Query 044593
Match_columns 335
No_of_seqs 317 out of 2870
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 08:03:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044593.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044593hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ggo_A Prephenate dehydrogenas 100.0 6.4E-46 2.2E-50 350.2 26.3 260 26-298 28-306 (314)
2 3ktd_A Prephenate dehydrogenas 100.0 2.2E-46 7.4E-51 356.4 16.2 257 29-298 6-284 (341)
3 2pv7_A T-protein [includes: ch 100.0 9.8E-38 3.4E-42 292.1 24.9 261 7-299 2-271 (298)
4 3b1f_A Putative prephenate deh 100.0 2.3E-36 7.9E-41 280.9 18.6 259 29-298 4-282 (290)
5 2g5c_A Prephenate dehydrogenas 100.0 6.5E-35 2.2E-39 269.9 25.4 255 31-298 1-274 (281)
6 2f1k_A Prephenate dehydrogenas 100.0 2.2E-32 7.4E-37 252.6 26.1 252 32-298 1-270 (279)
7 1np3_A Ketol-acid reductoisome 100.0 3.1E-30 1.1E-34 245.4 13.0 242 29-292 14-289 (338)
8 3c24_A Putative oxidoreductase 99.9 2.2E-25 7.7E-30 206.7 14.2 232 31-289 11-269 (286)
9 2rcy_A Pyrroline carboxylate r 99.9 5.8E-24 2E-28 194.1 18.1 235 29-290 2-254 (262)
10 3tri_A Pyrroline-5-carboxylate 99.9 9.6E-24 3.3E-28 195.5 18.4 229 29-272 1-246 (280)
11 2izz_A Pyrroline-5-carboxylate 99.9 2.1E-22 7.1E-27 190.0 18.9 229 29-273 20-269 (322)
12 3dfu_A Uncharacterized protein 99.9 8.1E-23 2.8E-27 183.4 12.2 148 30-220 5-153 (232)
13 3gt0_A Pyrroline-5-carboxylate 99.9 1.4E-22 4.7E-27 184.1 13.6 225 31-271 2-243 (247)
14 2ahr_A Putative pyrroline carb 99.9 1.3E-21 4.5E-26 178.4 19.8 237 30-288 2-251 (259)
15 1yqg_A Pyrroline-5-carboxylate 99.8 3E-20 1E-24 169.5 18.1 222 32-272 1-236 (263)
16 3doj_A AT3G25530, dehydrogenas 99.8 5.3E-20 1.8E-24 172.6 18.3 177 27-215 17-198 (310)
17 3pef_A 6-phosphogluconate dehy 99.8 3.5E-20 1.2E-24 171.7 16.9 172 32-215 2-178 (287)
18 3g0o_A 3-hydroxyisobutyrate de 99.8 2.2E-19 7.5E-24 167.7 17.6 172 30-213 6-184 (303)
19 3obb_A Probable 3-hydroxyisobu 99.8 3.2E-19 1.1E-23 166.7 18.2 173 31-215 3-180 (300)
20 2h78_A Hibadh, 3-hydroxyisobut 99.8 2.8E-19 9.4E-24 166.7 17.0 174 30-215 2-180 (302)
21 3qsg_A NAD-binding phosphogluc 99.8 9.8E-19 3.4E-23 164.2 18.6 176 24-214 17-199 (312)
22 3pdu_A 3-hydroxyisobutyrate de 99.8 3.8E-19 1.3E-23 164.7 15.5 173 31-215 1-178 (287)
23 2dpo_A L-gulonate 3-dehydrogen 99.8 4.5E-18 1.5E-22 160.2 22.0 164 29-206 4-194 (319)
24 1ygy_A PGDH, D-3-phosphoglycer 99.8 7.8E-22 2.7E-26 197.8 -4.1 234 28-283 139-389 (529)
25 3qha_A Putative oxidoreductase 99.8 7.9E-19 2.7E-23 163.5 15.8 172 31-215 15-188 (296)
26 3d1l_A Putative NADP oxidoredu 99.8 2.7E-18 9.1E-23 157.0 17.2 169 31-215 10-186 (266)
27 4ezb_A Uncharacterized conserv 99.8 3.6E-18 1.2E-22 160.7 18.1 169 30-215 23-202 (317)
28 4gbj_A 6-phosphogluconate dehy 99.8 2E-18 7E-23 161.0 15.0 173 31-215 5-181 (297)
29 4dll_A 2-hydroxy-3-oxopropiona 99.8 3.2E-18 1.1E-22 161.2 16.0 174 29-215 29-206 (320)
30 4e21_A 6-phosphogluconate dehy 99.8 2.9E-18 1E-22 163.9 13.6 171 30-213 21-215 (358)
31 4e12_A Diketoreductase; oxidor 99.8 8.9E-18 3.1E-22 155.4 14.4 166 29-208 2-194 (283)
32 3l6d_A Putative oxidoreductase 99.7 4.7E-17 1.6E-21 152.3 18.5 159 29-200 7-171 (306)
33 1yb4_A Tartronic semialdehyde 99.7 4.2E-17 1.4E-21 150.9 15.5 174 30-216 2-180 (295)
34 1vpd_A Tartronate semialdehyde 99.7 3E-17 1E-21 152.3 14.4 173 31-215 5-182 (299)
35 4gwg_A 6-phosphogluconate dehy 99.7 2E-17 6.9E-22 163.5 13.5 173 29-214 2-191 (484)
36 2uyy_A N-PAC protein; long-cha 99.7 3.8E-16 1.3E-20 146.2 18.6 160 31-201 30-193 (316)
37 2zyd_A 6-phosphogluconate dehy 99.7 6E-17 2.1E-21 160.5 12.5 174 28-214 12-201 (480)
38 2ew2_A 2-dehydropantoate 2-red 99.7 9.5E-16 3.3E-20 142.5 19.6 176 30-213 2-196 (316)
39 1zej_A HBD-9, 3-hydroxyacyl-CO 99.7 1.9E-16 6.4E-21 147.2 13.9 152 30-200 11-172 (293)
40 2cvz_A Dehydrogenase, 3-hydrox 99.7 8.7E-17 3E-21 148.2 11.4 168 31-213 1-170 (289)
41 2raf_A Putative dinucleotide-b 99.7 2E-16 6.7E-21 140.1 12.9 153 30-209 18-185 (209)
42 2p4q_A 6-phosphogluconate dehy 99.7 1.3E-16 4.5E-21 158.6 12.9 171 30-213 9-195 (497)
43 3cky_A 2-hydroxymethyl glutara 99.7 2.5E-16 8.5E-21 146.3 13.8 173 30-214 3-180 (301)
44 3k96_A Glycerol-3-phosphate de 99.7 1.4E-16 4.8E-21 152.2 12.2 219 24-254 20-261 (356)
45 3k6j_A Protein F01G10.3, confi 99.7 1.2E-15 4.2E-20 149.6 18.1 159 27-200 50-231 (460)
46 4huj_A Uncharacterized protein 99.7 8.6E-16 3E-20 136.9 15.3 168 28-205 20-203 (220)
47 1f0y_A HCDH, L-3-hydroxyacyl-C 99.7 9.6E-16 3.3E-20 142.8 16.1 156 30-199 14-200 (302)
48 2i76_A Hypothetical protein; N 99.7 2.5E-16 8.7E-21 145.1 12.0 153 31-205 2-159 (276)
49 2iz1_A 6-phosphogluconate dehy 99.7 8.5E-16 2.9E-20 152.1 15.5 173 29-214 3-192 (474)
50 2gf2_A Hibadh, 3-hydroxyisobut 99.7 8.5E-16 2.9E-20 142.3 13.5 170 32-212 1-174 (296)
51 3dtt_A NADP oxidoreductase; st 99.6 9.1E-16 3.1E-20 139.0 12.7 185 27-221 15-234 (245)
52 2pgd_A 6-phosphogluconate dehy 99.6 5.4E-16 1.9E-20 153.8 11.5 170 32-213 3-188 (482)
53 3mog_A Probable 3-hydroxybutyr 99.6 1.3E-15 4.4E-20 150.9 13.0 155 30-199 4-184 (483)
54 1i36_A Conserved hypothetical 99.6 6.3E-15 2.2E-19 134.3 15.9 161 32-213 1-164 (264)
55 3fr7_A Putative ketol-acid red 99.6 8.8E-15 3E-19 142.7 16.0 190 29-227 51-273 (525)
56 1pgj_A 6PGDH, 6-PGDH, 6-phosph 99.6 3E-15 1E-19 148.2 12.0 168 32-212 2-189 (478)
57 1yj8_A Glycerol-3-phosphate de 99.6 6.1E-15 2.1E-19 141.5 12.5 175 29-215 19-230 (375)
58 1txg_A Glycerol-3-phosphate de 99.6 6.7E-15 2.3E-19 138.4 12.5 174 32-214 1-195 (335)
59 2vns_A Metalloreductase steap3 99.6 8.4E-15 2.9E-19 130.1 11.4 167 29-207 26-201 (215)
60 3pid_A UDP-glucose 6-dehydroge 99.6 1.1E-13 3.7E-18 134.8 19.7 174 28-215 33-240 (432)
61 3ado_A Lambda-crystallin; L-gu 99.6 2.1E-14 7.2E-19 134.7 13.9 160 29-202 4-190 (319)
62 3gg2_A Sugar dehydrogenase, UD 99.6 2E-14 6.7E-19 141.3 14.3 176 32-216 3-220 (450)
63 1mv8_A GMD, GDP-mannose 6-dehy 99.6 3E-14 1E-18 139.6 15.0 175 32-215 1-217 (436)
64 2o3j_A UDP-glucose 6-dehydroge 99.6 7.5E-14 2.6E-18 138.3 17.7 182 29-217 7-236 (481)
65 1zcj_A Peroxisomal bifunctiona 99.6 4.8E-14 1.6E-18 139.1 15.8 158 28-200 34-215 (463)
66 1x0v_A GPD-C, GPDH-C, glycerol 99.6 6.3E-14 2.2E-18 133.0 16.0 205 29-245 6-246 (354)
67 4a7p_A UDP-glucose dehydrogena 99.6 8.6E-14 2.9E-18 136.4 17.1 173 31-215 8-223 (446)
68 1wdk_A Fatty oxidation complex 99.5 3.5E-14 1.2E-18 147.0 14.1 157 29-200 312-494 (715)
69 2q3e_A UDP-glucose 6-dehydroge 99.5 7.5E-14 2.6E-18 137.9 15.9 178 31-213 5-226 (467)
70 1evy_A Glycerol-3-phosphate de 99.5 4.8E-15 1.7E-19 141.6 7.0 167 32-209 16-208 (366)
71 1dlj_A UDP-glucose dehydrogena 99.5 3.6E-13 1.2E-17 130.5 19.7 174 32-215 1-211 (402)
72 1jay_A Coenzyme F420H2:NADP+ o 99.5 2.4E-14 8.1E-19 126.1 9.9 166 32-208 1-189 (212)
73 2wtb_A MFP2, fatty acid multif 99.5 9.4E-14 3.2E-18 143.9 14.1 157 29-200 310-492 (725)
74 3hn2_A 2-dehydropantoate 2-red 99.5 9.7E-13 3.3E-17 123.1 18.3 169 31-210 2-188 (312)
75 3ghy_A Ketopantoate reductase 99.5 7.7E-13 2.6E-17 125.0 16.8 171 29-209 1-207 (335)
76 2qyt_A 2-dehydropantoate 2-red 99.5 1.3E-13 4.4E-18 128.5 11.3 174 30-213 7-206 (317)
77 1ks9_A KPA reductase;, 2-dehyd 99.5 6.5E-14 2.2E-18 128.7 9.1 164 32-209 1-177 (291)
78 1z82_A Glycerol-3-phosphate de 99.5 6.3E-13 2.2E-17 125.5 15.9 154 30-202 13-182 (335)
79 2y0c_A BCEC, UDP-glucose dehyd 99.5 5E-13 1.7E-17 132.2 15.2 174 30-213 7-227 (478)
80 3hwr_A 2-dehydropantoate 2-red 99.5 1.1E-12 3.7E-17 123.2 16.0 165 30-211 18-200 (318)
81 2yjz_A Metalloreductase steap4 99.2 7.1E-15 2.4E-19 129.4 0.0 164 29-206 17-188 (201)
82 3g79_A NDP-N-acetyl-D-galactos 99.4 1.3E-12 4.6E-17 128.8 15.8 178 29-216 16-243 (478)
83 3i83_A 2-dehydropantoate 2-red 99.4 3.8E-12 1.3E-16 119.4 17.4 172 31-211 2-191 (320)
84 2ekl_A D-3-phosphoglycerate de 99.4 1E-12 3.5E-17 123.2 8.6 138 28-170 139-284 (313)
85 1bg6_A N-(1-D-carboxylethyl)-L 99.4 3.1E-12 1.1E-16 121.1 11.8 125 29-155 2-146 (359)
86 3jtm_A Formate dehydrogenase, 99.3 3.4E-12 1.2E-16 121.3 11.4 141 28-170 161-306 (351)
87 1wwk_A Phosphoglycerate dehydr 99.3 2.5E-12 8.6E-17 120.2 10.4 136 28-170 139-282 (307)
88 3ego_A Probable 2-dehydropanto 99.3 5.7E-12 1.9E-16 117.7 12.6 171 31-213 2-186 (307)
89 2w2k_A D-mandelate dehydrogena 99.3 3E-12 1E-16 121.8 10.5 140 28-170 160-305 (348)
90 1gdh_A D-glycerate dehydrogena 99.3 1.9E-12 6.5E-17 121.8 8.6 136 28-170 143-287 (320)
91 3ojo_A CAP5O; rossmann fold, c 99.3 1.7E-11 5.7E-16 119.5 15.3 178 30-216 10-223 (431)
92 2g76_A 3-PGDH, D-3-phosphoglyc 99.3 5E-12 1.7E-16 119.5 10.9 135 28-170 162-304 (335)
93 2nac_A NAD-dependent formate d 99.3 5.4E-12 1.8E-16 121.6 11.2 138 28-170 188-333 (393)
94 3zwc_A Peroxisomal bifunctiona 99.3 1.3E-11 4.4E-16 127.7 14.2 158 27-199 312-493 (742)
95 3ba1_A HPPR, hydroxyphenylpyru 99.3 3.6E-12 1.2E-16 120.5 8.8 132 28-170 161-300 (333)
96 3gvx_A Glycerate dehydrogenase 99.3 3.6E-12 1.2E-16 118.1 8.6 132 27-171 118-257 (290)
97 4dgs_A Dehydrogenase; structur 99.3 1.8E-11 6E-16 115.9 13.2 136 28-170 168-307 (340)
98 4g2n_A D-isomer specific 2-hyd 99.3 1.5E-11 5.3E-16 116.5 11.6 140 28-170 170-312 (345)
99 3evt_A Phosphoglycerate dehydr 99.3 9.6E-12 3.3E-16 117.0 9.5 141 27-170 133-277 (324)
100 1mx3_A CTBP1, C-terminal bindi 99.3 1.1E-11 3.6E-16 117.8 9.4 138 28-170 165-310 (347)
101 2cuk_A Glycerate dehydrogenase 99.3 9.5E-12 3.2E-16 116.5 8.9 131 28-170 141-278 (311)
102 2gcg_A Glyoxylate reductase/hy 99.3 1.1E-11 3.8E-16 116.9 9.1 107 28-137 152-260 (330)
103 3pp8_A Glyoxylate/hydroxypyruv 99.3 2.5E-11 8.4E-16 113.8 11.2 137 27-170 135-279 (315)
104 3gg9_A D-3-phosphoglycerate de 99.2 1.3E-11 4.5E-16 117.4 9.4 108 28-137 157-265 (352)
105 3hg7_A D-isomer specific 2-hyd 99.2 3.1E-11 1.1E-15 113.5 11.6 140 28-170 137-280 (324)
106 2d0i_A Dehydrogenase; structur 99.2 3E-11 1E-15 114.2 10.3 137 28-170 143-285 (333)
107 1qp8_A Formate dehydrogenase; 99.2 3.6E-11 1.2E-15 112.2 10.4 134 28-170 121-261 (303)
108 2pi1_A D-lactate dehydrogenase 99.2 3E-11 1E-15 114.1 9.9 108 28-139 138-246 (334)
109 3g17_A Similar to 2-dehydropan 99.2 2.3E-11 7.8E-16 112.8 8.5 168 31-214 2-175 (294)
110 4e5n_A Thermostable phosphite 99.2 1.9E-11 6.5E-16 115.4 8.0 108 28-138 142-251 (330)
111 4hy3_A Phosphoglycerate oxidor 99.2 1.1E-10 3.8E-15 111.4 13.1 139 28-170 173-315 (365)
112 2dbq_A Glyoxylate reductase; D 99.2 3.2E-11 1.1E-15 114.1 8.8 137 28-169 147-288 (334)
113 4fgw_A Glycerol-3-phosphate de 99.2 8.2E-11 2.8E-15 113.0 11.2 207 29-246 32-283 (391)
114 3ce6_A Adenosylhomocysteinase; 99.2 1E-10 3.5E-15 115.6 12.1 176 29-216 272-464 (494)
115 2j6i_A Formate dehydrogenase; 99.2 4.9E-11 1.7E-15 114.0 8.5 110 28-138 161-272 (364)
116 3k5p_A D-3-phosphoglycerate de 99.2 1.6E-10 5.5E-15 111.8 12.1 122 28-154 153-275 (416)
117 3c7a_A Octopine dehydrogenase; 99.1 1E-10 3.6E-15 112.9 9.8 95 31-127 2-120 (404)
118 1sc6_A PGDH, D-3-phosphoglycer 99.1 1.2E-10 4.3E-15 112.6 10.1 137 28-170 142-287 (404)
119 2hk9_A Shikimate dehydrogenase 99.1 7.9E-11 2.7E-15 108.2 7.6 117 30-150 128-245 (275)
120 2yq5_A D-isomer specific 2-hyd 99.0 2.4E-10 8.1E-15 108.3 6.5 105 28-137 145-250 (343)
121 3vtf_A UDP-glucose 6-dehydroge 99.0 4.1E-09 1.4E-13 102.7 14.9 174 30-213 20-233 (444)
122 1j4a_A D-LDH, D-lactate dehydr 99.0 4.7E-10 1.6E-14 105.9 6.9 107 28-138 143-250 (333)
123 1y81_A Conserved hypothetical 98.9 4.5E-09 1.5E-13 86.7 10.3 105 30-145 13-121 (138)
124 1dxy_A D-2-hydroxyisocaproate 98.9 1.1E-09 3.7E-14 103.5 6.6 106 28-139 142-249 (333)
125 2d5c_A AROE, shikimate 5-dehyd 98.9 1.6E-09 5.5E-14 98.7 6.8 116 30-152 116-234 (263)
126 2i99_A MU-crystallin homolog; 98.9 2.9E-10 1E-14 106.4 1.8 94 28-127 132-230 (312)
127 3oet_A Erythronate-4-phosphate 98.9 7E-10 2.4E-14 106.2 4.0 104 29-138 117-225 (381)
128 1xdw_A NAD+-dependent (R)-2-hy 98.9 1.7E-09 6E-14 102.0 6.4 104 28-137 143-248 (331)
129 2o4c_A Erythronate-4-phosphate 98.9 6.4E-10 2.2E-14 106.6 3.2 103 29-138 114-222 (380)
130 3d4o_A Dipicolinate synthase s 98.8 5.2E-09 1.8E-13 96.9 8.5 93 28-125 152-246 (293)
131 2rir_A Dipicolinate synthase, 98.8 8.5E-09 2.9E-13 95.7 9.4 93 28-125 154-248 (300)
132 3oj0_A Glutr, glutamyl-tRNA re 98.8 3.5E-09 1.2E-13 87.4 5.7 88 31-124 21-111 (144)
133 2duw_A Putative COA-binding pr 98.8 8.5E-09 2.9E-13 85.7 7.7 104 31-145 13-122 (145)
134 3ic5_A Putative saccharopine d 98.8 9.9E-09 3.4E-13 80.7 7.7 91 30-125 4-102 (118)
135 1lss_A TRK system potassium up 98.8 1.7E-08 6E-13 81.7 8.5 94 30-125 3-105 (140)
136 2ewd_A Lactate dehydrogenase,; 98.8 3.1E-08 1.1E-12 92.6 10.6 112 31-146 4-145 (317)
137 3kb6_A D-lactate dehydrogenase 98.7 1.3E-08 4.6E-13 96.0 7.2 108 28-139 138-246 (334)
138 1hyh_A L-hicdh, L-2-hydroxyiso 98.7 4.8E-08 1.6E-12 91.0 10.8 90 31-124 1-123 (309)
139 1v8b_A Adenosylhomocysteinase; 98.7 1.8E-08 6E-13 99.1 7.6 101 28-135 254-357 (479)
140 3d64_A Adenosylhomocysteinase; 98.6 2.2E-08 7.4E-13 98.8 6.1 92 29-127 275-368 (494)
141 1a5z_A L-lactate dehydrogenase 98.6 7.5E-08 2.6E-12 90.2 9.4 89 32-124 1-117 (319)
142 1lld_A L-lactate dehydrogenase 98.6 7.9E-08 2.7E-12 89.6 9.4 91 30-124 6-125 (319)
143 3u62_A Shikimate dehydrogenase 98.6 6.1E-09 2.1E-13 94.5 1.6 115 30-150 108-225 (253)
144 2g1u_A Hypothetical protein TM 98.6 1.1E-07 3.9E-12 79.2 8.9 94 30-124 18-120 (155)
145 2dc1_A L-aspartate dehydrogena 98.6 1E-07 3.6E-12 85.2 9.0 82 32-125 1-83 (236)
146 3llv_A Exopolyphosphatase-rela 98.6 1.1E-07 3.8E-12 77.7 8.5 94 30-124 5-105 (141)
147 3h9u_A Adenosylhomocysteinase; 98.6 6.2E-08 2.1E-12 93.8 7.7 101 29-135 209-311 (436)
148 3p2y_A Alanine dehydrogenase/p 98.6 4E-08 1.4E-12 93.9 6.2 89 30-124 183-303 (381)
149 2hjr_A Malate dehydrogenase; m 98.6 2.3E-07 7.9E-12 87.2 11.2 91 30-124 13-132 (328)
150 3c85_A Putative glutathione-re 98.6 1.6E-07 5.5E-12 80.2 9.3 72 29-101 37-118 (183)
151 2b0j_A 5,10-methenyltetrahydro 98.6 4.2E-06 1.4E-10 75.7 18.5 116 74-202 128-245 (358)
152 3fwz_A Inner membrane protein 98.6 1.5E-07 5E-12 77.2 8.5 73 30-102 6-85 (140)
153 1pzg_A LDH, lactate dehydrogen 98.6 2.1E-07 7.1E-12 87.7 10.4 92 30-124 8-133 (331)
154 3uuw_A Putative oxidoreductase 98.6 9.2E-08 3.1E-12 88.7 7.6 80 28-108 3-86 (308)
155 2v6b_A L-LDH, L-lactate dehydr 98.6 2.4E-07 8.4E-12 86.1 10.3 110 32-146 1-138 (304)
156 1guz_A Malate dehydrogenase; o 98.5 4.7E-07 1.6E-11 84.4 11.9 89 32-124 1-119 (310)
157 3q2i_A Dehydrogenase; rossmann 98.5 9.9E-08 3.4E-12 90.3 7.4 82 27-108 9-95 (354)
158 3e18_A Oxidoreductase; dehydro 98.5 1.3E-07 4.4E-12 89.9 8.1 80 29-108 3-85 (359)
159 3hdj_A Probable ornithine cycl 98.5 3.8E-07 1.3E-11 85.2 10.7 91 29-127 119-217 (313)
160 4dio_A NAD(P) transhydrogenase 98.5 1E-07 3.5E-12 91.8 6.8 89 30-124 189-313 (405)
161 1tlt_A Putative oxidoreductase 98.5 3.4E-07 1.2E-11 85.3 10.3 88 29-121 3-95 (319)
162 4hkt_A Inositol 2-dehydrogenas 98.5 2.9E-07 9.9E-12 86.2 9.4 76 31-108 3-83 (331)
163 1x7d_A Ornithine cyclodeaminas 98.5 8.6E-08 3E-12 91.0 5.6 95 29-127 127-230 (350)
164 3euw_A MYO-inositol dehydrogen 98.5 3E-07 1E-11 86.6 9.2 78 30-108 3-85 (344)
165 3don_A Shikimate dehydrogenase 98.5 4.3E-08 1.5E-12 90.1 2.9 95 30-126 116-213 (277)
166 1ldn_A L-lactate dehydrogenase 98.5 3.5E-08 1.2E-12 92.4 2.3 71 29-100 4-86 (316)
167 3e9m_A Oxidoreductase, GFO/IDH 98.5 2.9E-07 1E-11 86.3 8.6 79 29-108 3-87 (330)
168 3rc1_A Sugar 3-ketoreductase; 98.5 3E-07 1E-11 87.1 8.4 82 27-108 23-109 (350)
169 3ec7_A Putative dehydrogenase; 98.5 3.1E-07 1.1E-11 87.2 8.5 85 24-108 16-107 (357)
170 2d59_A Hypothetical protein PH 98.5 8.7E-07 3E-11 73.3 10.0 104 31-145 22-129 (144)
171 2z2v_A Hypothetical protein PH 98.4 1.6E-07 5.4E-12 89.7 5.9 91 29-125 14-110 (365)
172 3bio_A Oxidoreductase, GFO/IDH 98.4 8.2E-07 2.8E-11 82.5 10.5 226 29-278 7-276 (304)
173 1iuk_A Hypothetical protein TT 98.4 5.8E-07 2E-11 74.1 7.8 106 31-145 13-122 (140)
174 3n58_A Adenosylhomocysteinase; 98.4 7.9E-07 2.7E-11 86.2 9.9 91 29-126 245-337 (464)
175 2hmt_A YUAA protein; RCK, KTN, 98.4 3E-07 1E-11 74.6 6.0 92 30-124 5-106 (144)
176 1t2d_A LDH-P, L-lactate dehydr 98.4 1.3E-06 4.3E-11 82.0 11.0 90 31-124 4-127 (322)
177 3phh_A Shikimate dehydrogenase 98.4 2.3E-07 7.8E-12 84.8 5.1 91 31-126 118-212 (269)
178 3gvp_A Adenosylhomocysteinase 98.4 3.3E-07 1.1E-11 88.5 6.3 92 29-127 218-311 (435)
179 3evn_A Oxidoreductase, GFO/IDH 98.4 7E-07 2.4E-11 83.6 8.3 79 29-108 3-87 (329)
180 3ezy_A Dehydrogenase; structur 98.4 4.6E-07 1.6E-11 85.3 6.9 77 31-108 2-84 (344)
181 2vhw_A Alanine dehydrogenase; 98.4 7E-07 2.4E-11 85.5 8.1 91 28-124 165-269 (377)
182 3ulk_A Ketol-acid reductoisome 98.4 2E-06 6.9E-11 82.8 11.1 164 28-200 34-210 (491)
183 3db2_A Putative NADPH-dependen 98.4 4.7E-07 1.6E-11 85.6 6.7 80 29-108 3-86 (354)
184 2i6t_A Ubiquitin-conjugating e 98.3 1.6E-06 5.5E-11 80.6 10.0 112 30-146 13-149 (303)
185 3abi_A Putative uncharacterize 98.3 5.2E-07 1.8E-11 85.8 6.8 90 29-124 14-109 (365)
186 3p7m_A Malate dehydrogenase; p 98.3 4.2E-06 1.4E-10 78.4 12.6 93 28-124 2-123 (321)
187 3cea_A MYO-inositol 2-dehydrog 98.3 8.7E-07 3E-11 83.3 7.9 80 29-108 6-91 (346)
188 3mz0_A Inositol 2-dehydrogenas 98.3 9E-07 3.1E-11 83.3 7.9 78 31-108 2-86 (344)
189 3l4b_C TRKA K+ channel protien 98.3 8.7E-07 3E-11 77.9 7.3 90 32-122 1-99 (218)
190 1x13_A NAD(P) transhydrogenase 98.3 4.3E-07 1.5E-11 87.7 5.7 89 30-124 171-293 (401)
191 2glx_A 1,5-anhydro-D-fructose 98.3 1.3E-06 4.6E-11 81.5 8.8 77 32-108 1-82 (332)
192 1ur5_A Malate dehydrogenase; o 98.3 5.1E-06 1.7E-10 77.4 12.6 90 31-124 2-120 (309)
193 3qy9_A DHPR, dihydrodipicolina 98.3 4.6E-06 1.6E-10 75.1 11.8 71 29-106 1-72 (243)
194 1xea_A Oxidoreductase, GFO/IDH 98.3 1.3E-06 4.5E-11 81.5 8.5 78 31-108 2-83 (323)
195 1obb_A Maltase, alpha-glucosid 98.3 1.2E-06 4.2E-11 86.2 8.5 71 29-100 1-89 (480)
196 3c1a_A Putative oxidoreductase 98.3 3.4E-07 1.2E-11 85.2 4.2 88 29-121 8-99 (315)
197 3fef_A Putative glucosidase LP 98.3 1E-06 3.5E-11 86.1 7.7 70 29-100 3-87 (450)
198 1omo_A Alanine dehydrogenase; 98.3 2.6E-06 8.9E-11 79.8 10.1 91 29-127 123-221 (322)
199 2egg_A AROE, shikimate 5-dehyd 98.3 5.9E-07 2E-11 83.3 5.6 96 29-125 139-242 (297)
200 1l7d_A Nicotinamide nucleotide 98.3 1.2E-06 4E-11 84.1 7.8 89 30-124 171-295 (384)
201 1id1_A Putative potassium chan 98.3 3E-06 1E-10 70.2 9.2 95 29-125 1-108 (153)
202 1y6j_A L-lactate dehydrogenase 98.3 3.9E-06 1.3E-10 78.5 10.7 91 30-123 6-123 (318)
203 1u8x_X Maltose-6'-phosphate gl 98.3 1.5E-06 5.2E-11 85.5 8.1 112 31-146 28-193 (472)
204 3pqe_A L-LDH, L-lactate dehydr 98.3 4E-06 1.4E-10 78.7 10.6 93 29-124 3-123 (326)
205 2ho3_A Oxidoreductase, GFO/IDH 98.3 1.6E-06 5.6E-11 80.8 7.8 78 31-108 1-82 (325)
206 3gvi_A Malate dehydrogenase; N 98.3 5.5E-06 1.9E-10 77.7 11.3 92 29-124 5-125 (324)
207 3d0o_A L-LDH 1, L-lactate dehy 98.2 5.4E-06 1.9E-10 77.4 11.0 94 28-124 3-124 (317)
208 2eez_A Alanine dehydrogenase; 98.2 2E-06 6.9E-11 82.0 8.2 95 29-125 164-268 (369)
209 2p2s_A Putative oxidoreductase 98.2 2.8E-06 9.6E-11 79.6 9.0 80 29-108 2-86 (336)
210 3m2t_A Probable dehydrogenase; 98.2 1.3E-06 4.4E-11 83.0 6.3 80 29-108 3-88 (359)
211 1f06_A MESO-diaminopimelate D- 98.2 2.9E-06 1E-10 79.3 8.6 86 29-122 1-88 (320)
212 1oju_A MDH, malate dehydrogena 98.2 5.9E-06 2E-10 76.4 10.5 89 32-124 1-119 (294)
213 3o8q_A Shikimate 5-dehydrogena 98.2 1.5E-06 5.1E-11 79.9 5.5 95 29-125 124-223 (281)
214 1h6d_A Precursor form of gluco 98.2 2.4E-06 8.1E-11 83.3 7.1 84 25-108 77-170 (433)
215 4had_A Probable oxidoreductase 98.2 3.4E-06 1.2E-10 79.4 7.8 80 29-108 21-106 (350)
216 3ohs_X Trans-1,2-dihydrobenzen 98.2 2.7E-06 9.1E-11 79.8 7.0 78 31-108 2-86 (334)
217 3tl2_A Malate dehydrogenase; c 98.1 6.9E-06 2.4E-10 76.7 9.3 92 29-124 6-128 (315)
218 1gpj_A Glutamyl-tRNA reductase 98.1 3.7E-06 1.2E-10 81.2 7.5 71 29-100 165-239 (404)
219 3btv_A Galactose/lactose metab 98.1 3.2E-06 1.1E-10 82.4 7.1 80 29-108 18-109 (438)
220 4fb5_A Probable oxidoreductase 98.1 7.1E-06 2.4E-10 77.8 9.4 82 27-108 21-114 (393)
221 1ydw_A AX110P-like protein; st 98.1 5.7E-06 1.9E-10 78.4 8.5 80 29-108 4-91 (362)
222 2zqz_A L-LDH, L-lactate dehydr 98.1 1.1E-05 3.8E-10 75.7 10.1 72 27-99 5-87 (326)
223 3nep_X Malate dehydrogenase; h 98.1 1.9E-05 6.4E-10 73.7 11.1 90 32-124 1-119 (314)
224 2d4a_B Malate dehydrogenase; a 98.1 1.4E-05 4.9E-10 74.3 10.1 88 33-124 1-117 (308)
225 3l9w_A Glutathione-regulated p 98.1 7.7E-06 2.6E-10 79.2 8.5 93 30-123 3-103 (413)
226 1p77_A Shikimate 5-dehydrogena 98.1 1.9E-06 6.4E-11 78.8 3.7 96 29-126 117-217 (272)
227 3vku_A L-LDH, L-lactate dehydr 98.1 9.4E-06 3.2E-10 76.1 8.5 95 27-124 5-126 (326)
228 1nyt_A Shikimate 5-dehydrogena 98.0 9.3E-06 3.2E-10 74.0 8.2 97 29-126 117-217 (271)
229 3f4l_A Putative oxidoreductase 98.0 4.7E-06 1.6E-10 78.4 6.3 77 31-108 2-85 (345)
230 3fhl_A Putative oxidoreductase 98.0 7.5E-06 2.6E-10 77.6 7.6 78 29-108 3-85 (362)
231 3dty_A Oxidoreductase, GFO/IDH 98.0 5E-06 1.7E-10 79.9 6.2 81 28-108 9-105 (398)
232 1ff9_A Saccharopine reductase; 98.0 5.9E-06 2E-10 80.9 6.8 91 29-124 1-100 (450)
233 3e82_A Putative oxidoreductase 98.0 8.6E-06 2.9E-10 77.3 7.8 78 30-108 6-87 (364)
234 3i23_A Oxidoreductase, GFO/IDH 98.0 1E-05 3.5E-10 76.3 8.1 77 31-108 2-85 (349)
235 3pwz_A Shikimate dehydrogenase 98.0 8.7E-06 3E-10 74.4 7.3 95 30-125 119-217 (272)
236 1ez4_A Lactate dehydrogenase; 98.0 1.3E-05 4.5E-10 74.9 8.6 92 30-124 4-122 (318)
237 3jyo_A Quinate/shikimate dehyd 98.0 1.5E-05 5.1E-10 73.3 8.9 106 29-135 125-243 (283)
238 3kux_A Putative oxidoreductase 98.0 8E-06 2.7E-10 77.1 7.1 78 30-108 6-87 (352)
239 3v5n_A Oxidoreductase; structu 98.0 6.1E-06 2.1E-10 79.9 6.4 80 29-108 35-130 (417)
240 2aef_A Calcium-gated potassium 98.0 9.1E-06 3.1E-10 72.0 7.0 92 30-125 8-108 (234)
241 1pjc_A Protein (L-alanine dehy 98.0 9.5E-06 3.2E-10 77.1 7.4 90 30-125 166-269 (361)
242 2nvw_A Galactose/lactose metab 98.0 1.6E-05 5.3E-10 78.5 9.2 84 25-108 33-128 (479)
243 1zh8_A Oxidoreductase; TM0312, 98.0 1E-05 3.5E-10 76.1 6.9 81 28-108 15-102 (340)
244 3gdo_A Uncharacterized oxidore 98.0 9.9E-06 3.4E-10 76.7 6.8 78 29-108 3-85 (358)
245 1s6y_A 6-phospho-beta-glucosid 98.0 1.5E-05 5.1E-10 78.0 8.2 69 31-100 7-95 (450)
246 2ixa_A Alpha-N-acetylgalactosa 98.0 1.5E-05 5E-10 77.8 8.1 82 27-108 16-111 (444)
247 3moi_A Probable dehydrogenase; 98.0 9.4E-06 3.2E-10 77.7 6.5 78 31-108 2-84 (387)
248 3u3x_A Oxidoreductase; structu 97.9 1.6E-05 5.4E-10 75.5 8.0 80 29-108 24-108 (361)
249 3ldh_A Lactate dehydrogenase; 97.9 1.7E-05 5.9E-10 74.4 8.0 91 30-124 20-139 (330)
250 4gqa_A NAD binding oxidoreduct 97.9 9.5E-06 3.3E-10 78.2 6.4 79 30-108 25-116 (412)
251 2axq_A Saccharopine dehydrogen 97.9 1E-05 3.5E-10 79.5 6.3 90 30-124 22-120 (467)
252 4ew6_A D-galactose-1-dehydroge 97.9 1.8E-05 6E-10 74.2 7.6 75 28-108 22-101 (330)
253 3oa2_A WBPB; oxidoreductase, s 97.9 2.8E-05 9.6E-10 72.5 8.9 79 30-108 2-93 (318)
254 1nvm_B Acetaldehyde dehydrogen 97.9 2.1E-05 7.1E-10 73.3 8.0 93 30-124 3-105 (312)
255 1npy_A Hypothetical shikimate 97.9 5.8E-06 2E-10 75.6 3.8 92 30-125 118-215 (271)
256 3o9z_A Lipopolysaccaride biosy 97.9 3.6E-05 1.2E-09 71.5 9.1 79 30-108 2-92 (312)
257 2xxj_A L-LDH, L-lactate dehydr 97.9 3.5E-05 1.2E-09 71.8 8.9 90 32-124 1-117 (310)
258 3ond_A Adenosylhomocysteinase; 97.9 4.7E-05 1.6E-09 74.8 10.1 90 29-125 263-354 (488)
259 3ff4_A Uncharacterized protein 97.9 3.3E-05 1.1E-09 62.0 7.2 104 30-145 3-110 (122)
260 2x0j_A Malate dehydrogenase; o 97.8 6.2E-05 2.1E-09 69.5 9.9 89 32-124 1-119 (294)
261 4h3v_A Oxidoreductase domain p 97.8 1.4E-05 4.7E-10 75.8 5.6 81 28-108 3-95 (390)
262 2vt3_A REX, redox-sensing tran 97.8 8.5E-06 2.9E-10 71.9 3.7 79 29-108 83-165 (215)
263 4f3y_A DHPR, dihydrodipicolina 97.8 3.8E-05 1.3E-09 70.1 8.0 79 29-108 5-93 (272)
264 2nu8_A Succinyl-COA ligase [AD 97.8 6.2E-05 2.1E-09 69.3 9.3 76 30-109 6-85 (288)
265 4g65_A TRK system potassium up 97.8 1.3E-05 4.5E-10 78.7 4.6 78 30-107 2-87 (461)
266 1edz_A 5,10-methylenetetrahydr 97.8 1.8E-05 6.3E-10 73.7 5.2 92 28-125 174-277 (320)
267 4gmf_A Yersiniabactin biosynth 97.8 1.6E-05 5.4E-10 75.9 4.9 70 30-101 6-79 (372)
268 3fbt_A Chorismate mutase and s 97.8 1.6E-05 5.5E-10 73.0 4.7 116 29-150 120-240 (282)
269 3ngx_A Bifunctional protein fo 97.8 6.4E-05 2.2E-09 68.4 8.6 76 29-125 148-224 (276)
270 4a26_A Putative C-1-tetrahydro 97.8 7.7E-05 2.6E-09 68.7 8.9 78 29-125 163-241 (300)
271 1smk_A Malate dehydrogenase, g 97.7 5.5E-05 1.9E-09 70.8 7.9 66 30-97 7-85 (326)
272 3oqb_A Oxidoreductase; structu 97.7 3.8E-05 1.3E-09 73.1 6.8 80 29-108 4-103 (383)
273 1b7g_O Protein (glyceraldehyde 97.7 0.00011 3.6E-09 69.4 9.6 89 32-125 2-110 (340)
274 3tnl_A Shikimate dehydrogenase 97.7 5.1E-05 1.7E-09 70.8 7.2 106 29-135 152-277 (315)
275 2czc_A Glyceraldehyde-3-phosph 97.7 0.00012 4E-09 68.8 9.6 75 31-106 2-97 (334)
276 4aj2_A L-lactate dehydrogenase 97.7 8.7E-05 3E-09 69.6 8.7 92 29-124 17-137 (331)
277 3l07_A Bifunctional protein fo 97.7 0.00013 4.5E-09 66.7 9.5 76 29-125 159-235 (285)
278 1b0a_A Protein (fold bifunctio 97.7 9.9E-05 3.4E-09 67.6 8.7 76 29-125 157-233 (288)
279 1a4i_A Methylenetetrahydrofola 97.7 0.00015 5.2E-09 66.7 9.9 76 29-125 163-239 (301)
280 3p2o_A Bifunctional protein fo 97.7 0.00015 5.1E-09 66.3 9.7 76 29-125 158-234 (285)
281 3t4e_A Quinate/shikimate dehyd 97.7 7.3E-05 2.5E-09 69.6 7.8 117 29-149 146-282 (312)
282 1leh_A Leucine dehydrogenase; 97.7 4.9E-05 1.7E-09 72.3 6.7 70 28-98 170-240 (364)
283 1cf2_P Protein (glyceraldehyde 97.7 6.6E-05 2.2E-09 70.7 7.3 91 31-126 1-112 (337)
284 1lc0_A Biliverdin reductase A; 97.7 3.6E-05 1.2E-09 70.9 5.3 85 28-121 4-95 (294)
285 4ina_A Saccharopine dehydrogen 97.7 4.6E-05 1.6E-09 73.5 6.1 89 31-124 1-108 (405)
286 1mld_A Malate dehydrogenase; o 97.7 9.5E-05 3.3E-09 68.9 8.0 88 32-123 1-117 (314)
287 2c2x_A Methylenetetrahydrofola 97.7 0.00015 5.2E-09 66.1 9.1 77 28-125 155-234 (281)
288 1oi7_A Succinyl-COA synthetase 97.7 0.00012 4E-09 67.4 8.5 76 30-109 6-85 (288)
289 3ius_A Uncharacterized conserv 97.7 7.1E-05 2.4E-09 67.6 7.0 66 30-98 4-73 (286)
290 3fi9_A Malate dehydrogenase; s 97.6 8.6E-05 3E-09 70.0 7.2 68 28-96 5-84 (343)
291 3ijp_A DHPR, dihydrodipicolina 97.6 0.00013 4.5E-09 67.0 8.1 83 25-108 15-108 (288)
292 3dr3_A N-acetyl-gamma-glutamyl 97.6 0.00011 3.8E-09 69.1 7.6 90 31-125 4-108 (337)
293 4a5o_A Bifunctional protein fo 97.6 0.00024 8.3E-09 64.9 9.5 76 29-125 159-235 (286)
294 1ys4_A Aspartate-semialdehyde 97.6 0.00016 5.4E-09 68.5 8.4 90 31-125 8-116 (354)
295 3ip3_A Oxidoreductase, putativ 97.6 3.6E-05 1.2E-09 72.1 3.8 77 31-108 2-87 (337)
296 3e8x_A Putative NAD-dependent 97.6 0.00021 7E-09 62.9 8.4 71 27-98 17-94 (236)
297 1dih_A Dihydrodipicolinate red 97.5 0.00013 4.3E-09 66.7 7.0 79 29-108 3-92 (273)
298 1nvt_A Shikimate 5'-dehydrogen 97.5 4.4E-05 1.5E-09 70.1 3.9 95 29-125 126-232 (287)
299 3qvo_A NMRA family protein; st 97.5 5.2E-05 1.8E-09 67.0 4.0 71 29-100 21-100 (236)
300 2nqt_A N-acetyl-gamma-glutamyl 97.5 0.00014 4.9E-09 68.7 6.9 91 29-126 7-113 (352)
301 1xyg_A Putative N-acetyl-gamma 97.5 0.0003 1E-08 66.7 9.0 90 29-125 14-114 (359)
302 2dt5_A AT-rich DNA-binding pro 97.5 3E-05 1E-09 68.2 1.9 80 28-108 77-160 (211)
303 2fp4_A Succinyl-COA ligase [GD 97.5 0.00034 1.2E-08 64.9 9.0 77 30-109 12-92 (305)
304 3keo_A Redox-sensing transcrip 97.5 5.4E-05 1.8E-09 66.5 3.1 82 27-108 80-168 (212)
305 2ozp_A N-acetyl-gamma-glutamyl 97.4 0.00026 9E-09 66.7 7.8 90 30-125 3-101 (345)
306 2yyy_A Glyceraldehyde-3-phosph 97.4 0.0007 2.4E-08 63.8 10.6 91 31-125 2-115 (343)
307 1c1d_A L-phenylalanine dehydro 97.4 0.00032 1.1E-08 66.3 8.1 90 29-125 173-263 (355)
308 1jw9_B Molybdopterin biosynthe 97.4 0.00024 8.3E-09 63.8 6.6 35 30-64 30-65 (249)
309 3upl_A Oxidoreductase; rossman 97.4 0.00025 8.6E-09 69.0 7.1 72 28-99 20-118 (446)
310 1o6z_A MDH, malate dehydrogena 97.4 0.00096 3.3E-08 61.7 10.6 65 32-97 1-79 (303)
311 2yv1_A Succinyl-COA ligase [AD 97.4 0.00048 1.6E-08 63.5 8.4 77 30-109 12-91 (294)
312 3ew7_A LMO0794 protein; Q8Y8U8 97.3 0.00092 3.1E-08 57.5 9.7 65 32-98 1-71 (221)
313 1j5p_A Aspartate dehydrogenase 97.3 0.00033 1.1E-08 63.1 6.8 80 30-123 11-91 (253)
314 1u8f_O GAPDH, glyceraldehyde-3 97.3 0.00046 1.6E-08 64.8 8.1 90 31-124 3-123 (335)
315 3hhp_A Malate dehydrogenase; M 97.3 0.0013 4.3E-08 61.2 10.9 90 32-124 1-119 (312)
316 3eag_A UDP-N-acetylmuramate:L- 97.3 0.0006 2.1E-08 63.6 8.7 66 31-96 4-74 (326)
317 3hsk_A Aspartate-semialdehyde 97.3 0.0004 1.4E-08 66.3 7.6 94 26-125 14-126 (381)
318 3dfz_A SIRC, precorrin-2 dehyd 97.3 0.0012 4.1E-08 58.4 10.0 89 28-123 28-121 (223)
319 3h2s_A Putative NADH-flavin re 97.3 0.00075 2.6E-08 58.4 8.7 66 32-98 1-72 (224)
320 3mtj_A Homoserine dehydrogenas 97.3 0.00051 1.8E-08 66.9 8.1 77 29-106 8-97 (444)
321 3gpi_A NAD-dependent epimerase 97.3 0.00022 7.5E-09 64.5 4.8 64 29-97 1-72 (286)
322 2r00_A Aspartate-semialdehyde 97.2 0.00016 5.5E-09 68.0 3.8 89 30-125 2-98 (336)
323 3cps_A Glyceraldehyde 3-phosph 97.2 0.0007 2.4E-08 64.0 8.0 95 26-124 12-139 (354)
324 2yv2_A Succinyl-COA synthetase 97.2 0.00098 3.4E-08 61.5 8.8 77 30-109 12-92 (297)
325 3tum_A Shikimate dehydrogenase 97.2 0.00052 1.8E-08 62.5 6.7 104 29-135 123-239 (269)
326 1b8p_A Protein (malate dehydro 97.2 0.00056 1.9E-08 64.0 6.9 93 30-124 4-134 (329)
327 2ep5_A 350AA long hypothetical 97.2 0.00082 2.8E-08 63.4 8.1 90 30-125 3-110 (350)
328 1hdo_A Biliverdin IX beta redu 97.2 0.00037 1.3E-08 59.3 5.0 67 31-98 3-77 (206)
329 1vl6_A Malate oxidoreductase; 97.1 0.003 1E-07 60.1 11.5 90 29-124 190-295 (388)
330 3two_A Mannitol dehydrogenase; 97.1 0.002 7E-08 60.2 10.3 91 29-125 175-267 (348)
331 2hjs_A USG-1 protein homolog; 97.1 0.00034 1.2E-08 65.8 4.8 88 31-125 6-101 (340)
332 1lnq_A MTHK channels, potassiu 97.1 0.00043 1.5E-08 64.6 5.3 91 31-124 115-213 (336)
333 3e5r_O PP38, glyceraldehyde-3- 97.1 0.00038 1.3E-08 65.4 4.8 90 31-124 3-127 (337)
334 1p9l_A Dihydrodipicolinate red 97.1 0.003 1E-07 56.6 10.4 62 32-108 1-65 (245)
335 3lk7_A UDP-N-acetylmuramoylala 97.1 0.00085 2.9E-08 65.4 7.3 67 29-96 7-80 (451)
336 3dhn_A NAD-dependent epimerase 97.1 0.00044 1.5E-08 60.1 4.5 67 31-99 4-78 (227)
337 2ph5_A Homospermidine synthase 97.0 0.00085 2.9E-08 65.6 6.9 89 31-124 13-115 (480)
338 2d8a_A PH0655, probable L-thre 97.0 0.0014 4.7E-08 61.4 7.9 91 30-125 167-269 (348)
339 4dpk_A Malonyl-COA/succinyl-CO 97.0 0.00065 2.2E-08 64.4 5.6 90 30-125 6-112 (359)
340 4dpl_A Malonyl-COA/succinyl-CO 97.0 0.00065 2.2E-08 64.4 5.6 90 30-125 6-112 (359)
341 1vkn_A N-acetyl-gamma-glutamyl 97.0 0.0025 8.5E-08 60.1 9.3 89 30-125 12-109 (351)
342 3u95_A Glycoside hydrolase, fa 97.0 0.00063 2.1E-08 66.9 5.4 64 32-96 1-84 (477)
343 3c8m_A Homoserine dehydrogenas 97.0 0.00066 2.2E-08 63.6 5.2 89 29-121 4-119 (331)
344 3i6i_A Putative leucoanthocyan 97.0 0.0013 4.4E-08 61.2 7.3 79 29-108 8-106 (346)
345 1t4b_A Aspartate-semialdehyde 96.9 0.00098 3.3E-08 63.4 6.2 89 31-125 1-100 (367)
346 3r6d_A NAD-dependent epimerase 96.9 0.0008 2.7E-08 58.4 5.2 66 32-98 6-83 (221)
347 3pwk_A Aspartate-semialdehyde 96.9 0.00058 2E-08 64.9 4.3 88 31-125 2-97 (366)
348 3do5_A HOM, homoserine dehydro 96.9 0.0017 5.9E-08 60.7 7.5 70 31-100 2-92 (327)
349 2ejw_A HDH, homoserine dehydro 96.9 0.00055 1.9E-08 64.2 3.7 83 30-121 2-96 (332)
350 3dqp_A Oxidoreductase YLBE; al 96.9 0.00051 1.7E-08 59.6 3.3 65 32-99 1-74 (219)
351 3slg_A PBGP3 protein; structur 96.8 0.0012 4.2E-08 61.8 5.9 70 27-97 20-100 (372)
352 1up7_A 6-phospho-beta-glucosid 96.8 0.0041 1.4E-07 60.1 9.5 67 31-98 2-83 (417)
353 2x4g_A Nucleoside-diphosphate- 96.8 0.0017 5.8E-08 59.8 6.6 67 30-97 12-86 (342)
354 1uuf_A YAHK, zinc-type alcohol 96.8 0.0036 1.2E-07 59.2 8.7 91 29-125 193-290 (369)
355 1qyc_A Phenylcoumaran benzylic 96.8 0.0021 7.3E-08 58.3 6.8 68 31-99 4-88 (308)
356 3uko_A Alcohol dehydrogenase c 96.7 0.0098 3.4E-07 56.2 11.4 91 29-124 192-296 (378)
357 3e48_A Putative nucleoside-dip 96.7 0.0012 4E-08 59.7 4.7 66 32-98 1-75 (289)
358 4h7p_A Malate dehydrogenase; s 96.7 0.0041 1.4E-07 58.5 8.4 67 29-96 22-108 (345)
359 3ing_A Homoserine dehydrogenas 96.7 0.0015 5.2E-08 61.0 5.4 93 29-122 2-116 (325)
360 1pqw_A Polyketide synthase; ro 96.7 0.0036 1.2E-07 53.4 7.4 91 29-124 37-138 (198)
361 1p0f_A NADP-dependent alcohol 96.7 0.011 3.7E-07 55.8 11.3 89 30-123 191-293 (373)
362 3uog_A Alcohol dehydrogenase; 96.7 0.0045 1.5E-07 58.3 8.7 90 30-124 189-288 (363)
363 1zud_1 Adenylyltransferase THI 96.7 0.0022 7.6E-08 57.5 6.0 35 30-64 27-62 (251)
364 3m2p_A UDP-N-acetylglucosamine 96.7 0.0031 1.1E-07 57.5 7.1 63 31-97 2-71 (311)
365 1e3i_A Alcohol dehydrogenase, 96.7 0.013 4.6E-07 55.2 11.7 90 30-124 195-298 (376)
366 1rjw_A ADH-HT, alcohol dehydro 96.7 0.0049 1.7E-07 57.4 8.5 92 29-125 163-263 (339)
367 1cdo_A Alcohol dehydrogenase; 96.6 0.015 5E-07 54.9 11.8 90 30-124 192-295 (374)
368 2jhf_A Alcohol dehydrogenase E 96.6 0.013 4.3E-07 55.3 11.3 89 30-123 191-293 (374)
369 2gas_A Isoflavone reductase; N 96.6 0.0021 7.2E-08 58.3 5.6 67 31-98 2-86 (307)
370 4hv4_A UDP-N-acetylmuramate--L 96.6 0.0032 1.1E-07 62.1 7.3 64 30-95 21-88 (494)
371 4gx0_A TRKA domain protein; me 96.6 0.0021 7E-08 64.3 5.9 91 32-124 349-444 (565)
372 1yqd_A Sinapyl alcohol dehydro 96.6 0.0057 2E-07 57.6 8.7 90 30-125 187-284 (366)
373 2wm3_A NMRA-like family domain 96.6 0.0047 1.6E-07 55.9 7.7 67 31-98 5-82 (299)
374 1piw_A Hypothetical zinc-type 96.6 0.0041 1.4E-07 58.4 7.5 92 29-125 178-278 (360)
375 2bka_A CC3, TAT-interacting pr 96.6 0.0023 7.9E-08 56.0 5.3 70 29-99 16-95 (242)
376 3c1o_A Eugenol synthase; pheny 96.6 0.0027 9.1E-08 58.2 5.9 78 30-108 3-100 (321)
377 2r6j_A Eugenol synthase 1; phe 96.6 0.0038 1.3E-07 57.1 6.9 67 32-99 12-90 (318)
378 1qyd_A Pinoresinol-lariciresin 96.5 0.0023 8E-08 58.2 5.3 67 31-98 4-86 (313)
379 1ebf_A Homoserine dehydrogenas 96.5 0.002 6.7E-08 61.0 4.9 54 30-85 3-62 (358)
380 2fzw_A Alcohol dehydrogenase c 96.5 0.014 4.7E-07 55.0 10.8 90 30-124 190-293 (373)
381 4b4u_A Bifunctional protein fo 96.5 0.0095 3.3E-07 54.7 9.2 76 29-125 177-253 (303)
382 1iz0_A Quinone oxidoreductase; 96.5 0.0061 2.1E-07 55.7 8.0 88 30-124 125-219 (302)
383 1pl8_A Human sorbitol dehydrog 96.5 0.0092 3.1E-07 55.9 9.4 91 29-124 170-274 (356)
384 3hn7_A UDP-N-acetylmuramate-L- 96.5 0.0058 2E-07 60.7 8.4 65 30-95 18-87 (524)
385 4hb9_A Similarities with proba 96.5 0.0028 9.5E-08 59.6 5.7 35 31-65 1-35 (412)
386 1y1p_A ARII, aldehyde reductas 96.5 0.0048 1.6E-07 56.6 7.1 38 29-66 9-47 (342)
387 2h6e_A ADH-4, D-arabinose 1-de 96.5 0.006 2E-07 56.9 7.9 90 30-124 170-270 (344)
388 3tz6_A Aspartate-semialdehyde 96.5 0.0027 9.4E-08 59.7 5.5 88 31-125 1-96 (344)
389 2cdc_A Glucose dehydrogenase g 96.5 0.0064 2.2E-07 57.2 8.1 89 31-124 181-279 (366)
390 2c5a_A GDP-mannose-3', 5'-epim 96.5 0.0038 1.3E-07 58.8 6.5 68 29-97 27-102 (379)
391 1xq6_A Unknown protein; struct 96.5 0.0036 1.2E-07 54.8 5.9 67 29-97 2-78 (253)
392 2dvm_A Malic enzyme, 439AA lon 96.5 0.014 4.7E-07 56.6 10.4 113 29-150 184-322 (439)
393 4b4o_A Epimerase family protei 96.5 0.0021 7.1E-08 58.4 4.3 58 32-96 1-59 (298)
394 3ruf_A WBGU; rossmann fold, UD 96.4 0.0051 1.8E-07 56.9 7.2 68 29-97 23-109 (351)
395 3ip1_A Alcohol dehydrogenase, 96.4 0.0092 3.2E-07 57.0 9.1 95 29-124 212-319 (404)
396 3s2e_A Zinc-containing alcohol 96.4 0.0069 2.4E-07 56.3 8.0 92 29-125 165-265 (340)
397 1kyq_A Met8P, siroheme biosynt 96.4 0.0037 1.3E-07 56.9 5.8 36 29-64 11-46 (274)
398 2hcy_A Alcohol dehydrogenase 1 96.4 0.017 5.7E-07 53.9 10.5 92 29-125 168-271 (347)
399 3uw3_A Aspartate-semialdehyde 96.4 0.0051 1.7E-07 58.6 6.7 90 30-125 3-103 (377)
400 4id9_A Short-chain dehydrogena 96.4 0.005 1.7E-07 56.9 6.6 64 27-97 15-86 (347)
401 1y7t_A Malate dehydrogenase; N 96.4 0.0036 1.2E-07 58.1 5.6 65 31-96 4-88 (327)
402 3pzr_A Aspartate-semialdehyde 96.4 0.0049 1.7E-07 58.5 6.5 88 32-125 1-99 (370)
403 1e3j_A NADP(H)-dependent ketos 96.4 0.012 4E-07 55.1 9.1 91 29-124 167-272 (352)
404 1hdg_O Holo-D-glyceraldehyde-3 96.4 0.0064 2.2E-07 56.9 7.2 89 32-124 1-123 (332)
405 1lu9_A Methylene tetrahydromet 96.4 0.0039 1.3E-07 56.8 5.6 69 29-98 117-198 (287)
406 3fpf_A Mtnas, putative unchara 96.3 0.0067 2.3E-07 55.9 7.1 91 29-120 121-219 (298)
407 3gms_A Putative NADPH:quinone 96.3 0.0097 3.3E-07 55.3 8.4 92 29-125 143-245 (340)
408 1xgk_A Nitrogen metabolite rep 96.3 0.0083 2.8E-07 56.2 7.9 68 30-98 4-83 (352)
409 3enk_A UDP-glucose 4-epimerase 96.3 0.007 2.4E-07 55.7 7.3 37 30-66 4-41 (341)
410 4ej6_A Putative zinc-binding d 96.3 0.0091 3.1E-07 56.4 8.2 91 29-124 181-285 (370)
411 3cmc_O GAPDH, glyceraldehyde-3 96.3 0.0046 1.6E-07 57.9 5.9 90 31-124 1-122 (334)
412 2pzm_A Putative nucleotide sug 96.3 0.0037 1.3E-07 57.7 5.1 70 27-97 16-97 (330)
413 3kkj_A Amine oxidase, flavin-c 96.3 0.0043 1.5E-07 53.2 5.2 34 32-65 3-36 (336)
414 3b1j_A Glyceraldehyde 3-phosph 96.3 0.004 1.4E-07 58.5 5.4 89 32-124 3-125 (339)
415 1v3u_A Leukotriene B4 12- hydr 96.3 0.014 4.8E-07 54.0 9.0 91 29-124 144-245 (333)
416 3jyn_A Quinone oxidoreductase; 96.3 0.0068 2.3E-07 56.0 6.7 92 29-125 139-241 (325)
417 3qwb_A Probable quinone oxidor 96.3 0.0092 3.1E-07 55.3 7.6 92 29-125 147-249 (334)
418 3fpc_A NADP-dependent alcohol 96.2 0.0082 2.8E-07 56.1 7.3 91 29-124 165-267 (352)
419 2jl1_A Triphenylmethane reduct 96.2 0.0037 1.3E-07 56.1 4.8 66 32-98 1-76 (287)
420 2cf5_A Atccad5, CAD, cinnamyl 96.2 0.012 3.9E-07 55.3 8.3 89 30-124 180-276 (357)
421 2ydy_A Methionine adenosyltran 96.2 0.0051 1.7E-07 56.0 5.7 65 31-97 2-69 (315)
422 2c0c_A Zinc binding alcohol de 96.2 0.01 3.4E-07 55.9 7.9 91 29-124 162-262 (362)
423 4eye_A Probable oxidoreductase 96.2 0.012 4.2E-07 54.7 8.3 91 29-124 158-258 (342)
424 1gad_O D-glyceraldehyde-3-phos 96.2 0.0068 2.3E-07 56.7 6.4 89 32-124 2-120 (330)
425 3h9e_O Glyceraldehyde-3-phosph 96.2 0.0089 3.1E-07 56.0 7.2 34 29-62 5-39 (346)
426 2d2i_A Glyceraldehyde 3-phosph 96.2 0.0063 2.1E-07 57.9 6.2 29 32-60 3-34 (380)
427 2x5j_O E4PDH, D-erythrose-4-ph 96.2 0.0052 1.8E-07 57.7 5.5 89 32-124 3-126 (339)
428 4a0s_A Octenoyl-COA reductase/ 96.2 0.018 6.3E-07 55.6 9.7 92 29-125 219-338 (447)
429 2rh8_A Anthocyanidin reductase 96.2 0.01 3.4E-07 54.6 7.4 65 31-96 9-88 (338)
430 2a9f_A Putative malic enzyme ( 96.2 0.014 4.9E-07 55.5 8.5 91 29-125 186-291 (398)
431 1e6u_A GDP-fucose synthetase; 96.2 0.0053 1.8E-07 56.0 5.4 60 30-97 2-64 (321)
432 2q1w_A Putative nucleotide sug 96.2 0.0052 1.8E-07 56.7 5.4 39 27-65 17-56 (333)
433 4egb_A DTDP-glucose 4,6-dehydr 96.1 0.0033 1.1E-07 58.1 3.9 43 22-64 15-60 (346)
434 5mdh_A Malate dehydrogenase; o 96.1 0.003 1E-07 59.2 3.6 65 31-96 3-87 (333)
435 2b5w_A Glucose dehydrogenase; 96.1 0.014 4.9E-07 54.6 8.2 88 32-124 174-274 (357)
436 7mdh_A Protein (malate dehydro 96.1 0.015 5.1E-07 55.2 8.3 66 30-96 31-116 (375)
437 2csu_A 457AA long hypothetical 96.1 0.009 3.1E-07 58.3 7.0 88 30-125 7-99 (457)
438 1sb8_A WBPP; epimerase, 4-epim 96.1 0.01 3.6E-07 54.9 7.2 70 28-98 24-112 (352)
439 1vj0_A Alcohol dehydrogenase, 96.1 0.014 4.7E-07 55.3 8.1 90 30-124 195-299 (380)
440 3goh_A Alcohol dehydrogenase, 96.1 0.0074 2.5E-07 55.5 6.0 89 29-124 141-230 (315)
441 3oh8_A Nucleoside-diphosphate 96.1 0.0064 2.2E-07 60.1 5.8 63 31-97 147-210 (516)
442 2j3h_A NADP-dependent oxidored 96.1 0.015 5.1E-07 54.0 8.1 91 29-124 154-256 (345)
443 1rm4_O Glyceraldehyde 3-phosph 96.0 0.0035 1.2E-07 58.8 3.5 89 32-124 2-123 (337)
444 4b7c_A Probable oxidoreductase 96.0 0.011 3.9E-07 54.7 7.1 92 29-125 148-250 (336)
445 2dph_A Formaldehyde dismutase; 96.0 0.017 5.8E-07 55.0 8.3 71 29-99 184-265 (398)
446 4dup_A Quinone oxidoreductase; 96.0 0.012 4.1E-07 55.1 7.1 90 30-124 167-266 (353)
447 3rui_A Ubiquitin-like modifier 96.0 0.012 4.1E-07 55.1 6.9 35 30-64 33-68 (340)
448 3jv7_A ADH-A; dehydrogenase, n 96.0 0.021 7.1E-07 53.1 8.6 91 29-124 170-271 (345)
449 2f00_A UDP-N-acetylmuramate--L 96.0 0.014 4.8E-07 57.4 7.7 65 30-96 18-86 (491)
450 1qor_A Quinone oxidoreductase; 96.0 0.012 4.1E-07 54.3 6.9 90 30-124 140-240 (327)
451 2q1s_A Putative nucleotide sug 95.9 0.0082 2.8E-07 56.4 5.7 69 29-98 30-109 (377)
452 1tt7_A YHFP; alcohol dehydroge 95.9 0.018 6.1E-07 53.2 7.9 87 33-124 153-248 (330)
453 2z1m_A GDP-D-mannose dehydrata 95.9 0.0091 3.1E-07 54.8 5.9 37 30-66 2-39 (345)
454 1xa0_A Putative NADPH dependen 95.9 0.017 5.9E-07 53.2 7.8 86 33-123 152-246 (328)
455 1f8f_A Benzyl alcohol dehydrog 95.9 0.013 4.3E-07 55.2 6.9 90 30-124 190-290 (371)
456 2gn4_A FLAA1 protein, UDP-GLCN 95.9 0.012 4E-07 54.9 6.6 68 29-97 19-100 (344)
457 1oc2_A DTDP-glucose 4,6-dehydr 95.9 0.011 3.8E-07 54.5 6.4 67 31-98 4-85 (348)
458 1yb5_A Quinone oxidoreductase; 95.9 0.014 4.7E-07 54.7 7.0 90 30-124 170-270 (351)
459 1p3d_A UDP-N-acetylmuramate--a 95.9 0.014 4.8E-07 57.1 7.3 65 30-96 17-85 (475)
460 3h8v_A Ubiquitin-like modifier 95.9 0.015 5.2E-07 53.3 7.1 36 29-64 34-70 (292)
461 3sc6_A DTDP-4-dehydrorhamnose 95.9 0.0054 1.8E-07 55.1 4.0 57 32-97 6-65 (287)
462 2x5o_A UDP-N-acetylmuramoylala 95.9 0.0085 2.9E-07 58.0 5.6 65 30-96 4-72 (439)
463 2o23_A HADH2 protein; HSD17B10 95.9 0.025 8.6E-07 50.0 8.3 40 29-68 10-50 (265)
464 2g82_O GAPDH, glyceraldehyde-3 95.8 0.0039 1.4E-07 58.3 2.9 89 32-124 1-120 (331)
465 1rkx_A CDP-glucose-4,6-dehydra 95.8 0.0088 3E-07 55.5 5.3 38 29-66 7-45 (357)
466 4gx0_A TRKA domain protein; me 95.8 0.014 4.9E-07 58.2 7.2 72 28-100 124-203 (565)
467 2qrj_A Saccharopine dehydrogen 95.8 0.0079 2.7E-07 57.4 5.0 78 30-124 213-301 (394)
468 2zcu_A Uncharacterized oxidore 95.8 0.0087 3E-07 53.5 5.1 65 33-98 1-75 (286)
469 3afn_B Carbonyl reductase; alp 95.8 0.019 6.5E-07 50.5 7.2 40 29-68 5-46 (258)
470 2c29_D Dihydroflavonol 4-reduc 95.8 0.019 6.4E-07 52.8 7.4 66 30-96 4-85 (337)
471 3nx4_A Putative oxidoreductase 95.8 0.015 5.3E-07 53.4 6.8 87 33-124 149-242 (324)
472 3rp8_A Flavoprotein monooxygen 95.8 0.0097 3.3E-07 56.4 5.5 39 27-65 19-57 (407)
473 2yy7_A L-threonine dehydrogena 95.8 0.011 3.9E-07 53.4 5.8 64 31-97 2-77 (312)
474 3fbg_A Putative arginate lyase 95.7 0.017 5.9E-07 53.8 7.0 90 30-124 150-249 (346)
475 2j8z_A Quinone oxidoreductase; 95.7 0.017 6E-07 54.0 7.1 90 30-124 162-262 (354)
476 1pjq_A CYSG, siroheme synthase 95.7 0.035 1.2E-06 54.1 9.4 70 29-100 10-84 (457)
477 2dkn_A 3-alpha-hydroxysteroid 95.7 0.0047 1.6E-07 54.2 2.9 35 32-66 2-37 (255)
478 2c20_A UDP-glucose 4-epimerase 95.7 0.0063 2.2E-07 55.7 3.9 66 31-97 1-76 (330)
479 3h5n_A MCCB protein; ubiquitin 95.7 0.022 7.4E-07 53.7 7.6 35 30-64 117-152 (353)
480 2hun_A 336AA long hypothetical 95.7 0.015 5.2E-07 53.3 6.4 69 29-98 1-85 (336)
481 2yv3_A Aspartate-semialdehyde 95.7 0.0043 1.5E-07 58.0 2.6 86 32-125 1-94 (331)
482 2dq4_A L-threonine 3-dehydroge 95.7 0.018 6.2E-07 53.5 7.0 89 30-124 164-263 (343)
483 3d7l_A LIN1944 protein; APC893 95.7 0.0074 2.5E-07 51.3 3.9 34 31-65 3-37 (202)
484 4gsl_A Ubiquitin-like modifier 95.7 0.016 5.6E-07 58.2 6.9 35 30-64 325-360 (615)
485 1vl0_A DTDP-4-dehydrorhamnose 95.7 0.011 3.7E-07 53.1 5.2 61 29-98 10-73 (292)
486 3ko8_A NAD-dependent epimerase 95.7 0.014 4.8E-07 52.9 6.0 64 32-97 1-71 (312)
487 3gaz_A Alcohol dehydrogenase s 95.6 0.019 6.6E-07 53.4 6.9 90 30-125 150-248 (343)
488 1hye_A L-lactate/malate dehydr 95.6 0.015 5E-07 53.8 6.0 64 32-96 1-82 (313)
489 1kol_A Formaldehyde dehydrogen 95.6 0.027 9.3E-07 53.4 8.1 48 29-76 184-232 (398)
490 2eih_A Alcohol dehydrogenase; 95.6 0.016 5.5E-07 53.9 6.3 90 30-124 166-266 (343)
491 3krt_A Crotonyl COA reductase; 95.6 0.018 6.1E-07 55.9 6.8 48 29-76 227-275 (456)
492 3rft_A Uronate dehydrogenase; 95.6 0.0042 1.4E-07 55.6 2.1 63 30-96 2-72 (267)
493 3sxp_A ADP-L-glycero-D-mannohe 95.6 0.021 7.2E-07 53.1 7.0 38 28-65 7-47 (362)
494 1yb1_A 17-beta-hydroxysteroid 95.6 0.022 7.6E-07 51.0 6.9 41 27-67 27-68 (272)
495 1wly_A CAAR, 2-haloacrylate re 95.6 0.015 5.2E-07 53.8 5.9 90 30-124 145-245 (333)
496 1yo6_A Putative carbonyl reduc 95.6 0.018 6.2E-07 50.2 6.2 41 30-70 2-45 (250)
497 4a2c_A Galactitol-1-phosphate 95.6 0.045 1.6E-06 50.6 9.2 92 29-125 159-262 (346)
498 3st7_A Capsular polysaccharide 95.6 0.01 3.5E-07 55.5 4.7 53 32-97 1-55 (369)
499 3pi7_A NADH oxidoreductase; gr 95.5 0.045 1.6E-06 50.9 9.0 88 32-124 166-264 (349)
500 3k5i_A Phosphoribosyl-aminoimi 95.5 0.019 6.6E-07 54.9 6.4 44 21-65 14-57 (403)
No 1
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=100.00 E-value=6.4e-46 Score=350.16 Aligned_cols=260 Identities=16% Similarity=0.187 Sum_probs=223.4
Q ss_pred ccCCCCCeEEEEcccHHHHHHHHHHHHcCC--eEEEEcCCCCcHHHHHhCCCc--eecChhh-HhhcCCCEEEEecCchh
Q 044593 26 YVKSTSLKIAVIGFGNFGQFLAKAFARHHH--TLLVHSRSDHSPAVRQQLNAP--FFADLND-LCELHPDVVLLSTSILS 100 (335)
Q Consensus 26 ~~~~~~~kI~IIG~G~mG~siA~~L~~~G~--~V~~~dr~~~~~~~a~~~g~~--~~~~~~~-~~~~~aDvVIlavp~~~ 100 (335)
+..+..|||+|||+|+||+++|..|++.|+ +|++|||+++..+.+.+.|+. ..+++.+ ++ .+||+||+|||+..
T Consensus 28 ~~~~~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~~~-~~aDvVilavp~~~ 106 (314)
T 3ggo_A 28 LKSLSMQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVED-FSPDFVMLSSPVRT 106 (314)
T ss_dssp -CCCSCSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGGGG-GCCSEEEECSCGGG
T ss_pred hhhcCCCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHHHHhh-ccCCEEEEeCCHHH
Confidence 344556899999999999999999999999 999999999888878888884 4567777 66 89999999999999
Q ss_pred HHHHHhhccccccCCccEEEEcCCCCchHHHHHHhhCCCCCceEeccccCCCCCc------ccccCCCcceecccccCCC
Q 044593 101 TQSVLKSIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQDFDILCTHPMFGPESA------KSSWENLPFMYDKVRIGND 174 (335)
Q Consensus 101 ~~~vl~~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~~~~~v~~HPmaG~~~~------~~~~~g~~~i~~~~~~~~~ 174 (335)
+.++++++. +.++++++|+|++|+|..+.+.+.+.++. +|+++|||+|++.+ .+.|.|.++++++ .+
T Consensus 107 ~~~vl~~l~-~~l~~~~iv~d~~Svk~~~~~~~~~~l~~--~~v~~hPm~G~e~sG~~~A~~~Lf~g~~~il~~----~~ 179 (314)
T 3ggo_A 107 FREIAKKLS-YILSEDATVTDQGSVKGKLVYDLENILGK--RFVGGHPIAGTEKSGVEYSLDNLYEGKKVILTP----TK 179 (314)
T ss_dssp HHHHHHHHH-HHSCTTCEEEECCSCCTHHHHHHHHHHGG--GEECEEECCCCCCCSGGGCCTTTTTTCEEEECC----CT
T ss_pred HHHHHHHHh-hccCCCcEEEECCCCcHHHHHHHHHhcCC--CEEecCcccCCcccchhhhhhhhhcCCEEEEEe----CC
Confidence 999999985 67899999999999999888888877654 79999999998863 1345677777753 34
Q ss_pred hhHHHHHHHHHHHHHhcCCEEEEeChHHHHHHHHHhhhhHHHHHHHHHHc----CC---CCCCCCCcchhhHHHHHHHhh
Q 044593 175 EERIKRVDKFLDVFAKEGCRMVEMSCFDHDKYAAGSQFVTHTMGRVLERF----GV---ESSPINTKGYETLLDLVDNTK 247 (335)
Q Consensus 175 ~~~~~~~~~v~~l~~~~G~~v~~~~~~eHD~~~A~~s~lph~la~aL~~~----~~---~~~~~~~~gf~~~~rl~~~ia 247 (335)
..+++.++.++++|+.+|++++++++++||+++|++||+||+++++|++. +. ....++++|||+++|| +
T Consensus 180 ~~~~~~~~~v~~l~~~~G~~v~~~~~~~hD~~~a~~s~lph~~a~~l~~~~~~~~~~~~~~~~~a~~~frd~tRi----a 255 (314)
T 3ggo_A 180 KTDKKRLKLVKRVWEDVGGVVEYMSPELHDYVFGVVSHLPHAVAFALVDTLIHMSTPEVDLFKYPGGGFKDFTRI----A 255 (314)
T ss_dssp TSCHHHHHHHHHHHHHTTCEEEECCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSCCGGGCCTTTTTTHHHH----T
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHhhccccHHHHHHH----h
Confidence 44567889999999999999999999999999999999999999888643 22 1235889999999998 8
Q ss_pred CCChHhHHHHHhhCHhH-HHHHHHHHHHHHHHHHHHHhhHHHHHHHHhccCc
Q 044593 248 GDSFDLYYGLFMYNKNS-LEQLQRLEMAFESIKQQLFGQMFRVYRKELFGSA 298 (335)
Q Consensus 248 ~~~~~lw~~I~~~N~~~-~~~l~~~~~~l~~l~~~l~~~~~~~~~~~~~~~~ 298 (335)
++||+||+|||..|+++ ++.|++|++.|+++++.|+++|.+.+.+ +|.++
T Consensus 256 ~~~p~~w~di~~~N~~~~~~~l~~~~~~l~~l~~~l~~~d~~~l~~-~~~~a 306 (314)
T 3ggo_A 256 KSDPIMWRDIFLENKENVMKAIEGFEKSLNHLKELIVREAEEELVE-YLKEV 306 (314)
T ss_dssp TSCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHTCSHHHHH-HHHHH
T ss_pred cCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHH-HHHHH
Confidence 99999999999999998 6999999999999999999999999887 56555
No 2
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=100.00 E-value=2.2e-46 Score=356.37 Aligned_cols=257 Identities=16% Similarity=0.190 Sum_probs=219.0
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhh---cCCCEEEEecCchhHHHHH
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCE---LHPDVVLLSTSILSTQSVL 105 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~---~~aDvVIlavp~~~~~~vl 105 (335)
...+||+|||+|+||+++|..|+++|++|++||++++..+.+.+.|+....++.+++. .++|+||+|||+..+.+++
T Consensus 6 ~~~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~~~~~a~~~G~~~~~~~~e~~~~a~~~aDlVilavP~~~~~~vl 85 (341)
T 3ktd_A 6 DISRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSRSGAKSAVDEGFDVSADLEATLQRAAAEDALIVLAVPMTAIDSLL 85 (341)
T ss_dssp CCSSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHTTCCEESCHHHHHHHHHHTTCEEEECSCHHHHHHHH
T ss_pred CCCCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeeeCCHHHHHHhcccCCCEEEEeCCHHHHHHHH
Confidence 3467999999999999999999999999999999998888788899977778776651 2579999999999999999
Q ss_pred hhccccccCCccEEEEcCCCCchHHHHHHhhCCCCCceEeccccCCCCC-c-----ccccCCCcceecccccCCChhHHH
Q 044593 106 KSIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQDFDILCTHPMFGPES-A-----KSSWENLPFMYDKVRIGNDEERIK 179 (335)
Q Consensus 106 ~~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~~~~~v~~HPmaG~~~-~-----~~~~~g~~~i~~~~~~~~~~~~~~ 179 (335)
+++. + ++++++|+|++|+|..+.+.+.+.++ +.+|+++|||+|++. + .+.|.|.++++++. +..+.+
T Consensus 86 ~~l~-~-~~~~~iv~Dv~Svk~~i~~~~~~~~~-~~~~v~~HPmaG~e~sG~~aa~~~Lf~g~~~iltp~----~~~~~e 158 (341)
T 3ktd_A 86 DAVH-T-HAPNNGFTDVVSVKTAVYDAVKARNM-QHRYVGSHPMAGTANSGWSASMDGLFKRAVWVVTFD----QLFDGT 158 (341)
T ss_dssp HHHH-H-HCTTCCEEECCSCSHHHHHHHHHTTC-GGGEECEEECCSCC-CCGGGCCSSTTTTCEEEECCG----GGTSSC
T ss_pred HHHH-c-cCCCCEEEEcCCCChHHHHHHHHhCC-CCcEecCCccccccccchhhhhhHHhcCCeEEEEeC----CCCChh
Confidence 9985 4 48999999999999998888887765 568999999999984 2 24567778888652 222233
Q ss_pred --------HHHHHHHHHHhcCCEEEEeChHHHHHHHHHhhhhHHHHHHHHHHcCCC----CCCCCCcchhhHHHHHHHhh
Q 044593 180 --------RVDKFLDVFAKEGCRMVEMSCFDHDKYAAGSQFVTHTMGRVLERFGVE----SSPINTKGYETLLDLVDNTK 247 (335)
Q Consensus 180 --------~~~~v~~l~~~~G~~v~~~~~~eHD~~~A~~s~lph~la~aL~~~~~~----~~~~~~~gf~~~~rl~~~ia 247 (335)
.++.++++|+.+|+++++|++++||+++|++||+||+++++|+..... ...++++||||++|| +
T Consensus 159 ~~~~~~~~~~~~v~~l~~~~Ga~v~~~~~~~HD~~~A~vshlPh~ia~aL~~~~~~~~~~~~~laa~gfrd~tRi----a 234 (341)
T 3ktd_A 159 DINSTWISIWKDVVQMALAVGAEVVPSRVGPHDAAAARVSHLTHILAETLAIVGDNGGALSLSLAAGSYRDSTRV----A 234 (341)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTCEEEECCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTHHHHHHHCCHHHHHHTGG----G
T ss_pred hhccchHHHHHHHHHHHHHcCCEEEEeCHHHHHHHHHHHhHHHHHHHHHHHHHhhcchHHHHHHccccHHHHHHH----h
Confidence 788999999999999999999999999999999999999998764321 124789999999998 8
Q ss_pred CCChHhHHHHHhhCHhH-HHHHHHHHHHHHHHHHHHHhhHHHHHHHHhccCc
Q 044593 248 GDSFDLYYGLFMYNKNS-LEQLQRLEMAFESIKQQLFGQMFRVYRKELFGSA 298 (335)
Q Consensus 248 ~~~~~lw~~I~~~N~~~-~~~l~~~~~~l~~l~~~l~~~~~~~~~~~~~~~~ 298 (335)
++||+||++||..|+++ ++.|++|++.|+++++.|+++| +.+.+ +|.++
T Consensus 235 ~s~p~lw~di~~~N~~~~~~~l~~~~~~L~~l~~~l~~~d-~~l~~-~~~~~ 284 (341)
T 3ktd_A 235 GTDPGLVRAMCESNAGPLVKALDEALAILHEAREGLTAEQ-PNIEQ-LADNG 284 (341)
T ss_dssp GSCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHTSSS-CCCHH-HHHHH
T ss_pred cCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHccc-HHHHH-HHHHH
Confidence 99999999999999987 5999999999999999999999 77666 67666
No 3
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=100.00 E-value=9.8e-38 Score=292.09 Aligned_cols=261 Identities=18% Similarity=0.239 Sum_probs=199.4
Q ss_pred HhhhhhcCCC-ccccchhhcccCCCCCeEEEEc-ccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhH
Q 044593 7 IRAIDAAQPF-DYESQLHTQYVKSTSLKIAVIG-FGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDL 84 (335)
Q Consensus 7 ~r~~~~~~~~-~~~~~~~~~~~~~~~~kI~IIG-~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~ 84 (335)
+|++|..|.. .| .+..+ .++||+||| +|.||+++|..|.+.|++|++|||+++. +..+.
