Query 044590
Match_columns 347
No_of_seqs 174 out of 1367
Neff 7.6
Searched_HMMs 46136
Date Fri Mar 29 04:50:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044590.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/044590hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1558 Fe2+/Zn2+ regulated tr 100.0 2.3E-53 4.9E-58 402.4 30.3 301 40-346 9-327 (327)
2 TIGR00820 zip ZIP zinc/iron tr 100.0 4.1E-50 9E-55 384.0 26.9 293 46-346 15-324 (324)
3 PLN02159 Fe(2+) transport prot 100.0 1.6E-48 3.5E-53 372.6 31.0 282 42-346 42-337 (337)
4 PF02535 Zip: ZIP Zinc transpo 100.0 1.2E-45 2.7E-50 352.4 25.4 291 49-343 3-317 (317)
5 PRK04201 zinc transporter ZupT 100.0 3.5E-34 7.7E-39 267.5 24.5 251 51-345 8-263 (265)
6 COG0428 Predicted divalent hea 100.0 7.1E-27 1.5E-31 217.7 23.4 248 47-343 7-261 (266)
7 KOG2693 Putative zinc transpor 99.9 2E-22 4.2E-27 198.4 10.6 295 44-346 130-453 (453)
8 KOG2694 Putative zinc transpor 99.8 1.5E-19 3.2E-24 162.1 19.1 260 63-344 80-358 (361)
9 KOG3907 ZIP-like zinc transpor 99.7 5E-20 1.1E-24 163.6 -9.3 247 52-343 8-298 (303)
10 KOG2474 Zinc transporter and r 99.0 2.9E-10 6.4E-15 108.3 4.1 122 190-317 241-378 (406)
11 PRK04201 zinc transporter ZupT 98.2 6E-06 1.3E-10 77.4 9.5 88 253-345 4-93 (265)
12 PF02535 Zip: ZIP Zinc transpo 96.3 0.027 5.8E-07 53.5 9.6 80 265-344 13-97 (317)
13 COG0428 Predicted divalent hea 93.5 0.3 6.4E-06 45.9 7.7 56 75-134 209-264 (266)
14 PRK11469 hypothetical protein; 90.0 3.9 8.4E-05 36.3 10.4 21 195-215 6-26 (188)
15 TIGR00820 zip ZIP zinc/iron tr 87.6 1.6 3.4E-05 42.2 6.7 54 77-131 266-321 (324)
16 KOG1558 Fe2+/Zn2+ regulated tr 85.7 6.7 0.00014 37.9 9.8 83 192-277 201-287 (327)
17 COG5336 Uncharacterized protei 81.9 6.2 0.00013 31.7 6.4 53 258-310 47-99 (116)
18 PLN02159 Fe(2+) transport prot 79.6 11 0.00023 36.7 8.7 56 287-343 78-139 (337)
19 KOG2693 Putative zinc transpor 74.8 0.97 2.1E-05 45.5 0.0 74 58-131 373-450 (453)
20 COG1971 Predicted membrane pro 74.7 51 0.0011 29.3 10.8 53 254-306 34-89 (190)
21 KOG2694 Putative zinc transpor 70.0 16 0.00034 34.1 6.6 64 282-345 98-163 (361)
22 TIGR02230 ATPase_gene1 F0F1-AT 68.8 17 0.00037 28.9 5.8 40 263-302 52-91 (100)
23 TIGR02840 spore_YtaF putative 66.8 65 0.0014 28.9 10.0 52 252-303 29-80 (206)
24 PF11151 DUF2929: Protein of u 59.2 31 0.00067 24.4 5.1 52 254-313 4-55 (57)
25 PRK13755 putative mercury tran 55.9 1E+02 0.0022 25.5 8.2 17 330-346 103-119 (139)
26 PF09527 ATPase_gene1: Putativ 52.6 49 0.0011 22.8 5.3 39 263-301 10-48 (55)
27 TIGR02896 spore_III_AF stage I 44.2 86 0.0019 25.1 6.1 38 295-343 9-46 (106)
28 PF14143 YrhC: YrhC-like prote 37.5 68 0.0015 23.9 4.2 17 295-313 17-33 (72)
29 TIGR00145 FTR1 family protein. 36.2 3.8E+02 0.0082 25.4 10.4 81 226-307 7-93 (283)
30 PRK14740 kdbF potassium-transp 34.9 74 0.0016 19.2 3.2 20 288-307 3-22 (29)
31 PF06570 DUF1129: Protein of u 33.9 3.4E+02 0.0073 24.1 9.7 30 304-341 164-193 (206)
32 PF03823 Neurokinin_B: Neuroki 33.1 85 0.0018 22.1 3.8 22 1-23 1-22 (59)
33 PF04647 AgrB: Accessory gene 32.2 3.3E+02 0.0071 23.4 8.8 20 221-240 38-57 (185)
34 TIGR02840 spore_YtaF putative 29.3 4.2E+02 0.009 23.7 10.4 47 256-306 29-76 (206)
35 PF02659 DUF204: Domain of unk 28.4 2.2E+02 0.0047 20.2 7.8 21 258-278 28-48 (67)
36 PF04210 MtrG: Tetrahydrometha 26.5 88 0.0019 23.1 3.1 21 290-310 47-67 (70)
37 COG3965 Predicted Co/Zn/Cd cat 24.8 6E+02 0.013 24.0 10.0 50 255-304 162-211 (314)
38 PF13829 DUF4191: Domain of un 24.6 5.5E+02 0.012 23.5 8.8 43 256-306 28-70 (224)
39 PRK01026 tetrahydromethanopter 23.6 1E+02 0.0022 23.2 3.1 22 290-311 50-71 (77)
40 TIGR01149 mtrG N5-methyltetrah 23.5 1.1E+02 0.0023 22.6 3.1 22 290-311 47-68 (70)
41 PF13124 DUF3963: Protein of u 23.3 1.6E+02 0.0036 18.8 3.5 22 324-345 17-38 (40)
42 PRK03557 zinc transporter ZitB 22.2 6.8E+02 0.015 23.7 10.7 31 78-108 86-116 (312)
43 KOG4812 Golgi-associated prote 21.3 2E+02 0.0044 26.6 5.1 77 49-128 162-238 (262)
44 KOG2474 Zinc transporter and r 20.9 85 0.0018 31.0 2.8 56 253-313 45-100 (406)
45 KOG3850 Predicted membrane pro 20.0 2E+02 0.0042 28.5 5.0 46 47-97 395-440 (455)
No 1
>KOG1558 consensus Fe2+/Zn2+ regulated transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-53 Score=402.42 Aligned_cols=301 Identities=29% Similarity=0.515 Sum_probs=237.4
Q ss_pred CcCCcchHHHHHHHHHHHHHHHHhhhhccccccc------chhHHHHHhhhhhhHHHHHHHHHhcHhHHHHhccC-----
Q 044590 40 NLRSKPLILVKIWCLMIIFVGTFVGGVSPYFLKW------NEGFLVLGTQFAGGVFLGTALMHFLSDANETFGDL----- 108 (347)
Q Consensus 40 ~~~~~~l~~~ki~~l~~i~~~t~~G~~iP~~~~~------~~~~l~~~~~faaGvlLg~a~~hLLPea~e~~~~~----- 108 (347)
+.+.++...+|+++++++|++|++|+++|++.|+ +++.+.+.+||++||+|+|+|+|+|||++|.+++.
T Consensus 9 ~~~~~~~~~lKi~ai~vil~~s~i~~~~Pl~~~~~~~~~~~~~~~~~~kcFa~GViLaT~FlH~Lpd~~E~l~~~~~~~~ 88 (327)
T KOG1558|consen 9 CADKMGALLLKIVAIFVILLLSLIGGLLPLFVRRTSALQPESRFLSLVKCFAGGVILATGFLHLLPDAFEALESLCLADN 88 (327)
T ss_pred ccchhhhhhHHHHHHHHHHHHHHHHhcchHhhccccccCCccchHHHHHHHhccHHHHHHHHHhChhHHHHhhcccccCC
Confidence 3456667788999999999999999999998864 56799999999999999999999999999998875
Q ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhccCCC-CCCc-ccccCCCCCCCCCCCCCCCccccCCCCCCCCCCccc--
Q 044590 109 TSKEYPFAFMLACAGYLFTMLADCAISFVLDKKRDA-SNAD-LERQGGLEGGKSSHHSATSQSVSQGQNGTDGHSSKF-- 184 (347)
Q Consensus 109 ~~~~~p~~~~~~~~Gf~l~~lle~i~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~-- 184 (347)
++.+||++.+++++||++++++|.+...+.++++.+ .+.+ ...+++++....+... ++. .++++++.|....
T Consensus 89 ~~~~fp~~~~i~~~gf~l~l~id~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~ 164 (327)
T KOG1558|consen 89 PWGKFPFAEFIAMLGFFLTLLIDEITTSYVGHGHSHKKRNEVAVSEEGEDLRAVGNGE--HGA--IHVGHSHGHSEPSTP 164 (327)
T ss_pred CCcCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCcCcCcccccccccC--Ccc--ccCCCCCCCCCCCCc
Confidence 457899999999999999999999999887554332 1100 0011111000000000 000 0001111111000
Q ss_pred cc--ccccchhhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCchHHHHHHHHH
Q 044590 185 SL--TAASSLGDSILLIVALCFHSVFEGIAIGVAETQADAWKALWTICLHKIFAAIAMGIALLRMIPDRPFLSCVAYAFA 262 (347)
Q Consensus 185 ~~--~~~~~~~~~~ll~~al~~Hs~~EGlalGv~~~~~~~~~l~~aI~lHki~eg~alg~~L~~~~~~~~~~~~~~~~~~ 262 (347)
.. ..+.+..+++.+++|+++||++||+++|++.+++..|.++.|+.+||.+||+++|.++.++ ++++++.+.++++
T Consensus 165 ~~~~~~~~~~~~~~iL~lgi~~HSvfeGlalGv~~~~~ti~~L~~al~fHk~fegf~lG~~l~~a--~~~~~~~~~~~~~ 242 (327)
T KOG1558|consen 165 GVVDDGQASRLRSLILELGLSFHSVFEGLALGVQDSVSTIWTLFLALSFHKLFEGFGLGGCLLQA--GFTFKSAVLMALF 242 (327)
T ss_pred cccchhhhhhHHHHHHHHHHHHHHHHHhhhccccCCHHHHHHHHHHHHHHHHHHHhcccHHHhhc--ccchHHHHHHHHH
Confidence 00 0111345688999999999999999999999999999999999999999999999999998 3556789999999
Q ss_pred HHhhhHHHHHHHHHhhhc-CCCCchhHHHHHHHHhhhHHHHHHHHHHhhhcccCCCCCCCCcchHHHHHHHHHHHHHHHH
Q 044590 263 FAISSPVGVAIGIIIDAT-TQGPVADWIFAISMGLACGVFIYVSINHLLSKGYTPQKTVSVDTPNYKFLAVVLGVGVIAV 341 (347)
Q Consensus 263 fsl~tPiG~~iG~~i~~~-~~~~~~~~~~~il~alAaG~flYVa~~eLlp~~~~~~~~~~~~~~~~~~~~~~lG~~~ma~ 341 (347)
||++||+|+++|+.+.+. .++..++++.++++|+|+|+|+||+++|++|+++.+++.++.+.++.+++++++|+++|++
T Consensus 243 fslttPiGi~iG~~i~~~~~~s~~~~i~~gvL~alAaGtliY~~lvElla~ef~~~~~~~~~~~i~~~i~~~~G~alms~ 322 (327)
T KOG1558|consen 243 FSLTTPIGIALGIGISSSYENSPGALITSGVLEALAAGTLIYVALVELLAAEFANPKMQSLKLQILKLIALLLGFALMSL 322 (327)
T ss_pred HHHHhHHHHHHHHHhcccccCCchhHHHHHHHHHHhhhHhHHHHHHHHhHHHhcCchhhhHHHHHHHHHHHHHhHHHHHH
Confidence 999999999999999887 4567889999999999999999999999999999877644578899999999999999999
Q ss_pred HHhhc
Q 044590 342 VMIWD 346 (347)
Q Consensus 342 l~~w~ 346 (347)
+++|+
T Consensus 323 l~~wa 327 (327)
T KOG1558|consen 323 LAIWA 327 (327)
T ss_pred HHHhC
Confidence 99996
No 2
>TIGR00820 zip ZIP zinc/iron transport family. transport has not been characterized, but these systems probably function as secondary carriers.
