-HRVVVLEQNHDVGGQWL 52 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g-~~v~vie~~~~~GG~w~ 52 (454)
..+||+|||||++||+||..|++.| .+|+|+|+++.+||.+.
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~ 47 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCH 47 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCccc
Confidence 4579999999999999999999999 89999999999999876
No 229
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.35 E-value=2.8e-07 Score=93.68 Aligned_cols=42 Identities=43% Similarity=0.639 Sum_probs=39.1
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccc
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWL 52 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~ 52 (454)
..+||+|||||+|||+||..|++.|++|+|+|+++.+||...
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~ 44 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTY 44 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCcee
Confidence 357999999999999999999999999999999999999864
No 230
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=98.35 E-value=3.1e-07 Score=92.52 Aligned_cols=45 Identities=42% Similarity=0.664 Sum_probs=40.7
Q ss_pred hccCCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccc
Q 044575 8 QCAQSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWL 52 (454)
Q Consensus 8 ~~~~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~ 52 (454)
++...+||+|||||++||+||..|++.|++|+|+|+++.+||.+.
T Consensus 7 ~~~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~~~ 51 (489)
T 2jae_A 7 KVKGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRVW 51 (489)
T ss_dssp CCCSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCC
T ss_pred cccCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCcee
Confidence 345568999999999999999999999999999999999999753
No 231
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.35 E-value=7.9e-07 Score=86.61 Aligned_cols=90 Identities=9% Similarity=0.157 Sum_probs=69.5
Q ss_pred CeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCc---Cccchhhh-----------------c-cCCCeEEcCceeEEe
Q 044575 206 EVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNI---SEGLSKVI-----------------S-KHNNLHLHPQIDCLR 264 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~---~~~~~~~l-----------------~-~~~~i~~~~~v~~v~ 264 (454)
-+|+|||+|+.|+.+|..|...+.+|+++++.+.+ .+.+.+.+ . ...+++.+..|++++
T Consensus 10 ~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~~~~l~~~l~g~~~~~~l~~~~~~~~~~~~i~~~~~~~V~~id 89 (385)
T 3klj_A 10 TKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKNDWYEKNNIKVITSEFATSID 89 (385)
T ss_dssp CSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBCGGGHHHHHHSCCCGGGTBSSCHHHHHHTTCEEECSCCEEEEE
T ss_pred CCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCcccChhhHHHcCCCCHHHccCCCHHHHHHCCCEEEeCCEEEEEE
Confidence 47999999999999999998888999999998764 12222211 1 123566778899997
Q ss_pred cCC-cEEEeCCCEEeeceEEEccCcccCCcCC
Q 044575 265 EDG-RVTFVDGCWVTADTILYCTGYSYSFPFL 295 (454)
Q Consensus 265 ~~~-~v~~~dG~~i~~D~vI~atG~~~~~~~l 295 (454)
.+. .|++.+|+++.+|.+|+|||.+|..|-+
T Consensus 90 ~~~~~v~~~~g~~~~yd~lvlAtG~~p~~p~i 121 (385)
T 3klj_A 90 PNNKLVTLKSGEKIKYEKLIIASGSIANKIKV 121 (385)
T ss_dssp TTTTEEEETTSCEEECSEEEECCCEEECCCCC
T ss_pred CCCCEEEECCCCEEECCEEEEecCCCcCCCCC
Confidence 544 6888999999999999999998876544
No 232
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.34 E-value=2.5e-06 Score=81.26 Aligned_cols=104 Identities=16% Similarity=0.129 Sum_probs=76.4
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKKG 91 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (454)
.++|+|||+|..|+.+|..|++.|.+|+++++.+.+
T Consensus 152 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~-------------------------------------------- 187 (335)
T 2zbw_A 152 GKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQF-------------------------------------------- 187 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSC--------------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCcc--------------------------------------------
Confidence 578999999999999999999999999999987532
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccC
Q 044575 92 RDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATG 171 (454)
Q Consensus 92 ~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG 171 (454)
....+..+.+.+..++.++. +.++++|.+++.. +. ...|++....++...++.+|.||+|+|
T Consensus 188 ------~~~~~~~~~l~~~l~~~gv~--v~~~~~v~~i~~~-~~---------~~~v~~~~~~~g~~~~i~~D~vi~a~G 249 (335)
T 2zbw_A 188 ------RAHEASVKELMKAHEEGRLE--VLTPYELRRVEGD-ER---------VRWAVVFHNQTQEELALEVDAVLILAG 249 (335)
T ss_dssp ------CSCHHHHHHHHHHHHTTSSE--EETTEEEEEEEES-SS---------EEEEEEEETTTCCEEEEECSEEEECCC
T ss_pred ------CccHHHHHHHHhccccCCeE--EecCCcceeEccC-CC---------eeEEEEEECCCCceEEEecCEEEEeec
Confidence 00134556666666666877 8899999999873 21 235666532123345789999999999
Q ss_pred CCCCCCCC
Q 044575 172 HYSYPRLP 179 (454)
Q Consensus 172 ~~~~p~~p 179 (454)
..|+.+
T Consensus 250 --~~p~~~ 255 (335)
T 2zbw_A 250 --YITKLG 255 (335)
T ss_dssp --EEEECG
T ss_pred --CCCCch
Confidence 666653
No 233
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.33 E-value=1.6e-06 Score=89.42 Aligned_cols=98 Identities=22% Similarity=0.317 Sum_probs=77.5
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKKG 91 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (454)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+..
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~------------------------------------------ 224 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMP------------------------------------------ 224 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT------------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCcccc------------------------------------------
Confidence 57899999999999999999999999999998764310
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccC
Q 044575 92 RDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATG 171 (454)
Q Consensus 92 ~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG 171 (454)
. ...++.+.+.+..++.++. ++++++|.+++... . .|++.++. ++.+|.||+|+|
T Consensus 225 ----~--~~~~~~~~l~~~l~~~GV~--i~~~~~v~~i~~~~-----------~-~v~~~~g~-----~i~~D~Vi~a~G 279 (588)
T 3ics_A 225 ----P--IDYEMAAYVHEHMKNHDVE--LVFEDGVDALEENG-----------A-VVRLKSGS-----VIQTDMLILAIG 279 (588)
T ss_dssp ----T--SCHHHHHHHHHHHHHTTCE--EECSCCEEEEEGGG-----------T-EEEETTSC-----EEECSEEEECSC
T ss_pred ----c--CCHHHHHHHHHHHHHcCCE--EEECCeEEEEecCC-----------C-EEEECCCC-----EEEcCEEEEccC
Confidence 0 1156778888888888988 89999999987542 1 35565544 789999999999
Q ss_pred CCCCCCC
Q 044575 172 HYSYPRL 178 (454)
Q Consensus 172 ~~~~p~~ 178 (454)
..|+.
T Consensus 280 --~~p~~ 284 (588)
T 3ics_A 280 --VQPES 284 (588)
T ss_dssp --EEECC
T ss_pred --CCCCh
Confidence 67765
No 234
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.33 E-value=2.6e-06 Score=85.85 Aligned_cols=102 Identities=26% Similarity=0.346 Sum_probs=76.8
Q ss_pred CCcEEEECcChHHHHHHHHHHH----cCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRK----EGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFV 87 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~----~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (454)
.++|+|||||+.|+.+|..|++ .|.+|+++++.+.+.+
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~-------------------------------------- 221 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMG-------------------------------------- 221 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTT--------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCccccc--------------------------------------
Confidence 5789999999999999999976 4789999998652200
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEE
Q 044575 88 LKKGRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVV 167 (454)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vV 167 (454)
..++ .++.+++.+..++.++. ++++++|.+++..++ ...|++.++. ++.+|.||
T Consensus 222 -------~~l~--~~~~~~~~~~l~~~GV~--v~~~~~V~~i~~~~~----------~~~v~l~dG~-----~i~aD~Vv 275 (493)
T 1m6i_A 222 -------KILP--EYLSNWTMEKVRREGVK--VMPNAIVQSVGVSSG----------KLLIKLKDGR-----KVETDHIV 275 (493)
T ss_dssp -------TTSC--HHHHHHHHHHHHTTTCE--EECSCCEEEEEEETT----------EEEEEETTSC-----EEEESEEE
T ss_pred -------ccCC--HHHHHHHHHHHHhcCCE--EEeCCEEEEEEecCC----------eEEEEECCCC-----EEECCEEE
Confidence 0011 46677778888888887 999999999976432 4456666554 78999999
Q ss_pred EccCCCCCCCCC
Q 044575 168 VATGHYSYPRLP 179 (454)
Q Consensus 168 iAtG~~~~p~~p 179 (454)
+|+| ..|+..
T Consensus 276 ~a~G--~~pn~~ 285 (493)
T 1m6i_A 276 AAVG--LEPNVE 285 (493)
T ss_dssp ECCC--EEECCT
T ss_pred ECCC--CCccHH
Confidence 9999 677653
No 235
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.31 E-value=2.7e-07 Score=93.68 Aligned_cols=41 Identities=44% Similarity=0.686 Sum_probs=38.8
Q ss_pred CCcEEEECcChHHHHHHHHHHHcC-CcEEEEeeCCCCCcccc
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEG-HRVVVLEQNHDVGGQWL 52 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g-~~v~vie~~~~~GG~w~ 52 (454)
.+||+|||||+|||+||..|++.| .+|+|+|+++.+||.+.
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~~ 49 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRLQ 49 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCcee
Confidence 479999999999999999999999 99999999999999875
No 236
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.29 E-value=2.2e-06 Score=81.60 Aligned_cols=103 Identities=20% Similarity=0.180 Sum_probs=73.7
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKK 90 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (454)
..++|+|||+|+.|+.+|..|++.|.+|+++++.+.+.
T Consensus 172 ~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~------------------------------------------ 209 (338)
T 3itj_A 172 RNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLR------------------------------------------ 209 (338)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC------------------------------------------
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccC------------------------------------------
Confidence 35789999999999999999999999999999875320
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEcc
Q 044575 91 GRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVAT 170 (454)
Q Consensus 91 ~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAt 170 (454)
....+ .+.+.+..++. +.++++|.+|+..+.. ...|++.+..++...++.+|.||+|+
T Consensus 210 --------~~~~~---~~~l~~~~gv~--i~~~~~v~~i~~~~~~---------~~~v~~~~~~~g~~~~i~~D~vi~a~ 267 (338)
T 3itj_A 210 --------ASTIM---QKRAEKNEKIE--ILYNTVALEAKGDGKL---------LNALRIKNTKKNEETDLPVSGLFYAI 267 (338)
T ss_dssp --------SCHHH---HHHHHHCTTEE--EECSEEEEEEEESSSS---------EEEEEEEETTTTEEEEEECSEEEECS
T ss_pred --------CCHHH---HHHHHhcCCeE--EeecceeEEEEcccCc---------EEEEEEEECCCCceEEEEeCEEEEEe
Confidence 00222 22222333666 8889999999876432 33477766433445678999999999
Q ss_pred CCCCCCCCC
Q 044575 171 GHYSYPRLP 179 (454)
Q Consensus 171 G~~~~p~~p 179 (454)
| ..|+..
T Consensus 268 G--~~p~~~ 274 (338)
T 3itj_A 268 G--HTPATK 274 (338)
T ss_dssp C--EEECCG
T ss_pred C--CCCChh
Confidence 9 666654
No 237
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.27 E-value=1.5e-06 Score=85.40 Aligned_cols=89 Identities=13% Similarity=0.150 Sum_probs=65.8
Q ss_pred CeEEEEcCCCCHHHHHHHHhh---hcCeEEEecccCCcC--c-----------------cchhhhccC-CCeEEcCceeE
Q 044575 206 EVVVVVGNSLSGQDISMELVE---VAKEVHLSAKSLNIS--E-----------------GLSKVISKH-NNLHLHPQIDC 262 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~---~~~~V~l~~r~~~~~--~-----------------~~~~~l~~~-~~i~~~~~v~~ 262 (454)
++|+|||||++|+.+|..|++ .+.+|+++++.+.+. + .+.+.+.+. .+++.. .+++
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~-~v~~ 80 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKGIQFQEG-TVEK 80 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHHTGGGTCEEEEC-EEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHHHhhCCeEEEEe-eEEE
Confidence 589999999999999999999 889999999887541 1 011222222 344444 7888
Q ss_pred EecCC-cEEEeCCCE----EeeceEEEccCcccCCcCC
Q 044575 263 LREDG-RVTFVDGCW----VTADTILYCTGYSYSFPFL 295 (454)
Q Consensus 263 v~~~~-~v~~~dG~~----i~~D~vI~atG~~~~~~~l 295 (454)
++.++ .|++.+|+. +++|.||+|||.+|+.+-+
T Consensus 81 i~~~~~~V~~~~g~~~~~~~~~d~lViAtG~~~~~~~i 118 (409)
T 3h8l_A 81 IDAKSSMVYYTKPDGSMAEEEYDYVIVGIGAHLATELV 118 (409)
T ss_dssp EETTTTEEEEECTTSCEEEEECSEEEECCCCEECGGGS
T ss_pred EeCCCCEEEEccCCcccceeeCCEEEECCCCCcCccCC
Confidence 87543 688888764 8899999999999876543
No 238
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.27 E-value=5.6e-07 Score=88.82 Aligned_cols=40 Identities=38% Similarity=0.716 Sum_probs=37.7
Q ss_pred CcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccc
Q 044575 13 KNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWL 52 (454)
Q Consensus 13 ~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~ 52 (454)
+||+|||||++|++||..|++.|.+|+|+|+++.+||.+.
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~ 40 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRFT 40 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCceeE
Confidence 3899999999999999999999999999999999999765
No 239
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.27 E-value=1.6e-06 Score=85.85 Aligned_cols=89 Identities=19% Similarity=0.255 Sum_probs=66.6
Q ss_pred CeEEEEcCCCCHHHHHHHHhh--hcCeEEEecccCCcC--c-----------------cchhhhccC-CCeEEcCceeEE
Q 044575 206 EVVVVVGNSLSGQDISMELVE--VAKEVHLSAKSLNIS--E-----------------GLSKVISKH-NNLHLHPQIDCL 263 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~--~~~~V~l~~r~~~~~--~-----------------~~~~~l~~~-~~i~~~~~v~~v 263 (454)
++|+|||+|+.|+.+|..|++ .+.+|+++++.+.+. + .+.+.+.+. .+++ ...++.+
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gv~~~-~~~v~~i 81 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFI-NEKAESI 81 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEE-CSCEEEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHHHHhcCCEEE-EEEEEEE
Confidence 689999999999999999999 678999999987651 1 111122222 2333 4578888
Q ss_pred ecCC-cEEEeCCCEEeeceEEEccCcccCCcCC
Q 044575 264 REDG-RVTFVDGCWVTADTILYCTGYSYSFPFL 295 (454)
Q Consensus 264 ~~~~-~v~~~dG~~i~~D~vI~atG~~~~~~~l 295 (454)
+.+. .|.+.+|+++.+|.+|+|||.+|+.+-+
T Consensus 82 d~~~~~v~~~~g~~i~~d~liiAtG~~~~~pg~ 114 (430)
T 3h28_A 82 DPDANTVTTQSGKKIEYDYLVIATGPKLVFGAE 114 (430)
T ss_dssp ETTTTEEEETTCCEEECSEEEECCCCEEECCSB
T ss_pred ECCCCEEEECCCcEEECCEEEEcCCcccccCCC
Confidence 7554 6788889889999999999999887633
No 240
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.27 E-value=2.4e-06 Score=85.10 Aligned_cols=100 Identities=21% Similarity=0.265 Sum_probs=72.6
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKK 90 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (454)
..++|+|||+|+.|+.+|..|++.|.+|+++++.+.+...
T Consensus 147 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~---------------------------------------- 186 (449)
T 3kd9_A 147 KVENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRR---------------------------------------- 186 (449)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT----------------------------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchh----------------------------------------
Confidence 3468999999999999999999999999999997643100
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEcc
Q 044575 91 GRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVAT 170 (454)
Q Consensus 91 ~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAt 170 (454)
. ...++.+.+.+..++. +. +++++.|.+++..+ . ...+ ..++. ++.+|.||+|+
T Consensus 187 -----~--~~~~~~~~l~~~l~~~-v~--i~~~~~v~~i~~~~-~---------v~~v-~~~g~-----~i~~D~Vv~a~ 240 (449)
T 3kd9_A 187 -----S--FDKEVTDILEEKLKKH-VN--LRLQEITMKIEGEE-R---------VEKV-VTDAG-----EYKAELVILAT 240 (449)
T ss_dssp -----T--SCHHHHHHHHHHHTTT-SE--EEESCCEEEEECSS-S---------CCEE-EETTE-----EEECSEEEECS
T ss_pred -----h--cCHHHHHHHHHHHHhC-cE--EEeCCeEEEEeccC-c---------EEEE-EeCCC-----EEECCEEEEee
Confidence 0 0156667777766655 55 88899999987543 1 1122 23332 68999999999
Q ss_pred CCCCCCCC
Q 044575 171 GHYSYPRL 178 (454)
Q Consensus 171 G~~~~p~~ 178 (454)
| ..|+.
T Consensus 241 G--~~p~~ 246 (449)
T 3kd9_A 241 G--IKPNI 246 (449)
T ss_dssp C--EEECC
T ss_pred C--CccCH
Confidence 9 67765
No 241
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.25 E-value=1.7e-06 Score=80.67 Aligned_cols=90 Identities=17% Similarity=0.232 Sum_probs=65.0
Q ss_pred CeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCcC---------cc------------chhhhccCCCe-EEcCceeEE
Q 044575 206 EVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNIS---------EG------------LSKVISKHNNL-HLHPQIDCL 263 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~~---------~~------------~~~~l~~~~~i-~~~~~v~~v 263 (454)
.+|+|||+|++|+.+|..|++.+.+|+++++.+... +. +.+.+.+...+ +....++.+
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i 82 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASHSHGFLGQDGKAPGEIIAEARRQIERYPTIHWVEGRVTDA 82 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSCCCSSTTCTTCCHHHHHHHHHHHHTTCTTEEEEESCEEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchhhcCCcCCCCCCHHHHHHHHHHHHHhcCCeEEEEeEEEEE
Confidence 479999999999999999999999999999754320 00 11122232222 335678887
Q ss_pred ecCC---cEEEeCCCEEeeceEEEccCcccCCcCC
Q 044575 264 REDG---RVTFVDGCWVTADTILYCTGYSYSFPFL 295 (454)
Q Consensus 264 ~~~~---~v~~~dG~~i~~D~vI~atG~~~~~~~l 295 (454)
..++ .|.+.+|+++.+|.||+|||..|..+-+
T Consensus 83 ~~~~~~~~v~~~~g~~~~~d~vviAtG~~~~~~~~ 117 (297)
T 3fbs_A 83 KGSFGEFIVEIDGGRRETAGRLILAMGVTDELPEI 117 (297)
T ss_dssp EEETTEEEEEETTSCEEEEEEEEECCCCEEECCCC
T ss_pred EEcCCeEEEEECCCCEEEcCEEEECCCCCCCCCCC
Confidence 6442 5777889899999999999999876533
No 242
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.25 E-value=6e-07 Score=88.64 Aligned_cols=40 Identities=43% Similarity=0.645 Sum_probs=37.4
Q ss_pred CcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccc
Q 044575 13 KNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWL 52 (454)
Q Consensus 13 ~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~ 52 (454)
+||+|||||++|++||..|++.|.+|+|+|+++.+||...
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~ 40 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITGGRFT 40 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTSS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCCCcee
Confidence 4899999999999999999999999999999999998754
No 243
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.24 E-value=6.8e-06 Score=77.22 Aligned_cols=101 Identities=22% Similarity=0.248 Sum_probs=71.1
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKKG 91 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (454)
.++|+|||+|+.|+.+|..|++.+.+|+++++.+.+.
T Consensus 144 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~------------------------------------------- 180 (310)
T 1fl2_A 144 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK------------------------------------------- 180 (310)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCC-------------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccC-------------------------------------------
Confidence 4789999999999999999999999999999875320
Q ss_pred CCCCCCCCHHHHHHHHHHHHHH-hCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEcc
Q 044575 92 RDVRRFPGHKELWLYLKDFCQR-FGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVAT 170 (454)
Q Consensus 92 ~~~~~~~~~~~~~~yl~~~~~~-~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAt 170 (454)
.... +.+...+ .++. ++++++|.++...++. -..|++.+..+++..++.+|.||+|+
T Consensus 181 -------~~~~----~~~~l~~~~gv~--v~~~~~v~~i~~~~~~---------v~~v~~~~~~~g~~~~i~~D~vi~a~ 238 (310)
T 1fl2_A 181 -------ADQV----LQDKLRSLKNVD--IILNAQTTEVKGDGSK---------VVGLEYRDRVSGDIHNIELAGIFVQI 238 (310)
T ss_dssp -------SCHH----HHHHHHTCTTEE--EESSEEEEEEEESSSS---------EEEEEEEETTTCCEEEEECSEEEECS
T ss_pred -------ccHH----HHHHHhhCCCeE--EecCCceEEEEcCCCc---------EEEEEEEECCCCcEEEEEcCEEEEee
Confidence 0012 2222333 4665 8889999999864321 22466665333445578999999999
Q ss_pred CCCCCCCCC
Q 044575 171 GHYSYPRLP 179 (454)
Q Consensus 171 G~~~~p~~p 179 (454)
| ..|+..
T Consensus 239 G--~~p~~~ 245 (310)
T 1fl2_A 239 G--LLPNTN 245 (310)
T ss_dssp C--EEESCG
T ss_pred C--CccCch
Confidence 9 666643
No 244
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=98.23 E-value=6.9e-07 Score=90.34 Aligned_cols=44 Identities=43% Similarity=0.613 Sum_probs=39.3
Q ss_pred ccCCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccc
Q 044575 9 CAQSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWL 52 (454)
Q Consensus 9 ~~~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~ 52 (454)
|.+.+||+|||||++||+||..|++.|++|+|+|+++.+||.+.
T Consensus 10 ~~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~ 53 (504)
T 1sez_A 10 HSSAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLR 53 (504)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCC
T ss_pred cCCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCcee
Confidence 55678999999999999999999999999999999999999875
No 245
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.23 E-value=5.5e-07 Score=89.73 Aligned_cols=41 Identities=49% Similarity=0.810 Sum_probs=38.8
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccc
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWL 52 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~ 52 (454)
.+||+|||||++||+||..|++.|++|+|+|+++.+||.+.
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~ 45 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTW 45 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCcee
Confidence 47999999999999999999999999999999999999875
No 246
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.23 E-value=4.5e-06 Score=80.37 Aligned_cols=104 Identities=17% Similarity=0.158 Sum_probs=73.9
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKKG 91 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (454)
.++|+|||+|+.|+.+|..|++.+.+|+++++.+.+.
T Consensus 163 ~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~------------------------------------------- 199 (360)
T 3ab1_A 163 GKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQ------------------------------------------- 199 (360)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCS-------------------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCC-------------------------------------------
Confidence 4789999999999999999999999999999875320
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccC
Q 044575 92 RDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATG 171 (454)
Q Consensus 92 ~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG 171 (454)
...++.+.+.+..++.++. +.++++|.+++..++. -..|++... ++...++.+|.||+|+|
T Consensus 200 -------~~~~~~~~l~~~~~~~gv~--i~~~~~v~~i~~~~~~---------v~~v~~~~~-~g~~~~i~~D~vi~a~G 260 (360)
T 3ab1_A 200 -------GHGKTAHEVERARANGTID--VYLETEVASIEESNGV---------LTRVHLRSS-DGSKWTVEADRLLILIG 260 (360)
T ss_dssp -------SCSHHHHSSHHHHHHTSEE--EESSEEEEEEEEETTE---------EEEEEEEET-TCCEEEEECSEEEECCC
T ss_pred -------CCHHHHHHHHHHhhcCceE--EEcCcCHHHhccCCCc---------eEEEEEEec-CCCeEEEeCCEEEECCC
Confidence 0012344455556666776 8899999999875321 224555421 13345789999999999
Q ss_pred CCCCCCCC
Q 044575 172 HYSYPRLP 179 (454)
Q Consensus 172 ~~~~p~~p 179 (454)
..|+..
