Query 044582
Match_columns 202
No_of_seqs 174 out of 535
Neff 4.6
Searched_HMMs 29240
Date Mon Mar 25 07:52:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044582.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044582hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vd2_A Protein kinase C, IOTA 96.5 0.0049 1.7E-07 45.9 6.0 57 93-166 7-63 (89)
2 1wmh_B Partitioning defective- 96.1 0.014 4.6E-07 43.4 6.3 70 92-177 6-76 (86)
3 2kkc_A Sequestosome-1; P62, PB 95.5 0.024 8.3E-07 43.1 5.7 61 92-167 5-80 (102)
4 2ktr_A Sequestosome-1; autopha 95.5 0.03 1E-06 43.7 6.2 70 83-167 11-95 (117)
5 1q1o_A Cell division control p 89.9 0.91 3.1E-05 34.3 6.6 75 92-177 5-86 (98)
6 1oey_J P40-PHOX, neutrophil cy 84.5 1.4 4.8E-05 33.8 4.9 41 109-167 28-68 (107)
7 1oey_A P67-PHOX, neutrophil cy 83.7 4.6 0.00016 29.4 7.2 69 94-181 7-78 (83)
8 1pqs_A Cell division control p 83.4 1 3.5E-05 32.3 3.6 57 110-177 8-65 (77)
9 2bkf_A Zinc-finger protein NBR 80.9 5.3 0.00018 29.5 6.6 55 94-166 8-62 (87)
10 1wj6_A KIAA0049 protein, RSGI 78.1 5.6 0.00019 30.2 6.1 64 93-176 15-78 (101)
11 3o27_A Putative uncharacterize 68.7 1.6 5.3E-05 31.1 0.9 22 143-164 38-59 (68)
12 1e8p_A Endoglucanase, dockerin 65.3 1.8 6E-05 28.7 0.6 13 151-163 20-32 (46)
13 2npt_A Dual specificity mitoge 46.5 38 0.0013 25.6 5.3 57 93-166 15-72 (106)
14 2j4m_A Endoglucanase 45A; dock 41.7 7.1 0.00024 29.6 0.6 13 151-163 21-33 (100)
15 2kvv_A Putative excisionase; D 21.8 44 0.0015 24.1 1.9 46 80-128 27-72 (78)
16 2i1s_A Hypothetical protein; m 21.3 78 0.0027 25.2 3.6 37 92-128 8-46 (188)
No 1
>1vd2_A Protein kinase C, IOTA type; PB1 domain, OPCA motif, APKC, ZIP/P62, MEK5, molecular recognition, transferase; NMR {Homo sapiens} SCOP: d.15.2.2 PDB: 1wmh_A
Probab=96.54 E-value=0.0049 Score=45.90 Aligned_cols=57 Identities=26% Similarity=0.298 Sum_probs=44.0
Q ss_pred ceeEEEEcCcccceeecCCCcCCHHHHHHHHHHhhcccccccccchhhhhcccCCCceeeEEecCCCCeEEccC
Q 044582 93 KFVKVAVEGAPYLRKVDLEIYHSYQELLSALEDMFSFLTIRNHVNERKIIDNVNGVEYVPTYEDKDGDWMLVGD 166 (202)
Q Consensus 93 ~~VKV~mdG~pigRkVDL~~~~sY~eL~~~L~~MF~~~~i~~~~~e~~l~d~~~~~~~~ltYeD~dGDwmLVGD 166 (202)
.=|||+-.|.-+ .+.+..--+|++|...|.++|.. . .+..+++.|.|.|||+.-+-.