Probab=100.00 E-value=4.1e-50 Score=384.01 Aligned_cols=293 Identities=21% Similarity=0.378 Sum_probs=221.2
Q ss_pred hHHHHHHHHHHHHHHHHhhhhccccccc------chhHHHHHhhhhhhHHHHHHHHHhcHhHHHHhccC-----CCCCCc
Q 044590 46 LILVKIWCLMIIFVGTFVGGVSPYFLKW------NEGFLVLGTQFAGGVFLGTALMHFLSDANETFGDL-----TSKEYP 114 (347)
Q Consensus 46 l~~~ki~~l~~i~~~t~~G~~iP~~~~~------~~~~l~~~~~faaGvlLg~a~~hLLPea~e~~~~~-----~~~~~p 114 (347)
.+.+|+++++++++.|++|+++|++.|+ +++.+.+++|||+||+|+|+|+|||||++|.+++. .+++||
T Consensus 15 ~~~lki~~lfvil~~slig~~lP~i~~~~~~~~~~~~~~~~~k~FagGVfLATafvHLLp~a~e~l~~~cl~~~~~~~yP 94 (324)
T TIGR00820 15 ALKLKIVAIFSILLASVIGVMFPLIGKNVPSLRPEGNFFFVAKAFAAGVILATGFMHVLPEAFEMLSSPCLESTPWGKFP 94 (324)
T ss_pred ccccHHHHHHHHHHHHHHHHhhHHHhhhccccCCCcchhHHHHHhccceeeeeeeeeeccHHHHhhcCcccCCCCCCcCC
Confidence 4455999999999999999999976543 45789999999999999999999999999999763 446899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCCCCC-CcccccCCCCCCCCCCCCCCCccccCCCCCCCCCCcc--cccccccc
Q 044590 115 FAFMLACAGYLFTMLADCAISFVLDKKRDASN-ADLERQGGLEGGKSSHHSATSQSVSQGQNGTDGHSSK--FSLTAASS 191 (347)
Q Consensus 115 ~~~~~~~~Gf~l~~lle~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~--~~~~~~~~ 191 (347)
++.+++++|+++++++|++...+.+++.++++ .+.+.++.+ .. +.+. +..+ ..+++.+.+.+. +.....++
T Consensus 95 ~~~~i~~~g~~l~~~iE~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~ 168 (324)
T TIGR00820 95 FAGFIAMISAILTLLVDLFATSYYERKHGKGDHGSKEIKVGD-GE--EGTA-GGTK--HGHEYYEDHVHTNSEVVQLLRQ 168 (324)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCcccccccc-cc--cCCC-CCCC--CCccccccccccccchhhHHHH
Confidence 99999999999999999998877654432211 111110000 00 0000 0000 000000000000 00001112
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCchHHHHHHHHHHHhhhHHHH
Q 044590 192 LGDSILLIVALCFHSVFEGIAIGVAETQADAWKALWTICLHKIFAAIAMGIALLRMIPDRPFLSCVAYAFAFAISSPVGV 271 (347)
Q Consensus 192 ~~~~~ll~~al~~Hs~~EGlalGv~~~~~~~~~l~~aI~lHki~eg~alg~~L~~~~~~~~~~~~~~~~~~fsl~tPiG~ 271 (347)
...++++.+|+++||++||+++|++.+.+..+.+++||++||+|||+++|.++.+.+.++ ++.+.++++|+++||+|+
T Consensus 169 ~~~~~~l~~gl~~Hs~~eGlalG~~~~~~~~~~l~~Ai~~Hk~~eg~alg~~l~~~~~~~--~~~~~~~~~fsl~tPiG~ 246 (324)
T TIGR00820 169 RVVAQVLELGIIVHSVVIGLSLGASQSPDTIKPLIAALSFHQFFEGLGLGGCISQAEFKC--KSVTIMCTFFAVTTPLGI 246 (324)
T ss_pred HHHHHHHHHHHHhcchhhhhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHHHhccCCCc--hHHHHHHHHHHHhhHHHH
Confidence 224789999999999999999999988778999999999999999999999999886443 457889999999999999
Q ss_pred HHHHHhhhcCC--CCchhHHHHHHHHhhhHHHHHHHHHHhhhcccCCCC-CCCCcchHHHHHHHHHHHHHHHHHHhhc
Q 044590 272 AIGIIIDATTQ--GPVADWIFAISMGLACGVFIYVSINHLLSKGYTPQK-TVSVDTPNYKFLAVVLGVGVIAVVMIWD 346 (347)
Q Consensus 272 ~iG~~i~~~~~--~~~~~~~~~il~alAaG~flYVa~~eLlp~~~~~~~-~~~~~~~~~~~~~~~lG~~~ma~l~~w~ 346 (347)
+||+++.+.++ ++...++.++++++|+|+|+||++.|++|+++..++ +.+.++++++++++++|+++|+++++|+
T Consensus 247 ~iG~~~~~~~~~~~~~~~~~~gil~~~aaG~flYv~~~Ell~~e~~~~~~~~~~~~~~~~~~~~~~G~~~Ma~l~~wa 324 (324)
T TIGR00820 247 AIGMGISSSYDDSSPTALIVEGVLNAASAGILIYMALVDLLAADFMHPKMQSNLRLQIMAYIALLLGAGLMSLLAKWA 324 (324)
T ss_pred HHHHHHhcccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999976543 345567899999999999999999999999986543 2334567899999999999999999996
No 3
>PLN02159 Fe(2+) transport protein
Probab=100.00 E-value=1.6e-48 Score=372.64 Aligned_cols=282 Identities=23% Similarity=0.413 Sum_probs=219.4
Q ss_pred CCcchHHHHHHHHHHHHHHHHhhhhccccccc------chhHHHHHhhhhhhHHHHHHHHHhcHhHHHHhccC-----CC
Q 044590 42 RSKPLILVKIWCLMIIFVGTFVGGVSPYFLKW------NEGFLVLGTQFAGGVFLGTALMHFLSDANETFGDL-----TS 110 (347)
Q Consensus 42 ~~~~l~~~ki~~l~~i~~~t~~G~~iP~~~~~------~~~~l~~~~~faaGvlLg~a~~hLLPea~e~~~~~-----~~ 110 (347)
++.++ |+++++++++.|++|+++|++.|+ +++.+.+++||++||+|+|+|+|||||++|.+++. .+
T Consensus 42 ~~~~l---ki~al~vil~~sllg~~lP~~~~~~~~~~~~~~~~~~~~~FagGV~Lat~flHLLp~a~e~l~~~cl~~~~~ 118 (337)
T PLN02159 42 KALPL---KIIAIVAILTTSMIGVTAPLFSRYVSFLRPDGNIFTIVKCFASGIILGTGFMHVLPDSFEMLSSKCLEDNPW 118 (337)
T ss_pred hccch---HHHHHHHHHHHHHHHHHHHHHHHHccccCCchhHHHHHHHHhhhHhHHHHHHHhhhHHHHhhhchhhcCCCc
Confidence 46666 999999999999999999987753 56789999999999999999999999999999853 35
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcccccCCCCCCCCCCCCCCCccccCCCCCCCCCCccccccccc
Q 044590 111 KEYPFAFMLACAGYLFTMLADCAISFVLDKKRDASNADLERQGGLEGGKSSHHSATSQSVSQGQNGTDGHSSKFSLTAAS 190 (347)
Q Consensus 111 ~~~p~~~~~~~~Gf~l~~lle~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~ 190 (347)
++||++.+++++|+++++++|++..++.+++.++. .+.++ ++.++++. .. . ..+ + .++. ..+
T Consensus 119 ~~yP~~~~i~~~g~~l~~liE~~~~~~~~~~~~~~---~~~~h---~h~~~~~~-~~----~--~~~--~-~~~~--~~r 180 (337)
T PLN02159 119 HKFPFAGFVAMLSGLVTLAIDSMATSLYTSKNSVG---PMPDH---GHSHGHGV-VL----K--TKD--D-GNAQ--LLR 180 (337)
T ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHHHhhccCCC---ccccc---Cccccccc-cc----c--ccc--c-cchh--HHH
Confidence 68999999999999999999999887654332110 00000 00000000 00 0 000 0 0000 011
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCchHHHHHHHHHHHhhhHHH
Q 044590 191 SLGDSILLIVALCFHSVFEGIAIGVAETQADAWKALWTICLHKIFAAIAMGIALLRMIPDRPFLSCVAYAFAFAISSPVG 270 (347)
Q Consensus 191 ~~~~~~ll~~al~~Hs~~EGlalGv~~~~~~~~~l~~aI~lHki~eg~alg~~L~~~~~~~~~~~~~~~~~~fsl~tPiG 270 (347)
+...++++.+|+++||++||+++|++.+.+..+.+++||++||+|||+++|.++.+.+.+ .++.+.++++|+++||+|
T Consensus 181 ~~~~a~~l~~gl~lHS~~eGlalG~~~~~~~~~~l~~AI~~Hk~~eg~aLg~~L~~~~~~--~~~~~~~~~~fal~tPiG 258 (337)
T PLN02159 181 YRVIAMVLELGIIVHSVVIGLSLGATNDTCTIKGLIAALCFHQMFEGMGLGGCILQAEYT--NVKKFLMAFFFAVTTPFG 258 (337)
T ss_pred HHHHHHHHHHHHHHHHHHhchhhhcCCCchhHHHHHHHHHHHhhHHHHHHHHHHHhccCc--HHHHHHHHHHHHHhcHHH
Confidence 112368999999999999999999998777777899999999999999999999998644 346788899999999999
Q ss_pred HHHHHHhhhcCC--CCchhHHHHHHHHhhhHHHHHHHHHHhhhcccCCCC-CCCCcchHHHHHHHHHHHHHHHHHHhhc
Q 044590 271 VAIGIIIDATTQ--GPVADWIFAISMGLACGVFIYVSINHLLSKGYTPQK-TVSVDTPNYKFLAVVLGVGVIAVVMIWD 346 (347)
Q Consensus 271 ~~iG~~i~~~~~--~~~~~~~~~il~alAaG~flYVa~~eLlp~~~~~~~-~~~~~~~~~~~~~~~lG~~~ma~l~~w~ 346 (347)
+++|+.+.+.++ +....++.++++++|+|+|+||++.|++|+++..++ +.+.++|+++++++++|+++|+++++|+
T Consensus 259 ~~iG~~v~~~~~~~~~~~~~~~gil~a~aaG~flYv~~~Ell~~e~~~~~~~~~~~~~~~~~~~l~~G~~~Mall~~wa 337 (337)
T PLN02159 259 IFLGIALSSIYRDNSPTALITVGLLNACSAGLLIYMALVDLLAAEFMGPKLQGSIKLQIKCFFAALLGCGGMSIVAKWA 337 (337)
T ss_pred HHHHHHHHhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 999999976543 334558899999999999999999999999986553 2333457899999999999999999996
No 4
>PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [].; GO: 0046873 metal ion transmembrane transporter activity, 0030001 metal ion transport, 0055085 transmembrane transport, 0016020 membrane
Probab=100.00 E-value=1.2e-45 Score=352.37 Aligned_cols=291 Identities=27% Similarity=0.493 Sum_probs=216.9
Q ss_pred HHHHHHHHHHHHHHhhhhccccc------ccchhHHHHHhhhhhhHHHHHHHHHhcHhHHHHhccCC-----CCCCcHHH
Q 044590 49 VKIWCLMIIFVGTFVGGVSPYFL------KWNEGFLVLGTQFAGGVFLGTALMHFLSDANETFGDLT-----SKEYPFAF 117 (347)
Q Consensus 49 ~ki~~l~~i~~~t~~G~~iP~~~------~~~~~~l~~~~~faaGvlLg~a~~hLLPea~e~~~~~~-----~~~~p~~~ 117 (347)
+|+++++++++.+++|+++|+++ |.+++++.+++||++|+||+++|+||+||++|.+++.. ..+||++.
T Consensus 3 ~ki~~~~~i~~~s~lg~~~P~~~~~~~~~~~~~~~l~~~~~fa~GvlL~~a~~hLLPea~~~~~~~~~~~~~~~~~~~~~ 82 (317)
T PF02535_consen 3 LKIVAILAIFIVSLLGGLLPLLIRKFSKNRLNKRILSLLNAFAAGVLLGTAFLHLLPEAIEALESSGCFGEFGHSYPLAF 82 (317)
T ss_pred eehHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHHcCchhhcccccccccccccchhhhHH
Confidence 59999999999999999999987 34688999999999999999999999999999886542 24579999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCCCCC--cccccCC---CCCCCCCC-----CCCCCccccCCCCCCCC---CCccc
Q 044590 118 MLACAGYLFTMLADCAISFVLDKKRDASNA--DLERQGG---LEGGKSSH-----HSATSQSVSQGQNGTDG---HSSKF 184 (347)
Q Consensus 118 ~~~~~Gf~l~~lle~i~~~~~~~~~~~~~~--~~~~~~~---~~~~~~~~-----~~~~~~~~~~~~~~~~~---h~~~~ 184 (347)
+++++||++++++|++++...++.+.+++. +.+.++. ++....++ +..+....++...++++ +.++.
