BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044591
(241 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5M755|PAP7_ARATH Probable plastid-lipid-associated protein 7, chloroplastic
OS=Arabidopsis thaliana GN=PAP7 PE=2 SV=1
Length = 273
Score = 282 bits (721), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 140/242 (57%), Positives = 185/242 (76%), Gaps = 11/242 (4%)
Query: 1 LIPATHSWTKSTSF-------RSIYTAKVAEQSSGLIGDDRETRDSSDKR----TLTQIK 49
L+ T S K+ SF R ++ KV EQSS ++++ + ++ T++ IK
Sbjct: 28 LVSFTSSNGKTLSFSDNSFRLRPMFIGKVTEQSSCSSPNEQQQDEEQEQEQEEITVSHIK 87
Query: 50 TELLQVVQGINRGIFGVPSAKKSEIEALVELLESQNPTPHPTANLDKVGGTWKLVYSTIT 109
EL + ++GINRGIFGV S KK+EIE LV+LLE +NPTP PT LDK+GG WKL+YSTIT
Sbjct: 88 EELYEALKGINRGIFGVKSDKKTEIEGLVKLLECRNPTPEPTGELDKIGGCWKLIYSTIT 147
Query: 110 ILGSKRTKLGLRDFITLGDFFQSIDVAKGKAVNVIKFNVRGLNLLNGQLTIEASFKIASK 169
+LGSKRTKLGLRDF++LGD Q ID+A+GK V+V+KF+VRGLNLL+G+ I ASFKI+SK
Sbjct: 148 VLGSKRTKLGLRDFVSLGDLLQQIDIAQGKTVHVLKFDVRGLNLLDGEFRIVASFKISSK 207
Query: 170 SRVDIAYDNSTITPEQLMNMFRKNYDLLLGIFNPDGWLEISYVDDTMRIGRDDKGNIFIL 229
S V+I Y++STI P+QLMN+FRKN DLLLGIFNP+G EISY+D+ +++GRD KGN+F+L
Sbjct: 208 SSVEITYESSTIKPDQLMNIFRKNMDLLLGIFNPEGLFEISYLDEDLQVGRDGKGNVFVL 267
Query: 230 ER 231
ER
Sbjct: 268 ER 269
>sp|Q6K439|PAP2_ORYSJ Probable plastid-lipid-associated protein 2, chloroplastic OS=Oryza
sativa subsp. japonica GN=PAP2 PE=2 SV=1
Length = 319
Score = 81.6 bits (200), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 100/228 (43%), Gaps = 42/228 (18%)
Query: 45 LTQIKTELLQVVQGINRGIFGVPSAKKSEIEALVELLESQNPTPHPTANLDKVGGTWKLV 104
+ ++K +L + + G RG+ S ++E+ L+ LE++NPTP PT L + G W L
Sbjct: 92 VAELKAKLKEALYGTERGLRAS-SETRAEVVELITQLEARNPTPAPTEALTLLNGKWILA 150
Query: 105 YSTITILGSKRTKLGLRDFITLGDFFQSIDVAKGKAVNVIKFNVRGLNLLNGQLTIEASF 164
Y++ + L L + + + Q+ID N IKF+ L ++ A F
Sbjct: 151 YTSFSQLFPLLGSGSLPQLVKVEEISQTIDSENFTVQNCIKFSG---PLATTSVSTNAKF 207
Query: 165 KIASKSRVDIAYDNSTITPEQLMN---------MFRKNYDL--LLGIF------------ 201
++ S RV I +D I QL + +F +N DL L GIF
Sbjct: 208 EVRSPKRVQIKFDEGIIGTPQLTDSIVLPEKFELFGQNIDLTPLKGIFSSIENAASSVAR 267
Query: 202 ---------------NPDGWLEISYVDDTMRIGRDDKGNIFILERSSS 234
N + WL +Y+DD +RI R D +IF+L + S
Sbjct: 268 TISGQPPLKIPIRTDNAESWLLTTYLDDELRISRGDGSSIFVLFKEGS 315
>sp|Q9LU85|PAP4_ARATH Probable plastid-lipid-associated protein 4, chloroplastic
OS=Arabidopsis thaliana GN=PAP4 PE=1 SV=1
Length = 242
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 94/190 (49%), Gaps = 36/190 (18%)
Query: 47 QIKTELLQVVQGINRGIFGVPSAKKSEIEALVELLESQNPTPHPTANLDKVGGTWKLVYS 106
Q+K ELL+ ++ + RG P + I+ L +E+ NPT P + D V G W+L+Y+
Sbjct: 73 QLKQELLEAIEPLERGATASPD-DQLRIDQLARKVEAVNPTKEPLKS-DLVNGKWELIYT 130
Query: 107 T-ITILGSKRTKLGLRDFITLGDFFQSIDVAKGKAVNVIKFNVRGLNLLNGQLTIEASFK 165
T +IL +K+ + LR +QSI+V K N+ + N + G + S K
Sbjct: 131 TSASILQAKKPRF-LRSITN----YQSINVDTLKVQNMETWPF--YNSVTGDIKPLNSKK 183
Query: 166 IASKSRVDIAYDNSTITPEQLMNMFRKNYDLL--LGIFNPD---GWLEISYVDDTMRIGR 220
