BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044576
(141 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255585038|ref|XP_002533227.1| translation initiation factor if-3, putative [Ricinus communis]
gi|223526947|gb|EEF29148.1| translation initiation factor if-3, putative [Ricinus communis]
Length = 274
Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 117/132 (88%), Positives = 123/132 (93%)
Query: 10 KYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVN 69
KYRYE QKKKKGQQKKSAA RMDLKELKMGYNIDQHDY VRL+AARKFLKDGDKVKVIVN
Sbjct: 143 KYRYELQKKKKGQQKKSAATRMDLKELKMGYNIDQHDYDVRLRAARKFLKDGDKVKVIVN 202
Query: 70 LKGRENEFRNIAIELIRRFQNDVGELASEENKNFRDRNIFIILVPNKALLQKAQEPPKKK 129
LKGRENEFRNIAIELIRRFQNDVGELA+EE KNFRDRNIFI L PNKA+LQK+QEPPKK+
Sbjct: 203 LKGRENEFRNIAIELIRRFQNDVGELATEETKNFRDRNIFITLAPNKAILQKSQEPPKKR 262
Query: 130 DKQVVDEVSTGV 141
DK V+EVS GV
Sbjct: 263 DKSAVNEVSAGV 274
>gi|224143922|ref|XP_002325123.1| predicted protein [Populus trichocarpa]
gi|222866557|gb|EEF03688.1| predicted protein [Populus trichocarpa]
Length = 278
Score = 219 bits (559), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/132 (88%), Positives = 124/132 (93%)
Query: 10 KYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVN 69
K+RYEQQKKK+GQQKKSAA+RMDLKELKMGYNIDQHDY VRL+AARKFLKDGDKVKVIVN
Sbjct: 147 KFRYEQQKKKRGQQKKSAASRMDLKELKMGYNIDQHDYDVRLRAARKFLKDGDKVKVIVN 206
Query: 70 LKGRENEFRNIAIELIRRFQNDVGELASEENKNFRDRNIFIILVPNKALLQKAQEPPKKK 129
LKGRENEFRN AIEL+RRFQNDVGELA+EE+KNFRDRN FI LVPNKALLQKAQEPPKKK
Sbjct: 207 LKGRENEFRNNAIELLRRFQNDVGELATEESKNFRDRNAFITLVPNKALLQKAQEPPKKK 266
Query: 130 DKQVVDEVSTGV 141
DK DEVS GV
Sbjct: 267 DKSAADEVSAGV 278
>gi|449453964|ref|XP_004144726.1| PREDICTED: translation initiation factor IF-3-like [Cucumis
sativus]
Length = 299
Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 116/132 (87%), Positives = 123/132 (93%)
Query: 10 KYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVN 69
KYRYE QKKK+GQQKKSAA RMDLKELKMGYNIDQHDYSVRLKAA+KFLKDGDKVKVIVN
Sbjct: 168 KYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVN 227
Query: 70 LKGRENEFRNIAIELIRRFQNDVGELASEENKNFRDRNIFIILVPNKALLQKAQEPPKKK 129
LKGRENEFRNIAIELIRRFQ +VGELA+EE KNFRDRNIFI+LVPNKA+LQKAQEPPKKK
Sbjct: 228 LKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKK 287
Query: 130 DKQVVDEVSTGV 141
DK V+ VS V
Sbjct: 288 DKPAVNGVSASV 299
>gi|449511545|ref|XP_004163986.1| PREDICTED: LOW QUALITY PROTEIN: translation initiation factor
IF-3-like [Cucumis sativus]
Length = 299
Score = 214 bits (546), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 115/132 (87%), Positives = 122/132 (92%)
Query: 10 KYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVN 69
KYRYE QKKK+GQQKKSAA RMDLKELKMGYNIDQHDYSVRLKAA+KFLKDGDKVKVIVN
Sbjct: 168 KYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVN 227
Query: 70 LKGRENEFRNIAIELIRRFQNDVGELASEENKNFRDRNIFIILVPNKALLQKAQEPPKKK 129
LKGRENEFRNIAIELIRRFQ +VGELA+EE KNFRDRNIFI+LVPNKA+LQKAQEPPKK
Sbjct: 228 LKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKX 287
Query: 130 DKQVVDEVSTGV 141
DK V+ VS V
Sbjct: 288 DKPAVNGVSASV 299
>gi|363807493|ref|NP_001242651.1| uncharacterized protein LOC100780734 [Glycine max]
gi|255638877|gb|ACU19741.1| unknown [Glycine max]
Length = 275
Score = 209 bits (531), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 112/132 (84%), Positives = 119/132 (90%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SKYRYEQQKKK+GQQKKSAANRMDLKELKMGYNID+HDYSVRLKAA+KFLKDG+KVKVIV
Sbjct: 141 SKYRYEQQKKKRGQQKKSAANRMDLKELKMGYNIDEHDYSVRLKAAQKFLKDGNKVKVIV 200
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRDRNIFIILVPNKALLQKAQEPPKK 128
NLKGRENEFRN+AI LI RFQNDVGEL EE KNFRDRNIFIILVPNK +QK QEPPKK
Sbjct: 201 NLKGRENEFRNMAIALITRFQNDVGELGIEETKNFRDRNIFIILVPNKVAMQKTQEPPKK 260
Query: 129 KDKQVVDEVSTG 140
+DK DEVS
Sbjct: 261 RDKSAADEVSVS 272
>gi|225445818|ref|XP_002276984.1| PREDICTED: translation initiation factor IF-3 [Vitis vinifera]
gi|297743667|emb|CBI36550.3| unnamed protein product [Vitis vinifera]
Length = 272
Score = 208 bits (529), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 111/132 (84%), Positives = 119/132 (90%)
Query: 10 KYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVN 69
KYRYE QKKK+GQQKKSAANRMDLKELKMGYNID HDYSVRLKAARKFL+DGDKVK+IVN
Sbjct: 141 KYRYELQKKKRGQQKKSAANRMDLKELKMGYNIDSHDYSVRLKAARKFLQDGDKVKIIVN 200
Query: 70 LKGRENEFRNIAIELIRRFQNDVGELASEENKNFRDRNIFIILVPNKALLQKAQEPPKKK 129
LKGRENEFRNIAIELIRRFQNDVGELA+EE+KNF RNIFI+LVPNKALLQK QE KK
Sbjct: 201 LKGRENEFRNIAIELIRRFQNDVGELATEESKNFSVRNIFIVLVPNKALLQKGQESSKKT 260
Query: 130 DKQVVDEVSTGV 141
+K E+S GV
Sbjct: 261 EKSAATEISAGV 272
>gi|356500687|ref|XP_003519163.1| PREDICTED: translation initiation factor IF-3-like isoform 1
[Glycine max]
Length = 275
Score = 206 bits (524), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 111/130 (85%), Positives = 118/130 (90%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SKYRYEQQKKK+ QQKKSAANRMDLKELKMGYNID+HDYSVRLKAA+KFLKDGDKVKVIV
Sbjct: 141 SKYRYEQQKKKREQQKKSAANRMDLKELKMGYNIDEHDYSVRLKAAQKFLKDGDKVKVIV 200
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRDRNIFIILVPNKALLQKAQEPPKK 128
NLKGRENEFRN+AI LI RFQNDVGEL EE KNFRDRNIFIILVPNK +QK QEPPKK
Sbjct: 201 NLKGRENEFRNMAIGLITRFQNDVGELGIEETKNFRDRNIFIILVPNKVAVQKTQEPPKK 260
Query: 129 KDKQVVDEVS 138
+DK DEV+
Sbjct: 261 RDKSAADEVT 270
>gi|351720878|ref|NP_001236679.1| uncharacterized protein LOC100499836 [Glycine max]
gi|255627037|gb|ACU13863.1| unknown [Glycine max]
Length = 243
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 97/117 (82%), Positives = 107/117 (91%)
Query: 25 KSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIEL 84
+SAANRMDLKELKMGYNIDQHDYSVRLKAA+KFLKDGDKVKVIVNLKGRE EFRNIAIEL
Sbjct: 124 RSAANRMDLKELKMGYNIDQHDYSVRLKAAQKFLKDGDKVKVIVNLKGRETEFRNIAIEL 183
Query: 85 IRRFQNDVGELASEENKNFRDRNIFIILVPNKALLQKAQEPPKKKDKQVVDEVSTGV 141
I+RFQ+DVGELA+EE K+FRDRN+ I++VP KA LQKAQEPPK+KD DEVS GV
Sbjct: 184 IKRFQSDVGELATEETKSFRDRNMSIVMVPKKAALQKAQEPPKRKDMSAADEVSAGV 240
>gi|357479997|ref|XP_003610284.1| Translation initiation factor IF-3 [Medicago truncatula]
gi|355511339|gb|AES92481.1| Translation initiation factor IF-3 [Medicago truncatula]
Length = 266
Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 106/133 (79%), Positives = 113/133 (84%), Gaps = 3/133 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SKYRYE QKKK+ QQKKSAA+RMDLKELKMGYNIDQHDYSVRLKAARKFL DGDKVKVIV
Sbjct: 135 SKYRYELQKKKRDQQKKSAASRMDLKELKMGYNIDQHDYSVRLKAARKFLSDGDKVKVIV 194
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRDRNIFIILVPNKALLQKAQEPPKK 128
NLKGRE EFRN AIELIRRFQNDVG+LA+EE KNFRD+NIFI L+PNK +QK QE P K
Sbjct: 195 NLKGREKEFRNNAIELIRRFQNDVGKLATEEAKNFRDKNIFITLIPNKTEVQKPQETPTK 254
Query: 129 KDKQVVDEVSTGV 141
DEVS V
Sbjct: 255 A---ATDEVSVSV 264
>gi|297821667|ref|XP_002878716.1| hypothetical protein ARALYDRAFT_481264 [Arabidopsis lyrata subsp.
lyrata]
gi|297324555|gb|EFH54975.1| hypothetical protein ARALYDRAFT_481264 [Arabidopsis lyrata subsp.
lyrata]
Length = 292
Score = 188 bits (478), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 102/133 (76%), Positives = 120/133 (90%), Gaps = 3/133 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SKYRYEQQK+KK QQKK+ RMDLKELKMGYNIDQHDYSVRL+AA+KFL+DGDKVKVIV
Sbjct: 149 SKYRYEQQKRKKDQQKKT--TRMDLKELKMGYNIDQHDYSVRLRAAQKFLQDGDKVKVIV 206
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRDRNIFIILVPNKALLQKAQEPP-K 127
++KGRENEFRNIAIEL+RRFQ ++GELA+EE+KNFRDRN+FIILVPNK +++K QEPP +
Sbjct: 207 SMKGRENEFRNIAIELLRRFQTEIGELATEESKNFRDRNLFIILVPNKEMIRKPQEPPSR 266
Query: 128 KKDKQVVDEVSTG 140
KK KQ +EVS
Sbjct: 267 KKKKQSENEVSAA 279
>gi|15224088|ref|NP_179984.1| translation initiation factor IF-3 [Arabidopsis thaliana]
gi|3738333|gb|AAC63674.1| putative chloroplast initiation factor 3 [Arabidopsis thaliana]
gi|18176092|gb|AAL59982.1| putative chloroplast initiation factor 3 [Arabidopsis thaliana]
gi|20465301|gb|AAM20054.1| putative chloroplast initiation factor 3 [Arabidopsis thaliana]
gi|21593709|gb|AAM65676.1| putative chloroplast initiation factor 3 [Arabidopsis thaliana]
gi|330252430|gb|AEC07524.1| translation initiation factor IF-3 [Arabidopsis thaliana]
Length = 312
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 97/125 (77%), Positives = 115/125 (92%), Gaps = 2/125 (1%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SKYRYEQQK+KK QQKK+ RMDLKELKMGYNIDQHDYSVRL+AA+KFL+DGDKVKVIV
Sbjct: 147 SKYRYEQQKRKKDQQKKT--TRMDLKELKMGYNIDQHDYSVRLRAAQKFLQDGDKVKVIV 204
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRDRNIFIILVPNKALLQKAQEPPKK 128
++KGRENEFRNIAIEL+RRFQ ++GELA+EE+KNFRDRN+FIILVPNK +++K QEPP +
Sbjct: 205 SMKGRENEFRNIAIELLRRFQTEIGELATEESKNFRDRNMFIILVPNKEMIRKPQEPPTR 264
Query: 129 KDKQV 133
K K+
Sbjct: 265 KKKKT 269
>gi|224088324|ref|XP_002308411.1| predicted protein [Populus trichocarpa]
gi|222854387|gb|EEE91934.1| predicted protein [Populus trichocarpa]
Length = 208
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 102/134 (76%), Positives = 114/134 (85%), Gaps = 1/134 (0%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRM-DLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
+K+RYE QKKK+ QQKKSA + +ELKMGYNIDQHDY VRL+AA+ FLKDGDKVKVI
Sbjct: 37 NKFRYEPQKKKREQQKKSAGECLFYFRELKMGYNIDQHDYDVRLRAAQNFLKDGDKVKVI 96
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRDRNIFIILVPNKALLQKAQEPPK 127
VNL RENEFRNIAIELIRRFQN VGELA+EE+KNF DRNIFI LVPNKA+LQKA EPPK
Sbjct: 97 VNLNWRENEFRNIAIELIRRFQNFVGELATEESKNFHDRNIFISLVPNKAILQKALEPPK 156
Query: 128 KKDKQVVDEVSTGV 141
KKDK +EVS G+
Sbjct: 157 KKDKSAANEVSAGM 170
>gi|297802960|ref|XP_002869364.1| hypothetical protein ARALYDRAFT_491684 [Arabidopsis lyrata subsp.
lyrata]
gi|297315200|gb|EFH45623.1| hypothetical protein ARALYDRAFT_491684 [Arabidopsis lyrata subsp.
lyrata]
Length = 288
Score = 175 bits (444), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 93/116 (80%), Positives = 108/116 (93%), Gaps = 2/116 (1%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SKYRYEQQK+KK QQKK+ RMDLKELKMGYNIDQHDYSVR++AARKFL+DGDKVKVIV
Sbjct: 150 SKYRYEQQKRKKEQQKKT--TRMDLKELKMGYNIDQHDYSVRMRAARKFLQDGDKVKVIV 207
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRDRNIFIILVPNKALLQKAQE 124
N+KGRENEFRNIAIEL+RRFQ ++GELA+EE+KNFRDRN+FI LVPNK +++K QE
Sbjct: 208 NMKGRENEFRNIAIELLRRFQTEIGELATEESKNFRDRNLFITLVPNKEVIRKVQE 263
>gi|18417644|ref|NP_567851.1| translation initiation factor IF-3 [Arabidopsis thaliana]
gi|14596121|gb|AAK68788.1| putative protein [Arabidopsis thaliana]
gi|18377498|gb|AAL66915.1| putative protein [Arabidopsis thaliana]
gi|332660396|gb|AEE85796.1| translation initiation factor IF-3 [Arabidopsis thaliana]
Length = 281
Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/116 (79%), Positives = 108/116 (93%), Gaps = 2/116 (1%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SKYRYEQQK+KK QQKK+ RMDLKELKMGYNIDQHDYSVR++AARKFL+DGDKVKVIV
Sbjct: 143 SKYRYEQQKRKKEQQKKT--TRMDLKELKMGYNIDQHDYSVRMRAARKFLQDGDKVKVIV 200
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRDRNIFIILVPNKALLQKAQE 124
N+KGRENEFRNIAIEL+RRFQ ++GEL +EE+KNFRDRN+FI+LVPNK +++K QE
Sbjct: 201 NMKGRENEFRNIAIELLRRFQTEIGELGTEESKNFRDRNLFIVLVPNKEVIRKVQE 256
>gi|356514517|ref|XP_003525952.1| PREDICTED: translation initiation factor IF-3-like [Glycine max]
Length = 151
Score = 171 bits (433), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 82/102 (80%), Positives = 93/102 (91%), Gaps = 2/102 (1%)
Query: 40 YNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQNDVGELASEE 99
YNIDQHDYS+RLKAA++FLKDG VKV+VNLKGRENEFRNIAIELI+RFQ+DVGELA+EE
Sbjct: 49 YNIDQHDYSLRLKAAQRFLKDG--VKVVVNLKGRENEFRNIAIELIKRFQSDVGELATEE 106
Query: 100 NKNFRDRNIFIILVPNKALLQKAQEPPKKKDKQVVDEVSTGV 141
K+FRDRNIF ++VP KA LQKAQEPPK+KDK VDEVS GV
Sbjct: 107 TKSFRDRNIFRVMVPKKATLQKAQEPPKRKDKSAVDEVSAGV 148
>gi|356500689|ref|XP_003519164.1| PREDICTED: translation initiation factor IF-3-like isoform 2
[Glycine max]
Length = 245
Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 82/99 (82%), Positives = 88/99 (88%)
Query: 40 YNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQNDVGELASEE 99
YNID+HDYSVRLKAA+KFLKDGDKVKVIVNLKGRENEFRN+AI LI RFQNDVGEL EE
Sbjct: 142 YNIDEHDYSVRLKAAQKFLKDGDKVKVIVNLKGRENEFRNMAIGLITRFQNDVGELGIEE 201
Query: 100 NKNFRDRNIFIILVPNKALLQKAQEPPKKKDKQVVDEVS 138
KNFRDRNIFIILVPNK +QK QEPPKK+DK DEV+
Sbjct: 202 TKNFRDRNIFIILVPNKVAVQKTQEPPKKRDKSAADEVT 240
>gi|115449193|ref|NP_001048376.1| Os02g0794400 [Oryza sativa Japonica Group]
gi|47497598|dbj|BAD19668.1| translation initiation factor IF-3-like [Oryza sativa Japonica
Group]
gi|113537907|dbj|BAF10290.1| Os02g0794400 [Oryza sativa Japonica Group]
Length = 200
Score = 162 bits (410), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 88/126 (69%), Positives = 108/126 (85%)
Query: 10 KYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVN 69
K++YEQQKKK+ QQK+S A RM LKELKMGYNID HDYSVRLKAARKFLK GDKVK++VN
Sbjct: 43 KHKYEQQKKKRTQQKRSVAKRMGLKELKMGYNIDIHDYSVRLKAARKFLKAGDKVKIMVN 102
Query: 70 LKGRENEFRNIAIELIRRFQNDVGELASEENKNFRDRNIFIILVPNKALLQKAQEPPKKK 129
LKGREN ++ AIEL+RRFQNDVGE+A+EE+KNF++RNI+++LVPNK +QK Q+ KK
Sbjct: 103 LKGRENLYKKQAIELLRRFQNDVGEMATEESKNFQERNIYLVLVPNKIAIQKEQDELNKK 162
Query: 130 DKQVVD 135
D + D
Sbjct: 163 DTAIED 168
>gi|222623832|gb|EEE57964.1| hypothetical protein OsJ_08701 [Oryza sativa Japonica Group]
Length = 305
Score = 162 bits (409), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 88/126 (69%), Positives = 108/126 (85%)
Query: 10 KYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVN 69
K++YEQQKKK+ QQK+S A RM LKELKMGYNID HDYSVRLKAARKFLK GDKVK++VN
Sbjct: 148 KHKYEQQKKKRTQQKRSVAKRMGLKELKMGYNIDIHDYSVRLKAARKFLKAGDKVKIMVN 207
Query: 70 LKGRENEFRNIAIELIRRFQNDVGELASEENKNFRDRNIFIILVPNKALLQKAQEPPKKK 129
LKGREN ++ AIEL+RRFQNDVGE+A+EE+KNF++RNI+++LVPNK +QK Q+ KK
Sbjct: 208 LKGRENLYKKQAIELLRRFQNDVGEMATEESKNFQERNIYLVLVPNKIAIQKEQDELNKK 267
Query: 130 DKQVVD 135
D + D
Sbjct: 268 DTAIED 273
>gi|218191737|gb|EEC74164.1| hypothetical protein OsI_09264 [Oryza sativa Indica Group]
Length = 305
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/126 (69%), Positives = 107/126 (84%)
Query: 10 KYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVN 69
K++YEQQKKK+ QQK+S A RM LKELKMGYNID HDYSVRLKAARKFLK GDKVK++VN
Sbjct: 148 KHKYEQQKKKRTQQKRSVAKRMGLKELKMGYNIDIHDYSVRLKAARKFLKAGDKVKIMVN 207
Query: 70 LKGRENEFRNIAIELIRRFQNDVGELASEENKNFRDRNIFIILVPNKALLQKAQEPPKKK 129
LKGREN ++ AIEL+RRFQNDVGE+A+EE+KNF++RNI+++LVPNK +QK Q+ KK
Sbjct: 208 LKGRENLYKKQAIELLRRFQNDVGEMATEESKNFQERNIYLVLVPNKIAIQKEQDELNKK 267
Query: 130 DKQVVD 135
D D
Sbjct: 268 DTATED 273
>gi|212722014|ref|NP_001131934.1| uncharacterized protein LOC100193325 [Zea mays]
gi|194692956|gb|ACF80562.1| unknown [Zea mays]
Length = 317
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 87/115 (75%), Positives = 102/115 (88%)
Query: 10 KYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVN 69
K+RYEQQKKKK QQK+S A RM LKELKMGYNID HDYSVRLKAA+KFLK GDKVK+IVN
Sbjct: 153 KHRYEQQKKKKIQQKRSVAKRMGLKELKMGYNIDIHDYSVRLKAAKKFLKAGDKVKIIVN 212
Query: 70 LKGRENEFRNIAIELIRRFQNDVGELASEENKNFRDRNIFIILVPNKALLQKAQE 124
LKGREN ++ AIEL+RRFQNDVGELA+EE+KNF +RNI+++LVPNK +QK Q+
Sbjct: 213 LKGRENLYKKEAIELLRRFQNDVGELATEESKNFAERNIYLVLVPNKIAIQKEQD 267
>gi|387764693|gb|AFJ95143.1| EMB12 [Zea mays]
Length = 319
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 87/115 (75%), Positives = 102/115 (88%)
Query: 10 KYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVN 69
K+RYEQQKKKK QQK+S A RM LKELKMGYNID HDYSVRLKAA+KFLK GDKVK+IVN
Sbjct: 155 KHRYEQQKKKKIQQKRSVAKRMGLKELKMGYNIDIHDYSVRLKAAKKFLKAGDKVKIIVN 214
Query: 70 LKGRENEFRNIAIELIRRFQNDVGELASEENKNFRDRNIFIILVPNKALLQKAQE 124
LKGREN ++ AIEL+RRFQNDVGELA+EE+KNF +RNI+++LVPNK +QK Q+
Sbjct: 215 LKGRENLYKKEAIELLRRFQNDVGELATEESKNFAERNIYLVLVPNKIAIQKEQD 269
>gi|242066810|ref|XP_002454694.1| hypothetical protein SORBIDRAFT_04g035750 [Sorghum bicolor]
gi|241934525|gb|EES07670.1| hypothetical protein SORBIDRAFT_04g035750 [Sorghum bicolor]
Length = 314
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 87/115 (75%), Positives = 102/115 (88%)
Query: 10 KYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVN 69
K+RYEQQKKKK QQK+S A RM LKELKMGYNID HDYSVRLKAA+KFLK GDKVK+IVN
Sbjct: 154 KHRYEQQKKKKIQQKRSVAKRMGLKELKMGYNIDIHDYSVRLKAAKKFLKAGDKVKIIVN 213
Query: 70 LKGRENEFRNIAIELIRRFQNDVGELASEENKNFRDRNIFIILVPNKALLQKAQE 124
LKGREN ++ AIEL+RRFQNDVGELA+EE+KNF +RNI+++LVPNK +QK Q+
Sbjct: 214 LKGRENLYKKEAIELLRRFQNDVGELATEESKNFAERNIYLVLVPNKIAIQKEQD 268
>gi|413939301|gb|AFW73852.1| hypothetical protein ZEAMMB73_275939 [Zea mays]
Length = 317
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 87/115 (75%), Positives = 102/115 (88%)
Query: 10 KYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVN 69
K+RYEQQKKKK QQK+S A RM LKELKMGYNID HDYSVRLKAA+KFLK GDKVK+IVN
Sbjct: 153 KHRYEQQKKKKIQQKRSVAKRMGLKELKMGYNIDIHDYSVRLKAAKKFLKAGDKVKIIVN 212
Query: 70 LKGRENEFRNIAIELIRRFQNDVGELASEENKNFRDRNIFIILVPNKALLQKAQE 124
LKGREN ++ AIEL+RRFQNDVGELA+EE+KNF +RNI+++LVPNK +QK Q+
Sbjct: 213 LKGRENLYKKEAIELLRRFQNDVGELATEESKNFAERNIYLVLVPNKIAIQKEQD 267
>gi|357137407|ref|XP_003570292.1| PREDICTED: translation initiation factor IF-3-like [Brachypodium
distachyon]
Length = 321
Score = 155 bits (393), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 86/121 (71%), Positives = 102/121 (84%)
Query: 10 KYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVN 69
K++YEQQKKK+ QQK+S A RM LKELKMGYNID HDYSVRL+AA+KFLK GDKVK++VN
Sbjct: 149 KHKYEQQKKKRVQQKRSVAKRMGLKELKMGYNIDIHDYSVRLRAAKKFLKAGDKVKIMVN 208
Query: 70 LKGRENEFRNIAIELIRRFQNDVGELASEENKNFRDRNIFIILVPNKALLQKAQEPPKKK 129
LKGREN ++ AIELIRRFQ DVGELA+E KNF +RNI++ILVPNK +QK Q+ KK
Sbjct: 209 LKGRENLYKKQAIELIRRFQTDVGELATEGGKNFAERNIYVILVPNKLAIQKEQDGVNKK 268
Query: 130 D 130
D
Sbjct: 269 D 269
>gi|334187038|ref|NP_001190874.1| translation initiation factor IF-3 [Arabidopsis thaliana]
gi|332660397|gb|AEE85797.1| translation initiation factor IF-3 [Arabidopsis thaliana]
Length = 253
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 67/92 (72%), Positives = 84/92 (91%)
Query: 33 LKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQNDV 92
++ + YNIDQHDYSVR++AARKFL+DGDKVKVIVN+KGRENEFRNIAIEL+RRFQ ++
Sbjct: 137 VRMMDYSYNIDQHDYSVRMRAARKFLQDGDKVKVIVNMKGRENEFRNIAIELLRRFQTEI 196
Query: 93 GELASEENKNFRDRNIFIILVPNKALLQKAQE 124
GEL +EE+KNFRDRN+FI+LVPNK +++K QE
Sbjct: 197 GELGTEESKNFRDRNLFIVLVPNKEVIRKVQE 228
>gi|357479999|ref|XP_003610285.1| Translation initiation factor IF-3 [Medicago truncatula]
gi|355511340|gb|AES92482.1| Translation initiation factor IF-3 [Medicago truncatula]
Length = 232
Score = 142 bits (357), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 78/88 (88%), Positives = 82/88 (93%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SKYRYE QKKK+ QQKKSAA+RMDLKELKMGYNIDQHDYSVRLKAARKFL DGDKVKVIV
Sbjct: 135 SKYRYELQKKKRDQQKKSAASRMDLKELKMGYNIDQHDYSVRLKAARKFLSDGDKVKVIV 194
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA 96
NLKGRE EFRN AIELIRRFQNDVG++
Sbjct: 195 NLKGREKEFRNNAIELIRRFQNDVGKVC 222
>gi|168061315|ref|XP_001782635.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665868|gb|EDQ52538.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 315
Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 68/125 (54%), Positives = 89/125 (71%), Gaps = 2/125 (1%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SKYRYE QKKK+ QKK+ A+R DLKELKM YNID HDY VRL++A KFLKDGDKVKV+
Sbjct: 163 SKYRYEAQKKKREAQKKAIASRQDLKELKMRYNIDTHDYQVRLRSAMKFLKDGDKVKVVC 222
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVPNKALLQKAQEPPK 127
KGRE +F+++A +L ++F +D+GEL E+K R + ++L PNK + K Q P K
Sbjct: 223 QFKGREMDFKDLAFKLFQKFIDDIGELGVVESKMAIEGRQMIMLLGPNKTAVAKLQ-PEK 281
Query: 128 KKDKQ 132
+K
Sbjct: 282 STEKS 286
>gi|168039904|ref|XP_001772436.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676233|gb|EDQ62718.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 421
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/121 (54%), Positives = 87/121 (71%), Gaps = 6/121 (4%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDK----- 63
SK+RYE QKKK+ QKK+ A+R DLKELK+ YNID HDY VRL++A+KFLKDGDK
Sbjct: 254 SKFRYEAQKKKREAQKKALASRQDLKELKIRYNIDVHDYDVRLRSAKKFLKDGDKVDICH 313
Query: 64 VKVIVNLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVPNKALLQKA 122
VKV+ KGRE +F+++A +L +RF +DVGEL E+K R + ++L PNKA + K
Sbjct: 314 VKVVCQFKGREMDFKDLAFKLFQRFIDDVGELGLIESKPAIEGRQMIMMLGPNKAAVAKL 373
Query: 123 Q 123
Q
Sbjct: 374 Q 374
>gi|308802129|ref|XP_003078378.1| translation initiation factor IF-3 (ISS) [Ostreococcus tauri]
gi|116056830|emb|CAL53119.1| translation initiation factor IF-3 (ISS) [Ostreococcus tauri]
Length = 266
Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/116 (50%), Positives = 82/116 (70%), Gaps = 1/116 (0%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SK++YEQ+K + +KK+AA R+DLKELKM YNID HDY VRL++A KFL+ GDKVKVI
Sbjct: 149 SKFKYEQEKSAREARKKAAATRVDLKELKMRYNIDTHDYEVRLRSALKFLEGGDKVKVIC 208
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVPNKALLQKAQ 123
+GREN+FR I E+ RF D+GE+ EN+ N ++ +I+ P + ++AQ
Sbjct: 209 QFRGRENDFREIGREMFARFVEDIGEVGVLENRPNMEGNSMTMIISPAVSKAERAQ 264
>gi|255080936|ref|XP_002504034.1| initiation factor [Micromonas sp. RCC299]
gi|226519301|gb|ACO65292.1| initiation factor [Micromonas sp. RCC299]
Length = 255
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/125 (46%), Positives = 87/125 (69%), Gaps = 2/125 (1%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SK++YE +KK + +KK+AA+R+++KELKM YNID HDY VRL+AA+KFL GD+VKVI
Sbjct: 63 SKFKYENEKKARETRKKAAASRVEVKELKMRYNIDVHDYGVRLRAAQKFLGAGDRVKVIC 122
Query: 69 NLKGRENEFRNIAIELIRRFQNDVG-ELASEENKNFRDRN-IFIILVPNKALLQKAQEPP 126
+GRENEFR++ ++ RF +DVG +L + + + N + ++L P K AQ+ P
Sbjct: 123 QFRGRENEFRDLGRDMFMRFVDDVGADLCNLDGSPSMEGNRMVMLLSPVKEKRAVAQDGP 182
Query: 127 KKKDK 131
++ K
Sbjct: 183 SRRKK 187
>gi|302762997|ref|XP_002964920.1| hypothetical protein SELMODRAFT_439129 [Selaginella moellendorffii]
gi|302809619|ref|XP_002986502.1| hypothetical protein SELMODRAFT_425482 [Selaginella moellendorffii]
gi|300145685|gb|EFJ12359.1| hypothetical protein SELMODRAFT_425482 [Selaginella moellendorffii]
gi|300167153|gb|EFJ33758.1| hypothetical protein SELMODRAFT_439129 [Selaginella moellendorffii]
Length = 430
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 79/111 (71%), Gaps = 4/111 (3%)
Query: 27 AANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIR 86
++R+++KELKM YNID HDY VRLK A+ FLKDGDKVKV + +GRE +F+++ ++L+R
Sbjct: 182 GSSRVEIKELKMRYNIDTHDYEVRLKQAKNFLKDGDKVKVFMPFRGREAQFKDLGVKLLR 241
Query: 87 RFQNDVGELASEENKNFRD-RNIFIILVPNKALLQKAQEPPKKKDKQVVDE 136
+F+ D+GE+ S ENK + R +++ L PNK K++ K K +Q DE
Sbjct: 242 KFEEDIGEMGSLENKLADEGRTMYMTLAPNKIQASKSE---KSKPRQSKDE 289
>gi|145344485|ref|XP_001416762.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576988|gb|ABO95055.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 177
Score = 105 bits (261), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 54/96 (56%), Positives = 70/96 (72%), Gaps = 1/96 (1%)
Query: 23 QKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAI 82
+KK+AA R+D+KELKM YNID HDY VRL+AA+KFL+ GDKVKVI +GREN+FR I
Sbjct: 77 RKKAAAVRVDIKELKMRYNIDTHDYGVRLRAAQKFLEGGDKVKVICQFRGRENDFREIGR 136
Query: 83 ELIRRFQNDVGELASEENKNFRDRN-IFIILVPNKA 117
E+ RF DVGE+ S E+K + N + ++L P A
Sbjct: 137 EMFARFVEDVGEVGSLESKPSMEGNSMTMLLAPTVA 172
>gi|303271103|ref|XP_003054913.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462887|gb|EEH60165.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 175
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/112 (46%), Positives = 79/112 (70%), Gaps = 4/112 (3%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SKY+YEQ+KK++ +K++AA R+++KELKM YNID HDY VRLKAA+KFL GD+VK++
Sbjct: 64 SKYKYEQEKKQRETRKRAAATRIEVKELKMRYNIDSHDYMVRLKAAKKFLDGGDRVKLVC 123
Query: 69 NLKGRENEFRNIAIELIRRFQNDVG---ELAS-EENKNFRDRNIFIILVPNK 116
+GRENEFR++ ++ +F +D +L + E N + + ++L P K
Sbjct: 124 QFRGRENEFRDMGRDMFMKFVDDCNSDEDLCTLEGNPSMEGNRMVMVLGPVK 175
>gi|428769412|ref|YP_007161202.1| translation initiation factor 3 (bIF-3) [Cyanobacterium aponinum
PCC 10605]
gi|428683691|gb|AFZ53158.1| bacterial translation initiation factor 3 (bIF-3) [Cyanobacterium
aponinum PCC 10605]
Length = 179
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 74/110 (67%), Gaps = 3/110 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+++EQ+KK + +KK + D+KE+KM Y ID+HDY VRL A++FLK GDKVK +
Sbjct: 72 GKFKFEQEKKARAIRKKQ--HTADVKEVKMRYKIDEHDYQVRLNQAKRFLKAGDKVKATI 129
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNKA 117
N +GRE + ++ EL+ R D+GE+A + + ++ RN+ ++L P KA
Sbjct: 130 NFRGREAQHTHLGQELLERLAEDLGEMAEVQQRPKKEGRNMIMLLSPKKA 179
>gi|428774444|ref|YP_007166232.1| translation initiation factor 3 (bIF-3) [Cyanobacterium stanieri
PCC 7202]
gi|428688723|gb|AFZ48583.1| bacterial translation initiation factor 3 (bIF-3) [Cyanobacterium
stanieri PCC 7202]
Length = 177
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 72/109 (66%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY++EQ+KK + +KK + DLKE+KM Y ID+HDY VR+ A++FLK GDKVK +
Sbjct: 71 GKYKFEQEKKARAIKKKQ--HTADLKEVKMRYKIDEHDYQVRVNQAKRFLKSGDKVKATI 128
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
N +GRE + ++ EL+ R D+ E+A + K ++ RN+ ++L P K
Sbjct: 129 NFRGREAQHVHLGQELLERMAQDLAEMAEIQQKPKKEGRNMIMLLSPKK 177
>gi|384247388|gb|EIE20875.1| initiation factor 3, partial [Coccomyxa subellipsoidea C-169]
Length = 162
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/111 (45%), Positives = 68/111 (61%), Gaps = 1/111 (0%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SKY++EQ K K KK R DLKELK + D HDY VRL+AA+KF+ GDKVK+ +
Sbjct: 50 SKYKFEQAKASKEASKKQREARQDLKELKFRPSTDVHDYQVRLRAAQKFIAKGDKVKLTL 109
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASE-ENKNFRDRNIFIILVPNKAL 118
KGRE +F+ I +L ++F DVGE A ++ + ++L PNK L
Sbjct: 110 TFKGREMQFQEIGKDLFKKFVEDVGENAVVIQDARMMGNQMTLLLSPNKNL 160
>gi|119490629|ref|ZP_01623034.1| translation initiation factor IF-3 [Lyngbya sp. PCC 8106]
gi|119453794|gb|EAW34951.1| translation initiation factor IF-3 [Lyngbya sp. PCC 8106]
Length = 178
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 70/110 (63%), Gaps = 3/110 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY++EQ+K+ + +KK + D+KE+KM Y ID HDY VR++ A +FLK GDKVK +
Sbjct: 71 GKYKFEQEKRAREAKKKQ--HNADVKEVKMRYKIDDHDYQVRVRQAERFLKSGDKVKATI 128
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKA 117
+GRE + N+A EL+ R D+GELA ++ R + ++L P K+
Sbjct: 129 MFRGREIQHSNLAKELLNRMATDLGELAEVQQYPKQEGRTMMMLLSPKKS 178
>gi|219117177|ref|XP_002179383.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409274|gb|EEC49206.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 186
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 69/107 (64%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SKYRY+ +KK K +K S ++KE+KM Y ID HDYSVR K+A KFLK G++VK V
Sbjct: 81 SKYRYQLEKKAKEVKKNSKGT--EIKEVKMSYKIDVHDYSVRKKSASKFLKQGNRVKCTV 138
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
+GRE + N+ +L+ R +++ E E+K R+ RN+ +IL P
Sbjct: 139 MFRGREVQHDNLGFDLLNRLASELEEYCMTESKPKREGRNLSLILTP 185
>gi|254410410|ref|ZP_05024189.1| translation initiation factor IF-3 [Coleofasciculus chthonoplastes
PCC 7420]
gi|196182616|gb|EDX77601.1| translation initiation factor IF-3 [Coleofasciculus chthonoplastes
PCC 7420]
Length = 175
Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 71/109 (65%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY++EQ+KK + +KK + D+KE+KM Y ID HDY VR+ AAR+FLK GDKVK +
Sbjct: 69 GKYKFEQEKKAREARKKQ--HTADVKEVKMRYKIDDHDYQVRVNAARRFLKSGDKVKATI 126
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + N+A +L++R D+ ++A + R+ RN+ ++L K
Sbjct: 127 TFRGREIQHANLAEDLLKRMATDLQDVAEVQQAPKREGRNMMMLLSSKK 175
>gi|220905883|ref|YP_002481194.1| translation initiation factor IF-3 [Cyanothece sp. PCC 7425]
gi|219862494|gb|ACL42833.1| translation initiation factor IF-3 [Cyanothece sp. PCC 7425]
Length = 179
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 69/109 (63%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY++EQ+KK + +KK + D+KE+KM Y ID+HDY VR+ A +FLKDGDKVK +
Sbjct: 73 GKYKFEQEKKAREARKKQ--HTADVKEVKMRYRIDEHDYKVRINHAERFLKDGDKVKATI 130
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNK 116
KGRE + ++A EL+ R D+ +A ++ RN+ ++L P K
Sbjct: 131 TFKGREIQHSHLAEELLNRMAADLQAVAEIQQAPKKEGRNMIMLLAPKK 179
>gi|170079295|ref|YP_001735933.1| translation initiation factor IF-3 [Synechococcus sp. PCC 7002]
gi|238692800|sp|B1XM04.1|IF3_SYNP2 RecName: Full=Translation initiation factor IF-3
gi|169886964|gb|ACB00678.1| translation initiation factor IF-3 [Synechococcus sp. PCC 7002]
Length = 178
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 73/110 (66%), Gaps = 3/110 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY++EQ+K+ + +KK + DLKE+KM Y I++HDY VR+ +A++FLK GDKVK +
Sbjct: 70 GKYKFEQEKRAREAKKKQ--HNADLKEVKMRYKIEEHDYQVRVNSAQRFLKSGDKVKATI 127
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNKA 117
+GRE + N+A +L+ R D+ E+ + + R+ RN+ +IL P K+
Sbjct: 128 TFRGREIQHSNLAQKLLDRMAKDLEEVGEIQQRPKREGRNMMMILAPKKS 177
>gi|424513639|emb|CCO66261.1| translation initiation factor IF-3 [Bathycoccus prasinos]
Length = 403
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Query: 29 NRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRF 88
+++LKE+KM YNID HDY VRL++++KFL +GDKVKVI +GREN+FR+I E+ RF
Sbjct: 265 TQVELKEVKMRYNIDTHDYDVRLRSSQKFLSNGDKVKVICQFRGRENDFRHIGREMFDRF 324
Query: 89 QNDVGELASEENKNFRDRNIFII-LVP 114
D+ E + E + + N + +VP
Sbjct: 325 MEDIEEYGTLEKQPGMEGNAMTMYIVP 351
>gi|428220904|ref|YP_007105074.1| translation initiation factor IF-3 [Synechococcus sp. PCC 7502]
gi|427994244|gb|AFY72939.1| translation initiation factor IF-3 [Synechococcus sp. PCC 7502]
Length = 173
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 72/109 (66%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+++EQ+KK + +KK + +D+KE+KM Y I++HDY VR+ A +FLK+GDKVK V
Sbjct: 67 GKFKFEQEKKAREARKKQ--HTVDVKEVKMRYKIEEHDYQVRINHAERFLKEGDKVKATV 124
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
KGRE + ++A EL+ R D+G +A + R+ RNI +++ P K
Sbjct: 125 MFKGREIQHADLAEELLNRMAVDLGPIAEIQQAPKREGRNITMLMAPKK 173
>gi|256751282|ref|ZP_05492162.1| translation initiation factor IF-3 [Thermoanaerobacter ethanolicus
CCSD1]
gi|256749837|gb|EEU62861.1| translation initiation factor IF-3 [Thermoanaerobacter ethanolicus
CCSD1]
Length = 141
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 72/109 (66%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYRYE K++K +KK +++KE++M NI+ HD+ V+L++A KFLK+GDKVKV +
Sbjct: 35 GKYRYELSKREKEAKKKQKV--INVKEIRMSPNIEDHDFGVKLRSAIKFLKEGDKVKVTI 92
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGEL-ASEENKNFRDRNIFIILVPNK 116
+GRE ++A +L++RF ++ E A E+ N RN+ ++L P K
Sbjct: 93 RFRGREAVHTSLAEDLLKRFAEELDEYGAIEKAPNMEGRNLIMVLTPRK 141
>gi|354568223|ref|ZP_08987389.1| Translation initiation factor IF-3 [Fischerella sp. JSC-11]
gi|353541188|gb|EHC10658.1| Translation initiation factor IF-3 [Fischerella sp. JSC-11]
Length = 177
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 73/109 (66%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY++EQ+KK + +KK + D+KE+KM Y I++HDY+VR+K A +FLKDGDKVK V
Sbjct: 71 GKYKFEQEKKAREARKKQ--HTADVKEVKMRYKIEEHDYNVRVKQAERFLKDGDKVKATV 128
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + ++A +L++R D+ +A + ++ RN+ ++L P K
Sbjct: 129 MFRGREIQHSDLAEDLLKRMATDLEAVAEVQQAPKKEGRNMMMLLSPKK 177
>gi|428299546|ref|YP_007137852.1| translation initiation factor 3 (bIF-3) [Calothrix sp. PCC 6303]
gi|428236090|gb|AFZ01880.1| bacterial translation initiation factor 3 (bIF-3) [Calothrix sp.
PCC 6303]
Length = 177
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 72/109 (66%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY++EQ+KK + +KK + D+KE+KM Y I++HDY+VR+K A +FLKDGDKVK V
Sbjct: 71 GKYKFEQEKKAREARKKQ--HTADVKEVKMRYKIEEHDYNVRVKQAERFLKDGDKVKATV 128
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + ++A L++R ND+ L + ++ RN+ +++ P K
Sbjct: 129 MFRGREIQHSDLAEHLLKRMANDLEPLGEVQQAPKKEGRNMMMLISPKK 177
>gi|167040677|ref|YP_001663662.1| translation initiation factor IF-3 [Thermoanaerobacter sp. X514]
gi|289578712|ref|YP_003477339.1| translation initiation factor IF-3 [Thermoanaerobacter italicus
Ab9]
gi|300914718|ref|ZP_07132034.1| translation initiation factor IF-3 [Thermoanaerobacter sp. X561]
gi|166854917|gb|ABY93326.1| translation initiation factor IF-3 [Thermoanaerobacter sp. X514]
gi|289528425|gb|ADD02777.1| translation initiation factor IF-3 [Thermoanaerobacter italicus
Ab9]
gi|300889653|gb|EFK84799.1| translation initiation factor IF-3 [Thermoanaerobacter sp. X561]
Length = 152
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 72/109 (66%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYRYE K++K +KK +++KE++M NI+ HD+ V+L++A KFLK+GDKVKV +
Sbjct: 46 GKYRYELSKREKEAKKKQKV--INVKEIRMSPNIEDHDFGVKLRSAIKFLKEGDKVKVTI 103
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGEL-ASEENKNFRDRNIFIILVPNK 116
+GRE ++A +L++RF ++ E A E+ N RN+ ++L P K
Sbjct: 104 RFRGREAVHTSLAEDLLKRFAEELDEYGAIEKAPNMEGRNLIMVLTPRK 152
>gi|30468064|ref|NP_848951.1| translation initiation factor 3 [Cyanidioschyzon merolae strain
10D]
gi|39931520|sp|Q85G77.1|IF3C_CYAME RecName: Full=Translation initiation factor IF-3, chloroplastic
gi|30409164|dbj|BAC76113.1| initiation factor 3 (chloroplast) [Cyanidioschyzon merolae strain
10D]
Length = 175
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 69/110 (62%), Gaps = 5/110 (4%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY++E +KK K ++K N+ LKE++M YN+++HDY VRL A KFLK GDKVKV +
Sbjct: 70 GKYKFELEKKAKAKRK----NQSQLKEIQMSYNMEEHDYQVRLSQACKFLKAGDKVKVTL 125
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNKA 117
LKGRE + +A + +FQ DV LA ++ RN+ I VP K+
Sbjct: 126 MLKGREMQHLELAQNKMAQFQADVSSLAQLAKPPSQEGRNLSAIFVPKKS 175
>gi|427715625|ref|YP_007063619.1| translation initiation factor 3 (bIF-3) [Calothrix sp. PCC 7507]
gi|427348061|gb|AFY30785.1| bacterial translation initiation factor 3 (bIF-3) [Calothrix sp.
PCC 7507]
Length = 177
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 72/111 (64%), Gaps = 7/111 (6%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY++EQ+KK + +KK + D+KE+KM Y I++HDY+VR+K A +FLKDGDKVK V
Sbjct: 71 GKYKFEQEKKAREARKKQ--HTADVKEVKMRYKIEEHDYNVRVKQAERFLKDGDKVKATV 128
Query: 69 NLKGRENEFRNIAIELIRRFQNDV---GELASEENKNFRDRNIFIILVPNK 116
+GRE + ++A EL++R D+ GE+ K RN+ +++ P K
Sbjct: 129 MFRGREIQHSDLAEELLKRMATDLEPFGEVQQAPKKE--GRNMMMLISPKK 177
>gi|186686412|ref|YP_001869608.1| translation initiation factor IF-3 [Nostoc punctiforme PCC 73102]
gi|238691747|sp|B2IY66.1|IF3_NOSP7 RecName: Full=Translation initiation factor IF-3
gi|186468864|gb|ACC84665.1| translation initiation factor IF-3 [Nostoc punctiforme PCC 73102]
Length = 177
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 72/111 (64%), Gaps = 7/111 (6%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY++EQ+KK + +KK + D+KE+KM Y I++HDY+VR+K A +FLKDGDKVK V
Sbjct: 71 GKYKFEQEKKAREARKKQ--HTADVKEVKMRYKIEEHDYNVRVKQAERFLKDGDKVKATV 128
Query: 69 NLKGRENEFRNIAIELIRRFQNDV---GELASEENKNFRDRNIFIILVPNK 116
+GRE + ++A +L++R D+ GEL K RN+ +++ P K
Sbjct: 129 MFRGREIQHSDLAEDLLKRMATDLEPFGELQQAPKKE--GRNMMMLISPKK 177
>gi|365855341|ref|ZP_09395395.1| translation initiation factor IF-3 [Acetobacteraceae bacterium
AT-5844]
gi|363719263|gb|EHM02573.1| translation initiation factor IF-3 [Acetobacteraceae bacterium
AT-5844]
Length = 162
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 72/107 (67%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YEQQKK +KK +++KE+K+ NID HDY V+++AA+ FL++GDKVKV +
Sbjct: 57 GKYKYEQQKKANEARKKQKI--VEIKEIKVRPNIDDHDYDVKMRAAKGFLEEGDKVKVTL 114
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE +++ ++++ R + ++GELA E+ +R + ++L P
Sbjct: 115 RFRGREMAHQDLGVKVLERIRTELGELAKVEQMPRLENRQMIMVLAP 161
>gi|297544946|ref|YP_003677248.1| translation initiation factor IF-3 [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|307724048|ref|YP_003903799.1| translation initiation factor IF-3 [Thermoanaerobacter sp. X513]
gi|296842721|gb|ADH61237.1| translation initiation factor IF-3 [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|307581109|gb|ADN54508.1| translation initiation factor IF-3 [Thermoanaerobacter sp. X513]
Length = 183
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 72/110 (65%), Gaps = 3/110 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
KYRYE K++K +KK +++KE++M NI+ HD+ V+L++A KFLK+GDKVKV
Sbjct: 76 FGKYRYELSKREKEAKKKQKV--INVKEIRMSPNIEDHDFGVKLRSAIKFLKEGDKVKVT 133
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGEL-ASEENKNFRDRNIFIILVPNK 116
+ +GRE ++A +L++RF ++ E A E+ N RN+ ++L P K
Sbjct: 134 IRFRGREAVHTSLAEDLLKRFAEELDEYGAIEKAPNMEGRNLIMVLTPRK 183
>gi|434406095|ref|YP_007148980.1| bacterial translation initiation factor 3 (bIF-3) [Cylindrospermum
stagnale PCC 7417]
gi|428260350|gb|AFZ26300.1| bacterial translation initiation factor 3 (bIF-3) [Cylindrospermum
stagnale PCC 7417]
Length = 177
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 72/111 (64%), Gaps = 7/111 (6%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY++EQ+KK + +KK + D+KE+KM Y I++HDY+VR+K A +FLKDGDKVK V
Sbjct: 71 GKYKFEQEKKAREARKKQ--HTADVKEVKMRYKIEEHDYNVRVKQAERFLKDGDKVKATV 128
Query: 69 NLKGRENEFRNIAIELIRRFQNDV---GELASEENKNFRDRNIFIILVPNK 116
+GRE + ++A +L++R D+ GE+ K RN+ ++L P K
Sbjct: 129 MFRGREIQHSDLAEDLLKRMATDLEPFGEVQQAPKKE--GRNMMMLLSPKK 177
>gi|414079363|ref|YP_007000787.1| translation initiation factor IF-3 [Anabaena sp. 90]
gi|413972642|gb|AFW96730.1| translation initiation factor IF-3 [Anabaena sp. 90]
Length = 177
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 71/111 (63%), Gaps = 7/111 (6%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY++EQ+KK + +KK + D+KE+KM Y I++HDY+VR+K A +FLKDGDKVK V
Sbjct: 71 GKYKFEQEKKAREARKKQ--HTADVKEVKMRYKIEEHDYNVRVKQAERFLKDGDKVKATV 128
Query: 69 NLKGRENEFRNIAIELIRRFQNDV---GELASEENKNFRDRNIFIILVPNK 116
+GRE + ++A L++R D+ GEL K RN+ +++ P K
Sbjct: 129 MFRGREIQHSDLAETLLKRMATDLEPFGELQQAPKKE--GRNMMMLISPKK 177
>gi|298492834|ref|YP_003723011.1| translation initiation factor IF-3 ['Nostoc azollae' 0708]
gi|298234752|gb|ADI65888.1| translation initiation factor IF-3 ['Nostoc azollae' 0708]
Length = 177
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 73/111 (65%), Gaps = 7/111 (6%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY++EQ+KK + +KK + D+KE+KM Y I++HDY+VR+K A +FLKDGDKVK V
Sbjct: 71 GKYKFEQEKKAREARKKQ--HTADVKEVKMRYKIEEHDYNVRVKQAERFLKDGDKVKATV 128
Query: 69 NLKGRENEFRNIAIELIRRFQNDV---GELASEENKNFRDRNIFIILVPNK 116
+GRE + ++A EL++R +D+ GE+ K RN+ +++ P +
Sbjct: 129 MFRGREIQHSDLAEELLKRMASDLEPFGEVQQAPKKE--GRNMMMLISPKR 177
>gi|409990990|ref|ZP_11274294.1| translation initiation factor IF-3 [Arthrospira platensis str.
Paraca]
gi|291570597|dbj|BAI92869.1| translation initiation factor IF-3 [Arthrospira platensis NIES-39]
gi|409938151|gb|EKN79511.1| translation initiation factor IF-3 [Arthrospira platensis str.
Paraca]
Length = 181
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 70/110 (63%), Gaps = 3/110 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YEQ+KK + +KK + D+KE+KM Y ID HDY VR+ A++FLK GDKVK +
Sbjct: 71 GKFKYEQEKKVREARKKQ--HTADVKEVKMRYKIDDHDYQVRVNQAKRFLKSGDKVKATI 128
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKA 117
+GRE + N+A EL++R D+ E A +++ R++ ++L P K
Sbjct: 129 MFRGREIQHSNLARELLKRMAEDLEEHAEVQQSPKQEGRSMMMLLAPKKT 178
>gi|119510904|ref|ZP_01630027.1| translation initiation factor IF-3 [Nodularia spumigena CCY9414]
gi|119464432|gb|EAW45346.1| translation initiation factor IF-3 [Nodularia spumigena CCY9414]
Length = 177
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 71/111 (63%), Gaps = 7/111 (6%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY++EQ+KK + +KK + D+KE+KM Y I++HDY+VR+K A +FLKDGDKVK V
Sbjct: 71 GKYKFEQEKKAREARKKQ--HTADVKEVKMRYKIEEHDYNVRVKQAERFLKDGDKVKATV 128
Query: 69 NLKGRENEFRNIAIELIRRFQND---VGELASEENKNFRDRNIFIILVPNK 116
+GRE + ++A L++R D +GEL K RN+ +++ P K
Sbjct: 129 MFRGREIQHSDLAEHLLKRMAKDLEPLGELQQAPKKE--GRNMMMLISPKK 177
>gi|167037184|ref|YP_001664762.1| translation initiation factor IF-3 [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|326391475|ref|ZP_08213010.1| translation initiation factor IF-3 [Thermoanaerobacter ethanolicus
JW 200]
gi|166856018|gb|ABY94426.1| translation initiation factor IF-3 [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|325992501|gb|EGD50958.1| translation initiation factor IF-3 [Thermoanaerobacter ethanolicus
JW 200]
Length = 141
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 70/107 (65%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYRYE K++K +KK +++KE++M I+ HD+ V+LK+A KFLK+G+KVKV +
Sbjct: 35 GKYRYELSKREKEAKKKQKI--INVKEIRMSPTIEDHDFGVKLKSAIKFLKEGNKVKVTI 92
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE ++A +L++RF N++ E E+ N RN+ ++L P
Sbjct: 93 RFRGREAAHTSLAEDLLKRFANELSEYGVIEKAPNIEGRNLMMVLTP 139
>gi|75908259|ref|YP_322555.1| translation initiation factor IF-3 [Anabaena variabilis ATCC 29413]
gi|20138475|sp|Q8YNE3.1|IF3_ANASP RecName: Full=Translation initiation factor IF-3
gi|123758829|sp|Q3MBH6.1|IF3_ANAVT RecName: Full=Translation initiation factor IF-3
gi|75701984|gb|ABA21660.1| bacterial translation initiation factor 3 (bIF-3) [Anabaena
variabilis ATCC 29413]
Length = 177
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 72/111 (64%), Gaps = 7/111 (6%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY++EQ+KK + +KK + D+KE+KM Y I++HDY+VR+K A +FLKDGDKVK V
Sbjct: 71 GKYKFEQEKKAREARKKQ--HTADVKEVKMRYKIEEHDYNVRVKQAERFLKDGDKVKATV 128
Query: 69 NLKGRENEFRNIAIELIRRFQNDV---GELASEENKNFRDRNIFIILVPNK 116
+GRE + ++A +L++R D+ GE+ K RN+ +++ P K
Sbjct: 129 MFRGREIQHSDLAEDLLKRMATDLEPFGEVQQAPKKE--GRNMMMLISPKK 177
>gi|17232115|ref|NP_488663.1| translation initiation factor IF-3 [Nostoc sp. PCC 7120]
gi|17133760|dbj|BAB76322.1| translation initiation factor IF-3 [Nostoc sp. PCC 7120]
Length = 204
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 72/111 (64%), Gaps = 7/111 (6%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY++EQ+KK + +KK + D+KE+KM Y I++HDY+VR+K A +FLKDGDKVK V
Sbjct: 98 GKYKFEQEKKAREARKKQ--HTADVKEVKMRYKIEEHDYNVRVKQAERFLKDGDKVKATV 155
Query: 69 NLKGRENEFRNIAIELIRRFQNDV---GELASEENKNFRDRNIFIILVPNK 116
+GRE + ++A +L++R D+ GE+ K RN+ +++ P K
Sbjct: 156 MFRGREIQHSDLAEDLLKRMATDLEPFGEVQQAPKKE--GRNMMMLISPKK 204
>gi|359398306|ref|ZP_09191328.1| translation initiation factor IF-3 [Novosphingobium
pentaromativorans US6-1]
gi|357600313|gb|EHJ62010.1| translation initiation factor IF-3 [Novosphingobium
pentaromativorans US6-1]
Length = 173
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 66/111 (59%), Gaps = 3/111 (2%)
Query: 5 YFFLSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKV 64
+ + KYRYE QKK +K ++KE+KM NID HDY V+++ ++F+ DGDKV
Sbjct: 64 FLDVGKYRYEAQKKANAARKTQKTQ--EIKEIKMRPNIDDHDYDVKMRNVQRFIGDGDKV 121
Query: 65 KVIVNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
KV + +GRE + + ++L+RR Q DV E+A E R + ++L P
Sbjct: 122 KVTLRFRGRELSHQQLGMDLLRRVQADVEEIAKIEAYPRMEGRQMLMVLAP 172
>gi|427706427|ref|YP_007048804.1| translation initiation factor 3 (bIF-3) [Nostoc sp. PCC 7107]
gi|427358932|gb|AFY41654.1| bacterial translation initiation factor 3 (bIF-3) [Nostoc sp. PCC
7107]
Length = 177
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 72/111 (64%), Gaps = 7/111 (6%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY++EQ+KK + +KK + D+KE+KM Y I++HDY+VR+K A +FLKDGDKVK V
Sbjct: 71 GKYKFEQEKKAREARKKQ--HTADVKEVKMRYKIEEHDYNVRVKQAERFLKDGDKVKATV 128
Query: 69 NLKGRENEFRNIAIELIRRFQNDV---GELASEENKNFRDRNIFIILVPNK 116
+GRE + ++A +L++R D+ GE+ K RN+ +++ P K
Sbjct: 129 MFRGREIQHSDLAEDLLKRMATDLEPFGEVQQAPKKE--GRNMMMLISPKK 177
>gi|334140417|ref|YP_004533619.1| translation initiation factor IF-3 [Novosphingobium sp. PP1Y]
gi|333938443|emb|CCA91801.1| translation initiation factor IF-3 [Novosphingobium sp. PP1Y]
Length = 172
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 66/111 (59%), Gaps = 3/111 (2%)
Query: 5 YFFLSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKV 64
+ + KYRYE QKK +K ++KE+KM NID HDY V+++ ++F+ DGDKV
Sbjct: 63 FLDVGKYRYEAQKKANAARKTQKTQ--EIKEIKMRPNIDDHDYDVKMRNVQRFIGDGDKV 120
Query: 65 KVIVNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
KV + +GRE + + ++L+RR Q DV E+A E R + ++L P
Sbjct: 121 KVTLRFRGRELSHQQLGMDLLRRVQADVEEIAKIEAYPRMEGRQMLMVLAP 171
>gi|326387119|ref|ZP_08208729.1| translation initiation factor IF-3 [Novosphingobium nitrogenifigens
DSM 19370]
gi|326208300|gb|EGD59107.1| translation initiation factor IF-3 [Novosphingobium nitrogenifigens
DSM 19370]
Length = 159
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 66/111 (59%), Gaps = 3/111 (2%)
Query: 5 YFFLSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKV 64
+ + KYRYE QKK +K ++KE+KM NID HDY V+L+ +F+++GDKV
Sbjct: 50 FLDVGKYRYEAQKKANAARKTQRTQ--EIKEIKMRPNIDDHDYDVKLRNVHRFIEEGDKV 107
Query: 65 KVIVNLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVP 114
KV + +GRE + + + L+RR Q+DV E+A E R + ++L P
Sbjct: 108 KVTLRFRGRELSHQQLGMNLLRRVQDDVAEIAKVEAFPRMEGRQMLMVLSP 158
>gi|428308989|ref|YP_007119966.1| translation initiation factor 3 (bIF-3) [Microcoleus sp. PCC 7113]
gi|428250601|gb|AFZ16560.1| bacterial translation initiation factor 3 (bIF-3) [Microcoleus sp.
PCC 7113]
Length = 175
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 71/109 (65%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY++EQ+KK + +KK + D+KE+KM Y I++HDY VR+ A +FLK GDKVK +
Sbjct: 69 GKYKFEQEKKAREARKKQ--HTADVKEVKMRYKIEEHDYQVRVNQAERFLKSGDKVKATI 126
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + ++A +L++R D+ ELA + R+ RN+ ++L P K
Sbjct: 127 TFRGREIQHSDLAEDLLKRMAMDLEELAEVQQLPKREGRNMMMLLSPKK 175
>gi|427729940|ref|YP_007076177.1| translation initiation factor IF-3 [Nostoc sp. PCC 7524]
gi|427365859|gb|AFY48580.1| translation initiation factor IF-3 [Nostoc sp. PCC 7524]
Length = 177
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 71/111 (63%), Gaps = 7/111 (6%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY++EQ+KK + +KK + D+KE+KM Y I++HDY+VR+K A +FLKDGDKVK V
Sbjct: 71 GKYKFEQEKKAREARKKQ--HTADVKEVKMRYKIEEHDYNVRVKQAERFLKDGDKVKATV 128
Query: 69 NLKGRENEFRNIAIELIRRFQNDV---GELASEENKNFRDRNIFIILVPNK 116
+GRE + ++A L++R D+ GE+ K RN+ +++ P K
Sbjct: 129 MFRGREIQHSDLAETLLKRMATDLEPFGEVQQAPKKE--GRNMMMLISPKK 177
>gi|428207336|ref|YP_007091689.1| translation initiation factor 3 (bIF-3) [Chroococcidiopsis
thermalis PCC 7203]
gi|428009257|gb|AFY87820.1| bacterial translation initiation factor 3 (bIF-3)
[Chroococcidiopsis thermalis PCC 7203]
Length = 178
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 69/111 (62%), Gaps = 7/111 (6%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY++EQ+KK + +KK + D+KE+KM Y I++HDY VR+ A +FLKDGDKVK V
Sbjct: 72 GKYKFEQEKKAREARKKQ--HTADVKEVKMRYKIEEHDYRVRVNQAERFLKDGDKVKATV 129
Query: 69 NLKGRENEFRNIAIELIRRFQND---VGELASEENKNFRDRNIFIILVPNK 116
+GRE + ++A L++R D VGEL K RN+ +++ P K
Sbjct: 130 MFRGREIQHSDLAETLLKRMATDLQEVGELQQAPKKE--GRNMMMLISPKK 178
>gi|392940291|ref|ZP_10305935.1| translation initiation factor IF-3 [Thermoanaerobacter siderophilus
SR4]
gi|392292041|gb|EIW00485.1| translation initiation factor IF-3 [Thermoanaerobacter siderophilus
SR4]
Length = 169
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 70/107 (65%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYRYE K++K +KK +++KE++M I+ HD+ V+LK+A KFLK+G+KVKV +
Sbjct: 63 GKYRYELSKREKEAKKKQKI--INVKEIRMSPTIEDHDFGVKLKSAIKFLKEGNKVKVTI 120
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE ++A +L++RF N++ E E+ N RN+ ++L P
Sbjct: 121 RFRGREAAHTSLAEDLLKRFANELSEYGVIEKAPNIEGRNLMMVLTP 167
>gi|320115602|ref|YP_004185761.1| translation initiation factor IF-3 [Thermoanaerobacter brockii
subsp. finnii Ako-1]
gi|345017986|ref|YP_004820339.1| translation initiation factor IF-3 [Thermoanaerobacter wiegelii
Rt8.B1]
gi|319928693|gb|ADV79378.1| translation initiation factor IF-3 [Thermoanaerobacter brockii
subsp. finnii Ako-1]
gi|344033329|gb|AEM79055.1| Translation initiation factor IF-3 [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 183
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 70/108 (64%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
KYRYE K++K +KK +++KE++M I+ HD+ V+LK+A KFLK+G+KVKV
Sbjct: 76 FGKYRYELSKREKEAKKKQKI--INVKEIRMSPTIEDHDFGVKLKSAIKFLKEGNKVKVT 133
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE ++A +L++RF N++ E E+ N RN+ ++L P
Sbjct: 134 IRFRGREAAHTSLAEDLLKRFANELSEYGVIEKAPNIEGRNLMMVLTP 181
>gi|85710710|ref|ZP_01041774.1| translation initiation factor 3 [Erythrobacter sp. NAP1]
gi|85687888|gb|EAQ27893.1| translation initiation factor 3 [Erythrobacter sp. NAP1]
Length = 172
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 65/111 (58%), Gaps = 3/111 (2%)
Query: 5 YFFLSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKV 64
+ + KYRYE QKK +K D+KE+KM NID HDY V+++ KF+ GDKV
Sbjct: 63 FLDVGKYRYEAQKKANAARKTQKTQ--DIKEVKMRPNIDTHDYDVKMRNVNKFIDQGDKV 120
Query: 65 KVIVNLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVP 114
KV + +GRE +++ ++L++R Q DV E+A E R + ++L P
Sbjct: 121 KVTLRFRGREMAHQHLGMDLLKRVQEDVEEIAKVEAFPRLEGRQMLMVLAP 171
>gi|334120872|ref|ZP_08494949.1| Translation initiation factor IF-3 [Microcoleus vaginatus FGP-2]
gi|428317388|ref|YP_007115270.1| bacterial translation initiation factor 3 (bIF-3) [Oscillatoria
nigro-viridis PCC 7112]
gi|333455871|gb|EGK84511.1| Translation initiation factor IF-3 [Microcoleus vaginatus FGP-2]
gi|428241068|gb|AFZ06854.1| bacterial translation initiation factor 3 (bIF-3) [Oscillatoria
nigro-viridis PCC 7112]
Length = 178
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 72/109 (66%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY++EQ+KK + ++K + D+KE+KM Y I++HDY VRLK A +F+K GDKVK +
Sbjct: 71 GKYKFEQEKKAREAKRKQ--HTADVKEVKMRYKIEEHDYQVRLKLADRFIKSGDKVKATI 128
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + N+A +L++R D+ E+A + ++ R++ ++L P K
Sbjct: 129 MFRGREIQHSNLAEDLLKRMATDLQEIAEVQQAPKKEGRSMMMLLSPKK 177
>gi|209523635|ref|ZP_03272189.1| translation initiation factor IF-3 [Arthrospira maxima CS-328]
gi|376004300|ref|ZP_09782025.1| translation initiation factor IF-3 [Arthrospira sp. PCC 8005]
gi|423065927|ref|ZP_17054717.1| translation initiation factor IF-3 [Arthrospira platensis C1]
gi|209496040|gb|EDZ96341.1| translation initiation factor IF-3 [Arthrospira maxima CS-328]
gi|375327319|emb|CCE17778.1| translation initiation factor IF-3 [Arthrospira sp. PCC 8005]
gi|406712685|gb|EKD07869.1| translation initiation factor IF-3 [Arthrospira platensis C1]
Length = 180
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 70/110 (63%), Gaps = 3/110 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YEQ+KK + +KK + D+KE+KM Y ID HDY VR+ A++FLK GDKVK +
Sbjct: 71 GKFKYEQEKKVREARKKQ--HTADVKEVKMRYKIDDHDYQVRVNQAKRFLKSGDKVKATI 128
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKA 117
+GRE + N+A EL++R D+ E A +++ R++ ++L P K
Sbjct: 129 MFRGREIQHSNLARELLKRMAVDLEEHAEVQQSPKQEGRSMMMLLAPKKT 178
>gi|20808119|ref|NP_623290.1| translation initiation factor IF-3 [Thermoanaerobacter
tengcongensis MB4]
gi|22095768|sp|Q8R9C2.1|IF3_THETN RecName: Full=Translation initiation factor IF-3
gi|20516706|gb|AAM24894.1| Translation initiation factor IF3 [Thermoanaerobacter tengcongensis
MB4]
Length = 180
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 71/110 (64%), Gaps = 3/110 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
KYRYE K++K +KK +++KE++M NI+ HD+ V+LK+A KFLKDGDKVKV
Sbjct: 72 FGKYRYELSKREKEAKKKQKI--INVKEIRMSPNIEDHDFGVKLKSAIKFLKDGDKVKVT 129
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+ +GRE ++A +L++RF ++ E + E D RN+ +++ P K
Sbjct: 130 IRFRGREAAHTSLAEDLLKRFAEELREYGNVEKAPSMDGRNMMMVIAPKK 179
>gi|393773066|ref|ZP_10361465.1| translation initiation factor IF-3 [Novosphingobium sp. Rr 2-17]
gi|392721448|gb|EIZ78914.1| translation initiation factor IF-3 [Novosphingobium sp. Rr 2-17]
Length = 173
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 65/111 (58%), Gaps = 3/111 (2%)
Query: 5 YFFLSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKV 64
+ + KYRYE QKK +K ++KE+KM NID HDY +++ +F++DGDKV
Sbjct: 64 FLDVGKYRYEAQKKANAARKSQKTQ--EIKEIKMRPNIDDHDYDTKMRNVVRFIEDGDKV 121
Query: 65 KVIVNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
KV + +GRE + + ++L+RR Q DV E+A E R + ++L P
Sbjct: 122 KVTLRFRGRELSHQQLGMDLLRRVQEDVSEIAKIEAYPRMEGRQMLMVLSP 172
>gi|440680735|ref|YP_007155530.1| bacterial translation initiation factor 3 (bIF-3) [Anabaena
cylindrica PCC 7122]
gi|428677854|gb|AFZ56620.1| bacterial translation initiation factor 3 (bIF-3) [Anabaena
cylindrica PCC 7122]
Length = 177
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 70/109 (64%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY++EQ+KK + +KK + D+KE+KM Y I++HDY VR+K A +FLKDGDKVK V
Sbjct: 71 GKYKFEQEKKAREARKKQ--HTADVKEVKMRYKIEEHDYLVRVKQAERFLKDGDKVKATV 128
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + ++A L++R D+ L + ++ RN+ +++ P K
Sbjct: 129 MFRGREIQHSDLAETLLKRMATDLDALGEVQQAPKKEGRNMMMLISPKK 177
>gi|56751447|ref|YP_172148.1| translation initiation factor IF-3 [Synechococcus elongatus PCC
6301]
gi|81298876|ref|YP_399084.1| translation initiation factor IF-3 [Synechococcus elongatus PCC
7942]
gi|56686406|dbj|BAD79628.1| translation initiation factor IF-3 [Synechococcus elongatus PCC
6301]
gi|81167757|gb|ABB56097.1| bacterial translation initiation factor 3 (bIF-3) [Synechococcus
elongatus PCC 7942]
Length = 184
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 73/110 (66%), Gaps = 3/110 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY++EQ+K+ + +KK + +++KE+KM Y ID+HDY VR+ A++FLK GDKVK +
Sbjct: 75 GKYKFEQEKRAREARKKQ--HNVEVKEVKMRYKIDEHDYQVRVNQAQRFLKAGDKVKATI 132
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNKA 117
+GRE + ++A +L+ R +D+ EL + ++ RN+ ++L P KA
Sbjct: 133 TFRGREIQHTDLAQQLLMRLASDLKELGEVQQAPKKEGRNMMMMLGPKKA 182
>gi|37521325|ref|NP_924702.1| translation initiation factor IF-3 [Gloeobacter violaceus PCC 7421]
gi|39931208|sp|Q7NJS6.1|IF3_GLOVI RecName: Full=Translation initiation factor IF-3
gi|35212322|dbj|BAC89697.1| translation initiation factor IF-3 [Gloeobacter violaceus PCC 7421]
Length = 199
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 68/110 (61%), Gaps = 3/110 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY++EQ+K+ K +KK + D+KE+KM Y I +HDY VRL+ +FLKDGDKVK +
Sbjct: 92 GKYKFEQEKRAKEARKKQ--HTADVKEVKMRYTIGEHDYQVRLRDTIRFLKDGDKVKATI 149
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKA 117
+GRE + N+A +L+ + D E+ ++ + RN+ +IL P +
Sbjct: 150 MFRGREIQHANLAKDLLMQLAADSAEIGEVQQEPSVEGRNMIMILSPKRT 199
>gi|427724237|ref|YP_007071514.1| translation initiation factor 3 (bIF-3) [Leptolyngbya sp. PCC 7376]
gi|427355957|gb|AFY38680.1| bacterial translation initiation factor 3 (bIF-3) [Leptolyngbya sp.
PCC 7376]
Length = 178
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 70/110 (63%), Gaps = 3/110 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY++EQ+K+ + +KK + DLKE+KM Y I++HDY VR+ A +FLK GDKVK +
Sbjct: 70 GKYKFEQEKRAREAKKKQ--HNADLKEVKMRYKIEEHDYQVRVNNALRFLKSGDKVKATI 127
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNKA 117
+GRE + N+A +L+ R D+ E+ + + R+ RN+ +I+ P K
Sbjct: 128 TFRGREIQHSNLAYKLLDRMAKDLEEVGEIQQRPKREGRNMMMIMAPKKV 177
>gi|293376472|ref|ZP_06622701.1| translation initiation factor IF-3 [Turicibacter sanguinis PC909]
gi|325842041|ref|ZP_08167578.1| translation initiation factor IF-3 [Turicibacter sp. HGF1]
gi|292644894|gb|EFF62975.1| translation initiation factor IF-3 [Turicibacter sanguinis PC909]
gi|325489763|gb|EGC92119.1| translation initiation factor IF-3 [Turicibacter sp. HGF1]
Length = 195
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYRYEQQ+ + +K + LKE+++ NIDQHD++ +LK A+KFL GDKVKV V
Sbjct: 88 GKYRYEQQRHAREARKNQVV--VSLKEVRLSPNIDQHDFNTKLKNAQKFLSKGDKVKVSV 145
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNK 116
KGRE ++ RF E+A E N R++F++L P K
Sbjct: 146 RFKGREIAHTEFGRNVLTRFAEGCAEIADLESNPKLDGRSMFLVLAPKK 194
>gi|296536618|ref|ZP_06898694.1| translation initiation factor IF3 [Roseomonas cervicalis ATCC
49957]
gi|296263052|gb|EFH09601.1| translation initiation factor IF3 [Roseomonas cervicalis ATCC
49957]
Length = 162
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 71/107 (66%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YEQQKK +KK +++KE+K+ NID HDY V+++AA+ F+++GDKVKV +
Sbjct: 57 GKYKYEQQKKANEARKKQKI--VEIKEIKVRPNIDDHDYDVKMRAAKSFIEEGDKVKVTL 114
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE +++ ++++ R + ++ ELA E+ +R + ++L P
Sbjct: 115 RFRGREMAHQDLGVKVLERIRTELAELAKVEQMPRLENRQMIMVLAP 161
>gi|427405585|ref|ZP_18895790.1| translation initiation factor IF-3 [Selenomonas sp. F0473]
gi|425708426|gb|EKU71465.1| translation initiation factor IF-3 [Selenomonas sp. F0473]
Length = 188
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 77/124 (62%), Gaps = 3/124 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+RYEQQK++K +KK + +KE+K+ NID+HD++V+LK A +F+++G+KVKV +
Sbjct: 59 GKFRYEQQKREKEAKKKQKT--ISIKEVKLRPNIDEHDFNVKLKNALRFVEEGNKVKVTI 116
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKALLQKAQEPPK 127
+GRE + ++ R +GEL + E +N+ +IL P KAQ+P K
Sbjct: 117 MFRGRELSHPELGRAVLDRVSERMGELVTIERGAKLEGKNMTMILSPKVQKPAKAQKPAK 176
Query: 128 KKDK 131
++DK
Sbjct: 177 QQDK 180
>gi|284928971|ref|YP_003421493.1| translation initiation factor 3 [cyanobacterium UCYN-A]
gi|284809430|gb|ADB95135.1| bacterial translation initiation factor 3 (bIF-3) [cyanobacterium
UCYN-A]
Length = 179
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 71/111 (63%), Gaps = 3/111 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY++EQ+KK + + K + D+KE+KM Y ID+HDY VR+ A++FLK GDKVK +
Sbjct: 70 GKYKFEQEKKAR--EAKKKQHTADVKEVKMRYKIDEHDYQVRVNQAKRFLKSGDKVKATI 127
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNKAL 118
+GRE + N+A EL+ R D+ ELA + R+ RN+ +++ P K L
Sbjct: 128 TFRGREIQHANLAQELLSRMAADLKELAEIQQAPKREGRNMMMLMSPKKEL 178
>gi|399064600|ref|ZP_10747497.1| translation initiation factor IF-3 [Novosphingobium sp. AP12]
gi|398030585|gb|EJL23994.1| translation initiation factor IF-3 [Novosphingobium sp. AP12]
Length = 173
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 64/111 (57%), Gaps = 3/111 (2%)
Query: 5 YFFLSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKV 64
+ + KYRYE QKK +K ++KE+KM NID HDY V+++ +F++DGDKV
Sbjct: 64 FLDVGKYRYEAQKKANAARKTQKTQ--EIKEIKMRPNIDDHDYDVKMRNIHRFIEDGDKV 121
Query: 65 KVIVNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
KV + +GRE + + ++L+RR Q D E A E R + ++L P
Sbjct: 122 KVTLRFRGRELSHQQLGMDLLRRVQTDCEETAKIEAYPRMEGRQMLMVLSP 172
>gi|282896200|ref|ZP_06304223.1| Initiation factor 3 [Raphidiopsis brookii D9]
gi|281198889|gb|EFA73767.1| Initiation factor 3 [Raphidiopsis brookii D9]
Length = 177
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 70/111 (63%), Gaps = 7/111 (6%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY++EQ+KK + +KK + D+KE+KM Y I++HDY+VR+K A +FLKDGDKVK V
Sbjct: 71 GKYKFEQEKKAREARKKQ--HTADVKEVKMRYKIEEHDYNVRVKQAERFLKDGDKVKATV 128
Query: 69 NLKGRENEFRNIAIELIRRFQNDV---GELASEENKNFRDRNIFIILVPNK 116
+GRE + ++A L+ R D+ GE+ K RN+ +++ P K
Sbjct: 129 MFRGREIQHSDLAETLLNRMATDLEPFGEIQQAPKKE--GRNMMMLISPKK 177
>gi|282901427|ref|ZP_06309352.1| Initiation factor 3 [Cylindrospermopsis raciborskii CS-505]
gi|281193706|gb|EFA68678.1| Initiation factor 3 [Cylindrospermopsis raciborskii CS-505]
Length = 177
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 70/111 (63%), Gaps = 7/111 (6%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY++EQ+KK + +KK + D+KE+KM Y I++HDY+VR+K A +FLKDGDKVK V
Sbjct: 71 GKYKFEQEKKAREARKKQ--HTADVKEVKMRYKIEEHDYNVRVKQAERFLKDGDKVKATV 128
Query: 69 NLKGRENEFRNIAIELIRRFQNDV---GELASEENKNFRDRNIFIILVPNK 116
+GRE + ++A L+ R D+ GE+ K RN+ +++ P K
Sbjct: 129 MFRGREIQHSDLAETLLNRMATDLEPFGEVQQAPKKE--GRNMMMLISPKK 177
>gi|428777858|ref|YP_007169645.1| translation initiation factor 3 (bIF-3) [Halothece sp. PCC 7418]
gi|428692137|gb|AFZ45431.1| bacterial translation initiation factor 3 (bIF-3) [Halothece sp.
PCC 7418]
Length = 176
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 71/109 (65%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YEQ+++ + +KK + ++KE+KM Y ID+HDY VR+ A++FLK GDKVK +
Sbjct: 69 GKYKYEQERRAREAKKKQ--HNAEVKEVKMRYKIDEHDYEVRVNQAKRFLKGGDKVKATI 126
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
N +GRE + ++A +L+ R D+ + A + R+ RN+ ++L P K
Sbjct: 127 NFRGREIQHVDLARDLLERMATDLKDTAEIQQSPKREGRNMIMLLSPKK 175
>gi|85374713|ref|YP_458775.1| translation initiation factor IF-3 [Erythrobacter litoralis
HTCC2594]
gi|84787796|gb|ABC63978.1| translation initiation factor 3 [Erythrobacter litoralis HTCC2594]
Length = 172
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 67/111 (60%), Gaps = 3/111 (2%)
Query: 5 YFFLSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKV 64
+ + KYRYE QKK +K D+KE+KM NID HDY V+++ KF+++GDKV
Sbjct: 63 FLDVGKYRYEAQKKANLARKTQKTQ--DIKEVKMRPNIDTHDYDVKMRNVNKFIENGDKV 120
Query: 65 KVIVNLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVP 114
KV + +GRE +N+ ++L+ R ++DV E+A E R + ++L P
Sbjct: 121 KVTLRFRGREMAHQNLGMDLLNRVRDDVEEIAKVEAFPRLEGRQMLMVLAP 171
>gi|402825712|ref|ZP_10874976.1| translation initiation factor IF-3 [Sphingomonas sp. LH128]
gi|402260750|gb|EJU10849.1| translation initiation factor IF-3 [Sphingomonas sp. LH128]
Length = 159
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 65/111 (58%), Gaps = 3/111 (2%)
Query: 5 YFFLSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKV 64
+ + KYRYE QKK +K ++KE+KM NID HDY +++ +F++DGDKV
Sbjct: 50 FLDVGKYRYEAQKKANAARKTQKTQ--EIKEIKMRPNIDDHDYDTKMRNVVRFIEDGDKV 107
Query: 65 KVIVNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
KV + +GRE + + ++L+RR Q DV E+A E R + ++L P
Sbjct: 108 KVTLRFRGRELSHQQLGMDLLRRVQQDVEEIAKIEAYPRMEGRQMLMVLSP 158
>gi|428779260|ref|YP_007171046.1| translation initiation factor IF-3 [Dactylococcopsis salina PCC
8305]
gi|428693539|gb|AFZ49689.1| translation initiation factor IF-3 [Dactylococcopsis salina PCC
8305]
Length = 176
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 71/109 (65%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YEQ+++ + +KK + ++KE+KM Y ID+HDY VR+ A++FLK GDKVK +
Sbjct: 69 GKYKYEQERRAREAKKKQ--HNAEVKEVKMRYKIDEHDYEVRVNQAKRFLKSGDKVKATI 126
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
N +GRE + ++A EL+ + D+ + A + R+ RN+ ++L P K
Sbjct: 127 NFRGREIQHSDLARELLEKMAIDLKDTAEIQQSPKREGRNMIMLLSPKK 175
>gi|407768269|ref|ZP_11115648.1| translation initiation factor IF-3 [Thalassospira xiamenensis M-5 =
DSM 17429]
gi|407288982|gb|EKF14459.1| translation initiation factor IF-3 [Thalassospira xiamenensis M-5 =
DSM 17429]
Length = 171
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 71/107 (66%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YEQ KK+ +KK +++KE+K+ NID HDY+V+L+AA+KFL GDKVKV +
Sbjct: 66 GKFKYEQSKKQNEAKKKQKV--IEVKEIKLRPNIDIHDYNVKLRAAQKFLGGGDKVKVTL 123
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILVP 114
+GRE +++ + +++RF D+ +LA +E+ R + ++L P
Sbjct: 124 RFRGREMAHQDLGLGMLQRFSGDLEDLAKTEQMPKMEGRIMIMVLAP 170
>gi|434394492|ref|YP_007129439.1| bacterial translation initiation factor 3 (bIF-3) [Gloeocapsa sp.
PCC 7428]
gi|428266333|gb|AFZ32279.1| bacterial translation initiation factor 3 (bIF-3) [Gloeocapsa sp.
PCC 7428]
Length = 175
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 70/111 (63%), Gaps = 7/111 (6%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY++EQ+KK + +KK + D+KE+KM Y I++HDY VR+ A++FLKDGDKVK V
Sbjct: 69 GKYKFEQEKKAREARKKQ--HTADVKEVKMRYKIEEHDYKVRVNQAQRFLKDGDKVKATV 126
Query: 69 NLKGRENEFRNIAIELIRRFQND---VGELASEENKNFRDRNIFIILVPNK 116
+GRE + ++A L++R D VGE+ K +N+ +++ P K
Sbjct: 127 MFRGREIQHSDLAETLLKRMATDLEQVGEVQQAPKKE--GKNMMMLIAPKK 175
>gi|378787270|gb|AFC39901.1| translation initiation factor 3 [Porphyra umbilicalis]
Length = 182
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 68/108 (62%), Gaps = 3/108 (2%)
Query: 10 KYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVN 69
KY++ Q+K+ + +KK + +KE+KM Y I++HDY VR+ A KFL+ GDKVK +
Sbjct: 75 KYKFTQEKRAREAKKKQ--HNSSIKEVKMRYKIEEHDYKVRINQASKFLQSGDKVKATIT 132
Query: 70 LKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + N+AI+L+ + D+ +A + RD RN+ ++L P K
Sbjct: 133 FRGREIQHSNLAIDLLNKMAADLVTIAEIQQAPSRDGRNVIMLLSPKK 180
>gi|443313913|ref|ZP_21043523.1| translation initiation factor IF-3 [Synechocystis sp. PCC 7509]
gi|442776326|gb|ELR86609.1| translation initiation factor IF-3 [Synechocystis sp. PCC 7509]
Length = 175
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 69/111 (62%), Gaps = 7/111 (6%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY++EQ+KK + +KK + D+KE+KM Y I++HDY VR+ A +FLKDGDKVK V
Sbjct: 69 GKYKFEQEKKAREARKKQ--HTADVKEVKMRYKIEEHDYKVRINQAERFLKDGDKVKATV 126
Query: 69 NLKGRENEFRNIAIELIRRFQNDV---GELASEENKNFRDRNIFIILVPNK 116
+GRE + ++A L++R D+ GE+ K RN+ +++ P K
Sbjct: 127 MFRGREIQHSDLAETLLKRMATDLQTFGEVQQAPKKE--GRNMMMLISPKK 175
>gi|319404957|emb|CBI78559.1| translation initiation factor IF-3 [Bartonella sp. AR 15-3]
Length = 164
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 68/108 (62%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y+ QKK +KK +++KE+KM N+D HDY V+LKA R+F+ +GDKVK+
Sbjct: 58 LGKLKYQNQKKAAETRKKQKT--IEIKEIKMRPNVDIHDYEVKLKAIRRFIDNGDKVKIT 115
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE +++ I+L++R + + E+A E F R I +++ P
Sbjct: 116 LRFRGREMAHQDLGIKLLQRVKENTSEIAKIESEPKFEGRQIMMVIAP 163
>gi|90994422|ref|YP_536912.1| translation initiation factor 3 [Pyropia yezoensis]
gi|115502191|sp|Q1XDQ6.1|IF3C_PORYE RecName: Full=Translation initiation factor IF-3, chloroplastic
gi|90818986|dbj|BAE92355.1| initiation factor 3 [Pyropia yezoensis]
Length = 182
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 69/108 (63%), Gaps = 3/108 (2%)
Query: 10 KYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVN 69
KY++ Q+K+ + +KK + +KE+KM Y I++HDY VR+ A KF++ GDKVK +
Sbjct: 75 KYKFTQEKRAREAKKKQ--HNSSIKEVKMRYKIEEHDYKVRINQASKFIQAGDKVKATIT 132
Query: 70 LKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + N+AI+L+ + +D+ +A + RD RN+ ++L P K
Sbjct: 133 FRGREIQHSNLAIDLLNKMASDLNAIAEIQQAPSRDGRNVIMLLSPKK 180
>gi|113953559|ref|YP_729327.1| translation initiation factor IF-3 [Synechococcus sp. CC9311]
gi|123328048|sp|Q0IDZ5.1|IF3_SYNS3 RecName: Full=Translation initiation factor IF-3
gi|113880910|gb|ABI45868.1| translation initiation factor IF-3 [Synechococcus sp. CC9311]
Length = 212
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/128 (43%), Positives = 81/128 (63%), Gaps = 8/128 (6%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+++EQ+KK K +KKS ++ ++KE+KM Y IDQHDY VR+ A++FLK GDKVK V
Sbjct: 75 GKFKFEQEKKAKEAKKKS--HQTEVKEVKMRYKIDQHDYDVRIGQAQRFLKAGDKVKCTV 132
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNKALLQKAQEPPK 127
+GRE + +A L+RR D+ E A + R+ RN+ + L P KA L K K
Sbjct: 133 IFRGREIQHTALAEVLLRRMAKDLEEPAEVQQPPKREGRNMIMFLTPRKAPLVK-----K 187
Query: 128 KKDKQVVD 135
KD++VV+
Sbjct: 188 DKDEEVVN 195
>gi|307153320|ref|YP_003888704.1| translation initiation factor IF-3 [Cyanothece sp. PCC 7822]
gi|306983548|gb|ADN15429.1| translation initiation factor IF-3 [Cyanothece sp. PCC 7822]
Length = 177
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 72/109 (66%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY++EQ+KK + + K + D+KE+KM Y ID HDY+VR+ A++FLK GDKVK +
Sbjct: 71 GKYKFEQEKKAR--EAKKKQHTADVKEVKMRYKIDDHDYNVRVNQAQRFLKSGDKVKATI 128
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + N+A EL++R ND+ E+A + ++ RN+ ++L P K
Sbjct: 129 TFRGREIQHANLAEELLQRMANDLQEIAEVQQAPKKEGRNMMMLLSPKK 177
>gi|17988293|ref|NP_540927.1| translation initiation factor IF-3 [Brucella melitensis bv. 1 str.
16M]
gi|23502965|ref|NP_699092.1| translation initiation factor IF-3 [Brucella suis 1330]
gi|82700868|ref|YP_415442.1| translation initiation factor IF-3 [Brucella melitensis biovar
Abortus 2308]
gi|148559884|ref|YP_001259916.1| translation initiation factor IF-3 [Brucella ovis ATCC 25840]
gi|161620028|ref|YP_001593915.1| translation initiation factor IF-3 [Brucella canis ATCC 23365]
gi|163844133|ref|YP_001628537.1| translation initiation factor IF-3 [Brucella suis ATCC 23445]
gi|225626490|ref|ZP_03784529.1| Translation initiation factor IF-3 [Brucella ceti str. Cudo]
gi|225853544|ref|YP_002733777.1| translation initiation factor IF-3 [Brucella melitensis ATCC 23457]
gi|237816462|ref|ZP_04595455.1| Translation initiation factor IF-3 [Brucella abortus str. 2308 A]
gi|256370515|ref|YP_003108026.1| translation initiation factor IF-3 [Brucella microti CCM 4915]
gi|340791699|ref|YP_004757164.1| translation initiation factor IF-3 [Brucella pinnipedialis B2/94]
gi|376281760|ref|YP_005155766.1| translation initiation factor IF-3 [Brucella suis VBI22]
gi|384212469|ref|YP_005601553.1| translation initiation factor IF-3 [Brucella melitensis M5-90]
gi|384225752|ref|YP_005616916.1| translation initiation factor IF-3 [Brucella suis 1330]
gi|384446104|ref|YP_005604823.1| translation initiation factor IF-3 [Brucella melitensis NI]
gi|17984064|gb|AAL53191.1| bacterial protein translation initiation factor 3 ( if-3) [Brucella
melitensis bv. 1 str. 16M]
gi|23349002|gb|AAN31007.1| translation initiation factor IF-3 [Brucella suis 1330]
gi|82616969|emb|CAJ12077.1| Initiation factor 3 [Brucella melitensis biovar Abortus 2308]
gi|148371141|gb|ABQ61120.1| translation initiation factor IF-3 [Brucella ovis ATCC 25840]
gi|161336839|gb|ABX63144.1| Translation initiation factor IF-3 [Brucella canis ATCC 23365]
gi|163674856|gb|ABY38967.1| Translation initiation factor IF-3 [Brucella suis ATCC 23445]
gi|225618147|gb|EEH15190.1| Translation initiation factor IF-3 [Brucella ceti str. Cudo]
gi|225641909|gb|ACO01823.1| Translation initiation factor IF-3 [Brucella melitensis ATCC 23457]
gi|237788529|gb|EEP62744.1| Translation initiation factor IF-3 [Brucella abortus str. 2308 A]
gi|256000678|gb|ACU49077.1| translation initiation factor IF-3 [Brucella microti CCM 4915]
gi|326539834|gb|ADZ88049.1| translation initiation factor IF-3 [Brucella melitensis M5-90]
gi|340560158|gb|AEK55396.1| translation initiation factor IF-3 [Brucella pinnipedialis B2/94]
gi|343383932|gb|AEM19424.1| translation initiation factor IF-3 [Brucella suis 1330]
gi|349744093|gb|AEQ09636.1| translation initiation factor IF-3 [Brucella melitensis NI]
gi|358259359|gb|AEU07094.1| translation initiation factor IF-3 [Brucella suis VBI22]
Length = 134
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 67/108 (62%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y+ QKK +KK +++KE+KM NID HDY V++KAA++F ++GDKVKV
Sbjct: 28 LGKLKYQNQKKAAEARKKQ--KTVEIKEIKMRPNIDTHDYEVKMKAAQRFFEEGDKVKVT 85
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE + + ++L++R + D E+A E R + ++L P
Sbjct: 86 LRFRGREMAHQELGMKLLQRVKEDTVEIAKVESEPKLEGRQMMMVLAP 133
>gi|319403531|emb|CBI77112.1| translation initiation factor IF-3 [Bartonella rochalimae ATCC
BAA-1498]
Length = 164
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 68/108 (62%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y+ QKK +KK +++KE+KM N+D HDY V+LKA R+F+ +GDKVK+
Sbjct: 58 LGKLKYQNQKKAAETRKKQKI--IEIKEIKMRPNVDIHDYEVKLKAIRRFIDNGDKVKIT 115
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE +++ I+L++R + + E+A E F R I +++ P
Sbjct: 116 LRFRGREMAHQDLGIKLLQRVKENTSEIAKIESEPKFEGRQIMMVIAP 163
>gi|88809920|ref|ZP_01125425.1| translation initiation factor IF-3 [Synechococcus sp. WH 7805]
gi|88786110|gb|EAR17272.1| translation initiation factor IF-3 [Synechococcus sp. WH 7805]
Length = 220
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY++EQ+KK K +KKS ++ ++KE+KM Y IDQHDY VR+ A++FLK GDKVK V
Sbjct: 75 GKYKFEQEKKAKEAKKKS--HQTEVKEVKMRYKIDQHDYDVRIGQAQRFLKAGDKVKCTV 132
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNKALLQK 121
+GRE + +A L+RR D+ E A + R+ RN+ + L P K L K
Sbjct: 133 IFRGREIQHTALAETLLRRMAKDLEEPAEIQQPPKREGRNMIMFLTPRKTPLAK 186
>gi|319406445|emb|CBI80085.1| translation initiation factor IF-3 [Bartonella sp. 1-1C]
Length = 164
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 68/108 (62%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y+ QKK +KK +++KE+KM N+D HDY V+LKA R+F+ +GDKVK+
Sbjct: 58 LGKLKYQNQKKAAETRKKQKI--IEIKEIKMRPNVDIHDYEVKLKAIRRFIDNGDKVKIT 115
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE +++ I+L++R + + E+A E F R I +++ P
Sbjct: 116 LRFRGREMAHQDLGIKLLQRVKENTSEIAKIESEPKFEGRQIMMVIAP 163
>gi|11465697|ref|NP_053841.1| translation initiation factor 3 [Porphyra purpurea]
gi|1708415|sp|P51231.1|IF3C_PORPU RecName: Full=Translation initiation factor IF-3, chloroplastic
gi|1276697|gb|AAC08117.1| initiation factor 3 (chloroplast) [Porphyra purpurea]
Length = 182
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 67/108 (62%), Gaps = 3/108 (2%)
Query: 10 KYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVN 69
KY++ Q+K+ + +KK + +KE+KM Y I++HDY VR+ A KFL+ GDKVK +
Sbjct: 75 KYKFTQEKRAREAKKKQ--HNSSIKEVKMRYKIEEHDYKVRINQASKFLQSGDKVKATIT 132
Query: 70 LKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + N+AI L+ + D+ +A + RD RN+ ++L P K
Sbjct: 133 FRGREIQHSNLAINLLNKMAADLVTIAEIQQAPSRDGRNVIMLLSPKK 180
>gi|119487595|ref|ZP_01621205.1| translation initiation factor IF-3 [Lyngbya sp. PCC 8106]
gi|119455764|gb|EAW36900.1| translation initiation factor IF-3 [Lyngbya sp. PCC 8106]
Length = 178
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 67/109 (61%), Gaps = 4/109 (3%)
Query: 10 KYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVN 69
KY+Y+Q K K+ ++ S + LKELKM Y I+ HDYSVR+ A++FLK G+ VK V
Sbjct: 73 KYKYQQLKSKENNRQSSKSQ---LKELKMRYKIEDHDYSVRVNHAKRFLKSGNPVKATVT 129
Query: 70 LKGRENEFRNIAIELIRRFQNDVGELASEENKNFRDRN-IFIILVPNKA 117
++GREN +A +L+ R D+ E A + R+ + I ++L P KA
Sbjct: 130 MRGRENLHGGLAKDLLDRMATDLEEFAQIQQSPKREGSRITMLLTPRKA 178
>gi|22299163|ref|NP_682410.1| translation initiation factor IF-3 [Thermosynechococcus elongatus
BP-1]
gi|29427442|sp|Q8DIG8.1|IF3_THEEB RecName: Full=Translation initiation factor IF-3
gi|22295345|dbj|BAC09172.1| translation initiation factor IF-3 [Thermosynechococcus elongatus
BP-1]
Length = 182
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+EQ+KK + +KK + D+KE+KM Y I++HDY+V + A +FLK GDKVK V
Sbjct: 76 GKFRFEQEKKAREARKKQHTS--DVKEVKMRYKIEEHDYNVCINRAERFLKAGDKVKATV 133
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNK 116
+GRE + ++A EL+ R ND+ +A ++ RN+ + L P +
Sbjct: 134 TFRGREIQHSHLAEELLNRMANDLQAVAEVQQAPKQEGRNMIMFLAPKR 182
>gi|113474737|ref|YP_720798.1| translation initiation factor 3 [Trichodesmium erythraeum IMS101]
gi|110165785|gb|ABG50325.1| bacterial translation initiation factor 3 (bIF-3) [Trichodesmium
erythraeum IMS101]
Length = 178
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 70/110 (63%), Gaps = 3/110 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY +EQ KKK Q K + ++KE+KM Y I++HDY+VRL A++FL+ GDKVK +
Sbjct: 70 GKYLFEQ--KKKVQDAKRKQHNAEVKEVKMRYKIEEHDYNVRLSHAKRFLESGDKVKATI 127
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKA 117
+GRE + N+A EL++R D+ +LA ++ R++ ++L P K+
Sbjct: 128 MFRGREIQHSNLAEELLQRMATDLKDLAEIQQAPKKEGRSMMMLLSPKKS 177
>gi|239833158|ref|ZP_04681487.1| Translation initiation factor IF-3 [Ochrobactrum intermedium LMG
3301]
gi|376272163|ref|YP_005150741.1| translation initiation factor IF-3 [Brucella abortus A13334]
gi|376275295|ref|YP_005115734.1| translation initiation factor IF-3 [Brucella canis HSK A52141]
gi|384409569|ref|YP_005598190.1| translation initiation factor IF-3 [Brucella melitensis M28]
gi|423167919|ref|ZP_17154622.1| translation initiation factor IF-3 [Brucella abortus bv. 1 str.
NI435a]
gi|423169705|ref|ZP_17156380.1| translation initiation factor IF-3 [Brucella abortus bv. 1 str.
NI474]
gi|423175305|ref|ZP_17161974.1| translation initiation factor IF-3 [Brucella abortus bv. 1 str.
NI486]
gi|423177845|ref|ZP_17164490.1| translation initiation factor IF-3 [Brucella abortus bv. 1 str.
NI488]
gi|423179138|ref|ZP_17165779.1| translation initiation factor IF-3 [Brucella abortus bv. 1 str.
NI010]
gi|423182269|ref|ZP_17168906.1| translation initiation factor IF-3 [Brucella abortus bv. 1 str.
NI016]
gi|423186789|ref|ZP_17173403.1| translation initiation factor IF-3 [Brucella abortus bv. 1 str.
NI021]
gi|423190775|ref|ZP_17177383.1| translation initiation factor IF-3 [Brucella abortus bv. 1 str.
NI259]
gi|444313021|ref|ZP_21148583.1| translation initiation factor IF-3 [Ochrobactrum intermedium M86]
gi|239825425|gb|EEQ96993.1| Translation initiation factor IF-3 [Ochrobactrum intermedium LMG
3301]
gi|326410116|gb|ADZ67181.1| translation initiation factor IF-3 [Brucella melitensis M28]
gi|363399769|gb|AEW16739.1| translation initiation factor IF-3 [Brucella abortus A13334]
gi|363403862|gb|AEW14157.1| translation initiation factor IF-3 [Brucella canis HSK A52141]
gi|374535749|gb|EHR07270.1| translation initiation factor IF-3 [Brucella abortus bv. 1 str.
NI486]
gi|374539668|gb|EHR11171.1| translation initiation factor IF-3 [Brucella abortus bv. 1 str.
NI435a]
gi|374543384|gb|EHR14867.1| translation initiation factor IF-3 [Brucella abortus bv. 1 str.
NI474]
gi|374549047|gb|EHR20493.1| translation initiation factor IF-3 [Brucella abortus bv. 1 str.
NI488]
gi|374552082|gb|EHR23511.1| translation initiation factor IF-3 [Brucella abortus bv. 1 str.
NI016]
gi|374552454|gb|EHR23882.1| translation initiation factor IF-3 [Brucella abortus bv. 1 str.
NI010]
gi|374554545|gb|EHR25956.1| translation initiation factor IF-3 [Brucella abortus bv. 1 str.
NI259]
gi|374557501|gb|EHR28897.1| translation initiation factor IF-3 [Brucella abortus bv. 1 str.
NI021]
gi|443483623|gb|ELT46463.1| translation initiation factor IF-3 [Ochrobactrum intermedium M86]
Length = 132
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 67/108 (62%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y+ QKK +KK +++KE+KM NID HDY V++KAA++F ++GDKVKV
Sbjct: 26 LGKLKYQNQKKAAEARKKQKT--VEIKEIKMRPNIDTHDYEVKMKAAQRFFEEGDKVKVT 83
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE + + ++L++R + D E+A E R + ++L P
Sbjct: 84 LRFRGREMAHQELGMKLLQRVKEDTVEIAKVESEPKLEGRQMMMVLAP 131
>gi|148238481|ref|YP_001223868.1| translation initiation factor IF-3 [Synechococcus sp. WH 7803]
gi|166233785|sp|A5GI06.1|IF3_SYNPW RecName: Full=Translation initiation factor IF-3
gi|147847020|emb|CAK22571.1| Translation initiation factor IF-3 [Synechococcus sp. WH 7803]
Length = 220
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY++EQ+KK K +KKS ++ ++KE+KM Y IDQHDY VR+ A++FLK GDKVK V
Sbjct: 75 GKYKFEQEKKAKEAKKKS--HQTEVKEVKMRYKIDQHDYDVRIGQAQRFLKAGDKVKCTV 132
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNKALLQK 121
+GRE + +A L+RR D+ E A + R+ RN+ + L P K L K
Sbjct: 133 IFRGREIQHTALAETLLRRMAKDLEEPAEIQQPPKREGRNMIMFLTPRKTPLVK 186
>gi|407772487|ref|ZP_11119789.1| translation initiation factor IF-3 [Thalassospira profundimaris
WP0211]
gi|407284440|gb|EKF09956.1| translation initiation factor IF-3 [Thalassospira profundimaris
WP0211]
Length = 171
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 69/107 (64%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YEQ KK+ +KK +++KE+K+ NID HDY+V+L+AA+KFL GDKVKV +
Sbjct: 66 GKFKYEQSKKQNEAKKKQKV--IEVKEIKLRPNIDIHDYNVKLRAAQKFLGGGDKVKVTL 123
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEE-NKNFRDRNIFIILVP 114
+GRE +++ + +++RF D+ +LA E R + ++L P
Sbjct: 124 RFRGREMAHQDLGLGMLQRFSGDLEDLAKPEMMPKMEGRVMIMVLAP 170
>gi|78042833|ref|YP_360407.1| translation initiation factor IF-3 [Carboxydothermus
hydrogenoformans Z-2901]
gi|77994948|gb|ABB13847.1| translation initiation factor IF-3 [Carboxydothermus
hydrogenoformans Z-2901]
Length = 169
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYRY+Q KK+K +KK +++KE+K+ I++HD+ V+L+ +FL+DGDKVKV V
Sbjct: 63 GKYRYQQSKKEKEARKKQKI--INVKEIKIRPTIEEHDFQVKLRNVLRFLEDGDKVKVTV 120
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILVP 114
+GRE IA EL+ + +VG +A E RN+ +IL P
Sbjct: 121 MFRGRELSHPEIAYELLNKMAQEVGSIAVVERPAKLEGRNMIMILAP 167
>gi|306818550|ref|ZP_07452273.1| translation initiation factor IF3 [Mobiluncus mulieris ATCC 35239]
gi|304648723|gb|EFM46025.1| translation initiation factor IF3 [Mobiluncus mulieris ATCC 35239]
Length = 362
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YE +K + ++ A+ + LKE+++G IDQHDY V+L R+FL GDKVKV++
Sbjct: 77 GKYKYEAAQKARDAKRNQASTQ--LKEIRLGLKIDQHDYEVKLGHMRRFLDGGDKVKVMI 134
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + ++L+ R D+ E E+ +D RN+ ++L P K
Sbjct: 135 RFRGREQSRPEMGVKLMNRLAEDIAEDGIVESTPRQDGRNMTMVLAPVK 183
>gi|306842770|ref|ZP_07475412.1| translation initiation factor IF-3 [Brucella sp. BO2]
gi|306287114|gb|EFM58619.1| translation initiation factor IF-3 [Brucella sp. BO2]
Length = 109
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 67/108 (62%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y+ QKK +KK +++KE+KM NID HDY V++KAA++F ++GDKVKV
Sbjct: 3 LGKLKYQNQKKAAEARKKQKT--VEIKEIKMRPNIDTHDYEVKMKAAQRFFEEGDKVKVT 60
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE + + ++L++R + D E+A E R + ++L P
Sbjct: 61 LRFRGREMAHQELGMKLLQRVKEDTVEIAKVESEPKLEGRQMMMVLAP 108
>gi|269978175|ref|ZP_06185125.1| translation initiation factor IF-3 [Mobiluncus mulieris 28-1]
gi|307700704|ref|ZP_07637729.1| translation initiation factor IF-3 [Mobiluncus mulieris FB024-16]
gi|269933684|gb|EEZ90268.1| translation initiation factor IF-3 [Mobiluncus mulieris 28-1]
gi|307613699|gb|EFN92943.1| translation initiation factor IF-3 [Mobiluncus mulieris FB024-16]
Length = 362
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YE +K + ++ A+ + LKE+++G IDQHDY V+L R+FL GDKVKV++
Sbjct: 77 GKYKYEAAQKARDAKRNQASTQ--LKEIRLGLKIDQHDYEVKLGHMRRFLDGGDKVKVMI 134
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + ++L+ R D+ E E+ +D RN+ ++L P K
Sbjct: 135 RFRGREQSRPEMGVKLMNRLAEDIAEDGIVESTPRQDGRNMTMVLAPVK 183
>gi|62290957|ref|YP_222750.1| translation initiation factor IF-3 [Brucella abortus bv. 1 str.
9-941]
gi|61226333|sp|P0A3K8.1|IF3_BRUME RecName: Full=Translation initiation factor IF-3
gi|61226334|sp|P0A3K9.1|IF3_BRUSU RecName: Full=Translation initiation factor IF-3
gi|61226336|sp|P0A3L0.1|IF3_BRUAB RecName: Full=Translation initiation factor IF-3
gi|7105706|gb|AAF05835.2|AF196569_1 translation initiation factor 3 [Brucella abortus]
gi|62197089|gb|AAX75389.1| InfC, translation initiation factor IF-3 [Brucella abortus bv. 1
str. 9-941]
Length = 178
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 67/108 (62%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y+ QKK +KK +++KE+KM NID HDY V++KAA++F ++GDKVKV
Sbjct: 72 LGKLKYQNQKKAAEARKKQKT--VEIKEIKMRPNIDTHDYEVKMKAAQRFFEEGDKVKVT 129
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE + + ++L++R + D E+A E R + ++L P
Sbjct: 130 LRFRGREMAHQELGMKLLQRVKEDTVEIAKVESEPKLEGRQMMMVLAP 177
>gi|443317168|ref|ZP_21046587.1| translation initiation factor IF-3 [Leptolyngbya sp. PCC 6406]
gi|442783243|gb|ELR93164.1| translation initiation factor IF-3 [Leptolyngbya sp. PCC 6406]
Length = 174
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 72/109 (66%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY++EQ+K+ + +K+ + ++KE+KM Y ID HDY+VR+K A++FL+ GDKVK +
Sbjct: 68 GKYKFEQEKRAREARKRQ--HNAEVKEVKMRYKIDDHDYNVRVKNAQRFLQSGDKVKATI 125
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + ++A +L+RR D+ +A + R+ RN+ ++L P K
Sbjct: 126 MFRGREIQHSDLAEQLLRRMAKDLDAVAEMQQAPKREGRNMMMMLSPKK 174
>gi|427392249|ref|ZP_18886254.1| translation initiation factor IF-3 [Alloiococcus otitis ATCC 51267]
gi|425731516|gb|EKU94332.1| translation initiation factor IF-3 [Alloiococcus otitis ATCC 51267]
Length = 183
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 70/108 (64%), Gaps = 4/108 (3%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFL-KDGDKVKVI 67
KYRYEQQKK++ Q+K +D+KE+++ ID HD++ +LK RKFL KDGDKVKV
Sbjct: 74 GKYRYEQQKKEREQRKNQKT--VDVKEIRLSPTIDDHDFNTKLKQGRKFLDKDGDKVKVS 131
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
+ +GR ++I E++ RF + ++ E+K D R++F+++ P
Sbjct: 132 IRFRGRAITHKDIGREVLERFAEETKDVGDIESKAKMDGRSMFMMIAP 179
>gi|227875288|ref|ZP_03993430.1| translation initiation factor IF-3 [Mobiluncus mulieris ATCC 35243]
gi|227844193|gb|EEJ54360.1| translation initiation factor IF-3 [Mobiluncus mulieris ATCC 35243]
Length = 356
Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YE +K + ++ A+ + LKE+++G IDQHDY V+L R+FL GDKVKV++
Sbjct: 71 GKYKYEAAQKARDAKRNQASTQ--LKEIRLGLKIDQHDYEVKLGHMRRFLDGGDKVKVMI 128
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + ++L+ R D+ E E+ +D RN+ ++L P K
Sbjct: 129 RFRGREQSRPEMGVKLMNRLAEDIAEDGIVESTPRQDGRNMTMVLAPVK 177
>gi|291279884|ref|YP_003496719.1| translation initiation factor IF-3 [Deferribacter desulfuricans
SSM1]
gi|290754586|dbj|BAI80963.1| translation initiation factor IF-3 [Deferribacter desulfuricans
SSM1]
Length = 155
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 70/107 (65%), Gaps = 1/107 (0%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY++E+ KK++ +KK +++D+KE+K ID+HDY V+LK ++FL+DGDKVKV++
Sbjct: 46 GKYKFEKNKKEREARKKLRQHQIDVKEMKFRPKIDEHDYQVKLKHVKRFLEDGDKVKVVM 105
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILVP 114
+GRE F+ +E++ R D+ +L E++ + R ++L P
Sbjct: 106 RYRGREMAFQEQGLEVLNRIVRDLEDLCVVEKHPEMQGRQQVMVLAP 152
>gi|260546221|ref|ZP_05821961.1| translation initiation factor IF-3 [Brucella abortus NCTC 8038]
gi|260563021|ref|ZP_05833507.1| translation initiation factor IF-3 [Brucella melitensis bv. 1 str.
16M]
gi|260567412|ref|ZP_05837882.1| translation initiation factor IF-3 [Brucella suis bv. 4 str. 40]
gi|260755791|ref|ZP_05868139.1| translation initiation factor IF-3 [Brucella abortus bv. 6 str.
870]
gi|260759014|ref|ZP_05871362.1| translation initiation factor IF-3 [Brucella abortus bv. 4 str.
292]
gi|260760739|ref|ZP_05873082.1| translation initiation factor IF-3 [Brucella abortus bv. 2 str.
86/8/59]
gi|260884815|ref|ZP_05896429.1| translation initiation factor IF-3 [Brucella abortus bv. 9 str.
C68]
gi|261215066|ref|ZP_05929347.1| translation initiation factor IF-3 [Brucella abortus bv. 3 str.
Tulya]
gi|261217936|ref|ZP_05932217.1| translation initiation factor IF-3 [Brucella ceti M13/05/1]
gi|261221165|ref|ZP_05935446.1| translation initiation factor IF-3 [Brucella ceti B1/94]
gi|261314848|ref|ZP_05954045.1| translation initiation factor IF-3 [Brucella pinnipedialis
M163/99/10]
gi|261316593|ref|ZP_05955790.1| translation initiation factor IF-3 [Brucella pinnipedialis B2/94]
gi|261321214|ref|ZP_05960411.1| translation initiation factor IF-3 [Brucella ceti M644/93/1]
gi|261324056|ref|ZP_05963253.1| translation initiation factor IF-3 [Brucella neotomae 5K33]
gi|261751258|ref|ZP_05994967.1| translation initiation factor IF-3 [Brucella suis bv. 5 str. 513]
gi|261755823|ref|ZP_05999532.1| translation initiation factor IF-3 [Brucella suis bv. 3 str. 686]
gi|261759051|ref|ZP_06002760.1| translation initiation factor IF-3 [Brucella sp. F5/99]
gi|265983114|ref|ZP_06095849.1| translation initiation factor IF-3 [Brucella sp. 83/13]
gi|265992140|ref|ZP_06104697.1| translation initiation factor IF-3 [Brucella melitensis bv. 1 str.
Rev.1]
gi|265993878|ref|ZP_06106435.1| translation initiation factor IF-3 [Brucella melitensis bv. 3 str.
Ether]
gi|265997125|ref|ZP_06109682.1| translation initiation factor IF-3 [Brucella ceti M490/95/1]
gi|265999247|ref|ZP_06111613.1| translation initiation factor IF-3 [Brucella melitensis bv. 2 str.
63/9]
gi|294851343|ref|ZP_06792016.1| translation initiation factor IF-3 [Brucella sp. NVSL 07-0026]
gi|297247343|ref|ZP_06931061.1| translation initiation factor IF-3 [Brucella abortus bv. 5 str.
B3196]
gi|260096328|gb|EEW80204.1| translation initiation factor IF-3 [Brucella abortus NCTC 8038]
gi|260153037|gb|EEW88129.1| translation initiation factor IF-3 [Brucella melitensis bv. 1 str.
16M]
gi|260156930|gb|EEW92010.1| translation initiation factor IF-3 [Brucella suis bv. 4 str. 40]
gi|260669332|gb|EEX56272.1| translation initiation factor IF-3 [Brucella abortus bv. 4 str.
292]
gi|260671171|gb|EEX57992.1| translation initiation factor IF-3 [Brucella abortus bv. 2 str.
86/8/59]
gi|260675899|gb|EEX62720.1| translation initiation factor IF-3 [Brucella abortus bv. 6 str.
870]
gi|260874343|gb|EEX81412.1| translation initiation factor IF-3 [Brucella abortus bv. 9 str.
C68]
gi|260916673|gb|EEX83534.1| translation initiation factor IF-3 [Brucella abortus bv. 3 str.
Tulya]
gi|260919749|gb|EEX86402.1| translation initiation factor IF-3 [Brucella ceti B1/94]
gi|260923025|gb|EEX89593.1| translation initiation factor IF-3 [Brucella ceti M13/05/1]
gi|261293904|gb|EEX97400.1| translation initiation factor IF-3 [Brucella ceti M644/93/1]
gi|261295816|gb|EEX99312.1| translation initiation factor IF-3 [Brucella pinnipedialis B2/94]
gi|261300036|gb|EEY03533.1| translation initiation factor IF-3 [Brucella neotomae 5K33]
gi|261303874|gb|EEY07371.1| translation initiation factor IF-3 [Brucella pinnipedialis
M163/99/10]
gi|261739035|gb|EEY27031.1| translation initiation factor IF-3 [Brucella sp. F5/99]
gi|261741011|gb|EEY28937.1| translation initiation factor IF-3 [Brucella suis bv. 5 str. 513]
gi|261745576|gb|EEY33502.1| translation initiation factor IF-3 [Brucella suis bv. 3 str. 686]
gi|262551593|gb|EEZ07583.1| translation initiation factor IF-3 [Brucella ceti M490/95/1]
gi|262764859|gb|EEZ10780.1| translation initiation factor IF-3 [Brucella melitensis bv. 3 str.
Ether]
gi|263003206|gb|EEZ15499.1| translation initiation factor IF-3 [Brucella melitensis bv. 1 str.
Rev.1]
gi|263092845|gb|EEZ17020.1| translation initiation factor IF-3 [Brucella melitensis bv. 2 str.
63/9]
gi|264661706|gb|EEZ31967.1| translation initiation factor IF-3 [Brucella sp. 83/13]
gi|294819932|gb|EFG36931.1| translation initiation factor IF-3 [Brucella sp. NVSL 07-0026]
gi|297174512|gb|EFH33859.1| translation initiation factor IF-3 [Brucella abortus bv. 5 str.
B3196]
Length = 196
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 67/108 (62%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y+ QKK +KK +++KE+KM NID HDY V++KAA++F ++GDKVKV
Sbjct: 90 LGKLKYQNQKKAAEARKKQKT--VEIKEIKMRPNIDTHDYEVKMKAAQRFFEEGDKVKVT 147
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE + + ++L++R + D E+A E R + ++L P
Sbjct: 148 LRFRGREMAHQELGMKLLQRVKEDTVEIAKVESEPKLEGRQMMMVLAP 195
>gi|110770771|ref|XP_001123266.1| PREDICTED: translation initiation factor IF-3-like, partial [Apis
mellifera]
Length = 283
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 70/106 (66%), Gaps = 3/106 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YEQQKKK +KK +D+KE+K+ NID++DY V+L AA++F+ GDKVK+ +
Sbjct: 178 GKFKYEQQKKKNEARKKQKV--IDIKEIKVRPNIDENDYQVKLNAAKRFIAGGDKVKITL 235
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILV 113
+GRE + + ++L+ R + D+ E+A E+ +R + ++LV
Sbjct: 236 RFRGREMAHQELGVQLLDRLRVDMEEVAKPEQTSKIENRQMIMVLV 281
>gi|313896162|ref|ZP_07829715.1| translation initiation factor IF-3 [Selenomonas sp. oral taxon 137
str. F0430]
gi|312974961|gb|EFR40423.1| translation initiation factor IF-3 [Selenomonas sp. oral taxon 137
str. F0430]
Length = 188
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 76/124 (61%), Gaps = 3/124 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+RYEQQK++K +KK + +KE+K+ NID+HD++V+LK A +F+++G+KVKV +
Sbjct: 59 GKFRYEQQKREKEAKKKQKT--ISIKEVKLRPNIDEHDFNVKLKNALRFVEEGNKVKVTI 116
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKALLQKAQEPPK 127
+GRE + ++ R +G+L S E +N+ +IL P KA +P K
Sbjct: 117 MFRGRELSHPELGRVVLDRVSERMGDLVSIERGAKLEGKNMTMILSPKAQKPAKASKPAK 176
Query: 128 KKDK 131
++DK
Sbjct: 177 QEDK 180
>gi|87123250|ref|ZP_01079101.1| translation initiation factor [Synechococcus sp. RS9917]
gi|86168970|gb|EAQ70226.1| translation initiation factor [Synechococcus sp. RS9917]
Length = 220
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 71/114 (62%), Gaps = 3/114 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY++EQ+KK K +KKS ++ ++KE+KM Y IDQHDY VR+ A +FLK GDKVK V
Sbjct: 75 GKYKFEQEKKAKEAKKKS--HQTEVKEVKMRYKIDQHDYDVRIGQATRFLKAGDKVKCTV 132
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNKALLQK 121
+GRE + +A L+RR D+ E A + R+ RN+ + L P K L K
Sbjct: 133 IFRGREIQHTALAETLLRRMAKDLEEQAEIQQAPKREGRNMIMFLTPRKTPLAK 186
>gi|354593534|ref|ZP_09011577.1| translation initiation factor IF-3 [Commensalibacter intestini
A911]
gi|353672645|gb|EHD14341.1| translation initiation factor IF-3 [Commensalibacter intestini
A911]
Length = 144
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 68/107 (63%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YEQQKKK +KK +++KELK+ NID +DY V+L AA++FL GDKVK+ +
Sbjct: 39 GKFKYEQQKKKNEARKKQKV--IEIKELKVRPNIDANDYQVKLNAAKRFLASGDKVKLTL 96
Query: 69 NLKGRENEFRNIAIELIRRFQNDV-GELASEENKNFRDRNIFIILVP 114
+GRE + + ++L+ RF+ D+ E E+ +R + ++L P
Sbjct: 97 RFRGREMAHQELGVQLLERFRLDLEAETKVEQMPKLENRQMVMVLAP 143
>gi|265987665|ref|ZP_06100222.1| translation initiation factor IF-3 [Brucella pinnipedialis
M292/94/1]
gi|264659862|gb|EEZ30123.1| translation initiation factor IF-3 [Brucella pinnipedialis
M292/94/1]
Length = 196
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 67/108 (62%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y+ QKK +KK +++KE+KM NID HDY V++KAA++F ++GDKVKV
Sbjct: 90 LGKLKYQNQKKAAEARKKQRT--VEIKEIKMRPNIDTHDYEVKMKAAQRFFEEGDKVKVT 147
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE + + ++L++R + D E+A E R + ++L P
Sbjct: 148 LRFRGREMAHQELGMKLLQRVKEDTVEIAKVESEPKLEGRQMMMVLAP 195
>gi|126697165|ref|YP_001092051.1| translation initiation factor IF-3 [Prochlorococcus marinus str.
