Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>044588
MAAPATLANFMGMKPQLLVEESKATNVVQFYKTTSGAQLEIAGSTFLVSNFSNDSAAAKN
MGIGCVLCLEIDDVEAALAKAMSGGVWATGRVGKVKDPCGFTWLIYSPVKKCADVEA

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  044588
        (117 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2165996 - symbol:AT5G48480 "AT5G48480" species...   105  1.0e-10   2


>TAIR|locus:2165996 [details] [associations]
            symbol:AT5G48480 "AT5G48480" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0005829 "cytosol" evidence=IDA] GO:GO:0005829
            EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB020745 EMBL:AY074359
            EMBL:AY133780 EMBL:AY087100 IPI:IPI00545405 RefSeq:NP_568698.1
            UniGene:At.20821 UniGene:At.68124 PDB:1XY7 PDB:2Q48 PDBsum:1XY7
            PDBsum:2Q48 ProteinModelPortal:Q9LV66 SMR:Q9LV66 STRING:Q9LV66
            PaxDb:Q9LV66 PRIDE:Q9LV66 DNASU:834903 EnsemblPlants:AT5G48480.1
            GeneID:834903 KEGG:ath:AT5G48480 TAIR:At5g48480 eggNOG:NOG319495
            HOGENOM:HOG000155384 InParanoid:Q9LV66 OMA:ANDAVQF PhylomeDB:Q9LV66
            ProtClustDB:CLSN2689955 EvolutionaryTrace:Q9LV66
            Genevestigator:Q9LV66 GermOnline:AT5G48480 Uniprot:Q9LV66
        Length = 166

 Score = 105 (42.0 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
 Identities = 31/79 (39%), Positives = 43/79 (54%)

Query:    37 AQLEIAGSTFLVSNFSN--DSAAAKNMGIGCVLCLEIDDVEAALAKAMSGG---VWAT-- 89
             ++L +AGS+F+V + S+    + AK+ G G    L   D EAA+AKA+  G   V  T  
Sbjct:    73 SELNLAGSSFVVCDVSSLPGFSTAKSEGSGVTFLLGTKDAEAAVAKAVDAGAVKVEVTEA 132

Query:    90 ----GRVGKVKDPCGFTWL 104
                 G  GKV DP G TW+
Sbjct:   133 EVELGFKGKVTDPFGVTWI 151

 Score = 57 (25.1 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
 Identities = 13/28 (46%), Positives = 15/28 (53%)

Query:    10 FMGMKPQLLVEESKATNVVQFYKTTSGA 37
             F   K  LLVE  K  + V FYK+  GA
Sbjct:    23 FTEFKQMLLVEAQKVGDAVTFYKSAFGA 50


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.130   0.386    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      117       117   0.00091  102 3  11 22  0.48    30
                                                     29  0.46    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  565 (60 KB)
  Total size of DFA:  121 KB (2078 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.54u 0.14s 11.68t   Elapsed:  00:00:00
  Total cpu time:  11.54u 0.14s 11.68t   Elapsed:  00:00:00
  Start:  Fri May 10 01:10:34 2013   End:  Fri May 10 01:10:34 2013

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