+A K +V + +L + I PD G LEI+YVD+ +R+ R
Sbjct: 184 VAVKLQV---------------------FKILGFIPIKAPDSARGELEITYVDEELRLSR 222
Query: 221 DDKGNIFILE 230
DKGN+FIL+
Sbjct: 223 GDKGNLFILK 232
>sp|P80471|LIPC_SOLTU Light-induced protein, chloroplastic OS=Solanum tuberosum PE=1 SV=2
Length = 326
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 94/226 (41%), Gaps = 43/226 (19%)
Query: 48 IKTELLQVVQGINRGIFGVPSAKKSEIEALVELLESQNPTPHPTANLDKVGGTWKLVYST 107
+K +L + G NRG+ S ++EI L+ LES+NP P PT L + G W L Y++
Sbjct: 102 LKKQLADSLYGTNRGL-SASSETRAEIVELITQLESKNPNPAPTEALTLLNGKWILAYTS 160
Query: 108 ITILGSKRTKLGLRDFITLGDFFQSIDVAKGKAVNVIKFNVRGLNLLNGQLTIEASFKIA 167
+ L ++ G + + + Q+ID N + F L ++ A F++
Sbjct: 161 FSGLFPLLSR-GNLPLVRVEEISQTIDSESFTVQNSVVF---AGPLATTSISTNAKFEVR 216
Query: 168 SKSRVDIAYDNSTITPEQLMN--MFRKNYDLL-----LGIF------------------- 201
S RV I ++ I QL + + +N + L L F
Sbjct: 217 SPKRVQIKFEEGIIGTPQLTDSIVLPENVEFLGQKIDLSPFKGLITSVQDTASSVAKSIS 276
Query: 202 ------------NPDGWLEISYVDDTMRIGRDDKGNIFILERSSSA 235
N WL +Y+DD +RI R D G++F+L + S
Sbjct: 277 SQPPIKFPITNNNAQSWLLTTYLDDELRISRGDAGSVFVLIKEGSP 322
>sp|O99019|LIPC_SOLDE Light-induced protein, chloroplastic OS=Solanum demissum PE=1 SV=1
Length = 326
Score = 64.7 bits (156), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 94/226 (41%), Gaps = 43/226 (19%)
Query: 48 IKTELLQVVQGINRGIFGVPSAKKSEIEALVELLESQNPTPHPTANLDKVGGTWKLVYST 107
+K +L + G NRG+ S ++EI L+ LES+NP P PT L + G W L Y++
Sbjct: 102 LKKQLADSLYGTNRGL-SASSETRAEIVELITQLESKNPNPAPTEALTLLNGKWILAYTS 160
Query: 108 ITILGSKRTKLGLRDFITLGDFFQSIDVAKGKAVNVIKFNVRGLNLLNGQLTIEASFKIA 167
+ L ++ G + + + Q+ID N + F L ++ A F++
Sbjct: 161 FSGLFPLLSR-GNLPLVRVEEISQTIDSESFTVQNSVVF---AGPLATTSISTNAKFEVR 216
Query: 168 SKSRVDIAYDNSTITPEQLMN--MFRKNYDLL-----LGIF------------------- 201
S RV I ++ I QL + + +N + L + F
Sbjct: 217 SPKRVQIKFEEGIIGTPQLTDSIVLPENVEFLGQKIDVSPFKGLITSVQDTASSVVKSIS 276
Query: 202 ------------NPDGWLEISYVDDTMRIGRDDKGNIFILERSSSA 235
N WL +Y+DD +RI R D G++F+L + S
Sbjct: 277 SQPPIKFPITNNNAQSWLLTTYLDDELRIPRGDAGSVFVLIKEGSP 322
>sp|O49629|PAP2_ARATH Probable plastid-lipid-associated protein 2, chloroplastic
OS=Arabidopsis thaliana GN=PAP2 PE=1 SV=1
Length = 310
Score = 64.3 bits (155), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 94/226 (41%), Gaps = 43/226 (19%)
Query: 47 QIKTELLQVVQGINRGIFGVPSAKKSEIEALVELLESQNPTPHPTANLDKVGGTWKLVYS 106
++K L+ + G +RG+ S ++EI L+ LES+NPTP PT L + G W L Y+
Sbjct: 85 RLKRSLVDSLYGTDRGL-SASSETRAEIGDLITQLESKNPTPAPTEALFLLNGKWILAYT 143
Query: 107 TITILGSKRTKLGLRDFITLGDFFQSIDVAKGKAVNVIKFNVRGLNLLNGQLTIEASFKI 166
+ L ++ G+ I + + Q+ID N ++F L ++ A F+I
Sbjct: 144 SFVNLFPLLSR-GIVPLIKVDEISQTIDSDNFTVQNSVRF---AGPLGTNSISTNAKFEI 199
Query: 167 ASKSRVDIAYDNSTITPEQLMNMFR-KNYDLLLGI---FNP------------------- 203
S RV I ++ I QL + Y +LG NP
Sbjct: 200 RSPKRVQIKFEQGVIGTPQLTDSIEIPEYVEVLGQKIDLNPIRGLLTSVQDTASSVARTI 259
Query: 204 ---------------DGWLEISYVDDTMRIGRDDKGNIFILERSSS 234
WL +Y+D +RI R D G++F+L + S