MIT 9301]
gi|166198962|sp|A3PFC5.1|IF3_PROM0 RecName: Full=Translation initiation factor IF-3
gi|126544208|gb|ABO18450.1| Translation Initiation factor 3 [Prochlorococcus marinus str. MIT
9301]
Length = 190
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY++EQ+KK K +KKS ++ ++KE+KM Y ID+HDY VR+ A KFLK GDKVK V
Sbjct: 75 GKYKFEQEKKAKEARKKS--HQTEVKEVKMRYKIDKHDYDVRIGQATKFLKSGDKVKCTV 132
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNKALLQK 121
+GRE + N+A L+ R ND+ E + + K R+ RN+ + L P K L K
Sbjct: 133 IFRGREIQHSNLAETLLLRMANDLEEQSEVQQKPKREGRNMIMFLSPRKTPLIK 186
>gi|39933120|ref|NP_945396.1| translation initiation factor IF-3 [Rhodopseudomonas palustris
CGA009]
gi|192288474|ref|YP_001989079.1| translation initiation factor IF-3 [Rhodopseudomonas palustris
TIE-1]
gi|39652745|emb|CAE25484.1| translation initiation factor IF-3 [Rhodopseudomonas palustris
CGA009]
gi|192282223|gb|ACE98603.1| translation initiation factor IF-3 [Rhodopseudomonas palustris
TIE-1]
Length = 192
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 67/107 (62%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+Y QKK +KK +++KE+K+ ID HDY V++KA ++F ++GDKVK+ +
Sbjct: 87 GKYKYSAQKKAAEARKKQKI--VEIKEIKLRPMIDDHDYEVKMKAMQRFFEEGDKVKITL 144
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE + I +L+ + +NDV E+A E++ F R + ++L P
Sbjct: 145 RYRGREMAHQEIGTKLLEKVKNDVAEIAKVEQDPRFEGRQVVMVLAP 191
>gi|319898238|ref|YP_004158331.1| translation initiation factor IF-3 [Bartonella clarridgeiae 73]
gi|319402202|emb|CBI75733.1| translation initiation factor IF-3 [Bartonella clarridgeiae 73]
Length = 164
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 68/108 (62%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y+ QKK +KK +++KE+KM N+D HDY V+L+A R+F+ +GDKVK+
Sbjct: 58 LGKLKYQNQKKAAETRKKQKI--IEIKEIKMRPNVDVHDYEVKLRAIRRFIDNGDKVKIT 115
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE +++ I+L++R + + E+A E F R I +++ P
Sbjct: 116 LRFRGREMTHQDLGIKLLQRVKENTNEIAKIESEPKFEGRQIMMVIAP 163
>gi|341613710|ref|ZP_08700579.1| translation initiation factor IF-3 [Citromicrobium sp. JLT1363]
Length = 128
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 66/111 (59%), Gaps = 3/111 (2%)
Query: 5 YFFLSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKV 64
+ + K+RYE QKK +K D+KE+KM NID HDY V+++ KF+++GDKV
Sbjct: 19 FLDVGKHRYEAQKKANLARKTQKTQ--DIKEVKMRPNIDTHDYDVKMRNVNKFIENGDKV 76
Query: 65 KVIVNLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVP 114
KV + +GRE + I ++L+ R ++DV E+A E R + ++L P
Sbjct: 77 KVTLRFRGREMAHQQIGMDLLNRVRDDVEEIAKVEAFPRLEGRQMLMVLAP 127
>gi|404316744|ref|ZP_10964677.1| translation initiation factor IF-3 [Ochrobactrum anthropi CTS-325]
Length = 132
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 66/108 (61%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y+ QKK +KK +++KE+KM NID HDY V++KAA +F ++GDKVKV
Sbjct: 26 LGKLKYQNQKKAAEARKKQKT--VEIKEIKMRPNIDTHDYEVKMKAALRFFEEGDKVKVT 83
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE + + ++L++R + D E+A E R + ++L P
Sbjct: 84 LRFRGREMAHQELGMKLLQRVKEDTVEIAKVESEPKLEGRQMMMVLAP 131
>gi|312898389|ref|ZP_07757779.1| translation initiation factor IF-3 [Megasphaera micronuciformis
F0359]
gi|310620308|gb|EFQ03878.1| translation initiation factor IF-3 [Megasphaera micronuciformis
F0359]
Length = 167
Score = 78.2 bits (191), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 71/110 (64%), Gaps = 3/110 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYRYEQQK++K +KK + LKE+K+ NI+ HD+ V++KAA++FL +G KVKV +
Sbjct: 59 GKYRYEQQKREKEAKKKQKV--LTLKEVKLRPNIEDHDFYVKMKAAQRFLDEGSKVKVTI 116
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKA 117
+GRE + +L+ RF +++ E+A E+ RN+ +++ NKA
Sbjct: 117 MFRGREMSHPELGEKLLIRFADELKEVAHVEKAPKIEGRNMTMVIAVNKA 166
>gi|434400546|ref|YP_007134550.1| bacterial translation initiation factor 3 (bIF-3) [Stanieria
cyanosphaera PCC 7437]
gi|428271643|gb|AFZ37584.1| bacterial translation initiation factor 3 (bIF-3) [Stanieria
cyanosphaera PCC 7437]
Length = 176
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 71/109 (65%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YEQ KK ++ K + D+KE+KM Y I++HDY+VR+K A +FLK GDKVK V
Sbjct: 70 GKYKYEQDKKL--KEAKKKQHNADVKEVKMRYKIEEHDYNVRVKNAERFLKSGDKVKATV 127
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+ +GRE + ++A EL++R D+ +A + R+ RN+ ++L P K
Sbjct: 128 SFRGREIQHADLAEELLKRMATDLESVAEVQQAPKREGRNMMMLLSPKK 176
>gi|78211640|ref|YP_380419.1| translation initiation factor IF-3 [Synechococcus sp. CC9605]
gi|123756979|sp|Q3ANG8.1|IF3_SYNSC RecName: Full=Translation initiation factor IF-3
gi|78196099|gb|ABB33864.1| translation initiation factor IF-3 [Synechococcus sp. CC9605]
Length = 217
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/117 (43%), Positives = 74/117 (63%), Gaps = 3/117 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+++EQ+KK K +KKS ++ ++KE+KM Y IDQHDY VR+ A++FLK GDKVK V
Sbjct: 75 GKFKFEQEKKAKEAKKKS--HQTEVKEVKMRYKIDQHDYDVRIGQAQRFLKAGDKVKCTV 132
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNKALLQKAQE 124
+GRE + +A L+RR D+ E A + R+ RN+ + L P K L K +E
Sbjct: 133 IFRGREIQHTALAETLLRRMAKDLEEKAEIQQAPKREGRNMIMFLTPRKTPLVKKEE 189
>gi|427712091|ref|YP_007060715.1| translation initiation factor 3 (bIF-3) [Synechococcus sp. PCC
6312]
gi|427376220|gb|AFY60172.1| bacterial translation initiation factor 3 (bIF-3) [Synechococcus
sp. PCC 6312]
Length = 194
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YEQ+KK + +KK + D+KE+KM Y I++HDY+VR+ A +FLK GDKVK V
Sbjct: 88 GKFKYEQEKKVREARKKQHTS--DVKEVKMRYKIEEHDYNVRVNQAERFLKSGDKVKATV 145
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNK 116
+GRE + ++A L++R D+ +A ++ RN+ + L P +
Sbjct: 146 TFRGREIQHSHLAEALLKRMAADLEAVAELQQAPKQEGRNMIMFLAPKR 194
>gi|384261310|ref|YP_005416496.1| Bacterial translation initiation factor 3 (BIF-3) [Rhodospirillum
photometricum DSM 122]
gi|378402410|emb|CCG07526.1| Bacterial translation initiation factor 3 (BIF-3) [Rhodospirillum
photometricum DSM 122]
Length = 173
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 73/108 (67%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K++YE QKKK +KK +++KE+K+ NID HDY V+++AARKFL++GDKVKV
Sbjct: 67 LGKFKYEAQKKKNEAKKKQKV--IEIKEIKIRPNIDDHDYDVKMRAARKFLEEGDKVKVT 124
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE ++I + +++R +DV E+A E++ R + +++ P
Sbjct: 125 LRFRGREMAHQDIGMGVLKRVSDDVAEMAKIEQHPKLEGRQMIMVMAP 172
>gi|428201985|ref|YP_007080574.1| translation initiation factor IF-3 [Pleurocapsa sp. PCC 7327]
gi|427979417|gb|AFY77017.1| translation initiation factor IF-3 [Pleurocapsa sp. PCC 7327]
Length = 176
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 69/109 (63%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY++EQ+KK + + K + D+KE+KM Y ID HDY VR+ A++FLK GDKVK +
Sbjct: 70 GKYKFEQEKKAR--EAKKKQHTADVKEVKMRYKIDDHDYHVRVNQAQRFLKSGDKVKATI 127
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
KGRE + ++A EL+ R D+ E+A + ++ RN+ ++L P K
Sbjct: 128 TFKGREIQHSHLAEELLNRLATDLQEVAEVQQAPKKEGRNMMMLLAPKK 176
>gi|172037491|ref|YP_001803992.1| translation initiation factor IF-3 [Cyanothece sp. ATCC 51142]
gi|354553628|ref|ZP_08972934.1| Translation initiation factor IF-3 [Cyanothece sp. ATCC 51472]
gi|171698945|gb|ACB51926.1| translation initiation factor IF-3 [Cyanothece sp. ATCC 51142]
gi|353554345|gb|EHC23735.1| Translation initiation factor IF-3 [Cyanothece sp. ATCC 51472]
Length = 179
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 69/108 (63%), Gaps = 3/108 (2%)
Query: 10 KYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVN 69
KY++EQ+KK + + K + D+KE+KM Y I +HDY VR+ A++FLK GDKVK +
Sbjct: 71 KYKFEQEKKAR--EAKKKQHTADVKEVKMRYKISEHDYQVRVNQAKRFLKSGDKVKATIT 128
Query: 70 LKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + N+A EL+ R D+ ELA + R+ RN+ +++ P K
Sbjct: 129 FRGREIQHSNLAQELLSRMAADLKELAEIQQAPKREGRNMMMLMSPKK 176
>gi|153008139|ref|YP_001369354.1| translation initiation factor IF-3 [Ochrobactrum anthropi ATCC
49188]
gi|166198960|sp|A6WX21.1|IF3_OCHA4 RecName: Full=Translation initiation factor IF-3
gi|151560027|gb|ABS13525.1| translation initiation factor IF-3 [Ochrobactrum anthropi ATCC
49188]
Length = 178
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 66/108 (61%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y+ QKK +KK +++KE+KM NID HDY V++KAA +F ++GDKVKV
Sbjct: 72 LGKLKYQNQKKAAEARKKQKT--VEIKEIKMRPNIDTHDYEVKMKAALRFFEEGDKVKVT 129
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE + + ++L++R + D E+A E R + ++L P
Sbjct: 130 LRFRGREMAHQELGMKLLQRVKEDTVEIAKVESEPKLEGRQMMMVLAP 177
>gi|83590593|ref|YP_430602.1| translation initiation factor 3 [Moorella thermoacetica ATCC 39073]
gi|83573507|gb|ABC20059.1| bacterial translation initiation factor 3 (bIF-3) [Moorella
thermoacetica ATCC 39073]
Length = 154
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 70/107 (65%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YEQ K+++ +KK +++KE+K+ NI++HD+ V+ + A +FL+DGDKVKV +
Sbjct: 48 GKYKYEQSKREREARKKQRI--INIKEVKLRLNIEEHDFQVKTRNAIRFLQDGDKVKVTI 105
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE ++ ++L +R + V +LAS E+ RN+ +IL P
Sbjct: 106 MFRGREIAHADLGLKLCQRVADQVADLASIEKPPKVEGRNMTMILAP 152
>gi|149185627|ref|ZP_01863943.1| translation initiation factor IF-3 [Erythrobacter sp. SD-21]
gi|148830847|gb|EDL49282.1| translation initiation factor IF-3 [Erythrobacter sp. SD-21]
Length = 140
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 66/111 (59%), Gaps = 3/111 (2%)
Query: 5 YFFLSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKV 64
+ + KYRYE QKK +K D+KE+KM NID HDY V+++ KF+++GDKV
Sbjct: 31 FLDVGKYRYEAQKKANLARKTQKTQ--DIKEVKMRPNIDDHDYDVKMRNVNKFIENGDKV 88
Query: 65 KVIVNLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVP 114
K + +GRE + + ++L+ R ++DV E+A E+ R + ++L P
Sbjct: 89 KCTLRFRGREMAHQQLGMDLLNRVRDDVEEIAKVESFPRLEGRQMVMVLAP 139
>gi|90420462|ref|ZP_01228369.1| translation initiation factor IF-3 [Aurantimonas manganoxydans
SI85-9A1]
gi|90335190|gb|EAS48943.1| translation initiation factor IF-3 [Aurantimonas manganoxydans
SI85-9A1]
Length = 189
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +YE QKK +++ +++KE+KM NID+HDY ++K+ R+F +GDKVKV
Sbjct: 82 LGKLKYETQKKSAEARRRQKT--IEVKEIKMRPNIDEHDYETKMKSVRRFFDEGDKVKVT 139
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE + + + L+ R + + GE+A E R + ++L P
Sbjct: 140 LRFRGREMAHQELGMRLLNRVREETGEIAKVEAEPKLEGRQMMMVLAP 187
>gi|126659540|ref|ZP_01730672.1| translation initiation factor IF-3 [Cyanothece sp. CCY0110]
gi|126619179|gb|EAZ89916.1| translation initiation factor IF-3 [Cyanothece sp. CCY0110]
Length = 195
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 69/108 (63%), Gaps = 3/108 (2%)
Query: 10 KYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVN 69
KY++EQ+KK + + K + D+KE+KM Y I +HDY VR+ A++FLK GDKVK +
Sbjct: 87 KYKFEQEKKAR--EAKKKQHTADVKEVKMRYKISEHDYQVRVNQAKRFLKSGDKVKATIT 144
Query: 70 LKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + N+A +L+ R D+ ELA + R+ RN+ +++ P K
Sbjct: 145 FRGREIQHSNLAQDLLSRMATDLQELAEIQQAPKREGRNMMMLMSPKK 192
>gi|427734818|ref|YP_007054362.1| translation initiation factor 3 (bIF-3) [Rivularia sp. PCC 7116]
gi|427369859|gb|AFY53815.1| bacterial translation initiation factor 3 (bIF-3) [Rivularia sp.
PCC 7116]
Length = 177
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 71/109 (65%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+++EQ+KK + +KK + D+KE+KM Y I+ HDY+VR+ A++FLKDGDKVK V
Sbjct: 71 GKFKFEQEKKAREARKKQ--HTADVKEVKMRYKIEDHDYNVRVNQAKRFLKDGDKVKATV 128
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + ++A L++R D+ +A + ++ RN+ ++L P K
Sbjct: 129 MFRGREIQHTDLAEILLKRMATDLEAVAEVQQYPKKEGRNMMMLLSPKK 177
>gi|365840175|ref|ZP_09381376.1| translation initiation factor IF-3 [Anaeroglobus geminatus F0357]
gi|364562230|gb|EHM40098.1| translation initiation factor IF-3 [Anaeroglobus geminatus F0357]
Length = 167
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 70/110 (63%), Gaps = 3/110 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYRYEQQK++K +KK LKE+K+ NI+ HD+ V++KAA++FL +G KVKV +
Sbjct: 59 GKYRYEQQKREKEAKKKQKV--FTLKEVKLRPNIEDHDFYVKMKAAQRFLDEGSKVKVTI 116
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKA 117
+GRE + +L+ RF +++ E+A E+ RN+ +++ NKA
Sbjct: 117 MFRGREMSHPELGEKLLVRFADELKEVAHVEKAPKIEGRNMTMVIAANKA 166
>gi|297617666|ref|YP_003702825.1| translation initiation factor IF-3 [Syntrophothermus lipocalidus
DSM 12680]
gi|297145503|gb|ADI02260.1| translation initiation factor IF-3 [Syntrophothermus lipocalidus
DSM 12680]
Length = 157
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+RYEQ K+ K +KK + +KE+KM ID HD+ V+ K AR+FL++GDKVKV +
Sbjct: 46 GKFRYEQSKRDKEARKKQKV--ITVKEVKMRPKIDHHDFLVKAKNARRFLQNGDKVKVTI 103
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE + EL RF ++ LAS E +N+ +IL P
Sbjct: 104 MFRGREISHAQLGQELCMRFAEELSSLASIEREPRVEGKNMIMILTP 150
>gi|352095356|ref|ZP_08956459.1| Translation initiation factor IF-3 [Synechococcus sp. WH 8016]
gi|351679367|gb|EHA62509.1| Translation initiation factor IF-3 [Synechococcus sp. WH 8016]
Length = 212
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+++EQ+KK K +KKS ++ ++KE+KM Y IDQHDY VR+ A++FLK GDKVK V
Sbjct: 75 GKFKFEQEKKAKEAKKKS--HQTEVKEVKMRYKIDQHDYDVRIGQAQRFLKAGDKVKCTV 132
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNKALLQK 121
+GRE + +A L+RR D+ E A + R+ RN+ + L P KA L K
Sbjct: 133 IFRGREIQHTALAEVLLRRMAKDLEEPAEVQQPPKREGRNMIMFLTPRKAPLLK 186
>gi|33864629|ref|NP_896188.1| translation initiation factor IF-3 [Synechococcus sp. WH 8102]
gi|39931219|sp|Q7UA08.1|IF3_SYNPX RecName: Full=Translation initiation factor IF-3
gi|33632152|emb|CAE06608.1| translation initiation factor IF-3 [Synechococcus sp. WH 8102]
Length = 217
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/117 (43%), Positives = 73/117 (62%), Gaps = 3/117 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+++EQ+KK K +KKS ++ ++KE+KM Y IDQHDY VR+ A +FLK GDKVK V
Sbjct: 75 GKFKFEQEKKAKEAKKKS--HQTEVKEVKMRYKIDQHDYDVRIGQAVRFLKAGDKVKCTV 132
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNKALLQKAQE 124
+GRE + +A L+RR D+ E A + R+ RN+ + L P K L K +E
Sbjct: 133 IFRGREIQHTALAETLLRRMAKDLEEKAEIQQAPKREGRNMIMFLTPRKTPLVKKEE 189
>gi|116074375|ref|ZP_01471637.1| translation initiation factor IF-3 [Synechococcus sp. RS9916]
gi|116069680|gb|EAU75432.1| translation initiation factor IF-3 [Synechococcus sp. RS9916]
Length = 218
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 79/132 (59%), Gaps = 6/132 (4%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+++EQ+KK K +KKS ++ ++KE+KM Y IDQHDY VR+ A++FLK GDKVK V
Sbjct: 75 GKFKFEQEKKAKEAKKKS--HQTEVKEVKMRYKIDQHDYDVRIGQAQRFLKAGDKVKCTV 132
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNKALLQKAQEPPK 127
+GRE + +A L+RR D+ E A + R+ RN+ + L P K L K K
Sbjct: 133 IFRGREIQHTALAEVLLRRMAKDLEEQAEIQQAPKREGRNMIMFLTPRKTPLVKKD---K 189
Query: 128 KKDKQVVDEVST 139
D+ VV V T
Sbjct: 190 ADDQPVVKAVRT 201
>gi|78780114|ref|YP_398226.1| translation initiation factor IF-3 [Prochlorococcus marinus str.
MIT 9312]
gi|123768927|sp|Q318A5.1|IF3_PROM9 RecName: Full=Translation initiation factor IF-3
gi|78713613|gb|ABB50790.1| bacterial translation initiation factor 3 (bIF-3) [Prochlorococcus
marinus str. MIT 9312]
Length = 190
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 74/117 (63%), Gaps = 3/117 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY++EQ+KK K +KKS ++ ++KE+KM Y ID+HDY VR+ A KFLK GDKVK V
Sbjct: 75 GKYKFEQEKKAKEARKKS--HQTEVKEVKMRYKIDKHDYDVRIGQATKFLKSGDKVKCTV 132
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNKALLQKAQE 124
+GRE + N+A L+ + ND+ E + + K R+ RN+ + L P K L K E
Sbjct: 133 FFRGREIQHSNLAETLLLKMANDLEEQSEIQQKPKREGRNMIMFLSPRKTPLIKKDE 189
>gi|334345232|ref|YP_004553784.1| translation initiation factor IF-3 [Sphingobium chlorophenolicum
L-1]
gi|334101854|gb|AEG49278.1| Translation initiation factor IF-3 [Sphingobium chlorophenolicum
L-1]
Length = 177
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 63/111 (56%), Gaps = 3/111 (2%)
Query: 5 YFFLSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKV 64
+ + KY+YE QKK +K +LKE+KM NID HDY ++K F+ DGDKV
Sbjct: 68 FLDIGKYKYEAQKKANIARKTQKTQ--ELKEIKMRPNIDDHDYDTKMKKVHDFIGDGDKV 125
Query: 65 KVIVNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
K+ + +GRE + + ++L++R +VGE+A E R + ++L P
Sbjct: 126 KITLRFRGRELSHQQLGMQLLQRVAENVGEIAKVEAYPRMEGRQMLMVLAP 176
>gi|428219377|ref|YP_007103842.1| translation initiation factor 3 (bIF-3) [Pseudanabaena sp. PCC
7367]
gi|427991159|gb|AFY71414.1| bacterial translation initiation factor 3 (bIF-3) [Pseudanabaena
sp. PCC 7367]
Length = 177
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Query: 32 DLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQND 91
DLKE+KM Y ID+HDY VR+ A +FLK GDKVK V +GRE + N+A +L+ R ND
Sbjct: 88 DLKEVKMRYKIDEHDYQVRINHASRFLKGGDKVKATVMFRGREIQHVNLAEDLLNRMAND 147
Query: 92 VGELASEENKNFRD-RNIFIILVPNKA 117
+ E+A + R+ RN+ +++ P K
Sbjct: 148 LMEVADIQQAPKREGRNMTMLMAPKKT 174
>gi|443476689|ref|ZP_21066582.1| bacterial translation initiation factor 3 (bIF-3) [Pseudanabaena
biceps PCC 7429]
gi|443018321|gb|ELS32594.1| bacterial translation initiation factor 3 (bIF-3) [Pseudanabaena
biceps PCC 7429]
Length = 174
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 70/109 (64%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+++EQ+KK + +KK + D+KE+KM Y I++HDY VR+ A +FLK+GDKVK V
Sbjct: 68 GKFKFEQEKKAREARKKQHTS--DVKEVKMRYKIEEHDYKVRINHAERFLKEGDKVKATV 125
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + ++A L+ R +D+ +A + R+ RNI +++ P K
Sbjct: 126 MFRGREIQHVDLAEVLLNRMASDLESVAEIQQYPKREGRNITMLMAPKK 174
>gi|320529199|ref|ZP_08030291.1| translation initiation factor IF-3 [Selenomonas artemidis F0399]
gi|320138829|gb|EFW30719.1| translation initiation factor IF-3 [Selenomonas artemidis F0399]
Length = 214
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 75/124 (60%), Gaps = 3/124 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+RYEQQK++K +KK + +KE+K+ NID+HD++V+LK A +F+++G+KVKV +
Sbjct: 85 GKFRYEQQKREKEAKKKQKT--ISIKEVKLRPNIDEHDFNVKLKNALRFVEEGNKVKVTI 142
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKALLQKAQEPPK 127
+GRE + ++ R +G+L S E +N+ +IL P K +P K
Sbjct: 143 MFRGRELSHPELGRVVLDRVSERMGDLVSIERGAKLEGKNMTMILSPKAQKPAKVSKPAK 202
Query: 128 KKDK 131
++DK
Sbjct: 203 QEDK 206
>gi|402302262|ref|ZP_10821380.1| translation initiation factor IF-3 [Selenomonas sp. FOBRC9]
gi|400380903|gb|EJP33710.1| translation initiation factor IF-3 [Selenomonas sp. FOBRC9]
Length = 214
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 75/124 (60%), Gaps = 3/124 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+RYEQQK++K +KK + +KE+K+ NID+HD++V+LK A +F+++G+KVKV +
Sbjct: 85 GKFRYEQQKREKEAKKKQKT--ISIKEVKLRPNIDEHDFNVKLKNALRFVEEGNKVKVTI 142
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKALLQKAQEPPK 127
+GRE + ++ R +G+L S E +N+ +IL P K +P K
Sbjct: 143 MFRGRELSHPELGRVVLDRVSERMGDLVSIERGAKLEGKNMTMILSPKAQKPAKVSKPAK 202
Query: 128 KKDK 131
++DK
Sbjct: 203 QEDK 206
>gi|218438894|ref|YP_002377223.1| translation initiation factor IF-3 [Cyanothece sp. PCC 7424]
gi|218171622|gb|ACK70355.1| translation initiation factor IF-3 [Cyanothece sp. PCC 7424]
Length = 177
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
Query: 32 DLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQND 91
D+KE+KM Y ID HDY VR+ A++FLK GDKVK + +GRE + N+A EL++R D
Sbjct: 92 DVKEVKMRYKIDDHDYHVRVNQAQRFLKSGDKVKATITFRGREIQHANLAEELLQRMATD 151
Query: 92 VGELASEENKNFRD-RNIFIILVPNK 116
+ E+A + ++ RN+ ++L P K
Sbjct: 152 LQEIAEVQQAPKKEGRNMMMLLSPKK 177
>gi|395785349|ref|ZP_10465081.1| translation initiation factor IF-3 [Bartonella tamiae Th239]
gi|423717752|ref|ZP_17691942.1| translation initiation factor IF-3 [Bartonella tamiae Th307]
gi|395424896|gb|EJF91067.1| translation initiation factor IF-3 [Bartonella tamiae Th239]
gi|395427152|gb|EJF93268.1| translation initiation factor IF-3 [Bartonella tamiae Th307]
Length = 180
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 66/108 (61%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y+ QKK +KK +++KE+KM NID HDY V++KA +FL+DGDKVK+
Sbjct: 74 LGKLKYQNQKKASEARKKQKT--VEIKEIKMRPNIDSHDYGVKMKAVSRFLEDGDKVKIT 131
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE + + ++L+ R ++D ++A E R + +++ P
Sbjct: 132 LRFRGREMAHQELGMKLLNRVKDDTVDIAKVEAEPKLEGRQMMMVVAP 179
>gi|395767534|ref|ZP_10448067.1| translation initiation factor IF-3 [Bartonella doshiae NCTC 12862]
gi|395413897|gb|EJF80350.1| translation initiation factor IF-3 [Bartonella doshiae NCTC 12862]
Length = 172
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 65/108 (60%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y+ QKK +KK +++KE+KM N+D HDY V+LKA +F+ +GDKVK+
Sbjct: 66 LGKLKYQTQKKAAETRKKQKV--IEIKEIKMRPNVDVHDYGVKLKAVHRFIDNGDKVKIT 123
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE +++ + L++R + D E+A E R + +++ P
Sbjct: 124 LRFRGREMAHQDLGLRLLQRVKEDTSEIAKIESEPKLEGRQMMMVIAP 171
>gi|316931436|ref|YP_004106418.1| translation initiation factor IF-3 [Rhodopseudomonas palustris
DX-1]
gi|315599150|gb|ADU41685.1| translation initiation factor IF-3 [Rhodopseudomonas palustris
DX-1]
Length = 179
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+Y QKK +KK +++KE+K+ ID HDY V++KA +F ++GDKVK+ +
Sbjct: 74 GKYKYSAQKKAAEARKKQKI--VEIKEIKLRPMIDDHDYDVKMKAMLRFFEEGDKVKITL 131
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE + I +L+ + +NDV E+A E++ F R + ++L P
Sbjct: 132 RYRGREMAHQEIGTKLLEKVKNDVAEIAKVEQDARFEGRQVVMVLAP 178
>gi|67920432|ref|ZP_00513952.1| Initiation factor 3 [Crocosphaera watsonii WH 8501]
gi|416377029|ref|ZP_11683531.1| Translation initiation factor 3 [Crocosphaera watsonii WH 0003]
gi|67857916|gb|EAM53155.1| Initiation factor 3 [Crocosphaera watsonii WH 8501]
gi|357266305|gb|EHJ14956.1| Translation initiation factor 3 [Crocosphaera watsonii WH 0003]
Length = 179
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 69/108 (63%), Gaps = 3/108 (2%)
Query: 10 KYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVN 69
KY++EQ+KK + + K + D+KE+KM Y I +HDY VR+ A++FLK GDKVK +
Sbjct: 71 KYKFEQEKKAR--EAKKKQHTADVKEVKMRYKISEHDYQVRVNQAKRFLKSGDKVKATIT 128
Query: 70 LKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + N+A +L+ R D+ ELA + R+ RN+ +++ P K
Sbjct: 129 FRGREIQHSNLAQDLLSRMATDLKELAEIQQAPKREGRNMMMLMSPKK 176
>gi|123969378|ref|YP_001010236.1| translation initiation factor IF-3 [Prochlorococcus marinus str.
AS9601]
gi|166198966|sp|A2BTL8.1|IF3_PROMS RecName: Full=Translation initiation factor IF-3
gi|123199488|gb|ABM71129.1| Translation Initiation factor 3 [Prochlorococcus marinus str.
AS9601]
Length = 190
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 73/114 (64%), Gaps = 3/114 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY++EQ+KK K +KKS ++ ++KE+KM Y ID+HDY VR+ A KFLK GDKVK V
Sbjct: 75 GKYKFEQEKKAKEARKKS--HQTEVKEVKMRYKIDKHDYDVRIGQATKFLKSGDKVKCTV 132
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNKALLQK 121
+GRE + N+A L+ + ND+ E + + K R+ RN+ + L P K L K
Sbjct: 133 IFRGREIQHSNLAETLLLKMANDLEEQSEVQQKPKREGRNMIMFLSPRKTPLIK 186
>gi|160934430|ref|ZP_02081817.1| hypothetical protein CLOLEP_03303 [Clostridium leptum DSM 753]
gi|156867103|gb|EDO60475.1| translation initiation factor IF-3 [Clostridium leptum DSM 753]
Length = 203
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYR+EQ K++K +K + +D+KE+++ NID HD++ +L A++F+ +GDKVKV +
Sbjct: 95 GKYRFEQAKREKEARKNQ--HIVDIKEIRLSLNIDTHDFNTKLGHAKRFISEGDKVKVSI 152
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE + E++R+F + E A+ E+ RN+ + L P
Sbjct: 153 RFRGREMGHPELGYEIMRKFADSCAEFANIEKPAKLEGRNMLMFLAP 199
>gi|406981494|gb|EKE02958.1| translation initiation factor IF-3 [uncultured bacterium]
Length = 135
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 60/89 (67%), Gaps = 2/89 (2%)
Query: 31 MDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQN 90
+++KE+KM Y ID HDY VR+K +KFLK G+KVKV+V LKGRE + +A +L R +N
Sbjct: 47 VEVKEVKMRYKIDTHDYDVRMKNIKKFLKAGNKVKVVVMLKGREIQHSKLAFDLANRIKN 106
Query: 91 DVGE--LASEENKNFRDRNIFIILVPNKA 117
D+ + E+N +N+ +IL P+++
Sbjct: 107 DLQDTNFTIEKNPGMEGKNLVMILAPSES 135
>gi|395764914|ref|ZP_10445534.1| translation initiation factor IF-3 [Bartonella sp. DB5-6]
gi|395413731|gb|EJF80193.1| translation initiation factor IF-3 [Bartonella sp. DB5-6]
Length = 132
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 66/108 (61%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y+ QKK +KK +++KE+KM N+D HDY V+LKA +F+ +GDKVK+
Sbjct: 26 LGKLKYQTQKKAAETRKKQKV--IEIKEIKMRPNVDVHDYEVKLKAVHRFIGNGDKVKIT 83
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE +++ ++L++R + D E+A E R + +++ P
Sbjct: 84 LRFRGREMAHQDLGLKLLQRVKEDTCEIAKIESEPKLEGRQMMMVIAP 131
>gi|397677108|ref|YP_006518646.1| translation initiation factor IF-3 [Zymomonas mobilis subsp.
mobilis ATCC 29191]
gi|395397797|gb|AFN57124.1| Translation initiation factor IF-3 [Zymomonas mobilis subsp.
mobilis ATCC 29191]
Length = 169
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 66/111 (59%), Gaps = 3/111 (2%)
Query: 5 YFFLSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKV 64
+ + KY+YE QKK +K ++KE+K+ NIDQHDY ++K +FL+DGDKV
Sbjct: 60 FLDVGKYKYEAQKKANLARKTQKTQ--EIKEIKLRPNIDQHDYDTKMKKVIQFLEDGDKV 117
Query: 65 KVIVNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
KV + +GRE + +++++R Q D E+A E++ R + +++ P
Sbjct: 118 KVTLRFRGREMAHGQLGMQVMQRVQADTQEIAKVEQHPRMEGRQMLMVVAP 168
>gi|339024999|ref|ZP_08646873.1| translation initiation Factor 3 (IF-3) [Acetobacter tropicalis NBRC
101654]
gi|338749989|dbj|GAA10177.1| translation initiation Factor 3 (IF-3) [Acetobacter tropicalis NBRC
101654]
Length = 144
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 70/107 (65%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YEQQKK+ +KK +++KE+K+ NID++DY V++++ + FL DGDKVKV +
Sbjct: 39 GKFKYEQQKKRNEARKKQKV--IEIKEVKVRPNIDENDYQVKMRSVKSFLGDGDKVKVTL 96
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE + + I+++ R + ++ ELA E+ +R + ++L P
Sbjct: 97 RFRGREMAHQELGIKVLERIRTEMDELAKVEQMPRLENRQMIMVLAP 143
>gi|56552802|ref|YP_163641.1| translation initiation factor IF-3 [Zymomonas mobilis subsp.
mobilis ZM4]
gi|61213066|sp|Q5NL80.1|IF3_ZYMMO RecName: Full=Translation initiation factor IF-3
gi|56544376|gb|AAV90530.1| translation initiation factor IF-3 [Zymomonas mobilis subsp.
mobilis ZM4]
Length = 179
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 66/111 (59%), Gaps = 3/111 (2%)
Query: 5 YFFLSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKV 64
+ + KY+YE QKK +K ++KE+K+ NIDQHDY ++K +FL+DGDKV
Sbjct: 70 FLDVGKYKYEAQKKANLARKTQKTQ--EIKEIKLRPNIDQHDYDTKMKKIVQFLEDGDKV 127
Query: 65 KVIVNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
KV + +GRE + +++++R Q D E+A E++ R + +++ P
Sbjct: 128 KVTLRFRGREMAHGQLGMQVMQRVQADTQEIAKVEQHPRMEGRQMLMVVAP 178
>gi|124026795|ref|YP_001015910.1| translation initiation factor IF-3 [Prochlorococcus marinus str.
NATL1A]
gi|166198963|sp|A2C586.1|IF3_PROM1 RecName: Full=Translation initiation factor IF-3
gi|123961863|gb|ABM76646.1| Translation Initiation factor 3 [Prochlorococcus marinus str.
NATL1A]
Length = 202
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 77/123 (62%), Gaps = 6/123 (4%)
Query: 10 KYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVN 69
K+++EQ+KK K +KKS ++ ++KE+KM Y IDQHDY VR+ A +FLK GDKVK V
Sbjct: 76 KFKFEQEKKAKEAKKKS--HQTEVKEVKMRYKIDQHDYQVRISQATRFLKAGDKVKCTVI 133
Query: 70 LKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNKA-LLQKAQEP-- 125
+GRE + +A L++R D+ E A + R+ RN+ + L P K LL+K E
Sbjct: 134 FRGREIQHTALAETLLKRMSKDLEEKAEVQQSPKREGRNMIMFLTPRKTPLLKKESETTE 193
Query: 126 PKK 128
PKK
Sbjct: 194 PKK 196
>gi|383753781|ref|YP_005432684.1| putative translation initiation factor IF-3 [Selenomonas
ruminantium subsp. lactilytica TAM6421]
gi|381365833|dbj|BAL82661.1| putative translation initiation factor IF-3 [Selenomonas
ruminantium subsp. lactilytica TAM6421]
Length = 167
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 73/118 (61%), Gaps = 6/118 (5%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYRYEQQK++K +KK +++KE+K+ NI+QHD+ V+LK A +F+++G+KVKV +
Sbjct: 48 GKYRYEQQKREKEAKKKQKV--INIKEVKLRPNIEQHDFDVKLKNALRFVEEGNKVKVTI 105
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKALLQKAQEP 125
+GRE + E++ R +G+ S E N +N+ +I+ P QKA +P
Sbjct: 106 MFRGRELSHPELGKEVLGRVAEALGDRVSIERNAKLEGKNMTMIVAPK---AQKASKP 160
>gi|33241247|ref|NP_876189.1| translation initiation factor IF-3 [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
gi|39931228|sp|Q7V9N2.1|IF3_PROMA RecName: Full=Translation initiation factor IF-3
gi|33238777|gb|AAQ00842.1| Translation initiation factor 3 [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
Length = 201
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/118 (43%), Positives = 75/118 (63%), Gaps = 4/118 (3%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+++EQ+KK K +KKS ++ ++KE+KM Y ID+HDY VR+ A +FLK GDKVK V
Sbjct: 75 GKFKFEQEKKAKEAKKKS--HQTEVKEVKMRYKIDEHDYQVRIGQATRFLKAGDKVKCTV 132
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNKA-LLQKAQE 124
+GRE + N+A L+ R D+ E A + R+ RN+ + L P K L++K QE
Sbjct: 133 IFRGREIQHTNLAESLLARMAKDLEEPAEVQQAPKREGRNMIMFLTPRKTPLIKKEQE 190
>gi|123967058|ref|YP_001012139.1| translation initiation factor IF-3 [Prochlorococcus marinus str.
MIT 9515]
gi|166198965|sp|A2BZ21.1|IF3_PROM5 RecName: Full=Translation initiation factor IF-3
gi|123201424|gb|ABM73032.1| Translation Initiation factor 3 [Prochlorococcus marinus str. MIT
9515]
Length = 195
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/117 (43%), Positives = 75/117 (64%), Gaps = 3/117 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY++EQ+KK K +KKS ++ ++KE+KM Y ID+HDY VR+ A +FLK GDKVK V
Sbjct: 75 GKYKFEQEKKAKEARKKS--HQTEVKEVKMRYKIDKHDYDVRIGQAVRFLKAGDKVKCTV 132
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNKALLQKAQE 124
+GRE + N+A L+ R ND+ E + + + R+ RN+ + L P K L K +E
Sbjct: 133 IFRGREIQHSNLAETLLLRMANDLEEQSEVQQRPKREGRNMIMFLSPRKTPLIKKEE 189
>gi|260753471|ref|YP_003226364.1| translation initiation factor IF-3 [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
gi|384412175|ref|YP_005621540.1| translation initiation factor IF-3 [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|258552834|gb|ACV75780.1| translation initiation factor IF-3 [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
gi|335932549|gb|AEH63089.1| translation initiation factor IF-3 [Zymomonas mobilis subsp.
mobilis ATCC 10988]
Length = 169
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 66/111 (59%), Gaps = 3/111 (2%)
Query: 5 YFFLSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKV 64
+ + KY+YE QKK +K ++KE+K+ NIDQHDY ++K +FL+DGDKV
Sbjct: 60 FLDVGKYKYEAQKKANLARKTQKTQ--EIKEIKLRPNIDQHDYDTKMKKIVQFLEDGDKV 117
Query: 65 KVIVNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
KV + +GRE + +++++R Q D E+A E++ R + +++ P
Sbjct: 118 KVTLRFRGREMAHGQLGMQVMQRVQADTQEIAKVEQHPRMEGRQMLMVVAP 168
>gi|375089711|ref|ZP_09736036.1| translation initiation factor IF-3 [Facklamia languida CCUG 37842]
gi|374566558|gb|EHR37797.1| translation initiation factor IF-3 [Facklamia languida CCUG 37842]
Length = 195
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 68/107 (63%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYRYEQQKK+K Q+K A +++KE+++ +ID HDY +L+ A KFL+ GDKVK +
Sbjct: 85 GKYRYEQQKKEKEQRKN--AKVINVKEVRLSPSIDDHDYQTKLRQAIKFLEKGDKVKASI 142
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVP 114
+GR +++ +++ F D E+A E+K R++F++L P
Sbjct: 143 RFRGRSITHKDLGRDVLEDFIEDTQEVAIVESKPTMEGRSMFMLLAP 189
>gi|159904304|ref|YP_001551648.1| translation initiation factor IF-3 [Prochlorococcus marinus str.
MIT 9211]
gi|226713805|sp|A9BD81.1|IF3_PROM4 RecName: Full=Translation initiation factor IF-3
gi|159889480|gb|ABX09694.1| Translation Initiation factor 3 [Prochlorococcus marinus str. MIT
9211]
Length = 202
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 71/114 (62%), Gaps = 3/114 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+++EQ+KK K +KKS ++ ++KE+KM Y IDQHDY VR+ A +FLK GDKVK V
Sbjct: 75 GKFKFEQEKKAKEAKKKS--HQTEVKEVKMRYKIDQHDYEVRINQATRFLKAGDKVKCTV 132
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNKALLQK 121
+GRE + N+A L+ R D+ E A + R+ RN+ + L P K L K
Sbjct: 133 IFRGREIQHTNLAESLLARMAKDLEEQAEVQQTPKREGRNMIMFLTPRKTPLIK 186
>gi|407975386|ref|ZP_11156291.1| translation initiation factor IF-3 [Nitratireductor indicus C115]
gi|407429014|gb|EKF41693.1| translation initiation factor IF-3 [Nitratireductor indicus C115]
Length = 169
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 65/108 (60%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y+ QKK +KK +++KE+KM NID HDY V++KA R+F ++GDKVK+
Sbjct: 62 LGKMKYQSQKKAAEARKKQKT--IEIKEIKMRPNIDTHDYEVKMKAVRRFFEEGDKVKLT 119
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE + ++L+ R + +V E+A E R + ++L P
Sbjct: 120 LRFRGREMAHMELGMQLLNRVREEVEEIAKVEAEPKLEGRQMMMVLAP 167
>gi|438001655|ref|YP_007271398.1| Translation initiation factor 3 [Tepidanaerobacter acetatoxydans
Re1]
gi|432178449|emb|CCP25422.1| Translation initiation factor 3 [Tepidanaerobacter acetatoxydans
Re1]
Length = 168
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 67/110 (60%), Gaps = 3/110 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YEQ K++K +KK A +++KE++M ID+HD+ VRLK KFLKDGDKVKV +
Sbjct: 57 GKYKYEQSKREKEARKK--AKVINVKEIRMNPTIDEHDFQVRLKNTIKFLKDGDKVKVSI 114
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILVPNKA 117
+GR+ + E++ R ++ E+ E+ RN+ +++ P +
Sbjct: 115 RFRGRQMTHTKLGEEVLNRVVENISEVGVVEKPPKMEGRNMVMVIAPKQT 164
>gi|390935298|ref|YP_006392803.1| translation initiation factor IF-3 [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389570799|gb|AFK87204.1| Translation initiation factor IF-3 [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 155
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 70/107 (65%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYRYEQ KK+K +KK +++KE++M I++HD+ V++K+A KFLKDGDKVKV +
Sbjct: 48 GKYRYEQSKKEKESKKKQKV--INIKEIRMTPAIEEHDFGVKVKSAMKFLKDGDKVKVTI 105
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE N+A EL+ RF + E + E+ N RN+ +IL P
Sbjct: 106 RFRGREASHTNLAEELLNRFAKSLEEYGNVEKAPNMEGRNLMMILAP 152
>gi|395789086|ref|ZP_10468616.1| translation initiation factor IF-3 [Bartonella taylorii 8TBB]
gi|395431220|gb|EJF97247.1| translation initiation factor IF-3 [Bartonella taylorii 8TBB]
Length = 132
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 66/108 (61%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y+ QKK +KK +++KE+KM N+D HDY V+LKA +F+ +GDKVKV
Sbjct: 26 LGKLKYQTQKKAAETRKKQKV--IEIKEIKMRPNVDVHDYEVKLKAVHRFIGNGDKVKVT 83
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE +++ ++L++R + D E++ E R + +++ P
Sbjct: 84 LRFRGREMAHQDLGLKLLQRVKEDTSEISKIESEPKLEGRQMMMVIAP 131
>gi|260584104|ref|ZP_05851852.1| translation initiation factor IF-3 [Granulicatella elegans ATCC
700633]
gi|260158730|gb|EEW93798.1| translation initiation factor IF-3 [Granulicatella elegans ATCC
700633]
Length = 167
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 69/107 (64%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYR+EQQKK++ +K +++KE+++ ID++D++ +LKAA+KFL+ GDKVK +
Sbjct: 59 GKYRFEQQKKEREARKNQKV--INIKEVRLSPTIDENDFNTKLKAAQKFLEKGDKVKATI 116
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I +++ R V ELA+ E K D R++F++L P
Sbjct: 117 RFKGRAITHKEIGQKVLERLAEQVSELATVEQKAKMDGRSMFLMLAP 163
>gi|376262395|ref|YP_005149115.1| translation initiation factor IF-3 [Clostridium sp. BNL1100]
gi|373946389|gb|AEY67310.1| translation initiation factor IF-3 [Clostridium sp. BNL1100]
Length = 176
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 68/111 (61%), Gaps = 7/111 (6%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY +EQ KK+K +K + +KE+++ ID+HD+ V++K+A KFLKDGDKVKV V
Sbjct: 69 GKYLFEQGKKEKEAKKNQKV--VSIKEVRLSAKIDEHDFDVKVKSAYKFLKDGDKVKVSV 126
Query: 69 NLKGRENEFRNIAIELIRRFQ---NDVGELASEENKNFRDRNIFIILVPNK 116
+GRE ++ + E++ +F NDVG E +N+ +IL PNK
Sbjct: 127 KFRGREMKYTSDGKEVLEKFAQAVNDVG--VPERQPKLEGKNMIVILNPNK 175
>gi|291287862|ref|YP_003504678.1| translation initiation factor IF-3 [Denitrovibrio acetiphilus DSM
12809]
gi|290885022|gb|ADD68722.1| translation initiation factor IF-3 [Denitrovibrio acetiphilus DSM
12809]
Length = 184
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 70/107 (65%), Gaps = 1/107 (0%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SK+++E+ KK + +KK AN++D KE+K I++HDY V++K +KFL GDKVKV++
Sbjct: 72 SKFKFEKNKKDREARKKQRANQVDTKEVKFRPKIEEHDYEVKMKNVKKFLSAGDKVKVVL 131
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVP 114
+GRE F+ + ++L+ R ++D+ L + + K + R +++ P
Sbjct: 132 RYRGREMMFQEMGLQLLNRIKDDIEGLGTVDKKPEMQGRQQIMMVSP 178
>gi|317968497|ref|ZP_07969887.1| translation initiation factor IF-3 [Synechococcus sp. CB0205]
Length = 213
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/112 (44%), Positives = 72/112 (64%), Gaps = 3/112 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+++EQ+KK K +KKS ++ ++KE+KM Y IDQHDY VRL A +FLK GDKVK V
Sbjct: 75 GKFKFEQEKKAKEAKKKS--HQTEVKEVKMRYKIDQHDYDVRLGQASRFLKAGDKVKCTV 132
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNKALL 119
+GRE + +A +L+RR D+ E A + + R+ RN+ + L P K L
Sbjct: 133 IFRGREIQHTALAEQLLRRMAKDLEEKAEIQQEPKREGRNMIMFLSPRKTPL 184
>gi|407781288|ref|ZP_11128507.1| translation initiation factor IF-3 [Oceanibaculum indicum P24]
gi|407208171|gb|EKE78097.1| translation initiation factor IF-3 [Oceanibaculum indicum P24]
Length = 140
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 68/107 (63%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE QKK+ +K +++KE+KM NID HDY V++++ KFL +GDKVKV +
Sbjct: 35 GKFKYEAQKKRNEARKNQKV--IEVKEIKMRPNIDDHDYDVKMRSVNKFLNEGDKVKVTM 92
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE ++I + ++ R ++DV E+A E++ R + +++ P
Sbjct: 93 RFRGREMAHQDIGMNVLMRVKDDVEEVAKVEQHPKLEGRQMVMVIAP 139
>gi|397689073|ref|YP_006526327.1| translation initiation factor IF-3 [Melioribacter roseus P3M]
gi|395810565|gb|AFN73314.1| translation initiation factor IF-3 [Melioribacter roseus P3M]
Length = 169
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 66/110 (60%), Gaps = 3/110 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+ YEQQK++K Q+KK LKE+++ N D HD+ + + A KF++DG+KVKV V
Sbjct: 57 GKFAYEQQKREKMQKKKQQVTV--LKEIRLHPNTDTHDFEFKARHAAKFIEDGNKVKVSV 114
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKA 117
KGRE + I EL+R+F + + ++A E+ F R + IL P K
Sbjct: 115 IFKGRELAYTEIGEELLRKFLDKLSDVAKVEQEPKFEGRAMHAILAPQKG 164
>gi|166365759|ref|YP_001658032.1| translation initiation factor IF-3 [Microcystis aeruginosa
NIES-843]
gi|390442130|ref|ZP_10230148.1| Translation initiation factor IF-3 [Microcystis sp. T1-4]
gi|425466416|ref|ZP_18845714.1| Translation initiation factor IF-3 [Microcystis aeruginosa PCC
9809]
gi|189028354|sp|B0JKQ1.1|IF3_MICAN RecName: Full=Translation initiation factor IF-3
gi|166088132|dbj|BAG02840.1| initiation factor IF-3 [Microcystis aeruginosa NIES-843]
gi|389831103|emb|CCI26438.1| Translation initiation factor IF-3 [Microcystis aeruginosa PCC
9809]
gi|389834574|emb|CCI34274.1| Translation initiation factor IF-3 [Microcystis sp. T1-4]
Length = 176
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 72/109 (66%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY++EQ+KK + +KK + D+KE+KM Y ID+HDY+VR+ A++FLK GDKVK +
Sbjct: 70 GKYKFEQEKKAREAKKKQ--HTADIKEVKMRYKIDEHDYNVRVNQAQRFLKAGDKVKATI 127
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + N+A EL+ R D+ ++A + ++ RN+ ++L P K
Sbjct: 128 TFRGREIQHSNLAEELLARMAKDLQDVAEVQQAPKKEGRNMMMMLSPKK 176
>gi|395780453|ref|ZP_10460915.1| translation initiation factor IF-3 [Bartonella washoensis 085-0475]
gi|423711952|ref|ZP_17686257.1| translation initiation factor IF-3 [Bartonella washoensis Sb944nv]
gi|395412800|gb|EJF79280.1| translation initiation factor IF-3 [Bartonella washoensis Sb944nv]
gi|395418799|gb|EJF85116.1| translation initiation factor IF-3 [Bartonella washoensis 085-0475]
Length = 172
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 66/108 (61%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y+ QKK +KK +++KE+KM N+D HDY V+L+A +F+ +GDKVK+
Sbjct: 66 LGKLKYQTQKKAAETRKKQKV--IEIKEIKMRPNVDVHDYEVKLRAVHRFIGNGDKVKIT 123
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE +++ ++L++R + D E+A E R + +++ P
Sbjct: 124 LRFRGREMAHQDLGMKLLQRVKEDTSEIAKIESEPKLEGRQMMMVIAP 171
>gi|374299175|ref|YP_005050814.1| translation initiation factor IF-3 [Desulfovibrio africanus str.
Walvis Bay]
gi|332552111|gb|EGJ49155.1| Translation initiation factor IF-3 [Desulfovibrio africanus str.
Walvis Bay]
Length = 175
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 74/115 (64%), Gaps = 6/115 (5%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YEQQKK +G +KKS+ ++ +KE+K D+HDY ++K R+F++DGD+ K ++
Sbjct: 66 GKYKYEQQKKTQGARKKSS--QVQIKEIKFRPKTDEHDYQTKVKHIRRFIEDGDRCKAVI 123
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKALLQKA 122
+GRE ++ + +++R D+ ++A E+ F R + ++LVP L++KA
Sbjct: 124 FFRGREIVHKDRGLVILKRVAEDLKDIAKVEQEPQFEGRTMNMMLVP---LVKKA 175
>gi|333896855|ref|YP_004470729.1| translation initiation factor IF-3 [Thermoanaerobacterium
xylanolyticum LX-11]
gi|333112120|gb|AEF17057.1| Translation initiation factor IF-3 [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 170
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 70/107 (65%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYRYEQ KK+K +KK +++KE++M I++HD+ V++K+A KFLKDGDKVKV +
Sbjct: 63 GKYRYEQSKKEKESKKKQKV--INIKEIRMTPAIEEHDFGVKVKSAMKFLKDGDKVKVTI 120
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE N+A EL+ RF + E + E+ N RN+ +IL P
Sbjct: 121 RFRGREASHTNLAEELLNRFAKSLEEYGNVEKAPNMEGRNLMMILAP 167
>gi|425435888|ref|ZP_18816332.1| Translation initiation factor IF-3 [Microcystis aeruginosa PCC
9432]
gi|425444745|ref|ZP_18824788.1| Translation initiation factor IF-3 [Microcystis aeruginosa PCC
9443]
gi|425449389|ref|ZP_18829229.1| Translation initiation factor IF-3 [Microcystis aeruginosa PCC
7941]
gi|425454071|ref|ZP_18833818.1| Translation initiation factor IF-3 [Microcystis aeruginosa PCC
9807]
gi|425460928|ref|ZP_18840408.1| Translation initiation factor IF-3 [Microcystis aeruginosa PCC
9808]
gi|440754208|ref|ZP_20933410.1| translation initiation factor IF-3 [Microcystis aeruginosa TAIHU98]
gi|443666318|ref|ZP_21133753.1| translation initiation factor IF-3 [Microcystis aeruginosa
DIANCHI905]
gi|159030118|emb|CAO91010.1| infC [Microcystis aeruginosa PCC 7806]
gi|389679486|emb|CCH91720.1| Translation initiation factor IF-3 [Microcystis aeruginosa PCC
9432]
gi|389735451|emb|CCI01049.1| Translation initiation factor IF-3 [Microcystis aeruginosa PCC
9443]
gi|389763937|emb|CCI09633.1| Translation initiation factor IF-3 [Microcystis aeruginosa PCC
7941]
gi|389805334|emb|CCI14893.1| Translation initiation factor IF-3 [Microcystis aeruginosa PCC
9807]
gi|389826290|emb|CCI23313.1| Translation initiation factor IF-3 [Microcystis aeruginosa PCC
9808]
gi|440174414|gb|ELP53783.1| translation initiation factor IF-3 [Microcystis aeruginosa TAIHU98]
gi|443331228|gb|ELS45896.1| translation initiation factor IF-3 [Microcystis aeruginosa
DIANCHI905]
Length = 176
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 72/109 (66%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY++EQ+KK + +KK + D+KE+KM Y ID+HDY+VR+ A++FLK GDKVK +
Sbjct: 70 GKYKFEQEKKAREAKKKQ--HTADIKEVKMRYKIDEHDYNVRVNQAQRFLKAGDKVKATI 127
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + N+A EL+ R D+ ++A + ++ RN+ ++L P K
Sbjct: 128 TFRGREIQHSNLAEELLARMAKDLEDVAEVQQAPKKEGRNMMMMLSPKK 176
>gi|318042883|ref|ZP_07974839.1| translation initiation factor IF-3 [Synechococcus sp. CB0101]
Length = 215
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 71/112 (63%), Gaps = 3/112 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+++EQ+KK K +KKS ++ ++KE+KM Y IDQHDY VR+ A +FLK GDKVK V
Sbjct: 75 GKFKFEQEKKAKEAKKKS--HQTEVKEVKMRYKIDQHDYDVRIGQASRFLKAGDKVKCTV 132
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNKALL 119
+GRE + +A +L+RR D+ E A + R+ RN+ + L P K L
Sbjct: 133 IFRGREIQHTALAEQLLRRMAKDLEEKAEIQQDPKREGRNMIMFLTPRKTPL 184
>gi|115522528|ref|YP_779439.1| translation initiation factor IF-3 [Rhodopseudomonas palustris
BisA53]
gi|115516475|gb|ABJ04459.1| bacterial translation initiation factor 3 (bIF-3) [Rhodopseudomonas
palustris BisA53]
Length = 151
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 67/107 (62%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++Y QKK +KK +++KE+K+ ID HDY V+++A ++F ++GDKVK+ +
Sbjct: 46 GKFKYSAQKKAAEARKKQKV--VEIKEIKLRPMIDDHDYDVKMRAMQRFFEEGDKVKITL 103
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE ++I I+L+ + + DV E A E++ F R + ++L P
Sbjct: 104 RYRGREMAHQDIGIKLLEKVKTDVAEFAKVEQDARFEGRQVVMVLAP 150
>gi|395778940|ref|ZP_10459451.1| translation initiation factor IF-3 [Bartonella elizabethae
Re6043vi]
gi|423714788|ref|ZP_17689012.1| translation initiation factor IF-3 [Bartonella elizabethae F9251]
gi|395417115|gb|EJF83467.1| translation initiation factor IF-3 [Bartonella elizabethae
Re6043vi]
gi|395431007|gb|EJF97035.1| translation initiation factor IF-3 [Bartonella elizabethae F9251]
Length = 172
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 65/108 (60%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y+ QKK +KK +++KE+KM N+D HDY V+L+A +F+ GDKVK+
Sbjct: 66 LGKLKYQTQKKAAETRKKQKV--IEIKEIKMRPNVDVHDYGVKLRAVHRFIDHGDKVKIT 123
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE +++ ++L++R + D E+A E R I +++ P
Sbjct: 124 LRFRGREMAHQDLGLKLLQRVKEDTSEIAKIELEPKLEGRQIMMVIAP 171
>gi|296283260|ref|ZP_06861258.1| translation initiation factor IF-3 [Citromicrobium bathyomarinum
JL354]
Length = 113
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 66/111 (59%), Gaps = 3/111 (2%)
Query: 5 YFFLSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKV 64
+ + K+RYE QKK +K D+KE+KM NID HDY V+++ KF+++GDKV
Sbjct: 4 FLDVGKHRYEAQKKANLARKTQKTQ--DIKEVKMRPNIDTHDYDVKMRNVVKFIENGDKV 61
Query: 65 KVIVNLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVP 114
K + +GRE + + ++L+ R ++DV E+A E+ R + ++L P
Sbjct: 62 KCTLRFRGREMAHQQLGMDLLNRVRDDVEEIAKVESFPRLEGRQMLMVLAP 112
>gi|422302475|ref|ZP_16389838.1| Translation initiation factor IF-3 [Microcystis aeruginosa PCC
9806]
gi|389788347|emb|CCI16128.1| Translation initiation factor IF-3 [Microcystis aeruginosa PCC
9806]
Length = 176
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 72/109 (66%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY++EQ+KK + +KK + D+KE+KM Y ID+HDY+VR+ A++FLK GDKVK +
Sbjct: 70 GKYKFEQEKKAREAKKKQ--HTADIKEVKMRYKIDEHDYNVRVNQAQRFLKAGDKVKATI 127
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + N+A EL+ R D+ ++A + ++ RN+ ++L P K
Sbjct: 128 TFRGREIQHSNLAEELLARMAKDLEDVAEVQQAPKKEGRNMMMMLSPKK 176
>gi|238927111|ref|ZP_04658871.1| translation initiation factor IF3 [Selenomonas flueggei ATCC 43531]
gi|238885091|gb|EEQ48729.1| translation initiation factor IF3 [Selenomonas flueggei ATCC 43531]
Length = 188
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 74/124 (59%), Gaps = 3/124 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+RYEQQK++K +KK + +KE+K+ NID+HD++V+LK A +F ++G+KVKV +
Sbjct: 59 GKFRYEQQKREKEAKKKQKT--ISIKEVKLRPNIDEHDFNVKLKNALRFAEEGNKVKVTI 116
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKALLQKAQEPPK 127
+GRE + ++ R +G+L S E +N+ +IL P K +P K
Sbjct: 117 MFRGRELSHPELGRAVLDRVSERLGDLVSIERGAKLEGKNMTMILSPKVQKPAKTAKPAK 176
Query: 128 KKDK 131
++DK
Sbjct: 177 QEDK 180
>gi|72383053|ref|YP_292408.1| translation initiation factor IF-3 [Prochlorococcus marinus str.
NATL2A]
gi|123759845|sp|Q46IH3.1|IF3_PROMT RecName: Full=Translation initiation factor IF-3
gi|72002903|gb|AAZ58705.1| bacterial translation initiation factor 3 (bIF-3) [Prochlorococcus
marinus str. NATL2A]
Length = 202
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/117 (43%), Positives = 74/117 (63%), Gaps = 4/117 (3%)
Query: 10 KYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVN 69
K+++EQ+KK K +KKS ++ ++KE+KM Y IDQHDY VR+ A +FLK GDKVK V
Sbjct: 76 KFKFEQEKKAKEAKKKS--HQTEVKEVKMRYKIDQHDYQVRISQATRFLKAGDKVKCTVI 133
Query: 70 LKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNKA-LLQKAQE 124
+GRE + +A L++R D+ E A + R+ RN+ + L P K LL+K E
Sbjct: 134 FRGREIQHTALAETLLKRMAKDLEEKAEVQQSPKREGRNMIMFLTPRKTPLLKKESE 190
>gi|425471192|ref|ZP_18850052.1| Translation initiation factor IF-3 [Microcystis aeruginosa PCC
9701]
gi|389882981|emb|CCI36615.1| Translation initiation factor IF-3 [Microcystis aeruginosa PCC
9701]
Length = 176
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 72/109 (66%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY++EQ+KK + +KK + D+KE+KM Y ID+HDY+VR+ A++FLK GDKVK +
Sbjct: 70 GKYKFEQEKKAREAKKKQ--HTADIKEVKMRYKIDEHDYNVRVNQAQRFLKAGDKVKATI 127
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + N+A EL+ R D+ ++A + ++ RN+ ++L P K
Sbjct: 128 TFRGREIQHSNLAEELLARMAKDLEDVAEVQQAPKKEGRNMMMMLSPKK 176
>gi|425439412|ref|ZP_18819737.1| Translation initiation factor IF-3 [Microcystis aeruginosa PCC
9717]
gi|389720374|emb|CCH95925.1| Translation initiation factor IF-3 [Microcystis aeruginosa PCC
9717]
Length = 176
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 72/109 (66%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY++EQ+KK + +KK + D+KE+KM Y ID+HDY+VR+ A++FLK GDKVK +
Sbjct: 70 GKYKFEQEKKAREAKKKQ--HTADIKEVKMRYKIDEHDYNVRVNQAQRFLKAGDKVKATI 127
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + N+A EL+ R D+ ++A + ++ RN+ ++L P K
Sbjct: 128 TFRGREIQHSNLAEELLARMAKDLQDVAEVQQAPKKEGRNMMMMLSPKK 176
>gi|395782206|ref|ZP_10462610.1| translation initiation factor IF-3 [Bartonella rattimassiliensis
15908]
gi|395419145|gb|EJF85446.1| translation initiation factor IF-3 [Bartonella rattimassiliensis
15908]
Length = 172
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 65/108 (60%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y+ QKK +KK +++KE+KM N+D HDY V+LKA +F+ GDKVK+
Sbjct: 66 LGKLKYQTQKKASETRKKQKV--IEIKEIKMRPNVDVHDYGVKLKAVHRFIDHGDKVKIT 123
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE +++ ++L++R + D E+A E R + +++ P
Sbjct: 124 LRFRGREMAHQDLGLKLLQRVKEDTSEIAKIELEPKLEGRQMMMVIAP 171
>gi|16329482|ref|NP_440210.1| translation initiation factor IF-3 [Synechocystis sp. PCC 6803]
gi|383321223|ref|YP_005382076.1| translation initiation factor IF-3 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383324393|ref|YP_005385246.1| translation initiation factor IF-3 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383490277|ref|YP_005407953.1| translation initiation factor IF-3 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384435543|ref|YP_005650267.1| translation initiation factor IF-3 [Synechocystis sp. PCC 6803]
gi|451813641|ref|YP_007450093.1| initiation factor IF-3 [Synechocystis sp. PCC 6803]
gi|2497285|sp|P72874.1|IF3_SYNY3 RecName: Full=Translation initiation factor IF-3
gi|1651964|dbj|BAA16890.1| initiation factor IF-3 [Synechocystis sp. PCC 6803]
gi|339272575|dbj|BAK49062.1| Translation initiation factor IF-3 [Synechocystis sp. PCC 6803]
gi|359270542|dbj|BAL28061.1| translation initiation factor IF-3 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359273713|dbj|BAL31231.1| translation initiation factor IF-3 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359276883|dbj|BAL34400.1| translation initiation factor IF-3 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|407957361|dbj|BAM50601.1| translation initiation factor IF-3 [Synechocystis sp. PCC 6803]
gi|451779610|gb|AGF50579.1| initiation factor IF-3 [Synechocystis sp. PCC 6803]
Length = 177
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 69/109 (63%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY++EQ+KK + +KK + D+KE+KM Y ID+HDY VR+ A++FLK GDKVK V
Sbjct: 70 GKYKFEQEKKAREAKKKQ--HTADVKEVKMRYKIDEHDYQVRINQAKRFLKAGDKVKATV 127
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
N +GRE + ++A EL+ R D+ A + R+ RN+ + L P K
Sbjct: 128 NFRGREIQHAHLAKELLDRMATDLATEADIQQAPKREGRNMMMFLSPKK 176
>gi|255659699|ref|ZP_05405108.1| translation initiation factor IF-3 [Mitsuokella multacida DSM
20544]
gi|260848273|gb|EEX68280.1| translation initiation factor IF-3 [Mitsuokella multacida DSM
20544]
Length = 174
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 68/107 (63%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYRYEQQK++K +KK +++KE+K+ NI+QHD+ V+LK A +F+++G+KVKV +
Sbjct: 46 GKYRYEQQKREKEAKKKQKV--INIKEVKLRPNIEQHDFDVKLKNALRFVEEGNKVKVTI 103
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE + E++ R +G+ S E N +N+ +I+ P
Sbjct: 104 MFRGRELSHPELGKEVLSRVAAALGDAVSIERNAKLEGKNMTMIVAP 150
>gi|269798229|ref|YP_003312129.1| translation initiation factor IF-3 [Veillonella parvula DSM 2008]
gi|269094858|gb|ACZ24849.1| translation initiation factor IF-3 [Veillonella parvula DSM 2008]
Length = 182
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 68/106 (64%), Gaps = 3/106 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYRYEQQK++K +KK + LKE+K+ +I+ HD+ V++K A KFL +G+KVKV +
Sbjct: 77 GKYRYEQQKREKEAKKKQKI--VTLKEVKLRPHIEDHDFYVKMKNASKFLAEGNKVKVTI 134
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILV 113
+GRE + + ++ RF +++ E AS E+ RN+ +ILV
Sbjct: 135 MFRGRELSHPELGMAVLTRFADELKETASIEKAAKLEGRNMTMILV 180
>gi|307942620|ref|ZP_07657968.1| translation initiation factor IF-3 [Roseibium sp. TrichSKD4]
gi|307774259|gb|EFO33472.1| translation initiation factor IF-3 [Roseibium sp. TrichSKD4]
Length = 154
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
+Y+Y+ QKK +KK +++KE+KM NID HDY V++K +F DGDKVKV +
Sbjct: 48 GRYKYQAQKKAAEARKKQKT--VEIKEIKMRPNIDTHDYEVKMKNMLRFFNDGDKVKVTL 105
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNK 116
+GRE +++ ++L+ + + + E+A E N R + ++L P K
Sbjct: 106 RFRGREMAHQDLGVKLLHKVREETAEIAKVESNPKLEGRQMVMVLAPLK 154
>gi|261408924|ref|YP_003245165.1| translation initiation factor IF-3 [Paenibacillus sp. Y412MC10]
gi|329922246|ref|ZP_08277948.1| translation initiation factor IF-3 [Paenibacillus sp. HGF5]
gi|261285387|gb|ACX67358.1| translation initiation factor IF-3 [Paenibacillus sp. Y412MC10]
gi|328942283|gb|EGG38553.1| translation initiation factor IF-3 [Paenibacillus sp. HGF5]
Length = 164
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+RYEQQKK+K +K +D+KE+ NI++HDY +L+ KFLKDGDKVK V
Sbjct: 58 GKFRYEQQKKEKEARKNQKI--VDIKEVWFRANIEEHDYQTKLRNVVKFLKDGDKVKCSV 115
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE NI +++ R + +V +L E R++ +IL P
Sbjct: 116 RFRGREITHANIGQKILERVKTEVADLCVIERQPKLEGRSMIMILAP 162
>gi|260424667|ref|ZP_05732874.2| translation initiation factor IF-3 [Dialister invisus DSM 15470]
gi|260402756|gb|EEW96303.1| translation initiation factor IF-3 [Dialister invisus DSM 15470]
Length = 172
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYRYEQQK+ K +KK LKE+K+ NI+ HD+ V+LK A++FL DG+KVKV +
Sbjct: 66 GKYRYEQQKRDKEAKKKQKV--FQLKEVKLRPNIEDHDFYVKLKNAQRFLADGNKVKVTI 123
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGE-LASEENKNFRDRNIFIILVP 114
+GRE + E++ RF ++G+ + E+ RN+ +++ P
Sbjct: 124 MFRGREMTHPELGGEVLERFAKELGDSIVREKPPKLEGRNMTMVVGP 170
>gi|340028954|ref|ZP_08665017.1| translation initiation factor IF-3 [Paracoccus sp. TRP]
Length = 140
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K++YEQQK++ +KK +D+KE+K D HDY V++++ KFL +GDKVK+
Sbjct: 34 LGKFKYEQQKREAEARKKQ--KTIDIKEIKFRPGTDTHDYDVKMRSVMKFLAEGDKVKIT 91
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVP 114
+ +GRE + I +EL+ R VGE E+ R + +++ P
Sbjct: 92 LRFRGREMAHQQIGLELLNRIAAHVGEAGKVESMPKLEGRQMVMMISP 139
>gi|87200551|ref|YP_497808.1| translation initiation factor IF-3 [Novosphingobium aromaticivorans
DSM 12444]
gi|87136232|gb|ABD26974.1| bacterial translation initiation factor 3 (bIF-3) [Novosphingobium
aromaticivorans DSM 12444]
Length = 173
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 64/111 (57%), Gaps = 3/111 (2%)
Query: 5 YFFLSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKV 64
+ + K+RYE QKK +K ++KE+KM NID HDY +++ KF+ +GDKV
Sbjct: 64 FLDVGKFRYEAQKKANLARKSQKTQ--EIKEIKMRPNIDDHDYETKMRNVVKFIGEGDKV 121
Query: 65 KVIVNLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVP 114
K+ + +GRE + + + L+R+ Q+DV E+A E R + ++L P
Sbjct: 122 KITLRFRGRELSHQQLGMNLLRKVQDDVAEIAKVEAFPRMEGRQMLMVLAP 172
>gi|27375821|ref|NP_767350.1| translation initiation factor IF-3 [Bradyrhizobium japonicum USDA
110]
gi|39931279|sp|Q89WH7.1|IF3_BRAJA RecName: Full=Translation initiation factor IF-3
gi|27348959|dbj|BAC45975.1| translation initiation factor IF-3 [Bradyrhizobium japonicum USDA
110]
Length = 179
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+Y QKK +K+ +++KE+K+ ID HDY V+++A ++F ++GDKVK+ +
Sbjct: 74 GKYKYSAQKKAAEARKRQKT--VEIKEIKLRPMIDDHDYDVKMRAMQRFFEEGDKVKITL 131
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE + I +L+ + + DV ELA E++ F R + ++L P
Sbjct: 132 RYRGREMAHQEIGTKLLDKIKTDVAELAKVEQDARFEGRQVVMVLAP 178
>gi|443320201|ref|ZP_21049318.1| translation initiation factor IF-3 [Gloeocapsa sp. PCC 73106]
gi|442790083|gb|ELR99699.1| translation initiation factor IF-3 [Gloeocapsa sp. PCC 73106]
Length = 176
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 70/109 (64%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY++EQ+KK + +KK + D+KE+KM Y ID HDY VR+++A +FLK GDKVK +
Sbjct: 70 GKYKFEQEKKAREAKKKQHTS--DVKEVKMRYKIDDHDYQVRVRSAERFLKSGDKVKATI 127
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
KGRE + ++A +L+ R D+ E A + ++ RN+ ++L P K
Sbjct: 128 TFKGREIQHADLAEDLLNRMAKDLQEFAEVQQAPKKEGRNMMMMLSPKK 176
>gi|381211880|ref|ZP_09918951.1| translation initiation factor IF-3 [Lentibacillus sp. Grbi]
Length = 167
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 67/107 (62%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYRYEQQKK+K +KK +++KE++ I +HD++ +LK ARKFL GDKVK V
Sbjct: 59 GKYRYEQQKKEKEARKKQKV--INVKEVRFTPGIGEHDFNTKLKNARKFLSKGDKVKASV 116
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVP 114
+GR +++ E++ R + ++A+ E+K RN+F++L P
Sbjct: 117 RFRGRAITHKDLGREVLDRLAEETNDVATIESKAKMEGRNMFMMLAP 163
>gi|340777242|ref|ZP_08697185.1| translation initiation factor IF-3 [Acetobacter aceti NBRC 14818]
Length = 144
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 71/107 (66%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YEQQKK+ +KK +++KE+K+ NID++DY V++++ + F+ DGDKVKV +
Sbjct: 39 GKYKYEQQKKRNEARKKQKV--IEIKEVKVRPNIDENDYQVKMRSMKSFIGDGDKVKVTL 96
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE +++ ++++ R +N++ E A E+ +R + ++L P
Sbjct: 97 RFRGREMAHQDLGVKVLERIRNEMEEEAKVEQMPRLENRQMVMVLAP 143
>gi|49473727|ref|YP_031769.1| translation initiation factor IF-3 [Bartonella quintana str.
Toulouse]
gi|403529974|ref|YP_006664503.1| translation initiation factor IF-3 [Bartonella quintana RM-11]
gi|61213108|sp|Q6G1I3.1|IF3_BARQU RecName: Full=Translation initiation factor IF-3
gi|49239230|emb|CAF25550.1| Translation initiation factor IF-3 [Bartonella quintana str.
Toulouse]
gi|403232046|gb|AFR25789.1| translation initiation factor IF-3 [Bartonella quintana RM-11]
Length = 172
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 66/108 (61%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y+ QKK +KK +++KE+KM N+D HDY V+LKA +F+ +GDKVK+
Sbjct: 66 LGKLKYQTQKKAAEIRKKQKV--IEIKEIKMRPNVDVHDYEVKLKAIHRFIGNGDKVKIT 123
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE +++ ++L++R + D E+A E R + +++ P
Sbjct: 124 LRFRGREMAHQDLGLKLLQRVKEDTSEIAKIEAEPKLEGRQMMMVIAP 171
>gi|332798665|ref|YP_004460164.1| Translation initiation factor IF-3 [Tepidanaerobacter acetatoxydans
Re1]
gi|332696400|gb|AEE90857.1| Translation initiation factor IF-3 [Tepidanaerobacter acetatoxydans
Re1]
Length = 189
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 66/110 (60%), Gaps = 3/110 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YEQ K++K +KK +++KE++M ID+HD+ VRLK KFLKDGDKVKV +
Sbjct: 78 GKYKYEQSKREKEARKKQKV--INVKEIRMNPTIDEHDFQVRLKNTIKFLKDGDKVKVSI 135
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILVPNKA 117
+GR+ + E++ R ++ E+ E+ RN+ +++ P +
Sbjct: 136 RFRGRQMTHTKLGEEVLNRVVENISEVGVVEKPPKMEGRNMVMVIAPKQT 185
>gi|443327817|ref|ZP_21056425.1| translation initiation factor IF-3 [Xenococcus sp. PCC 7305]
gi|442792546|gb|ELS02025.1| translation initiation factor IF-3 [Xenococcus sp. PCC 7305]
Length = 177
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 72/109 (66%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YE+ KK ++ K + D+KE+KM Y I++HDY VR+K A++FL+ GDKVK +
Sbjct: 71 GKYKYERDKKL--KEAKKKQHNADVKEVKMRYKIEEHDYQVRVKNAQRFLQSGDKVKATI 128
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+ +GRE + N+A++L++R D+ + + + R+ RNI +++ P K
Sbjct: 129 SFRGREIQHSNLAMDLLKRMAADLEDFGEVQQRPKREGRNIMMMISPKK 177
>gi|398826447|ref|ZP_10584691.1| translation initiation factor IF-3 [Bradyrhizobium sp. YR681]
gi|398221085|gb|EJN07513.1| translation initiation factor IF-3 [Bradyrhizobium sp. YR681]
Length = 201
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+Y QKK +K+ +++KE+K+ ID HDY V+++A ++F ++GDKVK+ +
Sbjct: 96 GKYKYSAQKKAAEARKRQKT--VEIKEIKLRPMIDDHDYDVKMRAMQRFFEEGDKVKITL 153
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE + I +L+ + + DV ELA E++ F R + ++L P
Sbjct: 154 RYRGREMAHQEIGTKLLDKIKTDVAELAKVEQDARFEGRQVVMVLAP 200
>gi|317121665|ref|YP_004101668.1| translation initiation factor 3 (bIF-3) [Thermaerobacter
marianensis DSM 12885]
gi|315591645|gb|ADU50941.1| bacterial translation initiation factor 3 (bIF-3) [Thermaerobacter
marianensis DSM 12885]
Length = 196
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 73/122 (59%), Gaps = 3/122 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YEQ K+ + +++ +D+KE+KM IDQHD+ V+L+ AR+FL+DGDKVK +
Sbjct: 57 GKYKYEQAKRDREARRRQKI--VDIKEVKMRPRIDQHDFEVKLRNARRFLEDGDKVKATI 114
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNKALLQKAQEPPK 127
+GRE ++ +++ R V ++A+ E + + RN+ ++L P + + P+
Sbjct: 115 MFRGREIVHADLGRQVLERLAKAVEDIATVERRPVVEGRNMTMVLAPRPQAAARPEPRPE 174
Query: 128 KK 129
+
Sbjct: 175 AR 176
>gi|157414243|ref|YP_001485109.1| translation initiation factor IF-3 [Prochlorococcus marinus str.
MIT 9215]
gi|254525365|ref|ZP_05137417.1| translation initiation factor IF-3 [Prochlorococcus marinus str.
MIT 9202]
gi|166918493|sp|A8G7E2.1|IF3_PROM2 RecName: Full=Translation initiation factor IF-3
gi|157388818|gb|ABV51523.1| Translation Initiation factor 3 [Prochlorococcus marinus str. MIT
9215]
gi|221536789|gb|EEE39242.1| translation initiation factor IF-3 [Prochlorococcus marinus str.
MIT 9202]
Length = 190
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 74/114 (64%), Gaps = 3/114 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY++EQ+KK K +KKS ++ ++KE+KM Y ID+HDY VR+ A KFLK GDKVK V
Sbjct: 75 GKYKFEQEKKAKEARKKS--HQTEVKEVKMRYKIDKHDYDVRIGQATKFLKSGDKVKCTV 132
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNKALLQK 121
+GRE + N+A L+ + +D+ E + + K R+ RN+ + L P K+ L K
Sbjct: 133 IFRGREIQHSNLAETLLLKMASDLEEQSEVQQKPKREGRNMIMFLSPRKSPLIK 186
>gi|294792090|ref|ZP_06757238.1| translation initiation factor IF-3 [Veillonella sp. 6_1_27]
gi|294457320|gb|EFG25682.1| translation initiation factor IF-3 [Veillonella sp. 6_1_27]
Length = 172
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 68/106 (64%), Gaps = 3/106 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYRYEQQK++K +KK + LKE+K+ +I+ HD+ V++K A KFL +G+KVKV +
Sbjct: 67 GKYRYEQQKREKEAKKKQKI--VTLKEVKLRPHIEDHDFYVKMKNASKFLAEGNKVKVTI 124
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILV 113
+GRE + + ++ RF +++ E AS E+ RN+ +ILV
Sbjct: 125 MFRGRELSHPELGMAVLTRFADELKETASIEKAAKLEGRNMTMILV 170
>gi|421595748|ref|ZP_16039723.1| translation initiation factor IF-3 [Bradyrhizobium sp. CCGE-LA001]
gi|404272142|gb|EJZ35847.1| translation initiation factor IF-3 [Bradyrhizobium sp. CCGE-LA001]
Length = 201
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+Y QKK +K+ +++KE+K+ ID HDY V+++A ++F ++GDKVK+ +
Sbjct: 96 GKYKYSAQKKAAEARKRQKT--VEIKEIKLRPMIDDHDYDVKMRAMQRFFEEGDKVKITL 153
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE + I +L+ + + DV ELA E++ F R + ++L P
Sbjct: 154 RYRGREMAHQEIGTKLLDKIKTDVAELAKVEQDARFEGRQVVMVLAP 200
>gi|138896279|ref|YP_001126732.1| translation initiation factor IF3 [Geobacillus thermodenitrificans
NG80-2]
gi|134267792|gb|ABO67987.1| Translation initiation factor IF3 [Geobacillus thermodenitrificans
NG80-2]
Length = 130
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+EQQKK+K +KK +++KE+++ I++HD++ +L+ ARKFL+ GDKVK +
Sbjct: 21 GKFRFEQQKKEKEARKKQKV--INIKEVRLSPTIEEHDFNTKLRNARKFLEKGDKVKATI 78
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILVP 114
KGR + I ++ RF ++A E RN+F++L P
Sbjct: 79 RFKGRAITHKEIGQRVLDRFSEACADIAVVETAPKLEGRNMFLVLAP 125
>gi|348026273|ref|YP_004766078.1| translation initiation factor IF-3 [Megasphaera elsdenii DSM 20460]
gi|341822327|emb|CCC73251.1| translation initiation factor IF-3 [Megasphaera elsdenii DSM 20460]
Length = 153
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 69/109 (63%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYRYEQQK++K +KK + LKE+K+ NI+ HD+ V++KAA++FL +G KVKV +
Sbjct: 46 GKYRYEQQKREKEAKKKQKV--LTLKEVKLRPNIEDHDFYVKMKAAQRFLGEGSKVKVTI 103
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNK 116
+GRE + +L+ RF +++ + A E+ RN+ +++ NK
Sbjct: 104 MFRGREMSHPELGRDLLVRFADELKDTAHVEKEPKIEGRNMTMVIAVNK 152
>gi|239827996|ref|YP_002950620.1| translation initiation factor IF-3 [Geobacillus sp. WCH70]
gi|239808289|gb|ACS25354.1| translation initiation factor IF-3 [Geobacillus sp. WCH70]
Length = 190
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+EQQKK+K +KK +++KE+++ I++HD++ +L+ ARKFL+ GDKVK +
Sbjct: 82 GKFRFEQQKKEKEARKKQKV--INVKEVRLSPTIEEHDFNTKLRNARKFLEKGDKVKATI 139
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I ++ RF ++A E D RN+F++L P
Sbjct: 140 RFKGRAITHKEIGQRVLERFSEACSDIAVVETAPKMDGRNMFLVLAP 186
>gi|332711009|ref|ZP_08430945.1| bacterial translation initiation factor 3 [Moorea producens 3L]
gi|332350323|gb|EGJ29927.1| bacterial translation initiation factor 3 [Moorea producens 3L]
Length = 176
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 69/109 (63%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY++EQ+KK + +KK + D+KE+KM Y I+ HDY+VR+ A +FLK GDKVK +
Sbjct: 70 GKYKFEQEKKAREAKKKQ--HTADVKEVKMRYKIEDHDYNVRVNQAERFLKSGDKVKATI 127
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + N+A L+ R D+ ELA + R+ RN+ ++L P K
Sbjct: 128 TFRGREIQHSNLAQALLERMAKDLQELAEVQQAPKREGRNMMMLLSPKK 176
>gi|56421253|ref|YP_148571.1| translation initiation factor IF-3 [Geobacillus kaustophilus
HTA426]
gi|56381095|dbj|BAD77003.1| translation initiation factor IF-3 [Geobacillus kaustophilus
HTA426]
Length = 239
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+EQQKK+K +KK +++KE+++ I++HD++ +L+ ARKFL+ GDKVK +
Sbjct: 130 GKFRFEQQKKEKEARKKQKV--INVKEVRLSPTIEEHDFNTKLRNARKFLEKGDKVKATI 187
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I ++ RF ++A E D RN+F++L P
Sbjct: 188 RFKGRAITHKEIGQRVLDRFSEACADIAVVETAPKMDGRNMFLVLAP 234
>gi|381184391|ref|ZP_09893012.1| translation initiation factor IF-3 [Listeriaceae bacterium TTU
M1-001]
gi|380315721|gb|EIA19219.1| translation initiation factor IF-3 [Listeriaceae bacterium TTU
M1-001]
Length = 166
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 69/107 (64%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+EQQKK+K +K + LKE+++ ID+HD++ +L+ ARKFL+ GDKVK +
Sbjct: 58 GKFRFEQQKKEKEARKNQKV--IVLKEVRLSPTIDEHDFNTKLRNARKFLEKGDKVKCSI 115
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I +++ RF ++ +L++ E K D R++F++L P
Sbjct: 116 RFKGRAITHKEIGQKVLDRFADECKDLSTVEQKAKMDGRSMFLVLAP 162
>gi|357386713|ref|YP_004901437.1| translation initiation factor 3 [Pelagibacterium halotolerans B2]
gi|351595350|gb|AEQ53687.1| translation initiation factor 3 [Pelagibacterium halotolerans B2]
Length = 171
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 65/108 (60%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K++Y QKK +KK +++KE+K+ NID HDY V+++A KF+ +GDKVKV
Sbjct: 65 LGKFKYAAQKKAAEARKKQKV--IEVKEIKLRPNIDTHDYDVKMRALEKFIGEGDKVKVT 122
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE +NI +EL+ + ++ E+ E N R + ++L P
Sbjct: 123 MRFRGREMAHQNIGLELLHKVKDQFEEITKVESNPRAEGRQMVMVLAP 170
>gi|330994119|ref|ZP_08318047.1| Translation initiation factor IF-3 [Gluconacetobacter sp. SXCC-1]
gi|329758586|gb|EGG75102.1| Translation initiation factor IF-3 [Gluconacetobacter sp. SXCC-1]
Length = 193
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 71/107 (66%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YEQQKK+ +KK +++KE+K+ NID++DY V+++A + F+ +GDKVKV +
Sbjct: 88 GKFKYEQQKKRNEARKKQKV--IEIKEVKVRPNIDENDYQVKMRAMKSFIGEGDKVKVTL 145
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVP 114
+GRE +++ ++++ R + ++ ELA E+ +R + ++L P
Sbjct: 146 RFRGREMAHQDLGVKVLERIRTEMDELAKVEHMPKLENRQMIMVLAP 192
>gi|294793960|ref|ZP_06759097.1| translation initiation factor IF-3 [Veillonella sp. 3_1_44]
gi|294455530|gb|EFG23902.1| translation initiation factor IF-3 [Veillonella sp. 3_1_44]
Length = 172
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 67/106 (63%), Gaps = 3/106 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYRYEQQK++K +KK + LKE+K+ +I+ HD+ V++K A KFL +G+KVKV +
Sbjct: 67 GKYRYEQQKREKEAKKKQKI--VTLKEVKLRPHIENHDFYVKMKNASKFLAEGNKVKVTI 124
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILV 113
+GRE + + ++ RF ++ E AS E+ RN+ +ILV
Sbjct: 125 MFRGRELSHPELGMAVLTRFAEELKETASIEKAAKLEGRNMTMILV 170
>gi|374571785|ref|ZP_09644881.1| translation initiation factor IF-3 [Bradyrhizobium sp. WSM471]
gi|386399399|ref|ZP_10084177.1| translation initiation factor IF-3 [Bradyrhizobium sp. WSM1253]
gi|374420106|gb|EHQ99638.1| translation initiation factor IF-3 [Bradyrhizobium sp. WSM471]
gi|385740025|gb|EIG60221.1| translation initiation factor IF-3 [Bradyrhizobium sp. WSM1253]
Length = 200
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+Y QKK +K+ +++KE+K+ ID HDY V+++A ++F ++GDKVK+ +
Sbjct: 95 GKYKYSAQKKAAEARKRQKI--VEIKEIKLRPMIDDHDYEVKMRAMQRFFEEGDKVKITL 152
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE + I +L+ + + DV ELA E++ F R + ++L P
Sbjct: 153 RYRGREMAHQEIGTKLLDKIKTDVAELAKVEQDARFEGRQVVMVLAP 199
>gi|220930059|ref|YP_002506968.1| translation initiation factor IF-3 [Clostridium cellulolyticum H10]
gi|220000387|gb|ACL76988.1| translation initiation factor IF-3 [Clostridium cellulolyticum H10]
Length = 176
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 70/109 (64%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SKY +EQ KK+K +K + LKE+++ I++HD+ V++K+A KFLKDGDKVKV +
Sbjct: 69 SKYVFEQGKKEKEAKKNQKV--VSLKEVRLSAKIEEHDFDVKVKSAYKFLKDGDKVKVSI 126
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILVPNK 116
+GRE ++ + +++ +F + V E+ +E +++ IIL PNK
Sbjct: 127 KFRGREMKYTSDGKDVLEKFTSVVSEVGVAERQPKLEGKSMIIILNPNK 175
>gi|218245669|ref|YP_002371040.1| translation initiation factor IF-3 [Cyanothece sp. PCC 8801]
gi|257058715|ref|YP_003136603.1| translation initiation factor IF-3 [Cyanothece sp. PCC 8802]
gi|226707355|sp|B7JYL4.1|IF3_CYAP8 RecName: Full=Translation initiation factor IF-3
gi|218166147|gb|ACK64884.1| translation initiation factor IF-3 [Cyanothece sp. PCC 8801]
gi|256588881|gb|ACU99767.1| translation initiation factor IF-3 [Cyanothece sp. PCC 8802]
Length = 176
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY++EQ+KK + + K + D+KE+KM Y I + DY+VR+ A++FLK GDKVK V
Sbjct: 70 GKYKFEQEKKAR--EAKKKQHTADVKEVKMRYKIGESDYNVRVNQAKRFLKSGDKVKATV 127
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + N+A EL+ R D+ ELA + R+ RN+ + L P K
Sbjct: 128 TFRGREIQHANLAQELLERMAKDLEELAEIQQAPKREGRNMMMFLTPKK 176
>gi|261418267|ref|YP_003251949.1| translation initiation factor IF-3 [Geobacillus sp. Y412MC61]
gi|297529121|ref|YP_003670396.1| translation initiation factor IF-3 [Geobacillus sp. C56-T3]
gi|319767773|ref|YP_004133274.1| translation initiation factor IF-3 [Geobacillus sp. Y412MC52]
gi|375009831|ref|YP_004983464.1| translation initiation factor IF-3 [Geobacillus thermoleovorans
CCB_US3_UF5]
gi|448239004|ref|YP_007403062.1| translation initiation factor IF-3 [Geobacillus sp. GHH01]
gi|261374724|gb|ACX77467.1| translation initiation factor IF-3 [Geobacillus sp. Y412MC61]
gi|297252373|gb|ADI25819.1| translation initiation factor IF-3 [Geobacillus sp. C56-T3]
gi|317112639|gb|ADU95131.1| translation initiation factor IF-3 [Geobacillus sp. Y412MC52]
gi|359288680|gb|AEV20364.1| Translation initiation factor IF-3 [Geobacillus thermoleovorans
CCB_US3_UF5]
gi|445207846|gb|AGE23311.1| translation initiation factor IF-3 [Geobacillus sp. GHH01]
Length = 202
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+EQQKK+K +KK +++KE+++ I++HD++ +L+ ARKFL+ GDKVK +
Sbjct: 93 GKFRFEQQKKEKEARKKQKV--INVKEVRLSPTIEEHDFNTKLRNARKFLEKGDKVKATI 150
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I ++ RF ++A E D RN+F++L P
Sbjct: 151 RFKGRAITHKEIGQRVLDRFSEACADIAVVETAPKMDGRNMFLVLAP 197
>gi|260434416|ref|ZP_05788386.1| translation initiation factor IF-3 [Synechococcus sp. WH 8109]
gi|260412290|gb|EEX05586.1| translation initiation factor IF-3 [Synechococcus sp. WH 8109]
Length = 217
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 73/117 (62%), Gaps = 3/117 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+++EQ+KK K +KKS ++ ++KE+KM Y IDQHDY VR+ A++FLK GDKVK V
Sbjct: 75 GKFKFEQEKKAKEAKKKS--HQTEVKEVKMRYKIDQHDYDVRIGQAQRFLKAGDKVKCTV 132
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNKALLQKAQE 124
+G E + +A L+RR D+ E A + R+ RN+ + L P K L K +E
Sbjct: 133 IFRGLEIQHTALAETLLRRMAKDLEEKAEIQQAPKREGRNMIMFLTPRKTPLVKKEE 189
>gi|121601938|ref|YP_989588.1| translation initiation factor IF-3 [Bartonella bacilliformis KC583]
gi|421761386|ref|ZP_16198189.1| translation initiation factor IF-3 [Bartonella bacilliformis INS]
gi|166198949|sp|A1UUD5.1|IF3_BARBK RecName: Full=Translation initiation factor IF-3
gi|120614115|gb|ABM44716.1| translation initiation factor IF-3 [Bartonella bacilliformis KC583]
gi|411173170|gb|EKS43218.1| translation initiation factor IF-3 [Bartonella bacilliformis INS]
Length = 173
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 67/108 (62%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y+ QKK +KK +++KE+K+ N+D HDY V+LKA +F++ G+KVK+
Sbjct: 66 LGKLKYQNQKKAAETRKKQKI--IEIKEIKLRPNVDVHDYGVKLKAIHRFIEHGNKVKIT 123
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE +++ ++L+ R + DV E+A E +R + +++ P
Sbjct: 124 LRFRGREMAHQDLGVKLLERMKEDVSEIAKIESEPKLENRQMMMVIAP 171
>gi|303229418|ref|ZP_07316208.1| translation initiation factor IF-3 [Veillonella atypica
ACS-134-V-Col7a]
gi|302515954|gb|EFL57906.1| translation initiation factor IF-3 [Veillonella atypica
ACS-134-V-Col7a]
Length = 182
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 67/106 (63%), Gaps = 3/106 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYRYEQQK++K +KK + LKE+K+ +I+ HD+ V++K A KFL +G+KVKV +
Sbjct: 77 GKYRYEQQKREKEAKKKQKI--VTLKEVKLRPHIEDHDFYVKMKNASKFLGEGNKVKVTI 134
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILV 113
+GRE + + ++ RF ++ E AS E+ RN+ +ILV
Sbjct: 135 MFRGRELSHPELGMAVLTRFAEELKETASIEKAAKLEGRNMTMILV 180
>gi|124021868|ref|YP_001016175.1| translation initiation factor IF-3 [Prochlorococcus marinus str.
MIT 9303]
gi|166198964|sp|A2C600.1|IF3_PROM3 RecName: Full=Translation initiation factor IF-3
gi|123962154|gb|ABM76910.1| Translation Initiation factor 3 [Prochlorococcus marinus str. MIT
9303]
Length = 219
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 72/115 (62%), Gaps = 3/115 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+++EQ+KK K +KKS ++ ++KE+KM Y IDQHDY+VR+ A +FLK GDKVK V
Sbjct: 75 GKFKFEQEKKAKEAKKKS--HQTEVKEVKMRYKIDQHDYNVRIGQAVRFLKAGDKVKCTV 132
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNKALLQKA 122
+GRE + +A L+RR D+ E A + R+ RN+ + L P K L K
Sbjct: 133 IFRGREIQHTALAETLLRRMAKDLEEQAEIQQAPKREGRNMIMFLTPRKTPLIKT 187
>gi|282850467|ref|ZP_06259846.1| translation initiation factor IF-3 [Veillonella parvula ATCC 17745]
gi|282579960|gb|EFB85364.1| translation initiation factor IF-3 [Veillonella parvula ATCC 17745]
Length = 174
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 67/106 (63%), Gaps = 3/106 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYRYEQQK++K +KK + LKE+K+ +I+ HD+ V++K A KFL +G+KVKV +
Sbjct: 69 GKYRYEQQKREKEAKKKQKI--VTLKEVKLRPHIEDHDFYVKMKNASKFLAEGNKVKVTI 126
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILV 113
+GRE + + ++ RF ++ E AS E+ RN+ +ILV
Sbjct: 127 MFRGRELSHPELGMAVLTRFAEELKETASIEKAAKLEGRNMTMILV 172
>gi|289704523|ref|ZP_06500958.1| translation initiation factor IF-3 [Micrococcus luteus SK58]
gi|289558781|gb|EFD52037.1| translation initiation factor IF-3 [Micrococcus luteus SK58]
Length = 408
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 67/106 (63%), Gaps = 3/106 (2%)
Query: 10 KYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVN 69
KY+YE K + + +K+ N + LKE++ ID+HDY + A+KFL GDKVK I+
Sbjct: 141 KYKYEAAVKAR-ESRKNQVNTV-LKEVRFRLKIDKHDYETKTGHAKKFLSQGDKVKAIIQ 198
Query: 70 LKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
+GRE + + I+L+++F DV EL + E++ +D RN+ +++ P
Sbjct: 199 FRGREQQRPELGIKLLQQFAEDVAELGTVESQPRQDGRNMVMVVAP 244
>gi|397904499|ref|ZP_10505409.1| Translation initiation factor 3 [Caloramator australicus RC3]
gi|397162454|emb|CCJ32743.1| Translation initiation factor 3 [Caloramator australicus RC3]
Length = 173
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 59/87 (67%), Gaps = 1/87 (1%)
Query: 31 MDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQN 90
+++KE+++ NID+HD +V+ K A KFLKDGDKVKV V +GRE E ++ E+++RF +
Sbjct: 86 INVKEIRITPNIDEHDLNVKAKNAEKFLKDGDKVKVTVKFRGREAEHSHLGEEVLKRFAD 145
Query: 91 DVGELAS-EENKNFRDRNIFIILVPNK 116
+ E+ E+ +N+F++L P K
Sbjct: 146 KLSEVGVIEKQPKLEGKNMFMVLTPKK 172
>gi|389696691|ref|ZP_10184333.1| translation initiation factor IF-3 [Microvirga sp. WSM3557]
gi|388585497|gb|EIM25792.1| translation initiation factor IF-3 [Microvirga sp. WSM3557]
Length = 173
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 68/107 (63%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+ +QKK +KK +++KE+K+ ID HDY V++KA + F ++G+KVK+ +
Sbjct: 68 GKFRFLEQKKAAEARKKQKT--VEVKEIKLRPGIDDHDYEVKMKAMKGFFEEGNKVKITL 125
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE +++ ++++ R + DVG+LA E NF R + ++L P
Sbjct: 126 RFRGREMAHQSLGLKVLDRVKADVGDLAKVEMEPNFEGRQVVMVLAP 172
>gi|313884895|ref|ZP_07818647.1| translation initiation factor IF-3 [Eremococcus coleocola
ACS-139-V-Col8]
gi|312619586|gb|EFR31023.1| translation initiation factor IF-3 [Eremococcus coleocola
ACS-139-V-Col8]
Length = 175
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 70/108 (64%), Gaps = 3/108 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYR+E QKK+K Q+K +++KE+++ +I++HDY +L+ A KFL+ GDKVKV +
Sbjct: 68 GKYRFELQKKEKEQRKNQKV--VNVKEIRLSPSIEEHDYQTKLRQAIKFLEKGDKVKVSI 125
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVPN 115
+GR +++ +++ F D E+A+ E+K R++F+IL P+
Sbjct: 126 RFRGRAITHKDLGRDVLEDFIEDTAEVATVESKPKMEGRSMFMILAPS 173
>gi|384214401|ref|YP_005605564.1| translation initiation factor IF-3 [Bradyrhizobium japonicum USDA
6]
gi|354953297|dbj|BAL05976.1| translation initiation factor IF-3 [Bradyrhizobium japonicum USDA
6]
Length = 201
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 67/107 (62%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+Y QKK +K+ +++KE+K+ ID HDY V+++A ++F ++GDKVK+ +
Sbjct: 96 GKYKYSAQKKAAEARKRQKI--VEIKEIKLRPMIDDHDYDVKMRAMQRFFEEGDKVKITL 153
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE + I +L+ + ++DV ELA E++ F R + ++L P
Sbjct: 154 RYRGREMAHQEIGTKLLDKIKSDVAELAKVEQDARFEGRQVVMVLAP 200
>gi|428307707|ref|YP_007144532.1| translation initiation factor 3 (bIF-3) [Crinalium epipsammum PCC
9333]
gi|428249242|gb|AFZ15022.1| bacterial translation initiation factor 3 (bIF-3) [Crinalium
epipsammum PCC 9333]
Length = 175
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
Query: 32 DLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQND 91
D+KE+KM Y I++HDY VR+ A +FLK GDKVK + +GRE + ++A EL++R D
Sbjct: 90 DVKEVKMRYKIEEHDYQVRVNQAERFLKAGDKVKATITFRGREIQHSDLAEELLKRMATD 149
Query: 92 VGELASEENKNFRD-RNIFIILVPNK 116
+ E+A + ++ RN+ ++L P K
Sbjct: 150 LQEMAEVQQAPKKEGRNMMMLLSPKK 175
>gi|83594817|ref|YP_428569.1| translation initiation factor 3 [Rhodospirillum rubrum ATCC 11170]
gi|386351582|ref|YP_006049830.1| translation initiation factor 3 [Rhodospirillum rubrum F11]
gi|83577731|gb|ABC24282.1| bacterial translation initiation factor 3 (bIF-3) [Rhodospirillum
rubrum ATCC 11170]
gi|346720018|gb|AEO50033.1| translation initiation factor 3 [Rhodospirillum rubrum F11]
Length = 173
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 73/108 (67%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K++YE QKKK +KK +++KE+K+ NID+HDY V+++AA++FL++GDKVKV
Sbjct: 67 LGKFKYEAQKKKNEAKKKQKV--IEIKEIKLRPNIDEHDYDVKMRAAKRFLEEGDKVKVT 124
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE +++ + +++R DV +LA E++ R + +++ P
Sbjct: 125 MRFRGREMAHQDLGMNVLKRVSEDVADLAKVEQHPKLEGRQMIMVMAP 172
>gi|392383479|ref|YP_005032676.1| translation initiation factor IF-3 [Azospirillum brasilense Sp245]
gi|356878444|emb|CCC99329.1| translation initiation factor IF-3 [Azospirillum brasilense Sp245]
Length = 144
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 70/107 (65%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YE QKK +KK +++KE+K+ NID +DY V++++AR+FL++GDKVKV +
Sbjct: 39 GKYKYEAQKKAAEARKKQKI--IEVKEIKLRPNIDDNDYDVKMRSARRFLEEGDKVKVTM 96
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE +++ + ++ R ++++ ELA E+ R + ++L P
Sbjct: 97 RFRGREMAHQDLGMNVLVRVRDELDELAKVEQMPKLEGRQMVMVLAP 143
>gi|332981194|ref|YP_004462635.1| translation initiation factor 3 (bIF-3) [Mahella australiensis 50-1
BON]
gi|332698872|gb|AEE95813.1| bacterial translation initiation factor 3 (bIF-3) [Mahella
australiensis 50-1 BON]
Length = 167
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YE K++K +K +D+KE+++ I++HD V++K A KFLK+GDKVKV V
Sbjct: 58 GKYKYEAIKQEKEAKKNQRI--IDIKEIRLSTTIEEHDIDVKIKNAIKFLKNGDKVKVTV 115
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GR+ +IA E+++ F V E+ + E+ RN+ +IL P
Sbjct: 116 RFRGRQITHPDIAAEILKNFAEKVAEVGTIEKAPQMDGRNMLMILTP 162
>gi|114707132|ref|ZP_01440030.1| translation initiation factor IF-3 [Fulvimarina pelagi HTCC2506]
gi|114537328|gb|EAU40454.1| translation initiation factor IF-3 [Fulvimarina pelagi HTCC2506]
Length = 217
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +YE QKK +K+ +++KE+KM NID HDY ++KA R+F DGDKVKV
Sbjct: 110 LGKLKYENQKKAAEARKRQKT--IEVKEVKMRPNIDDHDYETKMKAVRRFFDDGDKVKVT 167
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE + + + L+ R + + E++ E R + ++L P
Sbjct: 168 LRFRGREMAHQELGMRLLNRVREETNEISKVEAEPKLEGRQMMMVLAP 215
>gi|303230813|ref|ZP_07317560.1| translation initiation factor IF-3 [Veillonella atypica
ACS-049-V-Sch6]
gi|401679381|ref|ZP_10811312.1| translation initiation factor IF-3 [Veillonella sp. ACP1]
gi|302514573|gb|EFL56568.1| translation initiation factor IF-3 [Veillonella atypica
ACS-049-V-Sch6]
gi|400219602|gb|EJO50466.1| translation initiation factor IF-3 [Veillonella sp. ACP1]
Length = 184
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 67/106 (63%), Gaps = 3/106 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYRYEQQK++K +KK + LKE+K+ +I+ HD+ V++K A KFL +G+KVKV +
Sbjct: 79 GKYRYEQQKREKEAKKKQKI--VTLKEVKLRPHIEDHDFYVKMKNASKFLGEGNKVKVTI 136
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILV 113
+GRE + + ++ RF ++ E AS E+ RN+ +ILV
Sbjct: 137 MFRGRELSHPELGMAVLTRFAEELKETASIEKAAKLEGRNMTMILV 182
>gi|383768406|ref|YP_005447469.1| translation initiation factor IF-3 [Bradyrhizobium sp. S23321]
gi|381356527|dbj|BAL73357.1| translation initiation factor IF-3 [Bradyrhizobium sp. S23321]
Length = 201
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+Y QKK +K+ +++KE+K+ ID HDY V+++A ++F ++GDKVK+ +
Sbjct: 96 GKYKYSAQKKAAEARKRQKI--VEIKEIKLRPMIDDHDYEVKMRAMQRFFEEGDKVKITL 153
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE + I +L+ + + DV ELA E++ F R + ++L P
Sbjct: 154 RYRGREMAHQEIGTKLLDKIKTDVAELAKVEQDARFEGRQVVMVLAP 200
>gi|304393066|ref|ZP_07374995.1| translation initiation factor IF-3 [Ahrensia sp. R2A130]
gi|303294831|gb|EFL89202.1| translation initiation factor IF-3 [Ahrensia sp. R2A130]
Length = 151
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+Y QKK +KK +++KE+KM NID HDY V++++ +F ++GDKVKV +
Sbjct: 46 GKYKYAAQKKAAEARKKQKT--VEVKEIKMRPNIDTHDYEVKMRSVFRFFEEGDKVKVTL 103
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE N+ ++L+++ + D E+A E R + ++L P
Sbjct: 104 RFRGREMAHMNLGMDLLKKVKEDTDEIAKVEAEPKLEGRQMMMVLAP 150
>gi|254420070|ref|ZP_05033794.1| translation initiation factor IF-3 [Brevundimonas sp. BAL3]
gi|196186247|gb|EDX81223.1| translation initiation factor IF-3 [Brevundimonas sp. BAL3]
Length = 162
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+++QKKK Q+K+ ++LKE+K+ NID HDY V+ KA +F +GDKVKV +
Sbjct: 57 GKHRFQEQKKKAEQRKRQKV--VELKEIKLRPNIDTHDYEVKAKAMHRFFDEGDKVKVTL 114
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEE-NKNFRDRNIFIILVP 114
+GRE + ++L+ + Q D E+A E R + +IL P
Sbjct: 115 RFRGREMAHPELGMKLLNKVQADFDEIAKVEFAPKMEGRQMIMILAP 161
>gi|420238172|ref|ZP_14742596.1| translation initiation factor IF-3 [Rhizobium sp. CF080]
gi|398088157|gb|EJL78726.1| translation initiation factor IF-3 [Rhizobium sp. CF080]
Length = 132
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y QKK +KK +++KE+KM NID HDY V++KA +F +DGDKVKV
Sbjct: 26 LGKLKYANQKKAAEARKKQKI--VEIKEIKMRPNIDTHDYDVKMKAMNRFFEDGDKVKVT 83
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE + + ++L+ + ++D E+A E R + ++L P
Sbjct: 84 LKFRGREMAHQELGMKLLLQVKDDTTEIAKVEAEPKLEGRQMMMVLAP 131
>gi|390450452|ref|ZP_10236043.1| translation initiation factor IF-3 [Nitratireductor aquibiodomus
RA22]
gi|389662355|gb|EIM73921.1| translation initiation factor IF-3 [Nitratireductor aquibiodomus
RA22]
Length = 123
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y+ QKK +KK +++KE+KM NID HDY V++KA R+F + GDKVK+
Sbjct: 15 LGKMKYQSQKKAAEARKKQKT--IEIKEIKMRPNIDTHDYEVKMKAVRRFFEAGDKVKLT 72
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE + ++L+ R + +V +A E R + ++L P
Sbjct: 73 LRFRGREMAHMELGMQLLNRVKEEVEPIAKVEAEPKLEGRQMMMVLAP 120
>gi|416999205|ref|ZP_11939874.1| translation initiation factor IF-3 [Veillonella parvula
ACS-068-V-Sch12]
gi|333977358|gb|EGL78217.1| translation initiation factor IF-3 [Veillonella parvula
ACS-068-V-Sch12]
Length = 174
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 67/106 (63%), Gaps = 3/106 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYRYEQQK++K +KK + LKE+K+ +I+ HD+ V++K A KFL +G+KVKV +
Sbjct: 69 GKYRYEQQKREKEAKKKQKI--VTLKEVKLRPHIEDHDFYVKMKNASKFLGEGNKVKVTI 126
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILV 113
+GRE + + ++ RF ++ E AS E+ RN+ +ILV
Sbjct: 127 MFRGRELSHPELGMAVLTRFAEELKETASIEKAAKLEGRNMTMILV 172
>gi|297583668|ref|YP_003699448.1| translation initiation factor IF-3 [Bacillus selenitireducens
MLS10]
gi|297142125|gb|ADH98882.1| translation initiation factor IF-3 [Bacillus selenitireducens
MLS10]
Length = 168
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 68/107 (63%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+EQQKK+K +KK +++KE+++ NI++HD++ +L+ ARKFL GDKVK +
Sbjct: 59 GKFRFEQQKKEKEARKKQKV--INVKEVRLSPNIEEHDFNTKLRNARKFLTKGDKVKAAI 116
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVP 114
+GR I E++ R + ++++ E+K R++F+IL P
Sbjct: 117 RFRGRAITHSEIGREVLMRMAEECKDISTIESKPKMEGRSMFLILAP 163
>gi|323339585|ref|ZP_08079859.1| translation initiation factor IF3 [Lactobacillus ruminis ATCC
25644]
gi|335996445|ref|ZP_08562362.1| protein translation initiation factor 3 [Lactobacillus ruminis
SPM0211]
gi|347525539|ref|YP_004832287.1| translation initiation factor IF-3 [Lactobacillus ruminis ATCC
27782]
gi|417973874|ref|ZP_12614708.1| translation initiation factor IF-3 [Lactobacillus ruminis ATCC
25644]
gi|323092980|gb|EFZ35578.1| translation initiation factor IF3 [Lactobacillus ruminis ATCC
25644]
gi|335351515|gb|EGM53006.1| protein translation initiation factor 3 [Lactobacillus ruminis
SPM0211]
gi|345284498|gb|AEN78351.1| Translation initiation factor IF-3 [Lactobacillus ruminis ATCC
27782]
gi|346329745|gb|EGX98030.1| translation initiation factor IF-3 [Lactobacillus ruminis ATCC
25644]
Length = 166
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 69/107 (64%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYR+E QKK++ +KK +++KE+++ ID +D++ ++K ARKFL GDKVKV +
Sbjct: 58 GKYRFELQKKQREARKKQKV--INVKEVRLSPTIDTNDFNTKMKNARKFLSKGDKVKVSI 115
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I E++ RF + ++A+ E+K D R++F++L P
Sbjct: 116 RFKGRAITHKEIGREVLDRFAEETSDVATVESKPKMDGRSMFLMLAP 162
>gi|33862392|ref|NP_893952.1| translation initiation factor IF-3 [Prochlorococcus marinus str.
MIT 9313]
gi|39931215|sp|Q7TV76.1|IF3_PROMM RecName: Full=Translation initiation factor IF-3
gi|33640505|emb|CAE20294.1| Translatioin Initiation factor 3 [Prochlorococcus marinus str. MIT
9313]
Length = 219
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 72/115 (62%), Gaps = 3/115 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+++EQ+KK K +KKS ++ ++KE+KM Y IDQHDY+VR+ A +FLK GDKVK V
Sbjct: 75 GKFKFEQEKKAKEAKKKS--HQTEVKEVKMRYKIDQHDYNVRIGQAVRFLKAGDKVKCTV 132
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNKALLQKA 122
+GRE + +A L+RR D+ E A + R+ RN+ + L P K L K
Sbjct: 133 IFRGREIQHTALAETLLRRMAKDLEEQAEIQQAPKREGRNMIMFLTPRKTPLIKT 187
>gi|238018997|ref|ZP_04599423.1| hypothetical protein VEIDISOL_00859 [Veillonella dispar ATCC 17748]
gi|313893048|ref|ZP_07826625.1| translation initiation factor IF-3 [Veillonella sp. oral taxon 158
str. F0412]
gi|237864481|gb|EEP65771.1| hypothetical protein VEIDISOL_00859 [Veillonella dispar ATCC 17748]
gi|313442401|gb|EFR60816.1| translation initiation factor IF-3 [Veillonella sp. oral taxon 158
str. F0412]
Length = 172
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 67/106 (63%), Gaps = 3/106 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYRYEQQK++K +KK + LKE+K+ +I+ HD+ V++K A KFL +G+KVKV +
Sbjct: 67 GKYRYEQQKREKEAKKKQKI--VTLKEVKLRPHIEDHDFYVKMKNASKFLGEGNKVKVTI 124
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILV 113
+GRE + + ++ RF ++ E AS E+ RN+ +ILV
Sbjct: 125 MFRGRELSHPELGMAVLTRFAEELKETASIEKAAKLEGRNMTMILV 170
>gi|429760159|ref|ZP_19292649.1| translation initiation factor IF-3 [Veillonella atypica KON]
gi|429178564|gb|EKY19842.1| translation initiation factor IF-3 [Veillonella atypica KON]
Length = 194
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 67/106 (63%), Gaps = 3/106 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYRYEQQK++K +KK + LKE+K+ +I+ HD+ V++K A KFL +G+KVKV +
Sbjct: 89 GKYRYEQQKREKEAKKKQKI--VTLKEVKLRPHIEDHDFYVKMKNASKFLGEGNKVKVTI 146
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILV 113
+GRE + + ++ RF ++ E AS E+ RN+ +ILV
Sbjct: 147 MFRGRELSHPELGMAVLTRFAEELKETASIEKAAKLEGRNMTMILV 192
>gi|299821796|ref|ZP_07053684.1| translation initiation factor IF3 [Listeria grayi DSM 20601]
gi|299817461|gb|EFI84697.1| translation initiation factor IF3 [Listeria grayi DSM 20601]
Length = 196
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 67/107 (62%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+EQQKK K +K + +KE+++ ID+HD++ +L+ ARKFL+ GDKVK +
Sbjct: 88 GKFRFEQQKKDKEARKNQKV--IVMKEVRLSPTIDEHDFNTKLRNARKFLEKGDKVKCSI 145
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I +++ RF + +L++ E K D R++F++L P
Sbjct: 146 RFKGRAITHKEIGQKVLDRFATECTDLSTVEQKAKMDGRSMFLVLAP 192
>gi|29427472|sp|Q8EPF5.2|IF3_OCEIH RecName: Full=Translation initiation factor IF-3
Length = 172
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYR+EQQKK+K +KK +++KE++ I HD+ +LK ARKFL+ GDKVK V
Sbjct: 63 GKYRFEQQKKEKEARKKQKV--INVKEVRFTPGIGDHDFETKLKNARKFLEKGDKVKAAV 120
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVP 114
+GR + + E++ RF +V +L + E K RN+F+++ P
Sbjct: 121 RFRGRAITHKELGREVLDRFAEEVKDLGTIETKPKMEGRNMFMMVAP 167
>gi|406670339|ref|ZP_11077591.1| translation initiation factor IF-3 [Facklamia ignava CCUG 37419]
gi|405579646|gb|EKB53741.1| translation initiation factor IF-3 [Facklamia ignava CCUG 37419]
Length = 185
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 69/107 (64%), Gaps = 3/107 (2%)
Query: 10 KYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVN 69
KYRYE QKK+K Q+K + +KE+++ +I++HDY +L+ A +FL+ GDKVKV +
Sbjct: 78 KYRYELQKKEKEQRKNQRV--IAVKEIRLSPSIEEHDYQTKLRQAIRFLEKGDKVKVSIR 135
Query: 70 LKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVPN 115
+GRE ++I ++I F +D E++ E++ R++F I+ P+
Sbjct: 136 FRGREITHKDIGKDVIEDFIDDTSEISVVESRPKMEGRSMFAIIAPS 182
>gi|86608017|ref|YP_476779.1| translation initiation factor IF-3 [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86556559|gb|ABD01516.1| translation initiation factor IF-3 [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 185
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
Query: 32 DLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQND 91
++KE+K YNI +HDY+VRL++A++FL DGDKVK V +GRE + + EL+ R D
Sbjct: 98 EIKEVKFRYNIGEHDYNVRLRSAQQFLGDGDKVKATVMFRGREAQHAELGEELLHRLFKD 157
Query: 92 VGELASEENKNFRD-RNIFIILVPNKAL 118
+ E+A + ++ RNI +IL P K++
Sbjct: 158 LQEVAEMQQPPQKEGRNITMILSPKKSV 185
>gi|354580056|ref|ZP_08998961.1| translation initiation factor IF-3 [Paenibacillus lactis 154]
gi|353202487|gb|EHB67936.1| translation initiation factor IF-3 [Paenibacillus lactis 154]
Length = 164
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+RYEQQKK+K +K +D+KE+ NI++HD+ +L+ KFLKDGDKVK V
Sbjct: 58 GKFRYEQQKKEKEARKNQKI--VDIKEVWFRANIEEHDFQTKLRNVVKFLKDGDKVKCSV 115
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILVP 114
+GRE NI +++ R + +V +L E R++ +IL P
Sbjct: 116 RFRGREITHANIGQKILERVKTEVADLCVVERQPKLEGRSMIMILAP 162
>gi|340359801|ref|ZP_08682274.1| translation initiation factor IF3 [Actinomyces sp. oral taxon 448
str. F0400]
gi|339884091|gb|EGQ73913.1| translation initiation factor IF3 [Actinomyces sp. oral taxon 448
str. F0400]
Length = 200
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE K + ++ A + LKE++ IDQHDY+ ++ +FLK GDKVK IV
Sbjct: 48 GKFKYESAMKARDARRNQANTQ--LKEIQFRPKIDQHDYATKMGHVERFLKGGDKVKCIV 105
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + I L+RR +V EL + E+ +D RN+ ++L P +
Sbjct: 106 RFRGREQSRPELGIRLLRRVAEEVSELGNVESHPRQDGRNMVMVLAPTR 154
>gi|23099607|ref|NP_693073.1| translation initiation factor IF-3 [Oceanobacillus iheyensis
HTE831]
gi|22777837|dbj|BAC14108.1| translation initiation factor IF-3 [Oceanobacillus iheyensis
HTE831]
Length = 168
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYR+EQQKK+K +KK +++KE++ I HD+ +LK ARKFL+ GDKVK V
Sbjct: 59 GKYRFEQQKKEKEARKKQKV--INVKEVRFTPGIGDHDFETKLKNARKFLEKGDKVKAAV 116
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVP 114
+GR + + E++ RF +V +L + E K RN+F+++ P
Sbjct: 117 RFRGRAITHKELGREVLDRFAEEVKDLGTIETKPKMEGRNMFMMVAP 163
>gi|430006153|emb|CCF21956.1| Initiation factor 3 [Rhizobium sp.]