T Consensus 261 --~~p~~~ 266 (360)
T 3ab1_A 261 --FKSNLG 266 (360)
T ss_dssp --BCCSCG
T ss_pred --CCCCHH
Confidence 666653
No 247
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=98.23 E-value=1e-06 Score=88.63 Aligned_cols=43 Identities=35% Similarity=0.468 Sum_probs=40.0
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcC-CcEEEEeeCCCCCccccc
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEG-HRVVVLEQNHDVGGQWLY 53 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g-~~v~vie~~~~~GG~w~~ 53 (454)
..+||+|||||++|+++|..|++.| .+|+|+|+++.+||.|..
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~ 51 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRS 51 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCE
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeee
Confidence 4589999999999999999999998 799999999999999874
No 248
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.20 E-value=3.1e-06 Score=79.65 Aligned_cols=103 Identities=15% Similarity=0.084 Sum_probs=70.8
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKK 90 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (454)
..++|+|||+|+.|+.+|..|++.|.+|+++++.+.+.
T Consensus 142 ~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~------------------------------------------ 179 (311)
T 2q0l_A 142 KNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFR------------------------------------------ 179 (311)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCC------------------------------------------
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccC------------------------------------------
Confidence 35789999999999999999999999999999875320
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEcc
Q 044575 91 GRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVAT 170 (454)
Q Consensus 91 ~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAt 170 (454)
...++. +.+.++.++. +.++++|.+++..++. ...|++.+..++...++.+|.||+|+
T Consensus 180 --------~~~~~~---~~l~~~~gv~--v~~~~~v~~i~~~~~~---------v~~v~~~~~~~g~~~~i~~D~vi~a~ 237 (311)
T 2q0l_A 180 --------CAPITL---EHAKNNDKIE--FLTPYVVEEIKGDASG---------VSSLSIKNTATNEKRELVVPGFFIFV 237 (311)
T ss_dssp --------SCHHHH---HHHHTCTTEE--EETTEEEEEEEEETTE---------EEEEEEEETTTCCEEEEECSEEEECS
T ss_pred --------CCHHHH---HHHhhCCCeE--EEeCCEEEEEECCCCc---------EeEEEEEecCCCceEEEecCEEEEEe
Confidence 002222 2222224555 7889999999865321 23466654222334578999999999
Q ss_pred CCCCCCCCC
Q 044575 171 GHYSYPRLP 179 (454)
Q Consensus 171 G~~~~p~~p 179 (454)
| ..|+.+
T Consensus 238 G--~~p~~~ 244 (311)
T 2q0l_A 238 G--YDVNNA 244 (311)
T ss_dssp C--EEECCG
T ss_pred c--CccChh
Confidence 9 677654
No 249
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=98.20 E-value=1.1e-06 Score=85.62 Aligned_cols=41 Identities=37% Similarity=0.694 Sum_probs=38.9
Q ss_pred CcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCccccc
Q 044575 13 KNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLY 53 (454)
Q Consensus 13 ~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~ 53 (454)
++|+|||||++|+++|..|++.|.+|+|+|+++.+||.|..
T Consensus 4 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~ 44 (384)
T 2bi7_A 4 KKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYD 44 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCcccc
Confidence 68999999999999999999999999999999999999863
No 250
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.20 E-value=9.2e-06 Score=76.72 Aligned_cols=101 Identities=20% Similarity=0.140 Sum_probs=71.1
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKKG 91 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (454)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+.
T Consensus 155 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~------------------------------------------- 191 (319)
T 3cty_A 155 GKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYM------------------------------------------- 191 (319)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCC-------------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccC-------------------------------------------
Confidence 4789999999999999999999999999999865320
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccC
Q 044575 92 RDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATG 171 (454)
Q Consensus 92 ~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG 171 (454)
....+.+ .+.+.++. +.++++|.++...+.. ...|.+.+..++...++.+|.||+|+|
T Consensus 192 -------~~~~l~~----~l~~~gv~--i~~~~~v~~i~~~~~~---------v~~v~~~~~~~g~~~~i~~D~vi~a~G 249 (319)
T 3cty_A 192 -------CENAYVQ----EIKKRNIP--YIMNAQVTEIVGDGKK---------VTGVKYKDRTTGEEKLIETDGVFIYVG 249 (319)
T ss_dssp -------SCHHHHH----HHHHTTCC--EECSEEEEEEEESSSS---------EEEEEEEETTTCCEEEECCSEEEECCC
T ss_pred -------CCHHHHH----HHhcCCcE--EEcCCeEEEEecCCce---------EEEEEEEEcCCCceEEEecCEEEEeeC
Confidence 0022222 33356777 8899999999865321 123555532223344689999999999
Q ss_pred CCCCCCCC
Q 044575 172 HYSYPRLP 179 (454)
Q Consensus 172 ~~~~p~~p 179 (454)
..|+..
T Consensus 250 --~~p~~~ 255 (319)
T 3cty_A 250 --LIPQTS 255 (319)
T ss_dssp --EEECCG
T ss_pred --CccChH
Confidence 666643
No 251
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.20 E-value=5.3e-06 Score=82.95 Aligned_cols=104 Identities=24% Similarity=0.310 Sum_probs=73.9
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKKG 91 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (454)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+...
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~----------------------------------------- 210 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALIT----------------------------------------- 210 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCCC-----------------------------------------
Confidence 478999999999999999999999999999997643100
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccC
Q 044575 92 RDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATG 171 (454)
Q Consensus 92 ~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG 171 (454)
+ ...++.+.+.+..+ +. +.++++|.+++..+++ ...|++.+. ++...++.+|.||+|+|
T Consensus 211 -----~-~d~~~~~~l~~~l~---v~--i~~~~~v~~i~~~~~~---------~v~v~~~~~-~G~~~~i~~D~vi~a~G 269 (466)
T 3l8k_A 211 -----L-EDQDIVNTLLSILK---LN--IKFNSPVTEVKKIKDD---------EYEVIYSTK-DGSKKSIFTNSVVLAAG 269 (466)
T ss_dssp -----S-CCHHHHHHHHHHHC---CC--EECSCCEEEEEEEETT---------EEEEEECCT-TSCCEEEEESCEEECCC
T ss_pred -----C-CCHHHHHHHHhcCE---EE--EEECCEEEEEEEcCCC---------cEEEEEEec-CCceEEEEcCEEEECcC
Confidence 0 01455555554433 55 8889999999875412 455666521 12234688999999999
Q ss_pred CCCCCCCC
Q 044575 172 HYSYPRLP 179 (454)
Q Consensus 172 ~~~~p~~p 179 (454)
..|+..
T Consensus 270 --~~p~~~ 275 (466)
T 3l8k_A 270 --RRPVIP 275 (466)
T ss_dssp --EEECCC
T ss_pred --CCcccc
Confidence 777765
No 252
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.19 E-value=1.7e-05 Score=81.97 Aligned_cols=108 Identities=23% Similarity=0.249 Sum_probs=75.4
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKKG 91 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (454)
.++|+|||||+.|+.+|..|++.|.+|+++++. .+.
T Consensus 286 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~-~~l------------------------------------------- 321 (598)
T 2x8g_A 286 PGKTLVIGASYVALECAGFLASLGGDVTVMVRS-ILL------------------------------------------- 321 (598)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CSS-------------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC-cCc-------------------------------------------
Confidence 468999999999999999999999999999985 210
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEc-----CCCccccCCcCCcEEEEEeecCCCeEEEEEeCEE
Q 044575 92 RDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGML-----DCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAV 166 (454)
Q Consensus 92 ~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~-----~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~v 166 (454)
+. ...++.+++.+..++.++. +++++.+.+|... ..+ ..+ ...+.....+ +....+.+|.|
T Consensus 322 ---~~--~d~~~~~~~~~~l~~~gv~--i~~~~~v~~v~~~~~~~~~~~-----~~~-~~~v~~~~~~-g~~~~~~~D~v 387 (598)
T 2x8g_A 322 ---RG--FDQQMAEKVGDYMENHGVK--FAKLCVPDEIKQLKVVDTENN-----KPG-LLLVKGHYTD-GKKFEEEFETV 387 (598)
T ss_dssp ---TT--SCHHHHHHHHHHHHHTTCE--EEETEEEEEEEEEECCBTTTT-----BCC-EEEEEEEETT-SCEEEEEESEE
T ss_pred ---Cc--CCHHHHHHHHHHHHhCCCE--EEECCeEEEEEeccccccccC-----CCc-eEEEEEEeCC-CcEEeccCCEE
Confidence 00 0156777788888888888 8889988888653 110 001 4445433222 23344569999
Q ss_pred EEccCCCCCCCCC
Q 044575 167 VVATGHYSYPRLP 179 (454)
Q Consensus 167 ViAtG~~~~p~~p 179 (454)
|+|+| ..|+..
T Consensus 388 i~a~G--~~p~~~ 398 (598)
T 2x8g_A 388 IFAVG--REPQLS 398 (598)
T ss_dssp EECSC--EEECGG
T ss_pred EEEeC--CccccC
Confidence 99999 677653
No 253
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.18 E-value=4.1e-06 Score=79.63 Aligned_cols=105 Identities=19% Similarity=0.188 Sum_probs=71.7
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKK 90 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (454)
..++|+|||+|..|+.+|..|++.|.+|+++++.+.+.
T Consensus 158 ~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~------------------------------------------ 195 (333)
T 1vdc_A 158 RNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFR------------------------------------------ 195 (333)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCC------------------------------------------
T ss_pred CCCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCC------------------------------------------
Confidence 35789999999999999999999999999999875320
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEcc
Q 044575 91 GRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVAT 170 (454)
Q Consensus 91 ~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAt 170 (454)
..+.+ .+++.++.++. +.++++|.+++..++.. . -..|.+.+..++...++.+|.||+|+
T Consensus 196 --------~~~~~---~~~~~~~~gv~--i~~~~~v~~i~~~~~~~------~-v~~v~~~~~~~g~~~~i~~D~vi~a~ 255 (333)
T 1vdc_A 196 --------ASKIM---QQRALSNPKID--VIWNSSVVEAYGDGERD------V-LGGLKVKNVVTGDVSDLKVSGLFFAI 255 (333)
T ss_dssp --------SCHHH---HHHHHTCTTEE--EECSEEEEEEEESSSSS------S-EEEEEEEETTTCCEEEEECSEEEECS
T ss_pred --------ccHHH---HHHHHhCCCee--EecCCceEEEeCCCCcc------c-eeeEEEEecCCCceEEEecCEEEEEe
Confidence 00111 12233344665 78899999998654210 0 22356654322334578999999999
Q ss_pred CCCCCCCCC
Q 044575 171 GHYSYPRLP 179 (454)
Q Consensus 171 G~~~~p~~p 179 (454)
| ..|+..
T Consensus 256 G--~~p~~~ 262 (333)
T 1vdc_A 256 G--HEPATK 262 (333)
T ss_dssp C--EEESCG
T ss_pred C--CccchH
Confidence 9 677654
No 254
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.18 E-value=9.4e-07 Score=88.66 Aligned_cols=40 Identities=35% Similarity=0.573 Sum_probs=38.0
Q ss_pred CcEEEECcChHHHHHHHHHHHcCC--cEEEEeeCCCCCcccc
Q 044575 13 KNVCVIGAGPSGLVAARELRKEGH--RVVVLEQNHDVGGQWL 52 (454)
Q Consensus 13 ~~VvIIGaG~aGl~aA~~l~~~g~--~v~vie~~~~~GG~w~ 52 (454)
+||+|||||++||+||.+|++.|. +|+|+|+++.+||...
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~~ 44 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIR 44 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTCC
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCceE
Confidence 689999999999999999999999 9999999999999875
No 255
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.17 E-value=1e-06 Score=88.42 Aligned_cols=42 Identities=40% Similarity=0.608 Sum_probs=38.3
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccc
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWL 52 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~ 52 (454)
..+||+|||||++|++||..|++.|++|+|+|+++.+||...
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~ 56 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVG 56 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceee
Confidence 468999999999999999999999999999999999999865
No 256
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.17 E-value=4.2e-06 Score=79.36 Aligned_cols=102 Identities=24% Similarity=0.259 Sum_probs=70.6
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKK 90 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (454)
..++|+|||+|+.|+.+|..|++.|.+|+++++.+.+.
T Consensus 151 ~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~------------------------------------------ 188 (325)
T 2q7v_A 151 KGKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLR------------------------------------------ 188 (325)
T ss_dssp TTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCC------------------------------------------
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCC------------------------------------------
Confidence 34789999999999999999999999999999875320
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEcc
Q 044575 91 GRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVAT 170 (454)
Q Consensus 91 ~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAt 170 (454)
....+ .+++.++.++. ++++++|.++...+ . ...|.+.+..++...++.+|.||+|+
T Consensus 189 --------~~~~~---~~~l~~~~gv~--i~~~~~v~~i~~~~-~---------v~~v~~~~~~~g~~~~i~~D~vi~a~ 245 (325)
T 2q7v_A 189 --------ANKVA---QARAFANPKMK--FIWDTAVEEIQGAD-S---------VSGVKLRNLKTGEVSELATDGVFIFI 245 (325)
T ss_dssp --------SCHHH---HHHHHTCTTEE--EECSEEEEEEEESS-S---------EEEEEEEETTTCCEEEEECSEEEECS
T ss_pred --------cchHH---HHHHHhcCCce--EecCCceEEEccCC-c---------EEEEEEEECCCCcEEEEEcCEEEEcc
Confidence 00122 22222223555 88899999998642 1 23566654222334578999999999
Q ss_pred CCCCCCCCC
Q 044575 171 GHYSYPRLP 179 (454)
Q Consensus 171 G~~~~p~~p 179 (454)
| ..|+..
T Consensus 246 G--~~p~~~ 252 (325)
T 2q7v_A 246 G--HVPNTA 252 (325)
T ss_dssp C--EEESCG
T ss_pred C--CCCChH
Confidence 9 677654
No 257
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.16 E-value=8.8e-06 Score=82.01 Aligned_cols=101 Identities=24% Similarity=0.332 Sum_probs=74.2
Q ss_pred CcEEEECcChHHHHHHHHHHHc--------------CCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccc
Q 044575 13 KNVCVIGAGPSGLVAARELRKE--------------GHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREI 78 (454)
Q Consensus 13 ~~VvIIGaG~aGl~aA~~l~~~--------------g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (454)
.+++|||||+.|+.+|..|++. ..+|+++|..+.+.
T Consensus 218 ~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il------------------------------ 267 (502)
T 4g6h_A 218 LSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVL------------------------------ 267 (502)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSS------------------------------
T ss_pred cceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccc------------------------------
Confidence 4699999999999999988653 36899999987541
Q ss_pred cccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCC-Ce
Q 044575 79 MGYTDFPFVLKKGRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKA-DK 157 (454)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~-~~ 157 (454)
+.| .+++.+++.+..++.+++ ++++++|.+|+.. ...+.....+. ..
T Consensus 268 ----------------~~~--~~~~~~~~~~~L~~~GV~--v~~~~~v~~v~~~------------~~~~~~~~~dg~~~ 315 (502)
T 4g6h_A 268 ----------------NMF--EKKLSSYAQSHLENTSIK--VHLRTAVAKVEEK------------QLLAKTKHEDGKIT 315 (502)
T ss_dssp ----------------TTS--CHHHHHHHHHHHHHTTCE--EETTEEEEEECSS------------EEEEEEECTTSCEE
T ss_pred ----------------cCC--CHHHHHHHHHHHHhccee--eecCceEEEEeCC------------ceEEEEEecCcccc
Confidence 011 168889999999999998 9999999998643 33333322211 12
Q ss_pred EEEEEeCEEEEccCCCCCCC
Q 044575 158 VVEEVFDAVVVATGHYSYPR 177 (454)
Q Consensus 158 ~~~~~~d~vViAtG~~~~p~ 177 (454)
..++.||.||.|+| ..|+
T Consensus 316 ~~~i~ad~viwa~G--v~~~ 333 (502)
T 4g6h_A 316 EETIPYGTLIWATG--NKAR 333 (502)
T ss_dssp EEEEECSEEEECCC--EECC
T ss_pred eeeeccCEEEEccC--CcCC
Confidence 34789999999999 5665
No 258
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=98.16 E-value=1.3e-06 Score=84.60 Aligned_cols=41 Identities=32% Similarity=0.566 Sum_probs=38.6
Q ss_pred CcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCccccc
Q 044575 13 KNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLY 53 (454)
Q Consensus 13 ~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~ 53 (454)
+||+|||||++|+++|..|++.|.+|+|+|+++.+||.+..
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~ 42 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYT 42 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGCE
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcceEe
Confidence 58999999999999999999999999999999999998763
No 259
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.16 E-value=5.3e-06 Score=80.02 Aligned_cols=107 Identities=15% Similarity=0.153 Sum_probs=72.0
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKKG 91 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (454)
.++|+|||+|++|+.+|..|++.|.+|+++++.+.+... .+
T Consensus 166 ~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~---------------~~------------------------ 206 (369)
T 3d1c_A 166 KGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDP---------------DA------------------------ 206 (369)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCEEEEECC------------------------------------------------
T ss_pred CCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCC---------------CC------------------------
Confidence 468999999999999999999999999999997643100 00
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhC-CCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEE-EeCEEEEc
Q 044575 92 RDVRRFPGHKELWLYLKDFCQRFG-LREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEE-VFDAVVVA 169 (454)
Q Consensus 92 ~~~~~~~~~~~~~~yl~~~~~~~~-~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~d~vViA 169 (454)
+ +.......+.+.+.+..++.+ +. +.++++|.+|+..++ ...|++.++. ++ .+|.||+|
T Consensus 207 -d-~~~~~~~~~~~~l~~~l~~~g~v~--~~~~~~v~~i~~~~~----------~~~v~~~~g~-----~~~~~d~vi~a 267 (369)
T 3d1c_A 207 -D-PSVRLSPYTRQRLGNVIKQGARIE--MNVHYTVKDIDFNNG----------QYHISFDSGQ-----SVHTPHEPILA 267 (369)
T ss_dssp ---CTTSCCHHHHHHHHHHHHTTCCEE--EECSCCEEEEEEETT----------EEEEEESSSC-----CEEESSCCEEC
T ss_pred -C-CCccCCHHHHHHHHHHHhhCCcEE--EecCcEEEEEEecCC----------ceEEEecCCe-----EeccCCceEEe
Confidence 0 000111455566666666664 76 888999999875432 5567666553 34 46999999
Q ss_pred cCCCCCCCC
Q 044575 170 TGHYSYPRL 178 (454)
Q Consensus 170 tG~~~~p~~ 178 (454)
|| ..|+.
T Consensus 268 ~G--~~~~~ 274 (369)
T 3d1c_A 268 TG--FDATK 274 (369)
T ss_dssp CC--BCGGG
T ss_pred ec--cCCcc
Confidence 99 67765
No 260
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.16 E-value=1.6e-06 Score=85.94 Aligned_cols=45 Identities=20% Similarity=0.354 Sum_probs=41.4
Q ss_pred ccCCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCccccc
Q 044575 9 CAQSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLY 53 (454)
Q Consensus 9 ~~~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~ 53 (454)
|...+||+|||||++|+++|..|++.|.+|+++|+++.+||.+..
T Consensus 3 ~~~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s 47 (433)
T 1d5t_A 3 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSS 47 (433)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCE
T ss_pred CCCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccccccc
Confidence 455689999999999999999999999999999999999998763
No 261
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=98.15 E-value=1.2e-06 Score=88.47 Aligned_cols=40 Identities=38% Similarity=0.639 Sum_probs=38.2
Q ss_pred CcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccc
Q 044575 13 KNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWL 52 (454)
Q Consensus 13 ~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~ 52 (454)
+||+|||||++||+||..|++.|++|+|+|+++.+||...
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~ 79 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSW 79 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCC
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcce
Confidence 7999999999999999999999999999999999999864
No 262
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.14 E-value=7.8e-06 Score=77.09 Aligned_cols=101 Identities=19% Similarity=0.233 Sum_probs=72.7
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKK 90 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (454)
..++|+|||+|+.|+.+|..|++.|.+|+++++.+.+.
T Consensus 153 ~~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~------------------------------------------ 190 (323)
T 3f8d_A 153 KNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFK------------------------------------------ 190 (323)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCC------------------------------------------
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCC------------------------------------------
Confidence 45789999999999999999999999999999875320
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEcc
Q 044575 91 GRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVAT 170 (454)
Q Consensus 91 ~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAt 170 (454)
...+ +++++.++.++. +.++++|.+++..+. ...|++.+..+++..++.+|.||+|+
T Consensus 191 --------~~~~---~~~~~~~~~gv~--~~~~~~v~~i~~~~~----------~~~v~~~~~~~g~~~~~~~D~vv~a~ 247 (323)
T 3f8d_A 191 --------AQPI---YVETVKKKPNVE--FVLNSVVKEIKGDKV----------VKQVVVENLKTGEIKELNVNGVFIEI 247 (323)
T ss_dssp --------SCHH---HHHHHHTCTTEE--EECSEEEEEEEESSS----------EEEEEEEETTTCCEEEEECSEEEECC
T ss_pred --------cCHH---HHHHHHhCCCcE--EEeCCEEEEEeccCc----------eeEEEEEECCCCceEEEEcCEEEEEE
Confidence 0012 233333334665 888999999986521 34577766333445578999999999
Q ss_pred CCCCCCCC
Q 044575 171 GHYSYPRL 178 (454)
Q Consensus 171 G~~~~p~~ 178 (454)
| ..|+.
T Consensus 248 G--~~p~~ 253 (323)
T 3f8d_A 248 G--FDPPT 253 (323)
T ss_dssp C--EECCH
T ss_pred C--CCCCh
Confidence 9 67764
No 263
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.12 E-value=1.8e-06 Score=85.78 Aligned_cols=47 Identities=21% Similarity=0.337 Sum_probs=41.9
Q ss_pred hhccCCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCccccc
Q 044575 7 QQCAQSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLY 53 (454)
Q Consensus 7 ~~~~~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~ 53 (454)
+.|++.+||+|||+|.+|+++|..|++.|.+|+++|+++.+||.+..
T Consensus 15 ~~~~~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~~s 61 (475)
T 3p1w_A 15 YFQGEHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGETAS 61 (475)
T ss_dssp --CCCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred ccccccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCccc
Confidence 34667799999999999999999999999999999999999998753
No 264
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=98.10 E-value=1.9e-06 Score=86.97 Aligned_cols=43 Identities=42% Similarity=0.628 Sum_probs=39.7
Q ss_pred cCCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccc
Q 044575 10 AQSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWL 52 (454)
Q Consensus 10 ~~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~ 52 (454)
...+||+|||||++||++|..|++.|.+|+|+|+++.+||.+.
T Consensus 31 ~~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~~ 73 (498)
T 2iid_A 31 SNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVR 73 (498)
T ss_dssp SSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcee
Confidence 3468999999999999999999999999999999999999764
No 265
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.09 E-value=5.7e-06 Score=76.98 Aligned_cols=147 Identities=16% Similarity=0.109 Sum_probs=86.3
Q ss_pred CeEEEEcCCCCHHHHHHHHhhh-cCeEEEecccCCcCc------------------------------------------
Q 044575 206 EVVVVVGNSLSGQDISMELVEV-AKEVHLSAKSLNISE------------------------------------------ 242 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~~-~~~V~l~~r~~~~~~------------------------------------------ 242 (454)
.+|+|||+|++|+.+|..|++. +.+|+++++.+.+..