T Consensus 2 ~~~~~~~~~~~~~-----~~~~~-~~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~-------------~~~~~ 62 (298)
T 2pv7_A 2 MRESYANENQFGF-----KTINS-DIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA-------------VAESI 62 (298)
T ss_dssp -----------CC-----CCSCT-TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG-------------GHHHH
T ss_pred hhhHHhhhhccCc-----cccCC-CCCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCccc-------------CHHHH
Confidence 4667766653 22 12222 356999999 9999999999999999999999998752 34455
Q ss_pred hhcCCCEEEEecCchhHHHHHhhccccccCCccEEEEcCCCCchHHHHHHhhCCCCCceEeccccCCCCCcccccCCCcc
Q 044593 85 CELHPDVVLLSTSILSTQSVLKSIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQDFDILCTHPMFGPESAKSSWENLPF 164 (335)
Q Consensus 85 ~~~~aDvVIlavp~~~~~~vl~~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~~~~~v~~HPmaG~~~~~~~~~g~~~ 164 (335)
+ .+||+||+|||+..+.++++++. +.++++++|+|++|+|..+.+.+.+.++ .+|+++|||+|++. ..+.|.++
T Consensus 63 ~-~~aDvVilavp~~~~~~vl~~l~-~~l~~~~iv~~~~svk~~~~~~~~~~~~--~~~v~~hP~~g~~~--~~~~g~~~ 136 (298)
T 2pv7_A 63 L-ANADVVIVSVPINLTLETIERLK-PYLTENMLLADLTSVKREPLAKMLEVHT--GAVLGLHPMFGADI--ASMAKQVV 136 (298)
T ss_dssp H-TTCSEEEECSCGGGHHHHHHHHG-GGCCTTSEEEECCSCCHHHHHHHHHHCS--SEEEEEEECSCTTC--SCCTTCEE
T ss_pred h-cCCCEEEEeCCHHHHHHHHHHHH-hhcCCCcEEEECCCCCcHHHHHHHHhcC--CCEEeeCCCCCCCc--hhhcCCeE
Confidence 6 78999999999999999999985 6788999999999999888887777664 57999999999985 34567766
Q ss_pred eecccccCCChhHHHHHHHHHHHHHhcCCEEEEeChHHHHHHHHHhhhhHHHHHHHHHHc----CCC---CCCCCCcchh
Q 044593 165 MYDKVRIGNDEERIKRVDKFLDVFAKEGCRMVEMSCFDHDKYAAGSQFVTHTMGRVLERF----GVE---SSPINTKGYE 237 (335)
Q Consensus 165 i~~~~~~~~~~~~~~~~~~v~~l~~~~G~~v~~~~~~eHD~~~A~~s~lph~la~aL~~~----~~~---~~~~~~~gf~ 237 (335)
++++. + +.+.++.++++|+.+|++++++++++||.++|+++|+||++++++... +.+ ...+++++|+
T Consensus 137 ~l~~~----~--~~~~~~~v~~l~~~~G~~~~~~~~~~~d~~~a~~~~~p~~~a~~l~~~l~~~g~~~~~~~~la~~~f~ 210 (298)
T 2pv7_A 137 VRCDG----R--FPERYEWLLEQIQIWGAKIYQTNATEHDHNMTYIQALRHFSTFANGLHLSKQPINLANLLALSSPIYR 210 (298)
T ss_dssp EEEEE----E--CGGGTHHHHHHHHHTTCEEEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSCCHHHHHHTCCHHHH
T ss_pred EEecC----C--CHHHHHHHHHHHHHcCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhhcCHHHH
Confidence 77542 1 234567889999999999999999999999999999999988777543 222 1247889999
Q ss_pred hHHHHHHHhhCCChHhHHHHHhhCHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhccCch
Q 044593 238 TLLDLVDNTKGDSFDLYYGLFMYNKNSLEQLQRLEMAFESIKQQLFGQMFRVYRKELFGSAE 299 (335)
Q Consensus 238 ~~~rl~~~ia~~~~~lw~~I~~~N~~~~~~l~~~~~~l~~l~~~l~~~~~~~~~~~~~~~~~ 299 (335)
+...++.|+++++|.||++|+..|+.+...|+.|++.|+++++.|+++|.+.+.+ +|.++.
T Consensus 211 ~~~~~~~ria~~~p~~~~di~~sn~~~~~~l~~~~~~l~~~~~~l~~~d~~~l~~-~~~~a~ 271 (298)
T 2pv7_A 211 LELAMIGRLFAQDAELYADIIMDKSENLAVIETLKQTYDEALTFFENNDRQGFID-AFHKVR 271 (298)
T ss_dssp HHHHHHHHHHTSCHHHHHHHHC----CHHHHHHHHHHHHHHHHHHHTTCHHHHHH-HHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHH-HHHHHH
Confidence 9433333448999999999999999874499999999999999999999998877 554443
No 4
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=100.00 E-value=2.3e-36 Score=280.91 Aligned_cols=259 Identities=17% Similarity=0.277 Sum_probs=209.3
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHc--CCeEEEEcCCCCcHHHHHhCCCc--eecChhhHhhcCCCEEEEecCchhHHHH
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARH--HHTLLVHSRSDHSPAVRQQLNAP--FFADLNDLCELHPDVVLLSTSILSTQSV 104 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~--G~~V~~~dr~~~~~~~a~~~g~~--~~~~~~~~~~~~aDvVIlavp~~~~~~v 104 (335)
|++|||+|||+|.||+++|..|.+. |++|++||++++..+.+.+.|+. .+.++.+++ .++|+||+|||+....++
T Consensus 4 M~~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~-~~aDvVilavp~~~~~~v 82 (290)
T 3b1f_A 4 MEEKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGIVDEATADFKVFA-ALADVIILAVPIKKTIDF 82 (290)
T ss_dssp GCCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTSCSEEESCTTTTG-GGCSEEEECSCHHHHHHH
T ss_pred cccceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCcccccCCHHHhh-cCCCEEEEcCCHHHHHHH
Confidence 5578999999999999999999988 57999999998877667677773 456776666 789999999999999999
Q ss_pred Hhhccccc-cCCccEEEEcCCCCchHHHHHHhhCCC-CCceEeccccCCCCCc------ccccCCCcceecccccCCChh
Q 044593 105 LKSIPFQR-LKRSTLFVDVLSVKEFPRNLFLKYLPQ-DFDILCTHPMFGPESA------KSSWENLPFMYDKVRIGNDEE 176 (335)
Q Consensus 105 l~~l~~~~-l~~~~iVvd~~SvK~~~~~~l~~~l~~-~~~~v~~HPmaG~~~~------~~~~~g~~~i~~~~~~~~~~~ 176 (335)
++++. +. ++++++|+|+++++..+.+.+.+.++. +.+|++.|||+|++.. .+.|.|.++++++. ...
T Consensus 83 ~~~l~-~~~l~~~~ivi~~~~~~~~~~~~l~~~l~~~~~~~v~~~P~~g~~~~g~~~a~~~l~~g~~~~~~~~----~~~ 157 (290)
T 3b1f_A 83 IKILA-DLDLKEDVIITDAGSTKYEIVRAAEYYLKDKPVQFVGSHPMAGSHKSGAVAANVNLFENAYYIFSPS----CLT 157 (290)
T ss_dssp HHHHH-TSCCCTTCEEECCCSCHHHHHHHHHHHHTTSSCEEEEEEEC-----CCTTSCCTTTTTTSEEEEEEC----TTC
T ss_pred HHHHH-hcCCCCCCEEEECCCCchHHHHHHHHhccccCCEEEEeCCcCCCCcchHHHhhHHHhCCCeEEEecC----CCC
Confidence 99985 67 889999999999987766777777765 6789999999986642 12345655565431 122
Q ss_pred HHHHHHHHHHHHHhcCCEEEEeChHHHHHHHHHhhhhHHHHHHHHHHc----CCC---CCCCCCcchhhHHHHHHHhhCC
Q 044593 177 RIKRVDKFLDVFAKEGCRMVEMSCFDHDKYAAGSQFVTHTMGRVLERF----GVE---SSPINTKGYETLLDLVDNTKGD 249 (335)
Q Consensus 177 ~~~~~~~v~~l~~~~G~~v~~~~~~eHD~~~A~~s~lph~la~aL~~~----~~~---~~~~~~~gf~~~~rl~~~ia~~ 249 (335)
+.+.++.++++|+.+|++++++++++||.+++.+||++|+++.++.+. +.+ ...+.+++|++++|+ +++
T Consensus 158 ~~~~~~~v~~l~~~~G~~~~~~~~~~~d~~~a~~s~~~~~~a~~~~~~~~~~g~~~~~~~~la~~~~~~~~rl----a~~ 233 (290)
T 3b1f_A 158 KPNTIPALQDLLSGLHARYVEIDAAEHDCVTSQISHFPHIIASSLMKQAGDFSESHEMTKHFAAGGFRDMTRI----AES 233 (290)
T ss_dssp CTTHHHHHHHHTGGGCCEEEECCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHCTHHHHHCCHHHHHTTGG----GGS
T ss_pred CHHHHHHHHHHHHHcCCEEEEcCHHHHHHHHHHHhhHHHHHHHHHHHHHHhcccchhhHHhhccccHHhhhhh----hcC
Confidence 345678899999999999999999999999999999999988776542 211 124778999999988 688
Q ss_pred ChHhHHHHHhhCHhH-HHHHHHHHHHHHHHHHHHHhhHHHHHHHHhccCc
Q 044593 250 SFDLYYGLFMYNKNS-LEQLQRLEMAFESIKQQLFGQMFRVYRKELFGSA 298 (335)
Q Consensus 250 ~~~lw~~I~~~N~~~-~~~l~~~~~~l~~l~~~l~~~~~~~~~~~~~~~~ 298 (335)
+|.||.+++..|+.. .+.++.|++.|+.+++.|+++|.+.+++ +|.++
T Consensus 234 ~p~~~~~~~~~n~~~~~~~l~~~~~~l~~~~~~l~~~d~~~l~~-~~~~~ 282 (290)
T 3b1f_A 234 EPGMWTSILLTNQEAVLDRIENFKQRLDEVSNLIKARDENAIWA-FFNQS 282 (290)
T ss_dssp CHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH-HHHHH
T ss_pred CHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHH-HHHHH
Confidence 999999999999987 6999999999999999999999999888 66554
No 5
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=100.00 E-value=6.5e-35 Score=269.94 Aligned_cols=255 Identities=16% Similarity=0.190 Sum_probs=209.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHHcCC--eEEEEcCCCCcHHHHHhCCCc--eecChhhHhhc-CCCEEEEecCchhHHHHH
Q 044593 31 SLKIAVIGFGNFGQFLAKAFARHHH--TLLVHSRSDHSPAVRQQLNAP--FFADLNDLCEL-HPDVVLLSTSILSTQSVL 105 (335)
Q Consensus 31 ~~kI~IIG~G~mG~siA~~L~~~G~--~V~~~dr~~~~~~~a~~~g~~--~~~~~~~~~~~-~aDvVIlavp~~~~~~vl 105 (335)
+|||+|||+|.||++++..|.+.|+ +|++||++++..+.+.+.|+. ..+++.+.+ . ++|+||+|||+..+.+++
T Consensus 1 m~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~aDvVilavp~~~~~~v~ 79 (281)
T 2g5c_A 1 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVE-DFSPDFVMLSSPVRTFREIA 79 (281)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGG-GTCCSEEEECSCHHHHHHHH
T ss_pred CcEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccccCCHHHHh-cCCCCEEEEcCCHHHHHHHH
Confidence 3689999999999999999999998 999999998877777778875 355676776 8 999999999999999999
Q ss_pred hhccccccCCccEEEEcCCCCchHHHHHHhhCCCCCceEeccccCCCCCcc------cccCCCcceecccccCCChhHHH
Q 044593 106 KSIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQDFDILCTHPMFGPESAK------SSWENLPFMYDKVRIGNDEERIK 179 (335)
Q Consensus 106 ~~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~~~~~v~~HPmaG~~~~~------~~~~g~~~i~~~~~~~~~~~~~~ 179 (335)
.++. +.++++++|+|+++++....+.+.+.++. .+++.|||+|++... +.+.+.++++++ ....+.+
T Consensus 80 ~~l~-~~l~~~~iv~~~~~~~~~~~~~l~~~l~~--~~v~~~p~~~~~~~gp~~a~~~l~~g~~~~~~~----~~~~~~~ 152 (281)
T 2g5c_A 80 KKLS-YILSEDATVTDQGSVKGKLVYDLENILGK--RFVGGHPIAGTEKSGVEYSLDNLYEGKKVILTP----TKKTDKK 152 (281)
T ss_dssp HHHH-HHSCTTCEEEECCSCCTHHHHHHHHHHGG--GEECEEEECCCSCCSGGGCCSSTTTTCEEEECC----CSSSCHH
T ss_pred HHHH-hhCCCCcEEEECCCCcHHHHHHHHHhccc--cceeeccccCCccCChhhhhhHHhCCCCEEEec----CCCCCHH
Confidence 9884 57889999999999998777777777654 399999999876421 234566666653 2233456
Q ss_pred HHHHHHHHHHhcCCEEEEeChHHHHHHHHHhhhhHHHHHHHHHH----cCCC---CCCCCCcchhhHHHHHHHhhCCChH
Q 044593 180 RVDKFLDVFAKEGCRMVEMSCFDHDKYAAGSQFVTHTMGRVLER----FGVE---SSPINTKGYETLLDLVDNTKGDSFD 252 (335)
Q Consensus 180 ~~~~v~~l~~~~G~~v~~~~~~eHD~~~A~~s~lph~la~aL~~----~~~~---~~~~~~~gf~~~~rl~~~ia~~~~~ 252 (335)
.++.++++|+.+|++++++++++||.++++++|+||++++++.+ .+.+ ...+.+++|++++|+ +.++|.
T Consensus 153 ~~~~v~~l~~~~g~~~~~~~~~~~d~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~r~----~~~~p~ 228 (281)
T 2g5c_A 153 RLKLVKRVWEDVGGVVEYMSPELHDYVFGVVSHLPHAVAFALVDTLIHMSTPEVDLFKYPGGGFKDFTRI----AKSDPI 228 (281)
T ss_dssp HHHHHHHHHHHTTCEEEECCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCBTTBCGGGCCTTTGGGC-------CCSCHH
T ss_pred HHHHHHHHHHHcCCEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHhhccccHHHHhHH----hcCCHH
Confidence 78899999999999999999999999999999999998776643 2322 235789999999998 679999
Q ss_pred hHHHHHhhCHhH-HHHHHHHHHHHHHHHHHHHhhHHHHHHHHhccCc
Q 044593 253 LYYGLFMYNKNS-LEQLQRLEMAFESIKQQLFGQMFRVYRKELFGSA 298 (335)
Q Consensus 253 lw~~I~~~N~~~-~~~l~~~~~~l~~l~~~l~~~~~~~~~~~~~~~~ 298 (335)
+|.+|+.+|+.. ++.|+.|++.|+.+++.++++|.+.+++ +|.++
T Consensus 229 ~~~~~~~sn~~~~~~~l~~~~~~l~~~~~~i~~~d~~~l~~-~~~~~ 274 (281)
T 2g5c_A 229 MWRDIFLENKENVMKAIEGFEKSLNHLKELIVREAEEELVE-YLKEV 274 (281)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH-HHHHH
T ss_pred HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHH-HHHHH
Confidence 999999999976 6999999999999999999999999888 56544
No 6
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=100.00 E-value=2.2e-32 Score=252.58 Aligned_cols=252 Identities=19% Similarity=0.258 Sum_probs=207.6
Q ss_pred CeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCc--eecChhhHhhcCCCEEEEecCchhHHHHHhhcc
Q 044593 32 LKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAP--FFADLNDLCELHPDVVLLSTSILSTQSVLKSIP 109 (335)
Q Consensus 32 ~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~--~~~~~~~~~~~~aDvVIlavp~~~~~~vl~~l~ 109 (335)
|||+|||+|.||++++..|.+.|++|++|||+++..+.+.+.|+. ...++.++ .++|+||+|+|+..+.++++++.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~D~vi~av~~~~~~~~~~~l~ 78 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLL--QTAKIIFLCTPIQLILPTLEKLI 78 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGG--TTCSEEEECSCHHHHHHHHHHHG
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCCccccCCHHHh--CCCCEEEEECCHHHHHHHHHHHH
Confidence 689999999999999999999999999999998877667777774 45566665 58999999999999999999985
Q ss_pred ccccCCccEEEEcCCCCchHHHHHHhhCCCCCceEeccccCCCCCc-c-----cccCCCcceecccccCCChhHHHHHHH
Q 044593 110 FQRLKRSTLFVDVLSVKEFPRNLFLKYLPQDFDILCTHPMFGPESA-K-----SSWENLPFMYDKVRIGNDEERIKRVDK 183 (335)
Q Consensus 110 ~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~~~~~v~~HPmaG~~~~-~-----~~~~g~~~i~~~~~~~~~~~~~~~~~~ 183 (335)
+.++++++|+|++++|....+.+.+.++ ++++.||++|++.. + +.+.+.++++++ .+..+.+..+.
T Consensus 79 -~~~~~~~~vv~~~~~~~~~~~~~~~~~~---~~~~~~p~~g~~~~gp~~a~~~~~~g~~~~~~~----~~~~~~~~~~~ 150 (279)
T 2f1k_A 79 -PHLSPTAIVTDVASVKTAIAEPASQLWS---GFIGGHPMAGTAAQGIDGAEENLFVNAPYVLTP----TEYTDPEQLAC 150 (279)
T ss_dssp -GGSCTTCEEEECCSCCHHHHHHHHHHST---TCEEEEECCCCSCSSGGGCCTTTTTTCEEEEEE----CTTCCHHHHHH
T ss_pred -hhCCCCCEEEECCCCcHHHHHHHHHHhC---CEeecCcccCCccCCHHHHhHHHhCCCcEEEec----CCCCCHHHHHH
Confidence 6788999999999998877777776654 68999999987652 1 234555555543 22234567889
Q ss_pred HHHHHHhcCCEEEEeChHHHHHHHHHhhhhHHHHHHHHHHcCC--C-------CCCCCCcchhhHHHHHHHhhCCChHhH
Q 044593 184 FLDVFAKEGCRMVEMSCFDHDKYAAGSQFVTHTMGRVLERFGV--E-------SSPINTKGYETLLDLVDNTKGDSFDLY 254 (335)
Q Consensus 184 v~~l~~~~G~~v~~~~~~eHD~~~A~~s~lph~la~aL~~~~~--~-------~~~~~~~gf~~~~rl~~~ia~~~~~lw 254 (335)
++++|+.+|++++++++.+||.++++++|+||.++.++..... + ...+.+++|++++|+ +.++|.+|
T Consensus 151 v~~l~~~~g~~~~~~~~~~~~~~~~~~~~~p~~i~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~r~----~~~~p~~~ 226 (279)
T 2f1k_A 151 LRSVLEPLGVKIYLCTPADHDQAVAWISHLPVMVSAALIQACAGEKDGDILKLAQNLASSGFRDTSRV----GGGNPELG 226 (279)
T ss_dssp HHHHHGGGTCEEEECCHHHHHHHHHHHTHHHHHHHHHHHHHHHTCSCHHHHHHHHHHCCHHHHHHHTG----GGSCHHHH
T ss_pred HHHHHHHcCCEEEEcCHHHHHHHHHHHhhHHHHHHHHHHHHHHhcccccchhHHHhhcCCcccchhcc----cCCCHHHH
Confidence 9999999999999999999999999999999999988865321 1 124678899999988 67999999
Q ss_pred HHHHhhCHhH-HHHHHHHHHHHHHHHHHHHhhHHHHHHHHhccCc
Q 044593 255 YGLFMYNKNS-LEQLQRLEMAFESIKQQLFGQMFRVYRKELFGSA 298 (335)
Q Consensus 255 ~~I~~~N~~~-~~~l~~~~~~l~~l~~~l~~~~~~~~~~~~~~~~ 298 (335)
.+++.+|+.. ++.|+.|++.|+.++..+.++|.+.+.. .|.++
T Consensus 227 ~~~~~s~~~~~~~~l~~~~~~l~~~~~~i~~~d~~a~~~-~~~~~ 270 (279)
T 2f1k_A 227 TMMATYNQRALLKSLQDYRQHLDQLITLISNQQWPELHR-LLQQT 270 (279)
T ss_dssp HHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH-HHHHH
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHH-HHHHH
Confidence 9999999987 6999999999999999999999998777 55444
No 7
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=99.96 E-value=3.1e-30 Score=245.39 Aligned_cols=242 Identities=14% Similarity=0.146 Sum_probs=190.5
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCc-HHHHHhCCCceecChhhHhhcCCCEEEEecCchhHHHHHh-
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHS-PAVRQQLNAPFFADLNDLCELHPDVVLLSTSILSTQSVLK- 106 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~-~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~~~~vl~- 106 (335)
...|+|+|||+|.||+++|..|++.|++|+++|++++. .+.+.+.|+... ++.+++ .++|+||+|||+....+++.
T Consensus 14 l~~~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~~~~~~~a~~~G~~~~-~~~e~~-~~aDvVilavp~~~~~~v~~~ 91 (338)
T 1np3_A 14 IQGKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKVA-DVKTAV-AAADVVMILTPDEFQGRLYKE 91 (338)
T ss_dssp HHTSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEEE-CHHHHH-HTCSEEEECSCHHHHHHHHHH
T ss_pred hcCCEEEEECchHHHHHHHHHHHHCcCEEEEEECChHHHHHHHHHCCCEEc-cHHHHH-hcCCEEEEeCCcHHHHHHHHH
Confidence 34679999999999999999999999999999999865 667778888665 777777 79999999999999999998
Q ss_pred hccccccCCccEEEEcCCCCchHHHHHHhhC-CCCCceEeccccCCCCCc-ccccC---CCcceecccccCCChhHHHHH
Q 044593 107 SIPFQRLKRSTLFVDVLSVKEFPRNLFLKYL-PQDFDILCTHPMFGPESA-KSSWE---NLPFMYDKVRIGNDEERIKRV 181 (335)
Q Consensus 107 ~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l-~~~~~~v~~HPmaG~~~~-~~~~~---g~~~i~~~~~~~~~~~~~~~~ 181 (335)
++. +.++++++|+|++|++. .+.+.. +.+..|++.|| .||... .+.|. |.++++++.. . .+.+..
T Consensus 92 ~i~-~~l~~~~ivi~~~gv~~----~~~~~~~~~~~~vv~~~P-~gp~~a~~~l~~~G~g~~~ii~~~~-~---~~~~a~ 161 (338)
T 1np3_A 92 EIE-PNLKKGATLAFAHGFSI----HYNQVVPRADLDVIMIAP-KAPGHTVRSEFVKGGGIPDLIAIYQ-D---ASGNAK 161 (338)
T ss_dssp HTG-GGCCTTCEEEESCCHHH----HTTSSCCCTTCEEEEEEE-SSCSHHHHHHHHTTCCCCEEEEEEE-C---SSSCHH
T ss_pred HHH-hhCCCCCEEEEcCCchh----HHHhhcCCCCcEEEeccC-CCCchhHHHHHhccCCCeEEEEecC-C---CCHHHH
Confidence 885 67899999999987643 233333 44567999999 566532 12333 7787776421 1 123456
Q ss_pred HHHHHHHHhcCC-E--EEEeChHHHHHHHHHhhh------hHHHHHHHH---HHcCCCCC--------------CC-CCc
Q 044593 182 DKFLDVFAKEGC-R--MVEMSCFDHDKYAAGSQF------VTHTMGRVL---ERFGVESS--------------PI-NTK 234 (335)
Q Consensus 182 ~~v~~l~~~~G~-~--v~~~~~~eHD~~~A~~s~------lph~la~aL---~~~~~~~~--------------~~-~~~ 234 (335)
+.+.++++.+|+ + ++.+++++||...++++| +||+++.++ ++.|.+.. .+ ..+
T Consensus 162 ~~~~~l~~~lG~~~agv~~~~~~~~~~~~~~~s~~~l~G~lp~~ia~~~e~l~~~Gl~~~~a~~e~~~~~~~~~~~~~~g 241 (338)
T 1np3_A 162 NVALSYACGVGGGRTGIIETTFKDETETDLFGEQAVLCGGCVELVKAGFETLVEAGYAPEMAYFECLHELKLIVDLMYEG 241 (338)
T ss_dssp HHHHHHHHHTTHHHHCEEECCHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHTTCCHHHHHHHHTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCccceEeechhcccchHHHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHhhhHHHHHHHHHHhc
Confidence 788899999998 6 899999999999999999 999998877 66655421 23 567
Q ss_pred chhhHHHHHHHhhCCChHhHHHHHhhCHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Q 044593 235 GYETLLDLVDNTKGDSFDLYYGLFMYNKNSLEQLQRLEMAFESIKQQLFGQMFRVYRK 292 (335)
Q Consensus 235 gf~~~~rl~~~ia~~~~~lw~~I~~~N~~~~~~l~~~~~~l~~l~~~l~~~~~~~~~~ 292 (335)
||+++ |+ ++++|.+|.||+..|+ .++ ++|++.|+++++.|+++ +.+++
T Consensus 242 g~~~~-r~----a~s~p~~~~d~~~~~~-~~~--~~~~~~l~~~~~~i~~~--~~~~~ 289 (338)
T 1np3_A 242 GIANM-NY----SISNNAEYGEYVTGPE-VIN--AESRAAMRNALKRIQDG--EYAKM 289 (338)
T ss_dssp HHHHH-HH----HSCHHHHHHHHHHHHH-HSC--HHHHHHHHHHHHHHHTT--HHHHH
T ss_pred CHHHH-HH----hcCCHHHHhhhhcCCc-ccc--HHHHHHHHHHHHHHhCC--HHHHH
Confidence 88887 75 8999999999999999 434 89999999999999984 34455
No 8
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=99.93 E-value=2.2e-25 Score=206.66 Aligned_cols=232 Identities=14% Similarity=0.120 Sum_probs=166.6
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCchhHHHHHhhcc
Q 044593 31 SLKIAVIGF-GNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILSTQSVLKSIP 109 (335)
Q Consensus 31 ~~kI~IIG~-G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~~~~vl~~l~ 109 (335)
+|||+|||+ |.||++++..|.+.|++|++|||+++..+.+.+.|+... +..+.+ .++|+||+|+|+..+.++++++.
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~-~~~~~~-~~aDvVi~av~~~~~~~v~~~l~ 88 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGMGIPLT-DGDGWI-DEADVVVLALPDNIIEKVAEDIV 88 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHTTCCCC-CSSGGG-GTCSEEEECSCHHHHHHHHHHHG
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhcCCCcC-CHHHHh-cCCCEEEEcCCchHHHHHHHHHH
Confidence 579999999 999999999999999999999999877666666776543 555666 78999999999999999999985
Q ss_pred ccccCCccEEEEcCCCCchHHHHHHhhCCCCCceEeccccCCCCCc----ccccCCC-------cceecccccCCChhHH
Q 044593 110 FQRLKRSTLFVDVLSVKEFPRNLFLKYLPQDFDILCTHPMFGPESA----KSSWENL-------PFMYDKVRIGNDEERI 178 (335)
Q Consensus 110 ~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~~~~~v~~HPmaG~~~~----~~~~~g~-------~~i~~~~~~~~~~~~~ 178 (335)
+.++++++|+|+++. . ..+.+.+ +..+.+|++.||++|++.. ...+.|. ..++.+ .+ .+.
T Consensus 89 -~~l~~~~ivv~~s~~-~-~~~~l~~-~~~~~~~v~~~P~~~~~~~~~~~~~~~~g~l~~~~~~~~i~~~--~~---~~~ 159 (286)
T 3c24_A 89 -PRVRPGTIVLILDAA-A-PYAGVMP-ERADITYFIGHPCHPPLFNDETDPAARTDYHGGIAKQAIVCAL--MQ---GPE 159 (286)
T ss_dssp -GGSCTTCEEEESCSH-H-HHHTCSC-CCTTSEEEEEEECCSCSSCCCCSHHHHTCSSSSSSCEEEEEEE--EE---SCT
T ss_pred -HhCCCCCEEEECCCC-c-hhHHHHh-hhCCCeEEecCCCCccccccccchhhccCcccccccceeeeec--cC---CCH
Confidence 678899999996543 2 3344444 3335689999999998732 1123442 222221 11 234
Q ss_pred HHHHHHHHHHHhcCC---EEEEeChHHHHHH-HHHh--hhhHHHHHHH--HHH----cCCCCC---CCCCcchhhHHHHH
Q 044593 179 KRVDKFLDVFAKEGC---RMVEMSCFDHDKY-AAGS--QFVTHTMGRV--LER----FGVESS---PINTKGYETLLDLV 243 (335)
Q Consensus 179 ~~~~~v~~l~~~~G~---~v~~~~~~eHD~~-~A~~--s~lph~la~a--L~~----~~~~~~---~~~~~gf~~~~rl~ 243 (335)
+.++.++++|+.+|. +++++++++||.+ .+++ ++.+|+++.+ |.. .+++.. .+..++|+....
T Consensus 160 ~~~~~v~~l~~~~G~~~~~~~~v~~~~~~~~~~a~~n~~~~~~~~~~~eal~~~~~~~Gl~~~~~~~~~~~~~~~~~~-- 237 (286)
T 3c24_A 160 EHYAIGADICETMWSPVTRTHRVTTEQLAILEPGLSEMVAMPFVETMVHAVDECADRYGIDRQAALDFMIGHLNVEIA-- 237 (286)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEECCHHHHHHHTTHHHHTTHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHhcCCcceEEEeChhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH--
Confidence 567889999999999 8999999999999 8888 8999987654 532 355421 234455665543
Q ss_pred HHhhCCChHhHHHHHhhCHhHHHHHHHHHHHHHHHHHHHHhhHHHH
Q 044593 244 DNTKGDSFDLYYGLFMYNKNSLEQLQRLEMAFESIKQQLFGQMFRV 289 (335)
Q Consensus 244 ~~ia~~~~~lw~~I~~~N~~~~~~l~~~~~~l~~l~~~l~~~~~~~ 289 (335)
++..++|.+|.||+..| ++.++..|+++|++.
T Consensus 238 -~~~~~~p~~~~di~~~~-------------i~~~~~~l~~~~~~~ 269 (286)
T 3c24_A 238 -MWFGYSPKVPSDAALRL-------------MEFAKDIVVKEDWRE 269 (286)
T ss_dssp -HHTTSSCCC---CCSTT-------------HHHHHHHHBCTTGGG
T ss_pred -HHHhhCCchhHHHHHHH-------------HHHHHHHHhccCHHH
Confidence 34678999999999998 355555665555543
No 9
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=99.92 E-value=5.8e-24 Score=194.14 Aligned_cols=235 Identities=17% Similarity=0.173 Sum_probs=169.5
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcC----CeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCchhHHHH
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHH----HTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILSTQSV 104 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G----~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~~~~v 104 (335)
|++|||+|||+|.||++++..|.++| ++|++|||+++. .|+....++.+++ .++|+||+|+|+..+.++
T Consensus 2 m~~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~~------~g~~~~~~~~~~~-~~~D~vi~~v~~~~~~~v 74 (262)
T 2rcy_A 2 MENIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKKN------TTLNYMSSNEELA-RHCDIIVCAVKPDIAGSV 74 (262)
T ss_dssp CSSSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCCS------SSSEECSCHHHHH-HHCSEEEECSCTTTHHHH
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCccc------CceEEeCCHHHHH-hcCCEEEEEeCHHHHHHH
Confidence 34679999999999999999999999 799999999876 5777777777776 789999999999999999
Q ss_pred HhhccccccCCccEEEEcCCCCchHHHHHHhhCCCC---CceEeccccCCCCCcccccCCCcceecccccCCChhHHHHH
Q 044593 105 LKSIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQD---FDILCTHPMFGPESAKSSWENLPFMYDKVRIGNDEERIKRV 181 (335)
Q Consensus 105 l~~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~~---~~~v~~HPmaG~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~ 181 (335)
+.++. +.++++.+|+++++++.. .+++.++.+ +++++.||+.+.+ | ..++++ .+..+.+.+
T Consensus 75 ~~~l~-~~l~~~~vv~~~~gi~~~---~l~~~~~~~~~~v~~~p~~p~~~~~-------g-~~~~~~----~~~~~~~~~ 138 (262)
T 2rcy_A 75 LNNIK-PYLSSKLLISICGGLNIG---KLEEMVGSENKIVWVMPNTPCLVGE-------G-SFIYCS----NKNVNSTDK 138 (262)
T ss_dssp HHHSG-GGCTTCEEEECCSSCCHH---HHHHHHCTTSEEEEEECCGGGGGTC-------E-EEEEEE----CTTCCHHHH
T ss_pred HHHHH-HhcCCCEEEEECCCCCHH---HHHHHhCCCCcEEEECCChHHHHcC-------C-eEEEEe----CCCCCHHHH
Confidence 99995 567555677777777653 455555543 3567788887653 3 334432 222345678
Q ss_pred HHHHHHHHhcCCEEEEeChHHHHHHHHHhhhhHHHHHHH---H----HHcCCCCC---CCCCcchhhHHHHHHHhhCCCh
Q 044593 182 DKFLDVFAKEGCRMVEMSCFDHDKYAAGSQFVTHTMGRV---L----ERFGVESS---PINTKGYETLLDLVDNTKGDSF 251 (335)
Q Consensus 182 ~~v~~l~~~~G~~v~~~~~~eHD~~~A~~s~lph~la~a---L----~~~~~~~~---~~~~~gf~~~~rl~~~ia~~~~ 251 (335)
+.++++|+.+|. +++++++.||.+++++++.||.+... + .+.+++.. .+..++|++..+++.+ .+.+|
T Consensus 139 ~~~~~ll~~~G~-~~~~~~~~~~~~~a~~~~~~~~~~~~~~al~~~~~~~Gl~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 216 (262)
T 2rcy_A 139 KYVNDIFNSCGI-IHEIKEKDMDIATAISGCGPAYVYLFIESLIDAGVKNGLSRELSKNLVLQTIKGSVEMVKK-SDQPV 216 (262)
T ss_dssp HHHHHHHHTSEE-EEECCGGGHHHHHHHTTSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHH-CSSCH
T ss_pred HHHHHHHHhCCC-EEEeCHHHccHHHHHHccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHh-cCCCH
Confidence 899999999996 99999999999999999998876332 2 23344321 2334556666665322 27789
Q ss_pred HhHHHHHhhCHhH-HHHHHHHHHHHHHHHHHHHhhHHHHH
Q 044593 252 DLYYGLFMYNKNS-LEQLQRLEMAFESIKQQLFGQMFRVY 290 (335)
Q Consensus 252 ~lw~~I~~~N~~~-~~~l~~~~~~l~~l~~~l~~~~~~~~ 290 (335)
.||.+++..|+.. .+.++.|.+. .++..+.+.....+
T Consensus 217 ~~l~d~~~~~~~t~~~~l~~l~~~--~~~~~~~~a~~~~~ 254 (262)
T 2rcy_A 217 QQLKDNIVSPGGITAVGLYSLEKN--SFKYTVMNAVEAAC 254 (262)
T ss_dssp HHHHHHHCCTTSHHHHHHHHHHHT--THHHHHHHHHHHHH
T ss_pred HHHHHhcCCCChHHHHHHHHHHHC--ChHHHHHHHHHHHH
Confidence 9999999888765 5777777654 45555555444443
No 10
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=99.91 E-value=9.6e-24 Score=195.52 Aligned_cols=229 Identities=14% Similarity=0.100 Sum_probs=169.7
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCC---eEEEEcCCCCcHHHHHh-CCCceecChhhHhhcCCCEEEEecCchhHHHH
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHH---TLLVHSRSDHSPAVRQQ-LNAPFFADLNDLCELHPDVVLLSTSILSTQSV 104 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~---~V~~~dr~~~~~~~a~~-~g~~~~~~~~~~~~~~aDvVIlavp~~~~~~v 104 (335)
|++|||+|||+|+||++++..|.++|+ +|++|||+++..+.+.+ .|+..+.++.+++ +++|+||+|||+..+.++
T Consensus 1 M~~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~-~~aDvVilav~p~~~~~v 79 (280)
T 3tri_A 1 MNTSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGA-LNADVVVLAVKPHQIKMV 79 (280)
T ss_dssp -CCSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHH-SSCSEEEECSCGGGHHHH
T ss_pred CCCCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHH-hcCCeEEEEeCHHHHHHH
Confidence 356899999999999999999999998 89999999987765554 5888888888887 899999999999999999
Q ss_pred Hhhccccc-cCCccEEEEcCCCCchHHHHHHhhCCCCCceEeccccCCCCCcccccCCCcceecccccCCChhHHHHHHH
Q 044593 105 LKSIPFQR-LKRSTLFVDVLSVKEFPRNLFLKYLPQDFDILCTHPMFGPESAKSSWENLPFMYDKVRIGNDEERIKRVDK 183 (335)
Q Consensus 105 l~~l~~~~-l~~~~iVvd~~SvK~~~~~~l~~~l~~~~~~v~~HPmaG~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~~~ 183 (335)
++++. +. ++++++|+++++. ...+.+++.++.+.+++++||+.....+ .|...+. +++..+++..+.
T Consensus 80 l~~l~-~~~l~~~~iiiS~~ag--i~~~~l~~~l~~~~~vvr~mPn~p~~v~----~g~~~l~-----~~~~~~~~~~~~ 147 (280)
T 3tri_A 80 CEELK-DILSETKILVISLAVG--VTTPLIEKWLGKASRIVRAMPNTPSSVR----AGATGLF-----ANETVDKDQKNL 147 (280)
T ss_dssp HHHHH-HHHHTTTCEEEECCTT--CCHHHHHHHHTCCSSEEEEECCGGGGGT----CEEEEEE-----CCTTSCHHHHHH
T ss_pred HHHHH-hhccCCCeEEEEecCC--CCHHHHHHHcCCCCeEEEEecCChHHhc----CccEEEE-----eCCCCCHHHHHH
Confidence 99995 56 7888787776433 2246677777766789999997654432 2333222 234445677889
Q ss_pred HHHHHHhcCCEEEEe-ChHHHHHHHHHhhhhHHHHHH---HHH----HcCCCCC---CCCCcchhhHHHHHHHhhCCChH
Q 044593 184 FLDVFAKEGCRMVEM-SCFDHDKYAAGSQFVTHTMGR---VLE----RFGVESS---PINTKGYETLLDLVDNTKGDSFD 252 (335)
Q Consensus 184 v~~l~~~~G~~v~~~-~~~eHD~~~A~~s~lph~la~---aL~----~~~~~~~---~~~~~gf~~~~rl~~~ia~~~~~ 252 (335)
++++|+.+|. ++++ ++++||.+++++++.|+.+.. +|. +.|++.. .+....+....+++.+ .+.+|.
T Consensus 148 v~~l~~~iG~-~~~v~~E~~~d~~talsgsgpa~~~~~~eal~~a~v~~Gl~~~~a~~l~~~t~~G~a~~~~~-~~~~p~ 225 (280)
T 3tri_A 148 AESIMRAVGL-VIWVSSEDQIEKIAALSGSGPAYIFLIMEALQEAAEQLGLTKETAELLTEQTVLGAARMALE-TEQSVV 225 (280)
T ss_dssp HHHHHGGGEE-EEECSSHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHT-CSSCHH
T ss_pred HHHHHHHCCC-eEEECCHHHhhHHHHHhccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHh-cCCCHH
Confidence 9999999996 5555 778999999999999997642 333 3344321 2444556666666544 467899
Q ss_pred hHHHHHhhCHhH-HHHHHHHH
Q 044593 253 LYYGLFMYNKNS-LEQLQRLE 272 (335)
Q Consensus 253 lw~~I~~~N~~~-~~~l~~~~ 272 (335)
.|.+...++.-. .+.|+.|+
T Consensus 226 ~l~~~v~spgGtT~~~l~~le 246 (280)
T 3tri_A 226 QLRQFVTSPGGTTEQAIKVLE 246 (280)
T ss_dssp HHHHHHCCTTSHHHHHHHHHH
T ss_pred HHHHhccCCChHHHHHHHHHH
Confidence 999998888744 56666554
No 11
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=99.89 E-value=2.1e-22 Score=190.01 Aligned_cols=229 Identities=14% Similarity=0.117 Sum_probs=164.5
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcC----CeEEEEcCCCC--cHHHHHhCCCceecChhhHhhcCCCEEEEecCchhHH
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHH----HTLLVHSRSDH--SPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILSTQ 102 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G----~~V~~~dr~~~--~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~~~ 102 (335)
+++|||+|||+|.||+++|..|.++| ++|++|||+++ ..+.+.+.|+....++.+++ .++|+||+|||+..+.
T Consensus 20 ~~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~~~G~~~~~~~~e~~-~~aDvVilav~~~~~~ 98 (322)
T 2izz_A 20 FQSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKMGVKLTPHNKETV-QHSDVLFLAVKPHIIP 98 (322)
T ss_dssp --CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHHHHTCEEESCHHHHH-HHCSEEEECSCGGGHH
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHHHcCCEEeCChHHHh-ccCCEEEEEeCHHHHH
Confidence 45689999999999999999999999 89999999986 55556677888777787777 7899999999999999
Q ss_pred HHHhhccccccCCccEEEEcCC-CCchHHHHHHhhCCC---CCceEeccccCCCCCcccccCCCcceecccccCCChhHH
Q 044593 103 SVLKSIPFQRLKRSTLFVDVLS-VKEFPRNLFLKYLPQ---DFDILCTHPMFGPESAKSSWENLPFMYDKVRIGNDEERI 178 (335)
Q Consensus 103 ~vl~~l~~~~l~~~~iVvd~~S-vK~~~~~~l~~~l~~---~~~~v~~HPmaG~~~~~~~~~g~~~i~~~~~~~~~~~~~ 178 (335)
+++.++. +.++++++|+|+++ ++. +.+.+.++. +.+++.+||+.+.... .|.. +++ +++..+.
T Consensus 99 ~vl~~l~-~~l~~~~ivvs~s~gi~~---~~l~~~l~~~~~~~~vv~~~p~~p~~~~----~g~~-v~~----~g~~~~~ 165 (322)
T 2izz_A 99 FILDEIG-ADIEDRHIVVSCAAGVTI---SSIEKKLSAFRPAPRVIRCMTNTPVVVR----EGAT-VYA----TGTHAQV 165 (322)
T ss_dssp HHHHHHG-GGCCTTCEEEECCTTCCH---HHHHHHHHTTSSCCEEEEEECCGGGGGT----CEEE-EEE----ECTTCCH
T ss_pred HHHHHHH-hhcCCCCEEEEeCCCCCH---HHHHHHHhhcCCCCeEEEEeCCcHHHHc----CCeE-EEE----eCCCCCH
Confidence 9999985 67888999999854 432 333333321 3478999998877653 3332 332 2332335
Q ss_pred HHHHHHHHHHHhcCCEEEEeChHHHHHHHHHhhhhHHHHHH---HH----HHcCCCCC---CCCCcchhhHHHHHHHhhC
Q 044593 179 KRVDKFLDVFAKEGCRMVEMSCFDHDKYAAGSQFVTHTMGR---VL----ERFGVESS---PINTKGYETLLDLVDNTKG 248 (335)
Q Consensus 179 ~~~~~v~~l~~~~G~~v~~~~~~eHD~~~A~~s~lph~la~---aL----~~~~~~~~---~~~~~gf~~~~rl~~~ia~ 248 (335)
+..+.++++|+.+|.. ++++++.||.+++++.+.|+.++. ++ .+.+++.. .+...++....+++.+ .+
T Consensus 166 ~~~~~v~~ll~~~G~~-~~~~e~~~~~~~a~~g~gpa~~~~~~eala~a~~~~Gl~~~~a~~l~~~~~~g~~~~~~~-~~ 243 (322)
T 2izz_A 166 EDGRLMEQLLSSVGFC-TEVEEDLIDAVTGLSGSGPAYAFTALDALADGGVKMGLPRRLAVRLGAQALLGAAKMLLH-SE 243 (322)
T ss_dssp HHHHHHHHHHHTTEEE-EECCGGGHHHHHHHTTTHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHH-CS
T ss_pred HHHHHHHHHHHhCCCE-EEeCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHh-cC
Confidence 6778899999999965 567899999999999888886542 22 23355421 2334556666665432 25
Q ss_pred CChHhHHHHHhhCHhH-HHHHHHHHH
Q 044593 249 DSFDLYYGLFMYNKNS-LEQLQRLEM 273 (335)
Q Consensus 249 ~~~~lw~~I~~~N~~~-~~~l~~~~~ 273 (335)
.+|.+|.+.+..|... ...++.+.+
T Consensus 244 ~~p~~l~~~v~sp~g~t~~~l~~l~~ 269 (322)
T 2izz_A 244 QHPGQLKDNVSSPGGATIHALHVLES 269 (322)
T ss_dssp SCHHHHHHHHCCTTSHHHHHHHHHHH
T ss_pred CCHHHHHHhCCCCCcHHHHHHHHHHH
Confidence 5899999999887644 566665544
No 12
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=99.88 E-value=8.1e-23 Score=183.44 Aligned_cols=148 Identities=11% Similarity=0.093 Sum_probs=123.8
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCchhHHHHHhhcc
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILSTQSVLKSIP 109 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~~~~vl~~l~ 109 (335)
..|||+|||+|+||+++|..|+++|++|++||+. ++ + .++| |+|||.+.+.+++.++.
T Consensus 5 ~~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~------------------~~-~-~~aD--ilavP~~ai~~vl~~l~ 62 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP------------------ED-I-RDFE--LVVIDAHGVEGYVEKLS 62 (232)
T ss_dssp CCCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG------------------GG-G-GGCS--EEEECSSCHHHHHHHHH
T ss_pred CCcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH------------------HH-h-ccCC--EEEEcHHHHHHHHHHHH
Confidence 4689999999999999999999999999999983 22 3 5789 99999999999999995
Q ss_pred ccccCCccEEEEc-CCCCchHHHHHHhhCCCCCceEeccccCCCCCcccccCCCcceecccccCCChhHHHHHHHHHHHH
Q 044593 110 FQRLKRSTLFVDV-LSVKEFPRNLFLKYLPQDFDILCTHPMFGPESAKSSWENLPFMYDKVRIGNDEERIKRVDKFLDVF 188 (335)
Q Consensus 110 ~~~l~~~~iVvd~-~SvK~~~~~~l~~~l~~~~~~v~~HPmaG~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~~~v~~l~ 188 (335)
+.++++++|+|+ +|+|..+++.+.+ .+..|+++|||+|.. ++++. . +++.++.++++|
T Consensus 63 -~~l~~g~ivvd~sgs~~~~vl~~~~~---~g~~fvg~HPm~g~~----------~~i~a----~---d~~a~~~l~~L~ 121 (232)
T 3dfu_A 63 -AFARRGQMFLHTSLTHGITVMDPLET---SGGIVMSAHPIGQDR----------WVASA----L---DELGETIVGLLV 121 (232)
T ss_dssp -TTCCTTCEEEECCSSCCGGGGHHHHH---TTCEEEEEEEEETTE----------EEEEE----S---SHHHHHHHHHHH
T ss_pred -HhcCCCCEEEEECCcCHHHHHHHHHh---CCCcEEEeeeCCCCc----------eeeeC----C---CHHHHHHHHHHH
Confidence 678999999997 5677777666653 356899999998642 34331 2 245778899999
Q ss_pred HhcCCEEEEeChHHHHHHHHHhhhhHHHHHHH
Q 044593 189 AKEGCRMVEMSCFDHDKYAAGSQFVTHTMGRV 220 (335)
Q Consensus 189 ~~~G~~v~~~~~~eHD~~~A~~s~lph~la~a 220 (335)
+.+|++++.+++++||.+.|.++|+||+++.+
T Consensus 122 ~~lG~~vv~~~~~~hd~~~AAvsh~nhLv~L~ 153 (232)
T 3dfu_A 122 GELGGSIVEIADDKRAQLAAALTYAGFLSTLQ 153 (232)
T ss_dssp HHTTCEECCCCGGGHHHHHHHHHHHHHHHHHH
T ss_pred HHhCCEEEEeCHHHHhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998754
No 13
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=99.88 E-value=1.4e-22 Score=184.05 Aligned_cols=225 Identities=13% Similarity=0.119 Sum_probs=145.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHHcCC----eEEEEcCCCCcHHHHH-hCCCceecChhhHhhcCCCEEEEecCchhHHHHH
Q 044593 31 SLKIAVIGFGNFGQFLAKAFARHHH----TLLVHSRSDHSPAVRQ-QLNAPFFADLNDLCELHPDVVLLSTSILSTQSVL 105 (335)
Q Consensus 31 ~~kI~IIG~G~mG~siA~~L~~~G~----~V~~~dr~~~~~~~a~-~~g~~~~~~~~~~~~~~aDvVIlavp~~~~~~vl 105 (335)
+|||+|||+|.||.+++..|.++|+ +|++|||+++..+.+. +.|+....++.+++ +++|+||+|||+..+.+++
T Consensus 2 ~~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~e~~-~~aDvVilav~~~~~~~v~ 80 (247)
T 3gt0_A 2 DKQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYGLTTTTDNNEVA-KNADILILSIKPDLYASII 80 (247)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHCCEECSCHHHHH-HHCSEEEECSCTTTHHHHC
T ss_pred CCeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhCCEEeCChHHHH-HhCCEEEEEeCHHHHHHHH
Confidence 4799999999999999999999998 9999999987765454 46888888888877 7899999999999999999
Q ss_pred hhccccccCCccEEEE-cCCCCchHHHHHHhhCCCCCceEeccccCCCCCcccccCCCcceecccccCCChhHHHHHHHH
Q 044593 106 KSIPFQRLKRSTLFVD-VLSVKEFPRNLFLKYLPQDFDILCTHPMFGPESAKSSWENLPFMYDKVRIGNDEERIKRVDKF 184 (335)
Q Consensus 106 ~~l~~~~l~~~~iVvd-~~SvK~~~~~~l~~~l~~~~~~v~~HPmaG~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~~~v 184 (335)
+++. +.++++++|++ +++++. +.+++.++.+.++++.||......+ .|...++ ..+..+++.++.+
T Consensus 81 ~~l~-~~l~~~~~vvs~~~gi~~---~~l~~~~~~~~~~v~~~p~~p~~~~----~g~~~~~-----~~~~~~~~~~~~~ 147 (247)
T 3gt0_A 81 NEIK-EIIKNDAIIVTIAAGKSI---ESTENAFNKKVKVVRVMPNTPALVG----EGMSALC-----PNEMVTEKDLEDV 147 (247)
T ss_dssp ---C-CSSCTTCEEEECSCCSCH---HHHHHHHCSCCEEEEEECCGGGGGT----CEEEEEE-----ECTTCCHHHHHHH
T ss_pred HHHH-hhcCCCCEEEEecCCCCH---HHHHHHhCCCCcEEEEeCChHHHHc----CceEEEE-----eCCCCCHHHHHHH
Confidence 9995 67888888775 455543 4566666656678888886544332 2332222 2233445678899
Q ss_pred HHHHHhcCCEEEEeChHHHHHHHHHhhhhHHHHHH---HHH----HcCCCCC---CCCCcchhhHHHHHHHhhCCChHhH
Q 044593 185 LDVFAKEGCRMVEMSCFDHDKYAAGSQFVTHTMGR---VLE----RFGVESS---PINTKGYETLLDLVDNTKGDSFDLY 254 (335)
Q Consensus 185 ~~l~~~~G~~v~~~~~~eHD~~~A~~s~lph~la~---aL~----~~~~~~~---~~~~~gf~~~~rl~~~ia~~~~~lw 254 (335)
+++|+.+|. ++++++++||.+++++++.|+.+.. +|. +.+++.. .+...++....+++.+ .+.+|..|
T Consensus 148 ~~l~~~~G~-~~~~~e~~~d~~~a~~g~gpa~~~~~~eal~~a~~~~Gl~~~~a~~~~~~~~~gs~~~~~~-~~~~p~~l 225 (247)
T 3gt0_A 148 LNIFNSFGQ-TEIVSEKLMDVVTSVSGSSPAYVYMIIEAMADAAVLDGMPRNQAYKFAAQAVLGSAKMVLE-TGIHPGEL 225 (247)
T ss_dssp HHHHGGGEE-EEECCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHH-SCC-----
T ss_pred HHHHHhCCC-EEEeCHHHccHHHHHhccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHH-cCCCHHHH
Confidence 999999996 8888999999999999999986543 332 3454421 1223344444444433 35567777
Q ss_pred HHHHhhCHhH-HHHHHHH
Q 044593 255 YGLFMYNKNS-LEQLQRL 271 (335)
Q Consensus 255 ~~I~~~N~~~-~~~l~~~ 271 (335)
.+...++.-. .+.|..|
T Consensus 226 ~~~v~spgG~t~~gl~~l 243 (247)
T 3gt0_A 226 KDMVCSPGGTTIEAVATL 243 (247)
T ss_dssp ------------------
T ss_pred HHhcCCCCchHHHHHHHH
Confidence 7766555432 4444443
No 14
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=99.88 E-value=1.3e-21 Score=178.38 Aligned_cols=237 Identities=16% Similarity=0.215 Sum_probs=163.1
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHH-hCCCceecChhhHhhcCCCEEEEecCchhHHHHHhhc
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQ-QLNAPFFADLNDLCELHPDVVLLSTSILSTQSVLKSI 108 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~-~~g~~~~~~~~~~~~~~aDvVIlavp~~~~~~vl~~l 108 (335)
.+|||+|||+|.||..++..|.+.|++|.+|||+++..+... +.|+..+.++.+++ .++|+||+|+|+....+++.++
T Consensus 2 ~~m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~D~Vi~~v~~~~~~~v~~~l 80 (259)
T 2ahr_A 2 NAMKIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAMSHQDLI-DQVDLVILGIKPQLFETVLKPL 80 (259)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBCSSHHHHH-HTCSEEEECSCGGGHHHHHTTS
T ss_pred CccEEEEECCCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcCCEeeCCHHHHH-hcCCEEEEEeCcHhHHHHHHHh
Confidence 457999999999999999999999999999999987665443 45887777888877 7999999999988888888776
Q ss_pred cccccCCccEEEEcC-CCCchHHHHHHhhCCCCCceEeccccCCCCCcccccCCCcceecccccCCChhHHHHHHHHHHH
Q 044593 109 PFQRLKRSTLFVDVL-SVKEFPRNLFLKYLPQDFDILCTHPMFGPESAKSSWENLPFMYDKVRIGNDEERIKRVDKFLDV 187 (335)
Q Consensus 109 ~~~~l~~~~iVvd~~-SvK~~~~~~l~~~l~~~~~~v~~HPmaG~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~~~v~~l 187 (335)
. ++++|+++. +++. +.+.+.++.+.+++..||....... .|.. .++ .....+.+.++.++++
T Consensus 81 ~-----~~~~vv~~~~~~~~---~~l~~~~~~~~~~v~~~p~~~~~~~----~g~~-~i~----~~~~~~~~~~~~~~~l 143 (259)
T 2ahr_A 81 H-----FKQPIISMAAGISL---QRLATFVGQDLPLLRIMPNMNAQIL----QSST-ALT----GNALVSQELQARVRDL 143 (259)
T ss_dssp C-----CCSCEEECCTTCCH---HHHHHHHCTTSCEEEEECCGGGGGT----CEEE-EEE----ECTTCCHHHHHHHHHH
T ss_pred c-----cCCEEEEeCCCCCH---HHHHHhcCCCCCEEEEcCCchHHHc----CceE-EEE----cCCCCCHHHHHHHHHH
Confidence 2 677899885 4543 3455555544456654442211111 3322 222 1222245678889999
Q ss_pred HHhcCCEEEEeChHHHHHHHHH-------hhhhHHHHHHHHHHcCCCCC---CCCCcchhhHHHHHHHhhCCChHhHHHH
Q 044593 188 FAKEGCRMVEMSCFDHDKYAAG-------SQFVTHTMGRVLERFGVESS---PINTKGYETLLDLVDNTKGDSFDLYYGL 257 (335)
Q Consensus 188 ~~~~G~~v~~~~~~eHD~~~A~-------~s~lph~la~aL~~~~~~~~---~~~~~gf~~~~rl~~~ia~~~~~lw~~I 257 (335)
|+.+| +++++++++||.++++ +.+++|.++.++.+.+++.. .+..+++++..+++.. .+.+|.+|.+.
T Consensus 144 l~~~G-~~~~~~~~~~d~~~al~g~~~~~~~~~~~~la~~~~~~Gl~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~l~~~ 221 (259)
T 2ahr_A 144 TDSFG-STFDISEKDFDTFTALAGSSPAYIYLFIEALAKAGVKNGIPKAKALEIVTQTVLASASNLKT-SSQSPHDFIDA 221 (259)
T ss_dssp HHTTE-EEEECCGGGHHHHHHHHTTHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHH-SSSCHHHHHHH
T ss_pred HHhCC-CEEEecHHHccHHHHHhccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHh-cCCCHHHHHHh
Confidence 99999 7999999999999875 45666677766777776532 2445678888777543 23469999998
Q ss_pred HhhCHhH-HHHHHHHHHHHHHHHHHHHhhHHH
Q 044593 258 FMYNKNS-LEQLQRLEMAFESIKQQLFGQMFR 288 (335)
Q Consensus 258 ~~~N~~~-~~~l~~~~~~l~~l~~~l~~~~~~ 288 (335)
+..|... ...++.|.+ ..++..+.+....
T Consensus 222 ~~~p~~~~~~~~~~l~~--~g~~~~~~~a~~~ 251 (259)
T 2ahr_A 222 ICSPGGTTIAGLMELER--LGLTATVSSAIDK 251 (259)
T ss_dssp HCCTTSHHHHHHHHHHH--HTHHHHHHHHHHH
T ss_pred CCCCChhHHHHHHHHHH--CChHHHHHHHHHH
Confidence 8877654 466666643 2344444444333
No 15
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=99.85 E-value=3e-20 Score=169.49 Aligned_cols=222 Identities=14% Similarity=0.159 Sum_probs=156.4
Q ss_pred CeEEEEcccHHHHHHHHHHHHcC-CeEEEEcCCCCcHHHHHh-CCCceecChhhHhhcCCCEEEEecCchhHHHHHhhcc
Q 044593 32 LKIAVIGFGNFGQFLAKAFARHH-HTLLVHSRSDHSPAVRQQ-LNAPFFADLNDLCELHPDVVLLSTSILSTQSVLKSIP 109 (335)
Q Consensus 32 ~kI~IIG~G~mG~siA~~L~~~G-~~V~~~dr~~~~~~~a~~-~g~~~~~~~~~~~~~~aDvVIlavp~~~~~~vl~~l~ 109 (335)
|||+|||+|.||++++..|.+.| ++|++|||+++..+...+ .|+....+..+++ ++|+||+|+|+..+.+++.++.
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~~~~g~~~~~~~~~~~--~~D~vi~~v~~~~~~~v~~~l~ 78 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETSATLPELH--SDDVLILAVKPQDMEAACKNIR 78 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEESSCCCCC--TTSEEEECSCHHHHHHHHTTCC
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCeEEEECCCHHHHHHHHHhcCCEEeCCHHHHh--cCCEEEEEeCchhHHHHHHHhc
Confidence 68999999999999999999999 999999999876654444 5887766666653 7999999999888999999885
Q ss_pred ccccCCccEEEEcCCCCchHHHHHHhhCCCCCceEeccccCCCCCcccccCCCcceecccccCCChhHHHHHHHHHHHHH
Q 044593 110 FQRLKRSTLFVDVLSVKEFPRNLFLKYLPQDFDILCTHPMFGPESAKSSWENLPFMYDKVRIGNDEERIKRVDKFLDVFA 189 (335)
Q Consensus 110 ~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~~~~~v~~HPmaG~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~~~v~~l~~ 189 (335)
+ + +++|+|+++.... +.+.+.++.+.+++.++|....... .|...++. .+..+.+.++.++++|+
T Consensus 79 -~--~-~~ivv~~~~g~~~--~~l~~~~~~~~~~v~~~~~~~~~~~----~g~~~i~~-----~~~~~~~~~~~~~~l~~ 143 (263)
T 1yqg_A 79 -T--N-GALVLSVAAGLSV--GTLSRYLGGTRRIVRVMPNTPGKIG----LGVSGMYA-----EAEVSETDRRIADRIMK 143 (263)
T ss_dssp -C--T-TCEEEECCTTCCH--HHHHHHTTSCCCEEEEECCGGGGGT----CEEEEEEC-----CTTSCHHHHHHHHHHHH
T ss_pred -c--C-CCEEEEecCCCCH--HHHHHHcCCCCcEEEEcCCHHHHHc----CceEEEEc-----CCCCCHHHHHHHHHHHH
Confidence 4 5 8899999544332 6677777765567776543222211 33333321 22224567888999999
Q ss_pred hcCCEEEEeC-hHHHHHHHHHhhhhHHHHHHHH-------HHcCCCCC---CCCCcchhhHHHHHHHhhCCChHhHHHHH
Q 044593 190 KEGCRMVEMS-CFDHDKYAAGSQFVTHTMGRVL-------ERFGVESS---PINTKGYETLLDLVDNTKGDSFDLYYGLF 258 (335)
Q Consensus 190 ~~G~~v~~~~-~~eHD~~~A~~s~lph~la~aL-------~~~~~~~~---~~~~~gf~~~~rl~~~ia~~~~~lw~~I~ 258 (335)
.+|.++ +++ ++.||.++|++++.|+.++..+ .+.+.+.. .+...+++...+++.+ .+.+|.+|.+..
T Consensus 144 ~~g~~~-~~~~~~~~~~~~al~g~~~~~~~~~~~~l~e~~~~~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 221 (263)
T 1yqg_A 144 SVGLTV-WLDDEEKMHGITGISGSGPAYVFYLLDALQNAAIRQGFDMAEARALSLATFKGAVALAEQ-TGEDFEKLQKNV 221 (263)
T ss_dssp TTEEEE-ECSSTTHHHHHHHHTTSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHH-HCCCHHHHHHHT
T ss_pred hCCCEE-EeCChhhccHHHHHHccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHh-cCCCHHHHHHhc
Confidence 999876 787 8899999999998888765433 22344321 2334556666666543 234588999988
Q ss_pred hhCHhH-HHHHHHHH
Q 044593 259 MYNKNS-LEQLQRLE 272 (335)
Q Consensus 259 ~~N~~~-~~~l~~~~ 272 (335)
..|... ...++.|.
T Consensus 222 ~~~~~~~~~~l~~l~ 236 (263)
T 1yqg_A 222 TSKGGTTHEAVEAFR 236 (263)
T ss_dssp CCTTSHHHHHHHHHH
T ss_pred CCCChhHHHHHHHHH
Confidence 877754 46666653
No 16
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=99.84 E-value=5.3e-20 Score=172.60 Aligned_cols=177 Identities=10% Similarity=0.088 Sum_probs=140.6
Q ss_pred cCCCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCch-hHHHHH
Q 044593 27 VKSTSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSIL-STQSVL 105 (335)
Q Consensus 27 ~~~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~-~~~~vl 105 (335)
....+|||+|||+|.||..+|..|.+.|++|++|||+++..+.+.+.|+...+++.+++ +++|+||+|+|.. .+.+++
T Consensus 17 ~~~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~~~~-~~aDvvi~~vp~~~~~~~v~ 95 (310)
T 3doj_A 17 RGSHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVCESPAEVI-KKCKYTIAMLSDPCAALSVV 95 (310)
T ss_dssp -CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHH-HHCSEEEECCSSHHHHHHHH
T ss_pred ccccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeEcCCHHHHH-HhCCEEEEEcCCHHHHHHHH
Confidence 34567899999999999999999999999999999999888777788988888888887 7899999999975 678888
Q ss_pred ---hhccccccCCccEEEEcCCCCchHHHHHHhhCC-CCCceEeccccCCCCCcccccCCCcceecccccCCChhHHHHH
Q 044593 106 ---KSIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLP-QDFDILCTHPMFGPESAKSSWENLPFMYDKVRIGNDEERIKRV 181 (335)
Q Consensus 106 ---~~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~-~~~~~v~~HPmaG~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~ 181 (335)
+++. +.++++++|+|+++++....+.+.+.+. .+..|+. ||++|..... ..|...++. +++ .+.+
T Consensus 96 ~~~~~l~-~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~v~-~pv~g~~~~a--~~g~l~i~~----gg~---~~~~ 164 (310)
T 3doj_A 96 FDKGGVL-EQICEGKGYIDMSTVDAETSLKINEAITGKGGRFVE-GPVSGSKKPA--EDGQLIILA----AGD---KALF 164 (310)
T ss_dssp HSTTCGG-GGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE-CCEECCHHHH--HHTCEEEEE----EEC---HHHH
T ss_pred hCchhhh-hccCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEe-CCCCCChhHH--hcCCeEEEE----cCC---HHHH
Confidence 7774 5788999999999988766666655442 3567877 8999876532 245444443 333 4578
Q ss_pred HHHHHHHHhcCCEEEEeChHHHHHHHHHhhhhHH
Q 044593 182 DKFLDVFAKEGCRMVEMSCFDHDKYAAGSQFVTH 215 (335)
Q Consensus 182 ~~v~~l~~~~G~~v~~~~~~eHD~~~A~~s~lph 215 (335)
+.++++|+.+|.+++++++.....++.++++...
T Consensus 165 ~~~~~ll~~~g~~~~~~g~~g~a~~~Kl~~N~~~ 198 (310)
T 3doj_A 165 EESIPAFDVLGKRSFYLGQVGNGAKMKLIVNMIM 198 (310)
T ss_dssp HHHHHHHHHHEEEEEECSSTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEeCCcCHHHHHHHHHHHHH
Confidence 8999999999999999987777777887766554
No 17
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=99.84 E-value=3.5e-20 Score=171.75 Aligned_cols=172 Identities=15% Similarity=0.139 Sum_probs=139.5
Q ss_pred CeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCc-hhHHHHH---hh
Q 044593 32 LKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSI-LSTQSVL---KS 107 (335)
Q Consensus 32 ~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~-~~~~~vl---~~ 107 (335)
|||+|||+|.||..+|..|.++|++|++|||+++..+.+.+.|+...+++.+++ .++|+||+|+|. ..+.+++ ++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~-~~aDvvi~~vp~~~~~~~v~~~~~~ 80 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVV-ESCPVTFAMLADPAAAEEVCFGKHG 80 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHH-HHCSEEEECCSSHHHHHHHHHSTTC
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHH-hcCCEEEEEcCCHHHHHHHHcCcch
Confidence 799999999999999999999999999999999888777888988888888887 789999999995 5788888 77
Q ss_pred ccccccCCccEEEEcCCCCchHHHHHHhhCC-CCCceEeccccCCCCCcccccCCCcceecccccCCChhHHHHHHHHHH
Q 044593 108 IPFQRLKRSTLFVDVLSVKEFPRNLFLKYLP-QDFDILCTHPMFGPESAKSSWENLPFMYDKVRIGNDEERIKRVDKFLD 186 (335)
Q Consensus 108 l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~-~~~~~v~~HPmaG~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~~~v~~ 186 (335)
+. +.++++++|+|+++++....+.+.+.+. .+..|+. ||++|+.... ..+...++. +++ ++.++.+++
T Consensus 81 l~-~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~-~pv~g~~~~a--~~g~l~~~~----gg~---~~~~~~~~~ 149 (287)
T 3pef_A 81 VL-EGIGEGRGYVDMSTVDPATSQRIGVAVVAKGGRFLE-APVSGSKKPA--EDGTLIILA----AGD---RNLYDEAMP 149 (287)
T ss_dssp HH-HHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE-CCEECCHHHH--HHTCEEEEE----EEC---HHHHHHHHH
T ss_pred Hh-hcCCCCCEEEeCCCCCHHHHHHHHHHHHHhCCEEEE-CCCcCCHHHH--hcCCEEEEE----eCC---HHHHHHHHH
Confidence 74 5688999999999887766665554443 3567887 8999877532 234433442 333 457788999
Q ss_pred HHHhcCCEEEEeChHHHHHHHHHhhhhHH
Q 044593 187 VFAKEGCRMVEMSCFDHDKYAAGSQFVTH 215 (335)
Q Consensus 187 l~~~~G~~v~~~~~~eHD~~~A~~s~lph 215 (335)
+|+.+|.+++++++..|+.++.+++++..
T Consensus 150 ll~~~g~~~~~~g~~g~~~~~Kl~~N~~~ 178 (287)
T 3pef_A 150 GFEKMGKKIIHLGDVGKGAEMKLVVNMVM 178 (287)
T ss_dssp HHHHHEEEEEECSSTTHHHHHHHHHHHHH
T ss_pred HHHHhCCCeEEeCCCCHHHHHHHHHHHHH
Confidence 99999999999998999999988877654
No 18
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=99.82 E-value=2.2e-19 Score=167.74 Aligned_cols=172 Identities=11% Similarity=0.072 Sum_probs=134.8
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCce-ecChhhHhhcCCCEEEEecCch-hHHHHH--
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPF-FADLNDLCELHPDVVLLSTSIL-STQSVL-- 105 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~-~~~~~~~~~~~aDvVIlavp~~-~~~~vl-- 105 (335)
+.|||+|||+|.||..+|..|.++|++|++|||+++..+.+.+.|... ..++.+++ +++|+||+|+|.. .+..++
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~e~~-~~aDvvi~~vp~~~~~~~v~~~ 84 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAREFA-GVVDALVILVVNAAQVRQVLFG 84 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEESSSTTTT-TTCSEEEECCSSHHHHHHHHC-
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccCCHHHHH-hcCCEEEEECCCHHHHHHHHhC
Confidence 468999999999999999999999999999999998887777888877 77888887 7999999999986 577777
Q ss_pred -hhccccccCCccEEEEcCCCCchHHHHHHhhCC-CCCceEeccccCCCCCcccccCCCcceecccccCCChhHHHHHHH
Q 044593 106 -KSIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLP-QDFDILCTHPMFGPESAKSSWENLPFMYDKVRIGNDEERIKRVDK 183 (335)
Q Consensus 106 -~~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~-~~~~~v~~HPmaG~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~~~ 183 (335)
+++. +.++++++|+|+++++....+.+.+.+. .+..|+. ||++|..... ..|...++. +++ ++.++.
T Consensus 85 ~~~l~-~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~-~pv~g~~~~a--~~g~l~~~~----gg~---~~~~~~ 153 (303)
T 3g0o_A 85 EDGVA-HLMKPGSAVMVSSTISSADAQEIAAALTALNLNMLD-APVSGGAVKA--AQGEMTVMA----SGS---EAAFTR 153 (303)
T ss_dssp -CCCG-GGSCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEE-CCEESCHHHH--HTTCEEEEE----ECC---HHHHHH
T ss_pred hhhHH-hhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCeEEe-CCCCCChhhh--hcCCeEEEe----CCC---HHHHHH
Confidence 7774 6788999999999988766666655443 3567887 9999877432 245444442 333 467889
Q ss_pred HHHHHHhcCCEEEEeCh-HHHHHHHHHhhhh
Q 044593 184 FLDVFAKEGCRMVEMSC-FDHDKYAAGSQFV 213 (335)
Q Consensus 184 v~~l~~~~G~~v~~~~~-~eHD~~~A~~s~l 213 (335)
++++|+.+|.+++++++ ......+.+++++
T Consensus 154 ~~~ll~~~g~~~~~~~~~~g~a~~~Kl~~N~ 184 (303)
T 3g0o_A 154 LKPVLDAVASNVYRISDTPGAGSTVKIIHQL 184 (303)
T ss_dssp HHHHHHHHEEEEEEEESSTTHHHHHHHHHHH
T ss_pred HHHHHHHHCCCEEECCCCCcHHHHHHHHHHH
Confidence 99999999999988876 4555566665544
No 19
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=99.82 E-value=3.2e-19 Score=166.68 Aligned_cols=173 Identities=14% Similarity=0.126 Sum_probs=139.1
Q ss_pred CCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCchh-HHHHHhh--
Q 044593 31 SLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILS-TQSVLKS-- 107 (335)
Q Consensus 31 ~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~-~~~vl~~-- 107 (335)
|+||||||+|.||..+|+.|.++||+|++|||+++..+...+.|.....++.+++ +.+|+||+|+|... +.+++..
T Consensus 3 M~kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~a~s~~e~~-~~~dvv~~~l~~~~~v~~V~~~~~ 81 (300)
T 3obb_A 3 MKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAV-QGADVVISMLPASQHVEGLYLDDD 81 (300)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHH-TTCSEEEECCSCHHHHHHHHHSSS
T ss_pred cCEEEEeeehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcCCEEcCCHHHHH-hcCCceeecCCchHHHHHHHhchh
Confidence 5699999999999999999999999999999999888878888999999999998 89999999999876 5677754
Q ss_pred -ccccccCCccEEEEcCCCCchHHHHHHhhC-CCCCceEeccccCCCCCcccccCCCcceecccccCCChhHHHHHHHHH
Q 044593 108 -IPFQRLKRSTLFVDVLSVKEFPRNLFLKYL-PQDFDILCTHPMFGPESAKSSWENLPFMYDKVRIGNDEERIKRVDKFL 185 (335)
Q Consensus 108 -l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l-~~~~~~v~~HPmaG~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~~~v~ 185 (335)
+. +.+++|++|+|++++.......+.+.+ ..+..|+.+ |+.|...+.. .|...++. +++ ++.+++++
T Consensus 82 g~~-~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~~~lDa-PVsGg~~~A~--~G~L~imv----GG~---~~~~~~~~ 150 (300)
T 3obb_A 82 GLL-AHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLDA-PVSGGTAGAA--AGTLTFMV----GGD---AEALEKAR 150 (300)
T ss_dssp SST-TSCCC-CEEEECSCCCHHHHHHHHHHHHTTTCEEEEC-CEESCHHHHH--HTCEEEEE----ESC---HHHHHHHH
T ss_pred hhh-hcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEec-CCCCCHHHHH--hCCEEEEE----eCC---HHHHHHHH
Confidence 32 567899999999999877777776655 356789875 9998775422 46544442 444 46789999
Q ss_pred HHHHhcCCEEEEeChHHHHHHHHHhhhhHH
Q 044593 186 DVFAKEGCRMVEMSCFDHDKYAAGSQFVTH 215 (335)
Q Consensus 186 ~l~~~~G~~v~~~~~~eHD~~~A~~s~lph 215 (335)
++|+.+|.+++++.+.-....+.+++++..
T Consensus 151 p~l~~~g~~i~~~G~~G~g~~~Kl~~N~l~ 180 (300)
T 3obb_A 151 PLFEAMGRNIFHAGPDGAGQVAKVCNNQLL 180 (300)
T ss_dssp HHHHHHEEEEEEEESTTHHHHHHHHHHHHH
T ss_pred HHHHHhCCCEEEeCCccHHHHHHHHHHHHH
Confidence 999999999999988777777887665533
No 20
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=99.82 E-value=2.8e-19 Score=166.65 Aligned_cols=174 Identities=14% Similarity=0.123 Sum_probs=138.3
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCch-hHHHHHh--
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSIL-STQSVLK-- 106 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~-~~~~vl~-- 106 (335)
++|||+|||+|.||..+|..|.+.|++|++|||+++..+.+.+.|+...+++.+++ +++|+||+|+|.. .+..++.
T Consensus 2 ~m~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~-~~aDvvi~~vp~~~~~~~v~~~~ 80 (302)
T 2h78_A 2 HMKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAV-QGADVVISMLPASQHVEGLYLDD 80 (302)
T ss_dssp -CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHH-TTCSEEEECCSCHHHHHHHHHSS
T ss_pred CCCEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCeEcCCHHHHH-hCCCeEEEECCCHHHHHHHHcCc
Confidence 46899999999999999999999999999999999887777778988888888887 7999999999855 5788887
Q ss_pred -hccccccCCccEEEEcCCCCchHHHHHHhhCC-CCCceEeccccCCCCCcccccCCCcceecccccCCChhHHHHHHHH
Q 044593 107 -SIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLP-QDFDILCTHPMFGPESAKSSWENLPFMYDKVRIGNDEERIKRVDKF 184 (335)
Q Consensus 107 -~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~-~~~~~v~~HPmaG~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~~~v 184 (335)
++. +.++++++|+|++++.....+.+.+.++ .+..|+. +|++|..... ..+...++ ++++ ++.++.+
T Consensus 81 ~~~~-~~l~~~~~vi~~st~~~~~~~~l~~~~~~~g~~~~~-~pv~~~~~~~--~~g~l~~~----~~g~---~~~~~~~ 149 (302)
T 2h78_A 81 DGLL-AHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLD-APVSGGTAGA--AAGTLTFM----VGGD---AEALEKA 149 (302)
T ss_dssp SCGG-GSSCSSCEEEECSCCCHHHHHHHHHHHHHTTCCEEE-CCEESCHHHH--HHTCEEEE----EESC---HHHHHHH
T ss_pred hhHH-hcCCCCcEEEECCCCCHHHHHHHHHHHHHcCCEEEE-EEccCChhhH--hcCCceEE----eCCC---HHHHHHH
Confidence 674 5788999999999887766666655543 3567887 5998876421 12332232 2333 4677889
Q ss_pred HHHHHhcCCEEEEeChHHHHHHHHHhhhhHH
Q 044593 185 LDVFAKEGCRMVEMSCFDHDKYAAGSQFVTH 215 (335)
Q Consensus 185 ~~l~~~~G~~v~~~~~~eHD~~~A~~s~lph 215 (335)
+++|+.+|.+++++++..|+.++.+++++..
T Consensus 150 ~~ll~~~g~~~~~~~~~~~~~~~Kl~~n~~~ 180 (302)
T 2h78_A 150 RPLFEAMGRNIFHAGPDGAGQVAKVCNNQLL 180 (302)
T ss_dssp HHHHHHHEEEEEEEESTTHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCeEEcCCccHHHHHHHHHHHHH
Confidence 9999999999999988999999988887765
No 21
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=99.81 E-value=9.8e-19 Score=164.17 Aligned_cols=176 Identities=13% Similarity=0.181 Sum_probs=131.7
Q ss_pred hcccCCCCCeEEEEcccHHHHHHHHHHHHcCC-eEEEEcCCC--CcHHHHHhCCCceecChhhHhhcCCCEEEEecCchh
Q 044593 24 TQYVKSTSLKIAVIGFGNFGQFLAKAFARHHH-TLLVHSRSD--HSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILS 100 (335)
Q Consensus 24 ~~~~~~~~~kI~IIG~G~mG~siA~~L~~~G~-~V~~~dr~~--~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~ 100 (335)
+++..+.+|||+|||+|.||..+|..|.++|+ +|++|||++ +..+.+.+.|+...+++.+++ .++|+||+|||+..
T Consensus 17 ~~~~~~~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~g~~~~~~~~e~~-~~aDvVi~~vp~~~ 95 (312)
T 3qsg_A 17 NLYFQSNAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEELGVSCKASVAEVA-GECDVIFSLVTAQA 95 (312)
T ss_dssp --------CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHTTCEECSCHHHHH-HHCSEEEECSCTTT
T ss_pred cccccCCCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHCCCEEeCCHHHHH-hcCCEEEEecCchh
Confidence 33344567899999999999999999999999 999999974 566667788988888888887 78999999999999
Q ss_pred HHHHHhhccccccCCccEEEEcCCCCchHHHHHHhhCC-C--CCceEeccccCCCCCcccccCCCcceecccccCCChhH
Q 044593 101 TQSVLKSIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLP-Q--DFDILCTHPMFGPESAKSSWENLPFMYDKVRIGNDEER 177 (335)
Q Consensus 101 ~~~vl~~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~-~--~~~~v~~HPmaG~~~~~~~~~g~~~i~~~~~~~~~~~~ 177 (335)
..+++.++. +.++++++|+|++|++......+.+.+. . +..|+. +|++|+.... .+...+++ +++..
T Consensus 96 ~~~~~~~l~-~~l~~~~ivvd~st~~~~~~~~~~~~~~~~~~g~~~vd-~pv~g~~~~~---~g~l~i~v----gg~~~- 165 (312)
T 3qsg_A 96 ALEVAQQAG-PHLCEGALYADFTSCSPAVKRAIGDVISRHRPSAQYAA-VAVMSAVKPH---GHRVPLVV----DGDGA- 165 (312)
T ss_dssp HHHHHHHHG-GGCCTTCEEEECCCCCHHHHHHHHHHHHHHCTTCEEEE-EEECSCSTTT---GGGSEEEE----ESTTH-
T ss_pred HHHHHHhhH-hhcCCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCeEEe-ccccCCchhh---cCCEEEEe----cCChH-
Confidence 888888885 6788999999999998776666655443 2 567876 5999976432 34333442 34432
Q ss_pred HHHHHHHHHHHHhcCCEEEEeCh-HHHHHHHHHhhhhH
Q 044593 178 IKRVDKFLDVFAKEGCRMVEMSC-FDHDKYAAGSQFVT 214 (335)
Q Consensus 178 ~~~~~~v~~l~~~~G~~v~~~~~-~eHD~~~A~~s~lp 214 (335)
+.++++|+.+|.+++++++ -.--..+.++++..
T Consensus 166 ----~~~~~ll~~~g~~~~~~g~~~g~a~~~Kl~~n~~ 199 (312)
T 3qsg_A 166 ----RRFQAAFTLYGCRIEVLDGEVGGAALLKMCRSAV 199 (312)
T ss_dssp ----HHHHHHHHTTTCEEEECCSSTTHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHhCCCeEEcCCCCCHHHHHHHHHHHH
Confidence 6788999999999999986 34455666665543
No 22
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=99.81 E-value=3.8e-19 Score=164.72 Aligned_cols=173 Identities=13% Similarity=0.125 Sum_probs=135.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCch-hHHHHH---h
Q 044593 31 SLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSIL-STQSVL---K 106 (335)
Q Consensus 31 ~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~-~~~~vl---~ 106 (335)
+|||+|||+|.||..+|..|.++|++|++|||+++..+.+.+.|+...+++.+++ +++|+||+|+|.. .+.+++ +
T Consensus 1 M~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~-~~advvi~~v~~~~~~~~v~~~~~ 79 (287)
T 3pdu_A 1 MTTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVALGARQASSPAEVC-AACDITIAMLADPAAAREVCFGAN 79 (287)
T ss_dssp CCCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHHTCEECSCHHHHH-HHCSEEEECCSSHHHHHHHHHSTT
T ss_pred CCeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHH-HcCCEEEEEcCCHHHHHHHHcCch
Confidence 4689999999999999999999999999999999887777777888888888887 7899999999986 688888 7
Q ss_pred hccccccCCccEEEEcCCCCchHHHHHHhhCC-CCCceEeccccCCCCCcccccCCCcceecccccCCChhHHHHHHHHH
Q 044593 107 SIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLP-QDFDILCTHPMFGPESAKSSWENLPFMYDKVRIGNDEERIKRVDKFL 185 (335)
Q Consensus 107 ~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~-~~~~~v~~HPmaG~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~~~v~ 185 (335)
.+. +.++++++|+|+++++....+.+.+.+. .+..|+.. |++|..... ..|...++. +++ ++.++.++
T Consensus 80 ~l~-~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~~~~-pv~g~~~~a--~~g~l~~~~----gg~---~~~~~~~~ 148 (287)
T 3pdu_A 80 GVL-EGIGGGRGYIDMSTVDDETSTAIGAAVTARGGRFLEA-PVSGTKKPA--EDGTLIILA----AGD---QSLFTDAG 148 (287)
T ss_dssp CGG-GTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEC-CEECCHHHH--HHTCEEEEE----EEC---HHHHHHTH
T ss_pred hhh-hcccCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEC-CccCCHHHH--hcCCEEEEE----eCC---HHHHHHHH
Confidence 774 5788999999999987766666655443 35678774 888876421 134433432 333 45778899
Q ss_pred HHHHhcCCEEEEeChHHHHHHHHHhhhhHH
Q 044593 186 DVFAKEGCRMVEMSCFDHDKYAAGSQFVTH 215 (335)
Q Consensus 186 ~l~~~~G~~v~~~~~~eHD~~~A~~s~lph 215 (335)
++|+.+|.+++++++......+.++++...