T Consensus 7 vkvK~~~~gdi~--~~~v~~~i~~~~L~~kv~~~~~~-~--------------~~~~f~lky~DEeGD~itisS 63 (89)
T 1vd2_A 7 VRVKAYYRGDIM--ITHFEPSISFEGLCNEVRDMCSF-D--------------NEQLFTMKWIDEEGDPCTVSS 63 (89)
T ss_dssp EEEEEESSSCEE--EEEECTTCCHHHHHHHHHHHTTC-C--------------SSCCEEEEECCSSSCCEECCS
T ss_pred EEEEEEeCCeEE--EEECCCCCCHHHHHHHHHHHhCC-C--------------CCCeEEEEEECCCCCcccccC
Confidence 568889999844 44444456999999999999992 1 235689999999999976654
No 2
>1wmh_B Partitioning defective-6 homolog alpha; kinase, PB1 domain, OPCA motif, APKC, cell polarity, transferase/cell cycle complex; 1.50A {Homo sapiens} SCOP: d.15.2.2
Probab=96.11 E-value=0.014 Score=43.43 Aligned_cols=70 Identities=16% Similarity=0.154 Sum_probs=51.7
Q ss_pred cceeEEEEcCcccceeecCCCcCCHHHHHHHHHHhhcccccccccchhhhhcccCCCceeeEEecCCCCeEEccCc-Chh
Q 044582 92 CKFVKVAVEGAPYLRKVDLEIYHSYQELLSALEDMFSFLTIRNHVNERKIIDNVNGVEYVPTYEDKDGDWMLVGDV-PWK 170 (202)
Q Consensus 92 ~~~VKV~mdG~pigRkVDL~~~~sY~eL~~~L~~MF~~~~i~~~~~e~~l~d~~~~~~~~ltYeD~dGDwmLVGDv-PW~ 170 (202)
..-||..-|..--=-.||-....+|++|..-|+++|.. . ...|++.|.|.|||++-+-.. -..
T Consensus 6 ~l~vKskf~aE~RRFs~d~~~~~~fe~f~~lv~~lh~L---~-------------~~~f~i~Y~D~dGDLlpInnDdnl~ 69 (86)
T 1wmh_B 6 IVEVKSKFDAEFRRFALPRASVSGFQEFSRLLRAVHQI---P-------------GLDVLLGYTDAHGDLLPLTNDDSLH 69 (86)
T ss_dssp EEEEEEEETTEEEEEEEEGGGCCCHHHHHHHHHHHTTC---T-------------TCCCEEEEECTTSCEEECCSHHHHH
T ss_pred EEEEEeecCCeeeEeEccCCCCCCHHHHHHHHHHHcCC---C-------------CCCEEEEEECCCCCEeeecCHHHHH
Confidence 35688888887433355556778999999999999982 1 245899999999999988765 333
Q ss_pred HHHhcce
Q 044582 171 MFVESCK 177 (202)
Q Consensus 171 ~Fv~svk 177 (202)
+=+.++|
T Consensus 70 ~Al~~a~ 76 (86)
T 1wmh_B 70 RALASGP 76 (86)
T ss_dssp HHTTSSS
T ss_pred HHHHhCC
Confidence 4445666
No 3
>2kkc_A Sequestosome-1; P62, PB1, autophagy, ubiquitin-proteasome system, NF-KB signaling, alternative splicing, apoptosis, cytoplasm, differentiation; NMR {Rattus norvegicus} PDB: 2ktr_B
Probab=95.51 E-value=0.024 Score=43.09 Aligned_cols=61 Identities=20% Similarity=0.257 Sum_probs=45.5
Q ss_pred cceeEEEEcCc----ccceeecCCC-----------cCCHHHHHHHHHHhhcccccccccchhhhhcccCCCceeeEEec
Q 044582 92 CKFVKVAVEGA----PYLRKVDLEI-----------YHSYQELLSALEDMFSFLTIRNHVNERKIIDNVNGVEYVPTYED 156 (202)
Q Consensus 92 ~~~VKV~mdG~----pigRkVDL~~-----------~~sY~eL~~~L~~MF~~~~i~~~~~e~~l~d~~~~~~~~ltYeD 156 (202)
..-||++..|. .--|++-|.. ..+|++|...+.++|... .+..|.+.|.|
T Consensus 5 ~~~vKayl~~~~~~~~EiRRF~l~~~~~p~~~~~~~~~s~~~L~~~V~~lFp~l---------------~~~~f~l~Y~D 69 (102)
T 2kkc_A 5 SLTVKAYLLGKEEAAREIRRFSFCFSPEPEAEAAAGPGPCERLLSRVAVLFPAL---------------RPGGFQAHYRA 69 (102)
T ss_dssp EEEEEEEEECSSSCEEEEEEEEEESSSCSCSSSCCSCCHHHHHHHHHHHHCTTS---------------CSSCEEEEEEC
T ss_pred eEEEEEEEccCCCCCCceEEEEeccCCCcccccccccccHHHHHHHHHHHcccc---------------CCCcEEEEEEC
Confidence 46789998762 2446555532 248999999999999831 24569999999
Q ss_pred CCCCeEEccCc
Q 044582 157 KDGDWMLVGDV 167 (202)
Q Consensus 157 ~dGDwmLVGDv 167 (202)
.|||+.-+-+.