T Consensus 40 ~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~ 119 (284)
T 1rp0_A 40 TDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHAA 119 (284)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESCHH
T ss_pred cCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcccCCCEEEecCHH
Confidence 4799999999999999999997 999999998764310
Q ss_pred ----cchhhhcc--CCCeEEcCceeEEecC-C---cEEEe---------CC-----CEEeeceEEEccCcccCCcCCC--
Q 044575 243 ----GLSKVISK--HNNLHLHPQIDCLRED-G---RVTFV---------DG-----CWVTADTILYCTGYSYSFPFLD-- 296 (454)
Q Consensus 243 ----~~~~~l~~--~~~i~~~~~v~~v~~~-~---~v~~~---------dG-----~~i~~D~vI~atG~~~~~~~l~-- 296 (454)
.+.+.+.+ ..+++.+..|+++..+ + .|.+. +| .++++|.||.|||..+.+....
T Consensus 120 ~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~~~~~~~ 199 (284)
T 1rp0_A 120 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFGATGVK 199 (284)
T ss_dssp HHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTTTTHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchHHHHHHHH
Confidence 00111112 2357777888888632 2 23443 32 4688999999999877653211
Q ss_pred ---CCC-ceeeCCCCcccccC--c-c--cCCCCCCCceEeccccc--------ccchhHHHHHHHHHHHHHcC
Q 044575 297 ---TKG-IVVVDDDRVGPLYE--H-T--FPPSLAPSLSFVGIPRK--------LIGFPFFESQAKWIAQLLSG 352 (454)
Q Consensus 297 ---~~g-~i~v~~~~~~~~~~--~-~--~~~~~~p~l~~iG~~~~--------~~~~~~a~~qa~~~a~~i~g 352 (454)
..+ .+.+.......... . + ...+..|++|+.|+... ++++..+..|++.+|..+..
T Consensus 200 ~~~~~g~~~~v~~~~g~~~~~~~~~~v~~~~~~~p~i~a~G~~~~~~~g~~~~gp~~~~~~~sG~~~a~~i~~ 272 (284)
T 1rp0_A 200 RLKSIGMIDHVPGMKALDMNTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAGQLALK 272 (284)
T ss_dssp HHHHTTSSSCCCCCEEECHHHHHHHHHHHCEEEETTEEECTHHHHHHHTCEECCSCCHHHHHHHHHHHHHHHH
T ss_pred HhhhccCCCCcCCcCCchhhhhhHHHhhccccccCCEEEEeeehhhhcCCCCcChHHHHHHHhHHHHHHHHHH
Confidence 000 00000000000000 0 0 00012489999987542 34566677788888776644
No 266
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.08 E-value=2.3e-06 Score=85.86 Aligned_cols=41 Identities=29% Similarity=0.472 Sum_probs=38.4
Q ss_pred CCcEEEECcChHHHHHHHHHHHcC--CcEEEEeeCCCCCcccc
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEG--HRVVVLEQNHDVGGQWL 52 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g--~~v~vie~~~~~GG~w~ 52 (454)
.+||+|||||++|+++|..|++.| .+|+|+|+++.+||.+.
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~ 46 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVA 46 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCC
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeE
Confidence 479999999999999999999999 99999999999999765
No 267
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.07 E-value=1.1e-05 Score=75.79 Aligned_cols=103 Identities=16% Similarity=0.156 Sum_probs=67.6
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKK 90 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (454)
..++|+|||||+.|+.+|..|++.|.+|+++++.+..
T Consensus 151 ~~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~------------------------------------------- 187 (314)
T 4a5l_A 151 RNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAF------------------------------------------- 187 (314)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC-------------------------------------------
T ss_pred CCCeEEEECCChHHHHHHHHHHHhCCeeeeecccccc-------------------------------------------
Confidence 3578999999999999999999999999999985421
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEcc
Q 044575 91 GRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVAT 170 (454)
Q Consensus 91 ~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAt 170 (454)
. .. .+. ........+. .......+..+...... .-.+.+.+...+...++.+|.|++|+
T Consensus 188 --~----~~-~~~---~~~~~~~~~~--~~~~~~~~~~i~~~~~~---------~~~~~~~~~~~~~~~~i~~d~vi~a~ 246 (314)
T 4a5l_A 188 --R----AS-KTM---QERVLNHPKI--EVIWNSELVELEGDGDL---------LNGAKIHNLVSGEYKVVPVAGLFYAI 246 (314)
T ss_dssp --C----SC-HHH---HHHHHTCTTE--EEECSEEEEEEEESSSS---------EEEEEEEETTTCCEEEEECSEEEECS
T ss_pred --c----cc-chh---hhhhhcccce--eeEeeeeeEEEEeeeec---------cceeEEeecccccceeeccccceEec
Confidence 0 00 111 1111111222 25566677777655432 23345554444456689999999999
Q ss_pred CCCCCCCCC
Q 044575 171 GHYSYPRLP 179 (454)
Q Consensus 171 G~~~~p~~p 179 (454)
| ..|+..
T Consensus 247 G--~~pn~~ 253 (314)
T 4a5l_A 247 G--HSPNSK 253 (314)
T ss_dssp C--EEESCG
T ss_pred c--cccChh
Confidence 9 777754
No 268
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.06 E-value=5.1e-06 Score=79.16 Aligned_cols=104 Identities=19% Similarity=0.207 Sum_probs=70.6
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKK 90 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (454)
..++|+|||+|+.|+.+|..|++.|.+|+++++.+.+. . .
T Consensus 154 ~~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~--------------------------~-----------~--- 193 (335)
T 2a87_A 154 RDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFR--------------------------A-----------S--- 193 (335)
T ss_dssp TTCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCS--------------------------S-----------C---
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCC--------------------------c-----------c---
Confidence 35789999999999999999999999999999875320 0 0
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEcc
Q 044575 91 GRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVAT 170 (454)
Q Consensus 91 ~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAt 170 (454)
+.+ ..++.++.++. +.++++|.+++..+. ...|.+.+..++...++.+|.||+|+
T Consensus 194 ----------~~~---~~~~~~~~gV~--v~~~~~v~~i~~~~~----------~~~v~~~~~~~g~~~~i~~D~vi~a~ 248 (335)
T 2a87_A 194 ----------KIM---LDRARNNDKIR--FLTNHTVVAVDGDTT----------VTGLRVRDTNTGAETTLPVTGVFVAI 248 (335)
T ss_dssp ----------TTH---HHHHHHCTTEE--EECSEEEEEEECSSS----------CCEEEEEEETTSCCEEECCSCEEECS
T ss_pred ----------HHH---HHHHhccCCcE--EEeCceeEEEecCCc----------EeEEEEEEcCCCceEEeecCEEEEcc
Confidence 011 11233345666 888999999875431 22355543222223478999999999
Q ss_pred CCCCCCCCCCC
Q 044575 171 GHYSYPRLPSI 181 (454)
Q Consensus 171 G~~~~p~~p~i 181 (454)
| ..|+..-+
T Consensus 249 G--~~p~~~~~ 257 (335)
T 2a87_A 249 G--HEPRSGLV 257 (335)
T ss_dssp C--EEECCTTT
T ss_pred C--CccChhHh
Confidence 9 67765433
No 269
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.05 E-value=7.9e-06 Score=76.80 Aligned_cols=102 Identities=17% Similarity=0.152 Sum_probs=72.0
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKK 90 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (454)
..++|+|||+|+.|+.+|..|++.+.+|+++++.+.+.
T Consensus 146 ~~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~------------------------------------------ 183 (315)
T 3r9u_A 146 KNKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFR------------------------------------------ 183 (315)
T ss_dssp TTSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCB------------------------------------------
T ss_pred CcCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCC------------------------------------------
Confidence 35789999999999999999999999999999875320
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEcc
Q 044575 91 GRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVAT 170 (454)
Q Consensus 91 ~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAt 170 (454)
...+ ++++..++.++. +.++++|.+++..++. ...|++.. .++...++.+|.||+|+
T Consensus 184 --------~~~~---~~~~~~~~~gv~--~~~~~~v~~i~~~~~~---------~~~v~~~~-~~g~~~~~~~D~vv~a~ 240 (315)
T 3r9u_A 184 --------AAPS---TVEKVKKNEKIE--LITSASVDEVYGDKMG---------VAGVKVKL-KDGSIRDLNVPGIFTFV 240 (315)
T ss_dssp --------SCHH---HHHHHHHCTTEE--EECSCEEEEEEEETTE---------EEEEEEEC-TTSCEEEECCSCEEECS
T ss_pred --------CCHH---HHHHHHhcCCeE--EEeCcEEEEEEcCCCc---------EEEEEEEc-CCCCeEEeecCeEEEEE
Confidence 0012 223334455666 8889999999865421 23355552 22344578899999999
Q ss_pred CCCCCCCCC
Q 044575 171 GHYSYPRLP 179 (454)
Q Consensus 171 G~~~~p~~p 179 (454)
| ..|+..
T Consensus 241 G--~~p~~~ 247 (315)
T 3r9u_A 241 G--LNVRNE 247 (315)
T ss_dssp C--EEECCG
T ss_pred c--CCCCch
Confidence 9 666654
No 270
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.05 E-value=2.2e-05 Score=74.29 Aligned_cols=100 Identities=16% Similarity=0.095 Sum_probs=73.3
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKKG 91 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (454)
.++|+|||+|+.|+.+|..|++.+.+|+++++.+.+.
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~------------------------------------------- 190 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFR------------------------------------------- 190 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCS-------------------------------------------
T ss_pred CCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCC-------------------------------------------
Confidence 4789999999999999999999999999999875320
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEccC
Q 044575 92 RDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVATG 171 (454)
Q Consensus 92 ~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAtG 171 (454)
...... +.+++.++. ++++++|.+++..+. ...|++.+..++...++.+|.||+|+|
T Consensus 191 -------~~~~~~----~~l~~~gv~--~~~~~~v~~i~~~~~----------~~~v~~~~~~~g~~~~~~~D~vv~a~G 247 (332)
T 3lzw_A 191 -------AHEHSV----ENLHASKVN--VLTPFVPAELIGEDK----------IEQLVLEEVKGDRKEILEIDDLIVNYG 247 (332)
T ss_dssp -------SCHHHH----HHHHHSSCE--EETTEEEEEEECSSS----------CCEEEEEETTSCCEEEEECSEEEECCC
T ss_pred -------ccHHHH----HHHhcCCeE--EEeCceeeEEecCCc----------eEEEEEEecCCCceEEEECCEEEEeec
Confidence 001111 123556777 888999999986532 345666664444556789999999999
Q ss_pred CCCCCCCC
Q 044575 172 HYSYPRLP 179 (454)
Q Consensus 172 ~~~~p~~p 179 (454)
..|+.+
T Consensus 248 --~~p~~~ 253 (332)
T 3lzw_A 248 --FVSSLG 253 (332)
T ss_dssp --EECCCG
T ss_pred --cCCCch
Confidence 677654
No 271
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=97.99 E-value=5.5e-06 Score=79.91 Aligned_cols=35 Identities=34% Similarity=0.517 Sum_probs=32.8
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
..+||+|||||++|+++|.+|++.|.+|+|+|+..
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 45899999999999999999999999999999975
No 272
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=97.99 E-value=1.3e-05 Score=75.15 Aligned_cols=90 Identities=21% Similarity=0.275 Sum_probs=60.9
Q ss_pred eEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCc------Ccc-----------ch----hhhccCC-CeEEcCceeEEe
Q 044575 207 VVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNI------SEG-----------LS----KVISKHN-NLHLHPQIDCLR 264 (454)
Q Consensus 207 ~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~------~~~-----------~~----~~l~~~~-~i~~~~~v~~v~ 264 (454)
.|+|||+|+.|+..|..+++.+.+|+++++...- .+. +. +.+.++. ..+....+..+.
T Consensus 8 DVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (304)
T 4fk1_A 8 DCAVIGAGPAGLNASLVLGRARKQIALFDNNTNRNRVTQNSHGFITRDGIKPEEFKEIGLNEVMKYPSVHYYEKTVVMIT 87 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCGGGGSSCBCCSTTCTTBCHHHHHHHHHHHHTTSTTEEEEECCEEEEE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCeeeeecCCccCCCCCCHHHHHHHHHHHHHhcCCEEEEeeEEEEee
Confidence 5999999999999999999999999999875321 000 00 1111222 223333444443
Q ss_pred c--CC--cEEEeCCCEEeeceEEEccCcccCCcCCC
Q 044575 265 E--DG--RVTFVDGCWVTADTILYCTGYSYSFPFLD 296 (454)
Q Consensus 265 ~--~~--~v~~~dG~~i~~D~vI~atG~~~~~~~l~ 296 (454)
. ++ .|.+.+|+++++|.||+|||.+|..|-+.
T Consensus 88 ~~~~~~~~v~~~~g~~~~a~~liiATGs~p~~p~i~ 123 (304)
T 4fk1_A 88 KQSTGLFEIVTKDHTKYLAERVLLATGMQEEFPSIP 123 (304)
T ss_dssp ECTTSCEEEEETTCCEEEEEEEEECCCCEEECCSCT
T ss_pred ecCCCcEEEEECCCCEEEeCEEEEccCCcccccccc
Confidence 2 22 57788999999999999999988765443
No 273
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.99 E-value=4.4e-06 Score=83.71 Aligned_cols=43 Identities=35% Similarity=0.593 Sum_probs=38.8
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCC-cEEEEeeCCCCCccccc
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGH-RVVVLEQNHDVGGQWLY 53 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~-~v~vie~~~~~GG~w~~ 53 (454)
..+||+|||||++|+++|..|.+.|. +|+|+|+++.+||.|..
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~~~ 46 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMHK 46 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSCE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCceee
Confidence 35799999999999999999999998 89999999999998764
No 274
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.98 E-value=3.2e-05 Score=78.38 Aligned_cols=101 Identities=22% Similarity=0.252 Sum_probs=71.0
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKKG 91 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (454)
.++|+|||+|.+|+.+|..|++.|.+|+++++.+.+.
T Consensus 355 ~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~------------------------------------------- 391 (521)
T 1hyu_A 355 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK------------------------------------------- 391 (521)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCC-------------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccC-------------------------------------------
Confidence 5789999999999999999999999999999875320
Q ss_pred CCCCCCCCHHHHHHHHHHHHHH-hCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEcc
Q 044575 92 RDVRRFPGHKELWLYLKDFCQR-FGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVAT 170 (454)
Q Consensus 92 ~~~~~~~~~~~~~~yl~~~~~~-~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViAt 170 (454)
.. .++.+...+ .++. +.++++|++|...++. -..|.+.+..++...++.+|.||+|+
T Consensus 392 -------~~----~~l~~~l~~~~gV~--v~~~~~v~~i~~~~~~---------v~~v~~~~~~~g~~~~i~~D~vi~a~ 449 (521)
T 1hyu_A 392 -------AD----QVLQDKVRSLKNVD--IILNAQTTEVKGDGSK---------VVGLEYRDRVSGDIHSVALAGIFVQI 449 (521)
T ss_dssp -------SC----HHHHHHHTTCTTEE--EECSEEEEEEEECSSS---------EEEEEEEETTTCCEEEEECSEEEECC
T ss_pred -------cC----HHHHHHHhcCCCcE--EEeCCEEEEEEcCCCc---------EEEEEEEeCCCCceEEEEcCEEEECc
Confidence 00 122222333 3555 8889999999764321 22466665433445678999999999
Q ss_pred CCCCCCCCC
Q 044575 171 GHYSYPRLP 179 (454)
Q Consensus 171 G~~~~p~~p 179 (454)
| ..|+..
T Consensus 450 G--~~pn~~ 456 (521)
T 1hyu_A 450 G--LLPNTH 456 (521)
T ss_dssp C--EEESCG
T ss_pred C--CCCCch
Confidence 9 666653
No 275
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=97.91 E-value=1.9e-05 Score=76.66 Aligned_cols=87 Identities=20% Similarity=0.258 Sum_probs=65.0
Q ss_pred CCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCcCc------------------cc----------------------
Q 044575 205 NEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNISE------------------GL---------------------- 244 (454)
Q Consensus 205 ~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~~~------------------~~---------------------- 244 (454)
..+|+|||+|++|+.+|..|++.|.+|+++++.+.... ++
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~~ 90 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMHNKS 90 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEETTEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeCCce
Confidence 36899999999999999999999999999998765411 00
Q ss_pred -------------------hhh----hc-cCCCeEEcCceeEEecCCcEEEeCCCEEeeceEEEccCcccC
Q 044575 245 -------------------SKV----IS-KHNNLHLHPQIDCLREDGRVTFVDGCWVTADTILYCTGYSYS 291 (454)
Q Consensus 245 -------------------~~~----l~-~~~~i~~~~~v~~v~~~~~v~~~dG~~i~~D~vI~atG~~~~ 291 (454)
.+. +. ..++++.+..|+++..++.|++.||+++++|.||.|+|....
T Consensus 91 ~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~v~~~~g~~~~ad~vV~AdG~~s~ 161 (379)
T 3alj_A 91 VSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADPVGRLTLQTGEVLEADLIVGADGVGSK 161 (379)
T ss_dssp EEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEETTTEEEETTSCEEECSEEEECCCTTCH
T ss_pred eeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEeCCEEEECCCCEEEcCEEEECCCccHH
Confidence 000 00 112466677788876433677888999999999999998754
No 276
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=97.88 E-value=1.5e-05 Score=76.28 Aligned_cols=83 Identities=17% Similarity=0.077 Sum_probs=60.3
Q ss_pred CeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCcC------------------------------------ccchhhh-
Q 044575 206 EVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNIS------------------------------------EGLSKVI- 248 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~~------------------------------------~~~~~~l- 248 (454)
.+|+|||+|++|+.+|..|++.+.+|+++++.+.+. ..+.+.+
T Consensus 4 ~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 83 (357)
T 4a9w_A 4 VDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLAYLA 83 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHHHHH
Confidence 479999999999999999999999999999886431 0011111
Q ss_pred ---cc-CCCeEEcCceeEEecCC-c---EEEeCCCEEeeceEEEccCcc
Q 044575 249 ---SK-HNNLHLHPQIDCLREDG-R---VTFVDGCWVTADTILYCTGYS 289 (454)
Q Consensus 249 ---~~-~~~i~~~~~v~~v~~~~-~---v~~~dG~~i~~D~vI~atG~~ 289 (454)
.+ ..+++.+..|+++..++ . |.+.+| ++++|.||+|||..
T Consensus 84 ~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g-~~~~d~vV~AtG~~ 131 (357)
T 4a9w_A 84 QYEQKYALPVLRPIRVQRVSHFGERLRVVARDGR-QWLARAVISATGTW 131 (357)
T ss_dssp HHHHHTTCCEECSCCEEEEEEETTEEEEEETTSC-EEEEEEEEECCCSG
T ss_pred HHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCC-EEEeCEEEECCCCC
Confidence 11 23567778888886443 2 555555 88999999999963
No 277
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.88 E-value=9.1e-06 Score=84.88 Aligned_cols=43 Identities=42% Similarity=0.638 Sum_probs=39.6
Q ss_pred cCCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccc
Q 044575 10 AQSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWL 52 (454)
Q Consensus 10 ~~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~ 52 (454)
...++|+|||||++|+++|..|.+.|++|+|+|+++.+||.+.
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~ 147 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVA 147 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTCC
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCCccc
Confidence 3458999999999999999999999999999999999999764
No 278
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.86 E-value=1.1e-05 Score=85.81 Aligned_cols=42 Identities=43% Similarity=0.657 Sum_probs=39.0
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccc
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWL 52 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~ 52 (454)
..++|+|||||++||+||..|.+.|++|+|||+++.+||.+.
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG~~~ 318 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVA 318 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCCcee
Confidence 457999999999999999999999999999999999999754
No 279
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.84 E-value=8.8e-06 Score=80.46 Aligned_cols=34 Identities=29% Similarity=0.456 Sum_probs=31.8
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
.+||+|||||++|+++|..|++.|++|+|||+.+
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 3789999999999999999999999999999976
No 280
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=97.83 E-value=3.4e-05 Score=75.33 Aligned_cols=34 Identities=15% Similarity=0.243 Sum_probs=31.5
Q ss_pred eEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCc
Q 044575 207 VVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNI 240 (454)
Q Consensus 207 ~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~ 240 (454)
+|+|||+|++|+=+|..|++.|.+|++++|.+.+
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~ 36 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAA 36 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSS
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCC
Confidence 7999999999999999999999999999986654
No 281
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.82 E-value=5.6e-05 Score=79.35 Aligned_cols=102 Identities=24% Similarity=0.107 Sum_probs=71.9
Q ss_pred CCcEEEEC--cChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCC
Q 044575 12 SKNVCVIG--AGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLK 89 (454)
Q Consensus 12 ~~~VvIIG--aG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (454)
.++|+||| +|+.|+.+|..|++.|.+|+++++.+.+.....
T Consensus 523 g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~~------------------------------------- 565 (690)
T 3k30_A 523 GKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWTN------------------------------------- 565 (690)
T ss_dssp SSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGGG-------------------------------------
T ss_pred CCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccccccccc-------------------------------------
Confidence 46799999 999999999999999999999998764321110
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEcCCCccccCCcCCcEEEEEeecCCCeEEEEEeCEEEEc
Q 044575 90 KGRDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGMLDCGELIIGNDLIKWVVKSKEKKADKVVEEVFDAVVVA 169 (454)
Q Consensus 90 ~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vViA 169 (454)
.......+.+.+++.++. +.++++|.+|+.. .-.+... .++...++.+|.||+|
T Consensus 566 ----------~~~~~~~l~~~l~~~GV~--i~~~~~V~~i~~~------------~~~v~~~--~~~~~~~i~aD~VV~A 619 (690)
T 3k30_A 566 ----------NTFEVNRIQRRLIENGVA--RVTDHAVVAVGAG------------GVTVRDT--YASIERELECDAVVMV 619 (690)
T ss_dssp ----------GGTCHHHHHHHHHHTTCE--EEESEEEEEEETT------------EEEEEET--TTCCEEEEECSEEEEE
T ss_pred ----------cchhHHHHHHHHHHCCCE--EEcCcEEEEEECC------------eEEEEEc--cCCeEEEEECCEEEEC
Confidence 011234556666777887 9999999998743 2223321 1123447899999999
Q ss_pred cCCCCCCCC
Q 044575 170 TGHYSYPRL 178 (454)
Q Consensus 170 tG~~~~p~~ 178 (454)
+| ..|+.
T Consensus 620 ~G--~~p~~ 626 (690)
T 3k30_A 620 TA--RLPRE 626 (690)
T ss_dssp SC--EEECC
T ss_pred CC--CCCCh
Confidence 99 66654
No 282
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=97.82 E-value=4e-05 Score=75.07 Aligned_cols=85 Identities=16% Similarity=0.322 Sum_probs=63.4
Q ss_pred CCCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCcCc------------------cc---------------------
Q 044575 204 RNEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNISE------------------GL--------------------- 244 (454)
Q Consensus 204 ~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~~~------------------~~--------------------- 244 (454)
+..+|+|||||++|+-+|..|++.|.+|+++++.+...+ ++
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 101 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGGPLRRMAYRDFRS 101 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSCCCCEEEEEETTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcCCCcceEEEECCC
Confidence 346899999999999999999999999999999765300 00
Q ss_pred --------------------------------hhhhccCCCeEEcCceeEEecCC---cEEEeCCCEEeeceEEEccCcc
Q 044575 245 --------------------------------SKVISKHNNLHLHPQIDCLREDG---RVTFVDGCWVTADTILYCTGYS 289 (454)
Q Consensus 245 --------------------------------~~~l~~~~~i~~~~~v~~v~~~~---~v~~~dG~~i~~D~vI~atG~~ 289 (454)
.+.+.+ .+++.++.|+++..++ .|++.||+++.+|.||.|.|..
T Consensus 102 g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~-~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~a~~vV~AdG~~ 180 (407)
T 3rp8_A 102 GENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR-DSVQFGKRVTRCEEDADGVTVWFTDGSSASGDLLIAADGSH 180 (407)
T ss_dssp CCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG-GGEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCCTT
T ss_pred CCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc-CEEEECCEEEEEEecCCcEEEEEcCCCEEeeCEEEECCCcC
Confidence 000011 3467778888886433 5677899999999999999976
No 283
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=97.79 E-value=8e-05 Score=74.29 Aligned_cols=36 Identities=17% Similarity=0.164 Sum_probs=32.9
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHD 46 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~ 46 (454)
..++|+|||+|.+|+-+|..|++.|.+|+++++++.