T Consensus 149 ~ll~~~g~~~~~~g~~g~~~~~Kl~~N~~~ 178 (287)
T 3pdu_A 149 PAFAALGKKCLHLGEVGQGARMKLVVNMIM 178 (287)
T ss_dssp HHHHHHEEEEEECSSTTHHHHHHHHHHHHH
T ss_pred HHHHHhCCCEEEcCCCChHHHHHHHHHHHH
Confidence 999999999999987766777777665543
No 23
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=99.80 E-value=4.5e-18 Score=160.18 Aligned_cols=164 Identities=12% Similarity=0.045 Sum_probs=124.2
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHH-----------hCC--------------CceecChhh
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQ-----------QLN--------------APFFADLND 83 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~-----------~~g--------------~~~~~~~~~ 83 (335)
+..+||+|||+|.||++||..|.++|++|++||++++..+.+. +.| +..++++.+
T Consensus 4 ~~~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~~~~e 83 (319)
T 2dpo_A 4 PAAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAE 83 (319)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHH
T ss_pred CCCceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEeCCHHH
Confidence 4568999999999999999999999999999999987665442 233 245678887
Q ss_pred HhhcCCCEEEEecCchh--HHHHHhhccccccCCccEEEEcCCCCchHHHHHHhhCCCCCceEeccccCCCCCcccccCC
Q 044593 84 LCELHPDVVLLSTSILS--TQSVLKSIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQDFDILCTHPMFGPESAKSSWEN 161 (335)
Q Consensus 84 ~~~~~aDvVIlavp~~~--~~~vl~~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~~~~~v~~HPmaG~~~~~~~~~g 161 (335)
++ ++||+||+|+|.+. ...++.++. +.++++++|++++|+ .....+.+.++...++++.||+.++...+
T Consensus 84 av-~~aDlVieavpe~~~~k~~v~~~l~-~~~~~~~Ii~s~tS~--i~~~~la~~~~~~~r~ig~Hp~~P~~~~~----- 154 (319)
T 2dpo_A 84 AV-EGVVHIQECVPENLDLKRKIFAQLD-SIVDDRVVLSSSSSC--LLPSKLFTGLAHVKQCIVAHPVNPPYYIP----- 154 (319)
T ss_dssp HT-TTEEEEEECCCSCHHHHHHHHHHHH-TTCCSSSEEEECCSS--CCHHHHHTTCTTGGGEEEEEECSSTTTCC-----
T ss_pred HH-hcCCEEEEeccCCHHHHHHHHHHHH-hhCCCCeEEEEeCCC--hHHHHHHHhcCCCCCeEEeecCCchhhcc-----
Confidence 77 89999999999853 567888885 678999999887765 33466777776556899999999776321
Q ss_pred CcceecccccCCChhHHHHHHHHHHHHHhcCCEEEEeChHHHHHH
Q 044593 162 LPFMYDKVRIGNDEERIKRVDKFLDVFAKEGCRMVEMSCFDHDKY 206 (335)
Q Consensus 162 ~~~i~~~~~~~~~~~~~~~~~~v~~l~~~~G~~v~~~~~~eHD~~ 206 (335)
.+-+ ++++.++++.++.+.++++.+|.+++++..+.+..+
T Consensus 155 -lvei----v~g~~t~~e~~~~~~~l~~~lGk~~v~v~~~~~Gfi 194 (319)
T 2dpo_A 155 -LVEL----VPHPETSPATVDRTHALMRKIGQSPVRVLKEIDGFV 194 (319)
T ss_dssp -EEEE----EECTTCCHHHHHHHHHHHHHTTCEEEECSSCCTTTT
T ss_pred -eEEE----eCCCCCCHHHHHHHHHHHHHcCCEEEEECCCcCCch
Confidence 1122 234445678899999999999999999976655543
No 24
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=99.80 E-value=7.8e-22 Score=197.80 Aligned_cols=234 Identities=14% Similarity=0.120 Sum_probs=167.0
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCch-hHHHHHh
Q 044593 28 KSTSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSIL-STQSVLK 106 (335)
Q Consensus 28 ~~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~-~~~~vl~ 106 (335)
...+++|+|||+|+||+++|+.|+..|++|++||++.. .+.+.+.|+... ++++++ .+||+|++|+|.. .+..++.
T Consensus 139 ~l~g~~vgIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~-~~~a~~~g~~~~-~l~e~~-~~aDvV~l~~P~~~~t~~~i~ 215 (529)
T 1ygy_A 139 EIFGKTVGVVGLGRIGQLVAQRIAAFGAYVVAYDPYVS-PARAAQLGIELL-SLDDLL-ARADFISVHLPKTPETAGLID 215 (529)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSC-HHHHHHHTCEEC-CHHHHH-HHCSEEEECCCCSTTTTTCBC
T ss_pred ccCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEECCCCC-hhHHHhcCcEEc-CHHHHH-hcCCEEEECCCCchHHHHHhC
Confidence 45688999999999999999999999999999999874 344666787654 788877 7899999999998 6667665
Q ss_pred h-ccccccCCccEEEEcCCCCchHHHHHHhhCCC------CCceEeccccCCCCCcccccCCCcceecccccCCChhHHH
Q 044593 107 S-IPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQ------DFDILCTHPMFGPESAKSSWENLPFMYDKVRIGNDEERIK 179 (335)
Q Consensus 107 ~-l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~------~~~~v~~HPmaG~~~~~~~~~g~~~i~~~~~~~~~~~~~~ 179 (335)
+ + .+.++++++|+|++.........+.+.+.. ...|++.|||+. ...|...+++++|..-+......+
T Consensus 216 ~~~-~~~~k~g~ilin~arg~iv~~~aL~~al~~g~i~ga~lDv~~~eP~~~----~~L~~~~~vilTPh~~~~t~ea~~ 290 (529)
T 1ygy_A 216 KEA-LAKTKPGVIIVNAARGGLVDEAALADAITGGHVRAAGLDVFATEPCTD----SPLFELAQVVVTPHLGASTAEAQD 290 (529)
T ss_dssp HHH-HTTSCTTEEEEECSCTTSBCHHHHHHHHHTSSEEEEEESSCSSSSCSC----CGGGGCTTEEECSSCSSCBHHHHH
T ss_pred HHH-HhCCCCCCEEEECCCCchhhHHHHHHHHHcCCccEEEEeeccCCCCCC----chHHhCCCEEEccccCCCCHHHHH
Confidence 4 3 246889999999986544433444444433 235789999852 246777788888753222222111
Q ss_pred H--HHHHHHHHHhcCCEE----EEeC-hHHHHHHHHHhhhhHHH-HHHHHHHcCCCCCCCCCcchhhHHHHHHHhhCCCh
Q 044593 180 R--VDKFLDVFAKEGCRM----VEMS-CFDHDKYAAGSQFVTHT-MGRVLERFGVESSPINTKGYETLLDLVDNTKGDSF 251 (335)
Q Consensus 180 ~--~~~v~~l~~~~G~~v----~~~~-~~eHD~~~A~~s~lph~-la~aL~~~~~~~~~~~~~gf~~~~rl~~~ia~~~~ 251 (335)
. ...+++++..++..+ +.++ +++||.+. ||+ ++..+.. ....+.+++|++++++ ++++|
T Consensus 291 ~~~~~~~~~l~~~l~~~~~~~~v~~~~~~~hd~i~------P~l~La~~lg~---~~~qla~g~~~ditri----a~G~~ 357 (529)
T 1ygy_A 291 RAGTDVAESVRLALAGEFVPDAVNVGGGVVNEEVA------PWLDLVRKLGV---LAGVLSDELPVSLSVQ----VRGEL 357 (529)
T ss_dssp HHHHHHHHHHHHHHTTCCCTTBCSCCSTTSCTTTT------THHHHHHHHHH---HHHHTSSSCCSEEEEE----EEEGG
T ss_pred HHHHHHHHHHHHHHcCCCCCcccCCcccccchhhh------hHHHHHHHHHH---HHHHHhCCCceEEEEE----EEeec
Confidence 1 112555666665543 6788 89999876 665 1222211 1124667889999987 89999
Q ss_pred HhHHHHHhhCHhHH-HHHHHHHHHHHHHHHHHH
Q 044593 252 DLYYGLFMYNKNSL-EQLQRLEMAFESIKQQLF 283 (335)
Q Consensus 252 ~lw~~I~~~N~~~~-~~l~~~~~~l~~l~~~l~ 283 (335)
.+ .+++..|+.++ ..|+.+.+.+..+++++.
T Consensus 358 ~~-~~i~~~n~a~l~g~L~~~~~~~~~~vnA~~ 389 (529)
T 1ygy_A 358 AA-EEVEVLRLSALRGLFSAVIEDAVTFVNAPA 389 (529)
T ss_dssp GG-SCCHHHHHHHHHHHTGGGSCTTCCCCCHHH
T ss_pred cc-cCCcHHHHHHHHHhcCCCCCCCccccCHHH
Confidence 99 88999999885 889988888777777744
No 25
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=99.80 E-value=7.9e-19 Score=163.55 Aligned_cols=172 Identities=14% Similarity=0.133 Sum_probs=137.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCch-hHHHHHhhcc
Q 044593 31 SLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSIL-STQSVLKSIP 109 (335)
Q Consensus 31 ~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~-~~~~vl~~l~ 109 (335)
.|||+|||+|.||..+|..|.++|++|++|||+++..+.+.+.|+...+++.+++ + +|+||+|+|.. .+.++++++.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~-~-aDvvi~~vp~~~~~~~v~~~l~ 92 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVA-A-ADLIHITVLDDAQVREVVGELA 92 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHT-T-SSEEEECCSSHHHHHHHHHHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHH-h-CCEEEEECCChHHHHHHHHHHH
Confidence 5799999999999999999999999999999999888778888998888999987 7 99999999965 6788888885
Q ss_pred ccccCCccEEEEcCCCCchHHHHHHhhCC-CCCceEeccccCCCCCcccccCCCcceecccccCCChhHHHHHHHHHHHH
Q 044593 110 FQRLKRSTLFVDVLSVKEFPRNLFLKYLP-QDFDILCTHPMFGPESAKSSWENLPFMYDKVRIGNDEERIKRVDKFLDVF 188 (335)
Q Consensus 110 ~~~l~~~~iVvd~~SvK~~~~~~l~~~l~-~~~~~v~~HPmaG~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~~~v~~l~ 188 (335)
+.++++++|+|+++++....+.+.+.+. .+..|+. +|++|+.... ..+...++. +++ ++.++.++++|
T Consensus 93 -~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~-~pv~g~~~~a--~~g~l~~~~----gg~---~~~~~~~~~ll 161 (296)
T 3qha_A 93 -GHAKPGTVIAIHSTISDTTAVELARDLKARDIHIVD-APVSGGAAAA--ARGELATMV----GAD---REVYERIKPAF 161 (296)
T ss_dssp -TTCCTTCEEEECSCCCHHHHHHHHHHHGGGTCEEEE-CCEESCHHHH--HHTCEEEEE----ECC---HHHHHHHHHHH
T ss_pred -HhcCCCCEEEEeCCCCHHHHHHHHHHHHHcCCEEEe-CCCcCCHHHH--hcCCccEEe----cCC---HHHHHHHHHHH
Confidence 6788999999999988766666655543 3567776 5998876431 234433432 343 45788999999
Q ss_pred HhcCCEEEEeChHHHHHHHHHhhhhHH
Q 044593 189 AKEGCRMVEMSCFDHDKYAAGSQFVTH 215 (335)
Q Consensus 189 ~~~G~~v~~~~~~eHD~~~A~~s~lph 215 (335)
+.+|.+++++++......+.++++...
T Consensus 162 ~~~g~~~~~~g~~g~a~~~Kl~~N~~~ 188 (296)
T 3qha_A 162 KHWAAVVIHAGEPGAGTRMKLARNMLT 188 (296)
T ss_dssp HHHEEEEEEEESTTHHHHHHHHHHHHH
T ss_pred HHHcCCeEEcCChhHHHHHHHHHHHHH
Confidence 999999999977777777877776554
No 26
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=99.79 E-value=2.7e-18 Score=157.04 Aligned_cols=169 Identities=18% Similarity=0.227 Sum_probs=126.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHHcCCe-EEEEcCCCCcHHHHH-hCCCceecChhhHhhcCCCEEEEecCchhHHHHHhhc
Q 044593 31 SLKIAVIGFGNFGQFLAKAFARHHHT-LLVHSRSDHSPAVRQ-QLNAPFFADLNDLCELHPDVVLLSTSILSTQSVLKSI 108 (335)
Q Consensus 31 ~~kI~IIG~G~mG~siA~~L~~~G~~-V~~~dr~~~~~~~a~-~~g~~~~~~~~~~~~~~aDvVIlavp~~~~~~vl~~l 108 (335)
+|||+|||+|.||..++..|.+.|++ |.+|||+++..+.+. ..|+....++.+++ .++|+||+|+|.....++++++
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~Dvvi~av~~~~~~~v~~~l 88 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVN-PYAKLYIVSLKDSAFAELLQGI 88 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSC-SCCSEEEECCCHHHHHHHHHHH
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHh-cCCCEEEEecCHHHHHHHHHHH
Confidence 47999999999999999999999998 899999987665443 45887777887777 7899999999999989999888
Q ss_pred cccccCCccEEEEcCCCCchHHHHHHhhCCCCCceEeccccC---CCCCcccccCCCcceecccccCCChhHHHHHHHHH
Q 044593 109 PFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQDFDILCTHPMF---GPESAKSSWENLPFMYDKVRIGNDEERIKRVDKFL 185 (335)
Q Consensus 109 ~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~~~~~v~~HPma---G~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~~~v~ 185 (335)
. +.++++++|+|+++.... +.+.+.++. .-..||++ |+.. ..+.+.++++. +. +++.++.++
T Consensus 89 ~-~~~~~~~ivv~~s~~~~~--~~l~~~~~~---~~~~~~~~~~~g~~~--~~~~~~~~~v~----~~---~~~~~~~~~ 153 (266)
T 3d1l_A 89 V-EGKREEALMVHTAGSIPM--NVWEGHVPH---YGVFYPMQTFSKQRE--VDFKEIPFFIE----AS---STEDAAFLK 153 (266)
T ss_dssp H-TTCCTTCEEEECCTTSCG--GGSTTTCSS---EEEEEECCCC---CC--CCCTTCCEEEE----ES---SHHHHHHHH
T ss_pred H-hhcCCCcEEEECCCCCch--HHHHHHHHh---ccCcCCceecCCCch--hhcCCCeEEEe----cC---CHHHHHHHH
Confidence 4 568899999999877543 334444433 11245554 4332 12344554441 22 245678899
Q ss_pred HHHHhcCCEEEEeChHH---HHHHHHHhhhhHH
Q 044593 186 DVFAKEGCRMVEMSCFD---HDKYAAGSQFVTH 215 (335)
Q Consensus 186 ~l~~~~G~~v~~~~~~e---HD~~~A~~s~lph 215 (335)
++|+.+|.+++++++++ ||.+++++++++.
T Consensus 154 ~l~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~ 186 (266)
T 3d1l_A 154 AIASTLSNRVYDADSEQRKSLHLAAVFTCNFTN 186 (266)
T ss_dssp HHHHTTCSCEEECCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCcEEEeCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999876 8888999888874
No 27
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=99.78 E-value=3.6e-18 Score=160.68 Aligned_cols=169 Identities=16% Similarity=0.074 Sum_probs=129.0
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcC-CeEEEEcCCC-------CcHHHHHhCCCceec-ChhhHhhcCCCEEEEecCchh
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHH-HTLLVHSRSD-------HSPAVRQQLNAPFFA-DLNDLCELHPDVVLLSTSILS 100 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G-~~V~~~dr~~-------~~~~~a~~~g~~~~~-~~~~~~~~~aDvVIlavp~~~ 100 (335)
++|||+|||+|.||..+|..|.++| ++|++|||++ +..+.+.+.|+ .+ ++.+++ +++|+||+|||+..
T Consensus 23 M~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~--~~~s~~e~~-~~aDvVi~avp~~~ 99 (317)
T 4ezb_A 23 MMTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGV--EPLDDVAGI-ACADVVLSLVVGAA 99 (317)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTC--EEESSGGGG-GGCSEEEECCCGGG
T ss_pred cCCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCC--CCCCHHHHH-hcCCEEEEecCCHH
Confidence 4689999999999999999999999 9999999997 23344556677 55 777777 78999999999999
Q ss_pred HHHHHhhccccccCCccEEEEcCCCCchHHHHHHhhCC-CCCceEeccccCCCCCcccccCCCcceecccccCCChhHHH
Q 044593 101 TQSVLKSIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLP-QDFDILCTHPMFGPESAKSSWENLPFMYDKVRIGNDEERIK 179 (335)
Q Consensus 101 ~~~vl~~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~-~~~~~v~~HPmaG~~~~~~~~~g~~~i~~~~~~~~~~~~~~ 179 (335)
..+.+.++. +.++++++|+|+++++....+.+.+.+. .+..|+. +|++||+... .+...++ ++++..
T Consensus 100 ~~~~~~~i~-~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g~~~~d-~pv~g~~~a~---~g~l~i~----vgg~~~--- 167 (317)
T 4ezb_A 100 TKAVAASAA-PHLSDEAVFIDLNSVGPDTKALAAGAIATGKGSFVE-GAVMARVPPY---AEKVPIL----VAGRRA--- 167 (317)
T ss_dssp HHHHHHHHG-GGCCTTCEEEECCSCCHHHHHHHHHHHHTSSCEEEE-EEECSCSTTT---GGGSEEE----EESTTH---
T ss_pred HHHHHHHHH-hhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEe-ccCCCCchhh---cCCEEEE----EeCChH---
Confidence 888888885 6789999999999998777777766553 3567775 5999976432 3443344 244432
Q ss_pred HHHHHHHHHHhcCCEEEEeCh-HHHHHHHHHhhhhHH
Q 044593 180 RVDKFLDVFAKEGCRMVEMSC-FDHDKYAAGSQFVTH 215 (335)
Q Consensus 180 ~~~~v~~l~~~~G~~v~~~~~-~eHD~~~A~~s~lph 215 (335)
+.++++|+.+|.+++++++ ..-...+.++.+.-.
T Consensus 168 --~~~~~ll~~~g~~v~~~g~~~g~a~~~Kl~~N~~~ 202 (317)
T 4ezb_A 168 --VEVAERLNALGMNLEAVGETPGQASSLKMIRSVMI 202 (317)
T ss_dssp --HHHHHHHHTTTCEEEEEESSTTHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHhCCCeEEeCCCcCHHHHHHHHHHHHH
Confidence 6788999999999999986 455556666555433
No 28
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=99.78 E-value=2e-18 Score=161.00 Aligned_cols=173 Identities=12% Similarity=0.123 Sum_probs=127.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCchhH-HHHHh-hc
Q 044593 31 SLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILST-QSVLK-SI 108 (335)
Q Consensus 31 ~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~~-~~vl~-~l 108 (335)
.+||||||+|.||..+|..|.++||+|++|||+++..+.+.+.|.....++.+++ +++|+||+|+|.+.. .+++. .+
T Consensus 5 s~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~-~~~dvvi~~l~~~~~~~~v~~~~~ 83 (297)
T 4gbj_A 5 SEKIAFLGLGNLGTPIAEILLEAGYELVVWNRTASKAEPLTKLGATVVENAIDAI-TPGGIVFSVLADDAAVEELFSMEL 83 (297)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEC-------CTTTTTTCEECSSGGGGC-CTTCEEEECCSSHHHHHHHSCHHH
T ss_pred CCcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCeEeCCHHHHH-hcCCceeeeccchhhHHHHHHHHH
Confidence 4589999999999999999999999999999999888777788998888999988 899999999998763 44442 34
Q ss_pred cccccCCccEEEEcCCCCchHHHHHHhhCC-CCCceEeccccCCCCCcccccCCCcceecccccCCChhHHHHHHHHHHH
Q 044593 109 PFQRLKRSTLFVDVLSVKEFPRNLFLKYLP-QDFDILCTHPMFGPESAKSSWENLPFMYDKVRIGNDEERIKRVDKFLDV 187 (335)
Q Consensus 109 ~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~-~~~~~v~~HPmaG~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~~~v~~l 187 (335)
. +.++++++|+|++++.....+.+.+.+. .+..|+.+ |+.|...+. ..|...++. +++ .+.+++++++
T Consensus 84 ~-~~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~~~lda-pVsGg~~~a--~~g~l~im~----gG~---~~~~~~~~~~ 152 (297)
T 4gbj_A 84 V-EKLGKDGVHVSMSTISPETSRQLAQVHEWYGAHYVGA-PIFARPEAV--RAKVGNICL----SGN---AGAKERIKPI 152 (297)
T ss_dssp H-HHHCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEC-CEECCHHHH--HHTCCEEEE----EEC---HHHHHHHHHH
T ss_pred H-hhcCCCeEEEECCCCChHHHHHHHHHHHhcCCceecC-CcCCCcccc--ccccceeec----ccc---hhHHHHHHHH
Confidence 2 4678999999999987766666665543 46788875 888876532 145444442 333 4577899999
Q ss_pred HHhcCCEEEEeC-hHHHHHHHHHhhhhHH
Q 044593 188 FAKEGCRMVEMS-CFDHDKYAAGSQFVTH 215 (335)
Q Consensus 188 ~~~~G~~v~~~~-~~eHD~~~A~~s~lph 215 (335)
|+.+|.+++++. +......+.+++++..
T Consensus 153 l~~~g~~i~~~g~~~G~g~~~Kl~~N~~~ 181 (297)
T 4gbj_A 153 VENFVKGVFDFGDDPGAANVIKLAGNFMI 181 (297)
T ss_dssp HHTTCSEEEECCSCTTHHHHHHHHHHHHH
T ss_pred HHHhhCCeEEecCCccHHHHHHHHHHHHH
Confidence 999999988886 4456667777665543
No 29
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=99.78 E-value=3.2e-18 Score=161.18 Aligned_cols=174 Identities=17% Similarity=0.163 Sum_probs=136.0
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCch-hHHHHHh-
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSIL-STQSVLK- 106 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~-~~~~vl~- 106 (335)
..+|||+|||+|.||..+|..|.+.|++|++|||+++..+.+.+.|+....++.+++ +++|+||+|+|.. .+..++.
T Consensus 29 ~~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~-~~aDvVi~~vp~~~~~~~v~~~ 107 (320)
T 4dll_A 29 PYARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAA-RDADIVVSMLENGAVVQDVLFA 107 (320)
T ss_dssp CCCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHH-TTCSEEEECCSSHHHHHHHHTT
T ss_pred cCCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHH-hcCCEEEEECCCHHHHHHHHcc
Confidence 456899999999999999999999999999999999887777777988888998888 8999999999964 6777776
Q ss_pred -hccccccCCccEEEEcCCCCchHHHHHHhhCC-CCCceEeccccCCCCCcccccCCCcceecccccCCChhHHHHHHHH
Q 044593 107 -SIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLP-QDFDILCTHPMFGPESAKSSWENLPFMYDKVRIGNDEERIKRVDKF 184 (335)
Q Consensus 107 -~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~-~~~~~v~~HPmaG~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~~~v 184 (335)
.+. +.++++++|+|+++++....+.+.+.+. .+..|+. .|++|+.... ..|...++. +++ ++.++.+
T Consensus 108 ~~~~-~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~-~pv~g~~~~a--~~g~l~i~~----gg~---~~~~~~~ 176 (320)
T 4dll_A 108 QGVA-AAMKPGSLFLDMASITPREARDHAARLGALGIAHLD-TPVSGGTVGA--EQGTLVIMA----GGK---PADFERS 176 (320)
T ss_dssp TCHH-HHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE-CCEECHHHHH--HHTCEEEEE----ESC---HHHHHHH
T ss_pred hhHH-hhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCEEEe-CCCcCCHhHH--hcCCeeEEe----CCC---HHHHHHH
Confidence 663 5688999999999988766666655442 3567887 4999876431 134433432 343 4577889
Q ss_pred HHHHHhcCCEEEEeChHHHHHHHHHhhhhHH
Q 044593 185 LDVFAKEGCRMVEMSCFDHDKYAAGSQFVTH 215 (335)
Q Consensus 185 ~~l~~~~G~~v~~~~~~eHD~~~A~~s~lph 215 (335)
+++|+.+ .+++++++.....++.+++++..
T Consensus 177 ~~ll~~~-~~~~~~g~~g~a~~~Kl~~N~~~ 206 (320)
T 4dll_A 177 LPLLKVF-GRATHVGPHGSGQLTKLANQMIV 206 (320)
T ss_dssp HHHHHHH-EEEEEEESTTHHHHHHHHHHHHH
T ss_pred HHHHHhc-CCEEEeCCccHHHHHHHHHHHHH
Confidence 9999999 88998877777777777766543
No 30
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=99.76 E-value=2.9e-18 Score=163.88 Aligned_cols=171 Identities=13% Similarity=0.139 Sum_probs=136.2
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCC---CEEEEecCchhHHHHHh
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHP---DVVLLSTSILSTQSVLK 106 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~a---DvVIlavp~~~~~~vl~ 106 (335)
++|||+|||+|.||..+|..|.++|++|++|||+++..+.+.+.|+....++.+++ .++ |+||+|||...+.+++.
T Consensus 21 ~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~-~~a~~~DvVi~~vp~~~v~~vl~ 99 (358)
T 4e21_A 21 QSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAGARSIEEFC-AKLVKPRVVWLMVPAAVVDSMLQ 99 (358)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBCCSSHHHHH-HHSCSSCEEEECSCGGGHHHHHH
T ss_pred cCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEEeCCHHHHH-hcCCCCCEEEEeCCHHHHHHHHH
Confidence 46899999999999999999999999999999999888778888988888888887 677 99999999998899999
Q ss_pred hccccccCCccEEEEcCCCCchHHHHHHhhC-CCCCceEeccccCCCCCcccccCCCcceecccccCCChhHHHHHHHHH
Q 044593 107 SIPFQRLKRSTLFVDVLSVKEFPRNLFLKYL-PQDFDILCTHPMFGPESAKSSWENLPFMYDKVRIGNDEERIKRVDKFL 185 (335)
Q Consensus 107 ~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l-~~~~~~v~~HPmaG~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~~~v~ 185 (335)
++. +.++++++|+|+++++......+.+.+ ..+..|+.+ |++|+..+. ..|. .++ ++++ ++.++.++
T Consensus 100 ~l~-~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~vda-pVsGg~~~a--~~G~-~im----~GG~---~~a~~~~~ 167 (358)
T 4e21_A 100 RMT-PLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYVDV-GTSGGIFGL--ERGY-CLM----IGGE---KQAVERLD 167 (358)
T ss_dssp HHG-GGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEEEE-EEECGGGHH--HHCC-EEE----EESC---HHHHHHTH
T ss_pred HHH-hhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEEeC-CCCCCHHHH--hcCC-eee----ecCC---HHHHHHHH
Confidence 885 678999999999999865545454433 356788874 999887542 2454 333 2444 46788899
Q ss_pred HHHHhcC--------------------CEEEEeChHHHHHHHHHhhhh
Q 044593 186 DVFAKEG--------------------CRMVEMSCFDHDKYAAGSQFV 213 (335)
Q Consensus 186 ~l~~~~G--------------------~~v~~~~~~eHD~~~A~~s~l 213 (335)
++|+.+| ..++++.+......+.++++.
T Consensus 168 ~ll~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~G~~G~g~~~Kl~~n~ 215 (358)
T 4e21_A 168 PVFRTLAPGIGAAPRTPGREKREGTAELGYLHCGPSGAGHFVKMVHNG 215 (358)
T ss_dssp HHHHHHSCCGGGSCCCTTGGGCCSSGGGTEEEEESTTHHHHHHHHHHH
T ss_pred HHHHHhccccccCcccccccccccccccceEEECCccHHHHHHHHHHH
Confidence 9999999 357888777777778776653
No 31
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=99.75 E-value=8.9e-18 Score=155.42 Aligned_cols=166 Identities=13% Similarity=0.073 Sum_probs=126.2
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhC-----------C--------------CceecChhh
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQL-----------N--------------APFFADLND 83 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~-----------g--------------~~~~~~~~~ 83 (335)
|..+||+|||+|.||+.+|..|+++|++|++||++++..+.+.+. | +..++++.+
T Consensus 2 m~~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~ 81 (283)
T 4e12_A 2 TGITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQ 81 (283)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHH
Confidence 346799999999999999999999999999999998765544332 1 345667777
Q ss_pred HhhcCCCEEEEecCch--hHHHHHhhccccccCCccEEEEcCCCCchHHHHHHhhCCCCCceEeccccCCCCCcccccCC
Q 044593 84 LCELHPDVVLLSTSIL--STQSVLKSIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQDFDILCTHPMFGPESAKSSWEN 161 (335)
Q Consensus 84 ~~~~~aDvVIlavp~~--~~~~vl~~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~~~~~v~~HPmaG~~~~~~~~~g 161 (335)
++ ++||+||+|+|.+ ....++.++. +.+++++++++++|+.. ...+.+.++...++++.||+..... +
T Consensus 82 ~~-~~aDlVi~av~~~~~~~~~v~~~l~-~~~~~~~il~s~tS~~~--~~~la~~~~~~~~~ig~h~~~p~~~------~ 151 (283)
T 4e12_A 82 AV-KDADLVIEAVPESLDLKRDIYTKLG-ELAPAKTIFATNSSTLL--PSDLVGYTGRGDKFLALHFANHVWV------N 151 (283)
T ss_dssp HT-TTCSEEEECCCSCHHHHHHHHHHHH-HHSCTTCEEEECCSSSC--HHHHHHHHSCGGGEEEEEECSSTTT------S
T ss_pred Hh-ccCCEEEEeccCcHHHHHHHHHHHH-hhCCCCcEEEECCCCCC--HHHHHhhcCCCcceEEEccCCCccc------C
Confidence 76 7999999999998 6778888884 67889999998877754 3555555555568999999874432 2
Q ss_pred CcceecccccCCChhHHHHHHHHHHHHHhcCCEEEEeChHHHHHHHH
Q 044593 162 LPFMYDKVRIGNDEERIKRVDKFLDVFAKEGCRMVEMSCFDHDKYAA 208 (335)
Q Consensus 162 ~~~i~~~~~~~~~~~~~~~~~~v~~l~~~~G~~v~~~~~~eHD~~~A 208 (335)
..+.++ +.+.++.+.++.+.++++.+|..++.++.+.|+.++.
T Consensus 152 ~lvevv----~~~~t~~~~~~~~~~l~~~~g~~~v~v~~~~~g~i~n 194 (283)
T 4e12_A 152 NTAEVM----GTTKTDPEVYQQVVEFASAIGMVPIELKKEKAGYVLN 194 (283)
T ss_dssp CEEEEE----ECTTSCHHHHHHHHHHHHHTTCEEEECSSCCTTTTHH
T ss_pred ceEEEE----eCCCCCHHHHHHHHHHHHHcCCEEEEEecCCCCEEeh
Confidence 222222 3344556788999999999999999998888876544
No 32
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=99.75 E-value=4.7e-17 Score=152.26 Aligned_cols=159 Identities=12% Similarity=0.088 Sum_probs=123.6
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCchh-HHHHHh-
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILS-TQSVLK- 106 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~-~~~vl~- 106 (335)
..+|||+|||+|.||..+|..|.+.|++|++|||+++..+.+.+.|+....++.+++ +++|+||+|+|... +.+++.
T Consensus 7 ~~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~e~~-~~aDvVi~~vp~~~~~~~v~~~ 85 (306)
T 3l6d_A 7 SFEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAAGAHLCESVKAAL-SASPATIFVLLDNHATHEVLGM 85 (306)
T ss_dssp CCSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTCEECSSHHHHH-HHSSEEEECCSSHHHHHHHHTS
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHH-hcCCEEEEEeCCHHHHHHHhcc
Confidence 356899999999999999999999999999999999877767777888888888887 78999999999875 788886
Q ss_pred -hccccccCCccEEEEcCCCCchHHHHHHhhCC-CCCceEeccccCCCCCcccccCCCcceecccccCCChhHHHHHHHH
Q 044593 107 -SIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLP-QDFDILCTHPMFGPESAKSSWENLPFMYDKVRIGNDEERIKRVDKF 184 (335)
Q Consensus 107 -~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~-~~~~~v~~HPmaG~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~~~v 184 (335)
.+. .++++++|+|+++++....+.+.+.+. .+..|+.+ |++|..... -.+...++. +++ ++.++.+
T Consensus 86 ~~l~--~~~~g~ivid~st~~~~~~~~l~~~~~~~g~~~vda-pv~g~~~~~--~~~~~~i~~----gg~---~~~~~~~ 153 (306)
T 3l6d_A 86 PGVA--RALAHRTIVDYTTNAQDEGLALQGLVNQAGGHYVKG-MIVAYPRNV--GHRESHSIH----TGD---REAFEQH 153 (306)
T ss_dssp TTHH--HHTTTCEEEECCCCCTTHHHHHHHHHHHTTCEEEEE-EEESCGGGT--TCTTCEEEE----EEC---HHHHHHH
T ss_pred cchh--hccCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEec-ccccCcccc--cCCceEEEE----cCC---HHHHHHH
Confidence 553 367899999999998877766655442 45778875 888754211 022223332 333 4678899
Q ss_pred HHHHHhcCCEEEEe--Ch
Q 044593 185 LDVFAKEGCRMVEM--SC 200 (335)
Q Consensus 185 ~~l~~~~G~~v~~~--~~ 200 (335)
+++|+.+|.+++++ ++
T Consensus 154 ~~ll~~lg~~~~~~~~g~ 171 (306)
T 3l6d_A 154 RALLEGLAGHTVFLPWDE 171 (306)
T ss_dssp HHHHHTTCSEEEECCHHH
T ss_pred HHHHHHhcCCEEEecCCC
Confidence 99999998899999 64
No 33
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=99.73 E-value=4.2e-17 Score=150.95 Aligned_cols=174 Identities=18% Similarity=0.205 Sum_probs=130.2
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCchh-HHHHHh--
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILS-TQSVLK-- 106 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~-~~~vl~-- 106 (335)
++|||+|||+|.||..++..|.+.|++|++|| +++..+...+.|+....++.+++ .++|+||+|+|... +..++.
T Consensus 2 ~~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~~g~~~~~~~~~~~-~~~D~vi~~vp~~~~~~~v~~~~ 79 (295)
T 1yb4_A 2 NAMKLGFIGLGIMGSPMAINLARAGHQLHVTT-IGPVADELLSLGAVNVETARQVT-EFADIIFIMVPDTPQVEDVLFGE 79 (295)
T ss_dssp --CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SSCCCHHHHTTTCBCCSSHHHHH-HTCSEEEECCSSHHHHHHHHHST
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CHHHHHHHHHcCCcccCCHHHHH-hcCCEEEEECCCHHHHHHHHhCc
Confidence 35799999999999999999999999999999 88776666666887777888877 79999999998876 678887
Q ss_pred -hccccccCCccEEEEcCCCCchHHHHHHhhCCC-CCceEeccccCCCCCcccccCCCcceecccccCCChhHHHHHHHH
Q 044593 107 -SIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQ-DFDILCTHPMFGPESAKSSWENLPFMYDKVRIGNDEERIKRVDKF 184 (335)
Q Consensus 107 -~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~-~~~~v~~HPmaG~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~~~v 184 (335)
++. +.++++++|+|+++......+.+.+.++. +.+|+. .|+.+..... ..|...++. +.+ .+.++.+
T Consensus 80 ~~l~-~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~-~p~~~~~~~a--~~g~~~~~~----~~~---~~~~~~~ 148 (295)
T 1yb4_A 80 HGCA-KTSLQGKTIVDMSSISPIETKRFAQRVNEMGADYLD-APVSGGEIGA--REGTLSIMV----GGE---QKVFDRV 148 (295)
T ss_dssp TSST-TSCCTTEEEEECSCCCHHHHHHHHHHHHTTTEEEEE-CCEESHHHHH--HHTCEEEEE----ESC---HHHHHHH
T ss_pred hhHh-hcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEE-ccCCCCHHHH--HcCCeEEEE----CCC---HHHHHHH
Confidence 674 56889999999988764444555555432 456664 4777643211 123322332 332 4567889
Q ss_pred HHHHHhcCCEEEEeChHHHHHHHHHhhhhHHH
Q 044593 185 LDVFAKEGCRMVEMSCFDHDKYAAGSQFVTHT 216 (335)
Q Consensus 185 ~~l~~~~G~~v~~~~~~eHD~~~A~~s~lph~ 216 (335)
+++|+.+|.+++++++..++.+++++++..+.
T Consensus 149 ~~ll~~~g~~~~~~~~~~~~~~~Kl~~n~~~~ 180 (295)
T 1yb4_A 149 KPLFDILGKNITLVGGNGDGQTCKVANQIIVA 180 (295)
T ss_dssp HHHHHHHEEEEEEEESTTHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCEEEeCCCCHHHHHHHHHHHHHH
Confidence 99999999999999888899888888776553
No 34
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=99.73 E-value=3e-17 Score=152.35 Aligned_cols=173 Identities=18% Similarity=0.223 Sum_probs=130.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCc-hhHHHHH---h
Q 044593 31 SLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSI-LSTQSVL---K 106 (335)
Q Consensus 31 ~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~-~~~~~vl---~ 106 (335)
.|||+|||+|.||..++..|.+.|++|++|||+++..+...+.|+....++.+++ .++|+||+|+|. ..+..++ +
T Consensus 5 ~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~D~vi~~v~~~~~~~~~~~~~~ 83 (299)
T 1vpd_A 5 TMKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIA-EQCDVIITMLPNSPHVKEVALGEN 83 (299)
T ss_dssp -CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHH-HHCSEEEECCSSHHHHHHHHHSTT
T ss_pred cceEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHH-hCCCEEEEECCCHHHHHHHHhCcc
Confidence 4799999999999999999999999999999998877667777887777888877 789999999994 4577787 5
Q ss_pred hccccccCCccEEEEcCCCCchHHHHHHhhCC-CCCceEeccccCCCCCcccccCCCcceecccccCCChhHHHHHHHHH
Q 044593 107 SIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLP-QDFDILCTHPMFGPESAKSSWENLPFMYDKVRIGNDEERIKRVDKFL 185 (335)
Q Consensus 107 ~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~-~~~~~v~~HPmaG~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~~~v~ 185 (335)
++. +.++++++|+|+++......+.+.+.++ .+..|+.. |++|..... ..+...++. +++ .+.++.++
T Consensus 84 ~l~-~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~~-pv~~~~~~~--~~~~~~~~~----~~~---~~~~~~~~ 152 (299)
T 1vpd_A 84 GII-EGAKPGTVLIDMSSIAPLASREISDALKAKGVEMLDA-PVSGGEPKA--IDGTLSVMV----GGD---KAIFDKYY 152 (299)
T ss_dssp CHH-HHCCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEEC-CEESHHHHH--HHTCEEEEE----ESC---HHHHHHHH
T ss_pred hHh-hcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEEe-cCCCCHhHH--hcCCEEEEe----CCC---HHHHHHHH
Confidence 664 5678999999998876544556655553 35677765 887754321 122222332 332 45678899
Q ss_pred HHHHhcCCEEEEeChHHHHHHHHHhhhhHH
Q 044593 186 DVFAKEGCRMVEMSCFDHDKYAAGSQFVTH 215 (335)
Q Consensus 186 ~l~~~~G~~v~~~~~~eHD~~~A~~s~lph 215 (335)
++|+.+|.+++++++..+..+++++++.-.
T Consensus 153 ~ll~~~g~~~~~~~~~~~~~~~Kl~~n~~~ 182 (299)
T 1vpd_A 153 DLMKAMAGSVVHTGDIGAGNVTKLANQVIV 182 (299)
T ss_dssp HHHHTTEEEEEEEESTTHHHHHHHHHHHHH
T ss_pred HHHHHHcCCeEEeCCcCHHHHHHHHHHHHH
Confidence 999999999999988888888877665543
No 35
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=99.73 E-value=2e-17 Score=163.51 Aligned_cols=173 Identities=11% Similarity=0.076 Sum_probs=130.9
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCC---C--ceecChhhHhhc---CCCEEEEecCch-
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLN---A--PFFADLNDLCEL---HPDVVLLSTSIL- 99 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g---~--~~~~~~~~~~~~---~aDvVIlavp~~- 99 (335)
+.+|+|+|||+|.||..+|..|.++|++|++|||+++..+.+.+.+ . ..+.++.+++ + ++|+||+|||..
T Consensus 2 ~~~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~g~~i~~~~s~~e~v-~~l~~aDvVil~Vp~~~ 80 (484)
T 4gwg_A 2 NAQADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVVGAQSLKEMV-SKLKKPRRIILLVKAGQ 80 (484)
T ss_dssp -CCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHH-HTBCSSCEEEECSCSSH
T ss_pred CCCCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcccCCCceeccCCHHHHH-hhccCCCEEEEecCChH
Confidence 3568999999999999999999999999999999998776665543 2 2356788876 4 599999999996
Q ss_pred hHHHHHhhccccccCCccEEEEcCCCCchHHHHHHhhC-CCCCceEeccccCCCCCcccccCCCcceecccccCCChhHH
Q 044593 100 STQSVLKSIPFQRLKRSTLFVDVLSVKEFPRNLFLKYL-PQDFDILCTHPMFGPESAKSSWENLPFMYDKVRIGNDEERI 178 (335)
Q Consensus 100 ~~~~vl~~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l-~~~~~~v~~HPmaG~~~~~~~~~g~~~i~~~~~~~~~~~~~ 178 (335)
.+.++++++. +.++++++|+|+++++......+.+.+ ..+.+|+.+ |++|.+.+. ..|. .++. +++ +
T Consensus 81 ~v~~vl~~l~-~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd~-pVsGg~~gA--~~G~-~im~----GG~---~ 148 (484)
T 4gwg_A 81 AVDDFIEKLV-PLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGS-GVSGGEEGA--RYGP-SLMP----GGN---K 148 (484)
T ss_dssp HHHHHHHHHG-GGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEE-EEESHHHHH--HHCC-EEEE----EEC---G
T ss_pred HHHHHHHHHH-HhcCCCCEEEEcCCCCchHHHHHHHHHHhhccccccC-CccCCHHHH--hcCC-eeec----CCC---H
Confidence 6888999885 689999999999998764434333333 346789885 999877532 2454 3332 333 3
Q ss_pred HHHHHHHHHHHhcCCEE-------EEeChHHHHHHHHHhhhhH
Q 044593 179 KRVDKFLDVFAKEGCRM-------VEMSCFDHDKYAAGSQFVT 214 (335)
Q Consensus 179 ~~~~~v~~l~~~~G~~v-------~~~~~~eHD~~~A~~s~lp 214 (335)
+.++.++++|+.+|.++ +++.+......+.++++.-
T Consensus 149 ea~~~v~pll~~ig~~v~~~~~~~~~~G~~Gag~~vKmv~N~i 191 (484)
T 4gwg_A 149 EAWPHIKTIFQGIAAKVGTGEPCCDWVGDEGAGHFVKMVHNGI 191 (484)
T ss_dssp GGHHHHHHHHHHHSCBCTTSCBSBCCCEETTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCcccCCCceEEEECCccHHHHHHHHHHHH
Confidence 56788999999999987 7787777777788776553
No 36
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=99.71 E-value=3.8e-16 Score=146.23 Aligned_cols=160 Identities=14% Similarity=0.168 Sum_probs=120.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecC-chhHHHHHhhcc
Q 044593 31 SLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTS-ILSTQSVLKSIP 109 (335)
Q Consensus 31 ~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp-~~~~~~vl~~l~ 109 (335)
.|||+|||+|.||..+|..|.+.|++|++|||+++..+.+.+.|+....++.+++ .++|+||+|+| +..+..++..+.
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~DvVi~av~~~~~~~~v~~~~~ 108 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARLGRTPAEVV-STCDITFACVSDPKAAKDLVLGPS 108 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHHTTCEECSCHHHHH-HHCSEEEECCSSHHHHHHHHHSTT
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHcCCEEcCCHHHHH-hcCCEEEEeCCCHHHHHHHHcCch
Confidence 4899999999999999999999999999999998877666777887777777777 78999999999 667888887642
Q ss_pred --ccccCCccEEEEcCCCCchHHHHHHhhCC-CCCceEeccccCCCCCcccccCCCcceecccccCCChhHHHHHHHHHH
Q 044593 110 --FQRLKRSTLFVDVLSVKEFPRNLFLKYLP-QDFDILCTHPMFGPESAKSSWENLPFMYDKVRIGNDEERIKRVDKFLD 186 (335)
Q Consensus 110 --~~~l~~~~iVvd~~SvK~~~~~~l~~~l~-~~~~~v~~HPmaG~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~~~v~~ 186 (335)
.+.++++++|+|++++.....+.+.+.++ .+..|+++ |++|..... -.+...++. +++ .+.++.+++
T Consensus 109 ~~~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~~~~~v~~-p~~g~~~~~--~~g~~~~~~----~g~---~~~~~~v~~ 178 (316)
T 2uyy_A 109 GVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEA-PVSGNQQLS--NDGMLVILA----AGD---RGLYEDCSS 178 (316)
T ss_dssp CGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEC-CEESCHHHH--HHTCEEEEE----EEC---HHHHHHTHH
T ss_pred hHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEc-CccCChhHH--hhCCEEEEe----CCC---HHHHHHHHH
Confidence 14578899999999887655566655553 35678876 787754321 133322332 232 356788899
Q ss_pred HHHhcCCEEEEeChH
Q 044593 187 VFAKEGCRMVEMSCF 201 (335)
Q Consensus 187 l~~~~G~~v~~~~~~ 201 (335)
+|+.+|.+++++++.
T Consensus 179 ll~~~g~~~~~~~~~ 193 (316)
T 2uyy_A 179 CFQAMGKTSFFLGEV 193 (316)
T ss_dssp HHHHHEEEEEECSST
T ss_pred HHHHhcCCEEEeCCC
Confidence 999999988888653
No 37
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=99.70 E-value=6e-17 Score=160.47 Aligned_cols=174 Identities=14% Similarity=0.138 Sum_probs=129.7
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhC----CCceecChhhHhhcC---CCEEEEecCch-
Q 044593 28 KSTSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQL----NAPFFADLNDLCELH---PDVVLLSTSIL- 99 (335)
Q Consensus 28 ~~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~----g~~~~~~~~~~~~~~---aDvVIlavp~~- 99 (335)
.|..++|+|||+|.||+.+|..|.++|++|++|||+++..+...+. |+..+.++.+++ .+ +|+||+|||..
T Consensus 12 ~~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~~~~~~l~~~~~~~gi~~~~s~~e~v-~~l~~aDvVil~Vp~~~ 90 (480)
T 2zyd_A 12 HMSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLVPYYTVKEFV-ESLETPRRILLMVKAGA 90 (480)
T ss_dssp ---CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHSTTSCEEECSSHHHHH-HTBCSSCEEEECSCSSS
T ss_pred ccCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHhhCCCCCeEEeCCHHHHH-hCCCCCCEEEEECCCHH
Confidence 3567899999999999999999999999999999998776544443 677777888876 55 99999999994
Q ss_pred hHHHHHhhccccccCCccEEEEcCCCCchHHHHHHhhCC-CCCceEeccccCCCCCcccccCCCcceecccccCCChhHH
Q 044593 100 STQSVLKSIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLP-QDFDILCTHPMFGPESAKSSWENLPFMYDKVRIGNDEERI 178 (335)
Q Consensus 100 ~~~~vl~~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~-~~~~~v~~HPmaG~~~~~~~~~g~~~i~~~~~~~~~~~~~ 178 (335)
.+.++++++. +.++++++|+|++++.......+.+.++ .+..|+++ |+.|.+... ..|. .++. +++ +
T Consensus 91 ~v~~vl~~l~-~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g~~~v~~-pv~gg~~~a--~~g~-~i~~----gg~---~ 158 (480)
T 2zyd_A 91 GTDAAIDSLK-PYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGT-GVSGGEEGA--LKGP-SIMP----GGQ---K 158 (480)
T ss_dssp HHHHHHHHHG-GGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEE-EEESHHHHH--HHCC-EEEE----ESC---H
T ss_pred HHHHHHHHHH-hhcCCCCEEEECCCCCHHHHHHHHHHHHHCCCCeeCC-ccccCHhHH--hcCC-eEEe----cCC---H
Confidence 7899999885 6788999999999887554444544443 35678864 888766421 1343 3332 333 4
Q ss_pred HHHHHHHHHHHhcCCE-------EEEeChHHHHHHHHHhhhhH
Q 044593 179 KRVDKFLDVFAKEGCR-------MVEMSCFDHDKYAAGSQFVT 214 (335)
Q Consensus 179 ~~~~~v~~l~~~~G~~-------v~~~~~~eHD~~~A~~s~lp 214 (335)
+.++.++++|+.+|.+ +.++++......+.++.+..
T Consensus 159 ~~~~~v~~ll~~~g~~~~dGe~~v~~~g~~G~g~~~Kl~~N~~ 201 (480)
T 2zyd_A 159 EAYELVAPILTKIAAVAEDGEPCVTYIGADGAGHYVKMVHNGI 201 (480)
T ss_dssp HHHHHHHHHHHHHSCBCTTSCBSBCCCBSTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccccCCCceEEEECCccHHHHHHHHHHHH
Confidence 6788999999999998 67787776666776655443
No 38
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=99.70 E-value=9.5e-16 Score=142.52 Aligned_cols=176 Identities=15% Similarity=0.134 Sum_probs=123.7
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCcee------------cChhhHhh--cCCCEEEEe
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFF------------ADLNDLCE--LHPDVVLLS 95 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~------------~~~~~~~~--~~aDvVIla 95 (335)
++|||+|||+|.||+.+|..|.++|++|++|||+++..+...+.|+... .+..++.. .++|+||+|
T Consensus 2 ~~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 81 (316)
T 2ew2_A 2 NAMKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIAL 81 (316)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEEC
T ss_pred CCCeEEEECcCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEEE
Confidence 4589999999999999999999999999999999877665555554321 13333330 289999999
Q ss_pred cCchhHHHHHhhccccccCCccEEEEcCCCCchHHHHHHhhCCCCCceEeccccCCCCCc-c----cccCCCcceecccc
Q 044593 96 TSILSTQSVLKSIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQDFDILCTHPMFGPESA-K----SSWENLPFMYDKVR 170 (335)
Q Consensus 96 vp~~~~~~vl~~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~~~~~v~~HPmaG~~~~-~----~~~~g~~~i~~~~~ 170 (335)
+|...+.++++++. +.++++++|+++++.-. ..+.+.+.++.. +++++|++.+.... + ....|.+.+..
T Consensus 82 v~~~~~~~v~~~l~-~~l~~~~~iv~~~~g~~-~~~~l~~~~~~~-~vi~g~~~~~~~~~~p~~~~~~~~g~~~i~~--- 155 (316)
T 2ew2_A 82 TKAQQLDAMFKAIQ-PMITEKTYVLCLLNGLG-HEDVLEKYVPKE-NILVGITMWTAGLEGPGRVKLLGDGEIELEN--- 155 (316)
T ss_dssp SCHHHHHHHHHHHG-GGCCTTCEEEECCSSSC-THHHHTTTSCGG-GEEEEEECCCCEEEETTEEEECSCCCEEEEE---
T ss_pred eccccHHHHHHHHH-HhcCCCCEEEEecCCCC-cHHHHHHHcCCc-cEEEEEeeeeeEEcCCCEEEEecCCcEEEee---
Confidence 99999999999985 67889999999864322 346677666643 67777776655432 1 11234333321
Q ss_pred cCCChhHHHHHHHHHHHHHhcCCEEEEeChHHHHHHHHHhhhh
Q 044593 171 IGNDEERIKRVDKFLDVFAKEGCRMVEMSCFDHDKYAAGSQFV 213 (335)
Q Consensus 171 ~~~~~~~~~~~~~v~~l~~~~G~~v~~~~~~eHD~~~A~~s~l 213 (335)
....+.+..+.++++|+..|.+++..+......+..++.+.
T Consensus 156 --~~~~~~~~~~~~~~ll~~~g~~~~~~~d~~~~~~~Kl~~N~ 196 (316)
T 2ew2_A 156 --IDPSGKKFALEVVDVFQKAGLNPSYSSNVRYSIWRKACVNG 196 (316)
T ss_dssp --SSGGGHHHHHHHHHHHHHTTCCEEECTTHHHHHHHHHHHHT
T ss_pred --cCCCccHHHHHHHHHHHhCCCCcEEchhHHHHHHHHHHHhh
Confidence 12334567889999999999988888766666677665543
No 39
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=99.69 E-value=1.9e-16 Score=147.21 Aligned_cols=152 Identities=18% Similarity=0.161 Sum_probs=113.7
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhC-------CCceecChhhHhhcCCCEEEEecCchh--
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQL-------NAPFFADLNDLCELHPDVVLLSTSILS-- 100 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~-------g~~~~~~~~~~~~~~aDvVIlavp~~~-- 100 (335)
..+||+|||+|.||++||..|+ +|++|++||++++..+.+.+. ++...+++.+ + ++||+||.|+|.+.
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~~~~~~~~~~l~~~~~~~i~~~~~~~~-~-~~aDlVieavpe~~~v 87 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSEKALEAAREQIPEELLSKIEFTTTLEK-V-KDCDIVMEAVFEDLNT 87 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHSCGGGGGGEEEESSCTT-G-GGCSEEEECCCSCHHH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCHHHHHHHHHHHHHHHhCCeEEeCCHHH-H-cCCCEEEEcCcCCHHH
Confidence 4689999999999999999999 999999999999877766665 5666777776 5 78999999999987
Q ss_pred HHHHHhhccccccCCccEEE-EcCCCCchHHHHHHhhCCCCCceEeccccCCCCCcccccCCCcceecccccCCChhHHH
Q 044593 101 TQSVLKSIPFQRLKRSTLFV-DVLSVKEFPRNLFLKYLPQDFDILCTHPMFGPESAKSSWENLPFMYDKVRIGNDEERIK 179 (335)
Q Consensus 101 ~~~vl~~l~~~~l~~~~iVv-d~~SvK~~~~~~l~~~l~~~~~~v~~HPmaG~~~~~~~~~g~~~i~~~~~~~~~~~~~~ 179 (335)
...++.++. . + ++++++ |++|++. ..+.+.+....++++.||+..+.. +..+.+ ++++.++++
T Consensus 88 k~~l~~~l~-~-~-~~~IlasntSti~~---~~~a~~~~~~~r~~G~Hf~~Pv~~------~~lvei----v~g~~t~~~ 151 (293)
T 1zej_A 88 KVEVLREVE-R-L-TNAPLCSNTSVISV---DDIAERLDSPSRFLGVHWMNPPHV------MPLVEI----VISRFTDSK 151 (293)
T ss_dssp HHHHHHHHH-T-T-CCSCEEECCSSSCH---HHHHTTSSCGGGEEEEEECSSTTT------CCEEEE----EECTTCCHH
T ss_pred HHHHHHHHh-c-C-CCCEEEEECCCcCH---HHHHHHhhcccceEeEEecCcccc------CCEEEE----ECCCCCCHH
Confidence 356667774 3 4 898886 4555533 445554444457999999984332 222222 234445677
Q ss_pred HHHHHHHHHHhcCCEEEEeCh
Q 044593 180 RVDKFLDVFAKEGCRMVEMSC 200 (335)
Q Consensus 180 ~~~~v~~l~~~~G~~v~~~~~ 200 (335)
.++.+.++++.+|.+++++..
T Consensus 152 ~~~~~~~l~~~lGk~~v~v~d 172 (293)
T 1zej_A 152 TVAFVEGFLRELGKEVVVCKG 172 (293)
T ss_dssp HHHHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHHHHcCCeEEEecc
Confidence 899999999999999999874
No 40
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=99.69 E-value=8.7e-17 Score=148.24 Aligned_cols=168 Identities=17% Similarity=0.136 Sum_probs=124.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCchh-HHHHHhhcc
Q 044593 31 SLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILS-TQSVLKSIP 109 (335)
Q Consensus 31 ~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~-~~~vl~~l~ 109 (335)
+|||+|||+|.||..++..|.+ |++|++|||+++..+.+.+.|+...+ +.+++ .++|+||+|+|... +..+++++.
T Consensus 1 M~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~g~~~~~-~~~~~-~~~D~vi~~v~~~~~~~~v~~~l~ 77 (289)
T 2cvz_A 1 MEKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEEFGSEAV-PLERV-AEARVIFTCLPTTREVYEVAEALY 77 (289)
T ss_dssp -CCEEEECCSTTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHHHCCEEC-CGGGG-GGCSEEEECCSSHHHHHHHHHHHT
T ss_pred CCeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHCCCcccC-HHHHH-hCCCEEEEeCCChHHHHHHHHHHH
Confidence 3689999999999999999999 99999999998876655555766555 66666 78999999999875 788888874
Q ss_pred ccccCCccEEEEcCCCCchHHHHHHhhCCC-CCceEeccccCCCCCcccccCCCcceecccccCCChhHHHHHHHHHHHH
Q 044593 110 FQRLKRSTLFVDVLSVKEFPRNLFLKYLPQ-DFDILCTHPMFGPESAKSSWENLPFMYDKVRIGNDEERIKRVDKFLDVF 188 (335)
Q Consensus 110 ~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~-~~~~v~~HPmaG~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~~~v~~l~ 188 (335)
+.++++++|+|+++......+.+.+.++. +..|+.. |++|+.... ..|...++. +.+ .+.++.++++|
T Consensus 78 -~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~~-p~~~~~~~~--~~g~~~~~~----~~~---~~~~~~~~~ll 146 (289)
T 2cvz_A 78 -PYLREGTYWVDATSGEPEASRRLAERLREKGVTYLDA-PVSGGTSGA--EAGTLTVML----GGP---EEAVERVRPFL 146 (289)
T ss_dssp -TTCCTTEEEEECSCCCHHHHHHHHHHHHTTTEEEEEC-CEESHHHHH--HHTCEEEEE----ESC---HHHHHHHGGGC
T ss_pred -hhCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEe-cCCCChhHH--hhCCeEEEE----CCC---HHHHHHHHHHH
Confidence 56889999999988766555666665543 4577775 887655321 134333332 232 45678889999
Q ss_pred HhcCCEEEEeChHHHHHHHHHhhhh
Q 044593 189 AKEGCRMVEMSCFDHDKYAAGSQFV 213 (335)
Q Consensus 189 ~~~G~~v~~~~~~eHD~~~A~~s~l 213 (335)
.+|.+++++++..+..++.++...
T Consensus 147 -~~g~~~~~~~~~~~~~~~k~~~n~ 170 (289)
T 2cvz_A 147 -AYAKKVVHVGPVGAGHAVKAINNA 170 (289)
T ss_dssp -TTEEEEEEEESTTHHHHHHHHHHH
T ss_pred -hhcCCeEEcCCCcHHHHHHHHHHH
Confidence 999888888777777776665443
No 41
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=99.69 E-value=2e-16 Score=140.11 Aligned_cols=153 Identities=15% Similarity=0.247 Sum_probs=115.0
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCchhHHHHHhhcc
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILSTQSVLKSIP 109 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~~~~vl~~l~ 109 (335)
..|||+|||+|.||+++|..|.+.|++|++|||+++ .+ .++|+||+|+|...+.++++++.
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~------------------~~-~~aD~vi~av~~~~~~~v~~~l~ 78 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ------------------AT-TLGEIVIMAVPYPALAALAKQYA 78 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC------------------CS-SCCSEEEECSCHHHHHHHHHHTH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH------------------Hh-ccCCEEEEcCCcHHHHHHHHHHH
Confidence 478999999999999999999999999999999875 23 68999999999888999999985
Q ss_pred ccccCCccEEEEcCC-------------CCchHHHHHHhhCCCCCceEe-ccccCCCCCcccccCC-CcceecccccCCC
Q 044593 110 FQRLKRSTLFVDVLS-------------VKEFPRNLFLKYLPQDFDILC-THPMFGPESAKSSWEN-LPFMYDKVRIGND 174 (335)
Q Consensus 110 ~~~l~~~~iVvd~~S-------------vK~~~~~~l~~~l~~~~~~v~-~HPmaG~~~~~~~~~g-~~~i~~~~~~~~~ 174 (335)
+.++ +++|+|+++ ++..+.+.+++.++ +.+++. +||+++|..+.....+ .+..+. ++++
T Consensus 79 -~~~~-~~~vi~~~~g~~~~~~~~l~~~~~~~~~~~l~~~l~-~~~vv~~~~~~~~p~~~~~~~~g~~~~~~~---~~g~ 152 (209)
T 2raf_A 79 -TQLK-GKIVVDITNPLNFDTWDDLVVPADSSAAQELQQQLP-DSQVLKAFNTTFAATLQSGQVNGKEPTTVL---VAGN 152 (209)
T ss_dssp -HHHT-TSEEEECCCCBCTTTSSSBSSCTTCCHHHHHHHHCT-TSEEEECSTTSCHHHHHHSEETTTEECEEE---EEES
T ss_pred -HhcC-CCEEEEECCCCCccccccccCCCCCcHHHHHHHHCC-CCcEEEeeecccHhhccccccCCCCCceeE---EcCC
Confidence 5677 899999977 33333677888886 457887 8998888764322233 222211 1222
Q ss_pred hhHHHHHHHHHHHHHhcCCEEEEeChHHHHHHHHH
Q 044593 175 EERIKRVDKFLDVFAKEGCRMVEMSCFDHDKYAAG 209 (335)
Q Consensus 175 ~~~~~~~~~v~~l~~~~G~~v~~~~~~eHD~~~A~ 209 (335)
+.+..+.++++|+.+|++++.+++-+...++..
T Consensus 153 --~~~~~~~v~~ll~~~G~~~~~~~~i~~a~~~K~ 185 (209)
T 2raf_A 153 --DDSAKQRFTRALADSPLEVKDAGKLKRARELEA 185 (209)
T ss_dssp --CHHHHHHHHHHTTTSSCEEEEEESGGGHHHHHH
T ss_pred --CHHHHHHHHHHHHHcCCceEeCCCHhHHHHhcc
Confidence 345778899999999999999987655555554
No 42
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=99.68 E-value=1.3e-16 Score=158.58 Aligned_cols=171 Identities=14% Similarity=0.094 Sum_probs=129.3
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHh-----CCCceecChhhHhhcC---CCEEEEecCch-h
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQ-----LNAPFFADLNDLCELH---PDVVLLSTSIL-S 100 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~-----~g~~~~~~~~~~~~~~---aDvVIlavp~~-~ 100 (335)
...+|+|||+|.||+.+|..|.++|++|++|||+++..+...+ .|+..+.++.+++ .. +|+||+|||.. .
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~~~gi~~~~s~~e~v-~~l~~aDvVil~Vp~~~~ 87 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQSKVDHFLANEAKGKSIIGATSIEDFI-SKLKRPRKVMLLVKAGAP 87 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSHHHHHHHHTTTTTSSEECCSSHHHHH-HTSCSSCEEEECCCSSHH
T ss_pred CCCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHcccccCCCeEEeCCHHHHH-hcCCCCCEEEEEcCChHH
Confidence 3568999999999999999999999999999999987766655 5777777888876 55 99999999995 7
Q ss_pred HHHHHhhccccccCCccEEEEcCCCCchHHHHHHhhCC-CCCceEeccccCCCCCcccccCCCcceecccccCCChhHHH
Q 044593 101 TQSVLKSIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLP-QDFDILCTHPMFGPESAKSSWENLPFMYDKVRIGNDEERIK 179 (335)
Q Consensus 101 ~~~vl~~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~-~~~~~v~~HPmaG~~~~~~~~~g~~~i~~~~~~~~~~~~~~ 179 (335)
+.++++++. +.++++++|+|++++.......+.+.+. .+..|++. |++|.+.+. ..|. .++. +++ ++
T Consensus 88 v~~vl~~l~-~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g~~~v~~-pVsgg~~~a--~~G~-~im~----gg~---~e 155 (497)
T 2p4q_A 88 VDALINQIV-PLLEKGDIIIDGGNSHFPDSNRRYEELKKKGILFVGS-GVSGGEEGA--RYGP-SLMP----GGS---EE 155 (497)
T ss_dssp HHHHHHHHG-GGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEE-EEESHHHHH--HHCC-EEEE----EEC---GG
T ss_pred HHHHHHHHH-HhCCCCCEEEECCCCChhHHHHHHHHHHHcCCceeCC-CcccChhHh--hcCC-eEEe----cCC---HH
Confidence 899999885 6789999999999887654444544443 35678864 888766431 1344 2332 233 34
Q ss_pred HHHHHHHHHHhcCCE------EEEeChHHHHHHHHHhhhh
Q 044593 180 RVDKFLDVFAKEGCR------MVEMSCFDHDKYAAGSQFV 213 (335)
Q Consensus 180 ~~~~v~~l~~~~G~~------v~~~~~~eHD~~~A~~s~l 213 (335)
.++.++++|+.+|.+ ++++++......+.++.+.
T Consensus 156 ~~~~v~~ll~~~g~~~dGe~~v~~vg~~G~g~~~Kl~~N~ 195 (497)
T 2p4q_A 156 AWPHIKNIFQSISAKSDGEPCCEWVGPAGAGHYVKMVHNG 195 (497)
T ss_dssp GHHHHHHHHHHHSCEETTEESCCCCEETTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCccCCCCceEEECCccHHHHHHHHHHH
Confidence 678889999999998 6777776666666665544
No 43
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=99.68 E-value=2.5e-16 Score=146.25 Aligned_cols=173 Identities=16% Similarity=0.158 Sum_probs=128.7
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCchh-HHHHHh--
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILS-TQSVLK-- 106 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~-~~~vl~-- 106 (335)
+.|||+|||+|.||..++..|.+.|++|++|||+++..+...+.|+....++.+++ .++|+||+|+|... +..++.
T Consensus 3 ~~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~D~vi~~vp~~~~~~~v~~~~ 81 (301)
T 3cky_A 3 KSIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVAQGAQACENNQKVA-AASDIIFTSLPNAGIVETVMNGP 81 (301)
T ss_dssp -CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHTTTCEECSSHHHHH-HHCSEEEECCSSHHHHHHHHHST
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeecCCHHHHH-hCCCEEEEECCCHHHHHHHHcCc
Confidence 35799999999999999999999999999999998777666666887777888877 78999999998654 777774
Q ss_pred -hccccccCCccEEEEcCCCCchHHHHHHhhCC-CCCceEeccccCCCCCcccccCCCcceecccccCCChhHHHHHHHH
Q 044593 107 -SIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLP-QDFDILCTHPMFGPESAKSSWENLPFMYDKVRIGNDEERIKRVDKF 184 (335)
Q Consensus 107 -~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~-~~~~~v~~HPmaG~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~~~v 184 (335)
++. +.++++++|+++++......+.+.+.++ .+.+|+. +|+.+..... ..|...++. +.+ .+.++.+
T Consensus 82 ~~l~-~~l~~~~~vv~~~~~~~~~~~~l~~~~~~~g~~~~~-~p~~~~~~~a--~~g~~~~~~----~g~---~~~~~~v 150 (301)
T 3cky_A 82 GGVL-SACKAGTVIVDMSSVSPSSTLKMAKVAAEKGIDYVD-APVSGGTKGA--EAGTLTIMV----GAS---EAVFEKI 150 (301)
T ss_dssp TCHH-HHSCTTCEEEECCCCCHHHHHHHHHHHHHTTCEEEE-CCEESHHHHH--HHTCEEEEE----ESC---HHHHHHH
T ss_pred chHh-hcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEE-ccCCCCHHHH--HcCCeEEEE----CCC---HHHHHHH
Confidence 663 5678999999998876444455555443 3567775 5887755221 124323332 232 4567889
Q ss_pred HHHHHhcCCEEEEeChHHHHHHHHHhhhhH
Q 044593 185 LDVFAKEGCRMVEMSCFDHDKYAAGSQFVT 214 (335)
Q Consensus 185 ~~l~~~~G~~v~~~~~~eHD~~~A~~s~lp 214 (335)
+++|+.+|.++++++...+..++.++.+..
T Consensus 151 ~~ll~~~g~~~~~~~~~g~~~~~Kl~~N~~ 180 (301)
T 3cky_A 151 QPVLSVIGKDIYHVGDTGAGDAVKIVNNLL 180 (301)
T ss_dssp HHHHHHHEEEEEEEESTTHHHHHHHHHHHH
T ss_pred HHHHHHhcCCEEEeCCCCHHHHHHHHHHHH
Confidence 999999999988888888888877765543
No 44
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=99.68 E-value=1.4e-16 Score=152.17 Aligned_cols=219 Identities=15% Similarity=0.142 Sum_probs=139.1
Q ss_pred hcccCC--CCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCC--------------CceecChhhHhhc
Q 044593 24 TQYVKS--TSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLN--------------APFFADLNDLCEL 87 (335)
Q Consensus 24 ~~~~~~--~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g--------------~~~~~~~~~~~~~ 87 (335)
.|.++| ..|||+|||+|.||+++|..|.++|++|++|+|+++..+...+.+ +..++++.+++ .
T Consensus 20 ~~~~~m~~~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~-~ 98 (356)
T 3k96_A 20 FQSNAMEPFKHPIAILGAGSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASL-E 98 (356)
T ss_dssp -------CCCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHH-T
T ss_pred hhhhcccccCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHH-h
Confidence 444443 368999999999999999999999999999999987665454433 23456777777 7
Q ss_pred CCCEEEEecCchhHHHHHhhccccccCCccEEEEcCC-CC---chHHHHHHhhCCCCCceEeccccCCCCCcccccCCCc
Q 044593 88 HPDVVLLSTSILSTQSVLKSIPFQRLKRSTLFVDVLS-VK---EFPRNLFLKYLPQDFDILCTHPMFGPESAKSSWENLP 163 (335)
Q Consensus 88 ~aDvVIlavp~~~~~~vl~~l~~~~l~~~~iVvd~~S-vK---~~~~~~l~~~l~~~~~~v~~HPmaG~~~~~~~~~g~~ 163 (335)
++|+||+|||...+.++++++. +.++++++|++++. +. ..+.+.+.+.++.. .+. -+.||....+...+.|
T Consensus 99 ~aDvVilaVp~~~~~~vl~~i~-~~l~~~~ivvs~~kGi~~~t~~~se~i~~~l~~~-~~~---vlsgP~~a~ev~~g~p 173 (356)
T 3k96_A 99 GVTDILIVVPSFAFHEVITRMK-PLIDAKTRIAWGTKGLAKGSRLLHEVVATELGQV-PMA---VISGPSLATEVAANLP 173 (356)
T ss_dssp TCCEEEECCCHHHHHHHHHHHG-GGCCTTCEEEECCCSCBTTTBCHHHHHHHHHCSC-CEE---EEESSCCHHHHHTTCC
T ss_pred cCCEEEECCCHHHHHHHHHHHH-HhcCCCCEEEEEeCCCCcCccCHHHHHHHHcCCC-CEE---EEECccHHHHHHcCCC
Confidence 9999999999999999999995 68899999998753 21 12234566656532 211 2456665544445666
Q ss_pred ceecccccCCChhHHHHHHHHHHHHHhcCCEEEEeChHHHHHHHHHhhhhHHHHHHHHHHcCCCC---CCCCCcchhhHH
Q 044593 164 FMYDKVRIGNDEERIKRVDKFLDVFAKEGCRMVEMSCFDHDKYAAGSQFVTHTMGRVLERFGVES---SPINTKGYETLL 240 (335)
Q Consensus 164 ~i~~~~~~~~~~~~~~~~~~v~~l~~~~G~~v~~~~~~eHD~~~A~~s~lph~la~aL~~~~~~~---~~~~~~gf~~~~ 240 (335)
..++ +++. +.+..+.++++|+..|++++..+.-..-.+.+++-++-.+.+-.....+... ..+.+.++..+.
T Consensus 174 t~~v---ia~~--~~~~~~~v~~lf~~~~~rv~~~~Di~g~e~~galkNviaia~G~~~gl~~g~N~~aal~~~~l~E~~ 248 (356)
T 3k96_A 174 TAVS---LASN--NSQFSKDLIERLHGQRFRVYKNDDMIGVELCGSVKNILAIATGISDGLKLGSNARAALITRGLTEMG 248 (356)
T ss_dssp EEEE---EEES--CHHHHHHHHHHHCCSSEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred eEEE---EecC--CHHHHHHHHHHhCCCCeeEEEeCCHHHHHHHHHHHHHHHHHHHHHhhccCCchHHHHHHHHHHHHHH
Confidence 5443 2222 3467789999999999998887755544444443333222111111111111 012345677777
Q ss_pred HHHHHhhCCChHhH
Q 044593 241 DLVDNTKGDSFDLY 254 (335)
Q Consensus 241 rl~~~ia~~~~~lw 254 (335)
+++.. .+.+|+.+
T Consensus 249 ~l~~a-~G~~~~t~ 261 (356)
T 3k96_A 249 RLVSV-FGGKQETL 261 (356)
T ss_dssp HHHHH-TTCCHHHH
T ss_pred HHHHH-hCCChHhh
Confidence 77765 45566544
No 45
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=99.67 E-value=1.2e-15 Score=149.59 Aligned_cols=159 Identities=13% Similarity=0.079 Sum_probs=118.4
Q ss_pred cCCCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcH--------HHHHhCCC-------------ceecChhhHh
Q 044593 27 VKSTSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSP--------AVRQQLNA-------------PFFADLNDLC 85 (335)
Q Consensus 27 ~~~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~--------~~a~~~g~-------------~~~~~~~~~~ 85 (335)
..+..+||+|||+|.||++||..|+++|++|++||++++.. +.+.+.|. ..+++++ .+
T Consensus 50 ~~~~i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl~-al 128 (460)
T 3k6j_A 50 EAYDVNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDFH-KL 128 (460)
T ss_dssp CCCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCGG-GC
T ss_pred CcccCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCHH-HH
Confidence 44567899999999999999999999999999999998621 12333443 2456665 45
Q ss_pred hcCCCEEEEecCchh--HHHHHhhccccccCCccEEEEcCCCCchHHHHHHhhCCCCCceEeccccCCCCCcccccCCCc
Q 044593 86 ELHPDVVLLSTSILS--TQSVLKSIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQDFDILCTHPMFGPESAKSSWENLP 163 (335)
Q Consensus 86 ~~~aDvVIlavp~~~--~~~vl~~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~~~~~v~~HPmaG~~~~~~~~~g~~ 163 (335)
++||+||.|+|.+. ...++.++. +.++++++|++++|+- .+..+.+.++...+|++.||+.++...+ .
T Consensus 129 -~~aDlVIeAVpe~~~vk~~v~~~l~-~~~~~~aIlasnTSsl--~i~~ia~~~~~p~r~iG~HffnPv~~m~------L 198 (460)
T 3k6j_A 129 -SNCDLIVESVIEDMKLKKELFANLE-NICKSTCIFGTNTSSL--DLNEISSVLRDPSNLVGIHFFNPANVIR------L 198 (460)
T ss_dssp -TTCSEEEECCCSCHHHHHHHHHHHH-TTSCTTCEEEECCSSS--CHHHHHTTSSSGGGEEEEECCSSTTTCC------E
T ss_pred -ccCCEEEEcCCCCHHHHHHHHHHHH-hhCCCCCEEEecCCCh--hHHHHHHhccCCcceEEEEecchhhhCC------E
Confidence 79999999999763 467888885 6789999998877663 3466766665555799999999554321 1
Q ss_pred ceecccccCCChhHHHHHHHHHHHHHhcCCEEEEeCh
Q 044593 164 FMYDKVRIGNDEERIKRVDKFLDVFAKEGCRMVEMSC 200 (335)
Q Consensus 164 ~i~~~~~~~~~~~~~~~~~~v~~l~~~~G~~v~~~~~ 200 (335)
+-+ ++++.++++.++.+.++++.+|..++++..
T Consensus 199 vEI----v~g~~Ts~e~~~~~~~l~~~lGk~~v~v~d 231 (460)
T 3k6j_A 199 VEI----IYGSHTSSQAIATAFQACESIKKLPVLVGN 231 (460)
T ss_dssp EEE----ECCSSCCHHHHHHHHHHHHHTTCEEEEESS
T ss_pred EEE----EeCCCCCHHHHHHHHHHHHHhCCEEEEEec
Confidence 111 234445678899999999999999999863
No 46
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=99.67 E-value=8.6e-16 Score=136.90 Aligned_cols=168 Identities=15% Similarity=0.198 Sum_probs=121.1
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCeEEE-EcCCCCcHHH-HHhCCCceecChhhHhhcCCCEEEEecCchhHHHHH
Q 044593 28 KSTSLKIAVIGFGNFGQFLAKAFARHHHTLLV-HSRSDHSPAV-RQQLNAPFFADLNDLCELHPDVVLLSTSILSTQSVL 105 (335)
Q Consensus 28 ~~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~-~dr~~~~~~~-a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~~~~vl 105 (335)
.|++|||+|||+|.||.++|..|.+.|++|++ +||+++..+. +.+.|+....+..+.+ .++|+||+|+|+..+.+++
T Consensus 20 ~m~mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g~~~~~~~~~~~-~~aDvVilavp~~~~~~v~ 98 (220)
T 4huj_A 20 FQSMTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRFGASVKAVELKDA-LQADVVILAVPYDSIADIV 98 (220)
T ss_dssp GGGSCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHHTTTEEECCHHHH-TTSSEEEEESCGGGHHHHH
T ss_pred hhcCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHhCCCcccChHHHH-hcCCEEEEeCChHHHHHHH
Confidence 35678999999999999999999999999998 9999876643 4556776655555556 7899999999999999999
Q ss_pred hhccccccCCccEEEEcCCCCc------------hHHHHHHhhCCCCCceEeccccCCCCCcc--cccCCCcceeccccc
Q 044593 106 KSIPFQRLKRSTLFVDVLSVKE------------FPRNLFLKYLPQDFDILCTHPMFGPESAK--SSWENLPFMYDKVRI 171 (335)
Q Consensus 106 ~~l~~~~l~~~~iVvd~~SvK~------------~~~~~l~~~l~~~~~~v~~HPmaG~~~~~--~~~~g~~~i~~~~~~ 171 (335)
.++. + + ++++|+|+++.-. ...+.+++.++ +.+++.++|........ ..+.+.+..+. +.
T Consensus 99 ~~l~-~-~-~~~ivi~~~~g~~~~~~~~~~~~~~~~~~~l~~~l~-~~~vv~~~~~~~~~v~~~g~~~~~~~~~v~--~~ 172 (220)
T 4huj_A 99 TQVS-D-W-GGQIVVDASNAIDFPAFKPRDLGGRLSTEIVSELVP-GAKVVKAFNTLPAAVLAADPDKGTGSRVLF--LS 172 (220)
T ss_dssp TTCS-C-C-TTCEEEECCCCBCTTTCCBCCCTTCCHHHHHHHHST-TCEEEEESCSSCHHHHTSCSBCSSCEEEEE--EE
T ss_pred HHhh-c-c-CCCEEEEcCCCCCcccccccccCCCcHHHHHHHHCC-CCCEEECCCCCCHHHhhhCcccCCCCeeEE--Ee
Confidence 9995 4 4 5889999875431 15678888887 45677777654433211 01122222111 01
Q ss_pred CCChhHHHHHHHHHHHHHhcCCEEEEeChHHHHH
Q 044593 172 GNDEERIKRVDKFLDVFAKEGCRMVEMSCFDHDK 205 (335)
Q Consensus 172 ~~~~~~~~~~~~v~~l~~~~G~~v~~~~~~eHD~ 205 (335)
+. +++..+.++++++.+|.+++.+.+-...+
T Consensus 173 g~---~~~~~~~v~~l~~~~G~~~~~~G~l~~a~ 203 (220)
T 4huj_A 173 GN---HSDANRQVAELISSLGFAPVDLGTLAASG 203 (220)
T ss_dssp ES---CHHHHHHHHHHHHHTTCEEEECCSHHHHH
T ss_pred CC---CHHHHHHHHHHHHHhCCCeEeeCChhhcc
Confidence 22 25677899999999999999998765543
No 47
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=99.67 E-value=9.6e-16 Score=142.84 Aligned_cols=156 Identities=15% Similarity=0.083 Sum_probs=114.1
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHH-----------hCC------------------CceecC
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQ-----------QLN------------------APFFAD 80 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~-----------~~g------------------~~~~~~ 80 (335)
.++||+|||+|.||..+|..|.++|++|++||++++..+.+. +.| +..+++
T Consensus 14 ~~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~ 93 (302)
T 1f0y_A 14 IVKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATSTD 93 (302)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEESC
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEEecC
Confidence 457899999999999999999999999999999987654321 233 234567
Q ss_pred hhhHhhcCCCEEEEecCchh--HHHHHhhccccccCCccEEEEcCCCCchHHHHHHhhCCCCCceEeccccCCCCCcccc
Q 044593 81 LNDLCELHPDVVLLSTSILS--TQSVLKSIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQDFDILCTHPMFGPESAKSS 158 (335)
Q Consensus 81 ~~~~~~~~aDvVIlavp~~~--~~~vl~~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~~~~~v~~HPmaG~~~~~~~ 158 (335)
+.+.+ .+||+||+|+|.+. ...++.++. +.++++++|++++|+- ....+.+.++...++++.||+......
T Consensus 94 ~~~~~-~~aD~Vi~avp~~~~~~~~v~~~l~-~~~~~~~iv~s~ts~i--~~~~l~~~~~~~~~~~g~h~~~P~~~~--- 166 (302)
T 1f0y_A 94 AASVV-HSTDLVVEAIVENLKVKNELFKRLD-KFAAEHTIFASNTSSL--QITSIANATTRQDRFAGLHFFNPVPVM--- 166 (302)
T ss_dssp HHHHT-TSCSEEEECCCSCHHHHHHHHHHHT-TTSCTTCEEEECCSSS--CHHHHHTTSSCGGGEEEEEECSSTTTC---
T ss_pred HHHhh-cCCCEEEEcCcCcHHHHHHHHHHHH-hhCCCCeEEEECCCCC--CHHHHHHhcCCcccEEEEecCCCcccC---
Confidence 77666 79999999999875 467788885 5688899998766553 335666656544579999998744321
Q ss_pred cCCCcceecccccCCChhHHHHHHHHHHHHHhcCCEEEEeC
Q 044593 159 WENLPFMYDKVRIGNDEERIKRVDKFLDVFAKEGCRMVEMS 199 (335)
Q Consensus 159 ~~g~~~i~~~~~~~~~~~~~~~~~~v~~l~~~~G~~v~~~~ 199 (335)
..+.+ ++++..+++.++.+.++++.+|..++++.