Sbjct: 260 SSQPPLKFSLPADNAQSWLLTTYLDKDIRISRGDGGSVFVLIKEGS 305
>sp|Q96398|CHRC_CUCSA Chromoplast-specific carotenoid-associated protein, chromoplast
OS=Cucumis sativus GN=CHRC PE=1 SV=1
Length = 322
Score = 62.0 bits (149), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 98/228 (42%), Gaps = 46/228 (20%)
Query: 47 QIKTELLQVVQGINRGIFGVPSAKKSEIEALVELLESQNPTPHPTANLDKVGGTWKLVYS 106
++K L+ G +RG+ V ++EI L+ LES+NPTP PT L + G W L Y+
Sbjct: 98 KLKKALVDSFYGTDRGL-RVSRDTRAEIVELITQLESKNPTPAPTEALTLLNGKWILAYT 156
Query: 107 TITILGSKRTK-LGLRDFITLGDFFQSIDVAKGKAVNVIKFNVRGLNLLNGQLTIEASFK 165
T L ++ L L + + + Q+ID N ++F+ L +T A F+
Sbjct: 157 TFAGLFPLLSRNLPL---VKVEEISQTIDSENLTVQNSVQFSGP---LATTSITTNAKFE 210
Query: 166 IASKSRVDIAYDNSTITPEQLMN--MFRKNYDLL-----LGIFN---------------- 202
+ S RV I ++ I QL + + N D L FN
Sbjct: 211 VRSPLRVHIKFEEGVIGTPQLTDSIVIPDNVDFLGQKIDFTPFNGIISSLQDTASNVAKT 270
Query: 203 ----P-----------DGWLEISYVDDTMRIGRDDKGNIFILERSSSA 235
P + WL +Y+D+ +RI R D G++F+L + S+
Sbjct: 271 ISSQPPIKFSISNTRVESWLLTTYLDEDLRISRGDGGSVFVLLKEGSS 318
>sp|Q9ZWQ8|PAP_CITUN Plastid-lipid-associated protein, chloroplastic OS=Citrus unshiu
GN=PAP PE=2 SV=1
Length = 323
Score = 61.2 bits (147), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 91/220 (41%), Gaps = 43/220 (19%)
Query: 48 IKTELLQVVQGINRGIFGVPSAKKSEIEALVELLESQNPTPHPTANLDKVGGTWKLVYST 107
+K L+ G +RG+ S ++EI L+ LE++NPTP PT L + W LVY++
Sbjct: 99 LKKALVDSFYGTDRGLNAT-SETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTS 157
Query: 108 ITILGSKRTKLGLRDFITLGDFFQSIDVAKGKAVNVIKFNVRGLNLLNGQLTIEASFKIA 167
+ L ++ G + + Q+ID N I+F L ++ A F++
Sbjct: 158 FSGLFPLLSR-GTLPLARVEEISQTIDSENFTVQNSIQF---AGPLATTSISTNAKFEVR 213
Query: 168 SKSRVDIAYDNSTITPEQLMN--MFRKNYDLL-----LGIF------------------- 201
S RV I ++ I Q+ + + +N + L L F
Sbjct: 214 SPKRVQIKFEEGVIGTPQVTDSLVLPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTIS 273
Query: 202 ------------NPDGWLEISYVDDTMRIGRDDKGNIFIL 229
N WL +Y+D+ +RI R D G++F+
Sbjct: 274 SQPPLKFSISNSNAQSWLLTTYLDEDLRISRADAGSVFVF 313
>sp|Q9LW57|PAP6_ARATH Probable plastid-lipid-associated protein 6, chloroplastic
OS=Arabidopsis thaliana GN=PAP6 PE=1 SV=1
Length = 284
Score = 61.2 bits (147), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 88/187 (47%), Gaps = 17/187 (9%)
Query: 58 GINRGIFG-VPSAKKSEIEALVELLESQNPTPHPTANLDKVGGTWKLVYSTI---TILGS 113
G+NRG+ V +++E+ A EL + P T +LDK+ G W+L+YS+ LG
Sbjct: 97 GLNRGLVASVDDLERAEVAA-KELETAGGPV-DLTDDLDKLQGKWRLLYSSAFSSRSLGG 154
Query: 114 KRTKL--GLRDFITLGDFFQSIDVAKGKAVNVIKFNVRG---LNLLNGQLTIEASFKIAS 168
R L G +TLG FQ IDV N+ + + L T+ F++
Sbjct: 155 SRPGLPTGRLIPVTLGQVFQRIDVFSKDFDNIAEVELGAPWPFPPLEATATLAHKFELLG 214
Query: 169 KSRVDIAYDNSTI-TPEQLMNMFRKNYDLLLGIFNPD-----GWLEISYVDDTMRIGRDD 222
++ I ++ +T+ T L + + L F P G E++YVDDTMRI R D
Sbjct: 215 TCKIKITFEKTTVKTSGNLSQIPPFDIPRLPDSFRPSSNPGTGDFEVTYVDDTMRITRGD 274
Query: 223 KGNIFIL 229
+G + +
Sbjct: 275 RGELRVF 281
>sp|Q94FZ9|PAP1_BRACM Plastid lipid-associated protein 1, chloroplastic OS=Brassica