T Consensus 196 ~~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~ 231 (464)
T 2xve_A 196 KDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTA 231 (464)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCC
Confidence 357899999999999999999999999999998763
No 284
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=97.77 E-value=2.8e-05 Score=78.29 Aligned_cols=89 Identities=20% Similarity=0.259 Sum_probs=65.6
Q ss_pred CCCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCcC--------c-----------------------------cchh
Q 044575 204 RNEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNIS--------E-----------------------------GLSK 246 (454)
Q Consensus 204 ~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~~--------~-----------------------------~~~~ 246 (454)
...+|+|||||++|+.+|..|++.|.+|+++++.+.+. + .+.+
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~l~~ 170 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQL 170 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHHHHH
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHHHHHH
Confidence 45789999999999999999999999999999876541 0 0111
Q ss_pred hh----c-cCCCeEEcCceeEEecC---C---cEEEe---CC--CEEeeceEEEccCcccCC
Q 044575 247 VI----S-KHNNLHLHPQIDCLRED---G---RVTFV---DG--CWVTADTILYCTGYSYSF 292 (454)
Q Consensus 247 ~l----~-~~~~i~~~~~v~~v~~~---~---~v~~~---dG--~~i~~D~vI~atG~~~~~ 292 (454)
.+ . ..+.++.++.|+++..+ + .|.+. +| +++++|.||.|+|..+..
T Consensus 171 ~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~~ 232 (497)
T 2bry_A 171 LLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFVP 232 (497)
T ss_dssp HHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCCC
T ss_pred HHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCccc
Confidence 11 1 12467888889988742 2 45563 55 468899999999998764
No 285
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=97.76 E-value=5.6e-05 Score=71.70 Aligned_cols=34 Identities=24% Similarity=0.420 Sum_probs=31.4
Q ss_pred CeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCC
Q 044575 206 EVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLN 239 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~ 239 (454)
.+|+|||||.+|+-+|..|++.|.+|+++++.+.
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~ 36 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRG 36 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 4799999999999999999999999999998754
No 286
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=97.75 E-value=3.9e-05 Score=78.13 Aligned_cols=89 Identities=19% Similarity=0.226 Sum_probs=64.7
Q ss_pred CeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCcC--------cc-------------ch-------------------
Q 044575 206 EVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNIS--------EG-------------LS------------------- 245 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~~--------~~-------------~~------------------- 245 (454)
.+|+|||+|.+|+.+|..|.+.|.+|+++++.+.+. ++ +.
T Consensus 22 ~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~~~ei 101 (549)
T 4ap3_A 22 YDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQPEI 101 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCBHHHH
T ss_pred CCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCCHHHH
Confidence 579999999999999999999999999999965431 00 00
Q ss_pred -----hhhccCC---CeEEcCceeEEecC-C----cEEEeCCCEEeeceEEEccC--cccCCcC
Q 044575 246 -----KVISKHN---NLHLHPQIDCLRED-G----RVTFVDGCWVTADTILYCTG--YSYSFPF 294 (454)
Q Consensus 246 -----~~l~~~~---~i~~~~~v~~v~~~-~----~v~~~dG~~i~~D~vI~atG--~~~~~~~ 294 (454)
+...+.. .+..+..|+++..+ + .|.+.+|+++.+|.||+||| ..|..|-
T Consensus 102 ~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s~p~~p~ 165 (549)
T 4ap3_A 102 LAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLSNANTPA 165 (549)
T ss_dssp HHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSEEECCCCC
T ss_pred HHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCCCCCCCCC
Confidence 0011111 46777888887522 2 57788999999999999999 4555443
No 287
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=97.74 E-value=3e-05 Score=77.02 Aligned_cols=35 Identities=17% Similarity=0.204 Sum_probs=32.0
Q ss_pred CCeEEEEcCCCCHHHHHHHHhhhcC--eEEEecccCC
Q 044575 205 NEVVVVVGNSLSGQDISMELVEVAK--EVHLSAKSLN 239 (454)
Q Consensus 205 ~k~vvVVG~G~sg~e~A~~l~~~~~--~V~l~~r~~~ 239 (454)
.++|+|||+|++|+.+|..|++.|. +|+++++.+.
T Consensus 6 ~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~ 42 (447)
T 2gv8_A 6 IRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGS 42 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCC
Confidence 3689999999999999999999999 9999998753
No 288
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=97.73 E-value=7.3e-05 Score=72.93 Aligned_cols=87 Identities=21% Similarity=0.308 Sum_probs=63.5
Q ss_pred CCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCcCcc------c----hhhh--------------------c-----
Q 044575 205 NEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNISEG------L----SKVI--------------------S----- 249 (454)
Q Consensus 205 ~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~~~~------~----~~~l--------------------~----- 249 (454)
..+|+|||||++|+-+|..|++.|.+|+++++.+..... + .+.+ .
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~ 84 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDSISVPSSSMEYVDALTGE 84 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGGGTCBCCCEEEEEETTTCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCccccccccccceEEEecCCCC
Confidence 368999999999999999999999999999987653000 0 0000 0
Q ss_pred -------------------------cCCCeEEcCceeEEecCC---cEEEeCCCEEeeceEEEccCcccC
Q 044575 250 -------------------------KHNNLHLHPQIDCLREDG---RVTFVDGCWVTADTILYCTGYSYS 291 (454)
Q Consensus 250 -------------------------~~~~i~~~~~v~~v~~~~---~v~~~dG~~i~~D~vI~atG~~~~ 291 (454)
...+++.+..|+++..++ .|++.+|+++++|.||.|+|....
T Consensus 85 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~ 154 (397)
T 2vou_A 85 RVGSVPADWRFTSYDSIYGGLYELFGPERYHTSKCLVGLSQDSETVQMRFSDGTKAEANWVIGADGGASV 154 (397)
T ss_dssp EEEEEECCCCEEEHHHHHHHHHHHHCSTTEETTCCEEEEEECSSCEEEEETTSCEEEESEEEECCCTTCH
T ss_pred ccccccCcccccCHHHHHHHHHHhCCCcEEEcCCEEEEEEecCCEEEEEECCCCEEECCEEEECCCcchh
Confidence 013455667788876432 467788999999999999998743
No 289
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.73 E-value=0.0001 Score=69.30 Aligned_cols=35 Identities=26% Similarity=0.431 Sum_probs=32.5
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHD 46 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~ 46 (454)
.++|+|||||+.|+.+|..|++.|.+|+|+++.+.
T Consensus 145 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 179 (312)
T 4gcm_A 145 NKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDE 179 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEecccc
Confidence 47899999999999999999999999999998764
No 290
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.70 E-value=4.8e-05 Score=77.31 Aligned_cols=88 Identities=18% Similarity=0.215 Sum_probs=64.2
Q ss_pred CeEEEEcCCCCHHHHHHHHh-hhcCeEEEecccCCcC--------cc---------------------------------
Q 044575 206 EVVVVVGNSLSGQDISMELV-EVAKEVHLSAKSLNIS--------EG--------------------------------- 243 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~-~~~~~V~l~~r~~~~~--------~~--------------------------------- 243 (454)
.+|+|||+|++|+.+|..|+ +.|.+|+++++.+.+. +.
T Consensus 9 ~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~~e 88 (540)
T 3gwf_A 9 VDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYITQPE 88 (540)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEEEHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCCCHHH
Confidence 47999999999999999999 8999999999965431 00
Q ss_pred ch----hhhccCC---CeEEcCceeEEecCC-----cEEEeCCCEEeeceEEEccCc--ccCCc
Q 044575 244 LS----KVISKHN---NLHLHPQIDCLREDG-----RVTFVDGCWVTADTILYCTGY--SYSFP 293 (454)
Q Consensus 244 ~~----~~l~~~~---~i~~~~~v~~v~~~~-----~v~~~dG~~i~~D~vI~atG~--~~~~~ 293 (454)
+. +...+.. .+..++.|+++..+. .|.+.+|+++.+|.||.|||. .|..|
T Consensus 89 i~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s~p~~p 152 (540)
T 3gwf_A 89 ILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLSAINFP 152 (540)
T ss_dssp HHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCCSBCCC
T ss_pred HHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccccCCCC
Confidence 00 0011111 567788888876322 577888999999999999995 55544
No 291
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.68 E-value=2e-05 Score=75.46 Aligned_cols=34 Identities=29% Similarity=0.333 Sum_probs=31.4
Q ss_pred CcEEEECcChHHHHHHHHHHHcC------CcEEEEeeCCC
Q 044575 13 KNVCVIGAGPSGLVAARELRKEG------HRVVVLEQNHD 46 (454)
Q Consensus 13 ~~VvIIGaG~aGl~aA~~l~~~g------~~v~vie~~~~ 46 (454)
+||+|||||++|+++|.+|++.| .+|+|+|+...
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~ 40 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFT 40 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCG
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCC
Confidence 38999999999999999999998 89999999763
No 292
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.67 E-value=4.8e-05 Score=72.70 Aligned_cols=35 Identities=34% Similarity=0.388 Sum_probs=32.7
Q ss_pred CcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCC
Q 044575 13 KNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDV 47 (454)
Q Consensus 13 ~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~ 47 (454)
+||+|||||+||+.||..|++.|.+|+|+|+++..
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~ 36 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKR 36 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTS
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCc
Confidence 68999999999999999999999999999998744
No 293
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.66 E-value=5.8e-05 Score=76.80 Aligned_cols=89 Identities=15% Similarity=0.154 Sum_probs=62.5
Q ss_pred CeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCcC-------------------------c------cc----------
Q 044575 206 EVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNIS-------------------------E------GL---------- 244 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~~-------------------------~------~~---------- 244 (454)
.+|+|||+|++|+-+|..|.+.+.+|+++++.+.+. + ..
T Consensus 10 ~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~~~ei 89 (545)
T 3uox_A 10 LDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQPEM 89 (545)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCBHHHH
T ss_pred CCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCCHHHH
Confidence 579999999999999999999999999999976430 0 00
Q ss_pred hhh----hccC---CCeEEcCceeEEecCC-----cEEEeCCCEEeeceEEEccC--cccCCcC
Q 044575 245 SKV----ISKH---NNLHLHPQIDCLREDG-----RVTFVDGCWVTADTILYCTG--YSYSFPF 294 (454)
Q Consensus 245 ~~~----l~~~---~~i~~~~~v~~v~~~~-----~v~~~dG~~i~~D~vI~atG--~~~~~~~ 294 (454)
.+. ..+. ..+..+..|+++..+. .|.+.+|+++.+|.||+||| ..|..|-
T Consensus 90 ~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~p~~p~ 153 (545)
T 3uox_A 90 LRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLSASRMPD 153 (545)
T ss_dssp HHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSCBC---CC
T ss_pred HHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCCCCCcCCC
Confidence 000 0111 1466777888875321 57778898999999999999 4555443
No 294
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=97.64 E-value=8.1e-05 Score=72.58 Aligned_cols=35 Identities=14% Similarity=0.140 Sum_probs=31.8
Q ss_pred CeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCc
Q 044575 206 EVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNI 240 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~ 240 (454)
.+|+|||+|++|+-+|..|++.|.+|+++++.+..
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~ 41 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRE 41 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCC
Confidence 47999999999999999999999999999987543
No 295
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=97.60 E-value=3.6e-05 Score=77.98 Aligned_cols=33 Identities=15% Similarity=0.168 Sum_probs=31.2
Q ss_pred CeEEEEcCCCCHHHHHHHHhhhcCeEEEecccC
Q 044575 206 EVVVVVGNSLSGQDISMELVEVAKEVHLSAKSL 238 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~ 238 (454)
.+|+|||+|++|+-+|..|++.|.+|+++++.+
T Consensus 108 ~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~ 140 (549)
T 3nlc_A 108 ERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGK 140 (549)
T ss_dssp CCCEEECCSHHHHHHHHHHHHTTCCCEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCeEEEEEccC
Confidence 689999999999999999999999999999874
No 296
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=97.59 E-value=0.00021 Score=69.62 Aligned_cols=86 Identities=15% Similarity=0.227 Sum_probs=63.8
Q ss_pred CeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCcC-----------c-c----chh-----------------------
Q 044575 206 EVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNIS-----------E-G----LSK----------------------- 246 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~~-----------~-~----~~~----------------------- 246 (454)
.+|+|||+|++|+-+|..|++.|.+|+++++.+... + . +.+
T Consensus 27 ~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~g 106 (398)
T 2xdo_A 27 KNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGVNIADEKG 106 (398)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccceEEECCCC
Confidence 589999999999999999999999999999875321 0 0 000
Q ss_pred --------------------------hhcc---CCCeEEcCceeEEecCC---cEEEeCCCEEeeceEEEccCcccC
Q 044575 247 --------------------------VISK---HNNLHLHPQIDCLREDG---RVTFVDGCWVTADTILYCTGYSYS 291 (454)
Q Consensus 247 --------------------------~l~~---~~~i~~~~~v~~v~~~~---~v~~~dG~~i~~D~vI~atG~~~~ 291 (454)
.+.+ ...++.+..|+++..++ .|++.||+++++|.||.|+|....
T Consensus 107 ~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~ 183 (398)
T 2xdo_A 107 NILSTKNVKPENRFDNPEINRNDLRAILLNSLENDTVIWDRKLVMLEPGKKKWTLTFENKPSETADLVILANGGMSK 183 (398)
T ss_dssp EEEEECCCGGGTTSSCCEECHHHHHHHHHHTSCTTSEEESCCEEEEEECSSSEEEEETTSCCEEESEEEECSCTTCS
T ss_pred CchhhccccccCCCCCceECHHHHHHHHHhhcCCCEEEECCEEEEEEECCCEEEEEECCCcEEecCEEEECCCcchh
Confidence 0000 12467778888886443 467788988999999999998754
No 297
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=97.56 E-value=7.8e-05 Score=73.17 Aligned_cols=35 Identities=17% Similarity=0.223 Sum_probs=32.2
Q ss_pred CeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCc
Q 044575 206 EVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNI 240 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~ 240 (454)
.+|+|||||++|+.+|..+++.|.+|+++++.+..
T Consensus 28 ~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~ 62 (417)
T 3v76_A 28 QDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAP 62 (417)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 47999999999999999999999999999987753
No 298
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.55 E-value=0.00013 Score=72.51 Aligned_cols=35 Identities=26% Similarity=0.438 Sum_probs=31.5
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCC-cEEEEeeCC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGH-RVVVLEQNH 45 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~-~v~vie~~~ 45 (454)
..++|+|||||..|+-+|..+.+.|. +|+++++++
T Consensus 263 ~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~ 298 (456)
T 2vdc_G 263 AGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRD 298 (456)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCC
Confidence 35789999999999999999999998 599999875
No 299
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.47 E-value=0.00033 Score=76.20 Aligned_cols=97 Identities=16% Similarity=0.124 Sum_probs=70.4
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccccCCCCCCCCccccccccceecCCccccccCCCCCCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWLYDPNTDQTEVHSSVYASLRLTSPREIMGYTDFPFVLKKG 91 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (454)
.++|+|||+|+.|+.+|..|++.|.+|+|+|+.+.+
T Consensus 284 gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~-------------------------------------------- 319 (965)
T 2gag_A 284 GARIAVATTNDSAYELVRELAATGGVVAVIDARSSI-------------------------------------------- 319 (965)
T ss_dssp CSSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSC--------------------------------------------
T ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCcc--------------------------------------------
Confidence 368999999999999999999999999999987532
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCccEEeCeEEEEEEEc-CCCccccCCcCCcEEEEEee--cC--CCeEEEEEeCEE
Q 044575 92 RDVRRFPGHKELWLYLKDFCQRFGLREMIRFNTRVEYVGML-DCGELIIGNDLIKWVVKSKE--KK--ADKVVEEVFDAV 166 (454)
Q Consensus 92 ~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~-~~~~~~~~~~~~~~~v~~~~--~~--~~~~~~~~~d~v 166 (454)
. .. .+.+++.++. +++++.|.+|... ++. ...|++.+ .. ++...++.+|.|
T Consensus 320 -------~-~~-----~~~l~~~GV~--v~~~~~v~~i~~~~~~~---------v~~v~~~~~~~~~~~G~~~~i~~D~V 375 (965)
T 2gag_A 320 -------S-AA-----AAQAVADGVQ--VISGSVVVDTEADENGE---------LSAIVVAELDEARELGGTQRFEADVL 375 (965)
T ss_dssp -------C-HH-----HHHHHHTTCC--EEETEEEEEEEECTTSC---------EEEEEEEEECTTCCEEEEEEEECSEE
T ss_pred -------c-hh-----HHHHHhCCeE--EEeCCEeEEEeccCCCC---------EEEEEEEeccccCCCCceEEEEcCEE
Confidence 0 11 2334567888 9999999999863 211 22455554 10 122357899999
Q ss_pred EEccCCCCCCCC
Q 044575 167 VVATGHYSYPRL 178 (454)
Q Consensus 167 ViAtG~~~~p~~ 178 (454)
|+|+| ..|+.
T Consensus 376 v~a~G--~~P~~ 385 (965)
T 2gag_A 376 AVAGG--FNPVV 385 (965)
T ss_dssp EEECC--EEECC
T ss_pred EECCC--cCcCh
Confidence 99999 67764
No 300
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.46 E-value=4.1e-05 Score=79.49 Aligned_cols=36 Identities=22% Similarity=0.434 Sum_probs=34.0
Q ss_pred CCcEEEECcChHHHHHHHHHHHcC--------CcEEEEeeCC-CC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEG--------HRVVVLEQNH-DV 47 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g--------~~v~vie~~~-~~ 47 (454)
.++|+|||||++||+||..|.+.| ++|+|+|+++ .+
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 478999999999999999999998 9999999998 88
No 301
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.46 E-value=0.00064 Score=67.55 Aligned_cols=35 Identities=20% Similarity=0.280 Sum_probs=30.8
Q ss_pred CCcEEEECcChHHHHHHHHHH--------------------HcCC-cEEEEeeCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELR--------------------KEGH-RVVVLEQNHD 46 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~--------------------~~g~-~v~vie~~~~ 46 (454)
.++|+|||+|..|+.+|..|+ +.+. +|+|+++++.
T Consensus 145 ~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~ 200 (460)
T 1cjc_A 145 CDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGP 200 (460)
T ss_dssp SSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCG
T ss_pred CCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCCh
Confidence 578999999999999999998 5677 7999998763
No 302
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=97.45 E-value=0.00021 Score=72.74 Aligned_cols=84 Identities=24% Similarity=0.349 Sum_probs=61.2
Q ss_pred CeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCcC--------cc-------------chh------------------
Q 044575 206 EVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNIS--------EG-------------LSK------------------ 246 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~~--------~~-------------~~~------------------ 246 (454)
.+|+|||+|++|+-+|..|++.|.+|+++++.+.+. +. +..
T Consensus 17 ~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~~~~i 96 (542)
T 1w4x_A 17 VDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQPEI 96 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCBHHHH
T ss_pred CCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCCHHHH
Confidence 479999999999999999999999999999875430 00 000
Q ss_pred --hh----ccC---CCeEEcCceeEEecC---C--cEEEeCCCEEeeceEEEccCcc
Q 044575 247 --VI----SKH---NNLHLHPQIDCLRED---G--RVTFVDGCWVTADTILYCTGYS 289 (454)
Q Consensus 247 --~l----~~~---~~i~~~~~v~~v~~~---~--~v~~~dG~~i~~D~vI~atG~~ 289 (454)
.+ .+. ..+..++.|.++..+ + .|.+.+|+++.+|.||.|||..
T Consensus 97 ~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~ 153 (542)
T 1w4x_A 97 LRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQL 153 (542)
T ss_dssp HHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSC
T ss_pred HHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCCC
Confidence 00 111 246677888887532 1 4677789899999999999963
No 303
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=97.45 E-value=0.00018 Score=68.60 Aligned_cols=34 Identities=18% Similarity=0.167 Sum_probs=30.7
Q ss_pred CeEEEEcCCCCHHHHHHHHhh---hcCeEEEecccCC
Q 044575 206 EVVVVVGNSLSGQDISMELVE---VAKEVHLSAKSLN 239 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~---~~~~V~l~~r~~~ 239 (454)
++|+|||+|.+|+-+|..|++ .|.+|+++++++.
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~ 38 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADD 38 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCC
Confidence 379999999999999999999 8999999998643
No 304
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.42 E-value=0.00029 Score=74.28 Aligned_cols=34 Identities=24% Similarity=0.323 Sum_probs=31.6
Q ss_pred CCcEEEEC--cChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 12 SKNVCVIG--AGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 12 ~~~VvIIG--aG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
.++|+||| ||..|+.+|..|++.|.+|+++++.+
T Consensus 528 gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 528 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 46899999 99999999999999999999999875
No 305
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.36 E-value=0.00038 Score=72.79 Aligned_cols=29 Identities=28% Similarity=0.423 Sum_probs=25.7
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEE
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVV 40 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~v 40 (454)
.++|+|||||+.|+.+|..|++.|.+|++
T Consensus 494 ~~~VvVIGgG~~g~E~A~~l~~~G~~vtv 522 (671)
T 1ps9_A 494 GNKVAIIGCGGIGFDTAMYLSQPGESTSQ 522 (671)
T ss_dssp CSEEEEECCHHHHHHHHHHHTCCSSCGGG
T ss_pred CCeEEEECCChhHHHHHHHHHhcCCCccc
Confidence 47899999999999999999998876654
No 306
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.36 E-value=0.00017 Score=73.99 Aligned_cols=48 Identities=27% Similarity=0.508 Sum_probs=41.6
Q ss_pred CCCCchhhccCCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCCcccc
Q 044575 1 MVSDDHQQCAQSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVGGQWL 52 (454)
Q Consensus 1 m~~~~~~~~~~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~GG~w~ 52 (454)
||.+ |+..+||+|||+|..|...|..|++.|.+|++||+++++||.|.
T Consensus 1 m~~~----~~~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~~~ 48 (650)
T 1vg0_A 1 MADN----LPSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWA 48 (650)
T ss_dssp --CC----CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGC
T ss_pred CCcc----CCCcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCccc
Confidence 6643 33469999999999999999999999999999999999999875
No 307
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.35 E-value=0.00011 Score=74.41 Aligned_cols=36 Identities=22% Similarity=0.535 Sum_probs=32.3
Q ss_pred CCCcEEEECcChHHHHHHHHHHH-cCCcEEEEeeCCC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRK-EGHRVVVLEQNHD 46 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~-~g~~v~vie~~~~ 46 (454)
..+|+||||||+||+.+|.+|++ .+++|+|+|+.+.
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 46999999999999999999998 5789999999765
No 308
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=97.34 E-value=0.00017 Score=70.82 Aligned_cols=33 Identities=18% Similarity=0.179 Sum_probs=31.0
Q ss_pred CeEEEEcCCCCHHHHHHHHhhhcCeEEEecccC
Q 044575 206 EVVVVVGNSLSGQDISMELVEVAKEVHLSAKSL 238 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~ 238 (454)
.+|+|||||++|+-+|..|++.|.+|+++++.+
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~ 38 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQK 38 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 479999999999999999999999999999875
No 309
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.34 E-value=0.00078 Score=66.85 Aligned_cols=35 Identities=31% Similarity=0.429 Sum_probs=30.4
Q ss_pred CCcEEEECcChHHHHHHHHHHHc--------------------CC-cEEEEeeCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKE--------------------GH-RVVVLEQNHD 46 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~--------------------g~-~v~vie~~~~ 46 (454)
.++|+|||+|..|+.+|..|++. |. +|+|+++++.
