Query 044578
Match_columns 769
No_of_seqs 426 out of 3076
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 07:43:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044578.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044578hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i6s_A Subtilisin-like proteas 100.0 6E-123 2E-127 1075.7 50.6 635 113-766 1-645 (649)
2 3vta_A Cucumisin; subtilisin-l 100.0 4E-111 2E-115 980.0 49.6 612 113-765 1-619 (621)
3 1xf1_A C5A peptidase, SCP; hyd 100.0 1.6E-81 5.4E-86 760.0 44.1 536 128-766 7-606 (926)
4 3afg_A Subtilisin-like serine 100.0 4.3E-61 1.5E-65 549.0 39.6 368 31-621 34-419 (539)
5 2z2z_A TK-subtilisin precursor 100.0 1.1E-59 3.8E-64 520.7 20.2 344 32-620 2-392 (395)
6 2p4e_P Proprotein convertase s 100.0 1.1E-59 3.7E-64 539.2 6.4 336 33-587 76-423 (692)
7 3t41_A Epidermin leader peptid 100.0 3.2E-57 1.1E-61 513.9 25.9 358 31-621 43-466 (471)
8 1r6v_A Subtilisin-like serine 100.0 1.1E-55 3.7E-60 509.7 25.3 377 28-631 27-450 (671)
9 1y9z_A Alkaline serine proteas 100.0 4E-55 1.4E-59 491.2 26.5 387 118-641 4-437 (441)
10 1dbi_A AK.1 serine protease; h 100.0 2E-52 7E-57 440.8 23.6 268 118-619 11-279 (280)
11 1gci_A Subtilisin; hydrolase, 100.0 2.7E-52 9.1E-57 437.0 20.7 265 118-619 4-269 (269)
12 1r0r_E Subtilisin carlsberg; h 100.0 2.1E-52 7.2E-57 439.5 19.6 266 118-619 4-274 (274)
13 1to2_E Subtilisin BPN'; serine 100.0 5.3E-52 1.8E-56 437.8 20.1 268 118-620 4-276 (281)
14 1thm_A Thermitase; hydrolase(s 100.0 1.2E-51 4E-56 435.0 22.2 267 118-619 11-278 (279)
15 2x8j_A Intracellular subtilisi 100.0 5.6E-52 1.9E-56 446.9 18.2 276 116-620 19-311 (327)
16 4h6x_A Thiazoline oxidase/subt 100.0 3.7E-53 1.3E-57 462.0 6.6 306 128-619 21-337 (357)
17 2ixt_A 36KDA protease; serine 100.0 1.6E-50 5.6E-55 433.8 24.4 291 117-614 5-309 (310)
18 2z30_A TK-subtilisin; thermoco 100.0 3.4E-51 1.2E-55 440.3 16.7 275 117-620 7-317 (320)
19 2iy9_A SUBA; toxin, shiga, pla 100.0 6.8E-51 2.3E-55 443.5 15.4 282 116-620 21-329 (347)
20 3zxy_A Subtilisin-like protein 100.0 1.1E-50 3.7E-55 429.1 16.0 264 134-619 3-274 (282)
21 3lxu_X Tripeptidyl-peptidase 2 100.0 6.4E-49 2.2E-53 470.8 29.6 353 214-765 267-652 (1354)
22 4h6w_A N-terminal cyanobactin 100.0 4.5E-50 1.5E-54 429.8 14.6 270 128-619 11-287 (306)
23 3lpc_A APRB2; protease, subtil 100.0 1.3E-49 4.6E-54 432.4 17.8 307 119-620 10-337 (340)
24 1sh7_A Extracellular subtilisi 100.0 2.7E-48 9.1E-53 409.6 23.5 245 118-587 4-257 (284)
25 1wmd_A Protease; alpha-beta hy 100.0 1.6E-48 5.4E-53 437.3 20.3 291 128-621 11-319 (434)
26 2pwa_A Proteinase K; structure 100.0 1.5E-48 5.3E-53 410.4 17.9 242 116-587 4-260 (279)
27 2b6n_A Proteinase K; S binding 100.0 9.1E-48 3.1E-52 405.1 20.3 247 118-587 6-261 (278)
28 4dzt_A Aqualysin-1, aqualysin- 100.0 1.1E-47 3.9E-52 404.5 20.2 248 116-588 4-260 (276)
29 2oxa_A Extracellular serine pr 100.0 1.5E-46 5.1E-51 437.2 24.6 299 127-625 59-430 (600)
30 1p8j_A Furin precursor; prohor 100.0 5.8E-47 2E-51 428.1 19.4 302 117-622 12-332 (471)
31 2qtw_B Proprotein convertase s 100.0 1.5E-46 5.1E-51 420.0 19.7 289 119-619 3-313 (546)
32 3f7m_A Alkaline serine proteas 100.0 1.8E-46 6.3E-51 395.9 16.5 239 119-587 8-261 (279)
33 2id4_A Kexin; KEX2, kexin, fur 100.0 8.2E-46 2.8E-50 421.5 19.0 293 118-622 27-344 (503)
34 3hjr_A Extracellular serine pr 100.0 1.4E-43 4.8E-48 413.8 26.6 319 127-623 59-428 (600)
35 1t1e_A Kumamolisin; proenzyme, 99.9 1.6E-25 5.4E-30 255.1 8.9 96 245-344 274-383 (552)
36 1ga6_A Serine-carboxyl protein 99.9 4.9E-22 1.7E-26 215.7 9.6 99 246-344 90-206 (372)
37 3edy_A Tripeptidyl-peptidase 1 99.0 3.3E-10 1.1E-14 128.1 8.6 76 269-344 284-374 (544)
38 2w2n_P Proprotein convertase s 99.0 3.1E-10 1.1E-14 101.3 6.2 80 29-111 34-113 (114)
39 3cnq_P Subtilisin BPN'; unclea 98.9 2.4E-09 8E-14 89.5 8.7 75 29-115 5-79 (80)
40 2qtw_A Proprotein convertase s 98.8 6.7E-09 2.3E-13 93.8 6.2 80 29-111 44-123 (124)
41 1v5i_B POIA1, IA-1=serine prot 98.7 3.6E-08 1.2E-12 81.2 7.1 70 33-111 3-75 (76)
42 3icu_A E3 ubiquitin-protein li 98.7 1.4E-07 4.9E-12 91.3 12.0 94 390-483 82-187 (194)
43 2z30_B TK-subtilisin; thermoco 97.7 4.2E-05 1.4E-09 60.5 4.9 63 33-111 2-64 (65)
44 2ek8_A Aminopeptidase; metallo 96.5 0.015 5.3E-07 63.9 12.3 69 402-470 111-182 (421)
45 2ys4_A Hydrocephalus-inducing 95.7 0.028 9.7E-07 50.2 8.1 73 682-761 41-114 (122)
46 3iib_A Peptidase M28; YP_92679 95.7 0.035 1.2E-06 61.4 10.3 102 375-483 105-227 (444)
47 3kas_A Transferrin receptor pr 95.3 0.029 1E-06 64.5 8.1 69 402-470 128-230 (640)
48 3fed_A Glutamate carboxypeptid 94.6 0.043 1.5E-06 63.9 7.2 71 401-471 150-268 (707)
49 3qbt_B Inositol polyphosphate 93.2 0.64 2.2E-05 42.4 10.9 84 682-766 43-138 (140)
50 2e6j_A Hydin protein; PAPD, st 89.8 0.46 1.6E-05 41.2 5.8 67 682-751 26-93 (112)
51 3lxu_X Tripeptidyl-peptidase 2 86.7 0.28 9.7E-06 60.2 3.0 24 134-157 32-55 (1354)
52 2r39_A FIXG-related protein; s 86.5 2.5 8.5E-05 37.1 8.4 55 682-738 31-85 (118)
53 3qis_A Inositol polyphosphate 85.6 4.8 0.00016 42.9 11.7 84 682-766 46-141 (366)
54 1y9z_A Alkaline serine proteas 85.2 0.56 1.9E-05 51.6 4.2 32 489-528 181-212 (441)
55 2qsv_A Uncharacterized protein 84.3 4.1 0.00014 40.0 9.7 78 682-763 19-103 (220)
56 2qsv_A Uncharacterized protein 70.3 26 0.00089 34.1 10.7 77 682-761 134-216 (220)
57 1row_A SSP-19, MSP-domain prot 68.2 17 0.00059 31.2 7.7 50 685-737 18-67 (109)
58 1z9l_A Vesicle-associated memb 67.7 11 0.00039 33.2 6.8 53 682-737 27-79 (128)
59 1m1s_A WR4; structural genomic 67.4 16 0.00054 31.8 7.4 51 685-738 26-76 (116)
60 1msp_A MSP, major sperm protei 65.6 14 0.00047 32.7 6.8 52 683-737 26-77 (126)
61 3idu_A Uncharacterized protein 64.5 26 0.00089 31.0 8.4 51 682-736 33-84 (127)
62 1wic_A Hypothetical protein ri 63.2 14 0.00047 33.9 6.6 52 683-737 36-87 (152)
63 2cri_A Vesicle-associated memb 58.3 15 0.00053 33.3 5.9 52 683-737 32-83 (147)
64 1w8o_A Bacterial sialidase; 3D 55.1 53 0.0018 37.0 11.2 87 667-761 363-451 (601)
65 3zyz_A Beta-D-glucoside glucoh 49.6 1.1E+02 0.0038 35.3 12.7 77 682-759 613-706 (713)
66 3sd2_A Putative member of DUF3 47.5 58 0.002 27.4 7.1 66 670-750 35-100 (101)
67 2kq1_A BH0266 protein; solutio 46.1 5.4 0.00018 34.9 0.7 54 684-737 55-110 (119)
68 3isy_A Bsupi, intracellular pr 41.7 1.1E+02 0.0038 26.6 8.4 54 682-736 18-88 (120)
69 3rfr_A PMOB; membrane, oxidore 41.3 87 0.003 32.9 8.8 65 682-752 298-395 (419)
70 3abz_A Beta-glucosidase I; gly 39.2 75 0.0026 37.6 9.1 45 542-586 618-663 (845)
71 2x41_A Beta-glucosidase; hydro 39.0 27 0.00092 40.6 5.3 56 682-738 615-678 (721)
72 1yew_A Particulate methane mon 37.8 63 0.0022 33.6 7.1 52 682-737 264-337 (382)
73 1wgl_A TOLL-interacting protei 37.4 26 0.00088 26.4 3.2 36 549-584 2-37 (59)
74 4ep8_B Urease subunit beta; al 33.1 56 0.0019 27.2 4.7 51 682-733 18-82 (101)
75 2l0d_A Cell surface protein; s 29.6 1.6E+02 0.0055 25.3 7.4 23 682-704 19-42 (114)
76 4ac7_B Urease subunit beta; hy 28.5 69 0.0024 27.9 4.7 17 682-698 24-40 (126)
77 4ubp_B Protein (urease (chain 28.5 69 0.0024 27.9 4.7 17 682-698 24-40 (126)
78 1ni7_A ER75, hypothetical prot 27.5 41 0.0014 30.8 3.4 34 544-578 77-110 (155)
79 3q48_A Chaperone CUPB2; IG fol 25.0 3.5E+02 0.012 26.7 10.1 52 683-737 43-104 (257)
80 3g0m_A Cysteine desulfuration 23.4 39 0.0013 30.4 2.4 33 544-577 70-102 (141)
81 3ndz_E Endoglucanase D; cellot 22.6 3.5E+02 0.012 22.8 9.1 31 683-713 16-47 (107)
82 3hrz_B Cobra venom factor; ser 20.9 2.2E+02 0.0076 28.0 7.7 66 665-737 85-155 (252)
No 1
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*
Probab=100.00 E-value=6.1e-123 Score=1075.73 Aligned_cols=635 Identities=42% Similarity=0.685 Sum_probs=573.4
Q ss_pred cCCCCcccCcCCCCCCCccccCCCCCCcEEEEeccccCCCCCCcccCCCCCCCCccccccccCCCcccccCCceeEeeEe
Q 044578 113 TTRSPLFLGLEPADSTSIWSQKVADYDVIVGVLDTGIWPESASFNDTGMTPVPAHWKGACETGRGFQKHHCNRKIVGARV 192 (769)
Q Consensus 113 ~~~s~~~~g~~~~~~~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~~~~~~~n~ki~g~~~ 192 (769)
++++|+|+|+... ..+|..+.+|+||+|||||||||++||+|.+.+++++|.+|+|.|+.|.+|....||+|++++++
T Consensus 1 Tt~s~~flgl~~~--~~~w~~~~~G~gViVaViDTGId~~Hp~f~d~g~~p~p~~wkg~c~~g~~f~~~~cN~kiig~~~ 78 (649)
T 3i6s_A 1 TTHTSDFLKLNPS--SGLWPASGLGQDVIVAVLDSGIWPESASFQDDGMPEIPKRWKGICKPGTQFNASMCNRKLIGANY 78 (649)
T ss_dssp CCSHHHHTTCCSS--SSHHHHHGGGTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCBTTBCTTSCCSSEEEEEE
T ss_pred CCCChHHcCCCCc--hhhHhccCCCCCCEEEEEccCCCCCChhhccCCCCCCccccccccccCccccccccccceeeeEe
Confidence 4788999999765 67999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccchhhccCcccccCCCCCCCCCCCChhhhhHhhccCCCCCCCccccccccceeeccCceEEEEEEeeCCCCCHHHHHH
Q 044578 193 FYRGYEAATGKINEQNEYKSPRDQDGHGTHTAATVAGSPVHGANLLGYAYGTARGMSTGARIAVYKVCWSGGCFSSDILS 272 (769)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~sdi~~ 272 (769)
|.++++... ++...+..+++|..||||||||||||+.+++.+.+|++.|++.||||+|+|++||+++..|+..+++++
T Consensus 79 f~~~~~~~~--~~~~~~~~~~~D~~GHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~~ 156 (649)
T 3i6s_A 79 FNKGILAND--PTVNITMNSARDTDGHGTHCASITAGNFAKGVSHFGYAPGTARGVAPRARLAVYKFSFNEGTFTSDLIA 156 (649)
T ss_dssp CCHHHHHHC--TTCCCTTCSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSSTTCEEEEEECEETTEECHHHHHH
T ss_pred ccCcccccc--cccccCCCCCCCCCCcHHHHHHHHhCCCCcCccccccccCceeEECCCCEEEEEeccCCCCCCHHHHHH
Confidence 998775433 233445667899999999999999999999888899999999999999999999999988899999999
Q ss_pred HHHHHHhCCCcEEEeccCCCCCCCccchHHHHHHHHHhcCcEEEEecCCCCCCCCcccCCCCceEEecCCCCCCceeeEE
Q 044578 273 AVDRAVADGVNVLSISLGGGVSSYHRDSLSIATFGAMEMGVFVSCSAGNGGPDPVSLTNVSPWITTVGASTLDRDFPATV 352 (769)
Q Consensus 273 ai~~a~~~g~dVIn~SlG~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgA~~~~~~~~~~~ 352 (769)
||+||+++|+||||||||+...++..+++..++++|.++|++||+||||+|+...++++.+||+|+|||++.||.|+.++
T Consensus 157 Ai~~A~~~gvdVIn~SlG~~~~~~~~~~i~~a~~~A~~~Gi~vV~AAGN~G~~~~t~~~~ap~vitVgAst~dr~f~~~~ 236 (649)
T 3i6s_A 157 AMDQAVADGVDMISISYGYRFIPLYEDAISIASFGAMMKGVLVSASAGNRGPGIGSLNNGSPWILCVASGHTDRTFAGTL 236 (649)
T ss_dssp HHHHHHHTTCSEEEECCCCCSCCGGGCHHHHHHHHHHHTTCEEEEECCSCTTSTTCCSCCCTTSEEEEEEECSCEEEEEE
T ss_pred HHHHHHHcCCCEEEeCCccCCcccchhHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCCCCceEEEeeeecccceeeEE
Confidence 99999999999999999988777888999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCcEEEEEEeccCCcCCCCCccccEEEecCCCCCCCCcccCCCCCCCCc--cceEEEEeCCCCchhhhhHHHhhcCc
Q 044578 353 KLGTGRTITGVSLYKGRRALLPNKQYPVVYMGSNSSNSSSLCLEGTLNPTTV--AGKIVICDRGISPRVQKGQVVKDAGG 430 (769)
Q Consensus 353 ~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~c~~~~~~~~~~--~g~ivl~~~g~~~~~~~~~~~~~~Ga 430 (769)
.+++++++.+.++|+... ....+|++|.. ....|.+..+++..+ +|||++|+||.|.+.+|..+++++|+
T Consensus 237 ~lgng~~~~g~sl~~~~~---~~~~~plv~~~-----~~~~C~~~~l~~~~vdl~GkIvlc~~g~~~~~~k~~~~~~~Ga 308 (649)
T 3i6s_A 237 TLGNGLKIRGWSLFPARA---FVRDSPVIYNK-----TLSDCSSEELLSQVENPENTIVICDDNGDFSDQMRIITRARLK 308 (649)
T ss_dssp EETTSCEEEEECCCSSCB---CEEEEEEECCT-----TTTTCCCHHHHTTSSSGGGCEEEECCCSCHHHHHHHHHHHTCS
T ss_pred EeCCCcEEeeeecccCcc---cCcceeeEecc-----cccccccccccccccccCCcEEEEeCCCccHHHHHHHHHhcCc
Confidence 999999999999998764 35779999976 456799888888877 99999999999999999999999999
Q ss_pred eEEEEecCCCCCccccccccccceEEEChhhhHHHHHHHhcCCCceEEEEecceeecccCCCeeccccCCCCCCCCCCcc
Q 044578 431 IGVILANTAANGEELVADCHLLPAVAVGEIEGKEIKQYASTSPKATASLALLGTRVGIKPSPVVAAFSSRGPNFLTLEIL 510 (769)
Q Consensus 431 ~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~l 510 (769)
.|+|++|+. .....+.+.+|+++++..+++.|++|++++.++++++.+..+..+..+.+.+++||||||+...+++|
T Consensus 309 ~g~i~~n~~---~~~~~~~~~~P~~~v~~~~g~~i~~yi~s~~~~~a~i~~~~t~~~~~~~~~va~FSSrGP~~~~~~il 385 (649)
T 3i6s_A 309 AAIFISEDP---GVFRSATFPNPGVVVNKKEGKQVINYVKNSVTPTATITFQETYLDTKPAPVVAASSARGPSRSYLGIS 385 (649)
T ss_dssp EEEEECCCG---GGGGCCCCCSCEEEECHHHHHHHHHHHHTCSSCEEEEEEEEEECCCSSCCEECTTSCCSSCTTCTTSC
T ss_pred eEEEEecCc---cccccccCcCCEEEEcHHHHHHHHHHHhcCCCceEEEeecceeeccCCCCcccccCCCCCCCCCCCcc
Confidence 999999986 44556788999999999999999999999999999999999999888999999999999999888999
Q ss_pred cCeeeeCCCceeecccCCCCCCCCCCCc-cccceeeeccccchhhhhHHHHHHHHhhCCCCCHHHHHHHHHhcccccCCC
Q 044578 511 KPDIVAPGVNILAAWSGETGPSSLPADH-RRVKFNILSGTSMSCPHVSGIAALLKARHPEWSPAAIKSALMTTAYVHDNT 589 (769)
Q Consensus 511 KPDI~APG~~I~sa~~~~~~~~~~~~~~-~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lsp~~ik~~L~~TA~~~~~~ 589 (769)
||||+|||++|+++++..........+. ....|..+||||||||||||++|||||+||+|+|++||++||+||+++++.
T Consensus 386 KPDI~APG~~Ilsa~~~~~~~~~~~~d~~~~~~y~~~SGTSMAaPhVAGvaALlks~~P~~Spa~IksaLmtTA~~~~~~ 465 (649)
T 3i6s_A 386 KPDILAPGVLILAAYPPNVFATSIGTNILLSTDYILESGTSMAAPHAAGIAAMLKAAHPEWSPSAIRSAMMTTADPLDNT 465 (649)
T ss_dssp SCCEEEECSSEEEECCTTSCCEEETTTEEECCSEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCBCTT
T ss_pred CCeEEeCCCCeEeecCCCCCccccccccccccceecccccccccHHHHHHHHHHHHhCCCCCHHHHHHHHhcccccccCC
Confidence 9999999999999998864433222222 335899999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCcccCccccCCCCceeccCccchhhhcccCCCCccceeeeecccccc--ccCCCCCCCCCC
Q 044578 590 HNPLKDASSYEPSSPYDHGAGHINPVKALDPGLIYDINAQDYFDFLCSQKLTPMELQVFRKYANRT--CRHSIAKPGDLN 667 (769)
Q Consensus 590 g~~~~~~~~~~~~~~~~~G~G~vd~~~Al~~~lv~d~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ln 667 (769)
+.++.+...+.+++++.||+|+||+.+|++||||||++.+||+.|||++||+.++|+.|++ ...+ |+. .+.+||
T Consensus 466 g~~i~~~~~~~~a~~~~~GaG~vn~~~A~~pGLvyd~~~~dy~~flc~~~y~~~~i~~~~~-~~~~~~C~~---~~~~lN 541 (649)
T 3i6s_A 466 RKPIKDSDNNKAATPLDMGAGHVDPNRALDPGLVYDATPQDYVNLLCSLNFTEEQFKTIAR-SSASHNCSN---PSADLN 541 (649)
T ss_dssp SSBCEETTTSSBCCHHHHTTCBCCHHHHTCCSEECCCCHHHHHHHHHTTCCCHHHHHHHHT-TTSCC-CCC---CCCCCC
T ss_pred CCcccccccCCcCCcCCCCeeeeCHHHhcCccccccCCchhHHHhhhcCCCCcccceeeec-CCCcCCCCC---chhhcC
Confidence 9999887667889999999999999999999999999999999999999999999999998 5666 974 578999
Q ss_pred cCceeeeccCCCccee--EEEEEEEEEeCCCCeeEEEEEeCCCCcEEEEecCeEEEeecCeeEEEEEEEEeeC-CCCCcE
Q 044578 668 YPAISVVFPETANVSA--LTLRRTVTNVGPPVSNYHVVVSPFKGVAIKVEPQKLHFTKKYQKLSYKITFTTKS-PETIPE 744 (769)
Q Consensus 668 ~ps~~~~~~~~~~~~~--~~~~~tv~n~~~~~~ty~~~v~~~~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~~-~~~~~~ 744 (769)
||||++.+........ +||+|||||||+...+|+++++.|.|++|+|+|.+|+|++.+|+++|+|||+... ....+.
T Consensus 542 yPs~~~~~~~~~~~~~~~~~~~Rtvtnvg~~~~~y~~~v~~p~g~~v~v~P~~l~f~~~~~~~~f~v~~~~~~~~~~~~~ 621 (649)
T 3i6s_A 542 YPSFIALYSIEGNFTLLEQKFKRTVTNVGKGAATYKAKLKAPKNSTISVSPQILVFKNKNEKQSYTLTIRYIGDEGQSRN 621 (649)
T ss_dssp CSSEEEEECCSSCCCCEEEEEEEEEEECC--CEEEEEEEECCTTEEEEEESSEEEECC-CCEEEEEEEEEECCC---CCC
T ss_pred CCcEEeecccCCCCccceEEEEEEEEEeCCCCcEEEEEEecCCCCEEEEECCEEEEecCCCEEEEEEEEEecccCCCceE
Confidence 9999998731110112 8999999999998999999999999999999999999988999999999999875 456799
Q ss_pred EEEEEEEc--CceeEEeEEEEEee
Q 044578 745 FGGLIWKD--GVHKVRSPIVITRL 766 (769)
Q Consensus 745 ~G~~~~~~--~~~~v~~P~~~~~~ 766 (769)
||+|+|+| +.|.||+||+|+..
T Consensus 622 fg~l~w~~~~~~h~vrsPi~v~~~ 645 (649)
T 3i6s_A 622 VGSITWVEQNGNHSVRSPIVTSPI 645 (649)
T ss_dssp EEEEEEEETTSCCEEEEEEEEEEC
T ss_pred EEEEEEEcCCCCeEEEEeEEEEEc
Confidence 99999998 99999999999876
No 2
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=100.00 E-value=4.4e-111 Score=980.01 Aligned_cols=612 Identities=41% Similarity=0.722 Sum_probs=513.6
Q ss_pred cCCCCcccCcCCCCCCCccccCCCCCCcEEEEeccccCCCCCCcccCCCCCCCCccccccccCCCcccccCCceeEeeEe
Q 044578 113 TTRSPLFLGLEPADSTSIWSQKVADYDVIVGVLDTGIWPESASFNDTGMTPVPAHWKGACETGRGFQKHHCNRKIVGARV 192 (769)
Q Consensus 113 ~~~s~~~~g~~~~~~~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~~~~~~~n~ki~g~~~ 192 (769)
++++|+|+|++. .+|....+|+||+|||||||||++||+|+++++++++.+|+|.|+.+.+|. ||+|++++++
T Consensus 1 tt~s~~flGl~~----~~~~~~~~G~gViVgViDTGId~~Hp~f~d~g~~~~~~~w~g~~~~~~~~~---~n~k~ig~~~ 73 (621)
T 3vta_A 1 TTRSWDFLGFPL----TVPRRSQVESNIVVGVLDTGIWPESPSFDDEGFSPPPPKWKGTCETSNNFR---CNRKIIGARS 73 (621)
T ss_dssp CCSHHHHTTCCT----TCCCCHHHHTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCSSSCC---CCSSEEEEEE
T ss_pred CCCChhHcCCCc----cccccCCCCCCCEEEEEecCCCCCChhhcCCCCCCcccccccccccCCCcc---cCcceeeeee
Confidence 578999999964 488889999999999999999999999999999999999999999998874 9999999999
Q ss_pred cccchhhccCcccccCCCCCCCCCCCChhhhhHhhccCCCCCCCccccccccceeeccCceEEEEEEeeCCCCCHHHHHH
Q 044578 193 FYRGYEAATGKINEQNEYKSPRDQDGHGTHTAATVAGSPVHGANLLGYAYGTARGMSTGARIAVYKVCWSGGCFSSDILS 272 (769)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~sdi~~ 272 (769)
|..+.... ..+..+++|++||||||||||||+.+++.+.+|.+.|.++||||+|+|++||+|++.||..+++++
T Consensus 74 ~~~~~~~~------~~~~~~p~D~~GHGTHvAgi~AG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~g~~~~di~~ 147 (621)
T 3vta_A 74 YHIGRPIS------PGDVNGPRDTNGHGTHTASTAAGGLVSQANLYGLGLGTARGGVPLARIAAYKVCWNDGCSDTDILA 147 (621)
T ss_dssp CCCSSSCC------TTCCSSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSCTTSEEEEEECEETTEECHHHHHH
T ss_pred cccCCccC------CCCCCCCCCCCcCHHHHHHHHhCcCCCCccccccccccEEEECCCCEEEEEEeecCCCCCHHHHHH
Confidence 98765332 234456899999999999999999988888888888899999999999999999999999999999
Q ss_pred HHHHHHhCCCcEEEeccCCCC-CCCccchHHHHHHHHHhcCcEEEEecCCCCCCCCcccCCCCceEEecCCCCCCceeeE
Q 044578 273 AVDRAVADGVNVLSISLGGGV-SSYHRDSLSIATFGAMEMGVFVSCSAGNGGPDPVSLTNVSPWITTVGASTLDRDFPAT 351 (769)
Q Consensus 273 ai~~a~~~g~dVIn~SlG~~~-~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgA~~~~~~~~~~ 351 (769)
||++|+++|+||||||||+.. ..+..++++.++++|+++|+++|+||||+|+...++++.+||+++|++++.++.|...
T Consensus 148 a~~~a~~~g~dVin~SlG~~~~~~~~~~~~~~~~~~a~~~Gi~vv~aAGN~g~~~~t~~~~a~~~~~v~ast~d~~~~~~ 227 (621)
T 3vta_A 148 AYDDAIADGVDIISLSVGGANPRHYFVDAIAIGSFHAVERGILTSNSAGNGGPNFFTTASLSPWLLSVAASTMDRKFVTQ 227 (621)
T ss_dssp HHHHHHHHTCSEEEECCCCCCGGGGGGCTHHHHHHHHHTTTCEEEEECCSCCSSTTCCCCCCTTSEEEEEECCSEEEEEE
T ss_pred HHHHHHHhCCCEEEecCCCCCCCCcCCcHHHHHHHHHHHCCCEEEEeCCCCCCCCcccCCCCCCceeEEEeeccccceee
Confidence 999999999999999999865 3456788999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCcEEEEEEeccCCcCCCCCccccEEEecCCCC-----CCCCcccCCCCCCCCccceEEEEeCCCCchhhhhHHHh
Q 044578 352 VKLGTGRTITGVSLYKGRRALLPNKQYPVVYMGSNSS-----NSSSLCLEGTLNPTTVAGKIVICDRGISPRVQKGQVVK 426 (769)
Q Consensus 352 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-----~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~~~~~~ 426 (769)
+.++++..+.+.+++... ...+++++...... .....|.+..+++.+++|||++|.++ +..+..+..
T Consensus 228 ~~~~~~~~~~~~s~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~gkivl~~~~---~~~~~~~~~ 299 (621)
T 3vta_A 228 VQIGNGQSFQGVSINTFD-----NQYYPLVSGRDIPNTGFDKSTSRFCTDKSVNPNLLKGKIVVCEAS---FGPHEFFKS 299 (621)
T ss_dssp EEETTSCEEEEBCCCCSC-----CEEECEEETTTSCCTTCCHHHHTTTCTTCSCGGGTTTSEEECSSC---CCHHHHHHH
T ss_pred EEeccCceeeeeecccCC-----CcccccccccccccccccccccccccccccccccccceEEEEecC---CChhHHhhh
Confidence 999999999988876543 35677777654422 23567888899999999999999865 445677788
Q ss_pred hcCceEEEEecCCCCCccccccccccceEEEChhhhHHHHHHHhcCCCceEEEEecceeecccCCCeeccccCCCCCCCC
Q 044578 427 DAGGIGVILANTAANGEELVADCHLLPAVAVGEIEGKEIKQYASTSPKATASLALLGTRVGIKPSPVVAAFSSRGPNFLT 506 (769)
Q Consensus 427 ~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fSS~GP~~~~ 506 (769)
..|+.+++++++... ..+.+.+|...++..++..++.|+.....+.+.+....+ ......+.++.||||||+...
T Consensus 300 ~~Ga~gvi~~~~~~~----~~~~~~lP~~~v~~~~g~~i~~~~~~~~~~~a~~~~~~~-~~~~~~~~va~FSSrGP~~~~ 374 (621)
T 3vta_A 300 LDGAAGVLMTSNTRD----YADSYPLPSSVLDPNDLLATLRYIYSIRSPGATIFKSTT-ILNASAPVVVSFSSRGPNRAT 374 (621)
T ss_dssp HTTCSEEEEECSCCS----SCCCCSSSEEEECHHHHHHHHHHHHHHSSCCEEECCCEE-EECTTCCCBCTTSCCCSCTTC
T ss_pred hcceeEEEEEecCCC----cccccccceEEECHHHHHHHHHHHhccCCcceEEecceE-eccCCCCceeeecCCCCCCCC
Confidence 899999999987543 345678999999999999999999999888877754443 344678899999999999877
Q ss_pred CCcccCeeeeCCCceeecccCCCCCCCCCCCccccceeeeccccchhhhhHHHHHHHHhhCCCCCHHHHHHHHHhccccc
Q 044578 507 LEILKPDIVAPGVNILAAWSGETGPSSLPADHRRVKFNILSGTSMSCPHVSGIAALLKARHPEWSPAAIKSALMTTAYVH 586 (769)
Q Consensus 507 ~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lsp~~ik~~L~~TA~~~ 586 (769)
++++||||+|||++|+|+++....... ......|..|||||||||||||++|||||+||+|+|++||++||+||+++
T Consensus 375 ~~ilKPDI~APG~~Ilsa~~~~~~~~~---~~~~~~y~~~SGTSMAaPhVAGvaALl~q~~P~~spa~IksaLmtTA~~~ 451 (621)
T 3vta_A 375 KDVIKPDISGPGVEILAAWPSVAPVGG---IRRNTLFNIISGTSMSCPHITGIATYVKTYNPTWSPAAIKSALMTTASPM 451 (621)
T ss_dssp TTSCSCCEEEECSSEEEECCSSSCBTT---BCCCCSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTCBCC
T ss_pred CCeeccccccCCcceEeecCccccccC---cCCCCcceEecCccccchhhhhHHHHHHHHCCCCCHHHHHHHHHhcCCcc
Confidence 899999999999999999986543221 22345799999999999999999999999999999999999999999988
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCcccCccccCCCCceeccCccchhhhcccCCCCccceeeeeccccccccCC-CCCCCC
Q 044578 587 DNTHNPLKDASSYEPSSPYDHGAGHINPVKALDPGLIYDINAQDYFDFLCSQKLTPMELQVFRKYANRTCRHS-IAKPGD 665 (769)
Q Consensus 587 ~~~g~~~~~~~~~~~~~~~~~G~G~vd~~~Al~~~lv~d~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 665 (769)
+.. ..++.++.||+|+||+.+|++||||||+..+||+.|||+++|+.++++.+++ ....|... .....+
T Consensus 452 ~~~---------~~~~~~~~~GaG~v~~~~A~~pGLvyd~~~~dy~~~lc~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 521 (621)
T 3vta_A 452 NAR---------FNPQAEFAYGSGHVNPLKAVRPGLVYDANESDYVKFLCGQGYNTQAVRRITG-DYSACTSGNTGRVWD 521 (621)
T ss_dssp CTT---------TCTTTHHHHTTCBCCHHHHSCCSEECCCCGGGCC------------------------------CGGG
T ss_pred ccc---------CCCCCchhcCCCccCHHHhcCCCeEeecccchhhhhhcccCCCchhheeeec-cccccCCCCcCcccc
Confidence 654 3456788999999999999999999999999999999999999999999998 66677664 456789
Q ss_pred CCcCceeeeccCCCcceeEEEEEEEEEeCCCCeeEEEEEeCCCCcEEEEecCeEEEeecCeeEEEEEEEEeeCCCCCcEE
Q 044578 666 LNYPAISVVFPETANVSALTLRRTVTNVGPPVSNYHVVVSPFKGVAIKVEPQKLHFTKKYQKLSYKITFTTKSPETIPEF 745 (769)
Q Consensus 666 ln~ps~~~~~~~~~~~~~~~~~~tv~n~~~~~~ty~~~v~~~~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~~~~~~~ 745 (769)
||||||++.+.... ..+++|+||||||++...||++++++|.|++|+|+|++|+|++.+|+++|+|||+.. ..+.++|
T Consensus 522 lN~pS~~v~~~~~~-~~~~t~~rtvtnvg~~~~ty~~~v~~p~gv~v~V~P~~l~f~~~~~~~~~~vt~~~~-~~~~~~~ 599 (621)
T 3vta_A 522 LNYPSFGLSVSPSQ-TFNQYFNRTLTSVAPQASTYRAMISAPQGLTISVNPNVLSFNGLGDRKSFTLTVRGS-IKGFVVS 599 (621)
T ss_dssp SCCSSEEEECCSSC-CEEEEEEEEEEECSSSCEEEEEEEECCSSEEEEEESSEEEECSTTCEEEEEEEEEEC-CCSSEEE
T ss_pred cccccEEEEccCCC-ceEEEEEEEEEccCCCCeEEEEEEECCCCcEEEEecCEEEEcCCCcEEEEEEEEEec-CCCceEE
Confidence 99999999765432 468999999999999999999999999999999999999999889999999999864 5688999
Q ss_pred EEEEEEcCceeEEeEEEEEe
Q 044578 746 GGLIWKDGVHKVRSPIVITR 765 (769)
Q Consensus 746 G~~~~~~~~~~v~~P~~~~~ 765 (769)
|+|+|+||.|.||+||+|+.
T Consensus 600 g~l~w~d~~h~Vr~Pi~v~~ 619 (621)
T 3vta_A 600 ASLVWSDGVHYVRSPITITS 619 (621)
T ss_dssp EEEEEECSSCCCEEEEEEEC
T ss_pred EEEEEEcCCEEEEeCEEEEE
Confidence 99999999999999999985
No 3
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=100.00 E-value=1.6e-81 Score=760.00 Aligned_cols=536 Identities=21% Similarity=0.276 Sum_probs=423.8
Q ss_pred CCccccCCCCCCcEEEEeccccCCCCCCcccCCCCCCCCccccccccCCCc----------ccccCCceeEeeEecccch
Q 044578 128 TSIWSQKVADYDVIVGVLDTGIWPESASFNDTGMTPVPAHWKGACETGRGF----------QKHHCNRKIVGARVFYRGY 197 (769)
Q Consensus 128 ~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~~----------~~~~~n~ki~g~~~~~~~~ 197 (769)
+.+|..+.+|+||+|||||||||++||+|.+. ..|++.|..+..| ...+||+|++++++|.++.
T Consensus 7 ~~~w~~~~~G~GV~VaVIDTGId~~Hp~f~~~------~~~~~~~~~~~~~~~~~~~~g~~~g~~~n~Kii~~~~~~~~~ 80 (926)
T 1xf1_A 7 KTLQEKAGKGAGTVVAVIDAGFDKNHEAWRLT------DKTKARYQSKEDLEKAKKEHGITYGEWVNDKVAYYHDYSKDG 80 (926)
T ss_dssp HHHHHHHCSCTTCEEEEEESCCTTCCCCCSCC------SCCCSSCCHHHHHHHHHHTTTCCCCBCCSSSCCEEEESCCCS
T ss_pred HHHHhccCCCCCcEEEEEecCCCCCCHhHcCC------CCCcccccchhhhcccccccCcccccccCcccceeeccccCC
Confidence 67999999999999999999999999999853 5676666533222 2247999999999987642
Q ss_pred hhccCcccccCCCCCCCCCCCChhhhhHhhccCCCCCCCccccccccceeeccCceEEEEEEeeCCC--CCHHHHHHHHH
Q 044578 198 EAATGKINEQNEYKSPRDQDGHGTHTAATVAGSPVHGANLLGYAYGTARGMSTGARIAVYKVCWSGG--CFSSDILSAVD 275 (769)
Q Consensus 198 ~~~~~~~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g--~~~sdi~~ai~ 275 (769)
...|+.||||||||||||+.....+. .+.+.||||+|+|++||+|++.+ +..+++++||+
T Consensus 81 --------------~~~D~~gHGThVAgiiAg~~~~~~~~----~~~~~GvAP~A~l~~~kv~~~~g~~~~~~~i~~Ai~ 142 (926)
T 1xf1_A 81 --------------KTAVDQEHGTHVSGILSGNAPSETKE----PYRLEGAMPEAQLLLMRVEIVNGLADYARNYAQAIR 142 (926)
T ss_dssp --------------CCCCSSTTTTHHHHSSCCCCCCCCSC----SCCTTTTCTTSEEEEEECCCCSCHHHHHHHHHHHHH
T ss_pred --------------CCCCCCCcHHHHHHHHhCCCccCccc----CCceEEECCCCEEEEEEeecCCCCCCcHHHHHHHHH
Confidence 12288999999999999997554322 23469999999999999998776 45678999999
Q ss_pred HHHhCCCcEEEeccCCCC--CCCccchHHHHHHHHHhcCcEEEEecCCCCCCC-------------C--cccCCCCceEE
Q 044578 276 RAVADGVNVLSISLGGGV--SSYHRDSLSIATFGAMEMGVFVSCSAGNGGPDP-------------V--SLTNVSPWITT 338 (769)
Q Consensus 276 ~a~~~g~dVIn~SlG~~~--~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~G~~~-------------~--~~~~~~p~vit 338 (769)
||+++|+||||||||+.. .....+.+..++++|.++|++||+||||+|+.. . ..++.+||+|+
T Consensus 143 ~Ai~~gvdVIn~SlG~~~~~~~~~~~~~~~ai~~A~~~GilvV~AAGN~G~~g~~~~~~~~~~p~~~tv~~PA~~~~vit 222 (926)
T 1xf1_A 143 DAINLGAKVINMSFGNAALAYANLPDETKKAFDYAKSKGVSIVTSAGNDSSFGGKTRLPLADHPDYGVVGTPAAADSTLT 222 (926)
T ss_dssp HHHHTTCEEEEECCSSCCCTTCCCCHHHHHHHHHHHHTTCEEEEECCSCCBTTCTTSCCBTTCCCCBCCCSCTTTCCSEE
T ss_pred HHHHhCCcEEEECCCCCCCCccccccHHHHHHHHHHhCCcEEEEeCCCCCCcCCccccccccCCCcceecCcccCCceEE
Confidence 999999999999999864 234566788888899999999999999999632 2 22345899999
Q ss_pred ecCCCCCCceeeEEEe-CCCcEEEEEEeccCCcCCCCCccccEEEecCCCCCCCCcccCCCCCCCCccceEEEEeCCCCc
Q 044578 339 VGASTLDRDFPATVKL-GTGRTITGVSLYKGRRALLPNKQYPVVYMGSNSSNSSSLCLEGTLNPTTVAGKIVICDRGISP 417 (769)
Q Consensus 339 VgA~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~ 417 (769)
|||++.++.+...+.+ +++....+.+++.... ......+|+++.+. .|.+..+ .+++|||++|+||.|.
T Consensus 223 VgA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~lv~~~~-------g~~~~~~--~~v~Gkivl~~rg~~~ 292 (926)
T 1xf1_A 223 VASYSPDKQLTETVRVKTADQQDKEMPVLSTNR-FEPNKAYDYAYANR-------GTKEDDF--KDVKGKIALIERGDID 292 (926)
T ss_dssp EEEEBCSEEEEEEEEEECTTSCEEEEEEEEESC-CCTTCCEEEEECTT-------SCSTTTT--TTCTTSEEEEECCSSC
T ss_pred EeccccccccccceEEEcCCCcceeeEEEecCC-CCCCceEEEEECCC-------CCCccch--hhcCCeEEEEECCCCC
Confidence 9999999999988888 6665555555543322 11356799999754 3766555 6899999999999999
Q ss_pred hhhhhHHHhhcCceEEEEecCCCCCcc-ccccccccceEEEChhhhHHHHHHHhcCCCceEEEEeccee--ecccCCCee
Q 044578 418 RVQKGQVVKDAGGIGVILANTAANGEE-LVADCHLLPAVAVGEIEGKEIKQYASTSPKATASLALLGTR--VGIKPSPVV 494 (769)
Q Consensus 418 ~~~~~~~~~~~Ga~g~i~~n~~~~~~~-~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 494 (769)
+.+|..+++++|+.|+|++|+...... .......+|+.+++..+++.|++ . +..++.+..+. ......+.+
T Consensus 293 ~~~k~~~~~~~Ga~gvi~~n~~~~~~~~~~~~~~~iP~~~i~~~~g~~l~~----~--~~~ti~~~~~~~~~~~~~~~~~ 366 (926)
T 1xf1_A 293 FKDKIAKAKKAGAVGVLIYDNQDKGFPIELPNVDQMPAAFISRKDGLLLKD----N--PQKTITFNATPKVLPTASGTKL 366 (926)
T ss_dssp HHHHHHHHHHTTCSEEEEECSSTTCCCEECCCSTTCCEEEECHHHHHHHHH----C--SSCEEEECSSCEEEECSSCSBC
T ss_pred HHHHHHHHHhCCCcEEEEEecCCCCcccccCccccccEEEEeHHHHHHHHh----C--CceEEEecccceecccCCccee
Confidence 999999999999999999998754332 23346789999999999998874 3 34455555443 455667899
Q ss_pred ccccCCCCCCCCCCcccCeeeeCCCceeecccCCCCCCCCCCCccccceeeeccccchhhhhHHHHHHHHh----hCCCC
Q 044578 495 AAFSSRGPNFLTLEILKPDIVAPGVNILAAWSGETGPSSLPADHRRVKFNILSGTSMSCPHVSGIAALLKA----RHPEW 570 (769)
Q Consensus 495 a~fSS~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q----~~p~l 570 (769)
+.||||||+. ++++||||+|||++|+++++.+ .|..+||||||||||||++|||+| .||+|
T Consensus 367 a~FSSrGp~~--~~~lKPDI~APG~~I~sa~~~~-------------~y~~~SGTSMAaPhVAG~aALl~q~~k~~~P~~ 431 (926)
T 1xf1_A 367 SRFSSWGLTA--DGNIKPDIAAPGQDILSSVANN-------------KYAKLSGTSMSAPLVAGIMGLLQKQYETQYPDM 431 (926)
T ss_dssp CTTSCCCBCT--TSCBSCCEEEECCCEEESSSCS-------------SSCEEESCTTHHHHHHHHHHHHHHHHHHSSSSS
T ss_pred ccccCCCCCC--CCccCceEECCCCCEEeeccCC-------------cceecCccchhHHHHHHHHHHHHHHHhccCCCC
Confidence 9999999996 6899999999999999999864 799999999999999999999964 59999
Q ss_pred CHHH----HHHHHHhcccccCCCCCCCCCCCCCCCCCCCCCCCcccCccccCCCCceeccCccchhhhcccCCCCcccee
Q 044578 571 SPAA----IKSALMTTAYVHDNTHNPLKDASSYEPSSPYDHGAGHINPVKALDPGLIYDINAQDYFDFLCSQKLTPMELQ 646 (769)
Q Consensus 571 sp~~----ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~G~G~vd~~~Al~~~lv~d~~~~d~~~~~~~~~~~~~~~~ 646 (769)
+|+| ||++||+||+++...+. ..++++++||+|+||+.+|+++.+ |||..++++.+
T Consensus 432 sp~~~~~~Iks~L~~TA~~~~~~~~-------~~~~~~~~~G~G~vn~~~A~~~~~-----------~l~~~~~~~~~-- 491 (926)
T 1xf1_A 432 TPSERLDLAKKVLMSSATALYDEDE-------KAYFSPRQQGAGAVDAKKASAATM-----------YVTDKDNTSSK-- 491 (926)
T ss_dssp HHHHHHHHHHHHHHHHSBCCEEGGG-------TEECCHHHHTTCBCCHHHHHHCSE-----------EEEESSSSCSC--
T ss_pred CHHHHHHHHHHHHHhcCCCcccCCC-------CccCChhccCCCccCHHHhcCCCe-----------EEEcCCCCcce--
Confidence 9997 99999999998753311 235678899999999999999854 57876654322
Q ss_pred eeeccccccccCCCCCCCCCCcCceeeeccCCCcceeEEEEEEEEEeCCC--CeeEEEEEeC--CCCcEEEEecCeEEEe
Q 044578 647 VFRKYANRTCRHSIAKPGDLNYPAISVVFPETANVSALTLRRTVTNVGPP--VSNYHVVVSP--FKGVAIKVEPQKLHFT 722 (769)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~~ln~ps~~~~~~~~~~~~~~~~~~tv~n~~~~--~~ty~~~v~~--~~g~~v~v~p~~~~~~ 722 (769)
|.+... . ..++++|||||+|+. ..+|++++.. |.+..++|+|..|.|.
T Consensus 492 ------------------------i~l~~~--~--~~~~~~~tv~N~g~~~~~~~y~~~v~~~~~~~~~~~v~p~~l~~~ 543 (926)
T 1xf1_A 492 ------------------------VHLNNV--S--DKFEVTVNVHNKSDKPQELYYQATVQTDKVDGKHFALAPKVLYET 543 (926)
T ss_dssp ------------------------EEEEEE--C--SEEEEEEEEEECSSSCEEEEEEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred ------------------------eecccc--C--ccEEEEEEEEEeCCCceeEEEEEEEEeccCCCceEEeccceeEec
Confidence 222211 1 467899999999985 4578888765 7788899888766554
Q ss_pred -------ecCeeEEEEEEEEeeC---------CCCCcEEEEEEEE--cCce-eEEeEEEEEee
Q 044578 723 -------KKYQKLSYKITFTTKS---------PETIPEFGGLIWK--DGVH-KVRSPIVITRL 766 (769)
Q Consensus 723 -------~~~~~~~~~vt~~~~~---------~~~~~~~G~~~~~--~~~~-~v~~P~~~~~~ 766 (769)
++||+++|+|||++.. +.+.++||+|+|+ ++.| .||+||++...