T Consensus 70 edGDlItiSsD 80 (102)
T 2kkc_A 70 ERGDLVAFSSD 80 (102)
T ss_dssp TTCCEEEECSH
T ss_pred CCCCEEEecCH
Confidence 99999888764
No 4
>2ktr_A Sequestosome-1; autophagy, NF-KB signaling, HOMO-oligomer, PB1 dimer, signaling protein, transport protein; NMR {Rattus norvegicus}
Probab=95.46 E-value=0.03 Score=43.65 Aligned_cols=70 Identities=19% Similarity=0.229 Sum_probs=45.9
Q ss_pred hhhhhhcCCcceeEEEEcCc----ccceeecCC-----------CcCCHHHHHHHHHHhhcccccccccchhhhhcccCC
Q 044582 83 YRKSAMKGSCKFVKVAVEGA----PYLRKVDLE-----------IYHSYQELLSALEDMFSFLTIRNHVNERKIIDNVNG 147 (202)
Q Consensus 83 ~Rkn~~~~~~~~VKV~mdG~----pigRkVDL~-----------~~~sY~eL~~~L~~MF~~~~i~~~~~e~~l~d~~~~ 147 (202)
|--|.++.+..-||++..|. .==|++-|. .-.+|++|...+.++|... .+
T Consensus 11 ~~~~~~~~~~l~vKayl~~~~~~~~EIRRF~l~~~~~p~~~~~~~~~s~~~L~~kV~~lFp~L---------------~~ 75 (117)
T 2ktr_A 11 YEGDELHMGSLTVKAYLLGKEEAAREIRRFSFCFSPEPEAEAAAGPGPSERLLSRVAVLFPAL---------------RP 75 (117)
T ss_dssp ---------CEEEEEEEECSSSCEEEEEEEEECSSSCSCSSSCCSCCHHHHHHHHHHHHCTTS---------------CS
T ss_pred eeccccccccEEEEEEEecCCCCCCcEEEEEeccCCCccccccccCCCHHHHHHHHHHHcccc---------------CC
Confidence 44455555678999999752 224555553 1359999999999999821 24
Q ss_pred CceeeEEecCCCCeEEccCc
Q 044582 148 VEYVPTYEDKDGDWMLVGDV 167 (202)
Q Consensus 148 ~~~~ltYeD~dGDwmLVGDv 167 (202)
..|.+.|.|.|||+.-+-..