T Consensus 147 ~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~ 202 (456)
T 1lqt_A 147 GARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGP 202 (456)
T ss_dssp SSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCCh
Confidence 57899999999999999999874 54 9999999763
No 310
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=97.27 E-value=0.00033 Score=68.33 Aligned_cols=34 Identities=18% Similarity=0.296 Sum_probs=31.3
Q ss_pred eEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCc
Q 044575 207 VVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNI 240 (454)
Q Consensus 207 ~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~ 240 (454)
+|+|||+|++|+.+|..+++.|.+|+++++.+.+
T Consensus 6 dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~ 39 (401)
T 2gqf_A 6 ENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKI 39 (401)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 6999999999999999999999999999987643
No 311
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=97.24 E-value=0.00036 Score=71.49 Aligned_cols=33 Identities=15% Similarity=0.364 Sum_probs=30.6
Q ss_pred CeEEEEcCCCCHHHHHHHHhhhcCeEEEecccC
Q 044575 206 EVVVVVGNSLSGQDISMELVEVAKEVHLSAKSL 238 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~ 238 (454)
-.|+|||||..|+++|..+++.|.+|.++++..
T Consensus 29 yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~ 61 (651)
T 3ces_A 29 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNI 61 (651)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CCEEEECChHHHHHHHHHHHhCCCCEEEEeecc
Confidence 479999999999999999999999999999863
No 312
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.23 E-value=0.0002 Score=72.94 Aligned_cols=36 Identities=33% Similarity=0.693 Sum_probs=33.5
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHD 46 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~ 46 (454)
..+|++|||||++|+.+|.+|++.|.+|+|+|+...
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~ 41 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGP 41 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 468999999999999999999999999999999764
No 313
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.23 E-value=0.0015 Score=71.56 Aligned_cols=34 Identities=26% Similarity=0.361 Sum_probs=31.1
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCC-cEEEEeeCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGH-RVVVLEQNH 45 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~-~v~vie~~~ 45 (454)
..+|+|||||..|+-+|..+++.|. +|+++++++
T Consensus 332 ~~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 332 RGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCcEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 3589999999999999999999997 899999865
No 314
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.22 E-value=8.6e-05 Score=75.44 Aligned_cols=36 Identities=31% Similarity=0.397 Sum_probs=33.2
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDV 47 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~ 47 (454)
..+|+||||||+||+.+|.+|++ |.+|+|+|+....
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~ 60 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLP 60 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCG
T ss_pred CcccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCc
Confidence 45899999999999999999999 9999999998764
No 315
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=97.14 E-value=0.00024 Score=72.25 Aligned_cols=47 Identities=23% Similarity=0.375 Sum_probs=39.4
Q ss_pred CCCCchhhcc-CCCcEEEECcChHHHHHHHHHHHc-CCcEEEEeeCCCC
Q 044575 1 MVSDDHQQCA-QSKNVCVIGAGPSGLVAARELRKE-GHRVVVLEQNHDV 47 (454)
Q Consensus 1 m~~~~~~~~~-~~~~VvIIGaG~aGl~aA~~l~~~-g~~v~vie~~~~~ 47 (454)
||-.+...|. ..+|++|||+|++|+.+|.+|++. |.+|+|+|+....
T Consensus 1 ~~~~~~~~~~~~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 1 MHIDNIENLSDREFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDD 49 (546)
T ss_dssp CEESCGGGCCCCEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCC
T ss_pred CccccccccccCcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcC
Confidence 6655555554 468999999999999999999998 8999999998654
No 316
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=97.10 E-value=0.00062 Score=69.52 Aligned_cols=33 Identities=15% Similarity=0.231 Sum_probs=30.5
Q ss_pred CeEEEEcCCCCHHHHHHHHhhhcCeEEEecccC
Q 044575 206 EVVVVVGNSLSGQDISMELVEVAKEVHLSAKSL 238 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~ 238 (454)
-.|+|||||..|+++|..+++.|.+|.++++..
T Consensus 28 yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~ 60 (637)
T 2zxi_A 28 FDVVVIGGGHAGIEAALAAARMGAKTAMFVLNA 60 (637)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEEecc
Confidence 369999999999999999999999999999863
No 317
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=97.09 E-value=0.00099 Score=68.29 Aligned_cols=34 Identities=18% Similarity=0.368 Sum_probs=31.7
Q ss_pred CCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccC
Q 044575 205 NEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSL 238 (454)
Q Consensus 205 ~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~ 238 (454)
..+|+|||||++|+-+|..|++.|.+|+++++.+
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~ 56 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSA 56 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCC
Confidence 3689999999999999999999999999999874
No 318
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=97.09 E-value=0.00064 Score=66.00 Aligned_cols=33 Identities=15% Similarity=0.172 Sum_probs=30.8
Q ss_pred eEEEEcCCCCHHHHHHHHhhhcCeEEEecccCC
Q 044575 207 VVVVVGNSLSGQDISMELVEVAKEVHLSAKSLN 239 (454)
Q Consensus 207 ~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~ 239 (454)
+|+|||+|++|+-+|..|++.|.+|+++++.+.
T Consensus 4 dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 36 (394)
T 1k0i_A 4 QVAIIGAGPSGLLLGQLLHKAGIDNVILERQTP 36 (394)
T ss_dssp SEEEECCSHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred cEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 699999999999999999999999999998763
No 319
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=97.08 E-value=0.00066 Score=69.51 Aligned_cols=33 Identities=21% Similarity=0.273 Sum_probs=30.8
Q ss_pred CeEEEEcCCCCHHHHHHHHhhhcCeEEEecccC
Q 044575 206 EVVVVVGNSLSGQDISMELVEVAKEVHLSAKSL 238 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~ 238 (454)
-.|+|||||..|+++|..+++.|.+|.++++..
T Consensus 22 yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~ 54 (641)
T 3cp8_A 22 YDVIVVGAGHAGCEAALAVARGGLHCLLITSDL 54 (641)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CCEEEECccHHHHHHHHHHHHCCCcEEEEEecc
Confidence 479999999999999999999999999999863
No 320
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=97.05 E-value=0.0002 Score=71.08 Aligned_cols=76 Identities=17% Similarity=0.214 Sum_probs=50.3
Q ss_pred CCCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCcCccchhhhccCCCeEEcCceeEEecCC--cEEEeCCCEEeece
Q 044575 204 RNEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNISEGLSKVISKHNNLHLHPQIDCLREDG--RVTFVDGCWVTADT 281 (454)
Q Consensus 204 ~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~~~~~~~~l~~~~~i~~~~~v~~v~~~~--~v~~~dG~~i~~D~ 281 (454)
.-++|+|+|||.+|.-+|..|.+ ..+|+++++.......+.+.+.+ ..-+.+|+ .-.+.....-++|.
T Consensus 234 ~~~~v~I~GgG~ig~~lA~~L~~-~~~v~iIE~d~~r~~~la~~l~~---------~~Vi~GD~td~~~L~ee~i~~~D~ 303 (461)
T 4g65_A 234 PYRRIMIVGGGNIGASLAKRLEQ-TYSVKLIERNLQRAEKLSEELEN---------TIVFCGDAADQELLTEENIDQVDV 303 (461)
T ss_dssp CCCEEEEECCSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHHHCTT---------SEEEESCTTCHHHHHHTTGGGCSE
T ss_pred cccEEEEEcchHHHHHHHHHhhh-cCceEEEecCHHHHHHHHHHCCC---------ceEEeccccchhhHhhcCchhhcE
Confidence 45899999999999999999865 47899999877665555554421 11122332 01112222345999
Q ss_pred EEEccCcc
Q 044575 282 ILYCTGYS 289 (454)
Q Consensus 282 vI~atG~~ 289 (454)
+|.+|+--
T Consensus 304 ~ia~T~~D 311 (461)
T 4g65_A 304 FIALTNED 311 (461)
T ss_dssp EEECCSCH
T ss_pred EEEcccCc
Confidence 99999975
No 321
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=97.03 E-value=0.00066 Score=66.36 Aligned_cols=34 Identities=18% Similarity=0.278 Sum_probs=31.6
Q ss_pred CeEEEEcCCCCHHHHHHHHhhhcCe-EEEecccCC
Q 044575 206 EVVVVVGNSLSGQDISMELVEVAKE-VHLSAKSLN 239 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~~~~~-V~l~~r~~~ 239 (454)
.+|+|||||++|+-+|..|++.|.+ |+++++.+.
T Consensus 5 ~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~ 39 (410)
T 3c96_A 5 IDILIAGAGIGGLSCALALHQAGIGKVTLLESSSE 39 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCC
Confidence 4799999999999999999999999 999998765
No 322
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=97.03 E-value=0.00081 Score=66.62 Aligned_cols=34 Identities=26% Similarity=0.245 Sum_probs=31.2
Q ss_pred CeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCC
Q 044575 206 EVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLN 239 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~ 239 (454)
..|+|||+|.+|+-+|..|++.|.+|+++++.+.
T Consensus 27 ~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~ 60 (447)
T 2i0z_A 27 YDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNK 60 (447)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 3699999999999999999999999999998764
No 323
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=96.99 E-value=0.00038 Score=71.06 Aligned_cols=36 Identities=19% Similarity=0.363 Sum_probs=32.9
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcC-CcEEEEeeCCC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEG-HRVVVLEQNHD 46 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g-~~v~vie~~~~ 46 (454)
+.+|+||||||.||+.+|.+|++.+ .+|+|+|+.+.
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 4589999999999999999999987 69999999875
No 324
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=96.97 E-value=0.00059 Score=69.99 Aligned_cols=37 Identities=24% Similarity=0.414 Sum_probs=33.7
Q ss_pred CCCcEEEECcChHHHHHHHHHHH-cCCcEEEEeeCCCC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRK-EGHRVVVLEQNHDV 47 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~-~g~~v~vie~~~~~ 47 (454)
..+|++|||+|++|+.+|.+|.+ .|.+|+|+|+....
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 46899999999999999999999 79999999997654
No 325
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=96.97 E-value=0.00055 Score=68.91 Aligned_cols=37 Identities=27% Similarity=0.310 Sum_probs=34.0
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHDVG 48 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~~G 48 (454)
.+|++|||+|++|+.+|..|.+.|.+|+|+|+....+
T Consensus 5 ~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~ 41 (504)
T 1n4w_A 5 YVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWN 41 (504)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 4899999999999999999999999999999987554
No 326
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=96.97 E-value=0.00075 Score=65.42 Aligned_cols=34 Identities=18% Similarity=0.138 Sum_probs=31.5
Q ss_pred CeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCC
Q 044575 206 EVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLN 239 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~ 239 (454)
-.|+|||||.+|+-+|..|++.|.+|+++++.+.
T Consensus 5 ~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~ 38 (397)
T 3cgv_A 5 YDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPE 38 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 3699999999999999999999999999999764
No 327
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=96.93 E-value=0.0013 Score=66.42 Aligned_cols=33 Identities=15% Similarity=0.204 Sum_probs=31.1
Q ss_pred CeEEEEcCCCCHHHHHHHHhhhcCeEEEecccC
Q 044575 206 EVVVVVGNSLSGQDISMELVEVAKEVHLSAKSL 238 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~ 238 (454)
.+|+|||||.+|+-+|..|++.|.+|+++++.+
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~ 40 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAMRGHRVLLLEREA 40 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCEEEEccCC
Confidence 479999999999999999999999999999876
No 328
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=96.92 E-value=0.0013 Score=62.95 Aligned_cols=33 Identities=21% Similarity=0.278 Sum_probs=31.0
Q ss_pred CeEEEEcCCCCHHHHHHHHhhhcCeEEEecccC
Q 044575 206 EVVVVVGNSLSGQDISMELVEVAKEVHLSAKSL 238 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~ 238 (454)
.+|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 5 ~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~~ 37 (369)
T 3dme_A 5 IDCIVIGAGVVGLAIARALAAGGHEVLVAEAAE 37 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 479999999999999999999999999999875
No 329
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=96.91 E-value=0.0017 Score=65.32 Aligned_cols=35 Identities=23% Similarity=0.177 Sum_probs=32.2
Q ss_pred CeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCc
Q 044575 206 EVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNI 240 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~ 240 (454)
.+|+|||+|++|+-+|..|++.|.+|+++++.+..
T Consensus 13 ~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~ 47 (499)
T 2qa2_A 13 ASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQR 47 (499)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 57999999999999999999999999999987654
No 330
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=96.87 E-value=0.00069 Score=68.27 Aligned_cols=37 Identities=30% Similarity=0.400 Sum_probs=33.9
Q ss_pred cCCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCC
Q 044575 10 AQSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHD 46 (454)
Q Consensus 10 ~~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~ 46 (454)
...+|++|||+|++|+.+|.+|.+.|.+|+|+|+...
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~ 45 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRS 45 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 4568999999999999999999999999999999764
No 331
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=96.85 E-value=0.00074 Score=68.93 Aligned_cols=35 Identities=26% Similarity=0.470 Sum_probs=32.3
Q ss_pred CCCcEEEECcChHHHHHHHHHHHc-CCcEEEEeeCC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKE-GHRVVVLEQNH 45 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~-g~~v~vie~~~ 45 (454)
+.+|+||||||.||+.+|.+|++. +.+|+|+|+.+
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 469999999999999999999975 78999999987
No 332
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=96.80 E-value=0.00059 Score=68.50 Aligned_cols=87 Identities=15% Similarity=0.134 Sum_probs=57.3
Q ss_pred CeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCcCcc----------c-----------hhhhccCCCeEEcCceeEEe
Q 044575 206 EVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNISEG----------L-----------SKVISKHNNLHLHPQIDCLR 264 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~~~~----------~-----------~~~l~~~~~i~~~~~v~~v~ 264 (454)
.+|+|||+|+.|+.+|..|++. .+|+++++.+.+... + .+.+....+++.+..+.++.
T Consensus 109 ~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~l~~~l~~~v~~~~~~~v~~i~ 187 (493)
T 1y56_A 109 VDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKLNENTKIYLETSALGVF 187 (493)
T ss_dssp ESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHHHHHTCCTTEEEETTEEECCCE
T ss_pred CCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeeccccccCCCCCCHHHHHHHHHHHHhcCCEEEcCCEEEEEE
Confidence 4799999999999999999999 999999987755110 0 01111112334444555444
Q ss_pred cCC-cEEE---eCCC--EEeeceEEEccCcccCCc
Q 044575 265 EDG-RVTF---VDGC--WVTADTILYCTGYSYSFP 293 (454)
Q Consensus 265 ~~~-~v~~---~dG~--~i~~D~vI~atG~~~~~~ 293 (454)
.++ .+.. .+++ .+.+|.+|+|||..|..+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa~~~~~ 222 (493)
T 1y56_A 188 DKGEYFLVPVVRGDKLIEILAKRVVLATGAIDSTM 222 (493)
T ss_dssp ECSSSEEEEEEETTEEEEEEESCEEECCCEEECCC
T ss_pred cCCcEEEEEEecCCeEEEEECCEEEECCCCCccCC
Confidence 332 2322 4454 578999999999987654
No 333
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=96.75 E-value=0.0018 Score=65.10 Aligned_cols=35 Identities=26% Similarity=0.280 Sum_probs=31.6
Q ss_pred CeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCc
Q 044575 206 EVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNI 240 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~ 240 (454)
.+|+|||+|++|+-+|..|++.|.+|+++++.+..
T Consensus 12 ~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~ 46 (500)
T 2qa1_A 12 AAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVER 46 (500)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 57999999999999999999999999999987654
No 334
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=96.74 E-value=0.00093 Score=68.27 Aligned_cols=35 Identities=26% Similarity=0.159 Sum_probs=31.5
Q ss_pred CeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCc
Q 044575 206 EVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNI 240 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~ 240 (454)
..|+|||+|++|+-+|..|++.|.+|+++++.+..
T Consensus 50 ~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~ 84 (570)
T 3fmw_A 50 TDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEP 84 (570)
T ss_dssp -CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCC
Confidence 46999999999999999999999999999987653
No 335
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=96.74 E-value=0.0012 Score=65.47 Aligned_cols=33 Identities=15% Similarity=0.277 Sum_probs=30.8
Q ss_pred eEEEEcCCCCHHHHHHHHhhhcCeEEEecccCC
Q 044575 207 VVVVVGNSLSGQDISMELVEVAKEVHLSAKSLN 239 (454)
Q Consensus 207 ~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~ 239 (454)
+|+|||||++|+-+|..|++.|.+|+++++.+.
T Consensus 8 dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~ 40 (453)
T 3atr_A 8 DVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPW 40 (453)
T ss_dssp SEEEECCSHHHHHHHHHHSSSSCCEEEECSSCG
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 699999999999999999999999999998754
No 336
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=96.73 E-value=0.0026 Score=66.55 Aligned_cols=33 Identities=15% Similarity=0.265 Sum_probs=31.0
Q ss_pred CeEEEEcCCCCHHHHHHHHhhhcCeEEEecccC
Q 044575 206 EVVVVVGNSLSGQDISMELVEVAKEVHLSAKSL 238 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~ 238 (454)
.+|+|||||.+|+-+|..|++.|.+|+++++.+
T Consensus 273 ~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~ 305 (676)
T 3ps9_A 273 REAAIIGGGIASALLSLALLRRGWQVTLYCADE 305 (676)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 689999999999999999999999999999853
No 337
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=96.67 E-value=0.0012 Score=63.50 Aligned_cols=32 Identities=16% Similarity=0.226 Sum_probs=29.8
Q ss_pred CeEEEEcCCCCHHHHHHHHhhhcCeEEEecccC
Q 044575 206 EVVVVVGNSLSGQDISMELVEVAKEVHLSAKSL 238 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~ 238 (454)
++|+|||+|.+|+-+|..|+ .|.+|+++++.+
T Consensus 10 ~dv~IIGaGi~Gls~A~~La-~G~~V~vlE~~~ 41 (381)
T 3nyc_A 10 ADYLVIGAGIAGASTGYWLS-AHGRVVVLEREA 41 (381)
T ss_dssp CSEEEECCSHHHHHHHHHHT-TTSCEEEECSSS
T ss_pred CCEEEECCcHHHHHHHHHHh-CCCCEEEEECCC
Confidence 68999999999999999999 599999999875
No 338
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=96.61 E-value=0.00075 Score=68.70 Aligned_cols=36 Identities=33% Similarity=0.411 Sum_probs=32.7
Q ss_pred CCcEEEECcChHHHHHHHHHHH-cCCcEEEEeeCCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRK-EGHRVVVLEQNHDV 47 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~-~g~~v~vie~~~~~ 47 (454)
.+|++|||||.||+.+|.+|++ .+.+|+|+|+.+..
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 4899999999999999999998 68999999997654
No 339
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=96.57 E-value=0.0033 Score=60.50 Aligned_cols=33 Identities=30% Similarity=0.503 Sum_probs=30.5
Q ss_pred CeEEEEcCCCCHHHHHHHHhhhcCeEEEecccC
Q 044575 206 EVVVVVGNSLSGQDISMELVEVAKEVHLSAKSL 238 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~ 238 (454)
.+|+|||+|.+|+-+|..|++.|.+|+++++..
T Consensus 6 ~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~~ 38 (382)
T 1y56_B 6 SEIVVIGGGIVGVTIAHELAKRGEEVTVIEKRF 38 (382)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 469999999999999999999999999999863
No 340
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=96.57 E-value=0.0031 Score=64.13 Aligned_cols=35 Identities=11% Similarity=0.206 Sum_probs=31.9
Q ss_pred CeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCc
Q 044575 206 EVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNI 240 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~ 240 (454)
.+|+|||+|++|+-+|..|++.|.+|+++++.+..
T Consensus 27 ~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~ 61 (549)
T 2r0c_A 27 TDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGT 61 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 37999999999999999999999999999987644
No 341
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=96.56 E-value=0.0028 Score=63.73 Aligned_cols=35 Identities=14% Similarity=0.170 Sum_probs=31.6
Q ss_pred CeEEEEcCCCCHHHHHHHHhhh-cCeEEEecccCCc
Q 044575 206 EVVVVVGNSLSGQDISMELVEV-AKEVHLSAKSLNI 240 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~~-~~~V~l~~r~~~~ 240 (454)
-.|+|||||.+|+-+|..|++. |.+|+++++++++
T Consensus 11 ~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~ 46 (513)
T 4gde_A 11 VDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETP 46 (513)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSC
T ss_pred CCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCC
Confidence 4699999999999999999985 8999999988766
No 342
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=96.54 E-value=0.0034 Score=60.48 Aligned_cols=34 Identities=21% Similarity=0.204 Sum_probs=31.4
Q ss_pred eEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCc
Q 044575 207 VVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNI 240 (454)
Q Consensus 207 ~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~ 240 (454)
.|+|||||++|+-+|..|++.|.+|++++|.+.+
T Consensus 6 DViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~ 39 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEI 39 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSSST
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 4999999999999999999999999999987654
No 343
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=96.53 E-value=0.0041 Score=63.54 Aligned_cols=34 Identities=26% Similarity=0.283 Sum_probs=31.3
Q ss_pred CeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCC
Q 044575 206 EVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLN 239 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~ 239 (454)
-.|+|||+|.+|+-+|..+++.|.+|+++++.+.
T Consensus 122 ~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~ 155 (566)
T 1qo8_A 122 TQVLVVGAGSAGFNASLAAKKAGANVILVDKAPF 155 (566)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 3799999999999999999999999999998764
No 344
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=96.51 E-value=0.0028 Score=64.20 Aligned_cols=35 Identities=26% Similarity=0.312 Sum_probs=32.1
Q ss_pred CeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCc
Q 044575 206 EVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNI 240 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~ 240 (454)
.+|+|||||++|+-+|..|++.|.+|+++++.+..
T Consensus 6 ~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~ 40 (535)
T 3ihg_A 6 VDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGL 40 (535)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSC
T ss_pred CcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 47999999999999999999999999999987643
No 345
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=96.49 E-value=0.0047 Score=64.67 Aligned_cols=33 Identities=12% Similarity=0.220 Sum_probs=31.0
Q ss_pred CeEEEEcCCCCHHHHHHHHhhhcCeEEEecccC
Q 044575 206 EVVVVVGNSLSGQDISMELVEVAKEVHLSAKSL 238 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~ 238 (454)
.+|+|||||.+|+-+|..|++.|.+|+++++.+
T Consensus 265 ~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~ 297 (689)
T 3pvc_A 265 DDIAIIGGGIVSALTALALQRRGAVVTLYCADA 297 (689)
T ss_dssp SSEEEECCSHHHHHHHHHHHTTTCCEEEEESSS
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 679999999999999999999999999999864
No 346
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=96.48 E-value=0.0053 Score=59.51 Aligned_cols=33 Identities=18% Similarity=0.184 Sum_probs=30.5
Q ss_pred CeEEEEcCCCCHHHHHHHHhh-hc-CeEEEecccC
Q 044575 206 EVVVVVGNSLSGQDISMELVE-VA-KEVHLSAKSL 238 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~-~~-~~V~l~~r~~ 238 (454)
.+|+|||+|.+|+-+|..|++ .| .+|+++++.+
T Consensus 22 ~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~ 56 (405)
T 2gag_B 22 YDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGW 56 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 479999999999999999999 89 8999999864
No 347
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=96.41 E-value=0.01 Score=59.47 Aligned_cols=36 Identities=22% Similarity=0.437 Sum_probs=31.1
Q ss_pred CCCcEEEECcChHHHHHHHHHHHc--CCcEEEEeeCCC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKE--GHRVVVLEQNHD 46 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~--g~~v~vie~~~~ 46 (454)
..++|+|||+|.+|...+..|++. +.+|+++-|++.
T Consensus 245 ~gKrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~~ 282 (501)
T 4b63_A 245 KPYNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDSA 282 (501)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSSS
T ss_pred CCcEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCCc
Confidence 357899999999999999999875 679999998763
No 348
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=96.30 E-value=0.0068 Score=61.96 Aligned_cols=35 Identities=29% Similarity=0.278 Sum_probs=31.9
Q ss_pred CeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCc
Q 044575 206 EVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNI 240 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~ 240 (454)
..|+|||+|.+|+.+|..+++.|.+|+++++.+..