T Consensus 544 ~~~~vtv~ag~~~~~~vt~~~~~~~~~~~~~~~~~~~~~G~i~~~~~~~~~~~v~~P~~~~~g 606 (926)
T 1xf1_A 544 SWQKITIPANSSKQVTVPIDASRFSKDLLAQMKNGYFLEGFVRFKQDPTKEELMSIPYIGFRG 606 (926)
T ss_dssp CCEEEEECTTEEEEEEEEEECHHHHHHHHHHSTTCEEEEEEEEEESSTTSCCCEEEEEEEEES
T ss_pred cCCeEEECCCCEEEEEEEEEcCccchhhcccccCCcEEEEEEEEEeCCCCCCEEEeeeEEEec
Confidence 4599999999999852 3456999999999 5655 49999999865
No 4
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis}
Probab=100.00 E-value=4.3e-61 Score=548.96 Aligned_cols=368 Identities=32% Similarity=0.466 Sum_probs=290.2
Q ss_pred CCCeEEEEeCCCCCCCcccchHHHHHHHhhcccccCCCccEEEEecceeeEEEEEcCHHHHHHH-----------hcCCC
Q 044578 31 TKKTYIVQMDKSAMPESFSDHAEWFSSTVKSVAYKNDEDRIIYSYQTAFHGVAARLSEEEAERL-----------EQEDG 99 (769)
Q Consensus 31 ~~~~yIV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~~~y~~~~~g~~~~~~~~~l~~L-----------~~~p~ 99 (769)
+...|||+|++.... +.+.++++++ +.+++++|+ .++||+++++++++++| +++|+
T Consensus 34 ~~~~~iV~~~~~~~~-------~~~~~~~~~~-----g~~v~~~~~-~~~g~~~~l~~~~~~~l~~~~~~~~~~~~~~~~ 100 (539)
T 3afg_A 34 QEVSTIIMFDNQADK-------EKAVEILDFL-----GAKIKYNYH-IIPALAVKIKVKDLLIIAGLMDTGYFGNAQLSG 100 (539)
T ss_dssp CEEEEEEEESSHHHH-------HHHHHHHHHH-----TCEEEEECS-SSSEEEEEEEHHHHHHHTTCSCCC---CCCCTT
T ss_pred CceEEEEEECCCCCH-------HHHHHHHHhc-----CCeEEEEee-eeeEEEEEeCHHHHHHHHhhccccccccccCCC
Confidence 445799999975421 2223344444 378999997 79999999999999999 88999
Q ss_pred eeEEEeCeeeccccCCCCcccCcCCCCCCCccccCCCCCCcEEEEeccccCCCCCCcccCCCCCCCCccccccccCCCcc
Q 044578 100 VMAIFPETKYELHTTRSPLFLGLEPADSTSIWSQKVADYDVIVGVLDTGIWPESASFNDTGMTPVPAHWKGACETGRGFQ 179 (769)
Q Consensus 100 V~~v~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~~~ 179 (769)
|++|+++..+++.............+....+|..+++|+||+|||||||||++||+|.+
T Consensus 101 V~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~gv~VaViDtGid~~Hpdl~~--------------------- 159 (539)
T 3afg_A 101 VQFIQEDYVVKVAVETEGLDESAAQVMATNMWNLGYDGSGITIGIIDTGIDASHPDLQG--------------------- 159 (539)
T ss_dssp EEEEEECCEEECC-----------CCBCSCCBCCSCCCTTCEEEEEESBCCTTSGGGTT---------------------
T ss_pred eeEEEecccccccCccccCCccccccCcHhHHhcCCCCCCcEEEEEecCCCCCChHHhC---------------------
Confidence 99999999987753221000111222236789999999999999999999999999964
Q ss_pred cccCCceeEeeEecccchhhccCcccccCCCCCCCCCCCChhhhhHhhccCCCCCCCccccccccceeeccCceEEEEEE
Q 044578 180 KHHCNRKIVGARVFYRGYEAATGKINEQNEYKSPRDQDGHGTHTAATVAGSPVHGANLLGYAYGTARGMSTGARIAVYKV 259 (769)
Q Consensus 180 ~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv 259 (769)
++++.++|.++. ..+.|+.||||||||||||+..+. .|.+.||||+|+|+++|+
T Consensus 160 ------~i~~~~d~~~~~-------------~~~~D~~gHGThVAgiiag~~~~~-------~g~~~GvAp~A~l~~~kv 213 (539)
T 3afg_A 160 ------KVIGWVDFVNGK-------------TTPYDDNGHGTHVASIAAGTGAAS-------NGKYKGMAPGAKLVGIKV 213 (539)
T ss_dssp ------TEEEEEETTTCC-------------SSCCBSSSHHHHHHHHHHCCCGGG-------TTTTCCSCTTCEEEEEEC
T ss_pred ------CEeeeEECCCCC-------------CCCCCCCCCHHHHHHHHhCcCccC-------CCCEEEECCCCEEEEEEe
Confidence 355566665431 236789999999999999985432 234589999999999999
Q ss_pred eeCCC-CCHHHHHHHHHHHHhC----CCcEEEeccCCCCCCCccchHHHHHHHHHhcCcEEEEecCCCCCCCC--cccCC
Q 044578 260 CWSGG-CFSSDILSAVDRAVAD----GVNVLSISLGGGVSSYHRDSLSIATFGAMEMGVFVSCSAGNGGPDPV--SLTNV 332 (769)
Q Consensus 260 ~~~~g-~~~sdi~~ai~~a~~~----g~dVIn~SlG~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~G~~~~--~~~~~ 332 (769)
+++.| +..+++++||+||+++ |++|||||||........+.+..++.++.++|++||+||||+|+... ..++.
T Consensus 214 ~~~~g~~~~~~i~~ai~~a~~~~~~~g~~Vin~SlG~~~~~~~~~~l~~ai~~a~~~GvlvV~AAGN~g~~~~~~~~Pa~ 293 (539)
T 3afg_A 214 LNGQGSGSISDIINGVDWAVQNKDKYGIKVINLSLGSSQSSDGTDSLSQAVNNAWDAGLVVVVAAGNSGPNKYTVGSPAA 293 (539)
T ss_dssp SCTTSEEEHHHHHHHHHHHHHTHHHHTEEEEEECCCCCSCCCSCSHHHHHHHHHHHTTCEEEEECCSCCSSSSCCCTTTT
T ss_pred ecCCCCcCHHHHHHHHHHHHhhhhhcCCcEEEeCCCCCCCCccchHHHHHHHHHHhcCCEEEEECCCCCCCCCcccCCcc
Confidence 99877 7889999999999986 89999999998765555678888888999999999999999997644 45667
Q ss_pred CCceEEecCCCCCCceeeEEEeCCCcEEEEEEeccCCcCCCCCccccEEEecCCCCCCCCcccCCCCCCCCccceEEEEe
Q 044578 333 SPWITTVGASTLDRDFPATVKLGTGRTITGVSLYKGRRALLPNKQYPVVYMGSNSSNSSSLCLEGTLNPTTVAGKIVICD 412 (769)
Q Consensus 333 ~p~vitVgA~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~ 412 (769)
.+++|+|||.+.
T Consensus 294 ~~~vitVgA~~~-------------------------------------------------------------------- 305 (539)
T 3afg_A 294 ASKVITVGAVDK-------------------------------------------------------------------- 305 (539)
T ss_dssp CSSSEEEEEECT--------------------------------------------------------------------
T ss_pred CCceEEEeeecC--------------------------------------------------------------------
Confidence 889999997321
Q ss_pred CCCCchhhhhHHHhhcCceEEEEecCCCCCccccccccccceEEEChhhhHHHHHHHhcCCCceEEEEecceeecccCCC
Q 044578 413 RGISPRVQKGQVVKDAGGIGVILANTAANGEELVADCHLLPAVAVGEIEGKEIKQYASTSPKATASLALLGTRVGIKPSP 492 (769)
Q Consensus 413 ~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (769)
.+
T Consensus 306 ------------------------------------------------------------------------------~~ 307 (539)
T 3afg_A 306 ------------------------------------------------------------------------------YD 307 (539)
T ss_dssp ------------------------------------------------------------------------------TS
T ss_pred ------------------------------------------------------------------------------Cc
Confidence 12
Q ss_pred eeccccCCCCCCCCCCcccCeeeeCCCceeecccCCCCCCCCCCCccccceeeeccccchhhhhHHHHHHHHhhCCCCCH
Q 044578 493 VVAAFSSRGPNFLTLEILKPDIVAPGVNILAAWSGETGPSSLPADHRRVKFNILSGTSMSCPHVSGIAALLKARHPEWSP 572 (769)
Q Consensus 493 ~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lsp 572 (769)
.++.||||||+. ++++||||+|||++|+++++..... .+.....|..++|||||||||||++|||+|++|+|+|
T Consensus 308 ~~a~fSs~Gp~~--~~~~kpdi~APG~~I~s~~~~~~~~----~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~~s~ 381 (539)
T 3afg_A 308 VITDFSSRGPTA--DNRLKPEVVAPGNWIIAARASGTSM----GQPINDYYTAAPGTAMATPHVAGIAALLLQAHPSWTP 381 (539)
T ss_dssp CBCSSSCCCCCT--TCBCCCSEEEECSSEEEECCTTCCC----SEECSSSEEEECSHHHHHHHHHHHHHHHHHHCTTCCH
T ss_pred ccccccCCCCCC--CCCCcccEecCcCCEEeeccCCCCC----CCCCcccccccCchHHHHHHHHHHHHHHHHHCCCCCH
Confidence 678999999998 5899999999999999998653211 0111236999999999999999999999999999999
Q ss_pred HHHHHHHHhcccccCCCCCCCCCCCCCCCCCCCCCCCcccCccccCCCC
Q 044578 573 AAIKSALMTTAYVHDNTHNPLKDASSYEPSSPYDHGAGHINPVKALDPG 621 (769)
Q Consensus 573 ~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~G~G~vd~~~Al~~~ 621 (769)
++||++|++||+++...+ .++..||+|+||+.+|++..
T Consensus 382 ~~vk~~L~~tA~~~~~~~-----------~~~~~~G~G~vn~~~Al~~~ 419 (539)
T 3afg_A 382 DKVKTALIETADIVKPDE-----------IADIAYGAGRVNAYKAAYYD 419 (539)
T ss_dssp HHHHHHHHHHSBCSSGGG-----------CSBTTTBTCBCCHHHHHTGG
T ss_pred HHHHHHHHhhCccCCCCC-----------CCccCccCCccCHHHHhhhc
Confidence 999999999999774221 23458999999999999853
No 5
>2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A
Probab=100.00 E-value=1.1e-59 Score=520.70 Aligned_cols=344 Identities=27% Similarity=0.415 Sum_probs=280.5
Q ss_pred CCeEEEEeCCCCCCCcccchHHHHHHHhhcccccCCCccEEEEecceeeEEEEEcCHHHHHHHhcCCCeeEEEeCeeecc
Q 044578 32 KKTYIVQMDKSAMPESFSDHAEWFSSTVKSVAYKNDEDRIIYSYQTAFHGVAARLSEEEAERLEQEDGVMAIFPETKYEL 111 (769)
Q Consensus 32 ~~~yIV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~~~y~~~~~g~~~~~~~~~l~~L~~~p~V~~v~~~~~~~~ 111 (769)
+.+|||+||++... ++++++. +.+++++|. .+++|+++++++++++|+++|+|++|++++.+++
T Consensus 2 ~~~~iV~~~~~~~~----------~~~~~~~-----g~~v~~~~~-~~~~~~~~~~~~~~~~L~~~p~V~~v~~~~~~~~ 65 (395)
T 2z2z_A 2 TIRVIVSVDKAKFN----------PHEVLGI-----GGHIVYQFK-LIPAVVVDVPANAVGKLKKMPGVEKVEFDHQAVL 65 (395)
T ss_dssp EEEEEEEECTTTCC----------HHHHHHT-----TCEEEEECS-SSSEEEEEEEGGGHHHHHTSTTEEEEEECCEEEE
T ss_pred cEEEEEEECCCccH----------HHHHHHc-----CCEEEEEec-cCCEEEEEECHHHHHHHHcCCCceEEEEeeeecc
Confidence 46899999987431 2334433 478999998 5999999999999999999999999999998876
Q ss_pred ccCC-----------CCcccCcCCCCCCCccccCCCCCC--cEEEEeccccCCCCCCcccCCCCCCCCccccccccCCCc
Q 044578 112 HTTR-----------SPLFLGLEPADSTSIWSQKVADYD--VIVGVLDTGIWPESASFNDTGMTPVPAHWKGACETGRGF 178 (769)
Q Consensus 112 ~~~~-----------s~~~~g~~~~~~~~~~~~~~~G~G--v~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~~ 178 (769)
.... ....|++..++.+.+|..+ +|+| |+|||||||||++||+|.++
T Consensus 66 ~~~~~~~~~~~~~~~~~~~w~~~~i~~~~~w~~~-~G~g~~v~VaViDtGid~~Hp~l~~~------------------- 125 (395)
T 2z2z_A 66 LGKPSWLGGGSTQPAQTIPWGIERVKAPSVWSIT-DGSVSVIQVAVLDTGVDYDHPDLAAN------------------- 125 (395)
T ss_dssp CCEECC------CCSCCCCHHHHHTTCGGGGGTC-SSCCTTCEEEEEESCBCTTCTTTGGG-------------------
T ss_pred cCCCCcccccccCccccCCcchhhcCHHHHHhhc-CCCCCcEEEEEEcCCCCCCChhHhhc-------------------
Confidence 4321 1245777777668899998 9999 99999999999999999753
Q ss_pred ccccCCceeEeeEecccchhhccCcccccCCCCCCCCCCCChhhhhHhhccCCCCCCCccccccccceeeccCceEEEEE
Q 044578 179 QKHHCNRKIVGARVFYRGYEAATGKINEQNEYKSPRDQDGHGTHTAATVAGSPVHGANLLGYAYGTARGMSTGARIAVYK 258 (769)
Q Consensus 179 ~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~k 258 (769)
+...++|..+... ....++.|+.||||||||||+|.. ++ .| +.||||+|+|+.+|
T Consensus 126 --------~~~~~~~~~~~~~--------~~~~~~~d~~gHGT~vAgiia~~~-n~---~g-----~~GvAp~a~l~~~k 180 (395)
T 2z2z_A 126 --------IAWCVSTLRGKVS--------TKLRDCADQNGHGTHVIGTIAALN-ND---IG-----VVGVAPGVQIYSVR 180 (395)
T ss_dssp --------EEEEEECGGGCCB--------CCHHHHBCSSSHHHHHHHHHHCCC-SS---SS-----CCCSSTTCEEEEEE
T ss_pred --------cccCccccCCccc--------CCCCCCCCCCCCHHHHHHHHHeec-CC---Cc-----eEEECCCCEEEEEE
Confidence 3334444432100 000124678999999999999983 22 12 38999999999999
Q ss_pred EeeCCC-CCHHHHHHHHHHHHhC--------------------CCcEEEeccCCCCCCCccchHHHHHHHHHhcCcEEEE
Q 044578 259 VCWSGG-CFSSDILSAVDRAVAD--------------------GVNVLSISLGGGVSSYHRDSLSIATFGAMEMGVFVSC 317 (769)
Q Consensus 259 v~~~~g-~~~sdi~~ai~~a~~~--------------------g~dVIn~SlG~~~~~~~~~~~~~~~~~a~~~Gi~vV~ 317 (769)
++++.| +..+++++||+||+++ +++|||||||+... ...+..++.++.++|++||+
T Consensus 181 v~~~~g~~~~~~i~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~Vin~S~G~~~~---~~~~~~ai~~a~~~gv~vV~ 257 (395)
T 2z2z_A 181 VLDARGSGSYSDIAIGIEQAILGPDGVADKDGDGIIAGDPDDDAAEVISMSLGGPAD---DSYLYDMIIQAYNAGIVIVA 257 (395)
T ss_dssp CSCTTSEEEHHHHHHHHHHHHHTTTTCSSTTCSSCCTTCTTSCCCSEEEECEEBSCC---CHHHHHHHHHHHHTTCEEEE
T ss_pred EecCCCCccHHHHHHHHHHHHhCccccccccccccccccccCCCCeEEEecCCCCCC---CHHHHHHHHHHHHCCCEEEE
Confidence 998877 7888999999999988 99999999998542 34567777788999999999
Q ss_pred ecCCCCCCCCcccCCCCceEEecCCCCCCceeeEEEeCCCcEEEEEEeccCCcCCCCCccccEEEecCCCCCCCCcccCC
Q 044578 318 SAGNGGPDPVSLTNVSPWITTVGASTLDRDFPATVKLGTGRTITGVSLYKGRRALLPNKQYPVVYMGSNSSNSSSLCLEG 397 (769)
Q Consensus 318 AAGN~G~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~c~~~ 397 (769)
||||+|.....+++..|++|+|||.+.
T Consensus 258 AAGN~g~~~~~~Pa~~~~vi~Vga~~~----------------------------------------------------- 284 (395)
T 2z2z_A 258 ASGNEGAPSPSYPAAYPEVIAVGAIDS----------------------------------------------------- 284 (395)
T ss_dssp ECCSSCCSSCCBTTTSTTEEEEEEECT-----------------------------------------------------
T ss_pred ECCCCCCCCCCCccCCCCEEEEEEecC-----------------------------------------------------
Confidence 999999887788888999999998321
Q ss_pred CCCCCCccceEEEEeCCCCchhhhhHHHhhcCceEEEEecCCCCCccccccccccceEEEChhhhHHHHHHHhcCCCceE
Q 044578 398 TLNPTTVAGKIVICDRGISPRVQKGQVVKDAGGIGVILANTAANGEELVADCHLLPAVAVGEIEGKEIKQYASTSPKATA 477 (769)
Q Consensus 398 ~~~~~~~~g~ivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~ 477 (769)
T Consensus 285 -------------------------------------------------------------------------------- 284 (395)
T 2z2z_A 285 -------------------------------------------------------------------------------- 284 (395)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEecceeecccCCCeeccccCCCCCCCCCCcccCeeeeCCCceeecccCCCCCCCCCCCccccceeeeccccchhhhhH
Q 044578 478 SLALLGTRVGIKPSPVVAAFSSRGPNFLTLEILKPDIVAPGVNILAAWSGETGPSSLPADHRRVKFNILSGTSMSCPHVS 557 (769)
Q Consensus 478 ~~~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VA 557 (769)
.+.++.||++|| +|+|||++|+++++.+ .|..++||||||||||
T Consensus 285 -------------~~~~a~fS~~G~----------~v~APG~~i~s~~~~~-------------~y~~~sGTS~AaP~Va 328 (395)
T 2z2z_A 285 -------------NDNIASFSNRQP----------EVSAPGVDILSTYPDD-------------SYETLMGTAMATPHVS 328 (395)
T ss_dssp -------------TSCBCTTSCSSC----------SEEEECSSEEEEETTT-------------EEEEEESHHHHHHHHH
T ss_pred -------------CCCCCcccCCCC----------CEEeCCCCeeeecCCC-------------ceEecCCHHHHHHHHH
Confidence 136789999997 6799999999998864 7999999999999999
Q ss_pred HHHHHHHhhCC-------------CCCHHHHHHHHHhcccccCCCCCCCCCCCCCCCCCCCCCCCcccCccccCCC
Q 044578 558 GIAALLKARHP-------------EWSPAAIKSALMTTAYVHDNTHNPLKDASSYEPSSPYDHGAGHINPVKALDP 620 (769)
Q Consensus 558 G~aALl~q~~p-------------~lsp~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~G~G~vd~~~Al~~ 620 (769)
|++|||+|++| .|++.+||++|++||+++... ..+..||||+||+.+|++.
T Consensus 329 G~aAll~~~~p~~~~~~~~~~~~~~ls~~~v~~~L~~tA~~~~~~------------g~~~~~G~G~vd~~~A~~~ 392 (395)
T 2z2z_A 329 GVVALIQAAYYQKYGKILPVGTFDDISKNTVRGILHITADDLGPT------------GWDADYGYGVVRAALAVQA 392 (395)
T ss_dssp HHHHHHHHHHHHHHSSCCCCCCTTCCSSSSHHHHHHHHSBCCSSS------------SSBTTTBTCBCCHHHHHHH
T ss_pred HHHHHHHHhCccccccccccccccCCCHHHHHHHHHhhccccCCC------------CCCCCccCceeCHHHHHHH
Confidence 99999999999 999999999999999987432 2245899999999999874
No 6
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens}
Probab=100.00 E-value=1.1e-59 Score=539.20 Aligned_cols=336 Identities=23% Similarity=0.241 Sum_probs=60.7
Q ss_pred CeEEEEeCCCCCCCcccchHHHHHHHhhcccccCCCccEEEEecceeeEEEEEcCHHHHHHHhcCCCeeEEEeCeeeccc
Q 044578 33 KTYIVQMDKSAMPESFSDHAEWFSSTVKSVAYKNDEDRIIYSYQTAFHGVAARLSEEEAERLEQEDGVMAIFPETKYELH 112 (769)
Q Consensus 33 ~~yIV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~~~y~~~~~g~~~~~~~~~l~~L~~~p~V~~v~~~~~~~~~ 112 (769)
++|||+||++...+....+.+++...+.+. ....++.+.|.+.|+||+++++++++++|+++|+|++||+++.++.+
T Consensus 76 g~YIV~lk~~~~~~~~~~~~~~l~a~~~~~---g~~~~v~~~y~~~~~Gfsv~l~~~~l~~L~~~P~V~~Vepd~~v~~~ 152 (692)
T 2p4e_P 76 GTYVVVLKEETHLSQSERTARRLQAQAARR---GYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVFAQ 152 (692)
T ss_dssp EEEEEEECTTCCHHHHHHHHHHHHHHHHHT---TCCCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEEEEEEEC
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHHHHhhc---ccccceeeEeeccccEEEEEeCHHHHHHHHcCCCceEEEeccccccC
Confidence 499999999887554444445554433322 23468999999999999999999999999999999999999987652
Q ss_pred cCCCCcccCcCCCCCC----CccccCCCCCCcEEEEeccccCCCCCCcccCCCCCCCCccccccccCCCcccccCCceeE
Q 044578 113 TTRSPLFLGLEPADST----SIWSQKVADYDVIVGVLDTGIWPESASFNDTGMTPVPAHWKGACETGRGFQKHHCNRKIV 188 (769)
Q Consensus 113 ~~~s~~~~g~~~~~~~----~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~~~~~~~n~ki~ 188 (769)
...|++.++... ..|..+.+|+||+|+|||||||++||+|.++. .|. +|
T Consensus 153 ----~~pWgL~~i~~~~~~~~~w~~~~~G~GV~VaVIDTGId~~HpdL~gr~------~~~-------~~---------- 205 (692)
T 2p4e_P 153 ----SIPWNLERITPPRYRADEYQPPDGGSLVEVYLLDTSIQSDHREIEGRV------MVT-------DF---------- 205 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ----CCCcchhhcccccccccccccCCCCCCcEEEEEcCCCCCCChhhcCce------Eec-------cc----------
Confidence 234777665432 36888889999999999999999999998641 010 00
Q ss_pred eeEecccchhhccCcccccCCCCCCCCCCCChhhhhHhhccCCCCCCCccccccccceeeccCceEEEEEEeeCCC-CCH
Q 044578 189 GARVFYRGYEAATGKINEQNEYKSPRDQDGHGTHTAATVAGSPVHGANLLGYAYGTARGMSTGARIAVYKVCWSGG-CFS 267 (769)
Q Consensus 189 g~~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~ 267 (769)
.+..+. ++ ......+.|..||||||||||+|+. .||||+|+|++|||+++.| ++.
T Consensus 206 ---~~~~d~---dg----~~~~~~~~D~~GHGTHVAGiIAg~~--------------~GVAP~A~L~~vKVl~~~G~g~~ 261 (692)
T 2p4e_P 206 ---ENVPEE---DG----TRFHRQASKCDSHGTHLAGVVSGRD--------------AGVAKGASMRSLRVLNCQGKGTV 261 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ---ccccCC---CC----CcccCCCCCCCCcHHHhhhHhhcCC--------------CccCCCCEEEEEEeecCCCCCCH
Confidence 000000 00 0001246789999999999999873 7999999999999999877 788
Q ss_pred HHHHHHHHHHHhC------CCcEEEeccCCCCCCCccchHHHHHHHHHhcCcEEEEecCCCCCCCC-cccCCCCceEEec
Q 044578 268 SDILSAVDRAVAD------GVNVLSISLGGGVSSYHRDSLSIATFGAMEMGVFVSCSAGNGGPDPV-SLTNVSPWITTVG 340 (769)
Q Consensus 268 sdi~~ai~~a~~~------g~dVIn~SlG~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~~p~vitVg 340 (769)
+++++||+|++++ +++|||||||+..+ +.+..++.++.++|++||+||||+|.+.. ..++..|++|+||
T Consensus 262 s~ii~aI~~a~~~~~~~~~g~~VINmSlGg~~s----~~l~~Ai~~A~~~GVlvVaAAGN~G~~~~~~sPA~~~~vItVG 337 (692)
T 2p4e_P 262 SGTLIGLEFIRKSQLVQPVGPLVVLLPLAGGYS----RVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPEVITVG 337 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhhhhcccCCceEEEecCCCCCc----HHHHHHHHHHHHCCCEEEEECCCCCCCCCccCcccCCCEEEEE
Confidence 8999999999986 89999999997543 34455556888999999999999997754 3477889999999
Q ss_pred CCCCCCceeeEEEeCCCcEEEEEEeccCCcCCCCCccccEEEecCCCCCCCCcccCCCCCCCCccceEEEEeCCCCchhh
Q 044578 341 ASTLDRDFPATVKLGTGRTITGVSLYKGRRALLPNKQYPVVYMGSNSSNSSSLCLEGTLNPTTVAGKIVICDRGISPRVQ 420 (769)
Q Consensus 341 A~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~ 420 (769)
|++.+...
T Consensus 338 A~d~~~~~------------------------------------------------------------------------ 345 (692)
T 2p4e_P 338 ATNAQDQP------------------------------------------------------------------------ 345 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEcCCCCc------------------------------------------------------------------------
Confidence 85421100
Q ss_pred hhHHHhhcCceEEEEecCCCCCccccccccccceEEEChhhhHHHHHHHhcCCCceEEEEecceeecccCCCeeccccCC
Q 044578 421 KGQVVKDAGGIGVILANTAANGEELVADCHLLPAVAVGEIEGKEIKQYASTSPKATASLALLGTRVGIKPSPVVAAFSSR 500 (769)
Q Consensus 421 ~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fSS~ 500 (769)
...-+.||+|
T Consensus 346 ----------------------------------------------------------------------a~~ss~fSn~ 355 (692)
T 2p4e_P 346 ----------------------------------------------------------------------VTLGTLGTNF 355 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ----------------------------------------------------------------------cccccccCCC
Confidence 0001238999
Q ss_pred CCCCCCCCcccCeeeeCCCceeecccCCCCCCCCCCCccccceeeeccccchhhhhHHHHHHHHhhCCCCCHHHHHHHHH
Q 044578 501 GPNFLTLEILKPDIVAPGVNILAAWSGETGPSSLPADHRRVKFNILSGTSMSCPHVSGIAALLKARHPEWSPAAIKSALM 580 (769)
Q Consensus 501 GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lsp~~ik~~L~ 580 (769)
||. |||+|||++|+++++... ..|..++|||||||||||++|||+|++|+|+|++||++|+
T Consensus 356 G~~--------vDI~APG~~I~St~~~~~-----------~~y~~~SGTSmAAPhVAG~aALlls~~P~ltp~qVk~~L~ 416 (692)
T 2p4e_P 356 GRC--------VDLFAPGEDIIGASSDCS-----------TCFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLI 416 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCc--------eeEEecCCcEEeeccCCC-----------CceEeccchHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
Confidence 984 599999999999987642 2789999999999999999999999999999999999999
Q ss_pred hcccccC
Q 044578 581 TTAYVHD 587 (769)
Q Consensus 581 ~TA~~~~ 587 (769)
+||.+..
T Consensus 417 ~tA~~~~ 423 (692)
T 2p4e_P 417 HFSAKDV 423 (692)
T ss_dssp -------
T ss_pred Hhccccc
Confidence 9998653
No 7
>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A
Probab=100.00 E-value=3.2e-57 Score=513.94 Aligned_cols=358 Identities=20% Similarity=0.283 Sum_probs=279.8
Q ss_pred CCCeEEEEeCCCCCCCcccchHHHHHHHhhcccccCCCccEEEEecceeeEEEEEcCHHHHHHHhc-CCCeeEEEeCeee
Q 044578 31 TKKTYIVQMDKSAMPESFSDHAEWFSSTVKSVAYKNDEDRIIYSYQTAFHGVAARLSEEEAERLEQ-EDGVMAIFPETKY 109 (769)
Q Consensus 31 ~~~~yIV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~~~y~~~~~g~~~~~~~~~l~~L~~-~p~V~~v~~~~~~ 109 (769)
+.+.|||++++.. .+.+++++. +.++++.|. .+++|+++++++++++|++ +|+|++|+++..+
T Consensus 43 ~~~~yiv~~~~~~----------~~~~~~~~~-----g~~v~~~~~-~~~~~~~~~~~~~~~~L~~~~p~V~~v~~~~~~ 106 (471)
T 3t41_A 43 EELYYSVEYKNTA----------TFNKLVKKK-----SLNVVYNIP-ELHVAQIKMTKMHANALANYKNDIKYINATCST 106 (471)
T ss_dssp CCEEEEEEESCHH----------HHHHHHHHH-----TCEEEEEEG-GGTEEEEEECHHHHHHHHTCTTTEEEEEECCSS
T ss_pred CceEEEEEcCCHH----------HHHHHHHhC-----CCEEEEecC-CccEEEEEeCHHHHHHHHhcCCCCcEEEeccee
Confidence 3457899777533 234455555 378889986 5999999999999999999 9999999999888
Q ss_pred ccccCCC----------CcccCcCCCCCC-CccccCCCCCCcEEEEeccccCCCCCCcccCCCCCCCCccccccccCCCc
Q 044578 110 ELHTTRS----------PLFLGLEPADST-SIWSQKVADYDVIVGVLDTGIWPESASFNDTGMTPVPAHWKGACETGRGF 178 (769)
Q Consensus 110 ~~~~~~s----------~~~~g~~~~~~~-~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~~ 178 (769)
++..... ...|++..+... .+|..+.+|+||+|||||||||++||+|.++ .|.+
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~w~l~~i~~~~~~~~~~~~G~gv~VaViDtGid~~Hp~~~~~-------~~~~-------- 171 (471)
T 3t41_A 107 CITSEKTIDRTSNESLFSRQWDMNKITNNGASYDDLPKHANTKIAIIDTGVMKNHDDLKNN-------FSTD-------- 171 (471)
T ss_dssp CBCCCCCCCC---CCSCCCCHHHHTTTTTTGGGGGCCSSCCCCEEEEESCCCTTCTTTTTT-------BCTT--------
T ss_pred ccccccccccCCCCccccccccHhhccCcHHHHhccCCCCCcEEEEEeCCCCCCChhHhcC-------cccC--------
Confidence 7754322 134666666544 6899999999999999999999999999864 1111
Q ss_pred ccccCCceeEeeEecccchhhccCcccccCCCCCCCCCCCChhhhhHhhccCCCCCCCccccccccceeeccCceEEEEE
Q 044578 179 QKHHCNRKIVGARVFYRGYEAATGKINEQNEYKSPRDQDGHGTHTAATVAGSPVHGANLLGYAYGTARGMSTGARIAVYK 258 (769)
Q Consensus 179 ~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~k 258 (769)
.+.|..+..+.............+.|..||||||||||+|++. +.||||+|+|+++|
T Consensus 172 -----------~~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGT~vAgiiaa~g~------------~~GvAp~a~l~~~k 228 (471)
T 3t41_A 172 -----------SKNLVPLNGFRGTEPEETGDVHDVNDRKGHGTMVSGQTSANGK------------LIGVAPNNKFTMYR 228 (471)
T ss_dssp -----------CEECCCTTCGGGCCTTCCCCTTCCCCSSSHHHHHHHHHHCBSS------------SBCSSTTSCEEEEE
T ss_pred -----------CcccccCCCccCCCcccCCCCCCCcCCCCccchhhheeecCCc------------eeEECCCCeEEEEE
Confidence 1111111111111111112233577899999999999998742 48999999999999
Q ss_pred EeeCCCCCHHHHHHHHHHHHhCCCcEEEeccCCCCC-------------CCccchHHHHHHHHHhcCcEEEEecCCCCCC
Q 044578 259 VCWSGGCFSSDILSAVDRAVADGVNVLSISLGGGVS-------------SYHRDSLSIATFGAMEMGVFVSCSAGNGGPD 325 (769)
Q Consensus 259 v~~~~g~~~sdi~~ai~~a~~~g~dVIn~SlG~~~~-------------~~~~~~~~~~~~~a~~~Gi~vV~AAGN~G~~ 325 (769)
++++.++..+++++||+||++++++|||||||.... ....+.+..++..+.++|++||+||||+|..
T Consensus 229 v~~~~~~~~~~i~~ai~~a~~~g~~Vin~S~G~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~a~~~Gi~vV~AAGN~g~~ 308 (471)
T 3t41_A 229 VFGSKKTELLWVSKAIVQAANDGNQVINISVGSYIILDKNDHQTFRKDEKVEYDALQKAINYAKKKKSIVVAAAGNDGID 308 (471)
T ss_dssp CCSSSCCCHHHHHHHHHHHHHTTCSEEEECCCEEEEECTTCCCSEESSCHHHHHHHHHHHHHHHHTTCEEEEECCSSCCB
T ss_pred eccCCCCcHHHHHHHHHHHHhCCCCEEEeCCCCCCCCccccccccccccchhHHHHHHHHHHHHhCCCEEEEEcCCCCcC
Confidence 998866899999999999999999999999997320 0223567778888899999999999999976
Q ss_pred CC------------------cccCCCCceEEecCCCCCCceeeEEEeCCCcEEEEEEeccCCcCCCCCccccEEEecCCC
Q 044578 326 PV------------------SLTNVSPWITTVGASTLDRDFPATVKLGTGRTITGVSLYKGRRALLPNKQYPVVYMGSNS 387 (769)
Q Consensus 326 ~~------------------~~~~~~p~vitVgA~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 387 (769)
.. ..++..|++|+|||++.
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~Pa~~~~vitVgA~~~------------------------------------------- 345 (471)
T 3t41_A 309 VNDKQKLKLQREYQGNGEVKDVPASMDNVVTVGSTDQ------------------------------------------- 345 (471)
T ss_dssp TTCHHHHHHTTTCCSSSEEEEETTTSTTEEEEEEECT-------------------------------------------
T ss_pred CCcccccccccccccCCceeeccccCCCeEEEEeeCC-------------------------------------------
Confidence 53 25677888999987321
Q ss_pred CCCCCcccCCCCCCCCccceEEEEeCCCCchhhhhHHHhhcCceEEEEecCCCCCccccccccccceEEEChhhhHHHHH
Q 044578 388 SNSSSLCLEGTLNPTTVAGKIVICDRGISPRVQKGQVVKDAGGIGVILANTAANGEELVADCHLLPAVAVGEIEGKEIKQ 467 (769)
Q Consensus 388 ~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~ 467 (769)
T Consensus 346 -------------------------------------------------------------------------------- 345 (471)
T 3t41_A 346 -------------------------------------------------------------------------------- 345 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhcCCCceEEEEecceeecccCCCeeccccCCCCCCCCCCcccCeeeeCCCc----------------------eeecc
Q 044578 468 YASTSPKATASLALLGTRVGIKPSPVVAAFSSRGPNFLTLEILKPDIVAPGVN----------------------ILAAW 525 (769)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~----------------------I~sa~ 525 (769)
.+.++.||++||+. |||+|||++ |++++
T Consensus 346 -----------------------~~~~a~fS~~G~~~-------~di~APG~~i~~~~~~g~~~~~~~~~~~~~~i~s~~ 395 (471)
T 3t41_A 346 -----------------------KSNLSEFSNFGMNY-------TDIAAPGGSFAYLNQFGVDKWMNEGYMHKENILTTA 395 (471)
T ss_dssp -----------------------TSSBCTTCCBCTTT-------CCEEEECCCCHHHHHHHHHHHHHTTTHHHHSEEEEC
T ss_pred -----------------------CCCCCCccCCCCCC-------CeEEecCCCcccccccccccccccccccCceeEecC
Confidence 23678999999964 499999987 88887
Q ss_pred cCCCCCCCCCCCccccceeeeccccchhhhhHHHHHHHHhhCC-CCCHHHHHHHHHhcccccCCCCCCCCCCCCCCCCCC
Q 044578 526 SGETGPSSLPADHRRVKFNILSGTSMSCPHVSGIAALLKARHP-EWSPAAIKSALMTTAYVHDNTHNPLKDASSYEPSSP 604 (769)
Q Consensus 526 ~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p-~lsp~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~ 604 (769)
+.+ .|..++|||||||||||++|||+|++| .++|++||++|++||.+... .+.
T Consensus 396 ~~~-------------~~~~~sGTS~AaP~VAG~aAll~~~~p~~~~~~~v~~~L~~tA~~~~~-------------~~~ 449 (471)
T 3t41_A 396 NNG-------------RYIYQAGTALATPKVSGALALIIDKYHLEKHPDKAIELLYQHGTSKNN-------------KPF 449 (471)
T ss_dssp TTS-------------SEEEECSHHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHSBCCSC-------------CCH
T ss_pred CCC-------------CEEeecchHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhCCCCCC-------------CCc
Confidence 764 799999999999999999999999999 89999999999999987632 344
Q ss_pred CCCCCcccCccccCCCC
Q 044578 605 YDHGAGHINPVKALDPG 621 (769)
Q Consensus 605 ~~~G~G~vd~~~Al~~~ 621 (769)
..||||+||+.+|++..
T Consensus 450 ~~~G~G~vd~~~Al~~a 466 (471)
T 3t41_A 450 SRYGHGELDVYKALNVA 466 (471)
T ss_dssp HHHTTCBBCHHHHTTTT
T ss_pred CccccChhCHHHHHHHH
Confidence 58999999999999854
No 8
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1
Probab=100.00 E-value=1.1e-55 Score=509.74 Aligned_cols=377 Identities=25% Similarity=0.316 Sum_probs=279.4
Q ss_pred ccCCCCeEEEEeCCCCCCCcccchHHHHHHHhhcccccCCCccEEEEecceeeEEEEEcCH----HHHHHHh--cCCCee
Q 044578 28 VESTKKTYIVQMDKSAMPESFSDHAEWFSSTVKSVAYKNDEDRIIYSYQTAFHGVAARLSE----EEAERLE--QEDGVM 101 (769)
Q Consensus 28 ~~~~~~~yIV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~~~y~~~~~g~~~~~~~----~~l~~L~--~~p~V~ 101 (769)
....+++|||+||+... .+++++.+ +.++.+++. .+++++++++. +.+++|+ ++|+|+
T Consensus 27 ~~~~~~~~IV~~k~~~~----------~~~~~~~~-----g~~v~~~~~-~i~~~~~~~~~~~~~~~~~~l~~~~~~~V~ 90 (671)
T 1r6v_A 27 GEYTEGKILVGYNDRSE----------VDKIVKAV-----NGKVVLELP-QIKVVSIKLNGMTVKQAYDKIKALALKGIR 90 (671)
T ss_dssp TSBCTTEEEEEESSHHH----------HHHHHHHH-----TCEEEEEEG-GGTEEEEECSSCCHHHHHHHHTTSCCSSEE
T ss_pred CccCCccEEEEECCCcC----------HHHHHHhc-----CCeEEEEcC-CCcEEEEEeCCcCHHHHHHHHHhccCCCce
Confidence 34468999999997431 22334433 357788887 78999999864 3456776 489999
Q ss_pred EEEeCeeeccccC---------------------------CCCcccCcCCCCCCCc-cccCCCCCCcEEEEeccccCCCC
Q 044578 102 AIFPETKYELHTT---------------------------RSPLFLGLEPADSTSI-WSQKVADYDVIVGVLDTGIWPES 153 (769)
Q Consensus 102 ~v~~~~~~~~~~~---------------------------~s~~~~g~~~~~~~~~-~~~~~~G~Gv~VgVIDtGid~~H 153 (769)
+|||+..+++... .....|++..++.+.+ |+. .+|+||+|||||||||++|
T Consensus 91 ~vepd~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~l~~I~~~~a~w~~-~tG~gV~VAVIDTGVd~~H 169 (671)
T 1r6v_A 91 YVEPSYKRELIKPTVVKPNPDMYKIRKPGLNSTARDYGEELSNELWGLEAIGVTQQLWEE-ASGTNIIVAVVDTGVDGTH 169 (671)
T ss_dssp EEECCBCCEECCCEECCCCTTTTCSSSSCCSSSTTCCSSTTGGGCHHHHHTTCCHHHHHH-CSCTTCEEEEEESCCBTTS
T ss_pred EEecCeEEEeccccccCcccccccccccccccccccccccccccCCchhccCCchhhhhc-cCCCCCEEEEEeCCCCCCC
Confidence 9999976543210 0113567766666777 888 8999999999999999999
Q ss_pred CCcccCCCCCCCCccccccccCCCcccccCCceeEeeEecccchhhccCcccccCCCCCCCCCCCChhhhhHhhccCCCC
Q 044578 154 ASFNDTGMTPVPAHWKGACETGRGFQKHHCNRKIVGARVFYRGYEAATGKINEQNEYKSPRDQDGHGTHTAATVAGSPVH 233 (769)
Q Consensus 154 p~f~~~~~~~~~~~w~g~~~~g~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAGiiag~~~~ 233 (769)
|+|.++ .+. +...+.+.. .....+..|.+||||||||||||..+
T Consensus 170 pdL~~~-------~~~-------------------g~~~~~~~~---------~p~~~d~~d~~gHGThVAGiIAa~~n- 213 (671)
T 1r6v_A 170 PDLEGQ-------VIA-------------------GYRPAFDEE---------LPAGTDSSYGGSAGTHVAGTIAAKKD- 213 (671)
T ss_dssp GGGTTT-------BCC-------------------EEEGGGTEE---------ECTTCBCCTTCSHHHHHHHHHHCCCS-
T ss_pred cccccc-------EEe-------------------cccccCCCc---------CCCCCCCccCCCcchhhhhhhhccCC-
Confidence 999754 110 111111100 00111245678999999999999742
Q ss_pred CCCccccccccceeeccCceEEEEEEeeC------CC-CCHHHHHHHHHHHHhCCCcEEEeccCCCCCCCccchHHHHHH
Q 044578 234 GANLLGYAYGTARGMSTGARIAVYKVCWS------GG-CFSSDILSAVDRAVADGVNVLSISLGGGVSSYHRDSLSIATF 306 (769)
Q Consensus 234 ~~~~~G~~~g~~~GvAP~A~l~~~kv~~~------~g-~~~sdi~~ai~~a~~~g~dVIn~SlG~~~~~~~~~~~~~~~~ 306 (769)
+ .| +.||||+|+|+.+|+++. .+ .....+++||+||+++|++|||||||+.. ....+..++.
T Consensus 214 g---~g-----v~GVAP~A~I~~vkv~~~~~~~~g~g~~s~~~i~~ai~~A~~~gadVIN~SlG~~~---~s~~l~~Ai~ 282 (671)
T 1r6v_A 214 G---KG-----IVGVAPGAKIMPIVIFDDPALVGGNGYVGDDYVAAGIIWATDHGAKVMNHSWGGWG---YSYTMKEAFD 282 (671)
T ss_dssp S---SS-----CCCSCTTSEEEEEESBCCHHHHCTTSBCCHHHHHHHHHHHHHTTCSEEEECEEBSC---CCHHHHHHHH
T ss_pred C---Cc-----eEEECCCCEEEEEEeccCccccCCCCccCHHHHHHHHHHHHHcCCCEEEeCCCCCC---CCHHHHHHHH
Confidence 2 12 389999999999999986 23 44567899999999999999999999753 2356777888
Q ss_pred HHHhcCcEEEEecCCCCCCC-CcccCCCCceEEecCCCCCCceeeEEEeCCCcEEEEEEeccCCcCCCCCccccEEEecC
Q 044578 307 GAMEMGVFVSCSAGNGGPDP-VSLTNVSPWITTVGASTLDRDFPATVKLGTGRTITGVSLYKGRRALLPNKQYPVVYMGS 385 (769)
Q Consensus 307 ~a~~~Gi~vV~AAGN~G~~~-~~~~~~~p~vitVgA~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 385 (769)
+|.++|+++|+||||+|... ..+++..|++|+|||.+.+.
T Consensus 283 ~A~~~GvlvVaAAGN~g~~~~~~yPA~~~~VItVgA~d~~g--------------------------------------- 323 (671)
T 1r6v_A 283 YAMEHGVVMVVSAGNNTSDSHHQYPAGYPGVIQVAALDYYG--------------------------------------- 323 (671)
T ss_dssp HHHHTTCEEEEECCSCSSSCCCCBTTTSTTCEEEEEEEEET---------------------------------------
T ss_pred HHHhCCCEEEEeCCCCCCCCCccCcccCCCeEEEEEEcCCC---------------------------------------
Confidence 89999999999999999775 56778889999999842110
Q ss_pred CCCCCCCcccCCCCCCCCccceEEEEeCCCCchhhhhHHHhhcCceEEEEecCCCCCccccccccccceEEEChhhhHHH
Q 044578 386 NSSNSSSLCLEGTLNPTTVAGKIVICDRGISPRVQKGQVVKDAGGIGVILANTAANGEELVADCHLLPAVAVGEIEGKEI 465 (769)
Q Consensus 386 ~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~~~~l 465 (769)
T Consensus 324 -------------------------------------------------------------------------------- 323 (671)
T 1r6v_A 324 -------------------------------------------------------------------------------- 323 (671)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhcCCCceEEEEecceeecccCCCeeccccCCCCCCCCCCcccCeeeeCCCceeecccCCCCCCC-----CCCCccc
Q 044578 466 KQYASTSPKATASLALLGTRVGIKPSPVVAAFSSRGPNFLTLEILKPDIVAPGVNILAAWSGETGPSS-----LPADHRR 540 (769)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~-----~~~~~~~ 540 (769)
....++.||++||.. ||+|||++|+++++....... .......
T Consensus 324 ------------------------~~~~~a~fSn~G~~v--------dv~APG~~I~St~p~~~~~g~~~~~~~~~~~~~ 371 (671)
T 1r6v_A 324 ------------------------GTFRVAGFSSRSDGV--------SVGAPGVTILSTVPGEDSIGYEGHNENVPATNG 371 (671)
T ss_dssp ------------------------TEEEECSSSCCCTTE--------EEEEECSSEEEECCCTTSTTCCCCCTTCCCSSS
T ss_pred ------------------------CceeeccccCCCCCe--------eEEecCCCEEeecCCCCccccccccccccccCC
Confidence 001578999999976 999999999999876421100 0001123
Q ss_pred cceeeeccccchhhhhHHHHHHHHhhCCCCCHHHHHHHHHhcccccCCCCCCCCCCCCCCCCCCCCCCCcccCccccCCC
Q 044578 541 VKFNILSGTSMSCPHVSGIAALLKARHPEWSPAAIKSALMTTAYVHDNTHNPLKDASSYEPSSPYDHGAGHINPVKALDP 620 (769)
Q Consensus 541 ~~y~~~sGTSmAaP~VAG~aALl~q~~p~lsp~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~G~G~vd~~~Al~~ 620 (769)
..|..++|||||||||||++|||+|++|+|+|.+||++|++||+++...+ .+..||||+||+.+|++.