T Consensus 76 ~~f~l~YkDEdGDlItISsD 95 (117)
T 2ktr_A 76 GGFQAHYRAERGDLVAFSSD 95 (117)
T ss_dssp SCEEEEEECTTCCEEEECSH
T ss_pred CcEEEEEECCCCCEEEecCH
Confidence 56999999999999877664
No 5
>1q1o_A Cell division control protein 24; PB1 domain, PCCR, PC motif, OPCA motif, yeast, cell polarity, protein-protein interaction; NMR {Saccharomyces cerevisiae} SCOP: d.15.2.2 PDB: 2kfj_A 2kfk_B
Probab=89.91 E-value=0.91 Score=34.26 Aligned_cols=75 Identities=16% Similarity=0.314 Sum_probs=53.6
Q ss_pred cceeEEEEcCc------ccceeecCCCcCCHHHHHHHHHHhhcccccccccchhhhhcccCCCceeeEEecCCCCeEEcc
Q 044582 92 CKFVKVAVEGA------PYLRKVDLEIYHSYQELLSALEDMFSFLTIRNHVNERKIIDNVNGVEYVPTYEDKDGDWMLVG 165 (202)
Q Consensus 92 ~~~VKV~mdG~------pigRkVDL~~~~sY~eL~~~L~~MF~~~~i~~~~~e~~l~d~~~~~~~~ltYeD~dGDwmLVG 165 (202)
+.-|||+-+.. .=.+.|=+..--+|++|...+.+-|..++ . + +. .....+-|+|.|||+...+
T Consensus 5 sikVKv~y~~~~~~~~~~d~~~i~V~~~i~f~~L~~kI~~Kl~~~~-~----~----~i--~~~~klkYkDEdGD~Vtl~ 73 (98)
T 1q1o_A 5 SILFRISYNNNSNNTSSSEIFTLLVEKVWNFDDLIMAINSKISNTH-N----N----NI--SPITKIKYQDEDGDFVVLG 73 (98)
T ss_dssp CEEEEEEECSSCSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHC-S----S----CC--CCCCCEEEECSSSCEEEEC
T ss_pred cEEEEEEecCcccccccCcEEEEEecCCCCHHHHHHHHHHHHcCCc-c----c----cc--cceeEEEEEcCCCCEEEEc
Confidence 35678887732 11366667778899999999999998421 1 1 10 1346799999999998887
Q ss_pred C-cChhHHHhcce
Q 044582 166 D-VPWKMFVESCK 177 (202)
Q Consensus 166 D-vPW~~Fv~svk 177 (202)
+ .=|+|-+++++
T Consensus 74 sddDl~~A~e~~~ 86 (98)
T 1q1o_A 74 SDEDWNVAKEMLA 86 (98)
T ss_dssp SHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 6 58999888763
No 6
>1oey_J P40-PHOX, neutrophil cytosol factor 4; immune system, PB1 heterodimer/complex, NADPH oxidase, PB1 D heterodimerization; 2.0A {Homo sapiens} SCOP: d.15.2.2
Probab=84.53 E-value=1.4 Score=33.79 Aligned_cols=41 Identities=22% Similarity=0.267 Sum_probs=33.1
Q ss_pred cCCCcCCHHHHHHHHHHhhcccccccccchhhhhcccCCCceeeEEecCCCCeEEccCc
Q 044582 109 DLEIYHSYQELLSALEDMFSFLTIRNHVNERKIIDNVNGVEYVPTYEDKDGDWMLVGDV 167 (202)
Q Consensus 109 DL~~~~sY~eL~~~L~~MF~~~~i~~~~~e~~l~d~~~~~~~~ltYeD~dGDwmLVGDv 167 (202)
||+..-.|.+|+.-..+-|.. .+-+|-|.|.|||+.-+=|.