campestris GN=PAP1 PE=1 SV=1
Length = 327
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 93/230 (40%), Gaps = 49/230 (21%)
Query: 47 QIKTELLQVVQGINRGIFGVPSAKKSEIEALVELLESQNPTPHPTANLDKVGGTWKLVYS 106
++K L + G +RG+ S ++EI L+ LES+NP P P L + G W LVY+
Sbjct: 102 RLKRVLAGSLYGTDRGL-SASSETRAEISELITQLESKNPNPAPNEALFLLNGKWILVYT 160
Query: 107 TIT---ILGSKRTKLGLRDFITLGDFFQSIDVAKGKAVNVIKFNVRGLNLLNGQLTIEAS 163
+ L S+R + + + + Q+ID N ++F L L+ A
Sbjct: 161 SFVGLFPLLSRR----ISPLVKVDEISQTIDSDSFTVHNSVRF---ASPLATTSLSTNAK 213
Query: 164 FKIASKSRVDIAYDNSTITPEQLMNMFR-KNYDLLLGI---FNP---------------- 203
F++ S RV + ++ I QL + + +LG NP
Sbjct: 214 FEVRSPKRVQVKFEQGVIGTPQLTDSIEIPEFVEVLGQKIDLNPIKGLLTSVQDTASSVA 273
Query: 204 ------------------DGWLEISYVDDTMRIGRDDKGNIFILERSSSA 235
WL +Y+D +RI R D G++F+L R S+
Sbjct: 274 RTISSQPPLKFSLPGDSAQSWLLTTYLDKDLRISRGDGGSVFVLIREGSS 323
>sp|Q94KU6|PAP2_BRACM Plastid lipid-associated protein 2, chloroplastic OS=Brassica
campestris GN=PAP2 PE=1 SV=1
Length = 319
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 92/225 (40%), Gaps = 43/225 (19%)
Query: 48 IKTELLQVVQGINRGIFGVPSAKKSEIEALVELLESQNPTPHPTANLDKVGGTWKLVYST 107
+K L+ + G +RG+ S ++EI L+ LES+NPTP PT L + G W L Y++
Sbjct: 95 LKRSLVDSLYGTDRGL-SASSETRAEIGDLITQLESKNPTPAPTDALFLLNGKWILAYTS 153
Query: 108 ITILGSKRTKLGLRDFITLGDFFQSIDVAKGKAVNVIKFNVRGLNLLNGQLTIEASFKIA 167
L ++ G+ + + + Q+ID N + F L ++ A F+I
Sbjct: 154 FVGLFPLLSR-GIVPLVKVDEISQTIDSDNFTVENSVLF---AGPLATTSISTNAKFEIR 209
Query: 168 SKSRVDIAYDNSTITPEQLMNMFR-KNYDLLLGI-------------------------- 200
S RV I ++ I QL + Y LG
Sbjct: 210 SPKRVQIKFEEGVIGTPQLTDSIEIPEYVEFLGQKIDLTPIRGLLTSVQDTATSVARTIS 269
Query: 201 ------FNPDG-----WLEISYVDDTMRIGRDDKGNIFILERSSS 234
F+ G WL +Y+D +RI R D G++F+L + S
Sbjct: 270 SQPPLKFSLPGDSAQSWLLTTYLDKDIRISRGDGGSVFVLIKEGS 314
>sp|O81439|PAP1_ARATH Probable plastid-lipid-associated protein 1, chloroplastic
OS=Arabidopsis thaliana GN=PAP1 PE=1 SV=1
Length = 318
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 94/230 (40%), Gaps = 49/230 (21%)
Query: 47 QIKTELLQVVQGINRGIFGVPSAKKSEIEALVELLESQNPTPHPTANLDKVGGTWKLVYS 106
++K L + G +RG+ V S ++EI L+ LES+NPTP P L + G W L Y+
Sbjct: 93 RLKRSLADSLYGTDRGL-SVSSDTRAEISELITQLESKNPTPAPNEALFLLNGKWILAYT 151
Query: 107 TIT---ILGSKRTKLGLRDFITLGDFFQSIDVAKGKAVNVIKFNVRGLNLLNGQLTIEAS 163
+ L S+R + + + + Q+ID N ++F + A
Sbjct: 152 SFVGLFPLLSRR----IEPLVKVDEISQTIDSDSFTVQNSVRF---AGPFSTTSFSTNAK 204
Query: 164 FKIASKSRVDIAYDNSTITPEQL---------MNMFRKNYDL--LLGIF----------- 201
F+I S RV I ++ I QL + + + DL + G+
Sbjct: 205 FEIRSPKRVQIKFEQGVIGTPQLTDSIEIPESVEVLGQKIDLNPIKGLLTSVQDTASSVA 264
Query: 202 ----------------NPDGWLEISYVDDTMRIGRDDKGNIFILERSSSA 235
N WL +Y+D +RI R D G++++L + S+
Sbjct: 265 RTISNQPPLKFSLPSDNTQSWLLTTYLDKDLRISRGDGGSVYVLIKEGSS 314
>sp|Q94KU5|PAP3_BRACM Plastid lipid-associated protein 3, chloroplastic OS=Brassica
campestris GN=PAP3 PE=2 SV=1
Length = 360
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 109/269 (40%), Gaps = 53/269 (19%)