Length = 132
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y QKK +KK +++KE+KM NID HDY V++KA +F +DGDKV+V
Sbjct: 26 LGKLKYANQKKAAEARKKQKI--VEIKEIKMRPNIDTHDYEVKMKAINRFFEDGDKVRVT 83
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE + + ++L+++ + D E+A E R + ++L P
Sbjct: 84 LRFRGREMAHQELGLKLLQQVKEDTAEIAKVEAEPKLEGRQMMMVLAP 131
>gi|403070329|ref|ZP_10911661.1| translation initiation factor IF-3 [Oceanobacillus sp. Ndiop]
Length = 167
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 67/107 (62%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+EQQKK+K +KK +++KE++ I HD+ +LK ARKFL+ GDKVK V
Sbjct: 59 GKFRFEQQKKEKEARKKQKV--INVKEVRFTPGIGDHDFETKLKNARKFLEKGDKVKAAV 116
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVP 114
+GR + + E++ RF ++V ++A+ E K RN+F+++ P
Sbjct: 117 RFRGRAITHKELGREVLDRFADEVKDIATIETKPKMEGRNMFMMVAP 163
>gi|260887110|ref|ZP_05898373.1| translation initiation factor IF-3 [Selenomonas sputigena ATCC
35185]
gi|330839117|ref|YP_004413697.1| Translation initiation factor IF-3 [Selenomonas sputigena ATCC
35185]
gi|260863172|gb|EEX77672.1| translation initiation factor IF-3 [Selenomonas sputigena ATCC
35185]
gi|329746881|gb|AEC00238.1| Translation initiation factor IF-3 [Selenomonas sputigena ATCC
35185]
Length = 193
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 68/107 (63%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYRYEQQK++K +KK + +KE+K+ NI+QHD+ V+LK A +FL++G+KVKV +
Sbjct: 81 GKYRYEQQKREKEAKKKQKI--VTIKEVKLRPNIEQHDFDVKLKNALRFLEEGNKVKVTI 138
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE + E++ + + + EL S E + +N+ +IL P
Sbjct: 139 MFRGRELSHPELGREVLNKVADRLKELVSIERDAKLEGKNMTMILAP 185
>gi|365158097|ref|ZP_09354338.1| translation initiation factor IF-3 [Bacillus smithii 7_3_47FAA]
gi|363621926|gb|EHL73108.1| translation initiation factor IF-3 [Bacillus smithii 7_3_47FAA]
Length = 167
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 69/107 (64%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY++EQQKK+K +KK +++KE+++ I++HD++ +L+ ARKFL+ GDKVK +
Sbjct: 59 GKYKFEQQKKEKEARKKQKV--INVKEVRLSPTIEEHDFNTKLRNARKFLEKGDKVKASI 116
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + + +++ RF ++A+ E K D R++FI+L P
Sbjct: 117 RFKGRAITHKELGQKVLDRFAEACDDVATVETKPKMDGRSMFIVLAP 163
>gi|304317240|ref|YP_003852385.1| translation initiation factor IF-3 [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|433655421|ref|YP_007299129.1| translation initiation factor IF-3 [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|302778742|gb|ADL69301.1| translation initiation factor IF-3 [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|433293610|gb|AGB19432.1| translation initiation factor IF-3 [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 170
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 69/107 (64%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYRYEQ KK+K +KK +++KE++M I++HD+ V++K A KFLKDGDKVKV +
Sbjct: 63 GKYRYEQSKKEKESKKKQKV--INIKEIRMTPAIEEHDFGVKVKNAIKFLKDGDKVKVTI 120
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE N+A EL+ RF V E + E+ N RN+ +IL P
Sbjct: 121 RFRGREAAHTNLAEELLNRFAKSVEEYGNVEKAPNMEGRNLMMILSP 167
>gi|86747192|ref|YP_483688.1| translation initiation factor IF-3 [Rhodopseudomonas palustris
HaA2]
gi|86570220|gb|ABD04777.1| bacterial translation initiation factor 3 (bIF-3) [Rhodopseudomonas
palustris HaA2]
Length = 145
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++Y QKK +KK +++KE+K+ ID HDY V++KA ++F ++GDKVK+ +
Sbjct: 40 GKFKYSAQKKAAEARKKQKI--VEIKEIKLRPMIDDHDYDVKMKAMQRFFEEGDKVKITL 97
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE + I +L+ + + DV E+A E++ F R + ++L P
Sbjct: 98 RYRGREMAHQEIGTKLLEKVKADVAEIAKVEQDARFEGRQVVMVLAP 144
>gi|402834346|ref|ZP_10882948.1| translation initiation factor IF-3 [Selenomonas sp. CM52]
gi|402277964|gb|EJU27030.1| translation initiation factor IF-3 [Selenomonas sp. CM52]
Length = 147
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 68/107 (63%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYRYEQQK++K +KK + +KE+K+ NI+QHD+ V+LK A +FL++G+KVKV +
Sbjct: 35 GKYRYEQQKREKEAKKKQKI--VTIKEVKLRPNIEQHDFDVKLKNALRFLEEGNKVKVTI 92
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE + E++ + + + EL S E + +N+ +IL P
Sbjct: 93 MFRGRELSHPELGREVLNKVADRLKELVSIERDAKLEGKNMTMILAP 139
>gi|375089028|ref|ZP_09735364.1| translation initiation factor IF-3 [Dolosigranulum pigrum ATCC
51524]
gi|374560829|gb|EHR32182.1| translation initiation factor IF-3 [Dolosigranulum pigrum ATCC
51524]
Length = 168
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 68/110 (61%), Gaps = 8/110 (7%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFL-KDGDKVKVI 67
KY+YEQQKK+K Q+K +++KE++ ID HD++ +L+ RKFL KDGDKVK
Sbjct: 59 GKYKYEQQKKEKEQRKNQKT--IEVKEIRFSPTIDDHDFNTKLRQGRKFLEKDGDKVKAT 116
Query: 68 VNLKGRENEFRNIAIELIRRF---QNDVGELASEENKNFRDRNIFIILVP 114
+ +GR ++I E++ RF DVG++ E+ R++F+++ P
Sbjct: 117 IRFRGRAITHKDIGREVLERFAEETKDVGDI--EQKPKMDGRSMFLMMAP 164
>gi|294010777|ref|YP_003544237.1| translation initiation factor IF-3 [Sphingobium japonicum UT26S]
gi|292674107|dbj|BAI95625.1| translation initiation factor IF-3 [Sphingobium japonicum UT26S]
Length = 177
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 63/111 (56%), Gaps = 3/111 (2%)
Query: 5 YFFLSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKV 64
+ + KY+YE QKK +K ++KE+KM NID HDY ++K F+ +GDKV
Sbjct: 68 FLDIGKYKYEAQKKANLARKTQRTQ--EIKEIKMRPNIDDHDYDTKMKKVHDFIGEGDKV 125
Query: 65 KVIVNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
K+ + +GRE + + ++L++R +VGE+A E R + ++L P
Sbjct: 126 KITLRFRGRELSHQQLGMQLLQRVAENVGEIAKVEAYPRMEGRQMLMVLAP 176
>gi|294677127|ref|YP_003577742.1| translation initiation factor IF [Rhodobacter capsulatus SB 1003]
gi|294475947|gb|ADE85335.1| translation initiation factor IF-3 [Rhodobacter capsulatus SB 1003]
Length = 141
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YEQQKK+ +KK +++KE+K D HDY V++++ KFL++GDKVKV +
Sbjct: 36 GKFKYEQQKKEAEARKKQKV--IEIKEIKFRPGTDTHDYEVKMRSVMKFLEEGDKVKVTL 93
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVP 114
+GRE + + +EL+ R DVG+ E+ R + +++ P
Sbjct: 94 RFRGREMAHQQLGMELLNRVVGDVGDAGKVESMPKLEGRQMVMMIAP 140
>gi|87301670|ref|ZP_01084510.1| translation initiation factor IF-3 [Synechococcus sp. WH 5701]
gi|87283887|gb|EAQ75841.1| translation initiation factor IF-3 [Synechococcus sp. WH 5701]
Length = 218
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 71/113 (62%), Gaps = 3/113 (2%)
Query: 10 KYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVN 69
K+++EQ+KK K +KKS ++ ++KE+KM Y ID HDY VR+ A +FLKDGDKVK V
Sbjct: 76 KFKFEQEKKAKEAKKKS--HQTEVKEVKMRYKIDSHDYQVRIGQAVRFLKDGDKVKCTVI 133
Query: 70 LKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNKALLQK 121
+GRE + +A +L+ R D+ E A + R+ RN+ + L P K L K
Sbjct: 134 FRGREIQHTALAEQLLFRMAKDLEESAEIQQDPKREGRNMIMFLTPRKTPLTK 186
>gi|91974650|ref|YP_567309.1| translation initiation factor IF-3 [Rhodopseudomonas palustris
BisB5]
gi|91681106|gb|ABE37408.1| bacterial translation initiation factor 3 (bIF-3) [Rhodopseudomonas
palustris BisB5]
Length = 132
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++Y QKK +KK +++KE+K+ ID HDY V++KA ++F ++GDKVK+ +
Sbjct: 27 GKFKYSAQKKAAEARKKQKI--VEIKEIKLRPMIDDHDYDVKMKAMQRFFEEGDKVKITL 84
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE + I +L+ + + DV E+A E++ F R + ++L P
Sbjct: 85 RYRGREMAHQEIGTKLLEKVKADVAEIAKVEQDARFEGRQVVMVLAP 131
>gi|424779949|ref|ZP_18206835.1| Translation initiation factor 3 [Catellicoccus marimammalium
M35/04/3]
gi|422843488|gb|EKU27925.1| Translation initiation factor 3 [Catellicoccus marimammalium
M35/04/3]
Length = 173
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 69/107 (64%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+EQQKK++ +KK + +KE+++ ID +D++ +L+ ARKFL GDKVKV +
Sbjct: 65 GKFRFEQQKKEREARKKQKV--ISVKEVRLSPTIDTNDFNTKLRNARKFLGKGDKVKVSI 122
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I E++ R ++V ++A+ E + D R++F++L P
Sbjct: 123 RFKGRAITHKEIGQEVLTRLADEVSDIANVEQRAKMDGRSMFLVLAP 169
>gi|296117436|ref|ZP_06836024.1| translation initiation factor IF-3 [Gluconacetobacter hansenii ATCC
23769]
gi|295976038|gb|EFG82828.1| translation initiation factor IF-3 [Gluconacetobacter hansenii ATCC
23769]
Length = 173
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 72/107 (67%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YEQQKK+ +KK +++KE+K+ NID++DY V+++A + F+ +GDKVKV +
Sbjct: 68 GKFKYEQQKKRNEARKKQKV--IEIKEVKVRPNIDENDYQVKMRAMKSFIGEGDKVKVTL 125
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVP 114
+GRE +++ I+++ R ++++ E+A E+ +R + ++L P
Sbjct: 126 RFRGREMAHQDLGIKVLERVRSEMDEIAKVEHMPKLENRQMIMVLAP 172
>gi|404490266|ref|YP_006714372.1| translation initiation factor IF-3 [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|423683369|ref|ZP_17658208.1| translation initiation factor IF-3 [Bacillus licheniformis WX-02]
gi|52349267|gb|AAU41901.1| translation initiation factor IF-3 [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|383440143|gb|EID47918.1| translation initiation factor IF-3 [Bacillus licheniformis WX-02]
Length = 211
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYR+EQQKK+K +K ++LKE+++ I++HD++ +L+ A KFL+ GDKVK +
Sbjct: 103 GKYRFEQQKKEKEARKNQKI--INLKEVRLSPGIEEHDFNTKLRNAIKFLQKGDKVKASI 160
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I ++ RF E+A+ E K D R++F++L P
Sbjct: 161 RFKGRAITHKEIGQRVLDRFSEACAEVATVETKPKMDGRSMFLVLAP 207
>gi|258515612|ref|YP_003191834.1| translation initiation factor IF-3 [Desulfotomaculum acetoxidans
DSM 771]
gi|257779317|gb|ACV63211.1| translation initiation factor IF-3 [Desulfotomaculum acetoxidans
DSM 771]
Length = 164
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 67/107 (62%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YEQ K++K +KK + +KE+K+ NI++HD+ V+ K A +FLKDGDKVKV +
Sbjct: 57 GKYKYEQSKREKETRKKQRI--ISVKEVKLRPNIEEHDFEVKAKNAVRFLKDGDKVKVTI 114
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE N+ +L+ + V ++A+ E + +N+ +IL P
Sbjct: 115 MFRGREIVHTNLGQQLLVKMAEQVKDIATVERHPKLEGKNMIMILAP 161
>gi|347760505|ref|YP_004868066.1| translation initiation factor 3 [Gluconacetobacter xylinus NBRC
3288]
gi|347579475|dbj|BAK83696.1| translation initiation factor 3 [Gluconacetobacter xylinus NBRC
3288]
Length = 173
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 71/107 (66%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YEQQKK+ +KK +++KE+K+ NID++DY V+++A + F+ +GDKVKV +
Sbjct: 68 GKFKYEQQKKRNEARKKQKV--IEIKEVKVRPNIDENDYQVKMRAMKTFIGEGDKVKVTL 125
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVP 114
+GRE +++ ++++ R + ++ ELA E+ +R + ++L P
Sbjct: 126 RFRGREMAHQDLGVKVLERIRAEMDELAKVEHMPKLENRQMIMVLAP 172
>gi|390168804|ref|ZP_10220757.1| translation initiation factor IF-3 [Sphingobium indicum B90A]
gi|389588592|gb|EIM66634.1| translation initiation factor IF-3 [Sphingobium indicum B90A]
Length = 172
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 63/111 (56%), Gaps = 3/111 (2%)
Query: 5 YFFLSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKV 64
+ + KY+YE QKK +K ++KE+KM NID HDY ++K F+ +GDKV
Sbjct: 63 FLDIGKYKYEAQKKANLARKTQRTQ--EIKEIKMRPNIDDHDYDTKMKKVHDFIGEGDKV 120
Query: 65 KVIVNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
K+ + +GRE + + ++L++R +VGE+A E R + ++L P
Sbjct: 121 KITLRFRGRELSHQQLGMQLLQRVAENVGEIAKVEAYPRMEGRQMLMVLAP 171
>gi|319407917|emb|CBI81571.1| translation initiation factor IF-3 [Bartonella schoenbuchensis R1]
Length = 172
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 65/108 (60%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y+ QKK +KK +++KE+KM N+D HDY V+LKA +F+ G+KVK+
Sbjct: 66 LGKLKYQNQKKAAETRKKQKT--IEVKEIKMRPNVDVHDYEVKLKAVHRFIDHGNKVKIT 123
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE +++ ++L++R + D E+A E R + +++ P
Sbjct: 124 LRFRGREMAHQDLGMKLLQRVKEDTSEIAKIESEPKLEGRQMMMVIAP 171
>gi|78183715|ref|YP_376149.1| translation initiation factor IF-3 [Synechococcus sp. CC9902]
gi|123743576|sp|Q3B0M2.1|IF3_SYNS9 RecName: Full=Translation initiation factor IF-3
gi|78168009|gb|ABB25106.1| bacterial translation initiation factor 3 (bIF-3) [Synechococcus
sp. CC9902]
Length = 217
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 71/113 (62%), Gaps = 3/113 (2%)
Query: 10 KYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVN 69
K+++EQ+KK K +KKS ++ ++KE+KM Y ID HDY VR+ A++FLK GDKVK V
Sbjct: 76 KFKFEQEKKAKEAKKKS--HQTEVKEVKMRYKIDSHDYDVRIGQAQRFLKAGDKVKCTVI 133
Query: 70 LKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNKALLQK 121
+GRE + +A L+RR D+ E A + R+ RN+ + L P K L K
Sbjct: 134 FRGREIQHTALAEVLLRRMAKDLEEKAEIQQSPKREGRNMIMFLTPRKTPLLK 186
>gi|116071706|ref|ZP_01468974.1| translation initiation factor IF-3 [Synechococcus sp. BL107]
gi|116065329|gb|EAU71087.1| translation initiation factor IF-3 [Synechococcus sp. BL107]
Length = 217
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 71/113 (62%), Gaps = 3/113 (2%)
Query: 10 KYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVN 69
K+++EQ+KK K +KKS ++ ++KE+KM Y ID HDY VR+ A++FLK GDKVK V
Sbjct: 76 KFKFEQEKKAKEAKKKS--HQTEVKEVKMRYKIDSHDYDVRIGQAQRFLKAGDKVKCTVI 133
Query: 70 LKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNKALLQK 121
+GRE + +A L+RR D+ E A + R+ RN+ + L P K L K
Sbjct: 134 FRGREIQHTALAEVLLRRMAKDLEEKAEIQQSPKREGRNMIMFLTPRKTPLLK 186
>gi|49474873|ref|YP_032914.1| translation initiation factor IF-3 [Bartonella henselae str.
Houston-1]
gi|61213111|sp|Q6G570.1|IF3_BARHE RecName: Full=Translation initiation factor IF-3
gi|49237678|emb|CAF26865.1| Translation initiation factor IF-3 [Bartonella henselae str.
Houston-1]
Length = 172
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 65/106 (61%), Gaps = 3/106 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y+ QKK +KK +++KE+KM N+D HDY V+LKA +F+ +GDKVK+
Sbjct: 66 LGKLKYQTQKKAAETRKKQKV--IEIKEIKMRPNVDVHDYGVKLKAIHRFIGNGDKVKIT 123
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIIL 112
+ +GRE +++ ++L++R + D E+A E R + +++
Sbjct: 124 LRFRGREMAHQDLGLKLLQRVKEDTSEIAKIESEPKLEGRQMMMVI 169
>gi|229027592|ref|ZP_04183810.1| Translation initiation factor IF-3 [Bacillus cereus AH1272]
gi|228733711|gb|EEL84487.1| Translation initiation factor IF-3 [Bacillus cereus AH1272]
Length = 112
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+EQQKK+K Q+K + +KE+++ ID+HD++ +L+ A KFL+ GDKVK +
Sbjct: 4 GKFRFEQQKKEKEQRKNQKV--ISMKEVRLSPTIDEHDFNTKLRNAIKFLEKGDKVKASI 61
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVP 114
KGR + I ++ RF E+++ E+K R++F++L P
Sbjct: 62 RFKGRAITHKEIGQRVLDRFSEACAEVSTIESKPKMEGRSMFLVLAP 108
>gi|254500562|ref|ZP_05112713.1| translation initiation factor IF-3, C-terminal domain, putative
[Labrenzia alexandrii DFL-11]
gi|222436633|gb|EEE43312.1| translation initiation factor IF-3, C-terminal domain, putative
[Labrenzia alexandrii DFL-11]
Length = 135
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
+Y+Y+ QKK +KK +++KE+KM NID HDY V++K +F DGDKVKV +
Sbjct: 29 GRYKYQAQKKAAEARKKQKT--VEIKEIKMRPNIDTHDYEVKMKNMLRFFNDGDKVKVTL 86
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNK 116
+GRE +++ ++L+ + +++ E+A E + R + ++L P K
Sbjct: 87 RFRGREMAHQDLGMKLLHKVRDETSEIAKVESHPKLEGRQMVMVLAPIK 135
>gi|42783752|ref|NP_980999.1| translation initiation factor IF-3 [Bacillus cereus ATCC 10987]
gi|49187466|ref|YP_030718.1| translation initiation factor IF-3 [Bacillus anthracis str. Sterne]
gi|49481334|ref|YP_038621.1| translation initiation factor IF-3 [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|52140934|ref|YP_085896.1| translation initiation factor IF-3 [Bacillus cereus E33L]
gi|118479723|ref|YP_896874.1| translation initiation factor IF-3 [Bacillus thuringiensis str. Al
Hakam]
gi|170708689|ref|ZP_02899127.1| translation initiation factor IF-3 [Bacillus anthracis str. A0389]
gi|177653087|ref|ZP_02935374.1| translation initiation factor IF-3 [Bacillus anthracis str. A0174]
gi|222098037|ref|YP_002532094.1| translation initiation factor if-3 [Bacillus cereus Q1]
gi|225866552|ref|YP_002751930.1| translation initiation factor IF-3 [Bacillus cereus 03BB102]
gi|229602129|ref|YP_002868854.1| translation initiation factor IF-3 [Bacillus anthracis str. A0248]
gi|254736683|ref|ZP_05194389.1| translation initiation factor IF-3 [Bacillus anthracis str. Western
North America USA6153]
gi|254741721|ref|ZP_05199408.1| translation initiation factor IF-3 [Bacillus anthracis str. Kruger
B]
gi|301056081|ref|YP_003794292.1| translation initiation factor IF-3 [Bacillus cereus biovar
anthracis str. CI]
gi|384182384|ref|YP_005568146.1| translation initiation factor IF-3 [Bacillus thuringiensis serovar
finitimus YBT-020]
gi|42739682|gb|AAS43607.1| translation initiation factor IF-3 [Bacillus cereus ATCC 10987]
gi|49181393|gb|AAT56769.1| translation initiation factor IF-3 [Bacillus anthracis str. Sterne]
gi|49332890|gb|AAT63536.1| translation initiation factor IF-3 [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|51974403|gb|AAU15953.1| translation initiation factor IF-3 [Bacillus cereus E33L]
gi|118418948|gb|ABK87367.1| bacterial translation initiation factor 3 (bIF-3) [Bacillus
thuringiensis str. Al Hakam]
gi|170126369|gb|EDS95258.1| translation initiation factor IF-3 [Bacillus anthracis str. A0389]
gi|172081611|gb|EDT66682.1| translation initiation factor IF-3 [Bacillus anthracis str. A0174]
gi|221242095|gb|ACM14805.1| translation initiation factor IF-3 [Bacillus cereus Q1]
gi|225789540|gb|ACO29757.1| translation initiation factor IF-3 [Bacillus cereus 03BB102]
gi|229266537|gb|ACQ48174.1| translation initiation factor IF-3 [Bacillus anthracis str. A0248]
gi|300378250|gb|ADK07154.1| translation initiation factor IF-3 [Bacillus cereus biovar
anthracis str. CI]
gi|324328468|gb|ADY23728.1| translation initiation factor IF-3 [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 195
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+EQQKK+K Q+K + +KE+++ ID+HD++ +L+ A KFL+ GDKVK +
Sbjct: 87 GKFRFEQQKKEKEQRKNQKV--ISMKEVRLSPTIDEHDFNTKLRNAIKFLEKGDKVKASI 144
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVP 114
KGR + I ++ RF E+++ E+K R++F++L P
Sbjct: 145 RFKGRAITHKEIGQRVLDRFSEACAEVSTIESKPKMEGRSMFLVLAP 191
>gi|229175284|ref|ZP_04302799.1| Translation initiation factor IF-3 [Bacillus cereus MM3]
gi|228608116|gb|EEK65423.1| Translation initiation factor IF-3 [Bacillus cereus MM3]
Length = 186
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+EQQKK+K Q+K + +KE+++ ID+HD++ +L+ A KFL+ GDKVK +
Sbjct: 78 GKFRFEQQKKEKEQRKNQKV--ISMKEVRLSPTIDEHDFNTKLRNAIKFLEKGDKVKASI 135
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVP 114
KGR + I ++ RF E+++ E+K R++F++L P
Sbjct: 136 RFKGRAITHKEIGQRVLDRFSEACAEVSTIESKPKMEGRSMFLVLAP 182
>gi|410583614|ref|ZP_11320719.1| bacterial translation initiation factor 3 (bIF-3) [Thermaerobacter
subterraneus DSM 13965]
gi|410504476|gb|EKP93986.1| bacterial translation initiation factor 3 (bIF-3) [Thermaerobacter
subterraneus DSM 13965]
Length = 194
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 70/112 (62%), Gaps = 3/112 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YEQ K+ + +K+ +D+KE+KM IDQHD+ V+L+ AR+FL+DGDKVK +
Sbjct: 57 GKFKYEQAKRDREARKRQKI--VDIKEVKMRPRIDQHDFEVKLRNARRFLEDGDKVKATI 114
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNKALL 119
+GRE ++ +++ R V ++A+ E + + RN+ ++L P ++
Sbjct: 115 MFRGREIVHADLGRQVLERLARAVEDIATIERRPVVEGRNMTMVLAPRPQVV 166
>gi|83944920|ref|ZP_00957286.1| translation initiation factor [Oceanicaulis sp. HTCC2633]
gi|83851702|gb|EAP89557.1| translation initiation factor [Oceanicaulis sp. HTCC2633]
Length = 140
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K +Y++QKKK +KK D+KE+KM NID HDY V+ KA +F +DGDKVKV +
Sbjct: 35 GKLKYQEQKKKAEARKKQKTQ--DVKEIKMRPNIDIHDYQVKTKAMTRFFEDGDKVKVTL 92
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEE-NKNFRDRNIFIILVP 114
+GRE + +++++R + D E+A E R + +++ P
Sbjct: 93 RFRGREMAHQERGMDVMKRVKEDFSEVAKVELEPKLEGRQMIMVMAP 139
>gi|206969668|ref|ZP_03230622.1| translation initiation factor IF-3 [Bacillus cereus AH1134]
gi|218235389|ref|YP_002369370.1| translation initiation factor IF-3 [Bacillus cereus B4264]
gi|218899728|ref|YP_002448139.1| translation initiation factor IF-3 [Bacillus cereus G9842]
gi|228903092|ref|ZP_04067228.1| Translation initiation factor IF-3 [Bacillus thuringiensis IBL
4222]
gi|296505047|ref|YP_003666747.1| translation initiation factor IF-3 [Bacillus thuringiensis BMB171]
gi|365158643|ref|ZP_09354835.1| translation initiation factor IF-3 [Bacillus sp. 7_6_55CFAA_CT2]
gi|384188649|ref|YP_005574545.1| translation initiation factor IF-3 [Bacillus thuringiensis serovar
chinensis CT-43]
gi|402563912|ref|YP_006606636.1| translation initiation factor IF-3 [Bacillus thuringiensis HD-771]
gi|410676971|ref|YP_006929342.1| translation initiation factor IF-3 [Bacillus thuringiensis Bt407]
gi|423358339|ref|ZP_17335842.1| translation initiation factor IF-3 [Bacillus cereus VD022]
gi|423386069|ref|ZP_17363325.1| translation initiation factor IF-3 [Bacillus cereus BAG1X1-2]
gi|423411640|ref|ZP_17388760.1| translation initiation factor IF-3 [Bacillus cereus BAG3O-2]
gi|423426700|ref|ZP_17403731.1| translation initiation factor IF-3 [Bacillus cereus BAG3X2-2]
gi|423432573|ref|ZP_17409577.1| translation initiation factor IF-3 [Bacillus cereus BAG4O-1]
gi|423438009|ref|ZP_17414990.1| translation initiation factor IF-3 [Bacillus cereus BAG4X12-1]
gi|423502750|ref|ZP_17479342.1| translation initiation factor IF-3 [Bacillus cereus HD73]
gi|423527575|ref|ZP_17504020.1| translation initiation factor IF-3 [Bacillus cereus HuB1-1]
gi|423560917|ref|ZP_17537193.1| translation initiation factor IF-3 [Bacillus cereus MSX-A1]
gi|423582786|ref|ZP_17558897.1| translation initiation factor IF-3 [Bacillus cereus VD014]
gi|423584898|ref|ZP_17560985.1| translation initiation factor IF-3 [Bacillus cereus VD045]
gi|423612750|ref|ZP_17588611.1| translation initiation factor IF-3 [Bacillus cereus VD107]
gi|423631290|ref|ZP_17607037.1| translation initiation factor IF-3 [Bacillus cereus VD154]
gi|423634546|ref|ZP_17610199.1| translation initiation factor IF-3 [Bacillus cereus VD156]
gi|423640356|ref|ZP_17615974.1| translation initiation factor IF-3 [Bacillus cereus VD166]
gi|423650472|ref|ZP_17626042.1| translation initiation factor IF-3 [Bacillus cereus VD169]
gi|423657514|ref|ZP_17632813.1| translation initiation factor IF-3 [Bacillus cereus VD200]
gi|434377728|ref|YP_006612372.1| translation initiation factor IF-3 [Bacillus thuringiensis HD-789]
gi|452201044|ref|YP_007481125.1| Translation initiation factor 3 [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
gi|206735356|gb|EDZ52524.1| translation initiation factor IF-3 [Bacillus cereus AH1134]
gi|218163346|gb|ACK63338.1| translation initiation factor IF-3 [Bacillus cereus B4264]
gi|218545941|gb|ACK98335.1| translation initiation factor IF-3 [Bacillus cereus G9842]
gi|228856501|gb|EEN01025.1| Translation initiation factor IF-3 [Bacillus thuringiensis IBL
4222]
gi|296326099|gb|ADH09027.1| translation initiation factor IF-3 [Bacillus thuringiensis BMB171]
gi|326942358|gb|AEA18254.1| translation initiation factor IF-3 [Bacillus thuringiensis serovar
chinensis CT-43]
gi|363626516|gb|EHL77499.1| translation initiation factor IF-3 [Bacillus sp. 7_6_55CFAA_CT2]
gi|401086026|gb|EJP94258.1| translation initiation factor IF-3 [Bacillus cereus VD022]
gi|401104965|gb|EJQ12933.1| translation initiation factor IF-3 [Bacillus cereus BAG3O-2]
gi|401110266|gb|EJQ18175.1| translation initiation factor IF-3 [Bacillus cereus BAG3X2-2]
gi|401115706|gb|EJQ23553.1| translation initiation factor IF-3 [Bacillus cereus BAG4O-1]
gi|401119622|gb|EJQ27433.1| translation initiation factor IF-3 [Bacillus cereus BAG4X12-1]
gi|401202762|gb|EJR09612.1| translation initiation factor IF-3 [Bacillus cereus MSX-A1]
gi|401211601|gb|EJR18348.1| translation initiation factor IF-3 [Bacillus cereus VD014]
gi|401235090|gb|EJR41563.1| translation initiation factor IF-3 [Bacillus cereus VD045]
gi|401244738|gb|EJR51097.1| translation initiation factor IF-3 [Bacillus cereus VD107]
gi|401263863|gb|EJR69979.1| translation initiation factor IF-3 [Bacillus cereus VD154]
gi|401280525|gb|EJR86445.1| translation initiation factor IF-3 [Bacillus cereus VD156]
gi|401281272|gb|EJR87185.1| translation initiation factor IF-3 [Bacillus cereus VD166]
gi|401281631|gb|EJR87537.1| translation initiation factor IF-3 [Bacillus cereus VD169]
gi|401289070|gb|EJR94791.1| translation initiation factor IF-3 [Bacillus cereus VD200]
gi|401634720|gb|EJS52483.1| translation initiation factor IF-3 [Bacillus cereus BAG1X1-2]
gi|401792564|gb|AFQ18603.1| translation initiation factor IF-3 [Bacillus thuringiensis HD-771]
gi|401876285|gb|AFQ28452.1| translation initiation factor IF-3 [Bacillus thuringiensis HD-789]
gi|402452944|gb|EJV84754.1| translation initiation factor IF-3 [Bacillus cereus HuB1-1]
gi|402459989|gb|EJV91717.1| translation initiation factor IF-3 [Bacillus cereus HD73]
gi|409176100|gb|AFV20405.1| translation initiation factor IF-3 [Bacillus thuringiensis Bt407]
gi|452106437|gb|AGG03377.1| Translation initiation factor 3 [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
Length = 166
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+EQQKK+K Q+K + +KE+++ ID+HD++ +L+ A KFL+ GDKVK +
Sbjct: 58 GKFRFEQQKKEKEQRKNQKV--ISMKEVRLSPTIDEHDFNTKLRNAIKFLEKGDKVKASI 115
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVP 114
KGR + I ++ RF E+++ E+K R++F++L P
Sbjct: 116 RFKGRAITHKEIGQRVLDRFSEACAEVSTVESKPKMEGRSMFLVLAP 162
>gi|30022650|ref|NP_834281.1| translation initiation factor IF-3 [Bacillus cereus ATCC 14579]
gi|228910398|ref|ZP_04074213.1| Translation initiation factor IF-3 [Bacillus thuringiensis IBL 200]
gi|228923318|ref|ZP_04086606.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228941753|ref|ZP_04104300.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228954843|ref|ZP_04116863.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228960843|ref|ZP_04122478.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228967671|ref|ZP_04128692.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar
sotto str. T04001]
gi|228974677|ref|ZP_04135243.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228981271|ref|ZP_04141571.1| Translation initiation factor IF-3 [Bacillus thuringiensis Bt407]
gi|229048282|ref|ZP_04193850.1| Translation initiation factor IF-3 [Bacillus cereus AH676]
gi|229072076|ref|ZP_04205285.1| Translation initiation factor IF-3 [Bacillus cereus F65185]
gi|229081827|ref|ZP_04214319.1| Translation initiation factor IF-3 [Bacillus cereus Rock4-2]
gi|229112039|ref|ZP_04241582.1| Translation initiation factor IF-3 [Bacillus cereus Rock1-15]
gi|229129858|ref|ZP_04258824.1| Translation initiation factor IF-3 [Bacillus cereus BDRD-Cer4]
gi|229147133|ref|ZP_04275492.1| Translation initiation factor IF-3 [Bacillus cereus BDRD-ST24]
gi|229152769|ref|ZP_04280952.1| Translation initiation factor IF-3 [Bacillus cereus m1550]
gi|229180893|ref|ZP_04308228.1| Translation initiation factor IF-3 [Bacillus cereus 172560W]
gi|229192775|ref|ZP_04319733.1| Translation initiation factor IF-3 [Bacillus cereus ATCC 10876]
gi|449091527|ref|YP_007423968.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|38372267|sp|Q812P6.1|IF3_BACCR RecName: Full=Translation initiation factor IF-3
gi|29898208|gb|AAP11482.1| Bacterial Protein Translation Initiation Factor 3 (IF-3) [Bacillus
cereus ATCC 14579]
gi|228590614|gb|EEK48475.1| Translation initiation factor IF-3 [Bacillus cereus ATCC 10876]
gi|228602450|gb|EEK59936.1| Translation initiation factor IF-3 [Bacillus cereus 172560W]
gi|228630589|gb|EEK87235.1| Translation initiation factor IF-3 [Bacillus cereus m1550]
gi|228636382|gb|EEK92853.1| Translation initiation factor IF-3 [Bacillus cereus BDRD-ST24]
gi|228653549|gb|EEL09421.1| Translation initiation factor IF-3 [Bacillus cereus BDRD-Cer4]
gi|228671362|gb|EEL26663.1| Translation initiation factor IF-3 [Bacillus cereus Rock1-15]
gi|228701415|gb|EEL53909.1| Translation initiation factor IF-3 [Bacillus cereus Rock4-2]
gi|228711010|gb|EEL62976.1| Translation initiation factor IF-3 [Bacillus cereus F65185]
gi|228723007|gb|EEL74384.1| Translation initiation factor IF-3 [Bacillus cereus AH676]
gi|228778471|gb|EEM26738.1| Translation initiation factor IF-3 [Bacillus thuringiensis Bt407]
gi|228785080|gb|EEM33093.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228792047|gb|EEM39628.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar
sotto str. T04001]
gi|228798865|gb|EEM45844.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228804832|gb|EEM51431.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228817965|gb|EEM64043.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228836272|gb|EEM81625.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228849164|gb|EEM94003.1| Translation initiation factor IF-3 [Bacillus thuringiensis IBL 200]
gi|449025284|gb|AGE80447.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar
kurstaki str. HD73]
Length = 167
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+EQQKK+K Q+K + +KE+++ ID+HD++ +L+ A KFL+ GDKVK +
Sbjct: 59 GKFRFEQQKKEKEQRKNQKV--ISMKEVRLSPTIDEHDFNTKLRNAIKFLEKGDKVKASI 116
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVP 114
KGR + I ++ RF E+++ E+K R++F++L P
Sbjct: 117 RFKGRAITHKEIGQRVLDRFSEACAEVSTVESKPKMEGRSMFLVLAP 163
>gi|407778096|ref|ZP_11125362.1| translation initiation factor IF-3 [Nitratireductor pacificus
pht-3B]
gi|407300128|gb|EKF19254.1| translation initiation factor IF-3 [Nitratireductor pacificus
pht-3B]
Length = 154
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y+ QKK +KK +++KE+KM NID HDY V+++A R+F ++GDKVK+
Sbjct: 47 LGKMKYQSQKKAAEARKKQKT--IEIKEIKMRPNIDTHDYEVKMRAVRRFFEEGDKVKLT 104
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE + ++L+ R + +V +A E R + ++L P
Sbjct: 105 LRFRGREMAHMELGMQLLNRVREEVEPIAKVEAEPKLEGRQMMMVLAP 152
>gi|258543037|ref|YP_003188470.1| translation initiation Factor 3 (IF-3) [Acetobacter pasteurianus
IFO 3283-01]
gi|329115644|ref|ZP_08244366.1| Translation initiation factor IF-3 [Acetobacter pomorum DM001]
gi|384042959|ref|YP_005481703.1| translation initiation Factor 3 (IF-3) [Acetobacter pasteurianus
IFO 3283-12]
gi|384051476|ref|YP_005478539.1| translation initiation Factor 3 (IF-3) [Acetobacter pasteurianus
IFO 3283-03]
gi|384054583|ref|YP_005487677.1| translation initiation Factor 3 (IF-3) [Acetobacter pasteurianus
IFO 3283-07]
gi|384057818|ref|YP_005490485.1| translation initiation Factor 3 (IF-3) [Acetobacter pasteurianus
IFO 3283-22]
gi|384060459|ref|YP_005499587.1| translation initiation Factor 3 (IF-3) [Acetobacter pasteurianus
IFO 3283-26]
gi|384063751|ref|YP_005484393.1| translation initiation Factor 3 (IF-3) [Acetobacter pasteurianus
IFO 3283-32]
gi|384119760|ref|YP_005502384.1| translation initiation Factor 3 (IF-3) [Acetobacter pasteurianus
IFO 3283-01-42C]
gi|421848891|ref|ZP_16281877.1| translation initiation Factor 3 [Acetobacter pasteurianus NBRC
101655]
gi|421851920|ref|ZP_16284612.1| translation initiation Factor 3 [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
gi|256634115|dbj|BAI00091.1| translation initiation Factor 3 (IF-3) [Acetobacter pasteurianus
IFO 3283-01]
gi|256637175|dbj|BAI03144.1| translation initiation Factor 3 (IF-3) [Acetobacter pasteurianus
IFO 3283-03]
gi|256640227|dbj|BAI06189.1| translation initiation Factor 3 (IF-3) [Acetobacter pasteurianus
IFO 3283-07]
gi|256643284|dbj|BAI09239.1| translation initiation Factor 3 (IF-3) [Acetobacter pasteurianus
IFO 3283-22]
gi|256646339|dbj|BAI12287.1| translation initiation Factor 3 (IF-3) [Acetobacter pasteurianus
IFO 3283-26]
gi|256649392|dbj|BAI15333.1| translation initiation Factor 3 (IF-3) [Acetobacter pasteurianus
IFO 3283-32]
gi|256652378|dbj|BAI18312.1| translation initiation Factor 3 (IF-3) [Acetobacter pasteurianus
IFO 3283-01-42C]
gi|256655436|dbj|BAI21363.1| translation initiation Factor 3 (IF-3) [Acetobacter pasteurianus
IFO 3283-12]
gi|326695072|gb|EGE46791.1| Translation initiation factor IF-3 [Acetobacter pomorum DM001]
gi|371460411|dbj|GAB27080.1| translation initiation Factor 3 [Acetobacter pasteurianus NBRC
101655]
gi|371479939|dbj|GAB29815.1| translation initiation Factor 3 [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
Length = 162
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 70/107 (65%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YEQQKK+ +KK +++KE+K+ NID++DY V+++A + F+ +GDKVKV +
Sbjct: 57 GKFKYEQQKKRNEAKKKQKV--IEIKEVKVRPNIDENDYQVKMRAVKTFIGEGDKVKVTL 114
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE + + I+++ R + ++ E+A E+ +R + ++L P
Sbjct: 115 RFRGREMAHQELGIKVLERIRGEMDEVAKVEQMPRLENRQMIMVLAP 161
>gi|229013778|ref|ZP_04170906.1| Translation initiation factor IF-3 [Bacillus mycoides DSM 2048]
gi|229062259|ref|ZP_04199580.1| Translation initiation factor IF-3 [Bacillus cereus AH603]
gi|229135410|ref|ZP_04264198.1| Translation initiation factor IF-3 [Bacillus cereus BDRD-ST196]
gi|229169302|ref|ZP_04297012.1| Translation initiation factor IF-3 [Bacillus cereus AH621]
gi|228614065|gb|EEK71180.1| Translation initiation factor IF-3 [Bacillus cereus AH621]
gi|228648053|gb|EEL04100.1| Translation initiation factor IF-3 [Bacillus cereus BDRD-ST196]
gi|228716987|gb|EEL68668.1| Translation initiation factor IF-3 [Bacillus cereus AH603]
gi|228747447|gb|EEL97322.1| Translation initiation factor IF-3 [Bacillus mycoides DSM 2048]
Length = 167
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+EQQKK+K Q+K + +KE+++ ID+HD++ +L+ A KFL+ GDKVK +
Sbjct: 59 GKFRFEQQKKEKEQRKNQKV--ISMKEVRLSPTIDEHDFNTKLRNAVKFLEKGDKVKASI 116
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVP 114
KGR + I ++ RF E+++ E+K R++F++L P
Sbjct: 117 RFKGRAITHKEIGQRVLDRFSEACAEVSTIESKPKMEGRSMFLVLAP 163
>gi|90421865|ref|YP_530235.1| initiation factor 3 [Rhodopseudomonas palustris BisB18]
gi|90103879|gb|ABD85916.1| bacterial translation initiation factor 3 (bIF-3) [Rhodopseudomonas
palustris BisB18]
Length = 132
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++Y QKK +KK +++KE+K+ ID HDY V+++A ++F ++GDKVK+ +
Sbjct: 27 GKFKYSAQKKAAEARKKQKI--VEIKEIKLRPMIDDHDYEVKMRAMQRFFEEGDKVKITL 84
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE + I +L+ + +NDV E A E++ F R + ++L P
Sbjct: 85 RYRGREMAHQEIGTKLLDKVKNDVAEYAKVEQDARFEGRQVVMVLAP 131
>gi|14194835|sp|Q9MS97.1|IF3C_GALSU RecName: Full=Translation initiation factor IF-3, chloroplastic
gi|8925953|gb|AAF81685.1|AF233069_8 translation initiation factor IF-3 [Galdieria sulphuraria]
Length = 181
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 72/111 (64%), Gaps = 5/111 (4%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+++ Q+KK + +KK +++ +KE+KM Y I+ HDY VR+ A KFLK G+KVK+ +
Sbjct: 74 GKFKFAQEKKSREAKKKQ--HQVTVKEIKMRYKIEDHDYQVRINQAIKFLKLGNKVKISL 131
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNF--RDRNIFIILVPNKA 117
KGRE ++ ++A +LI + + + LA E K F +NI+I+L+P K
Sbjct: 132 TFKGREIQYIDLAEKLIEKIIHSLSSLAEHE-KVFDKEGKNIYIMLLPKKT 181
>gi|56697480|ref|YP_167848.1| translation initiation factor IF-3 [Ruegeria pomeroyi DSS-3]
gi|81676179|sp|Q5LQ58.1|IF3_SILPO RecName: Full=Translation initiation factor IF-3
gi|56679217|gb|AAV95883.1| translation initiation factor IF-3 [Ruegeria pomeroyi DSS-3]
Length = 182
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
KY+YEQQK++ +KK +++KE+K N D HDY V+++ KFL++GDKVKV
Sbjct: 73 FGKYKYEQQKRESEARKKQKI--IEVKEVKFRPNTDTHDYEVKMRNVYKFLENGDKVKVT 130
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVP 114
+ +GRE +N+ EL+ R DV E+ EN R + +++ P
Sbjct: 131 LRFRGREMAHQNLGRELLERVAEDVKEMGKIENMPKMEGRQMIMMIGP 178
>gi|194476916|ref|YP_002049095.1| translation initiation factor IF-3 [Paulinella chromatophora]
gi|171191923|gb|ACB42885.1| translation initiation factor IF-3 [Paulinella chromatophora]
Length = 216
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 74/116 (63%), Gaps = 3/116 (2%)
Query: 10 KYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVN 69
K+++EQ+KK K +KKS ++ ++KE+KM Y ID HDY VR+ A +FLK GDKVK V
Sbjct: 76 KFKFEQEKKAKEAKKKS--HQTEVKEVKMRYKIDSHDYQVRIGQAVRFLKAGDKVKCTVI 133
Query: 70 LKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNKALLQKAQE 124
+GRE + ++A +L+ R D+ E + + R+ RN+ ++L P K L K +E
Sbjct: 134 FRGREIQHTSLAEQLLMRLAKDLEEQSETQQLPKREGRNMIMLLSPRKTPLTKEKE 189
>gi|30264645|ref|NP_847022.1| translation initiation factor IF-3 [Bacillus anthracis str. Ames]
gi|47778330|ref|YP_021465.2| translation initiation factor IF-3 [Bacillus anthracis str. 'Ames
Ancestor']
gi|65321943|ref|ZP_00394902.1| COG0290: Translation initiation factor 3 (IF-3) [Bacillus anthracis
str. A2012]
gi|375286569|ref|YP_005107008.1| translation initiation factor IF-3 [Bacillus cereus NC7401]
gi|30259320|gb|AAP28508.1| translation initiation factor IF-3 [Bacillus anthracis str. Ames]
gi|47552035|gb|AAT33940.2| translation initiation factor IF-3 [Bacillus anthracis str. 'Ames
Ancestor']
gi|358355096|dbj|BAL20268.1| translation initiation factor IF-3 [Bacillus cereus NC7401]
Length = 186
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+EQQKK+K Q+K + +KE+++ ID+HD++ +L+ A KFL+ GDKVK +
Sbjct: 78 GKFRFEQQKKEKEQRKNQKV--ISMKEVRLSPTIDEHDFNTKLRNAIKFLEKGDKVKASI 135
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVP 114
KGR + I ++ RF E+++ E+K R++F++L P
Sbjct: 136 RFKGRAITHKEIGQRVLDRFSEACAEVSTIESKPKMEGRSMFLVLAP 182
>gi|373454412|ref|ZP_09546278.1| translation initiation factor IF-3 [Dialister succinatiphilus YIT
11850]
gi|371935687|gb|EHO63430.1| translation initiation factor IF-3 [Dialister succinatiphilus YIT
11850]
Length = 193
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYRYEQQK+ K +KK +KE+K+ NI+ HD+ V+LK A++FL DG+KVKV +
Sbjct: 87 GKYRYEQQKRDKEAKKKQKV--FQIKEVKLRPNIEDHDFFVKLKNAQRFLGDGNKVKVTI 144
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGE-LASEENKNFRDRNIFIILVP 114
+GRE + E++ RF ++G+ + E+ RN+ +++ P
Sbjct: 145 MFRGREMSHPELGQEVLDRFAKELGDSIVREKPPKLEGRNMTMVIGP 191
>gi|163942309|ref|YP_001647193.1| translation initiation factor IF-3 [Bacillus weihenstephanensis
KBAB4]
gi|423368602|ref|ZP_17346034.1| translation initiation factor IF-3 [Bacillus cereus VD142]
gi|423452143|ref|ZP_17428996.1| translation initiation factor IF-3 [Bacillus cereus BAG5X1-1]
gi|423470776|ref|ZP_17447520.1| translation initiation factor IF-3 [Bacillus cereus BAG6O-2]
gi|423484139|ref|ZP_17460829.1| translation initiation factor IF-3 [Bacillus cereus BAG6X1-2]
gi|423489739|ref|ZP_17466421.1| translation initiation factor IF-3 [Bacillus cereus BtB2-4]
gi|423495462|ref|ZP_17472106.1| translation initiation factor IF-3 [Bacillus cereus CER057]
gi|423497743|ref|ZP_17474360.1| translation initiation factor IF-3 [Bacillus cereus CER074]
gi|423512675|ref|ZP_17489206.1| translation initiation factor IF-3 [Bacillus cereus HuA2-1]
gi|423519257|ref|ZP_17495738.1| translation initiation factor IF-3 [Bacillus cereus HuA2-4]
gi|423521542|ref|ZP_17498015.1| translation initiation factor IF-3 [Bacillus cereus HuA4-10]
gi|423557845|ref|ZP_17534147.1| translation initiation factor IF-3 [Bacillus cereus MC67]
gi|423591451|ref|ZP_17567482.1| translation initiation factor IF-3 [Bacillus cereus VD048]
gi|423598131|ref|ZP_17574131.1| translation initiation factor IF-3 [Bacillus cereus VD078]
gi|423660581|ref|ZP_17635750.1| translation initiation factor IF-3 [Bacillus cereus VDM022]
gi|423670140|ref|ZP_17645169.1| translation initiation factor IF-3 [Bacillus cereus VDM034]
gi|423673653|ref|ZP_17648592.1| translation initiation factor IF-3 [Bacillus cereus VDM062]
gi|163864506|gb|ABY45565.1| translation initiation factor IF-3 [Bacillus weihenstephanensis
KBAB4]
gi|401080128|gb|EJP88418.1| translation initiation factor IF-3 [Bacillus cereus VD142]
gi|401139165|gb|EJQ46728.1| translation initiation factor IF-3 [Bacillus cereus BAG6X1-2]
gi|401142214|gb|EJQ49763.1| translation initiation factor IF-3 [Bacillus cereus BAG5X1-1]
gi|401150369|gb|EJQ57828.1| translation initiation factor IF-3 [Bacillus cereus CER057]
gi|401159614|gb|EJQ66997.1| translation initiation factor IF-3 [Bacillus cereus HuA2-4]
gi|401162223|gb|EJQ69581.1| translation initiation factor IF-3 [Bacillus cereus CER074]
gi|401177744|gb|EJQ84931.1| translation initiation factor IF-3 [Bacillus cereus HuA4-10]
gi|401192382|gb|EJQ99398.1| translation initiation factor IF-3 [Bacillus cereus MC67]
gi|401232819|gb|EJR39317.1| translation initiation factor IF-3 [Bacillus cereus VD048]
gi|401237592|gb|EJR44043.1| translation initiation factor IF-3 [Bacillus cereus VD078]
gi|401297500|gb|EJS03109.1| translation initiation factor IF-3 [Bacillus cereus VDM034]
gi|401302489|gb|EJS08068.1| translation initiation factor IF-3 [Bacillus cereus VDM022]
gi|401310518|gb|EJS15834.1| translation initiation factor IF-3 [Bacillus cereus VDM062]
gi|402431030|gb|EJV63102.1| translation initiation factor IF-3 [Bacillus cereus BtB2-4]
gi|402434514|gb|EJV66552.1| translation initiation factor IF-3 [Bacillus cereus BAG6O-2]
gi|402447599|gb|EJV79449.1| translation initiation factor IF-3 [Bacillus cereus HuA2-1]
Length = 166
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+EQQKK+K Q+K + +KE+++ ID+HD++ +L+ A KFL+ GDKVK +
Sbjct: 58 GKFRFEQQKKEKEQRKNQKV--ISMKEVRLSPTIDEHDFNTKLRNAVKFLEKGDKVKASI 115
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVP 114
KGR + I ++ RF E+++ E+K R++F++L P
Sbjct: 116 RFKGRAITHKEIGQRVLDRFSEACAEVSTIESKPKMEGRSMFLVLAP 162
>gi|395792627|ref|ZP_10472051.1| translation initiation factor IF-3 [Bartonella vinsonii subsp.
arupensis Pm136co]
gi|423713289|ref|ZP_17687549.1| translation initiation factor IF-3 [Bartonella vinsonii subsp.
arupensis OK-94-513]
gi|395423330|gb|EJF89525.1| translation initiation factor IF-3 [Bartonella vinsonii subsp.
arupensis OK-94-513]
gi|395432184|gb|EJF98173.1| translation initiation factor IF-3 [Bartonella vinsonii subsp.
arupensis Pm136co]
Length = 172
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 65/106 (61%), Gaps = 3/106 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y+ QKK +KK +++KE+KM N+D HDY V+LKA +F+ +GDKVK+
Sbjct: 66 LGKLKYQTQKKAAETRKKQKV--IEIKEIKMRPNVDVHDYGVKLKAIHRFIGNGDKVKIT 123
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIIL 112
+ +GRE +++ ++L++R + D E+A E R + +++
Sbjct: 124 LRFRGREMAHQDLGLKLLQRVKEDTSEIAKIESEPKLEGRQMMMVI 169
>gi|270290437|ref|ZP_06196662.1| translation initiation factor IF-3 [Pediococcus acidilactici 7_4]
gi|304384682|ref|ZP_07367028.1| translation initiation factor IF3 [Pediococcus acidilactici DSM
20284]
gi|418068954|ref|ZP_12706234.1| translation initiation factor 3 [Pediococcus acidilactici MA18/5M]
gi|427440021|ref|ZP_18924550.1| translation initiation factor IF-3 [Pediococcus lolii NGRI 0510Q]
gi|270281218|gb|EFA27051.1| translation initiation factor IF-3 [Pediococcus acidilactici 7_4]
gi|304328876|gb|EFL96096.1| translation initiation factor IF3 [Pediococcus acidilactici DSM
20284]
gi|357537687|gb|EHJ21710.1| translation initiation factor 3 [Pediococcus acidilactici MA18/5M]
gi|425787853|dbj|GAC45338.1| translation initiation factor IF-3 [Pediococcus lolii NGRI 0510Q]
Length = 166
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 68/108 (62%), Gaps = 3/108 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYR+EQQKKK+ +KK + +KE+++ ID +D++ +LK A+KFL GDKV+V +
Sbjct: 58 GKYRFEQQKKKREARKKQKT--VSIKEIRLSPTIDTNDFNTKLKNAKKFLGKGDKVRVSI 115
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPN 115
KGR ++I +++ R + ++A E + D R++F++L PN
Sbjct: 116 RFKGRAITHKDIGRKVLERMAEETSDIARIEARPKMDGRSMFLVLAPN 163
>gi|126726282|ref|ZP_01742123.1| translation initiation factor IF-3 [Rhodobacterales bacterium
HTCC2150]
gi|126704145|gb|EBA03237.1| translation initiation factor IF-3 [Rhodobacteraceae bacterium
HTCC2150]
Length = 171
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YEQQK++ +KK +++KE+K N D+HDY V+++ KFL++GDKVK+ +
Sbjct: 64 GKYKYEQQKRESEARKKQKI--IEIKEIKFRPNTDKHDYGVKMRNVFKFLENGDKVKITM 121
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVP 114
+GRE +N+ EL+ R DV EL EN R + +++ P
Sbjct: 122 RFRGREMAHQNLGRELLERVAADVVELGKIENMPKMEGRQMIMMIGP 168
>gi|260575175|ref|ZP_05843175.1| translation initiation factor IF-3 [Rhodobacter sp. SW2]
gi|259022435|gb|EEW25731.1| translation initiation factor IF-3 [Rhodobacter sp. SW2]
Length = 226
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YEQQK++ +KK + ++ KE+K D HDY V++++ KFL++GDKVKV +
Sbjct: 121 GKYKYEQQKREAEARKKQ--HIIETKEIKFRPGTDTHDYDVKMRSVLKFLEEGDKVKVTL 178
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVP 114
+GRE + + +EL+ R DVGE E+ R + +++ P
Sbjct: 179 RFRGREMAHQELGLELLNRVAADVGEAGKVESMPRLEGRQMVMMIGP 225
>gi|338708199|ref|YP_004662400.1| translation initiation factor IF-3 [Zymomonas mobilis subsp.
pomaceae ATCC 29192]
gi|336295003|gb|AEI38110.1| translation initiation factor IF-3 [Zymomonas mobilis subsp.
pomaceae ATCC 29192]
Length = 169
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 66/111 (59%), Gaps = 3/111 (2%)
Query: 5 YFFLSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKV 64
+ + KY+YE QKK +K ++KE+K+ NIDQHDY ++K +FL++GDKV
Sbjct: 60 FLDVGKYKYEAQKKANLARKTQKTQ--EIKEIKLRPNIDQHDYETKMKKVFQFLEEGDKV 117
Query: 65 KVIVNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
K+ + +GRE + +++++R Q D E+A E++ R + +++ P
Sbjct: 118 KITLRFRGREMAHGQLGMQVMQRVQVDTQEVAKVEQHPRMEGRQMLMVVAP 168
>gi|294508833|ref|YP_003572892.1| translation initiation factor IF-3 [Salinibacter ruber M8]
gi|294345162|emb|CBH25940.1| Translation initiation factor IF-3 [Salinibacter ruber M8]
Length = 200
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 73/109 (66%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYRYE+QK+++ ++KKS + M++KEL+ ++HD++ ++ AR+FL+DG+KVK V
Sbjct: 92 GKYRYEKQKEEQRRRKKSKS--MEMKELRFRPRTEEHDFNFKVDHAREFLEDGNKVKAYV 149
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNK 116
KGR+ +++ ++L+RR ++ E+A ++ R + +IL P+K
Sbjct: 150 QFKGRDIVYKDQGMDLLRRMIEELQEIARIDQQPEMEGRRMVMILAPHK 198
>gi|409435661|ref|ZP_11262869.1| Translation initiation factor IF-3 [Rhizobium mesoamericanum
STM3625]
gi|408752419|emb|CCM74016.1| Translation initiation factor IF-3 [Rhizobium mesoamericanum
STM3625]
Length = 143
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y QKK +KK +++KE+KM NID HDY V++KA +F +DGDKVKV
Sbjct: 37 LGKLKYANQKKAAEARKKQ--KIVEVKEIKMRPNIDTHDYEVKMKAMGRFFEDGDKVKVT 94
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE + + ++L+++ + D E A E R + ++L P
Sbjct: 95 LKFRGREMAHQELGMKLLQQVKADTTEYAKVEAEPKLEGRQMMMVLAP 142
>gi|294501488|ref|YP_003565188.1| translation initiation factor IF-3 [Bacillus megaterium QM B1551]
gi|295706836|ref|YP_003599911.1| translation initiation factor IF-3 [Bacillus megaterium DSM 319]
gi|384044675|ref|YP_005492692.1| translation initiation factor IF-3 [Bacillus megaterium WSH-002]
gi|294351425|gb|ADE71754.1| translation initiation factor IF-3 [Bacillus megaterium QM B1551]
gi|294804495|gb|ADF41561.1| translation initiation factor IF-3 [Bacillus megaterium DSM 319]
gi|345442366|gb|AEN87383.1| translation initiation factor IF-3 [Bacillus megaterium WSH-002]
Length = 167
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+RYEQQ+K++ +K ++LKE+++ ID+HD++ +L+ ARKFL+ GDKVK +
Sbjct: 59 GKFRYEQQRKEREARKNQKV--VNLKEVRLSPTIDEHDFNTKLRNARKFLEKGDKVKASI 116
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
KGR + I +++ RF +++S E R++F++L P
Sbjct: 117 RFKGRAITHKGIGQKVLERFSQACEDVSSVESAPKMEGRSMFLVLAP 163
>gi|52081389|ref|YP_080180.1| translation initiation factor IF-3 [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|319647297|ref|ZP_08001519.1| translation initiation factor IF-3 [Bacillus sp. BT1B_CT2]
gi|52004600|gb|AAU24542.1| initiation factor IF-3 [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|317390644|gb|EFV71449.1| translation initiation factor IF-3 [Bacillus sp. BT1B_CT2]
Length = 186
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYR+EQQKK+K +K ++LKE+++ I++HD++ +L+ A KFL+ GDKVK +
Sbjct: 78 GKYRFEQQKKEKEARKNQKI--INLKEVRLSPGIEEHDFNTKLRNAIKFLQKGDKVKASI 135
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I ++ RF E+A+ E K D R++F++L P
Sbjct: 136 RFKGRAITHKEIGQRVLDRFSEACAEVATVETKPKMDGRSMFLVLAP 182
>gi|33862192|ref|NP_893753.1| translation initiation factor IF-3 [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
gi|39931213|sp|Q7TU24.1|IF3_PROMP RecName: Full=Translation initiation factor IF-3
gi|33634410|emb|CAE20095.1| Translation Initiation factor 3 [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
Length = 190
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 62/98 (63%), Gaps = 1/98 (1%)
Query: 28 ANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRR 87
+++ ++KE+KM Y ID+HDY VR+ A +FLK GDKVK V +GRE + N+A L+ +
Sbjct: 92 SHQTEVKEVKMRYKIDKHDYDVRIGQAVRFLKSGDKVKCTVFFRGREIQHSNLAETLLLK 151
Query: 88 FQNDVGELASEENKNFRD-RNIFIILVPNKALLQKAQE 124
ND+ E + + + R+ RN+ + L P K L K +E
Sbjct: 152 MANDLEEQSEVQQRPKREGRNMIMFLSPRKTPLIKKEE 189
>gi|239917950|ref|YP_002957508.1| translation initiation factor 3 [Micrococcus luteus NCTC 2665]
gi|239839157|gb|ACS30954.1| bacterial translation initiation factor 3 (bIF-3) [Micrococcus
luteus NCTC 2665]
Length = 401
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 67/106 (63%), Gaps = 3/106 (2%)
Query: 10 KYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVN 69
KY+YE K + + +K+ N + LKE++ ID+HDY + A+KFL GDKVK I+
Sbjct: 112 KYKYEAAVKAR-ESRKNQVNTV-LKEVRFRLKIDKHDYETKTGHAKKFLSQGDKVKAIIQ 169
Query: 70 LKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
+GRE + + I+L+++F DV EL + E++ +D RN+ +++ P
Sbjct: 170 FRGREQQRPELGIKLLQQFAEDVAELGAVESQPRQDGRNMVMVVGP 215
>gi|395788179|ref|ZP_10467754.1| translation initiation factor IF-3 [Bartonella birtlesii LL-WM9]
gi|395409512|gb|EJF76100.1| translation initiation factor IF-3 [Bartonella birtlesii LL-WM9]
Length = 132
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 65/106 (61%), Gaps = 3/106 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y+ QKK +KK +++KE+KM N+D HDY V+LKA +F+ +GDKVK+
Sbjct: 26 LGKLKYQTQKKAAETRKKQ--KNIEIKEIKMRPNVDVHDYGVKLKAIHRFINNGDKVKIT 83
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIIL 112
+ +GRE +++ ++L++R + D E+A E R + +++
Sbjct: 84 LRFRGREMAHQDLGLKLLQRVKEDTSEIAKIESEPKLEGRQMMMVI 129
>gi|152976958|ref|YP_001376475.1| translation initiation factor IF-3 [Bacillus cytotoxicus NVH
391-98]
gi|152025710|gb|ABS23480.1| translation initiation factor IF-3 [Bacillus cytotoxicus NVH
391-98]
Length = 195
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+EQQKK+K Q+K + +KE+++ ID+HD++ +L+ A KFL GDKVK +
Sbjct: 87 GKFRFEQQKKEKEQRKNQKV--ISMKEVRLSPTIDEHDFNTKLRNALKFLGKGDKVKASI 144
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVP 114
KGR + I ++ RF E+ + E+K R++F+IL P
Sbjct: 145 RFKGRAITHKEIGQRVLDRFAEACAEVGTIESKPKMEGRSMFLILAP 191
>gi|399041536|ref|ZP_10736591.1| translation initiation factor IF-3 [Rhizobium sp. CF122]
gi|398060306|gb|EJL52135.1| translation initiation factor IF-3 [Rhizobium sp. CF122]
Length = 219
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y QKK +KK +++KE+KM NID HDY V++KA +F +DGDKVKV
Sbjct: 113 LGKLKYANQKKAAEARKKQKI--VEVKEIKMRPNIDTHDYEVKMKAMGRFFEDGDKVKVT 170
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE + + ++L+++ + D E A E R + ++L P
Sbjct: 171 LKFRGREMAHQELGMKLLQQVKADTTEYAKVEAEPKLEGRQMMMVLAP 218
>gi|389573825|ref|ZP_10163896.1| translation initiation factor IF-3 [Bacillus sp. M 2-6]
gi|388426395|gb|EIL84209.1| translation initiation factor IF-3 [Bacillus sp. M 2-6]
Length = 154
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+EQQKK+K +K + LKE+++ ID+HD++ +L+ A KFL+ GDKVK +
Sbjct: 46 GKFRFEQQKKEKEARKNQKI--ISLKEVRLSPTIDEHDFNTKLRNAIKFLEKGDKVKASI 103
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I ++ RF E+A+ E K D R++F++L P
Sbjct: 104 RFKGRAITHKEIGQRVLDRFSEACAEVATVETKPKMDGRSMFLMLAP 150
>gi|227817359|ref|YP_002817368.1| translation initiation factor IF-3 [Bacillus anthracis str. CDC
684]
gi|228917214|ref|ZP_04080771.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228929622|ref|ZP_04092640.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228935882|ref|ZP_04098692.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228948300|ref|ZP_04110583.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228987822|ref|ZP_04147931.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228993302|ref|ZP_04153218.1| Translation initiation factor IF-3 [Bacillus pseudomycoides DSM
12442]
gi|228999355|ref|ZP_04158934.1| Translation initiation factor IF-3 [Bacillus mycoides Rock3-17]
gi|229006910|ref|ZP_04164540.1| Translation initiation factor IF-3 [Bacillus mycoides Rock1-4]
gi|229019799|ref|ZP_04176602.1| Translation initiation factor IF-3 [Bacillus cereus AH1273]
gi|229032220|ref|ZP_04188193.1| Translation initiation factor IF-3 [Bacillus cereus AH1271]
gi|229076077|ref|ZP_04209045.1| Translation initiation factor IF-3 [Bacillus cereus Rock4-18]
gi|229087131|ref|ZP_04219281.1| Translation initiation factor IF-3 [Bacillus cereus Rock3-44]
gi|229093672|ref|ZP_04224772.1| Translation initiation factor IF-3 [Bacillus cereus Rock3-42]
gi|229099036|ref|ZP_04229970.1| Translation initiation factor IF-3 [Bacillus cereus Rock3-29]
gi|229105202|ref|ZP_04235851.1| Translation initiation factor IF-3 [Bacillus cereus Rock3-28]
gi|229118066|ref|ZP_04247425.1| Translation initiation factor IF-3 [Bacillus cereus Rock1-3]
gi|229124141|ref|ZP_04253333.1| Translation initiation factor IF-3 [Bacillus cereus 95/8201]
gi|229141300|ref|ZP_04269838.1| Translation initiation factor IF-3 [Bacillus cereus BDRD-ST26]
gi|229158178|ref|ZP_04286245.1| Translation initiation factor IF-3 [Bacillus cereus ATCC 4342]
gi|229163566|ref|ZP_04291516.1| Translation initiation factor IF-3 [Bacillus cereus R309803]
gi|229186831|ref|ZP_04313986.1| Translation initiation factor IF-3 [Bacillus cereus BGSC 6E1]
gi|229198723|ref|ZP_04325421.1| Translation initiation factor IF-3 [Bacillus cereus m1293]
gi|386738471|ref|YP_006211652.1| translation initiation factor IF-3 [Bacillus anthracis str. H9401]
gi|407707090|ref|YP_006830675.1| thioredoxin family protein [Bacillus thuringiensis MC28]
gi|38372270|sp|Q81L15.2|IF3_BACAN RecName: Full=Translation initiation factor IF-3
gi|61213087|sp|Q633M1.2|IF3_BACCZ RecName: Full=Translation initiation factor IF-3
gi|61213121|sp|Q72ZG2.2|IF3_BACC1 RecName: Full=Translation initiation factor IF-3
gi|227003475|gb|ACP13218.1| translation initiation factor IF-3 [Bacillus anthracis str. CDC
684]
gi|228584745|gb|EEK42865.1| Translation initiation factor IF-3 [Bacillus cereus m1293]
gi|228596568|gb|EEK54233.1| Translation initiation factor IF-3 [Bacillus cereus BGSC 6E1]
gi|228619948|gb|EEK76824.1| Translation initiation factor IF-3 [Bacillus cereus R309803]
gi|228625136|gb|EEK81896.1| Translation initiation factor IF-3 [Bacillus cereus ATCC 4342]
gi|228642081|gb|EEK98374.1| Translation initiation factor IF-3 [Bacillus cereus BDRD-ST26]
gi|228659443|gb|EEL15091.1| Translation initiation factor IF-3 [Bacillus cereus 95/8201]
gi|228665289|gb|EEL20772.1| Translation initiation factor IF-3 [Bacillus cereus Rock1-3]
gi|228678128|gb|EEL32356.1| Translation initiation factor IF-3 [Bacillus cereus Rock3-28]
gi|228684264|gb|EEL38208.1| Translation initiation factor IF-3 [Bacillus cereus Rock3-29]
gi|228689759|gb|EEL43566.1| Translation initiation factor IF-3 [Bacillus cereus Rock3-42]
gi|228696199|gb|EEL49034.1| Translation initiation factor IF-3 [Bacillus cereus Rock3-44]
gi|228706940|gb|EEL59145.1| Translation initiation factor IF-3 [Bacillus cereus Rock4-18]
gi|228729000|gb|EEL80003.1| Translation initiation factor IF-3 [Bacillus cereus AH1271]
gi|228741524|gb|EEL91721.1| Translation initiation factor IF-3 [Bacillus cereus AH1273]
gi|228754310|gb|EEM03725.1| Translation initiation factor IF-3 [Bacillus mycoides Rock1-4]
gi|228760300|gb|EEM09267.1| Translation initiation factor IF-3 [Bacillus mycoides Rock3-17]
gi|228766370|gb|EEM15013.1| Translation initiation factor IF-3 [Bacillus pseudomycoides DSM
12442]
gi|228771870|gb|EEM20327.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228811287|gb|EEM57625.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228823650|gb|EEM69472.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228830009|gb|EEM75628.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228842415|gb|EEM87506.1| Translation initiation factor IF-3 [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|384388323|gb|AFH85984.1| Translation initiation factor IF-3 [Bacillus anthracis str. H9401]
gi|407384775|gb|AFU15276.1| translation initiation factor IF-3 [Bacillus thuringiensis MC28]
Length = 167
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+EQQKK+K Q+K + +KE+++ ID+HD++ +L+ A KFL+ GDKVK +
Sbjct: 59 GKFRFEQQKKEKEQRKNQKV--ISMKEVRLSPTIDEHDFNTKLRNAIKFLEKGDKVKASI 116
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVP 114
KGR + I ++ RF E+++ E+K R++F++L P
Sbjct: 117 RFKGRAITHKEIGQRVLDRFSEACAEVSTIESKPKMEGRSMFLVLAP 163
>gi|401564791|ref|ZP_10805658.1| translation initiation factor IF-3 [Selenomonas sp. FOBRC6]
gi|400188485|gb|EJO22647.1| translation initiation factor IF-3 [Selenomonas sp. FOBRC6]
Length = 187
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 76/126 (60%), Gaps = 8/126 (6%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+RYEQQK++K +KK + +KE+K+ NID+HD++V+LK A +F+++G+KVKV +
Sbjct: 59 GKFRYEQQKREKEAKKKQKT--ISIKEVKLRPNIDEHDFNVKLKNALRFVEEGNKVKVTI 116
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKALLQKAQEP-- 125
+GRE + ++ R + EL + E +N+ +IL P +QK +P
Sbjct: 117 MFRGRELSHPELGRAVLDRVAERMTELVTIERGAKLEGKNMTMILSPK---VQKPAKPVK 173
Query: 126 PKKKDK 131
P K+DK
Sbjct: 174 PAKEDK 179
>gi|423395149|ref|ZP_17372350.1| translation initiation factor IF-3 [Bacillus cereus BAG2X1-1]
gi|423406009|ref|ZP_17383158.1| translation initiation factor IF-3 [Bacillus cereus BAG2X1-3]
gi|401655920|gb|EJS73448.1| translation initiation factor IF-3 [Bacillus cereus BAG2X1-1]
gi|401660678|gb|EJS78156.1| translation initiation factor IF-3 [Bacillus cereus BAG2X1-3]
Length = 166
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+EQQKK+K Q+K + +KE+++ ID+HD++ +L+ A KFL+ GDKVK +
Sbjct: 58 GKFRFEQQKKEKEQRKNQKV--ISMKEVRLSPTIDEHDFNTKLRNAIKFLEKGDKVKASI 115
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVP 114
KGR + I ++ RF E+++ E+K R++F++L P
Sbjct: 116 RFKGRAITHKEIGQRVLDRFSEACAEVSTIESKPKMEGRSMFLVLAP 162
>gi|313673283|ref|YP_004051394.1| bacterial translation initiation factor 3 (bif-3) [Calditerrivibrio
nitroreducens DSM 19672]
gi|312940039|gb|ADR19231.1| bacterial translation initiation factor 3 (bIF-3) [Calditerrivibrio
nitroreducens DSM 19672]
Length = 175
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Query: 29 NRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRF 88
N ++ KELK+ NID+HDY V+LK R+FL+DGDKVK++V KGRE F I+L+ R
Sbjct: 87 NMIETKELKLRPNIDEHDYDVKLKHIRRFLEDGDKVKLVVRFKGRETMFGEHGIDLLNRI 146
Query: 89 QNDVGELASEENK-NFRDRNIFIILVP 114
D+ +L E K + R +++ P
Sbjct: 147 TADLQDLCVVEKKPEMQGRQQVMVIAP 173
>gi|165871448|ref|ZP_02216095.1| translation initiation factor IF-3 [Bacillus anthracis str. A0488]
gi|196042362|ref|ZP_03109632.1| translation initiation factor IF-3 [Bacillus cereus NVH0597-99]
gi|196047724|ref|ZP_03114926.1| translation initiation factor IF-3 [Bacillus cereus 03BB108]
gi|217962054|ref|YP_002340624.1| translation initiation factor IF-3 [Bacillus cereus AH187]
gi|218905802|ref|YP_002453636.1| translation initiation factor IF-3 [Bacillus cereus AH820]
gi|254686932|ref|ZP_05150790.1| translation initiation factor IF-3 [Bacillus anthracis str.
CNEVA-9066]
gi|254724496|ref|ZP_05186279.1| translation initiation factor IF-3 [Bacillus anthracis str. A1055]
gi|254754682|ref|ZP_05206717.1| translation initiation factor IF-3 [Bacillus anthracis str. Vollum]
gi|254757514|ref|ZP_05209541.1| translation initiation factor IF-3 [Bacillus anthracis str.
Australia 94]
gi|376268503|ref|YP_005121215.1| Translation initiation factor 3 [Bacillus cereus F837/76]
gi|402555298|ref|YP_006596569.1| translation initiation factor IF-3 [Bacillus cereus FRI-35]
gi|421509324|ref|ZP_15956231.1| translation initiation factor IF-3 [Bacillus anthracis str. UR-1]
gi|421639187|ref|ZP_16079780.1| translation initiation factor IF-3 [Bacillus anthracis str. BF1]
gi|423355056|ref|ZP_17332681.1| translation initiation factor IF-3 [Bacillus cereus IS075]
gi|423373476|ref|ZP_17350815.1| translation initiation factor IF-3 [Bacillus cereus AND1407]
gi|423377582|ref|ZP_17354866.1| translation initiation factor IF-3 [Bacillus cereus BAG1O-2]
gi|423389120|ref|ZP_17366346.1| translation initiation factor IF-3 [Bacillus cereus BAG1X1-3]
gi|423400579|ref|ZP_17377752.1| translation initiation factor IF-3 [Bacillus cereus BAG2X1-2]
gi|423417515|ref|ZP_17394604.1| translation initiation factor IF-3 [Bacillus cereus BAG3X2-1]
gi|423440689|ref|ZP_17417595.1| translation initiation factor IF-3 [Bacillus cereus BAG4X2-1]
gi|423449141|ref|ZP_17426020.1| translation initiation factor IF-3 [Bacillus cereus BAG5O-1]
gi|423457189|ref|ZP_17433986.1| translation initiation factor IF-3 [Bacillus cereus BAG5X2-1]
gi|423463754|ref|ZP_17440522.1| translation initiation factor IF-3 [Bacillus cereus BAG6O-1]
gi|423478712|ref|ZP_17455427.1| translation initiation factor IF-3 [Bacillus cereus BAG6X1-1]
gi|423533106|ref|ZP_17509524.1| translation initiation factor IF-3 [Bacillus cereus HuB2-9]
gi|423541630|ref|ZP_17518021.1| translation initiation factor IF-3 [Bacillus cereus HuB4-10]
gi|423547861|ref|ZP_17524219.1| translation initiation factor IF-3 [Bacillus cereus HuB5-5]
gi|423549688|ref|ZP_17526015.1| translation initiation factor IF-3 [Bacillus cereus ISP3191]
gi|423570802|ref|ZP_17547047.1| translation initiation factor IF-3 [Bacillus cereus MSX-A12]
gi|423573744|ref|ZP_17549863.1| translation initiation factor IF-3 [Bacillus cereus MSX-D12]
gi|423603748|ref|ZP_17579641.1| translation initiation factor IF-3 [Bacillus cereus VD102]
gi|423615040|ref|ZP_17590874.1| translation initiation factor IF-3 [Bacillus cereus VD115]
gi|423622350|ref|ZP_17598128.1| translation initiation factor IF-3 [Bacillus cereus VD148]
gi|164712745|gb|EDR18275.1| translation initiation factor IF-3 [Bacillus anthracis str. A0488]
gi|196021445|gb|EDX60150.1| translation initiation factor IF-3 [Bacillus cereus 03BB108]
gi|196026806|gb|EDX65443.1| translation initiation factor IF-3 [Bacillus cereus NVH0597-99]
gi|217065168|gb|ACJ79418.1| translation initiation factor IF-3 [Bacillus cereus AH187]
gi|218536199|gb|ACK88597.1| translation initiation factor IF-3 [Bacillus cereus AH820]
gi|364514303|gb|AEW57702.1| Translation initiation factor 3 [Bacillus cereus F837/76]
gi|401085233|gb|EJP93476.1| translation initiation factor IF-3 [Bacillus cereus IS075]
gi|401096440|gb|EJQ04487.1| translation initiation factor IF-3 [Bacillus cereus AND1407]
gi|401107794|gb|EJQ15739.1| translation initiation factor IF-3 [Bacillus cereus BAG3X2-1]
gi|401128590|gb|EJQ36279.1| translation initiation factor IF-3 [Bacillus cereus BAG5O-1]
gi|401148966|gb|EJQ56449.1| translation initiation factor IF-3 [Bacillus cereus BAG5X2-1]
gi|401171163|gb|EJQ78396.1| translation initiation factor IF-3 [Bacillus cereus HuB4-10]
gi|401178298|gb|EJQ85478.1| translation initiation factor IF-3 [Bacillus cereus HuB5-5]
gi|401190484|gb|EJQ97526.1| translation initiation factor IF-3 [Bacillus cereus ISP3191]
gi|401203429|gb|EJR10268.1| translation initiation factor IF-3 [Bacillus cereus MSX-A12]
gi|401213843|gb|EJR20580.1| translation initiation factor IF-3 [Bacillus cereus MSX-D12]
gi|401246512|gb|EJR52859.1| translation initiation factor IF-3 [Bacillus cereus VD102]
gi|401261490|gb|EJR67650.1| translation initiation factor IF-3 [Bacillus cereus VD148]
gi|401261896|gb|EJR68047.1| translation initiation factor IF-3 [Bacillus cereus VD115]
gi|401638431|gb|EJS56181.1| translation initiation factor IF-3 [Bacillus cereus BAG1O-2]
gi|401642395|gb|EJS60106.1| translation initiation factor IF-3 [Bacillus cereus BAG1X1-3]
gi|401655303|gb|EJS72837.1| translation initiation factor IF-3 [Bacillus cereus BAG2X1-2]
gi|401796508|gb|AFQ10367.1| translation initiation factor IF-3 [Bacillus cereus FRI-35]
gi|401820776|gb|EJT19939.1| translation initiation factor IF-3 [Bacillus anthracis str. UR-1]
gi|402418820|gb|EJV51109.1| translation initiation factor IF-3 [Bacillus cereus BAG4X2-1]
gi|402421298|gb|EJV53558.1| translation initiation factor IF-3 [Bacillus cereus BAG6O-1]
gi|402426743|gb|EJV58858.1| translation initiation factor IF-3 [Bacillus cereus BAG6X1-1]
gi|402464339|gb|EJV96035.1| translation initiation factor IF-3 [Bacillus cereus HuB2-9]
gi|403393606|gb|EJY90849.1| translation initiation factor IF-3 [Bacillus anthracis str. BF1]
Length = 166
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+EQQKK+K Q+K + +KE+++ ID+HD++ +L+ A KFL+ GDKVK +
Sbjct: 58 GKFRFEQQKKEKEQRKNQKV--ISMKEVRLSPTIDEHDFNTKLRNAIKFLEKGDKVKASI 115
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVP 114
KGR + I ++ RF E+++ E+K R++F++L P
Sbjct: 116 RFKGRAITHKEIGQRVLDRFSEACAEVSTIESKPKMEGRSMFLVLAP 162
>gi|335357143|ref|ZP_08549013.1| translation initiation factor IF-3 [Lactobacillus animalis KCTC
3501]
Length = 166
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 69/107 (64%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYR+E QKK++ +KK +++KE+++ ID +D++ ++K ARKFL GDKVKV +
Sbjct: 58 GKYRFELQKKQREARKKQKV--INVKEVRLSPTIDTNDFNTKVKNARKFLTKGDKVKVSI 115
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I E++ RF + ++A+ E+K D R++F++L P
Sbjct: 116 RFKGRAITHKEIGREVLDRFAAETDDVATVESKAKMDGRSMFLMLAP 162
>gi|407978349|ref|ZP_11159181.1| translation initiation factor IF-3 [Bacillus sp. HYC-10]
gi|407415117|gb|EKF36730.1| translation initiation factor IF-3 [Bacillus sp. HYC-10]
Length = 154
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+EQQKK+K +K + LKE+++ ID+HD++ +L+ A KFL+ GDKVK +
Sbjct: 46 GKFRFEQQKKEKEARKNQKI--ISLKEVRLSPTIDEHDFNTKLRNAIKFLEKGDKVKASI 103
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I ++ RF E+A+ E K D R++F++L P
Sbjct: 104 RFKGRAITHKEIGQRVLDRFSEACAEVATVETKPKMDGRSMFLMLAP 150
>gi|379718618|ref|YP_005310749.1| protein InfC [Paenibacillus mucilaginosus 3016]
gi|378567290|gb|AFC27600.1| InfC [Paenibacillus mucilaginosus 3016]
Length = 154
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+RYE QKK+K +K +DLKE+++ ID+HD+ +L+ KFL DGDKVK+ V
Sbjct: 46 GKFRYETQKKEKEARKNQKI--VDLKEIRLSATIDEHDFQTKLRNVEKFLSDGDKVKLSV 103
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVP 114
+GRE +I +++ R V EL E + R++ +IL P
Sbjct: 104 RFRGREIAHASIGQKVLERMAATVEELCVVERRPKLEGRSMIMILAP 150
>gi|452975445|gb|EME75264.1| translation initiation factor IF-3 [Bacillus sonorensis L12]
Length = 166
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYR+EQQKK+K +K ++LKE+++ I++HD++ +L+ A KFL+ GDKVK +
Sbjct: 58 GKYRFEQQKKEKEARKNQKI--INLKEVRLSPGIEEHDFNTKLRNAIKFLQKGDKVKASI 115
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I ++ RF E+A+ E K D R++F++L P
Sbjct: 116 RFKGRAITHKEIGQRVLDRFSEACAEVATVETKPKMDGRSMFLVLAP 162
>gi|350267065|ref|YP_004878372.1| translation initiation factor IF-3 [Bacillus subtilis subsp.
spizizenii TU-B-10]
gi|349599952|gb|AEP87740.1| translation initiation factor IF-3 [Bacillus subtilis subsp.
spizizenii TU-B-10]
Length = 155
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+EQQKK+K +K ++LKE+++ ID+HD++ +L+ A KFL+ GDKVK +
Sbjct: 46 GKFRFEQQKKEKEARKNQKI--INLKEVRLSPTIDEHDFNTKLRNAIKFLEKGDKVKASI 103
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I ++ RF E+A+ E K D R++F++L P
Sbjct: 104 RFKGRAITHKEIGQRVLDRFSEACAEVATVETKPKMDGRSMFLMLAP 150
>gi|429757443|ref|ZP_19289979.1| translation initiation factor IF-3 [Actinomyces sp. oral taxon 181
str. F0379]
gi|429175113|gb|EKY16566.1| translation initiation factor IF-3 [Actinomyces sp. oral taxon 181
str. F0379]
Length = 224
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YE +K + ++ A + LKE++ ID HD+SV+ +FL GDKVKV++
Sbjct: 73 GKYKYEAAQKARDARRNQANTQ--LKEIRFRLKIDDHDFSVKKGHVERFLSAGDKVKVMI 130
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + L++R +VGELA+ E+ +D RN+ ++L P K
Sbjct: 131 MFRGREQSRPEAGVRLLQRLAEEVGELATVESMPRQDGRNMTMVLAPTK 179
>gi|83815747|ref|YP_446894.1| translation initiation factor IF-3 [Salinibacter ruber DSM 13855]
gi|83757141|gb|ABC45254.1| translation initiation factor IF-3 [Salinibacter ruber DSM 13855]
Length = 153
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 73/109 (66%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYRYE+QK+++ ++KKS + M++KEL+ ++HD++ ++ AR+FL+DG+KVK V
Sbjct: 45 GKYRYEKQKEEQRRRKKSKS--MEMKELRFRPRTEEHDFNFKVDHAREFLEDGNKVKAYV 102
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNK 116
KGR+ +++ ++L+RR ++ E+A ++ R + +IL P+K
Sbjct: 103 QFKGRDIVYKDQGMDLLRRMIEELQEIARIDQQPEMEGRRMVMILAPHK 151
>gi|163867351|ref|YP_001608545.1| translation initiation factor IF-3 [Bartonella tribocorum CIP
105476]
gi|189028351|sp|A9ILC8.1|IF3_BART1 RecName: Full=Translation initiation factor IF-3
gi|161016992|emb|CAK00550.1| translation initiation factor IF-3 [Bartonella tribocorum CIP
105476]
Length = 172
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 65/108 (60%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y+ QKK +KK +++KE+K+ N+D HDY V+LKA +F+ GDKVK+
Sbjct: 66 LGKLKYQTQKKAAETRKKQKV--IEIKEIKVRPNVDVHDYGVKLKAIHRFIDHGDKVKIT 123
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE +++ ++L++R + D E+A E R + +++ P
Sbjct: 124 LRFRGREMAHQDLGLKLLQRVKEDTSEIAKIELEPKLEGRQMMMVIAP 171
>gi|288959314|ref|YP_003449655.1| translation initiation factor IF-3 [Azospirillum sp. B510]
gi|288911622|dbj|BAI73111.1| translation initiation factor IF-3 [Azospirillum sp. B510]
Length = 187
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 69/107 (64%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE QKK +KK +++KE+K+ NID +DY V+++AAR+FL++GDKVKV +
Sbjct: 82 GKFKYEAQKKANEARKKQKI--IEVKEIKLRPNIDDNDYDVKMRAARRFLEEGDKVKVTM 139
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE +++ + ++ R ++ + ELA E+ R + ++L P
Sbjct: 140 RFRGREMAHQDLGMNVLVRVRDALDELAKVEQMPKLEGRQMIMVLAP 186
>gi|345023441|ref|ZP_08787054.1| translation initiation factor IF-3 [Ornithinibacillus scapharcae
TW25]
Length = 168
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+RYEQQKK+K +K +++KE++ I HD+ +LK ARKFL+ GDKVK V
Sbjct: 59 GKFRYEQQKKEKEARKNQKI--INVKEVRFTPGIGAHDFETKLKNARKFLEKGDKVKAAV 116
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVP 114
+GR + + E++ RF V ++A+ E+K RN+F++L P
Sbjct: 117 RFRGRAITHKELGQEVLDRFAEAVKDIATIESKPKMEGRNMFMMLAP 163
>gi|422325401|ref|ZP_16406437.1| hypothetical protein HMPREF0737_01547 [Rothia mucilaginosa M508]
gi|353343405|gb|EHB87723.1| hypothetical protein HMPREF0737_01547 [Rothia mucilaginosa M508]
Length = 284
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 76/130 (58%), Gaps = 5/130 (3%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YE K + +KK A N + LKE++ ID HDY ++ AR+FL GDKVK ++
Sbjct: 131 GKYKYEAAIKARESRKKQA-NAV-LKEIRFRLKIDTHDYETKVGHARRFLSGGDKVKAMI 188
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP--NKALLQKAQEP 125
+GRE + + + L+ R ++ E+++ E++ +D RN+ ++L P KA ++ Q
Sbjct: 189 QFRGREQQRPEMGVRLLERLAAELAEVSTVESRPRQDGRNMVMVLAPLRGKAEARREQGA 248
Query: 126 PKKKDKQVVD 135
+K ++ +D
Sbjct: 249 GGRKGRERID 258
>gi|212638371|ref|YP_002314891.1| translation initiation factor 3 [Anoxybacillus flavithermus WK1]
gi|212559851|gb|ACJ32906.1| Translation initiation factor 3 (IF-3) [Anoxybacillus flavithermus
WK1]
Length = 180
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+EQQKK+K +KK +++KE+++ I++HD++ +L+ ARKFL+ GDKVK +
Sbjct: 72 GKFRFEQQKKEKEARKKQKV--INVKEIRLSPTIEEHDFNTKLRNARKFLEKGDKVKATI 129
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I ++ RF ++ + E D R++F++L P
Sbjct: 130 RFKGRAITHKEIGQRVLDRFAEACADIGTVETAPKMDGRSMFLVLAP 176
>gi|83309440|ref|YP_419704.1| translation initiation factor 3 [Magnetospirillum magneticum AMB-1]
gi|82944281|dbj|BAE49145.1| Translation initiation factor 3 [Magnetospirillum magneticum AMB-1]
gi|452963667|gb|EME68728.1| translation initiation factor IF-3 [Magnetospirillum sp. SO-1]
Length = 173
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 63/91 (69%), Gaps = 2/91 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE QKKK +KK +++KE+K+ NID HDY V++++ RKFL++GDKVKV +
Sbjct: 68 GKFKYEDQKKKNAARKKQKV--IEVKEVKLRPNIDDHDYDVKMRSMRKFLEEGDKVKVTL 125
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEE 99
+GRE +++ ++++ R ++D+ +L E
Sbjct: 126 RFRGRELAHQDLGMKVLERVRDDLEDLGKVE 156
>gi|383642840|ref|ZP_09955246.1| translation initiation factor IF-3 [Sphingomonas elodea ATCC 31461]
Length = 134
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 64/111 (57%), Gaps = 3/111 (2%)
Query: 5 YFFLSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKV 64
+ + K++YE QKK +K ++KE+KM NID HDY V+++ KF+ +GDKV
Sbjct: 25 FLDVGKFKYEAQKKANLARKTQKTQ--EIKEIKMRPNIDDHDYDVKMRNVLKFIGEGDKV 82
Query: 65 KVIVNLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVP 114
K+ + +GRE + ++L++R Q D E+A E+ R + ++L P
Sbjct: 83 KITLRFRGRELSHGQLGMQLLQRVQQDAAEVAKVESYPRMEGRQMLMVLSP 133
>gi|259046988|ref|ZP_05737389.1| translation initiation factor IF-3 [Granulicatella adiacens ATCC
49175]
gi|259036431|gb|EEW37686.1| translation initiation factor IF-3 [Granulicatella adiacens ATCC
49175]
Length = 167
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 68/107 (63%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYR+EQQKK++ +K +++KE+++ ID++D++ +LKAA KFL+ GDKVK +
Sbjct: 59 GKYRFEQQKKEREARKNQKV--INIKEVRLSPTIDENDFNTKLKAAIKFLEKGDKVKASI 116
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I +++ R V E+A+ E K D R++F++L P
Sbjct: 117 RFKGRAITHKEIGQKVLERLAEQVSEIATVEQKAKMDGRSMFLMLAP 163
>gi|148241189|ref|YP_001226346.1| translation initiation factor IF-3 [Synechococcus sp. RCC307]
gi|166233786|sp|A5GQ34.1|IF3_SYNR3 RecName: Full=Translation initiation factor IF-3
gi|147849499|emb|CAK26993.1| Translation initiation factor IF-3 [Synechococcus sp. RCC307]
Length = 215
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 71/114 (62%), Gaps = 3/114 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+++EQ+KK K +KKS ++ ++KE+KM Y ID HDY VR+ A +FLK GDKVK V
Sbjct: 75 GKFKFEQEKKAKEAKKKS--HQTEVKEVKMRYKIDAHDYQVRIGQAVRFLKAGDKVKCTV 132
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNKALLQK 121
+GRE + +A +L+ R D+ E A + R+ RN+ + L P K LQK
Sbjct: 133 IFRGREIQHTALAEKLLMRMAKDLEESAEVQQPPKREGRNMIMFLGPRKTPLQK 186
>gi|337745031|ref|YP_004639193.1| protein InfC [Paenibacillus mucilaginosus KNP414]
gi|336296220|gb|AEI39323.1| InfC [Paenibacillus mucilaginosus KNP414]
Length = 166
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+RYE QKK+K +K +DLKE+++ ID+HD+ +L+ KFL DGDKVK+ V
Sbjct: 58 GKFRYETQKKEKEARKNQKI--VDLKEIRLSATIDEHDFQTKLRNVEKFLSDGDKVKLSV 115
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVP 114
+GRE +I +++ R V EL E + R++ +IL P
Sbjct: 116 RFRGREIAHASIGQKVLERMAATVEELCVVERRPKLEGRSMIMILAP 162
>gi|259416882|ref|ZP_05740802.1| translation initiation factor IF-3 [Silicibacter sp. TrichCH4B]
gi|259348321|gb|EEW60098.1| translation initiation factor IF-3 [Silicibacter sp. TrichCH4B]
Length = 143
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YEQQK++ +KK +++KE+K N D HDY V+++ KFL++GDKVKV +
Sbjct: 35 GKFKYEQQKRESEARKKQKI--IEVKEVKFRPNTDTHDYDVKMRNVIKFLENGDKVKVTL 92
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVP 114
+GRE +N+ EL++R D+ EL EN R + +++ P
Sbjct: 93 RFRGREMAHQNLGRELLQRVAEDIKELGKVENMPKMEGRQMIMMIGP 139
>gi|428210862|ref|YP_007084006.1| translation initiation factor 3 (bIF-3) [Oscillatoria acuminata PCC
6304]
gi|427999243|gb|AFY80086.1| bacterial translation initiation factor 3 (bIF-3) [Oscillatoria
acuminata PCC 6304]
Length = 177
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 72/109 (66%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY++EQ+KK + + K + ++KE+KM Y I++HDY+VRL A++FLK GDKVK +
Sbjct: 71 GKYKFEQEKKAR--EAKKKQHTAEVKEVKMRYKIEEHDYNVRLNQAQRFLKVGDKVKATI 128
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + ++A EL++R D+ E+A + ++ R++ ++L P K
Sbjct: 129 TFRGREIQHTDLAEELLKRMATDLQEVAEVQQAPKKEGRSMMMLLSPKK 177
>gi|349687395|ref|ZP_08898537.1| translation initiation factor IF-3 [Gluconacetobacter oboediens
174Bp2]
Length = 173
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 71/107 (66%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YEQQKK+ +KK +++KE+K+ NID++DY V+++A + F+ +GDKVKV +
Sbjct: 68 GKFKYEQQKKRNEARKKQKV--IEIKEVKVRPNIDENDYQVKMRAMKTFIGEGDKVKVTL 125
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVP 114
+GRE +++ ++++ R + ++ E+A E+ +R + ++L P
Sbjct: 126 RFRGREMAHQDLGVKVLERIRAEMDEIAKVEHMPKLENRQMIMVLAP 172
>gi|317495087|ref|ZP_07953458.1| translation initiation factor IF-3 [Gemella morbillorum M424]
gi|316914794|gb|EFV36269.1| translation initiation factor IF-3 [Gemella morbillorum M424]
Length = 175
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 66/108 (61%), Gaps = 3/108 (2%)
Query: 10 KYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVN 69
K+++EQQKK+K +KK + KE+++ I++HD+ +LK ARKFL DKVKV +
Sbjct: 68 KFKFEQQKKEKEARKKQKI--VTTKEIRLSPTIEKHDFETKLKNARKFLAKEDKVKVSIR 125
Query: 70 LKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVPNK 116
KGR + I +++ F N+ ++A+ E K R++F++L P K
Sbjct: 126 FKGRAITHKEIGQKVLENFSNEASDIATVEQKPKMEGRSMFLVLAPKK 173
>gi|395791631|ref|ZP_10471087.1| translation initiation factor IF-3 [Bartonella alsatica IBS 382]
gi|395407934|gb|EJF74554.1| translation initiation factor IF-3 [Bartonella alsatica IBS 382]
Length = 132
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 65/106 (61%), Gaps = 3/106 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y+ QKK +KK +++KE+KM N+D HDY V+LKA +F+ +GDKVK+
Sbjct: 26 LGKLKYQTQKKAAETRKKQKI--IEIKEIKMRPNVDVHDYGVKLKAIHRFIGNGDKVKIT 83
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIIL 112
+ +GRE +++ ++L++R + D E+A E R + +++
Sbjct: 84 LRFRGREMAHQDLGLKLLQRVKEDTSEIAKIESEPKLEGRQMMMVI 129
>gi|121535636|ref|ZP_01667442.1| translation initiation factor IF-3 [Thermosinus carboxydivorans
Nor1]
gi|121305806|gb|EAX46742.1| translation initiation factor IF-3 [Thermosinus carboxydivorans
Nor1]
Length = 167
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 69/107 (64%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YEQQK+ K +KK + +KE+K+ NI++HD++V++K A++FL+DGDKVKV +
Sbjct: 59 GKFKYEQQKRDKEAKKKQKI--ITVKEVKIRPNIEEHDFNVKIKHAQRFLEDGDKVKVTI 116
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE + +++ + N++ +A+ E +N+ +IL P
Sbjct: 117 MFRGRELSHPELGKQVLTKMANELKNIAAVEREPKLEGKNMIMILAP 163
>gi|221310829|ref|ZP_03592676.1| translation initiation factor IF-3 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221315154|ref|ZP_03596959.1| translation initiation factor IF-3 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221320072|ref|ZP_03601366.1| translation initiation factor IF-3 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221324354|ref|ZP_03605648.1| translation initiation factor IF-3 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|296331561|ref|ZP_06874030.1| translation initiation factor IF-3 [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305675480|ref|YP_003867152.1| translation initiation factor IF-3 [Bacillus subtilis subsp.
spizizenii str. W23]
gi|308174583|ref|YP_003921288.1| initiation factor IF-3 [Bacillus amyloliquefaciens DSM 7]
gi|321312421|ref|YP_004204708.1| translation initiation factor IF-3 [Bacillus subtilis BSn5]
gi|384160418|ref|YP_005542491.1| translation initiation factor IF-3 [Bacillus amyloliquefaciens
TA208]
gi|384165355|ref|YP_005546734.1| translation initiation factor IF-3 [Bacillus amyloliquefaciens LL3]
gi|384169498|ref|YP_005550876.1| translation initiation factor IF-3 [Bacillus amyloliquefaciens XH7]
gi|384176476|ref|YP_005557861.1| translation initiation factor IF-3 [Bacillus subtilis subsp.
subtilis str. RO-NN-1]
gi|386759453|ref|YP_006232669.1| translation initiation factor IF-3 [Bacillus sp. JS]
gi|402777043|ref|YP_006630987.1| initiation factor IF-3 [Bacillus subtilis QB928]
gi|418031927|ref|ZP_12670410.1| translation initiation factor IF-3 [Bacillus subtilis subsp.
subtilis str. SC-8]
gi|428280364|ref|YP_005562099.1| translation initiation factor IF-3 [Bacillus subtilis subsp. natto
BEST195]
gi|430758652|ref|YP_007208608.1| translation initiation factor InfC [Bacillus subtilis subsp.
subtilis str. BSP1]
gi|443632220|ref|ZP_21116400.1| translation initiation factor IF-3 [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
gi|449095332|ref|YP_007427823.1| translation initiation factor IF-3 [Bacillus subtilis XF-1]
gi|452915316|ref|ZP_21963942.1| translation initiation factor IF-3 [Bacillus subtilis MB73/2]
gi|291485321|dbj|BAI86396.1| translation initiation factor IF-3 [Bacillus subtilis subsp. natto
BEST195]
gi|296151156|gb|EFG92036.1| translation initiation factor IF-3 [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305413724|gb|ADM38843.1| translation initiation factor IF-3 [Bacillus subtilis subsp.
spizizenii str. W23]
gi|307607447|emb|CBI43818.1| initiation factor IF-3 [Bacillus amyloliquefaciens DSM 7]
gi|320018695|gb|ADV93681.1| translation initiation factor IF-3 [Bacillus subtilis BSn5]
gi|328554506|gb|AEB24998.1| translation initiation factor IF-3 [Bacillus amyloliquefaciens
TA208]
gi|328912910|gb|AEB64506.1| Translation initiation factor IF-3 [Bacillus amyloliquefaciens LL3]
gi|341828777|gb|AEK90028.1| translation initiation factor IF-3 [Bacillus amyloliquefaciens XH7]
gi|349595700|gb|AEP91887.1| translation initiation factor IF-3 [Bacillus subtilis subsp.
subtilis str. RO-NN-1]
gi|351470790|gb|EHA30911.1| translation initiation factor IF-3 [Bacillus subtilis subsp.
subtilis str. SC-8]
gi|384932735|gb|AFI29413.1| translation initiation factor IF-3 [Bacillus sp. JS]
gi|402482223|gb|AFQ58732.1| Initiation factor IF-3 [Bacillus subtilis QB928]
gi|407960896|dbj|BAM54136.1| translation initiation factor IF-3 [Bacillus subtilis BEST7613]
gi|407965726|dbj|BAM58965.1| translation initiation factor IF-3 [Bacillus subtilis BEST7003]
gi|430023172|gb|AGA23778.1| Translation initiation factor InfC [Bacillus subtilis subsp.
subtilis str. BSP1]
gi|443348335|gb|ELS62392.1| translation initiation factor IF-3 [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
gi|449029247|gb|AGE64486.1| translation initiation factor IF-3 [Bacillus subtilis XF-1]
gi|452115664|gb|EME06060.1| translation initiation factor IF-3 [Bacillus subtilis MB73/2]
Length = 167
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+EQQKK+K +K ++LKE+++ ID+HD++ +L+ A KFL+ GDKVK +
Sbjct: 58 GKFRFEQQKKEKEARKNQKI--INLKEVRLSPTIDEHDFNTKLRNAIKFLEKGDKVKASI 115
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I ++ RF E+A+ E K D R++F++L P
Sbjct: 116 RFKGRAITHKEIGQRVLDRFSEACAEVATVETKPKMDGRSMFLMLAP 162
>gi|241890072|ref|ZP_04777370.1| translation initiation factor IF-3 [Gemella haemolysans ATCC 10379]
gi|329767186|ref|ZP_08258713.1| translation initiation factor IF-3 [Gemella haemolysans M341]
gi|241863694|gb|EER68078.1| translation initiation factor IF-3 [Gemella haemolysans ATCC 10379]
gi|328836853|gb|EGF86500.1| translation initiation factor IF-3 [Gemella haemolysans M341]
Length = 175
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+++EQQKK+K +KK + KE+++ I++HD+ +LK ARKFL DKVKV +
Sbjct: 67 GKFKFEQQKKEKEARKKQKI--VTTKEIRLSPTIEKHDFETKLKNARKFLAKEDKVKVSI 124
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVPNK 116
KGR + I +++ F N+ ++A+ E K R++F++L P K
Sbjct: 125 RFKGRAITHKEIGQKVLENFSNEASDIATVEQKPKMEGRSMFLVLAPKK 173
>gi|433443898|ref|ZP_20409021.1| translation initiation factor IF-3 [Anoxybacillus flavithermus
TNO-09.006]
gi|432001872|gb|ELK22739.1| translation initiation factor IF-3 [Anoxybacillus flavithermus
TNO-09.006]
Length = 180
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+EQQKK+K +KK +++KE+++ I++HD++ +L+ ARKFL+ GDKVK +
Sbjct: 72 GKFRFEQQKKEKEARKKQKV--INVKEVRLSPTIEEHDFNTKLRNARKFLEKGDKVKATI 129
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I ++ RF ++ + E D R++F++L P
Sbjct: 130 RFKGRAITHKEIGQRVLDRFAEACADIGTVETAPKMDGRSMFLVLAP 176
>gi|16079939|ref|NP_390765.1| translation initiation factor IF-3 [Bacillus subtilis subsp.
subtilis str. 168]
gi|238054379|sp|P55872.3|IF3_BACSU RecName: Full=Translation initiation factor IF-3
gi|1770007|emb|CAA99616.1| translation initiation factor IF3 [Bacillus subtilis]
gi|2635352|emb|CAB14847.1| initiation factor IF-3 [Bacillus subtilis subsp. subtilis str. 168]
Length = 173
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+EQQKK+K +K ++LKE+++ ID+HD++ +L+ A KFL+ GDKVK +
Sbjct: 64 GKFRFEQQKKEKEARKNQKI--INLKEVRLSPTIDEHDFNTKLRNAIKFLEKGDKVKASI 121
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I ++ RF E+A+ E K D R++F++L P
Sbjct: 122 RFKGRAITHKEIGQRVLDRFSEACAEVATVETKPKMDGRSMFLMLAP 168
>gi|406671292|ref|ZP_11078531.1| translation initiation factor IF-3 [Facklamia hominis CCUG 36813]
gi|405580542|gb|EKB54601.1| translation initiation factor IF-3 [Facklamia hominis CCUG 36813]
Length = 168
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 67/108 (62%), Gaps = 3/108 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYRYEQQKK+K Q+K + +++KE++ +ID HDY +L+ + KFL+ GDKVK +
Sbjct: 58 GKYRYEQQKKEKEQRKNTKT--VNVKEVRFSPSIDDHDYQTKLRQSIKFLEKGDKVKASI 115
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVPN 115
+GR +++ +++ F D ++A E+K R+++ I+ PN
Sbjct: 116 RFRGRSITHKDLGRDVLEDFIEDTKDIAVVESKPKMEGRSMYTIVAPN 163
>gi|283458461|ref|YP_003363087.1| translation initiation factor 3 [Rothia mucilaginosa DY-18]
gi|283134502|dbj|BAI65267.1| translation initiation factor 3 [Rothia mucilaginosa DY-18]
Length = 258
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 76/130 (58%), Gaps = 5/130 (3%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YE K + +KK A N + LKE++ ID HDY ++ AR+FL GDKVK ++
Sbjct: 105 GKYKYEAAIKARESRKKQA-NAV-LKEIRFRLKIDTHDYETKVGHARRFLSGGDKVKAMI 162
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP--NKALLQKAQEP 125
+GRE + + + L+ R ++ E+++ E++ +D RN+ ++L P KA ++ Q
Sbjct: 163 QFRGREQQRPEMGVRLLERLAAELAEVSTVESRPRQDGRNMVMVLAPLRGKAEARREQGA 222
Query: 126 PKKKDKQVVD 135
+K ++ +D
Sbjct: 223 GGRKGRERID 232
>gi|194017400|ref|ZP_03056012.1| translation initiation factor IF-3 [Bacillus pumilus ATCC 7061]
gi|194011268|gb|EDW20838.1| translation initiation factor IF-3 [Bacillus pumilus ATCC 7061]
Length = 154
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+EQQKK K +K + LKE+++ ID+HD++ +L+ A KFL+ GDKVK +
Sbjct: 46 GKFRFEQQKKDKEARKNQKI--ISLKEVRLSPTIDEHDFNTKLRNAIKFLEKGDKVKASI 103
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I ++ RF E+A+ E K D R++F++L P
Sbjct: 104 RFKGRAITHKEIGQRVLDRFSEACAEVATVETKPKMDGRSMFLMLAP 150
>gi|15964035|ref|NP_384388.1| translation initiation factor IF-3 [Sinorhizobium meliloti 1021]
gi|334318311|ref|YP_004550930.1| translation initiation factor IF-3 [Sinorhizobium meliloti AK83]
gi|384538161|ref|YP_005722246.1| translation initiation factor IF-3 [Sinorhizobium meliloti SM11]
gi|407722623|ref|YP_006842285.1| translation initiation factor IF-3 [Sinorhizobium meliloti Rm41]
gi|418401561|ref|ZP_12975088.1| translation initiation factor IF-3 [Sinorhizobium meliloti
CCNWSX0020]
gi|15073211|emb|CAC41719.1| Probable translation initiation factor IF-3 protein [Sinorhizobium
meliloti 1021]
gi|334097305|gb|AEG55316.1| translation initiation factor IF-3 [Sinorhizobium meliloti AK83]
gi|336035053|gb|AEH80985.1| translation initiation factor IF-3 [Sinorhizobium meliloti SM11]
gi|359504520|gb|EHK77055.1| translation initiation factor IF-3 [Sinorhizobium meliloti
CCNWSX0020]
gi|407320855|emb|CCM69459.1| translation initiation factor IF-3 [Sinorhizobium meliloti Rm41]
Length = 143
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y QKK +KK +++KE+KM NID HDY V++KA +F ++GDKVKV
Sbjct: 37 LGKLKYANQKKAAEARKKQKI--VEIKEIKMRPNIDTHDYEVKMKAMNRFFEEGDKVKVT 94
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE + + ++L+ + ++D E+A E R + ++L P
Sbjct: 95 LKFRGREMAHQELGMKLLMQVKDDTQEIAKVEAEPKLEGRQMMMVLAP 142
>gi|395783660|ref|ZP_10463509.1| translation initiation factor IF-3 [Bartonella melophagi K-2C]
gi|395425782|gb|EJF91942.1| translation initiation factor IF-3 [Bartonella melophagi K-2C]
Length = 132
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 65/108 (60%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y+ QKK +KK +++KE+KM N+D HDY V+LKA +F+ G+KVK+
Sbjct: 26 LGKLKYQNQKKAAETRKKQKT--IEVKEIKMRPNVDVHDYEVKLKAVHRFIDHGNKVKIT 83
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE +++ ++L++R + D E+A E R + +++ P
Sbjct: 84 LRFRGREMAHQDLGMKLLQRVKEDTREIAKIESEPKLEGRQMMMVIAP 131
>gi|51892229|ref|YP_074920.1| translation initiation factor IF-3 [Symbiobacterium thermophilum
IAM 14863]
gi|51855918|dbj|BAD40076.1| translation initiation factor IF-3 [Symbiobacterium thermophilum
IAM 14863]
Length = 199
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 65/117 (55%), Gaps = 3/117 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
+Y+YEQ K+++ +KK + +KE+KM NID HD++VR + A FL+DGDKVK +
Sbjct: 80 GRYKYEQAKREREARKKQKV--ITIKEVKMRPNIDDHDFAVRQRQAESFLRDGDKVKATI 137
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILVPNKALLQKAQE 124
+GRE + E++ R V ++ E RN+ +IL P L KA +
Sbjct: 138 MFRGREVVHAQLGKEVLDRLLETVKDICVVERPPRLEGRNMIMILAPKANLEPKAAQ 194
>gi|451941352|ref|YP_007461989.1| translation initiation factor IF-3 [Bartonella vinsonii subsp.
berkhoffii str. Winnie]
gi|451900739|gb|AGF75201.1| translation initiation factor IF-3 [Bartonella vinsonii subsp.
berkhoffii str. Winnie]
Length = 172
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 64/106 (60%), Gaps = 3/106 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y+ QKK +KK +++KE+KM N+D HDY V+LKA +F+ +GDKVK+
Sbjct: 66 LGKLKYQTQKKAAETRKKQKV--IEIKEIKMRPNVDVHDYGVKLKAIHRFIGNGDKVKIT 123
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIIL 112
+ +GRE +++ ++L+ R + D E+A E R + +++
Sbjct: 124 LRFRGREMAHQDLGLKLLNRVKEDTSEIAKIESEPKLEGRQMMMVI 169
>gi|312195567|ref|YP_004015628.1| translation initiation factor IF-3 [Frankia sp. EuI1c]
gi|311226903|gb|ADP79758.1| translation initiation factor IF-3 [Frankia sp. EuI1c]
Length = 182
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 65/118 (55%), Gaps = 3/118 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE +K++ +K +KE+K+ ID HDY + +FLK GDKVK+ +
Sbjct: 63 GKFKYESDQKRREARKNQVQT--VIKEMKLRPKIDPHDYETKKGHVVRFLKAGDKVKITI 120
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNKALLQKAQEP 125
+GRE + I L++R DV EL E + +D RN+ +++ P+K Q+ EP
Sbjct: 121 MFRGREQSRPELGIRLLQRLSTDVAELGYVEAQPKQDGRNMTMVMAPHKGASQRRPEP 178
>gi|315649038|ref|ZP_07902132.1| translation initiation factor IF-3 [Paenibacillus vortex V453]
gi|315275719|gb|EFU39073.1| translation initiation factor IF-3 [Paenibacillus vortex V453]
Length = 164
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+RYEQQKK+K +K +D+KE+ NI++HDY +L+ KFLK+GDKVK V
Sbjct: 58 GKFRYEQQKKEKEARKNQKI--VDIKEVWFRANIEEHDYQTKLRNVVKFLKEGDKVKCSV 115
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE NI +++ R + +V +L E R++ +IL P
Sbjct: 116 RFRGREITHANIGQKILERVKVEVADLCVIERQPKLEGRSMIMILAP 162
>gi|163757701|ref|ZP_02164790.1| translation initiation factor IF-3 protein [Hoeflea phototrophica
DFL-43]
gi|162285203|gb|EDQ35485.1| translation initiation factor IF-3 protein [Hoeflea phototrophica
DFL-43]
Length = 140
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y+ QKK +KK +++KE+KM NID HDY V+++A +F +GDKVKV
Sbjct: 34 LGKLKYQSQKKASEARKKQ--KTVEVKEIKMRPNIDTHDYDVKMRAMNRFFDEGDKVKVT 91
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE + ++L+++ ++D E+A E R + ++L P
Sbjct: 92 LRFRGREMAHMELGMKLLQKVKDDTVEIAKVEAEPKLEGRQMMMVLAP 139
>gi|349700351|ref|ZP_08901980.1| translation initiation factor IF-3 [Gluconacetobacter europaeus LMG
18494]
Length = 173
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 71/107 (66%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YEQQKK+ +KK +++KE+K+ NID++DY V+++A + F+ +GDKVKV +
Sbjct: 68 GKFKYEQQKKRNEARKKQKV--IEIKEVKVRPNIDENDYQVKMRAMKTFIGEGDKVKVTL 125
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVP 114
+GRE +++ ++++ R + ++ E+A E+ +R + ++L P
Sbjct: 126 RFRGREMAHQDLGVKVLERIRAEMDEVAKVEHMPKLENRQMIMVLAP 172
>gi|99081604|ref|YP_613758.1| translation initiation factor 3 [Ruegeria sp. TM1040]
gi|99037884|gb|ABF64496.1| bacterial translation initiation factor 3 (bIF-3) [Ruegeria sp.
TM1040]
Length = 137
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YEQQK++ +KK +++KE+K N D HDY V+++ KFL++GDKVKV +
Sbjct: 29 GKFKYEQQKRESEARKKQKI--IEVKEVKFRPNTDTHDYDVKMRNVIKFLENGDKVKVTL 86
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVP 114
+GRE +N+ EL++R D+ EL EN R + +++ P
Sbjct: 87 RFRGREMAHQNLGRELLQRVAEDIKELGKVENMPKMEGRQMIMMIGP 133
>gi|150398669|ref|YP_001329136.1| translation initiation factor IF-3 [Sinorhizobium medicae WSM419]
gi|150030184|gb|ABR62301.1| initiation factor 3 [Sinorhizobium medicae WSM419]
Length = 132
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y QKK +KK +++KE+KM NID HDY V++KA +F ++GDKVKV
Sbjct: 26 LGKLKYANQKKAAEARKKQKI--VEIKEIKMRPNIDTHDYEVKMKAMNRFFEEGDKVKVT 83
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE + + ++L+ + ++D E+A E R + ++L P
Sbjct: 84 LKFRGREMAHQELGMKLLMQVKDDTQEIAKVEAEPKLEGRQMMMVLAP 131
>gi|359408034|ref|ZP_09200506.1| translation initiation factor IF-3 [SAR116 cluster alpha
proteobacterium HIMB100]
gi|356676791|gb|EHI49140.1| translation initiation factor IF-3 [SAR116 cluster alpha
proteobacterium HIMB100]
Length = 143
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+Y+ QK+ +KK +++KE+K+ NID HDY V++++ RKFL+ GDKVK+ +
Sbjct: 38 GKYKYQAQKRASEARKKQKV--IEVKEIKLRPNIDSHDYDVKMRSVRKFLEAGDKVKITL 95
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVP 114
+GRE + +L++R + D+ E A E+ R + ++L P
Sbjct: 96 RFRGREMAHVELGSQLLKRVREDIEEEAKIESLPKMEGRQMIMVLAP 142
>gi|398385685|ref|ZP_10543703.1| translation initiation factor IF-3 [Sphingobium sp. AP49]
gi|397719954|gb|EJK80516.1| translation initiation factor IF-3 [Sphingobium sp. AP49]
Length = 177
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 61/111 (54%), Gaps = 3/111 (2%)
Query: 5 YFFLSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKV 64
+ + K++YE QKK +K +LKE+KM NID HDY ++K F+ DGDKV
Sbjct: 68 FLDIGKFKYEAQKKANLARKTQKTQ--ELKEIKMRPNIDDHDYDTKMKKVHDFIGDGDKV 125
Query: 65 KVIVNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
K+ + +GRE + + + L++R +V E+A E R + ++L P
Sbjct: 126 KITLRFRGRELSHQQLGMALLQRVAENVAEIAKVEAYPRMEGRQMLMVLAP 176
>gi|300744014|ref|ZP_07073034.1| translation initiation factor IF-3 [Rothia dentocariosa M567]
gi|300380375|gb|EFJ76938.1| translation initiation factor IF-3 [Rothia dentocariosa M567]
Length = 246
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 75/134 (55%), Gaps = 5/134 (3%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YE K + +KK LKE++ ID HDY ++ AR+FL GDKVK ++
Sbjct: 93 GKYKYEAAVKARESRKKQV--NAVLKEIRFRLKIDTHDYETKVGHARRFLTGGDKVKAMI 150
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP--NKALLQKAQEP 125
+GRE + + + L+ R ++ E+++ E++ +D RN+ ++L P KA +++ Q
Sbjct: 151 QFRGREQQRPEMGVRLLERLAEELAEVSTIESRPRQDGRNMVMVLAPLRGKAEVRRGQNS 210
Query: 126 PKKKDKQVVDEVST 139
+K ++ +D +
Sbjct: 211 GNRKGRERLDTTTA 224
>gi|20532093|sp|Q92ST3.2|IF3_RHIME RecName: Full=Translation initiation factor IF-3
Length = 177
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y QKK +KK +++KE+KM NID HDY V++KA +F ++GDKVKV
Sbjct: 71 LGKLKYANQKKAAEARKKQKI--VEIKEIKMRPNIDTHDYEVKMKAMNRFFEEGDKVKVT 128
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE + + ++L+ + ++D E+A E R + ++L P
Sbjct: 129 LKFRGREMAHQELGMKLLMQVKDDTQEIAKVEAEPKLEGRQMMMVLAP 176
>gi|290968292|ref|ZP_06559834.1| translation initiation factor IF-3 [Megasphaera genomosp. type_1
str. 28L]
gi|335049364|ref|ZP_08542363.1| translation initiation factor IF-3 [Megasphaera sp. UPII 199-6]
gi|290781651|gb|EFD94237.1| translation initiation factor IF-3 [Megasphaera genomosp. type_1
str. 28L]
gi|333763501|gb|EGL40950.1| translation initiation factor IF-3 [Megasphaera sp. UPII 199-6]
Length = 154
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 69/110 (62%), Gaps = 3/110 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYRYEQQK++K + K + LKE+K+ NI+ HD+ V++KAA++FL DG KVKV +
Sbjct: 46 GKYRYEQQKREK--EAKKKQKVLVLKEVKLRPNIEDHDFYVKMKAAQRFLGDGSKVKVTI 103
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKA 117
+GRE + +L+ RF +++ E A E+ RN+ +++ NKA
Sbjct: 104 MFRGREMSHPELGRDLLIRFADELKESAHVEKEPKIEGRNMTMVMATNKA 153
>gi|386721195|ref|YP_006187520.1| protein InfC [Paenibacillus mucilaginosus K02]
gi|384088319|gb|AFH59755.1| InfC [Paenibacillus mucilaginosus K02]
Length = 166
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+RYE QKK+K +K +DLKE+++ ID+HD+ +L+ KFL DGDKVK+ V
Sbjct: 58 GKFRYETQKKEKEARKNQKI--VDLKEIRLSATIDEHDFQTKLRNVEKFLNDGDKVKLSV 115
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVP 114
+GRE +I +++ R V EL E + R++ +IL P
Sbjct: 116 RFRGREIAHASIGQKVLERMAATVEELCVVERRPKLEGRSMIMILAP 162
>gi|384531438|ref|YP_005715526.1| translation initiation factor IF-3 [Sinorhizobium meliloti BL225C]
gi|333813614|gb|AEG06283.1| Translation initiation factor IF-3 [Sinorhizobium meliloti BL225C]
Length = 178
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y QKK +KK +++KE+KM NID HDY V++KA +F ++GDKVKV
Sbjct: 72 LGKLKYANQKKAAEARKKQKI--VEIKEIKMRPNIDTHDYEVKMKAMNRFFEEGDKVKVT 129
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE + + ++L+ + ++D E+A E R + ++L P
Sbjct: 130 LKFRGREMAHQELGMKLLMQVKDDTQEIAKVEAEPKLEGRQMMMVLAP 177
>gi|124213|sp|P03000.2|IF3_BACST RecName: Full=Translation initiation factor IF-3
gi|580890|emb|CAA34312.1| unnamed protein product [Geobacillus stearothermophilus]
Length = 172
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+EQQKK+K +KK +++KE+++ I++HD++ +L+ ARKFL+ GDKVK +
Sbjct: 63 GKFRFEQQKKEKEARKKQKV--INVKEVRLSPTIEEHDFNTKLRNARKFLEKGDKVKATI 120
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I ++ R ++A E D RN+F++L P
Sbjct: 121 RFKGRAITHKEIGQRVLDRLSEACADIAVVETAPKMDGRNMFLVLAP 167
>gi|223765|prf||0910186A initiation factor IF3
Length = 171
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+EQQKK+K +KK +++KE+++ I++HD++ +L+ ARKFL+ GDKVK +
Sbjct: 62 GKFRFEQQKKEKEARKKQKV--INVKEVRLSPTIEEHDFNTKLRNARKFLEKGDKVKATI 119
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I ++ R ++A E D RN+F++L P
Sbjct: 120 RFKGRAITHKEIGQRVLDRLSEACADIAVVETAPKMDGRNMFLVLAP 166
>gi|83952033|ref|ZP_00960765.1| translation initiation factor [Roseovarius nubinhibens ISM]
gi|83837039|gb|EAP76336.1| translation initiation factor [Roseovarius nubinhibens ISM]
Length = 136
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 65/108 (60%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
KY+YEQQK++ +KK +++KE+K N D HDY V++++ KFL++GDKVK+
Sbjct: 28 FGKYKYEQQKRESEARKKQKV--IEVKEIKFRPNTDTHDYEVKMRSVMKFLENGDKVKIT 85
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVP 114
+ +GRE +++ +L++R D+ + EN R + +I+ P
Sbjct: 86 MRFRGREMAHQDLGRQLLQRVSGDIEGVGKVENMPKMEGRQMIMIIAP 133
>gi|428224577|ref|YP_007108674.1| translation initiation factor 3 (bIF-3) [Geitlerinema sp. PCC 7407]
gi|427984478|gb|AFY65622.1| bacterial translation initiation factor 3 (bIF-3) [Geitlerinema sp.