T Consensus 83 ~~~~~Gfl~~~~ie~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (317)
T PF02535_consen 83 LIFLVGFLLFFFIERILHSIFEHDHSHSHDHSHSHSSSELNSDEPSNSVSSSEIEDDSNSEHSDQNSHHSHSSHSHSHHD 162 (317)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccccccccccccccccccccccccCccccccccCCccccccccccccccccccccccc
Confidence 999999999999999998775542111111 1000000 00000000 00000000000000000 00111
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCchHHHHHHHHHHH
Q 044590 185 SLTAASSLGDSILLIVALCFHSVFEGIAIGVAETQADAWKALWTICLHKIFAAIAMGIALLRMIPDRPFLSCVAYAFAFA 264 (347)
Q Consensus 185 ~~~~~~~~~~~~ll~~al~~Hs~~EGlalGv~~~~~~~~~l~~aI~lHki~eg~alg~~L~~~~~~~~~~~~~~~~~~fs 264 (347)
..++.+....++++++++++||++||+++|++.+.+.+|.++++|++||+||+++++.++.+.+.+ .++++.+.++|+
T Consensus 163 ~~~~~~~~~~~~~l~~~~~~Hs~~eGl~ig~~~~~~~~~~~~~ai~~Hk~~e~~~~~~~l~~~~~~--~~~~~~~~~~~s 240 (317)
T PF02535_consen 163 DKSGVSQNIRALILLIALSIHSFFEGLAIGAAFSSDSGWSLFIAIILHKIPEGFALGSILVKAGFS--KRKALLLLLLFS 240 (317)
T ss_pred ccchhhhhHHHHHHHHHHHhhcchhhhhhhcchhhhhHHHHHHHHHHhHhHHHhhhhhhhhhhccc--cchhhHHHHHHH
Confidence 111111113488999999999999999999998877899999999999999999999999998654 346788999999
Q ss_pred hhhHHHHHHHHHhhhcCCCCchhHHHHHHHHhhhHHHHHHHHHHhhhcccCCCCCCCCcchHHHHHHHHHHHHHHHHHH
Q 044590 265 ISSPVGVAIGIIIDATTQGPVADWIFAISMGLACGVFIYVSINHLLSKGYTPQKTVSVDTPNYKFLAVVLGVGVIAVVM 343 (347)
Q Consensus 265 l~tPiG~~iG~~i~~~~~~~~~~~~~~il~alAaG~flYVa~~eLlp~~~~~~~~~~~~~~~~~~~~~~lG~~~ma~l~ 343 (347)
+++|+|+++|+.+....++...+++.++++|+++|+|+||++.|++|++++.+++ ++.+..+++++++|+++|++++
T Consensus 241 l~~piG~~ig~~~~~~~~~~~~~~~~~~~~a~aaG~~lyv~~~ell~~~~~~~~~--~~~~~~~~~~~~~G~~~~~~la 317 (317)
T PF02535_consen 241 LSTPIGALIGIAISNSGSSSSSDIVSGILLAFAAGTFLYVAFVELLPEEFHNKHS--RKSRLLKFLGFLIGFLLMALLA 317 (317)
T ss_pred HHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc--hHHHHHHHHHHHHHHHHHHHHC
Confidence 9999999999999444445677899999999999999999999999999875532 4578999999999999999874
No 5
>PRK04201 zinc transporter ZupT; Provisional
Probab=100.00 E-value=3.5e-34 Score=267.49 Aligned_cols=251 Identities=20% Similarity=0.284 Sum_probs=189.9
Q ss_pred HHHHHHHHHHHHhhhhcccccc-cchhHHHHHhhhhhhHHHHHHHHHhcHhHHHHhccCCC--CCCcHHHHHHHHHHHHH
Q 044590 51 IWCLMIIFVGTFVGGVSPYFLK-WNEGFLVLGTQFAGGVFLGTALMHFLSDANETFGDLTS--KEYPFAFMLACAGYLFT 127 (347)
Q Consensus 51 i~~l~~i~~~t~~G~~iP~~~~-~~~~~l~~~~~faaGvlLg~a~~hLLPea~e~~~~~~~--~~~p~~~~~~~~Gf~l~ 127 (347)
+...++..+++.+|++++++.+ .+++++.++++||+|+|++++++|++||++|.+++... ..++.....+.+|++++
T Consensus 8 ~~~~~l~~~~t~lGal~~~~~~~~~~~~l~~~lafAaGvml~~~~~~LiPea~~~~~~~~~~~~~~~~~~~~~~~G~ll~ 87 (265)
T PRK04201 8 LLLTLLAGLATGIGSLIAFFGKKPNNRFLSFSLGFAAGVMLYVSFMEILPKALAALTEAYGEGMGPWLGYGAFFGGILGI 87 (265)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHH
Confidence 3444566778889999988765 58899999999999999999999999999997653211 23345566788999999
Q ss_pred HHHHHHHHHHhhccCCCCCCcccccCCCCCCCCCCCCCCCccccCCCCCCCCCCcccccccccchhhHHHHHHHHHHHHH
Q 044590 128 MLADCAISFVLDKKRDASNADLERQGGLEGGKSSHHSATSQSVSQGQNGTDGHSSKFSLTAASSLGDSILLIVALCFHSV 207 (347)
Q Consensus 128 ~lle~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~ll~~al~~Hs~ 207 (347)
+++|+..++ ++.+ +.+++++ ++ + ++ ++ +.+-.+.++++.+++++||+
T Consensus 88 ~~ld~~~~~----~~~~-----~~~~~~~-----~~--~-----------~~--~~----~~~~~~~~~~~~~a~~lH~~ 134 (265)
T PRK04201 88 FLIDRLVPH----ENPH-----ELMQKEE-----ME--F-----------QQ--PL----PKSLKRTGILTALAISIHNF 134 (265)
T ss_pred HHHHHhccc----cCcc-----ccccccc-----cc--c-----------cc--cc----hHHHHHHHHHHHHHHHHHhc
Confidence 999987641 1000 0000000 00 0 00 00 01112356888999999999
Q ss_pred HHHHHHhhc--ccchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCchHHHHHHHHHHHhhhHHHHHHHHHhhhcCCCCc
Q 044590 208 FEGIAIGVA--ETQADAWKALWTICLHKIFAAIAMGIALLRMIPDRPFLSCVAYAFAFAISSPVGVAIGIIIDATTQGPV 285 (347)
Q Consensus 208 ~EGlalGv~--~~~~~~~~l~~aI~lHki~eg~alg~~L~~~~~~~~~~~~~~~~~~fsl~tPiG~~iG~~i~~~~~~~~ 285 (347)
+||+++|++ .+.+.++.+++||.+||+||+++++.++.+.+. ++++++.+++++++++|+|+++|+.+.+.. .
T Consensus 135 ~eGlalg~~~~~~~~~g~~~~~aI~~H~iPeg~a~~~~l~~~~~--s~~~~~~~~~~~~l~~p~G~~~g~~~~~~~---~ 209 (265)
T PRK04201 135 PEGIATFVAALSNPELGFPIALAIAIHNIPEGIAVAVPVYYATG--SKKKAFLYSFLSGLAEPLGAVLGYLLLGPF---I 209 (265)
T ss_pred chhhhhhhhhhcchhhHHHHHHHHHHhcCcHHHHHHHHHHHccC--cHHHHHHHHHHHHHHHHHHHHHHHHHHccc---c
Confidence 999999984 466678899999999999999999999998764 355788899999999999999999886421 2
Q ss_pred hhHHHHHHHHhhhHHHHHHHHHHhhhcccCCCCCCCCcchHHHHHHHHHHHHHHHHHHhh
Q 044590 286 ADWIFAISMGLACGVFIYVSINHLLSKGYTPQKTVSVDTPNYKFLAVVLGVGVIAVVMIW 345 (347)
Q Consensus 286 ~~~~~~il~alAaG~flYVa~~eLlp~~~~~~~~~~~~~~~~~~~~~~lG~~~ma~l~~w 345 (347)
.+.+.++++++++|+|+||++.|++|+..+.+ ++..+..++++|+.+|++...+
T Consensus 210 ~~~~~~~~l~~aaG~~lyv~~~el~pea~~~~------~~~~~~~~~~~G~~~m~~~~~~ 263 (265)
T PRK04201 210 SPVVMGAIFAAVAGIMVFISLDELLPAAKEYG------PHHLPSYGLIAGMAVMALSLVL 263 (265)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC------cchHHHHHHHHHHHHHHHHHHH
Confidence 35678999999999999999999999975432 2346789999999999987754
No 6
>COG0428 Predicted divalent heavy-metal cations transporter [Inorganic ion transport and metabolism]
Probab=99.95 E-value=7.1e-27 Score=217.68 Aligned_cols=248 Identities=23% Similarity=0.310 Sum_probs=188.9
Q ss_pred HHHHHHHHHHHHHHHHhhhhccccc--ccchhHHHHHhhhhhhHHHHHHHHHhcHhHHHHhccCCC---CCCcHHHHHHH
Q 044590 47 ILVKIWCLMIIFVGTFVGGVSPYFL--KWNEGFLVLGTQFAGGVFLGTALMHFLSDANETFGDLTS---KEYPFAFMLAC 121 (347)
Q Consensus 47 ~~~ki~~l~~i~~~t~~G~~iP~~~--~~~~~~l~~~~~faaGvlLg~a~~hLLPea~e~~~~~~~---~~~p~~~~~~~ 121 (347)
...++..-+...+.|.+|...-++. |.++++......|++||++.+++++++|++.+....... ..+| ...-+.
T Consensus 7 ~l~~~~~~ll~~~~t~lG~~~~~~~~~~~~~~~~~~~~gFa~Gvm~~as~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~ 85 (266)
T COG0428 7 LLFALLLGLLAGLATALGALLVVLAVRKVSPRVLDILLGFAAGVMLAASFTSLLPPAIEASGVLGDSTHEFLP-ALAGFL 85 (266)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHhhcccchHHHHHHHhhhhhHHHHHHHHHhcchHHhhhccccccchhhHH-HHHHHH
Confidence 3445555566677888888777663 558899999999999999999999999999987654311 1122 223356
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCCCcccccCCCCCCCCCCCCCCCccccCCCCCCCCCCcccccccccchhhHHHHHHH
Q 044590 122 AGYLFTMLADCAISFVLDKKRDASNADLERQGGLEGGKSSHHSATSQSVSQGQNGTDGHSSKFSLTAASSLGDSILLIVA 201 (347)
Q Consensus 122 ~Gf~l~~lle~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~ll~~a 201 (347)
.|.+++..+|+++. |.|...+.++ ++ ..+++++++.+++.++
T Consensus 86 ~G~~~~~~~d~l~~--------h~h~~~~~~~--------~~----------------------~~~~~~~~~~~l~~la 127 (266)
T COG0428 86 LGVLFIFLLDRLVP--------HEHEGKSVEG--------LE----------------------GLRKPNLRRGFLLALA 127 (266)
T ss_pred HHHHHHHHHHHcCC--------ccCCCCCccc--------cc----------------------cccCcchhHHHHHHHH
Confidence 67777888887653 1110000000 00 0012224578999999
Q ss_pred HHHHHHHHHHHHhhccc--chhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCchHHHHHHHHHHHhhhHHHHHHHHHhhh
Q 044590 202 LCFHSVFEGIAIGVAET--QADAWKALWTICLHKIFAAIAMGIALLRMIPDRPFLSCVAYAFAFAISSPVGVAIGIIIDA 279 (347)
Q Consensus 202 l~~Hs~~EGlalGv~~~--~~~~~~l~~aI~lHki~eg~alg~~L~~~~~~~~~~~~~~~~~~fsl~tPiG~~iG~~i~~ 279 (347)
+++|||+||+++|++.. .+.++.+.+||.+||+|||++++.++++.+ +++++++.+..+.++.+|+|+++|+.+..
T Consensus 128 i~iHnfpEGlai~va~~~~~~~gi~~alaI~ihnipEG~av~~pL~~~~--~s~~~~l~~~~lsg~~~~lgavig~~~~~ 205 (266)
T COG0428 128 ISLHNFPEGLAIGVAFLSNPSLGIALALAIAIHNIPEGLAVALPLAGAG--RSRLKALLVAVLSGLAEPLGAVIGAYLLG 205 (266)
T ss_pred HHHhccchhHHHHHHHhccchHHHHHHHHHHHhccccHHHHHHHHHhcC--CchHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 99999999999999853 348899999999999999999999999986 55678999999999999999999999875
Q ss_pred cCCCCchhHHHHHHHHhhhHHHHHHHHHHhhhcccCCCCCCCCcchHHHHHHHHHHHHHHHHHH
Q 044590 280 TTQGPVADWIFAISMGLACGVFIYVSINHLLSKGYTPQKTVSVDTPNYKFLAVVLGVGVIAVVM 343 (347)
Q Consensus 280 ~~~~~~~~~~~~il~alAaG~flYVa~~eLlp~~~~~~~~~~~~~~~~~~~~~~lG~~~ma~l~ 343 (347)
..+ ..+.++.+++++|.++|+++.|++|+.++.+ ..++...+.++.+|+.+|+++.