T Consensus 372 ~~y~~~sGTSmAAP~VAGvaALl~s~~P~lt~~~Vr~~L~~TA~~~~~~g------------~d~~~G~G~vna~~Al~~ 439 (671)
T 1r6v_A 372 GTYDYYQGTSMAAPHVTGVVAVLLQKFPNAKPWQIRKLLENTAFDFNGNG------------WDHDTGYGLVKLDAALQG 439 (671)
T ss_dssp CCEEEEESHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCSSSSS------------CBTTTBTCBCCHHHHHHC
T ss_pred CceEEecCccHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcCCCCCC------------CCCCcccceeCHHHHhhh
Confidence 47999999999999999999999999999999999999999999875322 235899999999999998
Q ss_pred CceeccCccch
Q 044578 621 GLIYDINAQDY 631 (769)
Q Consensus 621 ~lv~d~~~~d~ 631 (769)
.|..+....||
T Consensus 440 ~l~~~~~~~~~ 450 (671)
T 1r6v_A 440 PLPTQGGVEEF 450 (671)
T ss_dssp CCCSSSEEEEE
T ss_pred hcCCCCCccce
Confidence 88766555444
No 9
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=100.00 E-value=4e-55 Score=491.17 Aligned_cols=387 Identities=26% Similarity=0.367 Sum_probs=281.1
Q ss_pred cccCcCCCCCCCccccCCCCCCcEEEEeccccCCCCCCcccCCCCCCCCccccccccCCCcccccCCceeEeeEecccch
Q 044578 118 LFLGLEPADSTSIWSQKVADYDVIVGVLDTGIWPESASFNDTGMTPVPAHWKGACETGRGFQKHHCNRKIVGARVFYRGY 197 (769)
Q Consensus 118 ~~~g~~~~~~~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~~~~~~~n~ki~g~~~~~~~~ 197 (769)
..|+++.++.+.+|+.+ |+||+|||||||||++||+|.++ .| ..+++...
T Consensus 4 ~~W~l~~i~~~~~w~~~--g~gv~VaViDtGvd~~Hp~l~~~-------~~--------------------~~~~~~~~- 53 (441)
T 1y9z_A 4 TPWGQTFVGATVLSDSQ--AGNRTICIIDSGYDRSHNDLNAN-------NV--------------------TGTNNSGT- 53 (441)
T ss_dssp CCHHHHHTTCSSSCCTT--GGGCEEEEEESCCCTTSTTTTTS-------EE--------------------EECCCTTS-
T ss_pred CCCChhhcChhhhhhcC--CCCcEEEEEcCCCCCCChhHhcC-------cc--------------------cCcccCCC-
Confidence 45888888778899875 77999999999999999999753 11 11111110
Q ss_pred hhccCcccccCCCCCCCCCCCChhhhhHhhccCCCCCCCccccccccceeeccCc--eEEEEEEeeCCC-CCHHHHHHHH
Q 044578 198 EAATGKINEQNEYKSPRDQDGHGTHTAATVAGSPVHGANLLGYAYGTARGMSTGA--RIAVYKVCWSGG-CFSSDILSAV 274 (769)
Q Consensus 198 ~~~~~~~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A--~l~~~kv~~~~g-~~~sdi~~ai 274 (769)
.....+.|..||||||||||+|..++ .| +.||||+| +|+.+|+++..| +..+++++||
T Consensus 54 ----------~~~~~~~d~~gHGT~vAgiia~~~~~----~g-----~~GvAP~a~~~l~~~kv~~~~g~~~~~~~~~ai 114 (441)
T 1y9z_A 54 ----------GNWYQPGNNNAHGTHVAGTIAAIANN----EG-----VVGVMPNQNANIHIVKVFNEAGWGYSSSLVAAI 114 (441)
T ss_dssp ----------CCTTCCCSSCCHHHHHHHHHHCCCSS----SB-----CCCSSCSSCSEEEEEECEETTEECCSSCHHHHH
T ss_pred ----------CCCCCCCCCCCcHHHHHHHHhcccCC----CC-----ceEecCCCCCEEEEEEEeCCCCCcCHHHHHHHH
Confidence 01224678899999999999998532 12 48999995 999999999877 7888999999
Q ss_pred HHHHhC-CCcEEEeccCCCCCCCccchHHHHHHHHHhcCcEEEEecCCCCCCCCcccCCCCceEEecCCCCCCceeeE--
Q 044578 275 DRAVAD-GVNVLSISLGGGVSSYHRDSLSIATFGAMEMGVFVSCSAGNGGPDPVSLTNVSPWITTVGASTLDRDFPAT-- 351 (769)
Q Consensus 275 ~~a~~~-g~dVIn~SlG~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgA~~~~~~~~~~-- 351 (769)
+||+++ |++|||||||.... ...+..++.++.++|++||+||||+|.....+++..+++|+|||.+.+.....+
T Consensus 115 ~~a~~~~g~~Vin~S~G~~~~---~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~VgA~~~~~~~~~~S~ 191 (441)
T 1y9z_A 115 DTCVNSGGANVVTMSLGGSGS---TTTERNALNTHYNNGVLLIAAAGNAGDSSYSYPASYDSVMSVAAVDSNLDHAAFSQ 191 (441)
T ss_dssp HHHHHTTCCSEEEECCCBSCC---BHHHHHHHHHHHHTTCEEEEECCSSSSSBCCBTTTSTTEEEEEEECTTCCBCTTSC
T ss_pred HHHHHhcCCcEEEeCCCCCCC---CHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCCCCCCCeEEEEEECCCCCCCcccc
Confidence 999999 99999999997542 235666777899999999999999998878888899999999998776432111
Q ss_pred -----------------EEeCCCc----EEEEEEeccCCcCCCCC-cccc--EEEecCCC----CCCCCcccCC--CCCC
Q 044578 352 -----------------VKLGTGR----TITGVSLYKGRRALLPN-KQYP--VVYMGSNS----SNSSSLCLEG--TLNP 401 (769)
Q Consensus 352 -----------------~~~~~g~----~~~~~~~~~~~~~~~~~-~~~~--l~~~~~~~----~~~~~~c~~~--~~~~ 401 (769)
...+++. ++.+.+++.... .+. ..++ +.|..... ......|... .+++
T Consensus 192 ~g~~vdv~ApG~~i~s~~~~g~g~~~~~~~~G~s~~~~~~--~p~~~~~~~~~~~~~~~~~g~~~~~~~~C~~~~~~~~~ 269 (441)
T 1y9z_A 192 YTDQVEISGPGEAILSTVTVGEGRLADITIGGQSYFSNGV--VPHNRLTPSGTSYAPAPINASATGALAECTVNGTSFSC 269 (441)
T ss_dssp CCTTEEEEEECSSEEEECSTTCEEEEEEEETTEECGGGCC--EECEEEEEETTEEEECCCCCEEEEEEEEEEEETTEEEC
T ss_pred CCCceEEEeccCCeeccccCCCcccceeeccccccccccc--CcccccccCCccccccccccccccchhccccccccccC
Confidence 1111221 122222221110 000 0000 01111000 0112347643 4567
Q ss_pred CCccceEEEEeCCCC-----chhhhhHHHhhcCceEEEEecCCCCCcc------ccccccccceEEEChhhhHHHHHHHh
Q 044578 402 TTVAGKIVICDRGIS-----PRVQKGQVVKDAGGIGVILANTAANGEE------LVADCHLLPAVAVGEIEGKEIKQYAS 470 (769)
Q Consensus 402 ~~~~g~ivl~~~g~~-----~~~~~~~~~~~~Ga~g~i~~n~~~~~~~------~~~~~~~~p~~~i~~~~~~~l~~~~~ 470 (769)
.+++|||++|+|+.+ .+.+|..+++++|+.|+|++|+...... .......+|.+.++..+|+.|++|+.
T Consensus 270 ~~~~gkivl~~rg~~~~~~~~~~~~~~~~~~aGa~gvii~~~~~~~g~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~ 349 (441)
T 1y9z_A 270 GNMANKICLVERVGNQGSSYPEINSTKACKTAGAKGIIVYSNSALPGLQNPFLVDANSDITVPSVSVDRATGLALKAKLG 349 (441)
T ss_dssp CCCTTEEEEEECCSCSSSSCTHHHHHHHHHHTTCSEEEEECCTTSCSCCCCEEECTTCCCCSCEEEECHHHHHHHHTTTT
T ss_pred CCccccEEEEeccccCcccccHHHHHHHHHhcCCeEEEEEeCCCccccccccccccccCccccEEEEeHHHHHHHHHHhc
Confidence 899999999999876 6788999999999999999988643211 11235679999999999999998764
Q ss_pred cCCCceEEEEecceeecccCCCeeccccCCCCCCCCCCcccCeeeeCCCceeecccCCCCCCCCCCCccccceeeecccc
Q 044578 471 TSPKATASLALLGTRVGIKPSPVVAAFSSRGPNFLTLEILKPDIVAPGVNILAAWSGETGPSSLPADHRRVKFNILSGTS 550 (769)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTS 550 (769)
+. .+ + ++... ..|..+||||
T Consensus 350 ~~----~t-----------------------------------~--------~~~~~-------------~~y~~~sGTS 369 (441)
T 1y9z_A 350 QS----TT-----------------------------------V--------SNQGN-------------QDYEYYNGTS 369 (441)
T ss_dssp SE----EE-----------------------------------E--------EEEEE-------------ESEEEECSHH
T ss_pred CC----cc-----------------------------------c--------ccccC-------------CCceeecccc
Confidence 21 10 0 01111 2799999999
Q ss_pred chhhhhHHHHHHHHhhCCCCCHHHHHHHHHhcccccCCCCCCCCCCCCCCCCCCCCCCCcccCccccCCCCceeccCccc
Q 044578 551 MSCPHVSGIAALLKARHPEWSPAAIKSALMTTAYVHDNTHNPLKDASSYEPSSPYDHGAGHINPVKALDPGLIYDINAQD 630 (769)
Q Consensus 551 mAaP~VAG~aALl~q~~p~lsp~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~G~G~vd~~~Al~~~lv~d~~~~d 630 (769)
||||||||++|||+|+||+|+|++||++||+||++++..+ .+.+||+|+||+.+|+ |
T Consensus 370 mAaP~VAG~aALl~~~~p~~sp~~ik~~L~~TA~~~~~~g------------~~~~~G~G~vn~~~A~-----------~ 426 (441)
T 1y9z_A 370 MATPHVSGVATLVWSYHPECSASQVRAALNATADDLSVAG------------RDNQTGYGMINAVAAK-----------A 426 (441)
T ss_dssp HHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHSBCCSSSS------------CBTTTBTCBCCHHHHH-----------H
T ss_pred cCCcccchHHHHHHHHCCCCCHHHHHHHHHhhchhhccCC------------CcccccccccCHHHHH-----------H
Confidence 9999999999999999999999999999999999876433 2358999999999996 4
Q ss_pred hhhhcccCCCC
Q 044578 631 YFDFLCSQKLT 641 (769)
Q Consensus 631 ~~~~~~~~~~~ 641 (769)
|+.|||++++.
T Consensus 427 ~~~~lc~~~~~ 437 (441)
T 1y9z_A 427 YLDESCTGPTD 437 (441)
T ss_dssp HHHHCTTCC--
T ss_pred HHHhhhcCCCC
Confidence 99999998764
No 10
>1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1
Probab=100.00 E-value=2e-52 Score=440.75 Aligned_cols=268 Identities=29% Similarity=0.386 Sum_probs=219.5
Q ss_pred cccCcCCCCCCCccccCCCCCCcEEEEeccccCCCCCCcccCCCCCCCCccccccccCCCcccccCCceeEeeEecccch
Q 044578 118 LFLGLEPADSTSIWSQKVADYDVIVGVLDTGIWPESASFNDTGMTPVPAHWKGACETGRGFQKHHCNRKIVGARVFYRGY 197 (769)
Q Consensus 118 ~~~g~~~~~~~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~~~~~~~n~ki~g~~~~~~~~ 197 (769)
.+|++..++.+.+|+.+..|+||+|||||||||++||+|.++ ++..++|.++
T Consensus 11 ~~w~l~~i~~~~aw~~~~g~~gv~VaViDtGvd~~hp~l~~~---------------------------~~~~~~~~~~- 62 (280)
T 1dbi_A 11 YQYGPQNTYTDYAWDVTKGSSGQEIAVIDTGVDYTHPDLDGK---------------------------VIKGYDFVDN- 62 (280)
T ss_dssp HCCTTGGGTHHHHTTTCCCCTTCEEEEEESCCCTTSTTTTTT---------------------------EEEEEETTTT-
T ss_pred CCCChhhcCcHHHHhhcCCCCCCEEEEEeCCcCCCChhhccC---------------------------cccceeccCC-
Confidence 468888887788999998888999999999999999999753 3444555432
Q ss_pred hhccCcccccCCCCCCCCCCCChhhhhHhhccCCCCCCCccccccccceeeccCceEEEEEEeeCCC-CCHHHHHHHHHH
Q 044578 198 EAATGKINEQNEYKSPRDQDGHGTHTAATVAGSPVHGANLLGYAYGTARGMSTGARIAVYKVCWSGG-CFSSDILSAVDR 276 (769)
Q Consensus 198 ~~~~~~~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~sdi~~ai~~ 276 (769)
..++.|..||||||||||+|...+..+ +.||||+|+|+.+|+++..+ +..+++++||+|
T Consensus 63 ------------~~~~~d~~gHGT~vAgiia~~~~~~~g--------~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~ 122 (280)
T 1dbi_A 63 ------------DYDPMDLNNHGTHVAGIAAAETNNATG--------IAGMAPNTRILAVRALDRNGSGTLSDIADAIIY 122 (280)
T ss_dssp ------------BSCCCCSSSHHHHHHHHHHCCCSSSSS--------CCCSSSSCEEEEEECCCTTSCCCHHHHHHHHHH
T ss_pred ------------CCCCCCCCCcHHHHHHHHhCcCCCCCc--------ceEeCCCCEEEEEEEECCCCCcCHHHHHHHHHH
Confidence 123678899999999999998654322 38999999999999998877 788899999999
Q ss_pred HHhCCCcEEEeccCCCCCCCccchHHHHHHHHHhcCcEEEEecCCCCCCCCcccCCCCceEEecCCCCCCceeeEEEeCC
Q 044578 277 AVADGVNVLSISLGGGVSSYHRDSLSIATFGAMEMGVFVSCSAGNGGPDPVSLTNVSPWITTVGASTLDRDFPATVKLGT 356 (769)
Q Consensus 277 a~~~g~dVIn~SlG~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~~~ 356 (769)
|++++++|||||||... ..+.+..++.++.++|+++|+||||+|.....+++..+++|+|||.+.
T Consensus 123 a~~~g~~Vin~S~G~~~---~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~------------ 187 (280)
T 1dbi_A 123 AADSGAEVINLSLGCDC---HTTTLENAVNYAWNKGSVVVAAAGNNGSSTTFEPASYENVIAVGAVDQ------------ 187 (280)
T ss_dssp HHHTTCSEEEECCSSCC---CCHHHHHHHHHHHHTTCEEEEECCBC---------CCTTSEEEEEECT------------
T ss_pred HHHCCCCEEEeCCCCCC---CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCCeEEEEeeCC------------
Confidence 99999999999999853 235677777789999999999999999877778888899999997321
Q ss_pred CcEEEEEEeccCCcCCCCCccccEEEecCCCCCCCCcccCCCCCCCCccceEEEEeCCCCchhhhhHHHhhcCceEEEEe
Q 044578 357 GRTITGVSLYKGRRALLPNKQYPVVYMGSNSSNSSSLCLEGTLNPTTVAGKIVICDRGISPRVQKGQVVKDAGGIGVILA 436 (769)
Q Consensus 357 g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~~~~~~~~Ga~g~i~~ 436 (769)
T Consensus 188 -------------------------------------------------------------------------------- 187 (280)
T 1dbi_A 188 -------------------------------------------------------------------------------- 187 (280)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCCccccccccccceEEEChhhhHHHHHHHhcCCCceEEEEecceeecccCCCeeccccCCCCCCCCCCcccCeeee
Q 044578 437 NTAANGEELVADCHLLPAVAVGEIEGKEIKQYASTSPKATASLALLGTRVGIKPSPVVAAFSSRGPNFLTLEILKPDIVA 516 (769)
Q Consensus 437 n~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~A 516 (769)
.+.++.||++||.. ||+|
T Consensus 188 ------------------------------------------------------~~~~~~~S~~G~~~--------dv~A 205 (280)
T 1dbi_A 188 ------------------------------------------------------YDRLASFSNYGTWV--------DVVA 205 (280)
T ss_dssp ------------------------------------------------------TSCBCTTBCCSTTC--------CEEE
T ss_pred ------------------------------------------------------CCCcCCCCCCCCCc--------eEEE
Confidence 12678899999865 9999
Q ss_pred CCCceeecccCCCCCCCCCCCccccceeeeccccchhhhhHHHHHHHHhhCCCCCHHHHHHHHHhcccccCCCCCCCCCC
Q 044578 517 PGVNILAAWSGETGPSSLPADHRRVKFNILSGTSMSCPHVSGIAALLKARHPEWSPAAIKSALMTTAYVHDNTHNPLKDA 596 (769)
Q Consensus 517 PG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lsp~~ik~~L~~TA~~~~~~g~~~~~~ 596 (769)
||++|+++++.+ .|..++|||||||||||++|||++ |.+++.+||++|++||+++...
T Consensus 206 pG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~--p~~t~~~v~~~L~~ta~~~~~~------- 263 (280)
T 1dbi_A 206 PGVDIVSTITGN-------------RYAYMSGTSMASPHVAGLAALLAS--QGRNNIEIRQAIEQTADKISGT------- 263 (280)
T ss_dssp ECSSEEEEETTT-------------EEEEECSHHHHHHHHHHHHHHHHH--TTCCHHHHHHHHHHTSBCCTTB-------
T ss_pred ecCCeEeecCCC-------------CEEEccCHHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHhCccCCCC-------
Confidence 999999998764 799999999999999999999987 8999999999999999987421
Q ss_pred CCCCCCCCCCCCCcccCccccCC
Q 044578 597 SSYEPSSPYDHGAGHINPVKALD 619 (769)
Q Consensus 597 ~~~~~~~~~~~G~G~vd~~~Al~ 619 (769)
...||+|+||+.+|++
T Consensus 264 -------~~~~G~G~vn~~~A~~ 279 (280)
T 1dbi_A 264 -------GTYFKYGRINSYNAVT 279 (280)
T ss_dssp -------TTTBSSEECCHHHHHT
T ss_pred -------CCcccCCEECHHHHhc
Confidence 1379999999999986
No 11
>1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A*
Probab=100.00 E-value=2.7e-52 Score=437.02 Aligned_cols=265 Identities=34% Similarity=0.494 Sum_probs=224.4
Q ss_pred cccCcCCCCCCCccccCCCCCCcEEEEeccccCCCCCCcccCCCCCCCCccccccccCCCcccccCCceeEeeEecccch
Q 044578 118 LFLGLEPADSTSIWSQKVADYDVIVGVLDTGIWPESASFNDTGMTPVPAHWKGACETGRGFQKHHCNRKIVGARVFYRGY 197 (769)
Q Consensus 118 ~~~g~~~~~~~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~~~~~~~n~ki~g~~~~~~~~ 197 (769)
..|+++.++.+.+|..+++|+||+|+|||||| .+||+|+ +...++|..+
T Consensus 4 ~~W~l~~i~~~~a~~~g~~G~gv~VaViDtGi-~~h~~l~-----------------------------~~~~~~~~~~- 52 (269)
T 1gci_A 4 VPWGISRVQAPAAHNRGLTGSGVKVAVLDTGI-STHPDLN-----------------------------IRGGASFVPG- 52 (269)
T ss_dssp CCHHHHHTTHHHHHHTTCSCTTCEEEEEESCC-CCCTTCC-----------------------------EEEEEECSTT-
T ss_pred CCcChhhcCcHHHHhcCCCCCCCEEEEECCCC-CCCHhhc-----------------------------ccCCcccCCC-
Confidence 35888887778899999999999999999999 8999994 1223334322
Q ss_pred hhccCcccccCCCCCCCCCCCChhhhhHhhccCCCCCCCccccccccceeeccCceEEEEEEeeCCC-CCHHHHHHHHHH
Q 044578 198 EAATGKINEQNEYKSPRDQDGHGTHTAATVAGSPVHGANLLGYAYGTARGMSTGARIAVYKVCWSGG-CFSSDILSAVDR 276 (769)
Q Consensus 198 ~~~~~~~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~sdi~~ai~~ 276 (769)
...+.|..||||||||||+|..+ + .| +.||||+|+|+.+|+++..+ +..+++++||+|
T Consensus 53 ------------~~~~~d~~gHGT~vAgiia~~~~-~---~~-----~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~ 111 (269)
T 1gci_A 53 ------------EPSTQDGNGHGTHVAGTIAALNN-S---IG-----VLGVAPSAELYAVKVLGASGSGSVSSIAQGLEW 111 (269)
T ss_dssp ------------CCSCSCSSSHHHHHHHHHHCCCS-S---SB-----CCCSSTTCEEEEEECBCTTSCBCHHHHHHHHHH
T ss_pred ------------CCCCCCCCCChHHHHHHHhcCcC-C---CC-----cEEeCCCCEEEEEEeECCCCCcCHHHHHHHHHH
Confidence 11256889999999999999732 1 12 38999999999999998776 778899999999
Q ss_pred HHhCCCcEEEeccCCCCCCCccchHHHHHHHHHhcCcEEEEecCCCCCCCCcccCCCCceEEecCCCCCCceeeEEEeCC
Q 044578 277 AVADGVNVLSISLGGGVSSYHRDSLSIATFGAMEMGVFVSCSAGNGGPDPVSLTNVSPWITTVGASTLDRDFPATVKLGT 356 (769)
Q Consensus 277 a~~~g~dVIn~SlG~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~~~ 356 (769)
+++++++|||||||.... ...+..++.++.++|+++|+||||+|.....++...+++|+|||.+.
T Consensus 112 a~~~~~~Vin~S~G~~~~---~~~~~~ai~~a~~~gv~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~------------ 176 (269)
T 1gci_A 112 AGNNGMHVANLSLGSPSP---SATLEQAVNSATSRGVLVVAASGNSGAGSISYPARYANAMAVGATDQ------------ 176 (269)
T ss_dssp HHHTTCSEEEECCCBSSC---CHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECT------------
T ss_pred HHHCCCeEEEeCCCCCCC---CHHHHHHHHHHHHCCCEEEEecCCCCCCCCcCCccCCCeEEEEeecC------------
Confidence 999999999999998542 35677777788999999999999999887788888999999997321
Q ss_pred CcEEEEEEeccCCcCCCCCccccEEEecCCCCCCCCcccCCCCCCCCccceEEEEeCCCCchhhhhHHHhhcCceEEEEe
Q 044578 357 GRTITGVSLYKGRRALLPNKQYPVVYMGSNSSNSSSLCLEGTLNPTTVAGKIVICDRGISPRVQKGQVVKDAGGIGVILA 436 (769)
Q Consensus 357 g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~~~~~~~~Ga~g~i~~ 436 (769)
T Consensus 177 -------------------------------------------------------------------------------- 176 (269)
T 1gci_A 177 -------------------------------------------------------------------------------- 176 (269)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCCccccccccccceEEEChhhhHHHHHHHhcCCCceEEEEecceeecccCCCeeccccCCCCCCCCCCcccCeeee
Q 044578 437 NTAANGEELVADCHLLPAVAVGEIEGKEIKQYASTSPKATASLALLGTRVGIKPSPVVAAFSSRGPNFLTLEILKPDIVA 516 (769)
Q Consensus 437 n~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~A 516 (769)
.+.++.||++||.+ ||+|
T Consensus 177 ------------------------------------------------------~~~~~~~S~~G~~~--------di~A 194 (269)
T 1gci_A 177 ------------------------------------------------------NNNRASFSQYGAGL--------DIVA 194 (269)
T ss_dssp ------------------------------------------------------TSCBCTTCCCSTTE--------EEEE
T ss_pred ------------------------------------------------------CCCCCCCCCCCCCc--------ceEe
Confidence 12678899999865 9999
Q ss_pred CCCceeecccCCCCCCCCCCCccccceeeeccccchhhhhHHHHHHHHhhCCCCCHHHHHHHHHhcccccCCCCCCCCCC
Q 044578 517 PGVNILAAWSGETGPSSLPADHRRVKFNILSGTSMSCPHVSGIAALLKARHPEWSPAAIKSALMTTAYVHDNTHNPLKDA 596 (769)
Q Consensus 517 PG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lsp~~ik~~L~~TA~~~~~~g~~~~~~ 596 (769)
||++|+++++.. .|..++|||||||||||++|||+|++|+|++.|||++|++||+++.
T Consensus 195 PG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~~t~~~v~~~L~~tA~~~g--------- 252 (269)
T 1gci_A 195 PGVNVQSTYPGS-------------TYASLNGTSMATPHVAGAAALVKQKNPSWSNVQIRNHLKNTATSLG--------- 252 (269)
T ss_dssp ECSSEEEEETTT-------------EEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTSBCCS---------
T ss_pred cCCCeEeecCCC-------------CEEEcCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCC---------
Confidence 999999998764 7999999999999999999999999999999999999999999863
Q ss_pred CCCCCCCCCCCCCcccCccccCC
Q 044578 597 SSYEPSSPYDHGAGHINPVKALD 619 (769)
Q Consensus 597 ~~~~~~~~~~~G~G~vd~~~Al~ 619 (769)
++..||+|+||+.+|++
T Consensus 253 ------~~~~~G~G~vn~~~A~~ 269 (269)
T 1gci_A 253 ------STNLYGSGLVNAEAATR 269 (269)
T ss_dssp ------CHHHHTTCBCCHHHHTC
T ss_pred ------CCCCcccCccCHHHHcC
Confidence 23489999999999985
No 12
>1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ...
Probab=100.00 E-value=2.1e-52 Score=439.52 Aligned_cols=266 Identities=32% Similarity=0.482 Sum_probs=222.5
Q ss_pred cccCcCCCCCCCccccCCCCCCcEEEEeccccCCCCCCcccCCCCCCCCccccccccCCCcccccCCceeEeeEecccch
Q 044578 118 LFLGLEPADSTSIWSQKVADYDVIVGVLDTGIWPESASFNDTGMTPVPAHWKGACETGRGFQKHHCNRKIVGARVFYRGY 197 (769)
Q Consensus 118 ~~~g~~~~~~~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~~~~~~~n~ki~g~~~~~~~~ 197 (769)
..|+++.++.+.+|+.+++|+||+|+|||||||++||+|+ +...++|..+.
T Consensus 4 ~~w~l~~i~~~~~~~~g~~G~gv~VaViDtGid~~h~~l~-----------------------------~~~g~~~~~~~ 54 (274)
T 1r0r_E 4 VPYGIPLIKADKVQAQGFKGANVKVAVLDTGIQASHPDLN-----------------------------VVGGASFVAGE 54 (274)
T ss_dssp CCTHHHHTTHHHHHHHTCSCTTCEEEEEESCCCTTCTTCC-----------------------------EEEEEECSTTC
T ss_pred CCCchhhcCCHHHHhcCCCCCCCEEEEEcCCCCCCCHhHc-----------------------------CCCCccccCCC
Confidence 3588887777889999999999999999999999999994 12233343221
Q ss_pred hhccCcccccCCCCCCCCCCCChhhhhHhhccCCCCCCCccccccccceeeccCceEEEEEEeeCCC-CCHHHHHHHHHH
Q 044578 198 EAATGKINEQNEYKSPRDQDGHGTHTAATVAGSPVHGANLLGYAYGTARGMSTGARIAVYKVCWSGG-CFSSDILSAVDR 276 (769)
Q Consensus 198 ~~~~~~~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~sdi~~ai~~ 276 (769)
..+.|..||||||||||+|..+. .| +.||||+|+|+.+|+++..+ +..+++++||+|
T Consensus 55 -------------~~~~d~~gHGT~vAgiia~~~~~----~g-----~~GvAp~a~l~~~~v~~~~g~~~~~~i~~ai~~ 112 (274)
T 1r0r_E 55 -------------AYNTDGNGHGTHVAGTVAALDNT----TG-----VLGVAPSVSLYAVKVLNSSGSGSYSGIVSGIEW 112 (274)
T ss_dssp -------------CTTCCSSSHHHHHHHHHHCCSSS----SB-----CCCSSTTSEEEEEECSCTTSEECHHHHHHHHHH
T ss_pred -------------CCCCCCCCCHHHHHHHHHccCCC----Cc-----eEEECCCCEEEEEEEECCCCCccHHHHHHHHHH
Confidence 12567899999999999997321 12 38999999999999998777 778899999999
Q ss_pred HHhCCCcEEEeccCCCCCCCccchHHHHHHHHHhcCcEEEEecCCCCCCC----CcccCCCCceEEecCCCCCCceeeEE
Q 044578 277 AVADGVNVLSISLGGGVSSYHRDSLSIATFGAMEMGVFVSCSAGNGGPDP----VSLTNVSPWITTVGASTLDRDFPATV 352 (769)
Q Consensus 277 a~~~g~dVIn~SlG~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~G~~~----~~~~~~~p~vitVgA~~~~~~~~~~~ 352 (769)
+++++++|||||||.... .+.+..++.++.++|+++|+||||+|... ..++...|++|+|||.+
T Consensus 113 a~~~~~~Vin~S~G~~~~---~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~--------- 180 (274)
T 1r0r_E 113 ATTNGMDVINMSLGGASG---STAMKQAVDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVGAVD--------- 180 (274)
T ss_dssp HHHTTCSEEEECEEBSSC---CHHHHHHHHHHHHTTCEEEEECCSCCCCTTCCCCCBTTTSTTSEEEEEEC---------
T ss_pred HHHcCCCEEEeCCCCCCC---cHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCccccCCCCCCcEEEEEEec---------
Confidence 999999999999998542 35677777888999999999999999763 34567788999999732
Q ss_pred EeCCCcEEEEEEeccCCcCCCCCccccEEEecCCCCCCCCcccCCCCCCCCccceEEEEeCCCCchhhhhHHHhhcCceE
Q 044578 353 KLGTGRTITGVSLYKGRRALLPNKQYPVVYMGSNSSNSSSLCLEGTLNPTTVAGKIVICDRGISPRVQKGQVVKDAGGIG 432 (769)
Q Consensus 353 ~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~~~~~~~~Ga~g 432 (769)
T Consensus 181 -------------------------------------------------------------------------------- 180 (274)
T 1r0r_E 181 -------------------------------------------------------------------------------- 180 (274)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEecCCCCCccccccccccceEEEChhhhHHHHHHHhcCCCceEEEEecceeecccCCCeeccccCCCCCCCCCCcccC
Q 044578 433 VILANTAANGEELVADCHLLPAVAVGEIEGKEIKQYASTSPKATASLALLGTRVGIKPSPVVAAFSSRGPNFLTLEILKP 512 (769)
Q Consensus 433 ~i~~n~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKP 512 (769)
..+.++.||++||.+
T Consensus 181 ---------------------------------------------------------~~~~~~~~S~~G~~~-------- 195 (274)
T 1r0r_E 181 ---------------------------------------------------------SNSNRASFSSVGAEL-------- 195 (274)
T ss_dssp ---------------------------------------------------------TTSCBCTTCCCSTTE--------
T ss_pred ---------------------------------------------------------CCCCcCccCCCCCCc--------
Confidence 112678899999854
Q ss_pred eeeeCCCceeecccCCCCCCCCCCCccccceeeeccccchhhhhHHHHHHHHhhCCCCCHHHHHHHHHhcccccCCCCCC
Q 044578 513 DIVAPGVNILAAWSGETGPSSLPADHRRVKFNILSGTSMSCPHVSGIAALLKARHPEWSPAAIKSALMTTAYVHDNTHNP 592 (769)
Q Consensus 513 DI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lsp~~ik~~L~~TA~~~~~~g~~ 592 (769)
||+|||++|+++++.+ .|..++|||||||||||++|||+|++|+|++.+||++|++||+++.
T Consensus 196 di~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g----- 257 (274)
T 1r0r_E 196 EVMAPGAGVYSTYPTN-------------TYATLNGTSMASPHVAGAAALILSKHPNLSASQVRNRLSSTATYLG----- 257 (274)
T ss_dssp EEEEECSSEEEEETTT-------------EEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCCS-----
T ss_pred eEEeCCCCeEeecCCC-------------CEEEeccHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcccC-----
Confidence 9999999999998764 7999999999999999999999999999999999999999999763
Q ss_pred CCCCCCCCCCCCCCCCCcccCccccCC
Q 044578 593 LKDASSYEPSSPYDHGAGHINPVKALD 619 (769)
Q Consensus 593 ~~~~~~~~~~~~~~~G~G~vd~~~Al~ 619 (769)
++..||+|+||+.+|++
T Consensus 258 ----------~~~~~G~G~~~~~~A~~ 274 (274)
T 1r0r_E 258 ----------SSFYYGKGLINVEAAAQ 274 (274)
T ss_dssp ----------CHHHHTTCBCCHHHHTC
T ss_pred ----------CCCCcccCccCHHHHhC
Confidence 23589999999999985
No 13
>1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ...
Probab=100.00 E-value=5.3e-52 Score=437.81 Aligned_cols=268 Identities=32% Similarity=0.485 Sum_probs=223.5
Q ss_pred cccCcCCCCCCCccccCCCCCCcEEEEeccccCCCCCCcccCCCCCCCCccccccccCCCcccccCCceeEeeEecccch
Q 044578 118 LFLGLEPADSTSIWSQKVADYDVIVGVLDTGIWPESASFNDTGMTPVPAHWKGACETGRGFQKHHCNRKIVGARVFYRGY 197 (769)
Q Consensus 118 ~~~g~~~~~~~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~~~~~~~n~ki~g~~~~~~~~ 197 (769)
..|+++.++.+.+|..+++|+||+|||||||||++||+|+. ...++|..+.
T Consensus 4 ~~w~l~~i~~~~~~~~g~~G~gv~VaViDtGid~~h~~l~~-----------------------------~~g~~~~~~~ 54 (281)
T 1to2_E 4 VPYGVSQIKAPALHSQGYTGSNVKVAVIDSGIDSSHPDLKV-----------------------------AGGASMVPSE 54 (281)
T ss_dssp CCHHHHHTTHHHHHHHTCSCTTCEEEEEESCCCTTCTTCCE-----------------------------EEEEECCTTC
T ss_pred CCcchhhcChHHHHhcCCCCCCCEEEEEcCCCCCCCHHHcC-----------------------------cCCccccCCC
Confidence 35888887778899999999999999999999999999942 2223332210
Q ss_pred hhccCcccccCCCCCCCCCCCChhhhhHhhccCCCCCCCccccccccceeeccCceEEEEEEeeCCC-CCHHHHHHHHHH
Q 044578 198 EAATGKINEQNEYKSPRDQDGHGTHTAATVAGSPVHGANLLGYAYGTARGMSTGARIAVYKVCWSGG-CFSSDILSAVDR 276 (769)
Q Consensus 198 ~~~~~~~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~sdi~~ai~~ 276 (769)
.....|..||||||||||+|..+ + .| +.||||+|+|+.+|+++..+ +..+++++||+|
T Consensus 55 ------------~~~~~d~~gHGT~vAgiia~~~~-~---~g-----~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~ 113 (281)
T 1to2_E 55 ------------TNPFQDNNSHGTHVAGTVAALNN-S---IG-----VLGVAPSASLYAVKVLGADGSGQYSWIINGIEW 113 (281)
T ss_dssp ------------CCTTCCSSSHHHHHHHHHHCCSS-S---SS-----BCCSSTTSEEEEEECSCTTSEECHHHHHHHHHH
T ss_pred ------------CCCCCCCCCcHHHHHHHHhccCC-C---Cc-----ceeeCCCCEEEEEEEeCCCCCccHHHHHHHHHH
Confidence 11236789999999999999732 1 12 38999999999999998776 778899999999
Q ss_pred HHhCCCcEEEeccCCCCCCCccchHHHHHHHHHhcCcEEEEecCCCCCCC----CcccCCCCceEEecCCCCCCceeeEE
Q 044578 277 AVADGVNVLSISLGGGVSSYHRDSLSIATFGAMEMGVFVSCSAGNGGPDP----VSLTNVSPWITTVGASTLDRDFPATV 352 (769)
Q Consensus 277 a~~~g~dVIn~SlG~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~G~~~----~~~~~~~p~vitVgA~~~~~~~~~~~ 352 (769)
+++++++|||||||.... ...+..++.++.++|++||+||||+|... ..++...|++|+|||.+
T Consensus 114 a~~~~~~Vin~S~G~~~~---~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~--------- 181 (281)
T 1to2_E 114 AIANNMDVINMSLGGPSG---SAALKAAVDKAVASGVVVVAAAGNEGTSGSSSTVGYPGKYPSVIAVGAVD--------- 181 (281)
T ss_dssp HHHTTCSEEEECEEBSCC---CHHHHHHHHHHHHTTCEEEEECCSCCCCTTSCCCCBTTTSTTSEEEEEEC---------
T ss_pred HHHCCCcEEEECCcCCCC---CHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCcCCCCEEEEEEec---------
Confidence 999999999999998542 35677778888999999999999999763 35567788999999732
Q ss_pred EeCCCcEEEEEEeccCCcCCCCCccccEEEecCCCCCCCCcccCCCCCCCCccceEEEEeCCCCchhhhhHHHhhcCceE
Q 044578 353 KLGTGRTITGVSLYKGRRALLPNKQYPVVYMGSNSSNSSSLCLEGTLNPTTVAGKIVICDRGISPRVQKGQVVKDAGGIG 432 (769)
Q Consensus 353 ~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~~~~~~~~Ga~g 432 (769)
T Consensus 182 -------------------------------------------------------------------------------- 181 (281)
T 1to2_E 182 -------------------------------------------------------------------------------- 181 (281)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEecCCCCCccccccccccceEEEChhhhHHHHHHHhcCCCceEEEEecceeecccCCCeeccccCCCCCCCCCCcccC
Q 044578 433 VILANTAANGEELVADCHLLPAVAVGEIEGKEIKQYASTSPKATASLALLGTRVGIKPSPVVAAFSSRGPNFLTLEILKP 512 (769)
Q Consensus 433 ~i~~n~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKP 512 (769)
..+.++.||++||.+
T Consensus 182 ---------------------------------------------------------~~~~~~~fS~~G~~~-------- 196 (281)
T 1to2_E 182 ---------------------------------------------------------SSNQRASFSSVGPEL-------- 196 (281)
T ss_dssp ---------------------------------------------------------TTSCBCTTCCCSTTC--------
T ss_pred ---------------------------------------------------------CCCCcCCcCCCCCCc--------
Confidence 112678999999865
Q ss_pred eeeeCCCceeecccCCCCCCCCCCCccccceeeeccccchhhhhHHHHHHHHhhCCCCCHHHHHHHHHhcccccCCCCCC
Q 044578 513 DIVAPGVNILAAWSGETGPSSLPADHRRVKFNILSGTSMSCPHVSGIAALLKARHPEWSPAAIKSALMTTAYVHDNTHNP 592 (769)
Q Consensus 513 DI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lsp~~ik~~L~~TA~~~~~~g~~ 592 (769)
||+|||++|+++++.+ .|..++|||||||+|||++|||+|++|+|++.+||++|++||+++.
T Consensus 197 di~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g----- 258 (281)
T 1to2_E 197 DVMAPGVSIQSTLPGN-------------KYGAYNGTSMASPHVAGAAALILSKHPNWTNTQVRSSLENTTTKLG----- 258 (281)
T ss_dssp CEEEECSSEEEEETTT-------------EEEEECBHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHTTCBCCS-----
T ss_pred eEEecCCCeEeecCCC-------------CEEecCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhCcccC-----
Confidence 9999999999998764 7999999999999999999999999999999999999999999863
Q ss_pred CCCCCCCCCCCCCCCCCcccCccccCCC
Q 044578 593 LKDASSYEPSSPYDHGAGHINPVKALDP 620 (769)
Q Consensus 593 ~~~~~~~~~~~~~~~G~G~vd~~~Al~~ 620 (769)
+++.||||+||+.+|+++
T Consensus 259 ----------~~~~~G~G~v~~~~a~~~ 276 (281)
T 1to2_E 259 ----------DSFYYGKGLINVQAAAQH 276 (281)
T ss_dssp ----------CHHHHTTCBCCHHHHTSS
T ss_pred ----------CCCCcccceecHHHHhhh
Confidence 235899999999999985
No 14
>1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E
Probab=100.00 E-value=1.2e-51 Score=435.00 Aligned_cols=267 Identities=27% Similarity=0.395 Sum_probs=225.5
Q ss_pred cccCcCCCCCCCccccCCCCCCcEEEEeccccCCCCCCcccCCCCCCCCccccccccCCCcccccCCceeEeeEecccch
Q 044578 118 LFLGLEPADSTSIWSQKVADYDVIVGVLDTGIWPESASFNDTGMTPVPAHWKGACETGRGFQKHHCNRKIVGARVFYRGY 197 (769)
Q Consensus 118 ~~~g~~~~~~~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~~~~~~~n~ki~g~~~~~~~~ 197 (769)
..|+++.++.+.+|+.. +|+||+|+|||||||++||+|.++ ++..++|.++
T Consensus 11 ~~w~l~~i~~~~aw~~~-~G~gv~VaViDtGvd~~h~~l~~~---------------------------~~~~~~~~~~- 61 (279)
T 1thm_A 11 RQYGPQKIQAPQAWDIA-EGSGAKIAIVDTGVQSNHPDLAGK---------------------------VVGGWDFVDN- 61 (279)
T ss_dssp HCCHHHHTTHHHHHTTC-CCTTCEEEEEESCCCTTCTTTTTT---------------------------EEEEEETTTT-
T ss_pred cccChhhCChHHHHhcC-CCCCCEEEEEccCCCCCCcchhcC---------------------------ccccccccCC-
Confidence 45788777778899987 699999999999999999999753 4444555432
Q ss_pred hhccCcccccCCCCCCCCCCCChhhhhHhhccCCCCCCCccccccccceeeccCceEEEEEEeeCCC-CCHHHHHHHHHH
Q 044578 198 EAATGKINEQNEYKSPRDQDGHGTHTAATVAGSPVHGANLLGYAYGTARGMSTGARIAVYKVCWSGG-CFSSDILSAVDR 276 (769)
Q Consensus 198 ~~~~~~~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~sdi~~ai~~ 276 (769)
...+.|..||||||||||+|...++.+ +.||||+|+|+.+|+++..+ ++.+++++||+|
T Consensus 62 ------------~~~~~d~~gHGT~vAgiia~~~~n~~g--------~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~ 121 (279)
T 1thm_A 62 ------------DSTPQNGNGHGTHCAGIAAAVTNNSTG--------IAGTAPKASILAVRVLDNSGSGTWTAVANGITY 121 (279)
T ss_dssp ------------BSCCCCSSSHHHHHHHHHHCCCSSSSS--------CCCSSTTCEEEEEECSCTTSCCCHHHHHHHHHH
T ss_pred ------------CCCCCCCCCcHHHHHHHHhCccCCCCc--------cEEeCCCCEEEEEEeeCCCCCccHHHHHHHHHH
Confidence 123678899999999999998654422 38999999999999998776 778899999999
Q ss_pred HHhCCCcEEEeccCCCCCCCccchHHHHHHHHHhcCcEEEEecCCCCCCCCcccCCCCceEEecCCCCCCceeeEEEeCC
Q 044578 277 AVADGVNVLSISLGGGVSSYHRDSLSIATFGAMEMGVFVSCSAGNGGPDPVSLTNVSPWITTVGASTLDRDFPATVKLGT 356 (769)
Q Consensus 277 a~~~g~dVIn~SlG~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~~~ 356 (769)
|++++++|||||||.... .+.+..++.++.++|+++|+||||+|.....++...+++|+|||.+.
T Consensus 122 a~~~g~~Vin~S~G~~~~---~~~l~~ai~~a~~~gvlvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~------------ 186 (279)
T 1thm_A 122 AADQGAKVISLSLGGTVG---NSGLQQAVNYAWNKGSVVVAAAGNAGNTAPNYPAYYSNAIAVASTDQ------------ 186 (279)
T ss_dssp HHHTTCSEEEECCCBSSC---CHHHHHHHHHHHHTTCEEEEECCSSSSCCCCBTTTSTTEEEEEEECT------------
T ss_pred HHHCCCCEEEEecCCCCC---CHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCCCeEEEEEeCC------------
Confidence 999999999999998532 35677777889999999999999999887788888999999997321
Q ss_pred CcEEEEEEeccCCcCCCCCccccEEEecCCCCCCCCcccCCCCCCCCccceEEEEeCCCCchhhhhHHHhhcCceEEEEe
Q 044578 357 GRTITGVSLYKGRRALLPNKQYPVVYMGSNSSNSSSLCLEGTLNPTTVAGKIVICDRGISPRVQKGQVVKDAGGIGVILA 436 (769)
Q Consensus 357 g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~~~~~~~~Ga~g~i~~ 436 (769)
T Consensus 187 -------------------------------------------------------------------------------- 186 (279)
T 1thm_A 187 -------------------------------------------------------------------------------- 186 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCCccccccccccceEEEChhhhHHHHHHHhcCCCceEEEEecceeecccCCCeeccccCCCCCCCCCCcccCeeee
Q 044578 437 NTAANGEELVADCHLLPAVAVGEIEGKEIKQYASTSPKATASLALLGTRVGIKPSPVVAAFSSRGPNFLTLEILKPDIVA 516 (769)
Q Consensus 437 n~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~A 516 (769)
.+.++.||++||.+ ||+|
T Consensus 187 ------------------------------------------------------~~~~~~fS~~G~~~--------dv~A 204 (279)
T 1thm_A 187 ------------------------------------------------------NDNKSSFSTYGSWV--------DVAA 204 (279)
T ss_dssp ------------------------------------------------------TSCBCTTCCCCTTC--------CEEE
T ss_pred ------------------------------------------------------CCCcCCcCCCCCce--------EEEE
Confidence 12678899999865 9999
Q ss_pred CCCceeecccCCCCCCCCCCCccccceeeeccccchhhhhHHHHHHHHhhCCCCCHHHHHHHHHhcccccCCCCCCCCCC
Q 044578 517 PGVNILAAWSGETGPSSLPADHRRVKFNILSGTSMSCPHVSGIAALLKARHPEWSPAAIKSALMTTAYVHDNTHNPLKDA 596 (769)
Q Consensus 517 PG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lsp~~ik~~L~~TA~~~~~~g~~~~~~ 596 (769)
||++|+++++.. .|..++|||||||||||++||| ++|.+++++||++|++||+++...+
T Consensus 205 PG~~i~s~~~~~-------------~~~~~sGTS~AaP~VaG~aAll--~~p~~t~~~v~~~L~~ta~~~~~~~------ 263 (279)
T 1thm_A 205 PGSSIYSTYPTS-------------TYASLSGTSMATPHVAGVAGLL--ASQGRSASNIRAAIENTADKISGTG------ 263 (279)
T ss_dssp ECSSEEEEETTT-------------EEEEECSHHHHHHHHHHHHHHH--HTTTCCHHHHHHHHHHTCBCCTTBT------
T ss_pred cCCCeEEEeCCC-------------CEEEcccHHHHHHHHHHHHHHH--HCCCcCHHHHHHHHHHhCccCCCCC------
Confidence 999999998764 7999999999999999999999 5799999999999999999875321
Q ss_pred CCCCCCCCCCCCCcccCccccCC
Q 044578 597 SSYEPSSPYDHGAGHINPVKALD 619 (769)
Q Consensus 597 ~~~~~~~~~~~G~G~vd~~~Al~ 619 (769)
..||+|+||+.+|++
T Consensus 264 --------~~~G~G~vn~~~A~~ 278 (279)
T 1thm_A 264 --------TYWAKGRVNAYKAVQ 278 (279)
T ss_dssp --------TTBSSEECCHHHHHH
T ss_pred --------ccccCCeeCHHHHhc
Confidence 379999999999985
No 15
>2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A*
Probab=100.00 E-value=5.6e-52 Score=446.89 Aligned_cols=276 Identities=28% Similarity=0.407 Sum_probs=224.1
Q ss_pred CCcccCcCCCCCCCccccCCCCCCcEEEEeccccCCCCCCcccCCCCCCCCccccccccCCCcccccCCceeEeeEeccc
Q 044578 116 SPLFLGLEPADSTSIWSQKVADYDVIVGVLDTGIWPESASFNDTGMTPVPAHWKGACETGRGFQKHHCNRKIVGARVFYR 195 (769)
Q Consensus 116 s~~~~g~~~~~~~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~~~~~~~n~ki~g~~~~~~ 195 (769)
....|+++.++.+.+|+.+++|+||+|||||||||++||+|.++ +...++|..
