BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044580
(269 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P36151|YK50_YEAST Uncharacterized protein YKR070W OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=YKR070W PE=1 SV=1
Length = 352
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 113/224 (50%), Gaps = 19/224 (8%)
Query: 50 QSQRPSFGIAFDIDGVVLLGNTPIGGSNKALKRLYQHSGDLRIPYIFLTNGGGFRESKRA 109
Q+ AFDIDGV+ G PI G++ ALK L ++ +IPYI LTNGGGF E R
Sbjct: 8 QTTSKKIAFAFDIDGVLFRGKKPIAGASDALKLLNRN----KIPYILLTNGGGFSERART 63
Query: 110 TELSKLLGVNILPCQVVQGHSPFKQLFNRFENEFIVAVGKGEPAAVMAEYGFKNVLSIDE 169
+S L V++ P Q++Q H+P+K L N++ I+AVG V YGF++V+ +
Sbjct: 64 EFISSKLDVDVSPLQIIQSHTPYKSLVNKYSR--ILAVGTPSVRGVAEGYGFQDVVHQTD 121
Query: 170 YASYFDGIDPLAQYKKWNIKHAASENSTFKEMAPTICSQRVQAAFIVSDSVDWSRDIQVL 229
Y I P + + + + P + +++ A + +D DW+ DIQ++
Sbjct: 122 IVRYNRDIAPFSGLSDEQVMEYSRD-------IPDLTTKKFDAVLVFNDPHDWAADIQII 174
Query: 230 CDILRT-GGLPG---RETGHQPH--LYFANDDLEYQVLLKLGYF 267
D + + G+ E +P +YF+N DL + KL F
Sbjct: 175 SDAINSENGMLNTLRNEKSGKPSIPIYFSNQDLLWANPYKLNRF 218
>sp|Q9BXW7|CECR5_HUMAN Cat eye syndrome critical region protein 5 OS=Homo sapiens GN=CECR5
PE=1 SV=1
Length = 423
Score = 107 bits (268), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 116/232 (50%), Gaps = 17/232 (7%)
Query: 40 ASRSFSQLSSQSQRPSFGIAFDIDGVVLLGNTPIGGSNKALKRLYQHSGDLRIPYIFLTN 99
A R ++ +QS P+FG DIDGV++ G+ I + KA +RL G LR+P +F+TN
Sbjct: 32 ARRCYAVGPAQSP-PTFGFLLDIDGVLVRGHRVIPAALKAFRRLVNSQGQLRVPVVFVTN 90
Query: 100 GGGFRESKRATELSKLLGVNILPCQVVQGHSPFKQLFNRFENEFIVAVGKGEPAAVMAEY 159
G + +A ELS LLG + QV+ HSP K LF+ + + ++ G+G
Sbjct: 91 AGNILQHSKAQELSALLGCEVDADQVILSHSPMK-LFSEYHEKRMLVSGQGPVMENAQGL 149
Query: 160 GFKNVLSIDEYASYFDGIDPLAQYKKWNIKHAASENSTFKEMAPTICSQRVQAAFIVSDS 219
GF+NV+++DE F +D + ++ +K + F R++ ++ +
Sbjct: 150 GFRNVVTVDELRMAFPLLDMVDLERR--LKTTPLPRNDFP---------RIEGVLLLGEP 198
Query: 220 VDWSRDIQVLCDILRTGGLPGR--ETGHQPHL--YFANDDLEYQVLLKLGYF 267
V W +Q++ D+L + G PG T PHL +N DL + K+ F
Sbjct: 199 VRWETSLQLIMDVLLSNGSPGAGLATPPYPHLPVLASNMDLLWMAEAKMPRF 250
>sp|Q91WM2|CECR5_MOUSE Cat eye syndrome critical region protein 5 homolog OS=Mus musculus
GN=Cecr5 PE=2 SV=1
Length = 419
Score = 104 bits (259), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 112/223 (50%), Gaps = 17/223 (7%)
Query: 49 SQSQRPSFGIAFDIDGVVLLGNTPIGGSNKALKRLYQHSGDLRIPYIFLTNGGGFRESKR 108
S + P+FG+ FDIDGV++ G+ I + +A +L G LR+P +F+TN G + +
Sbjct: 40 SAERSPTFGLLFDIDGVLVRGHRVIPAALEAFSKLVNSQGQLRVPVVFVTNAGNILQHNK 99
Query: 109 ATELSKLLGVNILPCQVVQGHSPFKQLFNRFENEFIVAVGKGEPAAVMAEYGFKNVLSID 168
A ELS LL + P QV+ HSP K LF ++ ++ ++ G+G GF+NV++ID