T Consensus 206 ~~~----~~~l~~~la~aaG~mv~v~~~eliPea~~~~----~~~~~~~~~~~~~G~~~~~~l~ 261 (266)
T COG0428 206 ISS----PLVLPFALAFAAGAMVYVVVDELLPEAKRHG----GGSEKLATAGLFAGFLVMAVLD 261 (266)
T ss_pred hch----HHHHHHHHHHHhhcchhhhHHHHhhHHHhcC----CCchHHHHHHHHHHHHHHHHHH
Confidence 432 4678999999999999999999999987642 2357778889999999999875
No 7
>KOG2693 consensus Putative zinc transporter [Inorganic ion transport and metabolism]
Probab=99.87 E-value=2e-22 Score=198.43 Aligned_cols=295 Identities=14% Similarity=0.204 Sum_probs=184.6
Q ss_pred cchHHHHHHHHHHHHHHHHhhhh-ccccccc--chhHHHHHhhhhhhHHHHHHHHHhcHhHHHHhccCCCCCCcHHHHHH
Q 044590 44 KPLILVKIWCLMIIFVGTFVGGV-SPYFLKW--NEGFLVLGTQFAGGVFLGTALMHFLSDANETFGDLTSKEYPFAFMLA 120 (347)
Q Consensus 44 ~~l~~~ki~~l~~i~~~t~~G~~-iP~~~~~--~~~~l~~~~~faaGvlLg~a~~hLLPea~e~~~~~~~~~~p~~~~~~ 120 (347)
..+|..-+.|.+++.+..++|-. +|...+. .+..+.+..+++.|.+++.+++|++|++............+.....+
T Consensus 130 ~~~w~~g~~a~~lisl~~~l~l~lvP~~~~~~~~~~~l~~l~a~a~gtL~gDa~lhLiP~~l~~~~~~~~~~s~~~~~~~ 209 (453)
T KOG2693|consen 130 KELWLYGILATLLISLAPLLGLLLVPLRKNSKKKLELLIFLLALAVGTLLGDALLHLIPEALGFHSHLSNGVSHVTSLAM 209 (453)
T ss_pred eeeEEechHHHHHHHHHHhhheeeccccccchhHHHHHHHHHHHHHhhhhHHHHhhhCchhcccccCccCCcccccchhh
Confidence 57788889999999999998865 5554332 46788899999999999999999999998854432110000000111
Q ss_pred HHHHH-------------------HHHHHHHHHHHHhhccC--CCCCCcccccCCCCCCCCCCCCCCCccccCCCCCCCC
Q 044590 121 CAGYL-------------------FTMLADCAISFVLDKKR--DASNADLERQGGLEGGKSSHHSATSQSVSQGQNGTDG 179 (347)
Q Consensus 121 ~~Gf~-------------------l~~lle~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (347)
..|.. .++..++......+... ++.+++.....+..+....++.+... +....+...
T Consensus 210 ~~g~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~g~~~~~gh~h~~~~~~~~~~e~~~~~~~~~~~--d~~~~~~~~ 287 (453)
T KOG2693|consen 210 TGGKYHFFSNESNLSIFLAVLGVSLLFVTEKNMRALKGGGKHHGHSHGHSNTYNPGSEKITLNVKDGVG--DSVSLSSSS 287 (453)
T ss_pred cccceeeecccccceeeeeeechHHhhccccchhhccCCCCCCCccCCcCCCcCcccccccccccccCC--CccccCCcc
Confidence 11211 11122221111100000 00000000000000000000000000 000000000
Q ss_pred CCc-ccccccccchhhHHHHHHHHHHHHHHHHHHHhhccc--chhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCchHHH
Q 044590 180 HSS-KFSLTAASSLGDSILLIVALCFHSVFEGIAIGVAET--QADAWKALWTICLHKIFAAIAMGIALLRMIPDRPFLSC 256 (347)
Q Consensus 180 h~~-~~~~~~~~~~~~~~ll~~al~~Hs~~EGlalGv~~~--~~~~~~l~~aI~lHki~eg~alg~~L~~~~~~~~~~~~ 256 (347)
..+ .++.....-...+|+.+++..+|||.||+|+|.+.+ ...+|.+.+|+.+||+|+.+...+.|+|++ ...+++
T Consensus 288 ~~~~~~~~~~~~l~~~aymil~gD~~HNFtDGLAiGAaF~~s~~~G~sTsiAVlcHElPHELGDFAILl~sG--~s~kqA 365 (453)
T KOG2693|consen 288 FEHKLEEFEVEELKKVAYMILAGDGLHNFTDGLAIGAAFTSSLLHGISTSLAVLCHEFPHELGDFAILLRSG--LSVKQA 365 (453)
T ss_pred hhcccccccccchhhHhHHHHhccccccchhhhhhccccccccchhHHHHHHHHHHhccHHHHHHHHHHHcC--CcHHHH
Confidence 000 111111112246899999999999999999999853 446899999999999999999999999997 446689
Q ss_pred HHHHHHHHhhhHHHHHHHHHhhhcCCCCchhHHHHHHHHhhhHHHHHHHHHHhhhcccCCCCCCC--CcchHHHHHHHHH
Q 044590 257 VAYAFAFAISSPVGVAIGIIIDATTQGPVADWIFAISMGLACGVFIYVSINHLLSKGYTPQKTVS--VDTPNYKFLAVVL 334 (347)
Q Consensus 257 ~~~~~~fsl~tPiG~~iG~~i~~~~~~~~~~~~~~il~alAaG~flYVa~~eLlp~~~~~~~~~~--~~~~~~~~~~~~l 334 (347)
+.++++.++++-+|..+|+.+.+..+. -+..+.+++++|.|+||+..+++||..+.+++.+ +.....+.++++.
T Consensus 366 l~lnllsal~a~~G~~ig~~~~~~~~~----~~~~~I~a~taG~FlYIAl~~m~Pem~~~~~~~~~~~~~~~lq~~gil~ 441 (453)
T KOG2693|consen 366 LLLNLLSALTAFAGLAIGLVLGAGDEE----ELSSWILAFTAGMFLYIALVDVLPEMLESKNSVKKRKFCFALQIFGILA 441 (453)
T ss_pred HHHHHHhHHHHHhhhheeEEecCCCcc----chHHHHHHHhcCcEEEEEehhhchhhhhccccchhHHHHHHHHHHHHHh
Confidence 999999999999999999988764222 2345667799999999999999999866543221 4556788899999
Q ss_pred HHHHHHHHHhhc
Q 044590 335 GVGVIAVVMIWD 346 (347)
Q Consensus 335 G~~~ma~l~~w~ 346 (347)
|+.+|.++++++
T Consensus 442 G~~~ml~ia~~e 453 (453)
T KOG2693|consen 442 GFTIMLLIALYE 453 (453)
T ss_pred hhHHHhhhhccC
Confidence 999999998764
No 8
>KOG2694 consensus Putative zinc transporter [Inorganic ion transport and metabolism]
Probab=99.84 E-value=1.5e-19 Score=162.09 Aligned_cols=260 Identities=18% Similarity=0.149 Sum_probs=169.4
Q ss_pred hhhhcccccc---------c--chhHHHHHhhhhhhHHHHHHHHHhcHhHHHHhccCCCCC--CcHHHHHHHHHHHHHHH
Q 044590 63 VGGVSPYFLK---------W--NEGFLVLGTQFAGGVFLGTALMHFLSDANETFGDLTSKE--YPFAFMLACAGYLFTML 129 (347)
Q Consensus 63 ~G~~iP~~~~---------~--~~~~l~~~~~faaGvlLg~a~~hLLPea~e~~~~~~~~~--~p~~~~~~~~Gf~l~~l 129 (347)
+.|++|.++- . .++.+..+.+|+-|-+||..|+|+||||.|.-+..+..+ ...-.+.+.+|++.+.+
T Consensus 80 lsGifPl~~iP~e~~~~l~s~ag~~rL~~LLsFAiGgLLgdVFLHLLPEAwe~~n~~p~~e~sl~siGLwVlaGiLtF~~ 159 (361)
T KOG2694|consen 80 LSGIFPLFLIPAEIHVLLSSSAGQRRLNLLLSFAIGGLLGDVFLHLLPEAWESNNQDPSSENSLSSIGLWVLAGILTFSL 159 (361)
T ss_pred hcccceeeeechhhhhhccCchhHHHHHHHHHHHHhhHHHHHHHHhCHHHHhccCCCCCCCCchhhhhHHHHHHHHHHHH
Confidence 3467787641 1 457788899999999999999999999998653322222 22237889999999999
Q ss_pred HHHHHHHHhhccCCCCCCcccccCCCCCCCCCCCC---CCCcccc-CCCCCCCCCCcccccccccchhhHHHHHHHHHHH
Q 044590 130 ADCAISFVLDKKRDASNADLERQGGLEGGKSSHHS---ATSQSVS-QGQNGTDGHSSKFSLTAASSLGDSILLIVALCFH 205 (347)
Q Consensus 130 le~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~h~~~~~~~~~~~~~~~~ll~~al~~H 205 (347)
+|++...--+.+.++ ..+.+..+. ..-..|- +.++.. +...+. ++....+++..++-.+.
T Consensus 160 ieK~f~ss~EE~~~q-----------~p~~~~~~ac~~~~g~~c~~r~~~q~---~~~~~~--q~~kvagYLNLlAN~iD 223 (361)
T KOG2694|consen 160 IEKLFASSEEEQHKQ-----------SPSAHFLNACGGACGKVCFLREQEQK---SKERKE--QPKKVAGYLNLLANIID 223 (361)
T ss_pred HHHHHhcchhhcccc-----------CCCcchhhHhhhccccceecchhhcc---cccccc--cchhHHHHHHHHHHhhh
Confidence 999873211100000 000000000 0000110 000000 000000 11124588999999999
Q ss_pred HHHHHHHHhhcc--cchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCchHHHHHHHHHHHhhhHHHHHHHHHhhhcCCC
Q 044590 206 SVFEGIAIGVAE--TQADAWKALWTICLHKIFAAIAMGIALLRMIPDRPFLSCVAYAFAFAISSPVGVAIGIIIDATTQG 283 (347)
Q Consensus 206 s~~EGlalGv~~--~~~~~~~l~~aI~lHki~eg~alg~~L~~~~~~~~~~~~~~~~~~fsl~tPiG~~iG~~i~~~~~~ 283 (347)
||..|+|++.+. +...++..++||.+|++|+.++..+.|+|++-+ +|.+....+.-+..--+|..+.+-- .+.+.
T Consensus 224 NFtHGLAVa~SFLVS~k~GiltT~aILLHEIPHEvgDFAILLRagF~--rw~Aa~aQL~TA~~GlLGalvAi~g-~~g~~ 300 (361)
T KOG2694|consen 224 NFTHGLAVASSFLVSTKFGILTTIAILLHEIPHEVGDFAILLRAGFG--RWNAALAQLTTAAFGLLGALVAIHG-HTGNV 300 (361)
T ss_pred hhhhhhHHhhhhhhhhhhhHHHHHHHHHhhccchhhhhHHHHHhccc--hhHHHHHHHHHHHHHHhhhHHHhhc-CcCCc
Confidence 999999999874 445688899999999999999999999999644 4566555544444444444444321 12223
Q ss_pred CchhHHHHHHHHhhhHHHHHHHHHHhhhcccCCCCCCCCcchHHHHHHHHHHHHHHHHHHh
Q 044590 284 PVADWIFAISMGLACGVFIYVSINHLLSKGYTPQKTVSVDTPNYKFLAVVLGVGVIAVVMI 344 (347)
Q Consensus 284 ~~~~~~~~il~alAaG~flYVa~~eLlp~~~~~~~~~~~~~~~~~~~~~~lG~~~ma~l~~ 344 (347)
+.......+++-+.+|.|+||++++++|+-.+.. ..+..+.+++.++.|+++|+++..
T Consensus 301 pa~E~~tsw~lPFTaGGFL~IALv~vLPdll~Ee---~p~eslkQLl~lv~Gi~~M~~~sl 358 (361)
T KOG2694|consen 301 PAIETRTSWLLPFTAGGFLNIALVEVLPDLLAEE---SPVESLKQLLMLVTGILTMSFLSL 358 (361)
T ss_pred hhhhhhcceeeeeccCceeehhHHHhhhHhhhcc---CHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445556788899999999999999999876543 245778999999999999998864
No 9
>KOG3907 consensus ZIP-like zinc transporter proteins [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.70 E-value=5e-20 Score=163.57 Aligned_cols=247 Identities=20% Similarity=0.277 Sum_probs=169.8
Q ss_pred HHHHHHHHHHHhhhhcccccccchhHHHHHhhhhhhHHHHHHHHHhcHhHHHHhccC---------------------C-
Q 044590 52 WCLMIIFVGTFVGGVSPYFLKWNEGFLVLGTQFAGGVFLGTALMHFLSDANETFGDL---------------------T- 109 (347)
Q Consensus 52 ~~l~~i~~~t~~G~~iP~~~~~~~~~l~~~~~faaGvlLg~a~~hLLPea~e~~~~~---------------------~- 109 (347)
.....+++++.+.|.+|+.++.+++-+.+.+.+++|.+.++++..++||..+.+... +
T Consensus 8 lLssamlvgsylaG~IPL~~~~se~rl~lvtv~GAgll~gtAl~viIpegv~sly~~~~~~~~~g~~~~~~~~~~~vIp~ 87 (303)
T KOG3907|consen 8 LLSSAMLVGSYLAGSIPLYYILSEERLKLVTVLGAGLLVGTALTVIIPEGVSSLYVKIAVLSILGIGMLLGTSFMLVIPE 87 (303)
T ss_pred HHHHHHHHHHHHhcccceeeecchhheEEEEeecccceecceeEEEecccHHHHhhhHHHHhhhccchhcccccceeccc
Confidence 345678999999999999988877778888999999999999999999998876510 0
Q ss_pred ----------CCCCc-HHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcccccCCCCCCCCCCCCCCCccccCCCCCCC
Q 044590 110 ----------SKEYP-FAFMLACAGYLFTMLADCAISFVLDKKRDASNADLERQGGLEGGKSSHHSATSQSVSQGQNGTD 178 (347)
Q Consensus 110 ----------~~~~p-~~~~~~~~Gf~l~~lle~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (347)
..++. ...+....||++++++|++-.....+ ++. .+.