Query: 10 KSTSFRSIYTAKVAEQSSGLIGDDRETRDSSDKRTLT-QIKTELLQVVQGINRGIFGVPS 68
KS S + AE D+ E R++ D T ++K L V G G F S
Sbjct: 98 KSESVPEESVTRFAESDPPTNEDEWEEREADDGVDKTWELKRCLADTVYGTELG-FRAGS 156
Query: 69 AKKSEIEALVELLESQNPTPHPTANLDKVGGTWKLVYST----ITILGSKRTKLGLRDFI 124
++E+ +V LE+ NPT P N + + G W L+Y+ + +L + T L +
Sbjct: 157 EVRAEVLEIVNQLEALNPTQAPVENPELLDGNWVLLYTAFSELLPLLAAGSTPL-----L 211
Query: 125 TLGDFFQSIDVAKGKAVNVIKFNVRGLNLLNGQLTIEASFKIASKSRVDIAYDNSTITPE 184
+ QSID K++++ + + ASF++ + SR+++++ T+ P
Sbjct: 212 KVKSISQSIDT---KSLSIDNSTTLSSPFADFSFSATASFEVRTPSRIEVSFKEGTLKPP 268
Query: 185 QL---------MNMFRK--NYDLLLGIFNP---------------------------DGW 206
++ + +F + N L NP W
Sbjct: 269 EIKSSVDLPESVGVFGQEINLSFLKQSLNPLQDVAANISRAISGQPPLKLPFPGNRGSSW 328
Query: 207 LEISYVDDTMRIGRDDKGNIFILERSSSA 235
L +Y+D +RI R D G +F+L R S+
Sbjct: 329 LLTTYLDKDLRISRGD-GGLFVLAREGSS 356
>sp|O82291|PAP3_ARATH Probable plastid-lipid-associated protein 3, chloroplastic
OS=Arabidopsis thaliana GN=PAP3 PE=1 SV=1
Length = 376
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 98/237 (41%), Gaps = 64/237 (27%)
Query: 47 QIKTELLQVVQGINRGIFGVPSAKKSEIEALVELLESQNPTPHPTANLDKVGGTWKLVYS 106
++K L V G G F S ++E+ LV LE+ NPTP P N + + G W L+Y+
Sbjct: 152 ELKRCLADSVYGTELG-FKAGSEVRAEVLELVNQLEALNPTPAPLENPELLDGNWVLLYT 210
Query: 107 T----ITILGSKRTKLGLRDFITLGDFFQSIDVAKGKAVNVIKFNVRGLN--LLNGQLTI 160
I +L + T L + + QSID N+I N L+ + +
Sbjct: 211 AFSELIPLLAAGSTPL-----LKVKSISQSIDTN-----NLIIDNSTTLSSPFADFSFSA 260
Query: 161 EASFKIASKSRVDIAYDNSTITPEQLMNMFRKNYDLL--LGIF-------------NP-- 203
ASF++ S SR+++++ T+ P + + + DL +G+F NP
Sbjct: 261 TASFEVRSPSRIEVSFKEGTLKPP----VIKSSVDLPESVGVFGQQISLSLLKQSLNPLQ 316
Query: 204 -------------------------DGWLEISYVDDTMRIGRDDKGNIFILERSSSA 235
WL +Y+D +RI R D G +F+L R S+
Sbjct: 317 DVAANISRALSGQPPLKLPFPGNRGSSWLLTTYLDKDLRISRGD-GGLFVLAREGSS 372
>sp|O81304|PAP11_ARATH Probable plastid-lipid-associated protein 11, chloroplastic
OS=Arabidopsis thaliana GN=PAP11 PE=2 SV=1
Length = 212
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 87/187 (46%), Gaps = 19/187 (10%)
Query: 47 QIKTELLQVVQGINRGIFGVPSAKKSEIEALVELLESQNPTPHPTANLD-KVGGTWKLVY 105
+ K +LL+++ +RG+ KK + +V +ES + D + TW+L++
Sbjct: 35 RAKRKLLELISEEDRGLRTQKDPKKRD--EIVNAIESMTVIGRSSITTDDSLSATWRLLW 92
Query: 106 STITILGSKRTKLGLRDFITLGDFFQSIDVAKGKAVNVIKFNVRGLNLLNGQLTIEASFK 165
+T K GL T GD Q IDV K NVI F +G + +
Sbjct: 93 TTEKEQLFIIEKAGLFG-TTAGDVLQVIDVNKRILNNVITFPP------DGVFFVRSDID 145
Query: 166 IASKSRVDIAYDNSTITPEQLMNMFRKNYDLLLGIFNPDGWLEISYVDDTMRIGRDDKGN 225
IAS RV+ ++++ + KN++L L F GW E Y+D +R+ +D +G+
Sbjct: 146 IASPQRVNFRFNSAVLRG--------KNWELPLPPFG-KGWFENVYMDGEIRVAKDIRGD 196
Query: 226 IFILERS 232
I++R+
Sbjct: 197 YLIVDRA 203
>sp|Q8LAP6|PAP12_ARATH Probable plastid-lipid-associated protein 12, chloroplastic
OS=Arabidopsis thaliana GN=PAP12 PE=2 SV=1
Length = 409
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 107/226 (47%), Gaps = 23/226 (10%)