Sbjct: 100 AQELSDLLRCKVDPDQVILSHSPMK-LFLQYHSKQMLVSGQGPLVENARALGFQNVVTID 158
Query: 169 EYASYFDGIDPLAQYKKWNIKHAASENSTFKEMAPTICSQRVQAAFIVSDSVDWSRDIQV 228
E F +D + ++ + + P I + ++ + V W ++Q+
Sbjct: 159 ELRLAFPELDMVDLQRR-------PKTMRLRSDFPAI-----EGVLLLGEPVRWETNLQL 206
Query: 229 LCDILRTGGLPGR--ETGHQPHL--YFANDDLEYQVLLKLGYF 267
+ D+L + G PG T PHL +N DL + K+ F
Sbjct: 207 IMDVLLSNGHPGTGLATAPYPHLPVLASNMDLLWMAEAKMPRF 249
>sp|O13899|YF38_SCHPO Uncharacterized CDP-alcohol phosphatidyltransferase class-I family
protein C22A12.08c OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=SPAC22A12.08c PE=3 SV=1
Length = 570
Score = 87.0 bits (214), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 112/226 (49%), Gaps = 22/226 (9%)
Query: 38 STASRSFSQLSSQSQRPSFGIAFD-IDGVVLLGNTPIGGSNKALKRLYQHSGDLRIPYIF 96
ST + ++ S++S AFD IDGV++ G + K LK L +++ IP+I
Sbjct: 20 STFRKFTTESSTKSPIADVCFAFDSIDGVLIRGGRGLKEGTKTLKFLQKNN----IPFIL 75
Query: 97 LTNGGGFRESKRATELSKLLGVNILPCQVVQGHSPFKQLFNRFENEFIVAVGKGEPAAVM 156
LTNGGG ES RA LSK L V++ Q H+PF+ L +++++ ++ GK
Sbjct: 76 LTNGGGMHESVRAQRLSKTLSVSLTEDDFCQSHTPFRALADKYKHVLVLG-GKDNSVRET 134
Query: 157 AE-YGFKNVLS-IDEYASYFDGIDPLAQYKKWNIKHAASENSTFKEMAPTICSQRVQAAF 214
AE YGFK+V++ +D A P + + +IK A + T + ++A F
Sbjct: 135 AEKYGFKSVINELDVIAKLGTPFWPFTSFNEEDIKDAKDFDVT----------RPIEAVF 184
Query: 215 IVSDSVDWSRDIQVLCDILRTG----GLPGRETGHQPHLYFANDDL 256
D V D+Q++ ++ ++ G + P +YF+N DL
Sbjct: 185 TYVDPVRLGLDLQLVMELGQSKNGVLGTVSKTANEGPDIYFSNADL 230
>sp|A3LZG5|SLX1_PICST Structure-specific endonuclease subunit SLX1 OS=Scheffersomyces
stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 /
NRRL Y-11545) GN=SLX1 PE=3 SV=2
Length = 336
Score = 36.2 bits (82), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 6/62 (9%)
Query: 49 SQSQRPSFGIAFDIDGVVLLGNTP------IGGSNKALKRLYQHSGDLRIPYIFLTNGGG 102
+QS P+ + GV LL + P IG + +RL QH+GDL+ + T G
Sbjct: 9 TQSDTPALHVVPSFYGVYLLQSEPKPSSFYIGSTPDPPRRLRQHNGDLKAGGAYRTKRAG 68
Query: 103 FR 104
FR
Sbjct: 69 FR 70
>sp|P94526|ARAL_BACSU Arabinose operon protein AraL OS=Bacillus subtilis (strain 168)
GN=araL PE=2 SV=1
Length = 272
Score = 35.0 bits (79), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Query: 57 GIAFDIDGVVLLGNTPIGGSNKALKRLYQHSGDLRIPYIFLTNGGGFRESKRATELSKLL 116
GI D+DG V GN I G+ +A+K L + + +FL+N G RA KLL
Sbjct: 15 GILIDLDGTVFRGNELIEGAREAIKTLRRMGKKI----VFLSNRGNI---SRAMCRKKLL 67
Query: 117 GVNI 120
G I
Sbjct: 68 GAGI 71
>sp|P46351|YTH1_PANTH Uncharacterized 45.4 kDa protein in thiaminase I 5'region
OS=Paenibacillus thiaminolyticus PE=4 SV=1
Length = 413
Score = 33.9 bits (76), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 60 FDIDGVVLLGNTPIGGSNKALKRLYQHSGDLRIPYIFLTNGGGFRESKRATELSKL 115