T Consensus 167 ---~~~~i----~~g~~~~~e~~~~~~~l~~~~G~~~v~~~ 200 (302)
T 1f0y_A 167 ---KLVEV----IKTPMTSQKTFESLVDFSKALGKHPVSCK 200 (302)
T ss_dssp ---CEEEE----ECCTTCCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred ---ceEEE----eCCCCCCHHHHHHHHHHHHHcCCceEEec
Confidence 11122 23434456788999999999998888875
No 48
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=99.67 E-value=2.5e-16 Score=145.05 Aligned_cols=153 Identities=16% Similarity=0.165 Sum_probs=101.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHHcCCeE-EEEcCCCCcHHHH-HhCCCceecChhhHhhcCCCEEEEecCchhHHHHHhhc
Q 044593 31 SLKIAVIGFGNFGQFLAKAFARHHHTL-LVHSRSDHSPAVR-QQLNAPFFADLNDLCELHPDVVLLSTSILSTQSVLKSI 108 (335)
Q Consensus 31 ~~kI~IIG~G~mG~siA~~L~~~G~~V-~~~dr~~~~~~~a-~~~g~~~~~~~~~~~~~~aDvVIlavp~~~~~~vl~~l 108 (335)
+|||+|||+|.||++++..|.+. ++| .+|||+++..+.+ ...|. .+.++.+++ .++|+||+|||+....+++.++
T Consensus 2 ~m~I~iIG~G~mG~~la~~l~~~-~~v~~v~~~~~~~~~~~~~~~g~-~~~~~~~~~-~~~DvVilav~~~~~~~v~~~l 78 (276)
T 2i76_A 2 SLVLNFVGTGTLTRFFLECLKDR-YEIGYILSRSIDRARNLAEVYGG-KAATLEKHP-ELNGVVFVIVPDRYIKTVANHL 78 (276)
T ss_dssp --CCEEESCCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTCC-CCCSSCCCC-C---CEEECSCTTTHHHHHTTT
T ss_pred CceEEEEeCCHHHHHHHHHHHHc-CcEEEEEeCCHHHHHHHHHHcCC-ccCCHHHHH-hcCCEEEEeCChHHHHHHHHHh
Confidence 47999999999999999999988 999 5999998765444 45676 556666666 7899999999999999999887
Q ss_pred cccccCCccEEEEcCCCCchHHHHHHhhCCCCCceEeccccCCC---CCcccccCCCcceecccccCCChhHHHHHHHHH
Q 044593 109 PFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQDFDILCTHPMFGP---ESAKSSWENLPFMYDKVRIGNDEERIKRVDKFL 185 (335)
Q Consensus 109 ~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~~~~~v~~HPmaG~---~~~~~~~~g~~~i~~~~~~~~~~~~~~~~~~v~ 185 (335)
. +++++|+|+++.... +.+++ ..+.+.||++.. ......+.+.++.++ .+. +..+.++
T Consensus 79 ~----~~~~ivi~~s~~~~~--~~l~~-----~~~~~~~p~~~~~g~~~~~~~~~~~~~~~~-----~~~---~~~~~~~ 139 (276)
T 2i76_A 79 N----LGDAVLVHCSGFLSS--EIFKK-----SGRASIHPNFSFSSLEKALEMKDQIVFGLE-----GDE---RGLPIVK 139 (276)
T ss_dssp C----CSSCCEEECCSSSCG--GGGCS-----SSEEEEEECSCC--CTTGGGCGGGCCEEEC-----CCT---TTHHHHH
T ss_pred c----cCCCEEEECCCCCcH--HHHHH-----hhccccchhhhcCCCchhHHHhCCCeEEEE-----eCh---HHHHHHH
Confidence 3 578899998744221 22221 145667886632 211111344444442 222 2367888
Q ss_pred HHHHhcCCEEEEeChHHHHH
Q 044593 186 DVFAKEGCRMVEMSCFDHDK 205 (335)
Q Consensus 186 ~l~~~~G~~v~~~~~~eHD~ 205 (335)
++++.+|.+++++++++|+.
T Consensus 140 ~l~~~lG~~~~~v~~~~~~~ 159 (276)
T 2i76_A 140 KIAEEISGKYFVIPSEKKKA 159 (276)
T ss_dssp HHHHHHCSCEEECCGGGHHH
T ss_pred HHHHHhCCCEEEECHHHHHH
Confidence 99999999999999888774
No 49
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=99.66 E-value=8.5e-16 Score=152.09 Aligned_cols=173 Identities=15% Similarity=0.137 Sum_probs=128.2
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhC----CCceecChhhHhhcC---CCEEEEecCch-h
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQL----NAPFFADLNDLCELH---PDVVLLSTSIL-S 100 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~----g~~~~~~~~~~~~~~---aDvVIlavp~~-~ 100 (335)
|+.+||+|||+|.||+.+|..|.++|++|++|||+++..+...+. |+..+.++.+++ .. +|+||+|||.. .
T Consensus 3 m~~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~gi~~~~s~~e~v-~~l~~aDvVilavp~~~~ 81 (474)
T 2iz1_A 3 MAQANFGVVGMAVMGKNLALNVESRGYTVAIYNRTTSKTEEVFKEHQDKNLVFTKTLEEFV-GSLEKPRRIMLMVQAGAA 81 (474)
T ss_dssp CTTBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSCEEECSSHHHHH-HTBCSSCEEEECCCTTHH
T ss_pred CCCCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHhCcCCCeEEeCCHHHHH-hhccCCCEEEEEccCchH
Confidence 335799999999999999999999999999999998766544432 676677888876 55 99999999995 6
Q ss_pred HHHHHhhccccccCCccEEEEcCCCCchHHHHHHhhCC-CCCceEeccccCCCCCcccccCCCcceecccccCCChhHHH
Q 044593 101 TQSVLKSIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLP-QDFDILCTHPMFGPESAKSSWENLPFMYDKVRIGNDEERIK 179 (335)
Q Consensus 101 ~~~vl~~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~-~~~~~v~~HPmaG~~~~~~~~~g~~~i~~~~~~~~~~~~~~ 179 (335)
+.++++++. +.++++++|+|++++.......+.+.++ .+..|++ .|++|++... ..|. .++. ++ +.+
T Consensus 82 v~~vl~~l~-~~l~~g~iiId~s~~~~~~~~~l~~~l~~~g~~~v~-~pv~gg~~~a--~~g~-~i~~----gg---~~~ 149 (474)
T 2iz1_A 82 TDATIKSLL-PLLDIGDILIDGGNTHFPDTMRRNAELADSGINFIG-TGVSGGEKGA--LLGP-SMMP----GG---QKE 149 (474)
T ss_dssp HHHHHHHHG-GGCCTTCEEEECSCCCHHHHHHHHHHTTTSSCEEEE-EEECSHHHHH--HHCC-CEEE----EE---CHH
T ss_pred HHHHHHHHH-hhCCCCCEEEECCCCCHHHHHHHHHHHHHCCCeEEC-CCCCCChhhh--ccCC-eEEe----cC---CHH
Confidence 888998885 6788999999998876554455656665 3567875 5888765421 1343 2332 22 246
Q ss_pred HHHHHHHHHHhcCCE--------EEEeChHHHHHHHHHhhhhH
Q 044593 180 RVDKFLDVFAKEGCR--------MVEMSCFDHDKYAAGSQFVT 214 (335)
Q Consensus 180 ~~~~v~~l~~~~G~~--------v~~~~~~eHD~~~A~~s~lp 214 (335)
.++.++++|+.+|.+ +.++++......+.++.+..
T Consensus 150 ~~~~v~~ll~~~g~~~~~dge~~~~~~g~~g~g~~~Kl~~N~~ 192 (474)
T 2iz1_A 150 AYDLVAPIFEQIAAKAPQDGKPCVAYMGANGAGHYVKMVHNGI 192 (474)
T ss_dssp HHHHHHHHHHHHSCBCTTTCCBSBCCCBSTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccccCCCceEEEECCccHHHHHHHHHhHH
Confidence 788899999999988 56777666666666655443
No 50
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=99.65 E-value=8.5e-16 Score=142.29 Aligned_cols=170 Identities=14% Similarity=0.166 Sum_probs=120.5
Q ss_pred CeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCch-hHHHHHhhcc-
Q 044593 32 LKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSIL-STQSVLKSIP- 109 (335)
Q Consensus 32 ~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~-~~~~vl~~l~- 109 (335)
|||+|||+|.||..++..|.+.|++|++|||+++..+.+.+.|+....++.+++ .++|+||+|+|.. .+..++.++.
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~Dvvi~~vp~~~~~~~v~~~~~~ 79 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVA-EKADRIITMLPTSINAIEAYSGANG 79 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTTCCEEEECSSTHHHHHHHTTTCEECSSHHHHH-HHCSEEEECCSSHHHHHHHHHSTTS
T ss_pred CeEEEEeccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeecCCHHHHH-hcCCEEEEeCCCHHHHHHHHhCchh
Confidence 689999999999999999999999999999999877767777887777888877 7899999999754 6778887642
Q ss_pred -ccccCCccEEEEcCCCCchHHHHHHhhCC-CCCceEeccccCCCCCcccccCCCcceecccccCCChhHHHHHHHHHHH
Q 044593 110 -FQRLKRSTLFVDVLSVKEFPRNLFLKYLP-QDFDILCTHPMFGPESAKSSWENLPFMYDKVRIGNDEERIKRVDKFLDV 187 (335)
Q Consensus 110 -~~~l~~~~iVvd~~SvK~~~~~~l~~~l~-~~~~~v~~HPmaG~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~~~v~~l 187 (335)
.+.++++++|+|+++++....+.+.+.++ .+..|+ .+|+.+...... .+...++. +.+ .+.++.++++
T Consensus 80 ~~~~l~~~~~vv~~s~~~~~~~~~~~~~~~~~g~~~~-~~p~~~g~~~a~--~~~~~~~~----~~~---~~~~~~v~~l 149 (296)
T 2gf2_A 80 ILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMGAVFM-DAPVSGGVGAAR--SGNLTFMV----GGV---EDEFAAAQEL 149 (296)
T ss_dssp GGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEE-ECCEESHHHHHH--HTCEEEEE----ESC---GGGHHHHHHH
T ss_pred HHhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEE-EcCCCCChhHHh--cCcEEEEe----CCC---HHHHHHHHHH
Confidence 13568899999988776655554443332 234454 468876542110 23322332 233 3456788999
Q ss_pred HHhcCCEEEEeChHHHHHHHHHhhh
Q 044593 188 FAKEGCRMVEMSCFDHDKYAAGSQF 212 (335)
Q Consensus 188 ~~~~G~~v~~~~~~eHD~~~A~~s~ 212 (335)
|+.+|.+++.+........+.+.++
T Consensus 150 ~~~~g~~~~~~~~~g~~~~~kl~~n 174 (296)
T 2gf2_A 150 LGCMGSNVVYCGAVGTGQAAKICNN 174 (296)
T ss_dssp HTTTEEEEEEEESTTHHHHHHHHHH
T ss_pred HHHHcCCeEEeCCccHHHHHHHHHH
Confidence 9999998888766554445544443
No 51
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=99.65 E-value=9.1e-16 Score=138.97 Aligned_cols=185 Identities=15% Similarity=0.176 Sum_probs=125.4
Q ss_pred cCCCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCc--------------HH-HHHhCCCceecChhhHhhcCCCE
Q 044593 27 VKSTSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHS--------------PA-VRQQLNAPFFADLNDLCELHPDV 91 (335)
Q Consensus 27 ~~~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~--------------~~-~a~~~g~~~~~~~~~~~~~~aDv 91 (335)
.....+||+|||+|.||+++|..|.++|++|++|||+++. .+ .+.+.+.....++.+++ +++|+
T Consensus 15 ~~~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~aDv 93 (245)
T 3dtt_A 15 LYFQGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVHLAAFADVA-AGAEL 93 (245)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCEEEEHHHHH-HHCSE
T ss_pred cccCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCceeccCHHHHH-hcCCE
Confidence 3456899999999999999999999999999999999865 22 22334555566777777 78999
Q ss_pred EEEecCchhHHHHHhhc-cccccCCccEEEEcCCC---------------CchHHHHHHhhCCCCCceEeccccCCCCC-
Q 044593 92 VLLSTSILSTQSVLKSI-PFQRLKRSTLFVDVLSV---------------KEFPRNLFLKYLPQDFDILCTHPMFGPES- 154 (335)
Q Consensus 92 VIlavp~~~~~~vl~~l-~~~~l~~~~iVvd~~Sv---------------K~~~~~~l~~~l~~~~~~v~~HPmaG~~~- 154 (335)
||+|+|+....+++.++ . +.+ ++++|+|+++. .....+.+++.++. .+++.+.|......
T Consensus 94 Vilavp~~~~~~~~~~i~~-~~l-~g~ivi~~s~~~~~~~G~~~t~~~~~~~~~~~~l~~~l~~-~~vv~~~~~~~a~v~ 170 (245)
T 3dtt_A 94 VVNATEGASSIAALTAAGA-ENL-AGKILVDIANPLDFSHGMPPTLNPVNTDSLGEQIQRTFPE-AKVVKTLNTMNASLM 170 (245)
T ss_dssp EEECSCGGGHHHHHHHHCH-HHH-TTSEEEECCCCEECTTCSSCEESSCSSCCHHHHHHHHSTT-SEEEECSTTSCHHHH
T ss_pred EEEccCcHHHHHHHHHhhh-hhc-CCCEEEECCCCCCCcCCccccccCCCCccHHHHHHHHCCC-CeEEEeecccCHHHh
Confidence 99999999988888887 4 445 88999999831 12455778888864 45555443332111
Q ss_pred c-cccc-CCCcceecccccCCChhHHHHHHHHHHHHHhcCCE-EEEeChHHHHHHHHHhhhhHHHHHHHH
Q 044593 155 A-KSSW-ENLPFMYDKVRIGNDEERIKRVDKFLDVFAKEGCR-MVEMSCFDHDKYAAGSQFVTHTMGRVL 221 (335)
Q Consensus 155 ~-~~~~-~g~~~i~~~~~~~~~~~~~~~~~~v~~l~~~~G~~-v~~~~~~eHD~~~A~~s~lph~la~aL 221 (335)
+ .... .+...++ ++++ +.+..+.++++|+.+|++ ++.+.+-.....+..+..+-..++.++
T Consensus 171 ~~~~~a~~g~~~~~----v~g~--d~~~~~~v~~ll~~~g~~~~~~~G~~g~a~~~k~~~~~~~~l~~~~ 234 (245)
T 3dtt_A 171 VDPGRAAGGDHSVF----VSGN--DAAAKAEVATLLKSLGHQDVIDLGDITTARGAEMLLPVWIRLWGAL 234 (245)
T ss_dssp HCGGGTGGGCCCEE----EECS--CHHHHHHHHHHHHHTTCCCEEEEESGGGHHHHHTTHHHHHHHHHHH
T ss_pred cCccccCCCCeeEE----EECC--CHHHHHHHHHHHHHcCCCceeccCcHHHHHHhhhhHHHHHHHHHHc
Confidence 1 1111 2222222 1222 246788999999999986 678877776777777665555555443
No 52
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=99.64 E-value=5.4e-16 Score=153.80 Aligned_cols=170 Identities=11% Similarity=0.061 Sum_probs=125.1
Q ss_pred CeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHh-----CCCceecChhhHhh--cCCCEEEEecCch-hHHH
Q 044593 32 LKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQ-----LNAPFFADLNDLCE--LHPDVVLLSTSIL-STQS 103 (335)
Q Consensus 32 ~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~-----~g~~~~~~~~~~~~--~~aDvVIlavp~~-~~~~ 103 (335)
|||+|||+|.||+.+|..|.++|++|++|||+++..+...+ .|+..+.++++++. +++|+||+|||.. .+.+
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~g~gi~~~~~~~e~v~~l~~aDvVilaVp~~~~v~~ 82 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVDN 82 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHHH
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhccccCCCeEEeCCHHHHHhhccCCCEEEEeCCChHHHHH
Confidence 68999999999999999999999999999999987765655 56767778887751 3899999999996 6889
Q ss_pred HHhhccccccCCccEEEEcCCCCchHHHHHHhhCC-CCCceEeccccCCCCCcccccCCCcceecccccCCChhHHHHHH
Q 044593 104 VLKSIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLP-QDFDILCTHPMFGPESAKSSWENLPFMYDKVRIGNDEERIKRVD 182 (335)
Q Consensus 104 vl~~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~-~~~~~v~~HPmaG~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~~ 182 (335)
++.++. +.++++++|+|++++.......+.+.++ .+..|++ .|++|++... ..|. .++. +++ .+.++
T Consensus 83 vl~~l~-~~l~~g~iII~~s~~~~~~~~~l~~~l~~~g~~~v~-~pv~g~~~~a--~~g~-~i~~----gg~---~e~~~ 150 (482)
T 2pgd_A 83 FIEKLV-PLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGILFVG-SGVSGGEDGA--RYGP-SLMP----GGN---KEAWP 150 (482)
T ss_dssp HHHHHH-HHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE-EEEESHHHHH--HHCC-EEEE----EEC---TTTHH
T ss_pred HHHHHH-hhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEeC-CCCCCChhhh--ccCC-eEEe----CCC---HHHHH
Confidence 998885 6788999999998776544344444443 3567875 5888776431 1343 2332 222 34678
Q ss_pred HHHHHHHhcCCEE-------EEeChHHHHHHHHHhhhh
Q 044593 183 KFLDVFAKEGCRM-------VEMSCFDHDKYAAGSQFV 213 (335)
Q Consensus 183 ~v~~l~~~~G~~v-------~~~~~~eHD~~~A~~s~l 213 (335)
.++++|+.+|.++ .++++......+.++.+.
T Consensus 151 ~v~~ll~~~g~~v~d~~~~~~~~g~~g~g~~~Kl~~N~ 188 (482)
T 2pgd_A 151 HIKAIFQGIAAKVGTGEPCCDWVGDDGAGHFVKMVHNG 188 (482)
T ss_dssp HHHHHHHHHSCBCTTSCBSCCCCEETTHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhccCCCcceEEECCCcHHHHHHHHHHH
Confidence 8899999999886 566666666666665543
No 53
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=99.63 E-value=1.3e-15 Score=150.92 Aligned_cols=155 Identities=15% Similarity=0.113 Sum_probs=115.7
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHh-----------CCC-------------ceecChhhHh
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQ-----------LNA-------------PFFADLNDLC 85 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~-----------~g~-------------~~~~~~~~~~ 85 (335)
..+||+|||+|.||++||..|+++|++|++||++++..+.+.+ .|. ..+++++. +
T Consensus 4 ~~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~ 82 (483)
T 3mog_A 4 NVQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDIHA-L 82 (483)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCGGG-G
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCHHH-h
Confidence 4679999999999999999999999999999999887654432 332 23556654 4
Q ss_pred hcCCCEEEEecCchh--HHHHHhhccccccCCccEEEEcCCCCchHHHHHHhhCCCCCceEeccccCCCCCcccccCCCc
Q 044593 86 ELHPDVVLLSTSILS--TQSVLKSIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQDFDILCTHPMFGPESAKSSWENLP 163 (335)
Q Consensus 86 ~~~aDvVIlavp~~~--~~~vl~~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~~~~~v~~HPmaG~~~~~~~~~g~~ 163 (335)
++||+||+|+|.+. ..+++.++. +.++++++|++.+|+. ....+.+.++...++++.||+.+....+ .
T Consensus 83 -~~aDlVIeAVpe~~~vk~~v~~~l~-~~~~~~~IlasntSti--~i~~ia~~~~~p~~~ig~hf~~Pa~v~~------L 152 (483)
T 3mog_A 83 -AAADLVIEAASERLEVKKALFAQLA-EVCPPQTLLTTNTSSI--SITAIAAEIKNPERVAGLHFFNPAPVMK------L 152 (483)
T ss_dssp -GGCSEEEECCCCCHHHHHHHHHHHH-HHSCTTCEEEECCSSS--CHHHHTTTSSSGGGEEEEEECSSTTTCC------E
T ss_pred -cCCCEEEEcCCCcHHHHHHHHHHHH-HhhccCcEEEecCCCC--CHHHHHHHccCccceEEeeecChhhhCC------e
Confidence 78999999999984 467888885 6788999986544442 2255666665555799999999776431 1
Q ss_pred ceecccccCCChhHHHHHHHHHHHHHhcCCEEEEeC
Q 044593 164 FMYDKVRIGNDEERIKRVDKFLDVFAKEGCRMVEMS 199 (335)
Q Consensus 164 ~i~~~~~~~~~~~~~~~~~~v~~l~~~~G~~v~~~~ 199 (335)
+.+ ++++.++++.++.+.++++.+|..++++.
T Consensus 153 vev----v~g~~Ts~e~~~~~~~l~~~lGk~~v~v~ 184 (483)
T 3mog_A 153 VEV----VSGLATAAEVVEQLCELTLSWGKQPVRCH 184 (483)
T ss_dssp EEE----EECSSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEE----ecCCCCCHHHHHHHHHHHHHhCCEEEEEe
Confidence 122 23444567788999999999999988885
No 54
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=99.62 E-value=6.3e-15 Score=134.27 Aligned_cols=161 Identities=11% Similarity=0.151 Sum_probs=115.3
Q ss_pred CeEEEEcccHHHHHHHHHHHHcCCeEEEEcC--CCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCchhHHHHHhhcc
Q 044593 32 LKIAVIGFGNFGQFLAKAFARHHHTLLVHSR--SDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILSTQSVLKSIP 109 (335)
Q Consensus 32 ~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr--~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~~~~vl~~l~ 109 (335)
|||+|||+|.||..+|..|.+.|++|++||+ +++..+.+.+.|+. .++.+++ .++|+||+|+|+....+.+.++.
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~g~~V~~~~~~~~~~~~~~~~~~g~~--~~~~~~~-~~aDvvi~~v~~~~~~~~~~~~~ 77 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGVT--ETSEEDV-YSCPVVISAVTPGVALGAARRAG 77 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTCE--ECCHHHH-HTSSEEEECSCGGGHHHHHHHHH
T ss_pred CeEEEEechHHHHHHHHHHHHCCCeEEEeCCccCHHHHHHHHHCCCc--CCHHHHH-hcCCEEEEECCCHHHHHHHHHHH
Confidence 6899999999999999999999999999998 44445545555766 5667776 79999999999987655566663
Q ss_pred ccccCCccEEEEcCCCCchHHHHHHhhCCCCCceEeccccCCCCCcccccCCCcceecccccCCChhHHHHHHHHHHHHH
Q 044593 110 FQRLKRSTLFVDVLSVKEFPRNLFLKYLPQDFDILCTHPMFGPESAKSSWENLPFMYDKVRIGNDEERIKRVDKFLDVFA 189 (335)
Q Consensus 110 ~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~~~~~v~~HPmaG~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~~~v~~l~~ 189 (335)
+.+++ +|+|+++++....+.+.+.++... |+. +|+.++.... ..|.+ ++. +++.. +.+++ |+
T Consensus 78 -~~~~~--~vi~~s~~~~~~~~~l~~~~~~~g-~~~-~~v~~~~~~~--~~g~~-~~~----~g~~~-----~~~~~-l~ 139 (264)
T 1i36_A 78 -RHVRG--IYVDINNISPETVRMASSLIEKGG-FVD-AAIMGSVRRK--GADIR-IIA----SGRDA-----EEFMK-LN 139 (264)
T ss_dssp -TTCCS--EEEECSCCCHHHHHHHHHHCSSSE-EEE-EEECSCHHHH--GGGCE-EEE----ESTTH-----HHHHG-GG
T ss_pred -HhcCc--EEEEccCCCHHHHHHHHHHHhhCC-eee-eeeeCCcccc--ccCCe-EEe----cCCcH-----HHhhh-HH
Confidence 45655 999998887666677777776533 665 5887754321 13544 432 33321 56778 99
Q ss_pred hcCCEEEEeCh-HHHHHHHHHhhhh
Q 044593 190 KEGCRMVEMSC-FDHDKYAAGSQFV 213 (335)
Q Consensus 190 ~~G~~v~~~~~-~eHD~~~A~~s~l 213 (335)
.+|.+++++++ -....++.++...
T Consensus 140 ~~g~~~~~~~~~~g~~~~~kl~~n~ 164 (264)
T 1i36_A 140 RYGLNIEVRGREPGDASAIKMLRSS 164 (264)
T ss_dssp GGTCEEEECSSSTTHHHHHHHHHHH
T ss_pred HcCCeeEECCCCcCHHHHHHHHHHH
Confidence 99999889886 3556666665544
No 55
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=99.61 E-value=8.8e-15 Score=142.73 Aligned_cols=190 Identities=14% Similarity=0.076 Sum_probs=133.3
Q ss_pred CCC-CeEEEEcccHHHHHHHHHHHHc------CCeEEEEcCC-CCcHHHHHhCCCce----ecChhhHhhcCCCEEEEec
Q 044593 29 STS-LKIAVIGFGNFGQFLAKAFARH------HHTLLVHSRS-DHSPAVRQQLNAPF----FADLNDLCELHPDVVLLST 96 (335)
Q Consensus 29 ~~~-~kI~IIG~G~mG~siA~~L~~~------G~~V~~~dr~-~~~~~~a~~~g~~~----~~~~~~~~~~~aDvVIlav 96 (335)
.++ +||+|||+|+||.++|..|++. |++|++.+++ +...+.+.+.|+.. ..++.+++ +++|+||+++
T Consensus 51 L~GiKkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~r~~sks~e~A~e~G~~v~d~ta~s~aEAa-~~ADVVILaV 129 (525)
T 3fr7_A 51 FKGIKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEARAAGFTEESGTLGDIWETV-SGSDLVLLLI 129 (525)
T ss_dssp TTTCSEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHHHTTCCTTTTCEEEHHHHH-HHCSEEEECS
T ss_pred hcCCCEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEeCCchhhHHHHHHCCCEEecCCCCCHHHHH-hcCCEEEECC
Confidence 355 8999999999999999999999 9998765554 56677788889875 25677887 7899999999
Q ss_pred CchhHHHHHhhccccccCCccEEEEcCCCCchHHHHHHh---hCCCCCceEeccccCCCCC-------c-ccccCCCcce
Q 044593 97 SILSTQSVLKSIPFQRLKRSTLFVDVLSVKEFPRNLFLK---YLPQDFDILCTHPMFGPES-------A-KSSWENLPFM 165 (335)
Q Consensus 97 p~~~~~~vl~~l~~~~l~~~~iVvd~~SvK~~~~~~l~~---~l~~~~~~v~~HPmaG~~~-------~-~~~~~g~~~i 165 (335)
|+....+++.++. +.+++|++|+...+. .+..+++ .++.++.++..||...... + ...+.|.+.+
T Consensus 130 P~~~~~eVl~eI~-p~LK~GaILs~AaGf---~I~~le~~~i~~p~dv~VVrVmPNtPg~~VR~~y~~G~~~~g~Gv~~l 205 (525)
T 3fr7_A 130 SDAAQADNYEKIF-SHMKPNSILGLSHGF---LLGHLQSAGLDFPKNISVIAVCPKGMGPSVRRLYVQGKEINGAGINSS 205 (525)
T ss_dssp CHHHHHHHHHHHH-HHSCTTCEEEESSSH---HHHHHHHTTCCCCTTSEEEEEEESSCHHHHHHHHHHHTTSTTCSCCEE
T ss_pred ChHHHHHHHHHHH-HhcCCCCeEEEeCCC---CHHHHhhhcccCCCCCcEEEEecCCCchhHHHHHhcccccccCCccEE
Confidence 9998888998885 789999998877764 3345553 5567788999999765443 1 1124677755
Q ss_pred ecccccCCChhHHHHHHHHHHHHHhcCCE-EEEeChHHHH---H---HHHHhhhhHHHH---HHHHHHcCCC
Q 044593 166 YDKVRIGNDEERIKRVDKFLDVFAKEGCR-MVEMSCFDHD---K---YAAGSQFVTHTM---GRVLERFGVE 227 (335)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~v~~l~~~~G~~-v~~~~~~eHD---~---~~A~~s~lph~l---a~aL~~~~~~ 227 (335)
++.. .+ .+.+..+.+..+++.+|.. ++..+..++. . ..+++..+|.++ ..+++..|.+
T Consensus 206 iAv~---qd-~tgea~e~alala~aiG~~~vieTtf~eE~e~DLfgeqtvLsG~~pAlieA~~d~lVe~G~~ 273 (525)
T 3fr7_A 206 FAVH---QD-VDGRATDVALGWSVALGSPFTFATTLEQEYKSDIFGERGILLGAVHGIVEALFRRYTEQGMD 273 (525)
T ss_dssp EEEE---EC-SSSCHHHHHHHHHHHTTCSEEEECCHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHHHTTCC
T ss_pred EEcC---CC-CCHHHHHHHHHHHHHCCCCeeeeeeeeeehhHhhhhhHhhhcCcHHHHHHHHHHHHHHcCCC
Confidence 5421 11 1224567888999999975 5555554433 2 234445555543 3445565654
No 56
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=99.60 E-value=3e-15 Score=148.24 Aligned_cols=168 Identities=13% Similarity=0.164 Sum_probs=122.9
Q ss_pred CeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHh-CC-------CceecChhhHhhc---CCCEEEEecCch-
Q 044593 32 LKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQ-LN-------APFFADLNDLCEL---HPDVVLLSTSIL- 99 (335)
Q Consensus 32 ~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~-~g-------~~~~~~~~~~~~~---~aDvVIlavp~~- 99 (335)
|||+|||+|.||+.+|..|.++|++|++|||+++..+...+ .| +..+.++.+++ . ++|+||+|||..
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~g~~~~~~~i~~~~~~~e~v-~~l~~aDvVilaVp~~~ 80 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFA-ASLKKPRKALILVQAGA 80 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHH-HHBCSSCEEEECCCCSH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCCCCCCCeEEECCHHHHH-hcccCCCEEEEecCChH
Confidence 68999999999999999999999999999999876654443 35 55567777776 4 599999999996
Q ss_pred hHHHHHhhccccccCCccEEEEcCCCCchHHHHHHhhCC-CCCceEeccccCCCCCcccccCCCcceecccccCCChhHH
Q 044593 100 STQSVLKSIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLP-QDFDILCTHPMFGPESAKSSWENLPFMYDKVRIGNDEERI 178 (335)
Q Consensus 100 ~~~~vl~~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~-~~~~~v~~HPmaG~~~~~~~~~g~~~i~~~~~~~~~~~~~ 178 (335)
.+.++++++. +.++++++|+|++++.......+.+.++ .+..|++ .|+.|++... ..|. .++. +++ .
T Consensus 81 ~v~~vl~~l~-~~l~~g~iIId~sng~~~~~~~l~~~l~~~g~~~v~-~pv~gg~~~a--~~g~-~i~~----gg~---~ 148 (478)
T 1pgj_A 81 ATDSTIEQLK-KVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRFLG-MGISGGEEGA--RKGP-AFFP----GGT---L 148 (478)
T ss_dssp HHHHHHHHHH-HHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCEEEE-EEEESHHHHH--HHCC-EEEE----EEC---H
T ss_pred HHHHHHHHHH-hhCCCCCEEEECCCCChHHHHHHHHHHHHCCCeEEE-eeccCCHHHH--hcCC-eEec----cCC---H
Confidence 6889998885 6788999999998776544444444443 3567776 4888765421 1333 2332 232 4
Q ss_pred HHHHHHHHHHHhcCCE-------EEEeChHHHHHHHHHhhh
Q 044593 179 KRVDKFLDVFAKEGCR-------MVEMSCFDHDKYAAGSQF 212 (335)
Q Consensus 179 ~~~~~v~~l~~~~G~~-------v~~~~~~eHD~~~A~~s~ 212 (335)
+.++.++++|+.+|.+ ++++++......+.++++
T Consensus 149 ~~~~~v~~ll~~~g~~~~dg~~~v~~~g~~G~g~~~Kl~~N 189 (478)
T 1pgj_A 149 SVWEEIRPIVEAAAAKADDGRPCVTMNGSGGAGSCVKMYHN 189 (478)
T ss_dssp HHHHHHHHHHHHHSCBCTTSCBSCCCCCSTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccccCCCeeEEEeCCchHHHHHhhHHH
Confidence 5678899999999987 677777666666666544
No 57
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=99.59 E-value=6.1e-15 Score=141.52 Aligned_cols=175 Identities=14% Similarity=0.132 Sum_probs=118.9
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcC-------CeEEEEcCCCC-----cHHHHHhC--------------CCceecChh
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHH-------HTLLVHSRSDH-----SPAVRQQL--------------NAPFFADLN 82 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G-------~~V~~~dr~~~-----~~~~a~~~--------------g~~~~~~~~ 82 (335)
..+|||+|||+|.||+++|..|.++| ++|++|||+++ ..+...+. ++..++++.
T Consensus 19 ~~~~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 98 (375)
T 1yj8_A 19 DGPLKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAHSDLA 98 (375)
T ss_dssp HSCBCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEESSTH
T ss_pred cCCCEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEECCHH
Confidence 34679999999999999999999999 99999999987 55433331 233456677
Q ss_pred hHhhcCCCEEEEecCchhHHHHHhhcccc----ccCCccEEEEcCCC-Cc------hHHHHHHhhCCCCCceEeccccCC
Q 044593 83 DLCELHPDVVLLSTSILSTQSVLKSIPFQ----RLKRSTLFVDVLSV-KE------FPRNLFLKYLPQDFDILCTHPMFG 151 (335)
Q Consensus 83 ~~~~~~aDvVIlavp~~~~~~vl~~l~~~----~l~~~~iVvd~~Sv-K~------~~~~~l~~~l~~~~~~v~~HPmaG 151 (335)
+++ .++|+||+|||...+.+++.++. + .++++++|+++++. .. .+.+.+.+.++.. ..+ ..|
T Consensus 99 ea~-~~aDvVilav~~~~~~~vl~~i~-~~~~~~l~~~~ivvs~~~Gi~~~~~~~~~l~~~l~~~~~~~-~~v----~~g 171 (375)
T 1yj8_A 99 SVI-NDADLLIFIVPCQYLESVLASIK-ESESIKIASHAKAISLTKGFIVKKNQMKLCSNYISDFLNIP-CSA----LSG 171 (375)
T ss_dssp HHH-TTCSEEEECCCHHHHHHHHHHHT-C---CCCCTTCEEEECCCSCEEETTEEECHHHHHHHHSSSC-EEE----EEC
T ss_pred HHH-cCCCEEEEcCCHHHHHHHHHHHh-hhhhccCCCCCEEEEeCCccccCCccccCHHHHHHHHcCCC-EEE----EeC
Confidence 766 78999999999999999999985 6 78899999998743 21 2334444444311 111 234
Q ss_pred CCCcccccCCCcceecccccCCChhHHHHHHHHHHHHHhcCCEEEEeChHHHHHHHHHhhhhHH
Q 044593 152 PESAKSSWENLPFMYDKVRIGNDEERIKRVDKFLDVFAKEGCRMVEMSCFDHDKYAAGSQFVTH 215 (335)
Q Consensus 152 ~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~~~v~~l~~~~G~~v~~~~~~eHD~~~A~~s~lph 215 (335)
|....+...+.+..+. ++.. +.+..+.++++|+..|.+++..+......+.++.-+..+
T Consensus 172 p~~a~~v~~g~~~~~~---~~~~--~~~~~~~v~~ll~~~g~~~~~~~di~~~~~~k~l~N~~~ 230 (375)
T 1yj8_A 172 ANIAMDVAMENFSEAT---IGGN--DKDSLVIWQRVFDLPYFKINCVNETIEVEICGALKNIIT 230 (375)
T ss_dssp SCCHHHHHTTCCEEEE---EECS--CHHHHHHHHHHHCBTTEEEEEESCSHHHHHHHHHHHHHH
T ss_pred CchHHHHHhCCCeEEE---EecC--CHHHHHHHHHHhCCCCeEEEEeCCcHHHHHHHHHHHHHH
Confidence 4432222345443332 1221 235678899999999999888887666666655444433
No 58
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=99.59 E-value=6.7e-15 Score=138.38 Aligned_cols=174 Identities=14% Similarity=0.137 Sum_probs=118.0
Q ss_pred CeEEEEcccHHHHHHHHHHHHcCCeEEEEcC--CCCcHHHHHhCCC-----------ceec--ChhhHhhcCCCEEEEec
Q 044593 32 LKIAVIGFGNFGQFLAKAFARHHHTLLVHSR--SDHSPAVRQQLNA-----------PFFA--DLNDLCELHPDVVLLST 96 (335)
Q Consensus 32 ~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr--~~~~~~~a~~~g~-----------~~~~--~~~~~~~~~aDvVIlav 96 (335)
|||+|||+|.||+.+|..|.++|++|++||| +++..+...+.|. ...+ ++.+.+ .++|+||+|+
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~D~vi~~v 79 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCL-ENAEVVLLGV 79 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHH-TTCSEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHH-hcCCEEEEcC
Confidence 6899999999999999999999999999999 8776665666553 2333 555656 7899999999
Q ss_pred CchhHHHHHhhccccccCCccEEEEcC-CC---CchHHHHHHhhCCC--CCceEeccccCCCCCcccccCCCcceecccc
Q 044593 97 SILSTQSVLKSIPFQRLKRSTLFVDVL-SV---KEFPRNLFLKYLPQ--DFDILCTHPMFGPESAKSSWENLPFMYDKVR 170 (335)
Q Consensus 97 p~~~~~~vl~~l~~~~l~~~~iVvd~~-Sv---K~~~~~~l~~~l~~--~~~~v~~HPmaG~~~~~~~~~g~~~i~~~~~ 170 (335)
|...+.+++.++. + ++++++|++++ ++ +....+.+.+.++. +..+ ....+.||........+.+..+.
T Consensus 80 ~~~~~~~v~~~i~-~-l~~~~~vv~~~ng~~~~~~~~~~~l~~~~~~~~g~~~-~~~~~~~p~~~~~~~~g~~~~~~--- 153 (335)
T 1txg_A 80 STDGVLPVMSRIL-P-YLKDQYIVLISKGLIDFDNSVLTVPEAVWRLKHDLRE-RTVAITGPAIAREVAKRMPTTVV--- 153 (335)
T ss_dssp CGGGHHHHHHHHT-T-TCCSCEEEECCCSEEEETTEEEEHHHHHHTTSTTCGG-GEEEEESSCCHHHHHTTCCEEEE---
T ss_pred ChHHHHHHHHHHh-c-CCCCCEEEEEcCcCccCCCCcCccHHHHHHHhcCCCC-cEEEEECCCcHHHHHccCCcEEE---
Confidence 9999999999995 6 88899999986 44 22122334444432 1101 11224455543222334433222
Q ss_pred cCCChhHHHHHHHHHHHHHhcCCEEEEeChHHHHHHHHHhhhhH
Q 044593 171 IGNDEERIKRVDKFLDVFAKEGCRMVEMSCFDHDKYAAGSQFVT 214 (335)
Q Consensus 171 ~~~~~~~~~~~~~v~~l~~~~G~~v~~~~~~eHD~~~A~~s~lp 214 (335)
++.. +.+..+.++++|+..|.+++..+.-.+..+.+++.+..
T Consensus 154 ~~~~--~~~~~~~~~~ll~~~g~~~~~~~di~~~~~~k~~~N~~ 195 (335)
T 1txg_A 154 FSSP--SESSANKMKEIFETEYFGVEVTTDIIGTEITSALKNVY 195 (335)
T ss_dssp EECS--CHHHHHHHHHHHCBTTEEEEEESCHHHHHHHHHHHHHH
T ss_pred EEeC--CHHHHHHHHHHhCCCcEEEEecCchHHHHHHHHHHHHH
Confidence 1222 24567889999999999888887777766665544433
No 59
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=99.58 E-value=8.4e-15 Score=130.06 Aligned_cols=167 Identities=14% Similarity=0.152 Sum_probs=111.9
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCchhHHHHHhhc
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILSTQSVLKSI 108 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~~~~vl~~l 108 (335)
..+|||+|||+|.||..++..|.+.|++|+++||+++..+...+.|+... +..+++ .++|+||+|+|......++. +
T Consensus 26 ~~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~-~~~~~~-~~~DvVi~av~~~~~~~v~~-l 102 (215)
T 2vns_A 26 DEAPKVGILGSGDFARSLATRLVGSGFKVVVGSRNPKRTARLFPSAAQVT-FQEEAV-SSPEVIFVAVFREHYSSLCS-L 102 (215)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSBTTSEEE-EHHHHT-TSCSEEEECSCGGGSGGGGG-G
T ss_pred CCCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcee-cHHHHH-hCCCEEEECCChHHHHHHHH-H
Confidence 35689999999999999999999999999999999876665555576654 666766 78999999999887666665 5
Q ss_pred cccccCCccEEEEcCCCCchH--------HHHHHhhCCCCCceEe-ccccCCCCCcccccCCCcceecccccCCChhHHH
Q 044593 109 PFQRLKRSTLFVDVLSVKEFP--------RNLFLKYLPQDFDILC-THPMFGPESAKSSWENLPFMYDKVRIGNDEERIK 179 (335)
Q Consensus 109 ~~~~l~~~~iVvd~~SvK~~~--------~~~l~~~l~~~~~~v~-~HPmaG~~~~~~~~~g~~~i~~~~~~~~~~~~~~ 179 (335)
. +.+ ++++|+|+++..... .+.+.+.++. .+++. .+++.+.........+...++. .+. +.+
T Consensus 103 ~-~~~-~~~~vv~~s~g~~~~~l~~~~~~~~~l~~~l~~-~~vv~~~n~~~~~~~~~~~~~g~~~~~~---~g~---~~~ 173 (215)
T 2vns_A 103 S-DQL-AGKILVDVSNPTEQEHLQHRESNAEYLASLFPT-CTVVKAFNVISAWTLQAGPRDGNRQVPI---CGD---QPE 173 (215)
T ss_dssp H-HHH-TTCEEEECCCCCHHHHHHCSSCHHHHHHHHCTT-SEEEEECTTBCHHHHHTCSCSSCCEEEE---EES---CHH
T ss_pred H-Hhc-CCCEEEEeCCCcccccccccccHHHHHHHHCCC-CeEEeccccccHhHhcccccCCceeEEE---ecC---CHH
Confidence 3 344 789999998875421 2344466653 34443 2333322211111123221221 222 245
Q ss_pred HHHHHHHHHHhcCCEEEEeChHHHHHHH
Q 044593 180 RVDKFLDVFAKEGCRMVEMSCFDHDKYA 207 (335)
Q Consensus 180 ~~~~v~~l~~~~G~~v~~~~~~eHD~~~ 207 (335)
..+.++++|+.+|.+++.+++......+
T Consensus 174 ~~~~v~~ll~~~G~~~~~~g~~~~~~~~ 201 (215)
T 2vns_A 174 AKRAVSEMALAMGFMPVDMGSLASAWEV 201 (215)
T ss_dssp HHHHHHHHHHHTTCEEEECCSGGGHHHH
T ss_pred HHHHHHHHHHHcCCceEeecchhhhhHh
Confidence 7788999999999999999876554443
No 60
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=99.57 E-value=1.1e-13 Score=134.84 Aligned_cols=174 Identities=15% Similarity=0.117 Sum_probs=121.0
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhC------------------CCceecChhhHhhcCC
Q 044593 28 KSTSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQL------------------NAPFFADLNDLCELHP 89 (335)
Q Consensus 28 ~~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~------------------g~~~~~~~~~~~~~~a 89 (335)
.+.+|||+|||+|.||..+|..|++ |++|++||++++..+...+. ++..++++.+++ ++|
T Consensus 33 ~~~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~-~~a 110 (432)
T 3pid_A 33 GSEFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHDAY-RNA 110 (432)
T ss_dssp --CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHH-TTC
T ss_pred ccCCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEEEcCHHHHH-hCC
Confidence 3567899999999999999999998 99999999998876644431 345567877777 899
Q ss_pred CEEEEecCch-----------hHHHHHhhccccccCCccEEEEcCCCCchHHHHHHhhCCCCCceEeccccCCCCCccc-
Q 044593 90 DVVLLSTSIL-----------STQSVLKSIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQDFDILCTHPMFGPESAKS- 157 (335)
Q Consensus 90 DvVIlavp~~-----------~~~~vl~~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~~~~~v~~HPmaG~~~~~~- 157 (335)
|+||+|||.. .+.++++.+. + ++++++|++.+++.....+.+.+.+... .+...|.++.+....
T Consensus 111 DvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~-~-l~~g~iVV~~STv~pgtt~~l~~~l~~~--~v~~sPe~~~~G~A~~ 186 (432)
T 3pid_A 111 DYVIIATPTDYDPKTNYFNTSTVEAVIRDVT-E-INPNAVMIIKSTIPVGFTRDIKERLGID--NVIFSPEFLREGRALY 186 (432)
T ss_dssp SEEEECCCCEEETTTTEEECHHHHHHHHHHH-H-HCTTSEEEECSCCCTTHHHHHHHHHTCC--CEEECCCCCCTTSHHH
T ss_pred CEEEEeCCCccccccccccHHHHHHHHHHHH-h-cCCCcEEEEeCCCChHHHHHHHHHHhhc--cEeecCccCCcchhhh
Confidence 9999999986 4778888885 5 8999999999999887778777766542 455578887664310
Q ss_pred ccCCCcceecccccCCChhHHHHHHHHHHHHHh--cC--CEEEEeChHHHHHHHHHhhhhHH
Q 044593 158 SWENLPFMYDKVRIGNDEERIKRVDKFLDVFAK--EG--CRMVEMSCFDHDKYAAGSQFVTH 215 (335)
Q Consensus 158 ~~~g~~~i~~~~~~~~~~~~~~~~~~v~~l~~~--~G--~~v~~~~~~eHD~~~A~~s~lph 215 (335)
.+...+.++ ++.+. +.++.+.+++.. ++ ..++.+++. -.+++.++.+.-.
T Consensus 187 ~~l~p~rIv----vG~~~---~~~~~~~~ll~~~~~~~~~~v~~~~~~-~AE~~Kl~~N~~~ 240 (432)
T 3pid_A 187 DNLHPSRIV----IGERS---ARAERFADLLKEGAIKQDIPTLFTDST-EAEAIKLFANTYL 240 (432)
T ss_dssp HHHSCSCEE----ESSCS---HHHHHHHHHHHHHCSSSSCCEEECCHH-HHHHHHHHHHHHH
T ss_pred cccCCceEE----ecCCH---HHHHHHHHHHHhhhccCCCeEEecCcc-HHHHHHHHHHHHH
Confidence 001111222 34443 356777888875 43 345566554 4566776655444
No 61
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=99.57 E-value=2.1e-14 Score=134.71 Aligned_cols=160 Identities=13% Similarity=0.089 Sum_probs=119.7
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHH-----------hCCC--------------ceecChhh
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQ-----------QLNA--------------PFFADLND 83 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~-----------~~g~--------------~~~~~~~~ 83 (335)
+...||+|||+|.||+.||..++.+|++|++||++++..+.+. +.|. ..++++.+
T Consensus 4 p~~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~~~l~~ 83 (319)
T 3ado_A 4 PAAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAE 83 (319)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHH
T ss_pred CCCCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccccchHh
Confidence 3467999999999999999999999999999999987543221 1121 23567777
Q ss_pred HhhcCCCEEEEecCchh--HHHHHhhccccccCCccEEEEcCCCCchHHHHHHhhCCCCCceEeccccCCCCCcccccCC
Q 044593 84 LCELHPDVVLLSTSILS--TQSVLKSIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQDFDILCTHPMFGPESAKSSWEN 161 (335)
Q Consensus 84 ~~~~~aDvVIlavp~~~--~~~vl~~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~~~~~v~~HPmaG~~~~~~~~~g 161 (335)
.+ ++||+||-|+|.+. -.+++.++. ..+++++++...+|+ ..+..+.+.+...-+|++.||...+..-
T Consensus 84 a~-~~ad~ViEav~E~l~iK~~lf~~l~-~~~~~~aIlaSNTSs--l~is~ia~~~~~p~r~ig~HffNP~~~m------ 153 (319)
T 3ado_A 84 AV-EGVVHIQECVPENLDLKRKIFAQLD-SIVDDRVVLSSSSSC--LLPSKLFTGLAHVKQCIVAHPVNPPYYI------ 153 (319)
T ss_dssp HT-TTEEEEEECCCSCHHHHHHHHHHHH-TTCCSSSEEEECCSS--CCHHHHHTTCTTGGGEEEEEECSSTTTC------
T ss_pred Hh-ccCcEEeeccccHHHHHHHHHHHHH-HHhhhcceeehhhhh--ccchhhhhhccCCCcEEEecCCCCcccc------
Confidence 66 89999999999875 578999995 678999999887766 4456677666655689999998776642
Q ss_pred CcceecccccCCChhHHHHHHHHHHHHHhcCCEEEEeChHH
Q 044593 162 LPFMYDKVRIGNDEERIKRVDKFLDVFAKEGCRMVEMSCFD 202 (335)
Q Consensus 162 ~~~i~~~~~~~~~~~~~~~~~~v~~l~~~~G~~v~~~~~~e 202 (335)
| +++ +++++.++.+.++.+.++.+.+|.+++.+..+.
T Consensus 154 -~-LVE--iv~g~~Ts~~~~~~~~~~~~~~gk~pv~v~kd~ 190 (319)
T 3ado_A 154 -P-LVE--LVPHPETSPATVDRTHALMRKIGQSPVRVLKEI 190 (319)
T ss_dssp -C-EEE--EEECTTCCHHHHHHHHHHHHHTTCEEEECSSCC
T ss_pred -c-hHH--hcCCCCCcHHHHHHHHHHHHHhCCccCCcCCCC
Confidence 2 222 234566778889999999999999988775443
No 62
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=99.57 E-value=2e-14 Score=141.34 Aligned_cols=176 Identities=16% Similarity=0.159 Sum_probs=117.3
Q ss_pred CeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHh-------------------C-CCceecChhhHhhcCCCE
Q 044593 32 LKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQ-------------------L-NAPFFADLNDLCELHPDV 91 (335)
Q Consensus 32 ~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~-------------------~-g~~~~~~~~~~~~~~aDv 91 (335)
|||+|||+|.||..+|..|.++|++|++||++++..+...+ . ++..++++.+++ +++|+
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~-~~aDv 81 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAV-PEADI 81 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHG-GGCSE
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHH-hcCCE
Confidence 79999999999999999999999999999999876654433 1 134566777776 78999
Q ss_pred EEEecCch----------hHHHHHhhccccccCCccEEEEcCCCCchHHHHHHhhCCC---CCc-eEeccccCCCCCccc
Q 044593 92 VLLSTSIL----------STQSVLKSIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQ---DFD-ILCTHPMFGPESAKS 157 (335)
Q Consensus 92 VIlavp~~----------~~~~vl~~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~---~~~-~v~~HPmaG~~~~~~ 157 (335)
||+|||.. .+.++++++. +.++++++|++.+++.....+.+.+.+.. +.. .+..+-..||+...+
T Consensus 82 ViiaVptp~~~~~~~dl~~v~~v~~~i~-~~l~~g~iVV~~STv~pgt~~~l~~~l~~~~~~~~~~~d~~v~~~Pe~a~e 160 (450)
T 3gg2_A 82 IFIAVGTPAGEDGSADMSYVLDAARSIG-RAMSRYILIVTKSTVPVGSYRLIRKAIQEELDKREVLIDFDIASNPEFLKE 160 (450)
T ss_dssp EEECCCCCBCTTSSBCCHHHHHHHHHHH-HHCCSCEEEEECSCCCTTHHHHHHHHHHHHHHHTTCCCCEEEEECCCCCCT
T ss_pred EEEEcCCCcccCCCcChHHHHHHHHHHH-hhCCCCCEEEEeeeCCCcchHHHHHHHHHhccccCcCcceeEEechhhhcc
Confidence 99999988 7889999985 67899999999998765555544433211 000 011122335554322
Q ss_pred ccC----CCc-ceecccccCCChhHHHHHHHHHHHHHhcCC---EEEEeChHHHHHHHHHhhhhHHH
Q 044593 158 SWE----NLP-FMYDKVRIGNDEERIKRVDKFLDVFAKEGC---RMVEMSCFDHDKYAAGSQFVTHT 216 (335)
Q Consensus 158 ~~~----g~~-~i~~~~~~~~~~~~~~~~~~v~~l~~~~G~---~v~~~~~~eHD~~~A~~s~lph~ 216 (335)
+.. ..| .++ ++++ +++..+.++++++.++. .++..+. .--+++.+..+.-..
T Consensus 161 G~~~~~~~~p~~iv----vG~~--~~~~~~~~~~l~~~~~~~~~~~~~~d~-~~aE~~Kl~~N~~~a 220 (450)
T 3gg2_A 161 GNAIDDFMKPDRVV----VGVD--SDRARELITSLYKPMLLNNFRVLFMDI-ASAEMTKYAANAMLA 220 (450)
T ss_dssp TSHHHHHHSCSCEE----EEES--SHHHHHHHHHHHTTTCCSCCCEEEECH-HHHHHHHHHHHHHHH
T ss_pred cchhhhccCCCEEE----EEcC--CHHHHHHHHHHHHHHhcCCCeEEecCH-HHHHHHHHHHHHHHH
Confidence 111 111 122 2332 24577889999998875 3444454 445677776665443
No 63
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=99.56 E-value=3e-14 Score=139.55 Aligned_cols=175 Identities=15% Similarity=0.171 Sum_probs=115.5
Q ss_pred CeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHh-------------------CC-CceecChhhHhhcCCCE
Q 044593 32 LKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQ-------------------LN-APFFADLNDLCELHPDV 91 (335)
Q Consensus 32 ~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~-------------------~g-~~~~~~~~~~~~~~aDv 91 (335)
|||+|||+|.||..+|..|.++|++|++||++++..+...+ .| +..++++.+.+ .++|+
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~-~~aDv 79 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAV-LDSDV 79 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHH-HTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHh-ccCCE
Confidence 69999999999999999999999999999999877654444 23 44566777666 79999
Q ss_pred EEEecCchh----------HHHHHhhccccccCC---ccEEEEcCCCCchH-HHHHHhhCCC--CCce-EeccccCCCCC
Q 044593 92 VLLSTSILS----------TQSVLKSIPFQRLKR---STLFVDVLSVKEFP-RNLFLKYLPQ--DFDI-LCTHPMFGPES 154 (335)
Q Consensus 92 VIlavp~~~----------~~~vl~~l~~~~l~~---~~iVvd~~SvK~~~-~~~l~~~l~~--~~~~-v~~HPmaG~~~ 154 (335)
||+|||... +.++++++. +.+++ +++|++.+++.... .+.+.+.++. +..+ +..+-+++|+.
T Consensus 80 viiaVptp~~~~~~~dl~~v~~v~~~i~-~~l~~~~~~~iVV~~Stv~~g~t~~~l~~~l~~~~g~~~~~~~~v~~~Pe~ 158 (436)
T 1mv8_A 80 SFICVGTPSKKNGDLDLGYIETVCREIG-FAIREKSERHTVVVRSTVLPGTVNNVVIPLIEDCSGKKAGVDFGVGTNPEF 158 (436)
T ss_dssp EEECCCCCBCTTSSBCCHHHHHHHHHHH-HHHTTCCSCCEEEECSCCCTTHHHHTHHHHHHHHHSCCBTTTBEEEECCCC
T ss_pred EEEEcCCCcccCCCcchHHHHHHHHHHH-HHhcccCCCcEEEEeCCcCCCchHHHHHHHHHHhcCcccCCcEEEEECccc
Confidence 999999766 888888885 57888 89999988776544 4444433321 1111 11111223443
Q ss_pred ccccc-----CCCcceecccccCCChhHHHHHHHHHHHHHhcCCEEEEeChHHHHHHHHHhhhhHH
Q 044593 155 AKSSW-----ENLPFMYDKVRIGNDEERIKRVDKFLDVFAKEGCRMVEMSCFDHDKYAAGSQFVTH 215 (335)
Q Consensus 155 ~~~~~-----~g~~~i~~~~~~~~~~~~~~~~~~v~~l~~~~G~~v~~~~~~eHD~~~A~~s~lph 215 (335)
..++. ...+.++ ++.+ +++..+.++++++.+|..++. +...+..+++++.+.-+
T Consensus 159 ~~~G~~~~~~~~~~~iv----~G~~--~~~~~~~~~~l~~~~~~~v~~-~~~~~ae~~Kl~~N~~~ 217 (436)
T 1mv8_A 159 LRESTAIKDYDFPPMTV----IGEL--DKQTGDLLEEIYRELDAPIIR-KTVEVAEMIKYTCNVWH 217 (436)
T ss_dssp CCTTSHHHHHHSCSCEE----EEES--SHHHHHHHHHHHTTSSSCEEE-EEHHHHHHHHHHHHHHH
T ss_pred ccccccchhccCCCEEE----EEcC--CHHHHHHHHHHHhccCCCEEc-CCHHHHHHHHHHHHHHH
Confidence 21110 0111222 2322 245667889999999987666 44556667777665544
No 64
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=99.56 E-value=7.5e-14 Score=138.35 Aligned_cols=182 Identities=15% Similarity=0.122 Sum_probs=121.4
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHc--CCeEEEEcCCCCcHHHHHhC-------------------CCceecChhhHhhc
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARH--HHTLLVHSRSDHSPAVRQQL-------------------NAPFFADLNDLCEL 87 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~--G~~V~~~dr~~~~~~~a~~~-------------------g~~~~~~~~~~~~~ 87 (335)
+++|||+|||+|.||..+|..|.++ |++|++||++++..+...+. ++..++++.+.+ .
T Consensus 7 ~~~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~~~~-~ 85 (481)
T 2o3j_A 7 GKVSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAI-A 85 (481)
T ss_dssp CCCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHH-H
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHh-h
Confidence 3468999999999999999999998 78999999998776644431 223445665666 7
Q ss_pred CCCEEEEecCch---------------hHHHHHhhccccccCCccEEEEcCCCCchHHHHHHhhCCC------CC-ceEe
Q 044593 88 HPDVVLLSTSIL---------------STQSVLKSIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQ------DF-DILC 145 (335)
Q Consensus 88 ~aDvVIlavp~~---------------~~~~vl~~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~------~~-~~v~ 145 (335)
++|+||+|||.. .+.++++.+. +.++++++|++.+++.....+.+.+.+.. +. .++.
T Consensus 86 ~aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~-~~l~~g~iVV~~STv~~gt~~~l~~~l~~~~~~~~~~d~~v~ 164 (481)
T 2o3j_A 86 EADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIA-QYAGGPKIVVEKSTVPVKAAESIGCILREAQKNNENLKFQVL 164 (481)
T ss_dssp HCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHH-HHCCSCEEEEECSCCCTTHHHHHHHHHHHHTC----CCEEEE
T ss_pred cCCEEEEecCCccccccccccCCCcHHHHHHHHHHHH-HhCCCCCEEEECCCCCCCHHHHHHHHHHHhhCcCcCCceEEE
Confidence 899999998764 2778888885 67899999999888776555555443321 12 2466
Q ss_pred ccccCCCCCcc--cccCCCcceecccccCCC--hhHHHHHHHHHHHHHhcCC-EEEEeChHHHHHHHHHhhhhHHHH
Q 044593 146 THPMFGPESAK--SSWENLPFMYDKVRIGND--EERIKRVDKFLDVFAKEGC-RMVEMSCFDHDKYAAGSQFVTHTM 217 (335)
Q Consensus 146 ~HPmaG~~~~~--~~~~g~~~i~~~~~~~~~--~~~~~~~~~v~~l~~~~G~-~v~~~~~~eHD~~~A~~s~lph~l 217 (335)
.+|-+..+... +...... ++ ++++ ...++..+.++++++.+|. .++.++...-..+++++.+..+.+
T Consensus 165 ~~Pe~~~~G~a~~~~~~~~~-iv----iG~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~d~~~ae~~Kl~~N~~~a~ 236 (481)
T 2o3j_A 165 SNPEFLAEGTAMKDLANPDR-VL----IGGESSPEGLQAVAELVRIYENWVPRNRIITTNTWSSELSKLVANAFLAQ 236 (481)
T ss_dssp ECCCCCCTTCHHHHHHSCSC-EE----EEECSSHHHHHHHHHHHHHHHTTSCGGGEEEEEHHHHHHHHHHHHHHHHH
T ss_pred eCcccccccchhhcccCCCE-EE----EEecCchhhHHHHHHHHHHHHhhcCCCeEEecCHHHHHHHHHHHHHHHHH
Confidence 67765433210 0011111 22 2222 2223567889999999985 555555455578888887776544
No 65
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=99.56 E-value=4.8e-14 Score=139.09 Aligned_cols=158 Identities=13% Similarity=0.075 Sum_probs=113.0
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHh-----------CC-----------CceecChhhHh
Q 044593 28 KSTSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQ-----------LN-----------APFFADLNDLC 85 (335)
Q Consensus 28 ~~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~-----------~g-----------~~~~~~~~~~~ 85 (335)
.+..+||+|||+|.||+.||..|.++|++|++||++++..+.+.+ .| ...+++.+ .+
T Consensus 34 ~~~~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~-~~ 112 (463)
T 1zcj_A 34 AQPVSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTK-EL 112 (463)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCGG-GG
T ss_pred cCCCCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCHH-HH
Confidence 445789999999999999999999999999999999875543322 11 12345664 44
Q ss_pred hcCCCEEEEecCchh--HHHHHhhccccccCCccEEEEcCCCCchHHHHHHhhCCCCCceEeccccCCCCCcccccCCCc
Q 044593 86 ELHPDVVLLSTSILS--TQSVLKSIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQDFDILCTHPMFGPESAKSSWENLP 163 (335)
Q Consensus 86 ~~~aDvVIlavp~~~--~~~vl~~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~~~~~v~~HPmaG~~~~~~~~~g~~ 163 (335)
.+||+||+|+|.+. ...++.++. +.++++++|++.+|. .....+.+.+....+|++.||+..... ...
T Consensus 113 -~~aDlVIeaVpe~~~~k~~v~~~l~-~~~~~~~ii~snTs~--~~~~~la~~~~~~~~~ig~hf~~P~~~------~~l 182 (463)
T 1zcj_A 113 -STVDLVVEAVFEDMNLKKKVFAELS-ALCKPGAFLCTNTSA--LNVDDIASSTDRPQLVIGTHFFSPAHV------MRL 182 (463)
T ss_dssp -TTCSEEEECCCSCHHHHHHHHHHHH-HHSCTTCEEEECCSS--SCHHHHHTTSSCGGGEEEEEECSSTTT------CCE
T ss_pred -CCCCEEEEcCCCCHHHHHHHHHHHH-hhCCCCeEEEeCCCC--cCHHHHHHHhcCCcceEEeecCCCccc------cee
Confidence 78999999999874 467888884 578899999874433 344566666654457999999853221 111
Q ss_pred ceecccccCCChhHHHHHHHHHHHHHhcCCEEEEeCh
Q 044593 164 FMYDKVRIGNDEERIKRVDKFLDVFAKEGCRMVEMSC 200 (335)
Q Consensus 164 ~i~~~~~~~~~~~~~~~~~~v~~l~~~~G~~v~~~~~ 200 (335)
+.+ +.++.++++.++.+.++++.+|..++++..
T Consensus 183 vev----v~g~~t~~e~~~~~~~l~~~lGk~~v~v~~ 215 (463)
T 1zcj_A 183 LEV----IPSRYSSPTTIATVMSLSKKIGKIGVVVGN 215 (463)
T ss_dssp EEE----EECSSCCHHHHHHHHHHHHHTTCEEEEBCC
T ss_pred EEE----eCCCCCCHHHHHHHHHHHHHhCCEEEEECC
Confidence 111 233344567889999999999999888863
No 66
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=99.55 E-value=6.3e-14 Score=132.96 Aligned_cols=205 Identities=11% Similarity=0.137 Sum_probs=130.6
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcC-------CeEEEEcCCCC-----cHHHHHhC--------------CCceecChh
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHH-------HTLLVHSRSDH-----SPAVRQQL--------------NAPFFADLN 82 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G-------~~V~~~dr~~~-----~~~~a~~~--------------g~~~~~~~~ 82 (335)
|..|||+|||+|.||+++|..|.++| ++|++|||+++ ..+...+. ++..++++.
T Consensus 6 m~~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (354)
T 1x0v_A 6 MASKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVPDVV 85 (354)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEESSHH
T ss_pred cCCCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEcCHH
Confidence 44679999999999999999999999 99999999987 55443321 123345676
Q ss_pred hHhhcCCCEEEEecCchhHHHHHhhccccccCCccEEEEcCCCCc-------hHHHHHHhhCCCCCceEeccccCCCCCc
Q 044593 83 DLCELHPDVVLLSTSILSTQSVLKSIPFQRLKRSTLFVDVLSVKE-------FPRNLFLKYLPQDFDILCTHPMFGPESA 155 (335)
Q Consensus 83 ~~~~~~aDvVIlavp~~~~~~vl~~l~~~~l~~~~iVvd~~SvK~-------~~~~~l~~~l~~~~~~v~~HPmaG~~~~ 155 (335)
+++ .++|+||+|||...+.++++++. +.++++++|+++++.-. .+.+.+.+.++.. ..+ ..||...
T Consensus 86 ~~~-~~aD~Vilav~~~~~~~v~~~i~-~~l~~~~ivv~~~~Gi~~~~~~~~~l~~~l~~~~~~~-~~v----~~gp~~a 158 (354)
T 1x0v_A 86 QAA-EDADILIFVVPHQFIGKICDQLK-GHLKANATGISLIKGVDEGPNGLKLISEVIGERLGIP-MSV----LMGANIA 158 (354)
T ss_dssp HHH-TTCSEEEECCCGGGHHHHHHHHT-TCSCTTCEEEECCCCBCSSSSSCCBHHHHHHHHHTCC-EEE----EECSCCH
T ss_pred HHH-cCCCEEEEeCCHHHHHHHHHHHH-hhCCCCCEEEEECCccCCCCCccccHHHHHHHHcCCC-EEE----EECCCcH
Confidence 766 78999999999999999999995 67889999999865321 2234444443311 111 2234332
Q ss_pred ccccCCCcceecccccCCChhHHHHHHHHHHHHHhcCCEEEEeChHHHHHHHHHhhhhHHHHHHHHHHcCCCCC---CCC
Q 044593 156 KSSWENLPFMYDKVRIGNDEERIKRVDKFLDVFAKEGCRMVEMSCFDHDKYAAGSQFVTHTMGRVLERFGVESS---PIN 232 (335)
Q Consensus 156 ~~~~~g~~~i~~~~~~~~~~~~~~~~~~v~~l~~~~G~~v~~~~~~eHD~~~A~~s~lph~la~aL~~~~~~~~---~~~ 232 (335)
.....+.+..+. ++.. +.+..+.++++|+..|.+++..+...+..+.+++-+..+....++........ .+.
T Consensus 159 ~~v~~g~~~~~~---~~~~--~~~~~~~v~~ll~~~g~~~~~~~di~~~~~~k~~~N~~~~~~g~~~~~~~~~n~~~~~~ 233 (354)
T 1x0v_A 159 SEVADEKFCETT---IGCK--DPAQGQLLKELMQTPNFRITVVQEVDTVEICGALKNVVAVGAGFCDGLGFGDNTKAAVI 233 (354)
T ss_dssp HHHHTTCCEEEE---EECS--SHHHHHHHHHHHCBTTEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHhcCCceEE---EEEC--CHHHHHHHHHHhCCCCEEEEEcCCchHhHHHHHHHHHHHHHHHHHHHccCCccHHHHHH
Confidence 222345443332 1221 24567889999999999988888766666666655544433222222222110 122
Q ss_pred CcchhhHHHHHHH
Q 044593 233 TKGYETLLDLVDN 245 (335)
Q Consensus 233 ~~gf~~~~rl~~~ 245 (335)
..+++.+.+++..
T Consensus 234 ~~~~~E~~~la~a 246 (354)
T 1x0v_A 234 RLGLMEMIAFAKL 246 (354)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3456666676665
No 67
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=99.55 E-value=8.6e-14 Score=136.42 Aligned_cols=173 Identities=14% Similarity=0.181 Sum_probs=115.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhC--------------------CCceecChhhHhhcCCC
Q 044593 31 SLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQL--------------------NAPFFADLNDLCELHPD 90 (335)
Q Consensus 31 ~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~--------------------g~~~~~~~~~~~~~~aD 90 (335)
.-+|+|||+|.||..+|..|.++||+|++||++++..+...+. ++..++++.+++ ++||
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~-~~aD 86 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGV-KDAD 86 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHH-TTCS
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHH-hcCC
Confidence 4689999999999999999999999999999999887654431 134567887777 7999
Q ss_pred EEEEecCch-----------hHHHHHhhccccccCCccEEEEcCCCCchHHHHHHhhC----CCCCceEeccccCCCCCc
Q 044593 91 VVLLSTSIL-----------STQSVLKSIPFQRLKRSTLFVDVLSVKEFPRNLFLKYL----PQDFDILCTHPMFGPESA 155 (335)
Q Consensus 91 vVIlavp~~-----------~~~~vl~~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l----~~~~~~v~~HPmaG~~~~ 155 (335)
+||+|||.. .+.++++.+. +.++++++|++.+++.....+.+.+.+ +..-..+.. +|+..
T Consensus 87 vvii~Vptp~~~~~~~~Dl~~v~~v~~~i~-~~l~~g~iVV~~STv~pgtt~~l~~~l~e~~~~~d~~v~~----~Pe~a 161 (446)
T 4a7p_A 87 AVFIAVGTPSRRGDGHADLSYVFAAAREIA-ENLTKPSVIVTKSTVPVGTGDEVERIIAEVAPNSGAKVVS----NPEFL 161 (446)
T ss_dssp EEEECCCCCBCTTTCCBCTHHHHHHHHHHH-HSCCSCCEEEECSCCCTTHHHHHHHHHHHHSTTSCCEEEE----CCCCC
T ss_pred EEEEEcCCCCccccCCccHHHHHHHHHHHH-HhcCCCCEEEEeCCCCchHHHHHHHHHHHhCCCCCceEEe----Ccccc
Confidence 999997655 4788888885 678999999999887765555544332 211112333 44443
Q ss_pred ccccC----CCc-ceecccccCCChhHHHHHHHHHHHHHhcCCE---EEEeChHHHHHHHHHhhhhHH
Q 044593 156 KSSWE----NLP-FMYDKVRIGNDEERIKRVDKFLDVFAKEGCR---MVEMSCFDHDKYAAGSQFVTH 215 (335)
Q Consensus 156 ~~~~~----g~~-~i~~~~~~~~~~~~~~~~~~v~~l~~~~G~~---v~~~~~~eHD~~~A~~s~lph 215 (335)
.++-. ..| .++ ++++ +++..+.++++++.++.+ ++.++...--+++.+..+.-.
T Consensus 162 ~eG~a~~d~~~p~~iv----vG~~--~~~~~~~~~~ly~~~~~~~~~~~~~~d~~~aE~~Kl~~N~~~ 223 (446)
T 4a7p_A 162 REGAAIEDFKRPDRVV----VGTE--DEFARQVMREIYRPLSLNQSAPVLFTGRRTSELIKYAANAFL 223 (446)
T ss_dssp CTTSHHHHHHSCSCEE----EECS--CHHHHHHHHHHHCSCC-----CEEEECHHHHHHHHHHHHHHH
T ss_pred cccchhhhccCCCEEE----EeCC--cHHHHHHHHHHHHHHhcCCCeEEEeCCHHHHHHHHHHHHHHH
Confidence 22111 112 222 2443 245678889999988764 355544455566776665544
No 68
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=99.54 E-value=3.5e-14 Score=146.95 Aligned_cols=157 Identities=15% Similarity=0.075 Sum_probs=115.3
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHH-----------HhCC-------------CceecChhhH
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVR-----------QQLN-------------APFFADLNDL 84 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a-----------~~~g-------------~~~~~~~~~~ 84 (335)
...+||+|||+|.||+.||..|.++|++|++||++++..+.+ .+.| +..++++ +.
T Consensus 312 ~~i~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~~ 390 (715)
T 1wdk_A 312 KDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSY-GD 390 (715)
T ss_dssp CCCSSEEEECCHHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEESSS-TT
T ss_pred ccCCEEEEECCChhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEEECCH-HH
Confidence 457899999999999999999999999999999998765432 2234 2344566 44
Q ss_pred hhcCCCEEEEecCchh--HHHHHhhccccccCCccEEEEcCCCCchHHHHHHhhCCCCCceEeccccCCCCCcccccCCC
Q 044593 85 CELHPDVVLLSTSILS--TQSVLKSIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQDFDILCTHPMFGPESAKSSWENL 162 (335)
Q Consensus 85 ~~~~aDvVIlavp~~~--~~~vl~~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~~~~~v~~HPmaG~~~~~~~~~g~ 162 (335)
+ .+||+||+|+|.+. ...++.++. +.++++++|++.+|+- .+..+.+.+....+|++.||+.+.... .
T Consensus 391 ~-~~aDlVIeaV~e~~~vk~~v~~~l~-~~~~~~~IlasntStl--~i~~la~~~~~~~~~ig~hf~~P~~~~------~ 460 (715)
T 1wdk_A 391 F-GNVDLVVEAVVENPKVKQAVLAEVE-NHVREDAILASNTSTI--SISLLAKALKRPENFVGMHFFNPVHMM------P 460 (715)
T ss_dssp G-GGCSEEEECCCSCHHHHHHHHHHHH-TTSCTTCEEEECCSSS--CHHHHGGGCSCGGGEEEEECCSSTTTC------C
T ss_pred H-CCCCEEEEcCCCCHHHHHHHHHHHH-hhCCCCeEEEeCCCCC--CHHHHHHHhcCccceEEEEccCCcccC------c
Confidence 5 78999999999775 467888884 6788999998877653 335666666544579999998754421 1
Q ss_pred cceecccccCCChhHHHHHHHHHHHHHhcCCEEEEeCh
Q 044593 163 PFMYDKVRIGNDEERIKRVDKFLDVFAKEGCRMVEMSC 200 (335)
Q Consensus 163 ~~i~~~~~~~~~~~~~~~~~~v~~l~~~~G~~v~~~~~ 200 (335)
.+.+ +.++.++++.++.+.++++.+|..++++..
T Consensus 461 lvev----v~g~~t~~e~~~~~~~l~~~lGk~~v~v~d 494 (715)
T 1wdk_A 461 LVEV----IRGEKSSDLAVATTVAYAKKMGKNPIVVND 494 (715)
T ss_dssp EEEE----EECSSCCHHHHHHHHHHHHHTTCEEEEEES
T ss_pred eEEE----EECCCCCHHHHHHHHHHHHHhCCEeEEEcC
Confidence 1111 223344567889999999999999888763
No 69
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=99.54 E-value=7.5e-14 Score=137.86 Aligned_cols=178 Identities=15% Similarity=0.121 Sum_probs=113.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHHc--CCeEEEEcCCCCcHHHHHh-------------------CCCceecChhhHhhcCC
Q 044593 31 SLKIAVIGFGNFGQFLAKAFARH--HHTLLVHSRSDHSPAVRQQ-------------------LNAPFFADLNDLCELHP 89 (335)
Q Consensus 31 ~~kI~IIG~G~mG~siA~~L~~~--G~~V~~~dr~~~~~~~a~~-------------------~g~~~~~~~~~~~~~~a 89 (335)
+|||+|||+|.||..+|..|.++ |++|++||++++..+...+ .++..++++.+.+ .++
T Consensus 5 ~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~t~~~~e~~-~~a 83 (467)
T 2q3e_A 5 IKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAI-KEA 83 (467)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHH-HHC
T ss_pred ccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHH-hcC
Confidence 58999999999999999999999 8999999999876554321 2445566777666 789
Q ss_pred CEEEEecCchh---------------HHHHHhhccccccCCccEEEEcCCCCchHHHHHHhhCCC-CCceEeccccCCCC
Q 044593 90 DVVLLSTSILS---------------TQSVLKSIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQ-DFDILCTHPMFGPE 153 (335)
Q Consensus 90 DvVIlavp~~~---------------~~~vl~~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~-~~~~v~~HPmaG~~ 153 (335)
|+||+|||... +.++++++. +.++++++|++++++.....+.+.+.+.. +..++.++-+++|+
T Consensus 84 DvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~-~~l~~g~iVV~~STv~~g~~~~l~~~l~~~~~~~~d~~V~~~Pe 162 (467)
T 2q3e_A 84 DLVFISVNTPTKTYGMGKGRAADLKYIEACARRIV-QNSNGYKIVTEKSTVPVRAAESIRRIFDANTKPNLNLQVLSNPE 162 (467)
T ss_dssp SEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHH-HTCCSEEEEEECSCCCTTHHHHHHHHHHHTCCTTCEEEEEECCC
T ss_pred CEEEEEcCCchhhccccccCCCcHHHHHHHHHHHH-hhCCCCCEEEECCcCCchHHHHHHHHHHHhCCCCCCeEEEeCHH
Confidence 99999997644 456777774 56889999999988776555555444321 11122222234444
Q ss_pred CcccccCCCcc--eeccc--ccCCC--hhHHHHHHHHHHHHHhc-CCEEEEeChHHHHHHHHHhhhh
Q 044593 154 SAKSSWENLPF--MYDKV--RIGND--EERIKRVDKFLDVFAKE-GCRMVEMSCFDHDKYAAGSQFV 213 (335)
Q Consensus 154 ~~~~~~~g~~~--i~~~~--~~~~~--~~~~~~~~~v~~l~~~~-G~~v~~~~~~eHD~~~A~~s~l 213 (335)
... .|... +..+. +++++ ..+++..+.++++++.+ |..++.++......++.++.+.
T Consensus 163 ~~~---~G~~~~d~~~~~rivvGg~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~ae~~Kl~~N~ 226 (467)
T 2q3e_A 163 FLA---EGTAIKDLKNPDRVLIGGDETPEGQRAVQALCAVYEHWVPREKILTTNTWSSELSKLAANA 226 (467)
T ss_dssp CCC---TTSHHHHHHSCSCEEEECCSSHHHHHHHHHHHHHHTTTSCGGGEEEECHHHHHHHHHHHHH
T ss_pred Hhh---cccchhhccCCCEEEECCCCCCCCHHHHHHHHHHHHHhccCCeEEecCHHHHHHHHHHHHH
Confidence 422 12211 01110 12331 13566788999999998 6555554444444555554443
No 70
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=99.54 E-value=4.8e-15 Score=141.57 Aligned_cols=167 Identities=13% Similarity=0.168 Sum_probs=110.7
Q ss_pred CeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCC--------------CceecChhhHhhcCCCEEEEecC
Q 044593 32 LKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLN--------------APFFADLNDLCELHPDVVLLSTS 97 (335)
Q Consensus 32 ~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g--------------~~~~~~~~~~~~~~aDvVIlavp 97 (335)
|||+|||+|.||+++|..|.++|++|++|||+++..+...+.+ +..++++.+++ .++|+||+|||
T Consensus 16 ~kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~aDvVilav~ 94 (366)
T 1evy_A 16 NKAVVFGSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAY-NGAEIILFVIP 94 (366)
T ss_dssp EEEEEECCSHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHH-TTCSSEEECCC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccccccccccceeeeCCHHHHH-cCCCEEEECCC
Confidence 3999999999999999999999999999999987665444332 33445677766 78999999999
Q ss_pred chhHHHHHhh----ccccccCC-ccEEEEcC-CCCch----HHHHHHhhCCCCCceEeccccCCCCCcccccCCCcceec
Q 044593 98 ILSTQSVLKS----IPFQRLKR-STLFVDVL-SVKEF----PRNLFLKYLPQDFDILCTHPMFGPESAKSSWENLPFMYD 167 (335)
Q Consensus 98 ~~~~~~vl~~----l~~~~l~~-~~iVvd~~-SvK~~----~~~~l~~~l~~~~~~v~~HPmaG~~~~~~~~~g~~~i~~ 167 (335)
...+.+++.+ +. +.+++ +++|++++ ++... +.+.+.+.++.. .+ ....||........+.+.++.
T Consensus 95 ~~~~~~v~~~~~~gl~-~~l~~~~~ivv~~~~gi~~~~~~~~~~~l~~~~~~~-~~---~v~~gp~~~~~~~~g~~~~~~ 169 (366)
T 1evy_A 95 TQFLRGFFEKSGGNLI-AYAKEKQVPVLVCTKGIERSTLKFPAEIIGEFLPSP-LL---SVLAGPSFAIEVATGVFTCVS 169 (366)
T ss_dssp HHHHHHHHHHHCHHHH-HHHHHHTCCEEECCCSCCTTTCCCHHHHHTTTSCGG-GE---EEEESSCCHHHHHTTCCEEEE
T ss_pred hHHHHHHHHHhHHHHH-HhcCccCCEEEEECCcCCCccccCHHHHHHHHCCCC-cE---EEEeCCChHHHHHhCCceEEE
Confidence 9989999988 85 56778 89999987 33221 223333322211 00 012344432222345443332
Q ss_pred ccccCCChhHHHHHHHHHHHHHhc--CCEEEEeChHHHHHHHHH
Q 044593 168 KVRIGNDEERIKRVDKFLDVFAKE--GCRMVEMSCFDHDKYAAG 209 (335)
Q Consensus 168 ~~~~~~~~~~~~~~~~v~~l~~~~--G~~v~~~~~~eHD~~~A~ 209 (335)
++.. +.+..+.++++|+.. |.+++..+...+..+.++
T Consensus 170 ---~~~~--~~~~~~~v~~ll~~~g~g~~~~~~~di~~~~~~k~ 208 (366)
T 1evy_A 170 ---IASA--DINVARRLQRIMSTGDRSFVCWATTDTVGCEVASA 208 (366)
T ss_dssp ---EECS--SHHHHHHHHHHHSCTTSSEEEEEESCHHHHHHHHH
T ss_pred ---EecC--CHHHHHHHHHHhcCCCCeEEEEEcCCchHHHHHHH
Confidence 1221 235678899999999 888887776555544444
No 71
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=99.53 E-value=3.6e-13 Score=130.52 Aligned_cols=174 Identities=13% Similarity=0.046 Sum_probs=118.1
Q ss_pred CeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCC------------------ceecChhhHhhcCCCEEE
Q 044593 32 LKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNA------------------PFFADLNDLCELHPDVVL 93 (335)
Q Consensus 32 ~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~------------------~~~~~~~~~~~~~aDvVI 93 (335)
|||+|||+|.||..+|..|.+ |++|++||++++..+...+.+. ..+++..+.+ .++|+||
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~~-~~aDvvi 78 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-QNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAY-KEAELVI 78 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHH-HHCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHHHh-cCCCEEE
Confidence 699999999999999999999 9999999999887765555443 2345665655 6899999
Q ss_pred EecCch-----------hHHHHHhhccccccCCccEEEEcCCCCchHHHHHHhhCCCCCceEeccccCCCCCcc-cccCC
Q 044593 94 LSTSIL-----------STQSVLKSIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQDFDILCTHPMFGPESAK-SSWEN 161 (335)
Q Consensus 94 lavp~~-----------~~~~vl~~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~~~~~v~~HPmaG~~~~~-~~~~g 161 (335)
+|||.. .+.++++.+. + ++++++|++.+++.....+.+.+.++.. .+...|.+..+... ..+..