Query: 15 RSIYTAKVAEQSSGLIGDDRETRDSSDKRTLTQIKTELLQVVQGIN-RGIFGVPSAKKSE 73
R+ T +++ SS + D +T+ SS + +L+ + GI RG P + ++
Sbjct: 47 RNCRTLRISCSSSSTVTD--QTQQSS----FNDAELKLIDALIGIQGRGKSASPK-QLND 99
Query: 74 IEALVELLESQNPTPHPTANLDKVGGTWKLVYSTITILGS--KRTKLGLRDFITLGDFFQ 131
+E+ V++LE +PT + D + G W+L+++T S +RT G+ F D +
Sbjct: 100 VESAVKVLEGLEGIQNPTDS-DLIEGRWRLMFTTRPGTASPIQRTFTGVDVFTVFQDVYL 158
Query: 132 SIDVAKGKAVNVIKFNVRGLNLLNGQLTIEASFKIASKSRVDIAYDNSTITPEQLMNMFR 191
+ N++KF+ G+L +EA I RV +D + + L F+
Sbjct: 159 KA-TNDPRVSNIVKFSD-----FIGELKVEAVASIKDGKRVLFRFDRAAFDLKFLP--FK 210
Query: 192 KNYDLLLGIFNPD--GWLEISYVDDT--MRIGRDDKGNIFILERSS 233
Y + + + GWL+ +Y+ + +RI R +KG F+L++ +
Sbjct: 211 VPYPVPFRLLGDEAKGWLDTTYLSPSGNLRISRGNKGTTFVLQKET 256
>sp|Q7XBW5|PAP3_ORYSJ Probable plastid-lipid-associated protein 3, chloroplastic OS=Oryza
sativa subsp. japonica GN=PAP3 PE=3 SV=1
Length = 374
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 89/227 (39%), Gaps = 45/227 (19%)
Query: 48 IKTELLQVVQGINRGIFGVPSAKKSEIEALVELLESQNPTPHPTANLDKVGGTWKLVYST 107
+K L+ V G + G F S + E+ LV LE+ NPTP P + G W L+Y+
Sbjct: 149 LKRCLVDTVYGSDLG-FRASSEVRGEVLELVTQLEATNPTPEPVQATHLLAGNWILIYTA 207
Query: 108 ITILGSKRTKLGLRDFITLGDFFQSIDVAKGKAVNVIKFNVRGLNLLNGQLTIEASFKIA 167
+ L +G + + Q ID ++ ++ + + + ASF +
Sbjct: 208 YSEL-LPILAVGAAPLFKVDEISQEIDT---NSMTIVNASTISSPFASFSFSATASFDVQ 263
Query: 168 SKSRVDIAYDNSTITP-------------------------EQLMNMFRKNYDLLLGIFN 202
S SR+++ + + P +Q++N ++ + + G +
Sbjct: 264 SPSRIEVQFKEGSFQPPKISSSVDLPAEVDIFGQKISLGPVQQVLNPLQQAFASIAGSIS 323
Query: 203 --PD------------GWLEISYVDDTMRIGRDDKGNIFILERSSSA 235
P WL +Y+D +RI R D G +FIL + S
Sbjct: 324 GQPPLKLPIPGNNRARSWLLTTYLDKDLRISRGD-GGLFILVKEGSP 369
>sp|Q6DBN2|PAP5_ARATH Probable plastid-lipid-associated protein 5, chloroplastic
OS=Arabidopsis thaliana GN=PAP5 PE=2 SV=1
Length = 234
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 87/194 (44%), Gaps = 43/194 (22%)
Query: 47 QIKTELLQVVQGINRGIFGVPSAKKSEIEALVELLESQNPTPHPTANLDKVGGTWKLVYS 106
Q+K EL++ ++ + RG P + I+ L +E+ NPT P + D + G W+L+Y+
Sbjct: 64 QLKHELVEAIEPLERGATASPD-DQLLIDQLARKVEAVNPTKEPLKS-DLINGKWELIYT 121
Query: 107 T-ITILGSKRTKLGLRDFITLGDFFQSI--DVAKGKAVNVIKFNVRGLNLLNGQLTIEAS 163
T IL +K+ + LR +Q I D K + + F N + G LT S
Sbjct: 122 TSAAILQAKKPRF-LRSLTN----YQCINMDTLKVQRMETWPF----YNSVTGDLTPLNS 172
Query: 164 FKIASKSRVDIAYDNSTITPEQLMNMFRKNYDLLLGIFN---PDGW----LEISYVDDTM 216
+A K + +F+ +LG PDG LEI+YVD+ +
Sbjct: 173 KTVAVK-----------------LQVFK-----ILGFIPVKAPDGTARGELEITYVDEEL 210
Query: 217 RIGRDDKGNIFILE 230
RI R +FIL+
Sbjct: 211 RISRGKGNLLFILK 224
>sp|Q9ZP40|PG1_PEA Plastoglobulin-1, chloroplastic OS=Pisum sativum GN=PG1 PE=1 SV=1
Length = 358
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 90/229 (39%), Gaps = 44/229 (19%)
Query: 45 LTQIKTELLQVVQGINRGIFGVPSAKKSEIEALVELLESQNPTPHPTANLDKVGGTWKLV 104
L +K L+ V G G F S ++E+ V LE+ NPTP P D + G W L+
Sbjct: 132 LEGLKRSLVDTVYGTELG-FRARSEVRAEVSEFVAQLEAANPTPAPVEEPDLLNGNWVLL 190