T Consensus 88 ~i~a~v~~~~~~~~~~~IG~slVLgfv~mLlVdqi~tv~~h~---------------------~v~-~~a---------- 135 (303)
T KOG3907|consen 88 GIKAEVEHDGHVGVHALIGFSLVLGFVFMLLVDQIGTVYVHS---------------------NVK-FQA---------- 135 (303)
T ss_pred cceeeeeecCCcChheeeeHHHHHHHHHHHhhhccccEEEec---------------------ccc-hhh----------
Confidence 01121 22344567888888888753221100 000 000
Q ss_pred CCCcccccccccchhhHHHHHHHHHHHHHHHHHHHhhcc---cchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCchHH
Q 044590 179 GHSSKFSLTAASSLGDSILLIVALCFHSVFEGIAIGVAE---TQADAWKALWTICLHKIFAAIAMGIALLRMIPDRPFLS 255 (347)
Q Consensus 179 ~h~~~~~~~~~~~~~~~~ll~~al~~Hs~~EGlalGv~~---~~~~~~~l~~aI~lHki~eg~alg~~L~~~~~~~~~~~ 255 (347)
.++...-.-..+|+.+|..-||+|+|.+. +.+..+..++||.+||.|++|++-.-|...+..| |.
T Consensus 136 ----------~rs~in~~t~tlgLvVHaaaDGVALGaaattn~~svqiIVfvAImlHKaPAafgLvSfll~e~l~r--~~ 203 (303)
T KOG3907|consen 136 ----------GRSIINHITVTLGLVVHAAADGVALGAAATTNNDSVQIIVFVAIMLHKAPAAFGLVSFLLHENLDR--WE 203 (303)
T ss_pred ----------hhhccccceeEEEEEEeeccccceecccccccCCcEEEeehhHHHHhcccHHHHHHHHHHHhhhHH--HH
Confidence 00000002346788999999999999653 2334667899999999999999988777654333 23
Q ss_pred HHHHHHHHHhhhHHHHHHHHHhhhcCCCCchhHHH--HHHHHhhhHHHHHHHHHHhhhcccCCCC----C--CCCcchHH
Q 044590 256 CVAYAFAFAISSPVGVAIGIIIDATTQGPVADWIF--AISMGLACGVFIYVSINHLLSKGYTPQK----T--VSVDTPNY 327 (347)
Q Consensus 256 ~~~~~~~fsl~tPiG~~iG~~i~~~~~~~~~~~~~--~il~alAaG~flYVa~~eLlp~~~~~~~----~--~~~~~~~~ 327 (347)
.-.-.++|++++|+|.++-+...... +.+.+|.. |++|-+++|+|+|+++++.+||.-+.+. . ....-+..
T Consensus 204 Irkhl~lFa~saPl~~ivt~lli~q~-s~~m~~~satGvlmLfSaGtfLYvatvhvlpe~~~~dh~l~vea~~g~~l~~~ 282 (303)
T KOG3907|consen 204 IRKHLVLFALSAPLGYIVTYLLILQH-SKTMLSESATGVLMLFSAGTFLYVATVHVLPELSHTDHSLSVEATGGAVLPHD 282 (303)
T ss_pred HhhheEEEeccCcHHHHHHHHhhhcc-ChhhhhhhhcceeeeecCCeeEEEEEEEEccccCCCCcccccccccccccchh
Confidence 33445789999999999888765433 34555555 9999999999999999999998643111 1 11133556
Q ss_pred HHHHHHHHHHHHHHHH
Q 044590 328 KFLAVVLGVGVIAVVM 343 (347)
Q Consensus 328 ~~~~~~lG~~~ma~l~ 343 (347)
....+++|..+-.++.
T Consensus 283 E~v~li~G~~iPlIis 298 (303)
T KOG3907|consen 283 ELVYLIIGALIPLIIS 298 (303)
T ss_pred HHHHHHHhHHHHHHHH
Confidence 6777888877766554
No 10
>KOG2474 consensus Zinc transporter and related ZIP domain-containing proteins [Inorganic ion transport and metabolism]
Probab=98.99 E-value=2.9e-10 Score=108.35 Aligned_cols=122 Identities=20% Similarity=0.362 Sum_probs=85.3
Q ss_pred cchhhHHHHHHHHHHHHHHHHH-HHhhcc-----cchh----HHH--HHHHHH---HHHHHHHHHHHHHHHhhCCCCchH
Q 044590 190 SSLGDSILLIVALCFHSVFEGI-AIGVAE-----TQAD----AWK--ALWTIC---LHKIFAAIAMGIALLRMIPDRPFL 254 (347)
Q Consensus 190 ~~~~~~~ll~~al~~Hs~~EGl-alGv~~-----~~~~----~~~--l~~aI~---lHki~eg~alg~~L~~~~~~~~~~ 254 (347)
+++++.-.++..+..|+.|||. +++++. +... .+. ..+.|. +||++|++++..+++..+.. ++
T Consensus 241 ~sw~~i~l~~~~~~~h~~P~g~~~I~va~~~alst~pE~Fe~~~ns~~a~Gf~v~li~nf~Eglavslpl~~a~~S--r~ 318 (406)
T KOG2474|consen 241 SSWRRIHLLTLSITVHNHPEGLIGIQVALGAALSTFPEGFESFYNSSLAIGFGVFLIHNFVEGLAVSLPLAGAGFS--RL 318 (406)
T ss_pred hhhHHHhhhcchhhcccCcchhhHHHHHHHhhhhcCcHHHHHHhccccccchhHHHHhcccccceeeeehhhhhhH--HH
Confidence 4455555778888889999987 666642 1111 111 233344 99999999999999988644 34
Q ss_pred HHHHHH-HHHHhhhHHHHHHHHHhhhcCCCCchhHHHHHHHHhhhHHHHHHHHHHhhhcccCCC
Q 044590 255 SCVAYA-FAFAISSPVGVAIGIIIDATTQGPVADWIFAISMGLACGVFIYVSINHLLSKGYTPQ 317 (347)
Q Consensus 255 ~~~~~~-~~fsl~tPiG~~iG~~i~~~~~~~~~~~~~~il~alAaG~flYVa~~eLlp~~~~~~ 317 (347)
++++|. ...++.-|+|..++..+.-.. ... ..++..++++|.++|+....++|+.-..+
T Consensus 319 ~afl~~a~~g~~s~~lGll~a~~v~la~--~ig--l~~~~~a~aaG~ml~~~~~~~i~~a~~~~ 378 (406)
T KOG2474|consen 319 KAFLYGAVLGGVSPPLGLLIAFAVFLAE--PIG--LLPYALAFAAGAMLYVVLDDIIPEAQRSD 378 (406)
T ss_pred HHHHHHHHhhcchhhHHHHHHHHHHhcC--ccc--hhhHHHHHhccceEEEEeccccccccccc
Confidence 666655 555577788888888774321 111 47899999999999999999999975443
No 11
>PRK04201 zinc transporter ZupT; Provisional
Probab=98.23 E-value=6e-06 Score=77.37 Aligned_cols=88 Identities=18% Similarity=0.231 Sum_probs=68.8
Q ss_pred hHHHHHHHHHHHhhhHHHHHHHHHhhhcCCCCchhHHHHHHHHhhhHHHHHHHHHHhhhcccCCCC--CCCCcchHHHHH
Q 044590 253 FLSCVAYAFAFAISSPVGVAIGIIIDATTQGPVADWIFAISMGLACGVFIYVSINHLLSKGYTPQK--TVSVDTPNYKFL 330 (347)
Q Consensus 253 ~~~~~~~~~~fsl~tPiG~~iG~~i~~~~~~~~~~~~~~il~alAaG~flYVa~~eLlp~~~~~~~--~~~~~~~~~~~~ 330 (347)
.+++++++++.++++++|.++++.+.. ..+...+.++++|+|+|+|+++.|++||.++.-+ ..+.........
T Consensus 4 ~~~a~~~~~l~~~~t~lGal~~~~~~~-----~~~~~l~~~lafAaGvml~~~~~~LiPea~~~~~~~~~~~~~~~~~~~ 78 (265)
T PRK04201 4 VSVALLLTLLAGLATGIGSLIAFFGKK-----PNNRFLSFSLGFAAGVMLYVSFMEILPKALAALTEAYGEGMGPWLGYG 78 (265)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc-----ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccHHHHHH
Confidence 346788899999999999999998753 2345689999999999999999999999875311 011124556678
Q ss_pred HHHHHHHHHHHHHhh
Q 044590 331 AVVLGVGVIAVVMIW 345 (347)
Q Consensus 331 ~~~lG~~~ma~l~~w 345 (347)
.+++|+.+|.++.++
T Consensus 79 ~~~~G~ll~~~ld~~ 93 (265)
T PRK04201 79 AFFGGILGIFLIDRL 93 (265)
T ss_pred HHHHHHHHHHHHHHh
Confidence 899999999998765
No 12
>PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [].; GO: 0046873 metal ion transmembrane transporter activity, 0030001 metal ion transport, 0055085 transmembrane transport, 0016020 membrane
Probab=96.26 E-value=0.027 Score=53.53 Aligned_cols=80 Identities=18% Similarity=0.283 Sum_probs=54.1
Q ss_pred hhhHHHHHHHHHhhhcCCCCchhHHHHHHHHhhhHHHHHHHHHHhhhcccCCCCCCCC-----cchHHHHHHHHHHHHHH
Q 044590 265 ISSPVGVAIGIIIDATTQGPVADWIFAISMGLACGVFIYVSINHLLSKGYTPQKTVSV-----DTPNYKFLAVVLGVGVI 339 (347)
Q Consensus 265 l~tPiG~~iG~~i~~~~~~~~~~~~~~il~alAaG~flYVa~~eLlp~~~~~~~~~~~-----~~~~~~~~~~~lG~~~m 339 (347)
+.+-+|..+-+.+...........+..+++++++|+|+.+++.||+||.++..+.... .........+++|+.++
T Consensus 13 ~~s~lg~~~P~~~~~~~~~~~~~~~l~~~~~fa~GvlL~~a~~hLLPea~~~~~~~~~~~~~~~~~~~~~~~~~~Gfl~~ 92 (317)
T PF02535_consen 13 IVSLLGGLLPLLIRKFSKNRLNKRILSLLNAFAAGVLLGTAFLHLLPEAIEALESSGCFGEFGHSYPLAFLIFLVGFLLF 92 (317)
T ss_pred HHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHHcCchhhcccccccccccccchhhhHHHHHHHHHHHH
Confidence 4455566665555432211234567889999999999999999999998765432111 11256778888999988
Q ss_pred HHHHh
Q 044590 340 AVVMI 344 (347)
Q Consensus 340 a~l~~ 344 (347)
..+-.
T Consensus 93 ~~ie~ 97 (317)
T PF02535_consen 93 FFIER 97 (317)
T ss_pred HHHHH
Confidence 87754
No 13
>COG0428 Predicted divalent heavy-metal cations transporter [Inorganic ion transport and metabolism]
Probab=93.49 E-value=0.3 Score=45.85 Aligned_cols=56 Identities=23% Similarity=0.298 Sum_probs=44.8
Q ss_pred hhHHHHHhhhhhhHHHHHHHHHhcHhHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHH
Q 044590 75 EGFLVLGTQFAGGVFLGTALMHFLSDANETFGDLTSKEYPFAFMLACAGYLFTMLADCAI 134 (347)
Q Consensus 75 ~~~l~~~~~faaGvlLg~a~~hLLPea~e~~~~~~~~~~p~~~~~~~~Gf~l~~lle~i~ 134 (347)
+.++.++.+|++|.|+..++-+++||+.+.=+ .++ +.......+||.++++.|...