T Consensus 79 iavpt~~~~~~~~~dl~~v~~v~~~i~-~-l~~~~iVV~~ST~~~g~~~~l~~~~~~~--~v~~~Pe~~~~G~a~~~~~~ 154 (402)
T 1dlj_A 79 IATPTNYNSRINYFDTQHVETVIKEVL-S-VNSHATLIIKSTIPIGFITEMRQKFQTD--RIIFSPEFLRESKALYDNLY 154 (402)
T ss_dssp ECCCCCEETTTTEECCHHHHHHHHHHH-H-HCSSCEEEECSCCCTTHHHHHHHHTTCS--CEEECCCCCCTTSTTHHHHS
T ss_pred EecCCCcccCCCCccHHHHHHHHHHHH-h-hCCCCEEEEeCCCCccHHHHHHHHhCCC--eEEECCccccCcchhhcccC
Confidence 999987 5888998885 6 8899999997777777778888777654 45556765443211 00111
Q ss_pred CcceecccccCCCh----hHHHHHHHHHHHHHhcCCE---EEEeChHHHHHHHHHhhhhHH
Q 044593 162 LPFMYDKVRIGNDE----ERIKRVDKFLDVFAKEGCR---MVEMSCFDHDKYAAGSQFVTH 215 (335)
Q Consensus 162 ~~~i~~~~~~~~~~----~~~~~~~~v~~l~~~~G~~---v~~~~~~eHD~~~A~~s~lph 215 (335)
.+.++ ++.+. ...+.++.+.+++...+.+ ++.++.-....++.++.+...
T Consensus 155 ~~riv----iG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~di~~ae~~Kl~~N~~~ 211 (402)
T 1dlj_A 155 PSRII----VSCEENDSPKVKADAEKFALLLKSAAKKNNVPVLIMGASEAEAVKLFANTYL 211 (402)
T ss_dssp CSCEE----EECCTTSCHHHHHHHHHHHHHHHHHCSCSCCCEEEECHHHHHHHHHHHHHHH
T ss_pred CCEEE----EeCCCcccchhHHHHHHHHHHHhhhhccCCceEEecChHHHHHHHHHHHHHH
Confidence 11122 23332 1224567788888764432 344444556667776655543
No 72
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=99.53 E-value=2.4e-14 Score=126.12 Aligned_cols=166 Identities=14% Similarity=0.156 Sum_probs=115.0
Q ss_pred CeEEEEc-ccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHh-CC-------CceecChhhHhhcCCCEEEEecCchhHH
Q 044593 32 LKIAVIG-FGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQ-LN-------APFFADLNDLCELHPDVVLLSTSILSTQ 102 (335)
Q Consensus 32 ~kI~IIG-~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~-~g-------~~~~~~~~~~~~~~aDvVIlavp~~~~~ 102 (335)
|||+||| +|.||+.++..|.+.|++|+++||+++..+...+ .+ +. ..++.+++ +++|+||+|+|...+.
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~D~Vi~~~~~~~~~ 78 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASIT-GMKNEDAA-EACDIAVLTIPWEHAI 78 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEE-EEEHHHHH-HHCSEEEECSCHHHHH
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCCCC-hhhHHHHH-hcCCEEEEeCChhhHH
Confidence 6899999 9999999999999999999999999765543322 22 22 34566666 7899999999999988
Q ss_pred HHHhhccccccCCccEEEEcCCCCc------------hHHHHHHhhCCCCCceEecc-ccCCCCCcccccCCCcceeccc
Q 044593 103 SVLKSIPFQRLKRSTLFVDVLSVKE------------FPRNLFLKYLPQDFDILCTH-PMFGPESAKSSWENLPFMYDKV 169 (335)
Q Consensus 103 ~vl~~l~~~~l~~~~iVvd~~SvK~------------~~~~~l~~~l~~~~~~v~~H-PmaG~~~~~~~~~g~~~i~~~~ 169 (335)
+++.++. +.+ ++++|+|+++.-. ...+.+.+.++. .+++.+| |+.+.........+...+++
T Consensus 79 ~~~~~l~-~~~-~~~~vi~~~~g~~~~~~~~~~~~g~~~~~~l~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~-- 153 (212)
T 1jay_A 79 DTARDLK-NIL-REKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLES-EKVVSALHTIPAARFANLDEKFDWDVPV-- 153 (212)
T ss_dssp HHHHHTH-HHH-TTSEEEECCCCEECCTTCCEECCSSCHHHHHHHHHTC-SCEEECCTTCCHHHHHCTTCCCCEEEEE--
T ss_pred HHHHHHH-HHc-CCCEEEEcCCCcCcCCceeecCCCCcHHHHHHHhCCC-CeEEEEccchHHHHhhCcCCCCCccEEE--
Confidence 9998884 456 4889999986322 225667776663 5677775 55544322100233333332
Q ss_pred ccCCChhHHHHHHHHHHHHHhc-CCEEEEeChHHHHHHHH
Q 044593 170 RIGNDEERIKRVDKFLDVFAKE-GCRMVEMSCFDHDKYAA 208 (335)
Q Consensus 170 ~~~~~~~~~~~~~~v~~l~~~~-G~~v~~~~~~eHD~~~A 208 (335)
+++ +.+.++.+.++|+.+ |.+++++++.....++.
T Consensus 154 --~g~--~~~~~~~v~~l~~~~~G~~~~~~~~~~~a~~~k 189 (212)
T 1jay_A 154 --CGD--DDESKKVVMSLISEIDGLRPLDAGPLSNSRLVE 189 (212)
T ss_dssp --EES--CHHHHHHHHHHHHHSTTEEEEEEESGGGHHHHH
T ss_pred --ECC--cHHHHHHHHHHHHHcCCCCceeccchhHHHHhc
Confidence 222 246778899999999 99888887654433443
No 73
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=99.51 E-value=9.4e-14 Score=143.87 Aligned_cols=157 Identities=13% Similarity=0.043 Sum_probs=113.4
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHh-----------CC-------------CceecChhhH
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQ-----------LN-------------APFFADLNDL 84 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~-----------~g-------------~~~~~~~~~~ 84 (335)
..++||+|||+|.||+.||..|.++|++|++||++++..+.+.+ .| +..+++++ .
T Consensus 310 ~~~~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~~-~ 388 (725)
T 2wtb_A 310 RKIKKVAIIGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDYE-S 388 (725)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEESSSG-G
T ss_pred ccCcEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEeCCHH-H
Confidence 34679999999999999999999999999999999876543321 23 22345664 4
Q ss_pred hhcCCCEEEEecCchh--HHHHHhhccccccCCccEEEEcCCCCchHHHHHHhhCCCCCceEeccccCCCCCcccccCCC
Q 044593 85 CELHPDVVLLSTSILS--TQSVLKSIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQDFDILCTHPMFGPESAKSSWENL 162 (335)
Q Consensus 85 ~~~~aDvVIlavp~~~--~~~vl~~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~~~~~v~~HPmaG~~~~~~~~~g~ 162 (335)
+ .+||+||.|+|.+. ...++.++. +.++++++|++.+|+- ....+.+.+....+|++.|++.++... .
T Consensus 389 ~-~~aDlVIeaVpe~~~vk~~v~~~l~-~~~~~~~IlasntStl--~i~~la~~~~~p~~~iG~hf~~P~~~~------~ 458 (725)
T 2wtb_A 389 F-RDVDMVIEAVIENISLKQQIFADLE-KYCPQHCILASNTSTI--DLNKIGERTKSQDRIVGAHFFSPAHIM------P 458 (725)
T ss_dssp G-TTCSEEEECCCSCHHHHHHHHHHHH-HHSCTTCEEEECCSSS--CHHHHTTTCSCTTTEEEEEECSSTTTC------C
T ss_pred H-CCCCEEEEcCcCCHHHHHHHHHHHH-hhCCCCcEEEeCCCCC--CHHHHHHHhcCCCCEEEecCCCCcccC------c
Confidence 5 79999999999886 457778874 5788999998876653 335566555444579999998744321 1
Q ss_pred cceecccccCCChhHHHHHHHHHHHHHhcCCEEEEeCh
Q 044593 163 PFMYDKVRIGNDEERIKRVDKFLDVFAKEGCRMVEMSC 200 (335)
Q Consensus 163 ~~i~~~~~~~~~~~~~~~~~~v~~l~~~~G~~v~~~~~ 200 (335)
.+.+ +.++.++++.++.+.++++.+|..++++..
T Consensus 459 lvev----v~g~~t~~e~~~~~~~l~~~lGk~~v~v~d 492 (725)
T 2wtb_A 459 LLEI----VRTNHTSAQVIVDLLDVGKKIKKTPVVVGN 492 (725)
T ss_dssp EEEE----EECSSCCHHHHHHHHHHHHHTTCEEEEEES
T ss_pred eEEE----EECCCCCHHHHHHHHHHHHHhCCEEEEECC
Confidence 1111 234444567889999999999999888763
No 74
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=99.49 E-value=9.7e-13 Score=123.09 Aligned_cols=169 Identities=11% Similarity=0.151 Sum_probs=112.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCce--------------ecChhhHhhcCCCEEEEec
Q 044593 31 SLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPF--------------FADLNDLCELHPDVVLLST 96 (335)
Q Consensus 31 ~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~--------------~~~~~~~~~~~aDvVIlav 96 (335)
.|||+|||+|.||+++|..|.++|++|++|+|++ .+..++.|+.. +++.++ + ..+|+||+||
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~--~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~-~-~~~D~vilav 77 (312)
T 3hn2_A 2 SLRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD--YEAIAGNGLKVFSINGDFTLPHVKGYRAPEE-I-GPMDLVLVGL 77 (312)
T ss_dssp --CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT--HHHHHHTCEEEEETTCCEEESCCCEESCHHH-H-CCCSEEEECC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc--HHHHHhCCCEEEcCCCeEEEeeceeecCHHH-c-CCCCEEEEec
Confidence 4799999999999999999999999999999986 35455555421 234444 4 6899999999
Q ss_pred CchhHHHHHhhccccccCCccEEEEcCCCCchHHHHHHhhCCCCCceEeccccCCCCCc-cccc--CCC-cceecccccC
Q 044593 97 SILSTQSVLKSIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQDFDILCTHPMFGPESA-KSSW--ENL-PFMYDKVRIG 172 (335)
Q Consensus 97 p~~~~~~vl~~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~~~~~v~~HPmaG~~~~-~~~~--~g~-~~i~~~~~~~ 172 (335)
|...+.++++++. +.++++++|+.+...-. ..+.+.+.++.. +++++.+..+.... +... .+. .+.+. .
T Consensus 78 k~~~~~~~l~~l~-~~l~~~~~iv~l~nGi~-~~~~l~~~~~~~-~v~~~~~~~~a~~~~p~~v~~~~~g~~~ig----~ 150 (312)
T 3hn2_A 78 KTFANSRYEELIR-PLVEEGTQILTLQNGLG-NEEALATLFGAE-RIIGGVAFLCSNRGEPGEVHHLGAGRIILG----E 150 (312)
T ss_dssp CGGGGGGHHHHHG-GGCCTTCEEEECCSSSS-HHHHHHHHTCGG-GEEEEEEEEECCBCSSSEEEECEEEEEEEE----E
T ss_pred CCCCcHHHHHHHH-hhcCCCCEEEEecCCCC-cHHHHHHHCCCC-cEEEEEEEeeeEEcCCcEEEECCCCeEEEe----c
Confidence 9999999999995 78889999888754422 346677777743 44444332222221 1000 111 11111 0
Q ss_pred CChhHHHHHHHHHHHHHhcCCEEEEeChHHHHHHHHHh
Q 044593 173 NDEERIKRVDKFLDVFAKEGCRMVEMSCFDHDKYAAGS 210 (335)
Q Consensus 173 ~~~~~~~~~~~v~~l~~~~G~~v~~~~~~eHD~~~A~~ 210 (335)
.+....+..+.+.++|+..|.+++..+.-....+-.++
T Consensus 151 ~~~~~~~~~~~l~~~l~~~g~~~~~~~di~~~~w~Kl~ 188 (312)
T 3hn2_A 151 FLPRDTGRIEELAAMFRQAGVDCRTTDDLKRARWEKLV 188 (312)
T ss_dssp SSCCCSHHHHHHHHHHHHTTCCEEECSCHHHHHHHHHH
T ss_pred CCCCccHHHHHHHHHHHhCCCCcEEChHHHHHHHHHHH
Confidence 11112346788899999999998877766666655543
No 75
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=99.48 E-value=7.7e-13 Score=124.99 Aligned_cols=171 Identities=15% Similarity=0.160 Sum_probs=114.9
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCce-------------ecChhhHhhcCCCEEEEe
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPF-------------FADLNDLCELHPDVVLLS 95 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~-------------~~~~~~~~~~~aDvVIla 95 (335)
|++|||+|||+|.||+.+|..|.++|++|++|+|+ +..+...+.|+.. +++.++ + .++|+||+|
T Consensus 1 M~~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~-~~~D~Vila 77 (335)
T 3ghy_A 1 MSLTRICIVGAGAVGGYLGARLALAGEAINVLARG-ATLQALQTAGLRLTEDGATHTLPVRATHDAAA-L-GEQDVVIVA 77 (335)
T ss_dssp -CCCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH-HHHHHHHHTCEEEEETTEEEEECCEEESCHHH-H-CCCSEEEEC
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh-HHHHHHHHCCCEEecCCCeEEEeeeEECCHHH-c-CCCCEEEEe
Confidence 34689999999999999999999999999999996 4455556666532 345555 3 789999999
Q ss_pred cCchhHHHHHhhccccccCCccEEEEcCCCC------------------chHHHHHHhhCCCCCceEeccccCCCCCc-c
Q 044593 96 TSILSTQSVLKSIPFQRLKRSTLFVDVLSVK------------------EFPRNLFLKYLPQDFDILCTHPMFGPESA-K 156 (335)
Q Consensus 96 vp~~~~~~vl~~l~~~~l~~~~iVvd~~SvK------------------~~~~~~l~~~l~~~~~~v~~HPmaG~~~~-~ 156 (335)
||...+.++++++. +.++++++|+.+.+.- ....+.+.+.+|.. +++++....|.... +
T Consensus 78 vk~~~~~~~~~~l~-~~l~~~~~iv~~~nGi~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~-~v~~gv~~~~a~~~~p 155 (335)
T 3ghy_A 78 VKAPALESVAAGIA-PLIGPGTCVVVAMNGVPWWFFDRPGPLQGQRLQAVDPHGRIAQAIPTR-HVLGCVVHLTCATVSP 155 (335)
T ss_dssp CCHHHHHHHHGGGS-SSCCTTCEEEECCSSSCTTTTCSSSTTTTCCCTTTCTTSHHHHHSCGG-GEEEEEECCCEEESST
T ss_pred CCchhHHHHHHHHH-hhCCCCCEEEEECCCCccccccccccccccccccCCcHHHHHHhcCcc-cEEEEEEEEEEEEcCC
Confidence 99999999999995 7889999999875441 01224566667643 44444333332221 1
Q ss_pred ----cccCCCcceecccccCCChhHHHHHHHHHHHHHhcCCEEEEeChHHHHHHHHH
Q 044593 157 ----SSWENLPFMYDKVRIGNDEERIKRVDKFLDVFAKEGCRMVEMSCFDHDKYAAG 209 (335)
Q Consensus 157 ----~~~~g~~~i~~~~~~~~~~~~~~~~~~v~~l~~~~G~~v~~~~~~eHD~~~A~ 209 (335)
....+. +.+.. .+....+..+.+.++|+..|.+++..+.-....+..+
T Consensus 156 g~v~~~~~g~-~~iG~----~~~~~~~~~~~l~~~l~~~g~~~~~~~di~~~~w~Kl 207 (335)
T 3ghy_A 156 GHIRHGNGRR-LILGE----PAGGASPRLASIAALFGRAGLQAECSEAIQRDIWFKL 207 (335)
T ss_dssp TEEEECSCCE-EEEEC----TTCSCCHHHHHHHHHHHHTTCEEEECSCHHHHHHHHH
T ss_pred cEEEECCCCe-EEEec----CCCCcCHHHHHHHHHHHhCCCCcEeCchHHHHHHHHH
Confidence 100111 12210 1111235678889999999999888777676655553
No 76
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=99.48 E-value=1.3e-13 Score=128.46 Aligned_cols=174 Identities=14% Similarity=0.135 Sum_probs=116.7
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHc-----C-CeEEEEcCCCCcHHHHHh-CCCceec-------------ChhhHhhcCC
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARH-----H-HTLLVHSRSDHSPAVRQQ-LNAPFFA-------------DLNDLCELHP 89 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~-----G-~~V~~~dr~~~~~~~a~~-~g~~~~~-------------~~~~~~~~~a 89 (335)
++|||+|||+|.||+.+|..|.++ | ++|++|+| ++..+...+ .|+.... +..+.+ .++
T Consensus 7 ~~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r-~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 84 (317)
T 2qyt_A 7 QPIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR-GAHLEAIRAAGGLRVVTPSRDFLARPTCVTDNPAEV-GTV 84 (317)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC-HHHHHHHHHHTSEEEECSSCEEEECCSEEESCHHHH-CCE
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc-HHHHHHHHhcCCeEEEeCCCCeEEecceEecCcccc-CCC
Confidence 347999999999999999999999 9 99999999 555555555 6764321 223344 789
Q ss_pred CEEEEecCchhHHHHHhhccccccCCccEEEEcCCCCchHHHHHHhhCCCCCceEeccccCCCCCc-c----cccCCCcc
Q 044593 90 DVVLLSTSILSTQSVLKSIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQDFDILCTHPMFGPESA-K----SSWENLPF 164 (335)
Q Consensus 90 DvVIlavp~~~~~~vl~~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~~~~~v~~HPmaG~~~~-~----~~~~g~~~ 164 (335)
|+||+|||...+.++++++. +.++++++|+++...- ...+.+.+.++.. +++.+.|..+.... + ....|...
T Consensus 85 D~vil~vk~~~~~~v~~~i~-~~l~~~~~iv~~~nG~-~~~~~l~~~l~~~-~v~~g~~~~~a~~~~pg~~~~~~~g~~~ 161 (317)
T 2qyt_A 85 DYILFCTKDYDMERGVAEIR-PMIGQNTKILPLLNGA-DIAERMRTYLPDT-VVWKGCVYISARKSAPGLITLEADRELF 161 (317)
T ss_dssp EEEEECCSSSCHHHHHHHHG-GGEEEEEEEEECSCSS-SHHHHHTTTSCTT-TBCEEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred CEEEEecCcccHHHHHHHHH-hhcCCCCEEEEccCCC-CcHHHHHHHCCCC-cEEEEEEEEEEEEcCCCEEEEcCCCceE
Confidence 99999999999999999985 6788889999975442 2336677777643 34444444333321 0 00122221
Q ss_pred eecccccCC-ChhHHHHHHHHHHHHHhcCCEEEEeChHHHHHHHHHhhhh
Q 044593 165 MYDKVRIGN-DEERIKRVDKFLDVFAKEGCRMVEMSCFDHDKYAAGSQFV 213 (335)
Q Consensus 165 i~~~~~~~~-~~~~~~~~~~v~~l~~~~G~~v~~~~~~eHD~~~A~~s~l 213 (335)
++. .. ++...+.+ .+.++|+..|.++++.+.-....+..++...
T Consensus 162 ~ig----~~~~~~~~~~~-~~~~ll~~~g~~~~~~~di~~~~~~Kl~~N~ 206 (317)
T 2qyt_A 162 YFG----SGLPEQTDDEV-RLAELLTAAGIRAYNPTDIDWYIMKKFMMIS 206 (317)
T ss_dssp EEE----CCSSSCCHHHH-HHHHHHHHTTCCEECCSCHHHHHHHHHHHHH
T ss_pred EEc----CCCCCCcCHHH-HHHHHHHHCCCCCEEchHHHHHHHHHHHHHH
Confidence 121 11 22224456 7899999999988887766666666665544
No 77
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=99.48 E-value=6.5e-14 Score=128.70 Aligned_cols=164 Identities=13% Similarity=0.106 Sum_probs=108.8
Q ss_pred CeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhC---CC----c-eecChhhHhhcCCCEEEEecCchhHHH
Q 044593 32 LKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQL---NA----P-FFADLNDLCELHPDVVLLSTSILSTQS 103 (335)
Q Consensus 32 ~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~---g~----~-~~~~~~~~~~~~aDvVIlavp~~~~~~ 103 (335)
|||+|||+|.||+.+|..|.++|++|++|||+++..+..... |. . ..++ .+.+ .++|+||+|+|...+.+
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~-~~~d~vi~~v~~~~~~~ 78 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTAND-PDFL-ATSDLLLVTLKAWQVSD 78 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESC-HHHH-HTCSEEEECSCGGGHHH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCCEEEEEcCccceeeEEEEcCCCceeeeeeeecC-cccc-CCCCEEEEEecHHhHHH
Confidence 689999999999999999999999999999998654322221 21 0 1233 3444 68999999999999999
Q ss_pred HHhhccccccCCccEEEEcCCCCchHHHHHHhhCCCCCceEecccc-----CCCCCcccccCCCcceecccccCCChhHH
Q 044593 104 VLKSIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQDFDILCTHPM-----FGPESAKSSWENLPFMYDKVRIGNDEERI 178 (335)
Q Consensus 104 vl~~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~~~~~v~~HPm-----aG~~~~~~~~~g~~~i~~~~~~~~~~~~~ 178 (335)
+++++. +.++++++|+++.+.- ...+.+.+.++. ++.++++ .|| .......|. ..+.. .+ .+.
T Consensus 79 v~~~l~-~~l~~~~~vv~~~~g~-~~~~~l~~~~~~---~~~g~~~~~~~~~~p-~~~~~~~g~-~~i~~----~~-~~~ 146 (291)
T 1ks9_A 79 AVKSLA-STLPVTTPILLIHNGM-GTIEELQNIQQP---LLMGTTTHAARRDGN-VIIHVANGI-THIGP----AR-QQD 146 (291)
T ss_dssp HHHHHH-TTSCTTSCEEEECSSS-CTTGGGTTCCSC---EEEEEECCEEEEETT-EEEEEECCC-EEEEE----SS-GGG
T ss_pred HHHHHH-hhCCCCCEEEEecCCC-CcHHHHHHhcCC---eEEEEEeEccEEcCC-EEEEecccc-eEEcc----CC-CCc
Confidence 999985 6788899999875432 222345555543 5545553 344 211222443 23321 11 123
Q ss_pred HHHHHHHHHHHhcCCEEEEeChHHHHHHHHH
Q 044593 179 KRVDKFLDVFAKEGCRMVEMSCFDHDKYAAG 209 (335)
Q Consensus 179 ~~~~~v~~l~~~~G~~v~~~~~~eHD~~~A~ 209 (335)
+..+.++++|+..|.++++.+.-....+..+
T Consensus 147 ~~~~~~~~ll~~~g~~~~~~~~~~~~~~~Kl 177 (291)
T 1ks9_A 147 GDYSYLADILQTVLPDVAWHNNIRAELWRKL 177 (291)
T ss_dssp TTCTHHHHHHHTTSSCEEECTTHHHHHHHHH
T ss_pred chHHHHHHHHHhcCCCCeecHHHHHHHHHHH
Confidence 4567888999999998888876555554443
No 78
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=99.48 E-value=6.3e-13 Score=125.48 Aligned_cols=154 Identities=12% Similarity=0.228 Sum_probs=104.0
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCC-----------CceecChhhHhhcCCCEEEEecCc
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLN-----------APFFADLNDLCELHPDVVLLSTSI 98 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g-----------~~~~~~~~~~~~~~aDvVIlavp~ 98 (335)
..|||+|||+|.||+.+|..|.++|++|++|+|+++..+...+.| +..++++.+ + .++|+||+|||.
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~-~-~~aDvVil~vk~ 90 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGEEVILWARRKEIVDLINVSHTSPYVEESKITVRATNDLEE-I-KKEDILVIAIPV 90 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHSCBTTBTTCCCCSEEESCGGG-C-CTTEEEEECSCG
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCCcccCCCCeeeEEEeCCHHH-h-cCCCEEEEECCH
Confidence 468999999999999999999999999999999987665455444 345567777 6 789999999999
Q ss_pred hhHHHHHhhccccccCCccEEEEcC-CCCc----hHHHHHHhhCCCCCceEeccccCCCCCcccccCCCcceecccccCC
Q 044593 99 LSTQSVLKSIPFQRLKRSTLFVDVL-SVKE----FPRNLFLKYLPQDFDILCTHPMFGPESAKSSWENLPFMYDKVRIGN 173 (335)
Q Consensus 99 ~~~~~vl~~l~~~~l~~~~iVvd~~-SvK~----~~~~~l~~~l~~~~~~v~~HPmaG~~~~~~~~~g~~~i~~~~~~~~ 173 (335)
..+.+++.++. + ++++|++++ ++.. .+.+.+.+.++ ....+.. ||........|.+..+. +++
T Consensus 91 ~~~~~v~~~l~-~---~~~~vv~~~nGi~~~~~~~l~~~~~~~~~-~~~~~~~----~P~~~~~~~~g~~~~~~---~g~ 158 (335)
T 1z82_A 91 QYIREHLLRLP-V---KPSMVLNLSKGIEIKTGKRVSEIVEEILG-CPYAVLS----GPSHAEEVAKKLPTAVT---LAG 158 (335)
T ss_dssp GGHHHHHTTCS-S---CCSEEEECCCCCCTTTCCCHHHHHHHHTC-CCEEEEE----SSCCHHHHHTTCCEEEE---EEE
T ss_pred HHHHHHHHHhC-c---CCCEEEEEeCCCCCCccCcHHHHHHHHcC-CceEEEE----CCccHHHHhCCCceEEE---EEe
Confidence 99999999885 3 788999987 3322 23344444443 1112222 33322111234433322 122
Q ss_pred ChhHHHHHHHHHHHHHhcCCEEEEeChHH
Q 044593 174 DEERIKRVDKFLDVFAKEGCRMVEMSCFD 202 (335)
Q Consensus 174 ~~~~~~~~~~v~~l~~~~G~~v~~~~~~e 202 (335)
+ + .+.++++|+..|.+++..+.-.
T Consensus 159 ~--~---~~~~~~ll~~~g~~~~~~~di~ 182 (335)
T 1z82_A 159 E--N---SKELQKRISTEYFRVYTCEDVV 182 (335)
T ss_dssp T--T---HHHHHHHHCCSSEEEEEESCHH
T ss_pred h--h---HHHHHHHhCCCCEEEEecCchH
Confidence 2 1 5778899999998877766443
No 79
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=99.47 E-value=5e-13 Score=132.24 Aligned_cols=174 Identities=14% Similarity=0.145 Sum_probs=112.4
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhC-------C-------------CceecChhhHhhcCC
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQL-------N-------------APFFADLNDLCELHP 89 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~-------g-------------~~~~~~~~~~~~~~a 89 (335)
..|||+|||+|.||..+|..|+++|++|++||++++..+...+. | +..++++.+.+ .+|
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~-~~a 85 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAV-AHG 85 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHH-HHC
T ss_pred CCceEEEECcCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHh-hcC
Confidence 46899999999999999999999999999999998777655443 2 23455666666 789
Q ss_pred CEEEEecCc----------hhHHHHHhhccccccCCccEEEEcCCCCchHHHHHHhhCC----CC---Cc-eEeccccCC
Q 044593 90 DVVLLSTSI----------LSTQSVLKSIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLP----QD---FD-ILCTHPMFG 151 (335)
Q Consensus 90 DvVIlavp~----------~~~~~vl~~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~----~~---~~-~v~~HPmaG 151 (335)
|+||+|||. ..+.++++++. +.++++++|++.+++.....+.+.+.+. .+ .. .+ .++
T Consensus 86 DvviiaVptp~~~~~~~dl~~v~~v~~~i~-~~l~~~~iVV~~STv~~gt~~~l~~~l~~~~~~g~~~~~~~v----~~~ 160 (478)
T 2y0c_A 86 DVQFIAVGTPPDEDGSADLQYVLAAARNIG-RYMTGFKVIVDKSTVPVGTAERVRAAVAEELAKRGGDQMFSV----VSN 160 (478)
T ss_dssp SEEEECCCCCBCTTSSBCCHHHHHHHHHHH-HHCCSCEEEEECSCCCTTHHHHHHHHHHHHHHHTTCCCCEEE----EEC
T ss_pred CEEEEEeCCCcccCCCccHHHHHHHHHHHH-HhcCCCCEEEEeCCcCCCchHHHHHHHHHHhcCCCCCccEEE----EEC
Confidence 999999998 67899999885 6789999999988764433333332221 11 12 22 334
Q ss_pred CCCcccccC----CCc-ceecccccCCChh--HHHHHHHHHHHHHhcCC--EEEEeChHHHHHHHHHhhhh
Q 044593 152 PESAKSSWE----NLP-FMYDKVRIGNDEE--RIKRVDKFLDVFAKEGC--RMVEMSCFDHDKYAAGSQFV 213 (335)
Q Consensus 152 ~~~~~~~~~----g~~-~i~~~~~~~~~~~--~~~~~~~v~~l~~~~G~--~v~~~~~~eHD~~~A~~s~l 213 (335)
|+...++-. +.+ .++ ++.+.. ..+..+.++++++.++. .++.++.-.-..++.++.+.
T Consensus 161 Pe~~~eG~~~~~~~~p~~iv----iG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~di~~ae~~Kl~~N~ 227 (478)
T 2y0c_A 161 PEFLKEGAAVDDFTRPDRIV----IGCDDDVPGERARELMKKLYAPFNRNHERTLYMDVRSAEFTKYAANA 227 (478)
T ss_dssp CCCCCTTCHHHHHHSCSCEE----EECCSSHHHHHHHHHHHHHTGGGGSSSCCEEEECHHHHHHHHHHHHH
T ss_pred hhhhcccceeeccCCCCEEE----EEECCCcccHHHHHHHHHHHHHHhccCCeEEcCCHHHHHHHHHHHHH
Confidence 444321111 111 122 233211 11567888899988763 35555444445566665544
No 80
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=99.46 E-value=1.1e-12 Score=123.16 Aligned_cols=165 Identities=17% Similarity=0.203 Sum_probs=113.3
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCc-------------eecChhhHhhcCCCEEEEec
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAP-------------FFADLNDLCELHPDVVLLST 96 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~-------------~~~~~~~~~~~~aDvVIlav 96 (335)
..|||+|||+|.||+.+|..|.++|++|++| ++++..+...+.|+. .+++.++ + .++|+||+||
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~-~-~~~D~vilav 94 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSASSDPSA-V-QGADLVLFCV 94 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEEESCGGG-G-TTCSEEEECC
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCHHH-c-CCCCEEEEEc
Confidence 4689999999999999999999999999999 877666655554432 2345544 4 6899999999
Q ss_pred CchhHHHHHhhccccccCCccEEEEcCCCCchHHHHHHhhCCCCCceEeccc-----cCCCCCcccccCCCcceeccccc
Q 044593 97 SILSTQSVLKSIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQDFDILCTHP-----MFGPESAKSSWENLPFMYDKVRI 171 (335)
Q Consensus 97 p~~~~~~vl~~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~~~~~v~~HP-----maG~~~~~~~~~g~~~i~~~~~~ 171 (335)
|...+.++++++. +.++++++|+.+.+.-. ..+.+.+.++ .+++++.. +.||........|.+. +
T Consensus 95 k~~~~~~~l~~l~-~~l~~~~~iv~~~nGi~-~~~~l~~~~~--~~vl~g~~~~~a~~~gP~~~~~~~~g~~~------i 164 (318)
T 3hwr_A 95 KSTDTQSAALAMK-PALAKSALVLSLQNGVE-NADTLRSLLE--QEVAAAVVYVATEMAGPGHVRHHGRGELV------I 164 (318)
T ss_dssp CGGGHHHHHHHHT-TTSCTTCEEEEECSSSS-HHHHHHHHCC--SEEEEEEEEEEEEEEETTEEEEEEEEEEE------E
T ss_pred ccccHHHHHHHHH-HhcCCCCEEEEeCCCCC-cHHHHHHHcC--CcEEEEEEEEeEEEcCCeEEEEcCCceEE------E
Confidence 9999999999995 68889999888754432 3367777776 23444322 2234332111123221 2
Q ss_pred CCChhHHHHHHHHHHHHHhcCCEEEEeChHHHHHHHHHhh
Q 044593 172 GNDEERIKRVDKFLDVFAKEGCRMVEMSCFDHDKYAAGSQ 211 (335)
Q Consensus 172 ~~~~~~~~~~~~v~~l~~~~G~~v~~~~~~eHD~~~A~~s 211 (335)
+.+ +..+.++++|...|.+++..+.-....+..++.
T Consensus 165 g~~----~~~~~l~~~l~~~~~~~~~~~Di~~~~w~Kl~~ 200 (318)
T 3hwr_A 165 EPT----SHGANLAAIFAAAGVPVETSDNVRGALWAKLIL 200 (318)
T ss_dssp CCC----TTTHHHHHHHHHTTCCEEECSCHHHHHHHHHHH
T ss_pred cCC----HHHHHHHHHHHhCCCCcEechHHHHHHHHHHHH
Confidence 332 234678899999999988877666666655543
No 81
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=99.17 E-value=7.1e-15 Score=129.39 Aligned_cols=164 Identities=13% Similarity=0.191 Sum_probs=112.3
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCchhHHHHHhhc
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILSTQSVLKSI 108 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~~~~vl~~l 108 (335)
.+.|||+|||+|.||+.++..|.+.|++|++|||+++ .+.....|+... +..+++ .++|+||+|+|...+..++ ++
T Consensus 17 ~~~~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~g~~~~-~~~~~~-~~aDvVilav~~~~~~~v~-~l 92 (201)
T 2yjz_A 17 EKQGVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNPQ-VSSLLPRGAEVL-CYSEAA-SRSDVIVLAVHREHYDFLA-EL 92 (201)
Confidence 3568999999999999999999999999999999976 333334465544 566666 7899999999998887777 45
Q ss_pred cccccCCccEEEEcCCCCc------hHHHHHHhhCCCCCceEeccccCCCCCcccc-cCCCc-ceecccccCCChhHHHH
Q 044593 109 PFQRLKRSTLFVDVLSVKE------FPRNLFLKYLPQDFDILCTHPMFGPESAKSS-WENLP-FMYDKVRIGNDEERIKR 180 (335)
Q Consensus 109 ~~~~l~~~~iVvd~~SvK~------~~~~~l~~~l~~~~~~v~~HPmaG~~~~~~~-~~g~~-~i~~~~~~~~~~~~~~~ 180 (335)
. + +.++++|+|+++... ...+.+++.++. .+++.+.|..+......+ ..+.. .++ ++. +.+.
T Consensus 93 ~-~-~~~~~ivI~~~~G~~~~~~~~~~~~~l~~~~~~-~~vvra~~n~~a~~~~~g~l~g~~~~~~----~g~---~~~~ 162 (201)
T 2yjz_A 93 A-D-SLKGRVLIDVSNNQKMNQYPESNAEYLAQLVPG-AHVVKAFNTISAWALQSGTLDASRQVFV----CGN---DSKA 162 (201)
Confidence 3 2 457889999976542 113455555553 356666666665543211 11211 222 222 2456
Q ss_pred HHHHHHHHHhcCCEEEEeChHHHHHH
Q 044593 181 VDKFLDVFAKEGCRMVEMSCFDHDKY 206 (335)
Q Consensus 181 ~~~v~~l~~~~G~~v~~~~~~eHD~~ 206 (335)
.+.++++|+.+|.+++.+.+-...+.
T Consensus 163 ~~~v~~ll~~~G~~~~~~G~l~~a~~ 188 (201)
T 2yjz_A 163 KDRVMDIARTLGLTPLDQGSLVAAKE 188 (201)
Confidence 78899999999999988876544433
No 82
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=99.44 E-value=1.3e-12 Score=128.81 Aligned_cols=178 Identities=13% Similarity=0.024 Sum_probs=117.1
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHc-CC-eEEEEcCCCC----cHHHHHh---------------------CC-CceecC
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARH-HH-TLLVHSRSDH----SPAVRQQ---------------------LN-APFFAD 80 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~-G~-~V~~~dr~~~----~~~~a~~---------------------~g-~~~~~~ 80 (335)
+..|||+|||+|.||..+|..|+++ |+ +|++||++++ ..+...+ .| +..+++
T Consensus 16 ~~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~ttd 95 (478)
T 3g79_A 16 GPIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFECTPD 95 (478)
T ss_dssp CSCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEEESC
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEEeCc
Confidence 4678999999999999999999999 99 9999999998 6553332 12 233455
Q ss_pred hhhHhhcCCCEEEEecCchh------------HHHHHhhccccccCCccEEEEcCCCCchHHHHHH-----hhCCC--CC
Q 044593 81 LNDLCELHPDVVLLSTSILS------------TQSVLKSIPFQRLKRSTLFVDVLSVKEFPRNLFL-----KYLPQ--DF 141 (335)
Q Consensus 81 ~~~~~~~~aDvVIlavp~~~------------~~~vl~~l~~~~l~~~~iVvd~~SvK~~~~~~l~-----~~l~~--~~ 141 (335)
.+.+ .+||+||+|||... +..+.+.+. +.++++++|++.+++.....+.+. +..+. +.
T Consensus 96 -~ea~-~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~-~~l~~g~iVV~~STv~pgtt~~v~~~ile~~~g~~~~~ 172 (478)
T 3g79_A 96 -FSRI-SELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVG-KYLKPGMLVVLESTITPGTTEGMAKQILEEESGLKAGE 172 (478)
T ss_dssp -GGGG-GGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHH-HHCCTTCEEEECSCCCTTTTTTHHHHHHHHHHCCCBTT
T ss_pred -HHHH-hcCCEEEEecCCchhccCCccccHHHHHHHHHHHH-hhcCCCcEEEEeCCCChHHHHHHHHHHHHHhcCCCcCC
Confidence 4555 78999999998763 566677775 678899999999877543332222 22221 11
Q ss_pred -ceEeccccCCCCCcc-cccCCCcceecccccCCChhHHHHHHHHHHHHHhc-CCEEEEeChHHHHHHHHHhhhhHHH
Q 044593 142 -DILCTHPMFGPESAK-SSWENLPFMYDKVRIGNDEERIKRVDKFLDVFAKE-GCRMVEMSCFDHDKYAAGSQFVTHT 216 (335)
Q Consensus 142 -~~v~~HPmaG~~~~~-~~~~g~~~i~~~~~~~~~~~~~~~~~~v~~l~~~~-G~~v~~~~~~eHD~~~A~~s~lph~ 216 (335)
..+...|.++.+... ..+...+.++ .+.+ .+..+.++++++.+ +.+++.++...-.+++.++.+.-..
T Consensus 173 d~~v~~~Pe~~~~G~a~~~~~~~~~Iv----~G~~---~~~~~~~~~ly~~~~~~~~~~~~~~~~aE~~Kl~~N~~~a 243 (478)
T 3g79_A 173 DFALAHAPERVMVGRLLKNIREHDRIV----GGID---EASTKRAVELYSPVLTVGQVIPMSATAAEVTKTAENTFRD 243 (478)
T ss_dssp TBEEEECCCCCCTTSHHHHHHHSCEEE----EESS---HHHHHHHHHHHGGGCSSCCEEEEEHHHHHHHHHHHHHHHH
T ss_pred ceeEEeCCccCCccchhhhhcCCcEEE----EeCC---HHHHHHHHHHHhhhccCCeEEeCCHHHHHHHHHHHHHHHH
Confidence 134445666544321 0000111222 2333 34568899999999 7777777666667777776655443
No 83
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=99.43 E-value=3.8e-12 Score=119.43 Aligned_cols=172 Identities=19% Similarity=0.261 Sum_probs=113.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCC---------------ceecChhhHhhcCCCEEEEe
Q 044593 31 SLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNA---------------PFFADLNDLCELHPDVVLLS 95 (335)
Q Consensus 31 ~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~---------------~~~~~~~~~~~~~aDvVIla 95 (335)
.|||+|||+|.||+++|..|.++|++|++|+|++. +..++.|+ ..+++.+++. ..+|+||+|
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~~--~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~-~~~DlVila 78 (320)
T 3i83_A 2 SLNILVIGTGAIGSFYGALLAKTGHCVSVVSRSDY--ETVKAKGIRIRSATLGDYTFRPAAVVRSAAELE-TKPDCTLLC 78 (320)
T ss_dssp -CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTTH--HHHHHHCEEEEETTTCCEEECCSCEESCGGGCS-SCCSEEEEC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEeCChH--HHHHhCCcEEeecCCCcEEEeeeeeECCHHHcC-CCCCEEEEe
Confidence 47999999999999999999999999999999872 43444343 1234555554 489999999
Q ss_pred cCchhHHHHHhhccccccCCccEEEEcCCCCchHHHHHHhhCCCCCceEeccccCCCCCc-c-cccCCCcceecccccCC
Q 044593 96 TSILSTQSVLKSIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQDFDILCTHPMFGPESA-K-SSWENLPFMYDKVRIGN 173 (335)
Q Consensus 96 vp~~~~~~vl~~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~~~~~v~~HPmaG~~~~-~-~~~~g~~~i~~~~~~~~ 173 (335)
||...+.++++++. +.++++++|+.+...-. ..+.+.+.++.. .++++-..+|.... + ......+.. .+++.
T Consensus 79 vK~~~~~~~l~~l~-~~l~~~t~Iv~~~nGi~-~~~~l~~~~~~~-~vl~g~~~~~a~~~~pg~v~~~~~~~---~~ig~ 152 (320)
T 3i83_A 79 IKVVEGADRVGLLR-DAVAPDTGIVLISNGID-IEPEVAAAFPDN-EVISGLAFIGVTRTAPGEIWHQAYGR---LMLGN 152 (320)
T ss_dssp CCCCTTCCHHHHHT-TSCCTTCEEEEECSSSS-CSHHHHHHSTTS-CEEEEEEEEEEEEEETTEEEEEEEEE---EEEEE
T ss_pred cCCCChHHHHHHHH-hhcCCCCEEEEeCCCCC-hHHHHHHHCCCC-cEEEEEEEeceEEcCCCEEEECCCCE---EEEec
Confidence 99999999999995 67888888887654322 126677777753 45554434432221 0 100110100 01211
Q ss_pred -ChhHHHHHHHHHHHHHhcCCEEEEeChHHHHHHHHHhh
Q 044593 174 -DEERIKRVDKFLDVFAKEGCRMVEMSCFDHDKYAAGSQ 211 (335)
Q Consensus 174 -~~~~~~~~~~v~~l~~~~G~~v~~~~~~eHD~~~A~~s 211 (335)
+....+..+.+.++|+..|.+++..+.-....+-.++-
T Consensus 153 ~~~~~~~~~~~l~~~l~~~~~~~~~~~di~~~~w~Kl~~ 191 (320)
T 3i83_A 153 YPGGVSERVKTLAAAFEEAGIDGIATENITTARWQKCVW 191 (320)
T ss_dssp SSSCCCHHHHHHHHHHHHTTSCEEECSCHHHHHHHHHHH
T ss_pred CCCCccHHHHHHHHHHHhCCCCceECHHHHHHHHHHHHH
Confidence 11123467888999999999988887666666555433
No 84
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=99.36 E-value=1e-12 Score=123.22 Aligned_cols=138 Identities=15% Similarity=0.239 Sum_probs=99.5
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCchh-HHHHHh
Q 044593 28 KSTSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILS-TQSVLK 106 (335)
Q Consensus 28 ~~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~-~~~vl~ 106 (335)
...+++|||||+|.||+++|+.++..|++|++||++++... +.+.|+.. .++++++ .++|+|++++|... +..++.
T Consensus 139 ~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~-~~~~g~~~-~~l~ell-~~aDvVvl~~P~~~~t~~li~ 215 (313)
T 2ekl_A 139 ELAGKTIGIVGFGRIGTKVGIIANAMGMKVLAYDILDIREK-AEKINAKA-VSLEELL-KNSDVISLHVTVSKDAKPIID 215 (313)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSCCHHH-HHHTTCEE-CCHHHHH-HHCSEEEECCCCCTTSCCSBC
T ss_pred CCCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCcchhH-HHhcCcee-cCHHHHH-hhCCEEEEeccCChHHHHhhC
Confidence 45688999999999999999999999999999999987653 66778764 4778887 78999999999754 433332
Q ss_pred -hccccccCCccEEEEcCCCCchHHHHHHhhCCCC------CceEeccccCCCCCcccccCCCcceecccc
Q 044593 107 -SIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQD------FDILCTHPMFGPESAKSSWENLPFMYDKVR 170 (335)
Q Consensus 107 -~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~~------~~~v~~HPmaG~~~~~~~~~g~~~i~~~~~ 170 (335)
.. ...++++++++|+++......+.+.+.+..+ ..++..||+.... ....|...+++++|..
T Consensus 216 ~~~-l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~eP~~~~~-~~~L~~~~nviltPH~ 284 (313)
T 2ekl_A 216 YPQ-FELMKDNVIIVNTSRAVAVNGKALLDYIKKGKVYAYATDVFWNEPPKEEW-ELELLKHERVIVTTHI 284 (313)
T ss_dssp HHH-HHHSCTTEEEEESSCGGGBCHHHHHHHHHTTCEEEEEESCCSSSSCCSHH-HHHHHHSTTEEECCSC
T ss_pred HHH-HhcCCCCCEEEECCCCcccCHHHHHHHHHcCCCcEEEEecCCCCCCCCcc-cchHhhCCCEEECCcc
Confidence 22 1357899999999886544434555544332 3577889987210 0135666677887754
No 85
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=99.36 E-value=3.1e-12 Score=121.14 Aligned_cols=125 Identities=16% Similarity=0.149 Sum_probs=90.0
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhC-CC--------------ceecChhhHhhcCCCEEE
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQL-NA--------------PFFADLNDLCELHPDVVL 93 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~-g~--------------~~~~~~~~~~~~~aDvVI 93 (335)
|+.|||+|||+|.||+.+|..|.+.|++|++|||+++..+...+. ++ ..++++.+++ .++|+||
T Consensus 2 m~~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~D~vi 80 (359)
T 1bg6_A 2 IESKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAV-KDADVIL 80 (359)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHH-TTCSEEE
T ss_pred CCcCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHH-hcCCEEE
Confidence 345899999999999999999999999999999998766544443 32 2345676766 7899999
Q ss_pred EecCchhHHHHHhhccccccCCccEEEEcCC-CCchH--HHHHHhhCCCCCce--EeccccCCCCCc
Q 044593 94 LSTSILSTQSVLKSIPFQRLKRSTLFVDVLS-VKEFP--RNLFLKYLPQDFDI--LCTHPMFGPESA 155 (335)
Q Consensus 94 lavp~~~~~~vl~~l~~~~l~~~~iVvd~~S-vK~~~--~~~l~~~l~~~~~~--v~~HPmaG~~~~ 155 (335)
+|+|.....++++++. +.++++++|+++.+ .+... .+.+.+..+..+.| ++.||+++...+
T Consensus 81 ~~v~~~~~~~~~~~l~-~~l~~~~~vv~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~g 146 (359)
T 1bg6_A 81 IVVPAIHHASIAANIA-SYISEGQLIILNPGATGGALEFRKILRENGAPEVTIGETSSMLFTCRSER 146 (359)
T ss_dssp ECSCGGGHHHHHHHHG-GGCCTTCEEEESSCCSSHHHHHHHHHHHTTCCCCEEEEESSCSEEEECSS
T ss_pred EeCCchHHHHHHHHHH-HhCCCCCEEEEcCCCchHHHHHHHHHHhcCCCCeEEEEecCCcEEEEeCC
Confidence 9999999999999885 67889999998855 43321 12233321122335 357898875443
No 86
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=99.35 E-value=3.4e-12 Score=121.34 Aligned_cols=141 Identities=18% Similarity=0.268 Sum_probs=100.5
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCch-hHHHHHh
Q 044593 28 KSTSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSIL-STQSVLK 106 (335)
Q Consensus 28 ~~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~-~~~~vl~ 106 (335)
...+++|||||+|.||+.+|+.++..|++|++|||++...+.+.+.|+....++++++ ++||+|++++|.. .+..++.
T Consensus 161 ~l~gktvGIIG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell-~~aDvV~l~~Plt~~t~~li~ 239 (351)
T 3jtm_A 161 DLEGKTIGTVGAGRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKETGAKFVEDLNEML-PKCDVIVINMPLTEKTRGMFN 239 (351)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHGGGCCEEEEECSSCCCHHHHHHHCCEECSCHHHHG-GGCSEEEECSCCCTTTTTCBS
T ss_pred cccCCEEeEEEeCHHHHHHHHHHHHCCCEEEEeCCCccCHHHHHhCCCeEcCCHHHHH-hcCCEEEECCCCCHHHHHhhc
Confidence 4578999999999999999999999999999999998766667777887777899988 8999999999964 3444432
Q ss_pred -hccccccCCccEEEEcCCCCchHHHHHHhhCCCCCceEeccccCCCCCcc---cccCCCcceecccc
Q 044593 107 -SIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQDFDILCTHPMFGPESAK---SSWENLPFMYDKVR 170 (335)
Q Consensus 107 -~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~~~~~v~~HPmaG~~~~~---~~~~g~~~i~~~~~ 170 (335)
+. ...++++++++|++..+....+.+.+.+..+.-.-.+..++.+|..+ ..|.-..++++|.+
T Consensus 240 ~~~-l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ga~lDV~~~EP~~~~~pL~~~~nvilTPHi 306 (351)
T 3jtm_A 240 KEL-IGKLKKGVLIVNNARGAIMERQAVVDAVESGHIGGYSGDVWDPQPAPKDHPWRYMPNQAMTPHT 306 (351)
T ss_dssp HHH-HHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTCGGGTSTTBCCCCSC
T ss_pred HHH-HhcCCCCCEEEECcCchhhCHHHHHHHHHhCCccEEEeCCCCCCCCCCCChhhcCCCEEECCcC
Confidence 22 24578999999998776555566655554332222345666655421 23333345666653
No 87
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=99.35 E-value=2.5e-12 Score=120.25 Aligned_cols=136 Identities=18% Similarity=0.265 Sum_probs=97.5
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCchh-HHHHHh
Q 044593 28 KSTSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILS-TQSVLK 106 (335)
Q Consensus 28 ~~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~-~~~vl~ 106 (335)
...+++|+|||+|.||+++|+.++..|++|++||++++. +.+.+.|+.. .++++++ .++|+|++++|... +..++.
T Consensus 139 ~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~-~~l~ell-~~aDvV~l~~p~~~~t~~li~ 215 (307)
T 1wwk_A 139 ELEGKTIGIIGFGRIGYQVAKIANALGMNILLYDPYPNE-ERAKEVNGKF-VDLETLL-KESDVVTIHVPLVESTYHLIN 215 (307)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHHTTCEE-CCHHHHH-HHCSEEEECCCCSTTTTTCBC
T ss_pred ccCCceEEEEccCHHHHHHHHHHHHCCCEEEEECCCCCh-hhHhhcCccc-cCHHHHH-hhCCEEEEecCCChHHhhhcC
Confidence 456889999999999999999999999999999999876 4466778754 3777887 78999999999764 444442
Q ss_pred -hccccccCCccEEEEcCCCCchHHHHHHhhCCC------CCceEeccccCCCCCcccccCCCcceecccc
Q 044593 107 -SIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQ------DFDILCTHPMFGPESAKSSWENLPFMYDKVR 170 (335)
Q Consensus 107 -~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~------~~~~v~~HPmaG~~~~~~~~~g~~~i~~~~~ 170 (335)
+. ...++++++++|+++........+.+.+.. ...+...||+.... ..|....++++|..
T Consensus 216 ~~~-l~~mk~ga~lin~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~eP~~~~~---~L~~~~nviltPh~ 282 (307)
T 1wwk_A 216 EER-LKLMKKTAILINTSRGPVVDTNALVKALKEGWIAGAGLDVFEEEPLPKDH---PLTKFDNVVLTPHI 282 (307)
T ss_dssp HHH-HHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSSSCCTTC---GGGGCTTEEECSSC
T ss_pred HHH-HhcCCCCeEEEECCCCcccCHHHHHHHHHhCCCcEEEEecCCCCCCCCCC---hHHhCCCEEECCcc
Confidence 22 135789999999988643333333333321 22466778873322 45666777887754
No 88
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=99.35 E-value=5.7e-12 Score=117.73 Aligned_cols=171 Identities=13% Similarity=0.086 Sum_probs=108.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecCh----------hhHhhcCCCEEEEecCchh
Q 044593 31 SLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADL----------NDLCELHPDVVLLSTSILS 100 (335)
Q Consensus 31 ~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~----------~~~~~~~aDvVIlavp~~~ 100 (335)
.|||+|||+|.||+.+|..|. +|++|++++|+++..+..++.|+....+. .+.. ..+|+||+|||...
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~-~~~D~vilavK~~~ 79 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQEQAAAIQSEGIRLYKGGEEFRADCSADTSIN-SDFDLLVVTVKQHQ 79 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCEEESSCC-SCCSEEEECCCGGG
T ss_pred CCEEEEECCCHHHHHHHHHHh-cCCceEEEECCHHHHHHHHhCCceEecCCCeeccccccccccc-CCCCEEEEEeCHHH
Confidence 489999999999999999999 99999999999876655565666432110 2233 68999999999999
Q ss_pred HHHHHhhccccccCCccEEEEcCCCCchHHHHHHhhCCCCCceEeccccCCCCCc-ccc--cCCC-cceecccccCCChh
Q 044593 101 TQSVLKSIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQDFDILCTHPMFGPESA-KSS--WENL-PFMYDKVRIGNDEE 176 (335)
Q Consensus 101 ~~~vl~~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~~~~~v~~HPmaG~~~~-~~~--~~g~-~~i~~~~~~~~~~~ 176 (335)
+.++++++. + +.+++ |+.+...- ...+.+.+.++.. +++++-...|.... +.. ..+. ...+.. ...+
T Consensus 80 ~~~~l~~l~-~-~~~~~-ivs~~nGi-~~~e~l~~~~~~~-~vl~g~~~~~a~~~~pg~v~~~~~g~~~iG~--~~~~-- 150 (307)
T 3ego_A 80 LQSVFSSLE-R-IGKTN-ILFLQNGM-GHIHDLKDWHVGH-SIYVGIVEHGAVRKSDTAVDHTGLGAIKWSA--FDDA-- 150 (307)
T ss_dssp HHHHHHHTT-S-SCCCE-EEECCSSS-HHHHHHHTCCCSC-EEEEEEECCEEEECSSSEEEEEECCCEEEEE--CTTC--
T ss_pred HHHHHHHhh-c-CCCCe-EEEecCCc-cHHHHHHHhCCCC-cEEEEEEeeceEECCCCEEEEeeeeeEEEEe--CCCC--
Confidence 999999995 4 45666 66654332 2335677766643 45554444433321 100 0111 112211 1111
Q ss_pred HHHHHHHHHHHHHhcCCEEEEeChHHHHHHHHHhhhh
Q 044593 177 RIKRVDKFLDVFAKEGCRMVEMSCFDHDKYAAGSQFV 213 (335)
Q Consensus 177 ~~~~~~~v~~l~~~~G~~v~~~~~~eHD~~~A~~s~l 213 (335)
.+.++.+.++|...|..+.+.+.-....+-.++-..
T Consensus 151 -~~~~~~l~~~l~~ag~~~~~~~di~~~~W~Kl~~N~ 186 (307)
T 3ego_A 151 -EPDRLNILFQHNHSDFPIYYETDWYRLLTGKLIVNA 186 (307)
T ss_dssp -CGGGGTTTTSSCCTTSCEEECSCHHHHHHHHHHHHH
T ss_pred -cHHHHHHHHHhhhCCCCcEechhHHHHHHHHHHHhh
Confidence 123445566677778888777776777766654443
No 89
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=99.34 E-value=3e-12 Score=121.80 Aligned_cols=140 Identities=14% Similarity=0.139 Sum_probs=100.2
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHH-HcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCchh-HHHHH
Q 044593 28 KSTSLKIAVIGFGNFGQFLAKAFA-RHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILS-TQSVL 105 (335)
Q Consensus 28 ~~~~~kI~IIG~G~mG~siA~~L~-~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~-~~~vl 105 (335)
...+++|||||+|.||..+|+.++ ..|++|++||+++...+.+.+.|+....++++++ .++|+|++|+|... +..++
T Consensus 160 ~l~g~~vgIIG~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell-~~aDvVil~vp~~~~t~~li 238 (348)
T 2w2k_A 160 NPRGHVLGAVGLGAIQKEIARKAVHGLGMKLVYYDVAPADAETEKALGAERVDSLEELA-RRSDCVSVSVPYMKLTHHLI 238 (348)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHTCEECSSHHHHH-HHCSEEEECCCCSGGGTTCB
T ss_pred CCCCCEEEEEEECHHHHHHHHHHHHhcCCEEEEECCCCcchhhHhhcCcEEeCCHHHHh-ccCCEEEEeCCCChHHHHHh
Confidence 456789999999999999999999 9999999999998766556666776656788877 78999999999864 44444
Q ss_pred h-hccccccCCccEEEEcCCCCchHHHHHHhhCCCCC-ceEeccccCCCCC--cccccCCCcceecccc
Q 044593 106 K-SIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQDF-DILCTHPMFGPES--AKSSWENLPFMYDKVR 170 (335)
Q Consensus 106 ~-~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~~~-~~v~~HPmaG~~~--~~~~~~g~~~i~~~~~ 170 (335)
. ++ ...++++++|+|+++.+....+.+.+.+..+. ...+ .-.+++|. ....|....++++|.+
T Consensus 239 ~~~~-l~~mk~gailin~srg~~vd~~aL~~aL~~~~i~gag-lDv~~~EP~~~~~L~~~~nviltPH~ 305 (348)
T 2w2k_A 239 DEAF-FAAMKPGSRIVNTARGPVISQDALIAALKSGKLLSAG-LDVHEFEPQVSKELIEMKHVTLTTHI 305 (348)
T ss_dssp CHHH-HHHSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEE-ESSCTTTTSCCHHHHTSSSEEECCSC
T ss_pred hHHH-HhcCCCCCEEEECCCCchhCHHHHHHHHHhCCceEEE-eccCCCCCCCCchhhcCCCEEEcCcC
Confidence 2 22 13578999999999887665566666665432 1122 34566542 1234555566766643
No 90
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=99.33 E-value=1.9e-12 Score=121.76 Aligned_cols=136 Identities=17% Similarity=0.214 Sum_probs=96.7
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcC-CCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCchh-HHHHH
Q 044593 28 KSTSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSR-SDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILS-TQSVL 105 (335)
Q Consensus 28 ~~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr-~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~-~~~vl 105 (335)
...+++|||||+|.||+++|+.++..|++|++||+ +++.. .+.+.|+....++++++ .++|+|++++|... +..++
T Consensus 143 ~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~-~~~~~g~~~~~~l~ell-~~aDvVil~~p~~~~t~~~i 220 (320)
T 1gdh_A 143 KLDNKTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASSS-DEASYQATFHDSLDSLL-SVSQFFSLNAPSTPETRYFF 220 (320)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCCHH-HHHHHTCEECSSHHHHH-HHCSEEEECCCCCTTTTTCB
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcChh-hhhhcCcEEcCCHHHHH-hhCCEEEEeccCchHHHhhc
Confidence 45688999999999999999999999999999999 87653 45566776655788887 78999999999763 44444
Q ss_pred hh-ccccccCCccEEEEcCCCCchHHHHHHhhCCCC------CceEeccccCCCCCcccccCCCcceecccc
Q 044593 106 KS-IPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQD------FDILCTHPMFGPESAKSSWENLPFMYDKVR 170 (335)
Q Consensus 106 ~~-l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~~------~~~v~~HPmaG~~~~~~~~~g~~~i~~~~~ 170 (335)
.. . ...++++++++|+++......+.+.+.+..+ ..+...+| +. ....|...+++++|..
T Consensus 221 ~~~~-l~~mk~gailIn~arg~~vd~~aL~~aL~~g~i~gA~lDv~~~eP---~~-~~~L~~~~nviltPH~ 287 (320)
T 1gdh_A 221 NKAT-IKSLPQGAIVVNTARGDLVDNELVVAALEAGRLAYAGFDVFAGEP---NI-NEGYYDLPNTFLFPHI 287 (320)
T ss_dssp SHHH-HTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTTT---SC-CTTGGGCTTEEECSSC
T ss_pred CHHH-HhhCCCCcEEEECCCCcccCHHHHHHHHHhCCCcEEEEeCCCCCC---CC-CChhhhCCCEEECCcC
Confidence 22 2 2457899999999886433334444433222 23455577 22 1246677778887754
No 91
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=99.33 E-value=1.7e-11 Score=119.54 Aligned_cols=178 Identities=14% Similarity=0.040 Sum_probs=115.3
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCce-ecChhhH---------------hhcCCCEEE
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPF-FADLNDL---------------CELHPDVVL 93 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~-~~~~~~~---------------~~~~aDvVI 93 (335)
.+.|..|||+|.||..+|..|.++||+|++||++++..+...+-+... ...++++ . ++||+||
T Consensus 10 ~~~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~ttd~-~~aDvvi 88 (431)
T 3ojo_A 10 HGSKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVSTTP-EASDVFI 88 (431)
T ss_dssp --CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESSC-CCCSEEE
T ss_pred cCCccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEeCch-hhCCEEE
Confidence 357899999999999999999999999999999998776554422111 0111111 2 5799999
Q ss_pred EecCchh------------HHHHHhhccccccCCccEEEEcCCCCchHHHHHHhh----CCC--CC-ceEeccccCCCCC
Q 044593 94 LSTSILS------------TQSVLKSIPFQRLKRSTLFVDVLSVKEFPRNLFLKY----LPQ--DF-DILCTHPMFGPES 154 (335)
Q Consensus 94 lavp~~~------------~~~vl~~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~----l~~--~~-~~v~~HPmaG~~~ 154 (335)
+|||... +..+.+.+. +.++++++|++.+++.....+.+.+. .+. +. .++...|-+..+.
T Consensus 89 i~VpTp~~~~~~~~~Dl~~V~~~~~~i~-~~l~~g~iVV~~STV~pgtt~~v~~~i~e~~g~~~~~d~~v~~~Pe~~~~G 167 (431)
T 3ojo_A 89 IAVPTPNNDDQYRSCDISLVMRALDSIL-PFLKKGNTIIVESTIAPKTMDDFVKPVIENLGFTIGEDIYLVHCPERVLPG 167 (431)
T ss_dssp ECCCCCBCSSSSCBBCCHHHHHHHHHHG-GGCCTTEEEEECSCCCTTHHHHTHHHHHHTTTCCBTTTEEEEECCCCCCTT
T ss_pred EEeCCCccccccCCccHHHHHHHHHHHH-HhCCCCCEEEEecCCChhHHHHHHHHHHHHcCCCcCCCeEEEECCCcCCCc
Confidence 9999865 567777885 67899999999998876665554332 221 11 1344456555442
Q ss_pred cc-cccCCCcceecccccCCChhHHHHHHHHHHHHHhcCCEEEEeChHHHHHHHHHhhhhHHH
Q 044593 155 AK-SSWENLPFMYDKVRIGNDEERIKRVDKFLDVFAKEGCRMVEMSCFDHDKYAAGSQFVTHT 216 (335)
Q Consensus 155 ~~-~~~~g~~~i~~~~~~~~~~~~~~~~~~v~~l~~~~G~~v~~~~~~eHD~~~A~~s~lph~ 216 (335)
.. ..+...+.++ .+.+ ++..+.++++++.++..++.++...-.+++.++.+.-..
T Consensus 168 ~A~~~~~~p~~Iv----~G~~---~~~~~~~~~ly~~~~~~~~~~~~~~~AE~~Kl~~N~~~a 223 (431)
T 3ojo_A 168 KILEELVHNNRII----GGVT---KACIEAGKRVYRTFVQGEMIETDARTAEMSKLMENTYRD 223 (431)
T ss_dssp SHHHHHHHSCEEE----EESS---HHHHHHHHHHHTTTCCSCEEEEEHHHHHHHHHHHHHHHH
T ss_pred chhhcccCCCEEE----EeCC---HHHHHHHHHHHHHHhCCcEEeCCHHHHHHHHHHHHHHHH
Confidence 11 0001111222 2333 467789999999998765555555667777777665543
No 92
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=99.32 E-value=5e-12 Score=119.51 Aligned_cols=135 Identities=13% Similarity=0.186 Sum_probs=98.7
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCchh-HHHHHh
Q 044593 28 KSTSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILS-TQSVLK 106 (335)
Q Consensus 28 ~~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~-~~~vl~ 106 (335)
...+++|||||+|.||+++|+.++..|++|++||+++... .+.+.|+.. .++++++ +++|+|++++|... +..++.
T Consensus 162 ~l~g~tvgIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~~~~g~~~-~~l~ell-~~aDvV~l~~P~t~~t~~li~ 238 (335)
T 2g76_A 162 ELNGKTLGILGLGRIGREVATRMQSFGMKTIGYDPIISPE-VSASFGVQQ-LPLEEIW-PLCDFITVHTPLLPSTTGLLN 238 (335)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSCHH-HHHHTTCEE-CCHHHHG-GGCSEEEECCCCCTTTTTSBC
T ss_pred CCCcCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcchh-hhhhcCcee-CCHHHHH-hcCCEEEEecCCCHHHHHhhC
Confidence 4578899999999999999999999999999999987653 466778754 4788887 79999999999874 455542
Q ss_pred -hccccccCCccEEEEcCCCCchHHHHHHhhCCCC------CceEeccccCCCCCcccccCCCcceecccc
Q 044593 107 -SIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQD------FDILCTHPMFGPESAKSSWENLPFMYDKVR 170 (335)
Q Consensus 107 -~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~~------~~~v~~HPmaG~~~~~~~~~g~~~i~~~~~ 170 (335)
+. ...++++++++|+++......+.+.+.+..+ ..++..||+.. ...|....++++|..
T Consensus 239 ~~~-l~~mk~gailIN~arg~vvd~~aL~~aL~~g~i~gA~lDV~~~EP~~~----~~L~~~~nvilTPH~ 304 (335)
T 2g76_A 239 DNT-FAQCKKGVRVVNCARGGIVDEGALLRALQSGQCAGAALDVFTEEPPRD----RALVDHENVISCPHL 304 (335)
T ss_dssp HHH-HTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSEEEEEESCCSSSSCSC----CHHHHSTTEEECSSC
T ss_pred HHH-HhhCCCCcEEEECCCccccCHHHHHHHHHhCCccEEEEeecCCCCCCC----chHHhCCCEEECCcC
Confidence 22 2457899999999887544334444444321 24677888532 235666677887754
No 93
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=99.32 E-value=5.4e-12 Score=121.55 Aligned_cols=138 Identities=17% Similarity=0.175 Sum_probs=98.1
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCch-hHHHHHh
Q 044593 28 KSTSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSIL-STQSVLK 106 (335)
Q Consensus 28 ~~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~-~~~~vl~ 106 (335)
...+++|||||+|.||+.+|+.++..|++|++||+++...+.+.+.|+....++++++ .++|+|++++|.. .+..++.
T Consensus 188 ~l~gktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~~~G~~~~~~l~ell-~~aDvV~l~~Plt~~t~~li~ 266 (393)
T 2nac_A 188 DLEAMHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWHATREDMY-PVCDVVTLNCPLHPETEHMIN 266 (393)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEECSSHHHHG-GGCSEEEECSCCCTTTTTCBS
T ss_pred cCCCCEEEEEeECHHHHHHHHHHHhCCCEEEEEcCCccchhhHhhcCceecCCHHHHH-hcCCEEEEecCCchHHHHHhh
Confidence 4578899999999999999999999999999999998766656667877656788888 8999999999975 3444552
Q ss_pred -hccccccCCccEEEEcCCCCchHHHHHHhhCCCC------CceEeccccCCCCCcccccCCCcceecccc
Q 044593 107 -SIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQD------FDILCTHPMFGPESAKSSWENLPFMYDKVR 170 (335)
Q Consensus 107 -~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~~------~~~v~~HPmaG~~~~~~~~~g~~~i~~~~~ 170 (335)
+. ...++++++++|++.......+.+.+.+..+ ..+...+|+...+ ..|....++++|.+
T Consensus 267 ~~~-l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~gA~lDV~~~EP~~~~~---pL~~~~nvilTPHi 333 (393)
T 2nac_A 267 DET-LKLFKRGAYIVNTARGKLCDRDAVARALESGRLAGYAGDVWFPQPAPKDH---PWRTMPYNGMTPHI 333 (393)
T ss_dssp HHH-HTTSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEESCCSSSSCCTTC---GGGTSTTBCCCCSC
T ss_pred HHH-HhhCCCCCEEEECCCchHhhHHHHHHHHHcCCeeEEEEEecCCCCCCCCC---hhHcCCCEEECCCC
Confidence 22 2457899999999876543334455544332 1234445653211 34555566777654
No 94
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=99.31 E-value=1.3e-11 Score=127.70 Aligned_cols=158 Identities=13% Similarity=0.134 Sum_probs=118.8
Q ss_pred cCCCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhC----------------------CCceecChhhH
Q 044593 27 VKSTSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQL----------------------NAPFFADLNDL 84 (335)
Q Consensus 27 ~~~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~----------------------g~~~~~~~~~~ 84 (335)
+.+...||+|||+|.||+.||..++.+|++|+++|++++..+.+.+. .+..+++.+++
T Consensus 312 ~~~~i~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l 391 (742)
T 3zwc_A 312 SAQPVSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTKEL 391 (742)
T ss_dssp CCCCCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEEESCGGGG
T ss_pred CcccccEEEEEcccHHHHHHHHHHHhCCCchhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcccCcHHHH
Confidence 34567899999999999999999999999999999998754432210 11234555555
Q ss_pred hhcCCCEEEEecCchh--HHHHHhhccccccCCccEEEEcCCCCchHHHHHHhhCCCCCceEeccccCCCCCcccccCCC
Q 044593 85 CELHPDVVLLSTSILS--TQSVLKSIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQDFDILCTHPMFGPESAKSSWENL 162 (335)
Q Consensus 85 ~~~~aDvVIlavp~~~--~~~vl~~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~~~~~v~~HPmaG~~~~~~~~~g~ 162 (335)
.+||+||-|+|.+. ..+++.++. ..+++++++...+|+ ..+..+.+.....-+|++.|+...+..-
T Consensus 392 --~~aDlVIEAV~E~l~iK~~vf~~le-~~~~~~aIlASNTSs--l~i~~ia~~~~~p~r~ig~HFfnP~~~m------- 459 (742)
T 3zwc_A 392 --STVDLVVEAVFEDMNLKKKVFAELS-ALCKPGAFLCTNTSA--LNVDDIASSTDRPQLVIGTHFFSPAHVM------- 459 (742)
T ss_dssp --GSCSEEEECCCSCHHHHHHHHHHHH-HHSCTTCEEEECCSS--SCHHHHHTTSSCGGGEEEEECCSSTTTC-------
T ss_pred --hhCCEEEEeccccHHHHHHHHHHHh-hcCCCCceEEecCCc--CChHHHHhhcCCccccccccccCCCCCC-------
Confidence 79999999999875 568899985 678999999987766 4456677666655689999987665532
Q ss_pred cceecccccCCChhHHHHHHHHHHHHHhcCCEEEEeC
Q 044593 163 PFMYDKVRIGNDEERIKRVDKFLDVFAKEGCRMVEMS 199 (335)
Q Consensus 163 ~~i~~~~~~~~~~~~~~~~~~v~~l~~~~G~~v~~~~ 199 (335)
+ +++ ++.++.++++.++.+.++.+.+|..++.+.
T Consensus 460 ~-LVE--vi~g~~Ts~e~~~~~~~~~~~lgK~pV~vk 493 (742)
T 3zwc_A 460 R-LLE--VIPSRYSSPTTIATVMSLSKKIGKIGVVVG 493 (742)
T ss_dssp C-EEE--EEECSSCCHHHHHHHHHHHHHTTCEEEECC
T ss_pred c-eEE--EecCCCCCHHHHHHHHHHHHHhCCCCcccC
Confidence 1 222 234556677889999999999999888774
No 95
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=99.31 E-value=3.6e-12 Score=120.46 Aligned_cols=132 Identities=13% Similarity=0.256 Sum_probs=94.9
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCch-hHHHHHh
Q 044593 28 KSTSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSIL-STQSVLK 106 (335)
Q Consensus 28 ~~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~-~~~~vl~ 106 (335)
...+++|+|||+|.||+.+|+.++..|++|++|||+++... |+....++++++ +++|+|++++|.. .+..++.
T Consensus 161 ~l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~dr~~~~~~-----g~~~~~~l~ell-~~aDvVil~vP~~~~t~~li~ 234 (333)
T 3ba1_A 161 KFSGKRVGIIGLGRIGLAVAERAEAFDCPISYFSRSKKPNT-----NYTYYGSVVELA-SNSDILVVACPLTPETTHIIN 234 (333)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSCCTTC-----CSEEESCHHHHH-HTCSEEEECSCCCGGGTTCBC
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCchhcc-----CceecCCHHHHH-hcCCEEEEecCCChHHHHHhh
Confidence 45678999999999999999999999999999999986432 555567888887 7999999999986 4555552
Q ss_pred -hccccccCCccEEEEcCCCCchHHHHHHhhCCCC------CceEeccccCCCCCcccccCCCcceecccc
Q 044593 107 -SIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQD------FDILCTHPMFGPESAKSSWENLPFMYDKVR 170 (335)
Q Consensus 107 -~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~~------~~~v~~HPmaG~~~~~~~~~g~~~i~~~~~ 170 (335)
+. ...++++++|+|+++.+....+.+.+.+..+ ..|...+|+.. ...|....++++|.+
T Consensus 235 ~~~-l~~mk~gailIn~srG~~vd~~aL~~aL~~g~i~ga~lDv~~~EP~~~----~~L~~~~nviltPH~ 300 (333)
T 3ba1_A 235 REV-IDALGPKGVLINIGRGPHVDEPELVSALVEGRLGGAGLDVFEREPEVP----EKLFGLENVVLLPHV 300 (333)
T ss_dssp HHH-HHHHCTTCEEEECSCGGGBCHHHHHHHHHHTSSCEEEESCCTTTTCCC----GGGGGCTTEEECSSC
T ss_pred HHH-HhcCCCCCEEEECCCCchhCHHHHHHHHHcCCCeEEEEecCCCCCCCc----chhhcCCCEEECCcC
Confidence 22 1357899999999987655444554444322 24556677533 235555566777653
No 96
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=99.31 E-value=3.6e-12 Score=118.12 Aligned_cols=132 Identities=14% Similarity=0.212 Sum_probs=92.3
Q ss_pred cCCCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCch-hHHHHH
Q 044593 27 VKSTSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSIL-STQSVL 105 (335)
Q Consensus 27 ~~~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~-~~~~vl 105 (335)
....+++|||||+|.||+++|+.++..|++|++|||+++..+. .....++++++ ++||+|++++|.. .+..++
T Consensus 118 ~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~-----~~~~~~l~ell-~~aDiV~l~~P~t~~t~~li 191 (290)
T 3gvx_A 118 TLLYGKALGILGYGGIGRRVAHLAKAFGMRVIAYTRSSVDQNV-----DVISESPADLF-RQSDFVLIAIPLTDKTRGMV 191 (290)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSCCCTTC-----SEECSSHHHHH-HHCSEEEECCCCCTTTTTCB
T ss_pred eeeecchheeeccCchhHHHHHHHHhhCcEEEEEecccccccc-----ccccCChHHHh-hccCeEEEEeeccccchhhh
Confidence 3456889999999999999999999999999999999765431 33455788888 7999999999964 344444
Q ss_pred h-hccccccCCccEEEEcCCCCchHHHHHHhhCCCC-C-----ceEeccccCCCCCcccccCCCcceeccccc
Q 044593 106 K-SIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQD-F-----DILCTHPMFGPESAKSSWENLPFMYDKVRI 171 (335)
Q Consensus 106 ~-~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~~-~-----~~v~~HPmaG~~~~~~~~~g~~~i~~~~~~ 171 (335)
. +. ...++++++++|++..+....+.+.+.+..+ . .+....|+ ...|....++++|.+-
T Consensus 192 ~~~~-l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~ga~lDV~~~EP~------~pL~~~~nvilTPHia 257 (290)
T 3gvx_A 192 NSRL-LANARKNLTIVNVARADVVSKPDMIGFLKERSDVWYLSDVWWNEPE------ITETNLRNAILSPHVA 257 (290)
T ss_dssp SHHH-HTTCCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCCTTTTS------CCSCCCSSEEECCSCS
T ss_pred hHHH-HhhhhcCceEEEeehhcccCCcchhhhhhhccceEEeeccccCCcc------cchhhhhhhhcCcccc
Confidence 2 22 2457899999999987655555555444322 2 23334444 2345555677777643
No 97
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=99.30 E-value=1.8e-11 Score=115.89 Aligned_cols=136 Identities=18% Similarity=0.177 Sum_probs=81.4
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCch-hHHHHHh
Q 044593 28 KSTSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSIL-STQSVLK 106 (335)
Q Consensus 28 ~~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~-~~~~vl~ 106 (335)
...+++|||||+|.||+.+|+.++..|++|++|||++... .+.....++++++ ++||+|++++|.. .+..++.
T Consensus 168 ~l~gktiGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~-----~~~~~~~sl~ell-~~aDvVil~vP~t~~t~~li~ 241 (340)
T 4dgs_A 168 SPKGKRIGVLGLGQIGRALASRAEAFGMSVRYWNRSTLSG-----VDWIAHQSPVDLA-RDSDVLAVCVAASAATQNIVD 241 (340)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCTT-----SCCEECSSHHHHH-HTCSEEEECC----------C
T ss_pred cccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCcccc-----cCceecCCHHHHH-hcCCEEEEeCCCCHHHHHHhh
Confidence 4568999999999999999999999999999999987642 3444556888888 8999999999954 3555552
Q ss_pred -hccccccCCccEEEEcCCCCchHHHHHHhhCCCCCceEeccccCCCCCc--ccccCCCcceecccc
Q 044593 107 -SIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQDFDILCTHPMFGPESA--KSSWENLPFMYDKVR 170 (335)
Q Consensus 107 -~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~~~~~v~~HPmaG~~~~--~~~~~g~~~i~~~~~ 170 (335)
+. ...++++++++|++.......+.+.+.+..+.-.-.+..++..|.. ...|.-..++++|.+
T Consensus 242 ~~~-l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i~gA~LDVf~~EP~~~~~L~~~~nvilTPHi 307 (340)
T 4dgs_A 242 ASL-LQALGPEGIVVNVARGNVVDEDALIEALKSGTIAGAGLDVFVNEPAIRSEFHTTPNTVLMPHQ 307 (340)
T ss_dssp HHH-HHHTTTTCEEEECSCC--------------CCSSEEEESCCSSSSSCCSHHHHSSSEEECSSC
T ss_pred HHH-HhcCCCCCEEEECCCCcccCHHHHHHHHHcCCceEEEeCCcCCCCCCccchhhCCCEEEcCcC
Confidence 22 2458899999999877655556666666543212223445554431 123343445666653
No 98
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=99.28 E-value=1.5e-11 Score=116.50 Aligned_cols=140 Identities=14% Similarity=0.183 Sum_probs=96.3
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCch-hHHHHHh
Q 044593 28 KSTSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSIL-STQSVLK 106 (335)
Q Consensus 28 ~~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~-~~~~vl~ 106 (335)
...+++|||||+|.||+.+|+.++..|++|++|||++...+... |+....++++++ ++||+|++++|.. .+..++.
T Consensus 170 ~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~--g~~~~~~l~ell-~~sDvV~l~~Plt~~T~~li~ 246 (345)
T 4g2n_A 170 GLTGRRLGIFGMGRIGRAIATRARGFGLAIHYHNRTRLSHALEE--GAIYHDTLDSLL-GASDIFLIAAPGRPELKGFLD 246 (345)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHT--TCEECSSHHHHH-HTCSEEEECSCCCGGGTTCBC
T ss_pred ccCCCEEEEEEeChhHHHHHHHHHHCCCEEEEECCCCcchhhhc--CCeEeCCHHHHH-hhCCEEEEecCCCHHHHHHhC
Confidence 45688999999999999999999999999999999976554332 666666889988 8999999999964 3444442
Q ss_pred hccccccCCccEEEEcCCCCchHHHHHHhhCCCCCceEeccccCCCCCc--ccccCCCcceecccc
Q 044593 107 SIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQDFDILCTHPMFGPESA--KSSWENLPFMYDKVR 170 (335)
Q Consensus 107 ~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~~~~~v~~HPmaG~~~~--~~~~~g~~~i~~~~~ 170 (335)
.-....++++++++|++..+....+.+.+.+..+.-.-.+..++..|.. ...|.-..++++|.+
T Consensus 247 ~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~gA~LDVf~~EP~~~~pL~~~~nvilTPHi 312 (345)
T 4g2n_A 247 HDRIAKIPEGAVVINISRGDLINDDALIEALRSKHLFAAGLDVFANEPAIDPRYRSLDNIFLTPHI 312 (345)
T ss_dssp HHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTTTSCCTTGGGCTTEEECCSC
T ss_pred HHHHhhCCCCcEEEECCCCchhCHHHHHHHHHhCCceEEEecCCCCCCCCCchHHhCCCEEEcCcc
Confidence 1112457899999999877655556665555433212223445554431 123444456776654
No 99
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=99.27 E-value=9.6e-12 Score=117.02 Aligned_cols=141 Identities=13% Similarity=0.184 Sum_probs=95.0
Q ss_pred cCCCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCch-hHHHHH
Q 044593 27 VKSTSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSIL-STQSVL 105 (335)
Q Consensus 27 ~~~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~-~~~~vl 105 (335)
....+++|||||+|.||+.+|+.++..|++|++|||+++..+.+.. .....++++++ ++||+|++++|.. .+..++
T Consensus 133 ~~l~gktvGIiGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~--~~~~~~l~ell-~~aDvV~l~lPlt~~t~~li 209 (324)
T 3evt_A 133 STLTGQQLLIYGTGQIGQSLAAKASALGMHVIGVNTTGHPADHFHE--TVAFTATADAL-ATANFIVNALPLTPTTHHLF 209 (324)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCCCCTTCSE--EEEGGGCHHHH-HHCSEEEECCCCCGGGTTCB
T ss_pred ccccCCeEEEECcCHHHHHHHHHHHhCCCEEEEECCCcchhHhHhh--ccccCCHHHHH-hhCCEEEEcCCCchHHHHhc
Confidence 3456889999999999999999999999999999998764331111 11234677887 7899999999964 344444
Q ss_pred hhccccccCCccEEEEcCCCCchHHHHHHhhCCCCCceEeccccCCCCCc---ccccCCCcceecccc
Q 044593 106 KSIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQDFDILCTHPMFGPESA---KSSWENLPFMYDKVR 170 (335)
Q Consensus 106 ~~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~~~~~v~~HPmaG~~~~---~~~~~g~~~i~~~~~ 170 (335)
..-....++++++++|++..+....+.+.+.+..+.-.-.+...+..|.- ...|.-..++++|.+
T Consensus 210 ~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvilTPHi 277 (324)
T 3evt_A 210 STELFQQTKQQPMLINIGRGPAVDTTALMTALDHHQLSMAALDVTEPEPLPTDHPLWQRDDVLITPHI 277 (324)
T ss_dssp SHHHHHTCCSCCEEEECSCGGGBCHHHHHHHHHTTSCSEEEESSCSSSSCCTTCGGGGCSSEEECCSC
T ss_pred CHHHHhcCCCCCEEEEcCCChhhhHHHHHHHHHhCCceEEEeCCCCCCCCCCCChhhcCCCEEEcCcc
Confidence 21112457899999999987666556666665433211234566666541 134554556777654
No 100
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=99.26 E-value=1.1e-11 Score=117.85 Aligned_cols=138 Identities=14% Similarity=0.208 Sum_probs=97.0
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCch-hHHHHHh
Q 044593 28 KSTSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSIL-STQSVLK 106 (335)
Q Consensus 28 ~~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~-~~~~vl~ 106 (335)
...+++|||||+|.||+.+|+.++..|++|++||+++... .+...|+....++++++ .++|+|++++|.. .+..++.