PCC 7407]
Length = 177
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 69/109 (63%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY++EQ+KK + + K + +KE+KM Y I++HDY VR+ A KFLK GDKVK V
Sbjct: 71 GKYKFEQEKKAR--EAKKKQHSAGVKEVKMRYKIEEHDYRVRINQAIKFLKSGDKVKATV 128
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + ++A +L++R D+ E+A + R+ RN+ ++L P K
Sbjct: 129 MFRGREIQHTDLAEDLLKRMATDLQEVAEIQQSPKREGRNMMMLLSPKK 177
>gi|162147244|ref|YP_001601705.1| translation initiation factor IF-3 [Gluconacetobacter
diazotrophicus PAl 5]
gi|209544294|ref|YP_002276523.1| translation initiation factor IF-3 [Gluconacetobacter
diazotrophicus PAl 5]
gi|161785821|emb|CAP55392.1| Translation initiation factor IF-3 [Gluconacetobacter
diazotrophicus PAl 5]
gi|209531971|gb|ACI51908.1| translation initiation factor IF-3 [Gluconacetobacter
diazotrophicus PAl 5]
Length = 173
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 70/107 (65%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YEQQKK+ +KK +++KE+K+ NID++DY V+++A + F+ +GDKVKV +
Sbjct: 68 GKFKYEQQKKRNEARKKQKV--IEIKEVKVRPNIDENDYQVKMRAMKSFIGEGDKVKVTL 125
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE +++ I+++ R + ++ E A E+ +R + ++L P
Sbjct: 126 RFRGREMAHQDLGIKVLERIRTEMDEQAKVEQMPKLENRQMIMVLSP 172
>gi|163795475|ref|ZP_02189442.1| Initiation factor 3 [alpha proteobacterium BAL199]
gi|159179461|gb|EDP63992.1| Initiation factor 3 [alpha proteobacterium BAL199]
Length = 144
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Query: 31 MDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQN 90
+++KE+KM NID HDY ++++ +FL+DGDKVK+ + +GRE + I + +++R Q+
Sbjct: 59 IEVKEIKMRPNIDDHDYQTKMRSVNRFLEDGDKVKLTMRFRGREMAHQEIGLNVLKRVQD 118
Query: 91 DVGELAS-EENKNFRDRNIFIILVP 114
D+GELA E + R + +++ P
Sbjct: 119 DLGELAKIEAHPRLEGRQMVMVVAP 143
>gi|418054823|ref|ZP_12692879.1| Translation initiation factor IF-3 [Hyphomicrobium denitrificans
1NES1]
gi|353212448|gb|EHB77848.1| Translation initiation factor IF-3 [Hyphomicrobium denitrificans
1NES1]
Length = 176
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
KY++++QKK +K ++LKE+KM ID HDY V+L+A ++F +DGDKVK+
Sbjct: 70 FGKYKFQEQKKAAEARKNQKI--VELKEIKMRPGIDDHDYDVKLRAIKRFFEDGDKVKIT 127
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE + + +++R + D +A E F R + ++L P
Sbjct: 128 LRFRGREMAHSQLGMAVLQRVKGDTDAIAKVESEPRFEGRQMVMVLAP 175
>gi|417788020|ref|ZP_12435703.1| translation initiation factor 3 [Lactobacillus salivarius NIAS840]
gi|417810598|ref|ZP_12457277.1| translation initiation factor IF-3 [Lactobacillus salivarius GJ-24]
gi|418961110|ref|ZP_13512997.1| translation initiation factor IF-3 [Lactobacillus salivarius
SMXD51]
gi|334308197|gb|EGL99183.1| translation initiation factor 3 [Lactobacillus salivarius NIAS840]
gi|335349394|gb|EGM50894.1| translation initiation factor IF-3 [Lactobacillus salivarius GJ-24]
gi|380344777|gb|EIA33123.1| translation initiation factor IF-3 [Lactobacillus salivarius
SMXD51]
Length = 166
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 69/107 (64%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYR+E QKK++ +KK +++KE+++ ID +D++ ++K ARKFL GDKVKV +
Sbjct: 58 GKYRFELQKKQREARKKQKV--VNIKEVRLSPTIDTNDFNTKMKNARKFLSKGDKVKVSI 115
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR ++I +++ RF ++A+ E+K D R++F++L P
Sbjct: 116 RFKGRAITHKDIGRDVLNRFAEATEDVATVESKAKMDGRSMFLMLAP 162
>gi|154687021|ref|YP_001422182.1| translation initiation factor IF-3 [Bacillus amyloliquefaciens
FZB42]
gi|311069382|ref|YP_003974305.1| translation initiation factor IF-3 [Bacillus atrophaeus 1942]
gi|375363300|ref|YP_005131339.1| translation initiation factor IF-3 [Bacillus amyloliquefaciens
subsp. plantarum CAU B946]
gi|384266438|ref|YP_005422145.1| translation initiation factor IF-3 [Bacillus amyloliquefaciens
subsp. plantarum YAU B9601-Y2]
gi|385265778|ref|ZP_10043865.1| translation initiation factor IF-3 [Bacillus sp. 5B6]
gi|387899477|ref|YP_006329773.1| translation initiation factor IF-3 [Bacillus amyloliquefaciens Y2]
gi|394991822|ref|ZP_10384620.1| translation initiation factor IF-3 [Bacillus sp. 916]
gi|398311753|ref|ZP_10515227.1| translation initiation factor IF-3 [Bacillus mojavensis RO-H-1]
gi|419819960|ref|ZP_14343578.1| translation initiation factor IF-3 [Bacillus atrophaeus C89]
gi|421730707|ref|ZP_16169833.1| translation initiation factor IF-3 [Bacillus amyloliquefaciens
subsp. plantarum M27]
gi|429506176|ref|YP_007187360.1| translation initiation factor IF-3 [Bacillus amyloliquefaciens
subsp. plantarum AS43.3]
gi|451345963|ref|YP_007444594.1| translation initiation factor IF-3 [Bacillus amyloliquefaciens
IT-45]
gi|452856538|ref|YP_007498221.1| Translation initiation factor IF-3 [Bacillus amyloliquefaciens
subsp. plantarum UCMB5036]
gi|154352872|gb|ABS74951.1| InfC [Bacillus amyloliquefaciens FZB42]
gi|310869899|gb|ADP33374.1| translation initiation factor IF-3 [Bacillus atrophaeus 1942]
gi|371569294|emb|CCF06144.1| Translation initiation factor IF-3 [Bacillus amyloliquefaciens
subsp. plantarum CAU B946]
gi|380499791|emb|CCG50829.1| Translation initiation factor IF-3 [Bacillus amyloliquefaciens
subsp. plantarum YAU B9601-Y2]
gi|385150274|gb|EIF14211.1| translation initiation factor IF-3 [Bacillus sp. 5B6]
gi|387173587|gb|AFJ63048.1| translation initiation factor IF-3 [Bacillus amyloliquefaciens Y2]
gi|388476079|gb|EIM12784.1| translation initiation factor IF-3 [Bacillus atrophaeus C89]
gi|393807367|gb|EJD68688.1| translation initiation factor IF-3 [Bacillus sp. 916]
gi|407074861|gb|EKE47848.1| translation initiation factor IF-3 [Bacillus amyloliquefaciens
subsp. plantarum M27]
gi|429487766|gb|AFZ91690.1| translation initiation factor IF-3 [Bacillus amyloliquefaciens
subsp. plantarum AS43.3]
gi|449849721|gb|AGF26713.1| translation initiation factor IF-3 [Bacillus amyloliquefaciens
IT-45]
gi|452080798|emb|CCP22563.1| Translation initiation factor IF-3 [Bacillus amyloliquefaciens
subsp. plantarum UCMB5036]
Length = 167
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+EQQKK K +K ++LKE+++ ID+HD++ +L+ A KFL+ GDKVK +
Sbjct: 58 GKFRFEQQKKDKEARKNQKI--INLKEVRLSPTIDEHDFNTKLRNAIKFLEKGDKVKASI 115
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I ++ RF E+A+ E K D R++F++L P
Sbjct: 116 RFKGRAITHKEIGQRVLDRFSEACAEVATVETKPKMDGRSMFLMLAP 162
>gi|329891068|ref|ZP_08269411.1| translation initiation factor IF-3 [Brevundimonas diminuta ATCC
11568]
gi|429769917|ref|ZP_19302003.1| translation initiation factor IF-3 [Brevundimonas diminuta 470-4]
gi|328846369|gb|EGF95933.1| translation initiation factor IF-3 [Brevundimonas diminuta ATCC
11568]
gi|429185969|gb|EKY26935.1| translation initiation factor IF-3 [Brevundimonas diminuta 470-4]
Length = 173
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+++QKKK +K+ ++LKE+K+ NID HDY V+ KA +F DGDKVKV +
Sbjct: 68 GKHRFQEQKKKAEARKRQKV--VELKEIKLRPNIDTHDYDVKAKAMHRFFDDGDKVKVTI 125
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEE-NKNFRDRNIFIILVP 114
+GRE + ++L+ + Q D E A E R + +IL P
Sbjct: 126 RFRGREMAHPELGMKLMNKVQADFEEEAKVEFAPKMEGRQMIMILAP 172
>gi|255326345|ref|ZP_05367429.1| translation initiation factor IF-3 [Rothia mucilaginosa ATCC 25296]
gi|255296562|gb|EET75895.1| translation initiation factor IF-3 [Rothia mucilaginosa ATCC 25296]
Length = 233
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 76/130 (58%), Gaps = 5/130 (3%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YE K + +KK A N + LKE++ ID HDY ++ AR+FL GDKVK ++
Sbjct: 80 GKYKYEAAIKARESRKKQA-NAV-LKEIRFRLKIDTHDYETKVGHARRFLSGGDKVKAMI 137
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP--NKALLQKAQEP 125
+GRE + + + L+ R ++ E+++ E++ +D RN+ ++L P KA ++ Q
Sbjct: 138 QFRGREQQRPEMGVRLLERLAAELAEVSTVESRPRQDGRNMVMVLAPLRGKAEARREQGA 197
Query: 126 PKKKDKQVVD 135
+K ++ +D
Sbjct: 198 GGRKGRERID 207
>gi|547710|sp|P36177.1|IF3C_EUGGR RecName: Full=Translation initiation factor IF-3, chloroplastic;
Short=IF-3chl; Flags: Precursor
gi|475786|gb|AAA20996.1| chloroplast initiation factor 3 [Euglena gracilis]
Length = 538
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 39/107 (36%), Positives = 60/107 (56%), Gaps = 2/107 (1%)
Query: 36 LKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQNDVGEL 95
LK+ + I QHDY VR+K ARKFL+ G ++KV + KGREN+F I +++RFQND+ ++
Sbjct: 392 LKVSHKIGQHDYDVRVKQARKFLEGGHRIKVSMEFKGRENQFVEIGRAVMKRFQNDLADM 451
Query: 96 ASEEN--KNFRDRNIFIILVPNKALLQKAQEPPKKKDKQVVDEVSTG 140
+ K R I + +AL A+ ++ K +E G
Sbjct: 452 GKADAVPKKLGTRLILNLAPAGEALKVIAERRAERDRKAAAEEEGEG 498
>gi|257871007|ref|ZP_05650660.1| translation initiation factor IF-3 [Enterococcus gallinarum EG2]
gi|357051259|ref|ZP_09112453.1| translation initiation factor IF-3 [Enterococcus saccharolyticus
30_1]
gi|257805171|gb|EEV33993.1| translation initiation factor IF-3 [Enterococcus gallinarum EG2]
gi|355380081|gb|EHG27226.1| translation initiation factor IF-3 [Enterococcus saccharolyticus
30_1]
Length = 173
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 67/107 (62%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYR+EQQKK + +KK +++KE+++ ID +D++ +L+ ARKFL+ GDKVK +
Sbjct: 65 GKYRFEQQKKDREARKKQKV--INIKEVRLSPTIDVNDFNTKLRNARKFLEKGDKVKASI 122
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I +++ R + +LAS E K D R++F++L P
Sbjct: 123 RFKGRAITHKEIGQKVLDRLAEETADLASVEQKPKMDGRSMFLVLSP 169
>gi|227890561|ref|ZP_04008366.1| protein translation initiation factor 3 [Lactobacillus salivarius
ATCC 11741]
gi|301300334|ref|ZP_07206539.1| translation initiation factor IF-3 [Lactobacillus salivarius
ACS-116-V-Col5a]
gi|385840202|ref|YP_005863526.1| translation initiation factor IF-3 [Lactobacillus salivarius CECT
5713]
gi|227867499|gb|EEJ74920.1| protein translation initiation factor 3 [Lactobacillus salivarius
ATCC 11741]
gi|300214323|gb|ADJ78739.1| Translation initiation factor IF-3 [Lactobacillus salivarius CECT
5713]
gi|300852070|gb|EFK79749.1| translation initiation factor IF-3 [Lactobacillus salivarius
ACS-116-V-Col5a]
Length = 189
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 69/107 (64%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYR+E QKK++ +KK +++KE+++ ID +D++ ++K ARKFL GDKVKV +
Sbjct: 81 GKYRFELQKKQREARKKQKV--VNIKEVRLSPTIDTNDFNTKMKNARKFLSKGDKVKVSI 138
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR ++I +++ RF ++A+ E+K D R++F++L P
Sbjct: 139 RFKGRAITHKDIGRDVLNRFAEATEDVATVESKAKMDGRSMFLMLAP 185
>gi|456351723|dbj|BAM86168.1| translation initiation factor IF-3 [Agromonas oligotrophica S58]
Length = 223
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+Y QKK +KK +++KE+K+ ID HDY V+++A ++F ++GDKVK+ +
Sbjct: 118 GKYKYSAQKKAAEARKKQKV--VEIKEIKLRPMIDDHDYDVKMRAMQRFFEEGDKVKITL 175
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE + I +L+ + ++DV A E++ F R + ++L P
Sbjct: 176 RYRGREMAHQEIGTKLLDKVKSDVAAFAKVEQDARFEGRQVVMVLAP 222
>gi|367475044|ref|ZP_09474520.1| Translation initiation factor IF-3 [Bradyrhizobium sp. ORS 285]
gi|365272664|emb|CCD86988.1| Translation initiation factor IF-3 [Bradyrhizobium sp. ORS 285]
Length = 200
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+Y QKK +KK +++KE+K+ ID HDY V+++A ++F ++GDKVK+ +
Sbjct: 95 GKYKYSAQKKAAEARKKQKV--VEIKEIKLRPMIDDHDYDVKMRAMQRFFEEGDKVKITL 152
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE + I +L+ + ++DV A E++ F R + ++L P
Sbjct: 153 RYRGREMAHQEIGTKLLDKVKSDVAAFAKVEQDAKFEGRQVVMVLAP 199
>gi|90961471|ref|YP_535387.1| translation initiation factor IF-3 [Lactobacillus salivarius
UCC118]
gi|90820665|gb|ABD99304.1| Bacterial Protein Translation Initiation Factor 3 (IF-3)
[Lactobacillus salivarius UCC118]
Length = 174
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 69/107 (64%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYR+E QKK++ +KK +++KE+++ ID +D++ ++K ARKFL GDKVKV +
Sbjct: 66 GKYRFELQKKQREARKKQKV--VNIKEVRLSPTIDTNDFNTKMKNARKFLSKGDKVKVSI 123
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR ++I +++ RF ++A+ E+K D R++F++L P
Sbjct: 124 RFKGRAITHKDIGRDVLNRFAEATEDVATVESKAKMDGRSMFLMLAP 170
>gi|170742360|ref|YP_001771015.1| translation initiation factor IF-3 [Methylobacterium sp. 4-46]
gi|259491510|sp|B0UP34.1|IF3_METS4 RecName: Full=Translation initiation factor IF-3
gi|168196634|gb|ACA18581.1| translation initiation factor IF-3 [Methylobacterium sp. 4-46]
Length = 173
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
+YR+ +QKK+ +K+ +++KE+K+ ID+HDY V++KA ++F ++GDKVKV +
Sbjct: 68 GRYRFNEQKKQAEARKRQKT--VEVKEIKLRPGIDKHDYDVKMKAVQRFFEEGDKVKVTL 125
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE +++ + L+ R + + E+A E R + +IL P
Sbjct: 126 RFRGREMAHQDLGLRLLERVKAETQEIAKVESEPQLEGRQMIMILAP 172
>gi|148251836|ref|YP_001236421.1| translation initiation factor IF-3 [Bradyrhizobium sp. BTAi1]
gi|146404009|gb|ABQ32515.1| bacterial translation initiation factor 3 (bIF-3) [Bradyrhizobium
sp. BTAi1]
Length = 200
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+Y QKK +KK +++KE+K+ ID HDY V+++A ++F ++GDKVK+ +
Sbjct: 95 GKYKYSAQKKAAEARKKQKV--VEIKEIKLRPMIDDHDYDVKMRAMQRFFEEGDKVKITL 152
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE + I +L+ + ++DV A E++ F R + ++L P
Sbjct: 153 RYRGREMAHQEIGTKLLDKVKSDVAAFAKVEQDAKFEGRQVVMVLAP 199
>gi|146337304|ref|YP_001202352.1| translation initiation factor IF-3 [Bradyrhizobium sp. ORS 278]
gi|365881482|ref|ZP_09420789.1| Translation initiation factor IF-3 [Bradyrhizobium sp. ORS 375]
gi|365887654|ref|ZP_09426480.1| Translation initiation factor IF-3 [Bradyrhizobium sp. STM 3809]
gi|146190110|emb|CAL74102.1| Translation initiation factor IF-3 [Bradyrhizobium sp. ORS 278]
gi|365290323|emb|CCD93320.1| Translation initiation factor IF-3 [Bradyrhizobium sp. ORS 375]
gi|365336726|emb|CCD99011.1| Translation initiation factor IF-3 [Bradyrhizobium sp. STM 3809]
Length = 200
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+Y QKK +KK +++KE+K+ ID HDY V+++A ++F ++GDKVK+ +
Sbjct: 95 GKYKYSAQKKAAEARKKQKV--VEIKEIKLRPMIDDHDYDVKMRAMQRFFEEGDKVKITL 152
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE + I +L+ + ++DV A E++ F R + ++L P
Sbjct: 153 RYRGREMAHQEIGTKLLDKVKSDVAAFAKVEQDAKFEGRQVVMVLAP 199
>gi|311113266|ref|YP_003984488.1| translation initiation factor IF3 [Rothia dentocariosa ATCC 17931]
gi|310944760|gb|ADP41054.1| translation initiation factor IF3 [Rothia dentocariosa ATCC 17931]
Length = 233
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 77/134 (57%), Gaps = 5/134 (3%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YE K + +KK N + LKE++ ID HDY ++ AR+FL GDKVK ++
Sbjct: 80 GKYKYEAAVKARESRKKQV-NAV-LKEIRFRLKIDTHDYETKVGHARRFLTGGDKVKAMI 137
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP--NKALLQKAQEP 125
+GRE + + + L+ R ++ E+++ E++ +D RN+ ++L P KA +++ Q
Sbjct: 138 QFRGREQQRPEMGVRLLERLAEELAEVSTIESRPRQDGRNMVMVLAPLRGKAEVRRGQNS 197
Query: 126 PKKKDKQVVDEVST 139
+K ++ +D +
Sbjct: 198 GNRKGRERLDTTTA 211
>gi|222147168|ref|YP_002548125.1| translation initiation factor IF-3 [Agrobacterium vitis S4]
gi|221734158|gb|ACM35121.1| translation initiation factor IF-3 [Agrobacterium vitis S4]
Length = 151
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y QKK +KK +++KE+KM NID HDY V++K+ +F +DGDKVKV
Sbjct: 45 LGKLKYANQKKAAEARKKQKI--VEVKEIKMRPNIDTHDYEVKMKSMSRFFEDGDKVKVT 102
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE + + ++L+ + + D E+A E R + ++L P
Sbjct: 103 LKFRGREMAHQELGMKLLMQVKEDTVEVAKVEAEPKLEGRQMMMVLAP 150
>gi|407796050|ref|ZP_11143006.1| translation initiation factor IF-3 [Salimicrobium sp. MJ3]
gi|407019404|gb|EKE32120.1| translation initiation factor IF-3 [Salimicrobium sp. MJ3]
Length = 138
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY +EQQKK+K +KK + LKE+++ I++HD++ +L+ ARKFL GDKVK +
Sbjct: 29 GKYHFEQQKKEKEARKKQTT--IKLKEVRLSPGIEEHDFNTKLRNARKFLSKGDKVKASI 86
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVP 114
+GR + + +++ R ++ ++A E K RN+F++L P
Sbjct: 87 RFRGRAITHKELGQKVLDRMADECKDIAQVETKPKMEGRNMFMMLAP 133
>gi|227824121|ref|YP_002828094.1| translation initiation factor IF-3 [Sinorhizobium fredii NGR234]
gi|227343123|gb|ACP27341.1| predicted translation initiation factor IF-3 [Sinorhizobium fredii
NGR234]
Length = 143
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y QKK +KK +++KE+KM NID HDY V++KA +F +DGDKVKV
Sbjct: 37 LGKLKYANQKKAAEARKKQKI--VEIKEIKMRPNIDTHDYEVKMKAMNRFFEDGDKVKVT 94
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE + + ++L+ + ++D +A E R + ++L P
Sbjct: 95 LKFRGREMAHQELGMKLLLQVKDDTQAIAKVEAEPKLEGRQMMMVLAP 142
>gi|254475440|ref|ZP_05088826.1| translation initiation factor IF-3 [Ruegeria sp. R11]
gi|214029683|gb|EEB70518.1| translation initiation factor IF-3 [Ruegeria sp. R11]
Length = 144
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YEQQK++ +KK +++KE+K N D HDY V++K KFL++GDKVKV +
Sbjct: 36 GKFKYEQQKRESEARKKQKI--IEVKEVKFRPNTDTHDYQVKMKNVFKFLENGDKVKVTL 93
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVP 114
+GRE +N+ +L+ R D+ EL EN R + +++ P
Sbjct: 94 RFRGREMAHQNLGRDLLLRVAEDIKELGKVENMPKMEGRQMIMMIAP 140
>gi|329770371|ref|ZP_08261753.1| translation initiation factor IF-3 [Gemella sanguinis M325]
gi|328836494|gb|EGF86154.1| translation initiation factor IF-3 [Gemella sanguinis M325]
Length = 175
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 65/108 (60%), Gaps = 3/108 (2%)
Query: 10 KYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVN 69
K+++EQQKK K +KK + KE+++ I++HD+ +LK ARKFL DKVKV +
Sbjct: 68 KFKFEQQKKDKEARKKQKI--VTTKEIRLSPTIEKHDFETKLKNARKFLAKEDKVKVSIR 125
Query: 70 LKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVPNK 116
KGR + I +++ F N+ ++A+ E K R++F++L P K
Sbjct: 126 FKGRAITHKEIGQKVLENFSNEASDIATVEQKPKMEGRSMFLVLAPKK 173
>gi|302389961|ref|YP_003825782.1| translation initiation factor 3 (bIF-3) [Thermosediminibacter
oceani DSM 16646]
gi|302200589|gb|ADL08159.1| bacterial translation initiation factor 3 (bIF-3)
[Thermosediminibacter oceani DSM 16646]
Length = 192
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YEQ K++K +K + +KE++M NI++HD+ VR+K A +FL DG+KVKV +
Sbjct: 81 GKYKYEQSKREKEARKNQKV--ISIKEIRMSPNIEEHDFQVRVKNALRFLDDGNKVKVTI 138
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILVP 114
+GRE + E+++R + V E E+ RN+ +IL P
Sbjct: 139 RFRGREITHTQLGEEVLKRLADSVKEKGIVEKPPVIEGRNMVMILSP 185
>gi|406990071|gb|EKE09761.1| translation initiation factor IF-3 [uncultured bacterium]
Length = 176
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 72/109 (66%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYR+E+QK++ +KK +++KE+++ ID+HD+ V++++ARKF+++GDK+KV +
Sbjct: 70 GKYRFEEQKRRAEMRKKQKV--IEIKEIQLRPGIDKHDFEVKMRSARKFIEEGDKLKVTL 127
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNK 116
+GRE + + +++++R + + ++ E + F + + +IL P K
Sbjct: 128 RFRGRELSHQELGMDVLKRVKEALQDITKIEHDPKFEGKRVIMILAPLK 176
>gi|381397057|ref|ZP_09922471.1| Translation initiation factor IF-3 [Microbacterium laevaniformans
OR221]
gi|380776016|gb|EIC09306.1| Translation initiation factor IF-3 [Microbacterium laevaniformans
OR221]
Length = 222
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE +K K + +++ AN + LKE++ I+ HDY+ +LK A FL+ GDKVK ++
Sbjct: 73 GKFKYEAAQKAK-EARRNQANTV-LKEVRFRLKIEAHDYTTKLKRAEGFLQAGDKVKAMI 130
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNK 116
+GRE + L+R+F DV E + E N RN+ +++ P+K
Sbjct: 131 LFRGREQSRPEQGVRLLRKFAEDVAEYGTVESNPTIDGRNMVMVIAPHK 179
>gi|218459867|ref|ZP_03499958.1| translation initiation factor IF-3 [Rhizobium etli Kim 5]
Length = 122
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y QKK +KK +++KE+KM NID HDY V++KA +F +GDKVKV
Sbjct: 16 LGKLKYANQKKAAEARKKQKI--VEVKEIKMRPNIDTHDYEVKMKAMGRFFDEGDKVKVT 73
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE + + ++L+++ + D E+A E R + ++L P
Sbjct: 74 LKFRGREMAHQELGMKLLQQVKADTTEIAKVEAEPKLEGRQMMMVLAP 121
>gi|378828439|ref|YP_005191171.1| translation initiation factor IF-3 [Sinorhizobium fredii HH103]
gi|365181491|emb|CCE98346.1| Translation initiation factor IF-3 [Sinorhizobium fredii HH103]
Length = 143
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y QKK +KK +++KE+KM NID HDY V++KA +F +DGDKVKV
Sbjct: 37 LGKLKYANQKKAAEARKKQKI--VEIKEIKMRPNIDTHDYEVKMKAMNRFFEDGDKVKVT 94
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE + + ++L+ + ++D +A E R + ++L P
Sbjct: 95 LKFRGREMAHQELGMKLLLQVKDDTQAIAKVEAEPKLEGRQMMMVLAP 142
>gi|23016432|ref|ZP_00056188.1| COG0290: Translation initiation factor 3 (IF-3) [Magnetospirillum
magnetotacticum MS-1]
Length = 173
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 63/91 (69%), Gaps = 2/91 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE QKKK +KK +++KE+K+ NID HDY V++++ RKFL++GDKVKV +
Sbjct: 68 GKFKYEDQKKKNAARKKQKV--IEVKEIKLRPNIDDHDYGVKMRSMRKFLEEGDKVKVTL 125
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEE 99
+GRE +++ ++++ + ++D+ +L E
Sbjct: 126 RFRGRELAHQDLGMKVLEKVRDDLEDLGKVE 156
>gi|320093955|ref|ZP_08025784.1| translation initiation factor IF3 [Actinomyces sp. oral taxon 178
str. F0338]
gi|422012431|ref|ZP_16359121.1| translation initiation factor IF-3 [Actinomyces georgiae F0490]
gi|319979113|gb|EFW10627.1| translation initiation factor IF3 [Actinomyces sp. oral taxon 178
str. F0338]
gi|394756488|gb|EJF39574.1| translation initiation factor IF-3 [Actinomyces georgiae F0490]
Length = 222
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YE +K + ++ A + LKE++ ID HD++V+ +FL GDKVKV++
Sbjct: 72 GKYKYEAAQKARDARRNQANTQ--LKEIRFRLKIDDHDFAVKKGHVERFLSAGDKVKVMI 129
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + L+RR +++G+LA+ E+ +D RN+ ++L P K
Sbjct: 130 MFRGREQSRPEAGVRLLRRLADEIGDLATVESMPRQDGRNMTMVLAPTK 178
>gi|374292955|ref|YP_005039990.1| translation initiation factor IF-3 [Azospirillum lipoferum 4B]
gi|357424894|emb|CBS87774.1| Translation initiation factor IF-3 [Azospirillum lipoferum 4B]
Length = 144
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 69/107 (64%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE QKK +KK +++KE+K+ NID +DY V++++AR+FL++GDKVKV +
Sbjct: 39 GKFKYEAQKKANEARKKQKI--IEVKEIKLRPNIDDNDYDVKMRSARRFLEEGDKVKVTM 96
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE +++ + ++ R ++ + ELA E+ R + ++L P
Sbjct: 97 RFRGREMAHQDLGMNVLVRVRDALDELAKVEQMPKLEGRQMIMVLAP 143
>gi|336234381|ref|YP_004586997.1| translation initiation factor IF-3 [Geobacillus thermoglucosidasius
C56-YS93]
gi|335361236|gb|AEH46916.1| Translation initiation factor IF-3 [Geobacillus thermoglucosidasius
C56-YS93]
Length = 181
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+EQQKK+K +KK +++KE+++ I++HD++ +L+ ARKFL+ GDKVK +
Sbjct: 73 GKFRFEQQKKEKEARKKQKV--INVKEVRLSPTIEEHDFNTKLRNARKFLEKGDKVKATI 130
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I ++ RF ++ E D R++F++L P
Sbjct: 131 RFKGRAITHKEIGQRVLERFSEACSDIGVVETAPKMDGRSMFLVLAP 177
>gi|269925882|ref|YP_003322505.1| translation initiation factor IF-3 [Thermobaculum terrenum ATCC
BAA-798]
gi|269789542|gb|ACZ41683.1| translation initiation factor IF-3 [Thermobaculum terrenum ATCC
BAA-798]
Length = 181
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 71/120 (59%), Gaps = 5/120 (4%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+RYEQ KK++ + + + ++ +KE+++ ID HD + K AR FL++GDKVKV V
Sbjct: 46 GKFRYEQTKKER--ESRKSQKQIVIKEVRLKPKIDVHDLQTKAKQARNFLEEGDKVKVTV 103
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNK--ALLQKAQEP 125
+GRE I EL++R + +G+ A+ E+ +N+ +L P K A +KA +P
Sbjct: 104 QFRGREVVHPEIGQELVQRLMDLIGDAATIEQQPKLDGKNMTALLAPRKESAKPKKANQP 163
>gi|378550271|ref|ZP_09825487.1| hypothetical protein CCH26_09293 [Citricoccus sp. CH26A]
Length = 335
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 68/112 (60%), Gaps = 5/112 (4%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE K + + +K+ N + LKE++ ID HDY ++ ARKFL GDKVK ++
Sbjct: 51 GKWKYEAAVKAR-EARKNQTNTV-LKEVRFRLKIDTHDYETKVGHARKFLTAGDKVKAMI 108
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP--NKA 117
+GRE + + I L+ +F +DV ++ S E+ +D RN+ +++ P NKA
Sbjct: 109 QFRGREQQRPELGIRLLEKFASDVADVGSVESTPRQDGRNMVMVVGPVKNKA 160
>gi|159043698|ref|YP_001532492.1| translation initiation factor IF-3 [Dinoroseobacter shibae DFL 12]
gi|157911458|gb|ABV92891.1| translation initiation factor IF-3 [Dinoroseobacter shibae DFL 12]
Length = 202
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
K++YEQQK++ +KK +D+KE+K N D HDY V+++ KFL+ GDKVKV
Sbjct: 94 FGKFKYEQQKRESEARKKQKT--IDVKEVKFRPNTDTHDYQVKMRNVFKFLEGGDKVKVT 151
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVP 114
+ +GRE +N+ EL+ R D E+ EN R + +++ P
Sbjct: 152 LRFRGREMAHQNLGRELLERVAEDTKEIGKVENMPKMEGRQMVMMIGP 199
>gi|86355918|ref|YP_467810.1| translation initiation factor IF-3 [Rhizobium etli CFN 42]
gi|86280020|gb|ABC89083.1| translation initiation factor IF-3 protein [Rhizobium etli CFN 42]
Length = 168
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y QKK +KK +++KE+KM NID HDY V++KA +F +GDKVKV
Sbjct: 62 LGKLKYANQKKAAEARKKQKI--VEVKEIKMRPNIDTHDYEVKMKAMGRFFDEGDKVKVT 119
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE + + ++L+++ + D E+A E R + ++L P
Sbjct: 120 LKFRGREMAHQELGMKLLQQVKADTTEIAKVEAEPKLEGRQMMMVLAP 167
>gi|398378266|ref|ZP_10536431.1| translation initiation factor IF-3 [Rhizobium sp. AP16]
gi|397725246|gb|EJK85700.1| translation initiation factor IF-3 [Rhizobium sp. AP16]
Length = 132
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y QKK +KK +++KE+KM NID HDY V++KA +F ++GDKVKV
Sbjct: 26 LGKLKYANQKKAAEARKKQKI--VEVKEIKMRPNIDTHDYEVKMKAIGRFFEEGDKVKVT 83
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE + + ++L+++ + D E+A E R + ++L P
Sbjct: 84 LKFRGREMAHQELGMKLLQQVKEDTVEIAKVEAEPKLEGRQMMMVLAP 131
>gi|393766398|ref|ZP_10354954.1| translation initiation factor IF-3 [Methylobacterium sp. GXF4]
gi|392728179|gb|EIZ85488.1| translation initiation factor IF-3 [Methylobacterium sp. GXF4]
Length = 173
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 67/107 (62%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
++R+ +QKK+ +K+ +++KE+K+ ID+HDY ++K+ +F ++GDKVKV +
Sbjct: 68 GRFRFNEQKKQNEARKRQKT--VEVKEIKLRPGIDKHDYDTKMKSVHRFFEEGDKVKVTL 125
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKN-FRDRNIFIILVP 114
+GRE ++I + L+ R +N+ E+A E++ R + +IL P
Sbjct: 126 RFRGREMAHQDIGLRLLERVKNETAEIAKVESEPMLEGRQMIMILAP 172
>gi|302381459|ref|YP_003817282.1| translation initiation factor IF-3 [Brevundimonas subvibrioides
ATCC 15264]
gi|302192087|gb|ADK99658.1| translation initiation factor IF-3 [Brevundimonas subvibrioides
ATCC 15264]
Length = 188
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+++QKKK +K+ ++LKE+K+ NID HDY V+ KA +F +GDKVKV +
Sbjct: 83 GKFRFQEQKKKAEARKRQKV--VELKEIKLRPNIDIHDYEVKAKAMHRFFDEGDKVKVTL 140
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEE-NKNFRDRNIFIILVP 114
+GRE + ++L+ + Q D E+A E R + +IL P
Sbjct: 141 RFRGREMAHPELGMKLLNKVQADFDEIAKVEYAPRMEGRQMIMILAP 187
>gi|190889925|ref|YP_001976467.1| translation initiation factor IF-3 [Rhizobium etli CIAT 652]
gi|421588394|ref|ZP_16033686.1| translation initiation factor IF-3 [Rhizobium sp. Pop5]
gi|190695204|gb|ACE89289.1| translation initiation factor IF-3 protein [Rhizobium etli CIAT
652]
gi|403706900|gb|EJZ22041.1| translation initiation factor IF-3 [Rhizobium sp. Pop5]
Length = 168
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y QKK +KK +++KE+KM NID HDY V++KA +F +GDKVKV
Sbjct: 62 LGKLKYANQKKAAEARKKQKI--VEVKEIKMRPNIDTHDYEVKMKAMGRFFDEGDKVKVT 119
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE + + ++L+++ + D E+A E R + ++L P
Sbjct: 120 LKFRGREMAHQELGMKLLQQVKADTTEIAKVEAEPKLEGRQMMMVLAP 167
>gi|225181660|ref|ZP_03735100.1| translation initiation factor IF-3 [Dethiobacter alkaliphilus AHT
1]
gi|225167641|gb|EEG76452.1| translation initiation factor IF-3 [Dethiobacter alkaliphilus AHT
1]
Length = 140
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY++EQ K++K +K + +KE+K+ NI++HD+ V+LK AR+FL++GDKVK V
Sbjct: 33 GKYKFEQSKREKEARKNQKT--ITMKEVKVRPNIEEHDFQVKLKNARRFLENGDKVKATV 90
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVP 114
+GRE + +L+ R DV +L + E RN+ +IL P
Sbjct: 91 MFRGREITHPELGQKLLLRIAKDVEDLGNVERVPKVEGRNMIMILTP 137
>gi|307102855|gb|EFN51121.1| hypothetical protein CHLNCDRAFT_141304 [Chlorella variabilis]
Length = 380
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 64/107 (59%), Gaps = 2/107 (1%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
SKY YE +K K ++K ++ KE+K+ D HDY V++KAA+KFL G +VK+
Sbjct: 267 FSKYNYELEKAAKEAKRKQREAVVETKEVKLRPATDVHDYQVKVKAAQKFLGKGHRVKLT 326
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVG--ELASEENKNFRDRNIFIIL 112
+ +GRE EF+ I E+ +RF D G +++ E+ + R + ++L
Sbjct: 327 LQFRGREMEFQQIGREMFQRFVEDCGGSDVSIEQPPQMQGRQMTMLL 373
>gi|423719000|ref|ZP_17693182.1| translation initiation factor IF-3 [Geobacillus thermoglucosidans
TNO-09.020]
gi|383367903|gb|EID45178.1| translation initiation factor IF-3 [Geobacillus thermoglucosidans
TNO-09.020]
Length = 173
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+EQQKK+K +KK +++KE+++ I++HD++ +L+ ARKFL+ GDKVK +
Sbjct: 65 GKFRFEQQKKEKEARKKQKV--INVKEVRLSPTIEEHDFNTKLRNARKFLEKGDKVKATI 122
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I ++ RF ++ E D R++F++L P
Sbjct: 123 RFKGRAITHKEIGQRVLERFSEACSDIGVVETAPKMDGRSMFLVLAP 169
>gi|348590450|ref|YP_004874912.1| translation initiation factor 3 [Taylorella asinigenitalis MCE3]
gi|347974354|gb|AEP36889.1| Translation initiation factor 3 [Taylorella asinigenitalis MCE3]
gi|399116308|emb|CCG19113.1| translation initiation factor IF-3 [Taylorella asinigenitalis
14/45]
Length = 157
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 70/109 (64%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++Y++QK+ Q+ KS + +KE+K D+ DY V+L++ ++F++DGDK KV +
Sbjct: 48 GKFKYQEQKRL--QEAKSKQKIVQVKEIKFRPGTDEGDYQVKLRSLKRFIEDGDKAKVTL 105
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVPNK 116
+GRE +++ ++++ R + D+G+L + E+ F R + +++ PNK
Sbjct: 106 RFRGREMTHQDLGMKVLERVREDLGDLITVESMPKFEGRQMVMVVAPNK 154
>gi|148259429|ref|YP_001233556.1| translation initiation factor IF-3 [Acidiphilium cryptum JF-5]
gi|146401110|gb|ABQ29637.1| bacterial translation initiation factor 3 (bIF-3) [Acidiphilium
cryptum JF-5]
Length = 144
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 68/107 (63%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YEQQKKK +KK +++KE+K+ NID++DY V+L+A + F+ DGDKVKV +
Sbjct: 39 GKFKYEQQKKKNEARKKQKV--IEIKEIKVRPNIDENDYQVKLRAMKSFIGDGDKVKVTL 96
Query: 69 NLKGRENEFRNIAIELIRRFQNDV-GELASEENKNFRDRNIFIILVP 114
+GRE + + ++++ R + D+ + E+ +R + ++L P
Sbjct: 97 RFRGREMAHQELGVKVLERIRLDMETDTKVEQMPKMENRQMIMVLSP 143
>gi|253577273|ref|ZP_04854592.1| translation initiation factor IF-3 [Paenibacillus sp. oral taxon
786 str. D14]
gi|251843387|gb|EES71416.1| translation initiation factor IF-3 [Paenibacillus sp. oral taxon
786 str. D14]
Length = 164
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+RYEQQKK+K +K +D+KE+ NI++HD+ +L+ KFLKDGDKVK V
Sbjct: 58 GKFRYEQQKKEKEARKNQKI--VDIKEVWFRANIEEHDFQTKLRNVIKFLKDGDKVKCSV 115
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVP 114
+GRE +I +++ R +++V E+++ E R++ +IL P
Sbjct: 116 RFRGREITHADIGKKILDRVKDEVAEISNVERVPKLEGRSMIMILAP 162
>gi|334127677|ref|ZP_08501581.1| translation initiation factor IF3 [Centipeda periodontii DSM 2778]
gi|333388914|gb|EGK60082.1| translation initiation factor IF3 [Centipeda periodontii DSM 2778]
Length = 206
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 75/129 (58%), Gaps = 14/129 (10%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYRYEQQK++K +KK + +KE+K+ NID+HD++V+LK A +F+++G+KVKV +
Sbjct: 78 GKYRYEQQKREKEAKKKQKT--ISIKEVKLRPNIDEHDFNVKLKNALRFVEEGNKVKVTI 135
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKALLQKAQEP-- 125
+GRE + ++ R + +L + E +N+ +IL P K Q+P
Sbjct: 136 MFRGRELSHPELGRAVLDRVAERMTQLVTIERGAKLEGKNMTMILSP------KVQKPTK 189
Query: 126 ---PKKKDK 131
P K+DK
Sbjct: 190 TVKPAKEDK 198
>gi|326402655|ref|YP_004282736.1| translation initiation factor IF-3 [Acidiphilium multivorum AIU301]
gi|338980957|ref|ZP_08632199.1| Translation initiation factor IF-3 [Acidiphilium sp. PM]
gi|325049516|dbj|BAJ79854.1| translation initiation factor IF-3 [Acidiphilium multivorum AIU301]
gi|338208131|gb|EGO96021.1| Translation initiation factor IF-3 [Acidiphilium sp. PM]
Length = 156
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 68/107 (63%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YEQQKKK +KK +++KE+K+ NID++DY V+L+A + F+ DGDKVKV +
Sbjct: 51 GKFKYEQQKKKNEARKKQKV--IEIKEIKVRPNIDENDYQVKLRAMKSFIGDGDKVKVTL 108
Query: 69 NLKGRENEFRNIAIELIRRFQNDV-GELASEENKNFRDRNIFIILVP 114
+GRE + + ++++ R + D+ + E+ +R + ++L P
Sbjct: 109 RFRGREMAHQELGVKVLERIRLDMETDTKVEQMPKMENRQMIMVLSP 155
>gi|434384839|ref|YP_007095450.1| translation initiation factor IF-3 [Chamaesiphon minutus PCC 6605]
gi|428015829|gb|AFY91923.1| translation initiation factor IF-3 [Chamaesiphon minutus PCC 6605]
Length = 183
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 59/89 (66%), Gaps = 5/89 (5%)
Query: 32 DLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQND 91
+LKE+KM Y I++HDY VR+ A +F+K GDKVK + +GRE + ++A ++++R +D
Sbjct: 96 ELKEVKMRYTIEEHDYQVRVSQADRFIKAGDKVKATITFRGREIQHSDLAEKVLKRMADD 155
Query: 92 VGELASEENKNF---RDRNIFIILVPNKA 117
+ E+A E + F RN+ +IL P KA
Sbjct: 156 LKEIA--EVQQFPKKEGRNMMMILSPKKA 182
>gi|313680891|ref|YP_004058630.1| bacterial translation initiation factor 3 (bif-3) [Oceanithermus
profundus DSM 14977]
gi|313153606|gb|ADR37457.1| bacterial translation initiation factor 3 (bIF-3) [Oceanithermus
profundus DSM 14977]
Length = 205
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 72/135 (53%), Gaps = 9/135 (6%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+RYEQQ+ +K +KK A R ++K +K ID+HDY +L R+FL+ G KVKV +
Sbjct: 73 GKWRYEQQQAEKEARKK--AKRQEMKSIKFRVKIDEHDYQTKLGHVRRFLEAGHKVKVTI 130
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNF---RDRNIFIILVP----NKALLQK 121
+GRE + +++ R D+ E+A E K RD N+ + +P KA ++
Sbjct: 131 MFRGREMAHPELGKKILDRVAEDLSEIAVVEMKPLMAGRDMNMVLAPIPPEKRGKARPER 190
Query: 122 AQEPPKKKDKQVVDE 136
+ P +++ E
Sbjct: 191 EEAAPPAPEQEAAQE 205
>gi|222084528|ref|YP_002543057.1| translation initiation factor IF-3 [Agrobacterium radiobacter K84]
gi|221721976|gb|ACM25132.1| translation initiation factor IF-3 [Agrobacterium radiobacter K84]
Length = 183
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y QKK +KK +++KE+KM NID HDY V++KA +F ++GDKVKV
Sbjct: 77 LGKLKYANQKKAAEARKKQKI--VEVKEIKMRPNIDTHDYEVKMKAIGRFFEEGDKVKVT 134
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE + + ++L+++ + D E+A E R + ++L P
Sbjct: 135 LKFRGREMAHQELGMKLLQQVKEDTVEIAKVEAEPKLEGRQMMMVLAP 182
>gi|389876053|ref|YP_006369618.1| translation initiation factor IF-3 [Tistrella mobilis KA081020-065]
gi|388526837|gb|AFK52034.1| translation initiation factor IF-3 [Tistrella mobilis KA081020-065]
Length = 192
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE QKK + +KK +++KELK NID +DY+V++K A KFL +GDKVK+ +
Sbjct: 70 GKFKYESQKKAQEARKKH--KTIEIKELKFRPNIDDNDYNVKMKHAVKFLTEGDKVKITM 127
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE +++ + ++ R D+ EL E+ R + ++L P
Sbjct: 128 RFRGREVTHQDLGMRVLMRVAGDLVELGKVEQRPTLEGRQMTMVLAP 174
>gi|386715036|ref|YP_006181359.1| translation initiation factor IF-3 [Halobacillus halophilus DSM
2266]
gi|384074592|emb|CCG46085.1| translation initiation factor IF-3 [Halobacillus halophilus DSM
2266]
Length = 167
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYR+EQQKK+K +KK + +KE+++ NI++HD++ +L+ ARKFL GDKVK V
Sbjct: 59 GKYRFEQQKKEKEARKKQTI--IKVKEIRLSPNIEEHDFNTKLRNARKFLSKGDKVKASV 116
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVP 114
+GR + + ++ R + ++A E K R++F++L P
Sbjct: 117 RFRGRAITHKELGQNVLERVAEECKDIAQVETKPKMEGRSMFLMLSP 163
>gi|357419566|ref|YP_004932558.1| translation initiation factor IF-3 [Thermovirga lienii DSM 17291]
gi|355397032|gb|AER66461.1| translation initiation factor IF-3 [Thermovirga lienii DSM 17291]
Length = 195
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 66/120 (55%), Gaps = 3/120 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+Y+ QKK+K +KKS A +KE+KM IDQHDY + KA R FL DG +VKV V
Sbjct: 66 GKYKYQLQKKEKDARKKSKAQ--TVKEMKMRPKIDQHDYEFKTKAIRNFLADGHRVKVAV 123
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKALLQKAQEPPK 127
+GRE F + E++ R D ++ E R + I+L P +K +EP K
Sbjct: 124 FFRGREMAFLDKGREVLERVIKDCQDVGKVEMEPRMEGRYMRIMLAPLPQSQKKKKEPSK 183
>gi|84502675|ref|ZP_01000794.1| translation initiation factor [Oceanicola batsensis HTCC2597]
gi|84389070|gb|EAQ01868.1| translation initiation factor [Oceanicola batsensis HTCC2597]
Length = 164
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YEQQK++ +KK +++KE+K N D HDY V+++ KFL+ GDKVKV +
Sbjct: 57 GKFKYEQQKRESEARKKQKT--IEVKEVKFRPNTDTHDYDVKMRNVVKFLEKGDKVKVTL 114
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVP 114
+GRE +N+ EL+ R DV E+ EN R + +++ P
Sbjct: 115 RFRGREMAHQNLGRELLERVAEDVREIGKVENMPKMEGRQMIMMIGP 161
>gi|408788226|ref|ZP_11199947.1| translation initiation factor IF-3 [Rhizobium lupini HPC(L)]
gi|408485815|gb|EKJ94148.1| translation initiation factor IF-3 [Rhizobium lupini HPC(L)]
Length = 140
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y QKK +KK +++KE+KM NID HDY V++KA +F +DGDKVKV
Sbjct: 34 LGKLKYATQKKAAEARKKQ--KIVEVKEIKMRPNIDTHDYDVKMKAMGRFFEDGDKVKVT 91
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE + + ++L+ + + D +A E R + ++L P
Sbjct: 92 LKFRGREMAHQELGMKLLLQVKEDTQAIAKVEAEPKLEGRQMMMVLAP 139
>gi|347752938|ref|YP_004860503.1| translation initiation factor IF-3 [Bacillus coagulans 36D1]
gi|347585456|gb|AEP01723.1| translation initiation factor IF-3 [Bacillus coagulans 36D1]
Length = 213
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 67/107 (62%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYR+E QKK + +KK +++KE+++ I++HD++ +L+ A KFL+ GDKVK +
Sbjct: 104 GKYRFEMQKKDREARKKQKI--INVKEVRLSPTIEEHDFNTKLRNAIKFLEKGDKVKASI 161
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR ++I ++ RF E+A+ E+K D R++F++L P
Sbjct: 162 RFKGRAITHKDIGQRVLDRFAEACAEVATVESKPKMDGRSMFLVLAP 208
>gi|381202519|ref|ZP_09909633.1| translation initiation factor IF-3 [Sphingobium yanoikuyae XLDN2-5]
Length = 176
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 61/111 (54%), Gaps = 3/111 (2%)
Query: 5 YFFLSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKV 64
+ + K++YE QKK +K +LKE+KM NID HDY ++K F+ DGDKV
Sbjct: 67 FLDIGKFKYEAQKKANIARKTQKTQ--ELKEIKMRPNIDDHDYDTKMKKVHDFIGDGDKV 124
Query: 65 KVIVNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
K+ + +GRE + + + L++R +V E+A E R + ++L P
Sbjct: 125 KITLRFRGRELSHQQLGMNLLQRVAENVAEIAKVEAYPRMEGRQMLMVLSP 175
>gi|295397489|ref|ZP_06807572.1| translation initiation factor IF3 [Aerococcus viridans ATCC 11563]
gi|294974289|gb|EFG50033.1| translation initiation factor IF3 [Aerococcus viridans ATCC 11563]
Length = 198
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 67/108 (62%), Gaps = 3/108 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYRYEQQ+K++ Q++ ++ LKE+++ I+Q+D+ +L+ ARKFL+ GDKVK +
Sbjct: 90 GKYRYEQQRKEREQRQNQ--KQVSLKEVRLSPTIEQNDFDTKLRQARKFLEKGDKVKASI 147
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPN 115
+GR + I E++ RF ++ ++A E+ R++F+ + P
Sbjct: 148 RFRGRAITHKEIGREVLERFAEELKDVAEVEQRPKMEGRSMFLQMAPT 195
>gi|440225203|ref|YP_007332294.1| translation initiation factor IF-3 [Rhizobium tropici CIAT 899]
gi|440036714|gb|AGB69748.1| translation initiation factor IF-3 [Rhizobium tropici CIAT 899]
Length = 183
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y QKK +KK +++KE+KM NID HDY V++KA +F ++GDKVKV
Sbjct: 77 LGKLKYANQKKAAEARKKQKI--VEVKEIKMRPNIDTHDYEVKMKAIGRFFEEGDKVKVT 134
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE + + ++L+++ + D E+A E R + ++L P
Sbjct: 135 LKFRGREMAHQELGMKLLQQVKEDTLEIAKVEAEPKLEGRQMMMVLAP 182
>gi|365899763|ref|ZP_09437650.1| Translation initiation factor IF-3 [Bradyrhizobium sp. STM 3843]
gi|365419495|emb|CCE10192.1| Translation initiation factor IF-3 [Bradyrhizobium sp. STM 3843]
Length = 200
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+Y QKK +KK +++KE+K+ ID HDY V+++A ++F ++GDKVK+ +
Sbjct: 95 GKYKYSAQKKAAEARKKQKV--VEIKEIKLRPMIDDHDYDVKMRAMQRFFEEGDKVKITL 152
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE + I +L+ + + DV A E++ F R + ++L P
Sbjct: 153 RYRGREMAHQEIGTKLLDKVKADVAAFAKVEQDAKFEGRQVVMVLAP 199
>gi|227497641|ref|ZP_03927859.1| possible translation initiation factor IF3 [Actinomyces
urogenitalis DSM 15434]
gi|226832912|gb|EEH65295.1| possible translation initiation factor IF3 [Actinomyces
urogenitalis DSM 15434]
Length = 194
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE K + ++ A + LKE++ IDQHDY+ ++ +FLK GDKVK +V
Sbjct: 48 GKFKYESAMKARDARRNQANTQ--LKEVQFRPKIDQHDYATKMGHVERFLKGGDKVKCVV 105
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + I L++R ++G+L + E+ +D R + ++L P +
Sbjct: 106 RFRGREQSRPELGIRLLQRVAEEIGDLGTVESHPRQDGRQMVMVLAPTR 154
>gi|403380030|ref|ZP_10922087.1| translation initiation factor IF-3 [Paenibacillus sp. JC66]
Length = 153
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYRYE QKK+K +K +DLKE++ I++HD+ +L+ KFLKDGDKVK V
Sbjct: 46 GKYRYEMQKKEKEARKNQKI--VDLKEVRFSATIEEHDFQTKLRNVTKFLKDGDKVKCSV 103
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVP 114
+GRE +I +++ R + EL E K R++ +IL P
Sbjct: 104 RFRGREITHASIGQKVLERVAKESEELCVVERKPKLEGRSMIMILSP 150
>gi|205374568|ref|ZP_03227364.1| translation initiation factor IF-3 [Bacillus coahuilensis m4-4]
Length = 189
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 67/108 (62%), Gaps = 3/108 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY++EQQKK K +K ++LKE+++ I++HD++ +L+ ARKFL+ GDKVK +
Sbjct: 81 GKYKFEQQKKDKEARKNQKI--INLKEVRLSPTIEEHDFNTKLRNARKFLEKGDKVKASI 138
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPN 115
KGR + I ++ RF ++A+ E+K D R++F++L P
Sbjct: 139 RFKGRAITHKEIGQRVLDRFAEACKDVATIESKPKMDGRSMFLVLAPT 186
>gi|110633028|ref|YP_673236.1| translation initiation factor IF-3 [Chelativorans sp. BNC1]
gi|110284012|gb|ABG62071.1| bacterial translation initiation factor 3 (bIF-3) [Chelativorans
sp. BNC1]
Length = 192
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y+ QKK +KK +++KE+KM NID HDY V++++ R+F ++GDKVK+
Sbjct: 86 LGKLKYQSQKKAAEARKKQKT--IEIKEIKMRPNIDIHDYEVKMRSVRRFFEEGDKVKLT 143
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE + ++L+ R + DV +A E R + ++L P
Sbjct: 144 LRFRGREMAHLELGMKLLNRVREDVEGIAKVEAEPKLEGRQMMMVLAP 191
>gi|399886947|ref|ZP_10772824.1| translation initiation factor IF-3 [Clostridium arbusti SL206]
Length = 173
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 65/111 (58%), Gaps = 3/111 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SKY YEQ KK K +K + LKE+++ I++HD ++ A+KFL +GDKVKV +
Sbjct: 65 SKYIYEQSKKLKLAKKNQKI--VSLKEVRLSPTIEEHDIDIKANNAKKFLSNGDKVKVSI 122
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILVPNKAL 118
+GR+N + +++ F + +GE+ E+ RN+F+IL P K +
Sbjct: 123 RFRGRQNNNTQVGKKVLAVFVSKIGEIGVVEKTPQLEGRNMFMILAPKKTV 173
>gi|402816212|ref|ZP_10865803.1| translation initiation factor IF-3 [Paenibacillus alvei DSM 29]
gi|402506116|gb|EJW16640.1| translation initiation factor IF-3 [Paenibacillus alvei DSM 29]
Length = 232
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+RYEQQKK+K +K +D+KE+ NI++HD++ +L+ KFL+DGDKVK V
Sbjct: 124 GKFRYEQQKKEKEARKNQKI--VDVKEVWFRANIEEHDFNTKLRNVLKFLRDGDKVKCSV 181
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILVP 114
+GRE +I +++ R N+ EL E R++ +IL P
Sbjct: 182 RFRGREITHADIGKKVLERVLNEATELCIVERAPKLEGRSMIMILAP 228
>gi|334134437|ref|ZP_08507947.1| translation initiation factor IF-3 [Paenibacillus sp. HGF7]
gi|333608245|gb|EGL19549.1| translation initiation factor IF-3 [Paenibacillus sp. HGF7]
Length = 176
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYRYE QKK+K +K +D+KE+++ ID+HD+ +L+ A KFL DGDKVK V
Sbjct: 68 GKYRYEMQKKEKEARKNQKI--VDIKEIRLSATIDEHDFQTKLRNAVKFLNDGDKVKASV 125
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE ++++R + E++S E R++ +IL P
Sbjct: 126 RFRGREIAHAENGRKVLQRLATETEEISSMERAPKLEGRSMIMILTP 172
>gi|427409143|ref|ZP_18899345.1| translation initiation factor IF-3 [Sphingobium yanoikuyae ATCC
51230]
gi|425711276|gb|EKU74291.1| translation initiation factor IF-3 [Sphingobium yanoikuyae ATCC
51230]
Length = 215
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 61/111 (54%), Gaps = 3/111 (2%)
Query: 5 YFFLSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKV 64
+ + K++YE QKK +K +LKE+KM NID HDY ++K F+ DGDKV
Sbjct: 106 FLDIGKFKYEAQKKANIARKTQKTQ--ELKEIKMRPNIDDHDYDTKMKKVHDFIGDGDKV 163
Query: 65 KVIVNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
K+ + +GRE + + + L++R +V E+A E R + ++L P
Sbjct: 164 KITLRFRGRELSHQQLGMNLLQRVAENVAEIAKVEAYPRMEGRQMLMVLSP 214
>gi|251795320|ref|YP_003010051.1| translation initiation factor IF-3 [Paenibacillus sp. JDR-2]
gi|247542946|gb|ACS99964.1| translation initiation factor IF-3 [Paenibacillus sp. JDR-2]
Length = 193
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+RYEQQKK+K +K +DLKE+ NID+HDY + + KFL +GDKVK V
Sbjct: 85 GKFRYEQQKKEKEARKNQKI--VDLKEVWFRANIDEHDYQTKFRNVVKFLGEGDKVKASV 142
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE I +++ R +V E+ S E R++ +IL P
Sbjct: 143 RFRGREIAHAAIGQKILDRLAQEVAEICSVERAPKLEGRSMIMILAP 189
>gi|417315433|ref|ZP_12102112.1| translation initiation factor IF-3, partial [Listeria monocytogenes
J1816]
gi|328466428|gb|EGF37576.1| translation initiation factor IF-3 [Listeria monocytogenes J1816]
Length = 146
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+EQQKK K +K M KE+++ ID+HD+ +L+ ARKFL+ GDKVK +
Sbjct: 38 GKFRFEQQKKDKEARKNQKVIVM--KEVRLSPTIDEHDFDTKLRNARKFLEKGDKVKCSI 95
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I +++ RF +L + E + D R++F++L P
Sbjct: 96 RFKGRAITHKEIGQKVLDRFAKACEDLCTIEQRPKMDGRSMFLVLAP 142
>gi|126740453|ref|ZP_01756141.1| translation initiation factor IF-3 [Roseobacter sp. SK209-2-6]
gi|126718589|gb|EBA15303.1| translation initiation factor IF-3 [Roseobacter sp. SK209-2-6]
Length = 200
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
K++YEQQK++ +KK +++KE+K N D HDY V+++ KFL++GDKVKV
Sbjct: 91 FGKFKYEQQKRESEARKKQKI--IEVKEVKFRPNTDTHDYEVKMRNVFKFLENGDKVKVT 148
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVP 114
+ +GRE +N+ EL+ R DV E+ EN R + +++ P
Sbjct: 149 LRFRGREMAHQNLGRELLERVAEDVKEIGKVENMPKMEGRQMIMMIGP 196
>gi|342215205|ref|ZP_08707862.1| translation initiation factor IF-3 [Veillonella sp. oral taxon 780
str. F0422]
gi|341588982|gb|EGS32350.1| translation initiation factor IF-3 [Veillonella sp. oral taxon 780
str. F0422]
Length = 174
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 64/106 (60%), Gaps = 3/106 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYRYEQQK++K +KK LKE+K+ +I+ HD+ V+LK A KFL DG+KVKV +
Sbjct: 67 GKYRYEQQKREKEAKKKQKT--FTLKEVKLRPHIEDHDFYVKLKNAAKFLGDGNKVKVTI 124
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILV 113
+GRE + + ++ RF ++ + A E+ RN+ +IL
Sbjct: 125 MFRGRELSHPELGLNVLTRFAGELTDQAVVEKEAKLEGRNMTMILA 170
>gi|411117544|ref|ZP_11390031.1| bacterial translation initiation factor 3 (bIF-3) [Oscillatoriales
cyanobacterium JSC-12]
gi|410713647|gb|EKQ71148.1| bacterial translation initiation factor 3 (bIF-3) [Oscillatoriales
cyanobacterium JSC-12]
Length = 178
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 59/91 (64%), Gaps = 5/91 (5%)
Query: 29 NRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRF 88
+ +++KE+KM Y I++HDY VRL A++FL+DGDKVK V +GRE + ++A +L+ R
Sbjct: 90 HTVEVKEVKMRYKIEKHDYDVRLNQAKRFLQDGDKVKATVMFRGREIQHSDMAKDLLTRL 149
Query: 89 QNDVGELASEENKNF---RDRNIFIILVPNK 116
D+ E A E + F RN+ ++L P K
Sbjct: 150 ATDLQEFA--EVQQFPKQEGRNMMMLLAPKK 178
>gi|403237745|ref|ZP_10916331.1| translation initiation factor IF-3 [Bacillus sp. 10403023]
Length = 166
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+EQQKK+K +K +++KE+++ ID+HD++ +L+ A KFL+ GDKVK +
Sbjct: 58 GKFRFEQQKKEKEARKNQKV--INVKEVRLSPTIDEHDFNTKLRNAIKFLEKGDKVKASI 115
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I ++ RF E+A+ E+ D R++F++L P
Sbjct: 116 RFKGRAITHKEIGQRVLDRFSAACAEVATVESHPKMDGRSMFLVLAP 162
>gi|284048034|ref|YP_003398373.1| translation initiation factor IF-3 [Acidaminococcus fermentans DSM
20731]
gi|283952255|gb|ADB47058.1| translation initiation factor IF-3 [Acidaminococcus fermentans DSM
20731]
Length = 177
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 66/110 (60%), Gaps = 3/110 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY YEQQK++K +K+ +D+KE+K+ I+ HD+ V+ K A +FL+ GDKVKV +
Sbjct: 69 GKYLYEQQKREKEARKRQRT--IDVKEVKLRIRIEDHDFEVKTKNAIRFLQGGDKVKVTI 126
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVPNKA 117
+GRE + +L+ R + + E+A+ E K RN+ +I+ P +
Sbjct: 127 MFRGREMTHPELGEQLLNRMADQLQEIATVERKPKLEGRNMIMIVAPKSS 176
>gi|310640924|ref|YP_003945682.1| translation initiation factor if-3 [Paenibacillus polymyxa SC2]
gi|375307714|ref|ZP_09773001.1| translation initiation factor if-3 [Paenibacillus sp. Aloe-11]
gi|386040023|ref|YP_005958977.1| translation initiation factor IF-3 [Paenibacillus polymyxa M1]
gi|309245874|gb|ADO55441.1| translation initiation factor IF-3 [Paenibacillus polymyxa SC2]
gi|343096061|emb|CCC84270.1| translation initiation factor IF-3 [Paenibacillus polymyxa M1]
gi|375080045|gb|EHS58266.1| translation initiation factor if-3 [Paenibacillus sp. Aloe-11]
Length = 165
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+RYEQQKK+K +K +D+KE+ NI++HDY + + KFL +GDKVK V
Sbjct: 58 GKFRYEQQKKEKEARKNQKI--VDIKEVWFRSNIEEHDYQTKFRNVVKFLNEGDKVKCSV 115
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE N+ +++ R + +V +L + E R++ +IL P
Sbjct: 116 RFRGREITHANVGQKILERVKTEVADLCTVERQPKLEGRSMIMILAP 162
>gi|429735286|ref|ZP_19269255.1| translation initiation factor IF-3 [Selenomonas sp. oral taxon 138
str. F0429]
gi|429159398|gb|EKY01913.1| translation initiation factor IF-3 [Selenomonas sp. oral taxon 138
str. F0429]
Length = 187
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 75/129 (58%), Gaps = 14/129 (10%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+RYEQQK++K +KK + +KE+K+ NID+HD++V+LK A +F+++G+KVKV +
Sbjct: 59 GKFRYEQQKREKEAKKKQKT--ISIKEVKLRPNIDEHDFNVKLKNALRFVEEGNKVKVTI 116
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKALLQKAQEP-- 125
+GRE + ++ R + EL + E +N+ +IL P K Q+P
Sbjct: 117 MFRGRELSHPELGRAVLDRVAERMTELVTIERGAKLEGKNMTMILSP------KVQKPAK 170
Query: 126 ---PKKKDK 131
P K+DK
Sbjct: 171 TAKPAKEDK 179
>gi|399993248|ref|YP_006573488.1| translation initiation factor IF-3 [Phaeobacter gallaeciensis DSM
17395 = CIP 105210]
gi|400754836|ref|YP_006563204.1| translation initiation factor IF-3 [Phaeobacter gallaeciensis 2.10]
gi|398653989|gb|AFO87959.1| translation initiation factor IF-3 [Phaeobacter gallaeciensis 2.10]
gi|398657803|gb|AFO91769.1| translation initiation factor IF-3 [Phaeobacter gallaeciensis DSM
17395 = CIP 105210]
Length = 217
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YEQQK++ +KK +++KE+K N D HDY V+++ KFL++GDKVK+ +
Sbjct: 109 GKFKYEQQKRESEARKKQKI--IEVKEVKFRPNTDTHDYEVKMRNVYKFLENGDKVKITL 166
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVP 114
+GRE +N+ EL+ R D+ EL EN R + +++ P
Sbjct: 167 RFRGREMAHQNLGRELLLRVAEDIKELGKVENMPKMEGRQMIMMIGP 213
>gi|304436954|ref|ZP_07396917.1| translation initiation factor IF3 [Selenomonas sp. oral taxon 149
str. 67H29BP]
gi|304369905|gb|EFM23567.1| translation initiation factor IF3 [Selenomonas sp. oral taxon 149
str. 67H29BP]
Length = 188
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 67/107 (62%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+RYEQQK++K +KK + +KE+K+ NID+HD++V+LK A +F+++G+KVKV +
Sbjct: 59 GKFRYEQQKREKEAKKKQKT--ISIKEVKLRPNIDEHDFNVKLKNALRFVEEGNKVKVTI 116
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE + ++ R +G+L S E +N+ +IL P
Sbjct: 117 MFRGRELSHPELGRVVLDRVSERLGDLVSIERGAKLEGKNMTMILSP 163
>gi|114566617|ref|YP_753771.1| hypothetical protein Swol_1090 [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
gi|114337552|gb|ABI68400.1| bacterial translation initiation factor 3 (bIF-3) [Syntrophomonas
wolfei subsp. wolfei str. Goettingen]
Length = 179
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYR+EQ K++K +KK + +KE+KM NI++HD+ V+ K ARKFL GDKVK+ +
Sbjct: 59 GKYRFEQSKREKEARKKQRI--ISIKEVKMRPNIEEHDFQVKAKNARKFLSGGDKVKLTI 116
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE +I +L + + ++++ E+ RN+ ILVP
Sbjct: 117 MFRGREITHPDIGEKLSLKLTEQLSDISTIEKMPKVEGRNMVTILVP 163
>gi|323141059|ref|ZP_08075964.1| translation initiation factor IF-3 [Phascolarctobacterium
succinatutens YIT 12067]
gi|322414435|gb|EFY05249.1| translation initiation factor IF-3 [Phascolarctobacterium
succinatutens YIT 12067]
Length = 167
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 64/110 (58%), Gaps = 3/110 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYRYEQQK++K +KK D+KE+K+ I+ HD++V+ K A +FL+DGDKVKV +
Sbjct: 59 GKYRYEQQKREKEARKKQKT--FDIKEVKLRPGIEDHDFNVKYKNAVRFLEDGDKVKVTI 116
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVPNKA 117
+GRE + L+ R + E+A E +N+ +I+ P A
Sbjct: 117 MFRGRELSHPELGEVLLNRMAQQLKEIAVVERVPKLEGKNMIMIVAPKPA 166
>gi|420153044|ref|ZP_14660040.1| translation initiation factor IF-3 [Actinomyces massiliensis F0489]
gi|394761972|gb|EJF44283.1| translation initiation factor IF-3 [Actinomyces massiliensis F0489]
Length = 195
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE K + ++ A + LKE++ IDQHDY+ ++ +FLK GDKVK IV
Sbjct: 48 GKFKYESAMKARDARRNQANTQ--LKEIQFRPKIDQHDYATKMGHIERFLKGGDKVKCIV 105
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + I L++R ++ EL + E+ +D RN+ ++L P +
Sbjct: 106 RFRGREQSRPELGIRLLQRVAEEMDELGTVESHPRQDGRNMVMVLAPTR 154
>gi|86606784|ref|YP_475547.1| translation initiation factor IF-3 [Synechococcus sp. JA-3-3Ab]
gi|86555326|gb|ABD00284.1| translation initiation factor IF-3 [Synechococcus sp. JA-3-3Ab]
Length = 185
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Query: 32 DLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQND 91
++KE+K YNI +HDY VRL++A++FL DGDKVK V +GRE + + EL++R D
Sbjct: 98 EIKEVKFRYNIGEHDYHVRLRSAQQFLGDGDKVKATVMFRGREAQHAELGEELLQRLFKD 157
Query: 92 VGELASEENKNFRD-RNIFIILVPNKA 117
+ +A + ++ RNI +IL P K+
Sbjct: 158 LEGVAEMQQPPQKEGRNITMILSPKKS 184
>gi|425735476|ref|ZP_18853790.1| translation initiation factor IF-3 [Brevibacterium casei S18]
gi|425479882|gb|EKU47054.1| translation initiation factor IF-3 [Brevibacterium casei S18]
Length = 192
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 65/110 (59%), Gaps = 3/110 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YE +K + + +K+ AN LKE++ ID+HDY + +FL GDKVKV++
Sbjct: 46 GKYKYESAQKAR-EARKNQANTA-LKEIRFRLKIDEHDYETKKGHVTRFLSGGDKVKVMI 103
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNKA 117
+GRE + I+L+ R DV EL + E+ D RN+ +++ P+K+
Sbjct: 104 MFRGREQSRPEMGIKLLNRLAEDVSELGTVESAPRVDGRNMVMVIAPHKS 153
>gi|332653950|ref|ZP_08419694.1| translation initiation factor IF-3 [Ruminococcaceae bacterium D16]
gi|332517036|gb|EGJ46641.1| translation initiation factor IF-3 [Ruminococcaceae bacterium D16]
Length = 147
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 67/109 (61%), Gaps = 3/109 (2%)
Query: 10 KYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVN 69
KYR+EQ K++K +K +++KE++M +ID +D++V+L+ A+KFL +G++ KV V
Sbjct: 36 KYRFEQTKREKEARKNQRV--VEIKEIRMSPSIDVNDFNVKLRNAQKFLSEGNRCKVTVR 93
Query: 70 LKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILVPNKA 117
+GRE NI +L+ +F GE A +++ R++ I L P A
Sbjct: 94 FRGREMAHTNIGQDLLLKFAESCGETAVMDKSPKLEGRHMSIFLSPKPA 142
>gi|444916427|ref|ZP_21236543.1| Translation initiation factor 3 [Cystobacter fuscus DSM 2262]
gi|444712232|gb|ELW53161.1| Translation initiation factor 3 [Cystobacter fuscus DSM 2262]
Length = 200
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 69/117 (58%), Gaps = 3/117 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE++K+ +KK + LKE+K+ ++HDY +++ R+FL+DGDK KV++
Sbjct: 46 GKFKYEEKKRASEAKKKQVV--VHLKEIKLRPKTEEHDYEFKVRNVRRFLEDGDKAKVVI 103
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILVPNKALLQKAQE 124
+GRE + +++ D+ E+A E+ R +F+IL PN + Q+A+E
Sbjct: 104 QFRGREITHKEQGTTILQDVIQDLKEVAVVEQAPRMEGRLMFMILAPNPKVAQRARE 160
>gi|284802229|ref|YP_003414094.1| translation initiation factor IF-3 [Listeria monocytogenes 08-5578]
gi|284995371|ref|YP_003417139.1| translation initiation factor IF-3 [Listeria monocytogenes 08-5923]
gi|284057791|gb|ADB68732.1| translation initiation factor IF-3 [Listeria monocytogenes 08-5578]
gi|284060838|gb|ADB71777.1| translation initiation factor IF-3 [Listeria monocytogenes 08-5923]
Length = 167
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+EQQKK K +K M KE+++ ID+HD+ +L+ ARKFL+ GDKVK +
Sbjct: 59 GKFRFEQQKKDKEARKNQKVIVM--KEVRLSPTIDEHDFDTKLRKARKFLEKGDKVKCSI 116
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I +++ RF +L + E + D R++F++L P
Sbjct: 117 RFKGRAITHKEIGQKVLDRFAKACEDLCTIEQRPKMDGRSMFLVLAP 163
>gi|294084801|ref|YP_003551561.1| initiation factor 3 [Candidatus Puniceispirillum marinum IMCC1322]
gi|292664376|gb|ADE39477.1| Initiation factor 3 [Candidatus Puniceispirillum marinum IMCC1322]
Length = 171
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YE QK+ +KK +++KE+K+ NID+HDY V+++A KFL GDKVKV +
Sbjct: 66 GKYKYEAQKRANETRKKQKI--IEVKEIKLRPNIDEHDYQVKMRAVNKFLGSGDKVKVTL 123
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE + + +++R +++ ++A E + R + +++ P
Sbjct: 124 RFRGREMAHQELGANVLKRVRDETEDVAKVESHPKMEGRQMIMVIAP 170
>gi|46203017|ref|ZP_00052215.2| COG0290: Translation initiation factor 3 (IF-3) [Magnetospirillum
magnetotacticum MS-1]
Length = 173
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 68/107 (63%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
++R+ +QKK+ +K+ +++KE+K+ ID+HDY V++KA ++F ++GDKVKV +
Sbjct: 68 GRFRFNEQKKQNEARKRQKT--VEVKEIKLRPGIDKHDYEVKMKAVQRFFEEGDKVKVTL 125
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKN-FRDRNIFIILVP 114
+GRE ++I + L+ R + + E+A E++ R + +IL P
Sbjct: 126 RFRGREIAHQDIGLRLLERVKQETQEIAKVESEPMLEGRQMIMILAP 172
>gi|365826261|ref|ZP_09368204.1| translation initiation factor IF-3 [Actinomyces graevenitzii C83]
gi|365257058|gb|EHM87136.1| translation initiation factor IF-3 [Actinomyces graevenitzii C83]
Length = 190
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YE K + ++ A + LKE++ ID HDY+ + +FLK GDKVK IV
Sbjct: 48 GKYKYESAMKARDARRNQANTQ--LKEIQFRPKIDDHDYATKRGHVERFLKGGDKVKAIV 105
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + I L++R +V ELA+ E+ +D R++ ++L P +
Sbjct: 106 RFRGREQSRPELGIRLLQRLAEEVSELATVESHPRQDGRSMVMVLAPTR 154
>gi|209551835|ref|YP_002283752.1| translation initiation factor IF-3 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|238054433|sp|B5ZXR7.1|IF3_RHILW RecName: Full=Translation initiation factor IF-3
gi|209537591|gb|ACI57526.1| translation initiation factor IF-3 [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 178
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y QKK +KK +++KE+KM NID HDY V++KA +F +GDKVKV
Sbjct: 72 LGKLKYANQKKAAEARKKQKI--VEVKEIKMRPNIDTHDYEVKMKAMGRFFDEGDKVKVT 129
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE + + ++L+++ + D E A E R + ++L P
Sbjct: 130 LKFRGREMAHQELGMKLLQQVKADTTEFAKVEAEPKLEGRQMMMVLAP 177
>gi|431806413|ref|YP_007233314.1| translation initiation factor 3 [Liberibacter crescens BT-1]
gi|430800388|gb|AGA65059.1| Translation initiation factor 3 [Liberibacter crescens BT-1]
Length = 162
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 65/108 (60%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y QKK +KK +++KE+KM NID HDY V++KA R+F +DG KVK+
Sbjct: 56 LGKLKYSNQKKAAEARKKQKI--IEVKEIKMRPNIDTHDYEVKMKAMRRFFEDGHKVKLT 113
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE +++ ++L + ++ + ++A E + R + ++L P
Sbjct: 114 LKFRGREMAHQDLGMKLFMKIKDQIQDVAKVETDPKLEGRQVMMVLAP 161
>gi|402847862|ref|ZP_10896131.1| Translation initiation factor 3 [Rhodovulum sp. PH10]
gi|402501912|gb|EJW13555.1| Translation initiation factor 3 [Rhodovulum sp. PH10]
Length = 162
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++Y++QKK+ +K+ +++KE+K ID HDY V+++A +F +DGDKVKV +
Sbjct: 57 GKFKYQEQKKQAEARKRQKI--VEVKEVKFRPMIDDHDYDVKMRAMIRFFEDGDKVKVTL 114
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE + + +L+ R + D ELA E++ R + ++L P
Sbjct: 115 RFRGREMAHQELGFQLLNRVKGDTSELAKVEQDAKMEGRQMVMVLAP 161
>gi|315282775|ref|ZP_07871105.1| translation initiation factor IF-3 [Listeria marthii FSL S4-120]
gi|313613579|gb|EFR87393.1| translation initiation factor IF-3 [Listeria marthii FSL S4-120]
Length = 189
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+EQQKK K +K + +KE+++ ID+HD+ +L+ ARKFL+ GDKVK +
Sbjct: 81 GKFRFEQQKKDKEARKNQKV--IVMKEVRLSPTIDEHDFDTKLRNARKFLEKGDKVKCSI 138
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I +++ RF +L + E + D R++F++L P
Sbjct: 139 RFKGRAITHKEIGQKVLDRFAKACEDLCTIEQRPKMDGRSMFLVLAP 185
>gi|126729631|ref|ZP_01745444.1| translation initiation factor IF-3 [Sagittula stellata E-37]
gi|126709750|gb|EBA08803.1| translation initiation factor IF-3 [Sagittula stellata E-37]
Length = 137
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 65/111 (58%), Gaps = 3/111 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
K++YEQQK++ +KK +++KE+K D HDY V+++ KFL++GDKVKV
Sbjct: 28 FGKFKYEQQKRESEARKKQKI--IEVKEVKFRPGTDIHDYQVKMRNVMKFLENGDKVKVT 85
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVPNKA 117
+ +GRE +N+ EL+ R +DV E+ EN R + +++ P A
Sbjct: 86 LRFRGREMAHQNLGRELLERVADDVKEIGKVENMPKMEGRQMVMMIGPAPA 136
>gi|94495623|ref|ZP_01302203.1| translation initiation factor IF-3 [Sphingomonas sp. SKA58]
gi|94425011|gb|EAT10032.1| translation initiation factor IF-3 [Sphingomonas sp. SKA58]
Length = 140
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 61/111 (54%), Gaps = 3/111 (2%)
Query: 5 YFFLSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKV 64
+ + K++YE QKK +K +LKE+KM NID HDY ++K F+ DGDKV
Sbjct: 31 FLDIGKFKYEAQKKANIARKTQKTQ--ELKEIKMRPNIDDHDYETKMKKVHDFIGDGDKV 88
Query: 65 KVIVNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
K+ + +GRE + + + L++R +V E+A E R + ++L P
Sbjct: 89 KITLRFRGRELSHQQLGMNLLQRVAENVQEIAKVEAYPRMEGRQMLMVLAP 139
>gi|11465469|ref|NP_045140.1| translation initiation factor 3 [Cyanidium caldarium]
gi|14194842|sp|Q9TLX8.1|IF3C_CYACA RecName: Full=Translation initiation factor IF-3, chloroplastic
gi|6466372|gb|AAF12954.1|AF022186_77 unknown [Cyanidium caldarium]
Length = 185
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 64/101 (63%), Gaps = 4/101 (3%)
Query: 15 QQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRE 74
+++ K+G++K+S A +KE+KM Y I++HDY RL A KFLK G+KVKV + KGRE
Sbjct: 82 EKRVKEGRKKQSGAL---VKEVKMTYKINEHDYETRLNQAFKFLKSGNKVKVTLTFKGRE 138
Query: 75 NEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
+ ++ L+ R D+ ++A + ++D + + +IL P
Sbjct: 139 IQHLSLGTMLLNRLMTDLQQIAEVKRSPYQDGKTMILILTP 179
>gi|398830769|ref|ZP_10588950.1| translation initiation factor IF-3 [Phyllobacterium sp. YR531]
gi|398213349|gb|EJM99942.1| translation initiation factor IF-3 [Phyllobacterium sp. YR531]
Length = 170
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y+ QKK +KK +++KE+KM NID HDY V+++A ++F ++GDKVKV
Sbjct: 64 LGKLKYQGQKKAAEARKKQKT--VEIKEIKMRPNIDTHDYDVKMRAIKRFFEEGDKVKVT 121
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE + + + L+ + + D E++ E R + ++L P
Sbjct: 122 LRFRGREMAHQELGMRLLDKVKEDTVEISKVEAEPKLEGRQMMMVLAP 169
>gi|424909189|ref|ZP_18332566.1| translation initiation factor IF-3 [Rhizobium leguminosarum bv.
viciae USDA 2370]
gi|392845220|gb|EJA97742.1| translation initiation factor IF-3 [Rhizobium leguminosarum bv.
viciae USDA 2370]
Length = 178
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y QKK +KK +++KE+KM NID HDY V++KA +F +DGDKVKV
Sbjct: 72 LGKLKYATQKKAAEARKKQKI--VEVKEIKMRPNIDTHDYDVKMKAMGRFFEDGDKVKVT 129
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE + + ++L+ + + D +A E R + ++L P
Sbjct: 130 LKFRGREMAHQELGMKLLLQVKEDTQAIAKVEAEPKLEGRQMMMVLAP 177
>gi|424889072|ref|ZP_18312675.1| translation initiation factor IF-3 [Rhizobium leguminosarum bv.
trifolii WSM2012]
gi|424897866|ref|ZP_18321440.1| translation initiation factor IF-3 [Rhizobium leguminosarum bv.
trifolii WSM2297]
gi|393174621|gb|EJC74665.1| translation initiation factor IF-3 [Rhizobium leguminosarum bv.
trifolii WSM2012]
gi|393182093|gb|EJC82132.1| translation initiation factor IF-3 [Rhizobium leguminosarum bv.
trifolii WSM2297]
Length = 168
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y QKK +KK +++KE+KM NID HDY V++KA +F +GDKVKV
Sbjct: 62 LGKLKYANQKKAAEARKKQKI--VEVKEIKMRPNIDTHDYEVKMKAMGRFFDEGDKVKVT 119
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE + + ++L+++ + D E A E R + ++L P
Sbjct: 120 LKFRGREMAHQELGMKLLQQVKADTTEFAKVEAEPKLEGRQMMMVLAP 167
>gi|350566969|ref|ZP_08935583.1| translation initiation factor IF3 [Peptoniphilus indolicus ATCC
29427]
gi|348659938|gb|EGY76653.1| translation initiation factor IF3 [Peptoniphilus indolicus ATCC
29427]
Length = 177
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YE KK++ +KK +++KE+++ NI++HD ++K A+KFL +GD+VKV V
Sbjct: 68 GKYKYEMIKKERDSKKKQRV--INIKEVRLTPNIEKHDLETKVKHAKKFLSNGDRVKVAV 125
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVPNK 116
+GRE I E++ RF V E + + K RN+ + L PNK
Sbjct: 126 RFRGREMGHTEIGKEVLDRFVEMVSESGTVDKKPKLEGRNMIMFLAPNK 174
>gi|347526530|ref|YP_004833277.1| translation initiation factor IF-3 [Sphingobium sp. SYK-6]
gi|345135211|dbj|BAK64820.1| translation initiation factor IF-3 [Sphingobium sp. SYK-6]
Length = 178
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 61/111 (54%), Gaps = 3/111 (2%)
Query: 5 YFFLSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKV 64
+ + KY+YE QKK +K +LKE+KM NID HDY ++K F+ +GDKV
Sbjct: 69 FLDIGKYKYEAQKKANIARKTQKTQ--ELKEIKMRPNIDDHDYDTKMKKVHDFIGEGDKV 126
Query: 65 KVIVNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
K+ + +GRE + + + L++R +V E+A E R + ++L P
Sbjct: 127 KITLRFRGRELAHQQLGMALLQRVAENVTEIAKVEAYPRMEGRQMLMVLAP 177
>gi|323356733|ref|YP_004223129.1| translation initiation factor 3 (IF-3) [Microbacterium testaceum
StLB037]
gi|323273104|dbj|BAJ73249.1| translation initiation factor 3 (IF-3) [Microbacterium testaceum
StLB037]
Length = 236
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE +K K + +++ AN + LKE++ I+ HDY +LK A FL+ GDKVK ++
Sbjct: 90 GKFKYEAAQKAK-ETRRNQANTV-LKEVRFRLKIEAHDYITKLKRAEGFLQAGDKVKAMI 147
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNK 116
+GRE + L+R+F DV E + E N RN+ +++ P+K
Sbjct: 148 LFRGREQSRPEQGVRLLRKFAEDVAEFGTVESNPTIDGRNMVMVVAPHK 196
>gi|218529881|ref|YP_002420697.1| translation initiation factor IF-3 [Methylobacterium extorquens
CM4]
gi|240138185|ref|YP_002962657.1| translation initiation factor IF-3 [Methylobacterium extorquens
AM1]
gi|254560745|ref|YP_003067840.1| translation initiation factor IF-3 [Methylobacterium extorquens
DM4]
gi|418061391|ref|ZP_12699253.1| Translation initiation factor IF-3 [Methylobacterium extorquens DSM
13060]
gi|259491507|sp|B7KV98.1|IF3_METC4 RecName: Full=Translation initiation factor IF-3
gi|218522184|gb|ACK82769.1| translation initiation factor IF-3 [Methylobacterium extorquens
CM4]
gi|240008154|gb|ACS39380.1| Translation initiation factor IF-3 [Methylobacterium extorquens
AM1]
gi|254268023|emb|CAX23894.1| Translation initiation factor IF-3 [Methylobacterium extorquens
DM4]
gi|373565055|gb|EHP91122.1| Translation initiation factor IF-3 [Methylobacterium extorquens DSM
13060]
Length = 173
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 68/107 (63%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
++R+ +QKK+ +K+ +++KE+K+ ID+HDY V++KA ++F ++GDKVKV +
Sbjct: 68 GRFRFNEQKKQNEARKRQKT--VEVKEIKLRPGIDKHDYEVKMKAVQRFFEEGDKVKVTL 125
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKN-FRDRNIFIILVP 114
+GRE ++I + L+ R + + E+A E++ R + +IL P
Sbjct: 126 RFRGREIAHQDIGLRLLERVKQETQEIAKVESEPMLEGRQMIMILAP 172
>gi|392379110|ref|YP_004986269.1| translation initiation factor IF-3 [Azospirillum brasilense Sp245]
gi|356881477|emb|CCD02464.1| translation initiation factor IF-3 [Azospirillum brasilense Sp245]
Length = 144
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 69/107 (64%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
++R+E+QKK +KK +++KELK+ NID HDY V+++AAR+FL++GDKVK+ +
Sbjct: 39 GRFRFEEQKKANEARKKQKI--IEIKELKLRPNIDDHDYDVKMRAARRFLEEGDKVKMTM 96
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE +++ + ++ R ++ ++A E+ R + +++ P
Sbjct: 97 RFRGREMAHQDLGMNVLIRVRDQFEDIAKVEQMPRMEGRMMVMVIAP 143
>gi|311031378|ref|ZP_07709468.1| translation initiation factor IF-3 [Bacillus sp. m3-13]
Length = 167
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+EQQKK K +K + LKE+++ ID+HD++ +L+ A KFL+ GDKVK +
Sbjct: 59 GKFRFEQQKKDKEARKNQKV--ISLKEVRLSPTIDEHDFNTKLRNAIKFLEKGDKVKASI 116
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
KGR + I ++ RF E+++ E + R++F+IL P
Sbjct: 117 RFKGRAITHKEIGQRVLDRFSAACAEVSTIESHPKMDGRSMFLILAP 163
>gi|424915936|ref|ZP_18339300.1| translation initiation factor IF-3 [Rhizobium leguminosarum bv.
trifolii WSM597]
gi|392852112|gb|EJB04633.1| translation initiation factor IF-3 [Rhizobium leguminosarum bv.
trifolii WSM597]
Length = 195
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y QKK +KK +++KE+KM NID HDY V++KA +F +GDKVKV
Sbjct: 89 LGKLKYANQKKAAEARKKQKI--VEVKEIKMRPNIDTHDYEVKMKAMGRFFDEGDKVKVT 146
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE + + ++L+++ + D E A E R + ++L P
Sbjct: 147 LKFRGREMAHQELGMKLLQQVKADTTEFAKVEAEPKLEGRQMMMVLAP 194
>gi|418299258|ref|ZP_12911093.1| translation initiation factor IF-3 [Agrobacterium tumefaciens
CCNWGS0286]
gi|355535552|gb|EHH04840.1| translation initiation factor IF-3 [Agrobacterium tumefaciens
CCNWGS0286]
Length = 134
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 61/108 (56%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y QKK +KK +++KE+KM NID HDY V++KA +F DGDKVKV
Sbjct: 28 LGKLKYSTQKKAAEARKKQKI--VEVKEIKMRPNIDTHDYDVKMKAMGRFFDDGDKVKVT 85
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE + + ++L+ + + D +A E R + ++L P
Sbjct: 86 LKFRGREMAHQELGMKLLLQVKEDTQAIAKVEAEPKLEGRQMMMVLAP 133
>gi|315604407|ref|ZP_07879473.1| translation initiation factor IF3 [Actinomyces sp. oral taxon 180
str. F0310]
gi|315314113|gb|EFU62164.1| translation initiation factor IF3 [Actinomyces sp. oral taxon 180
str. F0310]
Length = 195
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YE +K + ++ A + LKE++ ID HD+ V+ +FL GDKVKV++
Sbjct: 45 GKYKYEAAQKARDARRNQANTQ--LKEIRFRLKIDDHDFGVKKGHVERFLSAGDKVKVMI 102
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + L++R ++GELA+ E+ +D RN+ ++L P K
Sbjct: 103 MFRGREQSRPEAGVRLLQRLAEEIGELATVESMPRQDGRNMTMVLAPTK 151
>gi|405376772|ref|ZP_11030724.1| translation initiation factor IF-3 [Rhizobium sp. CF142]
gi|397326672|gb|EJJ30985.1| translation initiation factor IF-3 [Rhizobium sp. CF142]
Length = 203
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y QKK +KK +++KE+KM NID HDY V++KA +F +GDKVKV
Sbjct: 97 LGKLKYANQKKAAEARKKQKI--VEVKEIKMRPNIDTHDYEVKMKAMGRFFDEGDKVKVT 154
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE + + ++L+++ + D E+A E R + ++L P
Sbjct: 155 LKFRGREMAHQELGMKLLQQVKADTLEIAKVEAEPKLEGRQMMMVLAP 202
>gi|315641763|ref|ZP_07896777.1| translation initiation factor IF3 [Enterococcus italicus DSM 15952]
gi|315482526|gb|EFU73064.1| translation initiation factor IF3 [Enterococcus italicus DSM 15952]
Length = 173
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYR+EQQKK++ +KK + +KE+++ ID +D++ +L+ ARKFL+ GDKVK +
Sbjct: 65 GKYRFEQQKKEREARKKQKV--ISVKEVRLSPTIDVNDFNTKLRNARKFLEKGDKVKASI 122
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I ++ R + ++A+ E K D R++F++L P
Sbjct: 123 RFKGRAITHKEIGQRVLDRLAEETADVATVEQKAKMDGRSMFLVLAP 169
>gi|226224388|ref|YP_002758495.1| translation initiation factor IF-3 [Listeria monocytogenes serotype
4b str. CLIP 80459]
gi|225876850|emb|CAS05559.1| translation initiation factor IF-3 [Listeria monocytogenes serotype
4b str. CLIP 80459]
Length = 178
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+EQQKK K +K M KE+++ ID+HD+ +L+ ARKFL+ GDKVK +
Sbjct: 70 GKFRFEQQKKDKEARKNQKVIVM--KEVRLSPTIDEHDFDTKLRNARKFLEKGDKVKCSI 127
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I +++ RF +L + E + D R++F++L P
Sbjct: 128 RFKGRAITHKEIGQKVLDRFAKACEDLCTIEQRPKMDGRSMFLVLAP 174
>gi|452990464|emb|CCQ98364.1| initiation factor IF-3 [Clostridium ultunense Esp]
Length = 166
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYR+EQ KK+K +KK +++KE++ I++HD+S +L+ FL+ GDKVK +
Sbjct: 61 GKYRFEQSKKEKEARKKQKV--INMKEVRFSATIEEHDFSTKLRHVISFLEKGDKVKCTL 118
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVP 114
KGR+ I + ++ R + E+AS E K R++ +IL P
Sbjct: 119 RFKGRQITHSQIGVNVMNRIMEETKEIASVEKKPGIEGRSMIMILAP 165
>gi|92115709|ref|YP_575438.1| translation initiation factor IF-3 [Nitrobacter hamburgensis X14]
gi|91798603|gb|ABE60978.1| bacterial translation initiation factor 3 (bIF-3) [Nitrobacter
hamburgensis X14]
Length = 171
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 67/107 (62%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+++ QKK +K+ +++KE+K+ ID HDY+V++KA ++F ++GDKVK+ +
Sbjct: 66 GKYKFQAQKKAAEARKRQKI--VEIKEIKLRPMIDDHDYNVKMKAMQRFFEEGDKVKITL 123
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE ++I +L+ + + DV A E++ F R + ++L P
Sbjct: 124 RYRGREMAHQDIGTKLLDKVKTDVAAYAKVEQDARFEGRQVVMVLAP 170
>gi|16800963|ref|NP_471231.1| translation initiation factor IF-3 [Listeria innocua Clip11262]
gi|16803825|ref|NP_465310.1| translation initiation factor IF-3 [Listeria monocytogenes EGD-e]
gi|46908015|ref|YP_014404.1| translation initiation factor IF-3 [Listeria monocytogenes serotype
4b str. F2365]
gi|347549183|ref|YP_004855511.1| putative translation initiation factor IF-3 [Listeria ivanovii
subsp. ivanovii PAM 55]
gi|61213118|sp|Q71YN3.1|IF3_LISMF RecName: Full=Translation initiation factor IF-3
gi|61226338|sp|P0A3L1.1|IF3_LISMO RecName: Full=Translation initiation factor IF-3
gi|61226339|sp|P0A3L2.1|IF3_LISIN RecName: Full=Translation initiation factor IF-3
gi|2879775|emb|CAA68920.1| translation initiation factor, IF3 [Listeria monocytogenes]
gi|16411239|emb|CAC99863.1| translation initiation factor IF-3 [Listeria monocytogenes EGD-e]
gi|16414398|emb|CAC97127.1| translation initiation factor IF-3 [Listeria innocua Clip11262]
gi|46881285|gb|AAT04581.1| translation initiation factor IF-3 [Listeria monocytogenes serotype
4b str. F2365]
gi|346982254|emb|CBW86248.1| Putative translation initiation factor IF-3 [Listeria ivanovii
subsp. ivanovii PAM 55]
Length = 171
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+EQQKK K +K M KE+++ ID+HD+ +L+ ARKFL+ GDKVK +
Sbjct: 63 GKFRFEQQKKDKEARKNQKVIVM--KEVRLSPTIDEHDFDTKLRNARKFLEKGDKVKCSI 120
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I +++ RF +L + E + D R++F++L P
Sbjct: 121 RFKGRAITHKEIGQKVLDRFAKACEDLCTIEQRPKMDGRSMFLVLAP 167
>gi|398305986|ref|ZP_10509572.1| translation initiation factor IF-3 [Bacillus vallismortis DV1-F-3]
Length = 167
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+EQQKK K +K ++LKE+++ ID+HD++ +L+ A KFL+ GDKVK +
Sbjct: 58 GKFRFEQQKKDKEARKNQKI--INLKEVRLSPTIDEHDFNTKLRNAIKFLEKGDKVKASI 115
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I ++ RF ++A+ E K D R++F++L P
Sbjct: 116 RFKGRAITHKEIGQRVLDRFSEACADVATVETKPKMDGRSMFLMLAP 162
>gi|392407264|ref|YP_006443872.1| translation initiation factor IF-3 [Anaerobaculum mobile DSM 13181]
gi|390620400|gb|AFM21547.1| translation initiation factor IF-3 [Anaerobaculum mobile DSM 13181]
Length = 166
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 69/121 (57%), Gaps = 6/121 (4%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYRY+QQK+ K +KK +KE+KM ID+HDY+ ++KA ++FL++G +VKV V
Sbjct: 46 GKYRYQQQKRDKEARKKQKTQ--TIKEIKMRPKIDEHDYNFKVKAIKEFLREGHRVKVSV 103
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILVPNKALLQKAQEPPK 127
+GRE F + E++ R + L E R + I+LVP + QKA+ P
Sbjct: 104 FFRGREMSFLDKGREVLERVAKECDGLGKPEAEPKMEGRYMRIMLVP---VQQKAEAKPS 160
Query: 128 K 128
K
Sbjct: 161 K 161
>gi|258544547|ref|ZP_05704781.1| translation initiation factor IF-3 [Cardiobacterium hominis ATCC
15826]
gi|258520178|gb|EEV89037.1| translation initiation factor IF-3 [Cardiobacterium hominis ATCC
15826]
Length = 135
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+EQQKK+ Q+ + R+ +KE+K D+ DY V+L+ +FL DGDK KV V
Sbjct: 29 GKFRFEQQKKQ--QEARKNQKRIQIKEIKFRPGTDEGDYQVKLRNLNRFLADGDKAKVTV 86
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVPNK 116
+GRE + + EL+ R + D+ E+ E K R + ++ P K
Sbjct: 87 RFRGREMAHQGLGQELLTRIEADLAEVGVVEQKAGMEGRQMVMVFAPKK 135
>gi|116873222|ref|YP_850003.1| translation initiation factor IF-3 [Listeria welshimeri serovar 6b
str. SLCC5334]
gi|217964067|ref|YP_002349745.1| translation initiation factor IF-3 [Listeria monocytogenes HCC23]
gi|254826389|ref|ZP_05231390.1| translation initiation factor IF-3 [Listeria monocytogenes FSL
J1-194]
gi|254829585|ref|ZP_05234272.1| translation initiation factor IF-3 [Listeria monocytogenes FSL
N3-165]
gi|254854526|ref|ZP_05243874.1| translation initiation factor IF-3 [Listeria monocytogenes FSL
R2-503]
gi|254933634|ref|ZP_05266993.1| translation initiation factor IF-3 [Listeria monocytogenes HPB2262]
gi|254938393|ref|ZP_05270090.1| translation initiation factor IF-3 [Listeria monocytogenes F6900]
gi|254993708|ref|ZP_05275898.1| translation initiation factor IF-3 [Listeria monocytogenes FSL
J2-064]
gi|255028319|ref|ZP_05300270.1| translation initiation factor IF-3 [Listeria monocytogenes LO28]
gi|255521083|ref|ZP_05388320.1| translation initiation factor IF-3 [Listeria monocytogenes FSL
J1-175]
gi|290893087|ref|ZP_06556076.1| translation initiation factor IF-3 [Listeria monocytogenes FSL
J2-071]
gi|300766431|ref|ZP_07076386.1| translation initiation factor IF-3 [Listeria monocytogenes FSL
N1-017]
gi|386008555|ref|YP_005926833.1| translation initiation factor IF-3 [Listeria monocytogenes L99]
gi|386027160|ref|YP_005947936.1| translation initiation factor IF3 [Listeria monocytogenes M7]
gi|386044093|ref|YP_005962898.1| translation initiation factor IF-3 [Listeria monocytogenes 10403S]
gi|386047437|ref|YP_005965769.1| translation initiation factor IF-3 [Listeria monocytogenes J0161]
gi|386050762|ref|YP_005968753.1| translation initiation factor IF-3 [Listeria monocytogenes FSL
R2-561]
gi|386732524|ref|YP_006206020.1| translation initiation factor IF-3 [Listeria monocytogenes
07PF0776]
gi|404284281|ref|YP_006685178.1| translation initiation factor IF-3 [Listeria monocytogenes
SLCC2372]
gi|404413863|ref|YP_006699450.1| translation initiation factor IF-3 [Listeria monocytogenes
SLCC7179]
gi|405750135|ref|YP_006673601.1| translation initiation factor IF-3 [Listeria monocytogenes ATCC
19117]
gi|405753010|ref|YP_006676475.1| translation initiation factor IF-3 [Listeria monocytogenes
SLCC2378]
gi|405758836|ref|YP_006688112.1| translation initiation factor IF-3 [Listeria monocytogenes
SLCC2479]
gi|406704567|ref|YP_006754921.1| translation initiation factor IF-3 [Listeria monocytogenes L312]
gi|417317889|ref|ZP_12104492.1| translation initiation factor IF-3 [Listeria monocytogenes J1-220]
gi|422410029|ref|ZP_16486990.1| translation initiation factor IF-3 [Listeria monocytogenes FSL
F2-208]
gi|422809867|ref|ZP_16858278.1| Translation initiation factor 3 [Listeria monocytogenes FSL J1-208]
gi|423100918|ref|ZP_17088623.1| translation initiation factor IF-3 [Listeria innocua ATCC 33091]
gi|424823545|ref|ZP_18248558.1| Translation initiation factor IF-3 [Listeria monocytogenes str.
Scott A]
gi|116742100|emb|CAK21224.1| translation initiation factor IF-3 [Listeria welshimeri serovar 6b
str. SLCC5334]
gi|217333337|gb|ACK39131.1| translation initiation factor IF-3 [Listeria monocytogenes HCC23]
gi|258602002|gb|EEW15327.1| translation initiation factor IF-3 [Listeria monocytogenes FSL
N3-165]
gi|258607926|gb|EEW20534.1| translation initiation factor IF-3 [Listeria monocytogenes FSL
R2-503]
gi|258611005|gb|EEW23613.1| translation initiation factor IF-3 [Listeria monocytogenes F6900]
gi|290557447|gb|EFD90972.1| translation initiation factor IF-3 [Listeria monocytogenes FSL
J2-071]
gi|293585197|gb|EFF97229.1| translation initiation factor IF-3 [Listeria monocytogenes HPB2262]
gi|293595629|gb|EFG03390.1| translation initiation factor IF-3 [Listeria monocytogenes FSL
J1-194]
gi|300512855|gb|EFK39947.1| translation initiation factor IF-3 [Listeria monocytogenes FSL
N1-017]
gi|307571365|emb|CAR84544.1| translation initiation factor IF-3 [Listeria monocytogenes L99]
gi|313608207|gb|EFR84232.1| translation initiation factor IF-3 [Listeria monocytogenes FSL
F2-208]
gi|328473852|gb|EGF44682.1| translation initiation factor IF-3 [Listeria monocytogenes J1-220]
gi|332312225|gb|EGJ25320.1| Translation initiation factor IF-3 [Listeria monocytogenes str.
Scott A]
gi|336023741|gb|AEH92878.1| translation initiation factor IF3 [Listeria monocytogenes M7]
gi|345534428|gb|AEO03869.1| translation initiation factor IF-3 [Listeria monocytogenes J0161]
gi|345537327|gb|AEO06767.1| translation initiation factor IF-3 [Listeria monocytogenes 10403S]
gi|346424608|gb|AEO26133.1| translation initiation factor IF-3 [Listeria monocytogenes FSL
R2-561]
gi|370792560|gb|EHN60424.1| translation initiation factor IF-3 [Listeria innocua ATCC 33091]
gi|378752068|gb|EHY62655.1| Translation initiation factor 3 [Listeria monocytogenes FSL J1-208]
gi|384391282|gb|AFH80352.1| translation initiation factor IF-3 [Listeria monocytogenes
07PF0776]
gi|404219335|emb|CBY70699.1| translation initiation factor IF-3 [Listeria monocytogenes ATCC
19117]
gi|404222210|emb|CBY73573.1| translation initiation factor IF-3 [Listeria monocytogenes
SLCC2378]
gi|404233783|emb|CBY55186.1| translation initiation factor IF-3 [Listeria monocytogenes
SLCC2372]
gi|404236718|emb|CBY58120.1| translation initiation factor IF-3 [Listeria monocytogenes
SLCC2479]
gi|404239562|emb|CBY60963.1| translation initiation factor IF-3 [Listeria monocytogenes
SLCC7179]
gi|406361597|emb|CBY67870.1| translation initiation factor IF-3 [Listeria monocytogenes L312]
Length = 167
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+EQQKK K +K M KE+++ ID+HD+ +L+ ARKFL+ GDKVK +
Sbjct: 59 GKFRFEQQKKDKEARKNQKVIVM--KEVRLSPTIDEHDFDTKLRNARKFLEKGDKVKCSI 116
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I +++ RF +L + E + D R++F++L P
Sbjct: 117 RFKGRAITHKEIGQKVLDRFAKACEDLCTIEQRPKMDGRSMFLVLAP 163
>gi|47094154|ref|ZP_00231874.1| translation initiation factor IF-3 [Listeria monocytogenes str. 4b
H7858]
gi|289435125|ref|YP_003464997.1| translation initiation factor IF-3 [Listeria seeligeri serovar 1/2b
str. SLCC3954]
gi|293596760|ref|ZP_05264091.2| translation initiation factor IF-3 [Listeria monocytogenes J2818]
gi|315303674|ref|ZP_07874199.1| translation initiation factor IF-3 [Listeria ivanovii FSL F6-596]
gi|404281395|ref|YP_006682293.1| translation initiation factor IF-3 [Listeria monocytogenes
SLCC2755]
gi|404287213|ref|YP_006693799.1| translation initiation factor IF-3 [Listeria monocytogenes serotype
7 str. SLCC2482]
gi|404408226|ref|YP_006690941.1| translation initiation factor IF-3 [Listeria monocytogenes
SLCC2376]
gi|404411086|ref|YP_006696674.1| translation initiation factor IF-3 [Listeria monocytogenes
SLCC5850]
gi|405755944|ref|YP_006679408.1| translation initiation factor IF-3 [Listeria monocytogenes
SLCC2540]
gi|422413326|ref|ZP_16490285.1| translation initiation factor IF-3 [Listeria innocua FSL S4-378]
gi|422416300|ref|ZP_16493257.1| translation initiation factor IF-3 [Listeria innocua FSL J1-023]
gi|422419406|ref|ZP_16496361.1| translation initiation factor IF-3 [Listeria seeligeri FSL N1-067]
gi|422422490|ref|ZP_16499443.1| translation initiation factor IF-3 [Listeria seeligeri FSL S4-171]
gi|424714662|ref|YP_007015377.1| Translation initiation factor IF-3 [Listeria monocytogenes serotype
4b str. LL195]
gi|47017479|gb|EAL08292.1| translation initiation factor IF-3 [Listeria monocytogenes str. 4b
H7858]
gi|289171369|emb|CBH27911.1| translation initiation factor IF-3 [Listeria seeligeri serovar 1/2b
str. SLCC3954]
gi|293592099|gb|EFG00434.1| translation initiation factor IF-3 [Listeria monocytogenes J2818]
gi|313618353|gb|EFR90389.1| translation initiation factor IF-3 [Listeria innocua FSL S4-378]
gi|313623316|gb|EFR93548.1| translation initiation factor IF-3 [Listeria innocua FSL J1-023]
gi|313627964|gb|EFR96572.1| translation initiation factor IF-3 [Listeria ivanovii FSL F6-596]
gi|313632797|gb|EFR99753.1| translation initiation factor IF-3 [Listeria seeligeri FSL N1-067]
gi|313637378|gb|EFS02856.1| translation initiation factor IF-3 [Listeria seeligeri FSL S4-171]
gi|404225144|emb|CBY76506.1| translation initiation factor IF-3 [Listeria monocytogenes
SLCC2540]
gi|404228030|emb|CBY49435.1| translation initiation factor IF-3 [Listeria monocytogenes
SLCC2755]
gi|404230912|emb|CBY52316.1| translation initiation factor IF-3 [Listeria monocytogenes
SLCC5850]
gi|404242375|emb|CBY63775.1| translation initiation factor IF-3 [Listeria monocytogenes
SLCC2376]
gi|404246142|emb|CBY04367.1| translation initiation factor IF-3 [Listeria monocytogenes serotype
7 str. SLCC2482]
gi|424013846|emb|CCO64386.1| Translation initiation factor IF-3 [Listeria monocytogenes serotype
4b str. LL195]
gi|441471539|emb|CCQ21294.1| Translation initiation factor IF-3 [Listeria monocytogenes]
gi|441474670|emb|CCQ24424.1| Translation initiation factor IF-3 [Listeria monocytogenes N53-1]
Length = 189
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+EQQKK K +K M KE+++ ID+HD+ +L+ ARKFL+ GDKVK +
Sbjct: 81 GKFRFEQQKKDKEARKNQKVIVM--KEVRLSPTIDEHDFDTKLRNARKFLEKGDKVKCSI 138
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I +++ RF +L + E + D R++F++L P
Sbjct: 139 RFKGRAITHKEIGQKVLDRFAKACEDLCTIEQRPKMDGRSMFLVLAP 185
>gi|255026967|ref|ZP_05298953.1| translation initiation factor IF-3 [Listeria monocytogenes FSL
J2-003]
Length = 167
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+EQQKK K +K M KE+++ ID+HD+ +L+ ARKFL+ GDKVK +
Sbjct: 59 GKFRFEQQKKDKEARKNQKVIVM--KEVRLSPTIDEHDFDTKLRNARKFLEKGDKVKCSI 116
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I +++ RF +L + E + D R++F++L P
Sbjct: 117 RFKGRAITHKEIGQKVLDRFAKACEDLCTIEQRPKMDGRSMFLVLAP 163
>gi|254510306|ref|ZP_05122373.1| translation initiation factor IF-3 [Rhodobacteraceae bacterium
KLH11]
gi|346992513|ref|ZP_08860585.1| translation initiation factor 3 [Ruegeria sp. TW15]
gi|221534017|gb|EEE37005.1| translation initiation factor IF-3 [Rhodobacteraceae bacterium
KLH11]
Length = 137
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
K++YEQQK++ +KK +++KE+K N D HDY V+++ KFL++GDKVKV
Sbjct: 28 FGKFKYEQQKRESEARKKQKI--IEVKEVKFRPNTDTHDYDVKMRNVFKFLENGDKVKVT 85
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVP 114
+ +GRE +N+ EL+ R DV +L EN R + +++ P
Sbjct: 86 LRFRGREMAHQNLGRELLERVAEDVKDLGKIENMPKMEGRQMIMMIGP 133
>gi|323137355|ref|ZP_08072433.1| translation initiation factor IF-3 [Methylocystis sp. ATCC 49242]
gi|322397342|gb|EFX99865.1| translation initiation factor IF-3 [Methylocystis sp. ATCC 49242]
Length = 175
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
++R+ +QKK +KK +++KE+K+ ID+HDY V++KA R+F ++GDKVKV +
Sbjct: 70 GRFRFAEQKKAAEARKKQKV--VEVKEIKLRPGIDEHDYDVKMKAVRRFFEEGDKVKVTL 127
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEE-NKNFRDRNIFIILVP 114
+GRE ++I L+ R + + LA E + R + ++L P
Sbjct: 128 RFRGREIAHQDIGYRLLTRVKAETANLAKVELEPSMEGRQMVMVLAP 174
>gi|260433905|ref|ZP_05787876.1| translation initiation factor IF-3 [Silicibacter lacuscaerulensis
ITI-1157]
gi|260417733|gb|EEX10992.1| translation initiation factor IF-3 [Silicibacter lacuscaerulensis
ITI-1157]
Length = 144
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YE QK++ +KK +++KE+K N D HDY V+++ KFL+ GDKVKV +
Sbjct: 36 GKYKYETQKREAEARKKQKI--IEVKEVKFRPNTDTHDYEVKMRNVVKFLEKGDKVKVTL 93
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVP 114
+GRE +N+ EL++R DV E+ EN R + +++ P
Sbjct: 94 RFRGREMAHQNLGRELLQRVAEDVKEIGKIENMPKMEGRQMIMMIGP 140
>gi|404254715|ref|ZP_10958683.1| translation initiation factor IF-3 [Sphingomonas sp. PAMC 26621]
Length = 134
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 61/111 (54%), Gaps = 3/111 (2%)
Query: 5 YFFLSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKV 64
+ + K++YE QKK +K ++KE+KM NID HDY ++K +F+ +GDKV
Sbjct: 25 FLDVGKFKYEAQKKANLARKSQKTQ--EIKEIKMRPNIDDHDYDTKMKKVLEFIDEGDKV 82
Query: 65 KVIVNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
K+ + +GRE + + L++R Q DV E A E R + ++L P
Sbjct: 83 KITLRFRGRELSHGQLGMALLQRVQADVTETAKVEAYPRMEGRQMLMVLAP 133
>gi|386054038|ref|YP_005971596.1| translation initiation factor IF-3 [Listeria monocytogenes Finland
1998]
gi|346646689|gb|AEO39314.1| translation initiation factor IF-3 [Listeria monocytogenes Finland
1998]
Length = 167
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+EQQKK K +K M KE+++ ID+HD+ +L+ ARKFL+ GDKVK +
Sbjct: 59 GKFRFEQQKKDKEARKNQKVIVM--KEVRLSPTIDEHDFDTKLRNARKFLEKGDKVKCSI 116
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I +++ RF +L + E + D R++F++L P
Sbjct: 117 RFKGRAITHKEIGQKVLDRFAKACEDLCTIEQRPKMDGRSMFLVLAP 163
>gi|163851051|ref|YP_001639094.1| translation initiation factor IF-3 [Methylobacterium extorquens
PA1]
gi|163662656|gb|ABY30023.1| translation initiation factor IF-3 [Methylobacterium extorquens
PA1]
Length = 176
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 68/107 (63%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
++R+ +QKK+ +K+ +++KE+K+ ID+HDY V++KA ++F ++GDKVKV +
Sbjct: 71 GRFRFNEQKKQNEARKRQKT--VEVKEIKLRPGIDKHDYEVKMKAVQRFFEEGDKVKVTL 128
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKN-FRDRNIFIILVP 114
+GRE ++I + L+ R + + E+A E++ R + +IL P
Sbjct: 129 RFRGREIAHQDIGLRLLERVKQETQEIAKVESEPMLEGRQMIMILAP 175
>gi|403747268|ref|ZP_10955308.1| translation initiation factor IF-3 [Alicyclobacillus hesperidum
URH17-3-68]
gi|403120187|gb|EJY54594.1| translation initiation factor IF-3 [Alicyclobacillus hesperidum
URH17-3-68]
Length = 157
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YEQ KK+K +K + LKE++M NID+HD +V+LK KFLK+G KVKV V
Sbjct: 48 GKFKYEQSKKEKESRKNQKV--VLLKEVRMTPNIDEHDLNVKLKNVIKFLKEGSKVKVSV 105
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILVP 114
+GRE +N+ EL+ R E A E R++ +IL P
Sbjct: 106 RFRGREITHQNLGQELLLRLAKSAEEQAIVERMPKLEGRHMVMILAP 152
>gi|299117169|emb|CBN75133.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 288
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 63/105 (60%), Gaps = 2/105 (1%)
Query: 10 KYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVN 69
K++Y++ ++KK + K A M KE+KM Y I+ HDY VRL+ A+KF+K G +V+++V
Sbjct: 182 KFKYKRDRRKKDNKAKHKATEM--KEVKMSYKIETHDYMVRLRNAQKFVKQGHRVRIVVT 239
Query: 70 LKGRENEFRNIAIELIRRFQNDVGELASEENKNFRDRNIFIILVP 114
+GRE ++ L+ + ND+ LA E K + +I+ P
Sbjct: 240 FRGREQSHMDLGNVLLDKVTNDLEGLALVEPKRREGNRLSMIVFP 284
>gi|254292437|ref|YP_003058460.1| translation initiation factor IF-3 [Hirschia baltica ATCC 49814]
gi|254040968|gb|ACT57763.1| translation initiation factor IF-3 [Hirschia baltica ATCC 49814]
Length = 179
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 32 DLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQND 91
DLKE+KM NID HDY V+ KA +F DGDKVKV + +GRE + + +EL++R + D
Sbjct: 95 DLKEIKMRPNIDTHDYEVKKKAMTRFFDDGDKVKVTLRFRGREMAHQQLGMELLQRVKED 154
Query: 92 VGELAS-EENKNFRDRNIFIILVP 114
E++ E R + ++L P
Sbjct: 155 FAEISKVETEPKLEGRQMTMVLSP 178
>gi|395491854|ref|ZP_10423433.1| translation initiation factor IF-3 [Sphingomonas sp. PAMC 26617]
Length = 134
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 61/111 (54%), Gaps = 3/111 (2%)
Query: 5 YFFLSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKV 64
+ + K++YE QKK +K ++KE+KM NID HDY ++K +F+ +GDKV
Sbjct: 25 FLDVGKFKYEAQKKANLARKSQKTQ--EIKEIKMRPNIDDHDYDTKMKKVLEFIDEGDKV 82
Query: 65 KVIVNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
K+ + +GRE + + L++R Q DV E A E R + ++L P
Sbjct: 83 KITLRFRGRELSHGQLGMALLQRVQADVTETAKVEAYPRMEGRQMLMVLAP 133
>gi|336114626|ref|YP_004569393.1| translation initiation factor IF-3 [Bacillus coagulans 2-6]
gi|335368056|gb|AEH54007.1| translation initiation factor IF-3 [Bacillus coagulans 2-6]
Length = 168
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYR+E QKK + +KK +++KE+++ I++HD++ +L+ A KFL+ GDKVK +
Sbjct: 59 GKYRFEMQKKDREARKKQKI--INVKEVRLSPTIEEHDFNTKLRNAIKFLEKGDKVKASI 116
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I ++ RF E+A+ E+K D R++F++L P
Sbjct: 117 RFKGRAITHKEIGQRVLDRFAEACAEVATVESKPKMDGRSMFLVLTP 163
>gi|118593811|ref|ZP_01551177.1| translation initiation factor IF-3 [Stappia aggregata IAM 12614]
gi|118433606|gb|EAV40271.1| translation initiation factor IF-3 [Stappia aggregata IAM 12614]
Length = 152
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
+Y+Y+ QKK +KK +++KE+KM NID HDY V++K+ +F +GDKVKV +
Sbjct: 46 GRYKYQAQKKAAETRKKQKT--VEIKEIKMRPNIDTHDYEVKMKSMLRFFGEGDKVKVTL 103
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNK 116
+GRE +++ + L+ + + + E+A E R + ++L P K
Sbjct: 104 RFRGREMAHQDLGMNLLNKVREETNEIAKVESAPKLEGRQMVMVLAPIK 152
>gi|114328277|ref|YP_745434.1| protein translation initiation factor 3 [Granulibacter bethesdensis
CGDNIH1]
gi|114316451|gb|ABI62511.1| bacterial Protein Translation Initiation Factor 3 (IF-3)
[Granulibacter bethesdensis CGDNIH1]
Length = 173
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 67/107 (62%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YEQQKKK +K+ +++KE+K+ NID++DY V+++A R F+ +GDKVKV +
Sbjct: 68 GKFKYEQQKKKNEARKRQKV--IEIKEIKVRPNIDENDYQVKMRAMRSFISEGDKVKVTL 125
Query: 69 NLKGRENEFRNIAIELIRRFQNDV-GELASEENKNFRDRNIFIILVP 114
+GRE + + +++R + ++ E E+ +R + ++L P
Sbjct: 126 RFRGREMAHQELGARVLQRIREELDAETKVEQMPKMENRQMVMVLAP 172
>gi|14194834|sp|Q9K867.3|IF3_BACHD RecName: Full=Translation initiation factor IF-3
Length = 171
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYRYEQQKK K +KK +++KE+++ I+ HD++ +L+ ARKFL GDKVK +
Sbjct: 63 GKYRYEQQKKDKEARKKQKT--INVKEVRLSPTIEDHDFNTKLRNARKFLSKGDKVKAAI 120
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVP 114
+GR I ++ R + ++A E K R++F++L P
Sbjct: 121 RFRGRAITHSEIGRNVLERLAKECEDIAIVEAKPKMEGRSMFLVLAP 167
>gi|15615702|ref|NP_244006.1| translation initiation factor IF-3 [Bacillus halodurans C-125]
gi|10175762|dbj|BAB06859.1| translation initiation factor IF-3 [Bacillus halodurans C-125]
Length = 190
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYRYEQQKK K +KK +++KE+++ I+ HD++ +L+ ARKFL GDKVK +
Sbjct: 82 GKYRYEQQKKDKEARKKQKT--INVKEVRLSPTIEDHDFNTKLRNARKFLSKGDKVKAAI 139
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVP 114
+GR I ++ R + ++A E K R++F++L P
Sbjct: 140 RFRGRAITHSEIGRNVLERLAKECEDIAIVEAKPKMEGRSMFLVLAP 186
>gi|304404966|ref|ZP_07386626.1| translation initiation factor IF-3 [Paenibacillus curdlanolyticus
YK9]
gi|304345845|gb|EFM11679.1| translation initiation factor IF-3 [Paenibacillus curdlanolyticus
YK9]
Length = 135
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+RYEQQKK+K +K +DLKE+ NI+++DY +L+ KFLK+GDKVK V
Sbjct: 27 GKFRYEQQKKEKEARKNQKI--VDLKEVWFRSNIEENDYQTKLRNVVKFLKEGDKVKCSV 84
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVP 114
+GRE I ++ R +V EL S E R++ +IL P
Sbjct: 85 RYRGREIAHAAIGQRILDRLSKEVAELCSVERVPKLEGRSMIMILAP 131
>gi|220930018|ref|YP_002506927.1| translation initiation factor IF-3 [Clostridium cellulolyticum H10]
gi|220000346|gb|ACL76947.1| translation initiation factor IF-3 [Clostridium cellulolyticum H10]
Length = 176
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Query: 31 MDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQN 90
+ +KE+++ I++HD+ V++K A KFLKDGDKVKV + +GRE ++ + E++ +F N
Sbjct: 89 VSIKEVRLSAKIEEHDFDVKVKNAYKFLKDGDKVKVSIRFRGREMKYTSDGKEVLEKFAN 148
Query: 91 DVGELA-SEENKNFRDRNIFIILVPNK 116
V E+ +E R++ IIL PNK
Sbjct: 149 AVSEVGVAERQPKLEGRSMMIILSPNK 175
>gi|393722128|ref|ZP_10342055.1| translation initiation factor IF-3 [Sphingomonas sp. PAMC 26605]
Length = 134
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 61/111 (54%), Gaps = 3/111 (2%)
Query: 5 YFFLSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKV 64
+ + K++YE QKK +K ++KE+KM NID HDY ++K +F+ +GDKV
Sbjct: 25 FLDVGKFKYEAQKKANLARKSQKTQ--EIKEIKMRPNIDDHDYDTKMKKVLEFIDEGDKV 82
Query: 65 KVIVNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
K+ + +GRE + + L++R Q DV E A E R + ++L P
Sbjct: 83 KITLRFRGRELSHGQLGMVLLQRVQADVAETAKVEAYPRMEGRQMLMVLAP 133
>gi|260426749|ref|ZP_05780728.1| translation initiation factor IF-3 [Citreicella sp. SE45]
gi|260421241|gb|EEX14492.1| translation initiation factor IF-3 [Citreicella sp. SE45]
Length = 235
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YEQQK++ +KK +++KE+K D HDY V+++ KFL++GDKVK+ +
Sbjct: 128 GKFKYEQQKRESEARKKQKI--IEVKEIKFRPGTDTHDYDVKMRNVLKFLENGDKVKITL 185
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVP 114
+GRE +N+ EL+ R DV EL EN R + +++ P
Sbjct: 186 RFRGREMAHQNLGRELLERVAEDVKELGKVENMPKMEGRQMIMMIGP 232
>gi|406574220|ref|ZP_11049954.1| translation initiation factor 3 (bIF-3) [Janibacter hoylei PVAS-1]
gi|404556359|gb|EKA61827.1| translation initiation factor 3 (bIF-3) [Janibacter hoylei PVAS-1]
Length = 191
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 3/125 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YE K + + +K+ N + +KE+K+ ID HDY + +FL GDKVKV +
Sbjct: 46 GKYKYEAAMKAR-EARKNQVNTV-IKEIKLRPKIDSHDYGTKKGHVERFLGAGDKVKVTI 103
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNKALLQKAQEPPK 127
+GRE + L++R DV EL + E+ +D RN+ ++L P K + E +
Sbjct: 104 MFRGREQSRPELGFRLLQRLAEDVVELGTVESAPKQDGRNMIMVLAPTKRKSEARAEARR 163
Query: 128 KKDKQ 132
KKD+Q
Sbjct: 164 KKDEQ 168
>gi|402771166|ref|YP_006590703.1| translation initiation factor IF-3 [Methylocystis sp. SC2]
gi|401773186|emb|CCJ06052.1| Translation initiation factor IF-3 [Methylocystis sp. SC2]
Length = 175
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
++R+ +QKK +KK +++KE+K+ ID HDY V++KA R+F ++GDKVKV +
Sbjct: 70 GRFRFAEQKKAAEARKKQKV--VEVKEIKLRPGIDDHDYGVKMKAVRRFFEEGDKVKVTL 127
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEE-NKNFRDRNIFIILVP 114
+GRE ++I L+ R + + LA E + R + ++L P
Sbjct: 128 RFRGREIAHQDIGYRLLSRVKAETATLAKVELEPSMEGRQMVMVLAP 174
>gi|50955434|ref|YP_062722.1| translation initiation factor IF-3 [Leifsonia xyli subsp. xyli str.