T Consensus 209 ~~~l~~~la~aaG~mv~v~~~eliPea~~~~~---~~~-~~~~~~~~~G~~~~~~l~~~l 264 (266)
T COG0428 209 PLVLPFALAFAAGAMVYVVVDELLPEAKRHGG---GSE-KLATAGLFAGFLVMAVLDVLL 264 (266)
T ss_pred HHHHHHHHHHHhhcchhhhHHHHhhHHHhcCC---Cch-HHHHHHHHHHHHHHHHHHHhh
Confidence 48999999999999999999999999987411 111 245667788999999998764
No 14
>PRK11469 hypothetical protein; Provisional
Probab=90.01 E-value=3.9 Score=36.32 Aligned_cols=21 Identities=19% Similarity=0.409 Sum_probs=12.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhh
Q 044590 195 SILLIVALCFHSVFEGIAIGV 215 (347)
Q Consensus 195 ~~ll~~al~~Hs~~EGlalGv 215 (347)
.+++.++++.++|--|++.|.
T Consensus 6 i~llaialsmDaF~v~ia~G~ 26 (188)
T PRK11469 6 TVLLAFGMSMDAFAASIGKGA 26 (188)
T ss_pred HHHHHHHHHHHHHHHHHHhhh
Confidence 345566666666666555554
No 15
>TIGR00820 zip ZIP zinc/iron transport family. transport has not been characterized, but these systems probably function as secondary carriers.
Probab=87.64 E-value=1.6 Score=42.18 Aligned_cols=54 Identities=13% Similarity=0.120 Sum_probs=36.8
Q ss_pred HHHHHhhhhhhHHHHHHHHHhcHhHHHHhccC-CC-CCCcHHHHHHHHHHHHHHHHH
Q 044590 77 FLVLGTQFAGGVFLGTALMHFLSDANETFGDL-TS-KEYPFAFMLACAGYLFTMLAD 131 (347)
Q Consensus 77 ~l~~~~~faaGvlLg~a~~hLLPea~e~~~~~-~~-~~~p~~~~~~~~Gf~l~~lle 131 (347)
+...+.++++|.|+.++++|++|+-+.. ++. .. ++.-+.++...+|+.++.++-
T Consensus 266 ~~gil~~~aaG~flYv~~~Ell~~e~~~-~~~~~~~~~~~~~~~~~~~G~~~Ma~l~ 321 (324)
T TIGR00820 266 VEGVLNAASAGILIYMALVDLLAADFMH-PKMQSNLRLQIMAYIALLLGAGLMSLLA 321 (324)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 4578899999999999999999975431 111 11 112245666777888887654
No 16
>KOG1558 consensus Fe2+/Zn2+ regulated transporter [Inorganic ion transport and metabolism]
Probab=85.73 E-value=6.7 Score=37.94 Aligned_cols=83 Identities=22% Similarity=0.285 Sum_probs=49.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhccc---chhHHHHHHHH-HHHHHHHHHHHHHHHHhhCCCCchHHHHHHHHHHHhhh
Q 044590 192 LGDSILLIVALCFHSVFEGIAIGVAET---QADAWKALWTI-CLHKIFAAIAMGIALLRMIPDRPFLSCVAYAFAFAISS 267 (347)
Q Consensus 192 ~~~~~ll~~al~~Hs~~EGlalGv~~~---~~~~~~l~~aI-~lHki~eg~alg~~L~~~~~~~~~~~~~~~~~~fsl~t 267 (347)
....+-+..++++|.++||+.+|++-. .+..|....++ .-=-.|-|+++|+.+...+.+.++ .-+.....=+++.
T Consensus 201 ~~ti~~L~~al~fHk~fegf~lG~~l~~a~~~~~~~~~~~~~fslttPiGi~iG~~i~~~~~~s~~-~~i~~gvL~alAa 279 (327)
T KOG1558|consen 201 VSTIWTLFLALSFHKLFEGFGLGGCLLQAGFTFKSAVLMALFFSLTTPIGIALGIGISSSYENSPG-ALITSGVLEALAA 279 (327)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccHHHhhcccchHHHHHHHHHHHHHhHHHHHHHHHhcccccCCch-hHHHHHHHHHHhh
Confidence 345678999999999999999998621 11222222222 222578899999988876434433 2233333333333
Q ss_pred HHHHHHHHHh
Q 044590 268 PVGVAIGIII 277 (347)
Q Consensus 268 PiG~~iG~~i 277 (347)
|++|-+.+
T Consensus 280 --GtliY~~l 287 (327)
T KOG1558|consen 280 --GTLIYVAL 287 (327)
T ss_pred --hHhHHHHH
Confidence 55555444
No 17
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=81.90 E-value=6.2 Score=31.72 Aligned_cols=53 Identities=19% Similarity=0.249 Sum_probs=37.4
Q ss_pred HHHHHHHhhhHHHHHHHHHhhhcCCCCchhHHHHHHHHhhhHHHHHHHHHHhh
Q 044590 258 AYAFAFAISSPVGVAIGIIIDATTQGPVADWIFAISMGLACGVFIYVSINHLL 310 (347)
Q Consensus 258 ~~~~~fsl~tPiG~~iG~~i~~~~~~~~~~~~~~il~alAaG~flYVa~~eLl 310 (347)
.++.=|-..+-+|+.|||+++...++.....+...++|+.+|++.-+=-....
T Consensus 47 klssefIsGilVGa~iG~llD~~agTsPwglIv~lllGf~AG~lnv~Rsag~v 99 (116)
T COG5336 47 KLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLLLGFGAGVLNVLRSAGKV 99 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 33444456778899999999876655445567778999999998766544433
No 18
>PLN02159 Fe(2+) transport protein
Probab=79.62 E-value=11 Score=36.72 Aligned_cols=56 Identities=18% Similarity=0.204 Sum_probs=36.3
Q ss_pred hHHHHHHHHhhhHHHHHHHHHHhhhcccCCCCC-----CCC-cchHHHHHHHHHHHHHHHHHH
Q 044590 287 DWIFAISMGLACGVFIYVSINHLLSKGYTPQKT-----VSV-DTPNYKFLAVVLGVGVIAVVM 343 (347)
Q Consensus 287 ~~~~~il~alAaG~flYVa~~eLlp~~~~~~~~-----~~~-~~~~~~~~~~~lG~~~ma~l~ 343 (347)
.....+...+++|+|+-+++.||+|+.++.-++ ..+ +.++.. +..+.|+.++.++-
T Consensus 78 ~~~~~~~~~FagGV~Lat~flHLLp~a~e~l~~~cl~~~~~~~yP~~~-~i~~~g~~l~~liE 139 (337)
T PLN02159 78 GNIFTIVKCFASGIILGTGFMHVLPDSFEMLSSKCLEDNPWHKFPFAG-FVAMLSGLVTLAID 139 (337)
T ss_pred hhHHHHHHHHhhhHhHHHHHHHhhhHHHHhhhchhhcCCCcccCchHH-HHHHHHHHHHHHHH
Confidence 346788999999999999999999998743221 112 223333 33455666665543
No 19
>KOG2693 consensus Putative zinc transporter [Inorganic ion transport and metabolism]
Probab=74.76 E-value=0.97 Score=45.54 Aligned_cols=74 Identities=20% Similarity=0.248 Sum_probs=49.2
Q ss_pred HHHHHhhhhcccccccc--hhHHHHHhhhhhhHHHHHHHHHhcHhHHHHhccCC--CCCCcHHHHHHHHHHHHHHHHH
Q 044590 58 FVGTFVGGVSPYFLKWN--EGFLVLGTQFAGGVFLGTALMHFLSDANETFGDLT--SKEYPFAFMLACAGYLFTMLAD 131 (347)
Q Consensus 58 ~~~t~~G~~iP~~~~~~--~~~l~~~~~faaGvlLg~a~~hLLPea~e~~~~~~--~~~~p~~~~~~~~Gf~l~~lle 131 (347)
-+++++|..+.+++... +.....+.+|++|.||..++..++||-.+.-.+.. ...+-.-.+..+.||.+++++.
T Consensus 373 al~a~~G~~ig~~~~~~~~~~~~~~I~a~taG~FlYIAl~~m~Pem~~~~~~~~~~~~~~~lq~~gil~G~~~ml~ia 450 (453)
T KOG2693|consen 373 ALTAFAGLAIGLVLGAGDEEELSSWILAFTAGMFLYIALVDVLPEMLESKNSVKKRKFCFALQIFGILAGFTIMLLIA 450 (453)
T ss_pred HHHHHhhhheeEEecCCCccchHHHHHHHhcCcEEEEEehhhchhhhhccccchhHHHHHHHHHHHHHhhhHHHhhhh
Confidence 34566677777766543 66666778999999999999999999888644311 0111122345566777777654
No 20
>COG1971 Predicted membrane protein [Function unknown]
Probab=74.74 E-value=51 Score=29.30 Aligned_cols=53 Identities=17% Similarity=0.169 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHhhhcCC---CCchhHHHHHHHHhhhHHHHHHHH
Q 044590 254 LSCVAYAFAFAISSPVGVAIGIIIDATTQ---GPVADWIFAISMGLACGVFIYVSI 306 (347)
Q Consensus 254 ~~~~~~~~~fsl~tPiG~~iG~~i~~~~~---~~~~~~~~~il~alAaG~flYVa~ 306 (347)
+..+..++.|++.+-+-..+|+.+....+ +..+.|+-.+++.+-+--++|-++
T Consensus 34 ~~~L~ia~~fG~f~~i~pliG~~~g~~~s~~i~~~~~wigf~lL~~lG~~mI~e~f 89 (190)
T COG1971 34 KEALVIALIFGVFQAIMPLIGWFIGKFLSTFIAEWAHWIGFVLLIILGLKMIIEGF 89 (190)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34555556666555555555555433221 234556656665555555555554
No 21
>KOG2694 consensus Putative zinc transporter [Inorganic ion transport and metabolism]
Probab=69.95 E-value=16 Score=34.11 Aligned_cols=64 Identities=13% Similarity=0.156 Sum_probs=47.1
Q ss_pred CCCchhHHHHHHHHhhhHHHHHHHHHHhhhcccCCCCCCCC-cchHHH-HHHHHHHHHHHHHHHhh
Q 044590 282 QGPVADWIFAISMGLACGVFIYVSINHLLSKGYTPQKTVSV-DTPNYK-FLAVVLGVGVIAVVMIW 345 (347)
Q Consensus 282 ~~~~~~~~~~il~alAaG~flYVa~~eLlp~~~~~~~~~~~-~~~~~~-~~~~~lG~~~ma~l~~w 345 (347)
.++..+|-...++++|-|.++-=.+-|++||.++...+... .+.+.+ =+.++.|+.....+-+.
T Consensus 98 ~s~ag~~rL~~LLsFAiGgLLgdVFLHLLPEAwe~~n~~p~~e~sl~siGLwVlaGiLtF~~ieK~ 163 (361)
T KOG2694|consen 98 SSSAGQRRLNLLLSFAIGGLLGDVFLHLLPEAWESNNQDPSSENSLSSIGLWVLAGILTFSLIEKL 163 (361)
T ss_pred cCchhHHHHHHHHHHHHhhHHHHHHHHhCHHHHhccCCCCCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence 45567888999999999999999999999999876532211 123333 36788888888777653
No 22
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=68.84 E-value=17 Score=28.85 Aligned_cols=40 Identities=28% Similarity=0.442 Sum_probs=27.5
Q ss_pred HHhhhHHHHHHHHHhhhcCCCCchhHHHHHHHHhhhHHHH
Q 044590 263 FAISSPVGVAIGIIIDATTQGPVADWIFAISMGLACGVFI 302 (347)
Q Consensus 263 fsl~tPiG~~iG~~i~~~~~~~~~~~~~~il~alAaG~fl 302 (347)
..+.+-+|+++|.-++..+.+...-.+..++.|+++|.+-
T Consensus 52 ~v~pil~G~~lG~WLD~~~~t~~~~tl~~lllGv~~G~~n 91 (100)
T TIGR02230 52 VAIPTLLGVAVGIWLDRHYPSPFSWTLTMLIVGVVIGCLN 91 (100)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHHH
Confidence 3456667888888888776544444456677888888764
No 23
>TIGR02840 spore_YtaF putative sporulation protein YtaF. This protein family was identified, at the time of the publication of the Carboxydothermus hydrogenoformans genome, as having a phylogenetic profile that exactly matches the subset of the Firmicutes capable of forming endospores. The species include Bacillus anthracis, Clostridium tetani, Thermoanaerobacter tengcongensis, Geobacillus kaustophilus, etc. This protein, previously named YtaF, is therefore a putative sporulation protein.