T Consensus 19 ~~~~w~l~~i~~~~aw~~~~~G~gv~VaViDtGid~~Hp~l~~~---------------------------~~~~~~~~~ 71 (327)
T 2x8j_A 19 SEVPMGVEIVEAPAVWRASAKGAGQIIGVIDTGCQVDHPDLAER---------------------------IIGGVNLTT 71 (327)
T ss_dssp BSCCHHHHHTTHHHHHHHHGGGTTCEEEEEESCCCTTCTTTGGG---------------------------EEEEEECSS
T ss_pred cccCcchhhcChHHHHhcCCCCCCCEEEEEcCCCCCCChhHhhc---------------------------ccCCccccC
Confidence 44568888887788999999999999999999999999999752 445556655
Q ss_pred chhhccCcccccCCCCCCCCCCCChhhhhHhhccCCCCCCCccccccccceeeccCceEEEEEEeeCCC-CCHHHHHHHH
Q 044578 196 GYEAATGKINEQNEYKSPRDQDGHGTHTAATVAGSPVHGANLLGYAYGTARGMSTGARIAVYKVCWSGG-CFSSDILSAV 274 (769)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~sdi~~ai 274 (769)
++.. ......|..||||||||||+|..+ +. | +.||||+|+|+.+|+++..+ +..+++++||
T Consensus 72 ~~~~---------~~~~~~d~~gHGT~VAgiia~~~~-~~---g-----~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai 133 (327)
T 2x8j_A 72 DYGG---------DETNFSDNNGHGTHVAGTVAAAET-GS---G-----VVGVAPKADLFIIKALSGDGSGEMGWIAKAI 133 (327)
T ss_dssp GGGG---------CTTCCCCSSSHHHHHHHHHHCCCC-SS---B-----CCCSSTTCEEEEEECSCTTSEECHHHHHHHH
T ss_pred CCCC---------CCCCCCCCCCchHHHHHHHhccCC-CC---C-----cEeeCCCCEEEEEEeECCCCCcCHHHHHHHH
Confidence 4311 112356889999999999999842 11 2 38999999999999998877 7888999999
Q ss_pred HHHHh------CCCcEEEeccCCCCCCCccchHHHHHHHHHhcCcEEEEecCCCCCCC-----CcccCCCCceEEecCCC
Q 044578 275 DRAVA------DGVNVLSISLGGGVSSYHRDSLSIATFGAMEMGVFVSCSAGNGGPDP-----VSLTNVSPWITTVGAST 343 (769)
Q Consensus 275 ~~a~~------~g~dVIn~SlG~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~G~~~-----~~~~~~~p~vitVgA~~ 343 (769)
+||++ .+++|||||||.... ...+..++.++.++|++||+||||+|... ..+++..+++|+|||++
T Consensus 134 ~~a~~~~~~~~~~~~Vin~S~G~~~~---~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~~Pa~~~~vi~Vga~~ 210 (327)
T 2x8j_A 134 RYAVDWRGPKGEQMRIITMSLGGPTD---SEELHDAVKYAVSNNVSVVCAAGNEGDGREDTNEFAYPAAYNEVIAVGAVD 210 (327)
T ss_dssp HHHHHCCCTTSCCCSEEEECEEBSCC---CHHHHHHHHHHHHTTCEEEEECCCT---------TCBTTTSTTSEEEEEEC
T ss_pred HHHHhhcccccCCceEEEECCCcCCC---CHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCceeccccCCCEEEEEEEC
Confidence 99999 899999999998542 35677777788999999999999999752 35677788999999732
Q ss_pred CCCceeeEEEeCCCcEEEEEEeccCCcCCCCCccccEEEecCCCCCCCCcccCCCCCCCCccceEEEEeCCCCchhhhhH
Q 044578 344 LDRDFPATVKLGTGRTITGVSLYKGRRALLPNKQYPVVYMGSNSSNSSSLCLEGTLNPTTVAGKIVICDRGISPRVQKGQ 423 (769)
Q Consensus 344 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~~~ 423 (769)
.
T Consensus 211 ~------------------------------------------------------------------------------- 211 (327)
T 2x8j_A 211 F------------------------------------------------------------------------------- 211 (327)
T ss_dssp T-------------------------------------------------------------------------------
T ss_pred C-------------------------------------------------------------------------------
Confidence 1
Q ss_pred HHhhcCceEEEEecCCCCCccccccccccceEEEChhhhHHHHHHHhcCCCceEEEEecceeecccCCCeeccccCCCCC
Q 044578 424 VVKDAGGIGVILANTAANGEELVADCHLLPAVAVGEIEGKEIKQYASTSPKATASLALLGTRVGIKPSPVVAAFSSRGPN 503 (769)
Q Consensus 424 ~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fSS~GP~ 503 (769)
.+.++.||++||.
T Consensus 212 -------------------------------------------------------------------~~~~~~fS~~G~~ 224 (327)
T 2x8j_A 212 -------------------------------------------------------------------DLRLSDFTNTNEE 224 (327)
T ss_dssp -------------------------------------------------------------------TCCBSCC---CCC
T ss_pred -------------------------------------------------------------------CCCCCCccCCCCC
Confidence 1267899999985
Q ss_pred CCCCCcccCeeeeCCCceeecccCCCCCCCCCCCccccceeeeccccchhhhhHHHHHHHHhh-----CCCCCHHHHHHH
Q 044578 504 FLTLEILKPDIVAPGVNILAAWSGETGPSSLPADHRRVKFNILSGTSMSCPHVSGIAALLKAR-----HPEWSPAAIKSA 578 (769)
Q Consensus 504 ~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~-----~p~lsp~~ik~~ 578 (769)
|||+|||++|+++++.+ .|..++|||||||+|||++|||+|+ +|.|++.+||++
T Consensus 225 --------~di~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~VaG~aAll~~~~~~~~~p~ls~~~v~~~ 283 (327)
T 2x8j_A 225 --------IDIVAPGVGIKSTYLDS-------------GYAELSGTAMAAPHVAGALALIINLAEDAFKRSLSETEIYAQ 283 (327)
T ss_dssp --------CSEEEECSSEEEECSTT-------------CEEEEESGGGTHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHH
T ss_pred --------ceEecCcCceEeecCCC-------------CEEeecCHHHHHHHHHHHHHHHHHhhhhhcCCCCCHHHHHHH
Confidence 49999999999998764 7999999999999999999999999 999999999999
Q ss_pred HHhcccccCCCCCCCCCCCCCCCCCCCCCCCcccCccccCCC
Q 044578 579 LMTTAYVHDNTHNPLKDASSYEPSSPYDHGAGHINPVKALDP 620 (769)
Q Consensus 579 L~~TA~~~~~~g~~~~~~~~~~~~~~~~~G~G~vd~~~Al~~ 620 (769)
|++||+++. +++..+|+|+||+.+|++.
T Consensus 284 L~~tA~~~g--------------~~~~~~G~G~vd~~~A~~~ 311 (327)
T 2x8j_A 284 LVRRATPIG--------------FTAQAEGNGFLTLDLVERI 311 (327)
T ss_dssp HHTTEECCS--------------SCHHHHTTCEECTTHHHHH
T ss_pred HHHhCccCC--------------CCCCceeeeEECHHHHHHh
Confidence 999999763 1345899999999999973
No 16
>4h6x_A Thiazoline oxidase/subtilisin-like protease; hydrolase; 2.00A {Prochloron didemni} PDB: 4aks_A 4akt_A
Probab=100.00 E-value=3.7e-53 Score=461.98 Aligned_cols=306 Identities=22% Similarity=0.231 Sum_probs=198.8
Q ss_pred CCccccCCCCCCcEEEEeccccCCCCCCcccCCCCCCCCccccccccCCCcccccCCceeEeeEecccchhhccCccccc
Q 044578 128 TSIWSQKVADYDVIVGVLDTGIWPESASFNDTGMTPVPAHWKGACETGRGFQKHHCNRKIVGARVFYRGYEAATGKINEQ 207 (769)
Q Consensus 128 ~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~ 207 (769)
.++|+.+..|+||+|||||||||++||+|++....+....|+..++........ .+..+.. ....++..........
T Consensus 21 ~~~w~~~~g~~~V~VaViDtGiD~~Hpdf~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~ 97 (357)
T 4h6x_A 21 ADLHNQTLGDPQITIVIIDGDPDYTLSCFEGAEVSKVFPYWHEPAEPITPEDYA-AFQSIRD--QGLKGKEKEEALEAVI 97 (357)
T ss_dssp HHHHHHCSCCTTSEEEEEESCCCTTSGGGTTCEEEECCCTTSCCCCCCCHHHHH-HHHHHHH--HTCCSHHHHHHHHHHC
T ss_pred HHHHHhcCCCCCCEEEEEcCCCCCCChhHcCCCcccccccccccccccCccccc-ccccccC--cccccccccccccccc
Confidence 678999999999999999999999999999876666667776654432110000 0000000 0000000000000001
Q ss_pred CCCCCCCCCCCChhhhhHhhccCCCCCCCccccccccceeeccCceEEEEEEeeCCC------CCHHHHHHHHHHHHhCC
Q 044578 208 NEYKSPRDQDGHGTHTAATVAGSPVHGANLLGYAYGTARGMSTGARIAVYKVCWSGG------CFSSDILSAVDRAVADG 281 (769)
Q Consensus 208 ~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g------~~~sdi~~ai~~a~~~g 281 (769)
.+..++.|.+||||||||||||+.++ .+.||||+|+|+.+|++.... ....++++||+|++++|
T Consensus 98 ~~~~~~~D~~gHGThVAGiiag~~~~----------g~~GvAp~a~l~~~k~~~~~~~~~~~~~~~~~~~~ai~~a~~~g 167 (357)
T 4h6x_A 98 PDTKDRIVLNDHACHVTSTIVGQEHS----------PVFGIAPNCRVINMPQDAVIRGNYDDVMSPLNLARAIDLALELG 167 (357)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHCCTTS----------SCCCSCTTSEEEEEECTTC----------CHHHHHHHHHHHHTT
T ss_pred CCCCCCcCCCCcHHHHHHHHhccCCC----------CceEeeccceEEeeeecccCCCCccccccHHHHHHHHHHHHHcC
Confidence 11223457789999999999998532 148999999999999975421 34557889999999999
Q ss_pred CcEEEeccCCCC-CCCccchHHHHHHHHHhcCcEEEEecCCCCCCCCcccCCCCceEEecCCCCCCceeeEEEeCCCcEE
Q 044578 282 VNVLSISLGGGV-SSYHRDSLSIATFGAMEMGVFVSCSAGNGGPDPVSLTNVSPWITTVGASTLDRDFPATVKLGTGRTI 360 (769)
Q Consensus 282 ~dVIn~SlG~~~-~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~~~g~~~ 360 (769)
++|||||||... .....+.+..++.++.++|+++|+||||+|.....+++..|++|+|||++
T Consensus 168 ~~Vin~S~G~~~~~~~~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~----------------- 230 (357)
T 4h6x_A 168 ANIIHCAFCRPTQTSEGEEILVQAIKKCQDNNVLIVSPTGNNSNESWCLPAVLPGTLAVGAAK----------------- 230 (357)
T ss_dssp CSEEEEC-----------CHHHHHHHHHHHTTCEEEEECC---------------CEEEEEEC-----------------
T ss_pred CCEEeeccccCCccccchhHHHHHHHHHhhCCeEEEecccCCCCCcCcCcccCCCCceEEEec-----------------
Confidence 999999999755 23445677888889999999999999999988888888899999999832
Q ss_pred EEEEeccCCcCCCCCccccEEEecCCCCCCCCcccCCCCCCCCccceEEEEeCCCCchhhhhHHHhhcCceEEEEecCCC
Q 044578 361 TGVSLYKGRRALLPNKQYPVVYMGSNSSNSSSLCLEGTLNPTTVAGKIVICDRGISPRVQKGQVVKDAGGIGVILANTAA 440 (769)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~ 440 (769)
T Consensus 231 -------------------------------------------------------------------------------- 230 (357)
T 4h6x_A 231 -------------------------------------------------------------------------------- 230 (357)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCccccccccccceEEEChhhhHHHHHHHhcCCCceEEEEecceeecccCCCeeccccCCCCCCCCCCcccCeeeeCCCc
Q 044578 441 NGEELVADCHLLPAVAVGEIEGKEIKQYASTSPKATASLALLGTRVGIKPSPVVAAFSSRGPNFLTLEILKPDIVAPGVN 520 (769)
Q Consensus 441 ~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~ 520 (769)
..+.++.||+||+. ..||||+|||++
T Consensus 231 -------------------------------------------------~~~~~~~fSn~G~~-----~~~~di~APG~~ 256 (357)
T 4h6x_A 231 -------------------------------------------------VDGTPCHFSNWGGN-----NTKEGILAPGEE 256 (357)
T ss_dssp -------------------------------------------------TTSSBCTTCC---C-----TTTTEEEEECSS
T ss_pred -------------------------------------------------cCCcccccccCCCC-----CCccceeecCCC
Confidence 12367899999975 458999999999
Q ss_pred eeecccCCCCCCCCCCCccccceeeeccccchhhhhHHHHHHHHhh----CCCCCHHHHHHHHHhcccccCCCCCCCCCC
Q 044578 521 ILAAWSGETGPSSLPADHRRVKFNILSGTSMSCPHVSGIAALLKAR----HPEWSPAAIKSALMTTAYVHDNTHNPLKDA 596 (769)
Q Consensus 521 I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~----~p~lsp~~ik~~L~~TA~~~~~~g~~~~~~ 596 (769)
|+++++.+ ..|..++|||||||||||++|||+++ +|.|+++|||++|++||++++..
T Consensus 257 i~s~~~~~------------~~~~~~sGTS~AaP~vaG~~All~s~~~~~~~~lt~~~v~~~L~~tA~~~~~~------- 317 (357)
T 4h6x_A 257 ILGAQPCT------------EEPVRLTGTSMAAPVMTGISALLMSLQVQQGKPVDAEAVRTALLKTAIPCDPE------- 317 (357)
T ss_dssp EEECCTTC------------SCCEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHC--------------
T ss_pred eEeccCCC------------CcccccCcHHHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHhhCccCCCC-------
Confidence 99998765 25778999999999999999999954 67899999999999999987532
Q ss_pred CCCCCCCCCCCCCcccCccccCC
Q 044578 597 SSYEPSSPYDHGAGHINPVKALD 619 (769)
Q Consensus 597 ~~~~~~~~~~~G~G~vd~~~Al~ 619 (769)
....+.+||+|+||+.+|++
T Consensus 318 ---~~~~~~~~G~G~vn~~~A~~ 337 (357)
T 4h6x_A 318 ---VVEEPERCLRGFVNIPGAMK 337 (357)
T ss_dssp ----------CTTCBCCHHHHHH
T ss_pred ---CCCCcccceeEEecHHHHHH
Confidence 12344589999999999997
No 17
>2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A*
Probab=100.00 E-value=1.6e-50 Score=433.78 Aligned_cols=291 Identities=26% Similarity=0.368 Sum_probs=230.2
Q ss_pred CcccCcCCCCCCCccccCCCCCCcEEEEeccccCCCCCCcccCCCCCCCCccccccccCCCcccccCCceeEeeEecccc
Q 044578 117 PLFLGLEPADSTSIWSQKVADYDVIVGVLDTGIWPESASFNDTGMTPVPAHWKGACETGRGFQKHHCNRKIVGARVFYRG 196 (769)
Q Consensus 117 ~~~~g~~~~~~~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~~~~~~~n~ki~g~~~~~~~ 196 (769)
...|+++.++.+.+|..+.+|+||+|||||||||++||+|.++ +...++|...
T Consensus 5 ~~~W~l~~i~~~~~w~~~~~G~gv~VaViDtGvd~~H~~l~~~---------------------------~~~~~~~~~~ 57 (310)
T 2ixt_A 5 QIPWGIKAIYNNDTLTSTTGGSGINIAVLDTGVNTSHPDLVNN---------------------------VEQCKDFTGA 57 (310)
T ss_dssp SSCHHHHHHHTCTTCCCCCCCTTCEEEEEESCCCTTCTTTTTT---------------------------EEEEEESSSS
T ss_pred cCCCchhhcCchhhhhccCCCCCcEEEEEecCCCCCCHHHhhc---------------------------ccccccccCC
Confidence 3458887777789999999999999999999999999999753 3334445433
Q ss_pred hhhccCcccccCCCCCCCCCCCChhhhhHhhccCCCCCCCccccccccceeeccCceEEEEEEeeCCC-CCHHHHHHHHH
Q 044578 197 YEAATGKINEQNEYKSPRDQDGHGTHTAATVAGSPVHGANLLGYAYGTARGMSTGARIAVYKVCWSGG-CFSSDILSAVD 275 (769)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~sdi~~ai~ 275 (769)
.. .......|..||||||||||+|...++. ..+.||||+|+|+.+|++++.+ +..+++++||+
T Consensus 58 ~~---------~~~~~~~d~~gHGT~vAgiia~~~~~n~-------~g~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~ 121 (310)
T 2ixt_A 58 TT---------PINNSCTDRNGHGTHVAGTALADGGSDQ-------AGIYGVAPDADLWAYKVLLDSGSGYSDDIAAAIR 121 (310)
T ss_dssp SS---------CEETCCCCSSSHHHHHHHHHHCBCCTTS-------CSCBCSCTTSEEEEEECSCTTSCCCHHHHHHHHH
T ss_pred CC---------CCCCCCCCCCCCHHHHHHHHhccCCCCC-------CceEEECCCCEEEEEEEEcCCCCCcHHHHHHHHH
Confidence 10 0112356889999999999999852211 1248999999999999998876 68889999999
Q ss_pred HHHhCCC-----cEEEeccCCCCCCCccchHHHHHHHHHhcCcEEEEecCCCCCC--CCcccCCCCceEEecCCCCCCce
Q 044578 276 RAVADGV-----NVLSISLGGGVSSYHRDSLSIATFGAMEMGVFVSCSAGNGGPD--PVSLTNVSPWITTVGASTLDRDF 348 (769)
Q Consensus 276 ~a~~~g~-----dVIn~SlG~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~G~~--~~~~~~~~p~vitVgA~~~~~~~ 348 (769)
|++++++ +|||||||.... ...+..++.++.++|++||+||||+|.. ...+++..|++|+|||.+..
T Consensus 122 ~a~~~~~~~~~~~Vin~S~G~~~~---~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~~~Pa~~~~vi~Vga~~~~--- 195 (310)
T 2ixt_A 122 HAADQATATGTKTIISMSLGSSAN---NSLISSAVNYAYSKGVLIVAAAGNSGYSQGTIGYPGALPNAIAVAALENV--- 195 (310)
T ss_dssp HHHHHHHHHTCCEEEEECCCBSSC---CHHHHHHHHHHHHTTCEEEEECCSCCSSTTCCCBTTTSTTSEEEEEEEEE---
T ss_pred HHHHhhhccCCCeEEEEcCCCCCC---CHHHHHHHHHHHhCCcEEEEcCCCCCCCCCCCCCcccCCCeeEEEecccc---
Confidence 9999988 999999998542 3566777778899999999999999976 34567788999999983210
Q ss_pred eeEEEeCCCcEEEEEEeccCCcCCCCCccccEEEecCCCCCCCCcccCCCCCCCCccceEEEEeCCCCchhhhhHHHhhc
Q 044578 349 PATVKLGTGRTITGVSLYKGRRALLPNKQYPVVYMGSNSSNSSSLCLEGTLNPTTVAGKIVICDRGISPRVQKGQVVKDA 428 (769)
Q Consensus 349 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~~~~~~~~ 428 (769)
T Consensus 196 -------------------------------------------------------------------------------- 195 (310)
T 2ixt_A 196 -------------------------------------------------------------------------------- 195 (310)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CceEEEEecCCCCCccccccccccceEEEChhhhHHHHHHHhcCCCceEEEEecceeecccCCC--eeccccCCCCCCCC
Q 044578 429 GGIGVILANTAANGEELVADCHLLPAVAVGEIEGKEIKQYASTSPKATASLALLGTRVGIKPSP--VVAAFSSRGPNFLT 506 (769)
Q Consensus 429 Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~a~fSS~GP~~~~ 506 (769)
...+ .++.||++||....
T Consensus 196 ------------------------------------------------------------~~~g~~~~~~~S~~G~~~~~ 215 (310)
T 2ixt_A 196 ------------------------------------------------------------QQNGTYRVADYSSRGYISTA 215 (310)
T ss_dssp ------------------------------------------------------------EETTEEEECTTSCCCCTTTT
T ss_pred ------------------------------------------------------------ccCCCeeeccccCCCCccCC
Confidence 0011 67889999995321
Q ss_pred ----CCcccCeeeeCCCceeecccCCCCCCCCCCCccccceeeeccccchhhhhHHHHHHHHhhCCCCCHHHHHHHHHhc
Q 044578 507 ----LEILKPDIVAPGVNILAAWSGETGPSSLPADHRRVKFNILSGTSMSCPHVSGIAALLKARHPEWSPAAIKSALMTT 582 (769)
Q Consensus 507 ----~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lsp~~ik~~L~~T 582 (769)
..+.||||+|||++|+++++.. .|..++|||||||||||++|||+|++|+|++.+||++|++|
T Consensus 216 g~~~~~~~~~di~ApG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~t 282 (310)
T 2ixt_A 216 GDYVIQEGDIEISAPGSSVYSTWYNG-------------GYNTISGTSMATPHVSGLAAKIWAENPSLSNTQLRSNLQER 282 (310)
T ss_dssp TSSSCCTTCCCEEEECSSEEEECTTS-------------SEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHH
T ss_pred ccccccCCCeeEECCCCCEeeecCCC-------------CEEeeccHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhh
Confidence 1345999999999999998764 79999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCCCCCcccCc
Q 044578 583 AYVHDNTHNPLKDASSYEPSSPYDHGAGHINP 614 (769)
Q Consensus 583 A~~~~~~g~~~~~~~~~~~~~~~~~G~G~vd~ 614 (769)
|++.+..+. ....+..+..+|||++|+
T Consensus 283 A~~~~~~~~-----~~a~~g~d~~~G~G~~~v 309 (310)
T 2ixt_A 283 AKSVDIKGG-----YGAAIGDDYASGFGFARV 309 (310)
T ss_dssp HHTSCCCBS-----TTCCSSSBTTTBTCBCCC
T ss_pred CcccCCCCC-----cccccCCccccccceeec
Confidence 998764321 112455667999999986
No 18
>2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A
Probab=100.00 E-value=3.4e-51 Score=440.30 Aligned_cols=275 Identities=30% Similarity=0.453 Sum_probs=225.9
Q ss_pred CcccCcCCCCCCCccccCCCCC--CcEEEEeccccCCCCCCcccCCCCCCCCccccccccCCCcccccCCceeEeeEecc
Q 044578 117 PLFLGLEPADSTSIWSQKVADY--DVIVGVLDTGIWPESASFNDTGMTPVPAHWKGACETGRGFQKHHCNRKIVGARVFY 194 (769)
Q Consensus 117 ~~~~g~~~~~~~~~~~~~~~G~--Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~~~~~~~n~ki~g~~~~~ 194 (769)
...|+++.++.+.+|+.+ +|+ ||+|||||||||++||+|.++ +...++|.
T Consensus 7 ~~~W~l~~i~~~~aw~~~-~G~~~gv~VaViDtGid~~Hp~l~~~---------------------------~~~~~~~~ 58 (320)
T 2z30_A 7 TIPWGIERVKAPSVWSIT-DGSVSVIQVAVLDTGVDYDHPDLAAN---------------------------IAWCVSTL 58 (320)
T ss_dssp CCCHHHHHTTCGGGTTTC-CSCCTTCEEEEEESCBCTTCTTTGGG---------------------------EEEEEECG
T ss_pred CCCCChhhcChHHHHHhc-CCCcCCeEEEEECCCCCCCChhHhcc---------------------------cccCcccc
Confidence 346888888889999998 899 999999999999999999753 33334443
Q ss_pred cchhhccCcccccCCCCCCCCCCCChhhhhHhhccCCCCCCCccccccccceeeccCceEEEEEEeeCCC-CCHHHHHHH
Q 044578 195 RGYEAATGKINEQNEYKSPRDQDGHGTHTAATVAGSPVHGANLLGYAYGTARGMSTGARIAVYKVCWSGG-CFSSDILSA 273 (769)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~sdi~~a 273 (769)
.+... ....+..|..||||||||||+|.. ++ .| +.||||+|+|+.+|+++..| +..+++++|
T Consensus 59 ~~~~~--------~~~~~~~d~~gHGT~vAgiia~~~-n~---~g-----~~GvAp~a~l~~~~v~~~~g~~~~~~i~~a 121 (320)
T 2z30_A 59 RGKVS--------TKLRDCADQNGHGTHVIGTIAALN-ND---IG-----VVGVAPGVQIYSVRVLDARGSGSYSDIAIG 121 (320)
T ss_dssp GGCCB--------CCHHHHBCSSSHHHHHHHHHHCCS-SS---BS-----CCCSSTTCEEEEEECSCTTSEEEHHHHHHH
T ss_pred CCccC--------CCCCCCCCCCCCHHHHHHHHHccc-CC---Cc-----eEeeCCCCEEEEEEeeCCCCCccHHHHHHH
Confidence 32100 000123678999999999999973 21 12 38999999999999998877 778899999
Q ss_pred HHHHHhC--------------------CCcEEEeccCCCCCCCccchHHHHHHHHHhcCcEEEEecCCCCCCCCcccCCC
Q 044578 274 VDRAVAD--------------------GVNVLSISLGGGVSSYHRDSLSIATFGAMEMGVFVSCSAGNGGPDPVSLTNVS 333 (769)
Q Consensus 274 i~~a~~~--------------------g~dVIn~SlG~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~ 333 (769)
|+||+++ +++|||||||.... ...+..++.++.++|++||+||||+|.....++...
T Consensus 122 i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~Vin~S~G~~~~---~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~Pa~~ 198 (320)
T 2z30_A 122 IEQAILGPDGVADKDGDGIIAGDPDDDAAEVISMSLGGPAD---DSYLYDMIIQAYNAGIVIVAASGNEGAPSPSYPAAY 198 (320)
T ss_dssp HHHHHHTTTTCSCTTSSSCCTTCTTSCCCSEEEECEEBSCC---CHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTS
T ss_pred HHHHHhCcccccccccccccccccccCCceEEEecCCCCCC---CHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccC
Confidence 9999987 99999999998542 345667777889999999999999998877888889
Q ss_pred CceEEecCCCCCCceeeEEEeCCCcEEEEEEeccCCcCCCCCccccEEEecCCCCCCCCcccCCCCCCCCccceEEEEeC
Q 044578 334 PWITTVGASTLDRDFPATVKLGTGRTITGVSLYKGRRALLPNKQYPVVYMGSNSSNSSSLCLEGTLNPTTVAGKIVICDR 413 (769)
Q Consensus 334 p~vitVgA~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~ 413 (769)
|++|+|||.+.
T Consensus 199 ~~vi~Vga~~~--------------------------------------------------------------------- 209 (320)
T 2z30_A 199 PEVIAVGAIDS--------------------------------------------------------------------- 209 (320)
T ss_dssp TTEEEEEEECT---------------------------------------------------------------------
T ss_pred CCeEEEEeeCC---------------------------------------------------------------------
Confidence 99999998321
Q ss_pred CCCchhhhhHHHhhcCceEEEEecCCCCCccccccccccceEEEChhhhHHHHHHHhcCCCceEEEEecceeecccCCCe
Q 044578 414 GISPRVQKGQVVKDAGGIGVILANTAANGEELVADCHLLPAVAVGEIEGKEIKQYASTSPKATASLALLGTRVGIKPSPV 493 (769)
Q Consensus 414 g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (769)
.+.
T Consensus 210 -----------------------------------------------------------------------------~~~ 212 (320)
T 2z30_A 210 -----------------------------------------------------------------------------NDN 212 (320)
T ss_dssp -----------------------------------------------------------------------------TSC
T ss_pred -----------------------------------------------------------------------------CCC
Confidence 126
Q ss_pred eccccCCCCCCCCCCcccCeeeeCCCceeecccCCCCCCCCCCCccccceeeeccccchhhhhHHHHHHHHhhC------
Q 044578 494 VAAFSSRGPNFLTLEILKPDIVAPGVNILAAWSGETGPSSLPADHRRVKFNILSGTSMSCPHVSGIAALLKARH------ 567 (769)
Q Consensus 494 ~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~------ 567 (769)
++.||++|| +|+|||++|+++++.. .|..++|||||||||||++|||+|++
T Consensus 213 ~~~~S~~g~----------~v~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~ 269 (320)
T 2z30_A 213 IASFSNRQP----------EVSAPGVDILSTYPDD-------------SYETLMGTAMATPHVSGVVALIQAAYYQKYGK 269 (320)
T ss_dssp BCTTSCSSC----------SEEEECSSEEEEETTT-------------EEEEECSHHHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred cCcccCCCC----------CEEeCCCCeEEeccCC-------------CeEeccCHHHHHHHHHHHHHHHHHhchhhccc
Confidence 788999996 7899999999998764 79999999999999999999999999
Q ss_pred -------CCCCHHHHHHHHHhcccccCCCCCCCCCCCCCCCCCCCCCCCcccCccccCCC
Q 044578 568 -------PEWSPAAIKSALMTTAYVHDNTHNPLKDASSYEPSSPYDHGAGHINPVKALDP 620 (769)
Q Consensus 568 -------p~lsp~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~G~G~vd~~~Al~~ 620 (769)
|.|++.+||++|++||+++... .....||||+||+.+|++.
T Consensus 270 ~~~~~~~p~lt~~~v~~~L~~ta~~~~~~------------g~~~~~G~G~vd~~~A~~~ 317 (320)
T 2z30_A 270 ILPVGTFDDISKNTVRGILHITADDLGPT------------GWDADYGYGVVRAALAVQA 317 (320)
T ss_dssp CCCCCCTTCCSTTSHHHHHHHHSBCCSSS------------SSBTTTBTCBCCHHHHHHH
T ss_pred ccccccCCCCCHHHHHHHHHhhCccCCCC------------CCCCCcCCceeCHHHHHHH
Confidence 9999999999999999987422 2345899999999999873
No 19
>2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli}
Probab=100.00 E-value=6.8e-51 Score=443.52 Aligned_cols=282 Identities=20% Similarity=0.139 Sum_probs=225.2
Q ss_pred CCcccCcCCCCCCCccccCCCCC--CcEEEEeccccCCCCCCcccCCCCCCCCccccccccCCCcccccCCceeEeeEec
Q 044578 116 SPLFLGLEPADSTSIWSQKVADY--DVIVGVLDTGIWPESASFNDTGMTPVPAHWKGACETGRGFQKHHCNRKIVGARVF 193 (769)
Q Consensus 116 s~~~~g~~~~~~~~~~~~~~~G~--Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~~~~~~~n~ki~g~~~~ 193 (769)
....|++..++..++|+. .+|+ ||+||||||||| +||+|.++ +...++|
T Consensus 21 ~~~~W~l~~i~~~~aw~~-~~G~~~gv~VaViDsGid-~Hp~l~~~---------------------------~~~~~~~ 71 (347)
T 2iy9_A 21 AEKPWYFDAIGLTETTMS-LTDKNTPVVVSVVDSGVA-FIGGLSDS---------------------------EFAKFSF 71 (347)
T ss_dssp --CCHHHHHHTCCHHHHH-TSCTTSCCEEEEEESCCC-CCGGGTTC---------------------------EEEEEEC
T ss_pred cccCcchhhCChHHHHHH-hcCCCCCCEEEEEcCCCc-CChhhhcC---------------------------cccCCcc
Confidence 345688877777889998 8999 999999999999 99999753 3344444
Q ss_pred ccchhhccCcccccCCCCCCCCCCCChhhhhHhhccCCCCCCCccccccccceeeccCceEEEEEEeeCCCCCHHHHHHH
Q 044578 194 YRGYEAATGKINEQNEYKSPRDQDGHGTHTAATVAGSPVHGANLLGYAYGTARGMSTGARIAVYKVCWSGGCFSSDILSA 273 (769)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~sdi~~a 273 (769)
..+.. ......+.|..||||||||||+|+ .| +.||||+|+|+.+|++++.+.. ++++|
T Consensus 72 ~~~~~--------~~~~~~~~d~~gHGT~vAgiia~~-------~g-----~~GvAp~a~l~~~~v~~~~~~~--~~~~a 129 (347)
T 2iy9_A 72 TQDGS--------PFPVKKSEALYIHGTAMASLIASR-------YG-----IYGVYPHALISSRRVIPDGVQD--SWIRA 129 (347)
T ss_dssp BTTCC--------SSCCSSSHHHHHHHHHHHHHHHCS-------SS-----SCCSSTTCEEEEEECCSSBCTT--HHHHH
T ss_pred cCCCC--------CCCCCCCCCCCCcHHHHHHHHhcc-------cC-----CcccCCCCEEEEEEEecCCCHH--HHHHH
Confidence 43210 011123567889999999999998 12 3899999999999999775533 99999
Q ss_pred HHHHHhC------CCcEEEeccCCCCCCCccchHHHHHHHHHhcCcEEEEecCCCCCC-------CCcccCCCC------
Q 044578 274 VDRAVAD------GVNVLSISLGGGVSSYHRDSLSIATFGAMEMGVFVSCSAGNGGPD-------PVSLTNVSP------ 334 (769)
Q Consensus 274 i~~a~~~------g~dVIn~SlG~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~G~~-------~~~~~~~~p------ 334 (769)
|+||+++ +++|||||||........+.+..++.++.++|++||+||||+|.. ...+++..+
T Consensus 130 i~~a~~~~~~~~~~~~Vin~S~G~~~~~~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~~~~~~Pa~~~~~~~~~ 209 (347)
T 2iy9_A 130 IESIMSNVFLAPGEEKIINISGGQKGVASASVWTELLSRMGRNNDRLIVAAVGNDGADIRKLSAQQRIWPAAYHPVSSVN 209 (347)
T ss_dssp HHHHHTCTTSCTTEEEEEEESSCBCCC-CCHHHHHHHHHHHHHTSCEEEEECCBSCCBTTTSCTTTSCBTTTCCCCSHHH
T ss_pred HHHHHhhhhcccCCceEEEeccccCCCCCcCHHHHHHHHHHHhCCeEEEEeCCCCCCCCCCcccccccCCCcCccccccc
Confidence 9999999 999999999976544456778888889999999999999999975 346677778
Q ss_pred ----ceEEecCCCC--CCceeeEEEeCCCcEEEEEEeccCCcCCCCCccccEEEecCCCCCCCCcccCCCCCCCCccceE
Q 044578 335 ----WITTVGASTL--DRDFPATVKLGTGRTITGVSLYKGRRALLPNKQYPVVYMGSNSSNSSSLCLEGTLNPTTVAGKI 408 (769)
Q Consensus 335 ----~vitVgA~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~c~~~~~~~~~~~g~i 408 (769)
++|+|||.+. +...
T Consensus 210 ~~~~~vi~Vga~~~~~~g~~------------------------------------------------------------ 229 (347)
T 2iy9_A 210 KKQDPVIRVAALAQYRKGET------------------------------------------------------------ 229 (347)
T ss_dssp HHTCCEEEEEEECCCCTTSC------------------------------------------------------------
T ss_pred cccCCEEEEEEcccCCCCce------------------------------------------------------------
Confidence 9999998432 1000
Q ss_pred EEEeCCCCchhhhhHHHhhcCceEEEEecCCCCCccccccccccceEEEChhhhHHHHHHHhcCCCceEEEEecceeecc
Q 044578 409 VICDRGISPRVQKGQVVKDAGGIGVILANTAANGEELVADCHLLPAVAVGEIEGKEIKQYASTSPKATASLALLGTRVGI 488 (769)
Q Consensus 409 vl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 488 (769)
.
T Consensus 230 -------------------------------------------------------------------------------~ 230 (347)
T 2iy9_A 230 -------------------------------------------------------------------------------P 230 (347)
T ss_dssp -------------------------------------------------------------------------------C
T ss_pred -------------------------------------------------------------------------------e
Confidence 0
Q ss_pred cCCCeeccccCCCCCCCCCCcccCeeeeCCCceeecccCCCCCCCCCCCccccceeeeccccchhhhhHHHHHHHHhhCC
Q 044578 489 KPSPVVAAFSSRGPNFLTLEILKPDIVAPGVNILAAWSGETGPSSLPADHRRVKFNILSGTSMSCPHVSGIAALLKARHP 568 (769)
Q Consensus 489 ~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p 568 (769)
.....++.||++||+ ||||+|||++|+++++.+ .|..++|||||||||||++|||+|++|
T Consensus 231 ~~~~~~~~fS~~G~~-------~~di~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~VaG~aAll~~~~p 290 (347)
T 2iy9_A 231 VLHGGGITGSRFGNN-------WVDIAAPGQNITFLRPDA-------------KTGTGSGTSEATAIVSGVLAAMTSCNP 290 (347)
T ss_dssp CBCCCSSSCBCBCTT-------TCSEEEECSSEEEECTTS-------------CEEEECSHHHHHHHHHHHHHHHHHHCT
T ss_pred cccCCCCCCCCCCCC-------CCEEEeCCCCeEeecCCC-------------CeEeccchHHHHHHHHHHHHHHHHhCC
Confidence 001255799999985 679999999999998864 799999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcccccCCCCCCCCCCCCCCCCCCCCCCCcccCccccCCC
Q 044578 569 EWSPAAIKSALMTTAYVHDNTHNPLKDASSYEPSSPYDHGAGHINPVKALDP 620 (769)
Q Consensus 569 ~lsp~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~G~G~vd~~~Al~~ 620 (769)
+|++.+||++|++||+++...+ ...+|+|+||+.+|++.
T Consensus 291 ~lt~~~v~~~L~~tA~~~~~~~-------------~~~~G~G~ld~~~A~~~ 329 (347)
T 2iy9_A 291 RATATELKRTLLESADKYPSLV-------------DKVTEGRVLNAEKAISM 329 (347)
T ss_dssp TSCHHHHHHHHHHHSEECGGGT-------------TTSGGGEECCHHHHHHH
T ss_pred CCCHHHHHHHHHHhCccCCCCC-------------CccccCCEecHHHHHHH
Confidence 9999999999999999875321 24999999999999984
No 20
>3zxy_A Subtilisin-like protein; hydrolase; 1.58A {Prochloron didemni} PDB: 3zxx_A
Probab=100.00 E-value=1.1e-50 Score=429.12 Aligned_cols=264 Identities=25% Similarity=0.314 Sum_probs=209.4
Q ss_pred CCCC-CCcEEEEeccccCCCCCCcccCCCCCCCCccccccccCCCcccccCCceeEeeEecccchhhccCcccccCCCCC
Q 044578 134 KVAD-YDVIVGVLDTGIWPESASFNDTGMTPVPAHWKGACETGRGFQKHHCNRKIVGARVFYRGYEAATGKINEQNEYKS 212 (769)
Q Consensus 134 ~~~G-~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~~~~ 212 (769)
..+| +||+|||||||||++||+|.++ .+..+.+... .....
T Consensus 3 ~l~G~~gV~VaViDtGid~~Hpdl~g~---------------------------~~~~~~~~~~-----------~~~~~ 44 (282)
T 3zxy_A 3 SLKGDHNIRVAILDGPVDIAHPCFQGA---------------------------DLTVLPTLAP-----------TAARS 44 (282)
T ss_dssp TCCCCTTSEEEEEESCCCTTSGGGTTC---------------------------EEEECCCSSC-----------CCCCT
T ss_pred CCcCCCCCEEEEEcCCCCCCChhHCCC---------------------------eeecCcCCCC-----------CCCCC
Confidence 3578 7999999999999999999753 1111111111 01112
Q ss_pred CCCCCCChhhhhHhhccCCCCCCCccccccccceeeccCceEEEEEEeeCCC--CCHHHHHHHHHHHHhCCCcEEEeccC
Q 044578 213 PRDQDGHGTHTAATVAGSPVHGANLLGYAYGTARGMSTGARIAVYKVCWSGG--CFSSDILSAVDRAVADGVNVLSISLG 290 (769)
Q Consensus 213 ~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g--~~~sdi~~ai~~a~~~g~dVIn~SlG 290 (769)
..|.+||||||||||+|+..++ +.||||+|+|+.+|++.+.+ ....++++||+||++++++|||||||
T Consensus 45 d~~~~gHGT~VAGiiag~~~~~----------~~GvAp~a~l~~~kv~~~~~~~~~~~~i~~ai~~a~~~~~~Vin~S~G 114 (282)
T 3zxy_A 45 DGFMSAHGTHVASIIFGQPETS----------VPGIAPQCRGLIVPIFSDDRRRITQLDLARGIERAVNAGAHIINISGG 114 (282)
T ss_dssp TCHHHHHHHHHHHHHHCCTTSS----------SCCSSTTSEEEEEECSCSSSSCCCHHHHHHHHHHHHHTTCSEEEECCC
T ss_pred CCCCCCcccceeehhhccCCce----------eeeeccccceEeeEeeccccccchHHHHHHHHHHhhccCCeEEeccCc
Confidence 3346799999999999985331 48999999999999986543 67788999999999999999999999
Q ss_pred CCCC-CCccchHHHHHHHHHhcCcEEEEecCCCCCCCCcccCCCCceEEecCCCCCCceeeEEEeCCCcEEEEEEeccCC
Q 044578 291 GGVS-SYHRDSLSIATFGAMEMGVFVSCSAGNGGPDPVSLTNVSPWITTVGASTLDRDFPATVKLGTGRTITGVSLYKGR 369 (769)
Q Consensus 291 ~~~~-~~~~~~~~~~~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 369 (769)
.... ......+..++.++.++|+++|+||||+|......+...|++|+|||.+
T Consensus 115 ~~~~~~~~~~~~~~ai~~a~~~gi~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~-------------------------- 168 (282)
T 3zxy_A 115 ELTDFGEADGWLENAVSLCRQNNVLLVAAAGNNGCDCLHVPAALPAVLAVGAMD-------------------------- 168 (282)
T ss_dssp EEESSSCCCHHHHHHHHHHHHTTCEEEEECCSSCSSCEEETTTSTTCEEEEEEC--------------------------
T ss_pred cccccccccHHHHHHHHHHhhcCceEEEecccCCCccccCccccceeEEEEEEc--------------------------
Confidence 7442 2334556777778999999999999999988888888899999999732
Q ss_pred cCCCCCccccEEEecCCCCCCCCcccCCCCCCCCccceEEEEeCCCCchhhhhHHHhhcCceEEEEecCCCCCccccccc
Q 044578 370 RALLPNKQYPVVYMGSNSSNSSSLCLEGTLNPTTVAGKIVICDRGISPRVQKGQVVKDAGGIGVILANTAANGEELVADC 449 (769)
Q Consensus 370 ~~~~~~~~~~l~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~ 449 (769)
T Consensus 169 -------------------------------------------------------------------------------- 168 (282)
T 3zxy_A 169 -------------------------------------------------------------------------------- 168 (282)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccceEEEChhhhHHHHHHHhcCCCceEEEEecceeecccCCCeeccccCCCCCCCCCCcccCeeeeCCCceeecccCCC
Q 044578 450 HLLPAVAVGEIEGKEIKQYASTSPKATASLALLGTRVGIKPSPVVAAFSSRGPNFLTLEILKPDIVAPGVNILAAWSGET 529 (769)
Q Consensus 450 ~~~p~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa~~~~~ 529 (769)
..+.++.||+||+. ..||||+|||++|+++.+.+
T Consensus 169 ----------------------------------------~~~~~~~~S~~~~~-----~~~~di~ApG~~i~s~~~~~- 202 (282)
T 3zxy_A 169 ----------------------------------------DHGHPLDFSNWGST-----YEQQGILAPGEDILGAKPGG- 202 (282)
T ss_dssp ----------------------------------------TTSCBCSSSCCCHH-----HHHHEEEEECSSEEEECTTS-
T ss_pred ----------------------------------------CCCccccccCCCCC-----ccccceeccCcceeeecCCC-
Confidence 12367889999874 46899999999999998875
Q ss_pred CCCCCCCCccccceeeeccccchhhhhHHHHHHHHhhC----CCCCHHHHHHHHHhcccccCCCCCCCCCCCCCCCCCCC
Q 044578 530 GPSSLPADHRRVKFNILSGTSMSCPHVSGIAALLKARH----PEWSPAAIKSALMTTAYVHDNTHNPLKDASSYEPSSPY 605 (769)
Q Consensus 530 ~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~----p~lsp~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~ 605 (769)
.|..++|||||||||||++|||+|++ |.++|++||++|++||++++.. .+....
T Consensus 203 ------------~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~~~~vk~~L~~tA~~~~~~----------~~~~~~ 260 (282)
T 3zxy_A 203 ------------GTERLSGTAFATPIVSGVAALLLSEQVRRGETPDPQKVRQLLLQSALPCDDD----------APEQAR 260 (282)
T ss_dssp ------------CEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHCBCC-----------------CG
T ss_pred ------------ceeecCCCcccchHHHHHHHHHHHHhHhhCCCCCHHHHHHHHHhhCeeCCCC----------CCCccC
Confidence 79999999999999999999999874 7899999999999999876432 233445
Q ss_pred CCCCcccCccccCC
Q 044578 606 DHGAGHINPVKALD 619 (769)
Q Consensus 606 ~~G~G~vd~~~Al~ 619 (769)
.+|+|+||+.+|++
T Consensus 261 ~~G~G~ln~~~A~~ 274 (282)
T 3zxy_A 261 RCLAGRLNVSGAFT 274 (282)
T ss_dssp GGTTCBCCHHHHHH
T ss_pred ceeeeEeCHHHHHH
Confidence 89999999999986
No 21
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=100.00 E-value=6.4e-49 Score=470.77 Aligned_cols=353 Identities=19% Similarity=0.212 Sum_probs=248.8
Q ss_pred CCCCCChhhhhHhhccCCCCCCCccccccccceeeccCceEEEEEEeeCCC---CCHHHHHHHHHHHHh-----CCCcEE
Q 044578 214 RDQDGHGTHTAATVAGSPVHGANLLGYAYGTARGMSTGARIAVYKVCWSGG---CFSSDILSAVDRAVA-----DGVNVL 285 (769)
Q Consensus 214 ~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g---~~~sdi~~ai~~a~~-----~g~dVI 285 (769)
.|++||||||||||||.. ++. | +.||||+|+|+.+|+++..+ ....+++.+|.+|++ .|++||
T Consensus 267 ~D~~GHGThVAGIIAa~~-N~~---g-----~~GVAP~AkI~~vKVld~~~g~~~t~s~l~~AI~~Aid~a~~~~gadVI 337 (1354)
T 3lxu_X 267 GMSSPHGTHVSSIASGNH-SSR---D-----VDGVAPNAKIVSMTIGDGRLGSMETGTALVRAMTKVMELCRDGRRIDVI 337 (1354)
T ss_dssp ECCCHHHHHHHHHHCCCC-SSS---S-----SCCSCTTCEEEEEECBCTTTSSCBCHHHHHHHHHHHHHHHHTTCCCCEE
T ss_pred CCCCCcHHHHHHHHhcCC-CCC---C-----ceeecCCCEEEEEEeccCCCCcccChHHHHHHHHHHHHHHhhcCCceEE
Confidence 478999999999999996 322 1 38999999999999997654 255678888888777 799999
Q ss_pred EeccCCCCCCCccchHHHHHHHHH-hcCcEEEEecCCCCCCCCc--ccC--CCCceEEecCCCCCCceeeEEEeCCCcEE
Q 044578 286 SISLGGGVSSYHRDSLSIATFGAM-EMGVFVSCSAGNGGPDPVS--LTN--VSPWITTVGASTLDRDFPATVKLGTGRTI 360 (769)
Q Consensus 286 n~SlG~~~~~~~~~~~~~~~~~a~-~~Gi~vV~AAGN~G~~~~~--~~~--~~p~vitVgA~~~~~~~~~~~~~~~g~~~ 360 (769)
|||||........+.+..++.++. ++|++||+||||+|....+ .++ ..+++|+|||++...........