CTCB07]
gi|50951916|gb|AAT89617.1| translation initiation factor IF-3 [Leifsonia xyli subsp. xyli str.
CTCB07]
Length = 268
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE +K K + +++ AN + LKE++ ID+HDY + K A FL+ GDKVK ++
Sbjct: 111 GKFKYEAAQKAK-EARRNQANTI-LKEVRFRLKIDKHDYETKRKRAEGFLQAGDKVKAMI 168
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE + L++RF DV EL + E N RN+ +I+ P
Sbjct: 169 LFRGREQSRPEQGVRLLQRFAEDVAELGTVESNPTIDGRNMVMIISP 215
>gi|402819916|ref|ZP_10869483.1| hypothetical protein IMCC14465_07170 [alpha proteobacterium
IMCC14465]
gi|402510659|gb|EJW20921.1| hypothetical protein IMCC14465_07170 [alpha proteobacterium
IMCC14465]
Length = 159
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K +Y+ QKK +KK +D+KE+KM NID HDY V++++ KFL GDKVKV +
Sbjct: 54 GKLKYQNQKKASEARKKQKT--VDIKEIKMRPNIDTHDYDVKMRSVMKFLSAGDKVKVTM 111
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE + +E++ R ++ E A E R + ++L P
Sbjct: 112 RFRGREMMHHELGMEVLHRVRDHFEEEAKVEAAPKMEGRQMIMVLAP 158
>gi|420157195|ref|ZP_14664035.1| translation initiation factor IF-3 [Clostridium sp. MSTE9]
gi|394757205|gb|EJF40264.1| translation initiation factor IF-3 [Clostridium sp. MSTE9]
Length = 143
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+EQ K+ K +K + +D+KE+++ NID HD++ ++ A +FL+DGDKVKV +
Sbjct: 35 GKFRFEQAKRDKEARKNQ--HVVDIKEIRLSLNIDTHDFNTKVGHATRFLQDGDKVKVSI 92
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE +++++F E+A+ E+ RN+ + L P
Sbjct: 93 RFRGREMGHPEQGHQIMQKFAQACSEIANVEKPSKLEGRNMLMFLAP 139
>gi|428182647|gb|EKX51507.1| hypothetical protein GUITHDRAFT_57187, partial [Guillardia theta
CCMP2712]
Length = 176
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 10 KYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVN 69
K RYE +K++K ++K S +LKE+K+ Y ID HDY VR +A KFL GDKVK +
Sbjct: 69 KLRYENEKREKMKKKNS--KNAELKEVKLSYKIDVHDYEVRKRATIKFLTKGDKVKASIR 126
Query: 70 LKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGRE + +A R D E ++ E K + R + +IL P
Sbjct: 127 FKGREVAHQRLAESTFARLMEDTKEFSTVEKKPMMEGRQMQMILCP 172
>gi|188580866|ref|YP_001924311.1| translation initiation factor IF-3 [Methylobacterium populi BJ001]
gi|259491508|sp|B1ZGB8.1|IF3_METPB RecName: Full=Translation initiation factor IF-3
gi|179344364|gb|ACB79776.1| translation initiation factor IF-3 [Methylobacterium populi BJ001]
Length = 173
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 68/107 (63%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
++R+ +QKK+ +K+ +++KE+K+ ID+HDY V++KA ++F ++GDKVKV +
Sbjct: 68 GRFRFNEQKKQNEARKRQKT--VEVKEIKLRPGIDKHDYDVKMKAVQRFFEEGDKVKVTL 125
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKN-FRDRNIFIILVP 114
+GRE ++I + L+ R + + E+A E++ R + +IL P
Sbjct: 126 RFRGREIAHQDIGLRLLERVKQETQEVAKVESEPMLEGRQMIMILAP 172
>gi|381166427|ref|ZP_09875642.1| Translation initiation factor IF-3 [Phaeospirillum molischianum DSM
120]
gi|380684469|emb|CCG40454.1| Translation initiation factor IF-3 [Phaeospirillum molischianum DSM
120]
Length = 173
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 69/107 (64%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE QKKK +KK +++KE+K+ NID++DY V++++ +KFL +GDKVKV +
Sbjct: 68 GKFKYEAQKKKNEARKKQKV--IEVKEIKLRPNIDENDYGVKMRSMKKFLDEGDKVKVTM 125
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE ++I ++L+ + ++D+ L E+ R + +++ P
Sbjct: 126 RFRGRELAHQDIGMKLLEQVRDDLEALGKVEQVPKMEGRQMVMVIAP 172
>gi|182679072|ref|YP_001833218.1| translation initiation factor IF-3 [Beijerinckia indica subsp.
indica ATCC 9039]
gi|182634955|gb|ACB95729.1| translation initiation factor IF-3 [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 219
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+ +QKK +KK +++KE+K+ ID+HDY ++KA ++F ++GDKVKV +
Sbjct: 113 GKFRFLEQKKAAEARKKQKI--VEIKEIKLRPGIDEHDYDTKMKAVKRFFEEGDKVKVTL 170
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE +++ L+ R +++ G A E + R + ++L P
Sbjct: 171 RFRGREMAHQDLGFRLLERVKSETGTFAKVEAEPSMEGRQMIMVLAP 217
>gi|402298409|ref|ZP_10818104.1| translation initiation factor IF-3 [Bacillus alcalophilus ATCC
27647]
gi|401726382|gb|EJS99614.1| translation initiation factor IF-3 [Bacillus alcalophilus ATCC
27647]
Length = 167
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+RYEQQKK K +KK +++KE+++ I+ HD++ +L+ ARKFL+ GDKVK +
Sbjct: 59 GKFRYEQQKKDKEARKKQKV--INVKEVRLSPTIEDHDFNTKLRNARKFLEKGDKVKAAI 116
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVP 114
+GR I ++ R + ++A E+K R++F+IL P
Sbjct: 117 RFRGRAITHSQIGKVVLERLAKECEDIAVVESKPKMEGRSMFLILAP 163
>gi|328541818|ref|YP_004301927.1| translation initiation factor IF-3 [Polymorphum gilvum SL003B-26A1]
gi|326411570|gb|ADZ68633.1| Predicted translation initiation factor IF-3 [Polymorphum gilvum
SL003B-26A1]
Length = 132
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
+++Y+ QKK +KK +++KE+KM NID HDY V++K+ +F +GDKVKV +
Sbjct: 25 GRFKYQSQKKAAEARKKQKT--VEIKEIKMRPNIDIHDYEVKMKSMLRFFSEGDKVKVTL 82
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE +++ ++L+ + +++ E+A E R + ++L P
Sbjct: 83 RFRGREMAHQDLGMKLLMKVRDETAEIAKVESAPRLEGRQMVMVLAP 129
>gi|220924608|ref|YP_002499910.1| translation initiation factor IF-3 [Methylobacterium nodulans ORS
2060]
gi|219949215|gb|ACL59607.1| translation initiation factor IF-3 [Methylobacterium nodulans ORS
2060]
Length = 176
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
+YR+ +QKK+ +K+ +++KE+K+ ID+HDY V++KA ++F ++GDKVKV +
Sbjct: 71 GRYRFNEQKKQAEARKRQKT--VEVKEIKLRPGIDKHDYDVKMKAVQRFFEEGDKVKVTL 128
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE +++ + L+ R + + ++A E R + +IL P
Sbjct: 129 RFRGREMAHQDLGLRLLERVKAETQDVAKVESEPQLEGRQMIMILAP 175
>gi|357974743|ref|ZP_09138714.1| translation initiation factor IF-3 [Sphingomonas sp. KC8]
Length = 134
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 64/111 (57%), Gaps = 3/111 (2%)
Query: 5 YFFLSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKV 64
+ + K++YE QKK +K ++KE+KM NID HDY ++K +F+ +GDKV
Sbjct: 25 FLDVGKFKYEAQKKANLARKTQKTQ--EIKEIKMRPNIDDHDYDTKMKKIFEFIGEGDKV 82
Query: 65 KVIVNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
KV + +GRE + +++++R Q DV E+A E+ R + +++ P
Sbjct: 83 KVTLRFRGRELAHGQLGMQVLQRVQADVAEIAKVEQFPRMEGRQMLMVIAP 133
>gi|365920007|ref|ZP_09444362.1| translation initiation factor IF-3 [Cardiobacterium valvarum F0432]
gi|364578605|gb|EHM55804.1| translation initiation factor IF-3 [Cardiobacterium valvarum F0432]
Length = 110
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+EQQKK+ Q+ + R+ +KE+K D+ DY V+L+ +FL DGDK KV V
Sbjct: 4 GKFRFEQQKKQ--QEARKNQKRIQVKEIKFRPGTDEGDYQVKLRNLNRFLTDGDKAKVTV 61
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVPNK 116
+GRE + + EL+ R + D+ E+ E K R + ++ P K
Sbjct: 62 RFRGREMAHQGLGQELLTRIEADLAEVGIVEQKAGMEGRQMVMVFAPKK 110
>gi|257867128|ref|ZP_05646781.1| translation initiation factor IF-3 [Enterococcus casseliflavus
EC30]
gi|257873462|ref|ZP_05653115.1| translation initiation factor IF-3 [Enterococcus casseliflavus
EC10]
gi|257877206|ref|ZP_05656859.1| translation initiation factor IF-3 [Enterococcus casseliflavus
EC20]
gi|325568471|ref|ZP_08144838.1| translation initiation factor IF3 [Enterococcus casseliflavus ATCC
12755]
gi|420263070|ref|ZP_14765710.1| translation initiation factor IF-3 [Enterococcus sp. C1]
gi|257801184|gb|EEV30114.1| translation initiation factor IF-3 [Enterococcus casseliflavus
EC30]
gi|257807626|gb|EEV36448.1| translation initiation factor IF-3 [Enterococcus casseliflavus
EC10]
gi|257811372|gb|EEV40192.1| translation initiation factor IF-3 [Enterococcus casseliflavus
EC20]
gi|325158240|gb|EGC70393.1| translation initiation factor IF3 [Enterococcus casseliflavus ATCC
12755]
gi|394770034|gb|EJF49852.1| translation initiation factor IF-3 [Enterococcus sp. C1]
Length = 173
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 67/107 (62%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+EQQKK + +KK +++KE+++ ID +D++ +L+ ARKFL+ GDKVK +
Sbjct: 65 GKFRFEQQKKDREARKKQKV--INIKEVRLSPTIDVNDFNTKLRNARKFLEKGDKVKASI 122
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I +++ R + +LA+ E K D R++F++L P
Sbjct: 123 RFKGRAITHKEIGQKVLDRLAEETADLATVEQKPKMDGRSMFLVLAP 169
>gi|366089352|ref|ZP_09455825.1| translation initiation factor IF-3 [Lactobacillus acidipiscis KCTC
13900]
Length = 154
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 69/107 (64%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYR+E QKK++ +KK +++KE+++ ID +D++ ++K ARKFL GDKVKV +
Sbjct: 46 GKYRFELQKKQREARKKQKV--INIKEVRLSPTIDTNDFNTKVKNARKFLGKGDKVKVSI 103
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
+GR ++I E++ F + ++AS ++K D R++F++L P
Sbjct: 104 RFRGRAITHKDIGREVLNNFAKETEDIASVQSKPKMDGRSMFLMLAP 150
>gi|125973740|ref|YP_001037650.1| translation initiation factor 3 [Clostridium thermocellum ATCC
27405]
gi|256005542|ref|ZP_05430503.1| translation initiation factor IF-3 [Clostridium thermocellum DSM
2360]
gi|125713965|gb|ABN52457.1| translation initiation factor IF-3 [Clostridium thermocellum ATCC
27405]
gi|255990522|gb|EEU00643.1| translation initiation factor IF-3 [Clostridium thermocellum DSM
2360]
Length = 164
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 68/107 (63%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY +E KK+K +K +++KE+++ +I++HD++ +LK A +FLKDGDKVKV V
Sbjct: 58 GKYMFELAKKEKEARKNQKV--INVKEVRLSASIEEHDFNFKLKNALRFLKDGDKVKVSV 115
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVP 114
+GRE + ++ +++ +F V ++A E K RN+F+IL P
Sbjct: 116 KFRGREMNYTSLGQQVLEKFAEAVKDVAVVEKKPKLEGRNMFMILNP 162
>gi|421858805|ref|ZP_16291059.1| translation initiation factor 3 [Paenibacillus popilliae ATCC
14706]
gi|410831658|dbj|GAC41496.1| translation initiation factor 3 [Paenibacillus popilliae ATCC
14706]
Length = 165
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+RYEQQKK+K +K +DLKE+ NID+HD+ +L+ KFL++GDKVK V
Sbjct: 58 GKFRYEQQKKEKEARKNQKT--VDLKEVWFRANIDEHDFQTKLRNVLKFLREGDKVKCSV 115
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVP 114
+GRE +I +++ R + EL + E R++ +IL P
Sbjct: 116 RFRGREIAHSDIGKKVLDRVLVEANELCTVERLPKLEGRSMIMILAP 162
>gi|217976828|ref|YP_002360975.1| translation initiation factor IF-3 [Methylocella silvestris BL2]
gi|217502204|gb|ACK49613.1| translation initiation factor IF-3 [Methylocella silvestris BL2]
Length = 175
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+ +QKK +KK +++KE+K+ ID+HDY ++KA R+F ++GDKVKV +
Sbjct: 70 GKFRFLEQKKSAEARKKQKI--VEIKEIKLRPGIDEHDYDTKMKAVRRFFEEGDKVKVTL 127
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE +++ L+ R +N+ +A E + R + ++L P
Sbjct: 128 RFRGREMAHQDLGFRLLERVKNETVTIAKVEAEPSMEGRQMVMVLAP 174
>gi|334341013|ref|YP_004545993.1| translation initiation factor IF-3 [Desulfotomaculum ruminis DSM
2154]
gi|334092367|gb|AEG60707.1| translation initiation factor IF-3 [Desulfotomaculum ruminis DSM
2154]
Length = 156
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YEQ K++K +KK + +KE+K+ I+ HDY V+ K A +FLKDGDKVKV +
Sbjct: 46 GKFKYEQSKREKEAKKKQRI--IQVKEVKLRPRIEDHDYQVKAKNAERFLKDGDKVKVTI 103
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE + +L+ R D+ +L + E +N+ +IL P
Sbjct: 104 MFRGREIVHTQLGHKLLIRLAEDLKDLCTVERQPKLEGKNMIMILAP 150
>gi|281417896|ref|ZP_06248916.1| translation initiation factor IF-3 [Clostridium thermocellum JW20]
gi|385778386|ref|YP_005687551.1| translation initiation factor IF-3 [Clostridium thermocellum DSM
1313]
gi|419721306|ref|ZP_14248471.1| Translation initiation factor IF-3 [Clostridium thermocellum AD2]
gi|419724382|ref|ZP_14251448.1| Translation initiation factor IF-3 [Clostridium thermocellum YS]
gi|281409298|gb|EFB39556.1| translation initiation factor IF-3 [Clostridium thermocellum JW20]
gi|316940066|gb|ADU74100.1| translation initiation factor IF-3 [Clostridium thermocellum DSM
1313]
gi|380772204|gb|EIC06058.1| Translation initiation factor IF-3 [Clostridium thermocellum YS]
gi|380782686|gb|EIC12319.1| Translation initiation factor IF-3 [Clostridium thermocellum AD2]
Length = 173
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 68/107 (63%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY +E KK+K +K +++KE+++ +I++HD++ +LK A +FLKDGDKVKV V
Sbjct: 67 GKYMFELAKKEKEARKNQKV--INVKEVRLSASIEEHDFNFKLKNALRFLKDGDKVKVSV 124
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVP 114
+GRE + ++ +++ +F V ++A E K RN+F+IL P
Sbjct: 125 KFRGREMNYTSLGQQVLEKFAEAVKDVAVVEKKPKLEGRNMFMILNP 171
>gi|365873903|ref|ZP_09413436.1| translation initiation factor IF-3 [Thermanaerovibrio velox DSM
12556]
gi|363983990|gb|EHM10197.1| translation initiation factor IF-3 [Thermanaerovibrio velox DSM
12556]
Length = 275
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYR++QQK+ K +KK + LKE+KM ID HDYS +++A R FL+DG +VKV V
Sbjct: 136 GKYRFQQQKRDKDARKKQKSQA--LKEIKMRPKIDVHDYSFKVRAVRDFLEDGHRVKVSV 193
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEE 99
+GRE F + E++ R + DV +L E
Sbjct: 194 FFRGREMAFLDKGREVLDRVRKDVADLGKVE 224
>gi|288801329|ref|ZP_06406783.1| translation initiation factor IF-3 [Prevotella sp. oral taxon 299
str. F0039]
gi|288331712|gb|EFC70196.1| translation initiation factor IF-3 [Prevotella sp. oral taxon 299
str. F0039]
Length = 199
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 73/118 (61%), Gaps = 4/118 (3%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SK+ Y+Q+K +K ++K A ++D+KE++ G D+HDY +LK A++FL G+KV+ V
Sbjct: 35 SKFLYQQKKHQKEMKQKQA--KVDIKEIRFGPQTDEHDYQFKLKHAKEFLNGGNKVRAYV 92
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKA-LLQKAQE 124
+GR F+ L+ RF ND+ E A E+ + +F+ L P KA +++K+Q+
Sbjct: 93 FFRGRSILFKEQGEVLLLRFANDLEEYAKVEQLPKLDGKKMFLYLTPKKAGVVKKSQQ 150
>gi|414153041|ref|ZP_11409368.1| Translation initiation factor IF-3 [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
gi|411455423|emb|CCO07270.1| Translation initiation factor IF-3 [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
Length = 156
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YEQ K++K +KK + +KE+K+ I++HDY V+ K A +FLKDGDKVKV +
Sbjct: 46 GKFKYEQSKREKEAKKKQRI--IQVKEVKLRPRIEEHDYIVKAKNAERFLKDGDKVKVTI 103
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILVP 114
+GRE + +L+ R D+ EL E +N+ +IL P
Sbjct: 104 MFRGREIVHTELGKKLLDRLAEDLKELCLVERQAKLEGKNMIMILAP 150
>gi|402490716|ref|ZP_10837505.1| translation initiation factor IF-3 [Rhizobium sp. CCGE 510]
gi|401810742|gb|EJT03115.1| translation initiation factor IF-3 [Rhizobium sp. CCGE 510]
Length = 134
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y QKK +KK +++KE+KM NID HDY V++KA +F +GDKVKV
Sbjct: 28 LGKLKYANQKKAAEARKKQKI--VEVKEIKMRPNIDTHDYEVKMKAMGRFFDEGDKVKVT 85
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE + + ++L+++ + D E A E R + ++L P
Sbjct: 86 LKFRGREMAHQELGMKLLQQVKADTIEFAKVEAEPKLEGRQMMMVLAP 133
>gi|393721064|ref|ZP_10340991.1| translation initiation factor IF-3 [Sphingomonas echinoides ATCC
14820]
Length = 134
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 61/111 (54%), Gaps = 3/111 (2%)
Query: 5 YFFLSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKV 64
+ + K++YE QKK +K ++KE+KM NID HDY ++K +F+ +GDKV
Sbjct: 25 FLDVGKFKYEAQKKANLARKSQKTQ--EIKEIKMRPNIDDHDYDTKMKKVLEFIDEGDKV 82
Query: 65 KVIVNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
K+ + +GRE + + L++R Q DV E A E R + ++L P
Sbjct: 83 KITLRFRGRELSHGQLGMILLQRVQADVAETAKVEAYPRMEGRQMLMVLAP 133
>gi|398355918|ref|YP_006401382.1| translation initiation factor IF-3 [Sinorhizobium fredii USDA 257]
gi|390131244|gb|AFL54625.1| translation initiation factor IF-3 [Sinorhizobium fredii USDA 257]
Length = 191
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y QKK +KK +++KE+KM NID HDY V++KA +F ++GDKVKV
Sbjct: 85 LGKLKYANQKKAAEARKKQKI--VEIKEIKMRPNIDTHDYEVKMKAMNRFFEEGDKVKVT 142
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE + + ++L+ + ++D +A E R + ++L P
Sbjct: 143 LKFRGREMAHQELGMKLLLQVKDDTQAIAKVEAEPKLEGRQMMMVLAP 190
>gi|345302491|ref|YP_004824393.1| translation initiation factor IF-3 [Rhodothermus marinus
SG0.5JP17-172]
gi|345111724|gb|AEN72556.1| Translation initiation factor IF-3 [Rhodothermus marinus
SG0.5JP17-172]
Length = 180
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 67/109 (61%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+RYEQQKK+K ++K A + +KE++ + D HD+ + + AR+FL+DG KVK V
Sbjct: 72 GKFRYEQQKKEKEARRKQLAQQ--IKEIRFRPHTDTHDFEFKTRHARQFLEDGHKVKAWV 129
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNK 116
+GR+ +++ ++L+RRF + ++A ++ R + +IL P K
Sbjct: 130 QFRGRDIIYQDAGLDLLRRFIEALQDIAKIDQPPKMEGRRMTVILSPTK 178
>gi|408356313|ref|YP_006844844.1| translation initiation factor IF-3 [Amphibacillus xylanus NBRC
15112]
gi|407727084|dbj|BAM47082.1| translation initiation factor IF-3 [Amphibacillus xylanus NBRC
15112]
Length = 173
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 67/108 (62%), Gaps = 3/108 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYR+EQQKK + +KK +++KE+++ I+ HD++ +L+ ARKFL+ GDKVKV +
Sbjct: 65 GKYRFEQQKKDREARKKQKV--INIKEVRLSPGIEDHDFNTKLRNARKFLEKGDKVKVSI 122
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVPN 115
+GR +++ +++ R ++++ E K R++F++L P
Sbjct: 123 RFRGRAITHKDLGRDVLERMAEACNDISTVEQKPKMEGRSMFLMLAPT 170
>gi|410667675|ref|YP_006920046.1| translation initiation factor IF-3 [Thermacetogenium phaeum DSM
12270]
gi|409105422|gb|AFV11547.1| translation initiation factor IF-3 [Thermacetogenium phaeum DSM
12270]
Length = 243
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YEQ K+++ +KK +++KELK+ I++HD+ V++++A++FL DGDKVKV +
Sbjct: 130 GKYKYEQSKRERDARKKQRV--INIKELKIRPGIEEHDFQVKVRSAQRFLSDGDKVKVTL 187
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILVP 114
+GRE + L RF + + A E+ RN+ +IL P
Sbjct: 188 MFRGREISHAELGHNLCMRFYQQLEKQAIMEKEPRVEGRNMIMILAP 234
>gi|297571534|ref|YP_003697308.1| translation initiation factor IF-3 [Arcanobacterium haemolyticum
DSM 20595]
gi|296931881|gb|ADH92689.1| translation initiation factor IF-3 [Arcanobacterium haemolyticum
DSM 20595]
Length = 202
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE +K + + +++ AN LKE+++G IDQHDY +LK KFL GDKVKV +
Sbjct: 51 GKFKYEAAQKAR-ESRRNQAN-TQLKEMRLGLKIDQHDYETKLKRIIKFLNGGDKVKVQL 108
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + + L+ R D E A E+ D R++ ++L P +
Sbjct: 109 RFRGREQSRPEVGVRLMERLAADTAEDAVVESAPRVDGRSMVMVLAPTR 157
>gi|384136002|ref|YP_005518716.1| translation initiation factor IF-3 [Alicyclobacillus acidocaldarius
subsp. acidocaldarius Tc-4-1]
gi|339290087|gb|AEJ44197.1| translation initiation factor IF-3 [Alicyclobacillus acidocaldarius
subsp. acidocaldarius Tc-4-1]
Length = 157
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YEQ K+++ +K + LKE++M NID+HD +V+LK KFL +G KVKV V
Sbjct: 48 GKFKYEQSKRERESRKHQKV--VLLKEVRMTPNIDEHDLNVKLKNVLKFLSEGSKVKVSV 105
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILVP 114
+GRE +NI EL+ R E A E R++ +IL P
Sbjct: 106 RFRGREITHQNIGQELLERLAKSAEEHAIVERAPKLEGRHMVMILAP 152
>gi|374322930|ref|YP_005076059.1| translation initiation factor IF-3 [Paenibacillus terrae HPL-003]
gi|357201939|gb|AET59836.1| translation initiation factor IF-3 [Paenibacillus terrae HPL-003]
Length = 165
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+RYEQQKK+K +K +D+KE+ NI++HDY + + KFL +GDKVK V
Sbjct: 58 GKFRYEQQKKEKEARKNQKI--VDIKEVWFRSNIEEHDYQTKFRNVVKFLNEGDKVKCSV 115
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE N+ +++ R + +V +L + E R++ +IL P
Sbjct: 116 RFRGREITHANVGQKILERVKVEVADLCTVERQPKLEGRSMIMILAP 162
>gi|408376997|ref|ZP_11174600.1| translation initiation factor IF-3 [Agrobacterium albertimagni
AOL15]
gi|407748956|gb|EKF60469.1| translation initiation factor IF-3 [Agrobacterium albertimagni
AOL15]
Length = 134
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y QKK +KK +++KE+KM NID HDY V++KA +F ++GDKVKV
Sbjct: 28 LGKLKYANQKKAAEARKKQKI--VEVKEIKMRPNIDTHDYEVKMKAMNRFFEEGDKVKVT 85
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE + + ++L+ + + D +A E R + ++L P
Sbjct: 86 LKFRGREMAHQELGMKLLLQVKEDTATIAKVEAEPKLEGRQMMMVLSP 133
>gi|357024820|ref|ZP_09086957.1| translation initiation factor IF-3 [Mesorhizobium amorphae
CCNWGS0123]
gi|355543220|gb|EHH12359.1| translation initiation factor IF-3 [Mesorhizobium amorphae
CCNWGS0123]
Length = 134
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 61/108 (56%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y QKK +K +++KE+KM NID HDY ++KA R+F ++GDKVK+
Sbjct: 28 LGKLKYANQKKAAEARKNQKV--IEIKEIKMRPNIDSHDYETKMKAVRRFFEEGDKVKLT 85
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE + ++L+ + + +V +A E R + ++L P
Sbjct: 86 LRFRGREMAHMELGMQLLNKVREEVAPIAKVEAEPKLEGRQMMMVLAP 133
>gi|357013244|ref|ZP_09078243.1| InfC [Paenibacillus elgii B69]
Length = 166
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+RYE QKK+K +K ++LKE+++ ID+HD+ +L+ KFL DGDKVK+ V
Sbjct: 58 GKFRYETQKKEKEARKNQKI--VELKEIRLSATIDEHDFQTKLRNVVKFLNDGDKVKLSV 115
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILVP 114
+GRE +I ++ R +V EL E R++ +IL P
Sbjct: 116 RFRGREIAHADIGQRVLERMAAEVEELCIVERRPKLEGRSMIMILAP 162
>gi|170749563|ref|YP_001755823.1| translation initiation factor IF-3 [Methylobacterium radiotolerans
JCM 2831]
gi|259491509|sp|B1M6P9.1|IF3_METRJ RecName: Full=Translation initiation factor IF-3
gi|170656085|gb|ACB25140.1| translation initiation factor IF-3 [Methylobacterium radiotolerans
JCM 2831]
Length = 173
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 67/107 (62%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
++R+ +QKK+ +K+ +++KE+K+ ID+HDY ++K+ +F ++GDKVKV +
Sbjct: 68 GRFRFNEQKKQNEARKRQKT--VEVKEIKLRPGIDKHDYDTKMKSVHRFFEEGDKVKVTL 125
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKN-FRDRNIFIILVP 114
+GRE ++I + L+ R +++ E+A E++ R + +IL P
Sbjct: 126 RFRGREMAHQDIGLRLLERVKSETAEIAKVESEPMLEGRQMIMILAP 172
>gi|428312250|ref|YP_007123227.1| translation initiation factor IF-3 [Microcoleus sp. PCC 7113]
gi|428253862|gb|AFZ19821.1| translation initiation factor IF-3 [Microcoleus sp. PCC 7113]
Length = 178
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 64/108 (59%), Gaps = 6/108 (5%)
Query: 10 KYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVN 69
K++Y QQ KK G+ + + LKE+KM YNI +HDY VR+ + +FLK GDKVK +
Sbjct: 72 KWKY-QQSKKIGKARPTV-----LKEVKMSYNIAEHDYQVRVAQSERFLKGGDKVKTTIL 125
Query: 70 LKGRENEFRNIAIELIRRFQNDVGELASEENKNFRDRNIFIILVPNKA 117
LKGRE + ++A +++ D+ E+A E R+ N +L+ K
Sbjct: 126 LKGREIQHIDLAEVRLKQMSVDLQEVADLEQPPKREGNRMTMLLSPKT 173
>gi|406837400|ref|ZP_11096994.1| translation initiation factor IF-3 [Lactobacillus vini DSM 20605]
Length = 168
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 68/108 (62%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
KYR+E QKK++ +KK +++KE+++ ID +D++ + K A+KFL GDKVKV
Sbjct: 57 FGKYRFELQKKQREARKKQKV--INVKEVRLSPTIDVNDFNTKTKNAQKFLSKGDKVKVS 114
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
+ KGR + I +++ RF V ++A+ E++ D R++F++L P
Sbjct: 115 IRFKGRAITHKEIGYDVLNRFAKAVADVATVESRAKMDGRSMFMMLAP 162
>gi|330995386|ref|ZP_08319296.1| translation initiation factor IF-3 [Paraprevotella xylaniphila YIT
11841]
gi|329575881|gb|EGG57405.1| translation initiation factor IF-3 [Paraprevotella xylaniphila YIT
11841]
Length = 214
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 67/119 (56%), Gaps = 3/119 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SK+ Y+Q+K++K + K+ ++D+KE++ G D HDY+ +LK A+ FL DGDKVK V
Sbjct: 67 SKFLYQQKKRQK--EMKAKQVKVDVKEIRFGPQTDDHDYNFKLKHAQGFLSDGDKVKAYV 124
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKALLQKAQEPP 126
KGR F+ L+ RF ND+ E E+ + + I + P K + K Q P
Sbjct: 125 FFKGRSILFKEQGEVLLLRFANDLEEYGKVEQMPVLEGKRMTIFIAPKKQVQAKKQAEP 183
>gi|297182028|gb|ADI18203.1| translation initiation factor 3 (if-3) [uncultured delta
proteobacterium HF0200_39N20]
Length = 144
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 67/109 (61%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++Y+Q K+ ++ + LKE+KM I++HD+ +L+ A +FL+DGDKVKV V
Sbjct: 35 GKFKYQQSKRSHVARQNQKI--IHLKEVKMKPKIEEHDFQFKLRNALRFLEDGDKVKVGV 92
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNK 116
GR+ +++ IEL+ +FQ ++G+ + E+ R++ +IL P K
Sbjct: 93 RFMGRQIAHKDLGIELLEKFQAEIGDGGTVEQPITSEGRSMHMILAPPK 141
>gi|218288922|ref|ZP_03493173.1| translation initiation factor IF-3 [Alicyclobacillus acidocaldarius
LAA1]
gi|258512136|ref|YP_003185570.1| translation initiation factor IF-3 [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|218241011|gb|EED08188.1| translation initiation factor IF-3 [Alicyclobacillus acidocaldarius
LAA1]
gi|257478862|gb|ACV59181.1| translation initiation factor IF-3 [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 154
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YEQ K+++ +K + LKE++M NID+HD +V+LK KFL +G KVKV V
Sbjct: 45 GKFKYEQSKRERESRKHQKV--VLLKEVRMTPNIDEHDLNVKLKNVLKFLSEGSKVKVSV 102
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILVP 114
+GRE +NI EL+ R E A E R++ +IL P
Sbjct: 103 RFRGREITHQNIGQELLERLAKSAEEHAIVERAPKLEGRHMVMILAP 149
>gi|347756904|ref|YP_004864466.1| translation initiation factor IF-3 [Micavibrio aeruginosavorus
ARL-13]
gi|347589422|gb|AEP08464.1| translation initiation factor IF-3 [Micavibrio aeruginosavorus
ARL-13]
Length = 166
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 66/120 (55%), Gaps = 12/120 (10%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YE QKK +KK +++KELK+ I HDY V++KAAR+FL++GDKVK +
Sbjct: 57 GKYKYEMQKKANEARKKQKV--IEIKELKLRPAIGDHDYEVKMKAARRFLEEGDKVKFTL 114
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKALLQKAQEPPK 127
+GRE + + +E++ R + D+ L E R + +++ A E PK
Sbjct: 115 RFRGREMAHQQLGMEVLNRVKEDLSGLGKVEMEPRLEGRQMMMVI---------ASESPK 165
>gi|227550907|ref|ZP_03980956.1| translation initiation factor IF3 [Enterococcus faecium TX1330]
gi|257878889|ref|ZP_05658542.1| translation initiation factor IF-3 [Enterococcus faecium 1,230,933]
gi|257881525|ref|ZP_05661178.1| translation initiation factor IF-3 [Enterococcus faecium 1,231,502]
gi|257885797|ref|ZP_05665450.1| translation initiation factor IF-3 [Enterococcus faecium 1,231,501]
gi|257887844|ref|ZP_05667497.1| translation initiation factor IF-3 [Enterococcus faecium 1,141,733]
gi|257890747|ref|ZP_05670400.1| translation initiation factor IF-3 [Enterococcus faecium 1,231,410]
gi|257893358|ref|ZP_05673011.1| translation initiation factor IF-3 [Enterococcus faecium 1,231,408]
gi|257896538|ref|ZP_05676191.1| translation initiation factor IF-3 [Enterococcus faecium Com12]
gi|257899519|ref|ZP_05679172.1| translation initiation factor IF-3 [Enterococcus faecium Com15]
gi|260558448|ref|ZP_05830644.1| initiation factor 3 [Enterococcus faecium C68]
gi|261207170|ref|ZP_05921859.1| initiation factor 3 [Enterococcus faecium TC 6]
gi|289565291|ref|ZP_06445742.1| translation initiation factor IF-3 [Enterococcus faecium D344SRF]
gi|293379318|ref|ZP_06625464.1| translation initiation factor IF-3 [Enterococcus faecium PC4.1]
gi|293560311|ref|ZP_06676808.1| translation initiation factor IF-3 [Enterococcus faecium E1162]
gi|293567756|ref|ZP_06679097.1| translation initiation factor IF-3 [Enterococcus faecium E1071]
gi|293572984|ref|ZP_06683926.1| translation initiation factor IF-3 [Enterococcus faecium E980]
gi|294615068|ref|ZP_06694954.1| translation initiation factor IF-3 [Enterococcus faecium E1636]
gi|294617094|ref|ZP_06696761.1| translation initiation factor IF-3 [Enterococcus faecium E1679]
gi|294620924|ref|ZP_06700125.1| translation initiation factor IF-3 [Enterococcus faecium U0317]
gi|314938983|ref|ZP_07846248.1| translation initiation factor IF-3 [Enterococcus faecium TX0133a04]
gi|314943466|ref|ZP_07850233.1| translation initiation factor IF-3 [Enterococcus faecium TX0133C]
gi|314948241|ref|ZP_07851635.1| translation initiation factor IF-3 [Enterococcus faecium TX0082]
gi|314951601|ref|ZP_07854647.1| translation initiation factor IF-3 [Enterococcus faecium TX0133A]
gi|314991536|ref|ZP_07857012.1| translation initiation factor IF-3 [Enterococcus faecium TX0133B]
gi|314994869|ref|ZP_07859996.1| translation initiation factor IF-3 [Enterococcus faecium TX0133a01]
gi|383327584|ref|YP_005353468.1| translation initiation factor IF-3 [Enterococcus faecium Aus0004]
gi|389867413|ref|YP_006374836.1| translation initiation factor IF3 [Enterococcus faecium DO]
gi|424762543|ref|ZP_18190047.1| translation initiation factor IF-3 [Enterococcus faecalis TX1337RF]
gi|424791815|ref|ZP_18218124.1| translation initiation factor IF-3 [Enterococcus faecium V689]
gi|424802523|ref|ZP_18228033.1| translation initiation factor IF-3 [Enterococcus faecium S447]
gi|424835015|ref|ZP_18259686.1| translation initiation factor IF-3 [Enterococcus faecium R501]
gi|424856544|ref|ZP_18280757.1| translation initiation factor IF-3 [Enterococcus faecium R499]
gi|424907847|ref|ZP_18331294.1| translation initiation factor IF-3 [Enterococcus faecium R497]
gi|424949178|ref|ZP_18364868.1| translation initiation factor IF-3 [Enterococcus faecium R496]
gi|424953870|ref|ZP_18368803.1| translation initiation factor IF-3 [Enterococcus faecium R494]
gi|424957274|ref|ZP_18372009.1| translation initiation factor IF-3 [Enterococcus faecium R446]
gi|424962462|ref|ZP_18376818.1| translation initiation factor IF-3 [Enterococcus faecium P1986]
gi|424965544|ref|ZP_18379497.1| translation initiation factor IF-3 [Enterococcus faecium P1190]
gi|424968096|ref|ZP_18381753.1| translation initiation factor IF-3 [Enterococcus faecium P1140]
gi|424971471|ref|ZP_18384905.1| translation initiation factor IF-3 [Enterococcus faecium P1139]
gi|424973694|ref|ZP_18386960.1| translation initiation factor IF-3 [Enterococcus faecium P1137]
gi|424976389|ref|ZP_18389484.1| translation initiation factor IF-3 [Enterococcus faecium P1123]
gi|424980831|ref|ZP_18393598.1| translation initiation factor IF-3 [Enterococcus faecium ERV99]
gi|424983393|ref|ZP_18395982.1| translation initiation factor IF-3 [Enterococcus faecium ERV69]
gi|424988527|ref|ZP_18400842.1| translation initiation factor IF-3 [Enterococcus faecium ERV38]
gi|424991571|ref|ZP_18403712.1| translation initiation factor IF-3 [Enterococcus faecium ERV26]
gi|424994793|ref|ZP_18406717.1| translation initiation factor IF-3 [Enterococcus faecium ERV168]
gi|424998518|ref|ZP_18410199.1| translation initiation factor IF-3 [Enterococcus faecium ERV165]
gi|425001152|ref|ZP_18412678.1| translation initiation factor IF-3 [Enterococcus faecium ERV161]
gi|425004542|ref|ZP_18415844.1| translation initiation factor IF-3 [Enterococcus faecium ERV102]
gi|425008089|ref|ZP_18419185.1| translation initiation factor IF-3 [Enterococcus faecium ERV1]
gi|425011427|ref|ZP_18422326.1| translation initiation factor IF-3 [Enterococcus faecium E422]
gi|425014731|ref|ZP_18425391.1| translation initiation factor IF-3 [Enterococcus faecium E417]
gi|425016642|ref|ZP_18427194.1| translation initiation factor IF-3 [Enterococcus faecium C621]
gi|425020076|ref|ZP_18430403.1| translation initiation factor IF-3 [Enterococcus faecium C497]
gi|425024428|ref|ZP_18434493.1| translation initiation factor IF-3 [Enterococcus faecium C1904]
gi|425033395|ref|ZP_18438363.1| translation initiation factor IF-3 [Enterococcus faecium 515]
gi|425034984|ref|ZP_18439840.1| translation initiation factor IF-3 [Enterococcus faecium 514]
gi|425038587|ref|ZP_18443195.1| translation initiation factor IF-3 [Enterococcus faecium 513]
gi|425040984|ref|ZP_18445418.1| translation initiation factor IF-3 [Enterococcus faecium 511]
gi|425045022|ref|ZP_18449146.1| translation initiation factor IF-3 [Enterococcus faecium 510]
gi|425047622|ref|ZP_18451570.1| translation initiation factor IF-3 [Enterococcus faecium 509]
gi|425053052|ref|ZP_18456618.1| translation initiation factor IF-3 [Enterococcus faecium 506]
gi|425055913|ref|ZP_18459377.1| translation initiation factor IF-3 [Enterococcus faecium 505]
gi|425058645|ref|ZP_18462023.1| translation initiation factor IF-3 [Enterococcus faecium 504]
gi|425061576|ref|ZP_18464793.1| translation initiation factor IF-3 [Enterococcus faecium 503]
gi|427397105|ref|ZP_18889731.1| translation initiation factor IF-3 [Enterococcus durans
FB129-CNAB-4]
gi|430823448|ref|ZP_19442019.1| translation initiation factor IF-3 [Enterococcus faecium E0120]
gi|430826271|ref|ZP_19444459.1| translation initiation factor IF-3 [Enterococcus faecium E0164]
gi|430828936|ref|ZP_19447045.1| translation initiation factor IF-3 [Enterococcus faecium E0269]
gi|430831988|ref|ZP_19450036.1| translation initiation factor IF-3 [Enterococcus faecium E0333]
gi|430836541|ref|ZP_19454520.1| translation initiation factor IF-3 [Enterococcus faecium E0680]
gi|430839447|ref|ZP_19457388.1| translation initiation factor IF-3 [Enterococcus faecium E0688]
gi|430842322|ref|ZP_19460237.1| translation initiation factor IF-3 [Enterococcus faecium E1007]
gi|430843222|ref|ZP_19461123.1| translation initiation factor IF-3 [Enterococcus faecium E1050]
gi|430847481|ref|ZP_19465318.1| translation initiation factor IF-3 [Enterococcus faecium E1133]
gi|430850867|ref|ZP_19468624.1| translation initiation factor IF-3 [Enterococcus faecium E1185]
gi|430853133|ref|ZP_19470863.1| translation initiation factor IF-3 [Enterococcus faecium E1258]
gi|430855582|ref|ZP_19473290.1| translation initiation factor IF-3 [Enterococcus faecium E1392]
gi|430858859|ref|ZP_19476478.1| translation initiation factor IF-3 [Enterococcus faecium E1552]
gi|430861481|ref|ZP_19478988.1| translation initiation factor IF-3 [Enterococcus faecium E1573]
gi|430866480|ref|ZP_19481757.1| translation initiation factor IF-3 [Enterococcus faecium E1574]
gi|430892982|ref|ZP_19484603.1| translation initiation factor IF-3 [Enterococcus faecium E1575]
gi|430952677|ref|ZP_19486483.1| translation initiation factor IF-3 [Enterococcus faecium E1576]
gi|431000812|ref|ZP_19488293.1| translation initiation factor IF-3 [Enterococcus faecium E1578]
gi|431036594|ref|ZP_19492364.1| translation initiation factor IF-3 [Enterococcus faecium E1590]
gi|431081545|ref|ZP_19495635.1| translation initiation factor IF-3 [Enterococcus faecium E1604]
gi|431118264|ref|ZP_19498218.1| translation initiation factor IF-3 [Enterococcus faecium E1613]
gi|431207129|ref|ZP_19500829.1| translation initiation factor IF-3 [Enterococcus faecium E1620]
gi|431234091|ref|ZP_19502860.1| translation initiation factor IF-3 [Enterococcus faecium E1622]
gi|431256548|ref|ZP_19504903.1| translation initiation factor IF-3 [Enterococcus faecium E1623]
gi|431303377|ref|ZP_19508224.1| translation initiation factor IF-3 [Enterococcus faecium E1626]
gi|431380347|ref|ZP_19510728.1| translation initiation factor IF-3 [Enterococcus faecium E1627]
gi|431441157|ref|ZP_19513372.1| translation initiation factor IF-3 [Enterococcus faecium E1630]
gi|431506729|ref|ZP_19515555.1| translation initiation factor IF-3 [Enterococcus faecium E1634]
gi|431544252|ref|ZP_19518548.1| translation initiation factor IF-3 [Enterococcus faecium E1731]
gi|431592172|ref|ZP_19521408.1| translation initiation factor IF-3 [Enterococcus faecium E1861]
gi|431730054|ref|ZP_19525531.1| translation initiation factor IF-3 [Enterococcus faecium E1904]
gi|431738906|ref|ZP_19527846.1| translation initiation factor IF-3 [Enterococcus faecium E1972]
gi|431740815|ref|ZP_19529726.1| translation initiation factor IF-3 [Enterococcus faecium E2039]
gi|431744142|ref|ZP_19533014.1| translation initiation factor IF-3 [Enterococcus faecium E2071]
gi|431747076|ref|ZP_19535880.1| translation initiation factor IF-3 [Enterococcus faecium E2134]
gi|431749254|ref|ZP_19537996.1| translation initiation factor IF-3 [Enterococcus faecium E2297]
gi|431752929|ref|ZP_19541608.1| translation initiation factor IF-3 [Enterococcus faecium E2620]
gi|431755776|ref|ZP_19544422.1| translation initiation factor IF-3 [Enterococcus faecium E2883]
gi|431757762|ref|ZP_19546391.1| translation initiation factor IF-3 [Enterococcus faecium E3083]
gi|431760242|ref|ZP_19548844.1| translation initiation factor IF-3 [Enterococcus faecium E3346]
gi|431763039|ref|ZP_19551592.1| translation initiation factor IF-3 [Enterococcus faecium E3548]
gi|431765063|ref|ZP_19553585.1| translation initiation factor IF-3 [Enterococcus faecium E4215]
gi|431767905|ref|ZP_19556348.1| translation initiation factor IF-3 [Enterococcus faecium E1321]
gi|431769595|ref|ZP_19558001.1| translation initiation factor IF-3 [Enterococcus faecium E1644]
gi|431773452|ref|ZP_19561775.1| translation initiation factor IF-3 [Enterococcus faecium E2369]
gi|431776546|ref|ZP_19564807.1| translation initiation factor IF-3 [Enterococcus faecium E2560]
gi|431779536|ref|ZP_19567729.1| translation initiation factor IF-3 [Enterococcus faecium E4389]
gi|431782659|ref|ZP_19570792.1| translation initiation factor IF-3 [Enterococcus faecium E6012]
gi|431784486|ref|ZP_19572525.1| translation initiation factor IF-3 [Enterococcus faecium E6045]
gi|447911747|ref|YP_007393159.1| Translation initiation factor 3 [Enterococcus faecium NRRL B-2354]
gi|227180005|gb|EEI60977.1| translation initiation factor IF3 [Enterococcus faecium TX1330]
gi|257813117|gb|EEV41875.1| translation initiation factor IF-3 [Enterococcus faecium 1,230,933]
gi|257817183|gb|EEV44511.1| translation initiation factor IF-3 [Enterococcus faecium 1,231,502]
gi|257821653|gb|EEV48783.1| translation initiation factor IF-3 [Enterococcus faecium 1,231,501]
gi|257823898|gb|EEV50830.1| translation initiation factor IF-3 [Enterococcus faecium 1,141,733]
gi|257827107|gb|EEV53733.1| translation initiation factor IF-3 [Enterococcus faecium 1,231,410]
gi|257829737|gb|EEV56344.1| translation initiation factor IF-3 [Enterococcus faecium 1,231,408]
gi|257833103|gb|EEV59524.1| translation initiation factor IF-3 [Enterococcus faecium Com12]
gi|257837431|gb|EEV62505.1| translation initiation factor IF-3 [Enterococcus faecium Com15]
gi|260075622|gb|EEW63928.1| initiation factor 3 [Enterococcus faecium C68]
gi|260078798|gb|EEW66500.1| initiation factor 3 [Enterococcus faecium TC 6]
gi|289162947|gb|EFD10796.1| translation initiation factor IF-3 [Enterococcus faecium D344SRF]
gi|291589341|gb|EFF21148.1| translation initiation factor IF-3 [Enterococcus faecium E1071]
gi|291592010|gb|EFF23633.1| translation initiation factor IF-3 [Enterococcus faecium E1636]
gi|291596652|gb|EFF27878.1| translation initiation factor IF-3 [Enterococcus faecium E1679]
gi|291599535|gb|EFF30551.1| translation initiation factor IF-3 [Enterococcus faecium U0317]
gi|291605761|gb|EFF35198.1| translation initiation factor IF-3 [Enterococcus faecium E1162]
gi|291606886|gb|EFF36266.1| translation initiation factor IF-3 [Enterococcus faecium E980]
gi|292642114|gb|EFF60278.1| translation initiation factor IF-3 [Enterococcus faecium PC4.1]
gi|313590851|gb|EFR69696.1| translation initiation factor IF-3 [Enterococcus faecium TX0133a01]
gi|313593820|gb|EFR72665.1| translation initiation factor IF-3 [Enterococcus faecium TX0133B]
gi|313596295|gb|EFR75140.1| translation initiation factor IF-3 [Enterococcus faecium TX0133A]
gi|313597838|gb|EFR76683.1| translation initiation factor IF-3 [Enterococcus faecium TX0133C]
gi|313641692|gb|EFS06272.1| translation initiation factor IF-3 [Enterococcus faecium TX0133a04]
gi|313645374|gb|EFS09954.1| translation initiation factor IF-3 [Enterococcus faecium TX0082]
gi|378937278|gb|AFC62350.1| translation initiation factor IF-3 [Enterococcus faecium Aus0004]
gi|388532662|gb|AFK57854.1| translation initiation factor IF3 [Enterococcus faecium DO]
gi|402424433|gb|EJV56610.1| translation initiation factor IF-3 [Enterococcus faecium TX1337RF]
gi|402918428|gb|EJX39119.1| translation initiation factor IF-3 [Enterococcus faecium V689]
gi|402919713|gb|EJX40291.1| translation initiation factor IF-3 [Enterococcus faecium S447]
gi|402921611|gb|EJX42046.1| translation initiation factor IF-3 [Enterococcus faecium R501]
gi|402929536|gb|EJX49284.1| translation initiation factor IF-3 [Enterococcus faecium R497]
gi|402929785|gb|EJX49510.1| translation initiation factor IF-3 [Enterococcus faecium R499]
gi|402934878|gb|EJX54172.1| translation initiation factor IF-3 [Enterococcus faecium R496]
gi|402937995|gb|EJX57036.1| translation initiation factor IF-3 [Enterococcus faecium R494]
gi|402940744|gb|EJX59539.1| translation initiation factor IF-3 [Enterococcus faecium P1986]
gi|402943483|gb|EJX61967.1| translation initiation factor IF-3 [Enterococcus faecium P1190]
gi|402943926|gb|EJX62381.1| translation initiation factor IF-3 [Enterococcus faecium R446]
gi|402952926|gb|EJX70692.1| translation initiation factor IF-3 [Enterococcus faecium P1140]
gi|402958031|gb|EJX75383.1| translation initiation factor IF-3 [Enterococcus faecium P1137]
gi|402958878|gb|EJX76162.1| translation initiation factor IF-3 [Enterococcus faecium P1139]
gi|402965367|gb|EJX82088.1| translation initiation factor IF-3 [Enterococcus faecium ERV99]
gi|402969704|gb|EJX86096.1| translation initiation factor IF-3 [Enterococcus faecium P1123]
gi|402971676|gb|EJX87935.1| translation initiation factor IF-3 [Enterococcus faecium ERV69]
gi|402971714|gb|EJX87967.1| translation initiation factor IF-3 [Enterococcus faecium ERV38]
gi|402976485|gb|EJX92377.1| translation initiation factor IF-3 [Enterococcus faecium ERV26]
gi|402979142|gb|EJX94828.1| translation initiation factor IF-3 [Enterococcus faecium ERV168]
gi|402982722|gb|EJX98165.1| translation initiation factor IF-3 [Enterococcus faecium ERV165]
gi|402987266|gb|EJY02345.1| translation initiation factor IF-3 [Enterococcus faecium ERV161]
gi|402989156|gb|EJY04105.1| translation initiation factor IF-3 [Enterococcus faecium ERV102]
gi|402993370|gb|EJY07977.1| translation initiation factor IF-3 [Enterococcus faecium ERV1]
gi|402996946|gb|EJY11303.1| translation initiation factor IF-3 [Enterococcus faecium E422]
gi|402997821|gb|EJY12122.1| translation initiation factor IF-3 [Enterococcus faecium E417]
gi|403006391|gb|EJY20035.1| translation initiation factor IF-3 [Enterococcus faecium C621]
gi|403006857|gb|EJY20470.1| translation initiation factor IF-3 [Enterococcus faecium C1904]
gi|403009893|gb|EJY23306.1| translation initiation factor IF-3 [Enterococcus faecium 515]
gi|403010059|gb|EJY23459.1| translation initiation factor IF-3 [Enterococcus faecium C497]
gi|403018972|gb|EJY31611.1| translation initiation factor IF-3 [Enterococcus faecium 514]
gi|403019212|gb|EJY31829.1| translation initiation factor IF-3 [Enterococcus faecium 513]
gi|403027327|gb|EJY39221.1| translation initiation factor IF-3 [Enterococcus faecium 511]
gi|403028132|gb|EJY39972.1| translation initiation factor IF-3 [Enterococcus faecium 510]
gi|403031726|gb|EJY43318.1| translation initiation factor IF-3 [Enterococcus faecium 506]
gi|403032924|gb|EJY44460.1| translation initiation factor IF-3 [Enterococcus faecium 505]
gi|403033337|gb|EJY44846.1| translation initiation factor IF-3 [Enterococcus faecium 509]
gi|403038049|gb|EJY49289.1| translation initiation factor IF-3 [Enterococcus faecium 504]
gi|403040999|gb|EJY52042.1| translation initiation factor IF-3 [Enterococcus faecium 503]
gi|425722431|gb|EKU85326.1| translation initiation factor IF-3 [Enterococcus durans
FB129-CNAB-4]
gi|430442161|gb|ELA52209.1| translation initiation factor IF-3 [Enterococcus faecium E0120]
gi|430445264|gb|ELA55031.1| translation initiation factor IF-3 [Enterococcus faecium E0164]
gi|430480629|gb|ELA57803.1| translation initiation factor IF-3 [Enterococcus faecium E0333]
gi|430482252|gb|ELA59372.1| translation initiation factor IF-3 [Enterococcus faecium E0269]
gi|430488341|gb|ELA65023.1| translation initiation factor IF-3 [Enterococcus faecium E0680]
gi|430490905|gb|ELA67401.1| translation initiation factor IF-3 [Enterococcus faecium E0688]
gi|430493403|gb|ELA69706.1| translation initiation factor IF-3 [Enterococcus faecium E1007]
gi|430497971|gb|ELA73988.1| translation initiation factor IF-3 [Enterococcus faecium E1050]
gi|430535226|gb|ELA75649.1| translation initiation factor IF-3 [Enterococcus faecium E1185]
gi|430537101|gb|ELA77454.1| translation initiation factor IF-3 [Enterococcus faecium E1133]
gi|430540955|gb|ELA81132.1| translation initiation factor IF-3 [Enterococcus faecium E1258]
gi|430544705|gb|ELA84727.1| translation initiation factor IF-3 [Enterococcus faecium E1552]
gi|430546637|gb|ELA86580.1| translation initiation factor IF-3 [Enterococcus faecium E1392]
gi|430549946|gb|ELA89756.1| translation initiation factor IF-3 [Enterococcus faecium E1573]
gi|430551708|gb|ELA91459.1| translation initiation factor IF-3 [Enterococcus faecium E1574]
gi|430555448|gb|ELA94986.1| translation initiation factor IF-3 [Enterococcus faecium E1575]
gi|430557276|gb|ELA96744.1| translation initiation factor IF-3 [Enterococcus faecium E1576]
gi|430562471|gb|ELB01703.1| translation initiation factor IF-3 [Enterococcus faecium E1578]
gi|430563134|gb|ELB02365.1| translation initiation factor IF-3 [Enterococcus faecium E1590]
gi|430565477|gb|ELB04623.1| translation initiation factor IF-3 [Enterococcus faecium E1604]
gi|430568221|gb|ELB07278.1| translation initiation factor IF-3 [Enterococcus faecium E1613]
gi|430571048|gb|ELB09980.1| translation initiation factor IF-3 [Enterococcus faecium E1620]
gi|430573117|gb|ELB11947.1| translation initiation factor IF-3 [Enterococcus faecium E1622]
gi|430577650|gb|ELB16237.1| translation initiation factor IF-3 [Enterococcus faecium E1623]
gi|430580018|gb|ELB18498.1| translation initiation factor IF-3 [Enterococcus faecium E1626]
gi|430582215|gb|ELB20642.1| translation initiation factor IF-3 [Enterococcus faecium E1627]
gi|430586513|gb|ELB24765.1| translation initiation factor IF-3 [Enterococcus faecium E1630]
gi|430587116|gb|ELB25349.1| translation initiation factor IF-3 [Enterococcus faecium E1634]
gi|430591797|gb|ELB29824.1| translation initiation factor IF-3 [Enterococcus faecium E1861]
gi|430592364|gb|ELB30379.1| translation initiation factor IF-3 [Enterococcus faecium E1731]
gi|430595519|gb|ELB33415.1| translation initiation factor IF-3 [Enterococcus faecium E1904]
gi|430596449|gb|ELB34273.1| translation initiation factor IF-3 [Enterococcus faecium E1972]
gi|430602898|gb|ELB40448.1| translation initiation factor IF-3 [Enterococcus faecium E2039]
gi|430605770|gb|ELB43152.1| translation initiation factor IF-3 [Enterococcus faecium E2071]
gi|430607280|gb|ELB44602.1| translation initiation factor IF-3 [Enterococcus faecium E2134]
gi|430611682|gb|ELB48758.1| translation initiation factor IF-3 [Enterococcus faecium E2297]
gi|430612890|gb|ELB49914.1| translation initiation factor IF-3 [Enterococcus faecium E2620]
gi|430616482|gb|ELB53392.1| translation initiation factor IF-3 [Enterococcus faecium E2883]
gi|430618267|gb|ELB55114.1| translation initiation factor IF-3 [Enterococcus faecium E3083]
gi|430622733|gb|ELB59443.1| translation initiation factor IF-3 [Enterococcus faecium E3548]
gi|430624051|gb|ELB60702.1| translation initiation factor IF-3 [Enterococcus faecium E3346]
gi|430629270|gb|ELB65675.1| translation initiation factor IF-3 [Enterococcus faecium E4215]
gi|430629993|gb|ELB66370.1| translation initiation factor IF-3 [Enterococcus faecium E1321]
gi|430636227|gb|ELB72297.1| translation initiation factor IF-3 [Enterococcus faecium E2369]
gi|430636699|gb|ELB72760.1| translation initiation factor IF-3 [Enterococcus faecium E1644]
gi|430640865|gb|ELB76693.1| translation initiation factor IF-3 [Enterococcus faecium E2560]
gi|430641637|gb|ELB77432.1| translation initiation factor IF-3 [Enterococcus faecium E4389]
gi|430647296|gb|ELB82744.1| translation initiation factor IF-3 [Enterococcus faecium E6012]
gi|430649581|gb|ELB84957.1| translation initiation factor IF-3 [Enterococcus faecium E6045]
gi|445187456|gb|AGE29098.1| Translation initiation factor 3 [Enterococcus faecium NRRL B-2354]
Length = 174
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYR+EQQKK + +KK +++KE+++ ID +D++ +L+ ARKFL+ GDKVK +
Sbjct: 65 GKYRFEQQKKDREARKKQKV--INVKEVRLSPTIDLNDFNTKLRNARKFLEKGDKVKASI 122
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I +++ R + ++A+ E K D R++F+ L P
Sbjct: 123 RFKGRAITHKEIGQKVLNRLAEETADIATVEQKAKMDGRSMFLTLAP 169
>gi|405980402|ref|ZP_11038741.1| translation initiation factor IF-3 [Actinomyces turicensis
ACS-279-V-Col4]
gi|404390395|gb|EJZ85464.1| translation initiation factor IF-3 [Actinomyces turicensis
ACS-279-V-Col4]
Length = 195
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE +K + ++ A + LKE++ ID HD+ V+ +FL GDKVKV++
Sbjct: 45 GKFKYEAAQKARDARRNQANTQ--LKEIRFRLKIDDHDFGVKKGHVERFLSQGDKVKVMI 102
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + L++R +VGELA+ E+ +D RN+ ++L P K
Sbjct: 103 MFRGREQSRPEAGVRLLQRLAEEVGELATVESMPRQDGRNMTMVLAPTK 151
>gi|357057537|ref|ZP_09118396.1| translation initiation factor IF-3 [Selenomonas infelix ATCC 43532]
gi|355375196|gb|EHG22485.1| translation initiation factor IF-3 [Selenomonas infelix ATCC 43532]
Length = 187
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 75/129 (58%), Gaps = 14/129 (10%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+RYEQQK++K +KK + +KE+K+ NID+HD++V+LK A +F+++G+KVKV +
Sbjct: 59 GKFRYEQQKREKEAKKKQKT--ISIKEVKLRPNIDEHDFNVKLKNALRFVEEGNKVKVTI 116
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKALLQKAQEP-- 125
+GRE + ++ R + +L + E +N+ +IL P K Q+P
Sbjct: 117 MFRGRELSHPELGRAVLDRVAERMTDLVTIERGAKLEGKNMTMILSP------KVQKPTK 170
Query: 126 ---PKKKDK 131
P K+DK
Sbjct: 171 TVKPAKEDK 179
>gi|430834722|ref|ZP_19452724.1| translation initiation factor IF-3 [Enterococcus faecium E0679]
gi|430484791|gb|ELA61738.1| translation initiation factor IF-3 [Enterococcus faecium E0679]
Length = 174
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYR+EQQKK + +KK +++KE+++ ID +D++ +L+ ARKFL+ GDKVK +
Sbjct: 65 GKYRFEQQKKDREARKKQKV--INVKEVRLSPTIDLNDFNTKLRNARKFLEKGDKVKASI 122
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I +++ R + ++A+ E K D R++F+ L P
Sbjct: 123 RFKGRAITHKEIGQKVLNRLAEETADIATVEQKAKMDGRSMFLTLAP 169
>gi|319778288|ref|YP_004129201.1| translation initiation factor 3 [Taylorella equigenitalis MCE9]
gi|397662068|ref|YP_006502768.1| translation initiation factor IF-3 [Taylorella equigenitalis ATCC
35865]
gi|317108312|gb|ADU91058.1| Translation initiation factor 3 [Taylorella equigenitalis MCE9]
gi|394350247|gb|AFN36161.1| translation initiation factor IF-3 [Taylorella equigenitalis ATCC
35865]
gi|399114733|emb|CCG17528.1| translation initiation factor IF-3 [Taylorella equigenitalis 14/56]
Length = 142
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 69/109 (63%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++Y++QK+ Q+ KS + +KE+K D+ DY V+L+ ++F++DGDK KV +
Sbjct: 33 GKFKYQEQKRL--QEAKSKQKIVQVKEIKFRPGTDEGDYQVKLRNLKRFIEDGDKAKVTL 90
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVPNK 116
+GRE +++ ++++ R + D+G+L + E+ F R + +++ PNK
Sbjct: 91 RFRGREMAHQDLGMKVLERVREDLGDLITVESMPKFEGRQMIMVVAPNK 139
>gi|326204765|ref|ZP_08194620.1| translation initiation factor IF-3 [Clostridium papyrosolvens DSM
2782]
gi|325985136|gb|EGD45977.1| translation initiation factor IF-3 [Clostridium papyrosolvens DSM
2782]
Length = 176
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 67/109 (61%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+ +EQ KK+K +K + +KE+++ I++HD+ V++K A KFL+DGDKVKV +
Sbjct: 69 GKFLFEQGKKEKEAKKNQKV--VSIKEVRLSAKIEEHDFDVKVKNAYKFLQDGDKVKVSI 126
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILVPNK 116
+GRE ++ + E++ +F V E+ E+ +N+ +IL PNK
Sbjct: 127 KFRGREMKYTSDGKEVLAKFAQAVNEVGVPEKQPKLEGKNMIVILNPNK 175
>gi|293556929|ref|ZP_06675490.1| translation initiation factor IF-3 [Enterococcus faecium E1039]
gi|430821007|ref|ZP_19439622.1| translation initiation factor IF-3 [Enterococcus faecium E0045]
gi|291601013|gb|EFF31304.1| translation initiation factor IF-3 [Enterococcus faecium E1039]
gi|430438867|gb|ELA49265.1| translation initiation factor IF-3 [Enterococcus faecium E0045]
Length = 174
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYR+EQQKK + +KK +++KE+++ ID +D++ +L+ ARKFL+ GDKVK +
Sbjct: 65 GKYRFEQQKKDREARKKQKV--INVKEVRLSPTIDLNDFNTKLRNARKFLEKGDKVKASI 122
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I +++ R + ++A+ E K D R++F+ L P
Sbjct: 123 RFKGRAITHKEIGQKVLNRLAEETADIATVEQKAKMDGRSMFLTLAP 169
>gi|85714127|ref|ZP_01045116.1| translation initiation factor IF-3 [Nitrobacter sp. Nb-311A]
gi|85699253|gb|EAQ37121.1| translation initiation factor IF-3 [Nitrobacter sp. Nb-311A]
Length = 171
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+++ QKK +K+ +++KE+K+ ID HDY V++KA ++F ++GDKVK+ +
Sbjct: 66 GKYKFQAQKKAAEARKRQKI--VEIKEIKLRPMIDDHDYDVKMKAMQRFFEEGDKVKITL 123
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE + I +L+ + + DV A E++ F R + ++L P
Sbjct: 124 RYRGREMAHQEIGTKLLDKVKADVAAFAKVEQDARFEGRQVVMVLAP 170
>gi|116250034|ref|YP_765872.1| translation initiation factor IF-3 [Rhizobium leguminosarum bv.
viciae 3841]
gi|115254682|emb|CAK05756.1| putative translation initiation factor [Rhizobium leguminosarum bv.
viciae 3841]
Length = 195
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y QKK +KK +++KE+KM NID HDY V++KA +F +GDKVKV
Sbjct: 89 LGKLKYANQKKAAEARKKQKI--VEVKEIKMRPNIDTHDYEVKMKAMGRFFDEGDKVKVT 146
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE + + ++L+++ + D E A E R + ++L P
Sbjct: 147 LKFRGREMAHQELGMKLLQQVKADTIEFAKVEAEPKLEGRQMMMVLAP 194
>gi|88810666|ref|ZP_01125923.1| translation initiation factor IF-3 [Nitrococcus mobilis Nb-231]
gi|88792296|gb|EAR23406.1| translation initiation factor IF-3 [Nitrococcus mobilis Nb-231]
Length = 177
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 69/110 (62%), Gaps = 3/110 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+++EQ KK++ +KK ++ +KE+K D+ DY V+L+ ++FL+DGDKVKV +
Sbjct: 68 GKWKFEQSKKQQAARKKQ--KQVQIKEVKFRPGTDEGDYQVKLRNLKRFLEDGDKVKVTL 125
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKA 117
+GRE + + +EL+ R ++D+ EL + E+ R + ++L P ++
Sbjct: 126 RFRGREMAHQELGLELLERVESDLMELGAIEQRPRMEGRLMVMMLSPKRS 175
>gi|69248640|ref|ZP_00604785.1| Initiation factor 3 [Enterococcus faecium DO]
gi|406579341|ref|ZP_11054573.1| translation initiation factor IF-3 [Enterococcus sp. GMD4E]
gi|406581541|ref|ZP_11056678.1| translation initiation factor IF-3 [Enterococcus sp. GMD3E]
gi|406583980|ref|ZP_11059018.1| translation initiation factor IF-3 [Enterococcus sp. GMD2E]
gi|406590034|ref|ZP_11064440.1| translation initiation factor IF-3 [Enterococcus sp. GMD1E]
gi|410938121|ref|ZP_11369978.1| translation initiation factor IF3 [Enterococcus sp. GMD5E]
gi|415895306|ref|ZP_11550571.1| translation initiation factor IF-3 [Enterococcus faecium E4453]
gi|416135352|ref|ZP_11598505.1| translation initiation factor IF-3 [Enterococcus faecium E4452]
gi|68194365|gb|EAN08874.1| Initiation factor 3 [Enterococcus faecium DO]
gi|364091681|gb|EHM34123.1| translation initiation factor IF-3 [Enterococcus faecium E4453]
gi|364092206|gb|EHM34599.1| translation initiation factor IF-3 [Enterococcus faecium E4452]
gi|404455646|gb|EKA02490.1| translation initiation factor IF-3 [Enterococcus sp. GMD4E]
gi|404459307|gb|EKA05673.1| translation initiation factor IF-3 [Enterococcus sp. GMD3E]
gi|404464877|gb|EKA10390.1| translation initiation factor IF-3 [Enterococcus sp. GMD2E]
gi|404469954|gb|EKA14647.1| translation initiation factor IF-3 [Enterococcus sp. GMD1E]
gi|410733408|gb|EKQ75332.1| translation initiation factor IF3 [Enterococcus sp. GMD5E]
Length = 167
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYR+EQQKK + +KK +++KE+++ ID +D++ +L+ ARKFL+ GDKVK +
Sbjct: 58 GKYRFEQQKKDREARKKQKV--INVKEVRLSPTIDLNDFNTKLRNARKFLEKGDKVKASI 115
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I +++ R + ++A+ E K D R++F+ L P
Sbjct: 116 RFKGRAITHKEIGQKVLNRLAEETADIATVEQKAKMDGRSMFLTLAP 162
>gi|260907211|ref|ZP_05915533.1| translation initiation factor IF-3 [Brevibacterium linens BL2]
Length = 192
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 65/110 (59%), Gaps = 3/110 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE +K + + +K+ AN LKE++ ID+HDY + +FL GDKVKV++
Sbjct: 46 GKFKYESAQKAR-EARKNQANTA-LKEIRFRLKIDEHDYETKKGHVTRFLSGGDKVKVMI 103
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNKA 117
+GRE + I+L+ R DV EL + E+ D RN+ +++ P+K+
Sbjct: 104 MFRGREQSRPEMGIKLLNRLAEDVSELGTVESSPRVDGRNMVMVIAPHKS 153
>gi|308068135|ref|YP_003869740.1| translation initiation factor IF-3 [Paenibacillus polymyxa E681]
gi|305857414|gb|ADM69202.1| Translation initiation factor IF-3 [Paenibacillus polymyxa E681]
Length = 165
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+RYEQQKK+K +K +D+KE+ NI++HDY + + KFL +GDKVK V
Sbjct: 58 GKFRYEQQKKEKEARKNQKI--VDIKEVWFRSNIEEHDYQTKFRNVVKFLNEGDKVKCSV 115
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE N+ +++ R + +V +L + E R++ +IL P
Sbjct: 116 RFRGREITHANVGQKILERVKLEVADLCTVERQPKLEGRSMIMILAP 162
>gi|241207213|ref|YP_002978309.1| translation initiation factor IF-3 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240861103|gb|ACS58770.1| translation initiation factor IF-3 [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 204
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y QKK +KK +++KE+KM NID HDY V++KA +F +GDKVKV
Sbjct: 98 LGKLKYANQKKAAEARKKQKI--VEVKEIKMRPNIDTHDYEVKMKAMGRFFDEGDKVKVT 155
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE + + ++L+++ + D E A E R + ++L P
Sbjct: 156 LKFRGREMAHQELGMKLLQQVKADTIEFAKVEAEPKLEGRQMMMVLAP 203
>gi|149202824|ref|ZP_01879796.1| translation initiation factor IF-3 [Roseovarius sp. TM1035]
gi|149144106|gb|EDM32140.1| translation initiation factor IF-3 [Roseovarius sp. TM1035]
Length = 209
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 65/108 (60%), Gaps = 3/108 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YEQQK++ +KK + +++KE+K D HDY V++++ KFL+ GDKVK+ +
Sbjct: 102 GKYKYEQQKREAEARKKQ--HIIEIKEIKFRPGTDTHDYDVKMRSVVKFLQGGDKVKITL 159
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVPN 115
+GRE +++ +L+ R +D+ E+ EN R + +++ P
Sbjct: 160 RFRGREMAHQDLGRQLLERIADDIKEVGRVENMPKMEGRQMIMVIGPG 207
>gi|410459268|ref|ZP_11313020.1| translation initiation factor IF-3 [Bacillus azotoformans LMG 9581]
gi|409930461|gb|EKN67460.1| translation initiation factor IF-3 [Bacillus azotoformans LMG 9581]
Length = 181
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+RYEQQKK K +K +++KE+++ I++HD++ +L+ A KFL+ GDKVK +
Sbjct: 72 GKFRYEQQKKDKEARKNQKV--INIKEVRLSPTIEEHDFNTKLRNAIKFLEKGDKVKASI 129
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVP 114
KGR + I ++ R E+A E K R++FI+L P
Sbjct: 130 RFKGRAITHKEIGQRVLDRLAEQCAEIAVVEQKPKMEGRSMFIVLAP 176
>gi|390456803|ref|ZP_10242331.1| translation initiation factor IF-3 [Paenibacillus peoriae KCTC
3763]
Length = 165
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+RYEQQKK+K +K +D+KE+ NI++HDY + + KFL +GDKVK V
Sbjct: 58 GKFRYEQQKKEKEARKNQKI--VDIKEVWFRSNIEEHDYQTKFRNVVKFLNEGDKVKCSV 115
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE N+ +++ R + +V +L + E R++ +IL P
Sbjct: 116 RFRGREITHANVGQKILERVKLEVADLCTVERQPKLEGRSMIMILAP 162
>gi|424873236|ref|ZP_18296898.1| translation initiation factor IF-3 [Rhizobium leguminosarum bv.
viciae WSM1455]
gi|393168937|gb|EJC68984.1| translation initiation factor IF-3 [Rhizobium leguminosarum bv.
viciae WSM1455]
Length = 168
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y QKK +KK +++KE+KM NID HDY V++KA +F +GDKVKV
Sbjct: 62 LGKLKYANQKKAAEARKKQKI--VEVKEIKMRPNIDTHDYEVKMKAMGRFFDEGDKVKVT 119
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE + + ++L+++ + D E A E R + ++L P
Sbjct: 120 LKFRGREMAHQELGMKLLQQVKADTIEFAKVEAEPKLEGRQMMMVLAP 167
>gi|424879612|ref|ZP_18303244.1| translation initiation factor IF-3 [Rhizobium leguminosarum bv.
trifolii WU95]
gi|392515975|gb|EIW40707.1| translation initiation factor IF-3 [Rhizobium leguminosarum bv.
trifolii WU95]
Length = 168
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y QKK +KK +++KE+KM NID HDY V++KA +F +GDKVKV
Sbjct: 62 LGKLKYANQKKAAEARKKQKI--VEVKEIKMRPNIDTHDYEVKMKAMGRFFDEGDKVKVT 119
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE + + ++L+++ + D E A E R + ++L P
Sbjct: 120 LKFRGREMAHQELGMKLLQQVKADTIEFAKVEAEPKLEGRQMMMVLAP 167
>gi|307564490|ref|ZP_07627031.1| translation initiation factor IF-3 [Prevotella amnii CRIS 21A-A]
gi|307346850|gb|EFN92146.1| translation initiation factor IF-3 [Prevotella amnii CRIS 21A-A]
Length = 227
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 78/128 (60%), Gaps = 7/128 (5%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
+K+ Y+Q+K +K ++K + D+KE++ G D+HDY +LK A+ FLK+G+KV+ V
Sbjct: 66 AKFLYQQKKHQKEMKQKQV--KQDIKEIRFGPQTDEHDYLFKLKHAQGFLKEGNKVRAYV 123
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKA-LLQKAQEPP 126
+GR F+ L+ RF ND+ ELA E+ + +F+ L P KA +++K+Q+
Sbjct: 124 FFRGRSILFKEQGEVLLLRFANDLEELAKVEQLPKLEGKKMFLYLTPKKAGVVKKSQQ-- 181
Query: 127 KKKDKQVV 134
K+D++
Sbjct: 182 -KRDRETA 188
>gi|170781627|ref|YP_001709959.1| translation initiation factor IF-3 [Clavibacter michiganensis
subsp. sepedonicus]
gi|169156195|emb|CAQ01337.1| putative translation initiation factor IF-3 [Clavibacter
michiganensis subsp. sepedonicus]
Length = 143
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 3/123 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE +K K + +++ AN + LKE++ ID+HDY + K A FL+DGDKVK ++
Sbjct: 8 GKFKYEAAQKAK-EARRNQANTI-LKEVRFRLKIDKHDYETKRKRAEGFLQDGDKVKAMI 65
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKALLQKAQEPPK 127
+GRE + + L++ F DV E S E RN+ +++ P+K + E
Sbjct: 66 LFRGREQSRPDQGVRLLKMFAEDVAEFGSVESTPTIDGRNMVMVIGPHKNKSEAKAEANA 125
Query: 128 KKD 130
K+D
Sbjct: 126 KRD 128
>gi|392987998|ref|YP_006486591.1| translation initiation factor IF-3 [Enterococcus hirae ATCC 9790]
gi|392335418|gb|AFM69700.1| translation initiation factor IF-3 [Enterococcus hirae ATCC 9790]
Length = 167
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYR+EQQKK + +KK +++KE+++ ID +D++ +L+ ARKFL+ GDKVK +
Sbjct: 58 GKYRFEQQKKDREARKKQKV--INVKEVRLSPTIDVNDFNTKLRNARKFLEKGDKVKASI 115
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I +++ R + ++A+ E K D R++F+ L P
Sbjct: 116 RFKGRAITHKEIGQKVLDRLAEETADIATVEQKAKMDGRSMFLTLAP 162
>gi|148273192|ref|YP_001222753.1| translation initiation factor IF-3 [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
gi|147831122|emb|CAN02074.1| translation initiation factor IF-3 [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
Length = 139
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 3/123 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE +K K + +++ AN + LKE++ ID+HDY + K A FL+DGDKVK ++
Sbjct: 4 GKFKYEAAQKAK-EARRNQANTI-LKEVRFRLKIDKHDYETKRKRAEGFLQDGDKVKAMI 61
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKALLQKAQEPPK 127
+GRE + + L++ F DV E S E RN+ +++ P+K + E
Sbjct: 62 LFRGREQSRPDQGVRLLKMFAEDVAEFGSVESTPTIDGRNMVMVIGPHKNKSEAKAEANA 121
Query: 128 KKD 130
K+D
Sbjct: 122 KRD 124
>gi|339629797|ref|YP_004721440.1| translation initiation factor IF-3 [Sulfobacillus acidophilus TPY]
gi|339287586|gb|AEJ41697.1| translation initiation factor IF-3 [Sulfobacillus acidophilus TPY]
Length = 143
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 67/111 (60%), Gaps = 3/111 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YEQ K+++ +KK +++KELKM I+ HD+ V++K+AR+FL +GDKVK +
Sbjct: 35 GKFKYEQAKRERESRKKQKV--VNIKELKMRPAIEDHDFEVKVKSARRFLAEGDKVKCTM 92
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILVPNKAL 118
+GRE ++A E +++ + V ++ E R + +IL P K +
Sbjct: 93 VFRGREIVHASLAQETLKKLADAVADVGIVERVPKVEGRAMIMILAPKKGV 143
>gi|383809915|ref|ZP_09965427.1| translation initiation factor IF-3 [Rothia aeria F0474]
gi|383447235|gb|EID50220.1| translation initiation factor IF-3 [Rothia aeria F0474]
Length = 186
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YE K + +KK + LKE++ ID H+Y ++ AR+FL GDKVK ++
Sbjct: 33 GKYKYEAAVKARESRKKQV--KAVLKEIRFRLKIDTHNYETKVGHARRFLSGGDKVKAMI 90
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
+GRE + + + L+ R ++ E+++ E++ +D RN+ ++L P
Sbjct: 91 QFRGREQQRPEMGVRLLERLAEELAEVSTVESRPRQDGRNMVMVLAP 137
>gi|297181833|gb|ADI18012.1| translation initiation factor 3 (if-3) [uncultured delta
proteobacterium HF0200_19J16]
Length = 144
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 67/109 (61%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++Y+Q K+ ++ + LKE+KM I++HD+ +L+ A +FL+DGDKVKV V
Sbjct: 35 GKFKYQQSKRSHVARQNQKI--VHLKEVKMKPKIEEHDFQFKLRNALRFLEDGDKVKVGV 92
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNK 116
GR+ +++ IEL+ +FQ ++G+ + E+ R++ +IL P K
Sbjct: 93 RFMGRQIAHKDLGIELLEKFQAEIGDGGTIEQPITSEGRSMHMILAPPK 141
>gi|440784971|ref|ZP_20962008.1| translation initiation factor IF-3 [Clostridium pasteurianum DSM
525]
gi|440218621|gb|ELP57840.1| translation initiation factor IF-3 [Clostridium pasteurianum DSM
525]
Length = 169
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SKY YEQ KK K +K + LKE+++ I+ HD +++ A+KFL +GDKVKV +
Sbjct: 63 SKYLYEQSKKLKLAKKNQKV--VVLKEVRLSPTIEDHDINIKANNAKKFLSNGDKVKVSI 120
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNK 116
+GR+N + +++ F + +GEL + E+ RN+F+IL P K
Sbjct: 121 RFRGRQNNNTQMGKKVLEAFVDKIGELGTIEKAPQLEGRNMFMILGPKK 169
>gi|433771812|ref|YP_007302279.1| translation initiation factor IF-3 [Mesorhizobium australicum
WSM2073]
gi|433663827|gb|AGB42903.1| translation initiation factor IF-3 [Mesorhizobium australicum
WSM2073]
Length = 189
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 61/108 (56%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y QKK +K +++KE+KM NID HDY ++KA R+F ++GDKVK+
Sbjct: 83 LGKLKYANQKKAAEARKNQKV--IEIKEIKMRPNIDSHDYETKMKAVRRFFEEGDKVKLT 140
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE + ++L+ + + +V +A E R + ++L P
Sbjct: 141 LRFRGREMAHMELGMQLLNKVREEVATIAKVEAEPKLEGRQMMMVLAP 188
>gi|417858635|ref|ZP_12503692.1| translation initiation factor IF-3 [Agrobacterium tumefaciens F2]
gi|338824639|gb|EGP58606.1| translation initiation factor IF-3 [Agrobacterium tumefaciens F2]
Length = 140
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 61/108 (56%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y QKK +KK +++KE+KM NID HDY V++KA +F +GDKVKV
Sbjct: 34 LGKLKYSTQKKAAEARKKQKI--VEVKEIKMRPNIDTHDYDVKMKAMNRFFDEGDKVKVT 91
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE + + ++L+ + + D +A E R + ++L P
Sbjct: 92 LKFRGREMAHQELGMKLLLQVKEDTQAIAKVEAEPKLEGRQMMMVLAP 139
>gi|13474222|ref|NP_105790.1| translation initiation factor IF-3 [Mesorhizobium loti MAFF303099]
gi|337264957|ref|YP_004609012.1| translation initiation factor IF-3 [Mesorhizobium opportunistum
WSM2075]
gi|20138505|sp|Q98CP5.1|IF3_RHILO RecName: Full=Translation initiation factor IF-3
gi|14024974|dbj|BAB51576.1| translation initiation factor IF-3 [Mesorhizobium loti MAFF303099]
gi|336025267|gb|AEH84918.1| translation initiation factor IF-3 [Mesorhizobium opportunistum
WSM2075]
Length = 178
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 61/108 (56%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y QKK +K +++KE+KM NID HDY ++KA R+F ++GDKVK+
Sbjct: 72 LGKLKYANQKKAAEARKNQKV--IEIKEIKMRPNIDSHDYETKMKAVRRFFEEGDKVKLT 129
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE + ++L+ + + +V +A E R + ++L P
Sbjct: 130 LRFRGREMAHMELGMQLLNKVREEVATIAKVEAEPKLEGRQMMMVLAP 177
>gi|427703475|ref|YP_007046697.1| translation initiation factor IF-3 [Cyanobium gracile PCC 6307]
gi|427346643|gb|AFY29356.1| translation initiation factor IF-3 [Cyanobium gracile PCC 6307]
Length = 193
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY++EQ+KK K +KKS ++ ++KE+KM Y ID HDY VR+ A +FLK GDKVK V
Sbjct: 75 GKYKFEQEKKAKEAKKKS--HQTEVKEVKMRYKIDSHDYQVRIGQAVRFLKSGDKVKCTV 132
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + +A +L+ R D+ E A + R+ RN+ + L P K
Sbjct: 133 IFRGREIQHTALAEQLLYRMAKDLEENAEIQQPPKREGRNMIMFLSPRK 181
>gi|407798798|ref|ZP_11145701.1| translation initiation factor [Oceaniovalibus guishaninsula
JLT2003]
gi|407059146|gb|EKE45079.1| translation initiation factor [Oceaniovalibus guishaninsula
JLT2003]
Length = 142
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 62/110 (56%), Gaps = 3/110 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
K++YE QK++ +KK +D+KE+K N D HDY V+++ KFL+ GDKVK+
Sbjct: 35 FGKFKYENQKREAEARKKQKT--IDIKEVKFRPNTDTHDYDVKMRNVFKFLEAGDKVKIT 92
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVPNK 116
+ +GRE +N+ +L+ R D EL EN R + +++ P +
Sbjct: 93 LRFRGREMAHQNLGRDLLERVAEDTKELGKVENFPKMEGRQMVMLIGPTR 142
>gi|257069327|ref|YP_003155582.1| translation initiation factor 3 [Brachybacterium faecium DSM 4810]
gi|256560145|gb|ACU85992.1| bacterial translation initiation factor 3 (bIF-3) [Brachybacterium
faecium DSM 4810]
Length = 208
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 68/122 (55%), Gaps = 3/122 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YE K + + +K+ AN + KE++MG ID HDY + + KFL GDKVKVI+
Sbjct: 62 GKYKYEANLKAR-EARKNQANTVQ-KEIRMGLKIDTHDYETKRRNVEKFLDGGDKVKVII 119
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNKALLQKAQEPPK 127
+GRE ++L++R DV + E+ +D RN+ ++ P+K Q E K
Sbjct: 120 RFRGREQARPERGVKLLQRMAEDVADYGFVESHPRQDGRNMVMVFGPHKKKAQAMAEARK 179
Query: 128 KK 129
+K
Sbjct: 180 RK 181
>gi|325291690|ref|YP_004277554.1| translation initiation factor IF-3 [Agrobacterium sp. H13-3]
gi|325059543|gb|ADY63234.1| translation initiation factor IF-3 [Agrobacterium sp. H13-3]
Length = 140
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 61/108 (56%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y QKK +KK +++KE+KM NID HDY V++KA +F +GDKVKV
Sbjct: 34 LGKLKYSTQKKAAEARKKQKI--VEVKEIKMRPNIDTHDYDVKMKAMNRFFDEGDKVKVT 91
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE + + ++L+ + + D +A E R + ++L P
Sbjct: 92 LKFRGREMAHQELGMKLLLQVKEDTQAIAKVEAEPKLEGRQMMMVLAP 139
>gi|158333810|ref|YP_001514982.1| translation initiation factor IF-3 [Acaryochloris marina MBIC11017]
gi|359458646|ref|ZP_09247209.1| translation initiation factor IF-3 [Acaryochloris sp. CCMEE 5410]
gi|226707352|sp|B0CD77.1|IF3_ACAM1 RecName: Full=Translation initiation factor IF-3
gi|158304051|gb|ABW25668.1| translation initiation factor IF-3 [Acaryochloris marina MBIC11017]
Length = 177
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Query: 32 DLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQND 91
D+KE+KM Y I HDY VR+ A++FLK GDKVK V +GRE + ++A L+++ ND
Sbjct: 92 DVKEVKMRYKIQTHDYEVRVNHAKRFLKSGDKVKATVTFRGREIQHSHLAEALLKKMAND 151
Query: 92 VGELASEENKNFRD-RNIFIILVPNK 116
+ + A + R+ RN+ + L P K
Sbjct: 152 LLDFAEIQQAPKREGRNMIMYLSPKK 177
>gi|148555658|ref|YP_001263240.1| translation initiation factor IF-3 [Sphingomonas wittichii RW1]
gi|148500848|gb|ABQ69102.1| bacterial translation initiation factor 3 (bIF-3) [Sphingomonas
wittichii RW1]
Length = 169
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 63/111 (56%), Gaps = 3/111 (2%)
Query: 5 YFFLSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKV 64
+ + K++YE QKK +K ++KE+KM NID HDY ++K +F+ +GDKV
Sbjct: 60 FLDVGKFKYEAQKKANLARKSQKTQ--EIKEIKMRPNIDDHDYETKMKKIHEFIDEGDKV 117
Query: 65 KVIVNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
KV + +GRE + +++++R Q D+ E A E+ R + +++ P
Sbjct: 118 KVTLRFRGRELAHGQLGMQVLQRVQADMAETAKVEQFPRMEGRQMLMVIAP 168
>gi|303248735|ref|ZP_07334988.1| translation initiation factor IF-3 [Desulfovibrio fructosovorans
JJ]
gi|302489900|gb|EFL49828.1| translation initiation factor IF-3 [Desulfovibrio fructosovorans
JJ]
Length = 161
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 66/108 (61%), Gaps = 3/108 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
+++Y+QQKK + +KK A+ + LKE+K+ D+HDY +LK R+FL++GD+ KV V
Sbjct: 48 GRFKYQQQKKLQEARKK--ASTVQLKEIKVRPKTDEHDYQTKLKHIRRFLEEGDRCKVTV 105
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPN 115
+GRE ++ + ++ R D+G+LA E+ R + ++L P
Sbjct: 106 FFRGREIVHKDRGVLILSRVVADLGDLAKVEQEPRTEGRMMTMLLAPQ 153
>gi|154509025|ref|ZP_02044667.1| hypothetical protein ACTODO_01542 [Actinomyces odontolyticus ATCC
17982]
gi|293192345|ref|ZP_06609456.1| translation initiation factor IF-3 [Actinomyces odontolyticus
F0309]
gi|396583585|ref|ZP_10484113.1| translation initiation factor IF-3 [Actinomyces sp. ICM47]
gi|399524057|ref|ZP_10764640.1| translation initiation factor IF-3 [Atopobium sp. ICM58]
gi|399526381|ref|ZP_10766160.1| translation initiation factor IF-3 [Actinomyces sp. ICM39]
gi|153798659|gb|EDN81079.1| translation initiation factor IF-3 [Actinomyces odontolyticus ATCC
17982]
gi|292820260|gb|EFF79254.1| translation initiation factor IF-3 [Actinomyces odontolyticus
F0309]
gi|395548931|gb|EJG16102.1| translation initiation factor IF-3 [Actinomyces sp. ICM47]
gi|398362999|gb|EJN46649.1| translation initiation factor IF-3 [Actinomyces sp. ICM39]
gi|398374832|gb|EJN52359.1| translation initiation factor IF-3 [Atopobium sp. ICM58]
Length = 195
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YE +K + ++ A + LKE++ ID HD+ V+ +FL GDKVKV++
Sbjct: 45 GKYKYEAAQKARDARRNQANTQ--LKEIRFRLKIDDHDFGVKKGHVERFLSAGDKVKVMI 102
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + L++R ++G+LA+ E+ +D RN+ ++L P K
Sbjct: 103 MFRGREQSRPEAGVRLLQRLAEEIGDLATVESMPRQDGRNMTMVLAPTK 151
>gi|323702722|ref|ZP_08114383.1| translation initiation factor IF-3 [Desulfotomaculum nigrificans
DSM 574]
gi|323532385|gb|EGB22263.1| translation initiation factor IF-3 [Desulfotomaculum nigrificans
DSM 574]
Length = 145
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YEQ K++K +KK + +KE+K+ I++HDY V++K A +FLKDGDKVK +
Sbjct: 35 GKFKYEQSKREKEAKKKQRI--IQVKEVKLRPRIEEHDYQVKVKHAERFLKDGDKVKATI 92
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE + L+ + D+ +L + E +N+ +IL P
Sbjct: 93 MFRGREIVHTELGQNLLNKLAEDLKDLCTVERQPKLEGKNMIMILAP 139
>gi|47097525|ref|ZP_00235064.1| translation initiation factor IF-3 [Listeria monocytogenes str.
1/2a F6854]
gi|47014108|gb|EAL05102.1| translation initiation factor IF-3 [Listeria monocytogenes str.
1/2a F6854]
Length = 112
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 63/105 (60%), Gaps = 3/105 (2%)
Query: 11 YRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNL 70
+R+EQQKK K +K + +KE+++ ID+HD+ +L+ ARKFL+ GDKVK +
Sbjct: 6 FRFEQQKKDKEARKNQKV--IVMKEVRLSPTIDEHDFDTKLRNARKFLEKGDKVKCSIRF 63
Query: 71 KGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I +++ RF +L + E + D R++F++L P
Sbjct: 64 KGRAITHKEIGQKVLDRFAKACEDLCTIEQRPKMDGRSMFLVLAP 108
>gi|15887604|ref|NP_353285.1| translation initiation factor 3 [Agrobacterium fabrum str. C58]
gi|335032986|ref|ZP_08526358.1| translation initiation factor IF-3 [Agrobacterium sp. ATCC 31749]
gi|15155147|gb|AAK86070.1| translation initiation factor 3 [Agrobacterium fabrum str. C58]
gi|333795662|gb|EGL66987.1| translation initiation factor IF-3 [Agrobacterium sp. ATCC 31749]
Length = 140
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 61/108 (56%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y QKK +KK +++KE+KM NID HDY V++KA +F +GDKVKV
Sbjct: 34 LGKLKYSTQKKAAEARKKQKI--VEVKEIKMRPNIDTHDYDVKMKAMNRFFDEGDKVKVT 91
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE + + ++L+ + + D +A E R + ++L P
Sbjct: 92 LKFRGREMAHQELGMKLLLQVKEDTQAIAKVEAEPKLEGRQMMMVLAP 139
>gi|418407785|ref|ZP_12981102.1| translation initiation factor IF-3 [Agrobacterium tumefaciens 5A]
gi|358005771|gb|EHJ98096.1| translation initiation factor IF-3 [Agrobacterium tumefaciens 5A]
Length = 134
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 61/108 (56%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y QKK +KK +++KE+KM NID HDY V++KA +F +GDKVKV
Sbjct: 28 LGKLKYSTQKKAAEARKKQKI--VEVKEIKMRPNIDTHDYDVKMKAMNRFFDEGDKVKVT 85
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE + + ++L+ + + D +A E R + ++L P
Sbjct: 86 LKFRGREMAHQELGMKLLLQVKEDTQAIAKVEAEPKLEGRQMMMVLAP 133
>gi|418937175|ref|ZP_13490840.1| translation initiation factor IF-3 [Rhizobium sp. PDO1-076]
gi|375056119|gb|EHS52314.1| translation initiation factor IF-3 [Rhizobium sp. PDO1-076]
Length = 132
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y QKK +KK +++KE+KM NID HDY V++KA +F ++GDKVKV
Sbjct: 26 LGKLKYANQKKAAEARKKQKI--VEVKEIKMRPNIDTHDYEVKMKAMNRFFEEGDKVKVT 83
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE + + ++L+ + + D +A E R + ++L P
Sbjct: 84 LKFRGREMAHQELGMKLLLQVKEDTVAIAKVEAEPKLEGRQMMMVLAP 131
>gi|445120951|ref|ZP_21379383.1| translation initiation factor IF-3 [Prevotella nigrescens F0103]
gi|444839210|gb|ELX66290.1| translation initiation factor IF-3 [Prevotella nigrescens F0103]
Length = 227
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 68/114 (59%), Gaps = 3/114 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SK+ Y+Q+K +K ++K + D+KE++ G D+HDY +LK A++FL +G+KV+ V
Sbjct: 61 SKFLYQQKKHQKEMKQKQV--KQDIKEIRFGPQTDEHDYQFKLKHAQEFLNEGNKVRAYV 118
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKALLQK 121
+GR F+ L+ RF ND+ ELA E+ + +F+ L P KA + K
Sbjct: 119 FFRGRSILFKEQGEVLLLRFANDLEELAKVEQLPKLEGKKMFLYLSPKKAGITK 172
>gi|337293367|emb|CCB91356.1| translation initiation factor IF-3 [Waddlia chondrophila 2032/99]
Length = 144
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+RY+Q K++K + K A++++ +KE+K+ NI++HD +++ A+ FL+ G+KVKV
Sbjct: 35 GKFRYDQTKREK--ESKKASHQIKVKEVKVKPNINEHDLQTKMRHAKDFLEKGNKVKVTC 92
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILVPNK 116
+GRE ++I LI+R D+ E+A E R + ++L P+K
Sbjct: 93 MFRGREMAHKSIGERLIQRIVEDLNEVAVCETPMKMFGRFLTVVLAPHK 141
>gi|225019253|ref|ZP_03708445.1| hypothetical protein CLOSTMETH_03206 [Clostridium methylpentosum
DSM 5476]
gi|224947884|gb|EEG29093.1| hypothetical protein CLOSTMETH_03206 [Clostridium methylpentosum
DSM 5476]
Length = 177
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY++EQ K++K +K +++KE++M NID HD++ ++ A KFLK GDKVKV V
Sbjct: 66 GKYKFEQSKREKEARKNQKI--VEVKEVRMSLNIDTHDFNTKVNQAIKFLKSGDKVKVSV 123
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS 97
+GRE N+ L+ RF+ V E+ S
Sbjct: 124 RFRGREMAHTNLGHGLLDRFKTAVEEIGS 152
>gi|158426068|ref|YP_001527360.1| translation initiation factor IF-3 [Azorhizobium caulinodans ORS
571]
gi|172047848|sp|A8HWL0.1|IF3_AZOC5 RecName: Full=Translation initiation factor IF-3
gi|158332957|dbj|BAF90442.1| translation initiation factor 3 [Azorhizobium caulinodans ORS 571]
Length = 174
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
+++Y+ QKK +KK +++KE+K+ ID HDY V++KA +F ++GDKVKV +
Sbjct: 69 GRFKYQNQKKASEARKKQKV--VEVKEIKLRPGIDTHDYDVKMKAMLRFFEEGDKVKVTL 126
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE ++I +L+++ + DV +A E R + +IL P
Sbjct: 127 RFRGREMAHQDIGYKLLQKLKEDVTNIAKVEAEPMLEGRQMIMILAP 173
>gi|163784104|ref|ZP_02179052.1| initiation factor IF-3 [Hydrogenivirga sp. 128-5-R1-1]
gi|159880632|gb|EDP74188.1| initiation factor IF-3 [Hydrogenivirga sp. 128-5-R1-1]
Length = 139
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Query: 28 ANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRR 87
A+ +KE+K G I++HDY ++K R+FL+DGDKVKVI+ +GREN I +L R
Sbjct: 48 AHMQHVKEMKFGLKIEKHDYETKVKHIREFLEDGDKVKVIIMFRGRENVHPEIGQQLAER 107
Query: 88 FQNDVGELASEENKNFRD-RNIFIILVPNK 116
DV E+ E + ++ RN+ LVP K
Sbjct: 108 IIEDVKEVGKVEKQPKKEGRNMIFTLVPLK 137
>gi|359788412|ref|ZP_09291389.1| translation initiation factor IF-3 [Mesorhizobium alhagi
CCNWXJ12-2]
gi|359255877|gb|EHK58770.1| translation initiation factor IF-3 [Mesorhizobium alhagi
CCNWXJ12-2]
Length = 148
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y QKK +K +++KE+KM NID HDY V+++A R+F ++GDKVK+
Sbjct: 42 LGKLKYANQKKAAEARKHQKV--IEIKEIKMRPNIDIHDYEVKMRAVRRFFEEGDKVKLT 99
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE + ++L+ + + +V +A E R + ++L P
Sbjct: 100 LRFRGREMAHMELGMQLLNKVKEEVATIAKVEAEPKLEGRQMMMVLAP 147
>gi|75674268|ref|YP_316689.1| translation initiation factor IF-3 [Nitrobacter winogradskyi
Nb-255]
gi|74419138|gb|ABA03337.1| bacterial translation initiation factor 3 (bIF-3) [Nitrobacter
winogradskyi Nb-255]
Length = 171
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+++ QKK +K+ +++KE+K+ ID HDY+V++KA ++F ++GDKVK+ +
Sbjct: 66 GKYKFQAQKKAAEARKRQKI--VEIKEIKLRPMIDDHDYNVKMKAMQRFFEEGDKVKITL 123
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE + I +L+ + + DV A E++ F R + ++L P
Sbjct: 124 RYRGREMAHQEIGTKLLDKVKADVSAYAKVEQDARFEGRQVVMVLAP 170
>gi|58039290|ref|YP_191254.1| protein translation initiation factor 3 [Gluconobacter oxydans
621H]
gi|58001704|gb|AAW60598.1| Bacterial protein translation initiation factor 3 (IF-3)
[Gluconobacter oxydans 621H]
Length = 173
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YEQQKKK +KK +++KE+K+ +HD+ +LKA FL +GDKVK+ +
Sbjct: 68 GKFKYEQQKKKNEARKKQKV--IEIKEVKVRPGTGEHDFQTKLKAIHSFLDEGDKVKISL 125
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
KGRE + + I+++ R + +V E A E+ +R + +++ P
Sbjct: 126 RFKGREMAHQELGIKMLERIRQEVEEKAKVEQMPRLENRQMLMVIAP 172
>gi|72162465|ref|YP_290122.1| translation initiation factor 3 [Thermobifida fusca YX]
gi|71916197|gb|AAZ56099.1| bacterial translation initiation factor 3 (bIF-3) [Thermobifida
fusca YX]
Length = 179
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE K + +K ++ +KE+K+ IDQHDY + +FL+ GDKVKV +
Sbjct: 51 GKFKYESAVKAREARKNQSSTV--IKEIKLRPKIDQHDYETKKGHVERFLRSGDKVKVTI 108
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + L+RR DV EL E++ +D RN+ ++L P+K
Sbjct: 109 MFRGREQSRPELGYRLLRRLAEDVQELGQVESQAKQDGRNMVMVLGPHK 157
>gi|254432422|ref|ZP_05046125.1| translation initiation factor IF-3 [Cyanobium sp. PCC 7001]
gi|197626875|gb|EDY39434.1| translation initiation factor IF-3 [Cyanobium sp. PCC 7001]
Length = 230
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY++EQ+KK K +KKS ++ ++KE+KM Y IDQHDY VR+ A +FLK GDKVK V
Sbjct: 74 GKYKFEQEKKAKEAKKKS--HQTEVKEVKMRYKIDQHDYDVRIGQASRFLKAGDKVKCTV 131
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
+GRE + +A L+ R D+ A + R+ RN+ + L P
Sbjct: 132 IFRGREIQHTALAEVLLMRMAKDLEAAAEIQQPPKREGRNMIMFLSP 178
>gi|340349415|ref|ZP_08672433.1| translation initiation factor IF3 [Prevotella nigrescens ATCC
33563]
gi|339611622|gb|EGQ16443.1| translation initiation factor IF3 [Prevotella nigrescens ATCC
33563]
Length = 232
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 68/114 (59%), Gaps = 3/114 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SK+ Y+Q+K +K ++K + D+KE++ G D+HDY +LK A++FL +G+KV+ V
Sbjct: 66 SKFLYQQKKHQKEMKQKQV--KQDIKEIRFGPQTDEHDYQFKLKHAQEFLNEGNKVRAYV 123
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKALLQK 121
+GR F+ L+ RF ND+ ELA E+ + +F+ L P KA + K
Sbjct: 124 FFRGRSILFKEQGEVLLLRFANDLEELAKVEQLPKLEGKKMFLYLSPKKAGITK 177
>gi|374851840|dbj|BAL54788.1| translation initiation factor IF-3 [uncultured candidate division
OP1 bacterium]
gi|374857014|dbj|BAL59867.1| translation initiation factor IF-3 [uncultured candidate division
OP1 bacterium]
Length = 179
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYRY Q+K++K + + LKE++M I++HD+ +L+ RKFL D DKV+V V
Sbjct: 35 GKYRYRQEKREKKRPRGG-----KLKEIRMTTQIEKHDFETKLRHIRKFLTDEDKVRVTV 89
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKALLQKAQEPPK 127
+GRE N EL+ R + ++ E+ R R++ ++LVP K P K
Sbjct: 90 IFRGREIVHINRGRELLERIAKETADIGRVEQYPKERGRSLQMLLVPGKGA---PAAPTK 146
Query: 128 KKDKQVVDEVST 139
+Q V E T
Sbjct: 147 AASEQAVSEPMT 158
>gi|379007088|ref|YP_005256539.1| translation initiation factor 3 (bIF-3) [Sulfobacillus acidophilus
DSM 10332]
gi|361053350|gb|AEW04867.1| bacterial translation initiation factor 3 (bIF-3) [Sulfobacillus
acidophilus DSM 10332]
Length = 170
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 67/111 (60%), Gaps = 3/111 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YEQ K+++ +KK +++KELKM I+ HD+ V++K+AR+FL +GDKVK +
Sbjct: 62 GKFKYEQAKRERESRKKQKV--VNIKELKMRPAIEDHDFEVKVKSARRFLAEGDKVKCTM 119
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILVPNKAL 118
+GRE ++A E +++ + V ++ E R + +IL P K +
Sbjct: 120 VFRGREIVHASLAQETLKKLADAVADVGIVERVPKVEGRAMIMILAPKKGV 170
>gi|422439839|ref|ZP_16516659.1| translation initiation factor IF-3 [Propionibacterium acnes
HL037PA3]
gi|422471924|ref|ZP_16548415.1| translation initiation factor IF-3 [Propionibacterium acnes
HL037PA2]
gi|422573677|ref|ZP_16649238.1| translation initiation factor IF-3 [Propionibacterium acnes
HL044PA1]
gi|313836584|gb|EFS74298.1| translation initiation factor IF-3 [Propionibacterium acnes
HL037PA2]
gi|314928094|gb|EFS91925.1| translation initiation factor IF-3 [Propionibacterium acnes
HL044PA1]
gi|314972094|gb|EFT16191.1| translation initiation factor IF-3 [Propionibacterium acnes
HL037PA3]
Length = 266
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE +K + + +++ AN + +KE+K+ ID HDY + +FLK GDKVK+ +
Sbjct: 102 GKFKYEAAQKAR-ESRRNQANSI-IKEMKLRPKIDDHDYETKKGHVLRFLKAGDKVKITI 159
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + + L+RR +D+ E A+ E+ ++ RN+ +IL P +
Sbjct: 160 MFRGREQSRPELGVNLLRRLADDLTEYATVESPPKQEGRNMLMILAPTR 208
>gi|89067761|ref|ZP_01155215.1| translation initiation factor [Oceanicola granulosus HTCC2516]
gi|89046731|gb|EAR52786.1| translation initiation factor [Oceanicola granulosus HTCC2516]
Length = 136
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
K++YEQQK++ +KK +++KE+K N D HDY V+++ KFL+ GDKVKV
Sbjct: 28 FGKFKYEQQKRESEARKKQKT--IEVKEVKFRPNTDTHDYDVKMRNVFKFLESGDKVKVT 85
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVPN 115
+ +GRE +++ L+ R +DV E+ EN R + +++ P
Sbjct: 86 LRFRGREMAHQDLGRRLLERVADDVQEIGKVENMPKMEGRQMVMMIGPT 134
>gi|50842895|ref|YP_056122.1| translation initiation factor IF-3 [Propionibacterium acnes
KPA171202]
gi|342213288|ref|ZP_08706013.1| translation initiation factor IF-3 [Propionibacterium sp.
CC003-HC2]
gi|354607829|ref|ZP_09025797.1| hypothetical protein HMPREF1003_02364 [Propionibacterium sp.
5_U_42AFAA]
gi|386024373|ref|YP_005942678.1| translation initiation factor IF-3 [Propionibacterium acnes 266]
gi|417930349|ref|ZP_12573728.1| translation initiation factor IF-3 [Propionibacterium acnes SK182]
gi|50840497|gb|AAT83164.1| translation initiation factor IF-3 [Propionibacterium acnes
KPA171202]
gi|332675831|gb|AEE72647.1| translation initiation factor IF-3 [Propionibacterium acnes 266]
gi|340768832|gb|EGR91357.1| translation initiation factor IF-3 [Propionibacterium sp.
CC003-HC2]
gi|340772476|gb|EGR94980.1| translation initiation factor IF-3 [Propionibacterium acnes SK182]
gi|353556375|gb|EHC25746.1| hypothetical protein HMPREF1003_02364 [Propionibacterium sp.