T Consensus 127 ~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~ 161 (571)
T 1y0p_A 127 VDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVI 161 (571)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 47999999999999999999999999999987644
No 349
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.20 E-value=0.0041 Score=54.88 Aligned_cols=77 Identities=13% Similarity=0.138 Sum_probs=51.1
Q ss_pred CCCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCcCccchhhhccCCCeEEcCceeEEecCCcEEEeCCCEEeece
Q 044575 202 PFRNEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNISEGLSKVISKHNNLHLHPQIDCLREDGRVTFVDGCWVTADT 281 (454)
Q Consensus 202 ~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~~~~~~~~l~~~~~i~~~~~v~~v~~~~~v~~~dG~~i~~D~ 281 (454)
+..+++|+|||||.+|...+..|.+.|.+|+++.+. ..+.+.++... .. ++-+. .. +.++..-.+|+
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~--~~~~l~~l~~~-~~------i~~i~-~~---~~~~dL~~adL 94 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT--VSAEINEWEAK-GQ------LRVKR-KK---VGEEDLLNVFF 94 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS--CCHHHHHHHHT-TS------CEEEC-SC---CCGGGSSSCSE
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC--CCHHHHHHHHc-CC------cEEEE-CC---CCHhHhCCCCE
Confidence 357899999999999999999999999999999864 33444443322 11 21111 10 11111223999
Q ss_pred EEEccCcccC
Q 044575 282 ILYCTGYSYS 291 (454)
Q Consensus 282 vI~atG~~~~ 291 (454)
||.|||-...
T Consensus 95 VIaAT~d~~~ 104 (223)
T 3dfz_A 95 IVVATNDQAV 104 (223)
T ss_dssp EEECCCCTHH
T ss_pred EEECCCCHHH
Confidence 9999998643
No 350
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.08 E-value=0.0062 Score=50.53 Aligned_cols=34 Identities=35% Similarity=0.579 Sum_probs=31.6
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
..+|+|||+|.-|..+|..|.+.|.+|+++|+++
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4689999999999999999999999999999864
No 351
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.08 E-value=0.0071 Score=49.23 Aligned_cols=34 Identities=21% Similarity=0.364 Sum_probs=31.9
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
..+|+|||+|.-|...|..|.+.|++|+++|+++
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 4689999999999999999999999999999975
No 352
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=96.07 E-value=0.0033 Score=56.77 Aligned_cols=34 Identities=24% Similarity=0.421 Sum_probs=31.7
Q ss_pred eEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCc
Q 044575 207 VVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNI 240 (454)
Q Consensus 207 ~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~ 240 (454)
.|+|||+|++|+-+|..|++.|.+|+++++.+.+
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~ 37 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGS 37 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 5999999999999999999999999999987654
No 353
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=96.03 E-value=0.0084 Score=49.58 Aligned_cols=33 Identities=18% Similarity=0.272 Sum_probs=30.9
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQN 44 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~ 44 (454)
..+|+|+|+|.-|...|..|.+.|++|+++|++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 367999999999999999999999999999986
No 354
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=95.99 E-value=0.0083 Score=62.18 Aligned_cols=35 Identities=14% Similarity=0.175 Sum_probs=31.7
Q ss_pred CeEEEEcCCCCHHHHHHHHhh-hcCeEEEecccCCc
Q 044575 206 EVVVVVGNSLSGQDISMELVE-VAKEVHLSAKSLNI 240 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~-~~~~V~l~~r~~~~ 240 (454)
-.|+|||+|++|+-+|..|++ .|.+|+++++.+..
T Consensus 33 ~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~ 68 (639)
T 2dkh_A 33 VDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGP 68 (639)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSC
T ss_pred CcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 479999999999999999999 99999999987643
No 355
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.96 E-value=0.0081 Score=48.83 Aligned_cols=33 Identities=27% Similarity=0.513 Sum_probs=31.2
Q ss_pred CcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 13 KNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 13 ~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
++|+|+|+|.-|...|..|.+.|++|+++|+++
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 589999999999999999999999999999865
No 356
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=95.89 E-value=0.009 Score=56.38 Aligned_cols=35 Identities=14% Similarity=0.236 Sum_probs=31.3
Q ss_pred CeEEEEcCCCCHHHHHHHHhhh--cCeEEEecccCCc
Q 044575 206 EVVVVVGNSLSGQDISMELVEV--AKEVHLSAKSLNI 240 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~~--~~~V~l~~r~~~~ 240 (454)
-.|+|||+|++|+-+|..|++. |.+|+++++.+.+
T Consensus 80 ~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~ 116 (344)
T 3jsk_A 80 TDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAP 116 (344)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSC
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCcc
Confidence 3699999999999999999997 9999999987543
No 357
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=95.88 E-value=0.023 Score=59.94 Aligned_cols=35 Identities=17% Similarity=0.277 Sum_probs=31.7
Q ss_pred CCCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccC
Q 044575 204 RNEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSL 238 (454)
Q Consensus 204 ~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~ 238 (454)
.+.+|+|||+|.+|+-.|..|++.|.+|+++++.+
T Consensus 335 ~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~ 369 (776)
T 4gut_A 335 HNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKD 369 (776)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEeccc
Confidence 34789999999999999999999999999998754
No 358
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.88 E-value=0.0083 Score=48.42 Aligned_cols=33 Identities=24% Similarity=0.565 Sum_probs=30.7
Q ss_pred CcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 13 KNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 13 ~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
++|+|||+|.-|...|..|.+.|++|+++|+++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 579999999999999999999999999999864
No 359
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.74 E-value=0.0087 Score=46.67 Aligned_cols=33 Identities=33% Similarity=0.548 Sum_probs=30.6
Q ss_pred CcEEEECcChHHHHHHHHHHHcC-CcEEEEeeCC
Q 044575 13 KNVCVIGAGPSGLVAARELRKEG-HRVVVLEQNH 45 (454)
Q Consensus 13 ~~VvIIGaG~aGl~aA~~l~~~g-~~v~vie~~~ 45 (454)
++|+|+|+|..|..++..|.+.| ++|+++++++
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 57999999999999999999999 8999999864
No 360
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=95.66 E-value=0.024 Score=51.93 Aligned_cols=150 Identities=13% Similarity=0.122 Sum_probs=0.0
Q ss_pred CCCCCeEEEEcCCCCHHHHHHHHhhhcC-eEEEecccCCcCccchhhhccCCCeEEcCceeEEecCCcEEEeCCCEEeec
Q 044575 202 PFRNEVVVVVGNSLSGQDISMELVEVAK-EVHLSAKSLNISEGLSKVISKHNNLHLHPQIDCLREDGRVTFVDGCWVTAD 280 (454)
Q Consensus 202 ~~~~k~vvVVG~G~sg~e~A~~l~~~~~-~V~l~~r~~~~~~~~~~~l~~~~~i~~~~~v~~v~~~~~v~~~dG~~i~~D 280 (454)
...+++++|+|+|-.|.-++..|.+.|. +|+++.|+......+.+.+ ..+.+.+=..+++|
T Consensus 119 ~~~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~------------------~~~~~~~l~~l~~D 180 (282)
T 3fbt_A 119 EIKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEF------------------KVISYDELSNLKGD 180 (282)
T ss_dssp CCTTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTS------------------EEEEHHHHTTCCCS
T ss_pred CccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhc------------------CcccHHHHHhccCC
Q ss_pred eEEEcc--CcccCCcCCCCCCceeeCCCCcccccCcccCCCCCCCceEe-----cccccccchhHHHHHHHHHHHHHcCC
Q 044575 281 TILYCT--GYSYSFPFLDTKGIVVVDDDRVGPLYEHTFPPSLAPSLSFV-----GIPRKLIGFPFFESQAKWIAQLLSGK 353 (454)
Q Consensus 281 ~vI~at--G~~~~~~~l~~~g~i~v~~~~~~~~~~~~~~~~~~p~l~~i-----G~~~~~~~~~~a~~qa~~~a~~i~g~ 353 (454)
.||-|| |..|+.+-.. -..-.+..... .|+-++.+. +.-+.- | +.......+...||...-+.|.|+
T Consensus 181 ivInaTp~Gm~~~~~~~p-i~~~~l~~~~~--v~DlvY~P~--~T~ll~~A~~~G-~~~~~Gl~MLv~Qa~~~f~lwtg~ 254 (282)
T 3fbt_A 181 VIINCTPKGMYPKEGESP-VDKEVVAKFSS--AVDLIYNPV--ETLFLKYARESG-VKAVNGLYMLVSQAAASEEIWNDI 254 (282)
T ss_dssp EEEECSSTTSTTSTTCCS-SCHHHHTTCSE--EEESCCSSS--SCHHHHHHHHTT-CEEECSHHHHHHHHHHHHHHHHTC
T ss_pred EEEECCccCccCCCccCC-CCHHHcCCCCE--EEEEeeCCC--CCHHHHHHHHCc-CeEeCcHHHHHHHHHHHHHHHcCC
Q ss_pred CCCCCHHHHHHHHHHHHhhhhhcC
Q 044575 354 RTLPSWDQMMQSVKEFYHSRDVAG 377 (454)
Q Consensus 354 ~~lp~~~~~~~~~~~~~~~~~~~~ 377 (454)
.|+.+.|.+.+.......+..|
T Consensus 255 --~~~~~~~~~~~~~~~~~~~~~~ 276 (282)
T 3fbt_A 255 --SIDEIIVDEIFEVLEEKIKSEG 276 (282)
T ss_dssp --CCCHHHHHHHHHHHHHHHHC--
T ss_pred --CCCHHHHHHHHHHHHHhhhccc
No 361
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.52 E-value=0.011 Score=58.35 Aligned_cols=81 Identities=15% Similarity=0.152 Sum_probs=54.7
Q ss_pred CCCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCcCccchhhhccCC-CeEEcCceeEEecCCcEEEeCCCE-Ee-
Q 044575 202 PFRNEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNISEGLSKVISKHN-NLHLHPQIDCLREDGRVTFVDGCW-VT- 278 (454)
Q Consensus 202 ~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~~~~~~~~l~~~~-~i~~~~~v~~v~~~~~v~~~dG~~-i~- 278 (454)
++++|+|+|||.|.+|+-+|..|.+.|.+|+.+.+++...+...+.+.+.+ .+..+.. ..+. -.
T Consensus 6 ~~~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g~~-------------~~~~~~~~ 72 (451)
T 3lk7_A 6 TFENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVVCGSH-------------PLELLDED 72 (451)
T ss_dssp TTTTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTCEEEESCC-------------CGGGGGSC
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCCEEEECCC-------------hHHhhcCC
Confidence 457899999999999999999999999999999986532222223333221 1211111 0001 12
Q ss_pred eceEEEccCcccCCcCC
Q 044575 279 ADTILYCTGYSYSFPFL 295 (454)
Q Consensus 279 ~D~vI~atG~~~~~~~l 295 (454)
+|.||.++|..++.|.+
T Consensus 73 ~d~vv~spgi~~~~p~~ 89 (451)
T 3lk7_A 73 FCYMIKNPGIPYNNPMV 89 (451)
T ss_dssp EEEEEECTTSCTTSHHH
T ss_pred CCEEEECCcCCCCChhH
Confidence 89999999999887764
No 362
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=95.37 E-value=0.021 Score=58.28 Aligned_cols=35 Identities=20% Similarity=0.203 Sum_probs=31.7
Q ss_pred CeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCc
Q 044575 206 EVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNI 240 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~ 240 (454)
.+|+|||+|.+|+..|..+++.|.+|+++++.+..
T Consensus 127 ~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~ 161 (572)
T 1d4d_A 127 TDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIP 161 (572)
T ss_dssp CSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCC
Confidence 57999999999999999999999999999987643
No 363
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=95.32 E-value=0.017 Score=46.80 Aligned_cols=33 Identities=36% Similarity=0.580 Sum_probs=30.7
Q ss_pred CcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 13 KNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 13 ~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
++|+|+|+|.-|...|..|.+.|++|+++|+++
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 579999999999999999999999999999854
No 364
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=95.24 E-value=0.018 Score=50.73 Aligned_cols=34 Identities=21% Similarity=0.416 Sum_probs=31.8
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQN 44 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~ 44 (454)
+.++|+|||||..|...|..|.+.|.+|+|++++
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 4689999999999999999999999999999975
No 365
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.17 E-value=0.016 Score=47.92 Aligned_cols=43 Identities=14% Similarity=0.135 Sum_probs=34.3
Q ss_pred CCCCCCCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCc
Q 044575 198 RVPEPFRNEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNI 240 (454)
Q Consensus 198 ~~~~~~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~ 240 (454)
.-++...+++|+|+|+|..|..+|..|...|.+|+++.|++..
T Consensus 12 ~~~~~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~ 54 (155)
T 2g1u_A 12 HMSKKQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYA 54 (155)
T ss_dssp -----CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGG
T ss_pred hhhcccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHH
Confidence 3455567789999999999999999999999999999987643
No 366
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=95.14 E-value=0.0081 Score=60.16 Aligned_cols=35 Identities=17% Similarity=0.248 Sum_probs=30.9
Q ss_pred CeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCc
Q 044575 206 EVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNI 240 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~ 240 (454)
|+|+|||+|.+|+-.|..|++.|.+|+++++++.+
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~ 36 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKP 36 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC---
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCC
Confidence 68999999999999999999999999999998765
No 367
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.09 E-value=0.022 Score=48.49 Aligned_cols=34 Identities=29% Similarity=0.388 Sum_probs=31.5
Q ss_pred CCcEEEECcChHHHHHHHHHHHc-CCcEEEEeeCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKE-GHRVVVLEQNH 45 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~-g~~v~vie~~~ 45 (454)
..+|+|||+|..|..+|+.|.+. |++|+++|+++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 45899999999999999999999 99999999865
No 368
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=95.06 E-value=0.021 Score=52.54 Aligned_cols=33 Identities=30% Similarity=0.354 Sum_probs=31.2
Q ss_pred CcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 13 KNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 13 ~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
++|.|||+|.-|...|..|++.|++|+++|+++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 689999999999999999999999999999865
No 369
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=94.92 E-value=0.019 Score=52.35 Aligned_cols=35 Identities=23% Similarity=0.464 Sum_probs=32.3
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
+.++|+|||||..|...|..|.+.|.+|+||++..
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 46889999999999999999999999999999854
No 370
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=94.81 E-value=0.02 Score=53.06 Aligned_cols=37 Identities=19% Similarity=0.180 Sum_probs=32.0
Q ss_pred ccCCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 9 CAQSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 9 ~~~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
|+..++|.|||.|.-|...|..|++.|++|+++|+++
T Consensus 12 M~~~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 48 (296)
T 3qha_A 12 TTEQLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRI 48 (296)
T ss_dssp ---CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSST
T ss_pred ccCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4445789999999999999999999999999999875
No 371
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=94.69 E-value=0.03 Score=53.86 Aligned_cols=35 Identities=29% Similarity=0.413 Sum_probs=32.3
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
...+|+|||+|..|+.+|+.++..|.+|+++|+++
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 34789999999999999999999999999999876
No 372
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=94.60 E-value=0.028 Score=55.46 Aligned_cols=35 Identities=40% Similarity=0.429 Sum_probs=32.3
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
+.++|+|||.|.+|+++|+.|+++|++|++.|+++
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 35789999999999999999999999999999864
No 373
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=94.57 E-value=0.017 Score=56.59 Aligned_cols=33 Identities=15% Similarity=0.241 Sum_probs=31.4
Q ss_pred CeEEEEcCCCCHHHHHHHHhhhcCeEEEecccC
Q 044575 206 EVVVVVGNSLSGQDISMELVEVAKEVHLSAKSL 238 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~ 238 (454)
++|+|||||++|+-+|..|++.|.+|+++++.+
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 689999999999999999999999999999876
No 374
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=94.57 E-value=0.021 Score=56.13 Aligned_cols=34 Identities=29% Similarity=0.427 Sum_probs=31.6
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
.++|+|||.|.+|+++|+.|+++|++|+++|.+.
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~ 38 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRM 38 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSS
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCC
Confidence 4689999999999999999999999999999865
No 375
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=94.46 E-value=0.03 Score=49.20 Aligned_cols=32 Identities=22% Similarity=0.400 Sum_probs=30.4
Q ss_pred cEEEECcChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 14 NVCVIGAGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 14 ~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
+|+|||+|.-|...|..|.+.|++|+++|+++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 69999999999999999999999999999865
No 376
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=94.44 E-value=0.032 Score=53.23 Aligned_cols=35 Identities=20% Similarity=0.348 Sum_probs=32.2
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
...+|+|||+|..|+.+|+.|+..|.+|+++|+++
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 35789999999999999999999999999999875
No 377
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=94.39 E-value=0.034 Score=51.28 Aligned_cols=44 Identities=32% Similarity=0.352 Sum_probs=31.3
Q ss_pred CCCCchhhccCCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 1 MVSDDHQQCAQSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 1 m~~~~~~~~~~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
|-++.+.....+++|.|||+|.-|-..|..|+ .|++|+++|+++
T Consensus 1 ~~~~~~~~~~~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 1 MGSDKIHHHHHHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp -----------CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCccccccccCCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 44445544556789999999999999999999 999999999865
No 378
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=94.19 E-value=0.042 Score=51.78 Aligned_cols=33 Identities=24% Similarity=0.228 Sum_probs=30.8
Q ss_pred CcEEEECcChHHHHHHHHHHHcCC-cEEEEeeCC
Q 044575 13 KNVCVIGAGPSGLVAARELRKEGH-RVVVLEQNH 45 (454)
Q Consensus 13 ~~VvIIGaG~aGl~aA~~l~~~g~-~v~vie~~~ 45 (454)
.+|+|||||.-|.+.|..|++.|+ +|+++|.+.
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 589999999999999999999998 999999865
No 379
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=94.16 E-value=0.043 Score=52.26 Aligned_cols=34 Identities=29% Similarity=0.531 Sum_probs=31.4
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCC-cEEEEeeC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGH-RVVVLEQN 44 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~-~v~vie~~ 44 (454)
...+|||+|||.+|+.+|+.|...|. +|+++|++
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~ 221 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKF 221 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECC
Confidence 35689999999999999999999999 99999986
No 380
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=94.12 E-value=0.033 Score=55.64 Aligned_cols=36 Identities=22% Similarity=0.294 Sum_probs=33.1
Q ss_pred CCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCc
Q 044575 205 NEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNI 240 (454)
Q Consensus 205 ~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~ 240 (454)
.++|+|||+|.+|+.+|..|++.|.+|+++++++++
T Consensus 33 ~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~ 68 (498)
T 2iid_A 33 PKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERP 68 (498)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCC
Confidence 478999999999999999999999999999987654
No 381
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=94.12 E-value=0.046 Score=51.17 Aligned_cols=34 Identities=26% Similarity=0.394 Sum_probs=31.1
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCC-cEEEEeeCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGH-RVVVLEQNH 45 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~-~v~vie~~~ 45 (454)
..+|+|||+|.-|.+.|..|++.|+ +|+++|+++
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 3689999999999999999999998 999999864
No 382
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=94.09 E-value=0.035 Score=54.13 Aligned_cols=35 Identities=31% Similarity=0.259 Sum_probs=32.3
Q ss_pred CeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCc
Q 044575 206 EVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNI 240 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~ 240 (454)
++|+|||+|.+|+-+|..|++.|.+|+++++++.+
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~ 35 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMI 35 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 37999999999999999999999999999997765
No 383
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=94.06 E-value=0.035 Score=53.35 Aligned_cols=35 Identities=14% Similarity=0.207 Sum_probs=32.0
Q ss_pred CeEEEEcCCCCHHHHHHHHhhh--cCeEEEecccCCc
Q 044575 206 EVVVVVGNSLSGQDISMELVEV--AKEVHLSAKSLNI 240 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~~--~~~V~l~~r~~~~ 240 (454)
++|+|||||++|+-+|..|++. |.+|+++++.+..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 3699999999999999999999 9999999997654
No 384
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=94.05 E-value=0.044 Score=52.10 Aligned_cols=33 Identities=27% Similarity=0.398 Sum_probs=30.7
Q ss_pred CcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 13 KNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 13 ~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
.+|+|||+|.-|...|..|++.|++|+++++++
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 579999999999999999999999999999864
No 385
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=93.98 E-value=0.048 Score=51.83 Aligned_cols=34 Identities=26% Similarity=0.388 Sum_probs=31.5
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCC-cEEEEeeC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGH-RVVVLEQN 44 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~-~v~vie~~ 44 (454)
+..+|+|+|||.+|+.+|+.|...|. +|+++|++
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 45789999999999999999999998 89999986
No 386
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=93.93 E-value=0.057 Score=52.08 Aligned_cols=37 Identities=24% Similarity=0.440 Sum_probs=33.1
Q ss_pred ccCCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 9 CAQSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 9 ~~~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
+...++|+|||+|..|..+++.+++.|++|+++|..+
T Consensus 11 ~~~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~ 47 (389)
T 3q2o_A 11 ILPGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTK 47 (389)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESST
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCC
Confidence 3456799999999999999999999999999999754
No 387
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=93.81 E-value=0.039 Score=50.24 Aligned_cols=36 Identities=14% Similarity=0.321 Sum_probs=32.9
Q ss_pred CCCCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccC
Q 044575 203 FRNEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSL 238 (454)
Q Consensus 203 ~~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~ 238 (454)
.++++|+|||+|.+|...+..|.+.|.+|+++....
T Consensus 11 l~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 11 LKDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp CTTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred cCCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 467999999999999999999999999999998654
No 388
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=93.80 E-value=0.064 Score=50.26 Aligned_cols=34 Identities=21% Similarity=0.339 Sum_probs=30.8
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCC-cEEEEeeCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGH-RVVVLEQNH 45 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~-~v~vie~~~ 45 (454)
..+|+|||||..|...|..|+..|+ +|+++|.+.
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 3589999999999999999999998 999999764
No 389
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=93.72 E-value=0.037 Score=53.00 Aligned_cols=33 Identities=30% Similarity=0.382 Sum_probs=30.8
Q ss_pred CeEEEEcCCCCHHHHHHHHhhhcCeEEEecccC
Q 044575 206 EVVVVVGNSLSGQDISMELVEVAKEVHLSAKSL 238 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~ 238 (454)
++|+|||+|..|++.|..+++.|.+|+++++++
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~ 34 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRP 34 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 469999999999999999999999999999866
No 390
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=93.71 E-value=0.042 Score=53.47 Aligned_cols=35 Identities=23% Similarity=0.230 Sum_probs=32.2
Q ss_pred CeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCc
Q 044575 206 EVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNI 240 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~ 240 (454)
++|+|||+|.+|+-+|..|++.|.+|+++++++.+
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~ 35 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPIT 35 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCC
Confidence 37999999999999999999999999999998664
No 391
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=93.65 E-value=0.057 Score=52.26 Aligned_cols=34 Identities=32% Similarity=0.414 Sum_probs=31.6
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
..+|+|||+|..|+.+|..++..|.+|+++|++.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 5789999999999999999999999999999864
No 392
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=93.59 E-value=0.062 Score=53.10 Aligned_cols=38 Identities=24% Similarity=0.329 Sum_probs=34.0
Q ss_pred ccCCCcEEEECcChHHHHHHHHHHHc-CC-cEEEEeeCCC
Q 044575 9 CAQSKNVCVIGAGPSGLVAARELRKE-GH-RVVVLEQNHD 46 (454)
Q Consensus 9 ~~~~~~VvIIGaG~aGl~aA~~l~~~-g~-~v~vie~~~~ 46 (454)
+.+.++|+|||+|.-|+..|..|++. |+ +|+++|+++.
T Consensus 15 ~~~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 15 RGPIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp HCSCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred cCCCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 34457899999999999999999999 99 9999998764
No 393
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=93.55 E-value=0.07 Score=50.88 Aligned_cols=34 Identities=32% Similarity=0.628 Sum_probs=31.6
Q ss_pred CcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCC
Q 044575 13 KNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHD 46 (454)
Q Consensus 13 ~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~ 46 (454)
++|+|||||..|..+++.+++.|++++++|.++.