Probab=66.82 E-value=65 Score=28.89 Aligned_cols=52 Identities=19% Similarity=0.166 Sum_probs=28.6
Q ss_pred chHHHHHHHHHHHhhhHHHHHHHHHhhhcCCCCchhHHHHHHHHhhhHHHHH
Q 044590 252 PFLSCVAYAFAFAISSPVGVAIGIIIDATTQGPVADWIFAISMGLACGVFIY 303 (347)
Q Consensus 252 ~~~~~~~~~~~fsl~tPiG~~iG~~i~~~~~~~~~~~~~~il~alAaG~flY 303 (347)
+++..+..+++..+++-+|..+|..+........+.|+-++++.+-++-++|
T Consensus 29 ~~~~~l~ig~~~~~~~~lg~~~G~~~~~~i~~~~~~~ig~~iLi~iG~~mi~ 80 (206)
T TIGR02840 29 PFLSNLIIAVISGLFIFISMLLGKFLAKFLPPKVTEILGAFILIAIGIWIIY 80 (206)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHH
Confidence 3455666677777888888888887764322112344433333333333333
No 24
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=59.18 E-value=31 Score=24.39 Aligned_cols=52 Identities=17% Similarity=0.296 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHhhhcCCCCchhHHHHHHHHhhhHHHHHHHHHHhhhcc
Q 044590 254 LSCVAYAFAFAISSPVGVAIGIIIDATTQGPVADWIFAISMGLACGVFIYVSINHLLSKG 313 (347)
Q Consensus 254 ~~~~~~~~~fsl~tPiG~~iG~~i~~~~~~~~~~~~~~il~alAaG~flYVa~~eLlp~~ 313 (347)
..++.|++++ |-.+|+...+..+. +.+...+...++..|.++++.. +++|++
T Consensus 4 ivt~fWs~il------~~vvgyI~ssL~~~-~~n~~~~~Ii~vi~~i~~~~~~-~~i~~~ 55 (57)
T PF11151_consen 4 IVTFFWSFIL------GEVVGYIGSSLTGV-TYNFTTAAIIAVIFGIIVANII-AVIPKK 55 (57)
T ss_pred EehhHHHHHH------HHHHHHHHHHHhCC-CCChHHHHHHHHHHHHHHHHHH-HHcCCC
Confidence 3456777665 56666666544333 4567788888999999888865 577753
No 25
>PRK13755 putative mercury transport protein MerC; Provisional
Probab=55.87 E-value=1e+02 Score=25.50 Aligned_cols=17 Identities=29% Similarity=0.651 Sum_probs=14.3
Q ss_pred HHHHHHHHHHHHHHhhc
Q 044590 330 LAVVLGVGVIAVVMIWD 346 (347)
Q Consensus 330 ~~~~lG~~~ma~l~~w~ 346 (347)
..+-.|.++|..+.|||
T Consensus 103 ~l~Y~gLalMv~vsiWD 119 (139)
T PRK13755 103 NLLYVGLALMVGVSIWD 119 (139)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 34567999999999998
No 26
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=52.56 E-value=49 Score=22.77 Aligned_cols=39 Identities=21% Similarity=0.279 Sum_probs=25.8
Q ss_pred HHhhhHHHHHHHHHhhhcCCCCchhHHHHHHHHhhhHHH
Q 044590 263 FAISSPVGVAIGIIIDATTQGPVADWIFAISMGLACGVF 301 (347)
Q Consensus 263 fsl~tPiG~~iG~~i~~~~~~~~~~~~~~il~alAaG~f 301 (347)
+..+.-+|..+|+.++...+....-.+.+++.|+++|..
T Consensus 10 ~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~llG~~~g~~ 48 (55)
T PF09527_consen 10 MAAPILVGFFLGYWLDKWFGTSPWFTLIGLLLGIAAGFY 48 (55)
T ss_pred HHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHH
Confidence 344555788889999876654333445677777777754
No 27
>TIGR02896 spore_III_AF stage III sporulation protein AF. This family represents the stage III sporulation protein AF of the bacterial endospore formation program, which exists in some but not all members of the Firmicutes (formerly called low-GC Gram-positives). The C-terminal region of this protein is poorly conserved, so only the N-terminal region, which includes two predicted transmembrane domains, is included in the seed alignment.
Probab=44.20 E-value=86 Score=25.15 Aligned_cols=38 Identities=16% Similarity=0.377 Sum_probs=25.8
Q ss_pred HhhhHHHHHHHHHHhhhcccCCCCCCCCcchHHHHHHHHHHHHHHHHHH
Q 044590 295 GLACGVFIYVSINHLLSKGYTPQKTVSVDTPNYKFLAVVLGVGVIAVVM 343 (347)
Q Consensus 295 alAaG~flYVa~~eLlp~~~~~~~~~~~~~~~~~~~~~~lG~~~ma~l~ 343 (347)
-++.-.++-..+..++|. +++.|++-+++|+.+|.++.
T Consensus 9 ~i~~~~il~t~~~~llP~-----------~~~kkYvr~v~Gl~Li~~il 46 (106)
T TIGR02896 9 NIIVLILLATILEMLLPN-----------SSLKKYVKFVVGLILMVVIL 46 (106)
T ss_pred HHHHHHHHHHHHHHHCCC-----------ccHHHHHHHHHHHHHHHHHH
Confidence 344555555555556663 47778888999999888764
No 28
>PF14143 YrhC: YrhC-like protein
Probab=37.51 E-value=68 Score=23.90 Aligned_cols=17 Identities=29% Similarity=0.636 Sum_probs=11.8
Q ss_pred HhhhHHHHHHHHHHhhhcc
Q 044590 295 GLACGVFIYVSINHLLSKG 313 (347)
Q Consensus 295 alAaG~flYVa~~eLlp~~ 313 (347)
-+|-++|+|++. ++|.+
T Consensus 17 LLAvs~FlYiG~--viP~~ 33 (72)
T PF14143_consen 17 LLAVSTFLYIGT--VIPIG 33 (72)
T ss_pred HHHHHHHHHHHh--hCCcc
Confidence 366778888887 67743
No 29
>TIGR00145 FTR1 family protein. A characterized member from yeast acts as oxidase-coupled high affinity iron transporter. Note that the apparent member from E. coli K12-MG1655 has a frameshift by homology with member sequences from other species.
Probab=36.25 E-value=3.8e+02 Score=25.36 Aligned_cols=81 Identities=14% Similarity=0.109 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHHHHHHHH----hhCCCCchHHHHHHHHHHHhhhHH--HHHHHHHhhhcCCCCchhHHHHHHHHhhhH
Q 044590 226 LWTICLHKIFAAIAMGIALL----RMIPDRPFLSCVAYAFAFAISSPV--GVAIGIIIDATTQGPVADWIFAISMGLACG 299 (347)
Q Consensus 226 ~~aI~lHki~eg~alg~~L~----~~~~~~~~~~~~~~~~~fsl~tPi--G~~iG~~i~~~~~~~~~~~~~~il~alAaG 299 (347)
.+-|.+-|..|+.-+-..+. |.+ +++.++.+....+-++...+ |.++-.......++...+...++..-+|+.
T Consensus 7 ~~~I~lREgLEA~LIV~illa~L~k~~-~~~~~~~V~~G~~~gl~~s~~~a~~~~~~~~~~~~~~~~el~eg~~~lvAv~ 85 (283)
T TIGR00145 7 VFLITLREGLEAALVVSVLLSYLKRAQ-RTRLRGWVWVGVLAGFAACLAIGIGVIGAYGSLQKDEFKELLEGIFGVIAVV 85 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcC-ccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHH
Confidence 45588899999986433322 322 23333333333333333332 222222222111111256789999999999
Q ss_pred HHHHHHHH
Q 044590 300 VFIYVSIN 307 (347)
Q Consensus 300 ~flYVa~~ 307 (347)
.+.|+++-
T Consensus 86 ~l~~m~~W 93 (283)
T TIGR00145 86 MLSYMGLW 93 (283)
T ss_pred HHHHHHHH
Confidence 99999974
No 30
>PRK14740 kdbF potassium-transporting ATPase subunit F; Provisional
Probab=34.87 E-value=74 Score=19.23 Aligned_cols=20 Identities=30% Similarity=0.585 Sum_probs=16.5
Q ss_pred HHHHHHHHhhhHHHHHHHHH
Q 044590 288 WIFAISMGLACGVFIYVSIN 307 (347)
Q Consensus 288 ~~~~il~alAaG~flYVa~~ 307 (347)
|+..+..+.++|.|+|....
T Consensus 3 ~~~wls~a~a~~Lf~YLv~A 22 (29)
T PRK14740 3 VLDWLSLALATGLFVYLLVA 22 (29)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 56677888999999999774
No 31
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=33.89 E-value=3.4e+02 Score=24.08 Aligned_cols=30 Identities=17% Similarity=0.297 Sum_probs=15.0
Q ss_pred HHHHHhhhcccCCCCCCCCcchHHHHHHHHHHHHHHHH
Q 044590 304 VSINHLLSKGYTPQKTVSVDTPNYKFLAVVLGVGVIAV 341 (347)
Q Consensus 304 Va~~eLlp~~~~~~~~~~~~~~~~~~~~~~lG~~~ma~ 341 (347)
+....++|..+.+ ++-.+..+++|++...+
T Consensus 164 ~~~~~~lp~~inp--------~l~~~~~iiig~i~~~~ 193 (206)
T PF06570_consen 164 FVLTSFLPPVINP--------VLPPWVYIIIGVIAFAL 193 (206)
T ss_pred HHHHHHccccCCc--------CCCHHHHHHHHHHHHHH
Confidence 3345667765543 22234555666555443
No 32
>PF03823 Neurokinin_B: Neurokinin B; InterPro: IPR003635 Tachykinins [, , ] are a group of biologically active peptides which excite neurons, evoke behavioral responses, are potent vasodilatators and contract (directly or indirectly) many smooth muscles. This family includes neurokinins, as well as many other peptides. Like other tachykinins, neurokinins are synthesized as larger protein precursors that are enzymatically converted to their mature forms.; GO: 0007217 tachykinin receptor signaling pathway
Probab=33.08 E-value=85 Score=22.12 Aligned_cols=22 Identities=32% Similarity=0.211 Sum_probs=13.3
Q ss_pred ChhHHHHHHHHHHHHHHHhhccC
Q 044590 1 MSRFLLALAIFLSLILLTTAHSG 23 (347)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~ 23 (347)
|.+++||..++. +-.+...|+-
T Consensus 1 MR~~lLf~aiLa-lsla~s~gav 22 (59)
T PF03823_consen 1 MRSTLLFAAILA-LSLARSFGAV 22 (59)
T ss_pred ChhHHHHHHHHH-HHHHHHhhhh
Confidence 457788877776 4444444443
No 33
>PF04647 AgrB: Accessory gene regulator B; InterPro: IPR006741 The accessory gene regulator (agr) of Staphylococcus aureus is the central regulatory system that controls the gene expression for a large set of virulence factors. The arg locus consists of two transcripts: RNAII and RNAIII. RNAII encodes four genes (agrA, B, C, and D) whose gene products assemble a quorum sensing system. At low cell density, the agr genes are continuously expressed at basal levels. A signal molecule, autoinducing peptide (AIP), produced and secreted by the bacteria, accumulates outside of the cells. When the cell density increases and the AIP concentration reaches a threshold, it activates the agr response, i.e. activation of secreted protein gene expression and subsequent repression of cell wall-associated protein genes. AgrB and AgrD are essential for the production of the autoinducing peptide which functions as a signal for quorum sensing. AgrB is a transmembrane protein [] involved in the proteolytic processing of AgrD, and may have both proteolytic and transporter activities, facilitating the export of the processed AgrD peptide []. ; GO: 0016020 membrane
Probab=32.20 E-value=3.3e+02 Score=23.42 Aligned_cols=20 Identities=10% Similarity=-0.076 Sum_probs=15.2
Q ss_pred hHHHHHHHHHHHHHHHHHHH
Q 044590 221 DAWKALWTICLHKIFAAIAM 240 (347)
Q Consensus 221 ~~~~l~~aI~lHki~eg~al 240 (347)
....+.+++.+|+++|.+..
T Consensus 38 ~~~~l~i~~~~g~~~~~li~ 57 (185)
T PF04647_consen 38 IIIILLIGLLLGMFPETLIF 57 (185)
T ss_pred HHHHHHHHHHHhhHHHHHHH
Confidence 34567788899999998763
No 34
>TIGR02840 spore_YtaF putative sporulation protein YtaF. This protein family was identified, at the time of the publication of the Carboxydothermus hydrogenoformans genome, as having a phylogenetic profile that exactly matches the subset of the Firmicutes capable of forming endospores. The species include Bacillus anthracis, Clostridium tetani, Thermoanaerobacter tengcongensis, Geobacillus kaustophilus, etc. This protein, previously named YtaF, is therefore a putative sporulation protein.
Probab=29.26 E-value=4.2e+02 Score=23.68 Aligned_cols=47 Identities=15% Similarity=0.174 Sum_probs=22.0
Q ss_pred HHHHHHHHHhhhHHHHHHHHHhhhcCCCCchhHHHH-HHHHhhhHHHHHHHH
Q 044590 256 CVAYAFAFAISSPVGVAIGIIIDATTQGPVADWIFA-ISMGLACGVFIYVSI 306 (347)
Q Consensus 256 ~~~~~~~fsl~tPiG~~iG~~i~~~~~~~~~~~~~~-il~alAaG~flYVa~ 306 (347)
.+..++.+++.+.+-..+|+.+.... ..++.. +..-++++.+++++.