T Consensus 338 NmS~G~~~~~~~~~~l~~aI~~A~~~~GVlVVaAAGN~G~~~~ti~~PA~~ss~~VItVGAtd~~~~~~a~ys~------ 411 (1354)
T 3lxu_X 338 NMSYGEHANWSNSGRIGELMNEVVNKYGVVWVASAGNHGPALCTVGTPPDISQPSLIGVGAYVSPQMMEAEYAM------ 411 (1354)
T ss_dssp EECCCCCCSCSSCCHHHHHHHHHHHTSCCEEEEECCSCCSSSSCCCTTTCSSSSCEEEEEEECCTTCCCC----------
T ss_pred EcCCccCCCCCccHHHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCcccccCCceEEEEeecCCCCccccccc------
Confidence 999998764444566777777776 8999999999999986543 455 37999999996533211000000
Q ss_pred EEEEeccCCcCCCCCccccEEEecCCCCCCCCcccCCCCCCCCccceEEEEeCCCCchhhhhHHHhhcCceEEEEecCCC
Q 044578 361 TGVSLYKGRRALLPNKQYPVVYMGSNSSNSSSLCLEGTLNPTTVAGKIVICDRGISPRVQKGQVVKDAGGIGVILANTAA 440 (769)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~ 440 (769)
T Consensus 412 -------------------------------------------------------------------------------- 411 (1354)
T 3lxu_X 412 -------------------------------------------------------------------------------- 411 (1354)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCccccccccccceEEEChhhhHHHHHHHhcCCCceEEEEecceeecccCCCeeccccCCCCCCCCCCcccCeeeeCCCc
Q 044578 441 NGEELVADCHLLPAVAVGEIEGKEIKQYASTSPKATASLALLGTRVGIKPSPVVAAFSSRGPNFLTLEILKPDIVAPGVN 520 (769)
Q Consensus 441 ~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~ 520 (769)
.....+.++.|||+||+. ++++||||+|||++
T Consensus 412 ----------------------------------------------~~~~~g~~asFSS~GPt~--dg~~KpDIaAPG~~ 443 (1354)
T 3lxu_X 412 ----------------------------------------------REKLPGNVYTWTSRDPCI--DGGQGVTVCAPGGA 443 (1354)
T ss_dssp ----------------------------------------------------CCCCCCCCSCCS--SSSCCEEEEEEC--
T ss_pred ----------------------------------------------ccCCCCccccccCCCCCc--cCCCcceEEecCce
Confidence 001123789999999998 58999999999999
Q ss_pred eeecccCCCCCCCCCCCccccceeeeccccchhhhhHHHHHHHHh----hCCCCCHHHHHHHHHhcccccCCCCCCCCCC
Q 044578 521 ILAAWSGETGPSSLPADHRRVKFNILSGTSMSCPHVSGIAALLKA----RHPEWSPAAIKSALMTTAYVHDNTHNPLKDA 596 (769)
Q Consensus 521 I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q----~~p~lsp~~ik~~L~~TA~~~~~~g~~~~~~ 596 (769)
|.++..... +.|..++|||||||||||++|||++ .+|.|++.+||++|++||++...
T Consensus 444 I~St~~~~~-----------~~y~~~SGTSmAAP~VAGvAALLLSalkq~~P~LTp~qVk~lL~~TA~~~~~-------- 504 (1354)
T 3lxu_X 444 IASVPQFTM-----------SKSQLMNGTSMAAPHVAGAVALLISGLKQQNIEYSPYSIKRAISVTATKLGY-------- 504 (1354)
T ss_dssp ------------------------CCCCGGGCHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTSBCCTT--------
T ss_pred EEEeecCCC-----------CceecCCCCCHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHHhCccCCC--------
Confidence 999755321 2789999999999999999999986 79999999999999999998742
Q ss_pred CCCCCCCCCCCCCcccCccccCCCCceeccCccchhhhcccCCCCc-cceeeeeccccccccCCCCCCCCCCcCceeeec
Q 044578 597 SSYEPSSPYDHGAGHINPVKALDPGLIYDINAQDYFDFLCSQKLTP-MELQVFRKYANRTCRHSIAKPGDLNYPAISVVF 675 (769)
Q Consensus 597 ~~~~~~~~~~~G~G~vd~~~Al~~~lv~d~~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ln~ps~~~~~ 675 (769)
.+++.||+|+||+.+|++..+.++..+.+++.|+|..+... ..|.+-. ...+
T Consensus 505 -----~~~~~~G~GlLDa~~AV~~a~~~~~~p~~~v~f~~~v~~~~~rgIylR~----------------~~~~------ 557 (1354)
T 3lxu_X 505 -----VDPFAQGHGLLNVEKAFEHLTEHRQSKDNMLRFSVRVGNNADKGIHLRQ----------------GVQR------ 557 (1354)
T ss_dssp -----SCTTTSSSSBCCHHHHHHHHHTTTTCGGGGEEEEEEETTTTBSSEEECS----------------SCCC------
T ss_pred -----CCcccccCCEeCHHHHHHHHHhcCCCCccceEEEEEecCCCCCceEEec----------------cccC------
Confidence 23458999999999999999999999999999999987532 2221110 0000
Q ss_pred cCCCcceeEEEEEEEEEeC----C---C-CeeE--EEEEeCCCCcEEEEecCeEEEeecCeeEEEEEEEEeeCCCCCcEE
Q 044578 676 PETANVSALTLRRTVTNVG----P---P-VSNY--HVVVSPFKGVAIKVEPQKLHFTKKYQKLSYKITFTTKSPETIPEF 745 (769)
Q Consensus 676 ~~~~~~~~~~~~~tv~n~~----~---~-~~ty--~~~v~~~~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~~~~~~~ 745 (769)
...+++++|+.+- . . ...| ++...... --|+ -|..|.+ .++.++|.|+|++.....+.++
T Consensus 558 ------~~~~~tv~V~p~f~~~~~~~~~~~i~f~~~l~L~~t~-~wv~-~p~~l~l--~~~~r~~~v~vDp~~L~~G~h~ 627 (1354)
T 3lxu_X 558 ------NSIDYNVYIEPIFYNDKEADPKDKFNFNVRLNLIASQ-PWVQ-CGAFLDL--SYGTRSIAVRVDPTGLQPGVHS 627 (1354)
T ss_dssp ------SCEEEEEEEEEEESSCSCSSSTTCSCCCCEEEEEESS-TTEE-ECSCEEC--TTSCEEEEEEECGGGCCSEEEE
T ss_pred ------CceEEEEEEeeeecCcccCChhhccceEEEEEEecCC-Ccee-cccceee--cCCCceEEEEECCCCCCCccee
Confidence 1223333332221 1 1 1112 22222211 1232 4887776 6889999999999987789999
Q ss_pred EEEEEEc-----CceeEEeEEEEEe
Q 044578 746 GGLIWKD-----GVHKVRSPIVITR 765 (769)
Q Consensus 746 G~~~~~~-----~~~~v~~P~~~~~ 765 (769)
+.|..-| .++..|+||.|..
T Consensus 628 ~~v~~~D~~~~~~gp~f~ipvTv~~ 652 (1354)
T 3lxu_X 628 AVIRAYDTDCVQKGSLFEIPVTVVQ 652 (1354)
T ss_dssp EEEEEEESSCTTSCCSEEEEEEEEE
T ss_pred EEEEEEEcCCcccCceEEeeEEEEe
Confidence 9999775 5899999998863
No 22
>4h6w_A N-terminal cyanobactin protease; hydrolase; 2.45A {Planktothrix agardhii nies-596}
Probab=100.00 E-value=4.5e-50 Score=429.83 Aligned_cols=270 Identities=26% Similarity=0.318 Sum_probs=217.0
Q ss_pred CCccccCCCCCCcEEEEeccccCCCCCCcccCCCCCCCCccccccccCCCcccccCCceeEeeEecccchhhccCccccc
Q 044578 128 TSIWSQKVADYDVIVGVLDTGIWPESASFNDTGMTPVPAHWKGACETGRGFQKHHCNRKIVGARVFYRGYEAATGKINEQ 207 (769)
Q Consensus 128 ~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~ 207 (769)
+++|+....++||+|||||||||++||+|.++ .+.+..++..+.
T Consensus 11 ~~aW~~~~G~~gV~VaViDtGid~~Hpdl~g~--------------------------~~~~~~~~~~~~---------- 54 (306)
T 4h6w_A 11 KKLWSETRGDPKICVAVLDGIVDQNHPCFIGA--------------------------DLTRLPSLVSGE---------- 54 (306)
T ss_dssp HHHHHHCSCCTTCEEEEESSCCCTTSGGGTTC--------------------------EEEECC----------------
T ss_pred HHHHhhhCCCCCCEEEEEcCCCCCCChhHcCC--------------------------cccCCCcccCCC----------
Confidence 67999988789999999999999999999754 112222222221
Q ss_pred CCCCCCCCCCCChhhhhHhhccCCCCCCCccccccccceeeccCceEEEEEEeeCCC--CCHHHHHHHHHHHHhCCCcEE
Q 044578 208 NEYKSPRDQDGHGTHTAATVAGSPVHGANLLGYAYGTARGMSTGARIAVYKVCWSGG--CFSSDILSAVDRAVADGVNVL 285 (769)
Q Consensus 208 ~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g--~~~sdi~~ai~~a~~~g~dVI 285 (769)
.....|..||||||||||+|+.++ .+.||||+|+|+.+|++.+.+ ....++++||+||++++++||
T Consensus 55 --~~~~~d~~gHGThVAGiiag~~~~----------~~~GVAp~a~l~~~kv~~~~~~~~~~~~i~~ai~~a~~~g~~vi 122 (306)
T 4h6w_A 55 --ANANGSMSTHGTHVASIIFGQHDS----------PVTGIAPQCRGLIVPVFADESLKLSQLDLSRAIEQAVNNGANII 122 (306)
T ss_dssp ------CCCCHHHHHHHHHHHCCTTS----------SSCCSSTTSEEEECCCCCSSSCCCCHHHHHHHHHHHHHTTCSEE
T ss_pred --CCCCCCCCCchHHHHHHHHccccC----------CcceeccccccceeeccccccccchHHHHHHHHHHhhcccceee
Confidence 112456789999999999997532 248999999999999996553 677889999999999999999
Q ss_pred EeccCCCC-CCCccchHHHHHHHHHhcCcEEEEecCCCCCCCCcccCCCCceEEecCCCCCCceeeEEEeCCCcEEEEEE
Q 044578 286 SISLGGGV-SSYHRDSLSIATFGAMEMGVFVSCSAGNGGPDPVSLTNVSPWITTVGASTLDRDFPATVKLGTGRTITGVS 364 (769)
Q Consensus 286 n~SlG~~~-~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~~~g~~~~~~~ 364 (769)
|+|||... .......+..++.++.++|+++|+||||+|.....++...+++|+|||.+.
T Consensus 123 ~~s~g~~~~~~~~~~~~~~ai~~a~~~gi~vvaaagn~g~~~~~~Pa~~~~vi~Vga~~~-------------------- 182 (306)
T 4h6w_A 123 NVSAGQLTDAGEADTWLEKAIQLCQENNVLLIAATGNDGCECLHVPASLPTVLAVGAMDD-------------------- 182 (306)
T ss_dssp EECCCEEESSSCCCHHHHHHHHHHHHTTCEEEEECCSSSSBCEEETTTSTTCEEEEEECT--------------------
T ss_pred eccccccccCCCccHHHHHHHHHHHHcCCeEEEecCCCCcccccccccCCcceEEEEecC--------------------
Confidence 99999643 233345677778889999999999999999888788888899999997321
Q ss_pred eccCCcCCCCCccccEEEecCCCCCCCCcccCCCCCCCCccceEEEEeCCCCchhhhhHHHhhcCceEEEEecCCCCCcc
Q 044578 365 LYKGRRALLPNKQYPVVYMGSNSSNSSSLCLEGTLNPTTVAGKIVICDRGISPRVQKGQVVKDAGGIGVILANTAANGEE 444 (769)
Q Consensus 365 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~ 444 (769)
T Consensus 183 -------------------------------------------------------------------------------- 182 (306)
T 4h6w_A 183 -------------------------------------------------------------------------------- 182 (306)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccccceEEEChhhhHHHHHHHhcCCCceEEEEecceeecccCCCeeccccCCCCCCCCCCcccCeeeeCCCceeec
Q 044578 445 LVADCHLLPAVAVGEIEGKEIKQYASTSPKATASLALLGTRVGIKPSPVVAAFSSRGPNFLTLEILKPDIVAPGVNILAA 524 (769)
Q Consensus 445 ~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa 524 (769)
.+.+++||++|+. ..||||+|||++|+++
T Consensus 183 ----------------------------------------------~~~~~~~s~~g~~-----~~~~di~APG~~i~s~ 211 (306)
T 4h6w_A 183 ----------------------------------------------QGKPVDFSNWGDA-----YQKQGILAPGKDILGA 211 (306)
T ss_dssp ----------------------------------------------TSCBCSSSCBCHH-----HHHHEEEEECSSEEEE
T ss_pred ----------------------------------------------CCCccccccccCC-----cCcceeecCCcCcccc
Confidence 1267789999964 4689999999999999
Q ss_pred ccCCCCCCCCCCCccccceeeeccccchhhhhHHHHHHHHhh----CCCCCHHHHHHHHHhcccccCCCCCCCCCCCCCC
Q 044578 525 WSGETGPSSLPADHRRVKFNILSGTSMSCPHVSGIAALLKAR----HPEWSPAAIKSALMTTAYVHDNTHNPLKDASSYE 600 (769)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~----~p~lsp~~ik~~L~~TA~~~~~~g~~~~~~~~~~ 600 (769)
.+.+ .|..++|||||||||||++|||+++ +|.|+|+|||++|++||+++...+
T Consensus 212 ~~~~-------------~~~~~sGTS~AaP~VaG~~All~s~~~~~~p~~t~~~v~~~L~~tA~~~~~~~---------- 268 (306)
T 4h6w_A 212 KPNG-------------GTIRLSGTSFATPIVSGVAALLLSLQIKRGEKPDPQKVKNALLASATPCNPKD---------- 268 (306)
T ss_dssp CTTS-------------CEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTCBCCCTTT----------
T ss_pred cCCC-------------ceeccCCCcchhHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHhhCccCCCCC----------
Confidence 8875 7999999999999999999999865 699999999999999999875432
Q ss_pred CCCCCCCCCcccCccccCC
Q 044578 601 PSSPYDHGAGHINPVKALD 619 (769)
Q Consensus 601 ~~~~~~~G~G~vd~~~Al~ 619 (769)
......||+|+||+.+|++
T Consensus 269 ~~~~~~~G~G~ln~~~Av~ 287 (306)
T 4h6w_A 269 TDDQSRCLMGKLNILDAIE 287 (306)
T ss_dssp CSCGGGGTTCBCCHHHHHH
T ss_pred CCCCCCcceeecCHHHHHH
Confidence 1223479999999999997
No 23
>3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A
Probab=100.00 E-value=1.3e-49 Score=432.40 Aligned_cols=307 Identities=23% Similarity=0.348 Sum_probs=224.2
Q ss_pred ccCcCC---CCCCCccccCCCCCCcEEEEeccccCCCCCCcccCCCCCCCCccccccccCCCcccccCCce---eEeeEe
Q 044578 119 FLGLEP---ADSTSIWSQKVADYDVIVGVLDTGIWPESASFNDTGMTPVPAHWKGACETGRGFQKHHCNRK---IVGARV 192 (769)
Q Consensus 119 ~~g~~~---~~~~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~~~~~~~n~k---i~g~~~ 192 (769)
+|++.. ++...+|+.+++|+||+||||||||+ +||+|.++-.. .|+ ...........+.+ -.....
T Consensus 10 qW~l~~~~~i~~~~aw~~g~~G~gV~VaViDtGi~-~hp~l~~~~~~----~~~---~~~~~~~~~d~~~~~~~~~~~~~ 81 (340)
T 3lpc_A 10 QWHYFDRYGVKADKVWDMGFTGQNVVVAVVDTGIL-HHRDLNANVLP----GYD---FISNSQISLDGDGRDADPFDEGD 81 (340)
T ss_dssp CHHHHSTTSCCHHHHHHHTCSCTTCEEEEEESCBC-CCTTTGGGBCC----CEE---CCCCHHHHCSSSSSBSCCBCCCC
T ss_pred ccCCCCcCCCCHHHHHHhcCCCCCeEEEEEcCCCC-CChhhhccccc----Ccc---ccCCccccccCCCccCCcccccc
Confidence 455433 44478999999999999999999998 99999764111 110 00000000000000 000000
Q ss_pred cccchhhccCcccccCCCCCCCCCCCChhhhhHhhccCCCCCCCccccccccceeeccCceEEEEEEeeCCCCCHHHHHH
Q 044578 193 FYRGYEAATGKINEQNEYKSPRDQDGHGTHTAATVAGSPVHGANLLGYAYGTARGMSTGARIAVYKVCWSGGCFSSDILS 272 (769)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~sdi~~ 272 (769)
+.+.+... ..+.+.....|..||||||||||+|...+..+ +.||||+|+|+.+|+++..++..+++++
T Consensus 82 ~~~~~~~~----~~~~~~~~~~d~~gHGT~vAgiia~~~~~~~g--------~~GvAp~a~l~~~~v~~~~~~~~~~~~~ 149 (340)
T 3lpc_A 82 WFDNWACG----GRPDPRKERSDSSWHGSHVAGTIAAVTNNRIG--------VAGVAYGAKVVPVRALGRCGGYDSDISD 149 (340)
T ss_dssp CBCTTTTS----CTTCGGGSCBCCCCHHHHHHHHHHCCCSSSSS--------CCCTTTTSEEEEEECCBTTBCCHHHHHH
T ss_pred cccccccc----CCCCcccCCCCCCCCHHHHHHHHHccCCCCCc--------ceeecCCCEEEEEEEecCCCCcHHHHHH
Confidence 00000000 01112223578899999999999998655432 3899999999999999888888999999
Q ss_pred HHHHHHh----------CCCcEEEeccCCCCCCCccchHHHHHHHHHhcCcEEEEecCCCCCCCC-cccCCCCceEEecC
Q 044578 273 AVDRAVA----------DGVNVLSISLGGGVSSYHRDSLSIATFGAMEMGVFVSCSAGNGGPDPV-SLTNVSPWITTVGA 341 (769)
Q Consensus 273 ai~~a~~----------~g~dVIn~SlG~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~~p~vitVgA 341 (769)
||+|+++ .+++|||||||... .....+..++.++.++|++||+||||+|.... ..+...+++|+|||
T Consensus 150 ai~~a~~~~~~~~~~~~~~~~Vin~S~G~~~--~~~~~~~~~~~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga 227 (340)
T 3lpc_A 150 GLYWAAGGRIAGIPENRNPAKVINMSLGSDG--QCSYNAQTMIDRATRLGALVVVAAGNENQNASNTWPTSCNNVLSVGA 227 (340)
T ss_dssp HHHHHHTCCCTTSCCCSSCCSEEEECCCEES--CCCHHHHHHHHHHHHHTCEEEEECCSSSSBGGGEETTTSSSCEEEEE
T ss_pred HHHHHhcccccccccccCCCeEEEeCcCCCC--CcchhHHHHHHHHHhCCcEEEEeCCCCCCCCCCcCCccCCceEEEec
Confidence 9999998 88999999999743 22345666777888999999999999997654 46778899999997
Q ss_pred CCCCCceeeEEEeCCCcEEEEEEeccCCcCCCCCccccEEEecCCCCCCCCcccCCCCCCCCccceEEEEeCCCCchhhh
Q 044578 342 STLDRDFPATVKLGTGRTITGVSLYKGRRALLPNKQYPVVYMGSNSSNSSSLCLEGTLNPTTVAGKIVICDRGISPRVQK 421 (769)
Q Consensus 342 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~ 421 (769)
.+.
T Consensus 228 ~~~----------------------------------------------------------------------------- 230 (340)
T 3lpc_A 228 TTS----------------------------------------------------------------------------- 230 (340)
T ss_dssp ECT-----------------------------------------------------------------------------
T ss_pred CCC-----------------------------------------------------------------------------
Confidence 321
Q ss_pred hHHHhhcCceEEEEecCCCCCccccccccccceEEEChhhhHHHHHHHhcCCCceEEEEecceeecccCCCeeccccCCC
Q 044578 422 GQVVKDAGGIGVILANTAANGEELVADCHLLPAVAVGEIEGKEIKQYASTSPKATASLALLGTRVGIKPSPVVAAFSSRG 501 (769)
Q Consensus 422 ~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fSS~G 501 (769)
.+.++.||++|
T Consensus 231 ---------------------------------------------------------------------~~~~~~~S~~g 241 (340)
T 3lpc_A 231 ---------------------------------------------------------------------RGIRASFSNYG 241 (340)
T ss_dssp ---------------------------------------------------------------------TSSBCTTCCBS
T ss_pred ---------------------------------------------------------------------CCCcCCCCCCC
Confidence 12678999999
Q ss_pred CCCCCCCcccCeeeeCCCceeecccCCCCCCCCCCCccccceeeeccccchhhhhHHHHHHHHhh-C---CCCCHHHHHH
Q 044578 502 PNFLTLEILKPDIVAPGVNILAAWSGETGPSSLPADHRRVKFNILSGTSMSCPHVSGIAALLKAR-H---PEWSPAAIKS 577 (769)
Q Consensus 502 P~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~-~---p~lsp~~ik~ 577 (769)
| ||||+|||++|+++++..... .....|..++|||||||||||++|||+|+ + |.|++++||+
T Consensus 242 ~--------~~di~ApG~~i~s~~~~~~~~------~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~p~lt~~~v~~ 307 (340)
T 3lpc_A 242 V--------DVDLAAPGQDILSTVDSGTRR------PVSDAYSFMAGTSMATPHVSGVAALVISAANSVNKNLTPAELKD 307 (340)
T ss_dssp T--------TCCEEEECSSEEEEEESCSSS------CCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHH
T ss_pred C--------CceEEecCCCeecccCCCCcC------CCCCcceecccHhHHHHHHHHHHHHHHHhhhhhCCCCCHHHHHH
Confidence 7 459999999999998765321 11236999999999999999999999998 5 9999999999
Q ss_pred HHHhcccccCCCCCCCCCCCCCCCCCCCCCCCcccCccccCCC
Q 044578 578 ALMTTAYVHDNTHNPLKDASSYEPSSPYDHGAGHINPVKALDP 620 (769)
Q Consensus 578 ~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~G~G~vd~~~Al~~ 620 (769)
+|++||++... .....+|+|+||+.+|++.
T Consensus 308 ~L~~tA~~~~~-------------~~~~~~G~G~vd~~~Av~~ 337 (340)
T 3lpc_A 308 VLVSTTSPFNG-------------RLDRALGSGIVDAEAAVNS 337 (340)
T ss_dssp HHHHTCBCCSS-------------CCSSCCCSSBCCHHHHHHH
T ss_pred HHHhcCCcCCC-------------CCCCCcccceecHHHHHHH
Confidence 99999998741 1234899999999999874
No 24
>1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A*
Probab=100.00 E-value=2.7e-48 Score=409.65 Aligned_cols=245 Identities=31% Similarity=0.474 Sum_probs=205.2
Q ss_pred cccCcCCCCC-----CCccccCCCCCCcEEEEeccccCCCCCCcccCCCCCCCCccccccccCCCcccccCCceeEeeEe
Q 044578 118 LFLGLEPADS-----TSIWSQKVADYDVIVGVLDTGIWPESASFNDTGMTPVPAHWKGACETGRGFQKHHCNRKIVGARV 192 (769)
Q Consensus 118 ~~~g~~~~~~-----~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~~~~~~~n~ki~g~~~ 192 (769)
..|+++++.+ .++|..+++|+||+|+|||||||++||+|.++ +...++
T Consensus 4 ~~W~l~~i~~~~~~~~~aw~~~~~G~gv~VaViDtGvd~~h~~l~~~---------------------------~~~~~~ 56 (284)
T 1sh7_A 4 AIWGLDRIDQRNLPLDRNYNANFDGFGVTAYVIDTGVNNNHEEFGGR---------------------------SVSGYD 56 (284)
T ss_dssp CCHHHHHHTCSSSSCCSBCCCSCCCTTCEEEEEESCCCTTCTTTTTC---------------------------EEEEEE
T ss_pred CCcChhhcCCcccCchhhhhcCCCCCCCEEEEEcCCCCCCChhHcCC---------------------------cccccc
Confidence 3455544432 46899999999999999999999999999753 333444
Q ss_pred cccchhhccCcccccCCCCCCCCCCCChhhhhHhhccCCCCCCCccccccccceeeccCceEEEEEEeeCCC-CCHHHHH
Q 044578 193 FYRGYEAATGKINEQNEYKSPRDQDGHGTHTAATVAGSPVHGANLLGYAYGTARGMSTGARIAVYKVCWSGG-CFSSDIL 271 (769)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~sdi~ 271 (769)
|.++ ...+.|..||||||||||+|+. .||||+|+|+.+|++++.+ +..++++
T Consensus 57 ~~~~-------------~~~~~d~~gHGT~vAgiia~~~--------------~GvAp~a~l~~~kv~~~~g~~~~~~~~ 109 (284)
T 1sh7_A 57 FVDN-------------DADSSDCNGHGTHVAGTIGGSQ--------------YGVAKNVNIVGVRVLSCSGSGTTSGVI 109 (284)
T ss_dssp TTTT-------------BSCCCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECBCTTSCBCHHHHH
T ss_pred ccCC-------------CCCCCCCCCcHHHHHHHHhccc--------------CCcCCCCEEEEEEeeCCCCCcCHHHHH
Confidence 4432 1236788999999999999873 7999999999999998876 7888999
Q ss_pred HHHHHHHhC--CCcEEEeccCCCCCCCccchHHHHHHHHHhcCcEEEEecCCCCCCCC-cccCCCCceEEecCCCCCCce
Q 044578 272 SAVDRAVAD--GVNVLSISLGGGVSSYHRDSLSIATFGAMEMGVFVSCSAGNGGPDPV-SLTNVSPWITTVGASTLDRDF 348 (769)
Q Consensus 272 ~ai~~a~~~--g~dVIn~SlG~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~~p~vitVgA~~~~~~~ 348 (769)
+||+|++++ +++|||||||... ...+..++.++.++|++||+||||+|.... ..+...|++|+|||.+.
T Consensus 110 ~ai~~a~~~~~~~~Vin~S~G~~~----~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~---- 181 (284)
T 1sh7_A 110 SGVDWVAQNASGPSVANMSLGGGQ----STALDSAVQGAIQSGVSFMLAAGNSNADACNTSPARVPSGVTVGSTTS---- 181 (284)
T ss_dssp HHHHHHHHHCCSSEEEEECCCBSC----CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGSBTTTCTTSEEEEEECT----
T ss_pred HHHHHHHhCCCCCcEEEeCCCCCC----CHHHHHHHHHHHHCCCEEEEECCcCCCCCCccccccCCCeEEEEEecC----
Confidence 999999984 7999999999863 356777777889999999999999997653 45777899999997321
Q ss_pred eeEEEeCCCcEEEEEEeccCCcCCCCCccccEEEecCCCCCCCCcccCCCCCCCCccceEEEEeCCCCchhhhhHHHhhc
Q 044578 349 PATVKLGTGRTITGVSLYKGRRALLPNKQYPVVYMGSNSSNSSSLCLEGTLNPTTVAGKIVICDRGISPRVQKGQVVKDA 428 (769)
Q Consensus 349 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~~~~~~~~ 428 (769)
T Consensus 182 -------------------------------------------------------------------------------- 181 (284)
T 1sh7_A 182 -------------------------------------------------------------------------------- 181 (284)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CceEEEEecCCCCCccccccccccceEEEChhhhHHHHHHHhcCCCceEEEEecceeecccCCCeeccccCCCCCCCCCC
Q 044578 429 GGIGVILANTAANGEELVADCHLLPAVAVGEIEGKEIKQYASTSPKATASLALLGTRVGIKPSPVVAAFSSRGPNFLTLE 508 (769)
Q Consensus 429 Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fSS~GP~~~~~~ 508 (769)
.+.++.||++||.+
T Consensus 182 --------------------------------------------------------------~~~~~~~S~~G~~~---- 195 (284)
T 1sh7_A 182 --------------------------------------------------------------SDSRSSFSNWGSCV---- 195 (284)
T ss_dssp --------------------------------------------------------------TSBBCTTCCBSTTC----
T ss_pred --------------------------------------------------------------CCCcCcccCCCCcc----
Confidence 12678999999975
Q ss_pred cccCeeeeCCCceeecccCCCCCCCCCCCccccceeeeccccchhhhhHHHHHHHHhhCCCCCHHHHHHHHHhcccccC
Q 044578 509 ILKPDIVAPGVNILAAWSGETGPSSLPADHRRVKFNILSGTSMSCPHVSGIAALLKARHPEWSPAAIKSALMTTAYVHD 587 (769)
Q Consensus 509 ~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lsp~~ik~~L~~TA~~~~ 587 (769)
||+|||++|+++++.+ .|..++|||||||||||++|||+|++|+|+++|||++|++||++..
T Consensus 196 ----di~ApG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~ 257 (284)
T 1sh7_A 196 ----DLFAPGSQIKSAWYDG-------------GYKTISGTSMATPHVAGVAALYLQENNGLTPLQLTGLLNSRASENK 257 (284)
T ss_dssp ----CEEEECSSEEEECTTS-------------SEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESC
T ss_pred ----EEEeccCCeEEecCCC-------------CEEEccChHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCC
Confidence 9999999999998764 7999999999999999999999999999999999999999998864
No 25
>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A
Probab=100.00 E-value=1.6e-48 Score=437.25 Aligned_cols=291 Identities=29% Similarity=0.331 Sum_probs=222.9
Q ss_pred CCccc-cCCCCCCcEEEEeccccCC------CCCCcccCCCCCCCCccccccccCCCcccccCCceeEeeEecccchhhc
Q 044578 128 TSIWS-QKVADYDVIVGVLDTGIWP------ESASFNDTGMTPVPAHWKGACETGRGFQKHHCNRKIVGARVFYRGYEAA 200 (769)
Q Consensus 128 ~~~~~-~~~~G~Gv~VgVIDtGid~------~Hp~f~~~~~~~~~~~w~g~~~~g~~~~~~~~n~ki~g~~~~~~~~~~~ 200 (769)
+.+|+ .+++|+||+|||||||||+ .||+|.++ +...++|.+.
T Consensus 11 ~~~~~~~g~~G~gv~VaViDtGvd~~~~~~~~hp~l~~~---------------------------i~~~~~~~~~---- 59 (434)
T 1wmd_A 11 DVAQSSYGLYGQGQIVAVADTGLDTGRNDSSMHEAFRGK---------------------------ITALYALGRT---- 59 (434)
T ss_dssp HHHHHHHCCSCTTCEEEEEESCCTTSCSSTTSCTTTTTC---------------------------EEEEEETTTT----
T ss_pred hhhhhccCCCCcccEEEEEecCcCCCCCCcccCcccCCC---------------------------EeeeccccCC----
Confidence 66897 7999999999999999999 79999643 3333444321
Q ss_pred cCcccccCCCCCCCCCCCChhhhhHhhccCCCCCCCccccccccceeeccCceEEEEEEeeCCCC---CHHHHHHHHHHH
Q 044578 201 TGKINEQNEYKSPRDQDGHGTHTAATVAGSPVHGANLLGYAYGTARGMSTGARIAVYKVCWSGGC---FSSDILSAVDRA 277 (769)
Q Consensus 201 ~~~~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~---~~sdi~~ai~~a 277 (769)
..+.|..||||||||||+|++.. +.||||+|+|+.+|+++..|. ..+++.++|+++
T Consensus 60 ----------~~~~d~~gHGT~VAgiiag~g~~-----------~~GvAp~a~l~~~~v~~~~g~~~~~~~~~~~ai~~a 118 (434)
T 1wmd_A 60 ----------NNANDTNGHGTHVAGSVLGNGST-----------NKGMAPQANLVFQSIMDSGGGLGGLPSNLQTLFSQA 118 (434)
T ss_dssp ----------TCCCCSSSHHHHHHHHHHCCSSS-----------SCCSSTTSEEEEEECCCTTSSCTTSCSSHHHHHHHH
T ss_pred ----------CCCCCCCCcHHHHHHHHHcCCCC-----------ceeeCCCCEEEEEEeecCCCccccccHHHHHHHHHH
Confidence 23678899999999999997421 389999999999999987663 456799999999
Q ss_pred HhCCCcEEEeccCCCCCCCccchHHHHHHHH-HhcCcEEEEecCCCCCCCC--cccCCCCceEEecCCCCCCceeeEEEe
Q 044578 278 VADGVNVLSISLGGGVSSYHRDSLSIATFGA-MEMGVFVSCSAGNGGPDPV--SLTNVSPWITTVGASTLDRDFPATVKL 354 (769)
Q Consensus 278 ~~~g~dVIn~SlG~~~~~~~~~~~~~~~~~a-~~~Gi~vV~AAGN~G~~~~--~~~~~~p~vitVgA~~~~~~~~~~~~~ 354 (769)
+++|++|||||||......+ +....++.++ .++|+++|+||||+|.... ..++.++++|+|||++..+...
T Consensus 119 ~~~g~~Vin~S~G~~~~~~~-~~~~~~id~~~~~~gvlvV~AAGN~g~~~~~~~~Pa~~~~vitVga~~~~~~~~----- 192 (434)
T 1wmd_A 119 YSAGARIHTNSWGAAVNGAY-TTDSRNVDDYVRKNDMTILFAAGNEGPNGGTISAPGTAKNAITVGATENLRPSF----- 192 (434)
T ss_dssp HHTTCSEEEECCCBCCTTCC-CHHHHHHHHHHHHSSCEEEEECCSCTTSSSCCCBSTTCSSSEEEEEECCSCGGG-----
T ss_pred HhcCCeEEEecCCCCcCCcC-CHHHHHHHHHHhCCCeEEEEECCCCCCCCcccCCcccCCccEEEecccccCccc-----
Confidence 99999999999998652222 2334444444 5899999999999997643 5567889999999854321100
Q ss_pred CCCcEEEEEEeccCCcCCCCCccccEEEecCCCCCCCCcccCCCCCCCCccceEEEEeCCCCchhhhhHHHhhcCceEEE
Q 044578 355 GTGRTITGVSLYKGRRALLPNKQYPVVYMGSNSSNSSSLCLEGTLNPTTVAGKIVICDRGISPRVQKGQVVKDAGGIGVI 434 (769)
Q Consensus 355 ~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~~~~~~~~Ga~g~i 434 (769)
+.
T Consensus 193 -------------~~----------------------------------------------------------------- 194 (434)
T 1wmd_A 193 -------------GS----------------------------------------------------------------- 194 (434)
T ss_dssp -------------CG-----------------------------------------------------------------
T ss_pred -------------Cc-----------------------------------------------------------------
Confidence 00
Q ss_pred EecCCCCCccccccccccceEEEChhhhHHHHHHHhcCCCceEEEEecceeecccCCCeeccccCCCCCCCCCCcccCee
Q 044578 435 LANTAANGEELVADCHLLPAVAVGEIEGKEIKQYASTSPKATASLALLGTRVGIKPSPVVAAFSSRGPNFLTLEILKPDI 514 (769)
Q Consensus 435 ~~n~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI 514 (769)
+ ....+.++.||++||+. ++++||||
T Consensus 195 -~---------------------------------------------------~~~~~~~a~fS~~G~~~--~g~~kpdi 220 (434)
T 1wmd_A 195 -Y---------------------------------------------------ADNINHVAQFSSRGPTK--DGRIKPDV 220 (434)
T ss_dssp -G---------------------------------------------------GSCTTSBCTTSCCCCCT--TSCCCCCE
T ss_pred -c---------------------------------------------------cCCCCccccccCCCCCC--CCCCCceE
Confidence 0 01234789999999998 68999999
Q ss_pred eeCCCceeecccCCCCCCCCCCCccccceeeeccccchhhhhHHHHHHHHhhCCCC-----CHHHHHHHHHhcccccCCC
Q 044578 515 VAPGVNILAAWSGETGPSSLPADHRRVKFNILSGTSMSCPHVSGIAALLKARHPEW-----SPAAIKSALMTTAYVHDNT 589 (769)
Q Consensus 515 ~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~l-----sp~~ik~~L~~TA~~~~~~ 589 (769)
+|||++|+++.+........ .......|..++|||||||||||++|||+|++|++ ++++||++|++||+++.
T Consensus 221 ~ApG~~i~s~~~~~~~~~~~-~~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~s~~~vk~~L~~tA~~~~-- 297 (434)
T 1wmd_A 221 MAPGTFILSARSSLAPDSSF-WANHDSKYAYMGGTSMATPIVAGNVAQLREHFVKNRGITPKPSLLKAALIAGAADIG-- 297 (434)
T ss_dssp EEECSSEEEECCTTCCGGGS-SEEEETTEEEECSHHHHHHHHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHCBCCS--
T ss_pred EcCCCCeEecCCCCCCCccc-ccCCCCceEeecchhHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHcCCcccC--
Confidence 99999999998653210000 00113479999999999999999999999998875 89999999999998752
Q ss_pred CCCCCCCCCCCCCCCCCCCCcccCccccCCCC
Q 044578 590 HNPLKDASSYEPSSPYDHGAGHINPVKALDPG 621 (769)
Q Consensus 590 g~~~~~~~~~~~~~~~~~G~G~vd~~~Al~~~ 621 (769)
..++.+.||||++|+.+|++..
T Consensus 298 ----------~~~~~~~~G~G~vd~~~a~~~~ 319 (434)
T 1wmd_A 298 ----------LGYPNGNQGWGRVTLDKSLNVA 319 (434)
T ss_dssp ----------SCSSCTTTTTCBCCHHHHHTCE
T ss_pred ----------CCCCCccCCcCeEeHHHhcccc
Confidence 1345569999999999999754
No 26
>2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ...
Probab=100.00 E-value=1.5e-48 Score=410.42 Aligned_cols=242 Identities=34% Similarity=0.442 Sum_probs=202.8
Q ss_pred CCcccCcCCCCCCC------ccccCCCCCCcEEEEeccccCCCCCCcccCCCCCCCCccccccccCCCcccccCCceeEe
Q 044578 116 SPLFLGLEPADSTS------IWSQKVADYDVIVGVLDTGIWPESASFNDTGMTPVPAHWKGACETGRGFQKHHCNRKIVG 189 (769)
Q Consensus 116 s~~~~g~~~~~~~~------~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~~~~~~~n~ki~g 189 (769)
....|++.++.++. .|+ ..+|+||+|+|||||||++||+|.++ +..
T Consensus 4 ~~~~W~l~~i~~~~~~~~~~~~~-~~~G~gv~VaViDsGvd~~H~~l~~~---------------------------~~~ 55 (279)
T 2pwa_A 4 TNAPWGLARISSTSPGTSTYYYD-ESAGQGSCVYVIDTGIEASHPEFEGR---------------------------AQM 55 (279)
T ss_dssp TTCCHHHHHHTCSSTTCCCEECC-TTTTTTEEEEEEESCCCTTCGGGTTC---------------------------EEE
T ss_pred CCCCcChhhcCCCCccccccccc-CCCCCCCEEEEEeCCCCCCChhHhCc---------------------------ccc
Confidence 44567776665443 444 37899999999999999999999753 233
Q ss_pred eEecccchhhccCcccccCCCCCCCCCCCChhhhhHhhccCCCCCCCccccccccceeeccCceEEEEEEeeCCC-CCHH
Q 044578 190 ARVFYRGYEAATGKINEQNEYKSPRDQDGHGTHTAATVAGSPVHGANLLGYAYGTARGMSTGARIAVYKVCWSGG-CFSS 268 (769)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~s 268 (769)
.++|.+ .+.|..||||||||||+|+. .||||+|+|+.+|++++.+ +..+
T Consensus 56 ~~~~~~----------------~~~d~~gHGT~vAgiia~~~--------------~GvAp~a~i~~~~v~~~~g~~~~~ 105 (279)
T 2pwa_A 56 VKTYYY----------------SSRDGNGHGTHCAGTVGSRT--------------YGVAKKTQLFGVKVLDDNGSGQYS 105 (279)
T ss_dssp EEESSS----------------CSSCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHH
T ss_pred ccCCCC----------------CCCCCCCCHHHHHHHHHhcc--------------cccCCCCEEEEEEeEcCCCCcCHH
Confidence 344431 25678999999999999872 7999999999999999877 7889
Q ss_pred HHHHHHHHHHhCCC-------cEEEeccCCCCCCCccchHHHHHHHHHhcCcEEEEecCCCCCCCC-cccCCCCceEEec
Q 044578 269 DILSAVDRAVADGV-------NVLSISLGGGVSSYHRDSLSIATFGAMEMGVFVSCSAGNGGPDPV-SLTNVSPWITTVG 340 (769)
Q Consensus 269 di~~ai~~a~~~g~-------dVIn~SlG~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~~p~vitVg 340 (769)
++++||+|++++++ +|||||||... .+.+..++.++.++|++||+||||+|.... .++...|++|+||
T Consensus 106 ~~~~ai~~a~~~~~~~~~~~~~Vin~S~G~~~----~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vg 181 (279)
T 2pwa_A 106 TIIAGMDFVASDKNNRNCPKGVVASLSLGGGY----SSSVNSAAARLQSSGVMVAVAAGNNNADARNYSPASEPSVCTVG 181 (279)
T ss_dssp HHHHHHHHHHHHGGGSCCTTEEEEEECCCEEC----CHHHHHHHHHHHHTTEEEEEECCSSSSBGGGEETTTCTTSEEEE
T ss_pred HHHHHHHHHHhcCccccCCCccEEEecCCCCC----CHHHHHHHHHHHHCCCEEEEECCCCCCcCCCcCcccCCcEEEEE
Confidence 99999999999887 99999999753 356777777889999999999999997653 4577889999999
Q ss_pred CCCCCCceeeEEEeCCCcEEEEEEeccCCcCCCCCccccEEEecCCCCCCCCcccCCCCCCCCccceEEEEeCCCCchhh
Q 044578 341 ASTLDRDFPATVKLGTGRTITGVSLYKGRRALLPNKQYPVVYMGSNSSNSSSLCLEGTLNPTTVAGKIVICDRGISPRVQ 420 (769)
Q Consensus 341 A~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~ 420 (769)
|.+.
T Consensus 182 a~~~---------------------------------------------------------------------------- 185 (279)
T 2pwa_A 182 ASDR---------------------------------------------------------------------------- 185 (279)
T ss_dssp EECT----------------------------------------------------------------------------
T ss_pred EecC----------------------------------------------------------------------------
Confidence 7321
Q ss_pred hhHHHhhcCceEEEEecCCCCCccccccccccceEEEChhhhHHHHHHHhcCCCceEEEEecceeecccCCCeeccccCC
Q 044578 421 KGQVVKDAGGIGVILANTAANGEELVADCHLLPAVAVGEIEGKEIKQYASTSPKATASLALLGTRVGIKPSPVVAAFSSR 500 (769)
Q Consensus 421 ~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fSS~ 500 (769)
.+.++.||++
T Consensus 186 ----------------------------------------------------------------------~~~~~~~S~~ 195 (279)
T 2pwa_A 186 ----------------------------------------------------------------------YDRRSSFSNY 195 (279)
T ss_dssp ----------------------------------------------------------------------TSBBCTTCCB
T ss_pred ----------------------------------------------------------------------CCCcCCcCCC
Confidence 1267899999
Q ss_pred CCCCCCCCcccCeeeeCCCceeecccCCCCCCCCCCCccccceeeeccccchhhhhHHHHHHHHhhCCCCCHHHHHHHHH
Q 044578 501 GPNFLTLEILKPDIVAPGVNILAAWSGETGPSSLPADHRRVKFNILSGTSMSCPHVSGIAALLKARHPEWSPAAIKSALM 580 (769)
Q Consensus 501 GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lsp~~ik~~L~ 580 (769)
||.+ ||+|||++|+++++.+ .|..++|||||||||||++|||+|+ |+++|.+||++|+
T Consensus 196 G~~~--------di~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~VaG~aAll~~~-p~lt~~~v~~~L~ 253 (279)
T 2pwa_A 196 GSVL--------DIFGPGTDILSTWIGG-------------STRSISGTSMATPHVAGLAAYLMTL-GKTTAASACRYIA 253 (279)
T ss_dssp STTC--------CEEEECSSEEEEETTT-------------EEEEECSHHHHHHHHHHHHHHHHHT-TSCCTTTHHHHHH
T ss_pred CCcc--------eEEEecCCeEEeecCC-------------CEEEcCChHHHHHHHHHHHHHHHhC-CCCCHHHHHHHHH
Confidence 9965 9999999999998865 7999999999999999999999999 9999999999999
Q ss_pred hcccccC
Q 044578 581 TTAYVHD 587 (769)
Q Consensus 581 ~TA~~~~ 587 (769)
+||++..
T Consensus 254 ~tA~~~~ 260 (279)
T 2pwa_A 254 DTANKGD 260 (279)
T ss_dssp HHSEESC
T ss_pred HhCcccc
Confidence 9998763
No 27
>2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP}
Probab=100.00 E-value=9.1e-48 Score=405.09 Aligned_cols=247 Identities=28% Similarity=0.422 Sum_probs=204.4
Q ss_pred cccCcCCCCC-----CCccccCCCCCCcEEEEeccccCCCCCCcccCCCCCCCCccccccccCCCcccccCCceeEeeEe
Q 044578 118 LFLGLEPADS-----TSIWSQKVADYDVIVGVLDTGIWPESASFNDTGMTPVPAHWKGACETGRGFQKHHCNRKIVGARV 192 (769)
Q Consensus 118 ~~~g~~~~~~-----~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~~~~~~~n~ki~g~~~ 192 (769)
..|+++++.+ ..+|..+++|+||+|+|||||||++||+|.++ +...++
T Consensus 6 ~~W~l~~i~~~~~~~~~~~~~~~~G~gv~VaViDtGid~~Hpdl~~~---------------------------~~~~~d 58 (278)
T 2b6n_A 6 PTWGIDRIDQRNLPLDNNYHTDYDGSGVTAFVIDTGVLNTHNEFGGR---------------------------ASSGYD 58 (278)
T ss_dssp CCHHHHHHTCSSSSCCSEEECSCCCTTCEEEEEESCCCTTCGGGTTC---------------------------EEEEEE
T ss_pred CCCCccccCCccCCcchhcccCCCCCCCEEEEEeCCCCCCChhHhcc---------------------------cccCee
Confidence 3455554432 45799999999999999999999999999753 233344
Q ss_pred cccchhhccCcccccCCCCCCCCCCCChhhhhHhhccCCCCCCCccccccccceeeccCceEEEEEEeeCCC-CCHHHHH
Q 044578 193 FYRGYEAATGKINEQNEYKSPRDQDGHGTHTAATVAGSPVHGANLLGYAYGTARGMSTGARIAVYKVCWSGG-CFSSDIL 271 (769)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~sdi~ 271 (769)
|.++ ..++.|..||||||||||+|.. .||||+|+|+.+|++++.+ +..++++
T Consensus 59 ~~~~-------------~~~~~d~~gHGT~vAgiia~~~--------------~GvAp~a~i~~~~v~~~~g~~~~~~~~ 111 (278)
T 2b6n_A 59 FIDN-------------DYDATDCNGHGTHVAGTIGGST--------------YGVAKNVNVVGVRVLNCSGSGSNSGVI 111 (278)
T ss_dssp TTTT-------------BSCCCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHH
T ss_pred cCCC-------------CCCCCCCCCcHHHHHHHHHCCC--------------cCCCCCCeEEEEEEECCCCCccHHHHH
Confidence 4432 1236788999999999999873 7999999999999998876 7888999
Q ss_pred HHHHHHHh--CCCcEEEeccCCCCCCCccchHHHHHHHHHhcCcEEEEecCCCCCCCC-cccCCCCceEEecCCCCCCce
Q 044578 272 SAVDRAVA--DGVNVLSISLGGGVSSYHRDSLSIATFGAMEMGVFVSCSAGNGGPDPV-SLTNVSPWITTVGASTLDRDF 348 (769)
Q Consensus 272 ~ai~~a~~--~g~dVIn~SlG~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~~p~vitVgA~~~~~~~ 348 (769)
+||+|+++ .+++|||||||... .+.+..++.++.++|++||+||||+|.... ..+...+++|+|||.+.