FD+DGV+ +G + G+ +AL+RL +R FLTN + A L++L
Sbjct: 11 FDLDGVIYVGPEALPGAVEALERLRSGGKTIR----FLTNNPCMTREQTAARLNRL 62
>sp|Q9WVX8|RSBV_STRCO Anti-sigma-B factor antagonist OS=Streptomyces coelicolor (strain
ATCC BAA-471 / A3(2) / M145) GN=rsbV PE=1 SV=1
Length = 113
Score = 32.3 bits (72), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 27/54 (50%)
Query: 39 TASRSFSQLSSQSQRPSFGIAFDIDGVVLLGNTPIGGSNKALKRLYQHSGDLRI 92
TA + QL SF + D++GV L +T +G LKR+ H G LR+
Sbjct: 26 TAPKLREQLVELVNDGSFHLVVDMEGVDFLDSTGLGVLVGGLKRVRAHEGSLRL 79
>sp|Q9SJH7|CISY3_ARATH Citrate synthase 3, peroxisomal OS=Arabidopsis thaliana GN=CSY3
PE=1 SV=1
Length = 509
Score = 32.3 bits (72), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 145 VAVGKGEPAAVMAEYGFKNVLSIDEYASYFDGIDPLAQYKKWNIKHAASENSTFKEMA 202
+ GK + + + G+ N + SY DG + + +Y+ + I+ A ENSTF E+A
Sbjct: 78 IVTGKEDKGLKLYDPGYLNTAPVRSSISYIDGDEGILRYRGYPIEEMA-ENSTFLEVA 134
>sp|Q8MQU6|CISYP_DICDI Citrate synthase, peroxisomal OS=Dictyostelium discoideum GN=cshA
PE=2 SV=1
Length = 492
Score = 32.0 bits (71), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 147 VGKGEPAAVMAEYGFKNVLSIDEYASYFDGIDPLAQYKKWNIKHAASENSTFKEMA 202
+ KG+ ++ + GF+N + Y +Y DG + +Y+ + I+ A E S F E+A
Sbjct: 68 LAKGDGGLMIYDPGFQNTAVVTSYITYIDGDKGILRYRGYPIEELA-ERSNFLEVA 122
>sp|Q6BZG7|KAPR_DEBHA cAMP-dependent protein kinase regulatory subunit OS=Debaryomyces
hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC
0083 / IGC 2968) GN=PKAR PE=3 SV=2
Length = 452
Score = 31.2 bits (69), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 54/130 (41%), Gaps = 26/130 (20%)
Query: 111 ELSKLLGVNILPCQVVQGHSPFKQLFNRFENEFIVAVGKGEPAAVMAEYGFKN---VLSI 167
ELSK LG N L F+QL + I A+GK E FKN ++
Sbjct: 203 ELSKTLGSNFL----------FRQLDVSSKKTVIEALGKKE---------FKNGDEIIKQ 243
Query: 168 DEYASYFDGIDP--LAQYKKWNIKHAASENSTFKEMAPTICSQRVQAAFIVSDS--VDWS 223
+ YF I+ + Y N +++ E S+F E+A S R A SD+ W+
Sbjct: 244 GDEGDYFYIIEKGTVDFYVNGNQVNSSGEGSSFGELALMYNSPRAATAVAASDTGVTCWA 303
Query: 224 RDIQVLCDIL 233
D Q IL
Sbjct: 304 LDRQTFRRIL 313
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97,200,881
Number of Sequences: 539616
Number of extensions: 3941098
Number of successful extensions: 8578
Number of sequences better than 100.0: 12
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 8565
Number of HSP's gapped (non-prelim): 13
length of query: 269
length of database: 191,569,459
effective HSP length: 115
effective length of query: 154
effective length of database: 129,513,619
effective search space: 19945097326
effective search space used: 19945097326
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)