T Consensus 165 ~l~g~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~~~~g~~~~~~l~ell-~~aDvV~l~~P~t~~t~~li~ 242 (347)
T 1mx3_A 165 RIRGETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDG-VERALGLQRVSTLQDLL-FHSDCVTLHCGLNEHNHHLIN 242 (347)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCTT-HHHHHTCEECSSHHHHH-HHCSEEEECCCCCTTCTTSBS
T ss_pred CCCCCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcchh-hHhhcCCeecCCHHHHH-hcCCEEEEcCCCCHHHHHHhH
Confidence 4568899999999999999999999999999999987543 24455776556788887 7899999999985 3444442
Q ss_pred -hccccccCCccEEEEcCCCCchHHHHHHhhCCCC------CceEeccccCCCCCcccccCCCcceecccc
Q 044593 107 -SIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQD------FDILCTHPMFGPESAKSSWENLPFMYDKVR 170 (335)
Q Consensus 107 -~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~~------~~~v~~HPmaG~~~~~~~~~g~~~i~~~~~ 170 (335)
+. ...++++++++|+++.+....+.+.+.+..+ ..+...+|+.... ...+....++++|.+
T Consensus 243 ~~~-l~~mk~gailIN~arg~~vd~~aL~~aL~~g~i~gA~lDV~~~EP~~~~~--~~L~~~~nvi~tPHi 310 (347)
T 1mx3_A 243 DFT-VKQMRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQ--GPLKDAPNLICTPHA 310 (347)
T ss_dssp HHH-HTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTS--STTTTCSSEEECSSC
T ss_pred HHH-HhcCCCCCEEEECCCChHHhHHHHHHHHHhCCCcEEEEeecccCCCCCCC--chHHhCCCEEEEchH
Confidence 22 2457899999999988766555565555322 2455667764211 123344456666643
No 101
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=99.26 E-value=9.5e-12 Score=116.52 Aligned_cols=131 Identities=18% Similarity=0.250 Sum_probs=93.7
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCchh-HHHHHh
Q 044593 28 KSTSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILS-TQSVLK 106 (335)
Q Consensus 28 ~~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~-~~~vl~ 106 (335)
...+++|||||+|.||+++|+.++..|++|++|||+++... + ...++++++ .++|+|++++|... +..++.
T Consensus 141 ~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~------~-~~~~l~ell-~~aDvV~l~~p~~~~t~~li~ 212 (311)
T 2cuk_A 141 DLQGLTLGLVGMGRIGQAVAKRALAFGMRVVYHARTPKPLP------Y-PFLSLEELL-KEADVVSLHTPLTPETHRLLN 212 (311)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSSS------S-CBCCHHHHH-HHCSEEEECCCCCTTTTTCBC
T ss_pred CCCCCEEEEEEECHHHHHHHHHHHHCCCEEEEECCCCcccc------c-ccCCHHHHH-hhCCEEEEeCCCChHHHhhcC
Confidence 45678999999999999999999999999999999876543 2 245677877 78999999999873 555553
Q ss_pred -hccccccCCccEEEEcCCCCchHHHHHHhhCCC-----CCceEeccccCCCCCcccccCCCcceecccc
Q 044593 107 -SIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQ-----DFDILCTHPMFGPESAKSSWENLPFMYDKVR 170 (335)
Q Consensus 107 -~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~-----~~~~v~~HPmaG~~~~~~~~~g~~~i~~~~~ 170 (335)
+. ...++++++++|+++......+.+.+.+.. ...+...||+.... ..|....++++|..
T Consensus 213 ~~~-l~~mk~ga~lin~srg~~vd~~aL~~aL~g~i~ga~lDv~~~eP~~~~~---~L~~~~nviltPh~ 278 (311)
T 2cuk_A 213 RER-LFAMKRGAILLNTARGALVDTEALVEALRGHLFGAGLDVTDPEPLPPGH---PLYALPNAVITPHI 278 (311)
T ss_dssp HHH-HTTSCTTCEEEECSCGGGBCHHHHHHHHTTTSSEEEESSCSSSSCCTTS---GGGGCTTEEECCSC
T ss_pred HHH-HhhCCCCcEEEECCCCCccCHHHHHHHHhCcCCEEEEeeCCCCCCCCCC---hhhhCCCEEECCcC
Confidence 22 145789999999998654433445554441 12344556764322 46666777887754
No 102
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=99.25 E-value=1.1e-11 Score=116.95 Aligned_cols=107 Identities=17% Similarity=0.337 Sum_probs=82.1
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCchh-HHHHHh
Q 044593 28 KSTSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILS-TQSVLK 106 (335)
Q Consensus 28 ~~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~-~~~vl~ 106 (335)
...+++|+|||+|.||..+|..++..|++|++||++++..+.+.+.|+... ++++++ .++|+|++++|... +..++.
T Consensus 152 ~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-~l~e~l-~~aDvVi~~vp~~~~t~~~i~ 229 (330)
T 2gcg_A 152 GLTQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFV-STPELA-AQSDFIVVACSLTPATEGLCN 229 (330)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHGGGTCCEEEEESSSCCHHHHHTTTCEEC-CHHHHH-HHCSEEEECCCCCTTTTTCBS
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcchhHHHhcCceeC-CHHHHH-hhCCEEEEeCCCChHHHHhhC
Confidence 456789999999999999999999999999999999876655666777655 778877 78999999999863 344442
Q ss_pred -hccccccCCccEEEEcCCCCchHHHHHHhhC
Q 044593 107 -SIPFQRLKRSTLFVDVLSVKEFPRNLFLKYL 137 (335)
Q Consensus 107 -~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l 137 (335)
++. +.++++++++++++.+....+.+.+.+
T Consensus 230 ~~~~-~~mk~gailIn~srg~~v~~~aL~~aL 260 (330)
T 2gcg_A 230 KDFF-QKMKETAVFINISRGDVVNQDDLYQAL 260 (330)
T ss_dssp HHHH-HHSCTTCEEEECSCGGGBCHHHHHHHH
T ss_pred HHHH-hcCCCCcEEEECCCCcccCHHHHHHHH
Confidence 231 357889999999887654444444444
No 103
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=99.25 E-value=2.5e-11 Score=113.82 Aligned_cols=137 Identities=13% Similarity=0.142 Sum_probs=93.2
Q ss_pred cCCCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCce---ecChhhHhhcCCCEEEEecCch-hHH
Q 044593 27 VKSTSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPF---FADLNDLCELHPDVVLLSTSIL-STQ 102 (335)
Q Consensus 27 ~~~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~---~~~~~~~~~~~aDvVIlavp~~-~~~ 102 (335)
....+++|||||+|.||+.+|+.++..|++|++|||+++..+ ++.. ..++++++ ++||+|++++|.. .+.
T Consensus 135 ~~l~g~tvGIiG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~-----~~~~~~~~~~l~ell-~~aDiV~l~~Plt~~t~ 208 (315)
T 3pp8_A 135 YTREEFSVGIMGAGVLGAKVAESLQAWGFPLRCWSRSRKSWP-----GVESYVGREELRAFL-NQTRVLINLLPNTAQTV 208 (315)
T ss_dssp CCSTTCCEEEECCSHHHHHHHHHHHTTTCCEEEEESSCCCCT-----TCEEEESHHHHHHHH-HTCSEEEECCCCCGGGT
T ss_pred CCcCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEcCCchhhh-----hhhhhcccCCHHHHH-hhCCEEEEecCCchhhh
Confidence 345689999999999999999999999999999999876432 2221 14677887 8999999999965 455
Q ss_pred HHHh-hccccccCCccEEEEcCCCCchHHHHHHhhCCCCCceEeccccCCCCCc---ccccCCCcceecccc
Q 044593 103 SVLK-SIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQDFDILCTHPMFGPESA---KSSWENLPFMYDKVR 170 (335)
Q Consensus 103 ~vl~-~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~~~~~v~~HPmaG~~~~---~~~~~g~~~i~~~~~ 170 (335)
.++. +. ...++++++++|++.......+.+.+.+..+.-.-.+..++.+|.- ...|.-..++++|.+
T Consensus 209 ~li~~~~-l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvilTPHi 279 (315)
T 3pp8_A 209 GIINSEL-LDQLPDGAYVLNLARGVHVQEADLLAALDSGKLKGAMLDVFSQEPLPQESPLWRHPRVAMTPHI 279 (315)
T ss_dssp TCBSHHH-HTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTCGGGGCTTEEECSSC
T ss_pred hhccHHH-HhhCCCCCEEEECCCChhhhHHHHHHHHHhCCccEEEcCCCCCCCCCCCChhhcCCCEEECCCC
Confidence 5552 22 2458899999999877655556665555433212223456655531 123444456666654
No 104
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=99.25 E-value=1.3e-11 Score=117.36 Aligned_cols=108 Identities=19% Similarity=0.268 Sum_probs=81.5
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCchh-HHHHHh
Q 044593 28 KSTSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILS-TQSVLK 106 (335)
Q Consensus 28 ~~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~-~~~vl~ 106 (335)
...+++|||||+|.||+.+|+.++..|++|++||++. ..+.+.+.|+....++++++ +++|+|++++|... +..++.
T Consensus 157 ~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~-~~~~~~~~g~~~~~~l~ell-~~aDiV~l~~Plt~~t~~li~ 234 (352)
T 3gg9_A 157 VLKGQTLGIFGYGKIGQLVAGYGRAFGMNVLVWGREN-SKERARADGFAVAESKDALF-EQSDVLSVHLRLNDETRSIIT 234 (352)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSHH-HHHHHHHTTCEECSSHHHHH-HHCSEEEECCCCSTTTTTCBC
T ss_pred cCCCCEEEEEeECHHHHHHHHHHHhCCCEEEEECCCC-CHHHHHhcCceEeCCHHHHH-hhCCEEEEeccCcHHHHHhhC
Confidence 4568999999999999999999999999999999985 33446677887777888888 79999999999653 443332
Q ss_pred hccccccCCccEEEEcCCCCchHHHHHHhhC
Q 044593 107 SIPFQRLKRSTLFVDVLSVKEFPRNLFLKYL 137 (335)
Q Consensus 107 ~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l 137 (335)
.-....++++++++|++..+....+.+.+.+
T Consensus 235 ~~~l~~mk~gailIN~aRg~~vd~~aL~~aL 265 (352)
T 3gg9_A 235 VADLTRMKPTALFVNTSRAELVEENGMVTAL 265 (352)
T ss_dssp HHHHTTSCTTCEEEECSCGGGBCTTHHHHHH
T ss_pred HHHHhhCCCCcEEEECCCchhhcHHHHHHHH
Confidence 1112457899999999876543334444333
No 105
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=99.25 E-value=3.1e-11 Score=113.46 Aligned_cols=140 Identities=16% Similarity=0.177 Sum_probs=94.3
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCch-hHHHHHh
Q 044593 28 KSTSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSIL-STQSVLK 106 (335)
Q Consensus 28 ~~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~-~~~~vl~ 106 (335)
...+++|||||+|.||+.+|+.++..|++|++|||++.....+ .+.....++++++ ++||+|++++|.. .+..++.
T Consensus 137 ~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~--~~~~~~~~l~ell-~~aDvV~l~lPlt~~T~~li~ 213 (324)
T 3hg7_A 137 GLKGRTLLILGTGSIGQHIAHTGKHFGMKVLGVSRSGRERAGF--DQVYQLPALNKML-AQADVIVSVLPATRETHHLFT 213 (324)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCCTTC--SEEECGGGHHHHH-HTCSEEEECCCCCSSSTTSBC
T ss_pred ccccceEEEEEECHHHHHHHHHHHhCCCEEEEEcCChHHhhhh--hcccccCCHHHHH-hhCCEEEEeCCCCHHHHHHhH
Confidence 4568899999999999999999999999999999987533211 1112235678887 8999999999965 3455553
Q ss_pred hccccccCCccEEEEcCCCCchHHHHHHhhCCCCCceEeccccCCCCCc---ccccCCCcceecccc
Q 044593 107 SIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQDFDILCTHPMFGPESA---KSSWENLPFMYDKVR 170 (335)
Q Consensus 107 ~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~~~~~v~~HPmaG~~~~---~~~~~g~~~i~~~~~ 170 (335)
.-....+++|++++|++.......+.+.+.+..+.-.-.+..++..|.- ...|.-..++++|.+
T Consensus 214 ~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ga~lDV~~~EPl~~~~pL~~~~nvilTPHi 280 (324)
T 3hg7_A 214 ASRFEHCKPGAILFNVGRGNAINEGDLLTALRTGKLGMAVLDVFEQEPLPADSPLWGQPNLIITPHN 280 (324)
T ss_dssp TTTTTCSCTTCEEEECSCGGGBCHHHHHHHHHTTSSSEEEESCCSSSSCCTTCTTTTCTTEEECCSC
T ss_pred HHHHhcCCCCcEEEECCCchhhCHHHHHHHHHcCCceEEEeccCCCCCCCCCChhhcCCCEEEeCCC
Confidence 2212468999999999877655556666555433211233456655541 123444456666654
No 106
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=99.22 E-value=3e-11 Score=114.20 Aligned_cols=137 Identities=17% Similarity=0.277 Sum_probs=93.1
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCch-hHHHHHh
Q 044593 28 KSTSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSIL-STQSVLK 106 (335)
Q Consensus 28 ~~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~-~~~~vl~ 106 (335)
...+++|+|||+|.||+.+|+.++..|++|++||++++. +.+.+.|+.. .++++++ .++|+|++|+|.. .+..++.
T Consensus 143 ~l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~-~~l~e~l-~~aDiVil~vp~~~~t~~~i~ 219 (333)
T 2d0i_A 143 SLYGKKVGILGMGAIGKAIARRLIPFGVKLYYWSRHRKV-NVEKELKARY-MDIDELL-EKSDIVILALPLTRDTYHIIN 219 (333)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCH-HHHHHHTEEE-CCHHHHH-HHCSEEEECCCCCTTTTTSBC
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcch-hhhhhcCcee-cCHHHHH-hhCCEEEEcCCCChHHHHHhC
Confidence 457889999999999999999999999999999999876 4455566654 3777777 7899999999988 5555554
Q ss_pred h-ccccccCCccEEEEcCCCCchHHHHHHhhCCCC-CceEeccccCCCCC--cccccCCC-cceecccc
Q 044593 107 S-IPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQD-FDILCTHPMFGPES--AKSSWENL-PFMYDKVR 170 (335)
Q Consensus 107 ~-l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~~-~~~v~~HPmaG~~~--~~~~~~g~-~~i~~~~~ 170 (335)
+ + .+.++++ +++|++.........+.+.+..+ ....+.+ .+++|. ....|... .++++|.+
T Consensus 220 ~~~-~~~mk~g-ilin~srg~~vd~~aL~~aL~~~~i~gaglD-v~~~EP~~~~~L~~~~~nviltPh~ 285 (333)
T 2d0i_A 220 EER-VKKLEGK-YLVNIGRGALVDEKAVTEAIKQGKLKGYATD-VFEKEPVREHELFKYEWETVLTPHY 285 (333)
T ss_dssp HHH-HHHTBTC-EEEECSCGGGBCHHHHHHHHHTTCBCEEEES-CCSSSSCSCCGGGGCTTTEEECCSC
T ss_pred HHH-HhhCCCC-EEEECCCCcccCHHHHHHHHHcCCceEEEec-CCCCCCCCCchHHcCCCCEEEcCcc
Confidence 2 2 1357889 99999865433333344444332 2233433 444332 12345555 56776653
No 107
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=99.22 E-value=3.6e-11 Score=112.16 Aligned_cols=134 Identities=16% Similarity=0.181 Sum_probs=90.3
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCchh-HHHHHh
Q 044593 28 KSTSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILS-TQSVLK 106 (335)
Q Consensus 28 ~~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~-~~~vl~ 106 (335)
...+++|||||+|.||+++|+.++..|++|++|||+++ .. +.....++++++ .+||+|++++|... +..++.
T Consensus 121 ~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~dr~~~-~~-----~~~~~~~l~ell-~~aDvV~l~~P~~~~t~~~i~ 193 (303)
T 1qp8_A 121 LIQGEKVAVLGLGEIGTRVGKILAALGAQVRGFSRTPK-EG-----PWRFTNSLEEAL-REARAAVCALPLNKHTRGLVK 193 (303)
T ss_dssp CCTTCEEEEESCSTHHHHHHHHHHHTTCEEEEECSSCC-CS-----SSCCBSCSHHHH-TTCSEEEECCCCSTTTTTCBC
T ss_pred CCCCCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcc-cc-----CcccCCCHHHHH-hhCCEEEEeCcCchHHHHHhC
Confidence 45688999999999999999999999999999999876 11 444455778887 89999999999874 555553
Q ss_pred -hccccccCCccEEEEcCCCCchHHHHHHhhCCCC-CceEeccccC---CCCC-cccccCCCcceecccc
Q 044593 107 -SIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQD-FDILCTHPMF---GPES-AKSSWENLPFMYDKVR 170 (335)
Q Consensus 107 -~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~~-~~~v~~HPma---G~~~-~~~~~~g~~~i~~~~~ 170 (335)
+. ...++++++++|+++......+.+.+.+..+ ....+. -.+ +|.. ....|....++++|..
T Consensus 194 ~~~-l~~mk~gailin~srg~~vd~~aL~~aL~~g~i~gA~l-Dv~~~~ep~~~~~~L~~~~nviltPH~ 261 (303)
T 1qp8_A 194 YQH-LALMAEDAVFVNVGRAEVLDRDGVLRILKERPQFIFAS-DVWWGRNDFAKDAEFFSLPNVVATPWV 261 (303)
T ss_dssp HHH-HTTSCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEE-SCCTTTTCCGGGHHHHTSTTEEECCSC
T ss_pred HHH-HhhCCCCCEEEECCCCcccCHHHHHHHHHhCCceEEEe-ccCCCCCCCCCCChhhcCCCEEECCCc
Confidence 23 2468899999999886443333444444322 211121 222 2222 1234555667777653
No 108
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=99.22 E-value=3e-11 Score=114.13 Aligned_cols=108 Identities=15% Similarity=0.202 Sum_probs=81.8
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCch-hHHHHHh
Q 044593 28 KSTSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSIL-STQSVLK 106 (335)
Q Consensus 28 ~~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~-~~~~vl~ 106 (335)
...+++|||||+|.||+++|+.++..|++|++||+++.... .+.|+... ++++++ ++||+|++++|.. .+..++.
T Consensus 138 ~l~g~tvgIiG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~--~~~g~~~~-~l~ell-~~aDvV~l~~P~t~~t~~li~ 213 (334)
T 2pi1_A 138 ELNRLTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKREDL--KEKGCVYT-SLDELL-KESDVISLHVPYTKETHHMIN 213 (334)
T ss_dssp CGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHH--HHTTCEEC-CHHHHH-HHCSEEEECCCCCTTTTTCBC
T ss_pred eccCceEEEECcCHHHHHHHHHHHHCcCEEEEECCCcchhh--HhcCceec-CHHHHH-hhCCEEEEeCCCChHHHHhhC
Confidence 45678999999999999999999999999999999986553 24566543 488887 7899999999965 3444432
Q ss_pred hccccccCCccEEEEcCCCCchHHHHHHhhCCC
Q 044593 107 SIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQ 139 (335)
Q Consensus 107 ~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~ 139 (335)
.-....++++++++|++..+....+.+.+.+..
T Consensus 214 ~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~ 246 (334)
T 2pi1_A 214 EERISLMKDGVYLINTARGKVVDTDALYRAYQR 246 (334)
T ss_dssp HHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHT
T ss_pred HHHHhhCCCCcEEEECCCCcccCHHHHHHHHHh
Confidence 111245789999999998766555666666543
No 109
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=99.21 E-value=2.3e-11 Score=112.77 Aligned_cols=168 Identities=13% Similarity=0.121 Sum_probs=108.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCc---eecChhh-HhhcCCCEEEEecCchhHHHHHh
Q 044593 31 SLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAP---FFADLND-LCELHPDVVLLSTSILSTQSVLK 106 (335)
Q Consensus 31 ~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~---~~~~~~~-~~~~~aDvVIlavp~~~~~~vl~ 106 (335)
+|||+|||+|.||+++|..|.++|++|++|+|+++..+.....|.. ...+..+ +. ..+|+||+|||...+.++++
T Consensus 2 ~mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~D~vilavk~~~~~~~l~ 80 (294)
T 3g17_A 2 SLSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHAKTITYYTVPHAPAQDIVVKGYEDVT-NTFDVIIIAVKTHQLDAVIP 80 (294)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSCEEEEEESSTTSCCEEEEEEEGGGCC-SCEEEEEECSCGGGHHHHGG
T ss_pred CcEEEEECCCHHHHHHHHHHHHCCCeEEEEEeccCcEEEEecCCeeccceecCchHhcC-CCCCEEEEeCCccCHHHHHH
Confidence 4799999999999999999999999999999997654422333431 1223333 23 57999999999999999999
Q ss_pred hccccccCCccEEEEcCCCCchHHHHHHhhCCCCCceEeccccCCCCC-ccccc-CCCcceecccccCCChhHHHHHHHH
Q 044593 107 SIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQDFDILCTHPMFGPES-AKSSW-ENLPFMYDKVRIGNDEERIKRVDKF 184 (335)
Q Consensus 107 ~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~~~~~v~~HPmaG~~~-~~~~~-~g~~~i~~~~~~~~~~~~~~~~~~v 184 (335)
++. +.++++++|+.+...-... +.++.. +++++-+..+... ++... .+ +.-+ .++. .+..+.+
T Consensus 81 ~l~-~~l~~~~~iv~~~nGi~~~-----~~~~~~-~v~~g~~~~~a~~~~pg~v~~~-~~~~---~~~~----~~~~~~l 145 (294)
T 3g17_A 81 HLT-YLAHEDTLIILAQNGYGQL-----EHIPFK-NVCQAVVYISGQKKGDVVTHFR-DYQL---RIQD----NALTRQF 145 (294)
T ss_dssp GHH-HHEEEEEEEEECCSSCCCG-----GGCCCS-CEEECEEEEEEEEETTEEEEEE-EEEE---EEEC----SHHHHHH
T ss_pred HHH-HhhCCCCEEEEeccCcccH-----hhCCCC-cEEEEEEEEEEEEcCCCEEEEC-CCEE---ecCc----cHHHHHH
Confidence 995 6788888888875432221 115532 3443322222211 11000 11 1111 1122 2456788
Q ss_pred HHHHHhcCCEEEEeChHHHHHHHHHhhhhH
Q 044593 185 LDVFAKEGCRMVEMSCFDHDKYAAGSQFVT 214 (335)
Q Consensus 185 ~~l~~~~G~~v~~~~~~eHD~~~A~~s~lp 214 (335)
.++|+..|.+++..+.-....+-+++-..+
T Consensus 146 ~~~l~~~~~~~~~~~di~~~~w~Kl~~N~~ 175 (294)
T 3g17_A 146 RDLVQDSQIDIVLEANIQQAIWYKLLVNLG 175 (294)
T ss_dssp HHHTTTSSCEEEEESSHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCceEEChHHHHHHHHHHHHHHH
Confidence 899999999998888777777777655443
No 110
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=99.21 E-value=1.9e-11 Score=115.35 Aligned_cols=108 Identities=17% Similarity=0.234 Sum_probs=82.8
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCch-hHHHHHh
Q 044593 28 KSTSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSIL-STQSVLK 106 (335)
Q Consensus 28 ~~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~-~~~~vl~ 106 (335)
...+++|||||+|.||+.+|+.++..|++|++|||++...+.+.+.|+.. .++++++ +++|+|++++|.. .+..++.
T Consensus 142 ~l~g~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~-~~l~ell-~~aDvV~l~~P~t~~t~~li~ 219 (330)
T 4e5n_A 142 GLDNATVGFLGMGAIGLAMADRLQGWGATLQYHEAKALDTQTEQRLGLRQ-VACSELF-ASSDFILLALPLNADTLHLVN 219 (330)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHTTTSCCEEEEECSSCCCHHHHHHHTEEE-CCHHHHH-HHCSEEEECCCCSTTTTTCBC
T ss_pred ccCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCCCcHhHHHhcCcee-CCHHHHH-hhCCEEEEcCCCCHHHHHHhC
Confidence 45689999999999999999999999999999999986555566667654 3788887 7899999999965 3444442
Q ss_pred -hccccccCCccEEEEcCCCCchHHHHHHhhCC
Q 044593 107 -SIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLP 138 (335)
Q Consensus 107 -~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~ 138 (335)
+. ...++++++++|++..+....+.+.+.+.
T Consensus 220 ~~~-l~~mk~gailIN~arg~~vd~~aL~~aL~ 251 (330)
T 4e5n_A 220 AEL-LALVRPGALLVNPCRGSVVDEAAVLAALE 251 (330)
T ss_dssp HHH-HTTSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred HHH-HhhCCCCcEEEECCCCchhCHHHHHHHHH
Confidence 22 24578999999998776555555555553
No 111
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=99.20 E-value=1.1e-10 Score=111.35 Aligned_cols=139 Identities=14% Similarity=0.244 Sum_probs=94.6
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCchh-HHHHHh
Q 044593 28 KSTSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILS-TQSVLK 106 (335)
Q Consensus 28 ~~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~-~~~vl~ 106 (335)
...+++|||||+|.||+.+|+.++..|++|++||++.. .+.+.+.|+.. .++++++ +++|+|++++|... +..++.
T Consensus 173 ~l~gktvGIIGlG~IG~~vA~~l~~fG~~V~~~d~~~~-~~~~~~~g~~~-~~l~ell-~~aDvV~l~~Plt~~T~~li~ 249 (365)
T 4hy3_A 173 LIAGSEIGIVGFGDLGKALRRVLSGFRARIRVFDPWLP-RSMLEENGVEP-ASLEDVL-TKSDFIFVVAAVTSENKRFLG 249 (365)
T ss_dssp CSSSSEEEEECCSHHHHHHHHHHTTSCCEEEEECSSSC-HHHHHHTTCEE-CCHHHHH-HSCSEEEECSCSSCC---CCC
T ss_pred ccCCCEEEEecCCcccHHHHHhhhhCCCEEEEECCCCC-HHHHhhcCeee-CCHHHHH-hcCCEEEEcCcCCHHHHhhcC
Confidence 45688999999999999999999999999999999863 34456677754 5788888 89999999999763 444442
Q ss_pred hccccccCCccEEEEcCCCCchHHHHHHhhCCCCCceEeccccCCCCCc---ccccCCCcceecccc
Q 044593 107 SIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQDFDILCTHPMFGPESA---KSSWENLPFMYDKVR 170 (335)
Q Consensus 107 ~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~~~~~v~~HPmaG~~~~---~~~~~g~~~i~~~~~ 170 (335)
.-....++++++++|++.......+.+.+.+..+.-. .+.-.+.+|.- ...|.-..++++|.+
T Consensus 250 ~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~-aaLDV~~~EPl~~~~pL~~~~nvilTPHi 315 (365)
T 4hy3_A 250 AEAFSSMRRGAAFILLSRADVVDFDALMAAVSSGHIV-AASDVYPEEPLPLDHPVRSLKGFIRSAHR 315 (365)
T ss_dssp HHHHHTSCTTCEEEECSCGGGSCHHHHHHHHHTTSSE-EEESCCSSSSCCTTCGGGTCTTEEECCSC
T ss_pred HHHHhcCCCCcEEEECcCCchhCHHHHHHHHHcCCce-EEeeCCCCCCCCCCChhhcCCCEEECCcc
Confidence 2112457899999999877655556666555443212 33455554431 123444456666654
No 112
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=99.19 E-value=3.2e-11 Score=114.05 Aligned_cols=137 Identities=22% Similarity=0.308 Sum_probs=93.0
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCchh-HHHHHh
Q 044593 28 KSTSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILS-TQSVLK 106 (335)
Q Consensus 28 ~~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~-~~~vl~ 106 (335)
...+++|+|||+|.||..+|..|+..|++|++||++++. +.+.+.|+.. .++++++ .++|+|++|+|... +..++.
T Consensus 147 ~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~-~~l~~~l-~~aDvVil~vp~~~~t~~~i~ 223 (334)
T 2dbq_A 147 DVYGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRKE-EVERELNAEF-KPLEDLL-RESDFVVLAVPLTRETYHLIN 223 (334)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHHHCCEE-CCHHHHH-HHCSEEEECCCCCTTTTTCBC
T ss_pred CCCCCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcch-hhHhhcCccc-CCHHHHH-hhCCEEEECCCCChHHHHhhC
Confidence 456789999999999999999999999999999999876 4455567654 4777877 78999999999876 444552
Q ss_pred -hccccccCCccEEEEcCCCCchHHHHHHhhCCC-CCceEeccccCCCCCc--ccccCCCcceeccc
Q 044593 107 -SIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQ-DFDILCTHPMFGPESA--KSSWENLPFMYDKV 169 (335)
Q Consensus 107 -~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~-~~~~v~~HPmaG~~~~--~~~~~g~~~i~~~~ 169 (335)
++ .+.++++++++|++.......+.+.+.+.. .....+.+ .+++|.. ...|....++++|.
T Consensus 224 ~~~-~~~mk~~ailIn~srg~~v~~~aL~~aL~~~~i~ga~lD-v~~~EP~~~~~L~~~~~vi~tPh 288 (334)
T 2dbq_A 224 EER-LKLMKKTAILINIARGKVVDTNALVKALKEGWIAGAGLD-VFEEEPYYNEELFKLDNVVLTPH 288 (334)
T ss_dssp HHH-HHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEES-CCSSSSCCCHHHHHCTTEEECSS
T ss_pred HHH-HhcCCCCcEEEECCCCcccCHHHHHHHHHhCCeeEEEec-CCCCCCCCCchhhcCCCEEECCc
Confidence 33 245789999999986543333344444432 22233444 4454421 12344445666654
No 113
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=99.18 E-value=8.2e-11 Score=113.05 Aligned_cols=207 Identities=12% Similarity=0.091 Sum_probs=129.2
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCC--------eEEEEcCCCCc-----HHHHHhC--------C------CceecCh
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHH--------TLLVHSRSDHS-----PAVRQQL--------N------APFFADL 81 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~--------~V~~~dr~~~~-----~~~a~~~--------g------~~~~~~~ 81 (335)
.+..||+|||.|.+|+++|..|.++|+ +|.+|.|+++. .+..... | +..++|+
T Consensus 32 ~~p~KI~ViGaGsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp~~i~~t~dl 111 (391)
T 4fgw_A 32 EKPFKVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLPDNLVANPDL 111 (391)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCCSSEEEESCH
T ss_pred CCCCeEEEECcCHHHHHHHHHHHHcCCCccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCCCCcEEeCCH
Confidence 345699999999999999999999874 59999988753 2222211 2 2356788
Q ss_pred hhHhhcCCCEEEEecCchhHHHHHhhccccccCCccEEEEcCC-----CC--chHHHHHHhhCCCCCceEeccccCCCCC
Q 044593 82 NDLCELHPDVVLLSTSILSTQSVLKSIPFQRLKRSTLFVDVLS-----VK--EFPRNLFLKYLPQDFDILCTHPMFGPES 154 (335)
Q Consensus 82 ~~~~~~~aDvVIlavp~~~~~~vl~~l~~~~l~~~~iVvd~~S-----vK--~~~~~~l~~~l~~~~~~v~~HPmaG~~~ 154 (335)
.+++ +++|+||+++|...+.++++++. +.++++..|+.++= .+ ..+.+.+.+.++. ++. -+.||.+
T Consensus 112 ~~al-~~ad~ii~avPs~~~r~~l~~l~-~~~~~~~~iv~~~KGie~~~~~~~~~se~i~e~~~~--~~~---vLsGPs~ 184 (391)
T 4fgw_A 112 IDSV-KDVDIIVFNIPHQFLPRICSQLK-GHVDSHVRAISCLKGFEVGAKGVQLLSSYITEELGI--QCG---ALSGANI 184 (391)
T ss_dssp HHHH-TTCSEEEECSCGGGHHHHHHHHT-TTSCTTCEEEECCCSCEEETTEEECHHHHHHHHHCC--EEE---EEECSCC
T ss_pred HHHH-hcCCEEEEECChhhhHHHHHHhc-cccCCCceeEEeccccccccccchhHHHHHHHHhCc--cce---eccCCch
Confidence 8887 89999999999999999999995 68889988887741 11 1234555555542 221 3568887
Q ss_pred cccccCCCcceecccccCCC-----hhHHHHHHHHHHHHHhcCCEEEEeChHHHHHHHHHhhhhHHHHHHH--HH-HcCC
Q 044593 155 AKSSWENLPFMYDKVRIGND-----EERIKRVDKFLDVFAKEGCRMVEMSCFDHDKYAAGSQFVTHTMGRV--LE-RFGV 226 (335)
Q Consensus 155 ~~~~~~g~~~i~~~~~~~~~-----~~~~~~~~~v~~l~~~~G~~v~~~~~~eHD~~~A~~s~lph~la~a--L~-~~~~ 226 (335)
+.+...+.|..++-+ +... ..+....+.++++|..--++++..+.---=++.+ .+--++|.+ +. .++.
T Consensus 185 A~EVa~~~pta~~iA-~~~~~~~~~~~~~~~a~~~~~lf~~~~frvy~s~DviGvElgG---AlKNViAIAaGi~dGlg~ 260 (391)
T 4fgw_A 185 ATEVAQEHWSETTVA-YHIPKDFRGEGKDVDHKVLKALFHRPYFHVSVIEDVAGISICG---ALKNVVALGCGFVEGLGW 260 (391)
T ss_dssp HHHHHTTCCEEEEEE-CCCCTTCCCSSSSCCHHHHHHHHCBTTEEEEEESCHHHHHHHH---HHHHHHHHHHHHHHHTTC
T ss_pred HHHhhcCCCceEEEE-ecChhhhhhhhHHHHHHHHHHHhCCCCEEEEEeCCccceehHH---HHHHHHHHHHHHHhcCCC
Confidence 766667776654311 0000 0011123668889998889988886332222222 222223222 11 1111
Q ss_pred CC---CCCCCcchhhHHHHHHHh
Q 044593 227 ES---SPINTKGYETLLDLVDNT 246 (335)
Q Consensus 227 ~~---~~~~~~gf~~~~rl~~~i 246 (335)
.. ..+-+.|+..+.|+...+
T Consensus 261 G~NakAALitrGl~Em~rlg~al 283 (391)
T 4fgw_A 261 GNNASAAIQRVGLGEIIRFGQMF 283 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHH
Confidence 11 124467888898887664
No 114
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=99.18 E-value=1e-10 Score=115.61 Aligned_cols=176 Identities=10% Similarity=0.011 Sum_probs=111.4
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCchhH-H-HHHh
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILST-Q-SVLK 106 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~~-~-~vl~ 106 (335)
..+++|+|||+|.||..+|+.++..|++|+++|+++...+.+.+.|+.. .++++++ .++|+||.|++...+ . +.+
T Consensus 272 l~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~Ga~~-~~l~e~l-~~aDvVi~atgt~~~i~~~~l- 348 (494)
T 3ce6_A 272 IGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMMEGFDV-VTVEEAI-GDADIVVTATGNKDIIMLEHI- 348 (494)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE-CCHHHHG-GGCSEEEECSSSSCSBCHHHH-
T ss_pred CCcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCEE-ecHHHHH-hCCCEEEECCCCHHHHHHHHH-
Confidence 4678999999999999999999999999999999988777788888853 4667777 789999999986652 1 222
Q ss_pred hccccccCCccEEEEcCCCCc-hHHHHHHh-hCCCCCceEec-----cccCCCCCcccccCCCcceecccccCCCh----
Q 044593 107 SIPFQRLKRSTLFVDVLSVKE-FPRNLFLK-YLPQDFDILCT-----HPMFGPESAKSSWENLPFMYDKVRIGNDE---- 175 (335)
Q Consensus 107 ~l~~~~l~~~~iVvd~~SvK~-~~~~~l~~-~l~~~~~~v~~-----HPmaG~~~~~~~~~g~~~i~~~~~~~~~~---- 175 (335)
..++++.+|++++..+. .....+.. .+.. ..+.+. .|-++... .....|....+.+ ..+...
T Consensus 349 ----~~mk~ggilvnvG~~~~eId~~aL~~~aL~~-~~I~~~ldv~~~~~~~~~l-~LL~~grlvnL~~-~TPH~a~~~~ 421 (494)
T 3ce6_A 349 ----KAMKDHAILGNIGHFDNEIDMAGLERSGATR-VNVKPQVDLWTFGDTGRSI-IVLSEGRLLNLGN-ATGHPSFVMS 421 (494)
T ss_dssp ----HHSCTTCEEEECSSSGGGBCHHHHHHTTCEE-EEEETTEEEEECTTTCCEE-EEEGGGSCHHHHH-SCCSCHHHHH
T ss_pred ----HhcCCCcEEEEeCCCCCccCHHHHHHhhhcc-ceEEEEEEEeecCCcchHH-HHHhCCCEEeccC-CCCCccccch
Confidence 34678999999998765 22344433 2211 011111 11111110 0011222211110 001111
Q ss_pred --hHHHHHHHHHHHHH--hcCCEEEEeChHHHHHHHHHhhhhHHH
Q 044593 176 --ERIKRVDKFLDVFA--KEGCRMVEMSCFDHDKYAAGSQFVTHT 216 (335)
Q Consensus 176 --~~~~~~~~v~~l~~--~~G~~v~~~~~~eHD~~~A~~s~lph~ 216 (335)
-..+..+.+..+++ .++.. +++.|++||+.+|.+ ||||+
T Consensus 422 ~s~~~qa~~ai~~~~~g~~~~~~-V~~~P~~~De~vA~l-hL~~l 464 (494)
T 3ce6_A 422 NSFANQTIAQIELWTKNDEYDNE-VYRLPKHLDEKVARI-HVEAL 464 (494)
T ss_dssp HHHHHHHHHHHHHHHTGGGCCSS-EECCCHHHHHHHHHH-HHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCCCCE-EEECHHHHHHHHHHh-hHHHH
Confidence 11234455555555 46655 478999999999998 99997
No 115
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=99.16 E-value=4.9e-11 Score=113.99 Aligned_cols=110 Identities=15% Similarity=0.208 Sum_probs=84.9
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCe-EEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCch-hHHHHH
Q 044593 28 KSTSLKIAVIGFGNFGQFLAKAFARHHHT-LLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSIL-STQSVL 105 (335)
Q Consensus 28 ~~~~~kI~IIG~G~mG~siA~~L~~~G~~-V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~-~~~~vl 105 (335)
...+++|||||+|.||..+|+.++..|++ |++||+++...+.+.+.|+....++++++ .++|+|++++|.. .+..++
T Consensus 161 ~l~g~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell-~~aDvV~l~~P~t~~t~~li 239 (364)
T 2j6i_A 161 DIEGKTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKDAEEKVGARRVENIEELV-AQADIVTVNAPLHAGTKGLI 239 (364)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHTTEEECSSHHHHH-HTCSEEEECCCCSTTTTTCB
T ss_pred cCCCCEEEEECcCHHHHHHHHHHHhCCCcEEEEECCCccchhHHHhcCcEecCCHHHHH-hcCCEEEECCCCChHHHHHh
Confidence 45788999999999999999999999997 99999998776667778877666788888 7999999999986 344444
Q ss_pred hhccccccCCccEEEEcCCCCchHHHHHHhhCC
Q 044593 106 KSIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLP 138 (335)
Q Consensus 106 ~~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~ 138 (335)
.+-....++++++++|++.......+.+.+.+.
T Consensus 240 ~~~~l~~mk~ga~lIn~arG~~vd~~aL~~aL~ 272 (364)
T 2j6i_A 240 NKELLSKFKKGAWLVNTARGAICVAEDVAAALE 272 (364)
T ss_dssp CHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred CHHHHhhCCCCCEEEECCCCchhCHHHHHHHHH
Confidence 321124578999999998765444455554443
No 116
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=99.16 E-value=1.6e-10 Score=111.81 Aligned_cols=122 Identities=17% Similarity=0.215 Sum_probs=85.6
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCchh-HHHHHh
Q 044593 28 KSTSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILS-TQSVLK 106 (335)
Q Consensus 28 ~~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~-~~~vl~ 106 (335)
...+++|||||+|.||+.+|+.+...|++|++||+++.... .+.....++++++ ++||+|++++|... +..++.
T Consensus 153 el~gktvGIIGlG~IG~~vA~~l~~~G~~V~~yd~~~~~~~----~~~~~~~sl~ell-~~aDvV~lhvPlt~~T~~li~ 227 (416)
T 3k5p_A 153 EVRGKTLGIVGYGNIGSQVGNLAESLGMTVRYYDTSDKLQY----GNVKPAASLDELL-KTSDVVSLHVPSSKSTSKLIT 227 (416)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCCCCB----TTBEECSSHHHHH-HHCSEEEECCCC-----CCBC
T ss_pred cCCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCcchhcc----cCcEecCCHHHHH-hhCCEEEEeCCCCHHHhhhcC
Confidence 45688999999999999999999999999999999864321 1334456788888 89999999999754 444442
Q ss_pred hccccccCCccEEEEcCCCCchHHHHHHhhCCCCCceEeccccCCCCC
Q 044593 107 SIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQDFDILCTHPMFGPES 154 (335)
Q Consensus 107 ~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~~~~~v~~HPmaG~~~ 154 (335)
.-....+++|++++|++.......+++.+.+..+.-.-.+..+|..|.
T Consensus 228 ~~~l~~mk~gailIN~aRG~vvd~~aL~~aL~~g~i~gAalDVf~~EP 275 (416)
T 3k5p_A 228 EAKLRKMKKGAFLINNARGSDVDLEALAKVLQEGHLAGAAIDVFPVEP 275 (416)
T ss_dssp HHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTTSEEEEEECCCSSCC
T ss_pred HHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcCCccEEEeCCCCCCC
Confidence 111235789999999987766655666666654432223445665553
No 117
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=99.14 E-value=1e-10 Score=112.94 Aligned_cols=95 Identities=18% Similarity=0.156 Sum_probs=75.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHH-cCCeEEEEc---CCCCcHHHH-HhCC------------C------c-eecChhhHhh
Q 044593 31 SLKIAVIGFGNFGQFLAKAFAR-HHHTLLVHS---RSDHSPAVR-QQLN------------A------P-FFADLNDLCE 86 (335)
Q Consensus 31 ~~kI~IIG~G~mG~siA~~L~~-~G~~V~~~d---r~~~~~~~a-~~~g------------~------~-~~~~~~~~~~ 86 (335)
+|||+|||+|.||+.+|..|++ +|++|++|| |+++..+.+ .+.| . . .++++.+++
T Consensus 2 ~mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~- 80 (404)
T 3c7a_A 2 TVKVCVCGGGNGAHTLSGLAASRDGVEVRVLTLFADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVITKDPEIAI- 80 (404)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSTTEEEEEECCSTTHHHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEESCHHHHH-
T ss_pred CceEEEECCCHHHHHHHHHHHhCCCCEEEEEeCCCCcHHHHHHHHhhccceeeeecCCCccceeeccceEEeCCHHHHh-
Confidence 4799999999999999999988 599999999 665555442 3222 1 1 345666666
Q ss_pred cCCCEEEEecCchhHHHHHhhccccccCCccEEEEcCCCCc
Q 044593 87 LHPDVVLLSTSILSTQSVLKSIPFQRLKRSTLFVDVLSVKE 127 (335)
Q Consensus 87 ~~aDvVIlavp~~~~~~vl~~l~~~~l~~~~iVvd~~SvK~ 127 (335)
.++|+||+|||.....++++++. +.++++++|+++.+.++
T Consensus 81 ~~aD~Vilav~~~~~~~v~~~l~-~~l~~~~ivv~~~~~~G 120 (404)
T 3c7a_A 81 SGADVVILTVPAFAHEGYFQAMA-PYVQDSALIVGLPSQAG 120 (404)
T ss_dssp TTCSEEEECSCGGGHHHHHHHHT-TTCCTTCEEEETTCCTT
T ss_pred CCCCEEEEeCchHHHHHHHHHHH-hhCCCCcEEEEcCCCcc
Confidence 78999999999999999999995 67888999998765565
No 118
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=99.14 E-value=1.2e-10 Score=112.58 Aligned_cols=137 Identities=18% Similarity=0.179 Sum_probs=89.6
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCchh-HHHHHh
Q 044593 28 KSTSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILS-TQSVLK 106 (335)
Q Consensus 28 ~~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~-~~~vl~ 106 (335)
...+++|||||+|.||+.+|+.++..|++|++||+++.... .++....++++++ ++||+|++++|... +..++.
T Consensus 142 el~gktlGiIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~----~~~~~~~~l~ell-~~aDvV~l~~P~t~~t~~li~ 216 (404)
T 1sc6_A 142 EARGKKLGIIGYGHIGTQLGILAESLGMYVYFYDIENKLPL----GNATQVQHLSDLL-NMSDVVSLHVPENPSTKNMMG 216 (404)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCCC----TTCEECSCHHHHH-HHCSEEEECCCSSTTTTTCBC
T ss_pred ccCCCEEEEEeECHHHHHHHHHHHHCCCEEEEEcCCchhcc----CCceecCCHHHHH-hcCCEEEEccCCChHHHHHhh
Confidence 45788999999999999999999999999999999865321 1244455788888 78999999999863 444442
Q ss_pred h-ccccccCCccEEEEcCCCCchHHHHHHhhCCCC------CceEeccccCCCCCc-ccccCCCcceecccc
Q 044593 107 S-IPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQD------FDILCTHPMFGPESA-KSSWENLPFMYDKVR 170 (335)
Q Consensus 107 ~-l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~~------~~~v~~HPmaG~~~~-~~~~~g~~~i~~~~~ 170 (335)
. . ...+++|++++|++.....-.+.+.+.+..+ ..+...+|+.+.+.. ...|....++++|.+
T Consensus 217 ~~~-l~~mk~ga~lIN~aRg~~vd~~aL~~aL~~g~i~gA~lDVf~~EP~~~~~~~~~pL~~~~nvilTPHi 287 (404)
T 1sc6_A 217 AKE-ISLMKPGSLLINASRGTVVDIPALADALASKHLAGAAIDVFPTEPATNSDPFTSPLAEFDNVLLTPHI 287 (404)
T ss_dssp HHH-HHHSCTTEEEEECSCSSSBCHHHHHHHHHTTSEEEEEEEC---------CTTTGGGTTCTTEEEECCC
T ss_pred HHH-HhhcCCCeEEEECCCChHHhHHHHHHHHHcCCccEEEEeecCCCCCCccccccchhhcCCCEEECCCC
Confidence 1 2 2457899999999877644445555554332 245667787654311 134555566777754
No 119
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=99.12 E-value=7.9e-11 Score=108.24 Aligned_cols=117 Identities=14% Similarity=0.194 Sum_probs=84.9
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHH-HHHhCCCceecChhhHhhcCCCEEEEecCchhHHHHHhhc
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPA-VRQQLNAPFFADLNDLCELHPDVVLLSTSILSTQSVLKSI 108 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~-~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~~~~vl~~l 108 (335)
..++|+|||+|.||.+++..|.+.|++|+++||+++..+ .+.+.|+....++.+.+ .++|+||+|||......+...+
T Consensus 128 ~~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~g~~~~~~~~~~~-~~aDiVi~atp~~~~~~~~~~i 206 (275)
T 2hk9_A 128 KEKSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPLEVVNSPEEVI-DKVQVIVNTTSVGLKDEDPEIF 206 (275)
T ss_dssp GGSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTSCEEECSCGGGTG-GGCSEEEECSSTTSSTTCCCSS
T ss_pred CCCEEEEECchHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHcCCeeehhHHhhh-cCCCEEEEeCCCCCCCCCCCCC
Confidence 467999999999999999999999999999999976543 33445655554666766 7899999999988643221223
Q ss_pred cccccCCccEEEEcCCCCchHHHHHHhhCCCCCceEeccccC
Q 044593 109 PFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQDFDILCTHPMF 150 (335)
Q Consensus 109 ~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~~~~~v~~HPma 150 (335)
....++++++|+|++..++...+..++ .+..++.++||.
T Consensus 207 ~~~~l~~g~~viDv~~~~t~ll~~a~~---~g~~~v~g~~ml 245 (275)
T 2hk9_A 207 NYDLIKKDHVVVDIIYKETKLLKKAKE---KGAKLLDGLPML 245 (275)
T ss_dssp CGGGCCTTSEEEESSSSCCHHHHHHHH---TTCEEECSHHHH
T ss_pred CHHHcCCCCEEEEcCCChHHHHHHHHH---CcCEEECCHHHH
Confidence 224578899999998844444444443 356777777766
No 120
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=99.02 E-value=2.4e-10 Score=108.25 Aligned_cols=105 Identities=16% Similarity=0.316 Sum_probs=77.7
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCchh-HHHHHh
Q 044593 28 KSTSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILS-TQSVLK 106 (335)
Q Consensus 28 ~~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~-~~~vl~ 106 (335)
...+++|||||+|.||+++|+.++..|++|++||+++... .+.++. ..++++++ .+||+|++++|... +..++.
T Consensus 145 ~l~gktvgIiGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~---~~~~~~-~~~l~ell-~~aDvV~l~~Plt~~t~~li~ 219 (343)
T 2yq5_A 145 EIYNLTVGLIGVGHIGSAVAEIFSAMGAKVIAYDVAYNPE---FEPFLT-YTDFDTVL-KEADIVSLHTPLFPSTENMIG 219 (343)
T ss_dssp CGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCGG---GTTTCE-ECCHHHHH-HHCSEEEECCCCCTTTTTCBC
T ss_pred ccCCCeEEEEecCHHHHHHHHHHhhCCCEEEEECCChhhh---hhcccc-ccCHHHHH-hcCCEEEEcCCCCHHHHHHhh
Confidence 4467899999999999999999999999999999998642 122333 34788888 79999999999642 333332
Q ss_pred hccccccCCccEEEEcCCCCchHHHHHHhhC
Q 044593 107 SIPFQRLKRSTLFVDVLSVKEFPRNLFLKYL 137 (335)
Q Consensus 107 ~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l 137 (335)
.-....++++++++|++..+....+.+.+.+
T Consensus 220 ~~~l~~mk~gailIN~aRg~~vd~~aL~~aL 250 (343)
T 2yq5_A 220 EKQLKEMKKSAYLINCARGELVDTGALIKAL 250 (343)
T ss_dssp HHHHHHSCTTCEEEECSCGGGBCHHHHHHHH
T ss_pred HHHHhhCCCCcEEEECCCChhhhHHHHHHHH
Confidence 1112357899999999987655555555554
No 121
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=99.01 E-value=4.1e-09 Score=102.73 Aligned_cols=174 Identities=14% Similarity=0.135 Sum_probs=107.2
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHh-------------------CC-CceecChhhHhhcCC
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQ-------------------LN-APFFADLNDLCELHP 89 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~-------------------~g-~~~~~~~~~~~~~~a 89 (335)
.+.+|+|||+|.+|..+|..|++.||+|+++|.|++..+...+ .| +..+++..+.+ .++
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~tt~~~~ai-~~a 98 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLSFAESAEEAV-AAT 98 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEECSSHHHHH-HTS
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeEEcCHHHHH-hcC
Confidence 4679999999999999999999999999999999876653322 11 23456677766 789
Q ss_pred CEEEEecCch----------hHHHHHhhccccccC---CccEEEEcCCCCchHH-----HHHHhhCCCCC-ceEeccccC
Q 044593 90 DVVLLSTSIL----------STQSVLKSIPFQRLK---RSTLFVDVLSVKEFPR-----NLFLKYLPQDF-DILCTHPMF 150 (335)
Q Consensus 90 DvVIlavp~~----------~~~~vl~~l~~~~l~---~~~iVvd~~SvK~~~~-----~~l~~~l~~~~-~~v~~HPma 150 (335)
|++|+|||.. .+..+.+.+. +.++ ++++|+.-|++..... ..+++.. .+. .+++..|-+
T Consensus 99 d~~~I~VpTP~~~d~~~Dl~~v~~a~~~I~-~~l~~~~~g~lVV~eSTVppGtte~~~~~~l~~~~-~~~~f~v~~~PEr 176 (444)
T 3vtf_A 99 DATFIAVGTPPAPDGSADLRYVEAAARAVG-RGIRAKGRWHLVVVKSTVPPGTTEGLVARAVAEEA-GGVKFSVASNPEF 176 (444)
T ss_dssp SEEEECCCCCBCTTSSBCCHHHHHHHHHHH-HHHHHHCSCCEEEECSCCCTTTTTTHHHHHHHTTT-TTCCCEEEECCCC
T ss_pred CceEEEecCCCCCCCCCCcHHHHHHHHHHH-HHHhhcCCCeEEEEeCCCCCchHHHHHHHHHHHhC-CCCCceeecCccc
Confidence 9999999752 3566666664 4453 5778888776654332 2233222 222 245544544
Q ss_pred CCCCcc-cccCCCcceecccccCCChhHHHHHHHHHHHHHhcCCEEEEeChHHHHHHHHHhhhh
Q 044593 151 GPESAK-SSWENLPFMYDKVRIGNDEERIKRVDKFLDVFAKEGCRMVEMSCFDHDKYAAGSQFV 213 (335)
Q Consensus 151 G~~~~~-~~~~g~~~i~~~~~~~~~~~~~~~~~~v~~l~~~~G~~v~~~~~~eHD~~~A~~s~l 213 (335)
-.+-.. ..+...+-++ +|.. ++...+.+.++++.+...++.+++.. -+++.+..+.
T Consensus 177 l~eG~a~~d~~~~~riV----iG~~--~~~a~~~~~~ly~~~~~~~~~~~~~~-AE~~Kl~eN~ 233 (444)
T 3vtf_A 177 LREGSALEDFFKPDRIV----IGAG--DERAASFLLDVYKAVDAPKLVMKPRE-AELVKYASNV 233 (444)
T ss_dssp CCTTSHHHHHHSCSCEE----EEES--SHHHHHHHHHHTTTSCSCEEEECHHH-HHHHHHHHHH
T ss_pred ccCCccccccccCCcEE----EcCC--CHHHHHHHHHHHhccCCCEEEechhH-HHHHHHHHHH
Confidence 332110 0001111111 2322 23456778889999888788888764 3455554433
No 122
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=98.98 E-value=4.7e-10 Score=105.93 Aligned_cols=107 Identities=14% Similarity=0.252 Sum_probs=78.9
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCchh-HHHHHh
Q 044593 28 KSTSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILS-TQSVLK 106 (335)
Q Consensus 28 ~~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~-~~~vl~ 106 (335)
...+++|||||+|.||..+|+.++..|++|++||++++.. +.+ .+....++++++ .++|+|++++|... +..++.
T Consensus 143 ~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~~~-~~~~~~~l~ell-~~aDvV~l~~p~~~~t~~li~ 218 (333)
T 1j4a_A 143 EVRDQVVGVVGTGHIGQVFMQIMEGFGAKVITYDIFRNPE--LEK-KGYYVDSLDDLY-KQADVISLHVPDVPANVHMIN 218 (333)
T ss_dssp CGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHH--HHH-TTCBCSCHHHHH-HHCSEEEECSCCCGGGTTCBS
T ss_pred cCCCCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcchh--HHh-hCeecCCHHHHH-hhCCEEEEcCCCcHHHHHHHh
Confidence 3457899999999999999999999999999999998654 223 244444788887 78999999999764 444442
Q ss_pred hccccccCCccEEEEcCCCCchHHHHHHhhCC
Q 044593 107 SIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLP 138 (335)
Q Consensus 107 ~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~ 138 (335)
.-....++++++++|++.......+.+.+.+.
T Consensus 219 ~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~ 250 (333)
T 1j4a_A 219 DESIAKMKQDVVIVNVSRGPLVDTDAVIRGLD 250 (333)
T ss_dssp HHHHHHSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred HHHHhhCCCCcEEEECCCCcccCHHHHHHHHH
Confidence 11123578999999998765544455555553
No 123
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=98.94 E-value=4.5e-09 Score=86.69 Aligned_cols=105 Identities=15% Similarity=0.147 Sum_probs=80.4
Q ss_pred CCCeEEEEcc----cHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCchhHHHHH
Q 044593 30 TSLKIAVIGF----GNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILSTQSVL 105 (335)
Q Consensus 30 ~~~kI~IIG~----G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~~~~vl 105 (335)
+..+|+|||+ |.||..+++.|.+.|++|+.++++.+.. .|...+.++.++. +.+|++++++|.....+++
T Consensus 13 ~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~i-----~G~~~~~s~~el~-~~vDlvii~vp~~~v~~v~ 86 (138)
T 1y81_A 13 EFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEI-----EGLKCYRSVRELP-KDVDVIVFVVPPKVGLQVA 86 (138)
T ss_dssp -CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE-----TTEECBSSGGGSC-TTCCEEEECSCHHHHHHHH
T ss_pred CCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCeE-----CCeeecCCHHHhC-CCCCEEEEEeCHHHHHHHH
Confidence 4678999999 9999999999999999977777765333 4777788888887 7899999999998889999
Q ss_pred hhccccccCCccEEEEcCCCCchHHHHHHhhCCCCCceEe
Q 044593 106 KSIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQDFDILC 145 (335)
Q Consensus 106 ~~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~~~~~v~ 145 (335)
+++. . ...+.+|++.++......+..++ .+.++++
T Consensus 87 ~~~~-~-~g~~~i~~~~~~~~~~l~~~a~~---~Gi~~ig 121 (138)
T 1y81_A 87 KEAV-E-AGFKKLWFQPGAESEEIRRFLEK---AGVEYSF 121 (138)
T ss_dssp HHHH-H-TTCCEEEECTTSCCHHHHHHHHH---HTCEEEC
T ss_pred HHHH-H-cCCCEEEEcCccHHHHHHHHHHH---CCCEEEc
Confidence 8774 2 45667888887664444444433 3566765
No 124
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=98.92 E-value=1.1e-09 Score=103.49 Aligned_cols=106 Identities=16% Similarity=0.254 Sum_probs=78.9
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCchh-HHHHHh
Q 044593 28 KSTSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILS-TQSVLK 106 (335)
Q Consensus 28 ~~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~-~~~vl~ 106 (335)
...+++|||||+|.||..+|+.++..|++|++||+++... + +.++ ...++++++ .++|+|++++|... +..++.
T Consensus 142 ~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~-~~~~-~~~~l~ell-~~aDvV~~~~P~~~~t~~li~ 216 (333)
T 1dxy_A 142 ELGQQTVGVMGTGHIGQVAIKLFKGFGAKVIAYDPYPMKG--D-HPDF-DYVSLEDLF-KQSDVIDLHVPGIEQNTHIIN 216 (333)
T ss_dssp CGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSS--C-CTTC-EECCHHHHH-HHCSEEEECCCCCGGGTTSBC
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCcchh--h-Hhcc-ccCCHHHHH-hcCCEEEEcCCCchhHHHHhC
Confidence 3457899999999999999999999999999999987543 1 1122 234788887 78999999999765 444442
Q ss_pred -hccccccCCccEEEEcCCCCchHHHHHHhhCCC
Q 044593 107 -SIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQ 139 (335)
Q Consensus 107 -~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~ 139 (335)
+. ...++++++++|+++......+.+.+.+..
T Consensus 217 ~~~-l~~mk~ga~lIn~srg~~vd~~aL~~aL~~ 249 (333)
T 1dxy_A 217 EAA-FNLMKPGAIVINTARPNLIDTQAMLSNLKS 249 (333)
T ss_dssp HHH-HHHSCTTEEEEECSCTTSBCHHHHHHHHHT
T ss_pred HHH-HhhCCCCcEEEECCCCcccCHHHHHHHHHh
Confidence 22 235789999999988765555666665543
No 125
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=98.90 E-value=1.6e-09 Score=98.66 Aligned_cols=116 Identities=14% Similarity=0.149 Sum_probs=80.0
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcH-HHHHhCCCceecChhhHhhcCCCEEEEecCchhHHHHHhhc
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSP-AVRQQLNAPFFADLNDLCELHPDVVLLSTSILSTQSVLKSI 108 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~-~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~~~~vl~~l 108 (335)
.. +|+|||+|.||.+++..|.+.|++|+++||+++.. +.+.+.|.. ..++.++ .++|+||+|||......+...+
T Consensus 116 ~~-~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~~~-~~~~~~~--~~~Divi~~tp~~~~~~~~~~l 191 (263)
T 2d5c_A 116 KG-PALVLGAGGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFGLR-AVPLEKA--REARLLVNATRVGLEDPSASPL 191 (263)
T ss_dssp CS-CEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHTCE-ECCGGGG--GGCSEEEECSSTTTTCTTCCSS
T ss_pred CC-eEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccc-hhhHhhc--cCCCEEEEccCCCCCCCCCCCC
Confidence 46 99999999999999999999999999999997653 344444554 3455554 5799999999988532111112
Q ss_pred cccccCCccEEEEcCCCCch--HHHHHHhhCCCCCceEeccccCCC
Q 044593 109 PFQRLKRSTLFVDVLSVKEF--PRNLFLKYLPQDFDILCTHPMFGP 152 (335)
Q Consensus 109 ~~~~l~~~~iVvd~~SvK~~--~~~~l~~~l~~~~~~v~~HPmaG~ 152 (335)
....++++++|+|++..... ..+.+++ .+..++.++||...
T Consensus 192 ~~~~l~~g~~viD~~~~p~~t~l~~~a~~---~g~~~v~g~~mlv~ 234 (263)
T 2d5c_A 192 PAELFPEEGAAVDLVYRPLWTRFLREAKA---KGLKVQTGLPMLAW 234 (263)
T ss_dssp CGGGSCSSSEEEESCCSSSSCHHHHHHHH---TTCEEECSHHHHHH
T ss_pred CHHHcCCCCEEEEeecCCcccHHHHHHHH---CcCEEECcHHHHHH
Confidence 12457889999999765332 2333332 35567777776643
No 126
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=98.90 E-value=2.9e-10 Score=106.38 Aligned_cols=94 Identities=12% Similarity=0.181 Sum_probs=72.6
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHc-CC-eEEEEcCCCCcHH-HHHhCC--CceecChhhHhhcCCCEEEEecCchhHH
Q 044593 28 KSTSLKIAVIGFGNFGQFLAKAFARH-HH-TLLVHSRSDHSPA-VRQQLN--APFFADLNDLCELHPDVVLLSTSILSTQ 102 (335)
Q Consensus 28 ~~~~~kI~IIG~G~mG~siA~~L~~~-G~-~V~~~dr~~~~~~-~a~~~g--~~~~~~~~~~~~~~aDvVIlavp~~~~~ 102 (335)
....++|+|||+|.||..++..|.+. |+ +|.+|||+++..+ .+.+.+ +....++.+++ +++|+||+|||.. .
T Consensus 132 ~~~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~e~v-~~aDiVi~atp~~--~ 208 (312)
T 2i99_A 132 PPSSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTVQGEVRVCSSVQEAV-AGADVIITVTLAT--E 208 (312)
T ss_dssp CTTCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSSHHHHHHHHHHSSSCCEECSSHHHHH-TTCSEEEECCCCS--S
T ss_pred CCCCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHhhCCeEEeCCHHHHH-hcCCEEEEEeCCC--C
Confidence 34578999999999999999999886 76 8999999987654 444556 66667888887 7899999999952 2
Q ss_pred HHHhhccccccCCccEEEEcCCCCc
Q 044593 103 SVLKSIPFQRLKRSTLFVDVLSVKE 127 (335)
Q Consensus 103 ~vl~~l~~~~l~~~~iVvd~~SvK~ 127 (335)
.++.. +.+++|++|+|+++.+.
T Consensus 209 ~v~~~---~~l~~g~~vi~~g~~~p 230 (312)
T 2i99_A 209 PILFG---EWVKPGAHINAVGASRP 230 (312)
T ss_dssp CCBCG---GGSCTTCEEEECCCCST
T ss_pred cccCH---HHcCCCcEEEeCCCCCC
Confidence 23321 35789999999976654
No 127
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=98.88 E-value=7e-10 Score=106.15 Aligned_cols=104 Identities=18% Similarity=0.258 Sum_probs=74.7
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCchh-----HHH
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILS-----TQS 103 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~-----~~~ 103 (335)
..+++|||||+|.||+.+|+.++..|++|++||++.... . +.....++++++ ++||+|++++|... +..
T Consensus 117 l~gktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~----~-~~~~~~sl~ell-~~aDiV~l~~Plt~~g~~~T~~ 190 (381)
T 3oet_A 117 LRDRTIGIVGVGNVGSRLQTRLEALGIRTLLCDPPRAAR----G-DEGDFRTLDELV-QEADVLTFHTPLYKDGPYKTLH 190 (381)
T ss_dssp GGGCEEEEECCSHHHHHHHHHHHHTTCEEEEECHHHHHT----T-CCSCBCCHHHHH-HHCSEEEECCCCCCSSTTCCTT
T ss_pred cCCCEEEEEeECHHHHHHHHHHHHCCCEEEEECCChHHh----c-cCcccCCHHHHH-hhCCEEEEcCcCCccccccchh
Confidence 457899999999999999999999999999999853211 1 223356788888 78999999999653 233
Q ss_pred HHhhccccccCCccEEEEcCCCCchHHHHHHhhCC
Q 044593 104 VLKSIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLP 138 (335)
Q Consensus 104 vl~~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~ 138 (335)
++..-....+++|++++|++.......+.+.+.+.
T Consensus 191 li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~ 225 (381)
T 3oet_A 191 LADETLIRRLKPGAILINACRGPVVDNAALLARLN 225 (381)
T ss_dssp SBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred hcCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHH
Confidence 33211123578999999998765444455555554
No 128
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=98.88 E-value=1.7e-09 Score=101.95 Aligned_cols=104 Identities=12% Similarity=0.249 Sum_probs=75.8
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCchh-HHHHHh
Q 044593 28 KSTSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILS-TQSVLK 106 (335)
Q Consensus 28 ~~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~-~~~vl~ 106 (335)
...+++|||||+|.||..+|+.++..|++|++||+++... + +.++ ...++++++ .++|+|++++|... +..++.
T Consensus 143 ~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~-~~~~-~~~~l~ell-~~aDvV~~~~p~t~~t~~li~ 217 (331)
T 1xdw_A 143 EVRNCTVGVVGLGRIGRVAAQIFHGMGATVIGEDVFEIKG--I-EDYC-TQVSLDEVL-EKSDIITIHAPYIKENGAVVT 217 (331)
T ss_dssp CGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCS--C-TTTC-EECCHHHHH-HHCSEEEECCCCCTTTCCSBC
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCccHH--H-Hhcc-ccCCHHHHH-hhCCEEEEecCCchHHHHHhC
Confidence 3457899999999999999999999999999999987543 1 1222 344788887 78999999999753 333332
Q ss_pred -hccccccCCccEEEEcCCCCchHHHHHHhhC
Q 044593 107 -SIPFQRLKRSTLFVDVLSVKEFPRNLFLKYL 137 (335)
Q Consensus 107 -~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l 137 (335)
+. ...++++++++|++.......+.+.+.+
T Consensus 218 ~~~-l~~mk~ga~lin~srg~~vd~~aL~~aL 248 (331)
T 1xdw_A 218 RDF-LKKMKDGAILVNCARGQLVDTEAVIEAV 248 (331)
T ss_dssp HHH-HHTSCTTEEEEECSCGGGBCHHHHHHHH
T ss_pred HHH-HhhCCCCcEEEECCCcccccHHHHHHHH
Confidence 12 1357899999999876544344555444
No 129
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=98.87 E-value=6.4e-10 Score=106.58 Aligned_cols=103 Identities=19% Similarity=0.265 Sum_probs=76.0
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCchh-----HHH
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILS-----TQS 103 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~-----~~~ 103 (335)
..+++|||||+|.||+++|+.|+..|++|++||+++... ..|.. ..++++++ .+||+|++++|... +..
T Consensus 114 l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~----~~g~~-~~~l~ell-~~aDvV~l~~Plt~~g~~~T~~ 187 (380)
T 2o4c_A 114 LAERTYGVVGAGQVGGRLVEVLRGLGWKVLVCDPPRQAR----EPDGE-FVSLERLL-AEADVISLHTPLNRDGEHPTRH 187 (380)
T ss_dssp GGGCEEEEECCSHHHHHHHHHHHHTTCEEEEECHHHHHH----STTSC-CCCHHHHH-HHCSEEEECCCCCSSSSSCCTT
T ss_pred cCCCEEEEEeCCHHHHHHHHHHHHCCCEEEEEcCChhhh----ccCcc-cCCHHHHH-HhCCEEEEeccCccccccchhh
Confidence 457899999999999999999999999999999865321 23432 45788887 78999999999765 334
Q ss_pred HHh-hccccccCCccEEEEcCCCCchHHHHHHhhCC
Q 044593 104 VLK-SIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLP 138 (335)
Q Consensus 104 vl~-~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~ 138 (335)
++. +. ...+++|++++|++.......+.+.+.+.
T Consensus 188 li~~~~-l~~mk~gailIN~sRG~vvd~~aL~~aL~ 222 (380)
T 2o4c_A 188 LLDEPR-LAALRPGTWLVNASRGAVVDNQALRRLLE 222 (380)
T ss_dssp SBCHHH-HHTSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred hcCHHH-HhhCCCCcEEEECCCCcccCHHHHHHHHH
Confidence 442 22 24578999999998765444455555553
No 130
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=98.85 E-value=5.2e-09 Score=96.87 Aligned_cols=93 Identities=19% Similarity=0.260 Sum_probs=72.7
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCcee--cChhhHhhcCCCEEEEecCchhHHHHH
Q 044593 28 KSTSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFF--ADLNDLCELHPDVVLLSTSILSTQSVL 105 (335)
Q Consensus 28 ~~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~--~~~~~~~~~~aDvVIlavp~~~~~~vl 105 (335)
...+++|+|||+|.||..+++.++..|++|++|||+++..+.+.+.|+... .++.+++ .++|+|++++|...+.+
T Consensus 152 ~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~l~~~l-~~aDvVi~~~p~~~i~~-- 228 (293)
T 3d4o_A 152 TIHGANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARIAEMGMEPFHISKAAQEL-RDVDVCINTIPALVVTA-- 228 (293)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTSEEEEGGGHHHHT-TTCSEEEECCSSCCBCH--
T ss_pred CCCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeecChhhHHHHh-cCCCEEEECCChHHhCH--
Confidence 346789999999999999999999999999999999866555566776542 4566776 79999999999765422
Q ss_pred hhccccccCCccEEEEcCCC
Q 044593 106 KSIPFQRLKRSTLFVDVLSV 125 (335)
Q Consensus 106 ~~l~~~~l~~~~iVvd~~Sv 125 (335)
..+ ..++++.+++|++..
T Consensus 229 ~~l--~~mk~~~~lin~ar~ 246 (293)
T 3d4o_A 229 NVL--AEMPSHTFVIDLASK 246 (293)
T ss_dssp HHH--HHSCTTCEEEECSST
T ss_pred HHH--HhcCCCCEEEEecCC
Confidence 122 246789999999864
No 131
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=98.83 E-value=8.5e-09 Score=95.70 Aligned_cols=93 Identities=19% Similarity=0.255 Sum_probs=72.5
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCce--ecChhhHhhcCCCEEEEecCchhHHHHH
Q 044593 28 KSTSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPF--FADLNDLCELHPDVVLLSTSILSTQSVL 105 (335)
Q Consensus 28 ~~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~--~~~~~~~~~~~aDvVIlavp~~~~~~vl 105 (335)
....++|+|||+|.||..+++.++..|++|++|||+++..+.+.+.|+.. ..++++++ .++|+||+++|...+.+-
T Consensus 154 ~l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~~~l~~~l-~~aDvVi~~~p~~~i~~~- 231 (300)
T 2rir_A 154 TIHGSQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARITEMGLVPFHTDELKEHV-KDIDICINTIPSMILNQT- 231 (300)
T ss_dssp CSTTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCEEEEGGGHHHHS-TTCSEEEECCSSCCBCHH-
T ss_pred CCCCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCeEEchhhHHHHh-hCCCEEEECCChhhhCHH-
Confidence 34678999999999999999999999999999999986555455567643 24667777 799999999998643221
Q ss_pred hhccccccCCccEEEEcCCC
Q 044593 106 KSIPFQRLKRSTLFVDVLSV 125 (335)
Q Consensus 106 ~~l~~~~l~~~~iVvd~~Sv 125 (335)
.+ ..++++.+++|++..
T Consensus 232 -~~--~~mk~g~~lin~a~g 248 (300)
T 2rir_A 232 -VL--SSMTPKTLILDLASR 248 (300)
T ss_dssp -HH--TTSCTTCEEEECSST
T ss_pred -HH--HhCCCCCEEEEEeCC
Confidence 12 347789999999864
No 132
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=98.82 E-value=3.5e-09 Score=87.41 Aligned_cols=88 Identities=22% Similarity=0.304 Sum_probs=68.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcH-HHHHhCCCc--eecChhhHhhcCCCEEEEecCchhHHHHHhh
Q 044593 31 SLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSP-AVRQQLNAP--FFADLNDLCELHPDVVLLSTSILSTQSVLKS 107 (335)
Q Consensus 31 ~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~-~~a~~~g~~--~~~~~~~~~~~~aDvVIlavp~~~~~~vl~~ 107 (335)
.++|+|||+|.||..++..|.+.|++|+++||+++.. +.+.+.|.. ...+..+.+ .++|+||.|||.... ++
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~~~~~~~~~~~-~~~Divi~at~~~~~--~~-- 95 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEYVLINDIDSLI-KNNDVIITATSSKTP--IV-- 95 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEEEECSCHHHHH-HTCSEEEECSCCSSC--SB--
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCceEeecCHHHHh-cCCCEEEEeCCCCCc--Ee--
Confidence 7899999999999999999999999999999998765 345566654 345667777 799999999997732 11
Q ss_pred ccccccCCccEEEEcCC
Q 044593 108 IPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 108 l~~~~l~~~~iVvd~~S 124 (335)
....++++.+++|++.
T Consensus 96 -~~~~l~~g~~vid~~~ 111 (144)
T 3oj0_A 96 -EERSLMPGKLFIDLGN 111 (144)
T ss_dssp -CGGGCCTTCEEEECCS
T ss_pred -eHHHcCCCCEEEEccC
Confidence 1134678899999863
No 133
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=98.81 E-value=8.5e-09 Score=85.72 Aligned_cols=104 Identities=15% Similarity=0.112 Sum_probs=78.4
Q ss_pred CCeEEEEcc----cHHHHHHHHHHHHcCCeEEEEcCCC--CcHHHHHhCCCceecChhhHhhcCCCEEEEecCchhHHHH
Q 044593 31 SLKIAVIGF----GNFGQFLAKAFARHHHTLLVHSRSD--HSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILSTQSV 104 (335)
Q Consensus 31 ~~kI~IIG~----G~mG~siA~~L~~~G~~V~~~dr~~--~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~~~~v 104 (335)
..+|+|||+ |.||..+++.|.+.|++|+.++++. +.. .|+..+.++.++. ..+|++++|+|...+.++
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~g~~i-----~G~~~~~sl~el~-~~~Dlvii~vp~~~v~~v 86 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKTL-----LGQQGYATLADVP-EKVDMVDVFRNSEAAWGV 86 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSSSTTSEE-----TTEECCSSTTTCS-SCCSEEECCSCSTHHHHH
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCccccccc-----CCeeccCCHHHcC-CCCCEEEEEeCHHHHHHH
Confidence 567999999 8999999999999999977777765 322 4777777888876 789999999999989999
Q ss_pred HhhccccccCCccEEEEcCCCCchHHHHHHhhCCCCCceEe
Q 044593 105 LKSIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQDFDILC 145 (335)
Q Consensus 105 l~~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~~~~~v~ 145 (335)
+.++. . ...+.+|++.++......+.++ ..+.++++
T Consensus 87 ~~~~~-~-~g~~~i~i~~~~~~~~l~~~a~---~~Gi~~ig 122 (145)
T 2duw_A 87 AQEAI-A-IGAKTLWLQLGVINEQAAVLAR---EAGLSVVM 122 (145)
T ss_dssp HHHHH-H-HTCCEEECCTTCCCHHHHHHHH---TTTCEEEC
T ss_pred HHHHH-H-cCCCEEEEcCChHHHHHHHHHH---HcCCEEEc
Confidence 98874 2 4556788887655333333332 34667775
No 134
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=98.81 E-value=9.9e-09 Score=80.69 Aligned_cols=91 Identities=18% Similarity=0.201 Sum_probs=69.0
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcC-CeEEEEcCCCCcHHHHHhCCCce----ec---ChhhHhhcCCCEEEEecCchhH
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHH-HTLLVHSRSDHSPAVRQQLNAPF----FA---DLNDLCELHPDVVLLSTSILST 101 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G-~~V~~~dr~~~~~~~a~~~g~~~----~~---~~~~~~~~~aDvVIlavp~~~~ 101 (335)
.+++|+|+|+|.||..++..|.+.| ++|+++||+++..+.....++.. .. +..+++ .++|+||.|+|....
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-~~~d~vi~~~~~~~~ 82 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKAL-GGFDAVISAAPFFLT 82 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHT-TTCSEEEECSCGGGH
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHH-cCCCEEEECCCchhh
Confidence 4579999999999999999999999 89999999987766555555532 12 223444 689999999998876
Q ss_pred HHHHhhccccccCCccEEEEcCCC
Q 044593 102 QSVLKSIPFQRLKRSTLFVDVLSV 125 (335)
Q Consensus 102 ~~vl~~l~~~~l~~~~iVvd~~Sv 125 (335)
..++... .+.+..++|+++.
T Consensus 83 ~~~~~~~----~~~g~~~~~~~~~ 102 (118)
T 3ic5_A 83 PIIAKAA----KAAGAHYFDLTED 102 (118)
T ss_dssp HHHHHHH----HHTTCEEECCCSC
T ss_pred HHHHHHH----HHhCCCEEEecCc
Confidence 6666554 3456778888654
No 135
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=98.78 E-value=1.7e-08 Score=81.72 Aligned_cols=94 Identities=13% Similarity=0.195 Sum_probs=66.0
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHH-hCCCce-e---cChhhH----hhcCCCEEEEecCchh
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQ-QLNAPF-F---ADLNDL----CELHPDVVLLSTSILS 100 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~-~~g~~~-~---~~~~~~----~~~~aDvVIlavp~~~ 100 (335)
+.|+|+|+|+|.+|..++..|.+.|++|+++|++++..+... +.|+.. . .+.+.+ + .++|+||+|+|...
T Consensus 3 ~~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~-~~~d~vi~~~~~~~ 81 (140)
T 1lss_A 3 HGMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGI-EDADMYIAVTGKEE 81 (140)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTT-TTCSEEEECCSCHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCc-ccCCEEEEeeCCch
Confidence 358999999999999999999999999999999987655444 346532 1 122221 3 57999999999886
Q ss_pred HHHHHhhccccccCCccEEEEcCCC
Q 044593 101 TQSVLKSIPFQRLKRSTLFVDVLSV 125 (335)
Q Consensus 101 ~~~vl~~l~~~~l~~~~iVvd~~Sv 125 (335)
....+..+. ..++++.+|+.+.+.
T Consensus 82 ~~~~~~~~~-~~~~~~~ii~~~~~~ 105 (140)
T 1lss_A 82 VNLMSSLLA-KSYGINKTIARISEI 105 (140)
T ss_dssp HHHHHHHHH-HHTTCCCEEEECSST
T ss_pred HHHHHHHHH-HHcCCCEEEEEecCH
Confidence 555444442 335666777766543
No 136
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=98.76 E-value=3.1e-08 Score=92.65 Aligned_cols=112 Identities=17% Similarity=0.136 Sum_probs=75.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHHcCC-eEEEEcCCCCcHHHH-Hh---------C--CCceecChhhHhhcCCCEEEEecC
Q 044593 31 SLKIAVIGFGNFGQFLAKAFARHHH-TLLVHSRSDHSPAVR-QQ---------L--NAPFFADLNDLCELHPDVVLLSTS 97 (335)
Q Consensus 31 ~~kI~IIG~G~mG~siA~~L~~~G~-~V~~~dr~~~~~~~a-~~---------~--g~~~~~~~~~~~~~~aDvVIlavp 97 (335)
.|||+|||+|.||+++|..|..+|+ +|++||++++..+.. .+ . .+..+++. +.+ ++||+||+|++
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~-~a~-~~aDiVi~avg 81 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGTDDY-ADI-SGSDVVIITAS 81 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGG-TTCSEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHh-CCCCEEEEeCC
Confidence 5799999999999999999999998 999999998755421 11 1 22234566 455 79999999993
Q ss_pred --------------c--hhHHHHHhhccccccCCccEEEEcCCCCchHHHHHHhhCCC-CCceEec
Q 044593 98 --------------I--LSTQSVLKSIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQ-DFDILCT 146 (335)
Q Consensus 98 --------------~--~~~~~vl~~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~-~~~~v~~ 146 (335)
. ....++++++. +. .++++++.+++.-......+.+..+. ..++++.
T Consensus 82 ~p~~~g~~r~d~~~~~~~i~~~i~~~i~-~~-~~~~iii~~sNp~~~~~~~~~~~~~~~~~rviG~ 145 (317)
T 2ewd_A 82 IPGRPKDDRSELLFGNARILDSVAEGVK-KY-CPNAFVICITNPLDVMVSHFQKVSGLPHNKVCGM 145 (317)
T ss_dssp CSSCCSSCGGGGHHHHHHHHHHHHHHHH-HH-CTTSEEEECCSSHHHHHHHHHHHHCCCGGGEEES
T ss_pred CCCCCCCcHHHHHHhhHHHHHHHHHHHH-HH-CCCcEEEEeCChHHHHHHHHHHhhCCCHHHEEec
Confidence 2 22567777774 33 46888887765433334455544321 2356654
No 137
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=98.73 E-value=1.3e-08 Score=95.96 Aligned_cols=108 Identities=15% Similarity=0.208 Sum_probs=78.7
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCchh-HHHHHh
Q 044593 28 KSTSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILS-TQSVLK 106 (335)
Q Consensus 28 ~~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~-~~~vl~ 106 (335)
...+++|||||+|.||..+|+.++..|++|.+||+..... ..+.++. ..++++++ ++||+|++++|... +..++.
T Consensus 138 ~l~g~tvGIiG~G~IG~~va~~~~~fg~~v~~~d~~~~~~--~~~~~~~-~~~l~ell-~~sDivslh~Plt~~T~~li~ 213 (334)
T 3kb6_A 138 ELNRLTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKRED--LKEKGCV-YTSLDELL-KESDVISLHVPYTKETHHMIN 213 (334)
T ss_dssp CGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHH--HHHTTCE-ECCHHHHH-HHCSEEEECCCCCTTTTTCBC
T ss_pred eecCcEEEEECcchHHHHHHHhhcccCceeeecCCccchh--hhhcCce-ecCHHHHH-hhCCEEEEcCCCChhhccCcC
Confidence 3467899999999999999999999999999999876532 3344544 45788888 89999999999764 333333
Q ss_pred hccccccCCccEEEEcCCCCchHHHHHHhhCCC
Q 044593 107 SIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQ 139 (335)
Q Consensus 107 ~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~ 139 (335)
.-....+++++++++++-..-.-.+++.+.+..