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 6899999999999999999999999999997654
No 394
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=93.48 E-value=0.073 Score=49.36 Aligned_cols=34 Identities=38% Similarity=0.528 Sum_probs=31.4
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
.++|.|||+|.-|...|..|++.|++|+++|+++
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3679999999999999999999999999999864
No 395
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=93.48 E-value=0.041 Score=52.71 Aligned_cols=33 Identities=24% Similarity=0.298 Sum_probs=30.9
Q ss_pred CeEEEEcCCCCHHHHHHHHhhhcCeEEEecccC
Q 044575 206 EVVVVVGNSLSGQDISMELVEVAKEVHLSAKSL 238 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~ 238 (454)
.+|+|||+|.+|+-+|..|++.|.+|+++++..
T Consensus 18 ~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~ 50 (382)
T 1ryi_A 18 YEAVVIGGGIIGSAIAYYLAKENKNTALFESGT 50 (382)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 579999999999999999999999999999864
No 396
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=93.44 E-value=0.071 Score=51.33 Aligned_cols=35 Identities=26% Similarity=0.370 Sum_probs=32.0
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
...+|+|||+|..|+.++..++..|.+|+++|+++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 35789999999999999999999999999999865
No 397
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=93.37 E-value=0.081 Score=46.13 Aligned_cols=35 Identities=17% Similarity=0.387 Sum_probs=31.5
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHD 46 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~ 46 (454)
.++|.|||+|.-|.+.|..|++.|++|+++++++.
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 46899999999999999999999999999998653
No 398
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=93.28 E-value=0.049 Score=53.18 Aligned_cols=33 Identities=27% Similarity=0.361 Sum_probs=30.6
Q ss_pred eEEEEcCCCCHHHHHHHHhhhcCeEEEecccCC
Q 044575 207 VVVVVGNSLSGQDISMELVEVAKEVHLSAKSLN 239 (454)
Q Consensus 207 ~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~ 239 (454)
+|+|||+|.+|+-.|..|++.|.+|++++++++
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~ 35 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNAGKKVLLLEGGER 35 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CEEEECCcHHHHHHHHHHHHcCCeEEEEecCCC
Confidence 699999999999999999999999999998654
No 399
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=93.27 E-value=0.076 Score=49.50 Aligned_cols=34 Identities=24% Similarity=0.345 Sum_probs=31.0
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
..+|+|||||.-|-..|..++..|++|+++|.++
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3689999999999999999999999999999864
No 400
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=93.27 E-value=0.033 Score=45.35 Aligned_cols=34 Identities=18% Similarity=0.178 Sum_probs=31.1
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
.++|+|||+|..|...|..|.+.|.+|++++++.
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 5789999999999999999999999999999864
No 401
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=93.27 E-value=0.048 Score=52.58 Aligned_cols=33 Identities=24% Similarity=0.258 Sum_probs=30.5
Q ss_pred CeEEEEcCCCCHHHHHHHHhhhcCeEEEecccC
Q 044575 206 EVVVVVGNSLSGQDISMELVEVAKEVHLSAKSL 238 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~ 238 (454)
-.|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 5 ~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~ 37 (397)
T 2oln_A 5 YDVVVVGGGPVGLATAWQVAERGHRVLVLERHT 37 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 379999999999999999999999999999864
No 402
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=93.26 E-value=0.074 Score=50.96 Aligned_cols=37 Identities=14% Similarity=0.257 Sum_probs=33.8
Q ss_pred CCCeEEEEcCCCCHHHHHHHHhhhcCeEEEeccc-CCc
Q 044575 204 RNEVVVVVGNSLSGQDISMELVEVAKEVHLSAKS-LNI 240 (454)
Q Consensus 204 ~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~-~~~ 240 (454)
...+|+|||+|.+|+-+|..|.+.|.+|++++++ +++
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~v 80 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRV 80 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEecccccc
Confidence 4579999999999999999999999999999998 655
No 403
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=93.26 E-value=0.079 Score=49.34 Aligned_cols=35 Identities=26% Similarity=0.363 Sum_probs=32.2
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
..++|.|||+|.-|...|..|++.|++|+++++++
T Consensus 20 ~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 20 HMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred cCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 34789999999999999999999999999999865
No 404
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=93.25 E-value=0.076 Score=51.79 Aligned_cols=34 Identities=35% Similarity=0.461 Sum_probs=31.6
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
..+|+|||.|.-||..|..+++.|++|+.||-++
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 4689999999999999999999999999999754
No 405
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=93.21 E-value=0.084 Score=49.57 Aligned_cols=34 Identities=21% Similarity=0.253 Sum_probs=30.5
Q ss_pred CCcEEEECcChHHHH-HHHHHHHcCCcEEEEeeCC
Q 044575 12 SKNVCVIGAGPSGLV-AARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~-aA~~l~~~g~~v~vie~~~ 45 (454)
.++|.|||.|.+|++ +|+.|+++|++|++.|+++
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 368999999999996 7888899999999999865
No 406
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=93.19 E-value=0.054 Score=53.64 Aligned_cols=35 Identities=31% Similarity=0.385 Sum_probs=32.5
Q ss_pred CeEEEEcCCCCHHHHHHHHhhhcC--eEEEecccCCc
Q 044575 206 EVVVVVGNSLSGQDISMELVEVAK--EVHLSAKSLNI 240 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~~~~--~V~l~~r~~~~ 240 (454)
++|+|||||.+|+-.|..|++.|. +|+++++++++
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~ 39 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERL 39 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSS
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCC
Confidence 589999999999999999999999 99999987765
No 407
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=93.18 E-value=0.056 Score=52.62 Aligned_cols=36 Identities=11% Similarity=0.304 Sum_probs=33.1
Q ss_pred CCeEEEEcCCCCHHHHHHHHhhhc-CeEEEecccCCc
Q 044575 205 NEVVVVVGNSLSGQDISMELVEVA-KEVHLSAKSLNI 240 (454)
Q Consensus 205 ~k~vvVVG~G~sg~e~A~~l~~~~-~~V~l~~r~~~~ 240 (454)
..+|+|||+|.+|+-.|..|++.| .+|+++++++++
T Consensus 6 ~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~ 42 (424)
T 2b9w_A 6 DSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHV 42 (424)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCS
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCC
Confidence 368999999999999999999999 899999998766
No 408
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=93.08 E-value=0.086 Score=49.36 Aligned_cols=33 Identities=36% Similarity=0.506 Sum_probs=30.7
Q ss_pred CcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 13 KNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 13 ~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
++|+|||+|.-|.+.|..|.+.|.+|+++++++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 479999999999999999999999999999864
No 409
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=93.08 E-value=0.091 Score=48.17 Aligned_cols=32 Identities=28% Similarity=0.379 Sum_probs=30.2
Q ss_pred cEEEECcChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 14 NVCVIGAGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 14 ~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
+|.|||+|.-|...|..|.+.|++|+++++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCc
Confidence 69999999999999999999999999999865
No 410
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=93.07 E-value=0.043 Score=52.36 Aligned_cols=33 Identities=9% Similarity=0.198 Sum_probs=30.6
Q ss_pred CeEEEEcCCCCHHHHHHHHhhhcCeEEEecccC
Q 044575 206 EVVVVVGNSLSGQDISMELVEVAKEVHLSAKSL 238 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~ 238 (454)
.+|+|||+|.+|+-+|..|++.|.+|+++++..
T Consensus 3 ~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~ 35 (372)
T 2uzz_A 3 YDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHM 35 (372)
T ss_dssp EEEEESCTTHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEecCC
Confidence 369999999999999999999999999999864
No 411
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=93.06 E-value=0.091 Score=50.12 Aligned_cols=34 Identities=26% Similarity=0.384 Sum_probs=31.5
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
..+|+|+|+|..|..++..|+..|.+|+++++++
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3789999999999999999999999999999864
No 412
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=93.05 E-value=0.091 Score=49.02 Aligned_cols=34 Identities=29% Similarity=0.409 Sum_probs=31.3
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
..+|.|||+|.-|...|..|.+.|++|+++++++
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4689999999999999999999999999999864
No 413
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=93.04 E-value=0.056 Score=51.85 Aligned_cols=33 Identities=21% Similarity=0.139 Sum_probs=30.5
Q ss_pred CeEEEEcCCCCHHHHHHHHhhhcCeEEEecccC
Q 044575 206 EVVVVVGNSLSGQDISMELVEVAKEVHLSAKSL 238 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~ 238 (454)
.+|+|||+|.+|+-+|..|++.|.+|+++++..
T Consensus 4 ~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~ 36 (389)
T 2gf3_A 4 FDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFD 36 (389)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 479999999999999999999999999999864
No 414
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=92.99 E-value=0.048 Score=53.75 Aligned_cols=35 Identities=20% Similarity=0.345 Sum_probs=32.1
Q ss_pred CeEEEEcCCCCHHHHHHHHhhhc------CeEEEecccCCc
Q 044575 206 EVVVVVGNSLSGQDISMELVEVA------KEVHLSAKSLNI 240 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~~~------~~V~l~~r~~~~ 240 (454)
++|+|||||.+|+-+|..|++.| .+|+++++++++
T Consensus 6 ~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~ 46 (470)
T 3i6d_A 6 KHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRV 46 (470)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCC
Confidence 58999999999999999999999 899999987654
No 415
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=92.94 E-value=0.084 Score=52.37 Aligned_cols=34 Identities=38% Similarity=0.626 Sum_probs=31.7
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
..+|+|||+|.-|+..|..|++.|++|+++|+++
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4689999999999999999999999999999864
No 416
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=92.93 E-value=0.075 Score=52.86 Aligned_cols=36 Identities=22% Similarity=0.250 Sum_probs=33.4
Q ss_pred CCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCc
Q 044575 205 NEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNI 240 (454)
Q Consensus 205 ~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~ 240 (454)
..+|+|||+|.+|+-+|..|++.|.+|+++++.+++
T Consensus 11 ~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~ 46 (489)
T 2jae_A 11 SHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRP 46 (489)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCC
Confidence 468999999999999999999999999999998775
No 417
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=92.92 E-value=0.1 Score=49.25 Aligned_cols=32 Identities=28% Similarity=0.565 Sum_probs=30.2
Q ss_pred CcEEEECcChHHHHHHHHHHHcCCcEEEEeeC
Q 044575 13 KNVCVIGAGPSGLVAARELRKEGHRVVVLEQN 44 (454)
Q Consensus 13 ~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~ 44 (454)
++|+|||+|.-|.+.|..|++.|++|++++++
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 57999999999999999999999999999984
No 418
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=92.89 E-value=0.092 Score=49.97 Aligned_cols=37 Identities=41% Similarity=0.529 Sum_probs=32.0
Q ss_pred ccCCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 9 CAQSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 9 ~~~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
|++.++|.|||.|.-|...|..|++.|++|+++++++
T Consensus 19 Mm~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 19 YFQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred hhcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4556789999999999999999999999999999865
No 419
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=92.71 E-value=0.1 Score=48.81 Aligned_cols=34 Identities=24% Similarity=0.345 Sum_probs=31.3
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
.++|.|||+|.-|...|..|++.|++|+++|+++
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3689999999999999999999999999999865
No 420
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=92.68 E-value=0.11 Score=48.39 Aligned_cols=34 Identities=35% Similarity=0.445 Sum_probs=31.4
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCC-cEEEEeeC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGH-RVVVLEQN 44 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~-~v~vie~~ 44 (454)
+..+|+|||+|.-|.+.|..|+..|+ +|+++|..
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 35689999999999999999999999 99999986
No 421
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=92.68 E-value=0.073 Score=50.63 Aligned_cols=32 Identities=28% Similarity=0.429 Sum_probs=30.1
Q ss_pred CeEEEEcCCCCHHHHHHHHhhhcCeEEEeccc
Q 044575 206 EVVVVVGNSLSGQDISMELVEVAKEVHLSAKS 237 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~ 237 (454)
.+|+|||+|.+|+-+|..|++.|.+|+++++.
T Consensus 7 ~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~ 38 (363)
T 1c0p_A 7 KRVVVLGSGVIGLSSALILARKGYSVHILARD 38 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCEEEEEecc
Confidence 57999999999999999999999999999975
No 422
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=92.67 E-value=0.13 Score=47.02 Aligned_cols=33 Identities=33% Similarity=0.555 Sum_probs=31.0
Q ss_pred CcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 13 KNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 13 ~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
++|+|.|+|+-|...+..|.+.|++|+++.++.
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGHEVTGLRRSA 36 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEECTT
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 579999999999999999999999999999864
No 423
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=92.61 E-value=0.094 Score=48.87 Aligned_cols=33 Identities=27% Similarity=0.468 Sum_probs=30.2
Q ss_pred CcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 13 KNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 13 ~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
++|+|||+|.-|.+.|..|.+.|.+|+++++++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 479999999999999999999999999999853
No 424
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=92.61 E-value=0.11 Score=49.52 Aligned_cols=34 Identities=24% Similarity=0.432 Sum_probs=31.6
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
.++|+|||+|.-|.+.|..|++.|++|+++++++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4689999999999999999999999999999864
No 425
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=92.59 E-value=0.13 Score=46.70 Aligned_cols=34 Identities=38% Similarity=0.549 Sum_probs=31.6
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
.++++|||+|-+|-++|..|.+.|.+|+|+.|+.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 5789999999999999999999999999999865
No 426
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=92.58 E-value=0.081 Score=46.45 Aligned_cols=33 Identities=27% Similarity=0.400 Sum_probs=30.6
Q ss_pred CcEEEECc-ChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 13 KNVCVIGA-GPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 13 ~~VvIIGa-G~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
++|+|.|| |.-|...+..|.+.|++|+++.|++
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCG
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCc
Confidence 68999996 9999999999999999999999864
No 427
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=92.56 E-value=0.11 Score=48.53 Aligned_cols=33 Identities=27% Similarity=0.400 Sum_probs=30.6
Q ss_pred CcEEEECcChHHHHHHHHHHHcCC--cEEEEeeCC
Q 044575 13 KNVCVIGAGPSGLVAARELRKEGH--RVVVLEQNH 45 (454)
Q Consensus 13 ~~VvIIGaG~aGl~aA~~l~~~g~--~v~vie~~~ 45 (454)
.+|+|||+|.-|...|..|++.|+ +|+++|++.
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 589999999999999999999998 999999864
No 428
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=92.53 E-value=0.11 Score=46.78 Aligned_cols=34 Identities=24% Similarity=0.421 Sum_probs=31.0
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCC-cEEEEeeCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGH-RVVVLEQNH 45 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~-~v~vie~~~ 45 (454)
..+|+|||+|-.|..+|+.|++.|. +++|+|+..
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 4789999999999999999999997 899999853
No 429
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=92.51 E-value=0.1 Score=47.59 Aligned_cols=33 Identities=24% Similarity=0.383 Sum_probs=30.9
Q ss_pred CcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 13 KNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 13 ~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
++|+|+|||+-|-..+..|.+.|++|+++.|++
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 579999999999999999999999999999864
No 430
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=92.48 E-value=0.11 Score=48.26 Aligned_cols=33 Identities=24% Similarity=0.392 Sum_probs=30.6
Q ss_pred CcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 13 KNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 13 ~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
++|+|||+|.-|...|..|.+.|++|+++++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 379999999999999999999999999999864
No 431
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=92.45 E-value=0.1 Score=51.25 Aligned_cols=33 Identities=27% Similarity=0.490 Sum_probs=31.0
Q ss_pred CcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 13 KNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 13 ~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
++|+|||+|.-|+..|..|++.|++|+++|+++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 479999999999999999999999999999865
No 432
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=92.40 E-value=0.087 Score=50.71 Aligned_cols=36 Identities=28% Similarity=0.478 Sum_probs=32.9
Q ss_pred CeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCcC
Q 044575 206 EVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNIS 241 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~~ 241 (454)
.+|+|||+|.+|+-+|..|++.|.+|+++++++.+.
T Consensus 4 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~G 39 (384)
T 2bi7_A 4 KKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIG 39 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcC
Confidence 479999999999999999999999999999987653
No 433
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=92.37 E-value=0.11 Score=48.68 Aligned_cols=76 Identities=11% Similarity=0.022 Sum_probs=51.7
Q ss_pred CCeEEEEcCCCCHHH-HHHHHhhhcCeEEEecccCCcCccchhhhccCC-CeEEcCceeEEecCCcEEEeCCCEE---ee
Q 044575 205 NEVVVVVGNSLSGQD-ISMELVEVAKEVHLSAKSLNISEGLSKVISKHN-NLHLHPQIDCLREDGRVTFVDGCWV---TA 279 (454)
Q Consensus 205 ~k~vvVVG~G~sg~e-~A~~l~~~~~~V~l~~r~~~~~~~~~~~l~~~~-~i~~~~~v~~v~~~~~v~~~dG~~i---~~ 279 (454)
.++|.|||.|.+|+. +|..|.+.|.+|+.++++... ...+.+.+.+ .+..+ . +.+.+ .+
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~~--~~~~~L~~~gi~v~~g--------~------~~~~l~~~~~ 67 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYP--PMSTQLEALGIDVYEG--------F------DAAQLDEFKA 67 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCCT--THHHHHHHTTCEEEES--------C------CGGGGGSCCC
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCCc--HHHHHHHhCCCEEECC--------C------CHHHcCCCCC
Confidence 479999999999997 888999999999999986531 1222332221 11111 0 01111 48
Q ss_pred ceEEEccCcccCCcCCC
Q 044575 280 DTILYCTGYSYSFPFLD 296 (454)
Q Consensus 280 D~vI~atG~~~~~~~l~ 296 (454)
|.||.+.|..++.|.+.
T Consensus 68 d~vV~Spgi~~~~p~~~ 84 (326)
T 3eag_A 68 DVYVIGNVAKRGMDVVE 84 (326)
T ss_dssp SEEEECTTCCTTCHHHH
T ss_pred CEEEECCCcCCCCHHHH
Confidence 99999999999888753
No 434
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=92.34 E-value=0.1 Score=42.79 Aligned_cols=34 Identities=15% Similarity=0.263 Sum_probs=31.2
Q ss_pred CCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccC
Q 044575 205 NEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSL 238 (454)
Q Consensus 205 ~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~ 238 (454)
.++++|+|+|..|..++..|.+.|.+|+++.+.+
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 4789999999999999999999999999999863
No 435
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=92.33 E-value=0.11 Score=47.98 Aligned_cols=33 Identities=30% Similarity=0.349 Sum_probs=30.6
Q ss_pred CcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 13 KNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 13 ~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
.+|.|||+|.-|...|..|.+.|++|+++++++
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 579999999999999999999999999999864
No 436
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=92.28 E-value=0.077 Score=53.26 Aligned_cols=35 Identities=11% Similarity=0.286 Sum_probs=32.4
Q ss_pred CeEEEEcCCCCHHHHHHHHhhhc-CeEEEecccCCc
Q 044575 206 EVVVVVGNSLSGQDISMELVEVA-KEVHLSAKSLNI 240 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~~~-~~V~l~~r~~~~ 240 (454)
.+|+|||+|.+|+-.|..|++.| .+|+++++++++
T Consensus 9 ~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~ri 44 (516)
T 1rsg_A 9 KKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRV 44 (516)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCC
Confidence 58999999999999999999999 999999987755
No 437
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=92.27 E-value=0.14 Score=49.96 Aligned_cols=35 Identities=23% Similarity=0.336 Sum_probs=31.7
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
..++|+|||+|..|...+..+++.|++|+++|..+
T Consensus 34 ~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~ 68 (419)
T 4e4t_A 34 PGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDP 68 (419)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 45789999999999999999999999999998654
No 438
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=92.27 E-value=0.13 Score=49.10 Aligned_cols=34 Identities=32% Similarity=0.522 Sum_probs=31.6
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
..+|+|+|+|..|..+|+.++..|.+|+++|+++
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4789999999999999999999999999999864
No 439
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=92.25 E-value=0.14 Score=45.82 Aligned_cols=34 Identities=26% Similarity=0.455 Sum_probs=31.7
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
.++|.|||+|.-|.+.|..|++.|++|+++++++
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 5789999999999999999999999999999864
No 440
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=92.24 E-value=0.14 Score=46.66 Aligned_cols=34 Identities=18% Similarity=0.155 Sum_probs=31.3
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
.++++|+|+|-.|.++|..|++.|.+|++++|+.
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 4789999999999999999999999999999864
No 441
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=92.23 E-value=0.085 Score=49.90 Aligned_cols=32 Identities=22% Similarity=0.344 Sum_probs=29.8
Q ss_pred eEEEEcCCCCHHHHHHHHhhhc------CeEEEecccC
Q 044575 207 VVVVVGNSLSGQDISMELVEVA------KEVHLSAKSL 238 (454)
Q Consensus 207 ~vvVVG~G~sg~e~A~~l~~~~------~~V~l~~r~~ 238 (454)
+|+|||+|.+|+-+|..|++.| .+|+++++..
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 6999999999999999999998 8999999864
No 442
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=92.22 E-value=0.1 Score=51.58 Aligned_cols=33 Identities=33% Similarity=0.506 Sum_probs=30.5
Q ss_pred CcEEEECcChHHHHHHHHHHHc--CCcEEEEeeCC
Q 044575 13 KNVCVIGAGPSGLVAARELRKE--GHRVVVLEQNH 45 (454)
Q Consensus 13 ~~VvIIGaG~aGl~aA~~l~~~--g~~v~vie~~~ 45 (454)
++|+|||+|.-|+..|..|++. |++|+++|+++
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 5899999999999999999999 79999999864
No 443
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=92.15 E-value=0.08 Score=52.21 Aligned_cols=35 Identities=23% Similarity=0.098 Sum_probs=33.0
Q ss_pred CeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCc
Q 044575 206 EVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNI 240 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~ 240 (454)
.+|+|||+|.+|+-+|..|++.|.+|+++++++.+
T Consensus 12 ~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~ 46 (453)
T 2bcg_G 12 YDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHY 46 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 46999999999999999999999999999998876
No 444
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=92.14 E-value=0.12 Score=51.08 Aligned_cols=35 Identities=23% Similarity=0.360 Sum_probs=32.1
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
+.++|+|||+|..|...++.|.+.|.+|+|++++.
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~ 45 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLEAGARLTVNALTF 45 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCC
Confidence 35789999999999999999999999999999753
No 445
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=92.14 E-value=0.14 Score=49.08 Aligned_cols=35 Identities=43% Similarity=0.548 Sum_probs=32.0
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
...+|+|||+|..|..+|+.++..|.+|+++|++.
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 35789999999999999999999999999999864
No 446
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=92.11 E-value=0.079 Score=52.49 Aligned_cols=36 Identities=25% Similarity=0.322 Sum_probs=32.7
Q ss_pred CCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCc
Q 044575 205 NEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNI 240 (454)
Q Consensus 205 ~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~ 240 (454)
..+|+|||+|.+|+-+|..|++.|.+|+++++++.+
T Consensus 16 ~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~ 51 (478)
T 2ivd_A 16 GMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARL 51 (478)
T ss_dssp -CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCC
Confidence 368999999999999999999999999999998765
No 447
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=92.10 E-value=0.17 Score=48.60 Aligned_cols=36 Identities=33% Similarity=0.541 Sum_probs=32.5
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHD 46 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~ 46 (454)
..++|+|||+|.-|...++.+++.|++|+++|..+.
T Consensus 11 ~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~ 46 (377)
T 3orq_A 11 FGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSED 46 (377)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 457899999999999999999999999999997653
No 448
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=92.06 E-value=0.098 Score=50.50 Aligned_cols=36 Identities=17% Similarity=0.288 Sum_probs=33.0
Q ss_pred CeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCcC
Q 044575 206 EVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNIS 241 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~~ 241 (454)
.+|+|||+|.+|+-+|..|++.|.+|+++++++.+.