T Consensus 28 dl~~~P~ykdLl~lmr~~F~~------------------~DIaLNYrD~eGDLIrildd 68 (107)
T 1oey_J 28 DLSSTPLLKDLLELTRREFQR------------------EDIALNYRDAEGDLVRLLSD 68 (107)
T ss_dssp CTTCCCCHHHHHHHHHHHHCC------------------SSEEEEEECTTSCEEECCSH
T ss_pred ccccCCCHHHHHHHHHHHhcc------------------cceeeeeecCCCCEEEEcch
Confidence 677888999999999999983 13468999999999766554
No 7
>1oey_A P67-PHOX, neutrophil cytosol factor 2; immune system, PB1 heterodimer/complex, NADPH oxidase, PB1 D heterodimerization; 2.0A {Homo sapiens} SCOP: d.15.2.2
Probab=83.69 E-value=4.6 Score=29.39 Aligned_cols=69 Identities=13% Similarity=0.120 Sum_probs=53.0
Q ss_pred eeEEEEcCcccceeecCCCcCCHHHHHHHHHHhhcccccccccchhhhhcccCCCceeeEEec-CCCCeEEccCcChhHH
Q 044582 94 FVKVAVEGAPYLRKVDLEIYHSYQELLSALEDMFSFLTIRNHVNERKIIDNVNGVEYVPTYED-KDGDWMLVGDVPWKMF 172 (202)
Q Consensus 94 ~VKV~mdG~pigRkVDL~~~~sY~eL~~~L~~MF~~~~i~~~~~e~~l~d~~~~~~~~ltYeD-~dGDwmLVGDvPW~~F 172 (202)
=|||+-. +.-.|....=-+|.+|...|.+=+.. . +.+-+|-|.| .+|.|++.+|.=|+.-
T Consensus 7 ~VKV~~~---~tvairvp~~~~y~~L~~~l~~kL~l---~-------------~~~~~LsYk~~~s~~~vi~~d~dl~~a 67 (83)
T 1oey_A 7 TLKVHYK---YTVVMKTQPGLPYSQVRDMVSKKLEL---R-------------LEHTKLSYRPRDSNELVPLSEDSMKDA 67 (83)
T ss_dssp EEEEESS---SEEEEEECTTCCHHHHHHHHHHHTTC---C-------------GGGCCEEECCTTCSSCEECCTTTHHHH
T ss_pred EEEEEEE---EEEEEECCCCCCHHHHHHHHHHHhCC---C-------------cceeEEEeeCCCCCCeeccChHHHHHH
Confidence 4566665 67788888888999999999998882 1 1123689999 6889999999999988
Q ss_pred Hhcce--eeEE
Q 044582 173 VESCK--RVRL 181 (202)
Q Consensus 173 v~svk--RLrI 181 (202)
...++ ||.+
T Consensus 68 w~~~~n~~LtL 78 (83)
T 1oey_A 68 WGQVKNYCLTL 78 (83)
T ss_dssp HTTCBTTEEEE
T ss_pred HHhccCCcEEE
Confidence 88755 5554
No 8
>1pqs_A Cell division control protein 24; alpha and beta protein, cell cycle; NMR {Saccharomyces cerevisiae} SCOP: d.15.2.2 PDB: 1tz1_A
Probab=83.43 E-value=1 Score=32.33 Aligned_cols=57 Identities=23% Similarity=0.420 Sum_probs=41.5
Q ss_pred CCCcCCHHHHHHHHHHhhcccccccccchhhhhcccCCCceeeEEecCCCCeEEccC-cChhHHHhcce
Q 044582 110 LEIYHSYQELLSALEDMFSFLTIRNHVNERKIIDNVNGVEYVPTYEDKDGDWMLVGD-VPWKMFVESCK 177 (202)
Q Consensus 110 L~~~~sY~eL~~~L~~MF~~~~i~~~~~e~~l~d~~~~~~~~ltYeD~dGDwmLVGD-vPW~~Fv~svk 177 (202)
...--+|++|...+.+-|..+. ++ + ......+-|+|.|||+...++ .=|+|-+.++|
T Consensus 8 V~~~i~f~~L~~kI~~kl~~~~-----~~----~--~~~~~~lkYkDEdGD~Vti~sddDl~~A~~~~~ 65 (77)
T 1pqs_A 8 VEKVWNFDDLIMAINSKISNTH-----NN----N--ISPITKIKYQDEDGDFVVLGSDEDWNVAKEMLA 65 (77)