T Consensus 214 ~~~l~~mk~~a~lIN~aRG~iVde~aL~~aL~~ 246 (334)
T 3kb6_A 214 EERISLMKDGVYLINTARGKVVDTDALYRAYQR 246 (334)
T ss_dssp HHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHT
T ss_pred HHHHhhcCCCeEEEecCccccccHHHHHHHHHh
Confidence 211235789999999976544444555555543
No 138
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=98.73 E-value=4.8e-08 Score=91.00 Aligned_cols=90 Identities=18% Similarity=0.265 Sum_probs=64.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHHcC--CeEEEEcCCCCcHHH-HHhC---------CCce-ecChhhHhhcCCCEEEEecC
Q 044593 31 SLKIAVIGFGNFGQFLAKAFARHH--HTLLVHSRSDHSPAV-RQQL---------NAPF-FADLNDLCELHPDVVLLSTS 97 (335)
Q Consensus 31 ~~kI~IIG~G~mG~siA~~L~~~G--~~V~~~dr~~~~~~~-a~~~---------g~~~-~~~~~~~~~~~aDvVIlavp 97 (335)
+|||+|||+|.||+++|..|..+| ++|+++|++++..+. +.+. .+.. .++. +.+ +++|+||+|+|
T Consensus 1 m~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~~-~~aDvViiav~ 78 (309)
T 1hyh_A 1 ARKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW-AAL-ADADVVISTLG 78 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG-GGG-TTCSEEEECCS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCCH-HHh-CCCCEEEEecC
Confidence 379999999999999999999999 799999999765432 2221 1233 4566 455 79999999999
Q ss_pred chh--------------------HHHHHhhccccccCCccEEEEcCC
Q 044593 98 ILS--------------------TQSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 98 ~~~--------------------~~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
... +.++++.+. +. .++++|+.++.
T Consensus 79 ~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~-~~-~~~~~ii~~tN 123 (309)
T 1hyh_A 79 NIKLQQDNPTGDRFAELKFTSSMVQSVGTNLK-ES-GFHGVLVVISN 123 (309)
T ss_dssp CGGGTC-------CTTHHHHHHHHHHHHHHHH-HT-TCCSEEEECSS
T ss_pred CcccCCCCCCCCHHHHHHHHHHHHHHHHHHHH-HH-CCCcEEEEEcC
Confidence 765 356666664 33 35666665543
No 139
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=98.71 E-value=1.8e-08 Score=99.13 Aligned_cols=101 Identities=10% Similarity=0.142 Sum_probs=77.8
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCchhH--HHHH
Q 044593 28 KSTSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILST--QSVL 105 (335)
Q Consensus 28 ~~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~~--~~vl 105 (335)
...+++|+|||+|.||.++|+.++..|++|++||+++.....+...|+.. .++++++ .++|+|++++....+ .+.+
T Consensus 254 ~l~GktVgIIG~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~~~g~~~-~~l~ell-~~aDiVi~~~~t~~lI~~~~l 331 (479)
T 1v8b_A 254 LISGKIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGFNV-VTLDEIV-DKGDFFITCTGNVDVIKLEHL 331 (479)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCEE-CCHHHHT-TTCSEEEECCSSSSSBCHHHH
T ss_pred ccCCCEEEEEeeCHHHHHHHHHHHhCcCEEEEEeCChhhHHHHHHcCCEe-cCHHHHH-hcCCEEEECCChhhhcCHHHH
Confidence 35688999999999999999999999999999999986543456667744 4788887 899999999743332 1222
Q ss_pred hhccccccCCccEEEEcCCCCc-hHHHHHHh
Q 044593 106 KSIPFQRLKRSTLFVDVLSVKE-FPRNLFLK 135 (335)
Q Consensus 106 ~~l~~~~l~~~~iVvd~~SvK~-~~~~~l~~ 135 (335)
..+++|++|+|+++... .-.+.+.+
T Consensus 332 -----~~MK~gailiNvgrg~~EId~~aL~~ 357 (479)
T 1v8b_A 332 -----LKMKNNAVVGNIGHFDDEIQVNELFN 357 (479)
T ss_dssp -----TTCCTTCEEEECSSTTTSBCHHHHHT
T ss_pred -----hhcCCCcEEEEeCCCCccccchhhhc
Confidence 34789999999998766 34566655
No 140
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=98.65 E-value=2.2e-08 Score=98.85 Aligned_cols=92 Identities=10% Similarity=0.128 Sum_probs=72.0
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCchhH--HHHHh
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILST--QSVLK 106 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~~--~~vl~ 106 (335)
..+++|+|||+|.||..+|+.++..|++|++||+++.....+...|+.. .++++++ .++|+|++++....+ .+.+
T Consensus 275 L~GktVgIIG~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~~~G~~~-~~l~ell-~~aDiVi~~~~t~~lI~~~~l- 351 (494)
T 3d64_A 275 IAGKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAAMEGYRV-VTMEYAA-DKADIFVTATGNYHVINHDHM- 351 (494)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSCHHHHHHHHTTTCEE-CCHHHHT-TTCSEEEECSSSSCSBCHHHH-
T ss_pred cCCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCChHhHHHHHHcCCEe-CCHHHHH-hcCCEEEECCCcccccCHHHH-
Confidence 5678999999999999999999999999999999986543355567654 4688887 899999999853321 2222
Q ss_pred hccccccCCccEEEEcCCCCc
Q 044593 107 SIPFQRLKRSTLFVDVLSVKE 127 (335)
Q Consensus 107 ~l~~~~l~~~~iVvd~~SvK~ 127 (335)
..++++++|+|+++...
T Consensus 352 ----~~MK~gAilINvgrg~v 368 (494)
T 3d64_A 352 ----KAMRHNAIVCNIGHFDS 368 (494)
T ss_dssp ----HHCCTTEEEEECSSSSC
T ss_pred ----hhCCCCcEEEEcCCCcc
Confidence 34679999999987654
No 141
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=98.64 E-value=7.5e-08 Score=90.18 Aligned_cols=89 Identities=16% Similarity=0.274 Sum_probs=62.6
Q ss_pred CeEEEEcccHHHHHHHHHHHHcCC--eEEEEcCCCCcHHHHH-hC--------CCce-ecChhhHhhcCCCEEEEecCch
Q 044593 32 LKIAVIGFGNFGQFLAKAFARHHH--TLLVHSRSDHSPAVRQ-QL--------NAPF-FADLNDLCELHPDVVLLSTSIL 99 (335)
Q Consensus 32 ~kI~IIG~G~mG~siA~~L~~~G~--~V~~~dr~~~~~~~a~-~~--------g~~~-~~~~~~~~~~~aDvVIlavp~~ 99 (335)
|||+|||+|.||++++..|...|+ +|+++|++++..+... +. .... .++. +.+ +++|+||+|+|..
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~-~~~-~~aDvViiav~~~ 78 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDY-ADL-KGSDVVIVAAGVP 78 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCG-GGG-TTCSEEEECCCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEeCCH-HHh-CCCCEEEEccCCC
Confidence 699999999999999999999999 9999999976543221 11 1111 2343 345 7999999999964
Q ss_pred h----------------HHHHHhhccccccCCccEEEEcCC
Q 044593 100 S----------------TQSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 100 ~----------------~~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
. +.++++.+. +. .++++|+.+++
T Consensus 79 ~~~g~~r~dl~~~n~~i~~~i~~~i~-~~-~~~~~ii~~tN 117 (319)
T 1a5z_A 79 QKPGETRLQLLGRNARVMKEIARNVS-KY-APDSIVIVVTN 117 (319)
T ss_dssp CCSSCCHHHHHHHHHHHHHHHHHHHH-HH-CTTCEEEECSS
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHH-hh-CCCeEEEEeCC
Confidence 3 356666664 33 46667666644
No 142
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=98.64 E-value=7.9e-08 Score=89.56 Aligned_cols=91 Identities=18% Similarity=0.287 Sum_probs=63.5
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCC--eEEEEcCCCCcHH-HHH--hCCC------c--eecChhhHhhcCCCEEEEec
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHHH--TLLVHSRSDHSPA-VRQ--QLNA------P--FFADLNDLCELHPDVVLLST 96 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G~--~V~~~dr~~~~~~-~a~--~~g~------~--~~~~~~~~~~~~aDvVIlav 96 (335)
++|||+|||+|.||+.+|..|...|+ +|+++|++++..+ .+. ..+. . ..++.+ .+ .++|+||+|+
T Consensus 6 ~~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~-~~aD~Vii~v 83 (319)
T 1lld_A 6 KPTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPE-IC-RDADMVVITA 83 (319)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGG-GG-TTCSEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeCCCHH-Hh-CCCCEEEECC
Confidence 46899999999999999999999998 9999999975443 111 1222 1 122443 44 7899999999
Q ss_pred CchhH----------------HHHHhhccccccCCccEEEEcCC
Q 044593 97 SILST----------------QSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 97 p~~~~----------------~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
+.... .++++.+. + ..++++|+.++.
T Consensus 84 ~~~~~~g~~r~~~~~~n~~~~~~~~~~i~-~-~~~~~~vi~~~N 125 (319)
T 1lld_A 84 GPRQKPGQSRLELVGATVNILKAIMPNLV-K-VAPNAIYMLITN 125 (319)
T ss_dssp CCCCCTTCCHHHHHHHHHHHHHHHHHHHH-H-HCTTSEEEECCS
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHH-H-hCCCceEEEecC
Confidence 54432 26677774 3 367778877654
No 143
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=98.63 E-value=6.1e-09 Score=94.55 Aligned_cols=115 Identities=16% Similarity=0.136 Sum_probs=77.3
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCC-eEEEEcCCCCcHH-HHHhCCCceecChhhHhhcCCCEEEEecCchhHHHHHhh
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHHH-TLLVHSRSDHSPA-VRQQLNAPFFADLNDLCELHPDVVLLSTSILSTQSVLKS 107 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G~-~V~~~dr~~~~~~-~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~~~~vl~~ 107 (335)
.. +|+|||+|.||.+++..|.+.|. +|++++|+++..+ .+.+.+.....++.+.+ .++|+||.|||...... ...
T Consensus 108 ~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~~~~~~~~~~~~-~~aDiVInatp~gm~p~-~~~ 184 (253)
T 3u62_A 108 KE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVKIFSLDQLDEVV-KKAKSLFNTTSVGMKGE-ELP 184 (253)
T ss_dssp CS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCEEEEGGGHHHHH-HTCSEEEECSSTTTTSC-CCS
T ss_pred CC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcccCCHHHHHhhh-cCCCEEEECCCCCCCCC-CCC
Confidence 45 99999999999999999999998 8999999976543 22222322334555656 78999999999653221 112
Q ss_pred ccccccCCccEEEEcCCCCchHHHHHHhhCCCCCc-eEeccccC
Q 044593 108 IPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQDFD-ILCTHPMF 150 (335)
Q Consensus 108 l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~~~~-~v~~HPma 150 (335)
+....++++.+|+|+....+..++..++ .+.+ .+.+.||.
T Consensus 185 i~~~~l~~~~~V~Divy~~T~ll~~A~~---~G~~~~~~Gl~ML 225 (253)
T 3u62_A 185 VSDDSLKNLSLVYDVIYFDTPLVVKARK---LGVKHIIKGNLMF 225 (253)
T ss_dssp CCHHHHTTCSEEEECSSSCCHHHHHHHH---HTCSEEECTHHHH
T ss_pred CCHHHhCcCCEEEEeeCCCcHHHHHHHH---CCCcEEECCHHHH
Confidence 2223467889999986554444444443 2455 66666665
No 144
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=98.62 E-value=1.1e-07 Score=79.18 Aligned_cols=94 Identities=15% Similarity=0.176 Sum_probs=65.2
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHH-hCCCcee-c---Chhh---H-hhcCCCEEEEecCchh
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQ-QLNAPFF-A---DLND---L-CELHPDVVLLSTSILS 100 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~-~~g~~~~-~---~~~~---~-~~~~aDvVIlavp~~~ 100 (335)
..++|.|+|+|.+|..++..|.+.|++|+++|++++..+.+. +.|.... . +.+. . + .++|+||+|+|...
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~-~~ad~Vi~~~~~~~ 96 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGM-EKADMVFAFTNDDS 96 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTG-GGCSEEEECSSCHH
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCc-ccCCEEEEEeCCcH
Confidence 468999999999999999999999999999999987766555 5565322 1 2221 1 3 57999999999877
Q ss_pred HHHHHhhccccccCCccEEEEcCC
Q 044593 101 TQSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 101 ~~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
....+..+.....+...+|+.+.+
T Consensus 97 ~~~~~~~~~~~~~~~~~iv~~~~~ 120 (155)
T 2g1u_A 97 TNFFISMNARYMFNVENVIARVYD 120 (155)
T ss_dssp HHHHHHHHHHHTSCCSEEEEECSS
T ss_pred HHHHHHHHHHHHCCCCeEEEEECC
Confidence 655444442111233345555544
No 145
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=98.61 E-value=1e-07 Score=85.17 Aligned_cols=82 Identities=17% Similarity=0.329 Sum_probs=64.0
Q ss_pred CeEEEEcccHHHHHHHHHHHHcCCeE-EEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCchhHHHHHhhccc
Q 044593 32 LKIAVIGFGNFGQFLAKAFARHHHTL-LVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILSTQSVLKSIPF 110 (335)
Q Consensus 32 ~kI~IIG~G~mG~siA~~L~~~G~~V-~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~~~~vl~~l~~ 110 (335)
|||+|||+|.||..++..|.+.|+++ .+||+++.. + + .+.++++++..++|+||+|+|+....+++...
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~~g~~lv~v~d~~~~~-~---~----~~~~~~~l~~~~~DvVv~~~~~~~~~~~~~~~-- 70 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLERNGFEIAAILDVRGEH-E---K----MVRGIDEFLQREMDVAVEAASQQAVKDYAEKI-- 70 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCCC-T---T----EESSHHHHTTSCCSEEEECSCHHHHHHHHHHH--
T ss_pred CEEEEECCCHHHHHHHHHHhcCCCEEEEEEecCcch-h---h----hcCCHHHHhcCCCCEEEECCCHHHHHHHHHHH--
Confidence 68999999999999999999889997 689998632 1 1 55677777523799999999998777766543
Q ss_pred cccCCccEEEEcCCC
Q 044593 111 QRLKRSTLFVDVLSV 125 (335)
Q Consensus 111 ~~l~~~~iVvd~~Sv 125 (335)
++.|..|++.++.
T Consensus 71 --l~~G~~vv~~~~~ 83 (236)
T 2dc1_A 71 --LKAGIDLIVLSTG 83 (236)
T ss_dssp --HHTTCEEEESCGG
T ss_pred --HHCCCcEEEECcc
Confidence 5578888887543
No 146
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=98.61 E-value=1.1e-07 Score=77.68 Aligned_cols=94 Identities=15% Similarity=0.018 Sum_probs=64.7
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCce----ecChhhHh---hcCCCEEEEecCchhHH
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPF----FADLNDLC---ELHPDVVLLSTSILSTQ 102 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~----~~~~~~~~---~~~aDvVIlavp~~~~~ 102 (335)
.+++|.|+|+|.+|..++..|.+.|++|+++|++++..+.+.+.|+.. .++.+.+. ..++|+||+++|.....
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~~~~n 84 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGSDDEFN 84 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCSCHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecCCHHHH
Confidence 467899999999999999999999999999999998777677777642 12322221 15799999999976544
Q ss_pred HHHhhccccccCCccEEEEcCC
Q 044593 103 SVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 103 ~vl~~l~~~~l~~~~iVvd~~S 124 (335)
..+.... ..+....+|+-+.+
T Consensus 85 ~~~~~~a-~~~~~~~iia~~~~ 105 (141)
T 3llv_A 85 LKILKAL-RSVSDVYAIVRVSS 105 (141)
T ss_dssp HHHHHHH-HHHCCCCEEEEESC
T ss_pred HHHHHHH-HHhCCceEEEEEcC
Confidence 3333332 12334455555543
No 147
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=98.60 E-value=6.2e-08 Score=93.84 Aligned_cols=101 Identities=11% Similarity=0.139 Sum_probs=76.3
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCchhHHHHHh-h
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILSTQSVLK-S 107 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~~~~vl~-~ 107 (335)
..+++|+|||+|.||..+|..|+..|.+|+++|+++.....+...|+.. .++++++ .++|+|++++....+ +. +
T Consensus 209 L~GktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~~G~~~-~sL~eal-~~ADVVilt~gt~~i---I~~e 283 (436)
T 3h9u_A 209 IAGKTACVCGYGDVGKGCAAALRGFGARVVVTEVDPINALQAAMEGYQV-LLVEDVV-EEAHIFVTTTGNDDI---ITSE 283 (436)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE-CCHHHHT-TTCSEEEECSSCSCS---BCTT
T ss_pred ccCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCChhhhHHHHHhCCee-cCHHHHH-hhCCEEEECCCCcCc---cCHH
Confidence 3578999999999999999999999999999999986655566777654 4788888 899999987764332 22 2
Q ss_pred ccccccCCccEEEEcCCCCc-hHHHHHHh
Q 044593 108 IPFQRLKRSTLFVDVLSVKE-FPRNLFLK 135 (335)
Q Consensus 108 l~~~~l~~~~iVvd~~SvK~-~~~~~l~~ 135 (335)
. ...++++++|++++.... .-.+.+.+
T Consensus 284 ~-l~~MK~gAIVINvgRg~vEID~~~L~~ 311 (436)
T 3h9u_A 284 H-FPRMRDDAIVCNIGHFDTEIQVAWLKA 311 (436)
T ss_dssp T-GGGCCTTEEEEECSSSGGGBCHHHHHH
T ss_pred H-HhhcCCCcEEEEeCCCCCccCHHHHHh
Confidence 2 245789999999986543 22344443
No 148
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=98.60 E-value=4e-08 Score=93.86 Aligned_cols=89 Identities=15% Similarity=0.140 Sum_probs=69.2
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceec-------------------------ChhhH
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFA-------------------------DLNDL 84 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~-------------------------~~~~~ 84 (335)
...||+|||+|.||...++.++..|.+|+++|++++..+.+.+.|..+.. ++.+.
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e~ 262 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALEDA 262 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHHH
Confidence 46799999999999999999999999999999999888778877764321 33455
Q ss_pred hhcCCCEEEEec--Cchh-----HHHHHhhccccccCCccEEEEcCC
Q 044593 85 CELHPDVVLLST--SILS-----TQSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 85 ~~~~aDvVIlav--p~~~-----~~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
+ .++|+||.++ |... ..+.++ .+++|.+|+|++.
T Consensus 263 l-~~aDIVI~tv~iPg~~ap~Lvt~emv~-----~MkpGsVIVDvA~ 303 (381)
T 3p2y_A 263 I-TKFDIVITTALVPGRPAPRLVTAAAAT-----GMQPGSVVVDLAG 303 (381)
T ss_dssp H-TTCSEEEECCCCTTSCCCCCBCHHHHH-----TSCTTCEEEETTG
T ss_pred H-hcCCEEEECCCCCCcccceeecHHHHh-----cCCCCcEEEEEeC
Confidence 6 7999999986 4322 234333 4668999999974
No 149
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=98.59 E-value=2.3e-07 Score=87.24 Aligned_cols=91 Identities=14% Similarity=0.177 Sum_probs=64.4
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCC-eEEEEcCCCCcHHH-HHh----------C-CCceecChhhHhhcCCCEEEEec
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHHH-TLLVHSRSDHSPAV-RQQ----------L-NAPFFADLNDLCELHPDVVLLST 96 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G~-~V~~~dr~~~~~~~-a~~----------~-g~~~~~~~~~~~~~~aDvVIlav 96 (335)
+.+||+|||+|.||..+|..|+..|+ +|++||++++..+. +.+ . .+..+++. +.+ ++||+||+++
T Consensus 13 ~~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al-~~aD~VI~av 90 (328)
T 2hjr_A 13 MRKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNY-EYL-QNSDVVIITA 90 (328)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGG-TTCSEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCH-HHH-CCCCEEEEcC
Confidence 34799999999999999999999998 99999999875542 111 0 12344666 445 7999999998
Q ss_pred --Cc--------------hhHHHHHhhccccccCCccEEEEcCC
Q 044593 97 --SI--------------LSTQSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 97 --p~--------------~~~~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
|. ....++++++. +. .++++++.+++
T Consensus 91 g~p~k~g~tr~dl~~~n~~i~~~i~~~i~-~~-~p~a~viv~tN 132 (328)
T 2hjr_A 91 GVPRKPNMTRSDLLTVNAKIVGSVAENVG-KY-CPNAFVICITN 132 (328)
T ss_dssp SCCCCTTCCSGGGHHHHHHHHHHHHHHHH-HH-CTTCEEEECCS
T ss_pred CCCCCCCCchhhHHhhhHHHHHHHHHHHH-HH-CCCeEEEEecC
Confidence 42 11455666664 33 46777766544
No 150
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.59 E-value=1.6e-07 Score=80.24 Aligned_cols=72 Identities=13% Similarity=0.163 Sum_probs=57.5
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHc-CCeEEEEcCCCCcHHHHHhCCCcee----cChh---hH--hhcCCCEEEEecCc
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARH-HHTLLVHSRSDHSPAVRQQLNAPFF----ADLN---DL--CELHPDVVLLSTSI 98 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~-G~~V~~~dr~~~~~~~a~~~g~~~~----~~~~---~~--~~~~aDvVIlavp~ 98 (335)
...++|+|+|+|.||..++..|.+. |++|+++|++++..+.+.+.|+... ++.+ ++ + .++|+||+|+|.
T Consensus 37 ~~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~-~~ad~vi~~~~~ 115 (183)
T 3c85_A 37 PGHAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDT-GHVKLVLLAMPH 115 (183)
T ss_dssp CTTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSC-CCCCEEEECCSS
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCC-CCCCEEEEeCCC
Confidence 3467999999999999999999999 9999999999987776777787532 2222 22 3 579999999997
Q ss_pred hhH
Q 044593 99 LST 101 (335)
Q Consensus 99 ~~~ 101 (335)
...
T Consensus 116 ~~~ 118 (183)
T 3c85_A 116 HQG 118 (183)
T ss_dssp HHH
T ss_pred hHH
Confidence 654
No 151
>2b0j_A 5,10-methenyltetrahydromethanopterin hydrogenase; rossmann fold, helix bundle, oxidoreductase; 1.75A {Methanocaldococcus jannaschii} SCOP: a.100.1.11 c.2.1.6 PDB: 3f47_A* 3daf_A* 3dag_A* 3f46_A* 3h65_A*
Probab=98.59 E-value=4.2e-06 Score=75.73 Aligned_cols=116 Identities=13% Similarity=0.149 Sum_probs=91.1
Q ss_pred CCceecChhhHhhcCCCEEEEecCchh-HHHHHhhccccccCCccEEEEcCCCCchHHHHHHhhCC-CCCceEeccccCC
Q 044593 74 NAPFFADLNDLCELHPDVVLLSTSILS-TQSVLKSIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLP-QDFDILCTHPMFG 151 (335)
Q Consensus 74 g~~~~~~~~~~~~~~aDvVIlavp~~~-~~~vl~~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~-~~~~~v~~HPmaG 151 (335)
|+..++|..+++ +++|++|+-+|... ..++++.+. +++++|++|+++|++.+.....+-+.+. +++.+.+.||-+-
T Consensus 128 GVkVtsDD~EAv-k~AEi~IlftPfG~~t~~Iakkii-~~lpEgAII~nTCTipp~~ly~~le~l~R~DvgIsS~HPaaV 205 (358)
T 2b0j_A 128 GLKVTSDDREAV-EGADIVITWLPKGNKQPDIIKKFA-DAIPEGAIVTHACTIPTTKFAKIFKDLGREDLNITSYHPGCV 205 (358)
T ss_dssp TCEEESCHHHHH-TTCSEEEECCTTCTTHHHHHHHHG-GGSCTTCEEEECSSSCHHHHHHHHHHTTCTTSEEEECBCSSC
T ss_pred CcEeecchHHHh-cCCCEEEEecCCCCCcHHHHHHHH-hhCcCCCEEecccCCCHHHHHHHHHHhCcccCCeeccCCCCC
Confidence 666778878887 89999999999987 788999985 7899999999999988766655544454 4588999999888
Q ss_pred CCCcccccCCCcceecccccCCChhHHHHHHHHHHHHHhcCCEEEEeChHH
Q 044593 152 PESAKSSWENLPFMYDKVRIGNDEERIKRVDKFLDVFAKEGCRMVEMSCFD 202 (335)
Q Consensus 152 ~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~~~v~~l~~~~G~~v~~~~~~e 202 (335)
|+. +|+.+.- ..-.++++++++.+|.++.|..++.+.++-
T Consensus 206 Pgt-----~Gq~~~g------~~yAtEEqIeklveLaksa~k~ay~vPAdl 245 (358)
T 2b0j_A 206 PEM-----KGQVYIA------EGYASEEAVNKLYEIGKIARGKAFKMPANL 245 (358)
T ss_dssp TTT-----CCCEEEE------ESSSCHHHHHHHHHHHHHHHSCEEEEEHHH
T ss_pred CCC-----CCccccc------cccCCHHHHHHHHHHHHHhCCCeEecchhh
Confidence 875 3443221 122346789999999999999999999753
No 152
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=98.58 E-value=1.5e-07 Score=77.25 Aligned_cols=73 Identities=12% Similarity=0.106 Sum_probs=57.9
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCcee----cChhhHh---hcCCCEEEEecCchhHH
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFF----ADLNDLC---ELHPDVVLLSTSILSTQ 102 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~----~~~~~~~---~~~aDvVIlavp~~~~~ 102 (335)
..++|.|+|+|.+|..++..|.+.|++|+++|++++..+.+.+.|+... ++.+.+. ..++|+||+++|.+...
T Consensus 6 ~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~~~n 85 (140)
T 3fwz_A 6 ICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGYEA 85 (140)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSCHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCChHHH
Confidence 4568999999999999999999999999999999988877777787532 2222211 15799999999987643
No 153
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=98.58 E-value=2.1e-07 Score=87.66 Aligned_cols=92 Identities=14% Similarity=0.152 Sum_probs=66.3
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCC-eEEEEcCCCCcHHH-HHh-------CC----CceecChhhHhhcCCCEEEEec
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHHH-TLLVHSRSDHSPAV-RQQ-------LN----APFFADLNDLCELHPDVVLLST 96 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G~-~V~~~dr~~~~~~~-a~~-------~g----~~~~~~~~~~~~~~aDvVIlav 96 (335)
+.|||+|||+|.||..+|..|...|+ +|++||++++..+. +.+ .+ +..++++.+.+ ++||+||+++
T Consensus 8 ~~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~-~~aDiVi~a~ 86 (331)
T 1pzg_A 8 RRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAAL-TGADCVIVTA 86 (331)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHH-TTCSEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHh-CCCCEEEEcc
Confidence 35799999999999999999999998 99999999875543 111 11 22356777566 8999999998
Q ss_pred --Cch-------------------hHHHHHhhccccccCCccEEEEcCC
Q 044593 97 --SIL-------------------STQSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 97 --p~~-------------------~~~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
|.. .+.++.+.+. . ..++++++.++.
T Consensus 87 g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~-~-~~p~a~vi~~tN 133 (331)
T 1pzg_A 87 GLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIK-K-YCPKTFIIVVTN 133 (331)
T ss_dssp SCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHH-H-HCTTCEEEECCS
T ss_pred CCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHH-H-HCCCcEEEEEcC
Confidence 531 1456666664 3 347777776644
No 154
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=98.56 E-value=9.2e-08 Score=88.74 Aligned_cols=80 Identities=14% Similarity=0.281 Sum_probs=63.9
Q ss_pred CCCCCeEEEEcccHHHHH-HHHHHHH-cCCeEE-EEcCCCCcH-HHHHhCCCceecChhhHhhcCCCEEEEecCchhHHH
Q 044593 28 KSTSLKIAVIGFGNFGQF-LAKAFAR-HHHTLL-VHSRSDHSP-AVRQQLNAPFFADLNDLCELHPDVVLLSTSILSTQS 103 (335)
Q Consensus 28 ~~~~~kI~IIG~G~mG~s-iA~~L~~-~G~~V~-~~dr~~~~~-~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~~~~ 103 (335)
.|+++||+|||+|.||.. ++..|.+ .+++++ ++|++++.. +.+.+.|+..+++.++++ +++|+|++|+|.....+
T Consensus 3 ~M~~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~~~~~~~ll-~~~D~V~i~tp~~~h~~ 81 (308)
T 3uuw_A 3 AMKNIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTPNKVKREKICSDYRIMPFDSIESLA-KKCDCIFLHSSTETHYE 81 (308)
T ss_dssp --CCCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECSCHHHHHHHHHHHTCCBCSCHHHHH-TTCSEEEECCCGGGHHH
T ss_pred ccccCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCCcCCHHHHH-hcCCEEEEeCCcHhHHH
Confidence 456789999999999996 8888887 467776 789998765 445566887788899988 69999999999998777
Q ss_pred HHhhc
Q 044593 104 VLKSI 108 (335)
Q Consensus 104 vl~~l 108 (335)
++...
T Consensus 82 ~~~~a 86 (308)
T 3uuw_A 82 IIKIL 86 (308)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76654
No 155
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=98.56 E-value=2.4e-07 Score=86.12 Aligned_cols=110 Identities=14% Similarity=0.231 Sum_probs=69.8
Q ss_pred CeEEEEcccHHHHHHHHHHHHcCC--eEEEEcCCCCcHH-HHHhC--C------Ccee-cChhhHhhcCCCEEEEecCch
Q 044593 32 LKIAVIGFGNFGQFLAKAFARHHH--TLLVHSRSDHSPA-VRQQL--N------APFF-ADLNDLCELHPDVVLLSTSIL 99 (335)
Q Consensus 32 ~kI~IIG~G~mG~siA~~L~~~G~--~V~~~dr~~~~~~-~a~~~--g------~~~~-~~~~~~~~~~aDvVIlavp~~ 99 (335)
|||+|||+|.||+++|..|...|+ +|+++|++++..+ .+.+. + .... ++.+ .+ ++||+||++++..
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~-a~-~~aDvVIi~~~~~ 78 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHGGHS-EL-ADAQVVILTAGAN 78 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEEECGG-GG-TTCSEEEECC---
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEECCHH-Hh-CCCCEEEEcCCCC
Confidence 699999999999999999999998 9999999976433 12221 1 1121 3443 44 7999999999543
Q ss_pred h----------------HHHHHhhccccccCCccEEEEcCCCCchHHHHHHhhCCCCCceEec
Q 044593 100 S----------------TQSVLKSIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQDFDILCT 146 (335)
Q Consensus 100 ~----------------~~~vl~~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~~~~~v~~ 146 (335)
. +.++++++. +. .++++|+.++..-......+.+..+. .+++++
T Consensus 79 ~~~g~~r~dl~~~n~~i~~~i~~~i~-~~-~p~~~vi~~tNP~~~~~~~~~~~~~~-~rviG~ 138 (304)
T 2v6b_A 79 QKPGESRLDLLEKNADIFRELVPQIT-RA-APDAVLLVTSNPVDLLTDLATQLAPG-QPVIGS 138 (304)
T ss_dssp ---------CHHHHHHHHHHHHHHHH-HH-CSSSEEEECSSSHHHHHHHHHHHSCS-SCEEEC
T ss_pred CCCCCcHHHHHHhHHHHHHHHHHHHH-Hh-CCCeEEEEecCchHHHHHHHHHhCCh-hcEEeC
Confidence 2 256666664 33 57777776654333333445555543 355543
No 156
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=98.55 E-value=4.7e-07 Score=84.41 Aligned_cols=89 Identities=21% Similarity=0.318 Sum_probs=61.8
Q ss_pred CeEEEEcccHHHHHHHHHHHHc--CCeEEEEcCCCCcHHHHH---hCC---------CceecChhhHhhcCCCEEEEecC
Q 044593 32 LKIAVIGFGNFGQFLAKAFARH--HHTLLVHSRSDHSPAVRQ---QLN---------APFFADLNDLCELHPDVVLLSTS 97 (335)
Q Consensus 32 ~kI~IIG~G~mG~siA~~L~~~--G~~V~~~dr~~~~~~~a~---~~g---------~~~~~~~~~~~~~~aDvVIlavp 97 (335)
|||+|||+|.||.++|..|... |++|+++|++++..+... ..+ +..+++.++ + ++||+||+|+|
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~-l-~~aDvViiav~ 78 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYAD-T-ANSDIVIITAG 78 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-G-TTCSEEEECCS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEECCCHHH-H-CCCCEEEEeCC
Confidence 6999999999999999999985 789999999987554211 111 223456666 5 79999999997
Q ss_pred chh----------------HHHHHhhccccccCCccEEEEcCC
Q 044593 98 ILS----------------TQSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 98 ~~~----------------~~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
... +.++.+.+. +. .++++|+.+++
T Consensus 79 ~p~~~g~~r~dl~~~n~~i~~~i~~~i~-~~-~~~~~viv~tN 119 (310)
T 1guz_A 79 LPRKPGMTREDLLMKNAGIVKEVTDNIM-KH-SKNPIIIVVSN 119 (310)
T ss_dssp CCCCTTCCHHHHHHHHHHHHHHHHHHHH-HH-CSSCEEEECCS
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHH-Hh-CCCcEEEEEcC
Confidence 531 234445553 33 46666666643
No 157
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=98.55 E-value=9.9e-08 Score=90.31 Aligned_cols=82 Identities=20% Similarity=0.253 Sum_probs=65.3
Q ss_pred cCCCCCeEEEEcccHHHHHHHHHHHHc--CCeEE-EEcCCCCcH-HHHHhCCCceecChhhHhh-cCCCEEEEecCchhH
Q 044593 27 VKSTSLKIAVIGFGNFGQFLAKAFARH--HHTLL-VHSRSDHSP-AVRQQLNAPFFADLNDLCE-LHPDVVLLSTSILST 101 (335)
Q Consensus 27 ~~~~~~kI~IIG~G~mG~siA~~L~~~--G~~V~-~~dr~~~~~-~~a~~~g~~~~~~~~~~~~-~~aDvVIlavp~~~~ 101 (335)
..++++||+|||+|.||..++..+.+. +++++ ++|++++.. +.+.+.|+..+++.++++. .++|+|++|||+...
T Consensus 9 ~~~~~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h 88 (354)
T 3q2i_A 9 ITDRKIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGARGHASLTDMLAQTDADIVILTTPSGLH 88 (354)
T ss_dssp CCSSCEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHCCEEESCHHHHHHHCCCSEEEECSCGGGH
T ss_pred CCCCcceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEECCCcHHH
Confidence 344678999999999999999999987 67764 789998765 4456678877889988872 379999999999987
Q ss_pred HHHHhhc
Q 044593 102 QSVLKSI 108 (335)
Q Consensus 102 ~~vl~~l 108 (335)
.+++...
T Consensus 89 ~~~~~~a 95 (354)
T 3q2i_A 89 PTQSIEC 95 (354)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6666544
No 158
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=98.54 E-value=1.3e-07 Score=89.89 Aligned_cols=80 Identities=14% Similarity=0.213 Sum_probs=65.7
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHc-CCeEE-EEcCCCCcHHHHHhCCCceecChhhHhh-cCCCEEEEecCchhHHHHH
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARH-HHTLL-VHSRSDHSPAVRQQLNAPFFADLNDLCE-LHPDVVLLSTSILSTQSVL 105 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~-G~~V~-~~dr~~~~~~~a~~~g~~~~~~~~~~~~-~~aDvVIlavp~~~~~~vl 105 (335)
|+.+||+|||+|.||...+..+.+. +++|+ ++|++++..+.+.+.|+..+++.++++. .+.|+|++|||.....+++
T Consensus 3 m~~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~ 82 (359)
T 3e18_A 3 LKKYQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKREAAAQKGLKIYESYEAVLADEKVDAVLIATPNDSHKELA 82 (359)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHHHTTTCCBCSCHHHHHHCTTCCEEEECSCGGGHHHHH
T ss_pred CCcCcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHhcCCceeCCHHHHhcCCCCCEEEEcCCcHHHHHHH
Confidence 4567999999999999999999876 66775 6799987777677889888889998872 2799999999999876666
Q ss_pred hhc
Q 044593 106 KSI 108 (335)
Q Consensus 106 ~~l 108 (335)
...
T Consensus 83 ~~a 85 (359)
T 3e18_A 83 ISA 85 (359)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 159
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=98.53 E-value=3.8e-07 Score=85.22 Aligned_cols=91 Identities=20% Similarity=0.275 Sum_probs=69.8
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHc-C-CeEEEEcCCCCcHHHHHh----CCCc--eecChhhHhhcCCCEEEEecCchh
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARH-H-HTLLVHSRSDHSPAVRQQ----LNAP--FFADLNDLCELHPDVVLLSTSILS 100 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~-G-~~V~~~dr~~~~~~~a~~----~g~~--~~~~~~~~~~~~aDvVIlavp~~~ 100 (335)
...++|+|||+|.||.+++.+|.+. + .+|.+|||+ ...+.+.+ .|+. .. ++++++ .++|+||.|||...
T Consensus 119 ~~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~-~a~~la~~l~~~~g~~~~~~-~~~eav-~~aDIVi~aT~s~~ 195 (313)
T 3hdj_A 119 PRSSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY-ASPEILERIGRRCGVPARMA-APADIA-AQADIVVTATRSTT 195 (313)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT-CCHHHHHHHHHHHTSCEEEC-CHHHHH-HHCSEEEECCCCSS
T ss_pred CCCcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc-HHHHHHHHHHHhcCCeEEEe-CHHHHH-hhCCEEEEccCCCC
Confidence 3567999999999999999999874 3 589999999 65554443 3653 34 788887 78999999999753
Q ss_pred HHHHHhhccccccCCccEEEEcCCCCc
Q 044593 101 TQSVLKSIPFQRLKRSTLFVDVLSVKE 127 (335)
Q Consensus 101 ~~~vl~~l~~~~l~~~~iVvd~~SvK~ 127 (335)
.++. ...+++|++|++++|.+.
T Consensus 196 --pvl~---~~~l~~G~~V~~vGs~~p 217 (313)
T 3hdj_A 196 --PLFA---GQALRAGAFVGAIGSSLP 217 (313)
T ss_dssp --CSSC---GGGCCTTCEEEECCCSST
T ss_pred --cccC---HHHcCCCcEEEECCCCCC
Confidence 2222 245889999999998765
No 160
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=98.52 E-value=1e-07 Score=91.77 Aligned_cols=89 Identities=20% Similarity=0.217 Sum_probs=68.7
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCcee-----------------------------cC
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFF-----------------------------AD 80 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~-----------------------------~~ 80 (335)
...||+|||+|.||...++.++..|.+|+++|+++...+.+.+.|..+. .+
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~~ 268 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAAL 268 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHhH
Confidence 4679999999999999999999999999999999988777777776421 13
Q ss_pred hhhHhhcCCCEEEEec--Cchh-----HHHHHhhccccccCCccEEEEcCC
Q 044593 81 LNDLCELHPDVVLLST--SILS-----TQSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 81 ~~~~~~~~aDvVIlav--p~~~-----~~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
+.+++ .++|+||.|+ |... ..+.++ .+++|.+|+|++.
T Consensus 269 l~e~l-~~aDVVI~tvlipg~~ap~Lvt~emv~-----~Mk~GsVIVDvA~ 313 (405)
T 4dio_A 269 VAEHI-AKQDIVITTALIPGRPAPRLVTREMLD-----SMKPGSVVVDLAV 313 (405)
T ss_dssp HHHHH-HTCSEEEECCCCSSSCCCCCBCHHHHT-----TSCTTCEEEETTG
T ss_pred HHHHh-cCCCEEEECCcCCCCCCCEEecHHHHh-----cCCCCCEEEEEeC
Confidence 44555 7999999985 4322 233333 4679999999974
No 161
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=98.52 E-value=3.4e-07 Score=85.27 Aligned_cols=88 Identities=24% Similarity=0.350 Sum_probs=64.7
Q ss_pred CCCCeEEEEcccHHHHH-HHHHHHHc-CCeEE-EEcCCCCcHH-HHHhCCCceecChhhHhhcCCCEEEEecCchhHHHH
Q 044593 29 STSLKIAVIGFGNFGQF-LAKAFARH-HHTLL-VHSRSDHSPA-VRQQLNAPFFADLNDLCELHPDVVLLSTSILSTQSV 104 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~s-iA~~L~~~-G~~V~-~~dr~~~~~~-~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~~~~v 104 (335)
|+++||+|||+|.||.. ++..+.+. +++++ ++|++++..+ .+.+.|+..+++.+++. .++|+|++|+|.....++
T Consensus 3 m~~~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~l~-~~~D~V~i~tp~~~h~~~ 81 (319)
T 1tlt_A 3 LKKLRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPYADSLSSLA-ASCDAVFVHSSTASHFDV 81 (319)
T ss_dssp --CEEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCBCSSHHHHH-TTCSEEEECSCTTHHHHH
T ss_pred CCcceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCccCcHHHhh-cCCCEEEEeCCchhHHHH
Confidence 45689999999999996 88888764 67765 8899987654 45556777667777774 789999999999877666
Q ss_pred HhhccccccCCcc-EEEE
Q 044593 105 LKSIPFQRLKRST-LFVD 121 (335)
Q Consensus 105 l~~l~~~~l~~~~-iVvd 121 (335)
+... ++.|. ++++
T Consensus 82 ~~~a----l~~G~~v~~e 95 (319)
T 1tlt_A 82 VSTL----LNAGVHVCVD 95 (319)
T ss_dssp HHHH----HHTTCEEEEE
T ss_pred HHHH----HHcCCeEEEe
Confidence 6554 23444 5555
No 162
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=98.51 E-value=2.9e-07 Score=86.21 Aligned_cols=76 Identities=16% Similarity=0.303 Sum_probs=62.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHHc-CCeEE-EEcCCCCcH-HHHHhCCCceecChhhHhhc--CCCEEEEecCchhHHHHH
Q 044593 31 SLKIAVIGFGNFGQFLAKAFARH-HHTLL-VHSRSDHSP-AVRQQLNAPFFADLNDLCEL--HPDVVLLSTSILSTQSVL 105 (335)
Q Consensus 31 ~~kI~IIG~G~mG~siA~~L~~~-G~~V~-~~dr~~~~~-~~a~~~g~~~~~~~~~~~~~--~aDvVIlavp~~~~~~vl 105 (335)
++||+|||+|.||..++..|.+. +++++ ++|++++.. +.+.+.|+. +++.++++ . ++|+|++|||+....+++
T Consensus 3 ~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~-~~~~~~~l-~~~~~D~V~i~tp~~~h~~~~ 80 (331)
T 4hkt_A 3 TVRFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAYGCE-VRTIDAIE-AAADIDAVVICTPTDTHADLI 80 (331)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCE-ECCHHHHH-HCTTCCEEEECSCGGGHHHHH
T ss_pred ceEEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHhCCC-cCCHHHHh-cCCCCCEEEEeCCchhHHHHH
Confidence 57999999999999999999985 67775 689998764 456677888 88888887 4 799999999999877766
Q ss_pred hhc
Q 044593 106 KSI 108 (335)
Q Consensus 106 ~~l 108 (335)
...
T Consensus 81 ~~a 83 (331)
T 4hkt_A 81 ERF 83 (331)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 163
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=98.50 E-value=8.6e-08 Score=90.97 Aligned_cols=95 Identities=16% Similarity=0.139 Sum_probs=69.8
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHH-cC-CeEEEEcCCCCcHH-HHHhC----CC--ceecChhhHhhcCCCEEEEecCch
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFAR-HH-HTLLVHSRSDHSPA-VRQQL----NA--PFFADLNDLCELHPDVVLLSTSIL 99 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~-~G-~~V~~~dr~~~~~~-~a~~~----g~--~~~~~~~~~~~~~aDvVIlavp~~ 99 (335)
...++|+|||+|.||.+++.+|.. .+ .+|.+|||+++..+ .+.+. |+ ....+..+++ .++|+||.|||..
T Consensus 127 ~~~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~~~~a~~la~~~~~~~g~~~~~~~~~~eav-~~aDiVi~aTps~ 205 (350)
T 1x7d_A 127 PNARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSVAEAV-KGVDIITTVTADK 205 (350)
T ss_dssp TTCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSSHHHHH-TTCSEEEECCCCS
T ss_pred ccCCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHhccCceEEEeCCHHHHH-hcCCEEEEeccCC
Confidence 356799999999999999998864 33 58999999987653 33332 53 3456777877 7899999999986
Q ss_pred hHHHHHhhccccccCCccEEEEcCCCCc
Q 044593 100 STQSVLKSIPFQRLKRSTLFVDVLSVKE 127 (335)
Q Consensus 100 ~~~~vl~~l~~~~l~~~~iVvd~~SvK~ 127 (335)
....++. ...+++|+.|+++++.+.
T Consensus 206 ~~~pvl~---~~~l~~G~~V~~vgs~~p 230 (350)
T 1x7d_A 206 AYATIIT---PDMLEPGMHLNAVGGDCP 230 (350)
T ss_dssp SEEEEEC---GGGCCTTCEEEECSCCBT
T ss_pred CCCceec---HHHcCCCCEEEECCCCCC
Confidence 3222222 135789999999998653
No 164
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=98.50 E-value=3e-07 Score=86.56 Aligned_cols=78 Identities=15% Similarity=0.239 Sum_probs=64.1
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHc-CCeEE-EEcCCCCcH-HHHHhCCCceecChhhHhhc--CCCEEEEecCchhHHHH
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARH-HHTLL-VHSRSDHSP-AVRQQLNAPFFADLNDLCEL--HPDVVLLSTSILSTQSV 104 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~-G~~V~-~~dr~~~~~-~~a~~~g~~~~~~~~~~~~~--~aDvVIlavp~~~~~~v 104 (335)
+++||+|||+|.||..++..|.+. +++|+ ++|++++.. +.+.+.|+..+++.++++ . ++|+|++|+|.....++
T Consensus 3 ~~~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~~l-~~~~~D~V~i~tp~~~h~~~ 81 (344)
T 3euw_A 3 LTLRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEANGAEAVASPDEVF-ARDDIDGIVIGSPTSTHVDL 81 (344)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHTTTCEEESSHHHHT-TCSCCCEEEECSCGGGHHHH
T ss_pred CceEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCceeCCHHHHh-cCCCCCEEEEeCCchhhHHH
Confidence 357999999999999999999986 66765 789998765 446667877788999887 5 79999999999987776
Q ss_pred Hhhc
Q 044593 105 LKSI 108 (335)
Q Consensus 105 l~~l 108 (335)
+...
T Consensus 82 ~~~a 85 (344)
T 3euw_A 82 ITRA 85 (344)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6654
No 165
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=98.48 E-value=4.3e-08 Score=90.05 Aligned_cols=95 Identities=18% Similarity=0.142 Sum_probs=64.1
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCC-eEEEEcCCCCcHHHHHhCCCc--eecChhhHhhcCCCEEEEecCchhHHHHHh
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHHH-TLLVHSRSDHSPAVRQQLNAP--FFADLNDLCELHPDVVLLSTSILSTQSVLK 106 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G~-~V~~~dr~~~~~~~a~~~g~~--~~~~~~~~~~~~aDvVIlavp~~~~~~vl~ 106 (335)
..+++.|||+|.+|.+++..|.+.|+ +|++++|+++..+...+ ++. ...+..+.+ .++|+||.|||......+-.
T Consensus 116 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~-~~~~~~~~~~~~~~-~~aDiVInaTp~Gm~~~~~~ 193 (277)
T 3don_A 116 EDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSL-NINKINLSHAESHL-DEFDIIINTTPAGMNGNTDS 193 (277)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCS-CCEEECHHHHHHTG-GGCSEEEECCC-------CC
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH-hcccccHhhHHHHh-cCCCEEEECccCCCCCCCcC
Confidence 46799999999999999999999998 89999999865432211 221 123344545 68999999999864333211
Q ss_pred hccccccCCccEEEEcCCCC
Q 044593 107 SIPFQRLKRSTLFVDVLSVK 126 (335)
Q Consensus 107 ~l~~~~l~~~~iVvd~~SvK 126 (335)
.+....++++.+|+|+....
T Consensus 194 ~l~~~~l~~~~~V~D~vY~P 213 (277)
T 3don_A 194 VISLNRLASHTLVSDIVYNP 213 (277)
T ss_dssp SSCCTTCCSSCEEEESCCSS
T ss_pred CCCHHHcCCCCEEEEecCCC
Confidence 12224578999999997553
No 166
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=98.48 E-value=3.5e-08 Score=92.37 Aligned_cols=71 Identities=14% Similarity=0.203 Sum_probs=50.4
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCC--eEEEEcCCCCcHHH-HHh----C-----CCceecChhhHhhcCCCEEEEec
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHH--TLLVHSRSDHSPAV-RQQ----L-----NAPFFADLNDLCELHPDVVLLST 96 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~--~V~~~dr~~~~~~~-a~~----~-----g~~~~~~~~~~~~~~aDvVIlav 96 (335)
.+.+||+|||+|.||++++..++..|. +|+++|++++..+. +.+ . .+....+..+.+ ++||+||+|+
T Consensus 4 ~~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~~~~~al-~~aDvViia~ 82 (316)
T 1ldn_A 4 NGGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDC-RDADLVVICA 82 (316)
T ss_dssp TTSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGGT-TTCSEEEECC
T ss_pred CCCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEcCcHHHh-CCCCEEEEcC
Confidence 356899999999999999999998875 89999999753321 111 1 111222333445 7999999998
Q ss_pred Cchh
Q 044593 97 SILS 100 (335)
Q Consensus 97 p~~~ 100 (335)
|...
T Consensus 83 ~~~~ 86 (316)
T 1ldn_A 83 GANQ 86 (316)
T ss_dssp SCCC
T ss_pred CCCC
Confidence 7654
No 167
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=98.48 E-value=2.9e-07 Score=86.29 Aligned_cols=79 Identities=11% Similarity=0.195 Sum_probs=63.7
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHc-CCeEE-EEcCCCCcH-HHHHhCCC-ceecChhhHhhc--CCCEEEEecCchhHH
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARH-HHTLL-VHSRSDHSP-AVRQQLNA-PFFADLNDLCEL--HPDVVLLSTSILSTQ 102 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~-G~~V~-~~dr~~~~~-~~a~~~g~-~~~~~~~~~~~~--~aDvVIlavp~~~~~ 102 (335)
|+++||+|||+|.||..++..|.+. +++|+ ++|++++.. +.+.+.|+ ..+++.++++ . ++|+|++|||.....
T Consensus 3 m~~~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll-~~~~~D~V~i~tp~~~h~ 81 (330)
T 3e9m_A 3 LDKIRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAKELAIPVAYGSYEELC-KDETIDIIYIPTYNQGHY 81 (330)
T ss_dssp CCCEEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHHTTCCCCBSSHHHHH-HCTTCSEEEECCCGGGHH
T ss_pred CCeEEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHcCCCceeCCHHHHh-cCCCCCEEEEcCCCHHHH
Confidence 4568999999999999999999985 56765 679998764 45566787 4678888887 4 799999999999877
Q ss_pred HHHhhc
Q 044593 103 SVLKSI 108 (335)
Q Consensus 103 ~vl~~l 108 (335)
+++...
T Consensus 82 ~~~~~a 87 (330)
T 3e9m_A 82 SAAKLA 87 (330)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666554
No 168
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=98.47 E-value=3e-07 Score=87.07 Aligned_cols=82 Identities=12% Similarity=0.148 Sum_probs=63.3
Q ss_pred cCCCCCeEEEEcccHHHH-HHHHHHHHc-CCeEE-EEcCCCCcH-HHHHhCCCceecChhhHhh-cCCCEEEEecCchhH
Q 044593 27 VKSTSLKIAVIGFGNFGQ-FLAKAFARH-HHTLL-VHSRSDHSP-AVRQQLNAPFFADLNDLCE-LHPDVVLLSTSILST 101 (335)
Q Consensus 27 ~~~~~~kI~IIG~G~mG~-siA~~L~~~-G~~V~-~~dr~~~~~-~~a~~~g~~~~~~~~~~~~-~~aDvVIlavp~~~~ 101 (335)
..|+.+||+|||+|.||. .++..|.+. +++|+ ++|++++.. +.+.+.|+..+++.++++. .+.|+|++|||....
T Consensus 23 ~~m~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~~~h 102 (350)
T 3rc1_A 23 ANANPIRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFGGEPVEGYPALLERDDVDAVYVPLPAVLH 102 (350)
T ss_dssp ---CCEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHHCSEEEESHHHHHTCTTCSEEEECCCGGGH
T ss_pred CCCCceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEECCCcHHH
Confidence 446678999999999998 789999887 67765 779997654 4456678887788888872 268999999999987
Q ss_pred HHHHhhc
Q 044593 102 QSVLKSI 108 (335)
Q Consensus 102 ~~vl~~l 108 (335)
.+++...
T Consensus 103 ~~~~~~a 109 (350)
T 3rc1_A 103 AEWIDRA 109 (350)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7766654
No 169
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=98.47 E-value=3.1e-07 Score=87.17 Aligned_cols=85 Identities=19% Similarity=0.265 Sum_probs=62.7
Q ss_pred hcccCCCCCeEEEEcccHHHHHHHHHHH-H-cCCeEE-EEcCCCCcHH-HHHhCC--CceecChhhHhh-cCCCEEEEec
Q 044593 24 TQYVKSTSLKIAVIGFGNFGQFLAKAFA-R-HHHTLL-VHSRSDHSPA-VRQQLN--APFFADLNDLCE-LHPDVVLLST 96 (335)
Q Consensus 24 ~~~~~~~~~kI~IIG~G~mG~siA~~L~-~-~G~~V~-~~dr~~~~~~-~a~~~g--~~~~~~~~~~~~-~~aDvVIlav 96 (335)
.+..+|+++||+|||+|.||..++..|. + .+++++ ++|++++..+ .+.+.| ...+++.++++. .++|+|++||
T Consensus 16 ~~~~~m~~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~ll~~~~~D~V~i~t 95 (357)
T 3ec7_A 16 NLYFQGMTLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALDKYAIEAKDYNDYHDLINDKDVEVVIITA 95 (357)
T ss_dssp ------CCEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTHHHHHHHHHTCCCEEESSHHHHHHCTTCCEEEECS
T ss_pred ccccCCCeeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEEcC
Confidence 4445667789999999999999999998 4 367765 7899988654 455667 557788888872 2599999999
Q ss_pred CchhHHHHHhhc
Q 044593 97 SILSTQSVLKSI 108 (335)
Q Consensus 97 p~~~~~~vl~~l 108 (335)
|.....+++...
T Consensus 96 p~~~h~~~~~~a 107 (357)
T 3ec7_A 96 SNEAHADVAVAA 107 (357)
T ss_dssp CGGGHHHHHHHH
T ss_pred CcHHHHHHHHHH
Confidence 999877766654
No 170
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=98.46 E-value=8.7e-07 Score=73.33 Aligned_cols=104 Identities=13% Similarity=0.032 Sum_probs=72.1
Q ss_pred CCeEEEEcc----cHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCchhHHHHHh
Q 044593 31 SLKIAVIGF----GNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILSTQSVLK 106 (335)
Q Consensus 31 ~~kI~IIG~----G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~~~~vl~ 106 (335)
..+|+|||+ |.+|..++..|.+.|++|+.++++.+. -.|+..+.++.++. ..+|++++++|.....++++
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~Vnp~~~~-----i~G~~~y~sl~~l~-~~vDlvvi~vp~~~~~~vv~ 95 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEE-----VLGRKCYPSVLDIP-DKIEVVDLFVKPKLTMEYVE 95 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSE-----ETTEECBSSGGGCS-SCCSEEEECSCHHHHHHHHH
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCCCEEEEECCCCCe-----ECCeeccCCHHHcC-CCCCEEEEEeCHHHHHHHHH
Confidence 568999999 799999999999999985555443221 14777778888886 68999999999999999998
Q ss_pred hccccccCCccEEEEcCCCCchHHHHHHhhCCCCCceEe
Q 044593 107 SIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQDFDILC 145 (335)
Q Consensus 107 ~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~~~~~v~ 145 (335)
++.. ...+.+++..+.......+.+++ .+.++++
T Consensus 96 ~~~~--~gi~~i~~~~g~~~~~l~~~a~~---~Gi~vvG 129 (144)
T 2d59_A 96 QAIK--KGAKVVWFQYNTYNREASKKADE---AGLIIVA 129 (144)
T ss_dssp HHHH--HTCSEEEECTTCCCHHHHHHHHH---TTCEEEE
T ss_pred HHHH--cCCCEEEECCCchHHHHHHHHHH---cCCEEEc
Confidence 7742 33345665544332222222222 3566665
No 171
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=98.45 E-value=1.6e-07 Score=89.68 Aligned_cols=91 Identities=15% Similarity=0.237 Sum_probs=67.3
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCC------ceecChhhHhhcCCCEEEEecCchhHH
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNA------PFFADLNDLCELHPDVVLLSTSILSTQ 102 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~------~~~~~~~~~~~~~aDvVIlavp~~~~~ 102 (335)
...+||+|||+|.||..++..|.+. ++|+++||+++..+...+... ....++.+++ +++|+||.|+|.....
T Consensus 14 ~~~~~v~IiGaG~iG~~ia~~L~~~-~~V~V~~R~~~~a~~la~~~~~~~~d~~~~~~l~~ll-~~~DvVIn~~P~~~~~ 91 (365)
T 2z2v_A 14 GRHMKVLILGAGNIGRAIAWDLKDE-FDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVM-KEFELVIGALPGFLGF 91 (365)
T ss_dssp --CCEEEEECCSHHHHHHHHHHTTT-SEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHH-TTCSCEEECCCHHHHH
T ss_pred CCCCeEEEEcCCHHHHHHHHHHHcC-CeEEEEECCHHHHHHHHhhCCeEEEecCCHHHHHHHH-hCCCEEEECCChhhhH
Confidence 4578999999999999999999988 999999999876654433221 1123345566 7899999999988655
Q ss_pred HHHhhccccccCCccEEEEcCCC
Q 044593 103 SVLKSIPFQRLKRSTLFVDVLSV 125 (335)
Q Consensus 103 ~vl~~l~~~~l~~~~iVvd~~Sv 125 (335)
.++.. .++.|+.++|++..
T Consensus 92 ~v~~a----~l~~G~~~vD~s~~ 110 (365)
T 2z2v_A 92 KSIKA----AIKSKVDMVDVSFM 110 (365)
T ss_dssp HHHHH----HHHTTCCEEECCCC
T ss_pred HHHHH----HHHhCCeEEEccCC
Confidence 55543 35678889998764
No 172
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=98.44 E-value=8.2e-07 Score=82.51 Aligned_cols=226 Identities=13% Similarity=0.116 Sum_probs=120.4
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHc-CCeEE-EEcCCCCcHHHHHhCCCce--ecChhhHhhcCCCEEEEecCchhHHHH
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARH-HHTLL-VHSRSDHSPAVRQQLNAPF--FADLNDLCELHPDVVLLSTSILSTQSV 104 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~-G~~V~-~~dr~~~~~~~a~~~g~~~--~~~~~~~~~~~aDvVIlavp~~~~~~v 104 (335)
|+.+||+|||+|.||..++..+.+. +++++ ++|++++..+. .|+.+ ..++.+. .++|+||+|+|.....++
T Consensus 7 M~~irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~~~~~~~~---~g~~~~~~~~l~~~--~~~DvViiatp~~~h~~~ 81 (304)
T 3bio_A 7 DKKIRAAIVGYGNIGRYALQALREAPDFEIAGIVRRNPAEVPF---ELQPFRVVSDIEQL--ESVDVALVCSPSREVERT 81 (304)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC----------CCTTSCEESSGGGS--SSCCEEEECSCHHHHHHH
T ss_pred CCCCEEEEECChHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHH---cCCCcCCHHHHHhC--CCCCEEEECCCchhhHHH
Confidence 5568999999999999999999874 56876 68999876542 56542 3344333 579999999999887776
Q ss_pred HhhccccccCCccEEEEcCCC-Cch--HHHHHHhhCC-CCCceEeccccCCCCCc------ccccCCCcceecccccCCC
Q 044593 105 LKSIPFQRLKRSTLFVDVLSV-KEF--PRNLFLKYLP-QDFDILCTHPMFGPESA------KSSWENLPFMYDKVRIGND 174 (335)
Q Consensus 105 l~~l~~~~l~~~~iVvd~~Sv-K~~--~~~~l~~~l~-~~~~~v~~HPmaG~~~~------~~~~~g~~~i~~~~~~~~~ 174 (335)
+... ++.|..|++.... ... ....+.+... .+..+..+| -+.|... .++.-|....+. .+.++.
T Consensus 82 ~~~a----l~aG~~Vi~ekP~~a~~~~~~~~l~~~a~~~g~~~~v~~-~~~p~~~~~~~~i~~g~lG~~~~~~-~~~~~~ 155 (304)
T 3bio_A 82 ALEI----LKKGICTADSFDIHDGILALRRSLGDAAGKSGAAAVIAS-GWDPGSDSVVRTLMQAIVPKGITYT-NFGPGM 155 (304)
T ss_dssp HHHH----HTTTCEEEECCCCGGGHHHHHHHHHHHHHHHTCEEECSC-BBTTBHHHHHHHHHHHHSCEEEEEE-EECSEE
T ss_pred HHHH----HHcCCeEEECCCCCCCCHHHHHHHHHHHHhCCCEEEEeC-CCCHHHHHHHHHHHCCCCCCcEEEE-EeCCCc
Confidence 6654 3456677765322 211 1112222111 132333333 2222221 011112211111 011111
Q ss_pred hhHHHHHHHHHHHHHhc-----------------CCEEEEeChHHH---HHHHHHhhhhHHHHHHHHHHc-CCC----CC
Q 044593 175 EERIKRVDKFLDVFAKE-----------------GCRMVEMSCFDH---DKYAAGSQFVTHTMGRVLERF-GVE----SS 229 (335)
Q Consensus 175 ~~~~~~~~~v~~l~~~~-----------------G~~v~~~~~~eH---D~~~A~~s~lph~la~aL~~~-~~~----~~ 229 (335)
..... ..|+.+ ..+.+++..++| +.+.+.+++.| .++..+.+. ..+ ..
T Consensus 156 --~~~~~----~~~r~~~g~~~~~~~~~p~~~~~h~~~~~~~~~~~~~~~~v~~~i~~~p-~~~~~~~~~~~~ed~~~~~ 228 (304)
T 3bio_A 156 --SMGHT----VAVKAIDGVKAALSMTIPLGTGVHRRMVYVELLPGHNLEEVSAAIKADE-YFVHDETHVIQVDEVDALI 228 (304)
T ss_dssp --CHHHH----HHHHTSTTEEEEEEEEEECSTTCEEEEEEEEECTTCCHHHHHHHHHHST-TTTTSEEEEEECSCGGGGC
T ss_pred --chhhH----HHHHhCcCchheEEecCCCCCCcceeeEEEEEcCCCCHHHHHHHHhcCC-ccCCceeEEEEEeeeeeee
Confidence 11111 122221 233456666666 88999999999 544322211 111 12
Q ss_pred CCCCcchhhHHHHHHHhhCCCh----HhHHHHHhhCHhH-HHHHHHHHHHHHHH
Q 044593 230 PINTKGYETLLDLVDNTKGDSF----DLYYGLFMYNKNS-LEQLQRLEMAFESI 278 (335)
Q Consensus 230 ~~~~~gf~~~~rl~~~ia~~~~----~lw~~I~~~N~~~-~~~l~~~~~~l~~l 278 (335)
.+..++| .++. ++.+| .+|.+|...|+.. .+.|..|.+.+-.+
T Consensus 229 ~~~~G~~--~~~~----~s~~~~~~~~~e~~i~~~N~~~~~~~l~~~~~~~~~~ 276 (304)
T 3bio_A 229 DMGHGVR--MVRK----GVSGSTQNQRMSFDMEINNPALTGQVLVCAARAAMRQ 276 (304)
T ss_dssp CCEEEEE--EEEE----EEETTEEEEEEEEEEEEEHHHHHHHHHHHHHHHHTTS
T ss_pred ccCCceE--EEEE----ecccCcCCceEEEEEecCCHHHHHHHHHHHHHHHhhc
Confidence 3455666 3332 44566 8999999999987 58888888876655
No 173
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=98.42 E-value=5.8e-07 Score=74.10 Aligned_cols=106 Identities=11% Similarity=0.099 Sum_probs=72.6
Q ss_pred CCeEEEEcc----cHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCchhHHHHHh
Q 044593 31 SLKIAVIGF----GNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILSTQSVLK 106 (335)
Q Consensus 31 ~~kI~IIG~----G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~~~~vl~ 106 (335)
..+|+|||+ |.+|..+++.|.+.|++|+ ++|+.... ..-.|+..+.++.++. ...|++++++|...+.++++
T Consensus 13 p~~vaVvGas~~~g~~G~~~~~~l~~~G~~v~--~vnp~~~~-~~i~G~~~~~sl~el~-~~vDlavi~vp~~~~~~v~~ 88 (140)
T 1iuk_A 13 AKTIAVLGAHKDPSRPAHYVPRYLREQGYRVL--PVNPRFQG-EELFGEEAVASLLDLK-EPVDILDVFRPPSALMDHLP 88 (140)
T ss_dssp CCEEEEETCCSSTTSHHHHHHHHHHHTTCEEE--EECGGGTT-SEETTEECBSSGGGCC-SCCSEEEECSCHHHHTTTHH
T ss_pred CCEEEEECCCCCCCChHHHHHHHHHHCCCEEE--EeCCCccc-CcCCCEEecCCHHHCC-CCCCEEEEEeCHHHHHHHHH
Confidence 568999999 8999999999999999854 44544210 0114777778888886 68999999999998888887
Q ss_pred hccccccCCccEEEEcCCCCchHHHHHHhhCCCCCceEe
Q 044593 107 SIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQDFDILC 145 (335)
Q Consensus 107 ~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~~~~~v~ 145 (335)
++.. ...+.+|+..+.......+..++ .+.++++
T Consensus 89 ~~~~--~gi~~i~~~~g~~~~~~~~~a~~---~Gir~vg 122 (140)
T 1iuk_A 89 EVLA--LRPGLVWLQSGIRHPEFEKALKE---AGIPVVA 122 (140)
T ss_dssp HHHH--HCCSCEEECTTCCCHHHHHHHHH---TTCCEEE
T ss_pred HHHH--cCCCEEEEcCCcCHHHHHHHHHH---cCCEEEc
Confidence 7642 33345676655443223233322 3566775
No 174
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=98.41 E-value=7.9e-07 Score=86.19 Aligned_cols=91 Identities=14% Similarity=0.150 Sum_probs=71.5
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCchhH--HHHHh
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILST--QSVLK 106 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~~--~~vl~ 106 (335)
..+++|+|||+|.||..+|+.++..|.+|+++|+++.....+...|+.. .++++++ .++|+|+.+++...+ .+.+
T Consensus 245 L~GKTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~~~G~~v-v~LeElL-~~ADIVv~atgt~~lI~~e~l- 321 (464)
T 3n58_A 245 MAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAAMDGFEV-VTLDDAA-STADIVVTTTGNKDVITIDHM- 321 (464)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEE-CCHHHHG-GGCSEEEECCSSSSSBCHHHH-
T ss_pred ccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCcchhhHHHhcCcee-ccHHHHH-hhCCEEEECCCCccccCHHHH-
Confidence 4678999999999999999999999999999999886544455667654 4678887 899999998764432 2333
Q ss_pred hccccccCCccEEEEcCCCC
Q 044593 107 SIPFQRLKRSTLFVDVLSVK 126 (335)
Q Consensus 107 ~l~~~~l~~~~iVvd~~SvK 126 (335)
..++++++|++++...
T Consensus 322 ----~~MK~GAILINvGRgd 337 (464)
T 3n58_A 322 ----RKMKDMCIVGNIGHFD 337 (464)
T ss_dssp ----HHSCTTEEEEECSSST
T ss_pred ----hcCCCCeEEEEcCCCC
Confidence 3467999999998654
No 175
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=98.41 E-value=3e-07 Score=74.57 Aligned_cols=92 Identities=17% Similarity=0.268 Sum_probs=60.7
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCcee----cChhhH----hhcCCCEEEEecCch-h
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFF----ADLNDL----CELHPDVVLLSTSIL-S 100 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~----~~~~~~----~~~~aDvVIlavp~~-~ 100 (335)
++++|.|+|+|.+|..++..|.+.|++|+++|++++..+.+.+.+.... .+.+.+ . .++|+||.|++.+ .
T Consensus 5 ~~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~-~~~d~vi~~~~~~~~ 83 (144)
T 2hmt_A 5 KNKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGI-RNFEYVIVAIGANIQ 83 (144)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTG-GGCSEEEECCCSCHH
T ss_pred cCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCC-CCCCEEEECCCCchH
Confidence 4568999999999999999999999999999998766554444454321 222221 3 5799999999975 3
Q ss_pred HH-HHHhhccccccCCccEEEEcCC
Q 044593 101 TQ-SVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 101 ~~-~vl~~l~~~~l~~~~iVvd~~S 124 (335)
.. .+.... ..+.+..+|+-+.+
T Consensus 84 ~~~~~~~~~--~~~~~~~ii~~~~~ 106 (144)
T 2hmt_A 84 ASTLTTLLL--KELDIPNIWVKAQN 106 (144)
T ss_dssp HHHHHHHHH--HHTTCSEEEEECCS
T ss_pred HHHHHHHHH--HHcCCCeEEEEeCC
Confidence 32 233222 12344555555443
No 176
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=98.41 E-value=1.3e-06 Score=81.99 Aligned_cols=90 Identities=16% Similarity=0.177 Sum_probs=63.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHHcCC-eEEEEcCCCCcHHH-HHh---------CC--CceecChhhHhhcCCCEEEEec-
Q 044593 31 SLKIAVIGFGNFGQFLAKAFARHHH-TLLVHSRSDHSPAV-RQQ---------LN--APFFADLNDLCELHPDVVLLST- 96 (335)
Q Consensus 31 ~~kI~IIG~G~mG~siA~~L~~~G~-~V~~~dr~~~~~~~-a~~---------~g--~~~~~~~~~~~~~~aDvVIlav- 96 (335)
++||+|||+|.||..+|..|...|+ +|+++|++++..+. +.. .. +..+++. +.+ ++||+||+++
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al-~~aD~Vi~a~g 81 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY-DDL-AGADVVIVTAG 81 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG-GGG-TTCSEEEECCS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHh-CCCCEEEEeCC
Confidence 5799999999999999999999998 99999999875431 111 11 2234666 445 8999999998
Q ss_pred -Cch-------------------hHHHHHhhccccccCCccEEEEcCC
Q 044593 97 -SIL-------------------STQSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 97 -p~~-------------------~~~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
|.. ...++.+++. .. .++++++.+++
T Consensus 82 ~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~-~~-~p~a~iiv~tN 127 (322)
T 1t2d_A 82 FTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIK-KN-CPNAFIIVVTN 127 (322)
T ss_dssp CSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHH-HH-CTTSEEEECSS
T ss_pred CCCCCCCCcccccHHHHHHHHHHHHHHHHHHHH-HH-CCCeEEEEecC
Confidence 421 2455666663 33 46777766543
No 177
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=98.38 E-value=2.3e-07 Score=84.82 Aligned_cols=91 Identities=18% Similarity=0.110 Sum_probs=65.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCchhHHHHHhhccc
Q 044593 31 SLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILSTQSVLKSIPF 110 (335)
Q Consensus 31 ~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~~~~vl~~l~~ 110 (335)
.+++.|||+|.+|.+++..|.+.|.+|++++|+++..+...+.|+... +.+++ .++|+||.|||...... ..+..
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ka~~la~~~~~~~-~~~~l--~~~DiVInaTp~Gm~~~--~~l~~ 192 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSSRGLDFFQRLGCDCF-MEPPK--SAFDLIINATSASLHNE--LPLNK 192 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTHHHHHHHTCEEE-SSCCS--SCCSEEEECCTTCCCCS--CSSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEe-cHHHh--ccCCEEEEcccCCCCCC--CCCCh
Confidence 789999999999999999999999999999999876543326665432 33444 47999999999763211 01111
Q ss_pred c----ccCCccEEEEcCCCC
Q 044593 111 Q----RLKRSTLFVDVLSVK 126 (335)
Q Consensus 111 ~----~l~~~~iVvd~~SvK 126 (335)
. .++++.+|+|+....
T Consensus 193 ~~l~~~l~~~~~v~D~vY~P 212 (269)
T 3phh_A 193 EVLKGYFKEGKLAYDLAYGF 212 (269)
T ss_dssp HHHHHHHHHCSEEEESCCSS
T ss_pred HHHHhhCCCCCEEEEeCCCC
Confidence 1 356788999997653
No 178
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=98.38 E-value=3.3e-07 Score=88.54 Aligned_cols=92 Identities=16% Similarity=0.186 Sum_probs=70.9
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCchh-H-HHHHh
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILS-T-QSVLK 106 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~-~-~~vl~ 106 (335)
..+++|+|+|+|.||..+|..++..|.+|+++|+++.....+...|... .++++++ .++|+||+|+.... + .+.+.
T Consensus 218 L~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~~G~~v-~~Leeal-~~ADIVi~atgt~~lI~~e~l~ 295 (435)
T 3gvp_A 218 FGGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQACMDGFRL-VKLNEVI-RQVDIVITCTGNKNVVTREHLD 295 (435)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE-CCHHHHT-TTCSEEEECSSCSCSBCHHHHH
T ss_pred ecCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHHHcCCEe-ccHHHHH-hcCCEEEECCCCcccCCHHHHH
Confidence 3678999999999999999999999999999999986554566667643 4678887 89999999743222 1 23333
Q ss_pred hccccccCCccEEEEcCCCCc
Q 044593 107 SIPFQRLKRSTLFVDVLSVKE 127 (335)
Q Consensus 107 ~l~~~~l~~~~iVvd~~SvK~ 127 (335)
.++++.+|++++..+.
T Consensus 296 -----~MK~gailINvgrg~~ 311 (435)
T 3gvp_A 296 -----RMKNSCIVCNMGHSNT 311 (435)
T ss_dssp -----HSCTTEEEEECSSTTT
T ss_pred -----hcCCCcEEEEecCCCc
Confidence 4678999999986654
No 179
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=98.37 E-value=7e-07 Score=83.62 Aligned_cols=79 Identities=18% Similarity=0.217 Sum_probs=60.2
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcC-CeE-EEEcCCCCcH-HHHHhCCCc-eecChhhHhhc--CCCEEEEecCchhHH
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHH-HTL-LVHSRSDHSP-AVRQQLNAP-FFADLNDLCEL--HPDVVLLSTSILSTQ 102 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G-~~V-~~~dr~~~~~-~~a~~~g~~-~~~~~~~~~~~--~aDvVIlavp~~~~~ 102 (335)
|+++||+|||+|.||..++..+.+.+ .++ .++|++++.. +.+.+.|+. .+++.++++ . ++|+|++|||.....
T Consensus 3 m~~~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll-~~~~~D~V~i~tp~~~h~ 81 (329)
T 3evn_A 3 LSKVRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQAFANKYHLPKAYDKLEDML-ADESIDVIYVATINQDHY 81 (329)
T ss_dssp --CEEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCSSTTCC---CCCCSCEESCHHHHH-TCTTCCEEEECSCGGGHH
T ss_pred CCceEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHh-cCCCCCEEEECCCcHHHH
Confidence 45689999999999999999998764 565 4779998754 445667875 678888887 5 799999999999877
Q ss_pred HHHhhc
Q 044593 103 SVLKSI 108 (335)
Q Consensus 103 ~vl~~l 108 (335)
+++...
T Consensus 82 ~~~~~a 87 (329)
T 3evn_A 82 KVAKAA 87 (329)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666554
No 180
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=98.37 E-value=4.6e-07 Score=85.33 Aligned_cols=77 Identities=22% Similarity=0.373 Sum_probs=61.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHHc-CCeEE-EEcCCCCcH-HHHHhCCCc-eecChhhHhhc--CCCEEEEecCchhHHHH
Q 044593 31 SLKIAVIGFGNFGQFLAKAFARH-HHTLL-VHSRSDHSP-AVRQQLNAP-FFADLNDLCEL--HPDVVLLSTSILSTQSV 104 (335)
Q Consensus 31 ~~kI~IIG~G~mG~siA~~L~~~-G~~V~-~~dr~~~~~-~~a~~~g~~-~~~~~~~~~~~--~aDvVIlavp~~~~~~v 104 (335)
++||+|||+|.||..++..|.+. +++++ ++|++++.. +.+.+.|+. .+++.++++ . ++|+|++|||+....++
T Consensus 2 ~~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll-~~~~~D~V~i~tp~~~h~~~ 80 (344)
T 3ezy_A 2 SLRIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEKLGVEKAYKDPHELI-EDPNVDAVLVCSSTNTHSEL 80 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHHTCSEEESSHHHHH-HCTTCCEEEECSCGGGHHHH
T ss_pred eeEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHhCCCceeCCHHHHh-cCCCCCEEEEcCCCcchHHH
Confidence 46999999999999999999875 56765 689998764 445566774 678888887 4 79999999999987766
Q ss_pred Hhhc
Q 044593 105 LKSI 108 (335)
Q Consensus 105 l~~l 108 (335)
+...
T Consensus 81 ~~~a 84 (344)
T 3ezy_A 81 VIAC 84 (344)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6554
No 181
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=98.36 E-value=7e-07 Score=85.52 Aligned_cols=91 Identities=16% Similarity=0.170 Sum_probs=68.3
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHh-CCCce------ecChhhHhhcCCCEEEEecCchh
Q 044593 28 KSTSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQ-LNAPF------FADLNDLCELHPDVVLLSTSILS 100 (335)
Q Consensus 28 ~~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~-~g~~~------~~~~~~~~~~~aDvVIlavp~~~ 100 (335)
....++|+|||+|.||..+++.++..|++|+++|++++..+.+.+ .|... ..++.+++ .++|+||.|++...
T Consensus 165 ~l~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l-~~aDvVi~~~~~p~ 243 (377)
T 2vhw_A 165 GVEPADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAV-KRADLVIGAVLVPG 243 (377)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHH-HHCSEEEECCCCTT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHH-cCCCEEEECCCcCC
Confidence 346789999999999999999999999999999999877655554 56532 22345555 68999999885433
Q ss_pred -------HHHHHhhccccccCCccEEEEcCC
Q 044593 101 -------TQSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 101 -------~~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
..+.+ ..++++.+|+|++.
T Consensus 244 ~~t~~li~~~~l-----~~mk~g~~iV~va~ 269 (377)
T 2vhw_A 244 AKAPKLVSNSLV-----AHMKPGAVLVDIAI 269 (377)
T ss_dssp SCCCCCBCHHHH-----TTSCTTCEEEEGGG
T ss_pred CCCcceecHHHH-----hcCCCCcEEEEEec
Confidence 23333 24678899999974
No 182
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=98.36 E-value=2e-06 Score=82.82 Aligned_cols=164 Identities=13% Similarity=0.091 Sum_probs=107.6
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCC------CCcHHHHHhCCCceecChhhHhhcCCCEEEEecCchhH
Q 044593 28 KSTSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRS------DHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILST 101 (335)
Q Consensus 28 ~~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~------~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~~ 101 (335)
-.+++||+|||+|.-|.+-|..|+..|.+|++--|. ..+.+.|.+.|..+. +..+++ +.+|+|++-+|+..-
T Consensus 34 ~lkgK~IaVIGyGsQG~AqAlNLRDSGv~V~Vglr~~s~~e~~~S~~~A~~~Gf~v~-~~~eA~-~~ADvV~~L~PD~~q 111 (491)
T 3ulk_A 34 YLQGKKVVIVGCGAQGLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFKVG-TYEELI-PQADLVINLTPDKQH 111 (491)
T ss_dssp GGTTSEEEEESCSHHHHHHHHHHHHTTCEEEEEECHHHHHTTCHHHHHHHHTTCEEE-EHHHHG-GGCSEEEECSCGGGH
T ss_pred HHcCCEEEEeCCChHhHHHHhHHHhcCCcEEEEeCCCCcccccchHHHHHHCCCEec-CHHHHH-HhCCEEEEeCChhhH
Confidence 346899999999999999999999999999876652 134567888898765 466777 899999999999999
Q ss_pred HHHHhhccccccCCccEEEEcCCCCchHHHHHHhhCCCCCceEeccccCCCCCccccc---CCCcceeccccc-CCChhH
Q 044593 102 QSVLKSIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQDFDILCTHPMFGPESAKSSW---ENLPFMYDKVRI-GNDEER 177 (335)
Q Consensus 102 ~~vl~~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~~~~~v~~HPmaG~~~~~~~~---~g~~~i~~~~~~-~~~~~~ 177 (335)
..+.+++. |.+++|..+.=.-+ .-+..-.-..|.++.++-.-|=...+.-.+.| .|.|.++. +. ..|. +
T Consensus 112 ~~vy~~I~-p~lk~G~~L~faHG---FnI~~~~i~pp~dvdVimVAPKgpG~~VR~~y~~G~GvP~liA--VhqeqD~-s 184 (491)
T 3ulk_A 112 SDVVRTVQ-PLMKDGAALGYSHG---FNIVEVGEQIRKDITVVMVAPKCPGTEVREEYKRGFGVPTLIA--VHPENDP-K 184 (491)
T ss_dssp HHHHHHHG-GGSCTTCEEEESSC---HHHHTTCCCCCTTSEEEEEEESSCHHHHHHHHHTTCCCCEEEE--ECGGGCT-T
T ss_pred HHHHHHHH-hhCCCCCEEEecCc---ccccccccccCCCcceEEeCCCCCcHHHHHHHHcCCCCceEEE--EEeCCCC-c
Confidence 99999985 89999988774332 21111111235566766555543221100111 46777663 11 0111 1
Q ss_pred HHHHHHHHHHHHhcCCE---EEEeCh
Q 044593 178 IKRVDKFLDVFAKEGCR---MVEMSC 200 (335)
Q Consensus 178 ~~~~~~v~~l~~~~G~~---v~~~~~ 200 (335)
-.+.+....+...+|+. ++.++-
T Consensus 185 G~a~~~AlayA~aiG~~raGvieTTF 210 (491)
T 3ulk_A 185 GEGMAIAKAWAAATGGHRAGVLESSF 210 (491)
T ss_dssp SCHHHHHHHHHHHHTGGGTCEEECCH
T ss_pred hhHHHHHHHHHHhcCCCcCceeeccH
Confidence 12345555677778753 677764
No 183
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=98.35 E-value=4.7e-07 Score=85.60 Aligned_cols=80 Identities=18% Similarity=0.289 Sum_probs=63.3
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHc-CCeE-EEEcCCCCcH-HHHHhCCCceecChhhHhh-cCCCEEEEecCchhHHHH
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARH-HHTL-LVHSRSDHSP-AVRQQLNAPFFADLNDLCE-LHPDVVLLSTSILSTQSV 104 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~-G~~V-~~~dr~~~~~-~~a~~~g~~~~~~~~~~~~-~~aDvVIlavp~~~~~~v 104 (335)
++.+||+|||+|.||..++..+.+. +++| .++|++++.. +.+.+.|+..+++.++++. .++|+|++|||.....++
T Consensus 3 ~~~~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~ 82 (354)
T 3db2_A 3 YNPVGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYNCAGDATMEALLAREDVEMVIITVPNDKHAEV 82 (354)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHTCCCCSSHHHHHHCSSCCEEEECSCTTSHHHH
T ss_pred CCcceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEEeCChHHHHHH
Confidence 3457999999999999999999886 6776 4789998765 3455668877888888762 359999999999887666
Q ss_pred Hhhc
Q 044593 105 LKSI 108 (335)
Q Consensus 105 l~~l 108 (335)
+...