T Consensus 30 ~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~G 65 (397)
T 3hdq_A 30 FDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIG 65 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSS
T ss_pred CCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCC
Confidence 589999999999999999999999999999987653
No 449
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=92.05 E-value=0.13 Score=47.56 Aligned_cols=33 Identities=24% Similarity=0.398 Sum_probs=30.6
Q ss_pred CcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 13 KNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 13 ~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
++|+|||+|.-|.+.|..|.+.|.+|++++|+.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 479999999999999999999999999999864
No 450
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=92.04 E-value=0.16 Score=44.39 Aligned_cols=34 Identities=29% Similarity=0.380 Sum_probs=30.7
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
..+|+|||+|.-|...|..|.+.|++|++++++.
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999999864
No 451
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=92.03 E-value=0.08 Score=53.17 Aligned_cols=35 Identities=26% Similarity=0.234 Sum_probs=31.9
Q ss_pred CeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCc
Q 044575 206 EVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNI 240 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~ 240 (454)
.+|+|||+|.+|+-.|..|++.|.+|+++++++++
T Consensus 5 ~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~ 39 (520)
T 1s3e_A 5 CDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRV 39 (520)
T ss_dssp CSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 57999999999999999999999999999987654
No 452
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=92.01 E-value=0.094 Score=40.52 Aligned_cols=36 Identities=25% Similarity=0.220 Sum_probs=31.8
Q ss_pred CCCeEEEEcCCCCHHHHHHHHhhhc-CeEEEecccCC
Q 044575 204 RNEVVVVVGNSLSGQDISMELVEVA-KEVHLSAKSLN 239 (454)
Q Consensus 204 ~~k~vvVVG~G~sg~e~A~~l~~~~-~~V~l~~r~~~ 239 (454)
.+++|+|+|+|.+|..++..|...| .+|+++.|++.
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~ 40 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLA 40 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHH
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHH
Confidence 3578999999999999999999999 88999988653
No 453
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=91.99 E-value=0.14 Score=47.09 Aligned_cols=33 Identities=27% Similarity=0.412 Sum_probs=30.9
Q ss_pred CcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 13 KNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 13 ~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
++|.|||+|.-|...|..|++.|++|+++++++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSP 34 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 479999999999999999999999999999865
No 454
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=91.99 E-value=0.15 Score=49.47 Aligned_cols=35 Identities=31% Similarity=0.512 Sum_probs=31.9
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHD 46 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~ 46 (454)
..+|+|||.|.-|...|+.|.+.|++|++||+++.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~ 38 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD 38 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 35799999999999999999999999999998654
No 455
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=91.95 E-value=0.14 Score=47.49 Aligned_cols=32 Identities=31% Similarity=0.485 Sum_probs=29.8
Q ss_pred cEEEECcChHHHHHHHHHHHcCC--cEEEEeeCC
Q 044575 14 NVCVIGAGPSGLVAARELRKEGH--RVVVLEQNH 45 (454)
Q Consensus 14 ~VvIIGaG~aGl~aA~~l~~~g~--~v~vie~~~ 45 (454)
+|+|||||..|.+.|..|+..|+ +|+++|.+.
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 69999999999999999999998 999999864
No 456
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=91.95 E-value=0.083 Score=46.49 Aligned_cols=34 Identities=18% Similarity=0.276 Sum_probs=30.6
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEE-EeeCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVV-LEQNH 45 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~v-ie~~~ 45 (454)
..+|.|||+|.-|.+.|..|.+.|++|++ +++++
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 36899999999999999999999999998 77754
No 457
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=91.81 E-value=0.16 Score=47.57 Aligned_cols=34 Identities=35% Similarity=0.467 Sum_probs=30.5
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCC--cEEEEeeCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGH--RVVVLEQNH 45 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~--~v~vie~~~ 45 (454)
..+|+|||+|..|.+.|..|+..|. +++++|...
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~ 40 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVNK 40 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecch
Confidence 3689999999999999999999987 899999854
No 458
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=91.81 E-value=0.12 Score=51.63 Aligned_cols=36 Identities=19% Similarity=0.187 Sum_probs=33.3
Q ss_pred CCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCc
Q 044575 205 NEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNI 240 (454)
Q Consensus 205 ~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~ 240 (454)
..+|+|||+|.+|+-+|..|++.|.+|+++++++.+
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ 48 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKA 48 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCC
Confidence 368999999999999999999999999999998765
No 459
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=91.79 E-value=0.16 Score=44.87 Aligned_cols=35 Identities=34% Similarity=0.502 Sum_probs=31.6
Q ss_pred CCCcEEEECc-ChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 11 QSKNVCVIGA-GPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 11 ~~~~VvIIGa-G~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
+.++|+|.|| |.-|...++.|++.|++|+++.|+.
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 3578999998 9999999999999999999999864
No 460
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=91.78 E-value=0.15 Score=47.93 Aligned_cols=34 Identities=29% Similarity=0.488 Sum_probs=31.5
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
..+|.|||+|.-|.+.|..|.+.|++|+++++++
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~ 47 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWARRK 47 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 4789999999999999999999999999999864
No 461
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=91.75 E-value=0.1 Score=50.63 Aligned_cols=33 Identities=18% Similarity=0.237 Sum_probs=30.4
Q ss_pred CeEEEEcCCCCHHHHHHHHhhh--cCeEEEecccC
Q 044575 206 EVVVVVGNSLSGQDISMELVEV--AKEVHLSAKSL 238 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~~--~~~V~l~~r~~ 238 (454)
..|+|||+|.+|+-+|..|++. |.+|+++++..
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~ 71 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGG 71 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSC
T ss_pred CCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 4799999999999999999999 99999999753
No 462
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=91.73 E-value=0.18 Score=47.29 Aligned_cols=33 Identities=27% Similarity=0.374 Sum_probs=30.7
Q ss_pred CcEEEECcChHHHHHHHHHHHcCC-cEEEEeeCC
Q 044575 13 KNVCVIGAGPSGLVAARELRKEGH-RVVVLEQNH 45 (454)
Q Consensus 13 ~~VvIIGaG~aGl~aA~~l~~~g~-~v~vie~~~ 45 (454)
.+|+|||||.-|.+.|..|+..|+ +|+++|.+.
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 589999999999999999999998 999999865
No 463
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=91.71 E-value=0.16 Score=47.05 Aligned_cols=33 Identities=27% Similarity=0.330 Sum_probs=31.1
Q ss_pred CcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 13 KNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 13 ~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
++|.|||+|.-|...|..|++.|++|+++++++
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 589999999999999999999999999999865
No 464
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=91.70 E-value=0.18 Score=43.19 Aligned_cols=33 Identities=30% Similarity=0.558 Sum_probs=30.6
Q ss_pred CcEEEECc-ChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 13 KNVCVIGA-GPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 13 ~~VvIIGa-G~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
++|+|+|| |.-|...++.|.+.|++|+++.+++
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 57999999 9999999999999999999999864
No 465
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=91.67 E-value=0.11 Score=51.00 Aligned_cols=35 Identities=20% Similarity=0.210 Sum_probs=32.2
Q ss_pred CeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCc
Q 044575 206 EVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNI 240 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~ 240 (454)
.+|+|||+|.+|+-+|..|++.|.+|+++++++.+
T Consensus 6 ~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ 40 (453)
T 2yg5_A 6 RDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRV 40 (453)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCC
Confidence 57999999999999999999999999999987654
No 466
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=91.66 E-value=0.11 Score=52.45 Aligned_cols=33 Identities=21% Similarity=0.283 Sum_probs=30.6
Q ss_pred CeEEEEcCCCCHHHHHHHHhh---hcCeEEEecccC
Q 044575 206 EVVVVVGNSLSGQDISMELVE---VAKEVHLSAKSL 238 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~---~~~~V~l~~r~~ 238 (454)
.+|+|||||.+|+-+|..|++ .|.+|+++++..
T Consensus 6 ~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 41 (538)
T 2aqj_A 6 KNIVIVGGGTAGWMAASYLVRALQQQANITLIESAA 41 (538)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCC
Confidence 589999999999999999999 899999999854
No 467
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=91.65 E-value=0.17 Score=47.23 Aligned_cols=34 Identities=26% Similarity=0.359 Sum_probs=30.3
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCC--cEEEEeeCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGH--RVVVLEQNH 45 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~--~v~vie~~~ 45 (454)
..+|+|||+|..|.+.|..|+..+. +++++|.+.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 3689999999999999999999987 899999754
No 468
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=91.56 E-value=0.16 Score=46.88 Aligned_cols=34 Identities=24% Similarity=0.237 Sum_probs=31.1
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCC-cEEEEeeCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGH-RVVVLEQNH 45 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~-~v~vie~~~ 45 (454)
.++|+|||+|.+|.++|..|.+.|. +|++++|+.
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred CCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 4689999999999999999999998 999999864
No 469
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=91.50 E-value=0.18 Score=49.47 Aligned_cols=35 Identities=31% Similarity=0.544 Sum_probs=32.5
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNHD 46 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~~ 46 (454)
..+|.|||.|.-|+..|..|++.|++|+++|+++.
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 46899999999999999999999999999999764
No 470
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=91.49 E-value=0.1 Score=51.10 Aligned_cols=34 Identities=15% Similarity=0.193 Sum_probs=31.1
Q ss_pred CeEEEEcCCCCHHHHHHHHhhhcC-eEEEecccCC
Q 044575 206 EVVVVVGNSLSGQDISMELVEVAK-EVHLSAKSLN 239 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~~~~-~V~l~~r~~~ 239 (454)
.+|+|||+|.+|+-+|..|++.|. +|+++++.+.
T Consensus 7 ~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~~ 41 (438)
T 3dje_A 7 SSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYPV 41 (438)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSCS
T ss_pred CCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCCC
Confidence 479999999999999999999999 9999988654
No 471
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=91.48 E-value=0.2 Score=46.83 Aligned_cols=34 Identities=21% Similarity=0.271 Sum_probs=31.2
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCC-cEEEEeeCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGH-RVVVLEQNH 45 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~-~v~vie~~~ 45 (454)
..+|+|||+|..|.+.|..|+..|+ +++++|..+
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 4689999999999999999999988 999999865
No 472
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=91.46 E-value=0.13 Score=49.21 Aligned_cols=34 Identities=29% Similarity=0.351 Sum_probs=31.5
Q ss_pred eEEEEcCCCCHHHHHHHHhhhcCeEEEecccCCc
Q 044575 207 VVVVVGNSLSGQDISMELVEVAKEVHLSAKSLNI 240 (454)
Q Consensus 207 ~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~~ 240 (454)
+|+|||+|.+|+-+|..|++.|.+|+++++++.+
T Consensus 3 ~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~ 36 (367)
T 1i8t_A 3 DYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHI 36 (367)
T ss_dssp EEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSS
T ss_pred CEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCC
Confidence 6899999999999999999999999999987754
No 473
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=91.44 E-value=0.15 Score=46.89 Aligned_cols=33 Identities=27% Similarity=0.334 Sum_probs=30.7
Q ss_pred CcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 13 KNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 13 ~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
++|.|||.|.-|...|..|++.|++|+++++++
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNP 34 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 369999999999999999999999999999865
No 474
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=91.43 E-value=0.2 Score=46.41 Aligned_cols=34 Identities=35% Similarity=0.562 Sum_probs=31.7
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
.++|.|||.|.-|...|..|++.|++|+++++++
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999999999999865
No 475
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=91.42 E-value=0.14 Score=50.13 Aligned_cols=32 Identities=28% Similarity=0.489 Sum_probs=30.1
Q ss_pred cEEEECcChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 14 NVCVIGAGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 14 ~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
+|+|||+|.-|+..|..|++.|++|+++|+++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 69999999999999999999999999999864
No 476
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=91.41 E-value=0.12 Score=48.45 Aligned_cols=34 Identities=21% Similarity=0.253 Sum_probs=31.2
Q ss_pred eEEEEcCCCCHHHHHHHHhhh--cCeEEEecccCCc
Q 044575 207 VVVVVGNSLSGQDISMELVEV--AKEVHLSAKSLNI 240 (454)
Q Consensus 207 ~vvVVG~G~sg~e~A~~l~~~--~~~V~l~~r~~~~ 240 (454)
+|+|||+|++|+-+|..|++. +.+|+++++.+..
T Consensus 67 dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ 102 (326)
T 2gjc_A 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAP 102 (326)
T ss_dssp SEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSC
T ss_pred CEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccc
Confidence 799999999999999999998 9999999986554
No 477
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=91.41 E-value=0.19 Score=48.61 Aligned_cols=36 Identities=25% Similarity=0.339 Sum_probs=32.4
Q ss_pred ccCCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 9 CAQSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 9 ~~~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
|+..++|+|||+|..|...++.+++.|++|++++ .+
T Consensus 21 mm~~~~I~ilGgG~lg~~l~~aa~~lG~~v~~~d-~~ 56 (403)
T 3k5i_A 21 MWNSRKVGVLGGGQLGRMLVESANRLNIQVNVLD-AD 56 (403)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEE-ST
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEE-CC
Confidence 4456799999999999999999999999999999 54
No 478
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=91.39 E-value=0.16 Score=46.96 Aligned_cols=33 Identities=30% Similarity=0.399 Sum_probs=31.0
Q ss_pred CcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 13 KNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 13 ~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
++|.|||+|.-|...|..|.+.|++|+++++++
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 579999999999999999999999999999864
No 479
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=91.39 E-value=0.17 Score=47.23 Aligned_cols=34 Identities=26% Similarity=0.492 Sum_probs=31.5
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
.++|.|||+|.-|...|..|++.|++|+++++++
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 3589999999999999999999999999999865
No 480
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=91.35 E-value=0.14 Score=51.88 Aligned_cols=34 Identities=15% Similarity=0.158 Sum_probs=31.0
Q ss_pred CCeEEEEcCCCCHHHHHHHHhh---hcCeEEEecccC
Q 044575 205 NEVVVVVGNSLSGQDISMELVE---VAKEVHLSAKSL 238 (454)
Q Consensus 205 ~k~vvVVG~G~sg~e~A~~l~~---~~~~V~l~~r~~ 238 (454)
..+|+|||||.+|.-+|..|++ .|.+|+++++.+
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 61 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPD 61 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCC
Confidence 3689999999999999999999 889999999854
No 481
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=91.35 E-value=0.21 Score=46.83 Aligned_cols=34 Identities=35% Similarity=0.568 Sum_probs=30.8
Q ss_pred CCcEEEECc-ChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 12 SKNVCVIGA-GPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 12 ~~~VvIIGa-G~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
.++|+|.|| |.-|...++.|.+.|++|++++++.
T Consensus 13 ~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 47 (342)
T 2x4g_A 13 HVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPS 47 (342)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCh
Confidence 347999996 9999999999999999999999865
No 482
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=91.34 E-value=0.12 Score=48.30 Aligned_cols=37 Identities=19% Similarity=0.213 Sum_probs=31.8
Q ss_pred CCCeEEEEcCCCCHHHHHHHHhh--hcCeEEEecccCCc
Q 044575 204 RNEVVVVVGNSLSGQDISMELVE--VAKEVHLSAKSLNI 240 (454)
Q Consensus 204 ~~k~vvVVG~G~sg~e~A~~l~~--~~~~V~l~~r~~~~ 240 (454)
....|+|||+|+.|+-.|..|++ .|.+|+++++.+.+
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~ 102 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAP 102 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSC
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCC
Confidence 34579999999999999999975 58999999987654
No 483
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=91.34 E-value=0.21 Score=46.08 Aligned_cols=35 Identities=31% Similarity=0.492 Sum_probs=31.9
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
..++|.|||+|..|..+|+.|+..|.+|+++++..
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 35789999999999999999999999999999864
No 484
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=91.33 E-value=0.21 Score=46.24 Aligned_cols=35 Identities=29% Similarity=0.457 Sum_probs=32.0
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
..++|+|||+|..|..+|+.|+..|.+|++++++.
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 35789999999999999999999999999999864
No 485
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=91.33 E-value=0.15 Score=46.50 Aligned_cols=34 Identities=18% Similarity=0.295 Sum_probs=31.4
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
.++++|||+|-+|.++|..|.+.|.+|++++|+.
T Consensus 119 ~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 119 NQHVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp TCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 4689999999999999999999999999999864
No 486
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=91.32 E-value=0.078 Score=47.07 Aligned_cols=34 Identities=32% Similarity=0.417 Sum_probs=30.0
Q ss_pred CCCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 11 QSKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 11 ~~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
...+|+|+|+|.-|...|..|.+.|+ |+++|+++
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~ 41 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSEV-FVLAEDEN 41 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGG
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCe-EEEEECCH
Confidence 35689999999999999999999999 99999865
No 487
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=91.30 E-value=0.11 Score=50.18 Aligned_cols=36 Identities=22% Similarity=0.262 Sum_probs=32.8
Q ss_pred CeEEEEcCCCCHHHHHHHHhhh-cCeEEEecccCCcC
Q 044575 206 EVVVVVGNSLSGQDISMELVEV-AKEVHLSAKSLNIS 241 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~~-~~~V~l~~r~~~~~ 241 (454)
.+|+|||+|.+|+-+|..|++. |.+|+++++++.+.
T Consensus 8 ~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~G 44 (399)
T 1v0j_A 8 FDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIG 44 (399)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCC
Confidence 5799999999999999999999 99999999987653
No 488
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=91.29 E-value=0.19 Score=47.20 Aligned_cols=35 Identities=26% Similarity=0.381 Sum_probs=30.9
Q ss_pred CCcEEEECc-ChHHHHHHHHHHHcCCcEEEEeeCCC
Q 044575 12 SKNVCVIGA-GPSGLVAARELRKEGHRVVVLEQNHD 46 (454)
Q Consensus 12 ~~~VvIIGa-G~aGl~aA~~l~~~g~~v~vie~~~~ 46 (454)
.++|+|.|| |.-|...+..|++.|++|+++++...
T Consensus 19 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 54 (347)
T 4id9_A 19 SHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS 54 (347)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC
Confidence 578999999 99999999999999999999998753
No 489
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=91.28 E-value=0.13 Score=41.02 Aligned_cols=35 Identities=14% Similarity=0.245 Sum_probs=30.8
Q ss_pred CCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCC
Q 044575 205 NEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLN 239 (454)
Q Consensus 205 ~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~ 239 (454)
+.+|+|+|+|..|..+|..|.+.+.+|+++.+++.
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~ 38 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKD 38 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 35899999999999999999999999999988643
No 490
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=91.27 E-value=0.19 Score=49.23 Aligned_cols=34 Identities=24% Similarity=0.356 Sum_probs=31.8
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
.++|.|||+|.-|...|..|++.|++|+++|+++
T Consensus 54 i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 87 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNE 87 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcH
Confidence 4689999999999999999999999999999875
No 491
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=91.26 E-value=0.13 Score=50.75 Aligned_cols=35 Identities=14% Similarity=0.227 Sum_probs=32.1
Q ss_pred CeEEEEcCCCCHHHHHHHHhhhc--CeEEEecccCCc
Q 044575 206 EVVVVVGNSLSGQDISMELVEVA--KEVHLSAKSLNI 240 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~~~--~~V~l~~r~~~~ 240 (454)
.+|+|||+|.+|+-+|..|++.| .+|+++++++.+
T Consensus 5 ~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~ 41 (475)
T 3lov_A 5 KRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERL 41 (475)
T ss_dssp CEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSS
T ss_pred ccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCC
Confidence 58999999999999999999999 999999987654
No 492
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=91.26 E-value=0.2 Score=47.15 Aligned_cols=34 Identities=21% Similarity=0.204 Sum_probs=31.0
Q ss_pred CCcEEEECc-ChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 12 SKNVCVIGA-GPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 12 ~~~VvIIGa-G~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
.++|+|+|| |.-|...+..|.+.|++|+++.|++
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCC
Confidence 468999999 9999999999999999999999865
No 493
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=91.25 E-value=0.2 Score=46.40 Aligned_cols=35 Identities=29% Similarity=0.359 Sum_probs=31.8
Q ss_pred CCcEEEECc-ChHHHHHHHHHHHcCCcEEEEeeCCC
Q 044575 12 SKNVCVIGA-GPSGLVAARELRKEGHRVVVLEQNHD 46 (454)
Q Consensus 12 ~~~VvIIGa-G~aGl~aA~~l~~~g~~v~vie~~~~ 46 (454)
.++|+|.|| |.-|...+..|.+.|++|+++++...
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 368999999 99999999999999999999998653
No 494
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=91.25 E-value=0.17 Score=49.28 Aligned_cols=33 Identities=24% Similarity=0.369 Sum_probs=30.2
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
..+|+|||+|.-|+..|..|++ |++|+++|+++
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~ 68 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQ 68 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCH
T ss_pred CCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCH
Confidence 4589999999999999999998 99999999865
No 495
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=91.25 E-value=0.11 Score=52.10 Aligned_cols=33 Identities=15% Similarity=0.275 Sum_probs=30.5
Q ss_pred CeEEEEcCCCCHHHHHHHHhhhcCeEEEecccC
Q 044575 206 EVVVVVGNSLSGQDISMELVEVAKEVHLSAKSL 238 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~ 238 (454)
-.|+|||||.+|+-+|..|++.|.+|+++++.+
T Consensus 4 ~DVvIIGgGi~G~~~A~~La~~G~~V~llE~~~ 36 (501)
T 2qcu_A 4 KDLIVIGGGINGAGIAADAAGRGLSVLMLEAQD 36 (501)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCEEEEECCC
Confidence 369999999999999999999999999999864
No 496
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=91.21 E-value=0.11 Score=41.79 Aligned_cols=35 Identities=26% Similarity=0.315 Sum_probs=31.8
Q ss_pred CCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccCC
Q 044575 205 NEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSLN 239 (454)
Q Consensus 205 ~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~~ 239 (454)
.++++|+|+|..|..+|..|.+.|.+|+++.+.+.
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~ 40 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKE 40 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHH
Confidence 46899999999999999999999999999998654
No 497
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=91.14 E-value=0.11 Score=52.16 Aligned_cols=33 Identities=24% Similarity=0.206 Sum_probs=29.5
Q ss_pred CeEEEEcCCCCHHHHHHHHhh---hcCeEEEecccC
Q 044575 206 EVVVVVGNSLSGQDISMELVE---VAKEVHLSAKSL 238 (454)
Q Consensus 206 k~vvVVG~G~sg~e~A~~l~~---~~~~V~l~~r~~ 238 (454)
.+|+|||||.+|+-+|..|++ .|.+|+++++.+
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~ 38 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGN 38 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC--
T ss_pred ceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCC
Confidence 479999999999999999999 899999999864
No 498
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=91.06 E-value=0.12 Score=41.49 Aligned_cols=35 Identities=26% Similarity=0.258 Sum_probs=31.0
Q ss_pred CCCeEEEEcCCCCHHHHHHHHhhhcCeEEEecccC
Q 044575 204 RNEVVVVVGNSLSGQDISMELVEVAKEVHLSAKSL 238 (454)
Q Consensus 204 ~~k~vvVVG~G~sg~e~A~~l~~~~~~V~l~~r~~ 238 (454)
.+++|+|+|+|..|..++..|.+.|.+|+++.+.+
T Consensus 5 ~~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 5 KNKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred cCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 45789999999999999999999999999998754
No 499
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=91.02 E-value=0.23 Score=43.12 Aligned_cols=32 Identities=31% Similarity=0.562 Sum_probs=29.7
Q ss_pred cEEEECc-ChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 14 NVCVIGA-GPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 14 ~VvIIGa-G~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
+|+|+|| |.-|...++.|.+.|++|+++.|++
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 5999996 9999999999999999999999864
No 500
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=91.02 E-value=0.19 Score=49.67 Aligned_cols=34 Identities=29% Similarity=0.382 Sum_probs=31.5
Q ss_pred CCcEEEECcChHHHHHHHHHHHcCCcEEEEeeCC
Q 044575 12 SKNVCVIGAGPSGLVAARELRKEGHRVVVLEQNH 45 (454)
Q Consensus 12 ~~~VvIIGaG~aGl~aA~~l~~~g~~v~vie~~~ 45 (454)
.++|.|||+|.-|...|..|++.|++|+++|+++
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4679999999999999999999999999999864
Done!