T Consensus 112 ~ai~~a~~~~~g~~Vin~S~G~~~----~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~---- 183 (278)
T 2b6n_A 112 AGINWVKNNASGPAVANMSLGGGA----SQATDDAVNAAVAAGITFVVAAGNDNSNACNYSPARAADAITVGSTTS---- 183 (278)
T ss_dssp HHHHHHHHHCCSSEEEEECCCEEC----CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECT----
T ss_pred HHHHHHHhCCCCCeEEEECCCCCc----CHHHHHHHHHHHHCCCEEEEEeCCCCCCCCCcCcccCCCeEEEEeeCC----
Confidence 99999998 58999999999854 356667777888999999999999997654 35777899999997321
Q ss_pred eeEEEeCCCcEEEEEEeccCCcCCCCCccccEEEecCCCCCCCCcccCCCCCCCCccceEEEEeCCCCchhhhhHHHhhc
Q 044578 349 PATVKLGTGRTITGVSLYKGRRALLPNKQYPVVYMGSNSSNSSSLCLEGTLNPTTVAGKIVICDRGISPRVQKGQVVKDA 428 (769)
Q Consensus 349 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~~~~~~~~ 428 (769)
T Consensus 184 -------------------------------------------------------------------------------- 183 (278)
T 2b6n_A 184 -------------------------------------------------------------------------------- 183 (278)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CceEEEEecCCCCCccccccccccceEEEChhhhHHHHHHHhcCCCceEEEEecceeecccCCCeeccccCCCCCCCCCC
Q 044578 429 GGIGVILANTAANGEELVADCHLLPAVAVGEIEGKEIKQYASTSPKATASLALLGTRVGIKPSPVVAAFSSRGPNFLTLE 508 (769)
Q Consensus 429 Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fSS~GP~~~~~~ 508 (769)
.+.++.||++||..
T Consensus 184 --------------------------------------------------------------~~~~~~~S~~G~~~---- 197 (278)
T 2b6n_A 184 --------------------------------------------------------------NDSRSSFSNYGTCL---- 197 (278)
T ss_dssp --------------------------------------------------------------TSBBCTTCCBSTTC----
T ss_pred --------------------------------------------------------------CCCcCCcCCCCCCC----
Confidence 12678899999855
Q ss_pred cccCeeeeCCCceeecccCCCCCCCCCCCccccceeeeccccchhhhhHHHHHHHHhhCCCCCHHHHHHHHHhcccccC
Q 044578 509 ILKPDIVAPGVNILAAWSGETGPSSLPADHRRVKFNILSGTSMSCPHVSGIAALLKARHPEWSPAAIKSALMTTAYVHD 587 (769)
Q Consensus 509 ~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lsp~~ik~~L~~TA~~~~ 587 (769)
||+|||++|+++++... ..|..++|||||||||||++|||+|++|+|++.|||++|++||++..
T Consensus 198 ----di~ApG~~i~s~~~~~~-----------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~ 261 (278)
T 2b6n_A 198 ----DIYAPGSSITSSWYTSN-----------SATNTISGTSMASPHVAGVAALYLDENPNLSPAQVTNLLKTRATADK 261 (278)
T ss_dssp ----CEEEECSSEEEECTTST-----------TCEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESC
T ss_pred ----eEEeCCCCeECcccCCC-----------CCEEEeCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCC
Confidence 99999999999886532 27999999999999999999999999999999999999999998753
No 28
>4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus}
Probab=100.00 E-value=1.1e-47 Score=404.49 Aligned_cols=248 Identities=31% Similarity=0.439 Sum_probs=206.5
Q ss_pred CCcccCcCCCC-----CCCccccCCCCCCcEEEEeccccCCCCCCcccCCCCCCCCccccccccCCCcccccCCceeEee
Q 044578 116 SPLFLGLEPAD-----STSIWSQKVADYDVIVGVLDTGIWPESASFNDTGMTPVPAHWKGACETGRGFQKHHCNRKIVGA 190 (769)
Q Consensus 116 s~~~~g~~~~~-----~~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~~~~~~~n~ki~g~ 190 (769)
.+..|++.++. ...+|..+.+|+||+|||||||||++||+|.++ +...
T Consensus 4 ~~~~W~l~~i~~~~~~~~~a~~~~~~G~gv~VaViDtGvd~~h~~l~~~---------------------------~~~~ 56 (276)
T 4dzt_A 4 SPAPWGLDRIDQRDLPLSNSYTYTATGRGVNVYVIDTGIRTTHREFGGR---------------------------ARVG 56 (276)
T ss_dssp SSCCHHHHHHTSSSSSCCSCEECSCCCTTCEEEEEESCCCTTCGGGTTC---------------------------EEEE
T ss_pred CCCCCChhhcCCccCCcccceecCCCCCCcEEEEEccCCCCCChhHccC---------------------------eecc
Confidence 34455554432 256899999999999999999999999999753 2333
Q ss_pred EecccchhhccCcccccCCCCCCCCCCCChhhhhHhhccCCCCCCCccccccccceeeccCceEEEEEEeeCCC-CCHHH
Q 044578 191 RVFYRGYEAATGKINEQNEYKSPRDQDGHGTHTAATVAGSPVHGANLLGYAYGTARGMSTGARIAVYKVCWSGG-CFSSD 269 (769)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~sd 269 (769)
++|.. ..+.|..||||||||||+|.. .||||+|+|+.+|++++.+ +..++
T Consensus 57 ~~~~~---------------~~~~d~~gHGT~vAgiiag~~--------------~GvAp~a~l~~~~v~~~~~~~~~~~ 107 (276)
T 4dzt_A 57 YDALG---------------GNGQDCNGHGTHVAGTIGGVT--------------YGVAKAVNLYAVRVLDCNGSGSTSG 107 (276)
T ss_dssp EETTS---------------SCSCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHH
T ss_pred ccCCC---------------CCCCCCCCCHHHHHHHHHccc--------------cCCCCCCEEEEEEEeCCCCCcCHHH
Confidence 33332 135678999999999999873 7999999999999998877 78889
Q ss_pred HHHHHHHHHhC--CCcEEEeccCCCCCCCccchHHHHHHHHHhcCcEEEEecCCCCCCCCc-ccCCCCceEEecCCCCCC
Q 044578 270 ILSAVDRAVAD--GVNVLSISLGGGVSSYHRDSLSIATFGAMEMGVFVSCSAGNGGPDPVS-LTNVSPWITTVGASTLDR 346 (769)
Q Consensus 270 i~~ai~~a~~~--g~dVIn~SlG~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~G~~~~~-~~~~~p~vitVgA~~~~~ 346 (769)
++++++|++++ +++|||||||... ...+..++.++.++|+++|+||||+|..... .+...+++|+|||.+
T Consensus 108 ~~~ai~~~~~~~~~~~vin~S~g~~~----~~~~~~a~~~a~~~gvlvv~AAGN~g~~~~~~~Pa~~~~vi~Vga~~--- 180 (276)
T 4dzt_A 108 VIAGVDWVTRNHRRPAVANMSLGGGV----STALDNAVKNSIAAGVVYAVAAGNDNANACNYSPARVAEALTVGATT--- 180 (276)
T ss_dssp HHHHHHHHHHHCCSSEEEEECCCEEC----CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEEC---
T ss_pred HHHHHHHHHhcCCCCeEEEECCCCCC----CHHHHHHHHHHHhCCCEEEEECCCCCCCCCCcCcccCCCEEEEEEEC---
Confidence 99999999987 8999999999754 3567777778999999999999999976543 377788999999732
Q ss_pred ceeeEEEeCCCcEEEEEEeccCCcCCCCCccccEEEecCCCCCCCCcccCCCCCCCCccceEEEEeCCCCchhhhhHHHh
Q 044578 347 DFPATVKLGTGRTITGVSLYKGRRALLPNKQYPVVYMGSNSSNSSSLCLEGTLNPTTVAGKIVICDRGISPRVQKGQVVK 426 (769)
Q Consensus 347 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~~~~~~ 426 (769)
T Consensus 181 -------------------------------------------------------------------------------- 180 (276)
T 4dzt_A 181 -------------------------------------------------------------------------------- 180 (276)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hcCceEEEEecCCCCCccccccccccceEEEChhhhHHHHHHHhcCCCceEEEEecceeecccCCCeeccccCCCCCCCC
Q 044578 427 DAGGIGVILANTAANGEELVADCHLLPAVAVGEIEGKEIKQYASTSPKATASLALLGTRVGIKPSPVVAAFSSRGPNFLT 506 (769)
Q Consensus 427 ~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fSS~GP~~~~ 506 (769)
..+.++.||++||..
T Consensus 181 ---------------------------------------------------------------~~~~~~~~S~~g~~~-- 195 (276)
T 4dzt_A 181 ---------------------------------------------------------------SSDARASFSNYGSCV-- 195 (276)
T ss_dssp ---------------------------------------------------------------TTSBBCTTCCBSTTC--
T ss_pred ---------------------------------------------------------------CCCCcCCcCCCCCCc--
Confidence 123678999999976
Q ss_pred CCcccCeeeeCCCceeecccCCCCCCCCCCCccccceeeeccccchhhhhHHHHHHHHhhCCCCCHHHHHHHHHhccccc
Q 044578 507 LEILKPDIVAPGVNILAAWSGETGPSSLPADHRRVKFNILSGTSMSCPHVSGIAALLKARHPEWSPAAIKSALMTTAYVH 586 (769)
Q Consensus 507 ~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lsp~~ik~~L~~TA~~~ 586 (769)
||+|||++|.++++... ..|..++|||||||+|||++|||+|++|+|++++||++|++||++.
T Consensus 196 ------dv~ApG~~i~s~~~~~~-----------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~ 258 (276)
T 4dzt_A 196 ------DLFAPGASIPSAWYTSD-----------TATQTLNGTSMATPHVAGVAALYLEQNPSATPASVASAILNGATTG 258 (276)
T ss_dssp ------CEEEECSSEEEECTTSS-----------SCEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEES
T ss_pred ------eEEeCCCCeEccccCCC-----------CceEEeeEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCcCC
Confidence 99999999999987642 2799999999999999999999999999999999999999999987
Q ss_pred CC
Q 044578 587 DN 588 (769)
Q Consensus 587 ~~ 588 (769)
..
T Consensus 259 ~~ 260 (276)
T 4dzt_A 259 RL 260 (276)
T ss_dssp CC
T ss_pred cc
Confidence 43
No 29
>2oxa_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria} PDB: 3hjr_A
Probab=100.00 E-value=1.5e-46 Score=437.16 Aligned_cols=299 Identities=21% Similarity=0.198 Sum_probs=203.1
Q ss_pred CCCccccCCCCCCcEEEEeccccCCCCCCcccCCCCCCCCccccccccCCCcccccCCceeEeeEecccchhhccCcccc
Q 044578 127 STSIWSQKVADYDVIVGVLDTGIWPESASFNDTGMTPVPAHWKGACETGRGFQKHHCNRKIVGARVFYRGYEAATGKINE 206 (769)
Q Consensus 127 ~~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~ 206 (769)
...+|..+++|+||+|||||||||++||+|.++- +.+.++|..+.
T Consensus 59 ~~~aw~~g~~G~gV~VaViDtGid~~Hpdl~~~~--------------------------~~~~~~~~~~~--------- 103 (600)
T 2oxa_A 59 LWWAHRTGVLGHGVNVAVVDDGLAIAHPDLADNV--------------------------RPGSKNVVTGS--------- 103 (600)
T ss_dssp CHHHHHTTCSCTTCEEEEESSCCCTTCTTTGGGB--------------------------CSCCBCTTTCS---------
T ss_pred hHHHHhcCCCCCCcEEEEecCCcCCCCcchhhcc--------------------------ccCceeccCCC---------
Confidence 3678999999999999999999999999997531 11122333221
Q ss_pred cCCCCCCCC-CCCChhhhhHhhccCCCCCCCccccccccceeeccCceEEEEEEeeCCCCCH--HHHHHHHHHHHhCCCc
Q 044578 207 QNEYKSPRD-QDGHGTHTAATVAGSPVHGANLLGYAYGTARGMSTGARIAVYKVCWSGGCFS--SDILSAVDRAVADGVN 283 (769)
Q Consensus 207 ~~~~~~~~D-~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~--sdi~~ai~~a~~~g~d 283 (769)
....|.| ..||||||||||||. .++.+ +.||||+|+|+.+|+++..+... ..+++....+..++++
T Consensus 104 --~d~~p~d~~~gHGT~vAGiiaa~-~n~~g--------~~GVAp~A~l~~vkv~~~~~~~~~~~~~~~~~~~a~~~~~~ 172 (600)
T 2oxa_A 104 --DDPTPTDPDTGHGTSVSGIIAAV-DNAIG--------TKGIAPRAQLQGFNLLDDNSQQLQKDWLYALGDSNASRDNR 172 (600)
T ss_dssp --SCCCCCSTTCCHHHHHHHHHHCC-SSSSS--------CCCSSTTCEEEEECTTSTTCCCCHHHHHHHTTTSHHHHTCS
T ss_pred --CCCCCCCCCCCCccHHHHHhhcc-cCCCc--------ceEEccCCceEEEeeecCcccchHHHHHHHHhhhhcccCCe
Confidence 0112444 789999999999998 33322 38999999999999998776332 3344444447778999
Q ss_pred EEEeccCCCCC-CCcc----chHHHHHHH---HHhcCcEEEEecCCCCCCCCc----------------------ccCCC
Q 044578 284 VLSISLGGGVS-SYHR----DSLSIATFG---AMEMGVFVSCSAGNGGPDPVS----------------------LTNVS 333 (769)
Q Consensus 284 VIn~SlG~~~~-~~~~----~~~~~~~~~---a~~~Gi~vV~AAGN~G~~~~~----------------------~~~~~ 333 (769)
|||||||.... .... ..+..++.. +.++|++||+||||+|..... .++.+
T Consensus 173 Vin~S~G~~~~~~~~~~~~~~~~~~~~~~~~~a~~~GilvV~AAGN~g~~~~~~~~~~~Pa~~~~~~p~~~~n~~~~~~s 252 (600)
T 2oxa_A 173 VFNHSYRMSVVDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGGYVLNRTGNGPKLPFENSNLDPSNSN 252 (600)
T ss_dssp EEEECCCCCCSSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEETTEEEEEESCSSCCCSSBTTSSGGGGS
T ss_pred EEEEeccCCCCCccccCchhHHHHHHHHHHHHhccCCcEEEEecCCCCccCCCCcceecCccccccccccccccCCcccC
Confidence 99999998642 1111 222222222 457899999999999864210 01122
Q ss_pred CceEEecCCCCCCceeeEEEeCCCcEEEEEEeccCCcCCCCCccccEEEecCCCCCCCCcccCCCCCCCCccceEEEEeC
Q 044578 334 PWITTVGASTLDRDFPATVKLGTGRTITGVSLYKGRRALLPNKQYPVVYMGSNSSNSSSLCLEGTLNPTTVAGKIVICDR 413 (769)
Q Consensus 334 p~vitVgA~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~ 413 (769)
+|+|+|||.
T Consensus 253 ~~vItVgA~----------------------------------------------------------------------- 261 (600)
T 2oxa_A 253 FWNLVVSAL----------------------------------------------------------------------- 261 (600)
T ss_dssp SSEEEEEEE-----------------------------------------------------------------------
T ss_pred ceeEEEecc-----------------------------------------------------------------------
Confidence 334444431
Q ss_pred CCCchhhhhHHHhhcCceEEEEecCCCCCccccccccccceEEEChhhhHHHHHHHhcCCCceEEEEecceeecccCCCe
Q 044578 414 GISPRVQKGQVVKDAGGIGVILANTAANGEELVADCHLLPAVAVGEIEGKEIKQYASTSPKATASLALLGTRVGIKPSPV 493 (769)
Q Consensus 414 g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (769)
...+.
T Consensus 262 ---------------------------------------------------------------------------~~~g~ 266 (600)
T 2oxa_A 262 ---------------------------------------------------------------------------NADGV 266 (600)
T ss_dssp ---------------------------------------------------------------------------CTTSS
T ss_pred ---------------------------------------------------------------------------cCCCC
Confidence 22347
Q ss_pred eccccCCCCCCCCCCcccCeeeeCCCceeecccC-------CCC--CC------------CCCCCccccceeeeccccch
Q 044578 494 VAAFSSRGPNFLTLEILKPDIVAPGVNILAAWSG-------ETG--PS------------SLPADHRRVKFNILSGTSMS 552 (769)
Q Consensus 494 ~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa~~~-------~~~--~~------------~~~~~~~~~~y~~~sGTSmA 552 (769)
++.||++||+. ||+|||++|.+..+. ... .. ....+.....|..++|||||
T Consensus 267 ~a~fS~~G~~v--------dv~APG~~i~~~~p~i~ttd~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~sGTS~A 338 (600)
T 2oxa_A 267 RSSYSSVGSNI--------FLSATGGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGVMNGTSSA 338 (600)
T ss_dssp BCTTCCBCTTE--------EEEEECCSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEEECSHHHH
T ss_pred cCCcCCCCCCe--------EEEeccCCCCcCCCceEeccccccccccccccccccccccccccccCCcccccccccchHH
Confidence 89999999987 999999996554332 100 00 00001112348999999999
Q ss_pred hhhhHHHHHHHHhhCCCCCHHHHHHHHHhcccccCCCCCCCC-------------------CCCCCCCCCCCCCCCcccC
Q 044578 553 CPHVSGIAALLKARHPEWSPAAIKSALMTTAYVHDNTHNPLK-------------------DASSYEPSSPYDHGAGHIN 613 (769)
Q Consensus 553 aP~VAG~aALl~q~~p~lsp~~ik~~L~~TA~~~~~~g~~~~-------------------~~~~~~~~~~~~~G~G~vd 613 (769)
||||||++|||+|++|+|+|++||++|++||++++..+.+.. ............||||+||
T Consensus 339 aP~VAGvaALl~s~~P~lt~~~vk~~L~~tA~~~~~~~~~~~~~~~~~~G~~~~~~~~~~w~~n~~g~~~~~~~G~G~vd 418 (600)
T 2oxa_A 339 TPSTSGAMALLMSAYPDLSVRDLRDLLARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNAAGMWFSPTYGFGLID 418 (600)
T ss_dssp HHHHHHHHHHHHHHSTTSCHHHHHHHHHHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECTTSCEEBTTTBTCBCC
T ss_pred hHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCCcccccccccccccccccccccccccccccCCCccccccCCCchhh
Confidence 999999999999999999999999999999999865432210 0001122234689999999
Q ss_pred ccccCCCCceec
Q 044578 614 PVKALDPGLIYD 625 (769)
Q Consensus 614 ~~~Al~~~lv~d 625 (769)
+.+|++.+..+.
T Consensus 419 a~~Av~~A~~~~ 430 (600)
T 2oxa_A 419 VNKALELAANHQ 430 (600)
T ss_dssp HHHHHHHHTTCC
T ss_pred HHHHHHHHHhcc
Confidence 999998655443
No 30
>1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1
Probab=100.00 E-value=5.8e-47 Score=428.13 Aligned_cols=302 Identities=17% Similarity=0.142 Sum_probs=221.9
Q ss_pred CcccCcCC-----CCCCCccccCCCCCCcEEEEeccccCCCCCCcccCCCCCCCCccccccccCCCcccccCCceeEeeE
Q 044578 117 PLFLGLEP-----ADSTSIWSQKVADYDVIVGVLDTGIWPESASFNDTGMTPVPAHWKGACETGRGFQKHHCNRKIVGAR 191 (769)
Q Consensus 117 ~~~~g~~~-----~~~~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~~~~~~~n~ki~g~~ 191 (769)
..+|++.+ ++...+|+.+++|+||+|||||||||++||+|.++-. . ...+
T Consensus 12 ~~qW~l~~~~~~~i~~~~aw~~g~~G~gv~VaViDtGvd~~Hpdl~~~~~------------~-------------~~~~ 66 (471)
T 1p8j_A 12 PQQWYLSGVTQRDLNVKEAWAQGFTGHGIVVSILDDGIEKNHPDLAGNYD------------P-------------GASF 66 (471)
T ss_dssp GGCTTTSCTTSCSCCCHHHHHTTCSCTTCEEEEEEBCCCTTCTTTGGGBC------------G-------------GGCE
T ss_pred hhCcCCCCCCccCCChHHHHhcCCCCCCCEEEEEeCCcCCCChhHhhccC------------c-------------cCcc
Confidence 34677765 5558899999999999999999999999999975300 0 0112
Q ss_pred ecccchhhccCcccccCCCCCCCCCCCChhhhhHhhccCCCCCCCccccccccceeeccCceEEEEEEeeCCCCCHHHHH
Q 044578 192 VFYRGYEAATGKINEQNEYKSPRDQDGHGTHTAATVAGSPVHGANLLGYAYGTARGMSTGARIAVYKVCWSGGCFSSDIL 271 (769)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~sdi~ 271 (769)
+|.++. ..+.+...+.|..+|||||||||||...++.+ +.||||+|+|+.+|+++ +..++++
T Consensus 67 d~~~~~-------~~p~~~~~~~d~~gHGT~vAGiiaa~~~n~~g--------~~GvAp~a~i~~~rv~~---g~~~~~~ 128 (471)
T 1p8j_A 67 DVNDQD-------PDPQPRYTQMNDNRHGTRCAGEVAAVANNGVC--------GVGVAYNARIGGVRMLD---GEVTDAV 128 (471)
T ss_dssp ETTTTB-------SCCCCCCCTTCTTCHHHHHHHHHHCCSSSSSS--------CCCTTTTSEEEEEECSS---SCCCHHH
T ss_pred cccCCC-------CCCCCccCCCCCCCcHHHHHHHHHeeccCCCC--------CEEECCCCeEEEEEccC---CchhHHH
Confidence 232221 01111223568899999999999998654432 38999999999999986 3467899
Q ss_pred HHHHHHHh-CCCcEEEeccCCCCCC----CccchHHHHHHHHH-----hcCcEEEEecCCCCCCCCc----ccCCCCceE
Q 044578 272 SAVDRAVA-DGVNVLSISLGGGVSS----YHRDSLSIATFGAM-----EMGVFVSCSAGNGGPDPVS----LTNVSPWIT 337 (769)
Q Consensus 272 ~ai~~a~~-~g~dVIn~SlG~~~~~----~~~~~~~~~~~~a~-----~~Gi~vV~AAGN~G~~~~~----~~~~~p~vi 337 (769)
+|++++++ ++++|||||||..... .....+..++.++. .+|++||+||||+|..... ....++++|
T Consensus 129 ~ai~~a~~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vI 208 (471)
T 1p8j_A 129 EARSLGLNPNHIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTL 208 (471)
T ss_dssp HHHHHTSCTTTCCEEEECCBSCCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCBGGGBTTTTSTTEE
T ss_pred HHHHhhhccCCCeEEEeccCcCCCCCcccCcHHHHHHHHHHHHHhhccCCCeEEEEeCCCCCCCCCCcCcCcccCCCceE
Confidence 99999999 8999999999975421 11223344444444 3699999999999875321 122457899
Q ss_pred EecCCCCCCceeeEEEeCCCcEEEEEEeccCCcCCCCCccccEEEecCCCCCCCCcccCCCCCCCCccceEEEEeCCCCc
Q 044578 338 TVGASTLDRDFPATVKLGTGRTITGVSLYKGRRALLPNKQYPVVYMGSNSSNSSSLCLEGTLNPTTVAGKIVICDRGISP 417 (769)
Q Consensus 338 tVgA~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~ 417 (769)
+|||.+.
T Consensus 209 tVgA~~~------------------------------------------------------------------------- 215 (471)
T 1p8j_A 209 SISSATQ------------------------------------------------------------------------- 215 (471)
T ss_dssp EEEEECT-------------------------------------------------------------------------
T ss_pred EEecccC-------------------------------------------------------------------------
Confidence 9997321
Q ss_pred hhhhhHHHhhcCceEEEEecCCCCCccccccccccceEEEChhhhHHHHHHHhcCCCceEEEEecceeecccCCCeeccc
Q 044578 418 RVQKGQVVKDAGGIGVILANTAANGEELVADCHLLPAVAVGEIEGKEIKQYASTSPKATASLALLGTRVGIKPSPVVAAF 497 (769)
Q Consensus 418 ~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~f 497 (769)
.+.++.|
T Consensus 216 -------------------------------------------------------------------------~g~~a~~ 222 (471)
T 1p8j_A 216 -------------------------------------------------------------------------FGNVPWY 222 (471)
T ss_dssp -------------------------------------------------------------------------TSCCCTT
T ss_pred -------------------------------------------------------------------------CCCcccc
Confidence 2367899
Q ss_pred cCCCCCCCCCCcccCeeeeCCCceeecccCCCCCCCCCCCccccceeeeccccchhhhhHHHHHHHHhhCCCCCHHHHHH
Q 044578 498 SSRGPNFLTLEILKPDIVAPGVNILAAWSGETGPSSLPADHRRVKFNILSGTSMSCPHVSGIAALLKARHPEWSPAAIKS 577 (769)
Q Consensus 498 SS~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lsp~~ik~ 577 (769)
|++||... ...+|...+||.+|+++.+.. ..|..++|||||||||||++|||+|++|+|++++||+
T Consensus 223 S~~g~~~~--~~~~~~~~~~g~~i~st~~~~------------~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~ 288 (471)
T 1p8j_A 223 SEACSSTL--ATTYSSGNQNEKQIVTTDLRQ------------KCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQH 288 (471)
T ss_dssp CCBCTTCC--EEEECCCSTTSCCEEEEETTT------------EEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHH
T ss_pred cCCCCcce--EEeCCCCCCCCCCEEEeeCCC------------CccccCCCcccccchhhhHHHHHHhhCCCCCHHHHHH
Confidence 99999873 355666667778999987643 3699999999999999999999999999999999999
Q ss_pred HHHhcccccCCCCCCCCCCCCCCCCCCCCCCCcccCccccCCCCc
Q 044578 578 ALMTTAYVHDNTHNPLKDASSYEPSSPYDHGAGHINPVKALDPGL 622 (769)
Q Consensus 578 ~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~G~G~vd~~~Al~~~l 622 (769)
+|++||++.+.....+.... ........||||+||+.+|++...
T Consensus 289 ~L~~tA~~~~~~~~~~~~n~-~g~~~~~~~G~G~vda~~Av~~a~ 332 (471)
T 1p8j_A 289 LVVQTSKPAHLNADDWATNG-VGRKVSHSYGYGLLDAGAMVALAQ 332 (471)
T ss_dssp HHHHHCBCTTCCCSCCEECT-TSCEEBTTTBTCBCCHHHHHHHHH
T ss_pred HHHhcCccCCCCCCCceecC-CCcccCCCCCCEEEcHhHHHHHhh
Confidence 99999998764432221111 111234599999999999998544
No 31
>2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A
Probab=100.00 E-value=1.5e-46 Score=419.96 Aligned_cols=289 Identities=24% Similarity=0.236 Sum_probs=207.3
Q ss_pred ccCcCCCCCCC----ccccCCCCCCcEEEEeccccCCCCCCcccCCCCCCCCccccccccCCCcccccCCceeEeeEecc
Q 044578 119 FLGLEPADSTS----IWSQKVADYDVIVGVLDTGIWPESASFNDTGMTPVPAHWKGACETGRGFQKHHCNRKIVGARVFY 194 (769)
Q Consensus 119 ~~g~~~~~~~~----~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~~~~~~~n~ki~g~~~~~ 194 (769)
.|+|+++.+.. .|..+++|+||+|+|||||||++||+|.++- ....+.+.
T Consensus 3 ~WgL~rI~~~~~~~~aw~~~~tG~GV~VaVIDTGId~~HpdL~gr~--------------------------~~~~~~~v 56 (546)
T 2qtw_B 3 PWNLERITPPRYRADEYQPPDGGSLVEVYLLDTSIQSDHREIEGRV--------------------------MVTDFENV 56 (546)
T ss_dssp CHHHHHTSCSSCC--------CCTTSEEEEEESCCCTTSTTTTTTE--------------------------EEEEEECC
T ss_pred CCChhhcCCCcccchhcccCCCCCCcEEEEECCCCCCCChHHcccc--------------------------cccCcccc
Confidence 36766665433 7888999999999999999999999997540 01111111
Q ss_pred cchhhccCcccccCCCCCCCCCCCChhhhhHhhccCCCCCCCccccccccceeeccCceEEEEEEeeCCC-CCHHHHHHH
Q 044578 195 RGYEAATGKINEQNEYKSPRDQDGHGTHTAATVAGSPVHGANLLGYAYGTARGMSTGARIAVYKVCWSGG-CFSSDILSA 273 (769)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~sdi~~a 273 (769)
... ++ ......+.|..||||||||||+|+. .||||+|+|+.+|++++.| ++.+++++|
T Consensus 57 ~~~---dg----~~f~~~~~D~~GHGThVAGIIag~~--------------~GVAP~A~L~~vkVl~~~G~g~~s~ii~a 115 (546)
T 2qtw_B 57 PEE---DG----TRFHRQASKCDSHGTHLAGVVSGRD--------------AGVAKGASMRSLRVLNCQGKGTVSGTLIG 115 (546)
T ss_dssp CCC---C-----------CTTTTHHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSEEEHHHHHHH
T ss_pred cCC---CC----ccccCCCCCCCChHHHHHHHHhccC--------------CCcCCCCEEEEEEEECCCCCcCHHHHHHH
Confidence 100 00 0001235688999999999999873 7999999999999998877 788899999
Q ss_pred HHHHHhC------CCcEEEeccCCCCCCCccchHHHHHHHHHhcCcEEEEecCCCCCCCC-cccCCCCceEEecCCCCCC
Q 044578 274 VDRAVAD------GVNVLSISLGGGVSSYHRDSLSIATFGAMEMGVFVSCSAGNGGPDPV-SLTNVSPWITTVGASTLDR 346 (769)
Q Consensus 274 i~~a~~~------g~dVIn~SlG~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~~p~vitVgA~~~~~ 346 (769)
|+|+++. +++|||||||+.. ...+..++.++.++|++||+||||+|.+.. .+++..|++|+|||++.+.
T Consensus 116 i~~a~~~~~~~~~g~~VINmSlGg~~----s~~l~~Ai~~A~~~GvlvVaAAGN~g~d~~~~sPAs~~~VItVGA~d~~g 191 (546)
T 2qtw_B 116 LEFIRKSQLVQPVGPLVVLLPLAGGY----SRVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPEVITVGATNAQD 191 (546)
T ss_dssp HHHHHHHHHHSCCSCEEEEECEEEEC----CHHHHHHHHHHHHTTCEEEEECCSBSSBGGGEETTTCTTSEEEEEECTTS
T ss_pred HHHHHHhhhhccCCCeEEEecCCCCC----cHHHHHHHHHHHhCCCEEEEECCCCCCCCCccCcccCCCEEEEEEecCCC
Confidence 9999984 8999999999753 356777777899999999999999997653 4577889999999843211
Q ss_pred ceeeEEEeCCCcEEEEEEeccCCcCCCCCccccEEEecCCCCCCCCcccCCCCCCCCccceEEEEeCCCCchhhhhHHHh
Q 044578 347 DFPATVKLGTGRTITGVSLYKGRRALLPNKQYPVVYMGSNSSNSSSLCLEGTLNPTTVAGKIVICDRGISPRVQKGQVVK 426 (769)
Q Consensus 347 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~~~~~~ 426 (769)
..
T Consensus 192 ~~------------------------------------------------------------------------------ 193 (546)
T 2qtw_B 192 QP------------------------------------------------------------------------------ 193 (546)
T ss_dssp CB------------------------------------------------------------------------------
T ss_pred Cc------------------------------------------------------------------------------
Confidence 00
Q ss_pred hcCceEEEEecCCCCCccccccccccceEEEChhhhHHHHHHHhcCCCceEEEEecceeecccCCCeeccccCCCCCCCC
Q 044578 427 DAGGIGVILANTAANGEELVADCHLLPAVAVGEIEGKEIKQYASTSPKATASLALLGTRVGIKPSPVVAAFSSRGPNFLT 506 (769)
Q Consensus 427 ~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fSS~GP~~~~ 506 (769)
...-..||++||.
T Consensus 194 ----------------------------------------------------------------a~~s~~fSn~G~~--- 206 (546)
T 2qtw_B 194 ----------------------------------------------------------------VTLGTLGTNFGRC--- 206 (546)
T ss_dssp ----------------------------------------------------------------CEETTEECCBSTT---
T ss_pred ----------------------------------------------------------------ccccCCcCCCCCc---
Confidence 0001128999974
Q ss_pred CCcccCeeeeCCCceeecccCCCCCCCCCCCccccceeeeccccchhhhhHHHHHHHHhhCCCCCHHHHHHHHHhccccc
Q 044578 507 LEILKPDIVAPGVNILAAWSGETGPSSLPADHRRVKFNILSGTSMSCPHVSGIAALLKARHPEWSPAAIKSALMTTAYVH 586 (769)
Q Consensus 507 ~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lsp~~ik~~L~~TA~~~ 586 (769)
|||+|||++|+++++... ..|..++|||||||||||++|||+|++|+|+|+|||++|++||.+.
T Consensus 207 -----vDI~APG~~I~St~~~~~-----------~~y~~~SGTSmAAP~VAG~aALlls~~P~ltp~qVr~~L~~tAt~~ 270 (546)
T 2qtw_B 207 -----VDLFAPGEDIIGASSDCS-----------TCFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIHFSAKD 270 (546)
T ss_dssp -----CCEEEECSSEEEECTTST-----------TCEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTSEES
T ss_pred -----ceEEecCccEEeeccCCC-----------CcEeeeCcCcHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhcccc
Confidence 499999999999987642 2799999999999999999999999999999999999999999865
Q ss_pred CCCCCCCC------CCC--CCCCCCCCCCCCcc--cCccccCC
Q 044578 587 DNTHNPLK------DAS--SYEPSSPYDHGAGH--INPVKALD 619 (769)
Q Consensus 587 ~~~g~~~~------~~~--~~~~~~~~~~G~G~--vd~~~Al~ 619 (769)
........ ... ...+.....+|+|+ .++..+..
T Consensus 271 ~i~~~~~p~~~~~~tpN~l~~~~~~~~~~G~~l~~~~~w~a~s 313 (546)
T 2qtw_B 271 VINEAWFPEDQRVLTPNLVAALPPSTHGAGWQLFCRTVWSAHS 313 (546)
T ss_dssp CSCGGGSCHHHHTTSCCEECCCCCTTCC--CCCEEEEEECCCC
T ss_pred ccCCccCccccCCCCccchhccCCcccccCCCcchhchhccCC
Confidence 32211000 000 01122445788888 77777765
No 32
>3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} SCOP: c.41.1.1 PDB: 3f7o_A
Probab=100.00 E-value=1.8e-46 Score=395.90 Aligned_cols=239 Identities=32% Similarity=0.441 Sum_probs=199.3
Q ss_pred ccCcCCCCCC------CccccCCCCCCcEEEEeccccCCCCCCcccCCCCCCCCccccccccCCCcccccCCceeEeeEe
Q 044578 119 FLGLEPADST------SIWSQKVADYDVIVGVLDTGIWPESASFNDTGMTPVPAHWKGACETGRGFQKHHCNRKIVGARV 192 (769)
Q Consensus 119 ~~g~~~~~~~------~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~~~~~~~n~ki~g~~~ 192 (769)
.|++++++.+ ..|+.. +|+||+|||||||||++||+|.++ +...++
T Consensus 8 ~W~l~~i~~~~~~~~~~~~~~~-~G~gv~VaViDtGvd~~h~~l~~~---------------------------~~~~~~ 59 (279)
T 3f7m_A 8 TWGLTRISHRARGSTAYAYDTS-AGAGACVYVIDTGVEDTHPDFEGR---------------------------AKQIKS 59 (279)
T ss_dssp CHHHHHHTCSSSCCCSEEECTT-TTTTEEEEEEESCCCTTCGGGTTC---------------------------EEEEEE
T ss_pred CCCHhhcCCCCCCCcceeecCC-CCCCCEEEEEcCCCCCCChhhccc---------------------------cccccC
Confidence 4666555433 355555 899999999999999999999753 333333
Q ss_pred cccchhhccCcccccCCCCCCCCCCCChhhhhHhhccCCCCCCCccccccccceeeccCceEEEEEEeeCCC-CCHHHHH
Q 044578 193 FYRGYEAATGKINEQNEYKSPRDQDGHGTHTAATVAGSPVHGANLLGYAYGTARGMSTGARIAVYKVCWSGG-CFSSDIL 271 (769)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~sdi~ 271 (769)
|..+ ..|..||||||||||+|+. .||||+|+|+.+|+++..+ +..++++
T Consensus 60 ~~~~----------------~~d~~gHGT~vAgii~~~~--------------~GvAp~a~l~~~~v~~~~~~~~~~~~~ 109 (279)
T 3f7m_A 60 YAST----------------ARDGHGHGTHCAGTIGSKT--------------WGVAKKVSIFGVKVLDDSGSGSLSNII 109 (279)
T ss_dssp CSSS----------------SSCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHH
T ss_pred CCCC----------------CCCCCCcHHHHHHHHhcCc--------------cccCCCCEEEEEEeeCCCCCcCHHHHH
Confidence 4322 3378999999999999873 7999999999999998876 7888999
Q ss_pred HHHHHHHhCC-------CcEEEeccCCCCCCCccchHHHHHHHHHhcCcEEEEecCCCCCCCCc-ccCCCCceEEecCCC
Q 044578 272 SAVDRAVADG-------VNVLSISLGGGVSSYHRDSLSIATFGAMEMGVFVSCSAGNGGPDPVS-LTNVSPWITTVGAST 343 (769)
Q Consensus 272 ~ai~~a~~~g-------~dVIn~SlG~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~G~~~~~-~~~~~p~vitVgA~~ 343 (769)
+|++|+++++ ++|||||||.. ..+.+..++.++.++|++||+||||+|..... .+...+++|+|||.+
T Consensus 110 ~ai~~~~~~~~~~~~~~~~Vin~S~g~~----~~~~~~~a~~~a~~~gv~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~ 185 (279)
T 3f7m_A 110 AGMDFVASDRQSRNCPRRTVASMSLGGG----YSAALNQAAARLQSSGVFVAVAAGNDNRDAANTSPASEPTVCTVGATD 185 (279)
T ss_dssp HHHHHHHHHGGGSCCTTEEEEEECCCEE----CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEEC
T ss_pred HHHHHHHhccccccCCCCeEEEeCCCcC----ccHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCcCCCCCCCEEEEeecC
Confidence 9999999876 89999999975 34567777778999999999999999976543 477789999999732
Q ss_pred CCCceeeEEEeCCCcEEEEEEeccCCcCCCCCccccEEEecCCCCCCCCcccCCCCCCCCccceEEEEeCCCCchhhhhH
Q 044578 344 LDRDFPATVKLGTGRTITGVSLYKGRRALLPNKQYPVVYMGSNSSNSSSLCLEGTLNPTTVAGKIVICDRGISPRVQKGQ 423 (769)
Q Consensus 344 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~~~ 423 (769)
T Consensus 186 -------------------------------------------------------------------------------- 185 (279)
T 3f7m_A 186 -------------------------------------------------------------------------------- 185 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhcCceEEEEecCCCCCccccccccccceEEEChhhhHHHHHHHhcCCCceEEEEecceeecccCCCeeccccCCCCC
Q 044578 424 VVKDAGGIGVILANTAANGEELVADCHLLPAVAVGEIEGKEIKQYASTSPKATASLALLGTRVGIKPSPVVAAFSSRGPN 503 (769)
Q Consensus 424 ~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fSS~GP~ 503 (769)
..+.++.||++||.
T Consensus 186 ------------------------------------------------------------------~~~~~~~~S~~g~~ 199 (279)
T 3f7m_A 186 ------------------------------------------------------------------SNDVRSTFSNYGRV 199 (279)
T ss_dssp ------------------------------------------------------------------TTSBBCTTCCBSTT
T ss_pred ------------------------------------------------------------------CCCCCCCCCCCCCC
Confidence 12367899999996
Q ss_pred CCCCCcccCeeeeCCCceeecccCCCCCCCCCCCccccceeeeccccchhhhhHHHHHHHHhhCCCCCHHHHHHHHHhcc
Q 044578 504 FLTLEILKPDIVAPGVNILAAWSGETGPSSLPADHRRVKFNILSGTSMSCPHVSGIAALLKARHPEWSPAAIKSALMTTA 583 (769)
Q Consensus 504 ~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lsp~~ik~~L~~TA 583 (769)
. ||+|||++|+++++.+ .|..++|||||||+|||++|||+|++|. ++++||++|++||
T Consensus 200 ~--------di~ApG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~-t~~~v~~~L~~tA 257 (279)
T 3f7m_A 200 V--------DIFAPGTSITSTWIGG-------------RTNTISGTSMATPHIAGLAAYLFGLEGG-SAGAMCGRIQTLS 257 (279)
T ss_dssp C--------CEEEECSSEEEECGGG-------------CEEEECSHHHHHHHHHHHHHHHHHHTCC-CTTTHHHHHHHHS
T ss_pred C--------eEEECCCCeEeecCCC-------------CEEEeeEHHHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHhc
Confidence 5 9999999999998764 7999999999999999999999999999 9999999999999
Q ss_pred cccC
Q 044578 584 YVHD 587 (769)
Q Consensus 584 ~~~~ 587 (769)
++..
T Consensus 258 ~~~~ 261 (279)
T 3f7m_A 258 TKNV 261 (279)
T ss_dssp EESC
T ss_pred cccc
Confidence 8764
No 33
>2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A*
Probab=100.00 E-value=8.2e-46 Score=421.46 Aligned_cols=293 Identities=18% Similarity=0.201 Sum_probs=217.1
Q ss_pred cccCcC-------CCCCCCccccCCCCCCcEEEEeccccCCCCCCcccCCCCCCCCccccccccCCCcccccCCceeEee
Q 044578 118 LFLGLE-------PADSTSIWSQKVADYDVIVGVLDTGIWPESASFNDTGMTPVPAHWKGACETGRGFQKHHCNRKIVGA 190 (769)
Q Consensus 118 ~~~g~~-------~~~~~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~~~~~~~n~ki~g~ 190 (769)
.+|++. .++...+|+.+++|+||+|||||||||++||+|.++- +. .+.
T Consensus 27 ~qW~l~~~~~~g~~i~~~~aw~~g~tG~gv~VaViDtGvd~~Hpdl~~~~-------~~------------------~~~ 81 (503)
T 2id4_A 27 RQWHLVNPSFPGSDINVLDLWYNNITGAGVVAAIVDDGLDYENEDLKDNF-------CA------------------EGS 81 (503)
T ss_dssp GCTTTSCSSSTTCSCCCHHHHHTTCSCTTCEEEEEESCCCTTSTTTTTTB-------CG------------------GGC
T ss_pred hccCcCCCCCcccccChHHHHhcCCCCCCeEEEEEeCCCCCCChhHhhcc-------cc------------------cCc
Confidence 456665 2344779999999999999999999999999997640 00 012
Q ss_pred EecccchhhccCcccccCCCCCCCCCCCChhhhhHhhccCCCCCCCccccccccceeeccCceEEEEEEeeCCCCCHHHH
Q 044578 191 RVFYRGYEAATGKINEQNEYKSPRDQDGHGTHTAATVAGSPVHGANLLGYAYGTARGMSTGARIAVYKVCWSGGCFSSDI 270 (769)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~sdi 270 (769)
++|.++. .......|..||||||||||||...++.+ +.||||+|+|+.+|+++.. ++..++
T Consensus 82 ~d~~~~~----------~~~~p~~d~~gHGT~vAGiiaa~~~n~~~--------~~GvAp~a~i~~~rv~~~~-~~~~~~ 142 (503)
T 2id4_A 82 WDFNDNT----------NLPKPRLSDDYHGTRCAGEIAAKKGNNFC--------GVGVGYNAKISGIRILSGD-ITTEDE 142 (503)
T ss_dssp EETTTTB----------SCCCCCSTTTTHHHHHHHHHHCCSSSSSS--------CCCTTTTSEEEEEECTTSC-CCHHHH
T ss_pred ccCCCCC----------CCCCCCCCCCChHHHHHHHHHhccCCCCC--------cEEECCCCEEEEEEeeCCC-CChHHH
Confidence 3333221 00112357889999999999998644432 3899999999999999743 678889
Q ss_pred HHHHHHHHhCCCcEEEeccCCCCCC----CccchHHHHHHHHH-----hcCcEEEEecCCCCCCCC--cccC--CCCceE
Q 044578 271 LSAVDRAVADGVNVLSISLGGGVSS----YHRDSLSIATFGAM-----EMGVFVSCSAGNGGPDPV--SLTN--VSPWIT 337 (769)
Q Consensus 271 ~~ai~~a~~~g~dVIn~SlG~~~~~----~~~~~~~~~~~~a~-----~~Gi~vV~AAGN~G~~~~--~~~~--~~p~vi 337 (769)
++||+|+++++ +|||||||..... .....+..++.++. .+|++||+||||+|.... .++. ..+++|
T Consensus 143 ~~ai~~a~~~~-~Iin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~r~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vI 221 (503)
T 2id4_A 143 AASLIYGLDVN-DIYSCSWGPADDGRHLQGPSDLVKKALVKGVTEGRDSKGAIYVFASGNGGTRGDNCNYDGYTNSIYSI 221 (503)
T ss_dssp HHHTTTTTTTC-SEEEECEESCCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCCGGGBTTTTCTTEE
T ss_pred HHHHHhHhhcC-CEEEeCCCcCCCCccccCchHHHHHHHHHHHHhcccCCCcEEEEecCCCCCcCCCCCCCcccCCCCEE
Confidence 99999999998 9999999975421 11234555555555 479999999999986532 2222 456789
Q ss_pred EecCCCCCCceeeEEEeCCCcEEEEEEeccCCcCCCCCccccEEEecCCCCCCCCcccCCCCCCCCccceEEEEeCCCCc
Q 044578 338 TVGASTLDRDFPATVKLGTGRTITGVSLYKGRRALLPNKQYPVVYMGSNSSNSSSLCLEGTLNPTTVAGKIVICDRGISP 417 (769)
Q Consensus 338 tVgA~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~ 417 (769)
+|||.+.