Query: 105 YSTITILGSKRTKLGLRDFITLGDFFQSIDVAKGKAVNVIKFNVRGLNLLNGQLTIEASF 164
Y+ + L G + L Q+ID VN + + ++ ASF
Sbjct: 191 YTASSEL-LPLLAAGSLPLLKLDKISQTIDTDSFTVVNSTTLSS---PFASFSFSVSASF 246
Query: 165 KIASKSRVDIAYDNSTITPEQL---------MNMFRKNYDL--LLGIFNP---------- 203
++ S +R+ + + ++ P ++ +N+F + L LL P
Sbjct: 247 EVRSPTRIQVTFKEGSLQPPEIKSKIDLPENINIFGQQLSLGPLLQSLGPLENVVANISR 306
Query: 204 -----------------DGWLEISYVDDTMRIGRDDKGNIFILERSSSA 235
WL +Y+D +RI R D G +F+L R S+
Sbjct: 307 VISGQSPLKIPIPGERTSSWLITTYLDKDLRISRGD-GGLFVLAREGSS 354
>sp|Q941D3|PAP8_ARATH Probable plastid-lipid-associated protein 8, chloroplastic
OS=Arabidopsis thaliana GN=PAP8 PE=2 SV=1
Length = 239
Score = 41.6 bits (96), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 19/137 (13%)
Query: 99 GTWKLVYST--ITILGSKRTKLGLRDFITLGDFFQSIDVAKGKAVNVI--KFNVRGLNLL 154
G W++VY + + G R+ +G R F + Q+ID A +++ K ++ L
Sbjct: 116 GDWEVVYCSRPTSPGGGYRSVIG-RLFFKTKEMIQAID-----APDIVRNKVSINAFGFL 169
Query: 155 NGQLTIEASFKIASKSRVDIAYDNSTITPEQLMNMFRKNYDLLLGIFNPDGWLEISYVDD 214
+G +++ K V + ++ PE + Y F + L I+YVD+
Sbjct: 170 DGDVSLTGKLKALDSEWVQVIFE----PPEIKVGSLEFKYG-----FESEVKLRITYVDE 220
Query: 215 TMRIGRDDKGNIFILER 231
+R+G KG++F+ R
Sbjct: 221 KLRLGLGSKGSLFVFRR 237
>sp|B2GGG9|SYS_KOCRD Serine--tRNA ligase OS=Kocuria rhizophila (strain ATCC 9341 / DSM
348 / NBRC 103217 / DC2201) GN=serS PE=3 SV=1
Length = 434
Score = 36.2 bits (82), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 15/102 (14%)
Query: 121 RDFITLGDFFQSIDVAKGKAVNVIKFNVRGLNLLNGQLTIEASFKIASKSRVDIAYDNST 180
RD + LG+ ID+ +G V+ +F L +E + +A++ D+A DN
Sbjct: 138 RDHLELGELLDGIDMERGAKVSGSRFYF----LKRDVARLETALLMAAQ---DLALDNGF 190
Query: 181 ITPEQLMNMFRKNYDLLLGIFNPDGWLEISYVDDTMRIGRDD 222
I P N+ R GI N G+ ++ + D+ R+G+DD
Sbjct: 191 I-PMTTPNLVRP------GIMNGTGF-DVEHDDEIYRVGKDD 224
>sp|P34371|BAT42_CAEEL BTB and MATH domain-containing protein 42 OS=Caenorhabditis elegans
GN=bath-42 PE=1 SV=1
Length = 410
Score = 33.9 bits (76), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
Query: 137 KGKAVNVIKFNVRGLNLLNGQLTIEASFKI----ASKSRVDIAYDNSTITPEQLMNMFRK 192
+ + VN + F +R + L G+ I F+I A+ RV + D T +Q F+
Sbjct: 93 RDEDVNNVSFFLRQVGLARGEEPIMTEFQIYALDANNQRVSVCRDTKDFTNQQGRGKFQV 152
Query: 193 NYDLLLGIFNPDGWL----EISY 211
+ D +LG DG L E+ Y
Sbjct: 153 SRDKMLGALRSDGTLFLICEVEY 175
>sp|B2RXC1|TPC11_MOUSE Trafficking protein particle complex subunit 11 OS=Mus musculus
GN=Trappc11 PE=2 SV=1
Length = 1133
Score = 33.1 bits (74), Expect = 1.7, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 70 KKSEIEA-LVELLESQNPTPHPTANLDKVGGTWKLVYSTITILGSKRTKLGLRDFI 124
+KS IE L+ +L +++P P P ++ V KL +++ GS ++G++DF+
Sbjct: 530 QKSRIEKNLMNVLMNESPDPEPDCDVLAVKTAQKLWADRVSLAGSNVFQIGVQDFV 585
>sp|A6QLC7|TPC11_BOVIN Trafficking protein particle complex subunit 11 OS=Bos taurus
GN=TRAPPC11 PE=2 SV=1
Length = 1133
Score = 32.7 bits (73), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 70 KKSEIEA-LVELLESQNPTPHPTANLDKVGGTWKLVYSTITILGSKRTKLGLRDFITL 126