T ss_dssp CTTCCCSHHHHHHHHHHTTTTT-----SS----C--SCSTTCCEEEETTTEEEECCSTTHHHHHHHHHH
T ss_pred eCCCCCHHHHHHHHHHHHcccc-----cc----c--ccceeEEEEEcCCCCEEEEcCHHHHHHHHHHHH
Confidence 4455689999999999998421 00 0 023568999999999987766 68999888763
No 9
>2bkf_A Zinc-finger protein NBR1 (NEXT to breast cancer 1; PB1 domain, interaction domain, Z finger; 1.56A {Homo sapiens} SCOP: d.15.2.2 PDB: 2g4s_A
Probab=80.93 E-value=5.3 Score=29.55 Aligned_cols=55 Identities=9% Similarity=0.093 Sum_probs=41.3
Q ss_pred eeEEEEcCcccceeecCCCcCCHHHHHHHHHHhhcccccccccchhhhhcccCCCceeeEEecCCCCeEEccC
Q 044582 94 FVKVAVEGAPYLRKVDLEIYHSYQELLSALEDMFSFLTIRNHVNERKIIDNVNGVEYVPTYEDKDGDWMLVGD 166 (202)
Q Consensus 94 ~VKV~mdG~pigRkVDL~~~~sY~eL~~~L~~MF~~~~i~~~~~e~~l~d~~~~~~~~ltYeD~dGDwmLVGD 166 (202)
-+||.--|...=--|.-..--++++|...+..+|+. +.++|.|.|.|||-.-|=-
T Consensus 8 ~lkV~f~ge~~rf~vs~~~~~tweel~~mvk~~f~L------------------~~~~ikY~DEenD~v~i~S 62 (87)
T 2bkf_A 8 TLNVTFKNEIQSFLVSDPENTTWADIEAMVKVSFDL------------------NTIQIKYLDEENEEVSINS 62 (87)
T ss_dssp EEEEEETTEEEEEEESCGGGCCHHHHHHHHHHHHTC------------------SSEEEEEECTTSCEEEECS
T ss_pred EEEEEEcCCeeEEEeccCCCCCHHHHHHHHHHHcCC------------------CceEEEEEcCCCCEEEEec
Confidence 468888888543346444477899999999999982 1468999999999876643
No 10
>1wj6_A KIAA0049 protein, RSGI RUH-024; PB1 domain, protein binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: d.15.2.2
Probab=78.05 E-value=5.6 Score=30.19 Aligned_cols=64 Identities=9% Similarity=0.075 Sum_probs=46.4
Q ss_pred ceeEEEEcCcccceeecCCCcCCHHHHHHHHHHhhcccccccccchhhhhcccCCCceeeEEecCCCCeEEccCcChhHH
Q 044582 93 KFVKVAVEGAPYLRKVDLEIYHSYQELLSALEDMFSFLTIRNHVNERKIIDNVNGVEYVPTYEDKDGDWMLVGDVPWKMF 172 (202)
Q Consensus 93 ~~VKV~mdG~pigRkVDL~~~~sY~eL~~~L~~MF~~~~i~~~~~e~~l~d~~~~~~~~ltYeD~dGDwmLVGDvPW~~F 172 (202)
.-+||.--|...=--|.-..--++++|...+..+|+. +.++|.|.|.|||-.-|=- +.+|
T Consensus 15 v~lkV~f~ge~~rF~Vs~~~~~tweel~~mvk~~f~L------------------~~~~IkY~DEenD~V~i~S--q~E~ 74 (101)
T 1wj6_A 15 VTLNVTFKNEIQSFLVSDPENTTWADIEAMVKVSFDL------------------NTIQIKYLDEENEEVSINS--QGEY 74 (101)
T ss_dssp EEEEEEETTEEEEEEESCTTTSCHHHHHHHHHHHHCC------------------SSBCCEEECTTSCEECCCS--HHHH
T ss_pred EEEEEEEcCCeeEEEecCCCCCCHHHHHHHHHHHcCC------------------CceEEEEecCCCCEEEEec--HHHH
Confidence 3578899998544446444567899999999999982 1358999999999887743 5555
Q ss_pred Hhcc
Q 044582 173 VESC 176 (202)
Q Consensus 173 v~sv 176 (202)
-+.+
T Consensus 75 eEAl 78 (101)
T 1wj6_A 75 EEAL 78 (101)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
No 11