5_U_42AFAA]
Length = 268
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE +K + + +++ AN + +KE+K+ ID HDY + +FLK GDKVK+ +
Sbjct: 103 GKFKYEAAQKAR-ESRRNQANSI-IKEMKLRPKIDDHDYETKKGHVLRFLKAGDKVKITI 160
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + + L+RR +D+ E A+ E+ ++ RN+ +IL P +
Sbjct: 161 MFRGREQSRPELGVNLLRRLADDLTEYATVESPPKQEGRNMLMILAPTR 209
>gi|297621144|ref|YP_003709281.1| Translation initiation factor IF-3 [Waddlia chondrophila WSU
86-1044]
gi|297376445|gb|ADI38275.1| Translation initiation factor IF-3 [Waddlia chondrophila WSU
86-1044]
Length = 168
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+RY+Q K++K + K A++++ +KE+K+ NI++HD +++ A+ FL+ G+KVKV
Sbjct: 59 GKFRYDQTKREK--ESKKASHQIKVKEVKVKPNINEHDLQTKMRHAKDFLEKGNKVKVTC 116
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILVPNK 116
+GRE ++I LI+R D+ E+A E R + ++L P+K
Sbjct: 117 MFRGREMAHKSIGERLIQRIVEDLNEVAVCETPMKMFGRFLTVVLAPHK 165
>gi|373857556|ref|ZP_09600297.1| translation initiation factor IF-3 [Bacillus sp. 1NLA3E]
gi|372452688|gb|EHP26158.1| translation initiation factor IF-3 [Bacillus sp. 1NLA3E]
Length = 167
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+EQQKK+K +K + KE+++ ID+HD++ +LK A KFL+ GDKVK +
Sbjct: 59 GKFRFEQQKKEKEARKNQKI--ITTKEVRLSPTIDEHDFNTKLKNAIKFLEKGDKVKASI 116
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I ++ RF E+A+ E+ D R++F++L P
Sbjct: 117 RFKGRAITHKEIGQRVLVRFSEACTEVATVESYPKMDGRSMFMVLAP 163
>gi|336399663|ref|ZP_08580463.1| bacterial translation initiation factor 3 (bIF-3) [Prevotella
multisaccharivorax DSM 17128]
gi|336069399|gb|EGN58033.1| bacterial translation initiation factor 3 (bIF-3) [Prevotella
multisaccharivorax DSM 17128]
Length = 226
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 70/114 (61%), Gaps = 3/114 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SK+ Y+Q+K++K ++K ++++KE++ G D HDY +LK A++FL++G+KV+ V
Sbjct: 66 SKFLYQQKKRQKEMKQKQV--KVEVKEIRFGPQTDDHDYQFKLKHAKEFLEEGNKVRAYV 123
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKALLQK 121
+GR F++ L+ RF ND+ E A E+ + +F+ L P KA + K
Sbjct: 124 FFRGRSILFKDQGEVLLLRFANDLEEWAKVEQMPKLEGKKMFLFLAPKKAGVAK 177
>gi|349573836|ref|ZP_08885807.1| translation initiation factor IF3 [Neisseria shayeganii 871]
gi|348014624|gb|EGY53497.1| translation initiation factor IF3 [Neisseria shayeganii 871]
Length = 155
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YEQ KK+ +KK + +KE+K D+ DY ++++ +FL DGDKVKV +
Sbjct: 48 GKYKYEQSKKRDEAKKKQ--KMVQIKEIKFRPGTDEGDYQIKMRNINRFLADGDKVKVTL 105
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNK 116
+GRE + +L+ R +ND+ E+A+ E+ R + +++ P K
Sbjct: 106 RFRGREMAHQEFGAQLLERVKNDLAEVATVEQFPKMEGRQMVMMIAPKK 154
>gi|414176695|ref|ZP_11430924.1| translation initiation factor IF-3 [Afipia broomeae ATCC 49717]
gi|410886848|gb|EKS34660.1| translation initiation factor IF-3 [Afipia broomeae ATCC 49717]
Length = 132
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+Y QKK +KK +++KE+K+ ID HDY V+++A +F ++GDKVK+ +
Sbjct: 27 GKYKYSAQKKAAEARKKQKV--VEIKEIKLRPMIDDHDYDVKMRAMLRFFEEGDKVKITL 84
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE + I +L+ + + V ++A E++ F R + ++L P
Sbjct: 85 RYRGREMAHQEIGTKLLDKVKAAVADVAKVEQDARFEGRQVVMVLAP 131
>gi|319780189|ref|YP_004139665.1| translation initiation factor IF-3 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317166077|gb|ADV09615.1| translation initiation factor IF-3 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 178
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 61/108 (56%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y QKK +K +++KE+KM NID HDY ++KA R+F ++GDKVK+
Sbjct: 72 LGKLKYANQKKAAEARKNQKV--IEIKEIKMRPNIDSHDYETKMKAVRRFFEEGDKVKLT 129
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE + ++L+ + + +V +A E R + ++L P
Sbjct: 130 LRFRGREMAHMELGMQLLNKVREEVATIAKVEAEPKLEGRQMMMVLSP 177
>gi|269792335|ref|YP_003317239.1| translation initiation factor IF-3 [Thermanaerovibrio
acidaminovorans DSM 6589]
gi|269099970|gb|ACZ18957.1| translation initiation factor IF-3 [Thermanaerovibrio
acidaminovorans DSM 6589]
Length = 194
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 68/114 (59%), Gaps = 4/114 (3%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYR++QQK+ K +KK + LKE+KM ID HDY+ ++KA R FL+DG +VKV V
Sbjct: 55 GKYRFQQQKRDKDARKKQKSQA--LKEIKMRPKIDVHDYTFKVKAVRSFLEDGHRVKVSV 112
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRDRNIFIILVPNKALLQKA 122
+GRE F + E++ R + DV +L E + + + +++ LLQ+A
Sbjct: 113 FFRGREMAFLDRGREVLDRVRKDVEDLGKVEMEPRMEGSYMRMMI--APLLQQA 164
>gi|342218536|ref|ZP_08711147.1| translation initiation factor IF-3 [Megasphaera sp. UPII 135-E]
gi|341589597|gb|EGS32869.1| translation initiation factor IF-3 [Megasphaera sp. UPII 135-E]
Length = 144
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 65/105 (61%), Gaps = 3/105 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYRYEQQK++K + K + LKE+K+ NI+ HD+ V+LK A++FL DG KVKV +
Sbjct: 35 GKYRYEQQKREK--EAKKKQKVLVLKEVKLRPNIEDHDFYVKLKGAQRFLGDGSKVKVTI 92
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIIL 112
+GRE + +L+ RF ++ E+A E+ RN+ +++
Sbjct: 93 MFRGREMSHPELGRDLLLRFAKELNEVAHVEKEPKLEGRNMTMVM 137
>gi|333923254|ref|YP_004496834.1| translation initiation factor IF-3 [Desulfotomaculum
carboxydivorans CO-1-SRB]
gi|333748815|gb|AEF93922.1| Translation initiation factor IF-3 [Desulfotomaculum
carboxydivorans CO-1-SRB]
Length = 173
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YEQ K++K +KK + +KE+K+ I++HDY V++K A +FLKDGDKVK +
Sbjct: 63 GKFKYEQSKREKEAKKKQRI--IQVKEVKLRPRIEEHDYQVKVKHAERFLKDGDKVKATI 120
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE + L+ + D+ +L + E +N+ +IL P
Sbjct: 121 MFRGREIVHTELGQNLLNKLAEDLKDLCTVERQPKLEGKNMIMILAP 167
>gi|387133482|ref|YP_006299454.1| translation initiation factor IF-3 [Prevotella intermedia 17]
gi|386376330|gb|AFJ08493.1| translation initiation factor IF-3 [Prevotella intermedia 17]
Length = 229
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 68/114 (59%), Gaps = 3/114 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SK+ Y+Q+K +K ++K + D+KE++ G D+HDY +LK A++FL +G+KV+ V
Sbjct: 66 SKFLYQQKKHQKEMKQKQV--KQDIKEIRFGPQTDEHDYQFKLKHAQEFLNEGNKVRAYV 123
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKALLQK 121
+GR F+ L+ RF ND+ ELA E+ + +F+ L P KA + K
Sbjct: 124 FFRGRSILFKEQGEVLLLRFANDLEELAKVEQLPKLEGKKMFLYLSPKKAGITK 177
>gi|108804140|ref|YP_644077.1| translation initiation factor 3 [Rubrobacter xylanophilus DSM 9941]
gi|108765383|gb|ABG04265.1| bacterial translation initiation factor 3 (bIF-3) [Rubrobacter
xylanophilus DSM 9941]
Length = 175
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 72/125 (57%), Gaps = 3/125 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+Y++++ +K +KK ++++E+K+ I HD+ + +FL+ GDKVKV +
Sbjct: 48 GKYKYQKEQARKAARKKQV--NINVREIKLRPKIGDHDFETKKGHVERFLRGGDKVKVTI 105
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNKALLQKAQEPPK 127
+GRE + + L+RR +D+ +L EN+ D RN+ ++L P K + + AQE
Sbjct: 106 MFRGREVQHPELGERLLRRLADDLSDLGRIENQPKLDGRNMVMVLAPRKDVAKGAQEAKA 165
Query: 128 KKDKQ 132
+ K+
Sbjct: 166 SRGKE 170
>gi|288553676|ref|YP_003425611.1| translation initiation factor IF-3 [Bacillus pseudofirmus OF4]
gi|288544836|gb|ADC48719.1| translation initiation factor IF-3 [Bacillus pseudofirmus OF4]
Length = 167
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+RYEQQKK K +KK +++KE+++ I+ HD++ +L+ ARKFL+ GDKVK +
Sbjct: 59 GKFRYEQQKKDKEARKKQKV--INVKEVRLSPTIEDHDFNTKLRNARKFLEKGDKVKAAI 116
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVP 114
+GR I ++ R + ++A E K R++F+IL P
Sbjct: 117 RFRGRAITHSQIGRVVLERLAKECEDVAVIEAKPKMEGRSMFLILAP 163
>gi|374578840|ref|ZP_09651934.1| translation initiation factor IF-3 [Desulfosporosinus youngiae DSM
17734]
gi|374414922|gb|EHQ87357.1| translation initiation factor IF-3 [Desulfosporosinus youngiae DSM
17734]
Length = 171
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YEQ K+ K +KK + M++KE+K+ NI+ HD+ + + A++FL+DGDKVKV +
Sbjct: 63 GKYKYEQAKRDKEARKKQKS--MEIKEVKLRPNIEDHDFETKARNAQRFLQDGDKVKVTI 120
Query: 69 NLKGRENEFRNIAIELIRRFQNDV-GELASEENKNFRDRNIFIILVPNK 116
+GRE + L R E A E RN+ +IL K
Sbjct: 121 MFRGREVTHPELGRALCIRLAEFCKAECAVEREPKLEGRNMIMILASTK 169
>gi|392530405|ref|ZP_10277542.1| translation initiation factor IF-3 [Carnobacterium maltaromaticum
ATCC 35586]
Length = 166
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 69/107 (64%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+EQQKK++ +K +++KE+++ ID +D++ +L+ ARKFL+ GDKVK +
Sbjct: 58 GKFRFEQQKKEREARKNQKI--INVKEVRLSPTIDVNDFNTKLRNARKFLEKGDKVKASI 115
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I +++ R ++ +LA+ E+K D R++F++L P
Sbjct: 116 RFKGRAITHKEIGHKVLTRLADETEDLATVESKPKMDGRSMFMLLAP 162
>gi|417931360|ref|ZP_12574728.1| translation initiation factor IF-3 [Propionibacterium acnes
SK182B-JCVI]
gi|340776099|gb|EGR98149.1| translation initiation factor IF-3 [Propionibacterium acnes
SK182B-JCVI]
Length = 238
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE +K + + +++ AN + +KE+K+ ID HDY + +FLK GDKVK+ +
Sbjct: 72 GKFKYEAAQKAR-ESRRNQANSI-IKEMKLRPKIDDHDYETKKGHVLRFLKAGDKVKITI 129
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + + L+RR +D+ E A+ E+ ++ RN+ +IL P +
Sbjct: 130 MFRGREQSRPELGVNLLRRLADDLTEYATVESPPKQEGRNMLMILAPTR 178
>gi|422512789|ref|ZP_16588916.1| translation initiation factor IF-3 [Propionibacterium acnes
HL087PA2]
gi|313808092|gb|EFS46569.1| translation initiation factor IF-3 [Propionibacterium acnes
HL087PA2]
Length = 278
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE +K + + +++ AN + +KE+K+ ID HDY + +FLK GDKVK+ +
Sbjct: 113 GKFKYEAAQKAR-ESRRNQANSI-IKEMKLRPKIDDHDYETKKGHVLRFLKAGDKVKITI 170
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + + L+RR +D+ E A+ E+ ++ RN+ +IL P +
Sbjct: 171 MFRGREQSRPELGVNLLRRLADDLTEYATVESPPKQEGRNMLMILAPTR 219
>gi|373252650|ref|ZP_09540768.1| translation initiation factor 3 [Nesterenkonia sp. F]
Length = 205
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 64/110 (58%), Gaps = 3/110 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE K + +K A LKE++ ID+HDY ++ AR+FL GDKVK I+
Sbjct: 38 GKWKYEAAVKARESRKNQTATV--LKEVRFRLKIDEHDYETKVGNARRFLSAGDKVKAII 95
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNKA 117
+GRE + + + L+RR +D+ +L + E+ +D R++ +++ P K
Sbjct: 96 QFRGREQQRPEMGVRLLRRVADDLEDLGAVESTPRQDGRHMVMVIGPLKT 145
>gi|29375498|ref|NP_814652.1| translation initiation factor IF-3 [Enterococcus faecalis V583]
gi|227517833|ref|ZP_03947882.1| translation initiation factor IF-3 [Enterococcus faecalis TX0104]
gi|227555025|ref|ZP_03985072.1| translation initiation factor IF-3 [Enterococcus faecalis HH22]
gi|229546758|ref|ZP_04435483.1| translation initiation factor IF-3 [Enterococcus faecalis TX1322]
gi|229548850|ref|ZP_04437575.1| translation initiation factor IF-3 [Enterococcus faecalis ATCC
29200]
gi|255971364|ref|ZP_05421950.1| translation initiation factor IF-3 [Enterococcus faecalis T1]
gi|256617782|ref|ZP_05474628.1| initiation factor 3 [Enterococcus faecalis ATCC 4200]
gi|256761668|ref|ZP_05502248.1| translation initiation factor IF-3 [Enterococcus faecalis T3]
gi|256854243|ref|ZP_05559607.1| translation initiation factor IF-3 [Enterococcus faecalis T8]
gi|256957230|ref|ZP_05561401.1| initiation factor 3 [Enterococcus faecalis DS5]
gi|256964267|ref|ZP_05568438.1| initiation factor 3 [Enterococcus faecalis HIP11704]
gi|257077798|ref|ZP_05572159.1| initiation factor 3 [Enterococcus faecalis JH1]
gi|257081157|ref|ZP_05575518.1| translation initiation factor IF-3 [Enterococcus faecalis E1Sol]
gi|257083826|ref|ZP_05578187.1| translation initiation factor IF-3 [Enterococcus faecalis Fly1]
gi|257086251|ref|ZP_05580612.1| initiation factor 3 [Enterococcus faecalis D6]
gi|257089324|ref|ZP_05583685.1| translation initiation factor IF-3 [Enterococcus faecalis CH188]
gi|257415476|ref|ZP_05592470.1| initiation factor 3 [Enterococcus faecalis ARO1/DG]
gi|257418508|ref|ZP_05595502.1| initiation factor [Enterococcus faecalis T11]
gi|257421158|ref|ZP_05598148.1| translation initiation factor IF-3 [Enterococcus faecalis X98]
gi|294781324|ref|ZP_06746670.1| translation initiation factor IF-3 [Enterococcus faecalis PC1.1]
gi|300860032|ref|ZP_07106120.1| translation initiation factor IF-3 [Enterococcus faecalis TUSoD
Ef11]
gi|307267989|ref|ZP_07549377.1| translation initiation factor IF-3 [Enterococcus faecalis TX4248]
gi|307271913|ref|ZP_07553181.1| translation initiation factor IF-3 [Enterococcus faecalis TX0855]
gi|307275331|ref|ZP_07556474.1| translation initiation factor IF-3 [Enterococcus faecalis TX2134]
gi|307278391|ref|ZP_07559466.1| translation initiation factor IF-3 [Enterococcus faecalis TX0860]
gi|307286721|ref|ZP_07566807.1| translation initiation factor IF-3 [Enterococcus faecalis TX0109]
gi|307290930|ref|ZP_07570820.1| translation initiation factor IF-3 [Enterococcus faecalis TX0411]
gi|312901544|ref|ZP_07760817.1| translation initiation factor IF-3 [Enterococcus faecalis TX0470]
gi|312904474|ref|ZP_07763633.1| translation initiation factor IF-3 [Enterococcus faecalis TX0635]
gi|312952819|ref|ZP_07771681.1| translation initiation factor IF-3 [Enterococcus faecalis TX0102]
gi|384512605|ref|YP_005707698.1| translation initiation factor IF3 [Enterococcus faecalis OG1RF]
gi|384517961|ref|YP_005705266.1| translation initiation factor IF-3 [Enterococcus faecalis 62]
gi|397699304|ref|YP_006537092.1| translation initiation factor IF-3 [Enterococcus faecalis D32]
gi|421512999|ref|ZP_15959788.1| Translation initiation factor 3 [Enterococcus faecalis ATCC 29212]
gi|422685491|ref|ZP_16743707.1| translation initiation factor IF-3 [Enterococcus faecalis TX4000]
gi|422689730|ref|ZP_16747834.1| translation initiation factor IF-3 [Enterococcus faecalis TX0630]
gi|422692200|ref|ZP_16750222.1| translation initiation factor IF-3 [Enterococcus faecalis TX0031]
gi|422694514|ref|ZP_16752505.1| translation initiation factor IF-3 [Enterococcus faecalis TX4244]
gi|422696519|ref|ZP_16754476.1| translation initiation factor IF-3 [Enterococcus faecalis TX1346]
gi|422699472|ref|ZP_16757336.1| translation initiation factor IF-3 [Enterococcus faecalis TX1342]
gi|422703394|ref|ZP_16761216.1| translation initiation factor IF-3 [Enterococcus faecalis TX1302]
gi|422707372|ref|ZP_16765067.1| translation initiation factor IF-3 [Enterococcus faecalis TX0043]
gi|422711695|ref|ZP_16768622.1| translation initiation factor IF-3 [Enterococcus faecalis TX0027]
gi|422713396|ref|ZP_16770146.1| translation initiation factor IF-3 [Enterococcus faecalis TX0309A]
gi|422717578|ref|ZP_16774262.1| translation initiation factor IF-3 [Enterococcus faecalis TX0309B]
gi|422720321|ref|ZP_16776939.1| translation initiation factor IF-3 [Enterococcus faecalis TX0017]
gi|422722843|ref|ZP_16779392.1| translation initiation factor IF-3 [Enterococcus faecalis TX2137]
gi|422727433|ref|ZP_16783874.1| translation initiation factor IF-3 [Enterococcus faecalis TX0312]
gi|422729900|ref|ZP_16786295.1| translation initiation factor IF-3 [Enterococcus faecalis TX0012]
gi|422730972|ref|ZP_16787353.1| translation initiation factor IF-3 [Enterococcus faecalis TX0645]
gi|422735280|ref|ZP_16791554.1| translation initiation factor IF-3 [Enterococcus faecalis TX1341]
gi|422738337|ref|ZP_16793536.1| translation initiation factor IF-3 [Enterococcus faecalis TX2141]
gi|422866992|ref|ZP_16913596.1| translation initiation factor IF-3 [Enterococcus faecalis TX1467]
gi|424671041|ref|ZP_18108056.1| translation initiation factor IF-3 [Enterococcus faecalis 599]
gi|424676342|ref|ZP_18113216.1| translation initiation factor IF-3 [Enterococcus faecalis ERV103]
gi|424679313|ref|ZP_18116139.1| translation initiation factor IF-3 [Enterococcus faecalis ERV116]
gi|424682939|ref|ZP_18119696.1| translation initiation factor IF-3 [Enterococcus faecalis ERV129]
gi|424685738|ref|ZP_18122428.1| translation initiation factor IF-3 [Enterococcus faecalis ERV25]
gi|424689212|ref|ZP_18125801.1| translation initiation factor IF-3 [Enterococcus faecalis ERV31]
gi|424692893|ref|ZP_18129365.1| translation initiation factor IF-3 [Enterococcus faecalis ERV37]
gi|424695647|ref|ZP_18132027.1| translation initiation factor IF-3 [Enterococcus faecalis ERV41]
gi|424700428|ref|ZP_18136618.1| translation initiation factor IF-3 [Enterococcus faecalis ERV62]
gi|424702828|ref|ZP_18138970.1| translation initiation factor IF-3 [Enterococcus faecalis ERV63]
gi|424712030|ref|ZP_18144224.1| translation initiation factor IF-3 [Enterococcus faecalis ERV65]
gi|424717356|ref|ZP_18146649.1| translation initiation factor IF-3 [Enterococcus faecalis ERV68]
gi|424719581|ref|ZP_18148725.1| translation initiation factor IF-3 [Enterococcus faecalis ERV72]
gi|424723406|ref|ZP_18152388.1| translation initiation factor IF-3 [Enterococcus faecalis ERV73]
gi|424726896|ref|ZP_18155544.1| translation initiation factor IF-3 [Enterococcus faecalis ERV81]
gi|424735002|ref|ZP_18163479.1| translation initiation factor IF-3 [Enterococcus faecalis ERV85]
gi|424748458|ref|ZP_18176603.1| translation initiation factor IF-3 [Enterococcus faecalis ERV93]
gi|424757265|ref|ZP_18185019.1| translation initiation factor IF-3 [Enterococcus faecalis R508]
gi|428766420|ref|YP_007152531.1| translation initiation factor IF-3 [Enterococcus faecalis str.
Symbioflor 1]
gi|430358793|ref|ZP_19425553.1| translation initiation factor IF-3 [Enterococcus faecalis OG1X]
gi|430366964|ref|ZP_19427677.1| translation initiation factor IF-3 [Enterococcus faecalis M7]
gi|39931262|sp|Q837C9.1|IF3_ENTFA RecName: Full=Translation initiation factor IF-3
gi|29342958|gb|AAO80722.1| translation initiation factor IF-3 [Enterococcus faecalis V583]
gi|227074723|gb|EEI12686.1| translation initiation factor IF-3 [Enterococcus faecalis TX0104]
gi|227175851|gb|EEI56823.1| translation initiation factor IF-3 [Enterococcus faecalis HH22]
gi|229306079|gb|EEN72075.1| translation initiation factor IF-3 [Enterococcus faecalis ATCC
29200]
gi|229308107|gb|EEN74094.1| translation initiation factor IF-3 [Enterococcus faecalis TX1322]
gi|255962382|gb|EET94858.1| translation initiation factor IF-3 [Enterococcus faecalis T1]
gi|256597309|gb|EEU16485.1| initiation factor 3 [Enterococcus faecalis ATCC 4200]
gi|256682919|gb|EEU22614.1| translation initiation factor IF-3 [Enterococcus faecalis T3]
gi|256709803|gb|EEU24847.1| translation initiation factor IF-3 [Enterococcus faecalis T8]
gi|256947726|gb|EEU64358.1| initiation factor 3 [Enterococcus faecalis DS5]
gi|256954763|gb|EEU71395.1| initiation factor 3 [Enterococcus faecalis HIP11704]
gi|256985828|gb|EEU73130.1| initiation factor 3 [Enterococcus faecalis JH1]
gi|256989187|gb|EEU76489.1| translation initiation factor IF-3 [Enterococcus faecalis E1Sol]
gi|256991856|gb|EEU79158.1| translation initiation factor IF-3 [Enterococcus faecalis Fly1]
gi|256994281|gb|EEU81583.1| initiation factor 3 [Enterococcus faecalis D6]
gi|256998136|gb|EEU84656.1| translation initiation factor IF-3 [Enterococcus faecalis CH188]
gi|257157304|gb|EEU87264.1| initiation factor 3 [Enterococcus faecalis ARO1/DG]
gi|257160336|gb|EEU90296.1| initiation factor [Enterococcus faecalis T11]
gi|257162982|gb|EEU92942.1| translation initiation factor IF-3 [Enterococcus faecalis X98]
gi|294451660|gb|EFG20116.1| translation initiation factor IF-3 [Enterococcus faecalis PC1.1]
gi|300850850|gb|EFK78599.1| translation initiation factor IF-3 [Enterococcus faecalis TUSoD
Ef11]
gi|306498000|gb|EFM67527.1| translation initiation factor IF-3 [Enterococcus faecalis TX0411]
gi|306502199|gb|EFM71483.1| translation initiation factor IF-3 [Enterococcus faecalis TX0109]
gi|306504897|gb|EFM74092.1| translation initiation factor IF-3 [Enterococcus faecalis TX0860]
gi|306507965|gb|EFM77092.1| translation initiation factor IF-3 [Enterococcus faecalis TX2134]
gi|306511419|gb|EFM80421.1| translation initiation factor IF-3 [Enterococcus faecalis TX0855]
gi|306515630|gb|EFM84157.1| translation initiation factor IF-3 [Enterococcus faecalis TX4248]
gi|310629335|gb|EFQ12618.1| translation initiation factor IF-3 [Enterococcus faecalis TX0102]
gi|310632172|gb|EFQ15455.1| translation initiation factor IF-3 [Enterococcus faecalis TX0635]
gi|311291339|gb|EFQ69895.1| translation initiation factor IF-3 [Enterococcus faecalis TX0470]
gi|315027099|gb|EFT39031.1| translation initiation factor IF-3 [Enterococcus faecalis TX2137]
gi|315029784|gb|EFT41716.1| translation initiation factor IF-3 [Enterococcus faecalis TX4000]
gi|315032457|gb|EFT44389.1| translation initiation factor IF-3 [Enterococcus faecalis TX0017]
gi|315034309|gb|EFT46241.1| translation initiation factor IF-3 [Enterococcus faecalis TX0027]
gi|315145799|gb|EFT89815.1| translation initiation factor IF-3 [Enterococcus faecalis TX2141]
gi|315148071|gb|EFT92087.1| translation initiation factor IF-3 [Enterococcus faecalis TX4244]
gi|315149673|gb|EFT93689.1| translation initiation factor IF-3 [Enterococcus faecalis TX0012]
gi|315152986|gb|EFT97002.1| translation initiation factor IF-3 [Enterococcus faecalis TX0031]
gi|315155217|gb|EFT99233.1| translation initiation factor IF-3 [Enterococcus faecalis TX0043]
gi|315157544|gb|EFU01561.1| translation initiation factor IF-3 [Enterococcus faecalis TX0312]
gi|315163027|gb|EFU07044.1| translation initiation factor IF-3 [Enterococcus faecalis TX0645]
gi|315165226|gb|EFU09243.1| translation initiation factor IF-3 [Enterococcus faecalis TX1302]
gi|315167951|gb|EFU11968.1| translation initiation factor IF-3 [Enterococcus faecalis TX1341]
gi|315172016|gb|EFU16033.1| translation initiation factor IF-3 [Enterococcus faecalis TX1342]
gi|315174843|gb|EFU18860.1| translation initiation factor IF-3 [Enterococcus faecalis TX1346]
gi|315574173|gb|EFU86364.1| translation initiation factor IF-3 [Enterococcus faecalis TX0309B]
gi|315577304|gb|EFU89495.1| translation initiation factor IF-3 [Enterococcus faecalis TX0630]
gi|315581684|gb|EFU93875.1| translation initiation factor IF-3 [Enterococcus faecalis TX0309A]
gi|323480094|gb|ADX79533.1| translation initiation factor IF-3 [Enterococcus faecalis 62]
gi|327534494|gb|AEA93328.1| translation initiation factor IF3 [Enterococcus faecalis OG1RF]
gi|329577910|gb|EGG59331.1| translation initiation factor IF-3 [Enterococcus faecalis TX1467]
gi|397335943|gb|AFO43615.1| translation initiation factor IF-3 [Enterococcus faecalis D32]
gi|401673922|gb|EJS80291.1| Translation initiation factor 3 [Enterococcus faecalis ATCC 29212]
gi|402356996|gb|EJU91712.1| translation initiation factor IF-3 [Enterococcus faecalis ERV103]
gi|402357347|gb|EJU92059.1| translation initiation factor IF-3 [Enterococcus faecalis ERV116]
gi|402359601|gb|EJU94226.1| translation initiation factor IF-3 [Enterococcus faecalis 599]
gi|402366132|gb|EJV00530.1| translation initiation factor IF-3 [Enterococcus faecalis ERV129]
gi|402369148|gb|EJV03439.1| translation initiation factor IF-3 [Enterococcus faecalis ERV31]
gi|402369536|gb|EJV03813.1| translation initiation factor IF-3 [Enterococcus faecalis ERV25]
gi|402373824|gb|EJV07880.1| translation initiation factor IF-3 [Enterococcus faecalis ERV62]
gi|402376619|gb|EJV10554.1| translation initiation factor IF-3 [Enterococcus faecalis ERV37]
gi|402379499|gb|EJV13297.1| translation initiation factor IF-3 [Enterococcus faecalis ERV41]
gi|402381814|gb|EJV15508.1| translation initiation factor IF-3 [Enterococcus faecalis ERV65]
gi|402385605|gb|EJV19138.1| translation initiation factor IF-3 [Enterococcus faecalis ERV68]
gi|402386087|gb|EJV19599.1| translation initiation factor IF-3 [Enterococcus faecalis ERV63]
gi|402396149|gb|EJV29222.1| translation initiation factor IF-3 [Enterococcus faecalis ERV72]
gi|402398237|gb|EJV31194.1| translation initiation factor IF-3 [Enterococcus faecalis ERV81]
gi|402398581|gb|EJV31519.1| translation initiation factor IF-3 [Enterococcus faecalis ERV73]
gi|402405159|gb|EJV37759.1| translation initiation factor IF-3 [Enterococcus faecalis ERV85]
gi|402407338|gb|EJV39870.1| translation initiation factor IF-3 [Enterococcus faecalis R508]
gi|402408380|gb|EJV40851.1| translation initiation factor IF-3 [Enterococcus faecalis ERV93]
gi|427184593|emb|CCO71817.1| translation initiation factor IF-3 [Enterococcus faecalis str.
Symbioflor 1]
gi|429513618|gb|ELA03197.1| translation initiation factor IF-3 [Enterococcus faecalis OG1X]
gi|429516778|gb|ELA06254.1| translation initiation factor IF-3 [Enterococcus faecalis M7]
Length = 173
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 67/107 (62%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+EQQKK++ +KK +++KE+++ ID +D++ +L+ ARKFL+ GDKVK +
Sbjct: 65 GKFRFEQQKKEREARKKQKV--INVKEVRLSPTIDVNDFNTKLRNARKFLEKGDKVKASI 122
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I +++ R + ++A+ E K D R++F+ L P
Sbjct: 123 RFKGRAITHKEIGQKVLDRLAEETADIATVEQKAKMDGRSMFLTLAP 169
>gi|357039270|ref|ZP_09101064.1| Translation initiation factor IF-3 [Desulfotomaculum gibsoniae DSM
7213]
gi|355358169|gb|EHG05937.1| Translation initiation factor IF-3 [Desulfotomaculum gibsoniae DSM
7213]
Length = 155
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+RYEQ K++K +K +++KE+K+ NI+ HD+ V+ K A +FLKDGDKVKV +
Sbjct: 46 GKFRYEQSKREKEARKNQRI--INVKEVKLRPNIEDHDFEVKAKNAIRFLKDGDKVKVTI 103
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GR+ ++ +L+ R V +LA+ E +N+ +IL P
Sbjct: 104 MFRGRQIVHPDLGKKLLVRMAEQVTDLANVERQPKLEGKNMIMILAP 150
>gi|395203479|ref|ZP_10394670.1| translation initiation factor IF-3 [Propionibacterium humerusii
P08]
gi|422390037|ref|ZP_16470133.1| translation initiation factor IF-3 [Propionibacterium acnes
HL103PA1]
gi|327327991|gb|EGE69760.1| translation initiation factor IF-3 [Propionibacterium acnes
HL103PA1]
gi|328907935|gb|EGG27695.1| translation initiation factor IF-3 [Propionibacterium humerusii
P08]
Length = 212
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE +K + + +++ AN + +KE+K+ ID HDY + +FLK GDKVK+ +
Sbjct: 48 GKFKYEAAQKAR-ESRRNQANSI-IKEMKLRPKIDDHDYETKKGHVLRFLKAGDKVKITI 105
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + + L+RR +D+ E A+ E+ ++ RN+ +IL P +
Sbjct: 106 MFRGREQSRPELGVNLLRRLADDLTEYATVESPPKQEGRNMLMILAPTR 154
>gi|295113895|emb|CBL32532.1| bacterial translation initiation factor 3 (bIF-3) [Enterococcus sp.
7L76]
Length = 167
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 67/107 (62%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+EQQKK++ +KK +++KE+++ ID +D++ +L+ ARKFL+ GDKVK +
Sbjct: 59 GKFRFEQQKKEREARKKQKV--INVKEVRLSPTIDVNDFNTKLRNARKFLEKGDKVKASI 116
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I +++ R + ++A+ E K D R++F+ L P
Sbjct: 117 RFKGRAITHKEIGQKVLDRLAEETADIATVEQKAKMDGRSMFLTLAP 163
>gi|282854559|ref|ZP_06263894.1| translation initiation factor IF-3 [Propionibacterium acnes J139]
gi|289426514|ref|ZP_06428257.1| translation initiation factor IF-3 [Propionibacterium acnes SK187]
gi|289427759|ref|ZP_06429470.1| translation initiation factor IF-3 [Propionibacterium acnes J165]
gi|295130951|ref|YP_003581614.1| translation initiation factor IF-3 [Propionibacterium acnes SK137]
gi|335051467|ref|ZP_08544386.1| translation initiation factor IF-3 [Propionibacterium sp. 409-HC1]
gi|335053626|ref|ZP_08546461.1| translation initiation factor IF-3 [Propionibacterium sp. 434-HC2]
gi|365963106|ref|YP_004944672.1| translation initiation factor IF-3 [Propionibacterium acnes TypeIA2
P.acn31]
gi|365965346|ref|YP_004946911.1| translation initiation factor IF-3 [Propionibacterium acnes TypeIA2
P.acn17]
gi|365974280|ref|YP_004955839.1| translation initiation factor IF-3 [Propionibacterium acnes TypeIA2
P.acn33]
gi|386069660|ref|YP_005984556.1| translation initiation factor IF-3 [Propionibacterium acnes ATCC
11828]
gi|387503791|ref|YP_005945020.1| translation initiation factor IF-3 [Propionibacterium acnes 6609]
gi|407935825|ref|YP_006851467.1| translation initiation factor IF-3 [Propionibacterium acnes C1]
gi|419421562|ref|ZP_13961790.1| translation initiation factor IF-3 [Propionibacterium acnes PRP-38]
gi|422385650|ref|ZP_16465782.1| translation initiation factor IF-3 [Propionibacterium acnes
HL096PA3]
gi|422387703|ref|ZP_16467814.1| translation initiation factor IF-3 [Propionibacterium acnes
HL096PA2]
gi|422393622|ref|ZP_16473672.1| translation initiation factor IF-3 [Propionibacterium acnes
HL099PA1]
gi|422395474|ref|ZP_16475514.1| translation initiation factor IF-3 [Propionibacterium acnes
HL097PA1]
gi|422425642|ref|ZP_16502576.1| translation initiation factor IF-3 [Propionibacterium acnes
HL043PA1]
gi|422427354|ref|ZP_16504270.1| translation initiation factor IF-3 [Propionibacterium acnes
HL087PA1]
gi|422430694|ref|ZP_16507574.1| translation initiation factor IF-3 [Propionibacterium acnes
HL072PA2]
gi|422432681|ref|ZP_16509550.1| translation initiation factor IF-3 [Propionibacterium acnes
HL059PA2]
gi|422434153|ref|ZP_16511013.1| translation initiation factor IF-3 [Propionibacterium acnes
HL083PA2]
gi|422438604|ref|ZP_16515442.1| translation initiation factor IF-3 [Propionibacterium acnes
HL092PA1]
gi|422444354|ref|ZP_16521149.1| translation initiation factor IF-3 [Propionibacterium acnes
HL002PA1]
gi|422446943|ref|ZP_16523681.1| translation initiation factor IF-3 [Propionibacterium acnes
HL027PA1]
gi|422449725|ref|ZP_16526449.1| translation initiation factor IF-3 [Propionibacterium acnes
HL036PA3]
gi|422451436|ref|ZP_16528139.1| translation initiation factor IF-3 [Propionibacterium acnes
HL030PA2]
gi|422453589|ref|ZP_16530284.1| translation initiation factor IF-3 [Propionibacterium acnes
HL087PA3]
gi|422456261|ref|ZP_16532929.1| translation initiation factor IF-3 [Propionibacterium acnes
HL030PA1]
gi|422458798|ref|ZP_16535449.1| translation initiation factor IF-3 [Propionibacterium acnes
HL050PA2]
gi|422462731|ref|ZP_16539353.1| translation initiation factor IF-3 [Propionibacterium acnes
HL038PA1]
gi|422463071|ref|ZP_16539690.1| translation initiation factor IF-3 [Propionibacterium acnes
HL060PA1]
gi|422467347|ref|ZP_16543901.1| translation initiation factor IF-3 [Propionibacterium acnes
HL110PA4]
gi|422469426|ref|ZP_16545951.1| translation initiation factor IF-3 [Propionibacterium acnes
HL110PA3]
gi|422473678|ref|ZP_16550152.1| translation initiation factor IF-3 [Propionibacterium acnes
HL056PA1]
gi|422477379|ref|ZP_16553812.1| translation initiation factor IF-3 [Propionibacterium acnes
HL007PA1]
gi|422479908|ref|ZP_16556312.1| translation initiation factor IF-3 [Propionibacterium acnes
HL063PA1]
gi|422481433|ref|ZP_16557833.1| translation initiation factor IF-3 [Propionibacterium acnes
HL036PA1]
gi|422485948|ref|ZP_16562305.1| translation initiation factor IF-3 [Propionibacterium acnes
HL043PA2]
gi|422487502|ref|ZP_16563834.1| translation initiation factor IF-3 [Propionibacterium acnes
HL013PA2]
gi|422491469|ref|ZP_16567783.1| translation initiation factor IF-3 [Propionibacterium acnes
HL020PA1]
gi|422491872|ref|ZP_16568182.1| translation initiation factor IF-3 [Propionibacterium acnes
HL086PA1]
gi|422495113|ref|ZP_16571402.1| translation initiation factor IF-3 [Propionibacterium acnes
HL025PA1]
gi|422497150|ref|ZP_16573427.1| translation initiation factor IF-3 [Propionibacterium acnes
HL002PA3]
gi|422499340|ref|ZP_16575604.1| translation initiation factor IF-3 [Propionibacterium acnes
HL063PA2]
gi|422503356|ref|ZP_16579597.1| translation initiation factor IF-3 [Propionibacterium acnes
HL027PA2]
gi|422505371|ref|ZP_16581601.1| translation initiation factor IF-3 [Propionibacterium acnes
HL036PA2]
gi|422506875|ref|ZP_16583093.1| translation initiation factor IF-3 [Propionibacterium acnes
HL046PA2]
gi|422510047|ref|ZP_16586198.1| translation initiation factor IF-3 [Propionibacterium acnes
HL059PA1]
gi|422516900|ref|ZP_16593008.1| translation initiation factor IF-3 [Propionibacterium acnes
HL110PA2]
gi|422517400|ref|ZP_16593500.1| translation initiation factor IF-3 [Propionibacterium acnes
HL074PA1]
gi|422521126|ref|ZP_16597158.1| translation initiation factor IF-3 [Propionibacterium acnes
HL045PA1]
gi|422522606|ref|ZP_16598627.1| translation initiation factor IF-3 [Propionibacterium acnes
HL053PA2]
gi|422525796|ref|ZP_16601797.1| translation initiation factor IF-3 [Propionibacterium acnes
HL083PA1]
gi|422529010|ref|ZP_16604985.1| translation initiation factor IF-3 [Propionibacterium acnes
HL053PA1]
gi|422530624|ref|ZP_16606583.1| translation initiation factor IF-3 [Propionibacterium acnes
HL110PA1]
gi|422533797|ref|ZP_16609728.1| translation initiation factor IF-3 [Propionibacterium acnes
HL072PA1]
gi|422536805|ref|ZP_16612708.1| translation initiation factor IF-3 [Propionibacterium acnes
HL078PA1]
gi|422540365|ref|ZP_16616234.1| translation initiation factor IF-3 [Propionibacterium acnes
HL013PA1]
gi|422542359|ref|ZP_16618211.1| translation initiation factor IF-3 [Propionibacterium acnes
HL037PA1]
gi|422544395|ref|ZP_16620233.1| translation initiation factor IF-3 [Propionibacterium acnes
HL082PA1]
gi|422547255|ref|ZP_16623077.1| translation initiation factor IF-3 [Propionibacterium acnes
HL050PA3]
gi|422548481|ref|ZP_16624293.1| translation initiation factor IF-3 [Propionibacterium acnes
HL050PA1]
gi|422551076|ref|ZP_16626871.1| translation initiation factor IF-3 [Propionibacterium acnes
HL005PA3]
gi|422555434|ref|ZP_16631202.1| translation initiation factor IF-3 [Propionibacterium acnes
HL005PA2]
gi|422557258|ref|ZP_16633003.1| translation initiation factor IF-3 [Propionibacterium acnes
HL025PA2]
gi|422560254|ref|ZP_16635944.1| translation initiation factor IF-3 [Propionibacterium acnes
HL005PA1]
gi|422563805|ref|ZP_16639477.1| translation initiation factor IF-3 [Propionibacterium acnes
HL046PA1]
gi|422565470|ref|ZP_16641119.1| translation initiation factor IF-3 [Propionibacterium acnes
HL082PA2]
gi|422566715|ref|ZP_16642343.1| translation initiation factor IF-3 [Propionibacterium acnes
HL002PA2]
gi|422571303|ref|ZP_16646896.1| translation initiation factor IF-3 [Propionibacterium acnes
HL067PA1]
gi|422579548|ref|ZP_16655070.1| translation initiation factor IF-3 [Propionibacterium acnes
HL005PA4]
gi|282582141|gb|EFB87523.1| translation initiation factor IF-3 [Propionibacterium acnes J139]
gi|289153242|gb|EFD01960.1| translation initiation factor IF-3 [Propionibacterium acnes SK187]
gi|289159023|gb|EFD07216.1| translation initiation factor IF-3 [Propionibacterium acnes J165]
gi|291376339|gb|ADE00194.1| translation initiation factor IF-3 [Propionibacterium acnes SK137]
gi|313763448|gb|EFS34812.1| translation initiation factor IF-3 [Propionibacterium acnes
HL013PA1]
gi|313773422|gb|EFS39388.1| translation initiation factor IF-3 [Propionibacterium acnes
HL074PA1]
gi|313793834|gb|EFS41863.1| translation initiation factor IF-3 [Propionibacterium acnes
HL110PA1]
gi|313801224|gb|EFS42482.1| translation initiation factor IF-3 [Propionibacterium acnes
HL110PA2]
gi|313811438|gb|EFS49152.1| translation initiation factor IF-3 [Propionibacterium acnes
HL083PA1]
gi|313813593|gb|EFS51307.1| translation initiation factor IF-3 [Propionibacterium acnes
HL025PA1]
gi|313816630|gb|EFS54344.1| translation initiation factor IF-3 [Propionibacterium acnes
HL059PA1]
gi|313819731|gb|EFS57445.1| translation initiation factor IF-3 [Propionibacterium acnes
HL046PA2]
gi|313822260|gb|EFS59974.1| translation initiation factor IF-3 [Propionibacterium acnes
HL036PA1]
gi|313823746|gb|EFS61460.1| translation initiation factor IF-3 [Propionibacterium acnes
HL036PA2]
gi|313826068|gb|EFS63782.1| translation initiation factor IF-3 [Propionibacterium acnes
HL063PA1]
gi|313829641|gb|EFS67355.1| translation initiation factor IF-3 [Propionibacterium acnes
HL063PA2]
gi|313831177|gb|EFS68891.1| translation initiation factor IF-3 [Propionibacterium acnes
HL007PA1]
gi|313834838|gb|EFS72552.1| translation initiation factor IF-3 [Propionibacterium acnes
HL056PA1]
gi|313840045|gb|EFS77759.1| translation initiation factor IF-3 [Propionibacterium acnes
HL086PA1]
gi|314914607|gb|EFS78438.1| translation initiation factor IF-3 [Propionibacterium acnes
HL005PA4]
gi|314919436|gb|EFS83267.1| translation initiation factor IF-3 [Propionibacterium acnes
HL050PA1]
gi|314920656|gb|EFS84487.1| translation initiation factor IF-3 [Propionibacterium acnes
HL050PA3]
gi|314924556|gb|EFS88387.1| translation initiation factor IF-3 [Propionibacterium acnes
HL036PA3]
gi|314930426|gb|EFS94257.1| translation initiation factor IF-3 [Propionibacterium acnes
HL067PA1]
gi|314954519|gb|EFS98925.1| translation initiation factor IF-3 [Propionibacterium acnes
HL027PA1]
gi|314957360|gb|EFT01463.1| translation initiation factor IF-3 [Propionibacterium acnes
HL002PA1]
gi|314962176|gb|EFT06277.1| translation initiation factor IF-3 [Propionibacterium acnes
HL002PA2]
gi|314963805|gb|EFT07905.1| translation initiation factor IF-3 [Propionibacterium acnes
HL082PA1]
gi|314966000|gb|EFT10099.1| translation initiation factor IF-3 [Propionibacterium acnes
HL082PA2]
gi|314968366|gb|EFT12465.1| translation initiation factor IF-3 [Propionibacterium acnes
HL037PA1]
gi|314974056|gb|EFT18152.1| translation initiation factor IF-3 [Propionibacterium acnes
HL053PA1]
gi|314976764|gb|EFT20859.1| translation initiation factor IF-3 [Propionibacterium acnes
HL045PA1]
gi|314978781|gb|EFT22875.1| translation initiation factor IF-3 [Propionibacterium acnes
HL072PA2]
gi|314981813|gb|EFT25906.1| translation initiation factor IF-3 [Propionibacterium acnes
HL110PA3]
gi|314984486|gb|EFT28578.1| translation initiation factor IF-3 [Propionibacterium acnes
HL005PA1]
gi|314986663|gb|EFT30755.1| translation initiation factor IF-3 [Propionibacterium acnes
HL005PA2]
gi|314990778|gb|EFT34869.1| translation initiation factor IF-3 [Propionibacterium acnes
HL005PA3]
gi|315079657|gb|EFT51647.1| translation initiation factor IF-3 [Propionibacterium acnes
HL053PA2]
gi|315081114|gb|EFT53090.1| translation initiation factor IF-3 [Propionibacterium acnes
HL078PA1]
gi|315083435|gb|EFT55411.1| translation initiation factor IF-3 [Propionibacterium acnes
HL027PA2]
gi|315087002|gb|EFT58978.1| translation initiation factor IF-3 [Propionibacterium acnes
HL002PA3]
gi|315089177|gb|EFT61153.1| translation initiation factor IF-3 [Propionibacterium acnes
HL072PA1]
gi|315090681|gb|EFT62657.1| translation initiation factor IF-3 [Propionibacterium acnes
HL110PA4]
gi|315094892|gb|EFT66868.1| translation initiation factor IF-3 [Propionibacterium acnes
HL060PA1]
gi|315095231|gb|EFT67207.1| translation initiation factor IF-3 [Propionibacterium acnes
HL038PA1]
gi|315099076|gb|EFT71052.1| translation initiation factor IF-3 [Propionibacterium acnes
HL059PA2]
gi|315100543|gb|EFT72519.1| translation initiation factor IF-3 [Propionibacterium acnes
HL046PA1]
gi|315104164|gb|EFT76140.1| translation initiation factor IF-3 [Propionibacterium acnes
HL050PA2]
gi|315106683|gb|EFT78659.1| translation initiation factor IF-3 [Propionibacterium acnes
HL030PA1]
gi|315108909|gb|EFT80885.1| translation initiation factor IF-3 [Propionibacterium acnes
HL030PA2]
gi|327329566|gb|EGE71325.1| translation initiation factor IF-3 [Propionibacterium acnes
HL096PA3]
gi|327329589|gb|EGE71347.1| translation initiation factor IF-3 [Propionibacterium acnes
HL096PA2]
gi|327333951|gb|EGE75667.1| translation initiation factor IF-3 [Propionibacterium acnes
HL097PA1]
gi|327444369|gb|EGE91023.1| translation initiation factor IF-3 [Propionibacterium acnes
HL043PA2]
gi|327444566|gb|EGE91220.1| translation initiation factor IF-3 [Propionibacterium acnes
HL043PA1]
gi|327446238|gb|EGE92892.1| translation initiation factor IF-3 [Propionibacterium acnes
HL013PA2]
gi|327452177|gb|EGE98831.1| translation initiation factor IF-3 [Propionibacterium acnes
HL092PA1]
gi|327452810|gb|EGE99464.1| translation initiation factor IF-3 [Propionibacterium acnes
HL087PA3]
gi|327457887|gb|EGF04542.1| translation initiation factor IF-3 [Propionibacterium acnes
HL083PA2]
gi|328752000|gb|EGF65616.1| translation initiation factor IF-3 [Propionibacterium acnes
HL020PA1]
gi|328755368|gb|EGF68984.1| translation initiation factor IF-3 [Propionibacterium acnes
HL087PA1]
gi|328757789|gb|EGF71405.1| translation initiation factor IF-3 [Propionibacterium acnes
HL025PA2]
gi|328760152|gb|EGF73729.1| translation initiation factor IF-3 [Propionibacterium acnes
HL099PA1]
gi|333766635|gb|EGL43924.1| translation initiation factor IF-3 [Propionibacterium sp. 409-HC1]
gi|333766701|gb|EGL43988.1| translation initiation factor IF-3 [Propionibacterium sp. 434-HC2]
gi|335277836|gb|AEH29741.1| translation initiation factor IF-3 [Propionibacterium acnes 6609]
gi|353454027|gb|AER04546.1| translation initiation factor IF-3 [Propionibacterium acnes ATCC
11828]
gi|365739787|gb|AEW83989.1| translation initiation factor IF-3 [Propionibacterium acnes TypeIA2
P.acn31]
gi|365742027|gb|AEW81721.1| translation initiation factor IF-3 [Propionibacterium acnes TypeIA2
P.acn17]
gi|365744279|gb|AEW79476.1| translation initiation factor IF-3 [Propionibacterium acnes TypeIA2
P.acn33]
gi|379978053|gb|EIA11378.1| translation initiation factor IF-3 [Propionibacterium acnes PRP-38]
gi|407904406|gb|AFU41236.1| translation initiation factor IF-3 [Propionibacterium acnes C1]
gi|456738537|gb|EMF63104.1| translation initiation factor IF-3 [Propionibacterium acnes
FZ1/2/0]
Length = 213
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE +K + + +++ AN + +KE+K+ ID HDY + +FLK GDKVK+ +
Sbjct: 48 GKFKYEAAQKAR-ESRRNQANSI-IKEMKLRPKIDDHDYETKKGHVLRFLKAGDKVKITI 105
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + + L+RR +D+ E A+ E+ ++ RN+ +IL P +
Sbjct: 106 MFRGREQSRPELGVNLLRRLADDLTEYATVESPPKQEGRNMLMILAPTR 154
>gi|350567517|ref|ZP_08935927.1| translation initiation factor IF-3 [Propionibacterium avidum ATCC
25577]
gi|348662588|gb|EGY79245.1| translation initiation factor IF-3 [Propionibacterium avidum ATCC
25577]
Length = 213
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE +K + + +++ AN + +KE+K+ ID HDY + +FLK GDKVK+ +
Sbjct: 48 GKFKYEAAQKAR-ESRRNQANSI-IKEMKLRPKIDDHDYETKKGHVLRFLKAGDKVKITI 105
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + + L+RR +D+ E A+ E+ ++ RN+ +IL P +
Sbjct: 106 MFRGREQSRPELGVNLLRRLADDLTEYATVESPPKQEGRNMLMILAPTR 154
>gi|357634057|ref|ZP_09131935.1| Translation initiation factor IF-3 [Desulfovibrio sp. FW1012B]
gi|357582611|gb|EHJ47944.1| Translation initiation factor IF-3 [Desulfovibrio sp. FW1012B]
Length = 180
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 69/118 (58%), Gaps = 6/118 (5%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
+++Y+QQKK + +KKS + LKE+K+ D+HDY +LK R+FL++GD+ KV V
Sbjct: 67 GRFKYQQQKKLQEARKKSTT--VLLKEIKVRPKTDEHDYQTKLKHIRRFLEEGDRCKVTV 124
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKALLQKAQEP 125
+GRE ++ + ++ R D+GE A E+ R + ++L P L++K P
Sbjct: 125 FFRGREIVHKDRGLIILHRVVADLGETAKVEQEPRTEGRMMTMLLAP---LVKKTPAP 179
>gi|422575273|ref|ZP_16650814.1| translation initiation factor IF-3 [Propionibacterium acnes
HL001PA1]
gi|314923958|gb|EFS87789.1| translation initiation factor IF-3 [Propionibacterium acnes
HL001PA1]
Length = 213
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE +K + + +++ AN + +KE+K+ ID HDY + +FLK GDKVK+ +
Sbjct: 48 GKFKYEAAQKAR-ESRRNQANSI-IKEMKLRPKIDDHDYETKKGHVLRFLKAGDKVKITI 105
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + + L+RR +D+ E A+ E+ ++ RN+ +IL P +
Sbjct: 106 MFRGREQSRPELGVNLLRRLADDLTEYATVESPPKQEGRNMLMILAPTR 154
>gi|374288720|ref|YP_005035805.1| translation initiation factor if-3 [Bacteriovorax marinus SJ]
gi|301167261|emb|CBW26843.1| translation initiation factor if-3 [Bacteriovorax marinus SJ]
Length = 198
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 64/116 (55%), Gaps = 4/116 (3%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++Y+QQKK +KK A ++ LKE++ NI+ HD +LK A KFL GDK+K+++
Sbjct: 73 GKFKYDQQKKANEAKKKQA--QVSLKEIQFRPNIEAHDLETKLKRAEKFLGQGDKIKMVM 130
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS--EENKNFRDRNIFIILVPNKALLQKA 122
+GRE ++++ + + V E+ S E I I+ P K LQK+
Sbjct: 131 QFRGREMAYKDLGLSKFKDILATVEEMGSQVESEPKMMGNRIITIVAPTKKALQKS 186
>gi|218296413|ref|ZP_03497156.1| translation initiation factor IF-3 [Thermus aquaticus Y51MC23]
gi|218243207|gb|EED09738.1| translation initiation factor IF-3 [Thermus aquaticus Y51MC23]
Length = 157
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SK+RYEQQ +K +KK A R ++K +K ID HDY +L ++FL++G KVKV +
Sbjct: 48 SKWRYEQQVAEKEARKK--AKRTEVKSIKFRVKIDDHDYQTKLNHIKRFLEEGHKVKVTI 105
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVPNK 116
+GRE + + L+ R D+ LA E K R++ ++L P K
Sbjct: 106 MFRGREMSYPELGQRLLERVAKDLEGLAVVEMKPELLGRDMNMLLAPAK 154
>gi|379730932|ref|YP_005323128.1| translation initiation factor IF-3 [Saprospira grandis str. Lewin]
gi|378576543|gb|AFC25544.1| translation initiation factor IF-3 [Saprospira grandis str. Lewin]
Length = 168
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 67/111 (60%), Gaps = 3/111 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K+ YE++K++K + K+ ++ +KE++ G N D HD+ +LK A+ FL+DG KVK
Sbjct: 56 LKKFLYERKKREK--ELKAKQVKVVIKEIRFGPNTDDHDFEFKLKHAKSFLEDGAKVKAY 113
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILVPNKA 117
V KGR F++ L++RF ++ EL+ ++ DR + + L P K+
Sbjct: 114 VQFKGRSIVFKDRGRTLLKRFVAELAELSVTDYPPKMEDRRMHVTLSPKKS 164
>gi|340352437|ref|ZP_08675312.1| translation initiation factor IF3 [Prevotella pallens ATCC 700821]
gi|339613964|gb|EGQ18677.1| translation initiation factor IF3 [Prevotella pallens ATCC 700821]
Length = 176
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 66/110 (60%), Gaps = 3/110 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SK+ Y+Q+K +K ++K + D+KE++ G D+HDY +LK A++FL +G+KV+ V
Sbjct: 66 SKFLYQQKKHQKEMKQKQV--KQDIKEIRFGPQTDEHDYQFKLKHAQEFLNEGNKVRAYV 123
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKA 117
+GR F+ L+ RF ND+ ELA E+ + +F+ L P K+
Sbjct: 124 FFRGRSILFKEQGEVLLLRFANDLEELAKVEQLPKLEGKKMFLYLSPKKS 173
>gi|374999688|ref|YP_004975776.1| translation initiation factor IF-3 [Azospirillum lipoferum 4B]
gi|357428659|emb|CBS91621.1| Translation initiation factor IF-3 [Azospirillum lipoferum 4B]
Length = 154
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 69/107 (64%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+E+QKK +KK ++LKE+K+ NID HDY V++++A +F+++GDKVK+ +
Sbjct: 49 GKFRFEEQKKANEARKKQKI--IELKEIKLRPNIDDHDYDVKMRSAIRFIEEGDKVKMTM 106
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE +++ + ++ R ++ + ++A E+ R + ++L P
Sbjct: 107 RFRGREMAHQDLGLNVLVRVRDQLQDIAKVEQMPRVEGRMMVMVLAP 153
>gi|288963151|ref|YP_003453430.1| translation initiation factor IF-3 [Azospirillum sp. B510]
gi|288915403|dbj|BAI76886.1| translation initiation factor IF-3 [Azospirillum sp. B510]
Length = 154
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 69/107 (64%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+E+QKK +KK ++LKE+K+ NID HDY V++++A +F+++GDKVK+ +
Sbjct: 49 GKFRFEEQKKANEARKKQKI--IELKEIKLRPNIDDHDYDVKMRSAIRFIEEGDKVKMTM 106
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE +++ + ++ R ++ + ++A E+ R + ++L P
Sbjct: 107 RFRGREMAHQDLGLNVLVRVRDQLQDIAKVEQMPRVEGRMMVMVLAP 153
>gi|365128473|ref|ZP_09340643.1| translation initiation factor IF-3 [Subdoligranulum sp.
4_3_54A2FAA]
gi|363622863|gb|EHL74008.1| translation initiation factor IF-3 [Subdoligranulum sp.
4_3_54A2FAA]
Length = 251
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 63/109 (57%), Gaps = 2/109 (1%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYR+E QK+ K +K +D+KE+++ NID +D++ ++ A+KFL GDKVKV +
Sbjct: 142 GKYRFEMQKRDKEAKKNQKI--VDIKEIRLSLNIDTNDFNTKVGQAKKFLSKGDKVKVSI 199
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRDRNIFIILVPNKA 117
+GRE ++ +E+ ++F + E E+ R++ + L P A
Sbjct: 200 RFRGREMAHTDLGLEVQKKFAAALPEAVVEKQPKLEGRSMQMFLAPAPA 248
>gi|303237190|ref|ZP_07323760.1| translation initiation factor IF-3 [Prevotella disiens FB035-09AN]
gi|302482577|gb|EFL45602.1| translation initiation factor IF-3 [Prevotella disiens FB035-09AN]
Length = 228
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 74/136 (54%), Gaps = 13/136 (9%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SK+ Y+Q+K +K ++K + ++KE++ G D+HDY +LK A++FL DG+KV+ V
Sbjct: 66 SKFLYQQKKHQKEMKQKQV--KQEIKEIRFGPQTDEHDYQFKLKHAQEFLNDGNKVRAYV 123
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKALLQK------ 121
+GR F+ L+ RF ND+ ELA E+ + +F+ L P K + K
Sbjct: 124 FFRGRSILFKEQGEVLLLRFANDLEELAKVEQLPKLEGKKMFLYLAPKKTGITKKSQQRR 183
Query: 122 ----AQEPPKKKDKQV 133
AQE K D +V
Sbjct: 184 DREEAQENAKNADTKV 199
>gi|256960039|ref|ZP_05564210.1| initiation factor 3 [Enterococcus faecalis Merz96]
gi|293383792|ref|ZP_06629699.1| translation initiation factor IF-3 [Enterococcus faecalis R712]
gi|293388732|ref|ZP_06633225.1| translation initiation factor IF-3 [Enterococcus faecalis S613]
gi|312906992|ref|ZP_07765988.1| translation initiation factor IF-3 [Enterococcus faecalis DAPTO
512]
gi|312978750|ref|ZP_07790477.1| translation initiation factor IF-3 [Enterococcus faecalis DAPTO
516]
gi|256950535|gb|EEU67167.1| initiation factor 3 [Enterococcus faecalis Merz96]
gi|291078868|gb|EFE16232.1| translation initiation factor IF-3 [Enterococcus faecalis R712]
gi|291081889|gb|EFE18852.1| translation initiation factor IF-3 [Enterococcus faecalis S613]
gi|310626977|gb|EFQ10260.1| translation initiation factor IF-3 [Enterococcus faecalis DAPTO
512]
gi|311288457|gb|EFQ67013.1| translation initiation factor IF-3 [Enterococcus faecalis DAPTO
516]
Length = 173
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 67/107 (62%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+EQQKK++ +KK +++KE+++ ID +D++ +L+ ARKFL+ GDKVK +
Sbjct: 65 GKFRFEQQKKEREARKKRKV--INVKEVRLSPTIDVNDFNTKLRNARKFLEKGDKVKASI 122
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I +++ R + ++A+ E K D R++F+ L P
Sbjct: 123 RFKGRAITHKEIGQKVLDRLAEETADIATVEQKAKMDGRSMFLTLAP 169
>gi|114765978|ref|ZP_01444992.1| translation initiation factor IF-3 [Pelagibaca bermudensis
HTCC2601]
gi|114541792|gb|EAU44830.1| translation initiation factor IF-3 [Roseovarius sp. HTCC2601]
Length = 136
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YEQQK++ +KK +++KE+K D HDY V+++ KFL+ GDKVK+ +
Sbjct: 29 GKFKYEQQKRESEARKKQKI--IEVKEVKFRPGTDIHDYDVKMRNVLKFLEKGDKVKITL 86
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVP 114
+GRE +N+ EL+ R DV EL EN R + +++ P
Sbjct: 87 RFRGREMAHQNLGRELLERVAEDVKELGKVENMPKMEGRQMIMMIGP 133
>gi|315498629|ref|YP_004087433.1| translation initiation factor if-3 [Asticcacaulis excentricus CB
48]
gi|315416641|gb|ADU13282.1| translation initiation factor IF-3 [Asticcacaulis excentricus CB
48]
Length = 173
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYR+++QKKK +KK +++KE+K+ NID+HDY V+ KA +F ++GDKVKV +
Sbjct: 68 GKYRFQEQKKKAEARKKQKV--VEIKEIKLRPNIDKHDYEVKAKAMTRFFEEGDKVKVTL 125
Query: 69 NLKGRENEFRNIAIELIRRFQNDV-GELASEENKNFRDRNIFIILVP 114
+GRE + ++L+ + + D E R + +IL P
Sbjct: 126 RFRGREMAHPELGMKLLNQVKADFEATTKVEYEPKMEGRQMIMILAP 172
>gi|328957060|ref|YP_004374446.1| translation initiation factor IF-3 [Carnobacterium sp. 17-4]
gi|328673384|gb|AEB29430.1| translation initiation factor IF-3 [Carnobacterium sp. 17-4]
Length = 173
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 67/107 (62%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+EQQKK++ +K + +KE+++ ID +D++ +L+ ARKFL+ GDKVK +
Sbjct: 65 GKFRFEQQKKEREARKNQKV--ISIKEVRLSPTIDLNDFNTKLRNARKFLEKGDKVKASI 122
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR ++I E++ R + ++++ E+ D R++F+IL P
Sbjct: 123 RFKGRAITHKSIGKEVLDRLAKETADISTIESAAKMDGRSMFLILAP 169
>gi|452751378|ref|ZP_21951124.1| Translation initiation factor 3 [alpha proteobacterium JLT2015]
gi|451961528|gb|EMD83938.1| Translation initiation factor 3 [alpha proteobacterium JLT2015]
Length = 145
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Query: 32 DLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQND 91
++KE+KM NID HDY V++K +F+ DGDKVKV + +GRE + + ++L+++ Q D
Sbjct: 56 EIKEIKMRPNIDDHDYGVKMKKVHEFIDDGDKVKVTLRFRGREMAHQQLGMQLLQKVQED 115
Query: 92 VGELAS-EENKNFRDRNIFIILVP 114
++A E + R + +++ P
Sbjct: 116 TKDVAKVEAHPKMEGRQMLMVIAP 139
>gi|84687222|ref|ZP_01015103.1| translation initiation factor [Maritimibacter alkaliphilus
HTCC2654]
gi|84664810|gb|EAQ11293.1| translation initiation factor [Maritimibacter alkaliphilus
HTCC2654]
Length = 164
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE QK++ +KK +++KE+K N D HDY V++K KFL+ GDKVKV +
Sbjct: 57 GKFKYETQKREAEARKKQKT--IEVKEVKFRPNTDVHDYDVKMKNVVKFLEKGDKVKVTL 114
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVP 114
+GRE +N+ +L+ R DV E+ EN R + +++ P
Sbjct: 115 RFRGREMAHQNLGRDLLERVAEDVKEIGKVENMPKMEGRQMIMMIGP 161
>gi|358463214|ref|ZP_09173294.1| translation initiation factor IF-3 [Frankia sp. CN3]
gi|357070590|gb|EHI80272.1| translation initiation factor IF-3 [Frankia sp. CN3]
Length = 149
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 61/110 (55%), Gaps = 3/110 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE +K++ +K +KE+K+ ID HDY + +FLK GDKVK+ +
Sbjct: 29 GKFKYESDQKRREARKNQVQTV--IKEMKLRPKIDPHDYETKKGHVVRFLKAGDKVKITI 86
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNKA 117
+GRE + I L++R DV EL E + +D RN+ +++ P+K
Sbjct: 87 MFRGREQSRPELGIRLLQRLSTDVAELGYVEAQPKQDGRNMTMVMAPHKG 136
>gi|304389319|ref|ZP_07371284.1| translation initiation factor IF3 [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
gi|315656577|ref|ZP_07909464.1| translation initiation factor IF3 [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
gi|304327437|gb|EFL94670.1| translation initiation factor IF3 [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
gi|315492532|gb|EFU82136.1| translation initiation factor IF3 [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
Length = 367
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 10 KYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVN 69
KY+YE +K + Q++ A+ + LKE+++G ID HDY V+ +FL GDKVK+++
Sbjct: 77 KYKYEAAQKARDQRRNQASTQ--LKEIRLGLKIDSHDYEVKKGHILRFLNGGDKVKIMIK 134
Query: 70 LKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + I+L+ R D+ + E+ +D R++ +++ P K
Sbjct: 135 FRGREQSRPEMGIKLLERLAEDIADDGVVESAPRQDGRSMTMVIGPVK 182
>gi|292670653|ref|ZP_06604079.1| translation initiation factor IF3 [Selenomonas noxia ATCC 43541]
gi|422344055|ref|ZP_16424982.1| translation initiation factor IF-3 [Selenomonas noxia F0398]
gi|292647680|gb|EFF65652.1| translation initiation factor IF3 [Selenomonas noxia ATCC 43541]
gi|355377803|gb|EHG25012.1| translation initiation factor IF-3 [Selenomonas noxia F0398]
Length = 188
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 67/105 (63%), Gaps = 3/105 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+RYEQQK++K +KK + +KE+K+ NID+HD++V+LK A +F+++G+KVKV +
Sbjct: 59 GKFRYEQQKREKEAKKKQKT--ISIKEVKLRPNIDEHDFNVKLKNALRFVEEGNKVKVTI 116
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIIL 112
+GRE + ++ R + +G+L + E +N+ +IL
Sbjct: 117 MFRGRELSHPELGRVVLDRVSDRLGDLVTVERGAKLEGKNMTMIL 161
>gi|410462642|ref|ZP_11316208.1| translation initiation factor IF-3 [Desulfovibrio magneticus str.
Maddingley MBC34]
gi|409984231|gb|EKO40554.1| translation initiation factor IF-3 [Desulfovibrio magneticus str.
Maddingley MBC34]
Length = 159
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
+++Y+QQKK + +KK A + LKE+K+ D+HDY +LK R+F+++GD+ KV V
Sbjct: 46 GRFKYQQQKKLQEARKK--ATTVQLKEIKVRPKTDEHDYQTKLKHIRRFIEEGDRCKVTV 103
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPN 115
+GRE ++ + ++ R D+GEL E+ R + ++L P
Sbjct: 104 FFRGREIVHKDRGLTILTRVVADLGELIKVEQEPRTEGRMMTMLLAPQ 151
>gi|154245880|ref|YP_001416838.1| translation initiation factor IF-3 [Xanthobacter autotrophicus Py2]
gi|238686715|sp|A7IGN8.1|IF3_XANP2 RecName: Full=Translation initiation factor IF-3
gi|154159965|gb|ABS67181.1| translation initiation factor IF-3 [Xanthobacter autotrophicus Py2]
Length = 174
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
+++Y+ QKK +KK +++KE+K+ ID HDY V++++ +F ++GDKVKV +
Sbjct: 69 GRFKYQNQKKASEARKKQKV--VEVKEIKLRPGIDTHDYEVKMRSMERFFEEGDKVKVTL 126
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE ++I +L+++ + DV +A E R + +IL P
Sbjct: 127 RFRGREMAHQDIGFKLLQKLKEDVAAIAKVEAEPMLEGRQMIMILSP 173
>gi|255973983|ref|ZP_05424569.1| initiation factor 3 [Enterococcus faecalis T2]
gi|255966855|gb|EET97477.1| initiation factor 3 [Enterococcus faecalis T2]
Length = 173
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+EQQKK++ +KK +++KE+++ ID +D++ +L+ ARKFL+ GDKVK +
Sbjct: 65 GKFRFEQQKKEREARKKQKV--INVKEVRLSPTIDVNDFNTKLRNARKFLEKGDKVKASI 122
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I ++ R + ++A+ E K D R++F+ L P
Sbjct: 123 RFKGRAITHKEIGQNVLDRLAEETADIATVEQKAKMDGRSMFLTLAP 169
>gi|317129890|ref|YP_004096172.1| translation initiation factor IF-3 [Bacillus cellulosilyticus DSM
2522]
gi|315474838|gb|ADU31441.1| translation initiation factor IF-3 [Bacillus cellulosilyticus DSM
2522]
Length = 166
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+RYEQQKK+K +K ++ KE+++ I++HD++ +L+ ARKFL GDKVK +
Sbjct: 58 GKFRYEQQKKEKEARKNQKI--INTKEVRLSPTIEEHDFNTKLRNARKFLTKGDKVKAAI 115
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVP 114
+GR I ++ + ++ ++A+ E K R++F+IL P
Sbjct: 116 RFRGRAITHSQIGKVVLEKLASECEDIATVEQKPKMEGRSMFLILSP 162
>gi|89101226|ref|ZP_01174052.1| translation initiation factor IF-3 [Bacillus sp. NRRL B-14911]
gi|89084055|gb|EAR63230.1| translation initiation factor IF-3 [Bacillus sp. NRRL B-14911]
Length = 146
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+++EQQKK+K +K +++KE+++ ID+HD++ +L+ A KFL+ GDKVK +
Sbjct: 38 GKFKFEQQKKEKEARKNQKI--INIKEVRLSPTIDEHDFNTKLRNAIKFLEKGDKVKASI 95
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I ++ RF E+A+ E+ D R++F++L P
Sbjct: 96 RFKGRAITHKEIGQRVLVRFAEACKEVAAVESHPKMDGRSMFMVLAP 142
>gi|298346970|ref|YP_003719657.1| translation initiation factor IF-3 [Mobiluncus curtisii ATCC 43063]
gi|298237031|gb|ADI68163.1| translation initiation factor IF-3 [Mobiluncus curtisii ATCC 43063]
Length = 367
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 10 KYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVN 69
KY+YE +K + Q++ A+ + LKE+++G ID HDY V+ +FL GDKVK+++
Sbjct: 77 KYKYEAAQKARDQRRNQASTQ--LKEIRLGLKIDSHDYEVKKGHILRFLNGGDKVKIMIK 134
Query: 70 LKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + I+L+ R D+ + E+ +D R++ +++ P K
Sbjct: 135 FRGREQSRPEMGIKLLERLAEDIADDGVVESAPRQDGRSMTMVIGPVK 182
>gi|315655516|ref|ZP_07908415.1| translation initiation factor IF3 [Mobiluncus curtisii ATCC 51333]
gi|315490171|gb|EFU79797.1| translation initiation factor IF3 [Mobiluncus curtisii ATCC 51333]
Length = 367
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 10 KYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVN 69
KY+YE +K + Q++ A+ + LKE+++G ID HDY V+ +FL GDKVK+++
Sbjct: 77 KYKYEAAQKARDQRRNQASTQ--LKEIRLGLKIDSHDYEVKKGHILRFLNGGDKVKIMIK 134
Query: 70 LKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + I+L+ R D+ + E+ +D R++ +++ P K
Sbjct: 135 FRGREQSRPEMGIKLLERLAEDIADDGVVESAPRQDGRSMTMVIGPVK 182
>gi|227530472|ref|ZP_03960521.1| translation initiation factor IF3 [Lactobacillus vaginalis ATCC
49540]
gi|227349577|gb|EEJ39868.1| translation initiation factor IF3 [Lactobacillus vaginalis ATCC
49540]
Length = 170
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYRYE QKK++ +KK + +KE+++ +ID +D++V+LK RKF++ GDKV+V +
Sbjct: 59 GKYRYEMQKKEREARKKQKT--VTVKEIRLSPSIDTNDFNVKLKRVRKFIEKGDKVRVSL 116
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GR ++I ++I R + ++A+ + R+IF+ L P
Sbjct: 117 RFRGRAITHKDIGRDMIERMAKETEDIATVVQRPKMEGRSIFLTLAP 163
>gi|294673347|ref|YP_003573963.1| translation initiation factor IF-3 [Prevotella ruminicola 23]
gi|294472015|gb|ADE81404.1| translation initiation factor IF-3 [Prevotella ruminicola 23]
Length = 235
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 67/110 (60%), Gaps = 3/110 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SK+ Y+Q+K++K + K ++++KE++ G D+HDY +LK AR+FL++G+KV+ V
Sbjct: 66 SKFLYQQKKRQKEMKAKQV--KVEVKEIRFGPQTDEHDYQFKLKHAREFLEEGNKVRAYV 123
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVPNKA 117
+GR F+ L+ RF ND+ E+ E + + +F+ L P KA
Sbjct: 124 FFRGRSILFKEQGEVLLLRFANDLEEVGKVEGMPSLEGKKMFLYLAPKKA 173
>gi|409399745|ref|ZP_11249994.1| translation initiation factor IF-3 [Acidocella sp. MX-AZ02]
gi|409131134|gb|EKN00851.1| translation initiation factor IF-3 [Acidocella sp. MX-AZ02]
Length = 144
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YEQQKK+ +KK +++KE+K+ NID +DY V+L A ++F+ +GDKVKV +
Sbjct: 39 GKFKYEQQKKRNEARKKQKV--VEIKEVKVRPNIDDNDYMVKLNAMKRFIGEGDKVKVTL 96
Query: 69 NLKGRENEFRNIAIELIRRFQNDVG-ELASEENKNFRDRNIFIILVP 114
+GRE + + ++++ R + D+ E E+ R + ++L P
Sbjct: 97 RFRGREMAHQELGVKVLERIRGDMEVETKVEQMPKLEMRQMVMVLAP 143
>gi|239905698|ref|YP_002952437.1| translation initiation factor IF-3 [Desulfovibrio magneticus RS-1]
gi|239795562|dbj|BAH74551.1| translation initiation factor IF-3 [Desulfovibrio magneticus RS-1]
Length = 185
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
+++Y+QQKK + +KK A + LKE+K+ D+HDY +LK R+F+++GD+ KV V
Sbjct: 72 GRFKYQQQKKLQEARKK--ATTVQLKEIKVRPKTDEHDYQTKLKHIRRFIEEGDRCKVTV 129
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPN 115
+GRE ++ + ++ R D+GEL E+ R + ++L P
Sbjct: 130 FFRGREIVHKDRGLTILTRVVADLGELIKVEQEPRTEGRMMTMLLAPQ 177
>gi|254465435|ref|ZP_05078846.1| translation initiation factor IF-3 [Rhodobacterales bacterium Y4I]
gi|206686343|gb|EDZ46825.1| translation initiation factor IF-3 [Rhodobacterales bacterium Y4I]
Length = 137
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
K++YEQQK++ +KK +++KE+K N D HDY V+++ KFL++GDKVK+
Sbjct: 28 FGKFKYEQQKRESEARKKQKI--IEVKEVKFRPNTDTHDYEVKMRNVFKFLENGDKVKIT 85
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVP 114
+ +GRE +N+ EL+ R D ++ EN R + +++ P
Sbjct: 86 LRFRGREMAHQNLGRELLERVAEDTKDIGKVENMPKMEGRQMIMMIGP 133
>gi|40062535|gb|AAR37480.1| translation initiation factor IF-3 [uncultured marine bacterium
106]
Length = 130
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++Y+Q K+ ++ + LKE+KM I++HD+ +L+ A +FL+DGDKVKV V
Sbjct: 21 GKFKYQQSKQNHVARQNQKV--VHLKEVKMKPKIEKHDFQFKLRNALRFLEDGDKVKVGV 78
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNK 116
GR+ +++ +EL+ +FQ ++G+ + E+ + R++ +IL P K
Sbjct: 79 RFMGRQIAHKDLGVELLEKFQAEIGDDGTVEQPISSEGRSMHMILAPPK 127
>gi|372280789|ref|ZP_09516825.1| translation initiation factor IF-3 [Oceanicola sp. S124]
Length = 194
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YEQQK++ +KK +++KE+K D HDY V+++ KFL+ GDKVKV +
Sbjct: 87 GKFKYEQQKRESEARKKQKI--IEVKEVKFRPGTDVHDYDVKMRNVIKFLEHGDKVKVTL 144
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVP 114
+GRE +N+ EL+ R DV E+ EN R + +++ P
Sbjct: 145 RFRGREMAHQNLGRELLERVAEDVKEIGKVENMPKMEGRQMVMMIGP 191
>gi|332187437|ref|ZP_08389175.1| translation initiation factor IF-3 [Sphingomonas sp. S17]
gi|332012598|gb|EGI54665.1| translation initiation factor IF-3 [Sphingomonas sp. S17]
Length = 172
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 60/111 (54%), Gaps = 3/111 (2%)
Query: 5 YFFLSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKV 64
+ + KY+YE QKK +K ++KE+KM NID HDY ++K +F+ +GDKV
Sbjct: 63 FLDVGKYKYEAQKKANLARKSQKTQ--EIKEIKMRPNIDDHDYDTKMKKVVEFIGEGDKV 120
Query: 65 KVIVNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
KV + +GRE + + +++R V E+A E R + ++L P
Sbjct: 121 KVTMRFRGRELSHGQLGMNVLQRVAEQVAEVAKVEAYPRMEGRQMLMVLAP 171
>gi|357032053|ref|ZP_09093993.1| protein translation initiation factor 3 [Gluconobacter morbifer
G707]
gi|356414280|gb|EHH67927.1| protein translation initiation factor 3 [Gluconobacter morbifer
G707]
Length = 173
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YEQQKKK +KK +++KE+K+ +HD+ +LKA FL +GDKVKV +
Sbjct: 68 GKFKYEQQKKKNEARKKQKV--IEIKEVKVRPGTGEHDFQTKLKAINTFLDEGDKVKVSL 125
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
KGRE + + I ++ R + +V E A E+ +R + ++L P
Sbjct: 126 RFKGREMAHQELGIRMMERIRIEVEEKAKVEQMPRLENRQMLMVLAP 172
>gi|352516400|ref|YP_004885717.1| translation initiation factor IF-3 [Tetragenococcus halophilus NBRC
12172]
gi|348600507|dbj|BAK93553.1| translation initiation factor IF-3 [Tetragenococcus halophilus NBRC
12172]
Length = 175
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 67/107 (62%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYR+EQQKK + +KK +++KE+++ ID++D++ +L+ ARKFL+ GDKVK +
Sbjct: 65 GKYRFEQQKKAREARKKQKV--INVKEVRLSPAIDENDFNTKLRNARKFLQKGDKVKASI 122
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I E++ R + ++A+ E K D R++ ++L P
Sbjct: 123 RFKGRAITHKEIGQEVLDRLAQETEDVATVEQKAKMDGRSMNLMLAP 169
>gi|163790750|ref|ZP_02185176.1| translation initiation factor IF-3 [Carnobacterium sp. AT7]
gi|159873930|gb|EDP68008.1| translation initiation factor IF-3 [Carnobacterium sp. AT7]
Length = 173
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+EQQKK++ +K + +KE+++ ID +D++ +L+ ARKFL+ GDKVK +
Sbjct: 65 GKFRFEQQKKEREARKNQKV--ISIKEVRLSPTIDLNDFNTKLRNARKFLEKGDKVKASI 122
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I E++ R + ++++ E+ D R++F+IL P
Sbjct: 123 RFKGRAITHKGIGKEVLDRLAKETADISTIESAAKMDGRSMFLILAP 169
>gi|366164699|ref|ZP_09464454.1| translation initiation factor 3 [Acetivibrio cellulolyticus CD2]
Length = 164
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY +E KK+K +K + +KE+++ +I++HD+ ++K A KFLKDGDKVKV V
Sbjct: 58 GKYIFELNKKEKEARKNQKV--VSIKEVRLSASIEEHDFEFKVKNAVKFLKDGDKVKVSV 115
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVP 114
+GRE + + +++++F V E+ + E K RN+ +IL P
Sbjct: 116 KFRGREMNYTALGEQVLQKFAESVQEVGTVEKKPKLEGRNMLMILNP 162
>gi|404328586|ref|ZP_10969034.1| translation initiation factor IF-3 [Sporolactobacillus vineae DSM
21990 = SL153]
Length = 167
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYR+EQQKK + +K + +KE+++ +I++HD++ +++ ARKFL+ GDKVKV V
Sbjct: 59 GKYRFEQQKKDREARKNQKV--ISIKEIRLSPSIEEHDFNTKMRNARKFLEKGDKVKVSV 116
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILVP 114
+GR ++ +++ + + E++ E R++F++L P
Sbjct: 117 RFRGRAITHSDLGRQVLEKLARECAEVSVVEARPKMEGRSMFLVLAP 163
>gi|332670156|ref|YP_004453164.1| translation initiation factor IF-3 [Cellulomonas fimi ATCC 484]
gi|332339194|gb|AEE45777.1| translation initiation factor IF-3 [Cellulomonas fimi ATCC 484]
Length = 309
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE K + + +++ N + LKE++ ID HDY + +FLK GDKVKV++
Sbjct: 33 GKFKYEADMKAR-EARRNQTNTV-LKEIRFRLKIDPHDYGTKKGHVERFLKAGDKVKVMI 90
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + I L++R +DV EL E+ +D RN+ ++L P K
Sbjct: 91 MFRGREQSRPEMGIRLLQRLADDVAELGFVESSPKQDGRNMIMVLGPTK 139
>gi|134299470|ref|YP_001112966.1| translation initiation factor IF-3 [Desulfotomaculum reducens MI-1]
gi|134052170|gb|ABO50141.1| bacterial translation initiation factor 3 (bIF-3) [Desulfotomaculum
reducens MI-1]
Length = 145
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YEQ K++K +K+ + +KE+K+ I+ HDYS + K A +FLKDGDKVKV +
Sbjct: 35 GKFKYEQSKREKEAKKRQRI--IQVKEVKLRPRIEDHDYSTKSKNAERFLKDGDKVKVTI 92
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILVP 114
+GRE + L+ R D+ ++ E + +N+ +IL P
Sbjct: 93 MFRGREIVHTELGRALLERLAQDLKDICIVERHPKLEGKNMIMILAP 139
>gi|189461813|ref|ZP_03010598.1| hypothetical protein BACCOP_02479 [Bacteroides coprocola DSM 17136]
gi|189431407|gb|EDV00392.1| translation initiation factor IF-3 [Bacteroides coprocola DSM
17136]
Length = 191
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 66/114 (57%), Gaps = 3/114 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SK+ Y Q KK+ +++K+ ++++KE++ G D+HDY+ +LK A FL+DGDKVK V
Sbjct: 67 SKFLY--QLKKRAKEQKAKQVKVNVKEIRFGPQTDEHDYNFKLKHAIGFLQDGDKVKAYV 124
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKALLQK 121
KGR F+ L+ RF ND+ E A E+ + + I L P KA K
Sbjct: 125 FFKGRSILFKEQGEVLLLRFANDLEEYAKVEQMPLLEGKRMTISLSPKKATAPK 178
>gi|325919877|ref|ZP_08181867.1| bacterial translation initiation factor 3 (bIF-3) [Xanthomonas
gardneri ATCC 19865]
gi|325549661|gb|EGD20525.1| bacterial translation initiation factor 3 (bIF-3) [Xanthomonas
gardneri ATCC 19865]
Length = 147
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 66/111 (59%), Gaps = 3/111 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+++EQQKK +KK+ ++++KELK D+ DY ++L+ R+FL++GDKVKV +
Sbjct: 39 GKFKFEQQKKANEAKKKT--KQVEIKELKFRPVTDEGDYQIKLRNMRRFLEEGDKVKVNI 96
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGE-LASEENKNFRDRNIFIILVPNKAL 118
+GRE + + E+ R + D+GE + E R + +++ P K +
Sbjct: 97 RFRGREMSHQELGREMASRIEADLGEDIVIESRPRLEGRQMVMMIAPKKKI 147
>gi|338737217|ref|YP_004674179.1| translation initiation factor IF-3 [Hyphomicrobium sp. MC1]
gi|337757780|emb|CCB63603.1| translation initiation factor IF-3 [Hyphomicrobium sp. MC1]
Length = 176
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
K+++++QKK +K ++LKE+KM ID HDY V+++A ++F +DGDKVK+
Sbjct: 70 FGKFKFQEQKKAAEARKNQKI--VELKEIKMRPGIDDHDYDVKMRAIKRFFEDGDKVKIT 127
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE + + +++R + D ++ E F R + ++L P
Sbjct: 128 LRFRGREMAHSQLGMAVLQRVKADTEAISKVESEPRFEGRQMVMVLAP 175
>gi|259503613|ref|ZP_05746515.1| initiation factor IF3 [Lactobacillus antri DSM 16041]
gi|312868767|ref|ZP_07728959.1| translation initiation factor IF-3 [Lactobacillus oris PB013-T2-3]
gi|417885665|ref|ZP_12529817.1| translation initiation factor IF-3 [Lactobacillus oris F0423]
gi|259168437|gb|EEW52932.1| initiation factor IF3 [Lactobacillus antri DSM 16041]
gi|311095753|gb|EFQ54005.1| translation initiation factor IF-3 [Lactobacillus oris PB013-T2-3]
gi|341595161|gb|EGS37836.1| translation initiation factor IF-3 [Lactobacillus oris F0423]
Length = 170
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYR+E QKK++ +KK + +KE+++ +ID +D++V+LK RKF++ GDKV+V +
Sbjct: 59 GKYRFEMQKKEREARKKQKT--VTVKEIRLSPSIDTNDFNVKLKRVRKFIEKGDKVRVSL 116
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GR ++I ++I R + ++A+ + R+IF+ L P
Sbjct: 117 RFRGRAITHKDIGRDMIERMAEETSDIATVVQRPKMEGRSIFLTLAP 163
>gi|221638348|ref|YP_002524610.1| translation initiation factor IF-3 [Rhodobacter sphaeroides KD131]
gi|332560369|ref|ZP_08414691.1| translation initiation factor IF-3 [Rhodobacter sphaeroides WS8N]
gi|429207931|ref|ZP_19199187.1| Translation initiation factor 3 [Rhodobacter sp. AKP1]
gi|221159129|gb|ACM00109.1| Translation initiation factor IF-3 [Rhodobacter sphaeroides KD131]
gi|332278081|gb|EGJ23396.1| translation initiation factor IF-3 [Rhodobacter sphaeroides WS8N]
gi|428189324|gb|EKX57880.1| Translation initiation factor 3 [Rhodobacter sp. AKP1]
Length = 136
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YEQQK++ +KK + +++KE+K D HDY V++++ KFL +GDKVKV +
Sbjct: 29 GKFKYEQQKREAEARKKQ--HIIEIKEIKFRPGTDTHDYDVKMRSVLKFLSEGDKVKVTL 86
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS---EENKNFRDRNIFIILVP 114
+GRE + + +EL+ R V E + E R + +++ P
Sbjct: 87 RFRGREMAHQELGLELLNRVAAHVSEAEAGKVEAMPKLEGRQMVMMIAP 135
>gi|85702892|ref|ZP_01033996.1| translation initiation factor [Roseovarius sp. 217]
gi|85671820|gb|EAQ26677.1| translation initiation factor [Roseovarius sp. 217]
Length = 219
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YEQQK++ +KK +++KE+K D HDY V++++ KFL+ GDKVK+ +
Sbjct: 112 GKYKYEQQKREAEARKKQKV--IEVKEIKFRPGTDTHDYDVKMRSVVKFLQGGDKVKITL 169
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVPN 115
+GRE +++ +L+ R D+ ++ EN R + +++ P
Sbjct: 170 RFRGREMAHQDLGRQLLERIAEDIKDVGRIENMPKMEGRQMIMVIGPG 217
>gi|427412556|ref|ZP_18902748.1| translation initiation factor IF-3 [Veillonella ratti
ACS-216-V-Col6b]
gi|425716363|gb|EKU79347.1| translation initiation factor IF-3 [Veillonella ratti
ACS-216-V-Col6b]
Length = 173
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 63/106 (59%), Gaps = 3/106 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYRYEQQK++K +KK LKE+K+ +I+ HD+ V++K A KFL +G+KVKV +
Sbjct: 67 GKYRYEQQKREKEAKKKQKT--FTLKEVKLRPHIEDHDFYVKMKNASKFLAEGNKVKVTI 124
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILV 113
+GRE + ++ RF ++ E A E+ RN+ +IL
Sbjct: 125 MFRGRELSHPELGQNVLTRFAKELEEQAVVEKAAKLEGRNMTMILA 170
>gi|336179141|ref|YP_004584516.1| translation initiation factor IF-3 [Frankia symbiont of Datisca
glomerata]
gi|334860121|gb|AEH10595.1| Translation initiation factor IF-3 [Frankia symbiont of Datisca
glomerata]
Length = 214
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 68/119 (57%), Gaps = 4/119 (3%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE +K++ +K + +KE+K+ ID HDY + +FL+ GDKVK+ +
Sbjct: 94 GKFKYESDQKRREARKNQV--QTVIKEMKLRPKIDPHDYETKKGHVVRFLRAGDKVKITI 151
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK-ALLQKAQEP 125
+GRE + I L++R DV +L E + +D RN+ +++ P+K + Q+A EP
Sbjct: 152 MFRGREQSRPELGIRLLQRLSTDVADLGYVEAQPKQDGRNMTMVMAPHKGSRPQRAPEP 210
>gi|410944365|ref|ZP_11376106.1| translation initiation factor IF-3 [Gluconobacter frateurii NBRC
101659]
Length = 173
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YEQQKKK +KK +++KE+K+ +HD+ +LKA FL DGDKVKV +
Sbjct: 68 GKFKYEQQKKKNEARKKQKV--IEIKEVKVRPGTGEHDFQTKLKAINSFLDDGDKVKVSL 125
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
KGRE + + +++ R + +V E A E+ +R + +++ P
Sbjct: 126 RFKGREMAHQELGAKMMERIRAEVEEKAKVEQMPRMENRQMLMVIAP 172
>gi|365925273|ref|ZP_09448036.1| translation initiation factor IF-3 [Lactobacillus mali KCTC 3596 =
DSM 20444]
gi|420266504|ref|ZP_14768967.1| translation initiation factor IF-3 [Lactobacillus mali KCTC 3596 =
DSM 20444]
gi|394425273|gb|EJE98269.1| translation initiation factor IF-3 [Lactobacillus mali KCTC 3596 =
DSM 20444]
Length = 166
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYR+E QKK++ +K +++KE+++ ID +D++ +L A KFL GDKVKV +
Sbjct: 58 GKYRFELQKKQREARKNQKV--INVKEVRLSPTIDTNDFNTKLNNALKFLGKGDKVKVSI 115
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I +++ RF V E+A+ E++ D R++F++L P
Sbjct: 116 RFKGRAITHKEIGYDVLNRFAKAVEEVATVESRAKMDGRSMFMMLAP 162
>gi|21231897|ref|NP_637814.1| translation initiation factor IF-3 [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66767975|ref|YP_242737.1| translation initiation factor IF-3 [Xanthomonas campestris pv.
campestris str. 8004]
gi|188991101|ref|YP_001903111.1| translation initiation factor IF-3 [Xanthomonas campestris pv.
campestris str. B100]
gi|21113621|gb|AAM41738.1| initiation factor IF-3 [Xanthomonas campestris pv. campestris str.
ATCC 33913]
gi|66573307|gb|AAY48717.1| translation initiation factor IF-3 [Xanthomonas campestris pv.
campestris str. 8004]
gi|167732861|emb|CAP51055.1| Initiation factor IF-3 [Xanthomonas campestris pv. campestris]
Length = 159
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 66/111 (59%), Gaps = 3/111 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+++EQQKK +KK+ ++++KELK D+ DY ++L+ R+FL++GDKVKV +
Sbjct: 51 GKFKFEQQKKANEAKKKT--KQVEIKELKFRPVTDEGDYQIKLRNMRRFLEEGDKVKVNI 108
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGE-LASEENKNFRDRNIFIILVPNKAL 118
+GRE + + E+ R + D+GE + E R + +++ P K +
Sbjct: 109 RFRGREMSHQELGREMAARIEADLGEDIVIESRPRLEGRQMVMMIAPKKKI 159
>gi|58582809|ref|YP_201825.1| translation initiation factor IF-3 [Xanthomonas oryzae pv. oryzae
KACC 10331]
gi|84624683|ref|YP_452055.1| translation initiation factor IF-3 [Xanthomonas oryzae pv. oryzae
MAFF 311018]
gi|188577598|ref|YP_001914527.1| translation initiation factor IF-3 [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|384418826|ref|YP_005628186.1| translation initiation factor IF-3 [Xanthomonas oryzae pv.
oryzicola BLS256]
gi|58427403|gb|AAW76440.1| initiation factor IF-3 [Xanthomonas oryzae pv. oryzae KACC 10331]
gi|84368623|dbj|BAE69781.1| initiation factor IF-3 [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|188522050|gb|ACD59995.1| translation initiation factor IF-3 [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|353461739|gb|AEQ96018.1| translation initiation factor IF-3 [Xanthomonas oryzae pv.
oryzicola BLS256]
Length = 159
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 66/111 (59%), Gaps = 3/111 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+++EQQKK +KK+ ++++KELK D+ DY ++L+ R+FL++GDKVKV +
Sbjct: 51 GKFKFEQQKKANEAKKKT--KQVEIKELKFRPVTDEGDYQIKLRNMRRFLEEGDKVKVNI 108
Query: 69 NLKGRENEFRNIAIELIRRFQNDVG-ELASEENKNFRDRNIFIILVPNKAL 118
+GRE + + E+ R + D+G E+ E R + +++ P K +
Sbjct: 109 RFRGREMSHQELGREMAARIEADLGDEIVIESRPRLEGRQMVMMIAPKKKI 159
>gi|222151592|ref|YP_002560748.1| translation initiation factor IF-3 [Macrococcus caseolyticus
JCSC5402]
gi|254803489|sp|B9E784.1|IF3_MACCJ RecName: Full=Translation initiation factor IF-3
gi|222120717|dbj|BAH18052.1| translation initiation factor IF-3 [Macrococcus caseolyticus
JCSC5402]
Length = 178
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+++EQQKK+K +KK + +KE+++ I+ HD++ +LK ARKFL+ DKVKV +
Sbjct: 67 GKFKFEQQKKEKEARKKQKV--VTVKEIRLSPTIEDHDFNTKLKNARKFLEKEDKVKVSI 124
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
+GR + ++ +F + +LA+ E K D R++F++L P
Sbjct: 125 RFRGRAITHKEFGQRVLEKFAEECKDLATVEQKPKMDGRSMFLMLAP 171
>gi|386394286|ref|ZP_10079067.1| translation initiation factor IF-3 [Desulfovibrio sp. U5L]
gi|385735164|gb|EIG55362.1| translation initiation factor IF-3 [Desulfovibrio sp. U5L]
Length = 159
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
+++Y+QQKK + +KKS + LKE+K+ D+HDY +LK R+FL++GD+ KV V
Sbjct: 46 GRFKYQQQKKLQEARKKSTT--VLLKEIKVRPKTDEHDYQTKLKHIRRFLEEGDRCKVTV 103
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE ++ + ++ R D+GE A E+ R + ++L P
Sbjct: 104 FFRGREIVHKDRGLIILHRVVADLGETAKVEQEPRTEGRMMTMLLAP 150
>gi|383807204|ref|ZP_09962765.1| translation initiation factor IF-3 [Candidatus Aquiluna sp.
IMCC13023]
gi|383299634|gb|EIC92248.1| translation initiation factor IF-3 [Candidatus Aquiluna sp.
IMCC13023]
Length = 179
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE +K + + +K+ N + LK ++ G ID HDY + RKFLK GDKVKV+V
Sbjct: 51 GKFKYEAAQKVR-EARKNQVNTV-LKTVRFGLKIDSHDYETKAGQVRKFLKAGDKVKVMV 108
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNK 116
+GRE + ++L+R + V E + E N + R++ +++ P K
Sbjct: 109 VFRGREQSRPEMGVKLLRNLADQVTEFGTVESNPSIDGRSMVMVIGPLK 157
>gi|184201213|ref|YP_001855420.1| translation initiation factor IF-3 [Kocuria rhizophila DC2201]
gi|183581443|dbj|BAG29914.1| translation initiation factor IF-3 [Kocuria rhizophila DC2201]
Length = 314
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 64/111 (57%), Gaps = 5/111 (4%)
Query: 10 KYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVN 69
KY+YE K + + +K+ AN + LKE++ ID HDY ++ A++FL GDKVK ++
Sbjct: 63 KYKYEAAVKAR-ESRKNQANTV-LKEVRFRLKIDTHDYETKVGHAKRFLSAGDKVKAMIQ 120
Query: 70 LKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP--NKA 117
+GRE + + + L+ R DV E+ E D RN+ +++ P NKA
Sbjct: 121 FRGREQQRPAMGVRLLERLAEDVAEVGVVETAPRVDGRNMVMVIGPLKNKA 171
>gi|374709108|ref|ZP_09713542.1| translation initiation factor IF-3 [Sporolactobacillus inulinus
CASD]
Length = 167
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYR+EQQKK++ +K ++LKE+++ +I++HD++ +++ A+KFL+ GDKVK V
Sbjct: 59 GKYRFEQQKKEREARKNQKV--INLKEIRLSPSIEEHDFNTKMRNAKKFLQKGDKVKASV 116
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GR N+ +++ + + +++ E R++F++L P
Sbjct: 117 RFRGRAITHSNLGRQVLEKLAEECADISVIEARPKMEGRSMFLVLAP 163
>gi|335038730|ref|ZP_08531943.1| Translation initiation factor IF-3 [Caldalkalibacillus thermarum
TA2.A1]
gi|334181370|gb|EGL83922.1| Translation initiation factor IF-3 [Caldalkalibacillus thermarum
TA2.A1]
Length = 208
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+++EQQK+++ +KK +++KE++ NI++HDY+ +++ ++FL GDKVK +
Sbjct: 100 GKFKFEQQKREREARKKQKV--INVKEVRFTPNIEEHDYNTKMRNVQRFLSKGDKVKCTI 157
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
+GR+ + EL+ R DV E+ E K D R++ + L P
Sbjct: 158 RFRGRQITHAELGRELLERLAQDVAEVGVVEKKPSMDGRSMIMFLAP 204
>gi|384428404|ref|YP_005637764.1| translation initiation factor IF-3 [Xanthomonas campestris pv.
raphani 756C]
gi|341937507|gb|AEL07646.1| translation initiation factor IF-3 [Xanthomonas campestris pv.
raphani 756C]
Length = 147
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 66/111 (59%), Gaps = 3/111 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+++EQQKK +KK+ ++++KELK D+ DY ++L+ R+FL++GDKVKV +
Sbjct: 39 GKFKFEQQKKANEAKKKT--KQVEIKELKFRPVTDEGDYQIKLRNMRRFLEEGDKVKVNI 96
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGE-LASEENKNFRDRNIFIILVPNKAL 118
+GRE + + E+ R + D+GE + E R + +++ P K +
Sbjct: 97 RFRGREMSHQELGREMAARIEADLGEDIVIESRPRLEGRQMVMMIAPKKKI 147
>gi|332686210|ref|YP_004455984.1| translation initiation factor 3 [Melissococcus plutonius ATCC
35311]
gi|379727751|ref|YP_005319936.1| translation initiation factor 3 [Melissococcus plutonius DAT561]
gi|332370219|dbj|BAK21175.1| translation initiation factor 3 [Melissococcus plutonius ATCC
35311]
gi|376318654|dbj|BAL62441.1| translation initiation factor 3 [Melissococcus plutonius DAT561]
Length = 173
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+ +EQQKK++ +KK +++KE+++ ID +D++ +L+ ARKFL+ GDKVK +
Sbjct: 65 GKFHFEQQKKEREARKKQKV--INVKEVRLSPTIDLNDFNTKLRNARKFLEKGDKVKASI 122
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I E++ R + ++A+ E K D R++F+ L P
Sbjct: 123 RFKGRAITHKEIGQEVLDRLAKETADIATVEQKAKMDGRSMFLTLSP 169
>gi|373116563|ref|ZP_09530716.1| translation initiation factor IF-3 [Lachnospiraceae bacterium
7_1_58FAA]
gi|371669441|gb|EHO34543.1| translation initiation factor IF-3 [Lachnospiraceae bacterium
7_1_58FAA]
Length = 210
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 70/110 (63%), Gaps = 3/110 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY++EQ K++K +K + +++KE++M +ID +D++V+L+ A+KFL +G++VKV V
Sbjct: 97 GKYKFEQTKREKEARKNQ--HVVEIKEVRMSPSIDVNDFNVKLRNAQKFLAEGNRVKVTV 154
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKA 117
+GRE +I L+ +F GE+A+ +++ R++ I L P A
Sbjct: 155 RFRGREMAHTDIGKGLLLKFAEQCGEVATLDKDPKLDGRHMSIFLSPKVA 204
>gi|325917698|ref|ZP_08179889.1| bacterial translation initiation factor 3 (bIF-3) [Xanthomonas
vesicatoria ATCC 35937]
gi|325536092|gb|EGD07897.1| bacterial translation initiation factor 3 (bIF-3) [Xanthomonas
vesicatoria ATCC 35937]
Length = 154
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 66/111 (59%), Gaps = 3/111 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+++EQQKK +KK+ ++++KELK D+ DY ++L+ R+FL++GDKVKV +
Sbjct: 46 GKFKFEQQKKANEAKKKT--KQVEIKELKFRPVTDEGDYQIKLRNMRRFLEEGDKVKVNI 103
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGE-LASEENKNFRDRNIFIILVPNKAL 118
+GRE + + E+ R + D+GE + E R + +++ P K +
Sbjct: 104 RFRGREMSHQELGREMAARIEADLGEDIVIESRPRLEGRQMVMMIAPKKKI 154
>gi|28493131|ref|NP_787292.1| translation initiation factor IF-3 [Tropheryma whipplei str. Twist]
gi|28572755|ref|NP_789535.1| translation initiation factor IF-3 [Tropheryma whipplei TW08/27]
gi|39931266|sp|Q83GT2.1|IF3_TROWT RecName: Full=Translation initiation factor IF-3
gi|39931269|sp|Q83HH0.1|IF3_TROW8 RecName: Full=Translation initiation factor IF-3
gi|28410888|emb|CAD67273.1| translation initiation factor IF-3 [Tropheryma whipplei TW08/27]
gi|28476171|gb|AAO44261.1| translation initiation factor IF-3 [Tropheryma whipplei str. Twist]
Length = 182
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 78/128 (60%), Gaps = 7/128 (5%)
Query: 9 SKYRYE-QQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
K+RYE QK K+ ++++S + +KE++ I +DY V+L+ A FL+ GDKVKV+
Sbjct: 57 GKFRYEASQKAKEARRRQSGVS---VKEVRFRLKICDNDYDVKLRKAISFLQAGDKVKVM 113
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP--NKALLQKAQE 124
+ +GRE + ++L+++F +D+ E S ++ + D R + I++ P +K ++++
Sbjct: 114 ILFRGREQSRPELGVKLLKKFADDISEFGSADSLSRTDGRGMAIMVSPIKSKTIVREKSS 173
Query: 125 PPKKKDKQ 132
+K DKQ
Sbjct: 174 HAQKGDKQ 181
>gi|88855450|ref|ZP_01130114.1| translation initiation factor IF-3 [marine actinobacterium
PHSC20C1]
gi|88815357|gb|EAR25215.1| translation initiation factor IF-3 [marine actinobacterium
PHSC20C1]
Length = 205
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 65/110 (59%), Gaps = 3/110 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE+ +K K + +++ N + LKE++ ID+HDY + K A FL GDKVK ++
Sbjct: 67 GKFKYEEAQKAK-EARRNQTNTI-LKEVRFRLKIDKHDYETKRKRAEGFLAGGDKVKAMI 124
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNKA 117
+GRE + + L+++F DV E S E+ D RN+ +I+ P+K
Sbjct: 125 LFRGREQSRPDQGVRLLQKFAEDVSEFGSIESTPMIDGRNMVMIIGPHKT 174
>gi|219666284|ref|YP_002456719.1| translation initiation factor IF-3 [Desulfitobacterium hafniense
DCB-2]
gi|219536544|gb|ACL18283.1| translation initiation factor IF-3 [Desulfitobacterium hafniense
DCB-2]
Length = 198
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YEQ K+ K +KK M++KE+K+ NI+ HD+ + + A++FL DGDKVKV +
Sbjct: 90 GKYKYEQAKRDKEARKKQKT--MEIKEVKLRPNIEDHDFETKARNAQRFLNDGDKVKVTI 147
Query: 69 NLKGRENEFRNIAIELIRRFQNDV-GELASEENKNFRDRNIFIILVPNK 116
+GRE + L R E E + RN+ +IL P K
Sbjct: 148 MFRGREVTHPELGRTLCLRLAEFCKAEANIERDPKLEGRNMIMILAPVK 196
>gi|116492467|ref|YP_804202.1| translation initiation factor 3 [Pediococcus pentosaceus ATCC
25745]
gi|421894609|ref|ZP_16325096.1| translation initiation factor IF-3 [Pediococcus pentosaceus IE-3]
gi|116102617|gb|ABJ67760.1| bacterial translation initiation factor 3 (bIF-3) [Pediococcus
pentosaceus ATCC 25745]
gi|385272524|emb|CCG90468.1| translation initiation factor IF-3 [Pediococcus pentosaceus IE-3]
Length = 166
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYR+EQQKK++ +KK + +KE+++ ID +D++ +LK A KFL GDKV+V +
Sbjct: 58 GKYRFEQQKKQREARKKQKT--VSIKEIRLSPTIDTNDFNTKLKNATKFLSKGDKVRVSI 115
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
KGR + I +++ R + ++A E + R++F++L P
Sbjct: 116 RFKGRAITHKEIGRKVLERMAKETSDVARVEVHPKMDGRSMFLVLSP 162
>gi|357416909|ref|YP_004929929.1| translation initiation factor IF-3 [Pseudoxanthomonas spadix
BD-a59]
gi|355334487|gb|AER55888.1| translation initiation factor IF-3 [Pseudoxanthomonas spadix
BD-a59]
Length = 154
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+++E QKK +KK+ ++++KELK D+ DY ++L+ R+FL++GDKVKV +
Sbjct: 46 GKFKFEAQKKANEAKKKT--KQVEIKELKFRPVTDEGDYQIKLRNMRRFLEEGDKVKVNI 103
Query: 69 NLKGRENEFRNIAIELIRRFQNDVG-ELASEENKNFRDRNIFIILVPNK 116
+GRE + + E+ R +ND+G E+ E R + +++ P K
Sbjct: 104 RFRGREMSHQELGREMAARIENDLGEEIVIESRPRLEGRQMVMMIAPKK 152
>gi|405980855|ref|ZP_11039184.1| translation initiation factor IF-3 [Actinomyces neuii BVS029A5]
gi|404392874|gb|EJZ87931.1| translation initiation factor IF-3 [Actinomyces neuii BVS029A5]
Length = 154
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YE +K + + +++ AN LKE++ ID+HDY + +FL GDKVKV++
Sbjct: 4 GKYKYEAAQKAR-EARRNQAN-TQLKEIRFRLKIDEHDYETKKGHVERFLNGGDKVKVMI 61
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + ++L+ R +DV EL + E+ +D RN+ ++L P K
Sbjct: 62 MFRGREQSRPELGVKLLERLADDVSELGTVESMPRQDGRNMTMVLGPVK 110
>gi|227494664|ref|ZP_03924980.1| possible translation initiation factor IF3 [Actinomyces coleocanis
DSM 15436]
gi|226831846|gb|EEH64229.1| possible translation initiation factor IF3 [Actinomyces coleocanis
DSM 15436]
Length = 152
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE +K + +++ AN + LKE++ ID HDY + +FL GDKVKV++
Sbjct: 4 GKFKYEAAQKAR-DARRNQANTV-LKEIRFRLKIDDHDYETKKGHVERFLNGGDKVKVMI 61
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + I L++R DV ELA+ E+ +D RN+ ++L P +
Sbjct: 62 MFRGREQSRPEMGIRLLQRLAEDVSELATVESAPRQDGRNMVMVLAPTR 110
>gi|403384333|ref|ZP_10926390.1| translation initiation factor IF-3 [Kurthia sp. JC30]
Length = 168
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+++EQQKK + +K + LKE+++ ID+HDY +L+ KFL+ GDKVK +
Sbjct: 59 GKFKFEQQKKDREVRKNQKV--IVLKEVRLSPTIDEHDYQTKLRNGIKFLEKGDKVKASI 116
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
KGR + I ++ RF D E+A+ E+ R++F++L P
Sbjct: 117 RFKGRAITHKEIGQRVLDRFAEDCKEVATVEQRAKMEGRSMFLVLQP 163
>gi|383766701|ref|YP_005445682.1| translation initiation factor IF-3 [Phycisphaera mikurensis NBRC
102666]
gi|381386969|dbj|BAM03785.1| translation initiation factor IF-3 [Phycisphaera mikurensis NBRC
102666]
Length = 248
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 79/129 (61%), Gaps = 8/129 (6%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++Y QQKK+ Q+ KS A + +LK +++ NID HD ++++ AR+FL DGDKV+ ++
Sbjct: 90 GKWKYAQQKKE--QKAKSHAKKSELKGMRLRPNIDSHDLGLKVRKAREFLDDGDKVQFVM 147
Query: 69 NLKGRENEFRNIAI-ELIRRFQN--DVGELASEENKNFRDRNIFIILVPNKALLQKA-QE 124
+GR+ R++A ++ F++ DVG++ E+ R + ++L P+K+ + A +
Sbjct: 148 LFRGRQMAHRDLARNTMMGVFEDLEDVGKI--EQAPKMMGRRMTMLLAPDKSGKESATRA 205
Query: 125 PPKKKDKQV 133
PK QV
Sbjct: 206 APKPTRDQV 214
>gi|3122257|sp|O33567.1|IF3_RHOS4 RecName: Full=Translation initiation factor IF-3
gi|2370447|emb|CAA75028.1| translation initiation factor 3 [Rhodobacter sphaeroides]
Length = 181
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YEQQK++ +KK + +++KE+K D HDY V++++ KFL +GDKVKV +
Sbjct: 74 GKFKYEQQKREAEARKKQ--HIIEIKEIKFRPGTDTHDYDVKMRSVLKFLSEGDKVKVTL 131
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS---EENKNFRDRNIFIILVP 114
+GRE + + +EL+ R V E + E R + +++ P
Sbjct: 132 RFRGREMAHQELGLELLNRVAAHVSEAEAGKVEAMPKLEGRQMVMMIAP 180
>gi|365841931|ref|ZP_09382976.1| translation initiation factor IF-3 [Flavonifractor plautii ATCC
29863]
gi|364576641|gb|EHM53955.1| translation initiation factor IF-3 [Flavonifractor plautii ATCC
29863]
Length = 202
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 69/110 (62%), Gaps = 3/110 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY++EQ K++K +K +++KE++M +ID +D++V+L+ A+KFL +G++VKV V
Sbjct: 89 GKYKFEQTKREKEARKNQHV--VEIKEVRMSPSIDVNDFNVKLRNAQKFLAEGNRVKVTV 146
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKA 117
+GRE +I L+ +F GE+A+ +++ R++ I L P A
Sbjct: 147 RFRGREMAHTDIGKGLLLKFAEQCGEVATLDKDPKLDGRHMSIFLSPKVA 196
>gi|373499793|ref|ZP_09590193.1| hypothetical protein HMPREF9140_00311 [Prevotella micans F0438]
gi|371956362|gb|EHO74150.1| hypothetical protein HMPREF9140_00311 [Prevotella micans F0438]
Length = 231
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 67/114 (58%), Gaps = 3/114 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SK+ Y+Q+K +K ++K + ++KE++ G D+HDY +LK A++FL G+KV+ V
Sbjct: 66 SKFLYQQKKHQKEMKQKQV--KQEVKEIRFGPQTDEHDYQFKLKHAQEFLSQGNKVRAYV 123
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKALLQK 121
+GR F+ L+ RF ND+ ELA E+ + +F+ L P KA + K
Sbjct: 124 FFRGRSILFKEQGEVLLLRFANDLEELAKVEQLPRLEGKKMFLYLTPKKAGVTK 177
>gi|256832335|ref|YP_003161062.1| translation initiation factor IF-3 [Jonesia denitrificans DSM
20603]
gi|256685866|gb|ACV08759.1| translation initiation factor IF-3 [Jonesia denitrificans DSM
20603]
Length = 233
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE K + + +++ AN + LKE++ ID HDY + +FL GDKVKV++
Sbjct: 80 GKFKYESAMKAR-EARRNQANTV-LKEIRFRLKIDDHDYGTKKGHVERFLSAGDKVKVMI 137
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + I L++R +DV EL E+ +D RN+ ++L P K
Sbjct: 138 MFRGREQSRPEMGIRLLQRLADDVAELGYVESSPKQDGRNMIMVLGPTK 186
>gi|169831542|ref|YP_001717524.1| translation initiation factor IF-3 [Candidatus Desulforudis
audaxviator MP104C]
gi|169638386|gb|ACA59892.1| translation initiation factor IF-3 [Candidatus Desulforudis
audaxviator MP104C]
Length = 187
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YEQ K+ K +KK + +KE+K+ I+ HD+ + + A +FLKDGDKVKV +
Sbjct: 78 GKYKYEQSKRDKEARKKQRI--ITIKEVKLRPGIEDHDFQTKARNAVRFLKDGDKVKVTL 135
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNK 116
+GRE ++ +L+++ V ELA E RN+ +IL P +
Sbjct: 136 VFRGREIVHPHLGQQLLKKLAEQVEELAVIERAPKLEGRNMIMILAPRQ 184
>gi|300021917|ref|YP_003754528.1| translation initiation factor IF-3 [Hyphomicrobium denitrificans
ATCC 51888]
gi|299523738|gb|ADJ22207.1| translation initiation factor IF-3 [Hyphomicrobium denitrificans
ATCC 51888]
Length = 176
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
K+++++QKK +K ++LKE+KM ID HDY V+L+A ++F ++GDKVK+
Sbjct: 70 FGKFKFQEQKKAAEARKNQKI--VELKEIKMRPGIDDHDYDVKLRAIKRFFEEGDKVKIT 127
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE + + +++R + D +A E F R + ++L P
Sbjct: 128 LRFRGREMAHSQLGMAVLQRVKVDTEAIAKVESEPRFEGRQMVMVLAP 175
>gi|110802686|ref|YP_699172.1| translation initiation factor IF-3 [Clostridium perfringens SM101]
gi|110683187|gb|ABG86557.1| translation initiation factor IF-3 [Clostridium perfringens SM101]
Length = 173
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 31 MDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQN 90
+ +KE+++ I++HD ++ K A+KFL+ GDKVK+ V +GRE E ++ ++++ F N
Sbjct: 86 ISVKEIRVSPTIEKHDLEIKAKNAKKFLEAGDKVKITVRFRGREAEHSHVGVKILDNFLN 145
Query: 91 DVGELAS-EENKNFRDRNIFIILVPNKA 117
+ E+ S E+ RN+ +IL P KA
Sbjct: 146 QLEEVCSVEKPAKLEGRNMIMILAPKKA 173
>gi|359407037|ref|ZP_09199673.1| translation initiation factor IF-3 [Prevotella stercorea DSM 18206]
gi|357553785|gb|EHJ35523.1| translation initiation factor IF-3 [Prevotella stercorea DSM 18206]
Length = 229
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 73/118 (61%), Gaps = 4/118 (3%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SK+ Y+Q+K K + K A ++++KE++ G D+HDY+ +LK A++FL +G+KV+ V
Sbjct: 66 SKFLYQQKKHAKEMKAKQA--KVEIKEIRFGPQTDEHDYNFKLKHAQEFLSEGNKVRAYV 123
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKA-LLQKAQE 124
+GR F+ L+ RF ND+ E A E+ + +F+ L P KA +++K+Q+
Sbjct: 124 FFRGRSILFKEQGEVLLLRFANDLEEYAKVEQLPKLDGKKMFLYLAPKKAGVVKKSQQ 181
>gi|429205413|ref|ZP_19196690.1| translation initiation factor IF-3 [Lactobacillus saerimneri 30a]
gi|428146485|gb|EKW98724.1| translation initiation factor IF-3 [Lactobacillus saerimneri 30a]
Length = 166
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 70/108 (64%), Gaps = 5/108 (4%)
Query: 9 SKYRYEQQKKKK-GQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
KYR+E QKK++ ++++ AN +KE+++ ID +D++ +++ A +F+ GDKV+V
Sbjct: 58 GKYRFELQKKQREARKRQKTAN---VKEVRLSPTIDTNDFNTKVRNAHRFISKGDKVRVS 114
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
+ KGR ++I E+++RF ++AS E++ D R++F++L P
Sbjct: 115 IRFKGRAITHKDIGREVLQRFAEATQDVASVESRAKMDGRSMFLVLAP 162
>gi|374604778|ref|ZP_09677730.1| translation initiation factor IF-3 [Paenibacillus dendritiformis
C454]
gi|374389608|gb|EHQ60978.1| translation initiation factor IF-3 [Paenibacillus dendritiformis
C454]
Length = 165
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+RYEQQKK+K +K +D+KE+ NID+HD+ +L+ KFL++GDKVK V
Sbjct: 58 GKFRYEQQKKEKEARKNQKT--VDIKEVWFRANIDEHDFQTKLRNVLKFLREGDKVKCSV 115
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILVP 114
+GRE +I +++ R + EL E R++ +IL P
Sbjct: 116 RFRGREIAHADIGKKVLDRVLVEANELCIVERVPKLEGRSMIMILAP 162
>gi|345883982|ref|ZP_08835400.1| hypothetical protein HMPREF0666_01576 [Prevotella sp. C561]
gi|345043188|gb|EGW47269.1| hypothetical protein HMPREF0666_01576 [Prevotella sp. C561]
Length = 226
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 78/134 (58%), Gaps = 8/134 (5%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SK+ Y+Q+K +K ++K + ++KE++ G D+HDY +LK A++FL G+KV+ V
Sbjct: 66 SKFLYQQKKHQKEMKQKQV--KQEVKEIRFGPQTDEHDYKFKLKHAQEFLNAGNKVRAYV 123
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKALLQKAQEPPK 127
+GR F+ L+ RF ND+ ELA E+ + +F+ L P KA + A++ +
Sbjct: 124 FFRGRSILFKEQGEVLLLRFANDLEELAKVEQLPKLEGKKMFLYLAPKKAGV--AKKSQQ 181
Query: 128 KKDKQVVDEVSTGV 141
K+D+ +E GV
Sbjct: 182 KRDR---EEAEAGV 192
>gi|330813583|ref|YP_004357822.1| translation initiation factor 3 [Candidatus Pelagibacter sp.
IMCC9063]
gi|327486678|gb|AEA81083.1| translation initiation factor 3 [Candidatus Pelagibacter sp.