T Consensus 222 ~VgA~~~------------------------------------------------------------------------- 228 (503)
T 2id4_A 222 TIGAIDH------------------------------------------------------------------------- 228 (503)
T ss_dssp EEEEECT-------------------------------------------------------------------------
T ss_pred EEEeeCC-------------------------------------------------------------------------
Confidence 9987321
Q ss_pred hhhhhHHHhhcCceEEEEecCCCCCccccccccccceEEEChhhhHHHHHHHhcCCCceEEEEecceeecccCCCeeccc
Q 044578 418 RVQKGQVVKDAGGIGVILANTAANGEELVADCHLLPAVAVGEIEGKEIKQYASTSPKATASLALLGTRVGIKPSPVVAAF 497 (769)
Q Consensus 418 ~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~f 497 (769)
.+.++.|
T Consensus 229 -------------------------------------------------------------------------~~~~a~~ 235 (503)
T 2id4_A 229 -------------------------------------------------------------------------KDLHPPY 235 (503)
T ss_dssp -------------------------------------------------------------------------TSCCCTT
T ss_pred -------------------------------------------------------------------------CCCcCCc
Confidence 2367899
Q ss_pred cCCCCCCCCCCcccCeeee----CCCceeecccCCCCCCCCCCCccccceeeeccccchhhhhHHHHHHHHhhCCCCCHH
Q 044578 498 SSRGPNFLTLEILKPDIVA----PGVNILAAWSGETGPSSLPADHRRVKFNILSGTSMSCPHVSGIAALLKARHPEWSPA 573 (769)
Q Consensus 498 SS~GP~~~~~~~lKPDI~A----PG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lsp~ 573 (769)
|++||.. |++| ||.+|+++.... ..|..++|||||||||||++|||+|++|+|+++
T Consensus 236 S~~g~~~--------~~~a~~~gpG~~I~st~~~~------------~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~ 295 (503)
T 2id4_A 236 SEGCSAV--------MAVTYSSGSGEYIHSSDING------------RCSNSHGGTSAAAPLAAGVYTLLLEANPNLTWR 295 (503)
T ss_dssp CCCCTTE--------EEEEECSBTTBCEEEECSTT------------CEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred CCCCCcc--------eEeecCCCCCCceEeecCCC------------CceecCCCccccchhhhHHHHHHHHhCCCCCHH
Confidence 9999987 8887 899999985432 279999999999999999999999999999999
Q ss_pred HHHHHHHhcccccCCC-CCCCCCCCCCCCCCCCCCCCcccCccccCCCCc
Q 044578 574 AIKSALMTTAYVHDNT-HNPLKDASSYEPSSPYDHGAGHINPVKALDPGL 622 (769)
Q Consensus 574 ~ik~~L~~TA~~~~~~-g~~~~~~~~~~~~~~~~~G~G~vd~~~Al~~~l 622 (769)
+||.+|++||+++... ...+.... ........||||+||+.+|++...
T Consensus 296 ~v~~~L~~tA~~~~~~~~~~~~~~~-~g~~~~~~~G~G~vda~~Av~~a~ 344 (503)
T 2id4_A 296 DVQYLSILSAVGLEKNADGDWRDSA-MGKKYSHRYGFGKIDAHKLIEMSK 344 (503)
T ss_dssp HHHHHHHHHCBCCTTCGGGCCEECS-SSSEEBTTTBTCBCCHHHHHHHHT
T ss_pred HHHHHHHhccccCCCCcCCCceecC-CCCccCcccCCcEecHHHHHHHHh
Confidence 9999999999987643 11111111 111223589999999999998544
No 34
>3hjr_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria}
Probab=100.00 E-value=1.4e-43 Score=413.76 Aligned_cols=319 Identities=20% Similarity=0.190 Sum_probs=200.8
Q ss_pred CCCccccCCCCCCcEEEEeccccCCCCCCcccCCCCCCCCccccccccCCCcccccCCceeEeeEecccchhhccCcccc
Q 044578 127 STSIWSQKVADYDVIVGVLDTGIWPESASFNDTGMTPVPAHWKGACETGRGFQKHHCNRKIVGARVFYRGYEAATGKINE 206 (769)
Q Consensus 127 ~~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~~~~~~~~~~~w~g~~~~g~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~ 206 (769)
...+|..+++|+||+|||||||||++||||.++ . ..+.++|..+..
T Consensus 59 v~~aw~~g~tG~GV~VaViDtGid~~HpDL~~n-------~-------------------~~~~~~~~~~~~-------- 104 (600)
T 3hjr_A 59 LWWAHRTGVLGQGVNVAVVDDGLAIAHPDLADN-------V-------------------RPGSKNVVTGSD-------- 104 (600)
T ss_dssp CHHHHHHTCSCTTCEEEEESSCCCTTCTTTGGG-------B-------------------CSCCBCTTTSSS--------
T ss_pred HHHHHHcCCCCCCeEEEEEcCCCCCCChhHhhc-------c-------------------ccCcceeecCCC--------
Confidence 367899999999999999999999999999753 0 011222322210
Q ss_pred cCCCCCCCCCCCChhhhhHhhccCCCCCCCccccccccceeeccCceEEEEEEeeCCC-CCHHHHHHHH-HHHHhCCCcE
Q 044578 207 QNEYKSPRDQDGHGTHTAATVAGSPVHGANLLGYAYGTARGMSTGARIAVYKVCWSGG-CFSSDILSAV-DRAVADGVNV 284 (769)
Q Consensus 207 ~~~~~~~~D~~gHGThVAGiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~sdi~~ai-~~a~~~g~dV 284 (769)
+.....|..+|||||||||||.. ++ .| +.||||+|+|+.+|++++.+ +..++++.|+ +++..++++|
T Consensus 105 --dp~p~~~~~gHGThVAGiIAa~~-n~---~g-----~~GVAp~A~l~~~rvl~~~~~~~~~~~~~a~~~~~~~~~~~I 173 (600)
T 3hjr_A 105 --DPTPTDPDTAHGTSVSGIIAAVD-NA---IG-----TKGIAPRAQLQGFNLLDDNSQQLQKDWLYALGDSNASRDNRV 173 (600)
T ss_dssp --CCCCCSTTCCHHHHHHHHHHCCS-SS---SS-----CCCSSTTCEEEEECTTSTTCCCCHHHHHHHTTSSHHHHTCSE
T ss_pred --CCCCCCCCCChHHHHHHHHhEeC-CC---CC-----cEEeCCCCEEEEEEeecCCCCccHHHHHHHhhhhhhhcCCCE
Confidence 11123467899999999999963 22 22 38999999999999998776 6777877766 6677889999
Q ss_pred EEeccCCCCC-CCccc-----hHHHHHHHH--HhcCcEEEEecCCCCCCCCcccCCCCceEEecCCCCCCceeeEEEeCC
Q 044578 285 LSISLGGGVS-SYHRD-----SLSIATFGA--MEMGVFVSCSAGNGGPDPVSLTNVSPWITTVGASTLDRDFPATVKLGT 356 (769)
Q Consensus 285 In~SlG~~~~-~~~~~-----~~~~~~~~a--~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~~~ 356 (769)
||+|||.... ....+ .+..++..+ ..+|+++|+||||.+....... . .+
T Consensus 174 ~n~S~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~AaGNg~~~~~~~~-----~-~~----------------- 230 (600)
T 3hjr_A 174 FNQSYGMSVVDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGG-----Y-VL----------------- 230 (600)
T ss_dssp EEECCCCCCSSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEETT-----E-EE-----------------
T ss_pred EecccCccccCCccCCcchhhhHHHHHHHhhhccCCcEEEEeccCccccccccc-----c-cc-----------------
Confidence 9999997541 11111 222222222 2589999999999764311000 0 00
Q ss_pred CcEEEEEEeccCCcCCCCCccccEEEecCCCCCCCCcccCCCCCCCCccceEEEEeCCCCchhhhhHHHhhcCceEEEEe
Q 044578 357 GRTITGVSLYKGRRALLPNKQYPVVYMGSNSSNSSSLCLEGTLNPTTVAGKIVICDRGISPRVQKGQVVKDAGGIGVILA 436 (769)
Q Consensus 357 g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~~~~~~~~~~~~Ga~g~i~~ 436 (769)
...+.........|.... +......|.+-
T Consensus 231 ------------------------~~~g~~~~~~~~~~~~d~--~~~~~~~IsVg------------------------- 259 (600)
T 3hjr_A 231 ------------------------NRTGNGPKLPFENSNLDP--SNSNFWNLVVS------------------------- 259 (600)
T ss_dssp ------------------------EEESSCCCCCSSBTTSSG--GGGSSSEEEEE-------------------------
T ss_pred ------------------------ccCCCCCCCCcccccccC--ccccCcceEEe-------------------------
Confidence 000000000001111000 00000011110
Q ss_pred cCCCCCccccccccccceEEEChhhhHHHHHHHhcCCCceEEEEecceeecccCCCeeccccCCCCCCCCCCcccCeeee
Q 044578 437 NTAANGEELVADCHLLPAVAVGEIEGKEIKQYASTSPKATASLALLGTRVGIKPSPVVAAFSSRGPNFLTLEILKPDIVA 516 (769)
Q Consensus 437 n~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~A 516 (769)
.....+.++.||++|+.. +++|
T Consensus 260 --------------------------------------------------A~~~~g~~a~yS~~G~~v--------~~~a 281 (600)
T 3hjr_A 260 --------------------------------------------------ALNADGVRSSYSSVGSNI--------FLSA 281 (600)
T ss_dssp --------------------------------------------------EECTTSSBCTTCCBCTTC--------CEEE
T ss_pred --------------------------------------------------eecCCCCEeecccCCcce--------eecc
Confidence 012345789999999987 8999
Q ss_pred CCCcee--------ecccCCCCC-------------CCCCCCccccceeeeccccchhhhhHHHHHHHHhhCCCCCHHHH
Q 044578 517 PGVNIL--------AAWSGETGP-------------SSLPADHRRVKFNILSGTSMSCPHVSGIAALLKARHPEWSPAAI 575 (769)
Q Consensus 517 PG~~I~--------sa~~~~~~~-------------~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lsp~~i 575 (769)
||.++. +..++.... ...........|..++|||||||||||++|||+|++|+||++||
T Consensus 282 pg~~~~~~~~~~vt~~~pG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sGTSmAaP~VAGvaALll~a~P~lt~~~v 361 (600)
T 3hjr_A 282 TGGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGVMNGTSSATPSTSGAMALLMSAYPDLSVRDL 361 (600)
T ss_dssp ECCSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEEECSHHHHHHHHHHHHHHHHHHSTTSCHHHH
T ss_pred CCCCCCCCCcceeeecCCCccccccccCCccccccccccccCCCCCceeccccccccchhHHHHHHHHHHHCCCCCHHHH
Confidence 987632 222211000 00011123356889999999999999999999999999999999
Q ss_pred HHHHHhcccccCCCCCCCC--------------------CCCCCCCCCCCCCCCcccCccccCCCCce
Q 044578 576 KSALMTTAYVHDNTHNPLK--------------------DASSYEPSSPYDHGAGHINPVKALDPGLI 623 (769)
Q Consensus 576 k~~L~~TA~~~~~~g~~~~--------------------~~~~~~~~~~~~~G~G~vd~~~Al~~~lv 623 (769)
|.+|++||++++....|+. ....+..+ ...||||+||+.+|++.+..
T Consensus 362 ~~~L~~TA~~~d~~~~p~~~~~~~~~~~~~~~~~~~~w~~N~aG~~~-s~~yGfG~vDA~~aV~~A~~ 428 (600)
T 3hjr_A 362 RDLLARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNAAGMWF-SPTYGFGLIDVNKALELAAN 428 (600)
T ss_dssp HHHHHHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECTTSCEE-BTTTBTCBCCHHHHHHHHTT
T ss_pred HHHHHhhCccCCCCCCcccccccccccccccccccCCcccccCCceE-ccccCCceecHHHHHHHhhc
Confidence 9999999999987655421 11112222 34799999999999975433
No 35
>1t1e_A Kumamolisin; proenzyme, prosubtilase, activation mechanism, sedolisin, serine-carboxyl proteinase, hydrolase; 1.18A {Bacillus SP} SCOP: c.41.1.2 d.58.3.2 PDB: 1t1g_A 1t1i_A 1gt9_1 1gtg_1 1gtj_1* 1gtl_1* 1sio_A* 1sn7_A 1zvj_A 1siu_A 1zvk_A
Probab=99.91 E-value=1.6e-25 Score=255.11 Aligned_cols=96 Identities=31% Similarity=0.486 Sum_probs=77.6
Q ss_pred ceeeccCceEEEEEEeeCCCCCHHHHHHHHHHHHh---CCCcEEEeccCCCCCCC---ccchHHHHHHHHHhcCcEEEEe
Q 044578 245 ARGMSTGARIAVYKVCWSGGCFSSDILSAVDRAVA---DGVNVLSISLGGGVSSY---HRDSLSIATFGAMEMGVFVSCS 318 (769)
Q Consensus 245 ~~GvAP~A~l~~~kv~~~~g~~~sdi~~ai~~a~~---~g~dVIn~SlG~~~~~~---~~~~~~~~~~~a~~~Gi~vV~A 318 (769)
+.||||+|+|+.|++. ...++++++|+||++ ++++|||||||.....+ +.+.+..++.+|..+||+||+|
T Consensus 274 ~~gvAp~a~i~~~~~~----~~~~~~~~ai~~av~~~~~~~~VIS~S~G~~e~~~~~~~~~~~~~~~~~a~~~Gi~vv~A 349 (552)
T 1t1e_A 274 AGALAPGAKIAVYFAP----NTDAGFLNAITTAVHDPTHKPSIVSISWGGPEDSWAPASIAAMNRAFLDAAALGVTVLAA 349 (552)
T ss_dssp HHHHCTTSEEEEEECC----SSHHHHHHHHHHHHTCTTTCCSEEEECEEEEGGGSCHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred hhccCCCCeEEEEEcC----CCCchHHHHHHHHHhcccCCCCEEEecccCCcccCCHHHHHHHHHHHHHHHhCCeEEEEe
Confidence 5899999999999973 356789999999998 78999999999865322 1345666677888999999999
Q ss_pred cCCCCCCC--------CcccCCCCceEEecCCCC
Q 044578 319 AGNGGPDP--------VSLTNVSPWITTVGASTL 344 (769)
Q Consensus 319 AGN~G~~~--------~~~~~~~p~vitVgA~~~ 344 (769)
|||+|... ..+++.+|+|++||+++.
T Consensus 350 sGd~G~~~~~~~~~~~~~~PAs~P~V~aVGat~~ 383 (552)
T 1t1e_A 350 AGDSGSTDGEQDGLYHVDFPAASPYVLACGGTRL 383 (552)
T ss_dssp CCSBGGGTTCCSSSCCCEETTTSTTSEEEEEEEE
T ss_pred cCCCCCCCCCCCCcccccCcccCCCEEEEecccc
Confidence 99999653 356678899999999653
No 36
>1ga6_A Serine-carboxyl proteinase; serine-carboxyl proteinase, hydrolase-hydrolase inhibitor CO; 1.00A {Pseudomonas SP} SCOP: c.41.1.2 PDB: 1ga4_A* 1ga1_A 1kdv_A* 1kdy_A* 1kdz_A* 1ke1_A* 1ke2_A* 1nlu_A*
Probab=99.85 E-value=4.9e-22 Score=215.74 Aligned_cols=99 Identities=20% Similarity=0.203 Sum_probs=80.4
Q ss_pred eeeccCceEEEEEEeeCCCCCHHHHHHHHHHHHh-CCCcEEEeccCCCCC----CCccchHHHHHHHHHhcCcEEEEecC
Q 044578 246 RGMSTGARIAVYKVCWSGGCFSSDILSAVDRAVA-DGVNVLSISLGGGVS----SYHRDSLSIATFGAMEMGVFVSCSAG 320 (769)
Q Consensus 246 ~GvAP~A~l~~~kv~~~~g~~~sdi~~ai~~a~~-~g~dVIn~SlG~~~~----~~~~~~~~~~~~~a~~~Gi~vV~AAG 320 (769)
..+||+++++.|++.+..++..++++++|+||++ ++++|||||||.... ..+.+.+..++.+|..+||+||+|+|
T Consensus 90 g~~aP~a~~~~~~~~~~~~~~~~~~~~ai~~av~~~~~~ViS~S~G~~e~~~~~~~~~~~~~~~~~~a~~~Gitvv~AsG 169 (372)
T 1ga6_A 90 GSAGGAVQQLLFYMADQSASGNTGLTQAFNQAVSDNVAKVINVSLGWCEADANADGTLQAEDRIFATAAAQGQTFSVSSG 169 (372)
T ss_dssp HHTTSCEEEEEEEEECTTSSTTHHHHHHHHHHHHHCCCSEEEECCCEEHHHHHHTTHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred hhcCCCCcEEEEEeCCCCCcccHHHHHHHHHHHhcCCCCEEEeCCCCCCCCCchHHHHHHHHHHHHHHHhCCcEEEEEEC
Confidence 4578999999999987655778899999999998 899999999997541 12234667777788899999999999
Q ss_pred CCCCCCC-------------cccCCCCceEEecCCCC
Q 044578 321 NGGPDPV-------------SLTNVSPWITTVGASTL 344 (769)
Q Consensus 321 N~G~~~~-------------~~~~~~p~vitVgA~~~ 344 (769)
|+|...+ .+++..|+|++||+++.
T Consensus 170 d~G~~~~~~~g~~~~~~~~~~~PAs~P~V~aVGat~~ 206 (372)
T 1ga6_A 170 DEGVYECNNRGYPDGSTYSVSWPASSPNVIAVGGTTL 206 (372)
T ss_dssp SBTTBTTTTTTCCCTTCCBCEETTTCTTSEEEEEEEE
T ss_pred CCCCccccccCccCCccCCcCCCCCCCCeEEEEeeec
Confidence 9997532 45678899999999653
No 37
>3edy_A Tripeptidyl-peptidase 1; protease, TPP1, sedolisin, batten disease, lincl, zymogen, P exopeptidase, endopeptidase, S53 family, CLN2; HET: NAG; 1.85A {Homo sapiens} PDB: 3ee6_A*
Probab=99.02 E-value=3.3e-10 Score=128.14 Aligned_cols=76 Identities=20% Similarity=0.271 Sum_probs=54.1
Q ss_pred HHHHHHHHHHh--CCCcEEEeccCCCCCCC---ccchHHHHHHHHHhcCcEEEEecCCCCCCC----------CcccCCC
Q 044578 269 DILSAVDRAVA--DGVNVLSISLGGGVSSY---HRDSLSIATFGAMEMGVFVSCSAGNGGPDP----------VSLTNVS 333 (769)
Q Consensus 269 di~~ai~~a~~--~g~dVIn~SlG~~~~~~---~~~~~~~~~~~a~~~Gi~vV~AAGN~G~~~----------~~~~~~~ 333 (769)
.++..+++... +-++|||+|||...... +.+.+...+.++..+||.|++|+||+|... ...++..
T Consensus 284 ~~l~~l~~l~~~~~~~~ViS~S~G~~e~~~~~~y~~~~~~~~~~~~~~Gitv~~ASGD~G~~~~~~~~~~~~~~~~Pas~ 363 (544)
T 3edy_A 284 PFLQWLMLLSNESALPHVHTVSYGDDEDSLSSAYIQRVNTELMKAAARGLTLLFASGDSGAGCWSVSGRHQFRPTFPASS 363 (544)
T ss_dssp HHHHHHHHHTTCSSCCSEEEEECCEEGGGSCHHHHHHHHHHHHHHHHTTCEEEEECCSSTTBCEEETTEEECCCEETTTC
T ss_pred cHHHHHHHHhccCCCCcEEEecCCCcccccCHHHHHHHHHHHHHHHhCCeEEEEecCCCCccccCCCCCccccCCCcCCC
Confidence 35554554443 45899999999865322 233455556678889999999999999643 2456789
Q ss_pred CceEEecCCCC
Q 044578 334 PWITTVGASTL 344 (769)
Q Consensus 334 p~vitVgA~~~ 344 (769)
|||++||+++.
T Consensus 364 P~VtaVGgT~l 374 (544)
T 3edy_A 364 PYVTTVGGTSF 374 (544)
T ss_dssp TTSEEEEEEEE
T ss_pred CcEEEEeeeec
Confidence 99999998653
No 38
>2w2n_P Proprotein convertase subtilisin/kexin type 9; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2m_P 2w2o_P 2w2p_P 2w2q_P 2xtj_P
Probab=99.01 E-value=3.1e-10 Score=101.35 Aligned_cols=80 Identities=13% Similarity=0.068 Sum_probs=69.3
Q ss_pred cCCCCeEEEEeCCCCCCCcccchHHHHHHHhhcccccCCCccEEEEecceeeEEEEEcCHHHHHHHhcCCCeeEEEeCee
Q 044578 29 ESTKKTYIVQMDKSAMPESFSDHAEWFSSTVKSVAYKNDEDRIIYSYQTAFHGVAARLSEEEAERLEQEDGVMAIFPETK 108 (769)
Q Consensus 29 ~~~~~~yIV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~~~y~~~~~g~~~~~~~~~l~~L~~~p~V~~v~~~~~ 108 (769)
...+++|||+|+++..+.....|.+|+.+++.+. .....+.++|.+.|+||+++|+++++++|+++|+|.+||+|+.
T Consensus 34 ~~ip~~YIV~lk~~~~~~~~~~h~~~l~s~~~~~---~~~~~i~~sY~~~~~GFaa~Lt~~~~~~L~~~P~V~~VE~D~~ 110 (114)
T 2w2n_P 34 WRLPGTYVVVLKEETHLSQSERTARRLQAQAARR---GYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSS 110 (114)
T ss_dssp GEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHT---TCCCEEEEEECSSSSEEEEECCGGGHHHHHTSTTEEEEEEEEE
T ss_pred cCCCCcEEEEECCCCCHHHHHHHHHHHHHHhhhc---ccCCceEEEecccceEEEEEcCHHHHHHHHcCCCccEEEeCce
Confidence 3467899999999886666678889999887762 3467999999999999999999999999999999999999998
Q ss_pred ecc
Q 044578 109 YEL 111 (769)
Q Consensus 109 ~~~ 111 (769)
++.
T Consensus 111 v~~ 113 (114)
T 2w2n_P 111 VFA 113 (114)
T ss_dssp EEE
T ss_pred Eec
Confidence 764
No 39
>3cnq_P Subtilisin BPN'; uncleaved, proenzyme, substrate complex, hydrolase, metal- binding, protease, secreted, serine protease, sporulation; 1.71A {Bacillus amyloliquefaciens} PDB: 3bgo_P 3co0_P 1spb_P 1scj_B
Probab=98.94 E-value=2.4e-09 Score=89.49 Aligned_cols=75 Identities=15% Similarity=0.247 Sum_probs=58.6
Q ss_pred cCCCCeEEEEeCCCCCCCcccchHHHHHHHhhcccccCCCccEEEEecceeeEEEEEcCHHHHHHHhcCCCeeEEEeCee
Q 044578 29 ESTKKTYIVQMDKSAMPESFSDHAEWFSSTVKSVAYKNDEDRIIYSYQTAFHGVAARLSEEEAERLEQEDGVMAIFPETK 108 (769)
Q Consensus 29 ~~~~~~yIV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~~~y~~~~~g~~~~~~~~~l~~L~~~p~V~~v~~~~~ 108 (769)
...+++|||+||++...+.. ..++++. .+.++.++|.+ |+||+++++++++++|+++|+|++||+|+.
T Consensus 5 ~~i~~~YIV~~k~~~~~~~~------~~~~~~~-----~g~~i~~~y~~-~~Gfaa~l~~~~~~~L~~~p~V~~Ve~D~~ 72 (80)
T 3cnq_P 5 SNGEKKYIVGFKQGFKSCAK------KEDVISE-----KGGKLQKCFKY-VDAASATLNEKAVEELKKDPSVAYVEEDKL 72 (80)
T ss_dssp ---CCEEEEEECTTCCSHHH------HHHHHHT-----TTCEEEEECSS-SSEEEEECCHHHHHHHHTCTTEEEEEECCE
T ss_pred ccCCCCEEEEECCCCChHHH------HHHHHHH-----cCCcceEEEcc-cEEEEEEcCHHHHHHHHhCCCccEEEeCcE
Confidence 34679999999988764321 1233332 24799999998 999999999999999999999999999999
Q ss_pred eccccCC
Q 044578 109 YELHTTR 115 (769)
Q Consensus 109 ~~~~~~~ 115 (769)
++++++.
T Consensus 73 v~~~tt~ 79 (80)
T 3cnq_P 73 YRALSAT 79 (80)
T ss_dssp EEECCC-
T ss_pred EEEeeec
Confidence 9887654
No 40
>2qtw_A Proprotein convertase subtilisin/kexin type 9 Pro; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_A 2pmw_A 3h42_A 3bps_P 3gcw_P 3gcx_P 3p5b_P 3p5c_P
Probab=98.77 E-value=6.7e-09 Score=93.77 Aligned_cols=80 Identities=13% Similarity=0.068 Sum_probs=63.6
Q ss_pred cCCCCeEEEEeCCCCCCCcccchHHHHHHHhhcccccCCCccEEEEecceeeEEEEEcCHHHHHHHhcCCCeeEEEeCee
Q 044578 29 ESTKKTYIVQMDKSAMPESFSDHAEWFSSTVKSVAYKNDEDRIIYSYQTAFHGVAARLSEEEAERLEQEDGVMAIFPETK 108 (769)
Q Consensus 29 ~~~~~~yIV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~~~y~~~~~g~~~~~~~~~l~~L~~~p~V~~v~~~~~ 108 (769)
...+++|||+||++........+.+++.+++++. ..+..+.++|++.|+||+++++++++++|+++|+|.+|++|+.
T Consensus 44 ~~Ip~~YIV~~K~~~~~~~~~~~~~~l~~~~~~r---~~g~~i~~~Y~~~~~GFaa~l~~~~~~~L~~~p~V~~VE~D~~ 120 (124)
T 2qtw_A 44 WRLPGTYVVVLKEETHLSQSERTARRLQAQAARR---GYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSS 120 (124)
T ss_dssp GEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHT---TCCCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEEEE
T ss_pred cCCCCCEEEEECCCCCHHHHHHHHHHHHHHHhhc---ccCCceEEEecccceEEEEEcCHHHHHHHHcCCCCcEEEeCce
Confidence 3457999999999886555445555555443321 1357999999999999999999999999999999999999998
Q ss_pred ecc
Q 044578 109 YEL 111 (769)
Q Consensus 109 ~~~ 111 (769)
++.
T Consensus 121 v~a 123 (124)
T 2qtw_A 121 VFA 123 (124)
T ss_dssp EEE
T ss_pred Eec
Confidence 764
No 41
>1v5i_B POIA1, IA-1=serine proteinase inhibitor; protease-inhibitor complex, subtilisin, hydrolase-Pro binding complex; 1.50A {Pleurotus ostreatus} SCOP: d.58.3.2 PDB: 1itp_A
Probab=98.67 E-value=3.6e-08 Score=81.16 Aligned_cols=70 Identities=13% Similarity=0.203 Sum_probs=56.4
Q ss_pred CeEEEEeCCCCCCCcccchHHHHHHHhhcccccCCCccEEEEec-ceeeEEEEEcCHHHHHHHhcC--CCeeEEEeCeee
Q 044578 33 KTYIVQMDKSAMPESFSDHAEWFSSTVKSVAYKNDEDRIIYSYQ-TAFHGVAARLSEEEAERLEQE--DGVMAIFPETKY 109 (769)
Q Consensus 33 ~~yIV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~~~y~-~~~~g~~~~~~~~~l~~L~~~--p~V~~v~~~~~~ 109 (769)
+.|||.||++...+....+.+++.. . +..+.++|. ..|+||+++++++++++|+++ |.|.+||+|+.+
T Consensus 3 ~sYIV~lk~~~~~~~~~~~~~~~~~----~-----gg~i~~~y~~~~~~Gfa~~~~~~~l~~l~~~~~p~V~~VE~D~~v 73 (76)
T 1v5i_B 3 GKFIVIFKNDVSEDKIRETKDEVIA----E-----GGTITNEYNMPGMKGFAGELTPQSLTKFQGLQGDLIDSIEEDHVA 73 (76)
T ss_dssp EEEEEEECTTCCHHHHHHHHHHHHH----H-----TCCCCEEEEETTEEEEEEEECHHHHHHHHHTBTTTEEEEEECCEE
T ss_pred ceEEEEECCCCCHHHHHHHHHHHHh----h-----CCceEEEEEcCceeEEEEEcCHHHHHHHHhcCCCCCcEEcCCcEE
Confidence 6899999998765444444444432 2 357899994 799999999999999999999 899999999987
Q ss_pred cc
Q 044578 110 EL 111 (769)
Q Consensus 110 ~~ 111 (769)
+.
T Consensus 74 ~~ 75 (76)
T 1v5i_B 74 HA 75 (76)
T ss_dssp EC
T ss_pred eC
Confidence 64
No 42
>3icu_A E3 ubiquitin-protein ligase RNF128; E3 ligase, energy, PA domain, transmembrane,protein turnover conjugation pathway; HET: NAG; 2.10A {Homo sapiens}
Probab=98.65 E-value=1.4e-07 Score=91.30 Aligned_cols=94 Identities=16% Similarity=0.197 Sum_probs=74.7
Q ss_pred CCCcccCCCCCCC-------CccceEEEEeCCC-CchhhhhHHHhhcCceEEEEecCCCCCcc--cc--ccccccceEEE
Q 044578 390 SSSLCLEGTLNPT-------TVAGKIVICDRGI-SPRVQKGQVVKDAGGIGVILANTAANGEE--LV--ADCHLLPAVAV 457 (769)
Q Consensus 390 ~~~~c~~~~~~~~-------~~~g~ivl~~~g~-~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~--~~--~~~~~~p~~~i 457 (769)
....|.+...... ..+++|+|++||. |+|.+|..+++++||.++|++|+...+.. .+ .....||+++|
T Consensus 82 ~~~GC~~~~~~~~~~~~~~~~~~gkIaLV~RG~~CsF~~Kv~nAq~aGA~avIIyNn~~~g~~~~~m~~~~~~~IPsv~I 161 (194)
T 3icu_A 82 ALNACNPHTNFTVPTVWGSTVQVSWLALIQRGGGCTFADKIHLAYERGASGAVIFNFPGTRNEVIPMSHPGAVDIVAIMI 161 (194)
T ss_dssp CTTCCSTTCCBCCCBCTTSSCBCCEEEEEESCTTCCHHHHHHHHHHTTCSEEEEECCTTCTTCCCCCCCTTCCSSEEEEE
T ss_pred CcCCCCCCccccCCcccccccCCCeEEEEECCCCcCHHHHHHHHHHCCCcEEEEEeCCCCCCceeeecCCCCCceeEEEE
Confidence 4578987654322 2578999999999 99999999999999999999998532211 11 22357999999
Q ss_pred ChhhhHHHHHHHhcCCCceEEEEecc
Q 044578 458 GEIEGKEIKQYASTSPKATASLALLG 483 (769)
Q Consensus 458 ~~~~~~~l~~~~~~~~~~~~~~~~~~ 483 (769)
+..+|+.|++.+..+...++++.+..
T Consensus 162 s~~~G~~L~~~L~~G~~Vtvti~vg~ 187 (194)
T 3icu_A 162 GNLKGTKILQSIQRGIQVTMVIEVGK 187 (194)
T ss_dssp CHHHHHHHHHHHHTTCCEEEEEEEEE
T ss_pred CHHHHHHHHHHHHCCCeEEEEEECCC
Confidence 99999999999999988888877654
No 43
>2z30_B TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 2z2y_B 3a3p_B 2z56_B 2z58_B 2z57_B 3a3n_B 3a3o_B
Probab=97.67 E-value=4.2e-05 Score=60.53 Aligned_cols=63 Identities=19% Similarity=0.283 Sum_probs=50.9
Q ss_pred CeEEEEeCCCCCCCcccchHHHHHHHhhcccccCCCccEEEEecceeeEEEEEcCHHHHHHHhcCCCeeEEEeCeeecc
Q 044578 33 KTYIVQMDKSAMPESFSDHAEWFSSTVKSVAYKNDEDRIIYSYQTAFHGVAARLSEEEAERLEQEDGVMAIFPETKYEL 111 (769)
Q Consensus 33 ~~yIV~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~~~y~~~~~g~~~~~~~~~l~~L~~~p~V~~v~~~~~~~~ 111 (769)
.+|||.|+++... .+.++. .+.++.++|. .+++++++|+++.+++|+++|+|++||+|...+.
T Consensus 2 ~~~IV~f~~~~~~----------~~~i~~-----~gG~i~~~~~-~I~a~~~~lp~~~~~~L~~~p~V~yVE~D~~v~a 64 (65)
T 2z30_B 2 IRVIVSVDKAKFN----------PHEVLG-----IGGHIVYQFK-LIPAVVVDVPANAVGKLKKMPGVEKVEFDHQAVL 64 (65)
T ss_dssp EEEEEEECGGGCC----------GGGGGG-----GTCEEEEECS-SSSEEEEEECGGGHHHHHTSTTEEEEEECCEEEE
T ss_pred eeEEEEEcCcchh----------HHHHHH-----CCCEEEEEec-CCcEEEEEeCHHHHHHHhcCCCceEEecCcEEEc
Confidence 4899999875221 122333 3689999998 8999999999999999999999999999987653
No 44
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=96.45 E-value=0.015 Score=63.85 Aligned_cols=69 Identities=22% Similarity=0.297 Sum_probs=57.8
Q ss_pred CCccceEEEEeCCCCchhhhhHHHhhcCceEEEEecCCCCCcccc---ccccccceEEEChhhhHHHHHHHh
Q 044578 402 TTVAGKIVICDRGISPRVQKGQVVKDAGGIGVILANTAANGEELV---ADCHLLPAVAVGEIEGKEIKQYAS 470 (769)
Q Consensus 402 ~~~~g~ivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~---~~~~~~p~~~i~~~~~~~l~~~~~ 470 (769)
.+++|||+|+.+|.|.|..|..+++++||.|+|++++........ .....+|...++..+++.|.+.+.
T Consensus 111 ~dv~GkIvlv~~g~~~~~~k~~~A~~~GA~gvIi~~~~~~~~~g~~~~~~~~~IP~~~Is~~~a~~L~~~l~ 182 (421)
T 2ek8_A 111 KDLNGKIALIQRGNISFADKVRNAAKQGAKAVIIYNNTDGKLNGTLGGSDASFVAAVGITKQEGDALAANLR 182 (421)
T ss_dssp SCCTTSEEEEECCSSCHHHHHHHHHHTTCSEEEEECSSSSCCCCBCSSCCTTCCEEEEECHHHHHHHHHHHH
T ss_pred CCcCceEEEEeCCCCCHHHHHHHHHHCCCeEEEEEeCCCcccccccCCCCCCCccEEEeCHHHHHHHHHHhh
Confidence 489999999999999999999999999999999999864322111 134679999999999999999984
No 45
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.73 E-value=0.028 Score=50.18 Aligned_cols=73 Identities=19% Similarity=0.211 Sum_probs=56.5
Q ss_pred eeEEEEEEEEEeCCCCeeEEEEEeCCCCcEEEEecCeEEEeecCeeEEEEEEEEeeCCCCCcEEEEEEEE-cCceeEEeE
Q 044578 682 SALTLRRTVTNVGPPVSNYHVVVSPFKGVAIKVEPQKLHFTKKYQKLSYKITFTTKSPETIPEFGGLIWK-DGVHKVRSP 760 (769)
Q Consensus 682 ~~~~~~~tv~n~~~~~~ty~~~v~~~~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~~~~~~~G~~~~~-~~~~~v~~P 760 (769)
.+.+.+++|+|+|+.+..|+..... -.+++|...++ ++|+++.++|+|.+.. .+.+++.+.+. ++...+.++
T Consensus 41 ~~~~~~~~l~N~g~~~~~f~~~~~~----~F~i~P~~g~L-~pg~~~~i~V~F~P~~--~g~~~~~l~v~~~~g~~~~v~ 113 (122)
T 2ys4_A 41 YSTQKILLVRNIGNKNAVFHIKTCR----PFSIEPAIGTL-NVGESMQLEVEFEPQS--VGDHSGRLIVCYDTGEKVFVS 113 (122)
T ss_dssp SCEEEEEEEECCSSSCEEEEEECCT----TEEEESSEEEE-CTTCEEEEEEEECCSS--SBCCCCBCEEEESSSCEECCE
T ss_pred CeEEEEEEEEECCCCCEEEEEecCC----CeEEECCcCEE-CCCCEEEEEEEEEcCC--CccEEEEEEEEECCCCEEEEE
Confidence 4778999999999999999877643 36678999999 7999999999999973 44566666665 555665555
Q ss_pred E
Q 044578 761 I 761 (769)
Q Consensus 761 ~ 761 (769)
+
T Consensus 114 L 114 (122)
T 2ys4_A 114 L 114 (122)
T ss_dssp E
T ss_pred E
Confidence 4
No 46
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=95.68 E-value=0.035 Score=61.44 Aligned_cols=102 Identities=14% Similarity=0.205 Sum_probs=70.2
Q ss_pred CccccEEEecCCCCCCCCcccCCCCCCCCccceEEEEeCCCCc---------hhhh----hHHHhhcCceEEEEecCCCC
Q 044578 375 NKQYPVVYMGSNSSNSSSLCLEGTLNPTTVAGKIVICDRGISP---------RVQK----GQVVKDAGGIGVILANTAAN 441 (769)
Q Consensus 375 ~~~~~l~~~~~~~~~~~~~c~~~~~~~~~~~g~ivl~~~g~~~---------~~~~----~~~~~~~Ga~g~i~~n~~~~ 441 (769)
..+-++++..+. ..|.. ..+.+++|||||+.++.|. +..| ..++.++||+|+|++++...
T Consensus 105 ~vta~lV~v~~~-----~~~~~--~~~~dvkGKIVlv~~~~~~~~~~~~y~~~~~kr~~~a~~A~~aGA~avIi~~~~~~ 177 (444)
T 3iib_A 105 GLSATIVRFDTL-----QDLQN--AEAGSLNDKIAFIDAKTERHRDGKGYGQTASGRSRGAVAAAEKGAVGIIIRSIGTD 177 (444)
T ss_dssp CEEEEEEEESSH-----HHHHT--SCTTTTTTCEEEECCCCCCCTTCHHHHHHHHHHHHHHHHHHHTTCSEEEEECSCSC
T ss_pred CeEEEEEecCCH-----HHHhh--ccccccCccEEEEeCCCCCCcccccccchhhhhhhHHHHHHHCCCeEEEEEccCCc
Confidence 345677776421 11322 2356899999999998884 3444 35688999999999987432
Q ss_pred Ccc--------ccccccccceEEEChhhhHHHHHHHhcCCCceEEEEecc
Q 044578 442 GEE--------LVADCHLLPAVAVGEIEGKEIKQYASTSPKATASLALLG 483 (769)
Q Consensus 442 ~~~--------~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~ 483 (769)
... .......||++.|+.++++.|.+.+..+...++++....
T Consensus 178 ~~~~~~tg~~~~~~~~~~IP~~~Is~~da~~L~~~l~~g~~~~v~l~~~~ 227 (444)
T 3iib_A 178 HDRMAHTGMMRYEEGVTAIPAAAISNPDADLINAMLKRDKEVVISLELGS 227 (444)
T ss_dssp CSSCCCCCBCCCCTTSCCCCEEEECHHHHHHHHHHHTTTCCCEEEEEEEE
T ss_pred ccccccCCccccCCCCCCCCeEEecHHHHHHHHHHHhCCCCeEEEEEEee
Confidence 210 111245799999999999999999988776666665443
No 47
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=95.26 E-value=0.029 Score=64.55 Aligned_cols=69 Identities=17% Similarity=0.201 Sum_probs=55.4
Q ss_pred CCccceEEEEeCCCCchhhhhHHHhhcCceEEEEecCCCCCc------------------ccc----------------c
Q 044578 402 TTVAGKIVICDRGISPRVQKGQVVKDAGGIGVILANTAANGE------------------ELV----------------A 447 (769)
Q Consensus 402 ~~~~g~ivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~------------------~~~----------------~ 447 (769)
.+++|||+|+.+|.|.+..|..+++++||.|+|++++..... ... .
T Consensus 128 vdv~GkIvlv~~g~~~~~~K~~~A~~~GA~gvii~~~~~~~~~~~~~~~~~G~~~~~~Gdp~tpg~ps~~~~~~~~~~~~ 207 (640)
T 3kas_A 128 TPVNGSIVIVRAGKITFAEKVANAESLNAIGVLIYMDQTKFPIVNAELSFFGHAHLGTGDPYTPGFPSFNHTQFPPSRSS 207 (640)
T ss_dssp SCCTTSEEEEESCSSCHHHHHHHHHTTTCSEEEEECCTTTCCCSCTTCCCCEECCSSSSCSCCCSSCC---CCCCCCSSC
T ss_pred cccCCcEEEEecCCCCHHHHHHHHHHCCCeEEEEEeccccccccccccccccccccCCCCCCCCCccccccccccccccc
Confidence 479999999999999999999999999999999998753210 000 0
Q ss_pred cccccceEEEChhhhHHHHHHHh
Q 044578 448 DCHLLPAVAVGEIEGKEIKQYAS 470 (769)
Q Consensus 448 ~~~~~p~~~i~~~~~~~l~~~~~ 470 (769)
....||+..|+..+++.|.+.+.
T Consensus 208 ~~p~IP~~~Is~~~a~~Ll~~l~ 230 (640)
T 3kas_A 208 GLPNIPVQTISRAAAEKLFGNME 230 (640)
T ss_dssp CCCSSCEEECCHHHHHHHHTTEE
T ss_pred CCCCCCEEecCHHHHHHHHHHcc
Confidence 12368999999999999988764
No 48
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=94.60 E-value=0.043 Score=63.86 Aligned_cols=71 Identities=28% Similarity=0.376 Sum_probs=56.6
Q ss_pred CCCccceEEEEeCCCCchhhhhHHHhhcCceEEEEecCCCC-------------------------------Cccccc--
Q 044578 401 PTTVAGKIVICDRGISPRVQKGQVVKDAGGIGVILANTAAN-------------------------------GEELVA-- 447 (769)
Q Consensus 401 ~~~~~g~ivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~-------------------------------~~~~~~-- 447 (769)
..+++|||+|+++|.|.+.+|..+++++||.|+|++++... +....+
T Consensus 150 ~~~v~GkIvlv~~G~~~~~~Kv~~A~~~GA~gviiy~dp~d~~~~g~~~yP~~~~~p~~~vqrGsv~~~~~~GDp~TPG~ 229 (707)
T 3fed_A 150 GINCTGKIVIARYGKIFRGNKVKNAMLAGAIGIILYSDPADYFAPEVQPYPKGWNLPGTAAQRGNVLNLNGAGDPLTPGY 229 (707)
T ss_dssp CCCCTTCEEEEECCSSCHHHHHHHHHHTTCSEEEEECCHHHHCCTTCCBTTTSSBCCTTCCCCCCCCCCTTCCSTTCTTS
T ss_pred CCCCCCeEEEEECCCCCHhHHHHHHHHCCCEEEEEEcCchhccccccccCCCCccCCCccccccceecccCCCCCCCCCC
Confidence 45799999999999999999999999999999999986210 000000
Q ss_pred ---------------cccccceEEEChhhhHHHHHHHhc
Q 044578 448 ---------------DCHLLPAVAVGEIEGKEIKQYAST 471 (769)
Q Consensus 448 ---------------~~~~~p~~~i~~~~~~~l~~~~~~ 471 (769)
....||+.-|+..+++.|++.+..
T Consensus 230 ps~~~~~r~~~~~~~~~p~IP~~pIS~~da~~Ll~~l~g 268 (707)
T 3fed_A 230 PAKEYTFRLDVEEGVGIPRIPVHPIGYNDAEILLRYLGG 268 (707)
T ss_dssp CCCTTCCCCCGGGCTTCCSSCEEEECHHHHHHHHHTBCB
T ss_pred cccCCCcccChhhccCCCCCCeEecCHHHHHHHHHHhcC
Confidence 124799999999999999988764
No 49
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=93.21 E-value=0.64 Score=42.36 Aligned_cols=84 Identities=10% Similarity=-0.008 Sum_probs=64.2
Q ss_pred eeEEEEEEEEEeCCCCeeEEEEEeCC----CCcEEEEecCeEEEeecCeeEEEEEEEEeeCC-------CCCcEEEEEEE
Q 044578 682 SALTLRRTVTNVGPPVSNYHVVVSPF----KGVAIKVEPQKLHFTKKYQKLSYKITFTTKSP-------ETIPEFGGLIW 750 (769)
Q Consensus 682 ~~~~~~~tv~n~~~~~~ty~~~v~~~----~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~-------~~~~~~G~~~~ 750 (769)
...+.+++++|.|..+.+|+...... ..--++++|..-++ .+|++..+.|++..+.. ...-++--|++
T Consensus 43 ~~~~~~l~I~Ntg~vpa~F~f~~~~~~~~~~~~wl~v~P~~G~L-~Pge~~~I~v~~~v~~~~~~~ln~g~~~l~diLvL 121 (140)
T 3qbt_B 43 QLQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYL-EPNETVDISLDVYVSKDSVTILNSGEDKIEDILVL 121 (140)
T ss_dssp CCEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEE-CTTCEEEEEEEECBCHHHHHHHHHSSSCSCEEEEE
T ss_pred eeeeeEEEEEcCCccceEEEEecCCCchhhhhHhhhcCCccccc-CCCCeeEEEEEEEEccCcccccccchhhhheeEEE
Confidence 45688999999999999999985321 12246778999999 79999999999987541 12455667777
Q ss_pred E-cCceeEEeEEEEEee
Q 044578 751 K-DGVHKVRSPIVITRL 766 (769)
Q Consensus 751 ~-~~~~~v~~P~~~~~~ 766 (769)
. +++++..+|+...+.
T Consensus 122 ~Ve~G~d~fI~v~g~~~ 138 (140)
T 3qbt_B 122 HLDRGKDYFLTISGNYL 138 (140)
T ss_dssp EETTSCEEEEEEEEEEC
T ss_pred EeecCCcEEEEEecccc
Confidence 6 888999999987765
No 50
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=89.78 E-value=0.46 Score=41.20 Aligned_cols=67 Identities=12% Similarity=0.055 Sum_probs=49.4
Q ss_pred eeEEEEEEEEEeCCCCeeEEEEEeC-CCCcEEEEecCeEEEeecCeeEEEEEEEEeeCCCCCcEEEEEEEE
Q 044578 682 SALTLRRTVTNVGPPVSNYHVVVSP-FKGVAIKVEPQKLHFTKKYQKLSYKITFTTKSPETIPEFGGLIWK 751 (769)
Q Consensus 682 ~~~~~~~tv~n~~~~~~ty~~~v~~-~~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~~~~~~~G~~~~~ 751 (769)
...+.+++++|.|+.+..|+..... ..+...+++|..-.+ ++|++++++|+|++... +.+.=.|.+.