>3o27_A Putative uncharacterized protein; swapped-hairpin fold, transcription factor, DNA binding PROT; 2.80A {Sulfolobus islandicus}
Probab=68.68 E-value=1.6 Score=31.10 Aligned_cols=22 Identities=32% Similarity=0.442 Sum_probs=18.8
Q ss_pred cccCCCceeeEEecCCCCeEEc
Q 044582 143 DNVNGVEYVPTYEDKDGDWMLV 164 (202)
Q Consensus 143 d~~~~~~~~ltYeD~dGDwmLV 164 (202)
++..+.++.++++|++|+.+|+
T Consensus 38 gIk~gD~fel~ve~kdgeIvLc 59 (68)
T 3o27_A 38 DIKPDDTFILNMEQKDGDIVLS 59 (68)
T ss_dssp TCCTTCCEEEEEEEETTEEEEE
T ss_pred CCCCCCEEEEEEecCCCeEEEE
Confidence 4556788999999999999887
No 12
>1e8p_A Endoglucanase, dockerin; cellulose docking domain, cellulase; NMR {Piromyces equi} SCOP: g.55.1.1 PDB: 1e8q_A
Probab=65.28 E-value=1.8 Score=28.67 Aligned_cols=13 Identities=31% Similarity=0.741 Sum_probs=11.2
Q ss_pred eeEEecCCCCeEE
Q 044582 151 VPTYEDKDGDWML 163 (202)
Q Consensus 151 ~ltYeD~dGDwmL 163 (202)
.|+|+|.||||=.
T Consensus 20 ~V~YtD~dG~WGV 32 (46)
T 1e8p_A 20 KVEYTDASGQWGV 32 (46)
T ss_dssp CEEEEETTEEEEE
T ss_pred eEEEEcCCCcccc
Confidence 4889999999954
No 13
>2npt_A Dual specificity mitogen-activated protein kinase; MAP2K5, MEK5, MKK PRKMK5, MAP kinase kinase 5, PHOX, PHOX-domain; 1.75A {Homo sapiens} SCOP: d.15.2.2 PDB: 2o2v_A 1wi0_A
Probab=46.45 E-value=38 Score=25.62 Aligned_cols=57 Identities=18% Similarity=0.270 Sum_probs=39.5
Q ss_pred ceeEEEEc-CcccceeecCCCcCCHHHHHHHHHHhhcccccccccchhhhhcccCCCceeeEEecCCCCeEEccC
Q 044582 93 KFVKVAVE-GAPYLRKVDLEIYHSYQELLSALEDMFSFLTIRNHVNERKIIDNVNGVEYVPTYEDKDGDWMLVGD 166 (202)
Q Consensus 93 ~~VKV~md-G~pigRkVDL~~~~sY~eL~~~L~~MF~~~~i~~~~~e~~l~d~~~~~~~~ltYeD~dGDwmLVGD 166 (202)
.-+.+... |..+--.||-..+=++.+|+.++.+....-|. -..-|||.+||.+-|--
T Consensus 15 lVIRIk~p~~g~vDwaV~~~~~L~FrDvL~~I~~vmP~aT~-----------------TAFeYEDE~gDRITVRS 72 (106)
T 2npt_A 15 LVIRIKIPNSGAVDWTVHSGPQLLFRDVLDVIGQVLPEATT-----------------TAFEYEDEDGDRITVRS 72 (106)
T ss_dssp EEEEEEETTTEEEEEEECC--CCCHHHHHHHHHHHSTTSCC-----------------SEEEEECTTSCEEEECS
T ss_pred eEEEEECCCCCccccccCCcccccHHHHHHHHHHhCcccee-----------------eeeeeccccCCeeEEcc
Confidence 34455554 55677778877777899999998887763221 14679999999988854
No 14
>2j4m_A Endoglucanase 45A; dockerin, cellulosome, protein binding, small cysteine-rich; NMR {Piromyces equi} PDB: 2j4n_A
Probab=41.66 E-value=7.1 Score=29.59 Aligned_cols=13 Identities=31% Similarity=0.741 Sum_probs=11.2
Q ss_pred eeEEecCCCCeEE
Q 044582 151 VPTYEDKDGDWML 163 (202)
Q Consensus 151 ~ltYeD~dGDwmL 163 (202)
.|+|.|.||||=.