IMCC9063]
Length = 109
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YE QKK +KK + LKE+K+ D HDY ++K A KFL +GDKVK +
Sbjct: 4 GKYKYELQKKANLARKKQKV--ILLKEIKLRPVTDVHDYDFKIKNAVKFLTNGDKVKFTI 61
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIIL 112
KGRE EF A +L+RR DV E+ E++ R + +I+
Sbjct: 62 KFKGREMEFIKAAYDLVRRIIEDVKEVGKVEQSAKMEGRQMTLII 106
>gi|403668439|ref|ZP_10933709.1| translation initiation factor IF-3 [Kurthia sp. JC8E]
Length = 170
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+++EQQKK + +K + LKE+++ ID+HDY +L+ KFL+ GDKVK +
Sbjct: 59 GKFKFEQQKKDREVRKNQKV--IVLKEVRLSPTIDEHDYQTKLRNGIKFLEKGDKVKASI 116
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
KGR + I ++ RF D E+A+ E+ R++F++L P
Sbjct: 117 RFKGRAITHKEIGQRVLDRFAEDCKEVATVEQRAKMEGRSMFLVLQP 163
>gi|254474280|ref|ZP_05087670.1| translation initiation factor IF-3 [Pseudovibrio sp. JE062]
gi|374329354|ref|YP_005079538.1| translation initiation factor 3 [Pseudovibrio sp. FO-BEG1]
gi|211956654|gb|EEA91864.1| translation initiation factor IF-3 [Pseudovibrio sp. JE062]
gi|359342142|gb|AEV35516.1| Translation initiation factor 3 [Pseudovibrio sp. FO-BEG1]
Length = 155
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
+Y+Y+ QKK +KK +++KE+KM NID HDY V+++ +F + GDKVKV +
Sbjct: 48 GRYKYQAQKKAAEARKKQKI--VEIKEIKMRPNIDTHDYEVKMRNMMRFFESGDKVKVTL 105
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE +++ ++L+ + + + ++A E + R + ++L P
Sbjct: 106 RFRGREMAHQDLGMKLLLKVKEETQDIAKVESHPKLEGRQMMMVLAP 152
>gi|89893013|ref|YP_516500.1| hypothetical protein DSY0267 [Desulfitobacterium hafniense Y51]
gi|423072079|ref|ZP_17060841.1| translation initiation factor IF-3 [Desulfitobacterium hafniense
DP7]
gi|89332461|dbj|BAE82056.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|361857214|gb|EHL09063.1| translation initiation factor IF-3 [Desulfitobacterium hafniense
DP7]
Length = 191
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YEQ K+ K +KK M++KE+K+ NI+ HD+ + + A++FL DGDKVKV +
Sbjct: 83 GKYKYEQAKRDKEARKKQKT--MEIKEVKLRPNIEDHDFETKARNAQRFLNDGDKVKVTI 140
Query: 69 NLKGRENEFRNIAIELIRRFQNDV-GELASEENKNFRDRNIFIILVPNK 116
+GRE + L R E E + RN+ +IL P K
Sbjct: 141 MFRGREVTHPELGRTLCLRLAEFCKAEANIERDPKLEGRNMIMILAPVK 189
>gi|296446966|ref|ZP_06888901.1| translation initiation factor IF-3 [Methylosinus trichosporium
OB3b]
gi|296255533|gb|EFH02625.1| translation initiation factor IF-3 [Methylosinus trichosporium
OB3b]
Length = 175
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+ +QKK +KK +++KE+K+ ID+HDY V++KA ++F ++GDKVKV +
Sbjct: 70 GKFRFLEQKKAAEARKKQKI--VEVKEIKLRPGIDEHDYEVKMKAVQRFFEEGDKVKVTL 127
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEE-NKNFRDRNIFIILVP 114
+GRE ++I L+ R + + +A E + R + ++L P
Sbjct: 128 RFRGREIAHQDIGYRLMTRVKAETANIAKVELEPSMEGRQMIMVLAP 174
>gi|163839501|ref|YP_001623906.1| translation initiation factor IF-3 [Renibacterium salmoninarum ATCC
33209]
gi|162952977|gb|ABY22492.1| translation initiation factor IF-3 [Renibacterium salmoninarum ATCC
33209]
Length = 353
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YE K + + +K+ N + LKE++ ID+HDY + A +FL GDKVK ++
Sbjct: 48 GKYKYEAAVKAR-EARKNQTNTV-LKEIRFRLKIDKHDYETKTGHALRFLGAGDKVKAMI 105
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGEL-ASEENKNFRDRNIFIILVPNK 116
+GRE + + I L+ RF DV E+ A E RN+ +++ P K
Sbjct: 106 QFRGREQQRPEMGIRLLNRFAEDVTEVGAVESTPRIDGRNMVMVIGPLK 154
>gi|424775441|ref|ZP_18202434.1| translation initiation factor IF-3 [Alcaligenes sp. HPC1271]
gi|422889151|gb|EKU31531.1| translation initiation factor IF-3 [Alcaligenes sp. HPC1271]
Length = 157
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+RY++QK++ Q+ K+ + +KE+K D+ DY V+L+ ++F+ DGDKVKV +
Sbjct: 48 GKFRYQEQKRQ--QEAKAKQKIIQIKEVKFRPGTDEGDYQVKLRNVKRFIDDGDKVKVTL 105
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNK 116
+GRE + + + ++ R +++V E+ E R + ++L P K
Sbjct: 106 RFRGREMAHQELGMRVLERIRDEVSEICQVEAMPKLEGRQMVMVLAPRK 154
>gi|296129471|ref|YP_003636721.1| translation initiation factor IF-3 [Cellulomonas flavigena DSM
20109]
gi|296021286|gb|ADG74522.1| translation initiation factor IF-3 [Cellulomonas flavigena DSM
20109]
Length = 415
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE K + + +++ AN + LKE++ ID HDY + +FLK GDKVKV++
Sbjct: 135 GKFKYEADMKAR-EARRNQANTI-LKEIRFRLKIDPHDYGTKKGHVERFLKAGDKVKVMI 192
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + + L++R DV EL E+ +D RN+ ++L P K
Sbjct: 193 MFRGREQSRPEMGVRLLQRLAADVAELGFIESMPKQDGRNMIMVLGPTK 241
>gi|339477936|ref|YP_004706756.1| translation initiation factor IF-3 [Candidatus Moranella endobia
PCIT]
gi|338172487|gb|AEI74888.1| translation initiation factor IF-3 [Candidatus Moranella endobia
PCIT]
Length = 179
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 63/110 (57%), Gaps = 4/110 (3%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+ YE+ K K Q+KK + +KE+K D+ DY V+L+ +FL++GDK K+ +
Sbjct: 71 GKFLYEKSKSIKEQKKKQRV--IQIKEIKFRPGTDEGDYQVKLRNLIRFLEEGDKAKITI 128
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEEN--KNFRDRNIFIILVPNK 116
+GRE + I IEL+ R ++D+ ELA E+ R ++L P+K
Sbjct: 129 RFRGREMAHQQIGIELLNRVRDDLSELAVVESFPSKIEGRQAIMVLAPHK 178
>gi|194466647|ref|ZP_03072634.1| translation initiation factor IF-3 [Lactobacillus reuteri 100-23]
gi|227543932|ref|ZP_03973981.1| translation initiation factor IF3 [Lactobacillus reuteri CF48-3A]
gi|338202613|ref|YP_004648758.1| translation initiation factor IF3 [Lactobacillus reuteri SD2112]
gi|423335624|ref|ZP_17313399.1| translation initiation factor IF-3 [Lactobacillus reuteri ATCC
53608]
gi|194453683|gb|EDX42580.1| translation initiation factor IF-3 [Lactobacillus reuteri 100-23]
gi|227186083|gb|EEI66154.1| translation initiation factor IF3 [Lactobacillus reuteri CF48-3A]
gi|336447853|gb|AEI56468.1| translation initiation factor IF3 [Lactobacillus reuteri SD2112]
gi|337728854|emb|CCC03973.1| translation initiation factor IF-3 [Lactobacillus reuteri ATCC
53608]
Length = 170
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYR+E QKK++ +KK + +KE+++ +ID +D++V+LK RKF++ GDKV++ +
Sbjct: 59 GKYRFEMQKKEREARKKQKT--ITVKEIRLSPSIDTNDFNVKLKRVRKFIEKGDKVRISL 116
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GR ++I ++I R + ++A+ + R+IF+ L P
Sbjct: 117 RFRGRAITHKDIGRDMIERMAEETSDIATVVQRPKMEGRSIFLTLAP 163
>gi|399046244|ref|ZP_10738702.1| translation initiation factor IF-3 [Brevibacillus sp. CF112]
gi|433543547|ref|ZP_20499952.1| translation initiation factor IF-3 [Brevibacillus agri BAB-2500]
gi|398055605|gb|EJL47666.1| translation initiation factor IF-3 [Brevibacillus sp. CF112]
gi|432185221|gb|ELK42717.1| translation initiation factor IF-3 [Brevibacillus agri BAB-2500]
Length = 167
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YEQ KK+K +K ++LKE++ NI++HD+ +L+ RKFL+D KVK +
Sbjct: 59 GKFKYEQAKKEKEARKNQKI--IELKEVRFSSNIEEHDFQTKLRNVRKFLEDHHKVKCTI 116
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVP 114
+GRE I + ++ R +LA+ E K R++ +IL P
Sbjct: 117 RFRGREITHSEIGLGVMERVAAQCEDLATPERKPKIEGRSMIMILAP 163
>gi|393758142|ref|ZP_10346966.1| translation initiation factor IF-3 [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
gi|393165834|gb|EJC65883.1| translation initiation factor IF-3 [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
Length = 138
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+RY++QK++ Q+ K+ + +KE+K D+ DY V+L+ ++F+ DGDKVKV +
Sbjct: 29 GKFRYQEQKRQ--QEAKAKQKIIQIKEVKFRPGTDEGDYQVKLRNVKRFIDDGDKVKVTL 86
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNK 116
+GRE + + + ++ R +++V E+ E R + ++L P K
Sbjct: 87 RFRGREMAHQELGMRVLERIRDEVSEICQVEAMPKLEGRQMVMVLAPRK 135
>gi|116333672|ref|YP_795199.1| translation initiation factor 3 [Lactobacillus brevis ATCC 367]
gi|116099019|gb|ABJ64168.1| bacterial translation initiation factor 3 (bIF-3) [Lactobacillus
brevis ATCC 367]
Length = 155
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 67/107 (62%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYR+E QKK++ +KK + +KE+++ ID +D++ +LK A+KFL G+KV+V +
Sbjct: 46 GKYRFELQKKQREARKKQKV--VSVKEVRLSPTIDTNDFNTKLKNAKKFLAKGEKVRVSI 103
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR ++I E++ R + ++A+ E + D R++F++L P
Sbjct: 104 RFKGRAITHKDIGREVLNRMAAETADVATVEQRPKMDGRSMFLMLSP 150
>gi|148544465|ref|YP_001271835.1| translation initiation factor 3 [Lactobacillus reuteri DSM 20016]
gi|184153830|ref|YP_001842171.1| translation initiation factor IF-3 [Lactobacillus reuteri JCM 1112]
gi|227363107|ref|ZP_03847242.1| translation initiation factor IF3 [Lactobacillus reuteri MM2-3]
gi|325682787|ref|ZP_08162303.1| translation initiation factor IF3 [Lactobacillus reuteri MM4-1A]
gi|148531499|gb|ABQ83498.1| bacterial translation initiation factor 3 (bIF-3) [Lactobacillus
reuteri DSM 20016]
gi|183225174|dbj|BAG25691.1| translation initiation factor IF-3 [Lactobacillus reuteri JCM 1112]
gi|227071825|gb|EEI10113.1| translation initiation factor IF3 [Lactobacillus reuteri MM2-3]
gi|324977137|gb|EGC14088.1| translation initiation factor IF3 [Lactobacillus reuteri MM4-1A]
Length = 170
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYR+E QKK++ +KK + +KE+++ +ID +D++V+LK RKF++ GDKV++ +
Sbjct: 59 GKYRFEMQKKEREARKKQKT--ITVKEIRLSPSIDTNDFNVKLKRVRKFIEKGDKVRISL 116
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GR ++I ++I R + ++A+ + R+IF+ L P
Sbjct: 117 RFRGRAITHKDIGRDMIERMAEETSDIATVVQRPKMEGRSIFLTLAP 163
>gi|344924718|ref|ZP_08778179.1| translation initiation factor IF-3 [Candidatus Odyssella
thessalonicensis L13]
Length = 147
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
Query: 31 MDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQN 90
+++KE++M ID++D++V+L+A R+FL++G+KVKV + +GRE +++ +E+I R +
Sbjct: 59 IEVKEIQMRPVIDENDFNVKLRAIRRFLEEGNKVKVAIRFRGREITHQDLGMEVINRVKE 118
Query: 91 DVGELAS-EENKNFRDRNIFIILVP 114
DV E+A ++ R I +IL P
Sbjct: 119 DVSEIAKVDQTPKLEGRQILMILSP 143
>gi|46198491|ref|YP_004158.1| translation initiation factor IF-3 [Thermus thermophilus HB27]
gi|55980520|ref|YP_143817.1| translation initiation factor IF-3 [Thermus thermophilus HB8]
gi|46196113|gb|AAS80531.1| bacterial protein translation initiation factor 3 (IF-3) [Thermus
thermophilus HB27]
gi|55771933|dbj|BAD70374.1| translation initiation factor 3 (IF-3) [Thermus thermophilus HB8]
Length = 144
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SK+RYEQQ +K +KK A R ++K +K ID+HDY +L ++FL++G KVKV +
Sbjct: 35 SKWRYEQQMAEKEARKK--AKRTEVKSIKFRVKIDEHDYQTKLGHIKRFLQEGHKVKVTI 92
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVPNK 116
+GRE + ++ R D+ +LA E K R++ ++L P K
Sbjct: 93 MFRGREVAHPELGERILNRVTEDLKDLAVVEMKPEMLGRDMNMLLAPVK 141
>gi|404493039|ref|YP_006717145.1| translation initiation factor IF-3 [Pelobacter carbinolicus DSM
2380]
gi|404397975|gb|ABA88665.2| translation initiation factor IF-3 [Pelobacter carbinolicus DSM
2380]
Length = 171
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+Y+ K+ +KKSA R+D+KE+KM ++HD+ V+L+ A +FL+ G+KVKV V
Sbjct: 64 GKYKYQASKRLAEAKKKSA--RVDIKEVKMRPKTEEHDFQVKLRNAMRFLEAGNKVKVTV 121
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNK 116
+GRE +L++R +VG+ E + R + +++ P K
Sbjct: 122 MFRGREVTHPEFGFDLMKRVAEEVGDAGQVEMSPRMAGRFMTMVIAPKK 170
>gi|377809852|ref|YP_005005073.1| translation initiation factor IF-3 [Pediococcus claussenii ATCC
BAA-344]
gi|361056593|gb|AEV95397.1| translation initiation factor IF-3 [Pediococcus claussenii ATCC
BAA-344]
Length = 167
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYR+EQQKK++ +K+ + +KE+++ ID +D++ +LK A+KFL GDKV+V +
Sbjct: 59 GKYRFEQQKKQREARKRQKI--VSIKEIRLSPTIDINDFNTKLKNAKKFLSKGDKVRVSI 116
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I ++ R + ++++ E + D R++F++L P
Sbjct: 117 RFKGRAITHKEIGRRVLERMAKEAADVSTVEARPKMDGRSMFLVLAP 163
>gi|229496109|ref|ZP_04389831.1| translation initiation factor IF-3 [Porphyromonas endodontalis ATCC
35406]
gi|229317005|gb|EEN82916.1| translation initiation factor IF-3 [Porphyromonas endodontalis ATCC
35406]
Length = 203
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
Query: 33 LKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQNDV 92
+KE++ G D HDY+ +LK AR F+ +G KVK V +GR F++ L+ RF D+
Sbjct: 96 IKEIRFGPQTDDHDYNFKLKHARSFIGEGSKVKAYVFFRGRSILFKDQGEVLLLRFATDL 155
Query: 93 GELASEEN-KNFRDRNIFIILVPNKALLQKAQEPPKKKDKQVVDEVS 138
++A+ E+ + + +F++L P K K Q+P + + Q D S
Sbjct: 156 EDIATVESMPSLEGKRMFMMLAPKKGTAPKKQQPKPQVEAQAADSDS 202
>gi|154250663|ref|YP_001411487.1| translation initiation factor IF-3 [Parvibaculum lavamentivorans
DS-1]
gi|171769438|sp|A7HPJ7.1|IF3_PARL1 RecName: Full=Translation initiation factor IF-3
gi|154154613|gb|ABS61830.1| translation initiation factor IF-3 [Parvibaculum lavamentivorans
DS-1]
Length = 173
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++Y+ QKK +KK +++KE+KM NID HDY V+++A +F ++GDKVKV +
Sbjct: 68 GKFKYQAQKKANEARKKQKT--VEVKEIKMRPNIDTHDYEVKMRAMLRFFEEGDKVKVTL 125
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEE-NKNFRDRNIFIILVP 114
+GRE + + + L+ + + +V +A E R + ++L P
Sbjct: 126 RFRGREMAHQELGMVLLNKVKEEVEPIAKVELYPRLEGRQMIMVLAP 172
>gi|77462485|ref|YP_351989.1| translation initiation factor IF-3 [Rhodobacter sphaeroides 2.4.1]
gi|126461362|ref|YP_001042476.1| translation initiation factor IF-3 [Rhodobacter sphaeroides ATCC
17029]
gi|77386903|gb|ABA78088.1| bacterial translation initiation factor 3 (bIF-3) [Rhodobacter
sphaeroides 2.4.1]
gi|126103026|gb|ABN75704.1| bacterial translation initiation factor 3 (bIF-3) [Rhodobacter
sphaeroides ATCC 17029]
Length = 194
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 62/109 (56%), Gaps = 5/109 (4%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YEQQK++ +KK + +++KE+K D HDY V++++ KFL +GDKVKV +
Sbjct: 87 GKFKYEQQKREAEARKKQ--HIIEIKEIKFRPGTDTHDYDVKMRSVLKFLSEGDKVKVTL 144
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS---EENKNFRDRNIFIILVP 114
+GRE + + +EL+ R V E + E R + +++ P
Sbjct: 145 RFRGREMAHQELGLELLNRVAAHVSEAEAGKVEAMPKLEGRQMVMMIAP 193
>gi|24211783|sp|Q8P7Z3.1|IF3_XANCP RecName: Full=Translation initiation factor IF-3
Length = 182
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 66/111 (59%), Gaps = 3/111 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+++EQQKK +KK+ ++++KELK D+ DY ++L+ R+FL++GDKVKV +
Sbjct: 74 GKFKFEQQKKANEAKKKT--KQVEIKELKFRPVTDEGDYQIKLRNMRRFLEEGDKVKVNI 131
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGE-LASEENKNFRDRNIFIILVPNKAL 118
+GRE + + E+ R + D+GE + E R + +++ P K +
Sbjct: 132 RFRGREMSHQELGREMAARIEADLGEDIVIESRPRLEGRQMVMMIAPKKKI 182
>gi|258647089|ref|ZP_05734558.1| translation initiation factor IF-3 [Prevotella tannerae ATCC 51259]
gi|260853036|gb|EEX72905.1| translation initiation factor IF-3 [Prevotella tannerae ATCC 51259]
Length = 214
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 3/117 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SK+ Y+Q+K +K + K+ ++++KE++ G D+HDY +LK A++FL DG+KVK V
Sbjct: 67 SKFLYQQKKHQK--ELKAKQVKIEVKEIRFGPQTDEHDYDFKLKHAKEFLSDGNKVKAYV 124
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKALLQKAQE 124
+GR F+ L+ RF ND+ E E+ + + I L P K K E
Sbjct: 125 FFRGRSILFKEQGEVLLLRFANDLEEYGKVEQMPVLEGKRMIIFLTPKKTATPKPAE 181
>gi|288802818|ref|ZP_06408255.1| translation initiation factor IF-3 [Prevotella melaninogenica D18]
gi|288334635|gb|EFC73073.1| translation initiation factor IF-3 [Prevotella melaninogenica D18]
Length = 219
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 67/114 (58%), Gaps = 3/114 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SK+ Y+Q+K +K ++K + ++KE++ G D+HDY +LK A++FL G+KV+ V
Sbjct: 59 SKFLYQQKKHQKEMKQKQV--KQEVKEIRFGPQTDEHDYKFKLKHAQEFLNAGNKVRAYV 116
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKALLQK 121
+GR F+ L+ RF ND+ ELA E+ + +F+ L P KA + K
Sbjct: 117 FFRGRSILFKEQGEVLLLRFSNDLEELAKVEQLPKLEGKKMFLYLAPKKAGVAK 170
>gi|452910878|ref|ZP_21959555.1| Translation initiation factor 3 [Kocuria palustris PEL]
gi|452834050|gb|EME36854.1| Translation initiation factor 3 [Kocuria palustris PEL]
Length = 471
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/139 (28%), Positives = 75/139 (53%), Gaps = 9/139 (6%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
KY+YE K + + +K+ +N LKE++ ID HDY ++ A++FL +GDKVK +
Sbjct: 113 FGKYKYEAAVKAR-ESRKNQSN-TSLKEVRFRLKIDDHDYETKVGHAKRFLTEGDKVKAM 170
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP------NKALLQ 120
+ +GRE + + L+ + D+ E E+ +D RN+ ++L P K+ +
Sbjct: 171 IQFRGREQSRPEMGVRLLGKLAEDLEEFGQVESSPRQDGRNMVMVLGPLKTKSEAKSAAR 230
Query: 121 KAQEPPKKKDKQVVDEVST 139
+A+E ++ ++ +V +
Sbjct: 231 RAKEAESDQESRLPSKVKS 249
>gi|433455341|ref|ZP_20413425.1| translation initiation factor IF-3 [Arthrobacter crystallopoietes
BAB-32]
gi|432197728|gb|ELK54093.1| translation initiation factor IF-3 [Arthrobacter crystallopoietes
BAB-32]
Length = 312
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YE K + + +K+ N + LKE++ ID+HDY + A +FL GDKVK ++
Sbjct: 46 GKYKYEAAVKAR-EARKNQTNTV-LKEIRFRLKIDKHDYETKRGHALRFLGAGDKVKAMI 103
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGEL-ASEENKNFRDRNIFIILVPNK 116
+GRE + + I L+++F +DV E+ A E + RN+ +++ P K
Sbjct: 104 QFRGREQQRPEMGIRLLQKFADDVAEVGAVESSPRIDGRNMVMVIGPLK 152
>gi|414342350|ref|YP_006983871.1| protein translation initiation factor 3 [Gluconobacter oxydans H24]
gi|411027685|gb|AFW00940.1| protein translation initiation factor 3 [Gluconobacter oxydans H24]
gi|453331622|dbj|GAC86536.1| translation initiation factor 3 [Gluconobacter thailandicus NBRC
3255]
Length = 173
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YEQQKKK +KK +++KE+K+ +HD+ +LKA FL DGDKVKV +
Sbjct: 68 GKFKYEQQKKKNEARKKQKV--IEIKEVKVRPGTGEHDFQTKLKAINSFLDDGDKVKVSL 125
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
KGRE + + +++ R + +V E A E+ +R + +++ P
Sbjct: 126 RFKGREMAHQELGAKMMERIRLEVEEKAKVEQMPRMENRQMLMVIAP 172
>gi|386360943|ref|YP_006059188.1| translation initiation factor IF-3 [Thermus thermophilus JL-18]
gi|20138516|sp|Q9ACJ8.1|IF3_THET2 RecName: Full=Translation initiation factor IF-3
gi|75520532|sp|Q70YI5.1|IF3_THETH RecName: Full=Translation initiation factor IF-3
gi|134048675|sp|Q5SKU2.2|IF3_THET8 RecName: Full=Translation initiation factor IF-3
gi|13508846|emb|CAC35168.1| translation initiation factor-3 (IF3) [Thermus thermophilus HB27]
gi|21901946|emb|CAD42331.1| translation initiation factor 3 [Thermus thermophilus]
gi|383509970|gb|AFH39402.1| translation initiation factor IF-3 [Thermus thermophilus JL-18]
Length = 171
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 63/110 (57%), Gaps = 3/110 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SK+RYEQQ +K +KK A R ++K +K ID+HDY +L ++FL++G KVKV +
Sbjct: 62 SKWRYEQQMAEKEARKK--AKRTEVKSIKFRVKIDEHDYQTKLGHIKRFLQEGHKVKVTI 119
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVPNKA 117
+GRE + ++ R D+ +LA E K R++ ++L P K
Sbjct: 120 MFRGREVAHPELGERILNRVTEDLKDLAVVEMKPEMLGRDMNMLLAPVKV 169
>gi|149913793|ref|ZP_01902325.1| translation initiation factor IF-3 [Roseobacter sp. AzwK-3b]
gi|149812077|gb|EDM71908.1| translation initiation factor IF-3 [Roseobacter sp. AzwK-3b]
Length = 136
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
K++YEQQK++ +KK +++KE+K N D HDY V+++ +FL++GDKVK+
Sbjct: 28 FGKFKYEQQKREAEARKKQKI--IEVKEVKFRPNTDTHDYDVKMRNVFRFLENGDKVKIT 85
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVP 114
+ +GRE +++ +L+ R DV +L EN R + +++ P
Sbjct: 86 LRFRGREMAHQDLGRDLLHRVAEDVKDLGKVENMPKMEGRQMIMVIGP 133
>gi|320449907|ref|YP_004202003.1| translation initiation factor IF-3 [Thermus scotoductus SA-01]
gi|320150076|gb|ADW21454.1| translation initiation factor IF-3 [Thermus scotoductus SA-01]
Length = 157
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SK+RYEQQ +K +KK A R ++K +K ID HDY +L ++FL +G KVKV +
Sbjct: 48 SKWRYEQQVAEKEARKK--AKRTEVKSIKFRVKIDDHDYQTKLNHIKRFLAEGHKVKVTI 105
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVPNK 116
+GRE + L+ R D+ LA E K R++ ++L P K
Sbjct: 106 MFRGREMSHPELGERLLERVAEDLKGLAVVEMKPELLGRDMNMLLAPAK 154
>gi|414164527|ref|ZP_11420774.1| translation initiation factor IF-3 [Afipia felis ATCC 53690]
gi|410882307|gb|EKS30147.1| translation initiation factor IF-3 [Afipia felis ATCC 53690]
Length = 200
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+++ QKK +KK +++KE+K+ ID HDY V+++A +F ++GDKVK+ +
Sbjct: 95 GKYKFQAQKKAAEARKKQKI--VEIKEIKLRPMIDDHDYDVKMRAMLRFFEEGDKVKITL 152
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE + I +L+ + + V ++A E++ F R + ++L P
Sbjct: 153 RYRGREMAHQEIGTKLLDKVKAAVADIAKVEQDAKFEGRQVVMVLAP 199
>gi|384430744|ref|YP_005640104.1| translation initiation factor IF-3 [Thermus thermophilus
SG0.5JP17-16]
gi|333966212|gb|AEG32977.1| translation initiation factor IF-3 [Thermus thermophilus
SG0.5JP17-16]
Length = 144
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SK+RYEQQ +K +KK A R ++K +K ID+HDY +L ++FL++G KVKV +
Sbjct: 35 SKWRYEQQMAEKEARKK--AKRTEVKSIKFRVKIDEHDYQTKLGHIKRFLQEGHKVKVTI 92
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVPNK 116
+GRE + +++ R D+ LA E K R++ ++L P K
Sbjct: 93 MFRGREMAHPELGEKILNRVTEDLKNLAVVEMKPEMLGRDMNMLLAPVK 141
>gi|153954229|ref|YP_001394994.1| hypothetical protein CKL_1604 [Clostridium kluyveri DSM 555]
gi|219854834|ref|YP_002471956.1| hypothetical protein CKR_1491 [Clostridium kluyveri NBRC 12016]
gi|146347110|gb|EDK33646.1| InfC [Clostridium kluyveri DSM 555]
gi|219568558|dbj|BAH06542.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 170
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SK+ YEQ KK K +K ++LKE+++ I+Q+D ++ ARKFL G+KVKV +
Sbjct: 64 SKFVYEQSKKAKLAKKNQKI--VELKEIRLSATIEQNDIEIKANNARKFLAKGNKVKVSI 121
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNK 116
+GR+N + N+ ++ F + V E AS E N+F+IL P K
Sbjct: 122 RFRGRQNNYTNLGRNVLNVFLSKVEEEASVERAPKLEGNNMFMILAPKK 170
>gi|111224589|ref|YP_715383.1| protein chain initiation factor 3 [Frankia alni ACN14a]
gi|111152121|emb|CAJ63849.1| Protein chain initiation factor 3, IF3, InfC [Frankia alni ACN14a]
Length = 147
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE +K++ +K +KE+K+ ID HDY + +FL+ GDKVK+ +
Sbjct: 27 GKFKYESDQKRREARKNQVQTV--IKEMKLRPKIDPHDYETKKGHVVRFLRAGDKVKITI 84
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNKAL-LQKAQEP 125
+GRE + I L++R DV EL E + +D RN+ +++ P+K Q+ EP
Sbjct: 85 MFRGREQSRPELGIRLLQRLSADVAELGYVEAQPKQDGRNMTMVMAPHKGSKPQRLPEP 143
>gi|299133291|ref|ZP_07026486.1| translation initiation factor IF-3 [Afipia sp. 1NLS2]
gi|298593428|gb|EFI53628.1| translation initiation factor IF-3 [Afipia sp. 1NLS2]
Length = 200
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+++ QKK +KK +++KE+K+ ID HDY V+++A +F ++GDKVK+ +
Sbjct: 95 GKYKFQAQKKAAEARKKQKI--VEIKEIKLRPMIDDHDYDVKMRAMLRFFEEGDKVKITL 152
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE + I +L+ + + V ++A E++ F R + ++L P
Sbjct: 153 RYRGREMAHQEIGTKLLDKVKAAVADIAKVEQDARFEGRQVVMVLAP 199
>gi|288918242|ref|ZP_06412597.1| translation initiation factor IF-3 [Frankia sp. EUN1f]
gi|288350412|gb|EFC84634.1| translation initiation factor IF-3 [Frankia sp. EUN1f]
Length = 166
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 61/110 (55%), Gaps = 3/110 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE +K++ +K +KE+K+ ID HDY + +FLK GDKVK+ +
Sbjct: 45 GKFKYESDQKRREARKNQVQTV--IKEMKLRPKIDPHDYETKKGHVVRFLKAGDKVKITI 102
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNKA 117
+GRE + I L++R DV +L E + +D RN+ +++ P+K
Sbjct: 103 MFRGREQSRPELGIRLLQRLSTDVADLGYVEAQPKQDGRNMTMVMAPHKG 152
>gi|158313564|ref|YP_001506072.1| initiation factor 3 [Frankia sp. EAN1pec]
gi|158108969|gb|ABW11166.1| initiation factor 3 [Frankia sp. EAN1pec]
Length = 149
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 61/110 (55%), Gaps = 3/110 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE +K++ +K +KE+K+ ID HDY + +FLK GDKVK+ +
Sbjct: 29 GKFKYESDQKRREARKNQVQTV--IKEMKLRPKIDPHDYETKKGHVVRFLKAGDKVKITI 86
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNKA 117
+GRE + I L++R DV +L E + +D RN+ +++ P+K
Sbjct: 87 MFRGREQSRPELGIRLLQRLSTDVADLGYVEAQPKQDGRNMTMVMAPHKG 136
>gi|444306945|ref|ZP_21142697.1| translation initiation factor IF-3 [Arthrobacter sp. SJCon]
gi|443480722|gb|ELT43665.1| translation initiation factor IF-3 [Arthrobacter sp. SJCon]
Length = 312
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YE K + + +K+ N + LKE++ ID HDY + A +FL GDKVK ++
Sbjct: 48 GKYKYEAAVKAR-EARKNQTNTV-LKEIRFRLKIDTHDYETKRGHALRFLGAGDKVKAMI 105
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILVPNK 116
+GRE + + I L++RF +DV E+ E + RN+ +++ P K
Sbjct: 106 QFRGREQQRPEMGIRLLQRFADDVAEVGVVESSPRIDGRNMVMVVGPLK 154
>gi|226311194|ref|YP_002771088.1| translation initiation factor IF-3 [Brevibacillus brevis NBRC
100599]
gi|226094142|dbj|BAH42584.1| translation initiation factor IF-3 [Brevibacillus brevis NBRC
100599]
Length = 173
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YEQ KK+K +K ++LKE++ NI++HD+ +L+ RKFL+D KVK +
Sbjct: 64 GKFKYEQAKKEKEARKNQKI--IELKEVRFSSNIEEHDFQTKLRNVRKFLEDQHKVKCTI 121
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVP 114
+GRE I + ++ R +LA+ E K R++ +IL P
Sbjct: 122 RFRGREITHSEIGLGVMERVAAQCEDLAAPERKPKIEGRSMIMILAP 168
>gi|357042172|ref|ZP_09103878.1| hypothetical protein HMPREF9138_00350 [Prevotella histicola F0411]
gi|355369631|gb|EHG17022.1| hypothetical protein HMPREF9138_00350 [Prevotella histicola F0411]
Length = 226
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 68/114 (59%), Gaps = 3/114 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SK+ Y+Q+K +K ++K + ++KE++ G D+HDY+ +LK A++FL G+KV+ V
Sbjct: 66 SKFLYQQKKHQKEMKQKQV--KQEVKEIRFGPQTDEHDYNFKLKHAQEFLNAGNKVRAYV 123
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKALLQK 121
+GR F+ L+ RF ND+ ELA E+ + +F+ L P KA + K
Sbjct: 124 FFRGRSILFKEQGEVLLLRFANDLEELAKVEQLPKLEGKKMFLYLAPKKAGVAK 177
>gi|410696769|gb|AFV75837.1| translation initiation factor IF-3 [Thermus oshimai JL-2]
Length = 171
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SK+RYEQQ +K +KK A R ++K +K ID HDY +L ++FL++G KVKV +
Sbjct: 62 SKWRYEQQVAEKEARKK--AKRTEVKSIKFRVKIDNHDYQTKLGHIKRFLEEGHKVKVTI 119
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVPNK 116
+GRE + L+ R D+ LA E K R++ ++L P K
Sbjct: 120 MFRGREVSHPELGQRLLERVAEDLKGLAVVEMKPELLGRDMNMLLAPAK 168
>gi|108759780|ref|YP_628849.1| translation initiation factor IF-3 [Myxococcus xanthus DK 1622]
gi|1352320|sp|P48516.2|IF3_MYXXA RecName: Full=Translation initiation factor IF-3
gi|123248162|sp|Q1DES4.1|IF3_MYXXD RecName: Full=Translation initiation factor IF-3
gi|436165|gb|AAC13748.1| Dsg [Myxococcus xanthus]
gi|108463660|gb|ABF88845.1| translation initiation factor IF-3 [Myxococcus xanthus DK 1622]
Length = 247
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 67/117 (57%), Gaps = 3/117 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE+ KKK + K A + LKE+K+ ++HDY +++ R+F++DG+K KV++
Sbjct: 73 GKFKYEE--KKKASEAKRAQVTVLLKEVKLRPKTEEHDYEFKVRNTRRFIEDGNKAKVVI 130
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILVPNKALLQKAQE 124
+GRE R ++ D+ ++A E+ R +F+IL P + QKA+E
Sbjct: 131 QFRGREITHREQGTAILDDVAKDLKDVAVVEQMPRMEGRLMFMILAPTPKVAQKARE 187
>gi|410865588|ref|YP_006980199.1| Translation initiation factor IF-3 [Propionibacterium
acidipropionici ATCC 4875]
gi|410822229|gb|AFV88844.1| Translation initiation factor IF-3 [Propionibacterium
acidipropionici ATCC 4875]
Length = 212
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE +K + + +++ +N + +KE+K+ ID HDY + +FL+ GDKVK+ +
Sbjct: 48 GKFKYEAAQKAR-ESRRNQSNTV-IKEMKLRPKIDDHDYETKKGHVVRFLRGGDKVKITI 105
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + + L+RR +DV E A+ E+ ++ RN+ +IL P +
Sbjct: 106 MFRGREQSRPELGVNLLRRLADDVEEYATVESPPKQEGRNMLMILAPTR 154
>gi|381190278|ref|ZP_09897801.1| translation initiation factor IF-3 [Thermus sp. RL]
gi|380451871|gb|EIA39472.1| translation initiation factor IF-3 [Thermus sp. RL]
Length = 144
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SK+RYEQQ +K +KK A R ++K +K ID+HDY +L ++FL++G KVKV +
Sbjct: 35 SKWRYEQQMAEKEARKK--AKRTEVKSIKFRVKIDEHDYQTKLGHIKRFLQEGHKVKVTI 92
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVPNK 116
+GRE + ++ R D+ +LA E K R++ ++L P K
Sbjct: 93 MXRGREVAHPELGERILNRVAEDLKDLAVVEMKPEMLGRDMNMLLAPVK 141
>gi|212691283|ref|ZP_03299411.1| hypothetical protein BACDOR_00774 [Bacteroides dorei DSM 17855]
gi|237712288|ref|ZP_04542769.1| translation initiation factor IF-3 [Bacteroides sp. 9_1_42FAA]
gi|265751996|ref|ZP_06087789.1| translation initiation factor IF-3 [Bacteroides sp. 3_1_33FAA]
gi|345512967|ref|ZP_08792491.1| translation initiation factor IF-3 [Bacteroides dorei 5_1_36/D4]
gi|423229341|ref|ZP_17215746.1| translation initiation factor IF-3 [Bacteroides dorei CL02T00C15]
gi|423245184|ref|ZP_17226258.1| translation initiation factor IF-3 [Bacteroides dorei CL02T12C06]
gi|212666515|gb|EEB27087.1| translation initiation factor IF-3 [Bacteroides dorei DSM 17855]
gi|229434953|gb|EEO45030.1| translation initiation factor IF-3 [Bacteroides dorei 5_1_36/D4]
gi|229453609|gb|EEO59330.1| translation initiation factor IF-3 [Bacteroides sp. 9_1_42FAA]
gi|263236788|gb|EEZ22258.1| translation initiation factor IF-3 [Bacteroides sp. 3_1_33FAA]
gi|392634310|gb|EIY28235.1| translation initiation factor IF-3 [Bacteroides dorei CL02T00C15]
gi|392640117|gb|EIY33923.1| translation initiation factor IF-3 [Bacteroides dorei CL02T12C06]
Length = 198
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 64/110 (58%), Gaps = 3/110 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SK+ Y+ +K++K Q+ K ++++KE++ G D HDY+ +LK A FL+DGDKVK V
Sbjct: 67 SKFLYQLKKRQKEQKAKQV--KVNVKEIRFGPQTDDHDYNFKLKHAIGFLQDGDKVKAYV 124
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKA 117
KGR F+ L+ RF ND+ E A E+ + + I L P KA
Sbjct: 125 FFKGRSILFKEQGEVLLLRFANDLEEYAKVEQMPLLEGKRMTISLAPKKA 174
>gi|423240165|ref|ZP_17221280.1| translation initiation factor IF-3 [Bacteroides dorei CL03T12C01]
gi|392645154|gb|EIY38888.1| translation initiation factor IF-3 [Bacteroides dorei CL03T12C01]
Length = 198
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 64/110 (58%), Gaps = 3/110 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SK+ Y+ +K++K Q+ K ++++KE++ G D HDY+ +LK A FL+DGDKVK V
Sbjct: 67 SKFLYQLKKRQKEQKAKQV--KVNVKEIRFGPQTDDHDYNFKLKHAIGFLQDGDKVKAYV 124
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKA 117
KGR F+ L+ RF ND+ E A E+ + + I L P KA
Sbjct: 125 FFKGRSILFKEQGEVLLLRFANDLEEYAKVEQMPLLEGKKMTISLAPKKA 174
>gi|294791033|ref|ZP_06756191.1| translation initiation factor IF-3 [Scardovia inopinata F0304]
gi|294458930|gb|EFG27283.1| translation initiation factor IF-3 [Scardovia inopinata F0304]
Length = 259
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 64/116 (55%), Gaps = 3/116 (2%)
Query: 10 KYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVN 69
KY+Y + K K +Q + + ++KE + ID HD+ V+ +FL+ GDKVKV +
Sbjct: 49 KYKYNE--KIKARQARRNQSTAEVKETRFRLKIDDHDFEVKKNQVSRFLEGGDKVKVSIM 106
Query: 70 LKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNKALLQKAQE 124
L+GRE IEL++R ++V E S E+ RD RNI ++L P + K E
Sbjct: 107 LRGREQSRPVGGIELLQRLADEVEEFGSVESAPRRDGRNIIMVLAPKGKKVHKQSE 162
>gi|385652536|ref|ZP_10047089.1| translation initiation factor IF-3 [Leucobacter chromiiresistens JG
31]
Length = 174
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
K++YE +K+K + +++ AN + LKE++ ID HDY ++K A FL GDKVK +
Sbjct: 34 FGKFKYEAAQKQK-EARRNQANTV-LKEVRFRLKIDTHDYETKMKRAVGFLSQGDKVKAM 91
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILVP 114
+ +GRE + + L+++F D+ E E N RN+ +++ P
Sbjct: 92 ILFRGREQSRPEMGVRLLQQFSEDIAEYGVVESNPRIDGRNMVMVVAP 139
>gi|415884130|ref|ZP_11546159.1| translation initiation factor IF-3 [Bacillus methanolicus MGA3]
gi|387591925|gb|EIJ84242.1| translation initiation factor IF-3 [Bacillus methanolicus MGA3]
Length = 167
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY++EQQKK++ +K +++KE+++ I++HD++ +L+ A KFL+ GDKVK +
Sbjct: 59 GKYKFEQQKKEREARKNQKI--INVKEVRLSPTIEEHDFNTKLRNAIKFLEKGDKVKASI 116
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I ++ RF E+A+ E+ D R++F++L P
Sbjct: 117 RFKGRAITHKEIGQRVLVRFAEACKEIATVESHPKMDGRSMFMVLAP 163
>gi|209883596|ref|YP_002287453.1| translation initiation factor IF-3 [Oligotropha carboxidovorans
OM5]
gi|337739334|ref|YP_004631062.1| translation initiation factor IF-3 [Oligotropha carboxidovorans
OM5]
gi|386028353|ref|YP_005949128.1| translation initiation factor IF-3 [Oligotropha carboxidovorans
OM4]
gi|209871792|gb|ACI91588.1| translation initiation factor IF-3 [Oligotropha carboxidovorans
OM5]
gi|336093421|gb|AEI01247.1| translation initiation factor IF-3 [Oligotropha carboxidovorans
OM4]
gi|336096998|gb|AEI04821.1| translation initiation factor IF-3 [Oligotropha carboxidovorans
OM5]
Length = 200
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+++ QKK +KK +++KE+K+ ID HDY V+++A +F ++GDKVK+ +
Sbjct: 95 GKYKFQAQKKAAEARKKQKI--VEIKEIKLRPMIDDHDYDVKMRAMLRFFEEGDKVKITL 152
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE +++ +L+ + + V ++A E++ F R + ++L P
Sbjct: 153 RYRGREMAHQDLGTKLLEKVKAAVADVAKVEQDAKFEGRQVVMVLAP 199
>gi|424842775|ref|ZP_18267400.1| translation initiation factor IF-3 [Saprospira grandis DSM 2844]
gi|395320973|gb|EJF53894.1| translation initiation factor IF-3 [Saprospira grandis DSM 2844]
Length = 202
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 66/111 (59%), Gaps = 3/111 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K+ YE++K++K + K ++ +KE++ G N D HD+ +LK A+ FL+DG KVK
Sbjct: 90 LKKFLYERKKREKELKAKQV--KVVIKEIRFGPNTDDHDFEFKLKHAKSFLEDGAKVKAY 147
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILVPNKA 117
V KGR F++ L++RF ++ EL+ ++ DR + + L P K+
Sbjct: 148 VQFKGRSIVFKDRGRTLLKRFVAELTELSVTDYPPKMEDRRMHVTLSPKKS 198
>gi|366085728|ref|ZP_09452213.1| translation initiation factor IF-3 [Lactobacillus zeae KCTC 3804]
Length = 154
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+E QKK++ +KK + +KE+++ I + D++ RLK A KFLK GDKVKV V
Sbjct: 46 GKFRFELQKKERDARKKQ--KTVTIKEIRLSPTIGEADFNTRLKNATKFLKKGDKVKVSV 103
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
+GR +++ +++ + + V E+A+ E D R++F++L P
Sbjct: 104 RFRGRAITHKDLGRKVLEQMADAVKEIATVETHPKMDGRSMFLMLAP 150
>gi|302346318|ref|YP_003814616.1| translation initiation factor IF-3 [Prevotella melaninogenica ATCC
25845]
gi|383812563|ref|ZP_09967998.1| translation initiation factor IF-3 [Prevotella sp. oral taxon 306
str. F0472]
gi|302150892|gb|ADK97153.1| translation initiation factor IF-3 [Prevotella melaninogenica ATCC
25845]
gi|383354764|gb|EID32313.1| translation initiation factor IF-3 [Prevotella sp. oral taxon 306
str. F0472]
Length = 226
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 67/114 (58%), Gaps = 3/114 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SK+ Y+Q+K +K ++K + ++KE++ G D+HDY +LK A++FL G+KV+ V
Sbjct: 66 SKFLYQQKKHQKEMKQKQV--KQEVKEIRFGPQTDEHDYKFKLKHAQEFLNAGNKVRAYV 123
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKALLQK 121
+GR F+ L+ RF ND+ ELA E+ + +F+ L P KA + K
Sbjct: 124 FFRGRSILFKEQGEVLLLRFANDLEELAKVEQLPKLEGKKMFLYLAPKKAGVAK 177
>gi|424793596|ref|ZP_18219687.1| Initiation factor IF-3 [Xanthomonas translucens pv. graminis
ART-Xtg29]
gi|422796532|gb|EKU25024.1| Initiation factor IF-3 [Xanthomonas translucens pv. graminis
ART-Xtg29]
Length = 146
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+++EQQKK +KK+ ++++KE+K D+ DY ++L+ R+FL++GDKVKV +
Sbjct: 39 GKFKFEQQKKANEAKKKT--KQVEIKEIKFRPVTDEGDYQIKLRNMRRFLEEGDKVKVNI 96
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGE-LASEENKNFRDRNIFIILVPNK 116
+GRE + + E+ R + D+GE + E R + +++ P K
Sbjct: 97 RFRGREMSHQELGREMASRIEADLGEDIVIESRPRLEGRQMVMMIAPKK 145
>gi|383785944|ref|YP_005470513.1| translation initiation factor IF-3 [Fervidobacterium pennivorans
DSM 9078]
gi|383108791|gb|AFG34394.1| translation initiation factor IF-3 [Fervidobacterium pennivorans
DSM 9078]
Length = 153
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YE K++ Q+ K +++KE+K I++HDY +LK R+FL+DG+KVKV V
Sbjct: 46 GKYKYELAKRE--QKAKKNQKIIEIKEMKFRPAINEHDYQTKLKHIRRFLEDGNKVKVTV 103
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE F + E++ R DV ++ + E+ R+++++L P
Sbjct: 104 MFRGREMAFIDKGKEILDRIAKDVSDIGTVEKEAKVEGRDMWMMLKP 150
>gi|149926878|ref|ZP_01915137.1| Initiation factor 3 [Limnobacter sp. MED105]
gi|149824430|gb|EDM83648.1| Initiation factor 3 [Limnobacter sp. MED105]
Length = 156
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+RY++QKK + KS ++ +KE+K D DY+V+L+ +FL+DGDK KV +
Sbjct: 48 GKFRYQEQKK--AAEAKSKQKQVQIKEIKFRPGTDDGDYNVKLRNLTRFLEDGDKCKVTL 105
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNK 116
+GRE ++I L+ R + D+ E+ E+ R + +++ P K
Sbjct: 106 RFRGREMAHQDIGARLLERVRTDLEEIGQVEQMPKMEGRQMVMMIAPRK 154
>gi|407697025|ref|YP_006821813.1| translation initiation factor IF-3 [Alcanivorax dieselolei B5]
gi|407254363|gb|AFT71470.1| Translation initiation factor IF-3 [Alcanivorax dieselolei B5]
Length = 157
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+ +EQ++K K +KK + +KE+K D DY V+L+ ++FL+ GDK KV V
Sbjct: 48 GKHLFEQKQKAKESRKKQ--RQTQVKEIKFRPGTDSGDYEVKLRNLKRFLETGDKAKVTV 105
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNK 116
+GRE + + EL+ R + D+ E S E+ N R + ++L P K
Sbjct: 106 RFRGREMAHQELGRELLARIEEDLAEYGSVEQRPNMEGRQMIMVLGPGK 154
>gi|117923679|ref|YP_864296.1| translation initiation factor 3 [Magnetococcus marinus MC-1]
gi|117607435|gb|ABK42890.1| bacterial translation initiation factor 3 (bIF-3) [Magnetococcus
marinus MC-1]
Length = 182
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 71/114 (62%), Gaps = 4/114 (3%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
+KY+Y++ +++ +K R+D KE+K D HDY V+L++ RKFL+ G+KVK +
Sbjct: 72 TKYKYQKAVRERIARKNQV--RIDTKEVKFRPGTDTHDYEVKLRSIRKFLEGGNKVKCTM 129
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKALLQK 121
+GRE +++ + ++++ +++V +L E+ R I ++L PN AL++K
Sbjct: 130 RFRGREMAHQDLGLVMLKKVESEVLDLGKVEQEPKLLGRQITMMLAPN-ALVKK 182
>gi|56964454|ref|YP_176185.1| translation initiation factor IF-3 [Bacillus clausii KSM-K16]
gi|61213073|sp|Q5WEI6.1|IF3_BACSK RecName: Full=Translation initiation factor IF-3
gi|56910697|dbj|BAD65224.1| translation initiation factor IF-3 [Bacillus clausii KSM-K16]
Length = 167
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYRYEQQKK+K +K + +KE+++ I+ +D++ +L+ ARKFL+ GDKVK +
Sbjct: 59 GKYRYEQQKKEKEARKNQKV--ITIKEVRLSPTIEANDFNTKLRNARKFLEKGDKVKASI 116
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GR I +++ R + ++A+ E R++F+++ P
Sbjct: 117 RFRGRAITHSQIGRDVLERLAKECEDIATIEARPKMEGRSMFLVMAP 163
>gi|150006538|ref|YP_001301282.1| translation initiation factor IF-3 [Bacteroides vulgatus ATCC 8482]
gi|294778843|ref|ZP_06744260.1| translation initiation factor IF-3 [Bacteroides vulgatus PC510]
gi|319642945|ref|ZP_07997581.1| translation initiation factor IF-3 [Bacteroides sp. 3_1_40A]
gi|345521558|ref|ZP_08800881.1| translation initiation factor IF-3 [Bacteroides sp. 4_3_47FAA]
gi|423314013|ref|ZP_17291948.1| translation initiation factor IF-3 [Bacteroides vulgatus
CL09T03C04]
gi|166198948|sp|A6L7J6.1|IF3_BACV8 RecName: Full=Translation initiation factor IF-3
gi|149934962|gb|ABR41660.1| translation initiation factor IF-3 [Bacteroides vulgatus ATCC 8482]
gi|254834354|gb|EET14663.1| translation initiation factor IF-3 [Bacteroides sp. 4_3_47FAA]
gi|294447296|gb|EFG15879.1| translation initiation factor IF-3 [Bacteroides vulgatus PC510]
gi|317385493|gb|EFV66436.1| translation initiation factor IF-3 [Bacteroides sp. 3_1_40A]
gi|392683611|gb|EIY76945.1| translation initiation factor IF-3 [Bacteroides vulgatus
CL09T03C04]
Length = 198
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 64/110 (58%), Gaps = 3/110 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SK+ Y+ +K++K Q+ K ++++KE++ G D HDY+ +LK A FL+DGDKVK V
Sbjct: 67 SKFLYQLKKRQKEQKAKQV--KVNVKEIRFGPQTDDHDYNFKLKHAIGFLQDGDKVKAYV 124
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKA 117
KGR F+ L+ RF ND+ E A E+ + + I L P KA
Sbjct: 125 FFKGRSILFKEQGEVLLLRFANDLEEYAKVEQMPLLEGKRMTISLAPKKA 174
>gi|261880447|ref|ZP_06006874.1| initiation factor IF3 [Prevotella bergensis DSM 17361]
gi|270332870|gb|EFA43656.1| initiation factor IF3 [Prevotella bergensis DSM 17361]
Length = 228
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SK+ Y+Q+K++K ++K ++D+KE++ G D HDY+ +L A++FLK+G+KV+ V
Sbjct: 66 SKFLYQQKKRQKEMKQKQV--KVDVKEIRFGPQTDDHDYNFKLNHAKQFLKEGNKVRAYV 123
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNK 116
+GR F+ L+ RF ND+ E A E+ + +F+ L P K
Sbjct: 124 FFRGRSILFKEQGELLLLRFANDLEEYAKVEQLPKLEGKRMFLFLAPKK 172
>gi|51210011|ref|YP_063675.1| translation initiation factor 3 [Gracilaria tenuistipitata var.
liui]
gi|68052104|sp|Q6B8N5.1|IF3C_GRATL RecName: Full=Translation initiation factor IF-3, chloroplastic
gi|50657765|gb|AAT79750.1| translation initiation factor 3 [Gracilaria tenuistipitata var.
liui]
Length = 181
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 29 NRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRF 88
+ + +KE+KM Y ID HDY+VR+ A +FL+ GDKVK V +GRE + +AIEL+ +
Sbjct: 92 HNVTIKEVKMRYKIDVHDYNVRINQAFRFLQGGDKVKANVIFRGREIQHTKLAIELLNKM 151
Query: 89 QNDVGELASEENKNFRD-RNIFIILVPNK 116
D+ ++ + +D +N+ +IL P K
Sbjct: 152 AQDLSHISEIQQPPAKDGKNMIMILSPKK 180
>gi|103485760|ref|YP_615321.1| translation initiation factor IF-3 [Sphingopyxis alaskensis RB2256]
gi|98975837|gb|ABF51988.1| bacterial translation initiation factor 3 (bIF-3) [Sphingopyxis
alaskensis RB2256]
Length = 173
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 61/111 (54%), Gaps = 3/111 (2%)
Query: 5 YFFLSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKV 64
+ + KY+YE QKK +K ++KE+KM NID HD+ V++K FL++GDKV
Sbjct: 64 FLDVGKYKYEAQKKANLARKSQKTQ--EIKEIKMRPNIDDHDFDVKMKKVFDFLEEGDKV 121
Query: 65 KVIVNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
K+ + +GRE + + +++R E+A E + R + ++L P
Sbjct: 122 KMTMRFRGREMSHTQLGLNVLQRVAELTAEVAKVEAHPRTEGRQMLMVLAP 172
>gi|384439314|ref|YP_005654038.1| translation initiation factor IF-3 [Thermus sp. CCB_US3_UF1]
gi|359290447|gb|AEV15964.1| Translation initiation factor IF-3 [Thermus sp. CCB_US3_UF1]
Length = 157
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SK+RYEQQ +K +KK A R ++K +K ID HDY +L ++FL++G KVKV +
Sbjct: 48 SKWRYEQQVAEKEARKK--AKRTEVKSIKFRVKIDNHDYQTKLNHIKRFLEEGHKVKVTI 105
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVPNK 116
+GRE + +L+ R D+ LA E + R++ ++L P K
Sbjct: 106 MFRGREMSHPELGEKLLERVAEDLKGLAVVEMRPELLGRDMNMLLAPAK 154
>gi|297565682|ref|YP_003684654.1| translation initiation factor IF-3 [Meiothermus silvanus DSM 9946]
gi|296850131|gb|ADH63146.1| translation initiation factor IF-3 [Meiothermus silvanus DSM 9946]
Length = 174
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+RYEQQ+ +K +KK A R ++K +K ID+HDY +L R+FL++G KVK+ +
Sbjct: 62 GKWRYEQQQAEKEARKK--AKRTEVKSIKFRPKIDEHDYQTKLGHVRRFLEEGHKVKITI 119
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVP 114
+GRE + ++ R D+G A E K R++ +++ P
Sbjct: 120 MFRGREMAHPELGSRILERAVADLGPAAVVELKPEMAGRDMNMVIAP 166
>gi|332878462|ref|ZP_08446183.1| translation initiation factor IF-3 [Capnocytophaga sp. oral taxon
329 str. F0087]
gi|357044507|ref|ZP_09106157.1| translation initiation factor IF-3 [Paraprevotella clara YIT 11840]
gi|332683557|gb|EGJ56433.1| translation initiation factor IF-3 [Capnocytophaga sp. oral taxon
329 str. F0087]
gi|355532560|gb|EHH01943.1| translation initiation factor IF-3 [Paraprevotella clara YIT 11840]
Length = 214
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SK+ Y+Q+K++K + K+ ++D+KE++ G D HDY+ +LK A+ FL DGDKVK V
Sbjct: 67 SKFLYQQKKRQK--EMKAKQVKVDVKEIRFGPQTDDHDYNFKLKHAQGFLSDGDKVKAYV 124
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
KGR F+ L+ RF ND+ E E+ + + I + P
Sbjct: 125 FFKGRSILFKEQGEVLLLRFANDLEEYGKVEQMPVLEGKRMTIFIAP 171
>gi|260592278|ref|ZP_05857736.1| translation initiation factor IF-3 [Prevotella veroralis F0319]
gi|260535912|gb|EEX18529.1| translation initiation factor IF-3 [Prevotella veroralis F0319]
Length = 226
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 67/114 (58%), Gaps = 3/114 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SK+ Y+Q+K +K ++K + ++KE++ G D+HDY +LK A++FL G+KV+ V
Sbjct: 66 SKFLYQQKKHQKEMKQKQV--KQEVKEIRFGPQTDEHDYKFKLKHAQEFLNAGNKVRAYV 123
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKALLQK 121
+GR F+ L+ RF ND+ ELA E+ + +F+ L P KA + K
Sbjct: 124 FFRGRSILFKEQGEVLLLRFANDLEELAKVEQLPKLEGKKMFLYLAPKKAGVAK 177
>gi|334336835|ref|YP_004541987.1| translation initiation factor IF-3 [Isoptericola variabilis 225]
gi|334107203|gb|AEG44093.1| Translation initiation factor IF-3 [Isoptericola variabilis 225]
Length = 294
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 10 KYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVN 69
K++YE K + + +++ AN + LKE++ ID HDY+ + +FL GDKVKV++
Sbjct: 85 KFKYESDMKAR-EARRNQANTV-LKEIRFRLKIDPHDYATKRGHVERFLSAGDKVKVMIM 142
Query: 70 LKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + + L++R +DV EL E+ +D RN+ ++L P K
Sbjct: 143 FRGREQSRPEMGVRLLQRLADDVSELGFVESMPKQDGRNMTMVLAPVK 190
>gi|285017865|ref|YP_003375576.1| translation initiation factor if-3 [contains: if-3l; if-3s] protein
[Xanthomonas albilineans GPE PC73]
gi|283473083|emb|CBA15588.1| probable translation initiation factor if-3 [contains: if-3l;
if-3s] protein [Xanthomonas albilineans GPE PC73]
Length = 153
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+++EQQKK +KK+ ++++KE+K D+ DY ++L+ R+FL++GDKVKV +
Sbjct: 46 GKFKFEQQKKANEAKKKT--KQVEIKEIKFRPVTDEGDYQIKLRNMRRFLEEGDKVKVNI 103
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGE-LASEENKNFRDRNIFIILVPNK 116
+GRE + + E+ R + D+GE + E R + +++ P K
Sbjct: 104 RFRGREMSHQELGREMAARIEADLGEDIVIESRPRLEGRQMVMMIAPKK 152
>gi|209966089|ref|YP_002299004.1| translation initiation factor IF-3 [Rhodospirillum centenum SW]
gi|209959555|gb|ACJ00192.1| translation initiation factor IF-3 InfC [Rhodospirillum centenum
SW]
Length = 144
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 67/107 (62%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE QKK +KK +++KE+K+ NID HDY ++++ R+FL++GDKVKV +
Sbjct: 39 GKFKYEAQKKANEARKKQKI--IEVKEVKLRPNIDDHDYDIKMRNMRRFLEEGDKVKVTM 96
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE +++ + ++ + ++ + +LA E+ + + ++L P
Sbjct: 97 RFRGREMAHQDLGMVILVKVRDTLEDLAKVEQMPKLEGKQMIMVLAP 143
>gi|258654266|ref|YP_003203422.1| translation initiation factor IF-3 [Nakamurella multipartita DSM
44233]
gi|258557491|gb|ACV80433.1| translation initiation factor IF-3 [Nakamurella multipartita DSM
44233]
Length = 227
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 63/118 (53%), Gaps = 3/118 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE +K + ++ +KE+K+ ID HDY + +FLK GDKVKV +
Sbjct: 108 GKFKYESAQKAREARRNQVLT--VIKEMKLRPKIDSHDYETKKGHVVRFLKAGDKVKVTI 165
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNKALLQKAQEP 125
+GRE + L++R DV EL E+ +D RN+ ++L P+K + + +P
Sbjct: 166 MFRGREQSRPELGFRLLQRLSADVAELGFVESAPKQDGRNMIMVLAPHKQVRPRQGQP 223
>gi|381206815|ref|ZP_09913886.1| translation initiation factor IF-3 [SAR324 cluster bacterium
JCVI-SC AAA005]
Length = 186
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 67/110 (60%), Gaps = 5/110 (4%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++Y+Q K++ K + LKE+K+ I+ HD +++ A +FL++GDKVKV V
Sbjct: 78 GKFKYQQSKRQ--HAAKVHQKVIHLKEVKLRPKIEDHDLQFKVRNALRFLEEGDKVKVNV 135
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGE--LASEENKNFRDRNIFIILVPNK 116
GRE +++ + LI RFQN +GE + + +N R++F+IL P+K
Sbjct: 136 VFMGREMAHKDLGLVLIERFQNMIGENGIVEQPVRN-EGRSMFMILAPSK 184
>gi|373464483|ref|ZP_09556021.1| translation initiation factor IF-3 [Lactobacillus kisonensis F0435]
gi|371762404|gb|EHO50935.1| translation initiation factor IF-3 [Lactobacillus kisonensis F0435]
Length = 169
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 68/110 (61%), Gaps = 3/110 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYR+E+QKK++ +KK + +KE+++ ID +D++ +LK A+KFL G+KV+V +
Sbjct: 59 GKYRFEEQKKERESRKKQKV--ISVKEVRLSPTIDVNDFNTKLKNAKKFLAKGEKVRVSI 116
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNKA 117
KGR ++I ++ R + ++A+ + D R++F++L PN A
Sbjct: 117 RFKGRAITHKDIGRRVLDRMAAETSDVATVTQRPKMDGRSMFLMLSPNDA 166
>gi|332284529|ref|YP_004416440.1| translation initiation factor IF-3 [Pusillimonas sp. T7-7]
gi|330428482|gb|AEC19816.1| translation initiation factor IF-3 [Pusillimonas sp. T7-7]
Length = 163
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 69/118 (58%), Gaps = 4/118 (3%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++Y++QK++ Q+ K+ + +KE+K D+ DY V+L+ R+F+++GDK KV +
Sbjct: 48 GKFKYQEQKRQ--QEAKAKQKVIQVKEVKFRPGTDEGDYQVKLRNLRRFIEEGDKAKVTL 105
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPN-KALLQKAQE 124
+GRE + + + ++ R ++D+ EL E R + ++L P KA+ KA E
Sbjct: 106 RFRGREMAHQELGMRVLERVRDDLAELCQVEAMPKLEGRQMVMVLAPRKKAVAGKAAE 163
>gi|218658944|ref|ZP_03514874.1| translation initiation factor IF-3 [Rhizobium etli IE4771]
Length = 111
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y QKK +KK +++KE+KM NID HDY V++KA +F +GDKVKV
Sbjct: 21 LGKLKYANQKKAAEARKKQKI--VEVKEIKMRPNIDTHDYEVKMKAMGRFFDEGDKVKVT 78
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELA 96
+ +GRE + + ++L+++ + D E+A
Sbjct: 79 LKFRGREMAHQELGMKLLQQVKADTTEIA 107
>gi|414169273|ref|ZP_11425110.1| translation initiation factor IF-3 [Afipia clevelandensis ATCC
49720]
gi|410886032|gb|EKS33845.1| translation initiation factor IF-3 [Afipia clevelandensis ATCC
49720]
Length = 126
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++++ QKK +KK +++KE+K+ ID HDY V+++A +F ++GDKVK+ +
Sbjct: 21 GKFKFQAQKKAAEARKKQ--KTVEIKEIKLRPMIDDHDYDVKMRAMLRFFEEGDKVKITL 78
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE + I +L+ + + V ++A E++ F R + ++L P
Sbjct: 79 RYRGREMAHQEIGTKLLDKVKAAVADVAKVEQDAKFEGRQVVMVLAP 125
>gi|220912249|ref|YP_002487558.1| translation initiation factor IF-3 [Arthrobacter chlorophenolicus
A6]
gi|219859127|gb|ACL39469.1| translation initiation factor IF-3 [Arthrobacter chlorophenolicus
A6]
Length = 356
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YE K + + +K+ N + LKE++ ID HDY + A +FL GDKVK ++
Sbjct: 74 GKYKYEAAVKAR-EARKNQTNTV-LKEIRFRLKIDTHDYETKRGHALRFLGAGDKVKAMI 131
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILVPNK 116
+GRE + + I L++RF +DV E+ E + RN+ +++ P K
Sbjct: 132 QFRGREQQRPEMGIRLLQRFADDVAEVGVVESSPRIDGRNMVMVVGPLK 180
>gi|46446336|ref|YP_007701.1| translation initiation factor IF-3 [Candidatus Protochlamydia
amoebophila UWE25]
gi|46399977|emb|CAF23426.1| probable translation initiation factor IF-3 [Candidatus
Protochlamydia amoebophila UWE25]
Length = 184
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+RY+Q K++K + K A +++ +KE+K+ NID HD + + AR FL G+KVKV
Sbjct: 59 GKFRYDQSKREK--ENKKAQHQIKVKEIKLKPNIDVHDLETKTRHARDFLASGNKVKVTC 116
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVP 114
+GRE I +++R ++ ++++ E+ R + ++L P
Sbjct: 117 TFRGREMMHPEIGEKIVREMCQELEDISTPESPAKMMGRMLLVVLAP 163
>gi|282859091|ref|ZP_06268222.1| translation initiation factor IF-3 [Prevotella bivia JCVIHMP010]
gi|424899082|ref|ZP_18322628.1| translation initiation factor IF-3 [Prevotella bivia DSM 20514]
gi|282588121|gb|EFB93295.1| translation initiation factor IF-3 [Prevotella bivia JCVIHMP010]
gi|388593296|gb|EIM33534.1| translation initiation factor IF-3 [Prevotella bivia DSM 20514]
Length = 227
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 65/110 (59%), Gaps = 3/110 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SK+ Y+Q+K +K ++K + ++KE++ G D+HDY +LK A++FL +G+KV+ V
Sbjct: 66 SKFLYQQKKHQKEMKQKQV--KQEIKEIRFGPQTDEHDYKFKLKHAQEFLNEGNKVRAYV 123
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKA 117
+GR F+ L+ RF ND+ ELA E+ + +F+ L P K
Sbjct: 124 FFRGRSILFKEQGEVLLLRFANDLEELAKVEQLPKLEGKKMFLYLAPKKT 173
>gi|294626196|ref|ZP_06704802.1| translation initiation factor IF-3 [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|294667580|ref|ZP_06732795.1| translation initiation factor IF-3 [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|325927168|ref|ZP_08188431.1| bacterial translation initiation factor 3 (bIF-3) [Xanthomonas
perforans 91-118]
gi|292599548|gb|EFF43679.1| translation initiation factor IF-3 [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292602700|gb|EFF46136.1| translation initiation factor IF-3 [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|325542481|gb|EGD13960.1| bacterial translation initiation factor 3 (bIF-3) [Xanthomonas
perforans 91-118]
Length = 147
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+++EQQKK +KK+ ++++KELK D+ DY ++L+ R+FL++GDKVKV +
Sbjct: 39 GKFKFEQQKKANEAKKKT--KQVEIKELKFRPVTDEGDYQIKLRNMRRFLEEGDKVKVNI 96
Query: 69 NLKGRENEFRNIAIELIRRFQNDVG-ELASEENKNFRDRNIFIILVPNK 116
+GRE + + E+ R + D+G ++ E R + +++ P K
Sbjct: 97 RFRGREMSHQELGREMAARIEADLGDDIVIESRPRLEGRQMVMMIAPKK 145
>gi|297182829|gb|ADI18981.1| translation initiation factor 3 (if-3) [uncultured delta
proteobacterium HF0010_10I05]
Length = 186
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 66/110 (60%), Gaps = 5/110 (4%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++Y+Q K++ K + +KE+K+ I+ HD +++ A +FL+DGDKVKV V
Sbjct: 78 GKFKYQQSKRQ--HAAKVHQKVIHVKEVKLRPKIEDHDLQFKVRNALRFLEDGDKVKVNV 135
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGE--LASEENKNFRDRNIFIILVPNK 116
GRE +++ + LI RFQN +GE + + +N R++F+IL P K
Sbjct: 136 VFMGREMAHKDLGLVLIERFQNMIGENGIVEQPVRN-EGRSMFMILAPPK 184
>gi|325856667|ref|ZP_08172305.1| translation initiation factor IF-3 [Prevotella denticola CRIS
18C-A]
gi|327313433|ref|YP_004328870.1| translation initiation factor IF-3 [Prevotella denticola F0289]
gi|325483381|gb|EGC86356.1| translation initiation factor IF-3 [Prevotella denticola CRIS
18C-A]
gi|326945632|gb|AEA21517.1| translation initiation factor IF-3 [Prevotella denticola F0289]
Length = 226
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 68/114 (59%), Gaps = 3/114 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SK+ Y+Q+K +K ++K + ++KE++ G D+HDY+ +LK A++FL G+KV+ V
Sbjct: 66 SKFLYQQKKHQKELKQKQV--KQEVKEIRFGPQTDEHDYNFKLKHAQEFLNAGNKVRAYV 123
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKALLQK 121
+GR F+ L+ RF ND+ ELA E+ + +F+ L P KA + K
Sbjct: 124 FFRGRSILFKEQGEVLLLRFANDLEELAKVEQLPKLEGKKMFLYLAPKKAGVAK 177
>gi|325269094|ref|ZP_08135715.1| translation initiation factor IF3 [Prevotella multiformis DSM
16608]
gi|324988715|gb|EGC20677.1| translation initiation factor IF3 [Prevotella multiformis DSM
16608]
Length = 226
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 72/118 (61%), Gaps = 4/118 (3%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SK+ Y+Q+K +K ++K + ++KE++ G D+HDY+ +LK A++FL G+KV+ V
Sbjct: 66 SKFLYQQKKHQKEMKQKQV--KQEVKEIRFGPQTDEHDYNFKLKHAQEFLNAGNKVRAYV 123
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNK-ALLQKAQE 124
+GR F+ L+ RF ND+ ELA E+ + +F+ L P K +++K+Q+
Sbjct: 124 FFRGRSILFKEQGEVLLLRFANDLEELAKVEQLPKLEGKKMFLYLAPKKVGIVKKSQQ 181
>gi|338733287|ref|YP_004671760.1| translation initiation factor IF-3 [Simkania negevensis Z]
gi|336482670|emb|CCB89269.1| translation initiation factor IF-3 [Simkania negevensis Z]
Length = 167
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYRY+ KK++ + K A ++ LKE+K+ NID+HD ++K AR+F++ G+KV+V
Sbjct: 59 GKYRYQITKKER--ESKKAQHQAKLKEIKVKPNIDEHDLMTKIKHAREFIEKGNKVRVTC 116
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE + ++ RF ++ ++A E + RN+ ++L P
Sbjct: 117 MFRGREMAHPELGEKVTERFVQELKDIAQVEASPKLMGRNLSLVLAP 163
>gi|86137521|ref|ZP_01056098.1| translation initiation factor [Roseobacter sp. MED193]
gi|85825856|gb|EAQ46054.1| translation initiation factor [Roseobacter sp. MED193]
Length = 137
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
K++YEQQK++ +KK +++KE+K N D +DYSV+++ KFL+ GDKVK+
Sbjct: 28 FGKFKYEQQKRESEARKKQKI--IEVKEVKFRPNTDTNDYSVKMRNVFKFLEAGDKVKIT 85
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVP 114
+ +GRE +N+ +L+ R DV ++ EN R + +++ P
Sbjct: 86 LRFRGREMAHQNLGRQLLERVAEDVKDMGKVENMPKMEGRQMVMMIGP 133
>gi|116670038|ref|YP_830971.1| translation initiation factor 3 [Arthrobacter sp. FB24]
gi|116610147|gb|ABK02871.1| bacterial translation initiation factor 3 (bIF-3) [Arthrobacter sp.
FB24]
Length = 396
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YE K + + +K+ N + LKE++ ID HDY + A +FL GDKVK ++
Sbjct: 85 GKYKYEAAVKAR-EARKNQTNTV-LKEIRFRLKIDTHDYETKRGHALRFLGAGDKVKAMI 142
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILVP 114
+GRE + + I L++RF +DV E+ E + RN+ +++ P
Sbjct: 143 QFRGREQQRPEMGIRLLQRFADDVAEVGVVESSPRIDGRNMVMVVGP 189
>gi|347531903|ref|YP_004838666.1| translation initiation factor IF-3 [Roseburia hominis A2-183]
gi|345502051|gb|AEN96734.1| translation initiation factor IF-3 [Roseburia hominis A2-183]
Length = 165
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 65/110 (59%), Gaps = 3/110 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYRYE +K+K +KK +++KE+++ NID +D + ++ AA+KFL GDKVK+ +
Sbjct: 58 GKYRYELARKEKEARKKQKV--VEIKEIRLSPNIDSNDLNTKMNAAKKFLSKGDKVKITL 115
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILVPNKA 117
+GRE N + ++ F +GE+A E+ R+I ++L K+
Sbjct: 116 RFRGREMAHMNASKHILDDFAASLGEIAVVEKAPKVEGRSISMVLAEKKS 165
>gi|427430188|ref|ZP_18920083.1| Translation initiation factor 3 [Caenispirillum salinarum AK4]
gi|425878941|gb|EKV27651.1| Translation initiation factor 3 [Caenispirillum salinarum AK4]
Length = 173
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 69/107 (64%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE QKKK +KK +++KE+K+ NID++DY V+++ ++FL+ GDKVK +
Sbjct: 68 GKFKYESQKKKAEARKKQKV--VEVKEVKLRPNIDENDYQVKMRNVKRFLEAGDKVKCTL 125
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE +++ ++++ R +++ ++A E++ R + +++ P
Sbjct: 126 RFRGREMAHQDLGMKVLMRVRDEFEDVAKVEQHPKMEGRQMVMVMAP 172
>gi|405356186|ref|ZP_11025206.1| Translation initiation factor 3 [Chondromyces apiculatus DSM 436]
gi|397090782|gb|EJJ21623.1| Translation initiation factor 3 [Myxococcus sp. (contaminant ex DSM
436)]
Length = 212
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 67/117 (57%), Gaps = 3/117 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE+ KKK + K A + LKE+K+ ++HDY +++ R+F++DG+K KV++
Sbjct: 35 GKFKYEE--KKKASEAKRAQVTVLLKEVKLRPKTEEHDYEFKVRNTRRFIEDGNKAKVVI 92
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILVPNKALLQKAQE 124
+GRE + ++ D+ ++A E+ R +F+IL P + QKA+E
Sbjct: 93 QFRGREITHKEQGTAILDDVAKDLKDVAVVEQMPRMEGRLMFMILAPTPKVAQKARE 149
>gi|403526590|ref|YP_006661477.1| translation initiation factor IF-3 [Arthrobacter sp. Rue61a]
gi|403229017|gb|AFR28439.1| translation initiation factor IF-3 [Arthrobacter sp. Rue61a]
Length = 338
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YE K + + +K+ N + LKE++ ID+HDY + A +FL GDKVK ++
Sbjct: 48 GKYKYEAAVKAR-EARKNQTNTV-LKEIRFRLKIDKHDYETKRGHALRFLGAGDKVKAMI 105
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILVPNK 116
+GRE + + I L++RF DV E+ E + RN+ +++ P K
Sbjct: 106 QFRGREQQRPEMGIRLLQRFAEDVAEVGIIESSPRIDGRNMVMVIGPLK 154
>gi|281423151|ref|ZP_06254064.1| translation initiation factor IF-3 [Prevotella oris F0302]
gi|281402487|gb|EFB33318.1| translation initiation factor IF-3 [Prevotella oris F0302]
Length = 231
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 71/118 (60%), Gaps = 4/118 (3%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SK+ Y+Q+K +K ++K ++++KE++ G D+HDY +LK AR+FL +G+KV+ V
Sbjct: 66 SKFLYQQKKHQKEMKQKQV--KVEVKEIRFGPQTDEHDYQFKLKHAREFLNEGNKVRAYV 123
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNK-ALLQKAQE 124
+GR F+ L+ RF ND+ E E+ + +F+ L P K +++K+Q+
Sbjct: 124 FFRGRSILFKEQGEVLLLRFANDLEEFGKVEQMPKLEGKKMFLYLAPKKVGVVKKSQQ 181
>gi|289661761|ref|ZP_06483342.1| translation initiation factor IF-3 [Xanthomonas campestris pv.
vasculorum NCPPB 702]
gi|289668712|ref|ZP_06489787.1| translation initiation factor IF-3 [Xanthomonas campestris pv.
musacearum NCPPB 4381]
Length = 159
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 66/111 (59%), Gaps = 3/111 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+++EQQKK +KK+ ++++KELK D+ DY ++L+ R+FL++GDKVKV +
Sbjct: 51 GKFKFEQQKKANEAKKKT--KQVEIKELKFRPVTDEGDYQIKLRNMRRFLEEGDKVKVNI 108
Query: 69 NLKGRENEFRNIAIELIRRFQNDVG-ELASEENKNFRDRNIFIILVPNKAL 118
+GRE + + E+ R + D+G ++ E R + +++ P K +
Sbjct: 109 RFRGREMSHQELGREMAARIEADLGDDIVIESRPRLEGRQMVMMIAPKKKI 159
>gi|21243324|ref|NP_642906.1| translation initiation factor IF-3 [Xanthomonas axonopodis pv.
citri str. 306]
gi|78048350|ref|YP_364525.1| translation initiation factor IF-3 [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|346725462|ref|YP_004852131.1| translation initiation factor IF-3 [Xanthomonas axonopodis pv.
citrumelo F1]
gi|418517095|ref|ZP_13083262.1| translation initiation factor IF-3 [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
gi|418520472|ref|ZP_13086521.1| translation initiation factor IF-3 [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
gi|21108866|gb|AAM37442.1| initiation factor IF-3 [Xanthomonas axonopodis pv. citri str. 306]
gi|78036780|emb|CAJ24473.1| Initiation factor IF-3 [Xanthomonas campestris pv. vesicatoria str.
85-10]
gi|346650209|gb|AEO42833.1| translation initiation factor IF-3 [Xanthomonas axonopodis pv.
citrumelo F1]
gi|410703853|gb|EKQ62341.1| translation initiation factor IF-3 [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
gi|410706152|gb|EKQ64615.1| translation initiation factor IF-3 [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
Length = 159
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+++EQQKK +KK+ ++++KELK D+ DY ++L+ R+FL++GDKVKV +
Sbjct: 51 GKFKFEQQKKANEAKKKT--KQVEIKELKFRPVTDEGDYQIKLRNMRRFLEEGDKVKVNI 108
Query: 69 NLKGRENEFRNIAIELIRRFQNDVG-ELASEENKNFRDRNIFIILVPNK 116
+GRE + + E+ R + D+G ++ E R + +++ P K
Sbjct: 109 RFRGREMSHQELGREMAARIEADLGDDIVIESRPRLEGRQMVMMIAPKK 157
>gi|390991771|ref|ZP_10262027.1| translation initiation factor IF-3 [Xanthomonas axonopodis pv.
punicae str. LMG 859]
gi|372553524|emb|CCF69002.1| translation initiation factor IF-3 [Xanthomonas axonopodis pv.
punicae str. LMG 859]
Length = 143
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 65/110 (59%), Gaps = 3/110 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
K+++EQQKK +KK+ ++++KELK D+ DY ++L+ R+FL++GDKVKV
Sbjct: 34 FGKFKFEQQKKANEAKKKT--KQVEIKELKFRPVTDEGDYQIKLRNMRRFLEEGDKVKVN 91
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVG-ELASEENKNFRDRNIFIILVPNK 116
+ +GRE + + E+ R + D+G ++ E R + +++ P K
Sbjct: 92 IRFRGREMSHQELGREMAARIEADLGDDIVIESRPRLEGRQMVMMIAPKK 141
>gi|288574760|ref|ZP_06393117.1| translation initiation factor IF-3 [Dethiosulfovibrio peptidovorans
DSM 11002]
gi|288570501|gb|EFC92058.1| translation initiation factor IF-3 [Dethiosulfovibrio peptidovorans
DSM 11002]
Length = 161
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+RY+QQK++K +KK LKE+KM ID+HDY+ + KA R FL++G +VKV +
Sbjct: 38 GKFRYQQQKREKDARKKQKTQ--TLKEMKMRPKIDEHDYNFKTKAIRSFLENGHRVKVSI 95
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVP 114
+GRE F + E++ R D +L E R + +++ P
Sbjct: 96 FFRGREMAFLDRGKEVLDRVAKDCEDLGKMEGFPRMEGRYMRMMITP 142
>gi|84515522|ref|ZP_01002884.1| translation initiation factor [Loktanella vestfoldensis SKA53]
gi|84510805|gb|EAQ07260.1| translation initiation factor [Loktanella vestfoldensis SKA53]
Length = 136
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 61/108 (56%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
K++YE QKK+ +KK +++KE+K N D HDY V++++ KFL++GDKVK+
Sbjct: 28 FGKFKYETQKKEAEARKKQKI--IEIKEIKFRPNTDSHDYEVKMRSVFKFLENGDKVKIT 85
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVP 114
+ +GRE + + +L+ R D E EN R + +++ P
Sbjct: 86 LRFRGREMAHQELGRQLLERVAEDTKETGKVENFPKMEGRQMVMLIGP 133
>gi|451344343|ref|ZP_21913403.1| translation initiation factor IF-3 [Eggerthia catenaformis OT 569 =
DSM 20559]
gi|449337057|gb|EMD16225.1| translation initiation factor IF-3 [Eggerthia catenaformis OT 569 =
DSM 20559]
Length = 184
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYR+EQQKK + Q+K S A + LKE ++ ID HD +V+LK K+L+DG KVKV+V
Sbjct: 77 GKYRFEQQKKIREQKKNSKA--VSLKETQLSPTIDVHDKNVKLKRTIKWLEDGSKVKVVV 134
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNK 116
+GR+ +I +++ F + E + E+ R + IL P K
Sbjct: 135 RFRGRQLAHIDIGQKILDDFVAECEEYCNVEKPAKMEGRMLIAILAPKK 183
>gi|333978106|ref|YP_004516051.1| Translation initiation factor IF-3 [Desulfotomaculum kuznetsovii
DSM 6115]
gi|333821587|gb|AEG14250.1| Translation initiation factor IF-3 [Desulfotomaculum kuznetsovii
DSM 6115]
Length = 231
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 76/129 (58%), Gaps = 3/129 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YEQ K++K +K+ +++KE+K+ +I++HD+ V+ + A +FLK+GDKVK +
Sbjct: 97 GKYKYEQSKREKEAKKRQRI--INIKEVKLRPSIEEHDFQVKARNAARFLKEGDKVKATI 154
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILVPNKALLQKAQEPPK 127
+GRE + +L+ R V +L+ E +N+ +IL P + + + ++ K
Sbjct: 155 MFRGREIMHTQLGHQLLLRLAEQVKDLSIIERQPKLEGKNMVMILAPRQDIKPENKQESK 214
Query: 128 KKDKQVVDE 136
++ KQ + +
Sbjct: 215 QETKQEIQQ 223
>gi|338972428|ref|ZP_08627802.1| translation initiation factor 3 [Bradyrhizobiaceae bacterium SG-6C]
gi|338234388|gb|EGP09504.1| translation initiation factor 3 [Bradyrhizobiaceae bacterium SG-6C]
Length = 189
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++++ QKK +KK +++KE+K+ ID HDY V+++A +F ++GDKVK+ +
Sbjct: 84 GKFKFQAQKKAAEARKKQKT--VEIKEIKLRPMIDDHDYDVKMRAMLRFFEEGDKVKITL 141
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE + I +L+ + + V ++A E++ F R + ++L P
Sbjct: 142 RYRGREMAHQEIGTKLLDKVKAAVADVAKVEQDAKFEGRQVVMVLAP 188
>gi|381170881|ref|ZP_09880033.1| translation initiation factor IF-3 [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
gi|380688604|emb|CCG36520.1| translation initiation factor IF-3 [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
Length = 154
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+++EQQKK +KK+ ++++KELK D+ DY ++L+ R+FL++GDKVKV +
Sbjct: 46 GKFKFEQQKKANEAKKKT--KQVEIKELKFRPVTDEGDYQIKLRNMRRFLEEGDKVKVNI 103
Query: 69 NLKGRENEFRNIAIELIRRFQNDVG-ELASEENKNFRDRNIFIILVPNK 116
+GRE + + E+ R + D+G ++ E R + +++ P K
Sbjct: 104 RFRGREMSHQELGREMAARIEADLGDDIVIESRPRLEGRQMVMMIAPKK 152
>gi|379009356|ref|YP_005267169.1| protein chain initiation factor IF-3 [Wigglesworthia glossinidia
endosymbiont of Glossina morsitans morsitans (Yale
colony)]
gi|375157880|gb|AFA40946.1| protein chain initiation factor IF-3 [Wigglesworthia glossinidia
endosymbiont of Glossina morsitans morsitans (Yale
colony)]
Length = 187
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 62/110 (56%), Gaps = 4/110 (3%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+ YE+ K K Q+KK +++KE+K N D DY V+L+ FL +GDKVK+ +
Sbjct: 76 GKFLYEKNKSHKEQKKKQKT--INIKEIKFRPNTDIGDYQVKLRKLTSFLNNGDKVKITL 133
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEEN--KNFRDRNIFIILVPNK 116
+GRE + I I ++ R D+ ELA E+ K R + +IL+P K
Sbjct: 134 RFRGREIIHQEIGINMLNRICQDLKELAIIESFPKKIEGRQMVLILIPKK 183
>gi|317502973|ref|ZP_07961062.1| translation initiation factor IF3 [Prevotella salivae DSM 15606]
gi|315665909|gb|EFV05487.1| translation initiation factor IF3 [Prevotella salivae DSM 15606]
Length = 230
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 71/118 (60%), Gaps = 4/118 (3%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SK+ Y+Q+K +K ++K ++++KE++ G D+HDY +LK AR+FL +G+KV+ V
Sbjct: 66 SKFLYQQKKHQKEMKQKQV--KVEVKEIRFGPQTDEHDYQFKLKHAREFLNEGNKVRAYV 123
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNK-ALLQKAQE 124
+GR F+ L+ RF ND+ E E+ + +F+ L P K +++K+Q+
Sbjct: 124 FFRGRSILFKEQGEVLLLRFANDLEEFGKVEQMPKLEGKKMFLYLAPKKVGVVKKSQQ 181
>gi|299140595|ref|ZP_07033733.1| translation initiation factor IF-3 [Prevotella oris C735]
gi|298577561|gb|EFI49429.1| translation initiation factor IF-3 [Prevotella oris C735]
Length = 231
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 71/118 (60%), Gaps = 4/118 (3%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SK+ Y+Q+K +K ++K ++++KE++ G D+HDY +LK AR+FL +G+KV+ V
Sbjct: 66 SKFLYQQKKHQKEMKQKQV--KVEVKEIRFGPQTDEHDYQFKLKHAREFLNEGNKVRAYV 123
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNK-ALLQKAQE 124
+GR F+ L+ RF ND+ E E+ + +F+ L P K +++K+Q+
Sbjct: 124 FFRGRSILFKEQGEVLLLRFANDLEEFGKVEQMPKLEGKKMFLYLAPKKVGVVKKSQQ 181
>gi|18310876|ref|NP_562810.1| translation initiation factor IF-3 [Clostridium perfringens str.
13]
gi|18145558|dbj|BAB81600.1| translation initiation factor IF-3 [Clostridium perfringens str.
13]
Length = 134
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 31 MDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQN 90
+ +KE+++ I++HD ++ K A+KFL+ GDKVK+ V +GRE E ++ ++++ F
Sbjct: 47 ISVKEIRVSPTIEKHDLEIKAKNAKKFLEAGDKVKITVRFRGREAEHSHVGVKILDSFLA 106
Query: 91 DVGELAS-EENKNFRDRNIFIILVPNKA 117
+ E+ S E+ RN+ +IL P KA
Sbjct: 107 QLEEVCSVEKPAKLEGRNMIMILAPKKA 134
>gi|156741418|ref|YP_001431547.1| translation initiation factor IF-3 [Roseiflexus castenholzii DSM
13941]
gi|156232746|gb|ABU57529.1| translation initiation factor IF-3 [Roseiflexus castenholzii DSM
13941]
Length = 225
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+RYEQ KK++ +K ++D+K++++ D+HD V+ K AR+FL DGDKVK +
Sbjct: 77 GKFRYEQSKKEREARKNQ--KQVDVKQIRLEPKTDEHDLDVKAKQARRFLLDGDKVKFNL 134
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILVPNK 116
+GRE + I +E++ R ++ +++ E+ R + ++L PN+
Sbjct: 135 RFRGREIFHQEIGLEMLERMAEELRDVSVVEQRPTMEGRVLTLLLAPNQ 183
>gi|389577576|ref|ZP_10167604.1| translation initiation factor IF-3 [Eubacterium cellulosolvens 6]
gi|389313061|gb|EIM57994.1| translation initiation factor IF-3 [Eubacterium cellulosolvens 6]
Length = 176
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 62/105 (59%), Gaps = 3/105 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYRYEQ +++K +KK + +D+KE++M NID +D + ++ AARKFL GDKVKV +
Sbjct: 69 GKYRYEQARREKEARKKQ--HTVDIKEIRMSPNIDTNDLNTKVGAARKFLAKGDKVKVTI 126
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIIL 112
+GRE + ++ F + ++ E+ RN+ I+L
Sbjct: 127 RFRGREMAHMQASRPILLDFAKALEDICIVEKQPKIEGRNMSIVL 171
>gi|284033334|ref|YP_003383265.1| translation initiation factor IF-3 [Kribbella flavida DSM 17836]
gi|283812627|gb|ADB34466.1| translation initiation factor IF-3 [Kribbella flavida DSM 17836]
Length = 240
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YE +K + + +++ N + +KE+K+ ID HDY + +FL+ GDKVK+ +
Sbjct: 74 GKYKYETAQKAR-ESRRNQTNTV-IKEMKLRPKIDPHDYETKKGHVVRFLRAGDKVKITI 131
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + L++R DV EL E+ +D RN+ ++L P+K
Sbjct: 132 MFRGREQSRPELGFRLLQRLAEDVSELGFVESSPRQDGRNMIMVLGPHK 180
>gi|442323728|ref|YP_007363749.1| translation initiation factor IF-3 [Myxococcus stipitatus DSM
14675]
gi|441491370|gb|AGC48065.1| translation initiation factor IF-3 [Myxococcus stipitatus DSM
14675]
Length = 207
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 10 KYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVN 69
K++YE+ KKK + K A + LKE+K+ ++HDY +++ R+F+++G+K KV++
Sbjct: 36 KFKYEE--KKKASEAKRAQLIVHLKEVKLRPKTEEHDYEFKVRNTRRFIEEGNKAKVVIQ 93
Query: 70 LKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILVPNKALLQKAQE 124
+GRE + ++ D+ E+A E+ R +F+IL P + Q+A+E
Sbjct: 94 FRGREITHKEQGTAILDDVAKDLKEVAVVEQPPRMEGRLMFMILAPTPKVAQRARE 149
>gi|323344264|ref|ZP_08084490.1| translation initiation factor IF3 [Prevotella oralis ATCC 33269]
gi|323094993|gb|EFZ37568.1| translation initiation factor IF3 [Prevotella oralis ATCC 33269]
Length = 230
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 68/114 (59%), Gaps = 3/114 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SK+ Y+Q+K++K + K+ ++++KE++ G D+HDY +LK A++FL +G+KV+ V
Sbjct: 66 SKFLYQQKKRQK--EMKAKQVKVEVKEIRFGPQTDEHDYQFKLKHAKEFLNEGNKVRAYV 123
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKALLQK 121
+GR F+ L+ RF ND+ EL E+ + +F+ L P K + K
Sbjct: 124 FFRGRSILFKEQGEVLLLRFANDLEELGKVEQMPKLEGKKMFLYLAPKKVGVAK 177
>gi|119961908|ref|YP_947378.1| translation initiation factor IF-3 [Arthrobacter aurescens TC1]
gi|119948767|gb|ABM07678.1| translation initiation factor IF-3 [Arthrobacter aurescens TC1]
Length = 344
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YE K + + +K+ N + LKE++ ID+HDY + A +FL GDKVK ++
Sbjct: 48 GKYKYEAAVKAR-EARKNQTNTV-LKEIRFRLKIDKHDYETKRGHALRFLGAGDKVKAMI 105
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILVPNK 116
+GRE + + I L++RF DV E+ E + RN+ +++ P K
Sbjct: 106 QFRGREQQRPEMGIRLLQRFAEDVAEVGIIESSPRIDGRNMVMVIGPLK 154
>gi|254524881|ref|ZP_05136936.1| translation initiation factor IF-3 [Stenotrophomonas sp. SKA14]
gi|219722472|gb|EED40997.1| translation initiation factor IF-3 [Stenotrophomonas sp. SKA14]
Length = 154
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+++E QKK +KKS ++++KE+K D+ DY ++L+ R+FL+DGDK+KV +
Sbjct: 46 GKFKFEAQKKANEAKKKS--KQVEIKEVKFRPVTDEGDYQIKLRKMREFLEDGDKIKVNI 103
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGE-LASEENKNFRDRNIFIILVPNK 116
+GRE + + E+ R + D+GE + E R + +++ P K
Sbjct: 104 RFRGREMSHQELGREMANRIEADLGEDIVIESRPRLEGRQMVMMIAPKK 152
>gi|392948613|ref|ZP_10314220.1| Translation initiation factor 3 [Lactobacillus pentosus KCA1]
gi|392436175|gb|EIW14092.1| Translation initiation factor 3 [Lactobacillus pentosus KCA1]
Length = 166
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYR+EQQKK++ +KK + +KE+++ ID +D++ +LK A KFL GDKV+V +
Sbjct: 58 GKYRFEQQKKEREARKKQKV--VSIKEVRLSPAIDTNDFNTKLKHAEKFLSKGDKVRVSI 115
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR ++I +++ R E ++ E D R++F++L P
Sbjct: 116 RFKGRAITHKDIGRQVLNRMIEATKEFSTVEAYPKMDGRSMFLVLAP 162
>gi|345861094|ref|ZP_08813370.1| translation initiation factor IF-3 [Desulfosporosinus sp. OT]
gi|344325822|gb|EGW37324.1| translation initiation factor IF-3 [Desulfosporosinus sp. OT]
Length = 143
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 56/106 (52%), Gaps = 3/106 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YEQ K+ K +KK M++KE+K+ NI+ HD+ + + A++FL DGDKVKV +
Sbjct: 35 GKYKYEQAKRDKEARKKQ--KNMEIKEVKLRPNIEDHDFETKARNAQRFLADGDKVKVTI 92
Query: 69 NLKGRENEFRNIAIELIRRFQNDV-GELASEENKNFRDRNIFIILV 113
+GRE + L R E E RN+ +IL
Sbjct: 93 MFRGREVTHPELGKTLCLRLAEFCKAECVVEREPKLEGRNMIMILA 138
>gi|291295603|ref|YP_003507001.1| translation initiation factor IF-3 [Meiothermus ruber DSM 1279]
gi|290470562|gb|ADD27981.1| translation initiation factor IF-3 [Meiothermus ruber DSM 1279]
Length = 173
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+RYEQQ+ +K +KK A R +LK +K+ I+ HDY+ +L R+FL++G KVKV +
Sbjct: 51 GKWRYEQQQAEKEARKK--AKRTELKSMKLRPKIETHDYNTKLSHIRRFLEEGHKVKVTI 108
Query: 69 NLKGRENEFRNIAIELIRRFQNDV-GELASEENKNFRDRNIFIILVPN 115
+GRE + + +L+ R D+ G E R++ +++ P
Sbjct: 109 MFRGREMAHQELGYKLLERVAKDLEGVGFVEMRPEMLGRDMNMVMAPG 156
>gi|282855602|ref|ZP_06264916.1| translation initiation factor IF-3 [Pyramidobacter piscolens W5455]
gi|282586532|gb|EFB91786.1| translation initiation factor IF-3 [Pyramidobacter piscolens W5455]
Length = 193
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 57/108 (52%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
KYRY+QQK+ K +KK LKE+KM ID+HDY + KA KFL+ G +VKV
Sbjct: 77 FGKYRYQQQKRDKDARKKQKVQA--LKEIKMRPKIDEHDYDFKTKAVVKFLESGHRVKVS 134
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE F + E+I R D + +E R + + VP
Sbjct: 135 IFFRGREMAFLDKGREVINRVAADCAAVGRMDEEPRMEGRYMRALFVP 182
>gi|421486021|ref|ZP_15933573.1| translation initiation factor IF-3 [Achromobacter piechaudii HLE]
gi|400195802|gb|EJO28786.1| translation initiation factor IF-3 [Achromobacter piechaudii HLE]
Length = 167
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 68/118 (57%), Gaps = 3/118 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++Y++QK++ + +S + +KE+K D+ DY V+L+ R+FL++GDK KV +
Sbjct: 48 GKFKYQEQKRQA--EARSKQKVIQVKEVKFRPATDEGDYQVKLRNLRRFLEEGDKAKVTL 105
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKALLQKAQEP 125
+GRE + + + ++ R ++D+ ELA E R + ++L P K + A +P
Sbjct: 106 RFRGREMAHQELGMRVLERVRDDLLELAQVEAMPKLEGRQMVMVLAPKKKAVPAAGKP 163
>gi|320531667|ref|ZP_08032608.1| translation initiation factor IF-3, partial [Actinomyces sp. oral
taxon 171 str. F0337]
gi|320136142|gb|EFW28149.1| translation initiation factor IF-3 [Actinomyces sp. oral taxon 171
str. F0337]
Length = 185
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE K + ++ A + LKE++ ID+HDY+ + +FLK GDKVK IV
Sbjct: 48 GKFKYESAMKARDARRNQANTQ--LKEIQFRPKIDEHDYATKRGHVERFLKGGDKVKCIV 105
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
+GRE + I L++ ++ EL + E+ +D RN+ ++L P
Sbjct: 106 RFRGREQSRPELGIRLLQGLAEEMAELGTIESHPRQDGRNMVMVLAP 152
>gi|365902902|ref|ZP_09440725.1| translation initiation factor IF-3 [Lactobacillus malefermentans
KCTC 3548]
Length = 167
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYR+E QKK++ +KK + +KE+++ ID +D++ +LK A+KFL G+KV+V +
Sbjct: 59 GKYRFEMQKKQREARKKQKV--VSIKEVRLSPTIDTNDFNTKLKNAKKFLAKGEKVRVSI 116
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I +++ R + ++A+ E + D R++F++L P
Sbjct: 117 RFKGRAITHKEIGRQVLNRMAEETNDVATVEQRPKMDGRSMFLMLSP 163
>gi|340357410|ref|ZP_08680026.1| translation initiation factor IF3 [Sporosarcina newyorkensis 2681]
gi|339617665|gb|EGQ22285.1| translation initiation factor IF3 [Sporosarcina newyorkensis 2681]
Length = 197
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+++EQQKK++ +K ++LKE+++ ID+HD+ +L+ KFL++GDKVK +
Sbjct: 88 GKFKFEQQKKEREVRKNQKI--INLKEVRLSPTIDEHDFQTKLRNGIKFLENGDKVKASI 145
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVP 114
+GR + I ++ RF E+A+ E K R++F+IL P
Sbjct: 146 RFRGRAITHKEIGQRVLDRFAEACKEVATVEVKPKMEGRSMFLILAP 192
>gi|400976514|ref|ZP_10803745.1| translation initiation factor IF-3 [Salinibacterium sp. PAMC 21357]
Length = 157
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 61/108 (56%), Gaps = 3/108 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE+ +K K + +++ N + LKE++ ID HDY + K A FL GDKVK ++
Sbjct: 19 GKFKYEEAQKAK-EARRNQTNTI-LKEVRFRLKIDTHDYETKRKRAEGFLAGGDKVKAMI 76
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPN 115
+GRE + + L+++F DV E S E RN+ +I+ P+
Sbjct: 77 LFRGREQSRPDQGVRLLQKFAEDVSEFGSIESTPTIDGRNMVMIIGPH 124
>gi|325962863|ref|YP_004240769.1| translation initiation factor 3 (bIF-3) [Arthrobacter
phenanthrenivorans Sphe3]
gi|323468950|gb|ADX72635.1| bacterial translation initiation factor 3 (bIF-3) [Arthrobacter
phenanthrenivorans Sphe3]
Length = 337
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YE K + + +K+ N + LKE++ ID HDY + A +FL GDKVK ++
Sbjct: 48 GKYKYEAAVKAR-EARKNQTNTV-LKEIRFRLKIDTHDYETKRGHALRFLGAGDKVKAMI 105
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILVPNK 116
+GRE + + I L++RF DV E+ E + RN+ +++ P K
Sbjct: 106 QFRGREQQRPEMGIRLLQRFAEDVAEVGVVESSPRIDGRNMVMVVGPLK 154
>gi|282881464|ref|ZP_06290138.1| translation initiation factor IF-3 [Prevotella timonensis CRIS
5C-B1]
gi|281304690|gb|EFA96776.1| translation initiation factor IF-3 [Prevotella timonensis CRIS
5C-B1]
Length = 232
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 67/114 (58%), Gaps = 3/114 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SK+ Y+Q+K+ K ++K ++D+KE++ G D+HDY +LK AR+FL +G++V+ V
Sbjct: 66 SKFLYQQKKRAKEMKQKQV--KVDIKEIRFGPQTDEHDYQFKLKHAREFLNEGNRVRAYV 123
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKALLQK 121
+GR F+ L+ RF ND+ + E+ + +FI L P + ++K
Sbjct: 124 FFRGRSILFKEQGEVLLLRFANDLEDFGKVEQMPKLEGKRMFIYLSPKQVGVEK 177
>gi|384917915|ref|ZP_10018016.1| translation initiation factor IF-3 [Citreicella sp. 357]
gi|384468219|gb|EIE52663.1| translation initiation factor IF-3 [Citreicella sp. 357]
Length = 225
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 61/108 (56%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
K++YE QK++ +KK +++KE+K D HDY V+++ KFL+ GDKVK+
Sbjct: 117 FGKFKYETQKRESEARKKQKI--IEVKEVKFRPGTDIHDYDVKMRNVFKFLEGGDKVKIT 174
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVP 114
+ +GRE +N+ EL+ R DV EL EN R + +++ P
Sbjct: 175 LRFRGREMAHQNLGRELLERVAADVKELGKVENMPKMEGRQMIMMIGP 222
>gi|110799853|ref|YP_696574.1| translation initiation factor IF-3 [Clostridium perfringens ATCC
13124]
gi|110674500|gb|ABG83487.1| translation initiation factor IF-3 [Clostridium perfringens ATCC
13124]
Length = 173
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 31 MDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQN 90
+ +KE+++ I++HD ++ K A+KFL+ GDKVK+ V +GRE E ++ ++++ F
Sbjct: 86 ISVKEIRVSPTIEKHDLEIKAKNAKKFLEAGDKVKITVRFRGREAEHSHVGVKILDSFLA 145
Query: 91 DVGELAS-EENKNFRDRNIFIILVPNKA 117
+ E+ S E+ RN+ +IL P KA
Sbjct: 146 QLEEVCSVEKPAKLEGRNMIMILAPKKA 173
>gi|86741868|ref|YP_482268.1| translation initiation factor IF-3 [Frankia sp. CcI3]
gi|86568730|gb|ABD12539.1| bacterial translation initiation factor 3 (bIF-3) [Frankia sp.
CcI3]
Length = 205
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE +K++ +K +KE+K+ ID HDY + +FL+ GDKVK+ +
Sbjct: 85 GKFKYESDQKRREARKNQVQT--VIKEMKLRPKIDPHDYETKKGHVVRFLRAGDKVKITI 142
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNKAL-LQKAQEP 125
+GRE + I L++R DV +L E + +D RN+ +++ P+K Q+ EP
Sbjct: 143 MFRGREQSRPELGIRLLQRLSADVADLGYVEAQPKQDGRNMTMVMAPHKGSKPQRVPEP 201
>gi|293604690|ref|ZP_06687090.1| translation initiation factor IF3 [Achromobacter piechaudii ATCC
43553]
gi|292816859|gb|EFF75940.1| translation initiation factor IF3 [Achromobacter piechaudii ATCC
43553]
Length = 167
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 68/118 (57%), Gaps = 3/118 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++Y++QK++ + +S + +KE+K D+ DY V+L+ R+FL++GDK KV +
Sbjct: 48 GKFKYQEQKRQA--EARSKQKVIQVKEVKFRPATDEGDYQVKLRNLRRFLEEGDKAKVTL 105
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKALLQKAQEP 125
+GRE + + + ++ R ++D+ ELA E R + ++L P K + A +P
Sbjct: 106 RFRGREMAHQELGMRVLERVRDDLLELAQVEAMPKLEGRQMVMVLAPKKKAVPAAGKP 163
>gi|365826334|ref|ZP_09368258.1| hypothetical protein HMPREF0975_00041 [Actinomyces sp. oral taxon
849 str. F0330]
gi|365266167|gb|EHM95880.1| hypothetical protein HMPREF0975_00041 [Actinomyces sp. oral taxon
849 str. F0330]
Length = 200
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE K + ++ A + LKE++ ID+HDY+ + +FLK GDKVK IV
Sbjct: 48 GKFKYESAMKARDARRNQANTQ--LKEIQFRPKIDEHDYATKRGHVERFLKGGDKVKCIV 105
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
+GRE + I L++ ++ EL + E+ +D RN+ ++L P
Sbjct: 106 RFRGREQSRPELGIRLLQGLAEEMAELGTIESHPRQDGRNMVMVLAP 152
>gi|456736816|gb|EMF61542.1| Translation initiation factor 3 [Stenotrophomonas maltophilia EPM1]
Length = 159
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+++E QKK +KK+ ++++KE+K D+ DY ++L+ R FL+DGDK+KV +
Sbjct: 51 GKFKFEAQKKASEAKKKT--KQVEIKEVKFRPVTDEGDYQIKLRKMRGFLEDGDKIKVNI 108
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGE-LASEENKNFRDRNIFIILVPNK 116
+GRE + + E+ R + D+GE + E R + +++ P K
Sbjct: 109 RFRGREMSHQELGREMANRIETDLGEDIVIESRPRLEGRQMVMMIAPKK 157
>gi|330467000|ref|YP_004404743.1| translation initiation factor if-3 [Verrucosispora maris AB-18-032]
gi|328809971|gb|AEB44143.1| translation initiation factor if-3 [Verrucosispora maris AB-18-032]
Length = 220
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 63/111 (56%), Gaps = 3/111 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE K + ++ + +KE+K+ ID HDY + +FLK GDKVKV +
Sbjct: 57 GKFKYESALKAREARRNQ--QQTVIKEMKLRPKIDPHDYETKKGHVVRFLKAGDKVKVTI 114
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNKAL 118
+GRE + L+RR ++++ EL E+ +D RN+ ++L P++A+
Sbjct: 115 MFRGREQSRPELGYRLLRRLESEITELGYVESAPKQDGRNMIMVLAPHRAV 165
>gi|329944515|ref|ZP_08292680.1| translation initiation factor IF-3 [Actinomyces sp. oral taxon 170
str. F0386]
gi|328530280|gb|EGF57159.1| translation initiation factor IF-3 [Actinomyces sp. oral taxon 170
str. F0386]
Length = 199
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE K + ++ A + LKE++ ID+HDY+ + +FLK GDKVK IV
Sbjct: 48 GKFKYESAMKARDARRNQANTQ--LKEIQFRPKIDEHDYATKRGHVERFLKGGDKVKCIV 105
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
+GRE + I L++ ++ EL + E+ +D RN+ ++L P
Sbjct: 106 RFRGREQSRPELGIRLLQGLAEEMAELGTIESHPRQDGRNMVMVLAP 152
>gi|227498536|ref|ZP_03928680.1| translation initiation factor IF-3 [Acidaminococcus sp. D21]
gi|352684285|ref|YP_004896270.1| translation initiation factor IF-3 [Acidaminococcus intestini
RyC-MR95]
gi|226903992|gb|EEH89910.1| translation initiation factor IF-3 [Acidaminococcus sp. D21]
gi|350278940|gb|AEQ22130.1| translation initiation factor IF-3 [Acidaminococcus intestini
RyC-MR95]
Length = 175
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 65/110 (59%), Gaps = 3/110 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YEQQK++K +K+ +D+KE+K+ I++HD+ V+ K A +FL+ GDKVK +
Sbjct: 67 GKYQYEQQKREKEARKRQKT--VDVKEVKLRIRIEEHDFDVKTKNAIRFLEGGDKVKATI 124
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVPNKA 117
+GRE + EL+ + + ++A E K RN+ +I+ P +
Sbjct: 125 MFRGRELTHPELGEELLNKMAVKLQDIAVIERKPKLEGRNMVMIVAPKSS 174
>gi|20532091|sp|Q8XJ67.2|IF3_CLOPE RecName: Full=Translation initiation factor IF-3
Length = 177
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 31 MDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQN 90
+ +KE+++ I++HD ++ K A+KFL+ GDKVK+ V +GRE E ++ ++++ F
Sbjct: 90 ISVKEIRVSPTIEKHDLEIKAKNAKKFLEAGDKVKITVRFRGREAEHSHVGVKILDSFLA 149
Query: 91 DVGELAS-EENKNFRDRNIFIILVPNKA 117
+ E+ S E+ RN+ +IL P KA
Sbjct: 150 QLEEVCSVEKPAKLEGRNMIMILAPKKA 177
>gi|392423571|ref|YP_006464565.1| bacterial translation initiation factor 3 (bIF-3)
[Desulfosporosinus acidiphilus SJ4]
gi|391353534|gb|AFM39233.1| bacterial translation initiation factor 3 (bIF-3)
[Desulfosporosinus acidiphilus SJ4]
Length = 171
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 59/106 (55%), Gaps = 3/106 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YEQ KK K +KK + M++KE+K+ NI+ HD+ + ++A++FL +GDKVKV +
Sbjct: 63 GKYKYEQAKKDKEARKKQKS--MEIKEVKLRPNIEDHDFETKARSAQRFLSEGDKVKVTI 120
Query: 69 NLKGRENEFRNIAIELIRRFQNDV-GELASEENKNFRDRNIFIILV 113
+GRE + L R E + E RN+ +IL
Sbjct: 121 MFRGREVTHPELGKTLCLRLAEFCKAESSIEREPKLEGRNMIMILA 166
>gi|357388468|ref|YP_004903307.1| putative translation initiation factor IF-3 [Kitasatospora setae
KM-6054]
gi|311894943|dbj|BAJ27351.1| putative translation initiation factor IF-3 [Kitasatospora setae
KM-6054]
Length = 229
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE K + + +K+ A+ + +KE+K+ ID HDY + +FLK GDKVK+ +
Sbjct: 48 GKFKYESAMKAR-EARKNQAHTV-IKEMKLRPKIDPHDYDTKKGHVVRFLKQGDKVKITI 105
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + L++R +DV EL E+ +D RN+ ++L P+K
Sbjct: 106 MFRGREQSRPELGFRLLQRLADDVQELGFVESAPKQDGRNMIMVLGPHK 154
>gi|297183197|gb|ADI19338.1| translation initiation factor 3 (if-3) [uncultured delta
proteobacterium HF0500_03A04]
Length = 155
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+Y+Q K+ ++ R LKE+K I++HDY +L+ A +FL DGDKVK+ V
Sbjct: 46 GKYKYQQSKRTHAAKQNQKITR--LKEVKFKPKIEEHDYQFKLRNALRFLDDGDKVKIKV 103
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
GR +++ L+ +F +VGE + E + RN+F+IL P
Sbjct: 104 VFYGRMMAHKDMGRVLLNKFLEEVGERSVVEQPIMDEGRNMFMILAP 150
>gi|168206055|ref|ZP_02632060.1| translation initiation factor IF-3 [Clostridium perfringens E str.
JGS1987]
gi|168215520|ref|ZP_02641145.1| translation initiation factor IF-3 [Clostridium perfringens NCTC
8239]
gi|169343705|ref|ZP_02864704.1| translation initiation factor IF-3 [Clostridium perfringens C str.
JGS1495]
gi|422346560|ref|ZP_16427474.1| translation initiation factor IF-3 [Clostridium perfringens
WAL-14572]
gi|422874811|ref|ZP_16921296.1| translation initiation factor IF-3 [Clostridium perfringens F262]
gi|169298265|gb|EDS80355.1| translation initiation factor IF-3 [Clostridium perfringens C str.
JGS1495]
gi|170662462|gb|EDT15145.1| translation initiation factor IF-3 [Clostridium perfringens E str.
JGS1987]
gi|182382354|gb|EDT79833.1| translation initiation factor IF-3 [Clostridium perfringens NCTC
8239]
gi|373226105|gb|EHP48432.1| translation initiation factor IF-3 [Clostridium perfringens
WAL-14572]
gi|380304452|gb|EIA16741.1| translation initiation factor IF-3 [Clostridium perfringens F262]
Length = 173
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 31 MDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQN 90
+ +KE+++ I++HD ++ K A+KFL+ GDKVK+ V +GRE E ++ ++++ F
Sbjct: 86 ISVKEIRVSPTIEKHDLEIKAKNAKKFLEAGDKVKITVRFRGREAEHSHVGVKILDSFLA 145
Query: 91 DVGELAS-EENKNFRDRNIFIILVPNKA 117
+ E+ S E+ RN+ +IL P KA
Sbjct: 146 QLEEVCSVEKPAKLEGRNMIMILAPKKA 173
>gi|224826513|ref|ZP_03699614.1| translation initiation factor IF-3 [Pseudogulbenkiania ferrooxidans
2002]
gi|347539114|ref|YP_004846539.1| translation initiation factor IF-3 [Pseudogulbenkiania sp. NH8B]
gi|224601114|gb|EEG07296.1| translation initiation factor IF-3 [Pseudogulbenkiania ferrooxidans
2002]
gi|345642292|dbj|BAK76125.1| translation initiation factor IF-3 [Pseudogulbenkiania sp. NH8B]
Length = 174
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YEQ KK+ + K ++ +KE+K D DY V+L+ +FL DGDK KV +
Sbjct: 67 GKFKYEQSKKR--HEAKLKQKQVQIKEVKFRPGTDDGDYGVKLRNLVRFLSDGDKAKVTL 124
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNK 116
+GRE ++I + L++R + D+ E+ + E+ R + +++ P K
Sbjct: 125 RFRGREMAHQDIGLALLKRVEADLAEVGTVEQFPRLEGRQMVMMIAPKK 173
>gi|298384717|ref|ZP_06994277.1| translation initiation factor IF-3 [Bacteroides sp. 1_1_14]
gi|298262996|gb|EFI05860.1| translation initiation factor IF-3 [Bacteroides sp. 1_1_14]
Length = 201
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SK+ Y+ +K++K Q+ K ++++KE++ G D HDY+ +LK AR FL+DGDKVK V
Sbjct: 67 SKFLYQLKKRQKEQKAKQV--KVNVKEIRFGPQTDDHDYNFKLKHARGFLEDGDKVKAYV 124
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA 96
KGR F+ L+ RF ND+ + A
Sbjct: 125 FFKGRSILFKEQGEVLLLRFANDLEDFA 152
>gi|154500000|ref|ZP_02038038.1| hypothetical protein BACCAP_03657 [Bacteroides capillosus ATCC
29799]
gi|150271598|gb|EDM98855.1| translation initiation factor IF-3 [Pseudoflavonifractor capillosus
ATCC 29799]
Length = 200
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 66/105 (62%), Gaps = 3/105 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+++EQQK++K +K +++KE++M ID +D++V+++ A+KFL DGD+VKV V
Sbjct: 88 GKFKFEQQKREKEARKNQRV--VEIKEVRMSPGIDVNDFNVKVRNAQKFLADGDRVKVTV 145
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIIL 112
+GRE I +L+ +F E+A+ +++ R++ I L
Sbjct: 146 RFRGREMAHTEIGKDLLLKFAEQCAEVATLDKDPKLDGRHMSIFL 190
>gi|444920798|ref|ZP_21240637.1| Translation initiation factor IF-3 [Wohlfahrtiimonas
chitiniclastica SH04]
gi|444508018|gb|ELV08191.1| Translation initiation factor IF-3 [Wohlfahrtiimonas
chitiniclastica SH04]
Length = 153
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+++EQQKK+ +KK ++ +KE+K D+ DY V+L+ +FL DGDK K+ +
Sbjct: 46 GKFKFEQQKKQHEARKKQ--KQIQVKEIKFRPGTDEGDYQVKLRNLIRFLSDGDKTKITL 103
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILVPNK 116
+GRE + + ++L+ R + D+ E E+ F R + ++L P K
Sbjct: 104 RFRGREMAHQELGMKLLNRVEEDLKEYGVVEQRPKFEGRQMVMVLAPAK 152
>gi|229820871|ref|YP_002882397.1| translation initiation factor IF-3 [Beutenbergia cavernae DSM
12333]
gi|229566784|gb|ACQ80635.1| translation initiation factor IF-3 [Beutenbergia cavernae DSM
12333]
Length = 192
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE K + +++ AN + LKE++ ID HDY + +FL GDKVKV++
Sbjct: 51 GKFKYESAMKAR-DARRNQANTV-LKEIRFRLKIDPHDYGTKKGHVERFLTAGDKVKVMI 108
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNK 116
+GRE + + L++R +DV EL E RN+ +++ P++
Sbjct: 109 MFRGREQSRPEMGMRLLQRLADDVAELGHVESTPRLDGRNMTMVIAPHR 157
>gi|255994770|ref|ZP_05427905.1| translation initiation factor IF-3 [Eubacterium saphenum ATCC
49989]
gi|255993483|gb|EEU03572.1| translation initiation factor IF-3 [Eubacterium saphenum ATCC
49989]
Length = 177
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++Y+QQK++K +KK + +KE+++ I++HD V+ K A KFL+ GDKVKV +
Sbjct: 70 GKFKYDQQKREKEARKKQKT--IQVKEIRLSAAIEEHDIDVKAKRACKFLEAGDKVKVTL 127
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
+GRE + +A ++ +F E E K D R + ++L+P
Sbjct: 128 RFRGRERSHKEVAYAVLEKFAKKAEEFGEIEKKPTMDGRALVMMLMP 174
>gi|422348595|ref|ZP_16429488.1| translation initiation factor IF-3 [Sutterella wadsworthensis
2_1_59BFAA]
gi|404659126|gb|EKB31984.1| translation initiation factor IF-3 [Sutterella wadsworthensis
2_1_59BFAA]
Length = 135
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+RY++QKK Q+ K+ + +KE+K D++D+ +L++ +FL DGDK KV +
Sbjct: 27 GKFRYQEQKK--AQEAKAKQKVIQVKEVKFRPVTDENDFQTKLRSLVRFLNDGDKAKVTL 84
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNK 116
+GRE + +EL+ R + ++ E+A E R + ++L P K
Sbjct: 85 RYRGREMAHQQFGMELMDRIRTELAEVAQVEHQPKLEGRQMIMVLAPKK 133
>gi|380512205|ref|ZP_09855612.1| translation initiation factor IF-3 [Xanthomonas sacchari NCPPB
4393]
Length = 155
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+++EQQKK +KK+ ++++KE+K D+ DY ++L+ R+F+++GDKVKV +
Sbjct: 48 GKFKFEQQKKANEAKKKT--KQVEIKEIKFRPVTDEGDYQIKLRNMRRFIEEGDKVKVNI 105
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGE-LASEENKNFRDRNIFIILVPNK 116
+GRE + + E+ R + D+GE + E R + +++ P K
Sbjct: 106 RFRGREMSHQELGREMAARIEADLGEDIVIESRPRLEGRQMVMMIAPKK 154
>gi|154249347|ref|YP_001410172.1| translation initiation factor IF-3 [Fervidobacterium nodosum
Rt17-B1]
gi|154153283|gb|ABS60515.1| translation initiation factor IF-3 [Fervidobacterium nodosum
Rt17-B1]
Length = 176
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YE K++ Q+ K +++KE+K I++HDY +LK ++FL +G+KVKV V
Sbjct: 69 GKYKYELAKRE--QKAKRNQKIIEVKEMKFRPVINEHDYQTKLKHIKRFLSEGNKVKVTV 126
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE F E++ R ND+ ++ S E+ R+++++L P
Sbjct: 127 MFRGRELAFVEKGKEILDRISNDIADIGSVEKEAKMEGRDMWMVLKP 173
>gi|400291876|ref|ZP_10793862.1| translation initiation factor IF-3 [Actinomyces naeslundii str.
Howell 279]
gi|399903013|gb|EJN85782.1| translation initiation factor IF-3 [Actinomyces naeslundii str.
Howell 279]
Length = 199
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE K + ++ A + LKE++ ID+HDY+ + +FLK GDKVK IV
Sbjct: 48 GKFKYESAMKARDARRNQANTQ--LKEIQFRPKIDEHDYATKRGHVERFLKGGDKVKCIV 105
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
+GRE + I L++ ++ EL + E+ +D RN+ ++L P
Sbjct: 106 RFRGREQSRPELGIRLLQGLAEEMAELGTIESHPRQDGRNMVMVLAP 152
>gi|383123015|ref|ZP_09943701.1| translation initiation factor IF-3 [Bacteroides sp. 1_1_6]
gi|251841893|gb|EES69973.1| translation initiation factor IF-3 [Bacteroides sp. 1_1_6]
Length = 201
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SK+ Y+ +K++K Q+ K ++++KE++ G D HDY+ +LK AR FL+DGDKVK V
Sbjct: 67 SKFLYQLKKRQKEQKAKQV--KVNVKEIRFGPQTDDHDYNFKLKHARGFLEDGDKVKAYV 124
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA 96
KGR F+ L+ RF ND+ + A
Sbjct: 125 FFKGRSILFKEQGEVLLLRFANDLEDFA 152
>gi|24211784|sp|Q8PJE2.1|IF3_XANAC RecName: Full=Translation initiation factor IF-3
Length = 182
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+++EQQKK +KK+ ++++KELK D+ DY ++L+ R+FL++GDKVKV +
Sbjct: 74 GKFKFEQQKKANEAKKKT--KQVEIKELKFRPVTDEGDYQIKLRNMRRFLEEGDKVKVNI 131
Query: 69 NLKGRENEFRNIAIELIRRFQNDVG-ELASEENKNFRDRNIFIILVPNK 116
+GRE + + E+ R + D+G ++ E R + +++ P K
Sbjct: 132 RFRGREMSHQELGREMAARIEADLGDDIVIESRPRLEGRQMVMMIAPKK 180
>gi|343522930|ref|ZP_08759896.1| translation initiation factor IF-3 [Actinomyces sp. oral taxon 175
str. F0384]
gi|343402339|gb|EGV14845.1| translation initiation factor IF-3 [Actinomyces sp. oral taxon 175
str. F0384]
Length = 199
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE K + ++ A + LKE++ ID+HDY+ + +FLK GDKVK IV
Sbjct: 48 GKFKYESAMKARDARRNQANTQ--LKEIQFRPKIDEHDYATKRGHVERFLKGGDKVKCIV 105
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
+GRE + I L++ ++ EL + E+ +D RN+ ++L P
Sbjct: 106 RFRGREQSRPELGIRLLQGLAEEMAELGTIESHPRQDGRNMVMVLAP 152
>gi|224539836|ref|ZP_03680375.1| hypothetical protein BACCELL_04746 [Bacteroides cellulosilyticus
DSM 14838]
gi|224518546|gb|EEF87651.1| hypothetical protein BACCELL_04746 [Bacteroides cellulosilyticus
DSM 14838]
Length = 198
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 67/120 (55%), Gaps = 3/120 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SK+ Y+ +K++K Q+ K ++++KE++ G D HDY+ +LK AR FL+DGDKVK V
Sbjct: 67 SKFLYQLKKRQKEQKAKQV--KVNVKEIRFGPQTDDHDYNFKLKHARGFLEDGDKVKAYV 124
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKALLQKAQEPPK 127
KGR F+ L+ RF ND+ + A ++ + + I L P K K PK
Sbjct: 125 FFKGRSILFKEQGEVLLLRFANDLEDYAKVDQMPILEGKRMTIQLSPKKKEAPKKSAAPK 184
>gi|29345833|ref|NP_809336.1| translation initiation factor IF-3 [Bacteroides thetaiotaomicron
VPI-5482]
gi|39931281|sp|Q8AAP1.1|IF3_BACTN RecName: Full=Translation initiation factor IF-3
gi|29337726|gb|AAO75530.1| translation initiation factor IF-3 [Bacteroides thetaiotaomicron
VPI-5482]
Length = 185
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SK+ Y+ +K++K Q+ K ++++KE++ G D HDY+ +LK AR FL+DGDKVK V
Sbjct: 67 SKFLYQLKKRQKEQKAKQV--KVNVKEIRFGPQTDDHDYNFKLKHARGFLEDGDKVKAYV 124
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA 96
KGR F+ L+ RF ND+ + A
Sbjct: 125 FFKGRSILFKEQGEVLLLRFANDLEDFA 152
>gi|357059670|ref|ZP_09120453.1| translation initiation factor IF-3 [Alloprevotella rava F0323]
gi|355377896|gb|EHG25101.1| translation initiation factor IF-3 [Alloprevotella rava F0323]
Length = 212
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 67/115 (58%), Gaps = 3/115 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SK+ Y+Q+K +K + K+ RM++KE++ G D HDY+ +LK A+ FL++G+KVK V
Sbjct: 67 SKFLYQQKKHQK--ELKAKQVRMEVKEIRFGPQTDDHDYNFKLKHAKGFLEEGNKVKAYV 124
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKALLQKA 122
+GR F+ L+ RF ND+ E E+ + + I + P K ++K+
Sbjct: 125 FFRGRSILFKEQGEVLLLRFANDLEEFGKVEQMPVLEGKRMTIFISPKKTPVKKS 179
>gi|345880785|ref|ZP_08832326.1| hypothetical protein HMPREF9431_00990 [Prevotella oulorum F0390]
gi|343922019|gb|EGV32727.1| hypothetical protein HMPREF9431_00990 [Prevotella oulorum F0390]
Length = 231
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 69/114 (60%), Gaps = 3/114 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SK+ Y+Q+K +K ++K ++++KE++ G D+HDY+ +LK A++FL+DG+KV+ V
Sbjct: 66 SKFLYQQKKHQKEIKQKQV--KVEVKEIRFGPQTDEHDYNFKLKHAKEFLEDGNKVRAYV 123
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKALLQK 121
+GR F+ L+ RF ND+ E E+ + +F+ + P K+ + K
Sbjct: 124 FFRGRSILFKEQGEVLLLRFANDLEEFGKVEQMPRLEGKKMFLFIAPKKSGVAK 177
>gi|440730357|ref|ZP_20910447.1| translation initiation factor IF-3 [Xanthomonas translucens
DAR61454]
gi|440379011|gb|ELQ15617.1| translation initiation factor IF-3 [Xanthomonas translucens
DAR61454]
Length = 136
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 65/110 (59%), Gaps = 3/110 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
K+++EQQKK +KK+ ++++KE+K D+ DY ++L+ R+FL++GDKVKV
Sbjct: 28 FGKFKFEQQKKANEAKKKT--KQVEIKEIKFRPVTDEGDYQIKLRNMRRFLEEGDKVKVN 85
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGE-LASEENKNFRDRNIFIILVPNK 116
+ +GRE + + ++ R + D+GE + E R + +++ P K
Sbjct: 86 IRFRGREMSHQELGRQMASRIEADLGEDIVIESRPRLEGRQMVMMIAPKK 135
>gi|433679725|ref|ZP_20511422.1| Translation initiation factor IF-3 [Xanthomonas translucens pv.
translucens DSM 18974]
gi|430815133|emb|CCP42029.1| Translation initiation factor IF-3 [Xanthomonas translucens pv.
translucens DSM 18974]
Length = 146
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+++EQQKK +KK+ ++++KE+K D+ DY ++L+ R+FL++GDKVKV +
Sbjct: 39 GKFKFEQQKKANEAKKKT--KQVEIKEIKFRPVTDEGDYQIKLRNMRRFLEEGDKVKVNI 96
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGE-LASEENKNFRDRNIFIILVPNK 116
+GRE + + ++ R + D+GE + E R + +++ P K
Sbjct: 97 RFRGREMSHQELGRQMASRIEADLGEDIVIESRPRLEGRQMVMMIAPKK 145
>gi|152967113|ref|YP_001362897.1| translation initiation factor IF-3 [Kineococcus radiotolerans
SRS30216]
gi|151361630|gb|ABS04633.1| translation initiation factor IF-3 [Kineococcus radiotolerans
SRS30216]
Length = 277
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE K + + +K+ +N + LKE++ ID HDY+ + +FLK GDKVKV++
Sbjct: 110 GKFKYESDMKAR-EARKNQSNTI-LKEIRFRLKIDPHDYATKKGHVERFLKAGDKVKVMI 167
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPN 115
+GRE + L++R DV +L E+ +D RN+ +++ P+
Sbjct: 168 MFRGREQSRPEMGFRLLQRLAEDVSDLGGVESSPRQDGRNMVMVIGPH 215
>gi|333374360|ref|ZP_08466238.1| translation initiation factor IF3 [Desmospora sp. 8437]
gi|332967751|gb|EGK06857.1| translation initiation factor IF3 [Desmospora sp. 8437]
Length = 166
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYRYEQ K++K +K + +KE++ +I++HD + +L+ +KFL +GDKVK+ +
Sbjct: 57 GKYRYEQSKREKEARKNQKT--IQIKEIRFSPSIEEHDVNTKLRNVKKFLSNGDKVKLTI 114
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNK 116
+GRE ++I ++ R +V E+ E R++ +IL P K
Sbjct: 115 RFRGREITHQDIGRRILNRMAEEVKEIGDVERYPKMEGRHMIMILSPKK 163
>gi|114319928|ref|YP_741611.1| translation initiation factor 3 [Alkalilimnicola ehrlichii MLHE-1]
gi|114226322|gb|ABI56121.1| bacterial translation initiation factor 3 (bIF-3) [Alkalilimnicola
ehrlichii MLHE-1]
Length = 146
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 67/110 (60%), Gaps = 3/110 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+++EQ KK + +KK ++ +KE+K D+ DY V+L+ R+FL+DGDK KV +
Sbjct: 38 GKFKFEQSKKAQAARKKQ--KQIQVKEVKFRPGTDEGDYKVKLRNLRRFLEDGDKAKVTL 95
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKA 117
+GRE +++ ++L+ R + D+ ++A+ ++ R + +++ P K
Sbjct: 96 RFRGREMAHQDLGLKLLNRVEQDLEDIATVDQRPKMEGRLMVMMMSPRKG 145
>gi|88608274|ref|YP_506184.1| translation initiation factor IF-3 [Neorickettsia sennetsu str.
Miyayama]
gi|88600443|gb|ABD45911.1| translation initiation factor IF-3 [Neorickettsia sennetsu str.