T Consensus 26 ~~~~~~~~l~N~g~~p~~~~~~~~~~~~~~~f~v~p~~g~i-~pg~~~~i~V~f~~~~~--g~f~~~i~v~ 93 (112)
T 2e6j_A 26 SAHCYEAILYNKGSIDALFNMTPPTSALGACFVFSPKEGII-EPSGVQAIQISFSSIIL--GNFEEEFLVN 93 (112)
T ss_dssp CCEEEEEEEEECCSSCEEEEECCCSSHHHHHCEEESSEEEE-CTTBCCEEEEEECCCCC--EEEEEEECEE
T ss_pred CEEEEEEEEEECCcceEEEEEecCCccccCcEEEECCcCEE-CCCCEEEEEEEEECCCc--ceEEEEEEEE
Confidence 3677889999999999999984311 112347778999888 79999999999999643 3344456655
No 51
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=86.71 E-value=0.28 Score=60.18 Aligned_cols=24 Identities=21% Similarity=0.529 Sum_probs=22.5
Q ss_pred CCCCCCcEEEEeccccCCCCCCcc
Q 044578 134 KVADYDVIVGVLDTGIWPESASFN 157 (769)
Q Consensus 134 ~~~G~Gv~VgVIDtGid~~Hp~f~ 157 (769)
.+.|+||+|||+|||||+.+|.|+
T Consensus 32 ~ydGrgv~iai~DtGVDP~a~glq 55 (1354)
T 3lxu_X 32 EYDGRDVTIAIFDSGVDPRATGLE 55 (1354)
T ss_dssp TCSSTTCEEEEEESCCCTTSTTSS
T ss_pred CCCCCccEEEEEeCCCCCCCCcce
Confidence 678999999999999999999995
No 52
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=86.52 E-value=2.5 Score=37.08 Aligned_cols=55 Identities=16% Similarity=0.185 Sum_probs=45.5
Q ss_pred eeEEEEEEEEEeCCCCeeEEEEEeCCCCcEEEEecCeEEEeecCeeEEEEEEEEeeC
Q 044578 682 SALTLRRTVTNVGPPVSNYHVVVSPFKGVAIKVEPQKLHFTKKYQKLSYKITFTTKS 738 (769)
Q Consensus 682 ~~~~~~~tv~n~~~~~~ty~~~v~~~~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~~ 738 (769)
-.-..++++.|....+.+|+++++..+++++. .+..+++ ++++..++.|.|.++.
T Consensus 31 I~N~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~-g~~~i~v-~~g~~~~~~v~v~~~~ 85 (118)
T 2r39_A 31 VENTYTLKVINKTQQVQEYNLDVKGLNDVSWY-GKQTIQV-EPGEVLNLPMSLGADP 85 (118)
T ss_dssp EEEEEEEEEEECSSSCEEEEEEEESCSSCEEE-SCCEEEE-CTTCEEEEEEEEEECG
T ss_pred EEEEEEEEEEECCCCCEEEEEEEeCCcccEEe-CCCcEEE-CCCCEEEEEEEEEECh
Confidence 35568899999999999999999988776654 3556888 7999999999998865
No 53
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=85.63 E-value=4.8 Score=42.87 Aligned_cols=84 Identities=10% Similarity=0.018 Sum_probs=63.7
Q ss_pred eeEEEEEEEEEeCCCCeeEEEEEeCCCCcE----EEEecCeEEEeecCeeEEEEEEEEeeCC-------CCCcEEEEEEE
Q 044578 682 SALTLRRTVTNVGPPVSNYHVVVSPFKGVA----IKVEPQKLHFTKKYQKLSYKITFTTKSP-------ETIPEFGGLIW 750 (769)
Q Consensus 682 ~~~~~~~tv~n~~~~~~ty~~~v~~~~g~~----v~v~p~~~~~~~~~~~~~~~vt~~~~~~-------~~~~~~G~~~~ 750 (769)
...+.++|++|.|..+.+|+..-....... ++++|..-++ .+|++.+++|++.++.. ...-.+--|++
T Consensus 46 ~~~~~~l~i~N~g~~pa~f~f~~~~~~~~~~~~wl~v~p~~g~l-~Pge~~~i~l~~~v~~~~~~~ln~g~~~l~diLvL 124 (366)
T 3qis_A 46 QLQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYL-EPNETVDISLDVYVSKDSVTILNSGEDKIEDILVL 124 (366)
T ss_dssp CCEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEE-CTTCEEEEEEEECBCTTTHHHHHHTSSCSCEEEEE
T ss_pred CeEEEEEEEEecCCceEEEEEEeCCCCCCCCCCcEEEeCCccEE-CCCCEEEEEEEEEECHHHHHHHhcCccccceEEEE
Confidence 467888999999999999999654322222 7789999888 79999999999988751 13445666777
Q ss_pred E-cCceeEEeEEEEEee
Q 044578 751 K-DGVHKVRSPIVITRL 766 (769)
Q Consensus 751 ~-~~~~~v~~P~~~~~~ 766 (769)
. +++++..+|+-..+.
T Consensus 125 ~ve~G~d~FI~v~~~~~ 141 (366)
T 3qis_A 125 HLDRGKDYFLTISGNYL 141 (366)
T ss_dssp EETTSCEEEEEEEEEEC
T ss_pred EEeCCCcEEEEeccccC
Confidence 6 678888888877665
No 54
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=85.16 E-value=0.56 Score=51.60 Aligned_cols=32 Identities=28% Similarity=0.300 Sum_probs=27.0
Q ss_pred cCCCeeccccCCCCCCCCCCcccCeeeeCCCceeecccCC
Q 044578 489 KPSPVVAAFSSRGPNFLTLEILKPDIVAPGVNILAAWSGE 528 (769)
Q Consensus 489 ~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa~~~~ 528 (769)
...+.++.||++||.. ||+|||++|+++++..
T Consensus 181 ~~~~~~~~~S~~g~~v--------dv~ApG~~i~s~~~~g 212 (441)
T 1y9z_A 181 DSNLDHAAFSQYTDQV--------EISGPGEAILSTVTVG 212 (441)
T ss_dssp CTTCCBCTTSCCCTTE--------EEEEECSSEEEECSTT
T ss_pred CCCCCCCccccCCCce--------EEEeccCCeeccccCC
Confidence 3456899999999866 9999999999998753
No 55
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=84.33 E-value=4.1 Score=39.97 Aligned_cols=78 Identities=9% Similarity=-0.021 Sum_probs=54.4
Q ss_pred eeEEEEEEEEEeCCCCeeEEEEEeCCCCcEEEEecCeEEEeecCeeEEEEEEEEeeCC-CCCcEEEEEEEE--c--Cce-
Q 044578 682 SALTLRRTVTNVGPPVSNYHVVVSPFKGVAIKVEPQKLHFTKKYQKLSYKITFTTKSP-ETIPEFGGLIWK--D--GVH- 755 (769)
Q Consensus 682 ~~~~~~~tv~n~~~~~~ty~~~v~~~~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~-~~~~~~G~~~~~--~--~~~- 755 (769)
...+.+++++|.|+.+.+++... .|..+++..+|. ++ ++|++.+++|+++.... .-+...+.|++. + +..
T Consensus 19 ~~~~~~~~i~N~g~~pl~i~~~~-~p~~~~~~~~~~--~I-~PG~~g~I~vt~~~~~~~~~G~~~~~i~v~~~~~~~~~~ 94 (220)
T 2qsv_A 19 DEGVVRLVVNNTDESDLQVAVVS-LPSFVSLDDRAF--RL-QAREPRELNLSLAVPRNMPPGMKDEPLVLEVTSPETGKK 94 (220)
T ss_dssp CCCEEEEEEEECSSSCEEEEEEE-CCTTEECSCCEE--EE-CSSSCEEEEEEECCCTTCCSEEEEEEEEEEEECTTTCCE
T ss_pred CcceEEEEEEeCCCCceEEEecc-CCCceEeeeCcc--ee-CCCCceEEEEEEcchhcccCCceeeEEEEEEEcCCCCcc
Confidence 45667889999999998888653 366666544444 45 79999999999988763 346667778876 3 333
Q ss_pred -eEEeEEEE
Q 044578 756 -KVRSPIVI 763 (769)
Q Consensus 756 -~v~~P~~~ 763 (769)
..++|+..
T Consensus 95 ~~~~i~v~g 103 (220)
T 2qsv_A 95 AVDSVMVSL 103 (220)
T ss_dssp EEEEEEEEE
T ss_pred cccEEEEEE
Confidence 44666554
No 56
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=70.30 E-value=26 Score=34.07 Aligned_cols=77 Identities=10% Similarity=0.013 Sum_probs=50.2
Q ss_pred eeEEEEEEEEEeCCCCeeEEEEEeCCCCcEEEEecCeEEEeecCeeEEEEEEEEeeCCCCC-c--EEEEEEEE-c--Cce
Q 044578 682 SALTLRRTVTNVGPPVSNYHVVVSPFKGVAIKVEPQKLHFTKKYQKLSYKITFTTKSPETI-P--EFGGLIWK-D--GVH 755 (769)
Q Consensus 682 ~~~~~~~tv~n~~~~~~ty~~~v~~~~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~~~~-~--~~G~~~~~-~--~~~ 755 (769)
...+.+++++|+|+.+...+-.........+..... .+ ++||+.+++|++++....+. | ....|.+. + ..+
T Consensus 134 ~~~~~~f~i~N~G~~pL~I~~v~~scgct~~~~~~~--~i-~PGe~~~i~v~~~~~~~~g~~~~~~~~~i~v~~N~~~~p 210 (220)
T 2qsv_A 134 ETTKAAIEIRNVGAGPLRLHSVTTRNPALTAVPDRT--EI-KPGGSTLLRIAVDPQVMKAEGWQSIAADISIICNDPQAP 210 (220)
T ss_dssp SCEEEEEEEEECSSSCEEEEEEEECSTTEEEEESCS--EE-CTTCEEEEEEEECHHHHHHTTCSEEEEEEEEEESCTTCS
T ss_pred CeEEEEEEEEECCCCCEEEEEEEeCCCCEeeecCCc--cC-CCCCEEEEEEEEecCCCCCcccceeccEEEEEECCCCCc
Confidence 467888999999999887754444444555554443 35 79999999999988654222 1 55666655 3 233
Q ss_pred eEEeEE
Q 044578 756 KVRSPI 761 (769)
Q Consensus 756 ~v~~P~ 761 (769)
.+++.+
T Consensus 211 ~~~l~i 216 (220)
T 2qsv_A 211 LRRIKV 216 (220)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 445544
No 57
>1row_A SSP-19, MSP-domain protein like family member; beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=68.21 E-value=17 Score=31.19 Aligned_cols=50 Identities=14% Similarity=0.036 Sum_probs=42.0
Q ss_pred EEEEEEEEeCCCCeeEEEEEeCCCCcEEEEecCeEEEeecCeeEEEEEEEEee
Q 044578 685 TLRRTVTNVGPPVSNYHVVVSPFKGVAIKVEPQKLHFTKKYQKLSYKITFTTK 737 (769)
Q Consensus 685 ~~~~tv~n~~~~~~ty~~~v~~~~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~ 737 (769)
+-+++++|.++....|++.-++|.-.. |.|..-.+ ++|++.++.|+..+.
T Consensus 18 ~~~l~L~N~t~~~vaFKVKtT~p~~y~--VrP~~G~I-~P~~~~~i~I~~q~~ 67 (109)
T 1row_A 18 SSTHKLVNGGAEKIVFKIKSSNNNEYR--IAPVFGFV-DPSGSKDVVITRTAG 67 (109)
T ss_dssp EEEEEEEECSSSCEEEEEEESCSSSEE--EECSEEEE-CTTEEEEEEEEECSC
T ss_pred eEEEEEEcCCCCeEEEEEEeCCCCceE--EcCCceEE-CCCCeEEEEEEeCCC
Confidence 467888999999999999999987665 56887655 899999999999874
No 58
>1z9l_A Vesicle-associated membrane protein-associated protein A; VAP-A, cytoplasmic domain, protein binding; HET: MSE; 1.70A {Rattus norvegicus} PDB: 1z9o_A 2rr3_A 3ikk_A
Probab=67.68 E-value=11 Score=33.22 Aligned_cols=53 Identities=9% Similarity=0.070 Sum_probs=44.5
Q ss_pred eeEEEEEEEEEeCCCCeeEEEEEeCCCCcEEEEecCeEEEeecCeeEEEEEEEEee
Q 044578 682 SALTLRRTVTNVGPPVSNYHVVVSPFKGVAIKVEPQKLHFTKKYQKLSYKITFTTK 737 (769)
Q Consensus 682 ~~~~~~~tv~n~~~~~~ty~~~v~~~~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~ 737 (769)
...+-+++|+|.++...-|++..++|.-.. |.|..=.+ +++++..+.|++.+.
T Consensus 27 ~~~~~~l~L~N~s~~~vaFKVKTT~p~~y~--VrP~~G~i-~P~~s~~v~V~~~~~ 79 (128)
T 1z9l_A 27 DVVTTNLKLQNPSDRKVCFKVKTTAPRRYC--VRPNSGVI-DPGSIVTVSVMLQPF 79 (128)
T ss_dssp SCEEEEEEEECCSSSCEEEEEEESCGGGEE--EESCEEEE-CTTCEEEEEEEECCC
T ss_pred ceEEEEEEEECCCCCeEEEEEECCCCCceE--EeCCCcEE-CCCCeEEEEEEECcC
Confidence 356788999999999999999999987554 57887666 899999999999874
No 59
>1m1s_A WR4; structural genomics, major sperm protein, bioinformatics, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=67.41 E-value=16 Score=31.81 Aligned_cols=51 Identities=14% Similarity=0.027 Sum_probs=42.3
Q ss_pred EEEEEEEEeCCCCeeEEEEEeCCCCcEEEEecCeEEEeecCeeEEEEEEEEeeC
Q 044578 685 TLRRTVTNVGPPVSNYHVVVSPFKGVAIKVEPQKLHFTKKYQKLSYKITFTTKS 738 (769)
Q Consensus 685 ~~~~tv~n~~~~~~ty~~~v~~~~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~~ 738 (769)
+.+++|+|.++....|++.-+.|.-.. |.|..-.+ ++|++.++.|+..+..
T Consensus 26 ~~~l~L~N~t~~~vAFKVKtT~p~~Yr--VrP~~G~I-~Pg~~~~I~I~~q~~~ 76 (116)
T 1m1s_A 26 NSTHNITSESDSRLAFKVKSSNNEHYR--VRPVYGFV-DAKGKSKLDINRLPGP 76 (116)
T ss_dssp EEEEEEEECSSSEEEEEEEESCTTTEE--EECSEEEE-CTTCEEEEEEEECSCC
T ss_pred EEEEEEECCCCCeEEEEEEecCCCceE--EcCCceEE-CCCCeEEEEEEeCCCC
Confidence 677888999999999999999887665 56886555 8999999999998753
No 60
>1msp_A MSP, major sperm protein; cytoskeletal protein, cell motility protein; 2.50A {Ascaris suum} SCOP: b.1.11.2 PDB: 3msp_A 2bvu_A 2msp_A 1grw_A
Probab=65.61 E-value=14 Score=32.69 Aligned_cols=52 Identities=15% Similarity=0.202 Sum_probs=43.6
Q ss_pred eEEEEEEEEEeCCCCeeEEEEEeCCCCcEEEEecCeEEEeecCeeEEEEEEEEee
Q 044578 683 ALTLRRTVTNVGPPVSNYHVVVSPFKGVAIKVEPQKLHFTKKYQKLSYKITFTTK 737 (769)
Q Consensus 683 ~~~~~~tv~n~~~~~~ty~~~v~~~~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~ 737 (769)
..+-.++|+|.++...-|.+..++|.-.. |.|..-.+ +++++..+.|++.+-
T Consensus 26 ~~~~~l~l~N~s~~~vaFKVKTT~p~~y~--VrP~~Gii-~P~~s~~v~V~~q~~ 77 (126)
T 1msp_A 26 KHTYHIKITNAGGRRIGWAIKTTNMRRLS--VDPPCGVL-DPKEKVLMAVSCDTF 77 (126)
T ss_dssp CCCEEEEEEECSSSCEEEEEEESCTTTEE--EESCEEEE-CTTCEEEEEEEECCC
T ss_pred ceEEEEEEECCCCCeEEEEEEcCCCCcEE--EECCCeEE-CCCCEEEEEEEecCC
Confidence 44567889999999999999999998765 56888767 799999999998873
No 61
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=64.49 E-value=26 Score=30.96 Aligned_cols=51 Identities=16% Similarity=0.093 Sum_probs=36.3
Q ss_pred eeEEEEEEEEEeCCCC-eeEEEEEeCCCCcEEEEecCeEEEeecCeeEEEEEEEEe
Q 044578 682 SALTLRRTVTNVGPPV-SNYHVVVSPFKGVAIKVEPQKLHFTKKYQKLSYKITFTT 736 (769)
Q Consensus 682 ~~~~~~~tv~n~~~~~-~ty~~~v~~~~g~~v~v~p~~~~~~~~~~~~~~~vt~~~ 736 (769)
...++++||+|.|..+ ..|++.+-. .|-.+.-. .+.+ ++|+++++++++.+
T Consensus 33 ~~~ti~vtV~N~G~~~a~~~~V~lyv-ng~~v~t~--~v~L-a~G~s~tv~f~~~~ 84 (127)
T 3idu_A 33 KLAEYEVHVKNLGGIGVPSTKVRVYI-NGTLYKNW--TVSL-GPKEEKVLTFNWTP 84 (127)
T ss_dssp CCEEEEEEEEECSSSCEEEEEEEEEE-TTEEEEEE--EEEE-CTTCEEEEEEEECC
T ss_pred CEEEEEEEEEECCCCccCCcEEEEEE-CCEEEeeE--Eecc-CCCCeEEEEEEEEc
Confidence 5889999999999865 568887654 44444322 3456 78999988887764
No 62
>1wic_A Hypothetical protein riken cDNA 6030424E15; beta sandwich fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.11.2
Probab=63.21 E-value=14 Score=33.89 Aligned_cols=52 Identities=12% Similarity=0.073 Sum_probs=43.8
Q ss_pred eEEEEEEEEEeCCCCeeEEEEEeCCCCcEEEEecCeEEEeecCeeEEEEEEEEee
Q 044578 683 ALTLRRTVTNVGPPVSNYHVVVSPFKGVAIKVEPQKLHFTKKYQKLSYKITFTTK 737 (769)
Q Consensus 683 ~~~~~~tv~n~~~~~~ty~~~v~~~~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~ 737 (769)
..+-.++|+|.++...-|++..++|.-.. |.|..=.+ +++++.++.|++.+.
T Consensus 36 ~~~~~l~L~N~s~~~VaFKVKTT~p~~y~--VrP~~GiI-~P~~s~~V~V~lq~~ 87 (152)
T 1wic_A 36 EKKTLIVLTNVTKNIVAFKVRTTAPEKYR--VKPSNSSC-DPGASIDIIVSPHGG 87 (152)
T ss_dssp CCCEEEEEEBCSSSCEEEEEEESCTTTEE--EESSEEEE-CTTCEEEEEEEECSS
T ss_pred eEEEEEEEEcCCCCeEEEEEECCCCCcee--ecCCCcEE-CCCCeEEEEEEecCc
Confidence 44678899999999999999999997655 57988666 899999999999874
No 63
>2cri_A Vesicle-associated membrane protein-associated protein A; VAP-A, VAP-33, beta sandwitch fold, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=58.26 E-value=15 Score=33.31 Aligned_cols=52 Identities=10% Similarity=0.067 Sum_probs=43.8
Q ss_pred eEEEEEEEEEeCCCCeeEEEEEeCCCCcEEEEecCeEEEeecCeeEEEEEEEEee
Q 044578 683 ALTLRRTVTNVGPPVSNYHVVVSPFKGVAIKVEPQKLHFTKKYQKLSYKITFTTK 737 (769)
Q Consensus 683 ~~~~~~tv~n~~~~~~ty~~~v~~~~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~ 737 (769)
..+-.++|+|.++...-|++..++|.-.. |.|..=.+ +++++..+.|++.+.
T Consensus 32 ~~~~~l~L~N~s~~~VaFKVKTT~p~~y~--VrP~~GiI-~P~~s~~v~V~l~~~ 83 (147)
T 2cri_A 32 VVTTNLKLQNPSDRKVCFKVKTTAPRRYC--VRPNSGII-DPGSIVTVSVMLQPF 83 (147)
T ss_dssp CCCEEEEEECCSSSCEEEEEEESCTTSEE--EESSEEEC-CTTCEEEEEEEECCC
T ss_pred eEEEEEEEECCCCCcEEEEEECCCCccEE--EcCCCcEE-CCCCeEEEEEEECCC
Confidence 45677899999999999999999998665 56887666 899999999999874
No 64
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=55.13 E-value=53 Score=36.99 Aligned_cols=87 Identities=9% Similarity=0.005 Sum_probs=53.8
Q ss_pred CcCceeeeccCCCcceeEEEEEEEEEeCCCCeeE-EEEEeCCCCcEEEEecCeEEEeecCeeEEEEEEEEeeCC-CCCcE
Q 044578 667 NYPAISVVFPETANVSALTLRRTVTNVGPPVSNY-HVVVSPFKGVAIKVEPQKLHFTKKYQKLSYKITFTTKSP-ETIPE 744 (769)
Q Consensus 667 n~ps~~~~~~~~~~~~~~~~~~tv~n~~~~~~ty-~~~v~~~~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~-~~~~~ 744 (769)
..|.+++... .+.+++.+|+|-+..+..- ++++..|.+.+++. ....+ ++|++.+++++|+.+.. ..+.+
T Consensus 363 ~~~~~~~~~g-----~~~~~~~~vtn~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~g~~~t~~~~vt~~~~~~~g~y 434 (601)
T 1w8o_A 363 TIPDVALEPG-----QQVTVPVAVTNQSGIAVPKPSLQLDASPDWQVQG--SVEPL-MPGRQAKGQVTITVPAGTTPGRY 434 (601)
T ss_dssp ECCCEEECTT-----CEEEEEEEEECCSSSCBSSCEEEEECCTTSEEEE--EECCB-CTTCEEEEEEEEECCTTCCCEEE
T ss_pred cCccceecCC-----ceeEEEEEEECCCceeccCceEEEecCCCcEEec--ccccc-CCCCceEEEEEEecCCCCCCCcE
Confidence 4566666644 4789999999976543322 44567788988876 23445 68999999888888752 23344
Q ss_pred EEEEEEEcCceeEEeEE
Q 044578 745 FGGLIWKDGVHKVRSPI 761 (769)
Q Consensus 745 ~G~~~~~~~~~~v~~P~ 761 (769)
.=-+.+......+...+
T Consensus 435 ~l~~~~~~~~~~~s~~~ 451 (601)
T 1w8o_A 435 RVGATLRTSAGNASTTF 451 (601)
T ss_dssp EEEEEEEETTEEEEEEE
T ss_pred EeeEEEEecCceeEEEE
Confidence 43445554333333333
No 65
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=49.62 E-value=1.1e+02 Score=35.30 Aligned_cols=77 Identities=10% Similarity=-0.006 Sum_probs=44.8
Q ss_pred eeEEEEEEEEEeCCCCeeEEEE--EeCCCCc-----EEEEecCeEEEeecCeeEEEEEEEEeeCC------CCCcE--EE
Q 044578 682 SALTLRRTVTNVGPPVSNYHVV--VSPFKGV-----AIKVEPQKLHFTKKYQKLSYKITFTTKSP------ETIPE--FG 746 (769)
Q Consensus 682 ~~~~~~~tv~n~~~~~~ty~~~--v~~~~g~-----~v~v~p~~~~~~~~~~~~~~~vt~~~~~~------~~~~~--~G 746 (769)
...+++++|||+|+..-.--+. +..|.+. +--.-=+.+.+ ++||+++++++++.... .+.|+ .|
T Consensus 613 ~~~~vsv~VtNtG~~~G~EVvQlYv~~~~~~~~~P~k~L~gF~kv~L-~pGes~~V~~~l~~~~ls~~d~~~~~w~ve~G 691 (713)
T 3zyz_A 613 NVATVTVDIANSGQVTGAEVAQLYITYPSSAPRTPPKQLRGFAKLNL-TPGQSGTATFNIRRRDLSYWDTASQKWVVPSG 691 (713)
T ss_dssp EEEEEEEEEEECSSSCEEEEEEEEEECCTTSSSCCSCEEEEEEEEEE-CTTCEEEEEEEEEGGGGCEEETTTTEEEECCE
T ss_pred CeEEEEEEEEeCCCCccceeeeeeeecCCCCCCchhHHhhhccccee-CCCCeEEEEEEEcHHHeeeeecCCCeEEEcCc
Confidence 4689999999999865443333 3333221 11111223445 79999999999987651 12222 26
Q ss_pred EEEEE--cCceeEEe
Q 044578 747 GLIWK--DGVHKVRS 759 (769)
Q Consensus 747 ~~~~~--~~~~~v~~ 759 (769)
...+. ...+++|.
T Consensus 692 ~y~v~vG~sS~d~~l 706 (713)
T 3zyz_A 692 SFGISVGASSRDIRL 706 (713)
T ss_dssp EEEEEEESSSSCEEE
T ss_pred eEEEEEECCCCCcce
Confidence 66554 34555554
No 66
>3sd2_A Putative member of DUF3244 protein family; immunoglobulin-like beta-sandwich, structural genomics, JOIN for structural genomics; HET: MSE; 1.40A {Bacteroides thetaiotaomicron}
Probab=47.49 E-value=58 Score=27.38 Aligned_cols=66 Identities=18% Similarity=0.027 Sum_probs=45.7
Q ss_pred ceeeeccCCCcceeEEEEEEEEEeCCCCeeEEEEEeCCCCcEEEEecCeEEEeecCeeEEEEEEEEeeCCCCCcEEEEEE
Q 044578 670 AISVVFPETANVSALTLRRTVTNVGPPVSNYHVVVSPFKGVAIKVEPQKLHFTKKYQKLSYKITFTTKSPETIPEFGGLI 749 (769)
Q Consensus 670 s~~~~~~~~~~~~~~~~~~tv~n~~~~~~ty~~~v~~~~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~~~~~~~G~~~ 749 (769)
-++|.|.+. .-.+++||+|.......|.-....|.-+.+ .+ ...++-+++|.+..+ ..++.|...
T Consensus 35 vlsV~F~~~----~~~vTItItNe~TG~~VYs~~~s~p~~i~I-------dL-nge~sG~Y~IeI~~~---~~~LtG~F~ 99 (101)
T 3sd2_A 35 ILNVSFGRA----KDYAIITVTNKATGEIVHSKTYHNTSIVMI-------DM-SSCEKGEYTIHIILN---DCLLEGTFT 99 (101)
T ss_dssp EEEEEESSC----CSCEEEEEEETTTCCEEEEEEESSCSEEEE-------EC-TTSCSEEEEEEEEET---TEEEEEEEE
T ss_pred EEEEEeccC----CCcEEEEEEECCCCcEEEEEeccCCcEEEE-------Ec-CCCcCceEEEEEEeC---CcEEEEEEE
Confidence 566777743 456888999987778889988877543332 23 234588899999885 667777765
Q ss_pred E
Q 044578 750 W 750 (769)
Q Consensus 750 ~ 750 (769)
+
T Consensus 100 i 100 (101)
T 3sd2_A 100 V 100 (101)
T ss_dssp E
T ss_pred e
Confidence 4
No 67
>2kq1_A BH0266 protein; solution NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; NMR {Bacillus halodurans}
Probab=46.14 E-value=5.4 Score=34.94 Aligned_cols=54 Identities=19% Similarity=0.161 Sum_probs=34.5
Q ss_pred EEEEEEEEEeCCCCeeEEEEEe-CCCCcEEEEecCeEEEe-ecCeeEEEEEEEEee
Q 044578 684 LTLRRTVTNVGPPVSNYHVVVS-PFKGVAIKVEPQKLHFT-KKYQKLSYKITFTTK 737 (769)
Q Consensus 684 ~~~~~tv~n~~~~~~ty~~~v~-~~~g~~v~v~p~~~~~~-~~~~~~~~~vt~~~~ 737 (769)
..+.+-++|.+....+..+.++ .|.|++++++|..++++ ....+++|.|++...
T Consensus 55 i~~~vDLs~l~~G~~~vpv~v~~lp~~v~v~v~P~~V~V~i~~~~~k~~pV~v~~~ 110 (119)
T 2kq1_A 55 YEVFVDLTEAGEGSHTVDVEHRGFPGDLAVTVEPRMARVQLEERQTVSVPVTVEMI 110 (119)
T ss_dssp CEEEEECTTCCBEEEEEECEEESSCTTSEEEESCCEEEEEEESCCCCCCCCCCCCC
T ss_pred EEEEEECccCCCCeEEEEEEEecCCCCeEEEEcCCEEEEEEEEEEEEEEEEEEEEC
Confidence 3444445555543344445566 68899999999987765 344567777776654
No 68
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=41.73 E-value=1.1e+02 Score=26.60 Aligned_cols=54 Identities=9% Similarity=0.115 Sum_probs=37.4
Q ss_pred eeEEEEEEEEEeCCCCee--------EEEEEeCCCCcEEE---------EecCeEEEeecCeeEEEEEEEEe
Q 044578 682 SALTLRRTVTNVGPPVSN--------YHVVVSPFKGVAIK---------VEPQKLHFTKKYQKLSYKITFTT 736 (769)
Q Consensus 682 ~~~~~~~tv~n~~~~~~t--------y~~~v~~~~g~~v~---------v~p~~~~~~~~~~~~~~~vt~~~ 736 (769)
....++++|+|.++.+.+ |.+.+....|-.|- -.....++ ++||+++|+++++.
T Consensus 18 ~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl-~pGE~~~f~~~w~~ 88 (120)
T 3isy_A 18 EQIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTL-ESGETYDFSDVWKE 88 (120)
T ss_dssp SCEEEEEEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEE-CTTCEEEEEEEESS
T ss_pred CeEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEE-CCCCEEEEEEEeCC
Confidence 578999999999986544 55556554553332 12334667 79999999999983
No 69
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=41.30 E-value=87 Score=32.89 Aligned_cols=65 Identities=12% Similarity=0.071 Sum_probs=41.3
Q ss_pred eeEEEEEEEEEeCCCCee---EE-EEE--eC----------C------CCcEEEEecCeEEEeecCeeEEEEEEEEeeC-
Q 044578 682 SALTLRRTVTNVGPPVSN---YH-VVV--SP----------F------KGVAIKVEPQKLHFTKKYQKLSYKITFTTKS- 738 (769)
Q Consensus 682 ~~~~~~~tv~n~~~~~~t---y~-~~v--~~----------~------~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~~- 738 (769)
.+.+++++|||.|+++.. |. +.+ .. | .|++ +|+ -+ .+||+++++|+++-..
T Consensus 298 R~l~~~~~VtN~g~~pvrlgeF~tA~vrFlnp~v~~~~~~~p~~l~a~~GL~---s~~--pI-~PGETrt~~V~a~da~W 371 (419)
T 3rfr_A 298 RELTINVKVKNGTSQPVRLGEYTAAGLRFLNPTVFTQKPDFPDYLLADRGLS---NDD--VI-APGESKEIVVKIQDARW 371 (419)
T ss_dssp SEEEEEEEEECCSSSCBEEEEEECSSCEEECTTTCSSCCCCCTTTEESCCCC---CCC--CB-CTTCEEEEEEEEECHHH
T ss_pred cEEEEEEEEecCCCCceEEeeEEEccEEEeCcccccCCCCCchhhhhccCCC---CCC--Cc-CCCcceEEEEEeehHHH
Confidence 588999999999998753 22 111 11 1 2444 566 45 7999999998887543
Q ss_pred ----------CCCCcEEEEEEEEc
Q 044578 739 ----------PETIPEFGGLIWKD 752 (769)
Q Consensus 739 ----------~~~~~~~G~~~~~~ 752 (769)
..++..-|-|.|.|
T Consensus 372 eveRL~~l~~D~dSrfgGLLfF~d 395 (419)
T 3rfr_A 372 DIERLSDLAYDTDSQVGGLLFFFT 395 (419)
T ss_dssp HHTTGGGGGGSSSCEEEEEEEEEC
T ss_pred HHHHHhhhhcCchhheeEEEEEEc
Confidence 12444555555665
No 70
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=39.18 E-value=75 Score=37.57 Aligned_cols=45 Identities=22% Similarity=0.161 Sum_probs=35.8
Q ss_pred ceeeeccccchhhhhHHHHHHHHhhCCCCC-HHHHHHHHHhccccc
Q 044578 542 KFNILSGTSMSCPHVSGIAALLKARHPEWS-PAAIKSALMTTAYVH 586 (769)
Q Consensus 542 ~y~~~sGTSmAaP~VAG~aALl~q~~p~ls-p~~ik~~L~~TA~~~ 586 (769)
-...++|..++-|-+--+.|+|..++|.-- ...|-++|.--..|-
T Consensus 618 VVVl~sG~pv~m~w~~~v~AIL~aw~pGqegG~AiAdVLfG~vNPS 663 (845)
T 3abz_A 618 VIVNQSGTPVEFPWLEDANALVQAWYGGNELGNAIADVLYGDVVPN 663 (845)
T ss_dssp EEEEECSSCCCCTTGGGCSEEEECCCCCTTHHHHHHHHHTTSSCCC
T ss_pred EEEEeCCCcccCcchhccCeEEEcCCCcHHHHHHHHHHhcCCcCCC
Confidence 456788998888988888999999999876 577888887766554
No 71
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=39.04 E-value=27 Score=40.63 Aligned_cols=56 Identities=11% Similarity=0.096 Sum_probs=33.8
Q ss_pred eeEEEEEEEEEeCCCCeeEEEE--EeCCCC-c----EEEEecCeE-EEeecCeeEEEEEEEEeeC
Q 044578 682 SALTLRRTVTNVGPPVSNYHVV--VSPFKG-V----AIKVEPQKL-HFTKKYQKLSYKITFTTKS 738 (769)
Q Consensus 682 ~~~~~~~tv~n~~~~~~ty~~~--v~~~~g-~----~v~v~p~~~-~~~~~~~~~~~~vt~~~~~ 738 (769)
...+++++|||+|+..-.-.+. +..|.+ + +--.-=+.+ .+ ++||+++++++|+...
T Consensus 615 ~~~~v~v~VtNtG~~~G~eVvQlYv~~~~~~~~~P~k~L~gF~kv~~L-~pGes~~V~~~l~~~~ 678 (721)
T 2x41_A 615 ETLRVQYRIENTGGRAGKEVSQVYIKAPKGKIDKPFQELKAFHKTRLL-NPGESEEVVLEIPVRD 678 (721)
T ss_dssp SEEEEEEEEEECSSSCBCCEEEEEEECCCSSSCCCSCEEEEEEECCCB-CTTCEEEEEEEEEGGG
T ss_pred CeEEEEEEEEECCCCCCcEEeeEEEccCCCCCCCchHHhhcccccccC-CCCCeEEEEEEECHHH
Confidence 4689999999999864332222 333322 1 100111123 34 7999999999998765
No 72
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=37.77 E-value=63 Score=33.56 Aligned_cols=52 Identities=17% Similarity=0.208 Sum_probs=34.8
Q ss_pred eeEEEEEEEEEeCCCCee---EE-EEE---e---------CC------CCcEEEEecCeEEEeecCeeEEEEEEEEee
Q 044578 682 SALTLRRTVTNVGPPVSN---YH-VVV---S---------PF------KGVAIKVEPQKLHFTKKYQKLSYKITFTTK 737 (769)
Q Consensus 682 ~~~~~~~tv~n~~~~~~t---y~-~~v---~---------~~------~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~ 737 (769)
.+.+++++|||.|+++.. |. +.+ . -| .|+ +|+|++- + ++||++++.|+++-.
T Consensus 264 R~l~~~~~VtN~g~~pvrlgeF~tA~vrFln~~~~~~~~~~P~~lla~~gL--~vsd~~p-I-~PGETr~~~v~a~da 337 (382)
T 1yew_A 264 RAMRMKLTITNHGNSPIRLGEFYTASVRFLDSDVYKDTTGYPEDLLAEDGL--SVSDNSP-L-APGETRTVDVTASDA 337 (382)
T ss_dssp SEEEEEEEEEECSSSCEEEEEEECSSCEEECTTTCCCCSCCCGGGEETTCE--EESCCSC-B-CTTCEEEEEEEEECH
T ss_pred cEEEEEEEEEcCCCCceEeeeEEeccEEEeCCcccccCCCChHHhhccCCc--eeCCCCC-c-CCCceeEEEEEeehH
Confidence 588999999999998643 22 111 0 12 244 5666652 3 799999999888754
No 73
>1wgl_A TOLL-interacting protein; CUE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, immune system; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=37.39 E-value=26 Score=26.44 Aligned_cols=36 Identities=17% Similarity=0.081 Sum_probs=27.6
Q ss_pred ccchhhhhHHHHHHHHhhCCCCCHHHHHHHHHhccc
Q 044578 549 TSMSCPHVSGIAALLKARHPEWSPAAIKSALMTTAY 584 (769)
Q Consensus 549 TSmAaP~VAG~aALl~q~~p~lsp~~ik~~L~~TA~ 584 (769)
.|-..|..--....|++.||+++...|+..|...-.
T Consensus 2 ~~~~~~~~ee~l~~L~emFP~ld~~~I~~vL~a~~g 37 (59)
T 1wgl_A 2 SSGSSGCSEEDLKAIQDMFPNMDQEVIRSVLEAQRG 37 (59)
T ss_dssp CSCSSSSCHHHHHHHHHHCSSSCHHHHHHHHTTTTT
T ss_pred CCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHcCC
Confidence 344444555667889999999999999999987643
No 74
>4ep8_B Urease subunit beta; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1a5l_B 1a5k_B 1a5n_B 1a5o_B 1ef2_B* 1ejr_B* 1ejs_B* 1ejt_B* 1eju_B* 1ejv_B* 1a5m_B* 1ejw_B* 1ejx_B* 4epb_B* 4epd_B* 4epe_B* 1fwa_B* 1fwb_B* 1fwc_B* 1fwd_B* ...
Probab=33.09 E-value=56 Score=27.24 Aligned_cols=51 Identities=24% Similarity=0.303 Sum_probs=28.2
Q ss_pred eeEEEEEEEEEeCCCCee----EEEE-E--------eCCCCcEEEEe-cCeEEEeecCeeEEEEEE
Q 044578 682 SALTLRRTVTNVGPPVSN----YHVV-V--------SPFKGVAIKVE-PQKLHFTKKYQKLSYKIT 733 (769)
Q Consensus 682 ~~~~~~~tv~n~~~~~~t----y~~~-v--------~~~~g~~v~v~-p~~~~~~~~~~~~~~~vt 733 (769)
+..+++++|+|.||.+.. |+.- + ...-|.-+.+. -..+.| ++|+++++++.
T Consensus 18 gr~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRF-EPG~~r~V~LV 82 (101)
T 4ep8_B 18 GRATCRVVVENHGDRPIQVGSHYHFAEVNPALKFDRQQAAGYRLNIPAGTAVRF-EPGQKREVELV 82 (101)
T ss_dssp TCCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCTTTTTTEEECSSTTCEEEE-CTTCEEEEEEE
T ss_pred CCCEEEEEEEeCCCcceEEccccChhHcCcceeecHhhccCceecccCCCeEee-CCCCeEEEEEE
Confidence 356789999999997632 2210 0 11123333321 113567 78998886553
No 75
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=29.64 E-value=1.6e+02 Score=25.26 Aligned_cols=23 Identities=22% Similarity=0.378 Sum_probs=17.1
Q ss_pred eeEEEEEEEEEeCCCC-eeEEEEE
Q 044578 682 SALTLRRTVTNVGPPV-SNYHVVV 704 (769)
Q Consensus 682 ~~~~~~~tv~n~~~~~-~ty~~~v 704 (769)
...+++.+|+|.|... ..+.+..
T Consensus 19 ~~~ti~atVkN~G~~~a~~~~V~l 42 (114)
T 2l0d_A 19 TVNTMTATIENQGNKDSTSFNVSL 42 (114)
T ss_dssp SEEEEEEEEEECSSSCBCCEEEEE
T ss_pred CeEEEEEEEEECCCCCCCCEEEEE
Confidence 5889999999999753 3455554
No 76
>4ac7_B Urease subunit beta; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_B* 3ubp_B* 1ie7_B* 4ubp_B* 1ubp_B* 2ubp_B*
Probab=28.48 E-value=69 Score=27.85 Aligned_cols=17 Identities=18% Similarity=0.063 Sum_probs=13.5
Q ss_pred eeEEEEEEEEEeCCCCe
Q 044578 682 SALTLRRTVTNVGPPVS 698 (769)
Q Consensus 682 ~~~~~~~tv~n~~~~~~ 698 (769)
+..+++++|+|.||.+.
T Consensus 24 gr~~~~l~V~NtGDRPI 40 (126)
T 4ac7_B 24 GREKTTIRVSNTGDRPI 40 (126)
T ss_dssp TSCEEEEEEEECSSSCE
T ss_pred CCcEEEEEEEeCCCCCE
Confidence 35578999999999763
No 77
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B*
Probab=28.48 E-value=69 Score=27.85 Aligned_cols=17 Identities=18% Similarity=0.063 Sum_probs=13.5
Q ss_pred eeEEEEEEEEEeCCCCe
Q 044578 682 SALTLRRTVTNVGPPVS 698 (769)
Q Consensus 682 ~~~~~~~tv~n~~~~~~ 698 (769)
+..+++++|+|.||.+.
T Consensus 24 gr~~~~l~V~NtGDRPI 40 (126)
T 4ubp_B 24 GREKTTIRVSNTGDRPI 40 (126)
T ss_dssp TSCEEEEEEEECSSSCE
T ss_pred CCcEEEEEEEeCCCCCE
Confidence 35578999999999763
No 78
>1ni7_A ER75, hypothetical protein YGDK; RD-structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Escherichia coli} SCOP: d.224.1.1
Probab=27.49 E-value=41 Score=30.80 Aligned_cols=34 Identities=21% Similarity=0.186 Sum_probs=27.9
Q ss_pred eeeccccchhhhhHHHHHHHHhhCCCCCHHHHHHH
Q 044578 544 NILSGTSMSCPHVSGIAALLKARHPEWSPAAIKSA 578 (769)
Q Consensus 544 ~~~sGTSmAaP~VAG~aALl~q~~p~lsp~~ik~~ 578 (769)
..+.|-| =|++|-|++|||.+.+-..||+||.+.
T Consensus 77 l~F~adS-DA~IvkGL~AlL~~~~~G~tp~eIl~~ 110 (155)
T 1ni7_A 77 MHFFGDS-EGRIVRGLLAVLLTAVEGKTAAELQAQ 110 (155)
T ss_dssp CCCEEEE-SSHHHHHHHHHHHHHTTTCCHHHHHHS
T ss_pred EEEeeCC-ccHHHHHHHHHHHHHHcCCCHHHHHhC
Confidence 3344555 479999999999999999999998754
No 79
>3q48_A Chaperone CUPB2; IG fold, periplasmic chaperone; 2.50A {Pseudomonas aeruginosa}
Probab=25.03 E-value=3.5e+02 Score=26.71 Aligned_cols=52 Identities=12% Similarity=0.114 Sum_probs=37.5
Q ss_pred eEEEEEEEEEeCCCCeeEEEE--EeCCC--------CcEEEEecCeEEEeecCeeEEEEEEEEee
Q 044578 683 ALTLRRTVTNVGPPVSNYHVV--VSPFK--------GVAIKVEPQKLHFTKKYQKLSYKITFTTK 737 (769)
Q Consensus 683 ~~~~~~tv~n~~~~~~ty~~~--v~~~~--------g~~v~v~p~~~~~~~~~~~~~~~vt~~~~ 737 (769)
....+++|+|.++. .|.+. ++... ...+.|+|..+.+ ++|+++.++|.....
T Consensus 43 ~k~~sl~l~N~~~~--P~LvQsWid~~~~~~~p~~~~~pfivtPPl~rl-~pg~~q~lRI~~~~~ 104 (257)
T 3q48_A 43 EREVTLRVSNTSGT--PVLAQAWIDDGRQDVPPEELQVPFSVTPAVTRV-EPNGGAVLRIAYLKA 104 (257)
T ss_dssp CSEEEEEEEECSSS--CEEEEEEEESSCCSSCGGGGCCSEEEESSEEEE-CTTEEEEEEEEECCC
T ss_pred CcEEEEEEEeCCCC--eEEEEEEEEcCCCccCcccccCCEEEcCCEEEE-CCCCceEEEEEECCC
Confidence 44688899998875 45544 33321 2348899999999 799999999976654
No 80
>3g0m_A Cysteine desulfuration protein SUFE; YNHA, csgid, national I of allergy and infectious diseases, niaid, hydrolase, struc genomics; 1.76A {Salmonella typhimurium LT2} SCOP: d.224.1.1 PDB: 1mzg_A
Probab=23.39 E-value=39 Score=30.39 Aligned_cols=33 Identities=21% Similarity=0.197 Sum_probs=28.2
Q ss_pred eeeccccchhhhhHHHHHHHHhhCCCCCHHHHHH
Q 044578 544 NILSGTSMSCPHVSGIAALLKARHPEWSPAAIKS 577 (769)
Q Consensus 544 ~~~sGTSmAaP~VAG~aALl~q~~p~lsp~~ik~ 577 (769)
..+.|-| =|++|-|++||+.+.+-..+|+||.+
T Consensus 70 l~f~adS-DA~IvkGl~alL~~~~~G~tp~eIl~ 102 (141)
T 3g0m_A 70 IELQGDS-DAAIVKGLMAVVFILYHQMTAQDIVH 102 (141)
T ss_dssp EEEEEEE-SSHHHHHHHHHHHHHHTTCBHHHHHH
T ss_pred EEEEecC-ccHHHHHHHHHHHHHHcCCCHHHHHh
Confidence 4556777 47999999999999999999999874
No 81
>3ndz_E Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_E*
Probab=22.58 E-value=3.5e+02 Score=22.78 Aligned_cols=31 Identities=13% Similarity=0.109 Sum_probs=23.6
Q ss_pred eEEEEEEEEEeCCCCe-eEEEEEeCCCCcEEE
Q 044578 683 ALTLRRTVTNVGPPVS-NYHVVVSPFKGVAIK 713 (769)
Q Consensus 683 ~~~~~~tv~n~~~~~~-ty~~~v~~~~g~~v~ 713 (769)
-.+.+++|+|.+..+. .|+++.+-|.|.+|+
T Consensus 16 Gf~~~vtVtN~g~~~i~gWtv~~~~p~g~~it 47 (107)
T 3ndz_E 16 GASVNVTIKNNGTTPINGWTLKWTMPINQTIT 47 (107)
T ss_dssp EEEEEEEEEECSSSCEESCEEEEECCTTEEEE
T ss_pred CEEEEEEEEeCCCCcccCcEEEEEcCCCCEEe
Confidence 4678889999987654 599998888776554
No 82
>3hrz_B Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_G* 3hs0_B*
Probab=20.93 E-value=2.2e+02 Score=27.96 Aligned_cols=66 Identities=14% Similarity=0.059 Sum_probs=42.0
Q ss_pred CCCcCceeeeccCCCcceeEEEEEEEEEeCCCCeeEEEEEeCCCCcEEEEe-----cCeEEEeecCeeEEEEEEEEee
Q 044578 665 DLNYPAISVVFPETANVSALTLRRTVTNVGPPVSNYHVVVSPFKGVAIKVE-----PQKLHFTKKYQKLSYKITFTTK 737 (769)
Q Consensus 665 ~ln~ps~~~~~~~~~~~~~~~~~~tv~n~~~~~~ty~~~v~~~~g~~v~v~-----p~~~~~~~~~~~~~~~vt~~~~ 737 (769)
++|+|...+. + ....+..+|.|..+.....++.....+++..... ..++.+ ++++++++...+.+.
T Consensus 85 ~~~LP~sv~r-G-----E~~~l~~~V~Ny~~~~~~v~V~l~~~~~~~~~~~~~~~~~~~v~v-~a~~~~~v~f~i~p~ 155 (252)
T 3hrz_B 85 DLQMPYSVVK-N-----EQVEIRAILHNYVNEDIYVRVELLYNPAFCSASTKGQRYRQQFPI-KALSSRAVPFVIVPL 155 (252)
T ss_dssp EECCCSCEET-T-----CCEEEEEEEEECSSSCEEEEEEECCCTTEEESCCSSCCEEEEEEE-CTTEEEEEEEEEEEC
T ss_pred EcCCCcEEee-C-----CEEEEEEEEEcccCceEEEEEEEEcCCceEeecCCCCceEEEEEE-CCCCeEEEEEEEEec
Confidence 4688875533 2 4678999999998887777777766554433211 122555 567777777666653
Done!