T Consensus 21 ~V~YtD~dG~WGV 33 (100)
T 2j4m_A 21 KVEYTDASGQWGV 33 (100)
T ss_dssp CCCEESSSCEEEE
T ss_pred eEEEEcCCCccce
Confidence 5889999999954
No 15
>2kvv_A Putative excisionase; DNA binding, WHTH motif, structural genomics, N structural genomics consortium (NESG), PSI-2; NMR {Klebsiella pneumoniae}
Probab=21.83 E-value=44 Score=24.09 Aligned_cols=46 Identities=26% Similarity=0.476 Sum_probs=33.5
Q ss_pred CchhhhhhhcCCcceeEEEEcCcccceeecCCCcCCHHHHHHHHHHhhc
Q 044582 80 VRAYRKSAMKGSCKFVKVAVEGAPYLRKVDLEIYHSYQELLSALEDMFS 128 (202)
Q Consensus 80 Vrs~Rkn~~~~~~~~VKV~mdG~pigRkVDL~~~~sY~eL~~~L~~MF~ 128 (202)
|+.||+++.-.+.-|++|+-||.|-.+.-. .| +|+++-+=.+.|..
T Consensus 27 IkryR~~~WlEGrhyrrvspdG~p~~~S~~--~Y-N~~~I~~Wie~~~~ 72 (78)
T 2kvv_A 27 IESYRQGAWIEGVHFKRVSPSGEKTLRGTT--WY-NYPEINKFIRDSLE 72 (78)
T ss_dssp HHHHHTTTCCBTTTEEEECSSSSCCTTCEE--EE-EHHHHHHHHHHHHS
T ss_pred HHHHHhchhhheeeeEeeCCCCCCCcCceE--EE-cHHHHHHHHHHHHh
Confidence 578998777778899999999999777766 23 45555555555554
No 16
>2i1s_A Hypothetical protein; methanosarcina mazei,MAD, PSI-2,MCSG, structural genomics, protein structure initiative; 2.30A {Methanosarcina mazei} SCOP: d.343.1.1
Probab=21.34 E-value=78 Score=25.18 Aligned_cols=37 Identities=14% Similarity=0.369 Sum_probs=34.0
Q ss_pred cceeEEEEcCc--ccceeecCCCcCCHHHHHHHHHHhhc
Q 044582 92 CKFVKVAVEGA--PYLRKVDLEIYHSYQELLSALEDMFS 128 (202)
Q Consensus 92 ~~~VKV~mdG~--pigRkVDL~~~~sY~eL~~~L~~MF~ 128 (202)
...+||..+|. +|=|.|.+..--+..+|..+|...|+
T Consensus 8 iy~lrV~L~~~~p~iWRri~Vp~~~TL~~LH~vIq~afg 46 (188)
T 2i1s_A 8 VYHLKLSIKGITPQIWRRIQVPENYTFLDLHKAIQAVMD 46 (188)
T ss_dssp EEEEEEEETTCSSCEEEEEEEETTCBHHHHHHHHHHHTT
T ss_pred EEEEEEEECCCCCCeEEEEEECCCCCHHHHHHHHHHHhC
Confidence 35689999986 79999999999999999999999998
Done!