T Consensus 29 ~~~~~l~ig~~~~~~~~lg~~~G~~~----~~~i~~~~~~~ig~~iLi~iG~ 76 (206)
T TIGR02840 29 PFLSNLIIAVISGLFIFISMLLGKFL----AKFLPPKVTEILGAFILIAIGI 76 (206)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHH----HHHhchhhHHHHHHHHHHHHHH
Confidence 34555555555555555555554321 122222 333445555555554
No 35
>PF02659 DUF204: Domain of unknown function DUF; InterPro: IPR003810 Uncharacterised domain in proteins of unknown function.
Probab=28.44 E-value=2.2e+02 Score=20.20 Aligned_cols=21 Identities=14% Similarity=0.161 Sum_probs=9.9
Q ss_pred HHHHHHHhhhHHHHHHHHHhh
Q 044590 258 AYAFAFAISSPVGVAIGIIID 278 (347)
Q Consensus 258 ~~~~~fsl~tPiG~~iG~~i~ 278 (347)
...+.-.+++-+|..+|..+.
T Consensus 28 ~ig~~~~~~~~~G~~~G~~~~ 48 (67)
T PF02659_consen 28 IIGIFQFIMPLLGLLLGRRLG 48 (67)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 333333444555555555543
No 36
>PF04210 MtrG: Tetrahydromethanopterin S-methyltransferase, subunit G ; InterPro: IPR005866 This model describes the N5-methyltetrahydromethanopterin: coenzyme M methyltransferase subunit G in methanogenic archaea. This methyltranferase is a membrane-associated enzyme complex that uses methyl-transfer reaction to drive a sodium-ion pump. Archaea have evolved energy-yielding pathways marked by one-carbon biochemistry featuring novel cofactors and enzymes. This transferase is involved in the transfer of a methyl group from N5-methyltetrahydromethanopterin to coenzyme M. In an accompanying reaction, methane is produced by two-electron reduction of the methyl moiety in methyl-coenzyme M by another enzyme methyl-coenzyme M reductase.; GO: 0030269 tetrahydromethanopterin S-methyltransferase activity, 0015948 methanogenesis, 0016021 integral to membrane
Probab=26.45 E-value=88 Score=23.08 Aligned_cols=21 Identities=29% Similarity=0.461 Sum_probs=16.7
Q ss_pred HHHHHHhhhHHHHHHHHHHhh
Q 044590 290 FAISMGLACGVFIYVSINHLL 310 (347)
Q Consensus 290 ~~il~alAaG~flYVa~~eLl 310 (347)
.||+.|+..|.++|+.+.-+.
T Consensus 47 iGIlYG~v~Glii~~~~~~l~ 67 (70)
T PF04210_consen 47 IGILYGLVIGLIIFIIYIVLS 67 (70)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 588888999999988876544
No 37
>COG3965 Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]
Probab=24.76 E-value=6e+02 Score=24.03 Aligned_cols=50 Identities=16% Similarity=0.184 Sum_probs=36.6
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHhhhcCCCCchhHHHHHHHHhhhHHHHHH
Q 044590 255 SCVAYAFAFAISSPVGVAIGIIIDATTQGPVADWIFAISMGLACGVFIYV 304 (347)
Q Consensus 255 ~~~~~~~~fsl~tPiG~~iG~~i~~~~~~~~~~~~~~il~alAaG~flYV 304 (347)
|.|.|....|..--+|-++|+.+..+..---...+-+..+++.|+.|+=+
T Consensus 162 kqW~Mst~lS~al~VaF~~a~~l~~T~~a~l~~Y~DPmvlaL~~~v~Ipl 211 (314)
T COG3965 162 KQWLMSTCLSAALFVAFAAAWLLAGTKFAHLVVYADPMVLALVCLVFIPL 211 (314)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCchhhhhcccCHHHHHHHHHheeec
Confidence 56888888999999999999999765432222334567788889888654
No 38
>PF13829 DUF4191: Domain of unknown function (DUF4191)
Probab=24.55 E-value=5.5e+02 Score=23.50 Aligned_cols=43 Identities=21% Similarity=0.325 Sum_probs=26.9
Q ss_pred HHHHHHHHHhhhHHHHHHHHHhhhcCCCCchhHHHHHHHHhhhHHHHHHHH
Q 044590 256 CVAYAFAFAISSPVGVAIGIIIDATTQGPVADWIFAISMGLACGVFIYVSI 306 (347)
Q Consensus 256 ~~~~~~~fsl~tPiG~~iG~~i~~~~~~~~~~~~~~il~alAaG~flYVa~ 306 (347)
.+++..+|....-+++++|+++. .|++-++.|+..|.++.+-+
T Consensus 28 ~~~ml~a~l~~~~v~v~ig~l~~--------~~~~~~i~gi~~g~l~am~v 70 (224)
T PF13829_consen 28 PWLMLGAFLGPIAVFVLIGLLFG--------SWWYWLIIGILLGLLAAMIV 70 (224)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHc--------cHHHHHHHHHHHHHHHHHHH
Confidence 45555666667777777777764 34555666666666655543
No 39
>PRK01026 tetrahydromethanopterin S-methyltransferase subunit G; Provisional
Probab=23.60 E-value=1e+02 Score=23.19 Aligned_cols=22 Identities=27% Similarity=0.357 Sum_probs=16.7
Q ss_pred HHHHHHhhhHHHHHHHHHHhhh
Q 044590 290 FAISMGLACGVFIYVSINHLLS 311 (347)
Q Consensus 290 ~~il~alAaG~flYVa~~eLlp 311 (347)
.||+.|+..|+++++....+.+
T Consensus 50 iGIlYG~viGlli~~i~~~~~~ 71 (77)
T PRK01026 50 IGILYGLVIGLLIVLVYIILSP 71 (77)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 5788888888888887766654
No 40
>TIGR01149 mtrG N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit G. coenzyme M methyltransferase subunit G in methanogenic archaea. This methyltranfersae is membrane-associated enzyme complex that uses methyl-transfer reaction to drive sodium-ion pump. Archaea have evolved energy-yielding pathways marked by one-carbon biochemistry featuring novel cofactors and enzymes. This transferase is involved in the transfer of 'methyl' group from N5-methyltetrahydromethanopterin to coenzyme M. In an accompanying reaction, methane is produced by two-electron reduction of the methyl moiety in methyl-coenzyme M by another enzyme methyl-coenzyme M reductase.
Probab=23.47 E-value=1.1e+02 Score=22.60 Aligned_cols=22 Identities=27% Similarity=0.437 Sum_probs=16.8
Q ss_pred HHHHHHhhhHHHHHHHHHHhhh
Q 044590 290 FAISMGLACGVFIYVSINHLLS 311 (347)
Q Consensus 290 ~~il~alAaG~flYVa~~eLlp 311 (347)
.||+.|+..|.++|+.+.-+.+
T Consensus 47 iGIlYG~viGlli~~~~~~l~~ 68 (70)
T TIGR01149 47 IGILYGLVIGLILFLIYILLSS 68 (70)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 5788888888888887766554
No 41
>PF13124 DUF3963: Protein of unknown function (DUF3963)
Probab=23.31 E-value=1.6e+02 Score=18.75 Aligned_cols=22 Identities=14% Similarity=0.388 Sum_probs=17.7
Q ss_pred chHHHHHHHHHHHHHHHHHHhh
Q 044590 324 TPNYKFLAVVLGVGVIAVVMIW 345 (347)
Q Consensus 324 ~~~~~~~~~~lG~~~ma~l~~w 345 (347)
+++.+-+.+++...+..+++.|
T Consensus 17 qkwirnit~cfal~vv~lvslw 38 (40)
T PF13124_consen 17 QKWIRNITFCFALLVVVLVSLW 38 (40)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3566667888888999999988
No 42
>PRK03557 zinc transporter ZitB; Provisional
Probab=22.22 E-value=6.8e+02 Score=23.72 Aligned_cols=31 Identities=19% Similarity=0.170 Sum_probs=19.4
Q ss_pred HHHHhhhhhhHHHHHHHHHhcHhHHHHhccC
Q 044590 78 LVLGTQFAGGVFLGTALMHFLSDANETFGDL 108 (347)
Q Consensus 78 l~~~~~faaGvlLg~a~~hLLPea~e~~~~~ 108 (347)
.-.+.++..|+++...-+-++-|+++.+.+.
T Consensus 86 ~E~l~al~~~~~l~~~~~~i~~eai~~l~~~ 116 (312)
T PRK03557 86 LTTLAAFVNAIALVVITILIVWEAIERFRTP 116 (312)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 3344556666666555677777888876543
No 43
>KOG4812 consensus Golgi-associated protein/Nedd4 WW domain-binding protein [General function prediction only]
Probab=21.33 E-value=2e+02 Score=26.59 Aligned_cols=77 Identities=16% Similarity=0.295 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHHHhhhhcccccccchhHHHHHhhhhhhHHHHHHHHHhcHhHHHHhccCCCCCCcHHHHHHHHHHHHHH
Q 044590 49 VKIWCLMIIFVGTFVGGVSPYFLKWNEGFLVLGTQFAGGVFLGTALMHFLSDANETFGDLTSKEYPFAFMLACAGYLFTM 128 (347)
Q Consensus 49 ~ki~~l~~i~~~t~~G~~iP~~~~~~~~~l~~~~~faaGvlLg~a~~hLLPea~e~~~~~~~~~~p~~~~~~~~Gf~l~~ 128 (347)
.-+|+.++.|+.-++|-++-+++.... .=.++..++-|.=| .=.-|+++-...+.+..+..|-+.++++.+|+++++
T Consensus 162 ~F~~af~vAflFnwIGFlltycl~tT~-agRYGA~~GfGLsL--ikwilIv~~sd~f~~y~n~q~wLwwi~~vlG~ll~l 238 (262)
T KOG4812|consen 162 IFMWAFIVAFLFNWIGFLLTYCLTTTH-AGRYGAISGFGLSL--IKWILIVRFSDDFESYFNGQYWLWWIFLVLGLLLFL 238 (262)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhH-hhhhhhhhccchhh--heeeEEeecccccccccccchHHHHHHHHHHHHHHH
Confidence 356777888888888888887764210 00011112222211 115566664444443333345566777888998876
No 44
>KOG2474 consensus Zinc transporter and related ZIP domain-containing proteins [Inorganic ion transport and metabolism]
Probab=20.88 E-value=85 Score=31.04 Aligned_cols=56 Identities=18% Similarity=0.303 Sum_probs=34.5
Q ss_pred hHHHHHHHHHHHhhhHHHHHHHHHhhhcCCCCchhHHHHHHHHhhhHHHHHHHHHHhhhcc
Q 044590 253 FLSCVAYAFAFAISSPVGVAIGIIIDATTQGPVADWIFAISMGLACGVFIYVSINHLLSKG 313 (347)
Q Consensus 253 ~~~~~~~~~~fsl~tPiG~~iG~~i~~~~~~~~~~~~~~il~alAaG~flYVa~~eLlp~~ 313 (347)
..++.+..+.-...|-.|. ++.+....+ .+.+.++.+|+|+|+++|.++.-++.+.
T Consensus 45 v~~all~tl~~~~~tslga--~~vv~~~~~---~~~~l~~~lGfAaGvmLaaSf~S~l~~s 100 (406)
T KOG2474|consen 45 VRQALLGTLLLGGLTSLGA--AYVVLVEAN---SRKVLDISLGFAAGVMLAASFWSLLAHS 100 (406)
T ss_pred HHHHHHHHHHHHHHHhccc--ceEEEEecC---chhhhhhhhchhhhHHHHHHHHHhhccc
Confidence 3345555555555555544 333322222 2356799999999999999998666553
No 45
>KOG3850 consensus Predicted membrane protein [Function unknown]
Probab=20.01 E-value=2e+02 Score=28.52 Aligned_cols=46 Identities=24% Similarity=0.349 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHHHHhhhhcccccccchhHHHHHhhhhhhHHHHHHHHHh
Q 044590 47 ILVKIWCLMIIFVGTFVGGVSPYFLKWNEGFLVLGTQFAGGVFLGTALMHF 97 (347)
Q Consensus 47 ~~~ki~~l~~i~~~t~~G~~iP~~~~~~~~~l~~~~~faaGvlLg~a~~hL 97 (347)
+.+-+..++.+|++|+.-+..|+...++.....++. |+|++.|.|=
T Consensus 395 iiLalm~VlLvfVSTIa~~v~PLmkSR~rt~~t~~L-----V~l~~~~wkh 440 (455)
T KOG3850|consen 395 IILALMTVLLVFVSTIANCVSPLMKSRNRTASTFFL-----VFLLAFFWKH 440 (455)
T ss_pred HHHHHHHHHHHHHHHHHhhccHHhhhhhHHHHHHHH-----HHHHHHHHHH
Confidence 445566777888999999999988776665544433 5555555443
Done!