+KS IE L+ +L +++P P P ++ V KL I++ GS +G++DF+
Sbjct: 530 QKSRIEKNLINVLMNESPDPEPDCDILAVKTAQKLWVDRISLAGSNVFTIGVQDFVPF 587
>sp|Q7NS06|UPP_CHRVO Uracil phosphoribosyltransferase OS=Chromobacterium violaceum
(strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 /
NCIMB 9131 / NCTC 9757) GN=upp PE=3 SV=1
Length = 210
Score = 32.3 bits (72), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 9/81 (11%)
Query: 121 RDF----ITLGDFFQSIDVA--KGKAVNVIKFNVRGLNLLNGQLTIEASFKIASKSRVDI 174
RDF +T+ + IDV KGK V V+ G+ +L+G L + S KI S V +
Sbjct: 45 RDFELESVTIDGWCGKIDVKQIKGKKVTVVPILRAGIGMLDGVLDLVPSAKI---SVVGL 101
Query: 175 AYDNSTITPEQLMNMFRKNYD 195
A + T+ P F N D
Sbjct: 102 ARNEETLEPVSYFEKFVGNLD 122
>sp|Q7Z392|TPC11_HUMAN Trafficking protein particle complex subunit 11 OS=Homo sapiens
GN=TRAPPC11 PE=1 SV=2
Length = 1133
Score = 32.3 bits (72), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 70 KKSEIEA-LVELLESQNPTPHPTANLDKVGGTWKLVYSTITILGSKRTKLGLRDFI 124
+KS IE L+ +L +++P P P ++ V KL I++ GS +G++DF+
Sbjct: 530 QKSRIEKNLINVLMNESPDPEPDCDILAVKTAQKLWADRISLAGSNIFTIGVQDFV 585
>sp|Q9M2P7|PAP9_ARATH Probable plastid-lipid-associated protein 9, chloroplastic
OS=Arabidopsis thaliana GN=PAP9 PE=1 SV=1
Length = 308
Score = 31.2 bits (69), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 69/181 (38%), Gaps = 35/181 (19%)
Query: 81 LESQNPTPHPTANLDKVGGTWKLVYSTITILGSKRTKLGLRDF----ITLGDFFQSIDVA 136
LE NPTP PT + + G W + + GS ++ F ++L + I
Sbjct: 113 LERLNPTPRPTTS-PYLEGRWSFEWFGVNTPGSLAVRVMFERFPSTLVSLSNMEIFIKDN 171
Query: 137 KGKAVNVIKFNVRGLNLLNGQLTIEASFKIASKSRVDIAY-----DNSTI----TPEQLM 187
KA N++ LN + ++T+ + I R+ Y ++ T+ P+QL
Sbjct: 172 NTKATA----NIKLLNSIENKITLSSKLTIEGPLRMKEEYLEGLLESPTVIEEAVPDQLR 227
Query: 188 NMFRKNYDLLLGIFNP-----------------DGWLEISYVDDTMRIGRDDKGNIFILE 230
+ + L + P + ISY+DD + I RD G +L
Sbjct: 228 GLLGQATTTLQQLPEPIKDTLANGLRIPLGGTYQRFFMISYLDDEILIVRDTAGVPEVLT 287
Query: 231 R 231
R
Sbjct: 288 R 288
>sp|Q5ZI89|TPC11_CHICK Trafficking protein particle complex subunit 11 OS=Gallus gallus
GN=TRAPPC11 PE=2 SV=1
Length = 1132
Score = 30.8 bits (68), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 70 KKSEIEA-LVELLESQNPTPHPTANLDKVGGTWKLVYSTITILGSKRTKLGLRDFITL 126
+KS IE L+++L +++P P P + V + KL +++ GS + ++DFI
Sbjct: 530 QKSRIEKNLIKVLMNESPDPEPDCDAAAVKASQKLWSDRVSLAGSNVFTIEVQDFIPF 587
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.134 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,823,558
Number of Sequences: 539616
Number of extensions: 3385560
Number of successful extensions: 9266
Number of sequences better than 100.0: 41
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 9220
Number of HSP's gapped (non-prelim): 55
length of query: 241
length of database: 191,569,459
effective HSP length: 114
effective length of query: 127
effective length of database: 130,053,235
effective search space: 16516760845
effective search space used: 16516760845
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)