Miyayama]
Length = 189
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 66/108 (61%), Gaps = 4/108 (3%)
Query: 10 KYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVN 69
KY+YE +K+ +++K ++ +KE+++ +I D S +LK R+FL++ DKVKV+V
Sbjct: 81 KYKYEAKKESNLKRRKQKSS--TIKEVQLRQSIGAGDLSTKLKKIREFLQEEDKVKVVVR 138
Query: 70 LKGRENEFRNIAIELIRRFQNDVGELASEENKNF--RDRNIFIILVPN 115
L+GRE +N+AI L+ + +VG + K + N FIIL PN
Sbjct: 139 LRGREMTNKNLAINLLNKVVEEVGSEVGKLEKEIVQNNNNFFIILAPN 186
>gi|374992886|ref|YP_004968385.1| translation initiation factor IF-3 [Desulfosporosinus orientis DSM
765]
gi|357211252|gb|AET65870.1| translation initiation factor IF-3 [Desulfosporosinus orientis DSM
765]
Length = 178
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YEQ K+ K +KK + M++KE+K+ NI+ HD+ + + A++FL+DGDKVKV +
Sbjct: 70 GKYKYEQAKRDKEARKKQKS--MEIKEVKLRPNIEDHDFETKARNAQRFLQDGDKVKVTI 127
Query: 69 NLKGRENEFRNIAIELIRRFQNDV-GELASEENKNFRDRNIFIILVPNK 116
+GRE + L R E E RN+ +IL K
Sbjct: 128 MFRGREVTHPELGRTLCVRLAEFCKAESTIEREPKLEGRNMIMILASAK 176
>gi|160889628|ref|ZP_02070631.1| hypothetical protein BACUNI_02054 [Bacteroides uniformis ATCC 8492]
gi|270293970|ref|ZP_06200172.1| translation initiation factor IF-3 [Bacteroides sp. D20]
gi|317479177|ref|ZP_07938314.1| translation initiation factor IF-3 [Bacteroides sp. 4_1_36]
gi|423306043|ref|ZP_17284042.1| translation initiation factor IF-3 [Bacteroides uniformis
CL03T00C23]
gi|423309412|ref|ZP_17287402.1| translation initiation factor IF-3 [Bacteroides uniformis
CL03T12C37]
gi|156860620|gb|EDO54051.1| translation initiation factor IF-3 [Bacteroides uniformis ATCC
8492]
gi|270275437|gb|EFA21297.1| translation initiation factor IF-3 [Bacteroides sp. D20]
gi|316904665|gb|EFV26482.1| translation initiation factor IF-3 [Bacteroides sp. 4_1_36]
gi|392679600|gb|EIY72980.1| translation initiation factor IF-3 [Bacteroides uniformis
CL03T00C23]
gi|392685091|gb|EIY78410.1| translation initiation factor IF-3 [Bacteroides uniformis
CL03T12C37]
Length = 200
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 67/120 (55%), Gaps = 3/120 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SK+ Y+ +K++K Q+ K ++++KE++ G D HDY+ +LK A+ FL+DGDKVK V
Sbjct: 67 SKFLYQLKKRQKEQKAKQV--KVNVKEIRFGPQTDDHDYNFKLKHAKGFLEDGDKVKAYV 124
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKALLQKAQEPPK 127
KGR F+ L+ RF ND+ + A ++ + + I L P K K PK
Sbjct: 125 FFKGRSILFKEQGEVLLLRFANDLEDYAKVDQMPVLEGKRMTIQLSPKKVAAPKKSAAPK 184
>gi|393199935|ref|YP_006461777.1| translation initiation factor 3 [Solibacillus silvestris StLB046]
gi|406667462|ref|ZP_11075219.1| Translation initiation factor IF-3 [Bacillus isronensis B3W22]
gi|327439266|dbj|BAK15631.1| translation initiation factor 3 [Solibacillus silvestris StLB046]
gi|405384666|gb|EKB44108.1| Translation initiation factor IF-3 [Bacillus isronensis B3W22]
Length = 213
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++++QQKK + +K S + +KE+++ ID+HD+ +L+ A KFL+ GDKVK +
Sbjct: 105 GKFKFDQQKKDREIRKNSKV--IVMKEVRLSPTIDEHDFQTKLRNAIKFLEKGDKVKASI 162
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVP 114
KGR + I ++ RF E+++ E K R++F++L P
Sbjct: 163 RFKGRAITHKEIGQRVLDRFAEACAEVSTVEQKPKMEGRSMFLVLQP 209
>gi|254796674|ref|YP_003081510.1| translation initiation factor IF-3 [Neorickettsia risticii str.
Illinois]
gi|254589919|gb|ACT69281.1| translation initiation factor IF-3 [Neorickettsia risticii str.
Illinois]
Length = 155
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 70/111 (63%), Gaps = 8/111 (7%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YE +K+ +++K ++ +KE+++ +I D S +LK R+FL++ DKVKV+V
Sbjct: 46 GKYKYEAKKESNLKRRKQKSS--TVKEVQLRQSIGAGDLSTKLKKIREFLQEEDKVKVVV 103
Query: 69 NLKGRENEFRNIAIELIRR----FQNDVGELASEENKNFRDRNIFIILVPN 115
L+GRE +N+AI L+ + ++VG+L E +N + N FIIL PN
Sbjct: 104 RLRGREMTNKNLAINLLNKVVEEVGSEVGKLEKEVVQN--NNNFFIILAPN 152
>gi|84496738|ref|ZP_00995592.1| putative translation initiation factor [Janibacter sp. HTCC2649]
gi|84383506|gb|EAP99387.1| putative translation initiation factor [Janibacter sp. HTCC2649]
Length = 289
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YE K + + +K+ N + +KE+K+ ID HDY+ + +FL GDKVKV +
Sbjct: 48 GKYKYEAAMKAR-EARKNQVNTV-IKEIKLRPKIDPHDYATKKGHVVRFLGGGDKVKVTI 105
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + L+++ DV EL + E+ +D RN+ ++L P K
Sbjct: 106 MFRGREQSRPELGYRLLQKLAEDVIELGTVESAPKQDGRNMIMVLAPTK 154
>gi|304320891|ref|YP_003854534.1| translation initiation factor [Parvularcula bermudensis HTCC2503]
gi|303299793|gb|ADM09392.1| translation initiation factor [Parvularcula bermudensis HTCC2503]
Length = 174
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 31 MDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQN 90
+++KE+KM NID+HDY V+ KA R+F +GDKVKV + +GRE + +EL+ R +
Sbjct: 89 VEIKEIKMRPNIDKHDYEVKTKAMRRFFDEGDKVKVTLRFRGREMAHQERGMELLNRVRE 148
Query: 91 DV-GELASEENKNFRDRNIFIILVP 114
D G E R + ++L P
Sbjct: 149 DFEGTTKVEAMPKLEGRQMMMVLAP 173
>gi|328949634|ref|YP_004366969.1| translation initiation factor IF-3 [Marinithermus hydrothermalis
DSM 14884]
gi|328449958|gb|AEB10859.1| Translation initiation factor IF-3 [Marinithermus hydrothermalis
DSM 14884]
Length = 178
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+RYEQQ+ K +KK A R ++K +K I++HDY +L R+FL+ G KVKV +
Sbjct: 68 GKWRYEQQQALKEARKK--AKRQEMKAIKFRVKINEHDYQTKLGHVRRFLQQGHKVKVTI 125
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKN-FRDRNIFIILVP 114
+GRE + ++ R D+ +LA+ E K R++ ++L P
Sbjct: 126 MFRGREMAHPELGKRILDRVAEDLKDLATVEMKPVLAGRDMNMVLAP 172
>gi|387930074|ref|ZP_10132751.1| translation initiation factor 3 [Bacillus methanolicus PB1]
gi|387586892|gb|EIJ79216.1| translation initiation factor 3 [Bacillus methanolicus PB1]
Length = 167
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY++EQQKK++ +K +++KE+++ I++HD++ +L+ A KFL+ GDKVK +
Sbjct: 59 GKYKFEQQKKEREARKNQKI--INVKEVRLSPTIEEHDFNTKLRNAIKFLEKGDKVKASI 116
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I ++ RF ++A+ E+ D R++F++L P
Sbjct: 117 RFKGRAITHKEIGQRVLVRFAEACKDIATVESHPKMDGRSMFMVLAP 163
>gi|392947105|ref|ZP_10312747.1| translation initiation factor IF-3 [Frankia sp. QA3]
gi|392290399|gb|EIV96423.1| translation initiation factor IF-3 [Frankia sp. QA3]
Length = 298
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 62/110 (56%), Gaps = 3/110 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE +K++ +K + +KE+K+ ID HDY + +FL+ GDKVK+ +
Sbjct: 178 GKFKYESDQKRREARKNQV--QTVIKEMKLRPKIDPHDYETKKGHVVRFLRAGDKVKITI 235
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNKA 117
+GRE + I L++R DV +L E + +D RN+ +++ P+K
Sbjct: 236 MFRGREQSRPELGIRLLQRLSADVADLGYVEAQPKQDGRNMTMVMAPHKG 285
>gi|300767160|ref|ZP_07077072.1| translation initiation factor IF3 [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|308180380|ref|YP_003924508.1| translation initiation factor IF3 [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|448821046|ref|YP_007414208.1| Translation initiation factor IF-3 [Lactobacillus plantarum ZJ316]
gi|300494979|gb|EFK30135.1| translation initiation factor IF3 [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|308045871|gb|ADN98414.1| translation initiation factor IF3 [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|448274543|gb|AGE39062.1| Translation initiation factor IF-3 [Lactobacillus plantarum ZJ316]
Length = 166
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYR+EQQKK + +KK + +KE+++ ID +D++ +LK A KFL GDKV+V +
Sbjct: 58 GKYRFEQQKKDREARKKQKV--VSIKEVRLSPAIDTNDFNTKLKHAEKFLSKGDKVRVSI 115
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR ++I +++ R E ++ E D R++F++L P
Sbjct: 116 RFKGRAITHKDIGRQVLNRMIEATKEFSTVEAYPKMDGRSMFLVLAP 162
>gi|442804562|ref|YP_007372711.1| translation initiation factor IF-3 [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442740412|gb|AGC68101.1| translation initiation factor IF-3 [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 176
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY YE KK+K +KK A+ + +KE+++ I++HD++ + K A KFLKDGDKVK+ +
Sbjct: 67 GKYLYELAKKEKEAKKKQAS--ISVKEIRLSAKIEEHDFAFKAKNAIKFLKDGDKVKISI 124
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE ++ ++A ++I RF + E ENK D R++ + P K
Sbjct: 125 RFRGREMQYTSMAYDVIDRFAEMIKEYGKMENKPTMDGRSMSVTFAPIK 173
>gi|333029962|ref|ZP_08458023.1| Translation initiation factor IF-3 [Bacteroides coprosuis DSM
18011]
gi|332740559|gb|EGJ71041.1| Translation initiation factor IF-3 [Bacteroides coprosuis DSM
18011]
Length = 189
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 65/110 (59%), Gaps = 3/110 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
SK+ Y+ +K++K Q+ K A ++++KE++ G D HDY+ +LK A FL+DGDKVK
Sbjct: 81 FSKFIYQLKKRQKEQKAKQA--KVNVKEIRFGPQTDDHDYNFKLKHAISFLEDGDKVKAF 138
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNK 116
V +GR F+ L+ RF ND+ E A ++ + + ++L P K
Sbjct: 139 VFFRGRSIVFKEQGEVLLLRFANDLEEYAKVDQLPVLEGKRMILLLSPKK 188
>gi|254556436|ref|YP_003062853.1| translation initiation factor IF-3 [Lactobacillus plantarum JDM1]
gi|380032364|ref|YP_004889355.1| translation initiation factor IF-3 [Lactobacillus plantarum WCFS1]
gi|418275040|ref|ZP_12890452.1| translation initiation factor IF-3 [Lactobacillus plantarum subsp.
plantarum NC8]
gi|38257838|sp|Q88WU8.1|IF3_LACPL RecName: Full=Translation initiation factor IF-3
gi|254045363|gb|ACT62156.1| translation initiation factor IF-3 [Lactobacillus plantarum JDM1]
gi|342241607|emb|CCC78841.1| translation initiation factor IF-3 [Lactobacillus plantarum WCFS1]
gi|376009511|gb|EHS82839.1| translation initiation factor IF-3 [Lactobacillus plantarum subsp.
plantarum NC8]
Length = 173
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYR+EQQKK + +KK + +KE+++ ID +D++ +LK A KFL GDKV+V +
Sbjct: 65 GKYRFEQQKKDREARKKQKV--VSIKEVRLSPAIDTNDFNTKLKHAEKFLSKGDKVRVSI 122
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR ++I +++ R E ++ E D R++F++L P
Sbjct: 123 RFKGRAITHKDIGRQVLNRMIEATKEFSTVEAYPKMDGRSMFLVLAP 169
>gi|398818426|ref|ZP_10577017.1| translation initiation factor IF-3 [Brevibacillus sp. BC25]
gi|398027868|gb|EJL21398.1| translation initiation factor IF-3 [Brevibacillus sp. BC25]
Length = 168
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YEQ KK+K +K ++LKE++ NI++HD+ +L+ RKFL+D KVK +
Sbjct: 59 GKFKYEQAKKEKEARKNQKI--IELKEVRFSSNIEEHDFQTKLRNVRKFLEDQHKVKCSI 116
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVP 114
+GRE I + ++ R +LA+ E + R++ +IL P
Sbjct: 117 RFRGREITHSEIGLGVMERVAAQCEDLAAPERRPKIEGRSMIMILAP 163
>gi|297623447|ref|YP_003704881.1| translation initiation factor IF-3 [Truepera radiovictrix DSM
17093]
gi|297164627|gb|ADI14338.1| translation initiation factor IF-3 [Truepera radiovictrix DSM
17093]
Length = 181
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 69/121 (57%), Gaps = 6/121 (4%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYRYE Q+++K ++KS + ++K +K ID HDY ++ R+FLK G KVK+ +
Sbjct: 66 GKYRYELQQQEKEARRKS--RQQEMKAIKFRVKIDDHDYETKVNHVRRFLKGGHKVKLTI 123
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILVPNKALLQKAQEPPK 127
+GRE + E++ R +DV ++A E + ++ ++L P K+ A+E P+
Sbjct: 124 MFRGRERTHPELGQEILNRVASDVSDIAVVESAPSLAGMDMNMVLGPIKS---PAKESPQ 180
Query: 128 K 128
+
Sbjct: 181 R 181
>gi|326803828|ref|YP_004321646.1| translation initiation factor IF-3 [Aerococcus urinae
ACS-120-V-Col10a]
gi|326650733|gb|AEA00916.1| translation initiation factor IF-3 [Aerococcus urinae
ACS-120-V-Col10a]
Length = 111
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYRY+QQ+K + Q+K + +KE+++ ID++D+ +++ +KF+ GDKVKV +
Sbjct: 4 GKYRYQQQRKAREQRKNQKT--IQVKEIRLSPTIDENDFQTKVRQGKKFIDKGDKVKVSI 61
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVP 114
+GR +++ E++ RF +++ ++A+ E K R++ + L P
Sbjct: 62 RFRGRAITHKDLGREVLERFASELADVATVEQKPKMEGRSMQLQLAP 108
>gi|261855918|ref|YP_003263201.1| translation initiation factor IF-3 [Halothiobacillus neapolitanus
c2]
gi|261836387|gb|ACX96154.1| translation initiation factor IF-3 [Halothiobacillus neapolitanus
c2]
Length = 190
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 66/110 (60%), Gaps = 3/110 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++++Q KK +KK ++++KE+K + HDY V++++ +FL++GDKVK+ +
Sbjct: 82 GKFKFQQSKKLAEARKKQ--KQIEVKEIKFRPGTEDHDYQVKMRSILRFLEEGDKVKITL 139
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKA 117
+GRE + +A L+ R + D+ ELA+ E+ R + ++L P K
Sbjct: 140 RFRGREMAHKEVAGVLLDRIEQDLIELATVEQRPKMEGRQVTMVLSPKKT 189
>gi|410456546|ref|ZP_11310406.1| translation initiation factor IF-3 [Bacillus bataviensis LMG 21833]
gi|409927930|gb|EKN65055.1| translation initiation factor IF-3 [Bacillus bataviensis LMG 21833]
Length = 167
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+++E QKK+K +K + KE+++ ID+HD++ +L+ A KFL+ GDKVK +
Sbjct: 59 GKFKFENQKKEKEARKNQKI--ITTKEVRLSPTIDEHDFNTKLRNAIKFLEKGDKVKASI 116
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
KGR + I ++ RF E+A+ E + R++F++L P
Sbjct: 117 RFKGRAITHKEIGQRVLDRFSEACKEVATIESHPKMDGRSMFLVLAP 163
>gi|310815870|ref|YP_003963834.1| translation initiation factor 3 [Ketogulonicigenium vulgare Y25]
gi|385233384|ref|YP_005794726.1| translation initiation factor 3 (BIF-3) [Ketogulonicigenium vulgare
WSH-001]
gi|308754605|gb|ADO42534.1| translation initiation factor 3 [Ketogulonicigenium vulgare Y25]
gi|343462295|gb|AEM40730.1| Bacterial translation initiation factor 3 (BIF-3)
[Ketogulonicigenium vulgare WSH-001]
Length = 136
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 61/110 (55%), Gaps = 3/110 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YE QKK+ ++ +++KE+K N D HDY V++++ KFL +GDKVKV +
Sbjct: 28 GKYKYETQKKEAEARRNQKV--IEIKEVKFRPNTDTHDYDVKMRSVLKFLGEGDKVKVTL 85
Query: 69 NLKGRENEFRNIAIELIRRFQNDV-GELASEENKNFRDRNIFIILVPNKA 117
+GRE +++ +L+ R DV E E R + +++ P A
Sbjct: 86 RFRGREMAHQDLGRQLLDRVAEDVKAEGKVESMPKLEGRQMVMMIGPAPA 135
>gi|451940085|ref|YP_007460723.1| translation initiation factor IF-3 [Bartonella australis Aust/NH1]
gi|451899472|gb|AGF73935.1| translation initiation factor IF-3 [Bartonella australis Aust/NH1]
Length = 172
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 67/108 (62%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
L K +Y+ QKK + + +++KE+K+ N+D HDY V+L+A R+F+ +GDKVKV
Sbjct: 66 LGKLKYQNQKK--AAETRKKQKIIEIKEIKIRPNVDIHDYEVKLRAVRRFIDNGDKVKVT 123
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GRE +++ ++L++R + D E+A E R + +++VP
Sbjct: 124 LRFRGREMAHQDLGMKLLQRVKEDTNEIAKIESEPKLEGRQMVMVIVP 171
>gi|402836985|ref|ZP_10885516.1| translation initiation factor IF-3 [Mogibacterium sp. CM50]
gi|402270001|gb|EJU19270.1| translation initiation factor IF-3 [Mogibacterium sp. CM50]
Length = 154
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYRYE QKK K +K M +KE+++ I+ HD +V+ A KFLKDGDKVKV +
Sbjct: 46 GKYRYELQKKDKIAKKNQKT--MQVKEVRLSTFIEAHDVNVKANTAIKFLKDGDKVKVSL 103
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVP 114
+GRE ++ +++ F + V E + K F R++ + L P
Sbjct: 104 RFRGRERDYTAKGFDVMNSFADQVSEYGVIDKKPKFEGRSLTMFLSP 150
>gi|116495180|ref|YP_806914.1| translation initiation factor 3 [Lactobacillus casei ATCC 334]
gi|191638688|ref|YP_001987854.1| translation initiation factor IF-3 [Lactobacillus casei BL23]
gi|227534804|ref|ZP_03964853.1| translation initiation factor IF3 [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
gi|239632061|ref|ZP_04675092.1| translation initiation factor IF-3 [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|301066743|ref|YP_003788766.1| translation initiation factor 3 [Lactobacillus casei str. Zhang]
gi|385820402|ref|YP_005856789.1| translation initiation factor IF-3 [Lactobacillus casei LC2W]
gi|385823589|ref|YP_005859931.1| translation initiation factor IF-3 [Lactobacillus casei BD-II]
gi|417980890|ref|ZP_12621567.1| translation initiation factor 3 [Lactobacillus casei 12A]
gi|417983718|ref|ZP_12624354.1| translation initiation factor 3 [Lactobacillus casei 21/1]
gi|417987079|ref|ZP_12627641.1| translation initiation factor 3 [Lactobacillus casei 32G]
gi|417989974|ref|ZP_12630469.1| translation initiation factor 3 [Lactobacillus casei A2-362]
gi|417993221|ref|ZP_12633570.1| translation initiation factor 3 [Lactobacillus casei CRF28]
gi|417996565|ref|ZP_12636844.1| translation initiation factor 3 [Lactobacillus casei M36]
gi|417999436|ref|ZP_12639645.1| translation initiation factor 3 [Lactobacillus casei T71499]
gi|418003004|ref|ZP_12643107.1| translation initiation factor 3 [Lactobacillus casei UCD174]
gi|418005423|ref|ZP_12645416.1| translation initiation factor 3 [Lactobacillus casei UW1]
gi|418008298|ref|ZP_12648165.1| translation initiation factor 3 [Lactobacillus casei UW4]
gi|418011132|ref|ZP_12650898.1| translation initiation factor 3 [Lactobacillus casei Lc-10]
gi|418013184|ref|ZP_12652837.1| translation initiation factor 3 [Lactobacillus casei Lpc-37]
gi|116105330|gb|ABJ70472.1| bacterial translation initiation factor 3 (bIF-3) [Lactobacillus
casei ATCC 334]
gi|190712990|emb|CAQ66996.1| Translation initiation factor IF-3 [Lactobacillus casei BL23]
gi|227187560|gb|EEI67627.1| translation initiation factor IF3 [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
gi|239526526|gb|EEQ65527.1| translation initiation factor IF-3 [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|300439150|gb|ADK18916.1| Translation initiation factor 3 (IF-3) [Lactobacillus casei str.
Zhang]
gi|327382729|gb|AEA54205.1| Translation initiation factor IF-3 [Lactobacillus casei LC2W]
gi|327385916|gb|AEA57390.1| Translation initiation factor IF-3 [Lactobacillus casei BD-II]
gi|410523826|gb|EKP98745.1| translation initiation factor 3 [Lactobacillus casei 12A]
gi|410524143|gb|EKP99060.1| translation initiation factor 3 [Lactobacillus casei 32G]
gi|410527987|gb|EKQ02849.1| translation initiation factor 3 [Lactobacillus casei 21/1]
gi|410531693|gb|EKQ06409.1| translation initiation factor 3 [Lactobacillus casei CRF28]
gi|410535411|gb|EKQ10036.1| translation initiation factor 3 [Lactobacillus casei M36]
gi|410536796|gb|EKQ11387.1| translation initiation factor 3 [Lactobacillus casei A2-362]
gi|410539067|gb|EKQ13605.1| translation initiation factor 3 [Lactobacillus casei T71499]
gi|410542996|gb|EKQ17389.1| translation initiation factor 3 [Lactobacillus casei UCD174]
gi|410546820|gb|EKQ21064.1| translation initiation factor 3 [Lactobacillus casei UW1]
gi|410546976|gb|EKQ21219.1| translation initiation factor 3 [Lactobacillus casei UW4]
gi|410552769|gb|EKQ26783.1| translation initiation factor 3 [Lactobacillus casei Lc-10]
gi|410556131|gb|EKQ30053.1| translation initiation factor 3 [Lactobacillus casei Lpc-37]
Length = 154
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+E QKK++ +KK + +KE+++ I + D++ RLK A KFL+ GDKVKV V
Sbjct: 46 GKFRFELQKKERDARKKQ--KTVTIKEIRLSPTIGEADFNTRLKNATKFLEKGDKVKVSV 103
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
+GR +++ +++ + + V E+A+ E D R++F++L P
Sbjct: 104 RFRGRAITHKDLGRKVLEQMADAVKEIAAVETHPKMDGRSMFLMLAP 150
>gi|397670714|ref|YP_006512249.1| translation initiation factor IF-3 [Propionibacterium propionicum
F0230a]
gi|395142990|gb|AFN47097.1| translation initiation factor IF-3 [Propionibacterium propionicum
F0230a]
Length = 245
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 72/126 (57%), Gaps = 3/126 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE +K + +++ +N + KE+K+ ID HDY + +FLK GDKVK+ +
Sbjct: 82 GKFKYEAAQKAR-DARRNQSNTI-TKEMKLRLKIDNHDYETKKGHVVRFLKAGDKVKITI 139
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNKALLQKAQEPPK 127
+GRE + I+L++R +DV E E+ +D RN+ ++L P K + E +
Sbjct: 140 MFRGREQSRPELGIDLLKRLADDVAEHGFVESAPRQDGRNMLMVLGPTKKKTEARAEQAE 199
Query: 128 KKDKQV 133
++D+++
Sbjct: 200 ERDRRM 205
>gi|289523103|ref|ZP_06439957.1| translation initiation factor IF-3 [Anaerobaculum hydrogeniformans
ATCC BAA-1850]
gi|289503646|gb|EFD24810.1| translation initiation factor IF-3 [Anaerobaculum hydrogeniformans
ATCC BAA-1850]
Length = 168
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 68/125 (54%), Gaps = 7/125 (5%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYRY+QQK+ K +KK +KE+KM ID+HDY+ ++KA + FL G +VKV +
Sbjct: 47 GKYRYQQQKRDKEARKKQKVQ--TVKEIKMRPKIDEHDYNFKVKAIKDFLGSGHRVKVSI 104
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILVPNKALLQKAQEPPK 127
+GRE F + E++ R + D L ++ + R + ++L P +Q+ E
Sbjct: 105 FFRGREMAFLDKGREVLERVKKDCEGLGKADSDPKMEGRYMRMMLAP----IQQKSESKA 160
Query: 128 KKDKQ 132
KD Q
Sbjct: 161 AKDTQ 165
>gi|325288436|ref|YP_004264617.1| translation initiation factor 3 (bIF-3) [Syntrophobotulus
glycolicus DSM 8271]
gi|324963837|gb|ADY54616.1| bacterial translation initiation factor 3 (bIF-3) [Syntrophobotulus
glycolicus DSM 8271]
Length = 173
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 60/108 (55%), Gaps = 3/108 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YEQ KK K +KK +++KE+K+ NI+ HD+ + + A++FL+DGDKVKV +
Sbjct: 63 GKYKYEQAKKDKETRKKQKI--VEIKEVKLRPNIETHDFETKARNAQRFLQDGDKVKVTI 120
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPN 115
+GRE L R VG ++ E RN+ +IL P
Sbjct: 121 MFRGREIMHPEQGRVLCIRLAEFVGTDSTIEREPKVEGRNMVMILTPT 168
>gi|312113313|ref|YP_004010909.1| translation initiation factor IF-3 [Rhodomicrobium vannielii ATCC
17100]
gi|311218442|gb|ADP69810.1| translation initiation factor IF-3 [Rhodomicrobium vannielii ATCC
17100]
Length = 173
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+++ QKK +KK +++KE+K+ NID +DY+V++++ +KF ++GDKVKV +
Sbjct: 68 GKYKFQAQKKAAEARKKQKT--VEVKEIKLRPNIDTNDYNVKMRSIKKFFEEGDKVKVTL 125
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEE-NKNFRDRNIFIILVP 114
+GRE ++I ++L+ + + + +A E R + ++L P
Sbjct: 126 RFRGREMAHQDIGMQLLLQVKEETTAIAKVELEPRLEGRQMIMVLAP 172
>gi|340348244|ref|ZP_08671334.1| translation initiation factor IF3 [Prevotella dentalis DSM 3688]
gi|433653071|ref|YP_007296925.1| translation initiation factor IF-3 [Prevotella dentalis DSM 3688]
gi|339607515|gb|EGQ12449.1| translation initiation factor IF3 [Prevotella dentalis DSM 3688]
gi|433303604|gb|AGB29419.1| translation initiation factor IF-3 [Prevotella dentalis DSM 3688]
Length = 228
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 67/114 (58%), Gaps = 3/114 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SK+ Y+Q+K++K ++K ++++KE++ G D HDY +LK A++FL +G+KV+ V
Sbjct: 66 SKFLYQQKKRQKEMKQKQV--KVEVKEIRFGPQTDDHDYQFKLKHAKEFLDEGNKVRAYV 123
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKALLQK 121
+GR F+ L+ RF ND+ E A E+ + +F+ L P K + K
Sbjct: 124 FFRGRSILFKEQGEVLLLRFANDLEEYAKVEQLPKLEGKKMFLFLAPKKVGVTK 177
>gi|295696883|ref|YP_003590121.1| translation initiation factor IF-3 [Kyrpidia tusciae DSM 2912]
gi|295412485|gb|ADG06977.1| translation initiation factor IF-3 [Kyrpidia tusciae DSM 2912]
Length = 174
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 3/110 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YEQ K+ K ++ + LKE+++ NI+ HD+ +L+A +FL+ GDKVK V
Sbjct: 65 GKYKYEQSKRDKEARRNQKI--VSLKEVRLTPNIEDHDFQTKLRAVVRFLEQGDKVKATV 122
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILVPNKA 117
+GRE I ++ R +V L E RN+ +IL P ++
Sbjct: 123 RFRGREITHTRIGQGILERMAKEVENLCVVERPPKLEGRNMIMILAPKQS 172
>gi|354559944|ref|ZP_08979184.1| Translation initiation factor IF-3 [Desulfitobacterium
metallireducens DSM 15288]
gi|353539458|gb|EHC08944.1| Translation initiation factor IF-3 [Desulfitobacterium
metallireducens DSM 15288]
Length = 180
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 58/109 (53%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YEQ K+ K +KK ++KE+K+ NI+ HD+ + + A++FL DGDKVKV +
Sbjct: 72 GKYKYEQAKRDKEARKKQRTT--EIKEVKLRPNIEDHDFETKARNAQRFLADGDKVKVTI 129
Query: 69 NLKGRENEFRNIAIELIRRFQNDV-GELASEENKNFRDRNIFIILVPNK 116
+GRE + +L R E E RN+ +IL P K
Sbjct: 130 MFRGREVTHPELGKKLCVRLAEFCKAEANIEREPKLEGRNMIMILTPIK 178
>gi|374297301|ref|YP_005047492.1| translation initiation factor 3 (bIF-3) [Clostridium clariflavum
DSM 19732]
gi|359826795|gb|AEV69568.1| bacterial translation initiation factor 3 (bIF-3) [Clostridium
clariflavum DSM 19732]
Length = 173
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY +E KK+K +K + +KE+++ +I++HD+ ++K A +FLKDGDKVKV V
Sbjct: 67 GKYMFELSKKEKEARKNQKV--ISVKEIRLSASIEEHDFEFKVKNAIRFLKDGDKVKVSV 124
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVP 114
+GRE + ++ +++ +F V E S E K R++ +I+ P
Sbjct: 125 KFRGREMNYTDLGQQVLEKFAEAVKEYGSVEKKPKLEGRSMIMIINP 171
>gi|380695036|ref|ZP_09859895.1| translation initiation factor IF-3 [Bacteroides faecis MAJ27]
Length = 201
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SK+ Y+ +K++K Q+ K ++++KE++ G D HDY+ +LK AR FL+DGDKVK V
Sbjct: 67 SKFLYQLKKRQKEQKAKQV--KVNVKEIRFGPQTDDHDYNFKLKHARGFLEDGDKVKAYV 124
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA 96
KGR F+ L+ RF ND+ + A
Sbjct: 125 FFKGRSILFKEQGEVLLLRFANDLEDYA 152
>gi|300726433|ref|ZP_07059881.1| translation initiation factor IF-3 [Prevotella bryantii B14]
gi|299776281|gb|EFI72843.1| translation initiation factor IF-3 [Prevotella bryantii B14]
Length = 208
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 66/110 (60%), Gaps = 3/110 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SK+ Y+Q+K++K ++K ++++KE++ G D+HDY +LK A++FL++G+KV+ V
Sbjct: 69 SKFLYQQKKRQKEMKQKQV--KVEVKEIRFGPQTDEHDYQFKLKHAQEFLEEGNKVRAYV 126
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKA 117
+GR F+ L+ RF ND+ E E+ + +F+ + P K
Sbjct: 127 FFRGRSILFKEQGEVLLLRFANDLEEFGKVEQMPKLEGKKMFLYMAPKKV 176
>gi|339502998|ref|YP_004690418.1| translation initiation factor IF-3 [Roseobacter litoralis Och 149]
gi|338756991|gb|AEI93455.1| translation initiation factor IF-3 [Roseobacter litoralis Och 149]
Length = 164
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
K++YEQQK++ +KK +++KE+K N D +DY V+++ KFL++GDKVK+
Sbjct: 56 FGKFKYEQQKRESEARKKQKI--IEIKEVKFRPNTDTNDYDVKMRNVFKFLENGDKVKIT 113
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVP 114
+ +GRE +N+ EL+ R D E EN R + +++ P
Sbjct: 114 LRFRGREMAHQNLGRELLERVAEDTKEAGRVENFPKMEGRQMVMLIGP 161
>gi|377556238|ref|ZP_09785953.1| Translation initiation factor IF-3 [Lactobacillus gastricus PS3]
gi|376168661|gb|EHS87409.1| Translation initiation factor IF-3 [Lactobacillus gastricus PS3]
Length = 170
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 66/109 (60%), Gaps = 7/109 (6%)
Query: 9 SKYRYEQQKKKKGQQK--KSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKV 66
KYR+E QKK++ +K K+ A +KE+++ ID +D++V+L RKF++ GDKV+V
Sbjct: 59 GKYRFEMQKKERENRKNQKTTA----VKEIRLSPTIDTNDFNVKLSRVRKFIEKGDKVRV 114
Query: 67 IVNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+ +GR ++I ++I R + ++A+ E+ R++F+ L P
Sbjct: 115 SLRFRGRAITHKDIGRDMIERMAEETKDIATVEQRPKMEGRSMFLTLAP 163
>gi|238063946|ref|ZP_04608655.1| translation initiation factor IF-3 [Micromonospora sp. ATCC 39149]
gi|237885757|gb|EEP74585.1| translation initiation factor IF-3 [Micromonospora sp. ATCC 39149]
Length = 216
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE K + ++ + +KE+K+ ID HDY + +FLK GDKVKV +
Sbjct: 57 GKFKYESALKAREARRNQ--QQTVIKEMKLRPKIDPHDYETKKGHVVRFLKAGDKVKVTI 114
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNKAL 118
+GRE + L+RR ++++ EL E +D RN+ ++L P++A+
Sbjct: 115 MFRGREQSRPELGYRLLRRLESEITELGYVEAAPKQDGRNMIMVLAPHRAV 165
>gi|297182916|gb|ADI19065.1| translation initiation factor 3 (if-3) [uncultured delta
proteobacterium HF0070_15B21]
Length = 166
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 66/110 (60%), Gaps = 3/110 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
K++Y+Q KK+ ++ + LKE+KM I++HD+ +++ A +FL++GDKVKV
Sbjct: 56 FGKFKYQQSKKQHAARQNQKT--IHLKEVKMKPKIEEHDFQFKVRNALRFLEEGDKVKVN 113
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILVPNK 116
+ GR +++ + L+ +F+N +GE E+ R++F+I+ P K
Sbjct: 114 IMFFGRMMAHKDLGLVLMEKFENAIGEAGIVEQPVRNEGRSMFMIMAPPK 163
>gi|240146871|ref|ZP_04745472.1| translation initiation factor IF-3 [Roseburia intestinalis L1-82]
gi|257200969|gb|EEU99253.1| translation initiation factor IF-3 [Roseburia intestinalis L1-82]
gi|291536060|emb|CBL09172.1| bacterial translation initiation factor 3 (bIF-3) [Roseburia
intestinalis M50/1]
gi|291538553|emb|CBL11664.1| bacterial translation initiation factor 3 (bIF-3) [Roseburia
intestinalis XB6B4]
Length = 165
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 64/110 (58%), Gaps = 3/110 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYRYE +K+K +KK ++LKE+++ NID +D + ++ AA+KFL GDKVK+ +
Sbjct: 58 GKYRYELARKEKEARKKQKV--VELKEIRLSPNIDSNDLNTKMNAAKKFLSKGDKVKITL 115
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILVPNKA 117
+GRE N + ++ F + E+A E+ R+I ++L K+
Sbjct: 116 RFRGREMAHMNASKHILDDFAESLAEVAVVEKAPKVEGRSISMVLAEKKS 165
>gi|308176900|ref|YP_003916306.1| translation initiation factor IF-3 [Arthrobacter arilaitensis
Re117]
gi|307744363|emb|CBT75335.1| translation initiation factor IF-3 [Arthrobacter arilaitensis
Re117]
Length = 216
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 67/119 (56%), Gaps = 5/119 (4%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YE K + + +K+ N + LKE++ ID HDY ++ A +FL GDKVK ++
Sbjct: 51 GKYKYEAAVKAR-EARKNQTNTV-LKEVRFRLKIDTHDYETKVGHALRFLGAGDKVKAMI 108
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILVP--NKALLQKAQE 124
+GRE + + I L+ +F DV E+ E + RN+ +++ P NKA ++ Q+
Sbjct: 109 QFRGREQQRPEMGIRLLEKFAADVAEVGIIESSPRIDGRNMVMVVGPLKNKAEARREQQ 167
>gi|431792224|ref|YP_007219129.1| translation initiation factor 3 (bIF-3) [Desulfitobacterium
dichloroeliminans LMG P-21439]
gi|430782450|gb|AGA67733.1| bacterial translation initiation factor 3 (bIF-3)
[Desulfitobacterium dichloroeliminans LMG P-21439]
Length = 146
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YEQ K+ K +KK M++KE+K+ NI+ HD+ + + A++FL DGDKVKV +
Sbjct: 38 GKFKYEQAKRDKEARKKQKT--MEIKEVKLRPNIEDHDFETKARNAQRFLIDGDKVKVTI 95
Query: 69 NLKGRENEFRNIAIELIRRFQNDV-GELASEENKNFRDRNIFIILVPNK 116
+GRE + L R E E + RN+ +IL P K
Sbjct: 96 MFRGREITHPELGRVLCLRLAEFCKAEANIERDPKLEGRNMIMILTPLK 144
>gi|390629918|ref|ZP_10257909.1| Translation initiation factor IF-3 [Weissella confusa LBAE C39-2]
gi|390484883|emb|CCF30257.1| Translation initiation factor IF-3 [Weissella confusa LBAE C39-2]
Length = 153
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R++ QKK++ Q+K + +KE+++ ID +D++ + K A KFL+ G+KVKV +
Sbjct: 45 GKFRFDSQKKQREQRKNQKI--VSIKEVRLSPTIDDNDFNTKKKNAVKFLEKGNKVKVSI 102
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVP 114
+GR + I E++ RF D+ E+A E++ R++F++L P
Sbjct: 103 RFRGRAITHKEIGREVMDRFATDLEEIAKVESRAKMEGRSMFMVLAP 149
>gi|260892436|ref|YP_003238533.1| translation initiation factor IF-3 [Ammonifex degensii KC4]
gi|260864577|gb|ACX51683.1| translation initiation factor IF-3 [Ammonifex degensii KC4]
Length = 165
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YE K+ + +KK + +KE+K+ NI++HD+ V+ + +FLKDGDKVKV +
Sbjct: 48 GKYKYEMSKRDREARKKQ--RLVTVKEVKLRPNIEEHDFQVKARNVIRFLKDGDKVKVTI 105
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILVP 114
+GRE + L+ R + +V + E RN+ +IL P
Sbjct: 106 MFRGREIIHPQLGERLLERLKEEVAAVGVVERAPKLEGRNMVMILAP 152
>gi|359775354|ref|ZP_09278692.1| translation initiation factor IF-3 [Arthrobacter globiformis NBRC
12137]
gi|359307317|dbj|GAB12521.1| translation initiation factor IF-3 [Arthrobacter globiformis NBRC
12137]
Length = 296
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 60/108 (55%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
KY+YE K + + +K+ N + LKE++ ID HDY + A +FL GDKVK +
Sbjct: 3 FGKYKYEAAVKAR-EARKNQTNTV-LKEIRFRLKIDTHDYETKRGHALRFLGAGDKVKAM 60
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILVP 114
+ +GRE + + + L++RF DV E+ E + RN+ +++ P
Sbjct: 61 IQFRGREQQRPEMGLRLLQRFAEDVAEVGVVESSPRIDGRNMVMVIGP 108
>gi|462398|sp|P33319.1|IF3_PROHU RecName: Full=Translation initiation factor IF-3
gi|150892|gb|AAC36812.1| translation initiation factor IF3 [Proteus vulgaris]
Length = 179
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 63/110 (57%), Gaps = 4/110 (3%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+ YE+ K K Q+K+ + +KE+K D+ DY V+L+ +FL+DGDK KV +
Sbjct: 71 GKFLYEKSKTLKEQKKEQKV--IQVKEVKFRPGTDEGDYQVKLRNLIRFLEDGDKAKVTL 128
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEEN--KNFRDRNIFIILVPNK 116
+GRE + I +E++ R + D+ ELA+ E+ R + ++L P K
Sbjct: 129 RFRGREMAHQQIGMEVLNRIRQDLDELATVESFPNKIEGRQMIMVLAPKK 178
>gi|357414416|ref|YP_004926152.1| translation initiation factor IF-3 [Streptomyces flavogriseus ATCC
33331]
gi|320011785|gb|ADW06635.1| translation initiation factor IF-3 [Streptomyces flavogriseus ATCC
33331]
Length = 249
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE K + + +K+ A+ + +KE+K+ ID HDY + +FLK GDKVK+ +
Sbjct: 92 GKFKYESAMKAR-EARKNQAHTV-IKEMKLRPKIDPHDYDTKKGHVVRFLKQGDKVKITI 149
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILVPNK 116
+GRE + L++R +DV EL E N RN+ ++L P+K
Sbjct: 150 MFRGREQSRPELGFRLLQRLASDVEELGFIESNPKQDGRNMIMVLGPHK 198
>gi|260655004|ref|ZP_05860492.1| translation initiation factor IF-3 [Jonquetella anthropi E3_33 E1]
gi|424844861|ref|ZP_18269472.1| translation initiation factor IF-3 [Jonquetella anthropi DSM 22815]
gi|260630319|gb|EEX48513.1| translation initiation factor IF-3 [Jonquetella anthropi E3_33 E1]
gi|363986299|gb|EHM13129.1| translation initiation factor IF-3 [Jonquetella anthropi DSM 22815]
Length = 182
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 59/110 (53%), Gaps = 3/110 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYRY+QQK+ K +KK LKE+KM ID+HDY + +A KFL+ G +VKV V
Sbjct: 69 GKYRYQQQKRVKDARKKQKVQA--LKEMKMRPKIDEHDYDFKTRAIAKFLETGHRVKVSV 126
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVPNKA 117
+GRE F + +++ R DV E+ E + R + + P A
Sbjct: 127 FFRGREMAFLDKGRDVLNRVAADVAEVGRMEGEPRMEGRYMRAMFAPGGA 176
>gi|194246830|ref|YP_002004469.1| translation initiation factor IF-3 [Candidatus Phytoplasma mali]
gi|193807187|emb|CAP18628.1| Translation initiation factor IF-3 [Candidatus Phytoplasma mali]
Length = 185
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 71/117 (60%), Gaps = 5/117 (4%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SKYRY QQKK + +KK +++KE+++G NI +D+++++K +KFL DKVK+I+
Sbjct: 73 SKYRYNQQKKNREMKKKQK--NINVKEIRIGPNIGLNDFNIKVKNIQKFLSQDDKVKIIM 130
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILVPNKALLQKAQE 124
+GR + +E++++ ++ ++ +E I IIL+PNK L+K E
Sbjct: 131 RFRGRMIIHHKLGLEVLKKIITELRHISYTEMEPKLVGNQIIIILLPNK--LKKISE 185
>gi|190575250|ref|YP_001973095.1| translation initiation factor IF-3 [Stenotrophomonas maltophilia
K279a]
gi|344208233|ref|YP_004793374.1| translation initiation factor IF-3 [Stenotrophomonas maltophilia
JV3]
gi|424669562|ref|ZP_18106587.1| translation initiation factor IF-3 [Stenotrophomonas maltophilia
Ab55555]
gi|190013172|emb|CAQ46805.1| putative translation initiation factor IF-3 [Stenotrophomonas
maltophilia K279a]
gi|343779595|gb|AEM52148.1| Translation initiation factor IF-3 [Stenotrophomonas maltophilia
JV3]
gi|401071633|gb|EJP80144.1| translation initiation factor IF-3 [Stenotrophomonas maltophilia
Ab55555]
Length = 180
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+++E QKK +KK+ ++++KE+K D+ DY ++L+ R FL+DGDK+KV +
Sbjct: 72 GKFKFEAQKKASEAKKKT--KQVEIKEVKFRPVTDEGDYQIKLRKMRGFLEDGDKIKVNI 129
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGE-LASEENKNFRDRNIFIILVPNK 116
+GRE + + E+ R + D+GE + E R + +++ P K
Sbjct: 130 RFRGREMSHQELGREMANRIETDLGEDIVIESRPRLEGRQMVMMIAPKK 178
>gi|374622095|ref|ZP_09694623.1| translation initiation factor IF-3 [Ectothiorhodospira sp. PHS-1]
gi|373941224|gb|EHQ51769.1| translation initiation factor IF-3 [Ectothiorhodospira sp. PHS-1]
Length = 155
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+++E KK Q K ++ +KE+K D+ DY V+L+ +FL+ GDK KV +
Sbjct: 48 GKFKFEHSKKT--QAAKKNQKQVQIKEVKFRPGTDEGDYQVKLRNLNRFLEHGDKCKVTI 105
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNK 116
+GRE + + L+ R + D+GELA+ E+ R + +++ P K
Sbjct: 106 RFRGREMAHQELGARLLDRIEADLGELATVEQRPKMEGRQMIMVISPKK 154
>gi|406881624|gb|EKD29635.1| hypothetical protein ACD_78C00328G0002 [uncultured bacterium (gcode
4)]
Length = 168
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 62/106 (58%), Gaps = 6/106 (5%)
Query: 9 SKYRYEQQKKK-KGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
K+ ++QQK + KGQ KK+ D+K +K+ Y I HD +R A KF K+G +K+I
Sbjct: 64 GKFLFKQQKTQNKGQSKKT-----DIKTIKLTYKIGDHDLEIRRIQAVKFAKEGHPLKII 118
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRDRNIFIILV 113
++L+GREN + +IA+ + F + E+ + K + N F I++
Sbjct: 119 LSLRGRENRYEDIALSKVNEFVTSLAEVYKADGKVMKAGNNFSIVL 164
>gi|295395436|ref|ZP_06805635.1| translation initiation factor IF3 [Brevibacterium mcbrellneri ATCC
49030]
gi|294971758|gb|EFG47634.1| translation initiation factor IF3 [Brevibacterium mcbrellneri ATCC
49030]
Length = 245
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 65/110 (59%), Gaps = 3/110 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE +K + + +K+ AN M LKE++ ID HDY + +FL GDKVKV++
Sbjct: 98 GKFKYESAQKAR-EARKNQAN-MALKEIRFRLKIDDHDYETKKGHVSRFLSGGDKVKVMI 155
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNKA 117
+GRE + ++L+ + ++V +L + E+ D RN+ +++ P K+
Sbjct: 156 MFRGREQSRPEMGMKLLNKLADEVADLGTVESAPRVDGRNMVMVIAPVKS 205
>gi|379735857|ref|YP_005329363.1| translation initiation factor IF-3 [Blastococcus saxobsidens DD2]
gi|378783664|emb|CCG03332.1| Translation initiation factor IF-3 [Blastococcus saxobsidens DD2]
Length = 212
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE +K + ++ A +KE+++ ID HDY + +FLK GDKVK+ V
Sbjct: 76 GKFKYESAQKAREARRNQALT--VIKEMRLRLKIDPHDYETKKGHVERFLKSGDKVKITV 133
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + L++R DV EL E+ +D RN+ +++ P++
Sbjct: 134 MFRGREQSRPEMGYRLLQRLAADVSELGVVESNPKQDGRNMVMVIAPHR 182
>gi|417843313|ref|ZP_12489389.1| putative translation initiation factor 3-like protein [Haemophilus
haemolyticus M21127]
gi|341950074|gb|EGT76669.1| putative translation initiation factor 3-like protein [Haemophilus
haemolyticus M21127]
Length = 135
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 62/110 (56%), Gaps = 4/110 (3%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+ YE+ K K Q+K + +KE+K D+ DY V+L++ +FL+DGDK K+ V
Sbjct: 27 GKFLYEKSKTAKEQKKNQKV--VQVKEIKFRPGTDEGDYQVKLRSLIRFLEDGDKAKITV 84
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK--NFRDRNIFIILVPNK 116
+GRE ++I +++ R +ND+ E++ E+ R ++L P K
Sbjct: 85 RFRGREMAHQDIGFDVLERVKNDLAEISVVESAPGKLEGRQAVMVLAPKK 134
>gi|429726313|ref|ZP_19261114.1| translation initiation factor IF-3 [Prevotella sp. oral taxon 473
str. F0040]
gi|429146901|gb|EKX89939.1| translation initiation factor IF-3 [Prevotella sp. oral taxon 473
str. F0040]
Length = 274
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 67/115 (58%), Gaps = 3/115 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
SK+ Y+Q+K++K + K+ ++++KE++ G D HDY+ +LK A+ FL +GDKVK
Sbjct: 116 FSKFIYQQKKRQK--ELKAKQVKVEVKEIRFGPQTDDHDYNFKLKHAKGFLSEGDKVKAY 173
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELASEENKN-FRDRNIFIILVPNKALLQK 121
V +GR F+ L+ RF ND+ E E+ + + + L P KA ++K
Sbjct: 174 VFFRGRSILFKEQGEVLLLRFANDLEEYGKVESMPVLEGKRMTMYLAPKKAPVRK 228
>gi|380303131|ref|ZP_09852824.1| translation initiation factor 3 [Brachybacterium squillarum M-6-3]
Length = 121
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 38 MGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQNDVGELAS 97
MG ID HDY + + KFL GDKVKVI+ +GRE + I+L+ R DV E
Sbjct: 1 MGLKIDTHDYETKRRNVEKFLAGGDKVKVIIRFRGREQSRPEMGIKLLGRMAEDVAEYGF 60
Query: 98 EENKNFRD-RNIFIILVPNKALLQKAQEPPKKK 129
E+ +D RN+ +++ P+K Q E K+K
Sbjct: 61 VESHPRQDGRNMVMVMNPHKKKAQAMAEARKRK 93
>gi|408676914|ref|YP_006876741.1| Translation initiation factor 3 [Streptomyces venezuelae ATCC
10712]
gi|328881243|emb|CCA54482.1| Translation initiation factor 3 [Streptomyces venezuelae ATCC
10712]
Length = 257
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 58/109 (53%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE K + +K A +KE+K+ ID HDY + +FLK GDKVK+ +
Sbjct: 103 GKFKYESAMKAREARKNQAHT--VIKEMKLRPKIDPHDYDTKKGHVVRFLKQGDKVKITI 160
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILVPNK 116
+GRE + L++R +DV EL E N RN+ ++L P+K
Sbjct: 161 MFRGREQSRPELGFRLLQRLASDVEELGFIESNPKQDGRNMIMVLGPHK 209
>gi|126652713|ref|ZP_01724874.1| translation initiation factor IF-3 [Bacillus sp. B14905]
gi|126590562|gb|EAZ84680.1| translation initiation factor IF-3 [Bacillus sp. B14905]
Length = 167
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+++EQQKK + +K + +KE+++ +ID+HD+ +L+ A KFL+ GDKVK +
Sbjct: 59 GKFKFEQQKKDREIRKNQKV--IVMKEVRLSPSIDEHDFQTKLRNAIKFLEKGDKVKCSL 116
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVP 114
KGR ++I ++ RF E+++ E K R++F++L P
Sbjct: 117 RFKGRAITHKDIGQRVLDRFAEACAEVSTVEQKPKMEGRSMFLVLQP 163
>gi|46204953|ref|ZP_00049248.2| COG0290: Translation initiation factor 3 (IF-3) [Magnetospirillum
magnetotacticum MS-1]
Length = 181
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE K + + +++ AN + LKE++ ID HDY + +FL GDKVKV++
Sbjct: 4 GKFKYESDMKAR-EARRNQANTV-LKEIRFRLKIDPHDYGTKKGHVERFLAAGDKVKVMI 61
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + + L++R +DV EL E+ +D RN+ ++L P K
Sbjct: 62 MFRGREQSRPEMGVRLLQRLADDVAELGFVESMPKQDGRNMTMVLGPVK 110
>gi|409997547|ref|YP_006751948.1| translation initiation factor IF-3 [Lactobacillus casei W56]
gi|406358559|emb|CCK22829.1| Translation initiation factor IF-3 [Lactobacillus casei W56]
Length = 171
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+E QKK++ +KK + +KE+++ I + D++ RLK A KFL+ GDKVKV V
Sbjct: 63 GKFRFELQKKERDARKKQKT--VTIKEIRLSPTIGEADFNTRLKNATKFLEKGDKVKVSV 120
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
+GR +++ +++ + + V E+A+ E D R++F++L P
Sbjct: 121 RFRGRAITHKDLGRKVLEQMADAVKEIAAVETHPKMDGRSMFLMLAP 167
>gi|238021045|ref|ZP_04601471.1| hypothetical protein GCWU000324_00942 [Kingella oralis ATCC 51147]
gi|237868025|gb|EEP69031.1| hypothetical protein GCWU000324_00942 [Kingella oralis ATCC 51147]
Length = 155
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YEQ KK+ + K ++ +KE+K D DY+++++ R+FL DGDKVK+ +
Sbjct: 48 GKYKYEQSKKR--DEAKKKQKQVQIKEIKFRPGTDDGDYNIKMRKVREFLTDGDKVKITL 105
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVPNK 116
+GRE + I +L+ R + DV E A E+ R + ++L P K
Sbjct: 106 RFRGREMAHQQIGAQLLERVKADVAEEAQIESFPKLEGRQMVMMLAPKK 154
>gi|378823438|ref|ZP_09846072.1| translation initiation factor IF-3 [Sutterella parvirubra YIT
11816]
gi|378597742|gb|EHY30996.1| translation initiation factor IF-3 [Sutterella parvirubra YIT
11816]
Length = 135
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+RY++QKK Q+ K+ + +KE+K D++D+ +L++ +FL DGDK K+ +
Sbjct: 27 GKFRYQEQKK--AQEAKAKQKIVQVKEVKFRPATDENDFQTKLRSLERFLNDGDKAKITL 84
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNK 116
+GRE + ++L+ R + ++ E+A E R + ++L P K
Sbjct: 85 RFRGREMAHQQFGMQLMDRVREELAEIAQVEHAPKLEGRQMIMVLAPKK 133
>gi|379057025|ref|ZP_09847551.1| translation initiation factor 3 (bIF-3) [Serinicoccus profundi MCCC
1A05965]
Length = 190
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 3/108 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE K + + +K+ N + +KE+K+ ID HDY + +FLK GDKVKV +
Sbjct: 48 GKFKYEAAMKAR-EARKNQVNTV-IKEIKLRPKIDDHDYGTKKGHVVRFLKAGDKVKVTI 105
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPN 115
+GRE + L++R DV EL E+ RD RN+ ++L P
Sbjct: 106 MFRGREQSRPELGFRLLQRLAEDVIELGHVESAPKRDGRNMVMVLGPT 153
>gi|385871691|gb|AFI90211.1| Translation initiation factor IF-3 [Pectobacterium sp. SCC3193]
Length = 114
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 62/110 (56%), Gaps = 3/110 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+ YE+ K K +QK+ + +KE+K D DY V+L+ +FL+DGDK K+ +
Sbjct: 4 GKFLYEKSKATK-EQKEKNKKVIQVKEIKFRPGTDDGDYQVKLRNLIRFLEDGDKAKITL 62
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEEN--KNFRDRNIFIILVPNK 116
+GRE + I IE++ R ++D+ ELA E+ R + ++L P K
Sbjct: 63 RFRGREMAHQQIGIEVLNRVRDDLSELAVVESFPSKIEGRQMIMVLAPKK 112
>gi|163746608|ref|ZP_02153966.1| translation initiation factor IF-3 [Oceanibulbus indolifex HEL-45]
gi|161380493|gb|EDQ04904.1| translation initiation factor IF-3 [Oceanibulbus indolifex HEL-45]
Length = 137
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
K++YEQQK++ +KK +++KE+K N D +DY V+++ KFL+ GDKVK+
Sbjct: 28 FGKFKYEQQKRESEARKKQKI--IEIKEVKFRPNTDTNDYDVKMRNVFKFLEGGDKVKIT 85
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVP 114
+ +GRE +N+ EL+ R D ++ EN R + +++ P
Sbjct: 86 LRFRGREMAHQNLGRELLERVAADTKDIGRVENFPKMEGRQMVMVIGP 133
>gi|403736723|ref|ZP_10949684.1| translation initiation factor IF-3 [Austwickia chelonae NBRC
105200]
gi|403192818|dbj|GAB76454.1| translation initiation factor IF-3 [Austwickia chelonae NBRC
105200]
Length = 212
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YE K + + +K+ N + +KE+K+ ID HDY + +FL GDKVKV +
Sbjct: 48 GKYKYEAALKAR-EARKNQVNTV-IKEIKLRPKIDPHDYETKKGHVVRFLSAGDKVKVTI 105
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + L++R DV EL E+ +D RN+ ++L P K
Sbjct: 106 MFRGREQSRPELGFRLLQRLAQDVAELGFVESSPKQDGRNMIMVLGPTK 154
>gi|169829541|ref|YP_001699699.1| translation initiation factor IF-3 [Lysinibacillus sphaericus
C3-41]
gi|168994029|gb|ACA41569.1| Translation initiation factor IF-3 [Lysinibacillus sphaericus
C3-41]
Length = 167
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+++EQQKK + +K + +KE+++ ID+HD+ +L+ A KFL+ GDKVK +
Sbjct: 59 GKFKFEQQKKDREIRKNQKV--IVMKEVRLSPTIDEHDFQTKLRNAIKFLEKGDKVKCSL 116
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVP 114
KGR ++I ++ RF E+++ E K R++F++L P
Sbjct: 117 RFKGRAITHKDIGQRVLDRFAEACAEVSTVEQKPKMEGRSMFLVLQP 163
>gi|85858498|ref|YP_460700.1| translation initiation factor 3 [Syntrophus aciditrophicus SB]
gi|85721589|gb|ABC76532.1| translation initiation factor 3 (IF-3) [Syntrophus aciditrophicus
SB]
Length = 181
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+RY+Q KK Q + + + + +KE+++ +++HD V++K RKFL+ DKVKV V
Sbjct: 75 GKFRYQQSKKL--QVARKSQSTIQVKEIRLRPKVEEHDLQVKIKHIRKFLEQHDKVKVSV 132
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNK 116
+GRE F +I +L+ +N++G+ + ++ RN+ ++L P K
Sbjct: 133 LFRGREIAFTDIGRKLLEDIKNNLGDSCNIDQQPKLEGRNMVMVLSPKK 181
>gi|255262498|ref|ZP_05341840.1| translation initiation factor IF-3 [Thalassiobium sp. R2A62]
gi|255104833|gb|EET47507.1| translation initiation factor IF-3 [Thalassiobium sp. R2A62]
Length = 136
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 61/108 (56%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
K++YE QKK+ +KK +++KE+K N D +DY V+++ KFL++GDKVKV
Sbjct: 28 FGKFKYETQKKEAEARKKQKI--IEIKEVKFRPNTDTNDYDVKMRNVFKFLENGDKVKVT 85
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVP 114
+ +GRE +N+ EL+ R D E EN R + +++ P
Sbjct: 86 LRFRGREMAHQNLGRELLERVAEDTKEYGKVENFPKMEGRQMVMLIGP 133
>gi|161869663|ref|YP_001598830.1| translation initiation factor IF-3 [Neisseria meningitidis 053442]
gi|240013610|ref|ZP_04720523.1| translation initiation factor IF-3 [Neisseria gonorrhoeae DGI18]
gi|240016049|ref|ZP_04722589.1| translation initiation factor IF-3 [Neisseria gonorrhoeae FA6140]
gi|240120680|ref|ZP_04733642.1| translation initiation factor IF-3 [Neisseria gonorrhoeae PID24-1]
gi|161595216|gb|ABX72876.1| translation initiation factor IF-3 [Neisseria meningitidis 053442]
Length = 136
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+Y+Q KK+ + K ++ +KE+K D+ DY ++++ +FL DGDKVKV +
Sbjct: 29 GKYKYQQAKKR--DEAKKNQKQVQIKEIKFRPGTDEGDYQIKMRNINRFLADGDKVKVTL 86
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVPNK 116
+GRE + + +L+ R + D+ E+A E+ R + +++ P K
Sbjct: 87 RFRGREMAHQQLGAQLLERVKEDLAEVAQIESFPKMEGRQMVMMIAPKK 135
>gi|329118119|ref|ZP_08246831.1| translation initiation factor IF3 [Neisseria bacilliformis ATCC
BAA-1200]
gi|327465779|gb|EGF12052.1| translation initiation factor IF3 [Neisseria bacilliformis ATCC
BAA-1200]
Length = 134
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 62/110 (56%), Gaps = 3/110 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
KY+Y+Q KK+ + K ++ +KE+K D+ DY ++++ +FL DGDKVKV
Sbjct: 26 FGKYKYQQAKKR--DEAKKNQKQVQIKEIKFRPGTDEGDYQIKMRNINRFLADGDKVKVT 83
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNK 116
+ +GRE + + +L+ R + D+ E+A E+ R + +++ P K
Sbjct: 84 LRFRGREMAHQQLGAQLLERVKEDLAEVAQIEQFPKMEGRQMVMMIAPKK 133
>gi|269795538|ref|YP_003314993.1| translation initiation factor 3 [Sanguibacter keddieii DSM 10542]
gi|269097723|gb|ACZ22159.1| bacterial translation initiation factor 3 (bIF-3) [Sanguibacter
keddieii DSM 10542]
Length = 329
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE K + + +++ AN + LKE++ ID HDY + +FL GDKVKV++
Sbjct: 80 GKFKYESDMKAR-EARRNQANTV-LKEIRFRLKIDPHDYGTKKGHVERFLSAGDKVKVMI 137
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + + L++R DV EL E+ +D RN+ ++L P K
Sbjct: 138 MFRGREQSRPEMGVRLLQRLAEDVQELGFIESMPKQDGRNMIMVLGPTK 186
>gi|423224740|ref|ZP_17211208.1| translation initiation factor IF-3 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392634696|gb|EIY28611.1| translation initiation factor IF-3 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 213
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SK+ Y+ +K++K Q+ K ++++KE++ G D HDY+ +LK AR FL+DGDKVK V
Sbjct: 82 SKFLYQLKKRQKEQKAKQV--KVNVKEIRFGPQTDDHDYNFKLKHARGFLEDGDKVKAYV 139
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA 96
KGR F+ L+ RF ND+ + A
Sbjct: 140 FFKGRSILFKEQGEVLLLRFANDLEDYA 167
>gi|298293871|ref|YP_003695810.1| translation initiation factor IF-3 [Starkeya novella DSM 506]
gi|296930382|gb|ADH91191.1| translation initiation factor IF-3 [Starkeya novella DSM 506]
Length = 174
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
+++Y+ QKK +KK +++KE+K+ ID HDY V++KA +F +GDKVKV +
Sbjct: 69 GRFKYQNQKKANEARKKQHV--VEIKEIKLRPGIDTHDYDVKMKAIHRFFDEGDKVKVTL 126
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE + + +L+ + + ++ +A E + R + ++L P
Sbjct: 127 RFRGREMAHQELGYKLLNKVKEELATIAKVESEPSLEGRQMTMVLAP 173
>gi|115379014|ref|ZP_01466144.1| translation initiation factor IF-3 [Stigmatella aurantiaca DW4/3-1]
gi|115363988|gb|EAU63093.1| translation initiation factor IF-3 [Stigmatella aurantiaca DW4/3-1]
Length = 185
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 66/117 (56%), Gaps = 3/117 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE+ KKK + K A + LKE+K+ ++HDY +++ R+FL++G+K KV++
Sbjct: 35 GKFKYEE--KKKAAESKRAQVVIQLKEVKLRPKTEEHDYEFKVRNMRRFLEEGNKAKVVI 92
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILVPNKALLQKAQE 124
+GRE R ++ D+ ++ E+ R +F+IL P + Q+A+E
Sbjct: 93 QFRGREITHREQGTVILNDVAQDLKDVGVVEQPPRMEGRLMFMILAPTAKVAQRARE 149
>gi|320109032|ref|YP_004184622.1| translation initiation factor IF-3 [Terriglobus saanensis SP1PR4]
gi|319927553|gb|ADV84628.1| translation initiation factor IF-3 [Terriglobus saanensis SP1PR4]
Length = 181
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 5/121 (4%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY YE+ K + +KK + +KE+K +D+HDY + A +FL DGDKVK +
Sbjct: 38 GKYLYEKDKSDRAARKKQKV--IVIKEVKFSVTVDEHDYQTKKNMAVRFLGDGDKVKASL 95
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEE-NKNFRDRNIFIILVPNKALLQKAQEPPK 127
+GR+ R++ ++I R D+G+ E + I+ P K +A PPK
Sbjct: 96 RFRGRQMAHRDLGYKIINRLIMDIGDAGIVEFMPRMEGTTLHAIIAPTKK--AEAPAPPK 153
Query: 128 K 128
K
Sbjct: 154 K 154
>gi|296270015|ref|YP_003652647.1| translation initiation factor IF-3 [Thermobispora bispora DSM
43833]
gi|296092802|gb|ADG88754.1| translation initiation factor IF-3 [Thermobispora bispora DSM
43833]
Length = 199
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE K + ++ A + +KE+K+ ID HDY + +FL+ GDKVKV +
Sbjct: 63 GKWKYESAMKAREARRNQA--QTVVKEIKLRPKIDPHDYETKKGHVERFLRGGDKVKVTI 120
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + L++R DV EL E++ +D RN+ +++ P+K
Sbjct: 121 MFRGREQSRPELGYRLLQRLAEDVAELGYVESQPKQDGRNMIMVIGPHK 169
>gi|284045074|ref|YP_003395414.1| translation initiation factor IF-3 [Conexibacter woesei DSM 14684]
gi|283949295|gb|ADB52039.1| translation initiation factor IF-3 [Conexibacter woesei DSM 14684]
Length = 357
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 74/134 (55%), Gaps = 5/134 (3%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SKYRYEQ +K+K +K ++ ++E+K I Q+DY + +FLK DKVKV +
Sbjct: 75 SKYRYEQAQKQKAARKHQ--QQITIREIKFRPKIAQNDYDTKKGHVTRFLKHKDKVKVTI 132
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNKALLQKAQ--EP 125
+GRE L+ R ++ +LA E + +D RN+ ++L P+KA+L + +
Sbjct: 133 MFRGREVTHPERGQILLERLAEELADLAVVEQRPIQDGRNMTMMLGPSKAVLAEGEGGSA 192
Query: 126 PKKKDKQVVDEVST 139
P++ +K E ++
Sbjct: 193 PRRAEKGSAPEKAS 206
>gi|402570738|ref|YP_006620081.1| translation initiation factor 3 (bIF-3) [Desulfosporosinus meridiei
DSM 13257]
gi|402251935|gb|AFQ42210.1| bacterial translation initiation factor 3 (bIF-3)
[Desulfosporosinus meridiei DSM 13257]
Length = 178
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 3/106 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YEQ K+ K +KK + M++KE+K+ NI+ HD+ + + A++FL+DGDKVKV +
Sbjct: 70 GKYKYEQAKRDKEARKKQKS--MEIKEVKLRPNIEDHDFETKARNAQRFLQDGDKVKVTI 127
Query: 69 NLKGRENEFRNIAIELIRRFQNDV-GELASEENKNFRDRNIFIILV 113
+GRE + L R E E RN+ +IL
Sbjct: 128 MFRGREVTHPELGRALCIRLAEFCKAESTVEREPKLEGRNMIMILA 173
>gi|395216289|ref|ZP_10401265.1| translation initiation factor IF-3 [Pontibacter sp. BAB1700]
gi|394455441|gb|EJF09911.1| translation initiation factor IF-3 [Pontibacter sp. BAB1700]
Length = 174
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 68/122 (55%), Gaps = 10/122 (8%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SK++YEQ KKK ++ K+ A ++ +KE++ G N D HD+ +LK A+ FL+ G K+K V
Sbjct: 62 SKFKYEQ--KKKTREMKAKAQKVVIKEIRFGPNTDDHDFEFKLKHAKSFLESGFKIKSYV 119
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKALLQKAQEPPK 127
+ GR F+ L+ +F + ++A E+ + +F+IL P A PP
Sbjct: 120 HFVGRTIVFKERGEILLLKFAQALEDIAKVEQLPKLEGKRMFLILSPKVA-------PPA 172
Query: 128 KK 129
KK
Sbjct: 173 KK 174
>gi|430749280|ref|YP_007212188.1| translation initiation factor IF-3 [Thermobacillus composti KWC4]
gi|430733245|gb|AGA57190.1| translation initiation factor IF-3 [Thermobacillus composti KWC4]
Length = 187
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+RYEQQKK+K +K +D+KE+ NI++HDY V+ + KFL +G+KVK V
Sbjct: 77 GKFRYEQQKKEKEARKNQKI--VDVKEVWFRANIEEHDYQVKYRNVVKFLGEGNKVKASV 134
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVP 114
+GRE I ++ R +++V +L E R++ +IL P
Sbjct: 135 RFRGREITHAEIGQRILDRLRSEVADLCVVERVPKLEGRSMVMILAP 181
>gi|187477892|ref|YP_785916.1| translation initiation factor IF-3, partial [Bordetella avium 197N]
gi|115422478|emb|CAJ49003.1| translation initiation factor IF-3 [Bordetella avium 197N]
Length = 165
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++Y++QK++ + +S + +KE+K D+ DY V+L+ R+FL++GDK KV +
Sbjct: 48 GKFKYQEQKRQA--EARSKQKVIQVKEVKFRPATDEGDYQVKLRNLRRFLEEGDKAKVTL 105
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNK 116
+GRE + + + ++ R ++D+ ELA E R + ++L P K
Sbjct: 106 RFRGREMAHQELGMRVLERVRDDLTELAQVEAMPKLEGRQMVMVLAPKK 154
>gi|114776995|ref|ZP_01452015.1| Initiation factor 3 [Mariprofundus ferrooxydans PV-1]
gi|114552516|gb|EAU54976.1| Initiation factor 3 [Mariprofundus ferrooxydans PV-1]
Length = 178
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YEQ KK +K+ + M +KE+K+ + DQHD V+++ A++FL +G+KVKV +
Sbjct: 71 GKYKYEQSKKANAAKKRQ--HVMQIKEVKVRASTDQHDLDVKMRHAKQFLSEGNKVKVSL 128
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILVPNK 116
+GRE + ++ V E E+ N R + +IL P K
Sbjct: 129 RFRGREMAHTGQGLAQMKHVAELVAEFGKPEKMPNMEGRQMIMILAPLK 177
>gi|120611522|ref|YP_971200.1| translation initiation factor 3 [Acidovorax citrulli AAC00-1]
gi|120589986|gb|ABM33426.1| bacterial translation initiation factor 3 (bIF-3) [Acidovorax
citrulli AAC00-1]
Length = 173
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++Y++QK+ + K+ +++KE+K D DY+++L+ R+FL +GDK K+ +
Sbjct: 52 GKFKYQEQKR--AAEAKAKQTVIEIKEVKFRPGTDDGDYNIKLRNIRRFLAEGDKCKITL 109
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGE-LASEENKNFRDRNIFIILVPNK 116
+GRE + I + L+ R ++D+G+ + E+ R + +++ P K
Sbjct: 110 RFRGREITHQEIGLALLNRIRDDLGDTIVVEQFPKLEGRQMIMMIAPGK 158
>gi|329848409|ref|ZP_08263437.1| translation initiation factor IF-3 [Asticcacaulis biprosthecum C19]
gi|328843472|gb|EGF93041.1| translation initiation factor IF-3 [Asticcacaulis biprosthecum C19]
Length = 151
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R+++QKKK +KK +++KE+K+ NID HDY V+ KA +F ++GDKVKV +
Sbjct: 46 GKFRFQEQKKKAEARKKQKV--VEIKEIKLRPNIDIHDYEVKAKAMTRFFEEGDKVKVTL 103
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEE-NKNFRDRNIFIILVP 114
+GRE + ++L+ + + D E + + +IL P
Sbjct: 104 RFRGREMAHPELGMKLLNKVKADFEPTTKVEYEPRMEGKQMIMILAP 150
>gi|332637333|ref|ZP_08416196.1| translation initiation factor IF-3 [Weissella cibaria KACC 11862]
Length = 165
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+R++ QKK++ Q+K + +KE+++ ID +D++ + K A KFL+ G+KVKV +
Sbjct: 57 GKFRFDSQKKQREQRKNQKI--VSIKEVRLSPTIDDNDFNTKKKNAVKFLEKGNKVKVSI 114
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVP 114
+GR + I E++ RF D+ E+A E++ R++F++L P
Sbjct: 115 RFRGRAITHKEIGREVMDRFATDLEEIAKVESRAKMEGRSMFMVLAP 161
>gi|297183124|gb|ADI19267.1| hypothetical protein [uncultured delta proteobacterium
HF0200_39L23]
Length = 173
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 65/110 (59%), Gaps = 3/110 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
KY+Y+Q KK+ ++ + LKE+KM I++HD+ +++ +FL++GDKVKV
Sbjct: 64 FGKYKYQQSKKQHAARQNQKT--IHLKEVKMKPKIEEHDFQFKVRNTLRFLEEGDKVKVN 121
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILVPNK 116
+ GR +++ + L+ +F+N +GE E+ R++F+I+ P K
Sbjct: 122 IMFFGRMMAHKDLGLVLMEKFENAIGEAGIVEQPVRNEGRSMFMIMAPPK 171
>gi|158523053|ref|YP_001530923.1| initiation factor 3 [Desulfococcus oleovorans Hxd3]
gi|158511879|gb|ABW68846.1| initiation factor 3 [Desulfococcus oleovorans Hxd3]
Length = 139
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 59/107 (55%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
+Y+YEQ KK+ +KK A+ +KE+K+ D HD + ++ A RKFL DKVKV V
Sbjct: 33 GRYKYEQTKKQHEAKKKQAS--FQIKEIKVRPKTDTHDLNTKIGAMRKFLDRKDKVKVTV 90
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILVP 114
+GRE + L++ V ++A E F R++F+IL P
Sbjct: 91 FFRGREITLSAKGMNLLQEIAQQVEDVAVVEHAPRFEGRSLFMILAP 137
>gi|402308187|ref|ZP_10827196.1| translation initiation factor IF-3 [Prevotella sp. MSX73]
gi|400375631|gb|EJP28526.1| translation initiation factor IF-3 [Prevotella sp. MSX73]
Length = 178
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 71/118 (60%), Gaps = 4/118 (3%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SK+ Y+Q+K +K ++K ++++KE++ G D+HDY +LK A++FL +G+KV+ V
Sbjct: 18 SKFLYQQKKHQKEMKQKQV--KVEIKEIRFGPQTDEHDYQFKLKHAQEFLNEGNKVRAYV 75
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNK-ALLQKAQE 124
+GR F+ L+ RF ND+ E E+ + +F+ + P K +++K+Q+
Sbjct: 76 FFRGRSILFKEQGEVLLLRFANDLEEYGKVEQMPRLEGKKMFLYMAPKKTGVVKKSQQ 133
>gi|310825024|ref|YP_003957382.1| translation initiation factor IF-3 [Stigmatella aurantiaca DW4/3-1]
gi|309398096|gb|ADO75555.1| Translation initiation factor IF-3 [Stigmatella aurantiaca DW4/3-1]
Length = 196
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 66/117 (56%), Gaps = 3/117 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE+ KKK + K A + LKE+K+ ++HDY +++ R+FL++G+K KV++
Sbjct: 46 GKFKYEE--KKKAAESKRAQVVIQLKEVKLRPKTEEHDYEFKVRNMRRFLEEGNKAKVVI 103
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILVPNKALLQKAQE 124
+GRE R ++ D+ ++ E+ R +F+IL P + Q+A+E
Sbjct: 104 QFRGREITHREQGTVILNDVAQDLKDVGVVEQPPRMEGRLMFMILAPTAKVAQRARE 160
>gi|269126373|ref|YP_003299743.1| translation initiation factor IF-3 [Thermomonospora curvata DSM
43183]
gi|268311331|gb|ACY97705.1| translation initiation factor IF-3 [Thermomonospora curvata DSM
43183]
Length = 177
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE K + + +++ A+ + +KE+K+ ID HDY + +FLK GDKVKV +
Sbjct: 51 GKFKYESAMKAR-EARRNQAHTV-IKEIKLRPKIDPHDYETKKGHVVRFLKGGDKVKVTI 108
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + L++R +DV +L E++ +D RN+ +++ P+K
Sbjct: 109 MFRGREQSRPELGFRLLQRLADDVADLGFVESRPKQDGRNMIMVIGPHK 157
>gi|294670481|ref|ZP_06735361.1| hypothetical protein NEIELOOT_02199 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291307760|gb|EFE49003.1| hypothetical protein NEIELOOT_02199 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 142
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+Y+Q KK+ + K ++ +KE+K D+ DY ++++ +FL DGDKVKV +
Sbjct: 27 GKYKYQQAKKR--DEAKKNQKQVQIKEIKFRPGTDEGDYQIKMRNINRFLADGDKVKVTL 84
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVPNK 116
+GRE + + +L+ R + D+ E+A E+ R + +++ P K
Sbjct: 85 RFRGREMAHQQLGAQLLERVKEDLAEVAQIESFPKMEGRQMVMMIAPKK 133
>gi|198275236|ref|ZP_03207767.1| hypothetical protein BACPLE_01395 [Bacteroides plebeius DSM 17135]
gi|198271819|gb|EDY96089.1| translation initiation factor IF-3 [Bacteroides plebeius DSM 17135]
Length = 193
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SK+ Y Q KK+ +++K+ ++++KE++ G D+HDY+ +LK A FL+DGDKVK V
Sbjct: 67 SKFLY--QLKKRAKEQKAKQVKVNVKEIRFGPQTDEHDYNFKLKHAIGFLQDGDKVKAYV 124
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNK 116
KGR F+ L+ RF ND+ + A E+ + + I L P K
Sbjct: 125 FFKGRSILFKEQGEVLLLRFANDLEDYAKVEQMPLLEGKRMTISLSPKK 173
>gi|258404182|ref|YP_003196924.1| translation initiation factor IF-3 [Desulfohalobium retbaense DSM
5692]
gi|257796409|gb|ACV67346.1| translation initiation factor IF-3 [Desulfohalobium retbaense DSM
5692]
Length = 173
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+YEQ KK+ Q+ K ++ LKE+K D+HDY +++ ++FL+ GD+ KV +
Sbjct: 65 GKYQYEQ--KKRTQEAKKKQTQVQLKEVKFRPKTDEHDYQTKVRHIQRFLEKGDRCKVTI 122
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVP 114
+GRE ++ E++ R Q D+ E A E+ R + + L P
Sbjct: 123 FFRGREIVHKDRGQEILDRVQRDLAEEAKVEQQARVEGRTMSMTLAP 169
>gi|224023752|ref|ZP_03642118.1| hypothetical protein BACCOPRO_00468 [Bacteroides coprophilus DSM
18228]
gi|224016974|gb|EEF74986.1| hypothetical protein BACCOPRO_00468 [Bacteroides coprophilus DSM
18228]
Length = 194
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SK+ Y+ +K++K Q+ K ++++KE++ G D+HDY+ +LK A FL+DGDKVK V
Sbjct: 67 SKFLYQLKKRQKEQKAKQV--KVNVKEIRFGPQTDEHDYNFKLKHAIGFLQDGDKVKAYV 124
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEE 99
KGR F+ L+ RF ND+ E A E
Sbjct: 125 FFKGRSILFKEQGEVLLLRFANDLEEYAKVE 155
>gi|437999885|ref|YP_007183618.1| translation initiation factor IF-3 [Candidatus
Kinetoplastibacterium blastocrithidii (ex Strigomonas
culicis)]
gi|429339119|gb|AFZ83541.1| translation initiation factor IF-3 [Candidatus
Kinetoplastibacterium blastocrithidii (ex Strigomonas
culicis)]
Length = 161
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 66/112 (58%), Gaps = 3/112 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++Y++QK++ + K+ + +KE+K + D+ DY+V+LK R+FL DGDK KV +
Sbjct: 48 GKFKYKEQKRQA--EAKAKQKVIQVKEVKFRPSTDEGDYNVKLKNLRRFLDDGDKAKVTL 105
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILVPNKALL 119
+GRE + + + ++ R + D+ + A E R + ++L PNK ++
Sbjct: 106 RFRGREMAHQELGMRVLERIRKDLSDSAIVESMPRLEGRQMVMMLAPNKKMM 157
>gi|15676619|ref|NP_273763.1| translation initiation factor IF-3 [Neisseria meningitidis MC58]
gi|254493204|ref|ZP_05106375.1| translation initiation factor IF-3 [Neisseria gonorrhoeae 1291]
gi|268594344|ref|ZP_06128511.1| translation initiation factor IF-3 [Neisseria gonorrhoeae 35/02]
gi|268596340|ref|ZP_06130507.1| translation initiation factor IF-3 [Neisseria gonorrhoeae FA19]
gi|268598467|ref|ZP_06132634.1| translation initiation factor IF-3 [Neisseria gonorrhoeae MS11]
gi|268600820|ref|ZP_06134987.1| translation initiation factor IF-3 [Neisseria gonorrhoeae PID18]
gi|268603125|ref|ZP_06137292.1| translation initiation factor IF-3 [Neisseria gonorrhoeae PID1]
gi|268681606|ref|ZP_06148468.1| translation initiation factor IF-3 [Neisseria gonorrhoeae PID332]
gi|268683834|ref|ZP_06150696.1| translation initiation factor IF-3 [Neisseria gonorrhoeae
SK-92-679]
gi|268686075|ref|ZP_06152937.1| translation initiation factor IF-3 [Neisseria gonorrhoeae
SK-93-1035]
gi|291044370|ref|ZP_06570079.1| translation initiation factor IF-3 [Neisseria gonorrhoeae DGI2]
gi|293399556|ref|ZP_06643709.1| translation initiation factor IF-3 [Neisseria gonorrhoeae F62]
gi|313668801|ref|YP_004049085.1| translation initiation factor IF-3 [Neisseria lactamica 020-06]
gi|385324523|ref|YP_005878962.1| translation initiation factor IF-3 [Neisseria meningitidis 8013]
gi|385851614|ref|YP_005898129.1| translation initiation factor IF-3 [Neisseria meningitidis
M04-240196]
gi|385856876|ref|YP_005903388.1| translation initiation factor IF-3 [Neisseria meningitidis
NZ-05/33]
gi|416178773|ref|ZP_11610730.1| translation initiation factor IF-3 [Neisseria meningitidis M6190]
gi|416188273|ref|ZP_11614742.1| translation initiation factor IF-3 [Neisseria meningitidis M0579]
gi|416197452|ref|ZP_11618662.1| translation initiation factor IF-3 [Neisseria meningitidis CU385]
gi|416214019|ref|ZP_11622682.1| translation initiation factor IF-3 [Neisseria meningitidis
M01-240013]
gi|418287932|ref|ZP_12900462.1| translation initiation factor IF-3 [Neisseria meningitidis NM233]
gi|418290194|ref|ZP_12902368.1| translation initiation factor IF-3 [Neisseria meningitidis NM220]
gi|7225947|gb|AAF41134.1| translation initiation factor 3 [Neisseria meningitidis MC58]
gi|226512244|gb|EEH61589.1| translation initiation factor IF-3 [Neisseria gonorrhoeae 1291]
gi|261392910|emb|CAX50491.1| translation initiation factor IF-3 [Neisseria meningitidis 8013]
gi|268547733|gb|EEZ43151.1| translation initiation factor IF-3 [Neisseria gonorrhoeae 35/02]
gi|268550128|gb|EEZ45147.1| translation initiation factor IF-3 [Neisseria gonorrhoeae FA19]
gi|268582598|gb|EEZ47274.1| translation initiation factor IF-3 [Neisseria gonorrhoeae MS11]
gi|268584951|gb|EEZ49627.1| translation initiation factor IF-3 [Neisseria gonorrhoeae PID18]
gi|268587256|gb|EEZ51932.1| translation initiation factor IF-3 [Neisseria gonorrhoeae PID1]
gi|268621890|gb|EEZ54290.1| translation initiation factor IF-3 [Neisseria gonorrhoeae PID332]
gi|268624118|gb|EEZ56518.1| translation initiation factor IF-3 [Neisseria gonorrhoeae
SK-92-679]
gi|268626359|gb|EEZ58759.1| translation initiation factor IF-3 [Neisseria gonorrhoeae
SK-93-1035]
gi|291011264|gb|EFE03260.1| translation initiation factor IF-3 [Neisseria gonorrhoeae DGI2]
gi|291610125|gb|EFF39247.1| translation initiation factor IF-3 [Neisseria gonorrhoeae F62]
gi|313006263|emb|CBN87725.1| putative translation initiation factor IF-3 [Neisseria lactamica
020-06]
gi|325131826|gb|EGC54526.1| translation initiation factor IF-3 [Neisseria meningitidis M6190]
gi|325136056|gb|EGC58666.1| translation initiation factor IF-3 [Neisseria meningitidis M0579]
gi|325140124|gb|EGC62653.1| translation initiation factor IF-3 [Neisseria meningitidis CU385]
gi|325144076|gb|EGC66384.1| translation initiation factor IF-3 [Neisseria meningitidis
M01-240013]
gi|325206437|gb|ADZ01890.1| translation initiation factor IF-3 [Neisseria meningitidis
M04-240196]
gi|325207765|gb|ADZ03217.1| translation initiation factor IF-3 [Neisseria meningitidis
NZ-05/33]
gi|372202039|gb|EHP15902.1| translation initiation factor IF-3 [Neisseria meningitidis NM220]
gi|372202868|gb|EHP16628.1| translation initiation factor IF-3 [Neisseria meningitidis NM233]
Length = 155
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+Y+Q KK+ + K ++ +KE+K D+ DY ++++ +FL DGDKVKV +
Sbjct: 48 GKYKYQQAKKR--DEAKKNQKQVQIKEIKFRPGTDEGDYQIKMRNINRFLADGDKVKVTL 105
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVPNK 116
+GRE + + +L+ R + D+ E+A E+ R + +++ P K
Sbjct: 106 RFRGREMAHQQLGAQLLERVKEDLAEVAQIESFPKMEGRQMVMMIAPKK 154
>gi|298369383|ref|ZP_06980701.1| translation initiation factor IF-3 [Neisseria sp. oral taxon 014
str. F0314]
gi|298283386|gb|EFI24873.1| translation initiation factor IF-3 [Neisseria sp. oral taxon 014
str. F0314]
Length = 155
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+Y+Q KK+ + K ++ +KE+K D+ DY ++++ +FL DGDKVKV +
Sbjct: 48 GKYKYQQAKKR--DEAKKNQKQVQIKEIKFRPGTDEGDYQIKMRNINRFLADGDKVKVTL 105
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVPNK 116
+GRE + + +L+ R + D+ E+A E+ R + +++ P K
Sbjct: 106 RFRGREMAHQQLGAQLLERVKEDLAEVAQIESFPKMEGRQMVMMIAPKK 154
>gi|15606839|ref|NP_214219.1| translation initiation factor IF-3 [Aquifex aeolicus VF5]
gi|6016323|sp|O67653.1|IF3_AQUAE RecName: Full=Translation initiation factor IF-3
gi|2984082|gb|AAC07621.1| initiation factor IF-3 [Aquifex aeolicus VF5]
Length = 175
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 71/109 (65%), Gaps = 1/109 (0%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE +KK++ +KK +++++K+++M ID+HD V+LK R+FL++GDKVKV +
Sbjct: 65 GKFKYELKKKEREARKKQREHQIEVKDIRMKVRIDEHDLQVKLKHMREFLEEGDKVKVWL 124
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRDRNIFI-ILVPNK 116
+GREN + + +L R N++ ++A E + ++ N I +L P +
Sbjct: 125 RFRGRENIYPELGKKLAERIINELSDIAEVEVQPKKEGNFMIFVLAPKR 173
>gi|194098021|ref|YP_002001069.1| translation initiation factor 3 [Neisseria gonorrhoeae NCCP11945]
gi|254804602|ref|YP_003082823.1| translation initiation factor IF-3 [Neisseria meningitidis alpha14]
gi|269214427|ref|ZP_05986527.2| translation initiation factor IF-3 [Neisseria lactamica ATCC 23970]
gi|304387977|ref|ZP_07370149.1| translation initiation factor IF3 [Neisseria meningitidis ATCC
13091]
gi|385328058|ref|YP_005882361.1| putative translation initiation factor IF-3 [Neisseria meningitidis
alpha710]
gi|385335220|ref|YP_005889167.1| translation initiation factor 3 [Neisseria gonorrhoeae
TCDC-NG08107]
gi|385337676|ref|YP_005891549.1| translation initiation factor IF-3 [Neisseria meningitidis WUE
2594]
gi|385339696|ref|YP_005893568.1| translation initiation factor IF-3 [Neisseria meningitidis G2136]
gi|385342277|ref|YP_005896148.1| translation initiation factor IF-3 [Neisseria meningitidis
M01-240149]
gi|385853591|ref|YP_005900105.1| translation initiation factor IF-3 [Neisseria meningitidis H44/76]
gi|385854867|ref|YP_005901380.1| translation initiation factor IF-3 [Neisseria meningitidis
M01-240355]
gi|416163134|ref|ZP_11606924.1| translation initiation factor IF-3 [Neisseria meningitidis N1568]
gi|416183883|ref|ZP_11612789.1| translation initiation factor IF-3 [Neisseria meningitidis M13399]
gi|416192709|ref|ZP_11616815.1| translation initiation factor IF-3 [Neisseria meningitidis ES14902]
gi|421537673|ref|ZP_15983856.1| translation initiation factor IF-3 [Neisseria meningitidis 93003]
gi|421539900|ref|ZP_15986053.1| translation initiation factor IF-3 [Neisseria meningitidis 93004]
gi|421542129|ref|ZP_15988239.1| translation initiation factor IF-3 [Neisseria meningitidis NM255]
gi|421544095|ref|ZP_15990173.1| translation initiation factor IF-3 [Neisseria meningitidis NM140]
gi|421546205|ref|ZP_15992254.1| translation initiation factor IF-3 [Neisseria meningitidis NM183]
gi|421548474|ref|ZP_15994499.1| translation initiation factor IF-3 [Neisseria meningitidis NM2781]
gi|421550274|ref|ZP_15996279.1| translation initiation factor IF-3 [Neisseria meningitidis 69166]
gi|421552499|ref|ZP_15998473.1| translation initiation factor IF-3 [Neisseria meningitidis NM576]
gi|421554484|ref|ZP_16000425.1| translation initiation factor IF-3 [Neisseria meningitidis 98008]
gi|421556947|ref|ZP_16002856.1| translation initiation factor IF-3 [Neisseria meningitidis 80179]
gi|421558554|ref|ZP_16004432.1| translation initiation factor IF-3 [Neisseria meningitidis 92045]
gi|421560898|ref|ZP_16006751.1| translation initiation factor IF-3 [Neisseria meningitidis NM2657]
gi|421562946|ref|ZP_16008768.1| translation initiation factor IF-3 [Neisseria meningitidis NM2795]
gi|421565041|ref|ZP_16010827.1| translation initiation factor IF-3 [Neisseria meningitidis NM3081]
gi|421567167|ref|ZP_16012903.1| translation initiation factor IF-3 [Neisseria meningitidis NM3001]
gi|421906519|ref|ZP_16336412.1| Translation initiation factor IF-3 [Neisseria meningitidis
alpha704]
gi|427828433|ref|ZP_18995449.1| translation initiation factor IF-3 [Neisseria meningitidis H44/76]
gi|433464703|ref|ZP_20422188.1| translation initiation factor IF-3 [Neisseria meningitidis NM422]
gi|433466871|ref|ZP_20424328.1| translation initiation factor IF-3 [Neisseria meningitidis 87255]
gi|433468878|ref|ZP_20426307.1| translation initiation factor IF-3 [Neisseria meningitidis 98080]
gi|433471219|ref|ZP_20428610.1| translation initiation factor IF-3 [Neisseria meningitidis 68094]
gi|433473125|ref|ZP_20430489.1| translation initiation factor IF-3 [Neisseria meningitidis 97021]
gi|433475331|ref|ZP_20432672.1| translation initiation factor IF-3 [Neisseria meningitidis 88050]
gi|433477209|ref|ZP_20434532.1| translation initiation factor IF-3 [Neisseria meningitidis 70012]
gi|433479589|ref|ZP_20436883.1| translation initiation factor IF-3 [Neisseria meningitidis 63041]
gi|433481674|ref|ZP_20438939.1| translation initiation factor IF-3 [Neisseria meningitidis 2006087]
gi|433483660|ref|ZP_20440888.1| translation initiation factor IF-3 [Neisseria meningitidis 2002038]
gi|433485859|ref|ZP_20443060.1| translation initiation factor IF-3 [Neisseria meningitidis 97014]
gi|433487954|ref|ZP_20445122.1| translation initiation factor IF-3 [Neisseria meningitidis M13255]
gi|433490071|ref|ZP_20447201.1| translation initiation factor IF-3 [Neisseria meningitidis NM418]
gi|433492223|ref|ZP_20449317.1| translation initiation factor IF-3 [Neisseria meningitidis NM586]
gi|433494300|ref|ZP_20451370.1| translation initiation factor IF-3 [Neisseria meningitidis NM762]
gi|433496484|ref|ZP_20453525.1| translation initiation factor IF-3 [Neisseria meningitidis M7089]
gi|433498544|ref|ZP_20455553.1| translation initiation factor IF-3 [Neisseria meningitidis M7124]
gi|433500512|ref|ZP_20457498.1| translation initiation factor IF-3 [Neisseria meningitidis NM174]
gi|433502887|ref|ZP_20459852.1| translation initiation factor IF-3 [Neisseria meningitidis NM126]
gi|433504624|ref|ZP_20461564.1| translation initiation factor IF-3 [Neisseria meningitidis 9506]
gi|433506741|ref|ZP_20463654.1| translation initiation factor IF-3 [Neisseria meningitidis 9757]
gi|433509032|ref|ZP_20465905.1| translation initiation factor IF-3 [Neisseria meningitidis 12888]
gi|433510987|ref|ZP_20467819.1| translation initiation factor IF-3 [Neisseria meningitidis 4119]
gi|433513080|ref|ZP_20469874.1| translation initiation factor IF-3 [Neisseria meningitidis 63049]
gi|433515433|ref|ZP_20472205.1| translation initiation factor IF-3 [Neisseria meningitidis 2004090]
gi|433517227|ref|ZP_20473976.1| translation initiation factor IF-3 [Neisseria meningitidis 96023]
gi|433519447|ref|ZP_20476168.1| translation initiation factor IF-3 [Neisseria meningitidis 65014]
gi|433521548|ref|ZP_20478243.1| translation initiation factor IF-3 [Neisseria meningitidis 61103]
gi|433523683|ref|ZP_20480348.1| translation initiation factor IF-3 [Neisseria meningitidis 97020]
gi|433525591|ref|ZP_20482225.1| translation initiation factor IF-3 [Neisseria meningitidis 69096]
gi|433527836|ref|ZP_20484447.1| translation initiation factor IF-3 [Neisseria meningitidis NM3652]
gi|433530010|ref|ZP_20486603.1| translation initiation factor IF-3 [Neisseria meningitidis NM3642]
gi|433532268|ref|ZP_20488834.1| translation initiation factor IF-3 [Neisseria meningitidis 2007056]
gi|433534014|ref|ZP_20490559.1| translation initiation factor IF-3 [Neisseria meningitidis 2001212]
gi|433536406|ref|ZP_20492914.1| translation initiation factor IF-3 [Neisseria meningitidis 77221]
gi|433538601|ref|ZP_20495081.1| translation initiation factor IF-3 [Neisseria meningitidis 70030]
gi|433540580|ref|ZP_20497035.1| translation initiation factor IF-3 [Neisseria meningitidis 63006]
gi|193933311|gb|ACF29135.1| translation initiation factor 3 [Neisseria gonorrhoeae NCCP11945]
gi|254668144|emb|CBA04771.1| translation initiation factor IF-3 [Neisseria meningitidis alpha14]
gi|254674304|emb|CBA10088.1| translation initiation factor IF-3 [Neisseria meningitidis
alpha275]
gi|269209845|gb|EEZ76300.1| translation initiation factor IF-3 [Neisseria lactamica ATCC 23970]
gi|304337976|gb|EFM04114.1| translation initiation factor IF3 [Neisseria meningitidis ATCC
13091]
gi|308388910|gb|ADO31230.1| putative translation initiation factor IF-3 [Neisseria meningitidis
alpha710]
gi|316983702|gb|EFV62683.1| translation initiation factor IF-3 [Neisseria meningitidis H44/76]
gi|317163763|gb|ADV07304.1| translation initiation factor 3 [Neisseria gonorrhoeae
TCDC-NG08107]
gi|319410090|emb|CBY90426.1| translation initiation factor IF-3 [Neisseria meningitidis WUE
2594]
gi|325127773|gb|EGC50681.1| translation initiation factor IF-3 [Neisseria meningitidis N1568]
gi|325133765|gb|EGC56421.1| translation initiation factor IF-3 [Neisseria meningitidis M13399]
gi|325137876|gb|EGC60451.1| translation initiation factor IF-3 [Neisseria meningitidis ES14902]
gi|325197940|gb|ADY93396.1| translation initiation factor IF-3 [Neisseria meningitidis G2136]
gi|325200595|gb|ADY96050.1| translation initiation factor IF-3 [Neisseria meningitidis H44/76]
gi|325202483|gb|ADY97937.1| translation initiation factor IF-3 [Neisseria meningitidis
M01-240149]
gi|325203808|gb|ADY99261.1| translation initiation factor IF-3 [Neisseria meningitidis
M01-240355]
gi|389606202|emb|CCA45115.1| translation initiation factor IF-3 [Neisseria meningitidis
alpha522]
gi|393292267|emb|CCI72352.1| Translation initiation factor IF-3 [Neisseria meningitidis
alpha704]
gi|402318065|gb|EJU53590.1| translation initiation factor IF-3 [Neisseria meningitidis NM255]
gi|402318340|gb|EJU53863.1| translation initiation factor IF-3 [Neisseria meningitidis 93003]
gi|402320184|gb|EJU55675.1| translation initiation factor IF-3 [Neisseria meningitidis 93004]
gi|402323940|gb|EJU59378.1| translation initiation factor IF-3 [Neisseria meningitidis NM183]
gi|402324207|gb|EJU59643.1| translation initiation factor IF-3 [Neisseria meningitidis NM140]
gi|402326135|gb|EJU61540.1| translation initiation factor IF-3 [Neisseria meningitidis NM2781]
gi|402330489|gb|EJU65836.1| translation initiation factor IF-3 [Neisseria meningitidis 69166]
gi|402331131|gb|EJU66472.1| translation initiation factor IF-3 [Neisseria meningitidis NM576]
gi|402332444|gb|EJU67769.1| translation initiation factor IF-3 [Neisseria meningitidis 98008]
gi|402335632|gb|EJU70896.1| translation initiation factor IF-3 [Neisseria meningitidis 80179]
gi|402337297|gb|EJU72545.1| translation initiation factor IF-3 [Neisseria meningitidis 92045]
gi|402339378|gb|EJU74594.1| translation initiation factor IF-3 [Neisseria meningitidis NM2657]
gi|402341653|gb|EJU76826.1| translation initiation factor IF-3 [Neisseria meningitidis NM2795]
gi|402344178|gb|EJU79319.1| translation initiation factor IF-3 [Neisseria meningitidis NM3001]
gi|402345370|gb|EJU80487.1| translation initiation factor IF-3 [Neisseria meningitidis NM3081]
gi|432203447|gb|ELK59498.1| translation initiation factor IF-3 [Neisseria meningitidis 87255]
gi|432204190|gb|ELK60235.1| translation initiation factor IF-3 [Neisseria meningitidis NM422]
gi|432205271|gb|ELK61301.1| translation initiation factor IF-3 [Neisseria meningitidis 98080]
gi|432209708|gb|ELK65675.1| translation initiation factor IF-3 [Neisseria meningitidis 68094]
gi|432210726|gb|ELK66682.1| translation initiation factor IF-3 [Neisseria meningitidis 97021]
gi|432211149|gb|ELK67104.1| translation initiation factor IF-3 [Neisseria meningitidis 88050]
gi|432216431|gb|ELK72312.1| translation initiation factor IF-3 [Neisseria meningitidis 70012]
gi|432217392|gb|ELK73261.1| translation initiation factor IF-3 [Neisseria meningitidis 63041]
gi|432217505|gb|ELK73373.1| translation initiation factor IF-3 [Neisseria meningitidis 2006087]
gi|432221363|gb|ELK77173.1| translation initiation factor IF-3 [Neisseria meningitidis 2002038]
gi|432222905|gb|ELK78687.1| translation initiation factor IF-3 [Neisseria meningitidis 97014]
gi|432224420|gb|ELK80185.1| translation initiation factor IF-3 [Neisseria meningitidis M13255]
gi|432228646|gb|ELK84344.1| translation initiation factor IF-3 [Neisseria meningitidis NM418]
gi|432229012|gb|ELK84705.1| translation initiation factor IF-3 [Neisseria meningitidis NM586]
gi|432230974|gb|ELK86644.1| translation initiation factor IF-3 [Neisseria meningitidis NM762]
gi|432234378|gb|ELK89998.1| translation initiation factor IF-3 [Neisseria meningitidis M7124]
gi|432235184|gb|ELK90800.1| translation initiation factor IF-3 [Neisseria meningitidis M7089]
gi|432235803|gb|ELK91412.1| translation initiation factor IF-3 [Neisseria meningitidis NM174]
gi|432240983|gb|ELK96514.1| translation initiation factor IF-3 [Neisseria meningitidis NM126]
gi|432242139|gb|ELK97663.1| translation initiation factor IF-3 [Neisseria meningitidis 9506]
gi|432242806|gb|ELK98322.1| translation initiation factor IF-3 [Neisseria meningitidis 9757]
gi|432247846|gb|ELL03281.1| translation initiation factor IF-3 [Neisseria meningitidis 12888]
gi|432248478|gb|ELL03903.1| translation initiation factor IF-3 [Neisseria meningitidis 4119]
gi|432248757|gb|ELL04181.1| translation initiation factor IF-3 [Neisseria meningitidis 63049]
gi|432254021|gb|ELL09357.1| translation initiation factor IF-3 [Neisseria meningitidis 2004090]
gi|432254236|gb|ELL09571.1| translation initiation factor IF-3 [Neisseria meningitidis 96023]
gi|432255438|gb|ELL10767.1| translation initiation factor IF-3 [Neisseria meningitidis 65014]
gi|432260321|gb|ELL15580.1| translation initiation factor IF-3 [Neisseria meningitidis 61103]
gi|432260582|gb|ELL15840.1| translation initiation factor IF-3 [Neisseria meningitidis 97020]
gi|432261782|gb|ELL17027.1| translation initiation factor IF-3 [Neisseria meningitidis 69096]
gi|432266143|gb|ELL21331.1| translation initiation factor IF-3 [Neisseria meningitidis NM3652]
gi|432267938|gb|ELL23110.1| translation initiation factor IF-3 [Neisseria meningitidis NM3642]
gi|432268213|gb|ELL23384.1| translation initiation factor IF-3 [Neisseria meningitidis 2007056]
gi|432272524|gb|ELL27631.1| translation initiation factor IF-3 [Neisseria meningitidis 2001212]
gi|432274356|gb|ELL29444.1| translation initiation factor IF-3 [Neisseria meningitidis 77221]
gi|432274609|gb|ELL29696.1| translation initiation factor IF-3 [Neisseria meningitidis 70030]
gi|432277595|gb|ELL32641.1| translation initiation factor IF-3 [Neisseria meningitidis 63006]
Length = 134
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+Y+Q KK+ + K ++ +KE+K D+ DY ++++ +FL DGDKVKV +
Sbjct: 27 GKYKYQQAKKR--DEAKKNQKQVQIKEIKFRPGTDEGDYQIKMRNINRFLADGDKVKVTL 84
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVPNK 116
+GRE + + +L+ R + D+ E+A E+ R + +++ P K
Sbjct: 85 RFRGREMAHQQLGAQLLERVKEDLAEVAQIESFPKMEGRQMVMMIAPKK 133
>gi|302533486|ref|ZP_07285828.1| translation initiation factor IF-3 [Streptomyces sp. C]
gi|302442381|gb|EFL14197.1| translation initiation factor IF-3 [Streptomyces sp. C]
Length = 234
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE K + + +K+ A+ + +KE+K+ ID HDY + +FLK GDKVK+ +
Sbjct: 71 GKFKYESAMKAR-EARKNQAHTV-IKEMKLRPKIDPHDYDTKKGHVVRFLKQGDKVKITI 128
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILVPNK 116
+GRE + L++R +DV EL E N RN+ ++L P+K
Sbjct: 129 MFRGREQSRPELGYRLLQRLASDVEELGFIESNPKQDGRNMIMVLGPHK 177
>gi|319637848|ref|ZP_07992614.1| translation initiation factor IF-3 [Neisseria mucosa C102]
gi|317401003|gb|EFV81658.1| translation initiation factor IF-3 [Neisseria mucosa C102]
Length = 155
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+Y+Q KK+ + K ++ +KE+K D+ DY ++++ +FL DGDKVKV +
Sbjct: 48 GKYKYQQAKKR--DEAKKNQKQVQIKEIKFRPGTDEGDYQIKMRNINRFLADGDKVKVTL 105
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVPNK 116
+GRE + + +L+ R + D+ E+A E+ R + +++ P K
Sbjct: 106 RFRGREMAHQQLGAQLLERVKEDLAEVAQIESFPKMEGRQMVMMIAPKK 154
>gi|319651797|ref|ZP_08005922.1| translation initiation factor IF-3 [Bacillus sp. 2_A_57_CT2]
gi|317396449|gb|EFV77162.1| translation initiation factor IF-3 [Bacillus sp. 2_A_57_CT2]
Length = 167
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+++EQQKK K +K + +KE+++ I++HD++ +L+ A KFL+ GDKVK +
Sbjct: 59 GKFKFEQQKKDKEARKNQKI--ISIKEVRLSPTIEEHDFNTKLRNAIKFLEKGDKVKASI 116
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I ++ RF E+A E+ D R++F++L P
Sbjct: 117 RFKGRAITHKEIGQRVLIRFAQACNEVAVVESHPKMDGRSMFMVLAP 163
>gi|255066458|ref|ZP_05318313.1| translation initiation factor IF-3 [Neisseria sicca ATCC 29256]
gi|288576251|ref|ZP_05978465.2| translation initiation factor IF-3 [Neisseria mucosa ATCC 25996]
gi|349610031|ref|ZP_08889393.1| translation initiation factor IF-3 [Neisseria sp. GT4A_CT1]
gi|419797994|ref|ZP_14323441.1| translation initiation factor IF-3 [Neisseria sicca VK64]
gi|255049338|gb|EET44802.1| translation initiation factor IF-3 [Neisseria sicca ATCC 29256]
gi|288565906|gb|EFC87466.1| translation initiation factor IF-3 [Neisseria mucosa ATCC 25996]
gi|348610801|gb|EGY60483.1| translation initiation factor IF-3 [Neisseria sp. GT4A_CT1]
gi|385696528|gb|EIG27006.1| translation initiation factor IF-3 [Neisseria sicca VK64]
Length = 134
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+Y+Q KK+ + K ++ +KE+K D+ DY ++++ +FL DGDKVKV +
Sbjct: 27 GKYKYQQAKKR--DEAKKNQKQVQIKEIKFRPGTDEGDYQIKMRNINRFLADGDKVKVTL 84
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVPNK 116
+GRE + + +L+ R + D+ E+A E+ R + +++ P K
Sbjct: 85 RFRGREMAHQQLGAQLLERVKEDLAEVAQIESFPKMEGRQMVMMIAPKK 133
>gi|422110395|ref|ZP_16380418.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|309378778|emb|CBX22604.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 134
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+Y+Q KK+ + K ++ +KE+K D+ DY ++++ +FL DGDKVKV +
Sbjct: 27 GKYKYQQAKKR--DEAKKNQKQVQIKEIKFRPGTDEGDYQIKMRNINRFLADGDKVKVTL 84
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVPNK 116
+GRE + + +L+ R + D+ E+A E+ R + +++ P K
Sbjct: 85 RFRGREMAHQQLGAQLLERVKEDLAEVAQIESFPRMEGRQMVMMIAPKK 133
>gi|340363114|ref|ZP_08685465.1| translation initiation factor IF3 [Neisseria macacae ATCC 33926]
gi|339886638|gb|EGQ76277.1| translation initiation factor IF3 [Neisseria macacae ATCC 33926]
Length = 134
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+Y+Q KK+ + K ++ +KE+K D+ DY ++++ +FL DGDKVKV +
Sbjct: 27 GKYKYQQAKKR--DEAKKNQKQVQIKEIKFRPGTDEGDYQIKMRNINRFLADGDKVKVTL 84
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVPNK 116
+GRE + + +L+ R + D+ E+A E+ R + +++ P K
Sbjct: 85 RFRGREMAHQQLGAQLLERVKEDLAEVAQIESFPKMEGRQMVMMIAPRK 133
>gi|159901151|ref|YP_001547398.1| translation initiation factor IF-3 [Herpetosiphon aurantiacus DSM
785]
gi|159894190|gb|ABX07270.1| translation initiation factor IF-3 [Herpetosiphon aurantiacus DSM
785]
Length = 219
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 68/133 (51%), Gaps = 7/133 (5%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYRYEQ KK++ +K +++LKE++M D HD V++ AR+FL++G KVK V
Sbjct: 75 GKYRYEQTKKEREARKNQ--KQVELKEIRMQPRTDTHDLQVKVNNARRFLEEGHKVKFSV 132
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKALLQKAQEPPK 127
+GRE I E++ + D+ + E+ R +I+ P+ + Q P K
Sbjct: 133 RFRGREITHPEIGREMLEQIAEDLRDHGVLEQKPTLEGRAYSLIMAPSPSKTQ----PAK 188
Query: 128 KKDKQVVDEVSTG 140
+ DK S G
Sbjct: 189 RSDKPAPPLSSLG 201
>gi|345010530|ref|YP_004812884.1| translation initiation factor IF-3 [Streptomyces violaceusniger Tu
4113]
gi|344036879|gb|AEM82604.1| Translation initiation factor IF-3 [Streptomyces violaceusniger Tu
4113]
Length = 205
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++YE K + +K A +KE+K+ ID HDY + +FLK GDKVK+ +
Sbjct: 63 GKFKYESAMKAREARKNQAHTV--IKEMKLRPKIDPHDYDTKKGHVVRFLKQGDKVKITI 120
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVPNK 116
+GRE + L++R DV EL E+ +D RN+ ++L P+K
Sbjct: 121 MFRGREQSRPELGYRLLQRLAEDVQELGFVESSPKQDGRNMIMVLGPHK 169
>gi|110680169|ref|YP_683176.1| translation initiation factor IF-3 [Roseobacter denitrificans OCh
114]
gi|109456285|gb|ABG32490.1| translation initiation factor IF-3 [Roseobacter denitrificans OCh
114]
Length = 164
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
Query: 8 LSKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVI 67
K++YEQQK++ +KK +++KE+K N D +DY V+++ +FL++GDKVK+
Sbjct: 56 FGKFKYEQQKRESEARKKQKI--IEIKEVKFRPNTDTNDYDVKMRNVFRFLENGDKVKIT 113
Query: 68 VNLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVP 114
+ +GRE +N+ EL+ R D E EN R + +++ P
Sbjct: 114 LRFRGREMAHQNLGRELLERVAEDTKEAGRVENFPKMEGRQMVMLIGP 161
>gi|389819847|ref|ZP_10209515.1| translation initiation factor IF-3 [Planococcus antarcticus DSM
14505]
gi|388463107|gb|EIM05479.1| translation initiation factor IF-3 [Planococcus antarcticus DSM
14505]
Length = 157
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+++EQQKK + +K + +KE+++ +ID HD++ +L+ A KFL+ GDKVK +
Sbjct: 48 GKFKFEQQKKDREIRKNQKV--IVVKEVRLSPSIDDHDFNTKLRNAIKFLEKGDKVKASI 105
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I ++ RF E+A+ E + D R++F++L P
Sbjct: 106 RFKGRAITHKEIGQRVLERFAEACKEVATVEQRPKMDGRSMFLMLAP 152
>gi|308049558|ref|YP_003913124.1| translation initiation factor 3 (bIF-3) [Ferrimonas balearica DSM
9799]
gi|307631748|gb|ADN76050.1| bacterial translation initiation factor 3 (bIF-3) [Ferrimonas
balearica DSM 9799]
Length = 172
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+ YE+ K Q+KK+ ++ +KELK D DY V+L+ +FL++GDKVKV +
Sbjct: 64 GKFLYEKSKAANEQRKKT--KQIQVKELKFRPGTDVGDYQVKLRNLVRFLEEGDKVKVTL 121
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVPNK 116
+GRE + + +L+ R ++D ELA E+ R ++L P K
Sbjct: 122 RFRGREMAHQQLGFDLLNRIKDDTAELAQVESFPKMEGRQAIMVLAPKK 170
>gi|229916378|ref|YP_002885024.1| translation initiation factor IF-3 [Exiguobacterium sp. AT1b]
gi|229467807|gb|ACQ69579.1| translation initiation factor IF-3 [Exiguobacterium sp. AT1b]
Length = 176
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KYR+E QKK+K +K +M KE+++ I+ +D+ +L+ ARKFL+ G+KVK +
Sbjct: 68 GKYRFELQKKEKEARKNQKVIQM--KEVRLSPTIEDNDFQTKLRNARKFLEKGNKVKASI 125
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVPNK 116
+GR I ++ + + +LA+ E K R++F++L PNK
Sbjct: 126 RFRGRAITHSEIGKRVLDKMAAECADLATVEQKPKMEGRSMFLVLAPNK 174
>gi|59800744|ref|YP_207456.1| translation initiation factor IF-3 [Neisseria gonorrhoeae FA 1090]
gi|121634518|ref|YP_974763.1| translation initiation factor IF-3 [Neisseria meningitidis FAM18]
gi|218767843|ref|YP_002342355.1| translation initiation factor IF-3 [Neisseria meningitidis Z2491]
gi|54037381|sp|P65138.1|IF3_NEIMB RecName: Full=Translation initiation factor IF-3
gi|54041111|sp|P65137.1|IF3_NEIMA RecName: Full=Translation initiation factor IF-3
gi|75507420|sp|Q5F9U3.1|IF3_NEIG1 RecName: Full=Translation initiation factor IF-3
gi|166198958|sp|A1KSY3.1|IF3_NEIMF RecName: Full=Translation initiation factor IF-3
gi|59717639|gb|AAW89044.1| putative translation initiation factor IF-3 [Neisseria gonorrhoeae
FA 1090]
gi|120866224|emb|CAM09964.1| putative translation initiation factor IF-3 [Neisseria meningitidis
FAM18]
gi|121051851|emb|CAM08157.1| putative translation initiation factor IF-3 [Neisseria meningitidis
Z2491]
Length = 173
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY+Y+Q KK+ + K ++ +KE+K D+ DY ++++ +FL DGDKVKV +
Sbjct: 66 GKYKYQQAKKR--DEAKKNQKQVQIKEIKFRPGTDEGDYQIKMRNINRFLADGDKVKVTL 123
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVPNK 116
+GRE + + +L+ R + D+ E+A E+ R + +++ P K
Sbjct: 124 RFRGREMAHQQLGAQLLERVKEDLAEVAQIESFPKMEGRQMVMMIAPKK 172
>gi|323490462|ref|ZP_08095669.1| translation initiation factor IF-3 [Planococcus donghaensis MPA1U2]
gi|323395866|gb|EGA88705.1| translation initiation factor IF-3 [Planococcus donghaensis MPA1U2]
gi|456014357|gb|EMF47972.1| Translation initiation factor 3 [Planococcus halocryophilus Or1]
Length = 157
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+++EQQKK + +K + +KE+++ +ID HD++ +L+ A KFL+ GDKVK +
Sbjct: 48 GKFKFEQQKKDREIRKNQKV--IVVKEVRLSPSIDDHDFNTKLRNAIKFLEKGDKVKASI 105
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
KGR + I ++ RF E+A+ E + D R++F++L P
Sbjct: 106 RFKGRAITHKEIGQRVLERFAEACKEVATVEQRPKMDGRSMFLMLAP 152
>gi|303257522|ref|ZP_07343534.1| translation initiation factor IF-3 [Burkholderiales bacterium
1_1_47]
gi|331000213|ref|ZP_08323897.1| translation initiation factor IF-3 [Parasutterella
excrementihominis YIT 11859]
gi|302859492|gb|EFL82571.1| translation initiation factor IF-3 [Burkholderiales bacterium
1_1_47]
gi|329572379|gb|EGG54032.1| translation initiation factor IF-3 [Parasutterella
excrementihominis YIT 11859]
Length = 177
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+RY++QKK Q++K+ + +KE+K D++DY +L+A +FL DG+K KV +
Sbjct: 69 GKFRYQEQKK--AQEQKAKQKVIQVKEVKFRPQTDKNDYDTKLRALTRFLADGNKAKVTL 126
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEEN-KNFRDRNIFIILVPNK 116
+GRE + +L+ + + D+ ++A E+ R + ++L P K
Sbjct: 127 RYRGREMAHQEFGTDLLNKVKEDLADIAQVESFPKLEGRQMIMVLAPKK 175
>gi|118580722|ref|YP_901972.1| translation initiation factor IF-3 [Pelobacter propionicus DSM
2379]
gi|118503432|gb|ABK99914.1| bacterial translation initiation factor 3 (bIF-3) [Pelobacter
propionicus DSM 2379]
Length = 154
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 67/107 (62%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++Y+Q KK++ +KK A +++KE+K+ D HD ++K R+FL++G+K KV +
Sbjct: 46 GKFKYQQSKKQQESRKKQA--HVEVKEIKLRPKTDDHDLMFKVKHVRRFLEEGNKAKVTL 103
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENKNFRD-RNIFIILVP 114
+GRE +I +I+RF ++ ++A E + D RN+++I+ P
Sbjct: 104 VFRGREITHMDIGRAVIQRFAAELEDIAIIETQPRVDGRNMYMIVAP 150
>gi|433448398|ref|ZP_20411330.1| translation initiation factor IF-3 [Weissella ceti NC36]
gi|429539869|gb|ELA07903.1| translation initiation factor IF-3 [Weissella ceti NC36]
Length = 143
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 67/110 (60%), Gaps = 3/110 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++++ QKK++ Q+K + +KE+++ ID +D++ + KAA KFL+ G+KVKV +
Sbjct: 35 GKFKFDSQKKQREQRKNQKV--VSVKEIRLSPTIDDNDFNTKKKAAIKFLEKGNKVKVSI 92
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKA 117
+GR + I E++ + N++ E+A E R++F++L P +A
Sbjct: 93 RFRGRAITHKEIGREVMDKLANELAEVAKVEARAKMEGRSMFMVLAPKEA 142
>gi|292493206|ref|YP_003528645.1| translation initiation factor IF-3 [Nitrosococcus halophilus Nc4]
gi|291581801|gb|ADE16258.1| translation initiation factor IF-3 [Nitrosococcus halophilus Nc4]
Length = 165
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
KY +E+ KK++ +KK ++ +KE+K ++ DY V+L+ +FLK+GDK KV +
Sbjct: 59 GKYLFEESKKRQAARKKQ--KQIQIKEVKFRPGTEEGDYQVKLRNLVRFLKEGDKAKVSL 116
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNK 116
+GRE + + ++L+ R ++D+ E + E+N R + ++L P K
Sbjct: 117 RFRGRELAHQELGLKLLERVRDDLAEYGTVEQNPKREGRQMVMVLAPKK 165
>gi|451812811|ref|YP_007449264.1| translation initiation factor IF-3 [Candidatus
Kinetoplastibacterium blastocrithidii TCC012E]
gi|451778780|gb|AGF49660.1| translation initiation factor IF-3 [Candidatus
Kinetoplastibacterium blastocrithidii TCC012E]
Length = 178
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 66/112 (58%), Gaps = 3/112 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K++Y++QK++ + K+ + +KE+K + D+ DY+V+LK R+FL DGDK KV +
Sbjct: 65 GKFKYKEQKRQ--AEAKAKQKVIQVKEVKFRPSTDEGDYNVKLKNLRRFLDDGDKAKVTL 122
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELA-SEENKNFRDRNIFIILVPNKALL 119
+GRE + + + ++ R + D+ + A E R + ++L PNK ++
Sbjct: 123 RFRGREMAHQELGMRVLERIRKDLSDSAIVESMPRLEGRQMVMMLAPNKKMM 174
>gi|299535483|ref|ZP_07048805.1| translation initiation factor IF-3 [Lysinibacillus fusiformis ZC1]
gi|424737520|ref|ZP_18165971.1| translation initiation factor IF-3 [Lysinibacillus fusiformis ZB2]
gi|298729244|gb|EFI69797.1| translation initiation factor IF-3 [Lysinibacillus fusiformis ZC1]
gi|422948375|gb|EKU42754.1| translation initiation factor IF-3 [Lysinibacillus fusiformis ZB2]
Length = 167
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
K+++EQQKK + +K + +KE+++ ID+HD+ +L+ A KFL+ GDKVK +
Sbjct: 59 GKFKFEQQKKDREIRKNQKV--IVMKEVRLSPTIDEHDFQTKLRNAIKFLEKGDKVKCSL 116
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELASEENK-NFRDRNIFIILVP 114
KGR + I ++ RF E+++ E K R++F++L P
Sbjct: 117 RFKGRAITHKEIGQRVLDRFAEACAEVSTVEQKPKMEGRSMFLVLQP 163
>gi|282877700|ref|ZP_06286515.1| translation initiation factor IF-3 [Prevotella buccalis ATCC 35310]
gi|281300272|gb|EFA92626.1| translation initiation factor IF-3 [Prevotella buccalis ATCC 35310]
Length = 232
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 66/114 (57%), Gaps = 3/114 (2%)
Query: 9 SKYRYEQQKKKKGQQKKSAANRMDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIV 68
SK+ Y+Q+K+ K ++K ++++KE++ G D+HDY +LK A+ FL +G+KV+ V
Sbjct: 66 SKFLYQQKKRAKEMKQKQV--KVEVKEIRFGPQTDEHDYQFKLKHAQGFLNEGNKVRAYV 123
Query: 69 NLKGRENEFRNIAIELIRRFQNDVGELAS-EENKNFRDRNIFIILVPNKALLQK 121
+GR F+ L+ RF ND+ E E+ + +F+ L P K ++K
Sbjct: 124 FFRGRSILFKEQGEVLLLRFANDLEEYGKVEQMPKLEGKKMFLYLAPKKVGVEK 177
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.136 0.371
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,015,589,900
Number of Sequences: 23463169
Number of extensions: 75344566
Number of successful extensions: 285779
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3256
Number of HSP's successfully gapped in prelim test: 113
Number of HSP's that attempted gapping in prelim test: 280592
Number of HSP's gapped (non-prelim): 3470
length of query: 141
length of database: 8,064,228,071
effective HSP length: 105
effective length of query: 36
effective length of database: 9,895,562,622
effective search space: 356240254392
effective search space used: 356240254392
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 71 (32.0 bits)