T Consensus 83 ~~~a 86 (354)
T 3db2_A 83 IEQC 86 (354)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6544
No 184
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=98.35 E-value=1.6e-06 Score=80.58 Aligned_cols=112 Identities=17% Similarity=0.215 Sum_probs=69.5
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCC--eEEEEcCCCCcHHHHHh------CCCceecChhhHhhcCCCEEEEecCc---
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHHH--TLLVHSRSDHSPAVRQQ------LNAPFFADLNDLCELHPDVVLLSTSI--- 98 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G~--~V~~~dr~~~~~~~a~~------~g~~~~~~~~~~~~~~aDvVIlavp~--- 98 (335)
.++||+|||+|.||..+|..+...|+ +|+++|++++....+.+ ..+..+.+.++ + ++||+||++...
T Consensus 13 ~~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~~~~~~i~~t~d~~~-l-~~aD~Vi~aag~~~p 90 (303)
T 2i6t_A 13 TVNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEISKDLSA-S-AHSKVVIFTVNSLGS 90 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHHHTCTTEEEESCGGG-G-TTCSEEEECCCC---
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhhhcCCCeEEeCCHHH-H-CCCCEEEEcCCCCCC
Confidence 45899999999999999999999998 99999999752211211 12334567644 4 799999999721
Q ss_pred ----------h--hHHHHHhhccccccCCccEEEEcCCCCchHHHHHHhh--CCCCCceEec
Q 044593 99 ----------L--STQSVLKSIPFQRLKRSTLFVDVLSVKEFPRNLFLKY--LPQDFDILCT 146 (335)
Q Consensus 99 ----------~--~~~~vl~~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~--l~~~~~~v~~ 146 (335)
. ...++++++. .. .++++++.+++.-......+.+. +|. .+++|.
T Consensus 91 G~tR~dl~~~n~~i~~~i~~~i~-~~-~p~a~iiv~sNP~~~~t~~~~~~~~~p~-~rviG~ 149 (303)
T 2i6t_A 91 SQSYLDVVQSNVDMFRALVPALG-HY-SQHSVLLVASQPVEIMTYVTWKLSTFPA-NRVIGI 149 (303)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHH-HH-TTTCEEEECSSSHHHHHHHHHHHHCCCG-GGEEEC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHH-Hh-CCCeEEEEcCChHHHHHHHHHHhcCCCH-HHeeCC
Confidence 1 1456666664 33 47778776665333333444443 332 245554
No 185
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=98.34 E-value=5.2e-07 Score=85.85 Aligned_cols=90 Identities=16% Similarity=0.231 Sum_probs=64.4
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCc---eecC---hhhHhhcCCCEEEEecCchhHH
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAP---FFAD---LNDLCELHPDVVLLSTSILSTQ 102 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~---~~~~---~~~~~~~~aDvVIlavp~~~~~ 102 (335)
.+.|||+|+|+|.+|+.++..|.+ .++|.+.|++.+..+.+.+..-. ...+ +.+++ +++|+||.|+|+....
T Consensus 14 g~~mkilvlGaG~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~~~~~~~~d~~d~~~l~~~~-~~~DvVi~~~p~~~~~ 91 (365)
T 3abi_A 14 GRHMKVLILGAGNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVM-KEFELVIGALPGFLGF 91 (365)
T ss_dssp --CCEEEEECCSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHH-TTCSEEEECCCGGGHH
T ss_pred CCccEEEEECCCHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhccCCcEEEecCCHHHHHHHH-hCCCEEEEecCCcccc
Confidence 457899999999999999999976 48999999998776655443211 1222 34455 7899999999998766
Q ss_pred HHHhhccccccCCccEEEEcCC
Q 044593 103 SVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 103 ~vl~~l~~~~l~~~~iVvd~~S 124 (335)
.+++.. ++.|+-++|++-
T Consensus 92 ~v~~~~----~~~g~~yvD~s~ 109 (365)
T 3abi_A 92 KSIKAA----IKSKVDMVDVSF 109 (365)
T ss_dssp HHHHHH----HHHTCEEEECCC
T ss_pred hHHHHH----HhcCcceEeeec
Confidence 666543 345667777763
No 186
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=98.33 E-value=4.2e-06 Score=78.36 Aligned_cols=93 Identities=17% Similarity=0.213 Sum_probs=63.3
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCC-eEEEEcCCCCcHH-HHHh---------CCCce--ecChhhHhhcCCCEEEE
Q 044593 28 KSTSLKIAVIGFGNFGQFLAKAFARHHH-TLLVHSRSDHSPA-VRQQ---------LNAPF--FADLNDLCELHPDVVLL 94 (335)
Q Consensus 28 ~~~~~kI~IIG~G~mG~siA~~L~~~G~-~V~~~dr~~~~~~-~a~~---------~g~~~--~~~~~~~~~~~aDvVIl 94 (335)
.|+++||+|||+|.||.++|..|...|+ +|.++|++++..+ .+.+ ..... +++. +.+ ++||+||+
T Consensus 2 ~m~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~d~-~a~-~~aDvVIi 79 (321)
T 3p7m_A 2 AMARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTNDY-KDL-ENSDVVIV 79 (321)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGG-TTCSEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcCCH-HHH-CCCCEEEE
Confidence 3567899999999999999999999888 9999999987542 1111 12222 3454 445 79999999
Q ss_pred ecCch----------------hHHHHHhhccccccCCccEEEEcCC
Q 044593 95 STSIL----------------STQSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 95 avp~~----------------~~~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
+.+.. .+.++.+.+. . ..|+++++.+++
T Consensus 80 ~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~-~-~~p~a~vivvtN 123 (321)
T 3p7m_A 80 TAGVPRKPGMSRDDLLGINIKVMQTVGEGIK-H-NCPNAFVICITN 123 (321)
T ss_dssp CCSCCCCTTCCHHHHHHHHHHHHHHHHHHHH-H-HCTTCEEEECCS
T ss_pred cCCcCCCCCCCHHHHHHHhHHHHHHHHHHHH-H-HCCCcEEEEecC
Confidence 86432 1334444553 2 347777777754
No 187
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=98.33 E-value=8.7e-07 Score=83.25 Aligned_cols=80 Identities=14% Similarity=0.267 Sum_probs=62.0
Q ss_pred CCCCeEEEEcccHHHHHHHHHHH-H-cCCeE-EEEcCCCCcH-HHHHhCCC-ceecChhhHhh-cCCCEEEEecCchhHH
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFA-R-HHHTL-LVHSRSDHSP-AVRQQLNA-PFFADLNDLCE-LHPDVVLLSTSILSTQ 102 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~-~-~G~~V-~~~dr~~~~~-~~a~~~g~-~~~~~~~~~~~-~~aDvVIlavp~~~~~ 102 (335)
++++||+|||+|.||..++..+. + .++++ .++|++++.. +.+.+.|+ ..+++.++++. .++|+|++|+|.....
T Consensus 6 ~~~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~ 85 (346)
T 3cea_A 6 RKPLRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYTNYKDMIDTENIDAIFIVAPTPFHP 85 (346)
T ss_dssp CCCEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEESCHHHHHTTSCCSEEEECSCGGGHH
T ss_pred CCcceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeCChHhHH
Confidence 45689999999999999999998 5 36775 5789998765 34556687 46778888762 2699999999998876
Q ss_pred HHHhhc
Q 044593 103 SVLKSI 108 (335)
Q Consensus 103 ~vl~~l 108 (335)
+++...
T Consensus 86 ~~~~~a 91 (346)
T 3cea_A 86 EMTIYA 91 (346)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666544
No 188
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=98.33 E-value=9e-07 Score=83.32 Aligned_cols=78 Identities=22% Similarity=0.298 Sum_probs=61.3
Q ss_pred CCeEEEEcccHHHHHHHHHHH-H-cCCeEE-EEcCCCCcH-HHHHhCC--CceecChhhHhh-cCCCEEEEecCchhHHH
Q 044593 31 SLKIAVIGFGNFGQFLAKAFA-R-HHHTLL-VHSRSDHSP-AVRQQLN--APFFADLNDLCE-LHPDVVLLSTSILSTQS 103 (335)
Q Consensus 31 ~~kI~IIG~G~mG~siA~~L~-~-~G~~V~-~~dr~~~~~-~~a~~~g--~~~~~~~~~~~~-~~aDvVIlavp~~~~~~ 103 (335)
++||+|||+|.||..++..+. + .+++++ ++|++++.. +.+.+.| ...+++.++++. .++|+|++|+|.....+
T Consensus 2 ~~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~~~~~~~~~~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~ 81 (344)
T 3mz0_A 2 SLRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVEQYQLNATVYPNDDSLLADENVDAVLVTSWGPAHES 81 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSSHHHHHHHHHHTTCCCEEESSHHHHHHCTTCCEEEECSCGGGHHH
T ss_pred eEEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEECCCchhHHH
Confidence 469999999999999999998 4 366765 789998754 4556678 457788888872 24999999999998777
Q ss_pred HHhhc
Q 044593 104 VLKSI 108 (335)
Q Consensus 104 vl~~l 108 (335)
++...
T Consensus 82 ~~~~a 86 (344)
T 3mz0_A 82 SVLKA 86 (344)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66654
No 189
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=98.32 E-value=8.7e-07 Score=77.92 Aligned_cols=90 Identities=14% Similarity=0.184 Sum_probs=63.7
Q ss_pred CeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHH-HHhCCCce----ecCh---hhH-hhcCCCEEEEecCchhHH
Q 044593 32 LKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAV-RQQLNAPF----FADL---NDL-CELHPDVVLLSTSILSTQ 102 (335)
Q Consensus 32 ~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~-a~~~g~~~----~~~~---~~~-~~~~aDvVIlavp~~~~~ 102 (335)
|||.|+|+|.+|..+|..|.+.|++|+++|++++..+. +...|... .++. .++ + .++|+||++++.+...
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i-~~ad~vi~~~~~d~~n 79 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEV-SKNDVVVILTPRDEVN 79 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTC-CTTCEEEECCSCHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCc-ccCCEEEEecCCcHHH
Confidence 78999999999999999999999999999999887654 34456532 1222 222 2 6899999999998766
Q ss_pred HHHhhccccccCCccEEEEc
Q 044593 103 SVLKSIPFQRLKRSTLFVDV 122 (335)
Q Consensus 103 ~vl~~l~~~~l~~~~iVvd~ 122 (335)
..+..+.....+...+|+-+
T Consensus 80 ~~~~~~a~~~~~~~~iia~~ 99 (218)
T 3l4b_C 80 LFIAQLVMKDFGVKRVVSLV 99 (218)
T ss_dssp HHHHHHHHHTSCCCEEEECC
T ss_pred HHHHHHHHHHcCCCeEEEEE
Confidence 55554432223344455544
No 190
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=98.32 E-value=4.3e-07 Score=87.75 Aligned_cols=89 Identities=17% Similarity=0.195 Sum_probs=67.7
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceec---------------------------Chh
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFA---------------------------DLN 82 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~---------------------------~~~ 82 (335)
...+|+|||+|.+|...+..++..|.+|+++|+++...+.+.+.|..... ++.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~ 250 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELFA 250 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHHHH
Confidence 46899999999999999999999999999999999877767777765331 234
Q ss_pred hHhhcCCCEEEEe--cCchh-----HHHHHhhccccccCCccEEEEcCC
Q 044593 83 DLCELHPDVVLLS--TSILS-----TQSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 83 ~~~~~~aDvVIla--vp~~~-----~~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
+++ .++|+||.| +|... ..+.++ .++++.+|+|++.
T Consensus 251 e~~-~~aDvVI~~~~~pg~~ap~li~~~~l~-----~mk~g~vIVdva~ 293 (401)
T 1x13_A 251 AQA-KEVDIIVTTALIPGKPAPKLITREMVD-----SMKAGSVIVDLAA 293 (401)
T ss_dssp HHH-HHCSEEEECCCCTTSCCCCCBCHHHHH-----TSCTTCEEEETTG
T ss_pred HHh-CCCCEEEECCccCCCCCCeeeCHHHHh-----cCCCCcEEEEEcC
Confidence 555 679999999 44211 233333 3568999999974
No 191
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=98.32 E-value=1.3e-06 Score=81.51 Aligned_cols=77 Identities=14% Similarity=0.077 Sum_probs=60.2
Q ss_pred CeEEEEcccHHHHHH-HHHHHHcCCeEE-EEcCCCCcH-HHHHhCCCc-eecChhhHhh-cCCCEEEEecCchhHHHHHh
Q 044593 32 LKIAVIGFGNFGQFL-AKAFARHHHTLL-VHSRSDHSP-AVRQQLNAP-FFADLNDLCE-LHPDVVLLSTSILSTQSVLK 106 (335)
Q Consensus 32 ~kI~IIG~G~mG~si-A~~L~~~G~~V~-~~dr~~~~~-~~a~~~g~~-~~~~~~~~~~-~~aDvVIlavp~~~~~~vl~ 106 (335)
+||+|||+|.||..+ +..|.+.+++++ ++|++++.. +.+.+.|+. .+++.++++. .++|+|++|||+....+++.
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~ 80 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRATGGEVVSMMSTSAERGAAYATENGIGKSVTSVEELVGDPDVDAVYVSTTNELHREQTL 80 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHHTTCSCCBSCHHHHHTCTTCCEEEECSCGGGHHHHHH
T ss_pred CeEEEEcccHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChhHhHHHHH
Confidence 589999999999998 888877778764 789998655 446667874 6778888762 25999999999988766665
Q ss_pred hc
Q 044593 107 SI 108 (335)
Q Consensus 107 ~l 108 (335)
..
T Consensus 81 ~a 82 (332)
T 2glx_A 81 AA 82 (332)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 192
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=98.31 E-value=5.1e-06 Score=77.36 Aligned_cols=90 Identities=16% Similarity=0.196 Sum_probs=61.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHHcCC-eEEEEcCCCCcHHH-HHh--C-------C--CceecChhhHhhcCCCEEEEecC
Q 044593 31 SLKIAVIGFGNFGQFLAKAFARHHH-TLLVHSRSDHSPAV-RQQ--L-------N--APFFADLNDLCELHPDVVLLSTS 97 (335)
Q Consensus 31 ~~kI~IIG~G~mG~siA~~L~~~G~-~V~~~dr~~~~~~~-a~~--~-------g--~~~~~~~~~~~~~~aDvVIlavp 97 (335)
+|||+|||+|.||..++..|...|+ +|+++|++++..+. +.+ . . +..+++. +.+ ++||+||++++
T Consensus 2 ~~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~-~~aD~Vi~a~g 79 (309)
T 1ur5_A 2 RKKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-ADT-ANSDVIVVTSG 79 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGG-TTCSEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH-HHH-CCCCEEEEcCC
Confidence 3799999999999999999999997 99999999865431 111 1 1 1233566 445 79999999974
Q ss_pred chh----------------HHHHHhhccccccCCccEEEEcCC
Q 044593 98 ILS----------------TQSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 98 ~~~----------------~~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
... ..++.+.+. . ..++++|+.++.
T Consensus 80 ~p~~~g~~r~dl~~~n~~i~~~i~~~i~-~-~~p~a~vi~~tN 120 (309)
T 1ur5_A 80 APRKPGMSREDLIKVNADITRACISQAA-P-LSPNAVIIMVNN 120 (309)
T ss_dssp C--------CHHHHHHHHHHHHHHHHHG-G-GCTTCEEEECCS
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHH-h-hCCCeEEEEcCC
Confidence 321 234555553 2 347777766543
No 193
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=98.31 E-value=4.6e-06 Score=75.05 Aligned_cols=71 Identities=20% Similarity=0.274 Sum_probs=55.0
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCeEE-EEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCchhHHHHHh
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHHTLL-VHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILSTQSVLK 106 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~~V~-~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~~~~vl~ 106 (335)
|++|||+|+|+|.||..++..+.+.+.+++ ++|+++.. ..|+..+++++++. ++|+||-++.+..+.+.++
T Consensus 1 M~MmkI~ViGaGrMG~~i~~~l~~~~~eLva~~d~~~~~-----~~gv~v~~dl~~l~--~~DVvIDft~p~a~~~~~~ 72 (243)
T 3qy9_A 1 MASMKILLIGYGAMNQRVARLAEEKGHEIVGVIENTPKA-----TTPYQQYQHIADVK--GADVAIDFSNPNLLFPLLD 72 (243)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCC-------CCSCBCSCTTTCT--TCSEEEECSCHHHHHHHHT
T ss_pred CCceEEEEECcCHHHHHHHHHHHhCCCEEEEEEecCccc-----cCCCceeCCHHHHh--CCCEEEEeCChHHHHHHHH
Confidence 357899999999999999999998877765 47988752 46777778887764 7999997777777666665
No 194
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=98.31 E-value=1.3e-06 Score=81.48 Aligned_cols=78 Identities=21% Similarity=0.308 Sum_probs=57.8
Q ss_pred CCeEEEEcccHHHH-HHHHHHHHc-CCeEEEEcCCCCcH-HHHHhCCCce-ecChhhHhhcCCCEEEEecCchhHHHHHh
Q 044593 31 SLKIAVIGFGNFGQ-FLAKAFARH-HHTLLVHSRSDHSP-AVRQQLNAPF-FADLNDLCELHPDVVLLSTSILSTQSVLK 106 (335)
Q Consensus 31 ~~kI~IIG~G~mG~-siA~~L~~~-G~~V~~~dr~~~~~-~~a~~~g~~~-~~~~~~~~~~~aDvVIlavp~~~~~~vl~ 106 (335)
++||+|||+|.||. .++..|.+. +++|+++|++++.. +.+.+.|+.. ..+..+.+..++|+|++|||+....+++.
T Consensus 2 ~~~igiIG~G~ig~~~~~~~l~~~~~~~l~v~d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~D~V~i~tp~~~h~~~~~ 81 (323)
T 1xea_A 2 SLKIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCTDYRDVLQYGVDAVMIHAATDVHSTLAA 81 (323)
T ss_dssp CEEEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCSSTTGGGGGCCSEEEECSCGGGHHHHHH
T ss_pred CcEEEEECCCHHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHcCCCccccCHHHHhhcCCCEEEEECCchhHHHHHH
Confidence 46999999999998 599998775 67877999998765 4456677753 33333332258999999999998777665
Q ss_pred hc
Q 044593 107 SI 108 (335)
Q Consensus 107 ~l 108 (335)
..
T Consensus 82 ~a 83 (323)
T 1xea_A 82 FF 83 (323)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 195
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=98.30 E-value=1.2e-06 Score=86.16 Aligned_cols=71 Identities=17% Similarity=0.228 Sum_probs=50.1
Q ss_pred CCCCeEEEEcccHH--HHHHHHHHHHc----CCeEEEEcCCCCcHHHHH--------hCC----CceecChhhHhhcCCC
Q 044593 29 STSLKIAVIGFGNF--GQFLAKAFARH----HHTLLVHSRSDHSPAVRQ--------QLN----APFFADLNDLCELHPD 90 (335)
Q Consensus 29 ~~~~kI~IIG~G~m--G~siA~~L~~~----G~~V~~~dr~~~~~~~a~--------~~g----~~~~~~~~~~~~~~aD 90 (335)
|+.|||+|||+|.| |.+++..|... |++|++||++++..+.+. ..+ +..++|..+.+ ++||
T Consensus 1 m~~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~~~~~~~~~l~~~~~~~~I~~ttD~~eal-~dAD 79 (480)
T 1obb_A 1 MPSVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMNLDDVI-IDAD 79 (480)
T ss_dssp -CCCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHH-TTCS
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCcEEEEECCHHHHh-CCCC
Confidence 34689999999997 56667777643 789999999986543221 111 22356776666 8999
Q ss_pred EEEEecCchh
Q 044593 91 VVLLSTSILS 100 (335)
Q Consensus 91 vVIlavp~~~ 100 (335)
+||+++|...
T Consensus 80 ~VIiaagv~~ 89 (480)
T 1obb_A 80 FVINTAMVGG 89 (480)
T ss_dssp EEEECCCTTH
T ss_pred EEEECCCccc
Confidence 9999998644
No 196
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=98.30 E-value=3.4e-07 Score=85.15 Aligned_cols=88 Identities=15% Similarity=0.254 Sum_probs=63.3
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHc-CCeE-EEEcCCCCcHHHHHhCCCceecChhhHhh-cCCCEEEEecCchhHHHHH
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARH-HHTL-LVHSRSDHSPAVRQQLNAPFFADLNDLCE-LHPDVVLLSTSILSTQSVL 105 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~-G~~V-~~~dr~~~~~~~a~~~g~~~~~~~~~~~~-~~aDvVIlavp~~~~~~vl 105 (335)
++.+||+|||+|.||..++..|.+. ++++ .++|++++..+.+.+. +..+++.++++. .++|+|++|||+....+++
T Consensus 8 ~~~~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~~~~~~~~~~~~-~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~ 86 (315)
T 3c1a_A 8 NSPVRLALIGAGRWGKNYIRTIAGLPGAALVRLASSNPDNLALVPPG-CVIESDWRSVVSAPEVEAVIIATPPATHAEIT 86 (315)
T ss_dssp -CCEEEEEEECTTTTTTHHHHHHHCTTEEEEEEEESCHHHHTTCCTT-CEEESSTHHHHTCTTCCEEEEESCGGGHHHHH
T ss_pred CCcceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHhh-CcccCCHHHHhhCCCCCEEEEeCChHHHHHHH
Confidence 3457999999999999999999886 5665 5889987654322222 455677788762 2799999999999877776
Q ss_pred hhccccccCCcc-EEEE
Q 044593 106 KSIPFQRLKRST-LFVD 121 (335)
Q Consensus 106 ~~l~~~~l~~~~-iVvd 121 (335)
... ++.|. ++++
T Consensus 87 ~~a----l~~Gk~v~~e 99 (315)
T 3c1a_A 87 LAA----IASGKAVLVE 99 (315)
T ss_dssp HHH----HHTTCEEEEE
T ss_pred HHH----HHCCCcEEEc
Confidence 654 23443 5555
No 197
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=98.30 E-value=1e-06 Score=86.11 Aligned_cols=70 Identities=19% Similarity=0.142 Sum_probs=53.3
Q ss_pred CCCCeEEEEcccHH--HHHHHHHHHH----cCCeEEEEcCCCCcHHHHHhC---------CCceecChhhHhhcCCCEEE
Q 044593 29 STSLKIAVIGFGNF--GQFLAKAFAR----HHHTLLVHSRSDHSPAVRQQL---------NAPFFADLNDLCELHPDVVL 93 (335)
Q Consensus 29 ~~~~kI~IIG~G~m--G~siA~~L~~----~G~~V~~~dr~~~~~~~a~~~---------g~~~~~~~~~~~~~~aDvVI 93 (335)
|+.+||+|||+|.| |..++..|.. .| +|++||++++..+..... .+..++|..+++ ++||+||
T Consensus 3 m~~~KIaVIGaGs~g~g~~la~~l~~~~~~~g-eV~L~Di~~e~le~~~~~~~~l~~~~~~I~~TtD~~eAl-~dADfVI 80 (450)
T 3fef_A 3 LDQIKIAYIGGGSQGWARSLMSDLSIDERMSG-TVALYDLDFEAAQKNEVIGNHSGNGRWRYEAVSTLKKAL-SAADIVI 80 (450)
T ss_dssp CCCEEEEEETTTCSSHHHHHHHHHHHCSSCCE-EEEEECSSHHHHHHHHHHHTTSTTSCEEEEEESSHHHHH-TTCSEEE
T ss_pred CCCCEEEEECCChhHhHHHHHHHHHhccccCC-eEEEEeCCHHHHHHHHHHHHHHhccCCeEEEECCHHHHh-cCCCEEE
Confidence 56689999999996 6788888876 46 999999998654322211 234567888877 8999999
Q ss_pred EecCchh
Q 044593 94 LSTSILS 100 (335)
Q Consensus 94 lavp~~~ 100 (335)
+++++..
T Consensus 81 ~airvG~ 87 (450)
T 3fef_A 81 ISILPGS 87 (450)
T ss_dssp ECCCSSC
T ss_pred eccccCC
Confidence 9998653
No 198
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=98.29 E-value=2.6e-06 Score=79.80 Aligned_cols=91 Identities=15% Similarity=0.129 Sum_probs=66.5
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHc--CCeEEEEcCCCCcHH-HHHhC-----CCceecChhhHhhcCCCEEEEecCchh
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARH--HHTLLVHSRSDHSPA-VRQQL-----NAPFFADLNDLCELHPDVVLLSTSILS 100 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~--G~~V~~~dr~~~~~~-~a~~~-----g~~~~~~~~~~~~~~aDvVIlavp~~~ 100 (335)
...++|+|||+|.||.+++.+|.+. ..+|.+|||+++..+ .+.+. ++. ..+.++++ ++|+||.|||...
T Consensus 123 ~~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~~~~~~~-~~~~~e~v--~aDvVi~aTp~~~ 199 (322)
T 1omo_A 123 KNSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISAS-VQPAEEAS--RCDVLVTTTPSRK 199 (322)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEE-ECCHHHHT--SSSEEEECCCCSS
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhcCceEE-ECCHHHHh--CCCEEEEeeCCCC
Confidence 3567999999999999999999873 358999999987543 33322 233 56677765 7999999999753
Q ss_pred HHHHHhhccccccCCccEEEEcCCCCc
Q 044593 101 TQSVLKSIPFQRLKRSTLFVDVLSVKE 127 (335)
Q Consensus 101 ~~~vl~~l~~~~l~~~~iVvd~~SvK~ 127 (335)
.++. ...+++|+.|+++++.+.
T Consensus 200 --pv~~---~~~l~~G~~V~~ig~~~p 221 (322)
T 1omo_A 200 --PVVK---AEWVEEGTHINAIGADGP 221 (322)
T ss_dssp --CCBC---GGGCCTTCEEEECSCCST
T ss_pred --ceec---HHHcCCCeEEEECCCCCC
Confidence 2221 235789999999976643
No 199
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=98.29 E-value=5.9e-07 Score=83.28 Aligned_cols=96 Identities=16% Similarity=0.229 Sum_probs=68.1
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCC-eEEEEcCCCCcH-HHHHhCCC---cee--cChhhHhhcCCCEEEEecCchhH
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHH-TLLVHSRSDHSP-AVRQQLNA---PFF--ADLNDLCELHPDVVLLSTSILST 101 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~-~V~~~dr~~~~~-~~a~~~g~---~~~--~~~~~~~~~~aDvVIlavp~~~~ 101 (335)
...++|+|||+|.||..++..|.+.|+ +|++++|+++.. +.+.+.+. ... .++.+.+ .++|+||.|||....
T Consensus 139 l~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~~~~-~~aDivIn~t~~~~~ 217 (297)
T 2egg_A 139 LDGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFSLAEAETRL-AEYDIIINTTSVGMH 217 (297)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEECHHHHHHTG-GGCSEEEECSCTTCS
T ss_pred CCCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceeeHHHHHhhh-ccCCEEEECCCCCCC
Confidence 357899999999999999999999998 999999997654 44555443 221 2334445 689999999997753
Q ss_pred HHHH-hhccccccCCccEEEEcCCC
Q 044593 102 QSVL-KSIPFQRLKRSTLFVDVLSV 125 (335)
Q Consensus 102 ~~vl-~~l~~~~l~~~~iVvd~~Sv 125 (335)
...- ..+....++++.+|+|+...
T Consensus 218 ~~~~~~~i~~~~l~~~~~v~D~~y~ 242 (297)
T 2egg_A 218 PRVEVQPLSLERLRPGVIVSDIIYN 242 (297)
T ss_dssp SCCSCCSSCCTTCCTTCEEEECCCS
T ss_pred CCCCCCCCCHHHcCCCCEEEEcCCC
Confidence 1100 01212347789999999764
No 200
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=98.29 E-value=1.2e-06 Score=84.14 Aligned_cols=89 Identities=12% Similarity=0.224 Sum_probs=67.8
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCcee---c-C-------------------------
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFF---A-D------------------------- 80 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~---~-~------------------------- 80 (335)
...+|+|+|+|.+|...+..++..|.+|+++|+++...+.+.++|.... . +
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~~ 250 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEA 250 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHHH
Confidence 5789999999999999999999999999999999987776777876432 1 0
Q ss_pred hhhHhhcCCCEEEEec--Cchh-----HHHHHhhccccccCCccEEEEcCC
Q 044593 81 LNDLCELHPDVVLLST--SILS-----TQSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 81 ~~~~~~~~aDvVIlav--p~~~-----~~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
+.+.+ .++|+||.|+ |... ..+.++ .++++.+|+|++.
T Consensus 251 l~~~~-~~aDvVi~~~~~pg~~~~~li~~~~l~-----~mk~g~vivdva~ 295 (384)
T 1l7d_A 251 VLKEL-VKTDIAITTALIPGKPAPVLITEEMVT-----KMKPGSVIIDLAV 295 (384)
T ss_dssp HHHHH-TTCSEEEECCCCTTSCCCCCSCHHHHT-----TSCTTCEEEETTG
T ss_pred HHHHh-CCCCEEEECCccCCCCCCeeeCHHHHh-----cCCCCCEEEEEec
Confidence 44555 6899999998 4211 133332 3678999999973
No 201
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=98.28 E-value=3e-06 Score=70.21 Aligned_cols=95 Identities=9% Similarity=-0.023 Sum_probs=63.8
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCC-CcHHHH---HhCCCcee----cCh---hhH-hhcCCCEEEEec
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSD-HSPAVR---QQLNAPFF----ADL---NDL-CELHPDVVLLST 96 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~-~~~~~a---~~~g~~~~----~~~---~~~-~~~~aDvVIlav 96 (335)
|..++|.|+|+|.+|..++..|.+.|++|+++|+++ +..+.. ...|+... ++. .++ + .++|+||+++
T Consensus 1 ~~~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i-~~ad~vi~~~ 79 (153)
T 1id1_A 1 HRKDHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGI-DRCRAILALS 79 (153)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTT-TTCSEEEECS
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcCh-hhCCEEEEec
Confidence 346789999999999999999999999999999985 333222 23354321 222 222 3 6899999999
Q ss_pred CchhHHHHHhhcccccc-CCccEEEEcCCC
Q 044593 97 SILSTQSVLKSIPFQRL-KRSTLFVDVLSV 125 (335)
Q Consensus 97 p~~~~~~vl~~l~~~~l-~~~~iVvd~~Sv 125 (335)
+.+.....+.... ..+ +...+|+.+.+.
T Consensus 80 ~~d~~n~~~~~~a-~~~~~~~~ii~~~~~~ 108 (153)
T 1id1_A 80 DNDADNAFVVLSA-KDMSSDVKTVLAVSDS 108 (153)
T ss_dssp SCHHHHHHHHHHH-HHHTSSSCEEEECSSG
T ss_pred CChHHHHHHHHHH-HHHCCCCEEEEEECCH
Confidence 9887555444442 223 344566666543
No 202
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=98.27 E-value=3.9e-06 Score=78.47 Aligned_cols=91 Identities=16% Similarity=0.163 Sum_probs=58.8
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCC--eEEEEcCCCCcHH-HHHh--CCC------ceecChhhHhhcCCCEEEEecCc
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHHH--TLLVHSRSDHSPA-VRQQ--LNA------PFFADLNDLCELHPDVVLLSTSI 98 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G~--~V~~~dr~~~~~~-~a~~--~g~------~~~~~~~~~~~~~aDvVIlavp~ 98 (335)
+.+||+|||+|.+|.+++..|...|+ +|+++|++++..+ .+.+ .+. ....+..+.+ ++||+||++++.
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~-~~aDvVii~~g~ 84 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYSDV-KDCDVIVVTAGA 84 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CGGGG-TTCSEEEECCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEECCHHHh-CCCCEEEEcCCC
Confidence 45899999999999999999999987 8999999975432 1222 111 1111223345 799999999875
Q ss_pred hh----------------HHHHHhhccccccCCccEEEEcC
Q 044593 99 LS----------------TQSVLKSIPFQRLKRSTLFVDVL 123 (335)
Q Consensus 99 ~~----------------~~~vl~~l~~~~l~~~~iVvd~~ 123 (335)
.. +.++.+.+. + ..++++|+.++
T Consensus 85 p~k~g~~r~dl~~~n~~i~~~i~~~i~-~-~~p~a~viv~t 123 (318)
T 1y6j_A 85 NRKPGETRLDLAKKNVMIAKEVTQNIM-K-YYNHGVILVVS 123 (318)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHH-H-HCCSCEEEECS
T ss_pred CCCCCcCHHHHHHhhHHHHHHHHHHHH-H-hCCCcEEEEec
Confidence 43 345555553 2 35777777764
No 203
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=98.26 E-value=1.5e-06 Score=85.49 Aligned_cols=112 Identities=12% Similarity=0.099 Sum_probs=73.2
Q ss_pred CCeEEEEcccHH-HHHHHHHHHHc-----CCeEEEEcCCCCcHHHHH--------hCC----CceecChhhHhhcCCCEE
Q 044593 31 SLKIAVIGFGNF-GQFLAKAFARH-----HHTLLVHSRSDHSPAVRQ--------QLN----APFFADLNDLCELHPDVV 92 (335)
Q Consensus 31 ~~kI~IIG~G~m-G~siA~~L~~~-----G~~V~~~dr~~~~~~~a~--------~~g----~~~~~~~~~~~~~~aDvV 92 (335)
.+||+|||+|.+ |..++..|... +.+|++||++++..+... ..+ +..++|..+.+ ++||+|
T Consensus 28 ~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~~~~~~~l~~~~~~~~I~~t~D~~eal-~~AD~V 106 (472)
T 1u8x_X 28 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAF-TDVDFV 106 (472)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCHHHHH-SSCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCCEEEEECCHHHHH-cCCCEE
Confidence 469999999998 66677778776 568999999986543211 111 22356776666 899999
Q ss_pred EEecCchh------------------------------------HHHHHhhccccccCCccEEEEcCCCCchHHHHHHhh
Q 044593 93 LLSTSILS------------------------------------TQSVLKSIPFQRLKRSTLFVDVLSVKEFPRNLFLKY 136 (335)
Q Consensus 93 Ilavp~~~------------------------------------~~~vl~~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~ 136 (335)
|+++|... +.++++.+. ...|+++++.+++--..+...+.+.
T Consensus 107 Viaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~--~~~P~A~ii~~TNPvdi~T~~~~k~ 184 (472)
T 1u8x_X 107 MAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYME--KYSPDAWMLNYSNPAAIVAEATRRL 184 (472)
T ss_dssp EECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHH--HHCTTCEEEECCSCHHHHHHHHHHH
T ss_pred EEcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHH--HHCCCeEEEEeCCcHHHHHHHHHHh
Confidence 99998743 334445553 2568888887765433344566665
Q ss_pred CCCCCceEec
Q 044593 137 LPQDFDILCT 146 (335)
Q Consensus 137 l~~~~~~v~~ 146 (335)
.|. .+++|.
T Consensus 185 ~p~-~rViG~ 193 (472)
T 1u8x_X 185 RPN-SKILNI 193 (472)
T ss_dssp STT-CCEEEC
T ss_pred CCC-CCEEEe
Confidence 543 355554
No 204
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=98.26 E-value=4e-06 Score=78.67 Aligned_cols=93 Identities=15% Similarity=0.142 Sum_probs=61.9
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCC--eEEEEcCCCCcHHH-H---Hh------CCCceecChhhHhhcCCCEEEEec
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHH--TLLVHSRSDHSPAV-R---QQ------LNAPFFADLNDLCELHPDVVLLST 96 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~--~V~~~dr~~~~~~~-a---~~------~g~~~~~~~~~~~~~~aDvVIlav 96 (335)
...+||+|||+|.||+++|..|...|+ +|+++|++++..+. + .. .++..+++..+.+ ++||+||++.
T Consensus 3 ~~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~~a~-~~aDvVvi~a 81 (326)
T 3pqe_A 3 KHVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTYEDC-KDADIVCICA 81 (326)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECGGGG-TTCSEEEECC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcHHHh-CCCCEEEEec
Confidence 346899999999999999999999987 89999998764331 1 11 1222233223445 7999999987
Q ss_pred Cchh----------------HHHHHhhccccccCCccEEEEcCC
Q 044593 97 SILS----------------TQSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 97 p~~~----------------~~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
.... +.++.+.+. . ..++++|+.+++
T Consensus 82 g~p~kpG~~R~dL~~~N~~Iv~~i~~~I~-~-~~p~a~vlvvtN 123 (326)
T 3pqe_A 82 GANQKPGETRLELVEKNLKIFKGIVSEVM-A-SGFDGIFLVATN 123 (326)
T ss_dssp SCCCCTTCCHHHHHHHHHHHHHHHHHHHH-H-TTCCSEEEECSS
T ss_pred ccCCCCCccHHHHHHHHHHHHHHHHHHHH-H-hcCCeEEEEcCC
Confidence 4321 233444442 2 356777777764
No 205
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=98.25 E-value=1.6e-06 Score=80.82 Aligned_cols=78 Identities=21% Similarity=0.247 Sum_probs=60.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHHc-CCeE-EEEcCCCCcHH-HHHhCCC-ceecChhhHhhcCCCEEEEecCchhHHHHHh
Q 044593 31 SLKIAVIGFGNFGQFLAKAFARH-HHTL-LVHSRSDHSPA-VRQQLNA-PFFADLNDLCELHPDVVLLSTSILSTQSVLK 106 (335)
Q Consensus 31 ~~kI~IIG~G~mG~siA~~L~~~-G~~V-~~~dr~~~~~~-~a~~~g~-~~~~~~~~~~~~~aDvVIlavp~~~~~~vl~ 106 (335)
++||+|||+|.||..++..|.+. ++++ .++|++++..+ .+.+.|+ ..+++.++++..++|+|++|||+....+++.
T Consensus 1 ~~~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~D~V~i~tp~~~h~~~~~ 80 (325)
T 2ho3_A 1 MLKLGVIGTGAISHHFIEAAHTSGEYQLVAIYSRKLETAATFASRYQNIQLFDQLEVFFKSSFDLVYIASPNSLHFAQAK 80 (325)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTSEEEEEEECSSHHHHHHHGGGSSSCEEESCHHHHHTSSCSEEEECSCGGGHHHHHH
T ss_pred CeEEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcCCCeEeCCHHHHhCCCCCEEEEeCChHHHHHHHH
Confidence 36899999999999999999886 4666 57899986543 4455675 4567888775247999999999988776666
Q ss_pred hc
Q 044593 107 SI 108 (335)
Q Consensus 107 ~l 108 (335)
..
T Consensus 81 ~a 82 (325)
T 2ho3_A 81 AA 82 (325)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 206
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=98.25 E-value=5.5e-06 Score=77.67 Aligned_cols=92 Identities=18% Similarity=0.223 Sum_probs=63.4
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCC-eEEEEcCCCCcHH-HHHh---------CCCc--eecChhhHhhcCCCEEEEe
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHH-TLLVHSRSDHSPA-VRQQ---------LNAP--FFADLNDLCELHPDVVLLS 95 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~-~V~~~dr~~~~~~-~a~~---------~g~~--~~~~~~~~~~~~aDvVIla 95 (335)
|+++||+|||+|.||.++|..|...|+ +|+++|++++..+ .+.+ .... .+++. +.+ ++||+||++
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d~-~a~-~~aDiVIia 82 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDY-AAI-EGADVVIVT 82 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESSG-GGG-TTCSEEEEC
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCCH-HHH-CCCCEEEEc
Confidence 567899999999999999999999998 9999999987542 1111 1222 24555 455 899999999
Q ss_pred cCchh----------------HHHHHhhccccccCCccEEEEcCC
Q 044593 96 TSILS----------------TQSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 96 vp~~~----------------~~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
.+... +.++.+.+. . ..++++++.+++
T Consensus 83 ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~-~-~~p~a~iivvtN 125 (324)
T 3gvi_A 83 AGVPRKPGMSRDDLLGINLKVMEQVGAGIK-K-YAPEAFVICITN 125 (324)
T ss_dssp CSCCCC-----CHHHHHHHHHHHHHHHHHH-H-HCTTCEEEECCS
T ss_pred cCcCCCCCCCHHHHHHhhHHHHHHHHHHHH-H-HCCCeEEEecCC
Confidence 74221 234444443 2 347778877764
No 207
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=98.24 E-value=5.4e-06 Score=77.45 Aligned_cols=94 Identities=16% Similarity=0.178 Sum_probs=62.1
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCC--eEEEEcCCCCcHH-HHHh---------CCCceecChhhHhhcCCCEEEEe
Q 044593 28 KSTSLKIAVIGFGNFGQFLAKAFARHHH--TLLVHSRSDHSPA-VRQQ---------LNAPFFADLNDLCELHPDVVLLS 95 (335)
Q Consensus 28 ~~~~~kI~IIG~G~mG~siA~~L~~~G~--~V~~~dr~~~~~~-~a~~---------~g~~~~~~~~~~~~~~aDvVIla 95 (335)
.|+.+||+|||+|.+|.+++..|...|. +|.++|++++..+ .+.+ ..+....+..+.+ ++||+||++
T Consensus 3 ~m~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~~~~~a~-~~aDvVvi~ 81 (317)
T 3d0o_A 3 KFKGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKAGEYSDC-HDADLVVIC 81 (317)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEECCGGGG-TTCSEEEEC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEeCCHHHh-CCCCEEEEC
Confidence 3567899999999999999999998885 8999999875332 1111 1222222334455 899999999
Q ss_pred cCchh----------------HHHHHhhccccccCCccEEEEcCC
Q 044593 96 TSILS----------------TQSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 96 vp~~~----------------~~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
++... +.++.+.+. + ..++++|+.++.
T Consensus 82 ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~-~-~~p~a~viv~tN 124 (317)
T 3d0o_A 82 AGAAQKPGETRLDLVSKNLKIFKSIVGEVM-A-SKFDGIFLVATN 124 (317)
T ss_dssp CCCCCCTTCCHHHHHHHHHHHHHHHHHHHH-H-TTCCSEEEECSS
T ss_pred CCCCCCCCCcHHHHHHHHHHHHHHHHHHHH-H-hCCCcEEEEecC
Confidence 86432 233444443 2 357777777653
No 208
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=98.24 E-value=2e-06 Score=82.00 Aligned_cols=95 Identities=13% Similarity=0.189 Sum_probs=65.4
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHh-CCCce------ecChhhHhhcCCCEEEEecCchh-
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQ-LNAPF------FADLNDLCELHPDVVLLSTSILS- 100 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~-~g~~~------~~~~~~~~~~~aDvVIlavp~~~- 100 (335)
...++|+|+|+|.||..+++.++..|++|+++|++++..+.+.+ .|... ..+..+++ .++|+||.|++...
T Consensus 164 l~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~-~~~DvVi~~~g~~~~ 242 (369)
T 2eez_A 164 VAPASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSV-QHADLLIGAVLVPGA 242 (369)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHH-HHCSEEEECCC----
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHH-hCCCEEEECCCCCcc
Confidence 45689999999999999999999999999999999876655544 55432 12334555 68999999998653
Q ss_pred -HHHH-HhhccccccCCccEEEEcCCC
Q 044593 101 -TQSV-LKSIPFQRLKRSTLFVDVLSV 125 (335)
Q Consensus 101 -~~~v-l~~l~~~~l~~~~iVvd~~Sv 125 (335)
...+ .++. .+.++++.+|+|+++.
T Consensus 243 ~~~~li~~~~-l~~mk~gg~iV~v~~~ 268 (369)
T 2eez_A 243 KAPKLVTRDM-LSLMKEGAVIVDVAVD 268 (369)
T ss_dssp ---CCSCHHH-HTTSCTTCEEEECC--
T ss_pred ccchhHHHHH-HHhhcCCCEEEEEecC
Confidence 1111 1111 1346688999999865
No 209
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=98.24 E-value=2.8e-06 Score=79.61 Aligned_cols=80 Identities=13% Similarity=0.142 Sum_probs=60.6
Q ss_pred CCCCeEEEEcccHHHH-HHHHHHHHcCCeE-EEEcCCCCcH-HHHHhC-CCceecChhhHhh-cCCCEEEEecCchhHHH
Q 044593 29 STSLKIAVIGFGNFGQ-FLAKAFARHHHTL-LVHSRSDHSP-AVRQQL-NAPFFADLNDLCE-LHPDVVLLSTSILSTQS 103 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~-siA~~L~~~G~~V-~~~dr~~~~~-~~a~~~-g~~~~~~~~~~~~-~~aDvVIlavp~~~~~~ 103 (335)
|+++||+|||+|.+|. .++..|...+++| .++|++++.. +.+.+. +...+++.++++. .+.|+|++|||.....+
T Consensus 2 M~~~rvgiiG~G~~~~~~~~~~l~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~ 81 (336)
T 2p2s_A 2 MKKIRFAAIGLAHNHIYDMCQQLIDAGAELAGVFESDSDNRAKFTSLFPSVPFAASAEQLITDASIDLIACAVIPCDRAE 81 (336)
T ss_dssp --CCEEEEECCSSTHHHHHHHHHHHTTCEEEEEECSCTTSCHHHHHHSTTCCBCSCHHHHHTCTTCCEEEECSCGGGHHH
T ss_pred CCccEEEEECCChHHHHHhhhhhcCCCcEEEEEeCCCHHHHHHHHHhcCCCcccCCHHHHhhCCCCCEEEEeCChhhHHH
Confidence 4578999999999996 6778887778886 6889998754 445566 5567788888872 26999999999987666
Q ss_pred HHhhc
Q 044593 104 VLKSI 108 (335)
Q Consensus 104 vl~~l 108 (335)
+....
T Consensus 82 ~~~~a 86 (336)
T 2p2s_A 82 LALRT 86 (336)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65543
No 210
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=98.22 E-value=1.3e-06 Score=82.95 Aligned_cols=80 Identities=10% Similarity=0.134 Sum_probs=60.6
Q ss_pred CCCCeEEEEcccHHHHH-HHHHHHHc-CCeEE-EEcCCCCcHHH-HHhC-CCceecChhhHhh-cCCCEEEEecCchhHH
Q 044593 29 STSLKIAVIGFGNFGQF-LAKAFARH-HHTLL-VHSRSDHSPAV-RQQL-NAPFFADLNDLCE-LHPDVVLLSTSILSTQ 102 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~s-iA~~L~~~-G~~V~-~~dr~~~~~~~-a~~~-g~~~~~~~~~~~~-~~aDvVIlavp~~~~~ 102 (335)
|+.+||+|||+|.||.. ++..|.+. +.+|+ ++|++++..+. +.+. +...+++.++++. .+.|+|++|+|.....
T Consensus 3 M~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~ 82 (359)
T 3m2t_A 3 LSLIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSDLERARRVHRFISDIPVLDNVPAMLNQVPLDAVVMAGPPQLHF 82 (359)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECSSHHHHGGGGGTSCSCCEESSHHHHHHHSCCSEEEECSCHHHHH
T ss_pred CCcceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHhcCCCcccCCHHHHhcCCCCCEEEEcCCcHHHH
Confidence 45689999999999995 88998876 56765 78999876543 3344 4556788888872 2579999999998876
Q ss_pred HHHhhc
Q 044593 103 SVLKSI 108 (335)
Q Consensus 103 ~vl~~l 108 (335)
+++...
T Consensus 83 ~~~~~a 88 (359)
T 3m2t_A 83 EMGLLA 88 (359)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666554
No 211
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=98.21 E-value=2.9e-06 Score=79.31 Aligned_cols=86 Identities=21% Similarity=0.291 Sum_probs=61.4
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHc-CCeE-EEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCchhHHHHHh
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARH-HHTL-LVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILSTQSVLK 106 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~-G~~V-~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~~~~vl~ 106 (335)
|+++||+|||+|.||..++..+.+. ++++ .++|+++.. +.+ .|+..+++.++++ .++|+||+|+|+....+.+.
T Consensus 1 M~~irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~~~~-~~~--~gv~~~~d~~~ll-~~~DvViiatp~~~h~~~~~ 76 (320)
T 1f06_A 1 MTNIRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATL-DTK--TPVFDVADVDKHA-DDVDVLFLCMGSATDIPEQA 76 (320)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCC-SSS--SCEEEGGGGGGTT-TTCSEEEECSCTTTHHHHHH
T ss_pred CCCCEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCCHHH-hhc--CCCceeCCHHHHh-cCCCEEEEcCCcHHHHHHHH
Confidence 4567999999999999999999876 4665 578998654 222 4655566777776 78999999999886544433
Q ss_pred hccccccCCccEEEEc
Q 044593 107 SIPFQRLKRSTLFVDV 122 (335)
Q Consensus 107 ~l~~~~l~~~~iVvd~ 122 (335)
.. ++.|..|++.
T Consensus 77 ~a----l~aG~~Vv~e 88 (320)
T 1f06_A 77 PK----FAQFACTVDT 88 (320)
T ss_dssp HH----HTTTSEEECC
T ss_pred HH----HHCCCEEEEC
Confidence 22 3345555553
No 212
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=98.21 E-value=5.9e-06 Score=76.41 Aligned_cols=89 Identities=12% Similarity=0.151 Sum_probs=61.8
Q ss_pred CeEEEEcccHHHHHHHHHHHHcCC--eEEEEcCCCCcHH-HHHh-------C--C--CceecChhhHhhcCCCEEEEecC
Q 044593 32 LKIAVIGFGNFGQFLAKAFARHHH--TLLVHSRSDHSPA-VRQQ-------L--N--APFFADLNDLCELHPDVVLLSTS 97 (335)
Q Consensus 32 ~kI~IIG~G~mG~siA~~L~~~G~--~V~~~dr~~~~~~-~a~~-------~--g--~~~~~~~~~~~~~~aDvVIlavp 97 (335)
|||+|||+|.||.++|..|...|+ +|.+||++++..+ .+.+ . . +..+++ .+.+ ++||+||++.+
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~-~~aDiVViaag 78 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLL-KGSEIIVVTAG 78 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGG-TTCSEEEECCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC-HHHh-CCCCEEEECCC
Confidence 799999999999999999999998 9999999986542 1111 1 1 122345 5555 89999999875
Q ss_pred chh----------------HHHHHhhccccccCCccEEEEcCC
Q 044593 98 ILS----------------TQSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 98 ~~~----------------~~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
... +.++.+.+. . ..|+++|+.+++
T Consensus 79 ~~~kpG~~R~dl~~~N~~i~~~i~~~i~-~-~~p~a~iivvsN 119 (294)
T 1oju_A 79 LARKPGMTRLDLAHKNAGIIKDIAKKIV-E-NAPESKILVVTN 119 (294)
T ss_dssp CCCCSSCCHHHHHHHHHHHHHHHHHHHH-T-TSTTCEEEECSS
T ss_pred CCCCCCCcHHHHHHHHHHHHHHHHHHHH-h-hCCCeEEEEeCC
Confidence 321 234444453 2 467788887764
No 213
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=98.17 E-value=1.5e-06 Score=79.92 Aligned_cols=95 Identities=17% Similarity=0.143 Sum_probs=66.4
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCC-eEEEEcCCCCcH-HHHHhCCC---ceecChhhHhhcCCCEEEEecCchhHHH
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHH-TLLVHSRSDHSP-AVRQQLNA---PFFADLNDLCELHPDVVLLSTSILSTQS 103 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~-~V~~~dr~~~~~-~~a~~~g~---~~~~~~~~~~~~~aDvVIlavp~~~~~~ 103 (335)
...+++.|+|+|.+|.+++..|.+.|. +|++++|+++.. +.+.+.+. ....+.+++. .++|+||.|||.....+
T Consensus 124 l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~l~-~~aDiIInaTp~gm~~~ 202 (281)
T 3o8q_A 124 LKGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQLK-QSYDVIINSTSASLDGE 202 (281)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCC-SCEEEEEECSCCCC---
T ss_pred ccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHHHhc-CCCCEEEEcCcCCCCCC
Confidence 357899999999999999999999996 999999998654 33333221 1122345554 68999999999875432
Q ss_pred HHhhccccccCCccEEEEcCCC
Q 044593 104 VLKSIPFQRLKRSTLFVDVLSV 125 (335)
Q Consensus 104 vl~~l~~~~l~~~~iVvd~~Sv 125 (335)
. ..+....++++.+|+|+...
T Consensus 203 ~-~~l~~~~l~~~~~V~DlvY~ 223 (281)
T 3o8q_A 203 L-PAIDPVIFSSRSVCYDMMYG 223 (281)
T ss_dssp --CSCCGGGEEEEEEEEESCCC
T ss_pred C-CCCCHHHhCcCCEEEEecCC
Confidence 2 12222457789999999755
No 214
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=98.17 E-value=2.4e-06 Score=83.26 Aligned_cols=84 Identities=12% Similarity=0.210 Sum_probs=63.5
Q ss_pred cccCCCCCeEEEEcccHHHH-HHHHHHHHc-CCeE-EEEcCCCCcH-HHHHhCCCc-----eecChhhHhh-cCCCEEEE
Q 044593 25 QYVKSTSLKIAVIGFGNFGQ-FLAKAFARH-HHTL-LVHSRSDHSP-AVRQQLNAP-----FFADLNDLCE-LHPDVVLL 94 (335)
Q Consensus 25 ~~~~~~~~kI~IIG~G~mG~-siA~~L~~~-G~~V-~~~dr~~~~~-~~a~~~g~~-----~~~~~~~~~~-~~aDvVIl 94 (335)
..+.++.+||+|||+|.||. .++..|.+. ++++ .++|++++.. +.+.+.|+. .+.+.++++. .++|+|++
T Consensus 77 ~~~~~~~irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~ll~~~~vD~V~i 156 (433)
T 1h6d_A 77 PMPEDRRFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYI 156 (433)
T ss_dssp CCCCCCCEEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSSGGGGGGCTTCCEEEE
T ss_pred CCCCCCceEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCcccccccCCHHHHhcCCCCCEEEE
Confidence 34456778999999999997 899998875 4665 5789998654 445666764 4677888762 27999999
Q ss_pred ecCchhHHHHHhhc
Q 044593 95 STSILSTQSVLKSI 108 (335)
Q Consensus 95 avp~~~~~~vl~~l 108 (335)
|||.....+++...
T Consensus 157 atp~~~h~~~~~~a 170 (433)
T 1h6d_A 157 ILPNSLHAEFAIRA 170 (433)
T ss_dssp CSCGGGHHHHHHHH
T ss_pred cCCchhHHHHHHHH
Confidence 99999877666654
No 215
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=98.16 E-value=3.4e-06 Score=79.40 Aligned_cols=80 Identities=13% Similarity=0.183 Sum_probs=60.8
Q ss_pred CCCCeEEEEcccHHHHH-HHHHHHHc-CCeEE-EEcCCCCcH-HHHHhCCCc-eecChhhHhh-cCCCEEEEecCchhHH
Q 044593 29 STSLKIAVIGFGNFGQF-LAKAFARH-HHTLL-VHSRSDHSP-AVRQQLNAP-FFADLNDLCE-LHPDVVLLSTSILSTQ 102 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~s-iA~~L~~~-G~~V~-~~dr~~~~~-~~a~~~g~~-~~~~~~~~~~-~~aDvVIlavp~~~~~ 102 (335)
.+++||||||+|.||.. ++.++.+. +.+|+ ++|++++.. +.+.+.|+. .++|.++++. .+.|+|++|||+..-.
T Consensus 21 ~~mirigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~I~tP~~~H~ 100 (350)
T 4had_A 21 QSMLRFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADRFSVPHAFGSYEEMLASDVIDAVYIPLPTSQHI 100 (350)
T ss_dssp -CCEEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCSSCSEEEECSCGGGHH
T ss_pred cCccEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCeeeCCHHHHhcCCCCCEEEEeCCCchhH
Confidence 36789999999999975 56777775 56765 679998754 556777875 6788998862 3589999999999866
Q ss_pred HHHhhc
Q 044593 103 SVLKSI 108 (335)
Q Consensus 103 ~vl~~l 108 (335)
++....
T Consensus 101 ~~~~~a 106 (350)
T 4had_A 101 EWSIKA 106 (350)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 655543
No 216
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=98.16 E-value=2.7e-06 Score=79.76 Aligned_cols=78 Identities=12% Similarity=0.196 Sum_probs=60.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHHcC---CeE-EEEcCCCCcH-HHHHhCCC-ceecChhhHhh-cCCCEEEEecCchhHHH
Q 044593 31 SLKIAVIGFGNFGQFLAKAFARHH---HTL-LVHSRSDHSP-AVRQQLNA-PFFADLNDLCE-LHPDVVLLSTSILSTQS 103 (335)
Q Consensus 31 ~~kI~IIG~G~mG~siA~~L~~~G---~~V-~~~dr~~~~~-~~a~~~g~-~~~~~~~~~~~-~~aDvVIlavp~~~~~~ 103 (335)
++||||||+|.||..++..+.+.+ ++| .++|++++.. +.+.+.|+ ..+++.++++. .+.|+|++|||.....+
T Consensus 2 ~~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~ 81 (334)
T 3ohs_X 2 ALRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHDIPKAYGSYEELAKDPNVEVAYVGTQHPQHKA 81 (334)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHHHHHTCSCEESSHHHHHHCTTCCEEEECCCGGGHHH
T ss_pred ccEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCcHHHHH
Confidence 469999999999999999998754 354 5679997654 45666787 46788888872 26999999999998766
Q ss_pred HHhhc
Q 044593 104 VLKSI 108 (335)
Q Consensus 104 vl~~l 108 (335)
+....
T Consensus 82 ~~~~a 86 (334)
T 3ohs_X 82 AVMLC 86 (334)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66554
No 217
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=98.14 E-value=6.9e-06 Score=76.70 Aligned_cols=92 Identities=18% Similarity=0.239 Sum_probs=61.1
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCC-eEEEEcCCC--CcHH-HHHh---------CC--CceecChhhHhhcCCCEEE
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHH-TLLVHSRSD--HSPA-VRQQ---------LN--APFFADLNDLCELHPDVVL 93 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~-~V~~~dr~~--~~~~-~a~~---------~g--~~~~~~~~~~~~~~aDvVI 93 (335)
|+.+||+|||+|.||.++|..+...|+ +|+++|+++ +..+ .+.+ .. +..+++.++ + ++||+||
T Consensus 6 ~~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~d~~a-~-~~aDvVI 83 (315)
T 3tl2_A 6 IKRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTSDYAD-T-ADSDVVV 83 (315)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEESCGGG-G-TTCSEEE
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcCCHHH-h-CCCCEEE
Confidence 456799999999999999999999999 999999994 2221 1111 11 122345444 4 7999999
Q ss_pred EecCchh----------------HHHHHhhccccccCCccEEEEcCC
Q 044593 94 LSTSILS----------------TQSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 94 lavp~~~----------------~~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
++..... +.++.+.+. . ..++++|+.+++
T Consensus 84 iaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~-~-~~p~a~vlvvsN 128 (315)
T 3tl2_A 84 ITAGIARKPGMSRDDLVATNSKIMKSITRDIA-K-HSPNAIIVVLTN 128 (315)
T ss_dssp ECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHH-H-HCTTCEEEECCS
T ss_pred EeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH-H-hCCCeEEEECCC
Confidence 9973221 234444443 2 357778777764
No 218
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=98.13 E-value=3.7e-06 Score=81.22 Aligned_cols=71 Identities=24% Similarity=0.357 Sum_probs=57.7
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCC-eEEEEcCCCCcH-HHHHhCCCce--ecChhhHhhcCCCEEEEecCchh
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHH-TLLVHSRSDHSP-AVRQQLNAPF--FADLNDLCELHPDVVLLSTSILS 100 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~-~V~~~dr~~~~~-~~a~~~g~~~--~~~~~~~~~~~aDvVIlavp~~~ 100 (335)
..+++|+|||+|.||..++..++..|+ +|+++||+++.. +.+.+.|... ..++.+++ .++|+||.|||...
T Consensus 165 l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~l~~~l-~~aDvVi~at~~~~ 239 (404)
T 1gpj_A 165 LHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRFDELVDHL-ARSDVVVSATAAPH 239 (404)
T ss_dssp CTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEECCGGGHHHHH-HTCSEEEECCSSSS
T ss_pred ccCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCceecHHhHHHHh-cCCCEEEEccCCCC
Confidence 468899999999999999999999998 999999998664 5666667642 23555666 78999999998654
No 219
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=98.13 E-value=3.2e-06 Score=82.45 Aligned_cols=80 Identities=15% Similarity=0.244 Sum_probs=61.8
Q ss_pred CCCCeEEEEcc----cHHHHHHHHHHHHc--CCeE-EEEcCCCCcH-HHHHhCCCc---eecChhhHhh-cCCCEEEEec
Q 044593 29 STSLKIAVIGF----GNFGQFLAKAFARH--HHTL-LVHSRSDHSP-AVRQQLNAP---FFADLNDLCE-LHPDVVLLST 96 (335)
Q Consensus 29 ~~~~kI~IIG~----G~mG~siA~~L~~~--G~~V-~~~dr~~~~~-~~a~~~g~~---~~~~~~~~~~-~~aDvVIlav 96 (335)
|+.+||+|||+ |.||..++..|.+. +++| .++|++++.. +.+.+.|+. .+++.++++. .+.|+|++||
T Consensus 18 m~~irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~ll~~~~vD~V~i~t 97 (438)
T 3btv_A 18 AAPIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQRLKLSNATAFPTLESFASSSTIDMIVIAI 97 (438)
T ss_dssp -CCEEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTCTTCEEESSHHHHHHCSSCSEEEECS
T ss_pred cCCCEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCCcceeeCCHHHHhcCCCCCEEEEeC
Confidence 45679999999 99999999999886 5676 5789998654 445667775 6788888872 2699999999
Q ss_pred CchhHHHHHhhc
Q 044593 97 SILSTQSVLKSI 108 (335)
Q Consensus 97 p~~~~~~vl~~l 108 (335)
|.....+++...
T Consensus 98 p~~~H~~~~~~a 109 (438)
T 3btv_A 98 QVASHYEVVMPL 109 (438)
T ss_dssp CHHHHHHHHHHH
T ss_pred CcHHHHHHHHHH
Confidence 998766555543
No 220
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=98.13 E-value=7.1e-06 Score=77.84 Aligned_cols=82 Identities=21% Similarity=0.157 Sum_probs=58.6
Q ss_pred cCCCCCeEEEEcccHHHHHHHHHHHHc--------CCeE-EEEcCCCCcH-HHHHhCCCc-eecChhhHhh-cCCCEEEE
Q 044593 27 VKSTSLKIAVIGFGNFGQFLAKAFARH--------HHTL-LVHSRSDHSP-AVRQQLNAP-FFADLNDLCE-LHPDVVLL 94 (335)
Q Consensus 27 ~~~~~~kI~IIG~G~mG~siA~~L~~~--------G~~V-~~~dr~~~~~-~~a~~~g~~-~~~~~~~~~~-~~aDvVIl 94 (335)
+.|+.-||||||+|.||...+.++... +.+| .++|++++.. +.+.+.|+. .++|.++++. .+.|+|++
T Consensus 21 ~~MkkirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~I 100 (393)
T 4fb5_A 21 QSMKPLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFEKATADWRALIADPEVDVVSV 100 (393)
T ss_dssp ---CCCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCSEEESCHHHHHHCTTCCEEEE
T ss_pred cCCCCccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCCeecCCHHHHhcCCCCcEEEE
Confidence 456777999999999999888777542 4565 5779998765 556677875 6788888872 36899999
Q ss_pred ecCchhHHHHHhhc
Q 044593 95 STSILSTQSVLKSI 108 (335)
Q Consensus 95 avp~~~~~~vl~~l 108 (335)
|||...-.++....
T Consensus 101 atP~~~H~~~a~~a 114 (393)
T 4fb5_A 101 TTPNQFHAEMAIAA 114 (393)
T ss_dssp CSCGGGHHHHHHHH
T ss_pred CCChHHHHHHHHHH
Confidence 99999866655543
No 221
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=98.12 E-value=5.7e-06 Score=78.36 Aligned_cols=80 Identities=19% Similarity=0.175 Sum_probs=60.7
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHc-CCeE-EEEcCCCCcH-HHHHhCCC----ceecChhhHhh-cCCCEEEEecCchh
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARH-HHTL-LVHSRSDHSP-AVRQQLNA----PFFADLNDLCE-LHPDVVLLSTSILS 100 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~-G~~V-~~~dr~~~~~-~~a~~~g~----~~~~~~~~~~~-~~aDvVIlavp~~~ 100 (335)
++++||+|||+|.||..++..|.+. ++++ .++|++++.. +.+.+.|+ ..+.+.++++. .++|+|++|||...
T Consensus 4 ~~~~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~~~~~~~~~a~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~ 83 (362)
T 1ydw_A 4 ETQIRIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHGSYESLLEDPEIDALYVPLPTSL 83 (362)
T ss_dssp --CEEEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEESSHHHHHHCTTCCEEEECCCGGG
T ss_pred CCceEEEEECchHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCCCeeeCCHHHHhcCCCCCEEEEcCChHH
Confidence 4568999999999999999999875 5665 5789988654 45566674 45678888762 26999999999998
Q ss_pred HHHHHhhc
Q 044593 101 TQSVLKSI 108 (335)
Q Consensus 101 ~~~vl~~l 108 (335)
..+++...
T Consensus 84 h~~~~~~a 91 (362)
T 1ydw_A 84 HVEWAIKA 91 (362)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77766654
No 222
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=98.10 E-value=1.1e-05 Score=75.66 Aligned_cols=72 Identities=11% Similarity=0.093 Sum_probs=51.2
Q ss_pred cCCCCCeEEEEcccHHHHHHHHHHHHcCC--eEEEEcCCCCcHH-HHHh--C------CCceecChhhHhhcCCCEEEEe
Q 044593 27 VKSTSLKIAVIGFGNFGQFLAKAFARHHH--TLLVHSRSDHSPA-VRQQ--L------NAPFFADLNDLCELHPDVVLLS 95 (335)
Q Consensus 27 ~~~~~~kI~IIG~G~mG~siA~~L~~~G~--~V~~~dr~~~~~~-~a~~--~------g~~~~~~~~~~~~~~aDvVIla 95 (335)
+..+.+||+|||+|.+|.+++..|...+. +|.++|++++..+ .+.+ . .+....+..+.+ ++||+||++
T Consensus 5 ~~~~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~-~~aDvVii~ 83 (326)
T 2zqz_A 5 TDKDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYSAEYSDA-KDADLVVIT 83 (326)
T ss_dssp -CCCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGG-GGCSEEEEC
T ss_pred ccCCCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEECCHHHh-CCCCEEEEc
Confidence 34566899999999999999999998886 8999999875442 1222 1 122223334445 799999999
Q ss_pred cCch
Q 044593 96 TSIL 99 (335)
Q Consensus 96 vp~~ 99 (335)
.+..
T Consensus 84 ag~~ 87 (326)
T 2zqz_A 84 AGAP 87 (326)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 8654
No 223
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=98.09 E-value=1.9e-05 Score=73.72 Aligned_cols=90 Identities=18% Similarity=0.265 Sum_probs=60.4
Q ss_pred CeEEEEcccHHHHHHHHHHHHcCC--eEEEEcCCCCcHH-HHHh---------CCCcee-cChhhHhhcCCCEEEEecCc
Q 044593 32 LKIAVIGFGNFGQFLAKAFARHHH--TLLVHSRSDHSPA-VRQQ---------LNAPFF-ADLNDLCELHPDVVLLSTSI 98 (335)
Q Consensus 32 ~kI~IIG~G~mG~siA~~L~~~G~--~V~~~dr~~~~~~-~a~~---------~g~~~~-~~~~~~~~~~aDvVIlavp~ 98 (335)
|||+|||+|.||.++|..|...|+ +|+++|++++..+ .+.+ ...... ++..+.+ ++||+||++.+.
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~~~a~-~~aDvVii~ag~ 79 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTNDYGPT-EDSDVCIITAGL 79 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEESSSGGG-TTCSEEEECCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECCCHHHh-CCCCEEEECCCC
Confidence 799999999999999999999887 8999999986532 1111 122222 2334445 799999998754
Q ss_pred hh----------------HHHHHhhccccccCCccEEEEcCC
Q 044593 99 LS----------------TQSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 99 ~~----------------~~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
.. +.++.+.+. . ..|+.+|+.+++
T Consensus 80 ~~kpG~~R~dl~~~N~~i~~~i~~~i~-~-~~p~a~vivvtN 119 (314)
T 3nep_X 80 PRSPGMSRDDLLAKNTEIVGGVTEQFV-E-GSPDSTIIVVAN 119 (314)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHH-T-TCTTCEEEECCS
T ss_pred CCCCCCCHHHHHHhhHHHHHHHHHHHH-H-hCCCcEEEecCC
Confidence 32 233334442 2 357778777764
No 224
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=98.07 E-value=1.4e-05 Score=74.30 Aligned_cols=88 Identities=17% Similarity=0.203 Sum_probs=61.5
Q ss_pred eEEEEcccHHHHHHHHHHHHcCC-eEEEEcCCCCcHHH-HHh---------CCC--ceecChhhHhhcCCCEEEEecCch
Q 044593 33 KIAVIGFGNFGQFLAKAFARHHH-TLLVHSRSDHSPAV-RQQ---------LNA--PFFADLNDLCELHPDVVLLSTSIL 99 (335)
Q Consensus 33 kI~IIG~G~mG~siA~~L~~~G~-~V~~~dr~~~~~~~-a~~---------~g~--~~~~~~~~~~~~~aDvVIlavp~~ 99 (335)
||+|||+|.||.+++..+...|+ +|.++|++++..+. +.+ ... ..+++.+ .+ ++||+||++.+..
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~~-a~-~~aD~Vi~~ag~~ 78 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGSNSYE-DM-RGSDIVLVTAGIG 78 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCGG-GG-TTCSEEEECCSCC
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEECCCHH-Hh-CCCCEEEEeCCCC
Confidence 79999999999999999998888 79999999865431 111 122 2235654 45 8999999997644
Q ss_pred h----------------HHHHHhhccccccCCccEEEEcCC
Q 044593 100 S----------------TQSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 100 ~----------------~~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
. +.++.+++. . ..++++++.+++
T Consensus 79 ~k~G~~r~dl~~~n~~i~~~i~~~i~-~-~~p~a~iiv~tN 117 (308)
T 2d4a_B 79 RKPGMTREQLLEANANTMADLAEKIK-A-YAKDAIVVITTN 117 (308)
T ss_dssp CCSSCCTHHHHHHHHHHHHHHHHHHH-H-HCTTCEEEECCS
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHH-H-HCCCeEEEEeCC
Confidence 3 456666663 2 347777766654
No 225
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=98.07 E-value=7.7e-06 Score=79.20 Aligned_cols=93 Identities=13% Similarity=0.238 Sum_probs=66.7
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCcee----cChhhHh---hcCCCEEEEecCchhHH
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFF----ADLNDLC---ELHPDVVLLSTSILSTQ 102 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~----~~~~~~~---~~~aDvVIlavp~~~~~ 102 (335)
..++|.|||+|.+|..+++.|.+.|++|+++|+|++..+.+++.|+... ++.+.+. ..++|+||+|++.+...
T Consensus 3 ~~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~~~~~n 82 (413)
T 3l9w_A 3 HGMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQTN 82 (413)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCSSHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCCChHHH
Confidence 4578999999999999999999999999999999998887888887532 2322221 16899999999987654
Q ss_pred HHHhhccccccCCc-cEEEEcC
Q 044593 103 SVLKSIPFQRLKRS-TLFVDVL 123 (335)
Q Consensus 103 ~vl~~l~~~~l~~~-~iVvd~~ 123 (335)
..+.... ..+.++ .+|+-+.
T Consensus 83 ~~i~~~a-r~~~p~~~Iiara~ 103 (413)
T 3l9w_A 83 LQLTEMV-KEHFPHLQIIARAR 103 (413)
T ss_dssp HHHHHHH-HHHCTTCEEEEEES
T ss_pred HHHHHHH-HHhCCCCeEEEEEC
Confidence 3333332 234455 4555443
No 226
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=98.06 E-value=1.9e-06 Score=78.79 Aligned_cols=96 Identities=15% Similarity=0.207 Sum_probs=63.4
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcH-HHHHhCCC--c-eecChhhHhhc-CCCEEEEecCchhHHH
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSP-AVRQQLNA--P-FFADLNDLCEL-HPDVVLLSTSILSTQS 103 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~-~~a~~~g~--~-~~~~~~~~~~~-~aDvVIlavp~~~~~~ 103 (335)
...++|+|+|+|.||.+++..|.+.|.+|++++|+++.. +.+.+.+. . ...+.+++. . ++|+||.|||......
T Consensus 117 ~~~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~~~~~~~~~-~~~~DivIn~t~~~~~~~ 195 (272)
T 1p77_A 117 RPNQHVLILGAGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSIP-LQTYDLVINATSAGLSGG 195 (272)
T ss_dssp CTTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCC-CSCCSEEEECCCC-----
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeEEeeHHHhc-cCCCCEEEECCCCCCCCC
Confidence 356899999999999999999999999999999997654 33333221 1 122334442 3 7999999999876543
Q ss_pred HHhhccccccCCccEEEEcCCCC
Q 044593 104 VLKSIPFQRLKRSTLFVDVLSVK 126 (335)
Q Consensus 104 vl~~l~~~~l~~~~iVvd~~SvK 126 (335)
+ ..+....++++.+|+|+....
T Consensus 196 ~-~~i~~~~l~~~~~v~D~~y~p 217 (272)
T 1p77_A 196 T-ASVDAEILKLGSAFYDMQYAK 217 (272)
T ss_dssp ---CCCHHHHHHCSCEEESCCCT
T ss_pred C-CCCCHHHcCCCCEEEEeeCCC
Confidence 2 123223356788999997653
No 227
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=98.06 E-value=9.4e-06 Score=76.11 Aligned_cols=95 Identities=13% Similarity=0.143 Sum_probs=62.5
Q ss_pred cCCCCCeEEEEcccHHHHHHHHHHHHcCC--eEEEEcCCCCcHH-HHHhC--------CCceecChhhHhhcCCCEEEEe
Q 044593 27 VKSTSLKIAVIGFGNFGQFLAKAFARHHH--TLLVHSRSDHSPA-VRQQL--------NAPFFADLNDLCELHPDVVLLS 95 (335)
Q Consensus 27 ~~~~~~kI~IIG~G~mG~siA~~L~~~G~--~V~~~dr~~~~~~-~a~~~--------g~~~~~~~~~~~~~~aDvVIla 95 (335)
.+...+||+|||+|.||+++|..|...|+ ++.++|++++..+ .+.++ ++...++..+.+ ++||+||++
T Consensus 5 ~~~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~~~a~-~~aDiVvi~ 83 (326)
T 3vku_A 5 TDKDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAEYSDA-KDADLVVIT 83 (326)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGG-TTCSEEEEC
T ss_pred ccCCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECcHHHh-cCCCEEEEC
Confidence 35678899999999999999999999887 8999999875432 11111 222333334445 799999998
Q ss_pred cCchh----------------HHHHHhhccccccCCccEEEEcCC
Q 044593 96 TSILS----------------TQSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 96 vp~~~----------------~~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
..... +.++.+.+. . ..|+++++.+++
T Consensus 84 ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~-~-~~p~a~ilvvtN 126 (326)
T 3vku_A 84 AGAPQKPGETRLDLVNKNLKILKSIVDPIV-D-SGFNGIFLVAAN 126 (326)
T ss_dssp CCCC----------------CHHHHHHHHH-T-TTCCSEEEECSS
T ss_pred CCCCCCCCchHHHHHHHHHHHHHHHHHHHH-h-cCCceEEEEccC
Confidence 74321 234444442 2 346777777754
No 228
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=98.05 E-value=9.3e-06 Score=74.02 Aligned_cols=97 Identities=14% Similarity=0.172 Sum_probs=67.3
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcH-HHHHhCCC---ceecChhhHhhcCCCEEEEecCchhHHHH
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSP-AVRQQLNA---PFFADLNDLCELHPDVVLLSTSILSTQSV 104 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~-~~a~~~g~---~~~~~~~~~~~~~aDvVIlavp~~~~~~v 104 (335)
...+++.|+|+|.||.+++..|.+.|.+|++++|+++.. +.+.+.+. ....+.+++...++|+||.|+|......+
T Consensus 117 l~~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~DivVn~t~~~~~~~~ 196 (271)
T 1nyt_A 117 RPGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDELEGHEFDLIINATSSGISGDI 196 (271)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGGTTCCCSEEEECCSCGGGTCC
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEecHHHhccCCCCEEEECCCCCCCCCC
Confidence 356899999999999999999999999999999997654 34444332 11223333310279999999997654221
Q ss_pred HhhccccccCCccEEEEcCCCC
Q 044593 105 LKSIPFQRLKRSTLFVDVLSVK 126 (335)
Q Consensus 105 l~~l~~~~l~~~~iVvd~~SvK 126 (335)
..+....++++.+++|+....
T Consensus 197 -~~i~~~~l~~~~~v~D~~y~p 217 (271)
T 1nyt_A 197 -PAIPSSLIHPGIYCYDMFYQK 217 (271)
T ss_dssp -CCCCGGGCCTTCEEEESCCCS
T ss_pred -CCCCHHHcCCCCEEEEeccCC
Confidence 123223467889999997653
No 229
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=98.04 E-value=4.7e-06 Score=78.44 Aligned_cols=77 Identities=18% Similarity=0.185 Sum_probs=56.3
Q ss_pred CCeEEEEcccHHHHH-HHHHH-HH-cCCeEE-EEcCCCCcHHHHHh-CCCceecChhhHhhc--CCCEEEEecCchhHHH
Q 044593 31 SLKIAVIGFGNFGQF-LAKAF-AR-HHHTLL-VHSRSDHSPAVRQQ-LNAPFFADLNDLCEL--HPDVVLLSTSILSTQS 103 (335)
Q Consensus 31 ~~kI~IIG~G~mG~s-iA~~L-~~-~G~~V~-~~dr~~~~~~~a~~-~g~~~~~~~~~~~~~--~aDvVIlavp~~~~~~ 103 (335)
++||+|||+|.||.. .+.++ .. .+++|+ ++|++++..+.+.+ .++..+++.++++ . +.|+|++|+|.....+
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~ll-~~~~~D~V~i~tp~~~h~~ 80 (345)
T 3f4l_A 2 VINCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQAPIYSHIHFTSDLDEVL-NDPDVKLVVVCTHADSHFE 80 (345)
T ss_dssp CEEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECSSCCGGGGSGGGTTCEEESCTHHHH-TCTTEEEEEECSCGGGHHH
T ss_pred ceEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcCCHhHHHHHHhcCCCceECCHHHHh-cCCCCCEEEEcCChHHHHH
Confidence 479999999999986 45523 33 367775 78999876543333 3666788888887 4 4899999999998766
Q ss_pred HHhhc
Q 044593 104 VLKSI 108 (335)
Q Consensus 104 vl~~l 108 (335)
+....
T Consensus 81 ~~~~a 85 (345)
T 3f4l_A 81 YAKRA 85 (345)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66544
No 230
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=98.04 E-value=7.5e-06 Score=77.63 Aligned_cols=78 Identities=19% Similarity=0.258 Sum_probs=58.9
Q ss_pred CCCCeEEEEcccHHHHH-HHHHHHHc-CCeE-EEEcCCCCcHHHHHhC-CCceecChhhHhh-cCCCEEEEecCchhHHH
Q 044593 29 STSLKIAVIGFGNFGQF-LAKAFARH-HHTL-LVHSRSDHSPAVRQQL-NAPFFADLNDLCE-LHPDVVLLSTSILSTQS 103 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~s-iA~~L~~~-G~~V-~~~dr~~~~~~~a~~~-g~~~~~~~~~~~~-~~aDvVIlavp~~~~~~ 103 (335)
|+++||+|||+|.||.. .+..+.+. +++| .++|++++.. +.+. ++..+++.++++. .+.|+|++|||.....+
T Consensus 3 ~~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~--~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~ 80 (362)
T 3fhl_A 3 LEIIKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERSKELS--KERYPQASIVRSFKELTEDPEIDLIVVNTPDNTHYE 80 (362)
T ss_dssp CCCEEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECSSCCGG--GTTCTTSEEESCSHHHHTCTTCCEEEECSCGGGHHH
T ss_pred CCceEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHH--HHhCCCCceECCHHHHhcCCCCCEEEEeCChHHHHH
Confidence 45689999999999997 67777765 6776 4779998653 3444 5667788888872 24999999999988666
Q ss_pred HHhhc
Q 044593 104 VLKSI 108 (335)
Q Consensus 104 vl~~l 108 (335)
+....
T Consensus 81 ~~~~a 85 (362)
T 3fhl_A 81 YAGMA 85 (362)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66544
No 231
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=98.03 E-value=5e-06 Score=79.92 Aligned_cols=81 Identities=21% Similarity=0.216 Sum_probs=63.4
Q ss_pred CCCCCeEEEEcccH---HHHHHHHHHHHcC-CeEE--EEcCCCCcH-HHHHhCCC---ceecChhhHhhc------CCCE
Q 044593 28 KSTSLKIAVIGFGN---FGQFLAKAFARHH-HTLL--VHSRSDHSP-AVRQQLNA---PFFADLNDLCEL------HPDV 91 (335)
Q Consensus 28 ~~~~~kI~IIG~G~---mG~siA~~L~~~G-~~V~--~~dr~~~~~-~~a~~~g~---~~~~~~~~~~~~------~aDv 91 (335)
.|+.+||||||+|. ||...+.++...+ ++++ ++|++++.. +.+.+.|+ ..+++.++++.. +.|+
T Consensus 9 ~m~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~ 88 (398)
T 3dty_A 9 IPQPIRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDIDPIRGSAFGEQLGVDSERCYADYLSMFEQEARRADGIQA 88 (398)
T ss_dssp SCSCEEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCSSHHHHHHHHHHTTCCGGGBCSSHHHHHHHHTTCTTCCSE
T ss_pred ccCcceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCCCHHHHHHHHHHhCCCcceeeCCHHHHHhcccccCCCCCE
Confidence 36678999999999 9999999888765 6775 469998654 45677888 567888888721 4999
Q ss_pred EEEecCchhHHHHHhhc
Q 044593 92 VLLSTSILSTQSVLKSI 108 (335)
Q Consensus 92 VIlavp~~~~~~vl~~l 108 (335)
|++|||...-.++....
T Consensus 89 V~i~tp~~~H~~~~~~a 105 (398)
T 3dty_A 89 VSIATPNGTHYSITKAA 105 (398)
T ss_dssp EEEESCGGGHHHHHHHH
T ss_pred EEECCCcHHHHHHHHHH
Confidence 99999999866666544
No 232
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=98.03 E-value=5.9e-06 Score=80.89 Aligned_cols=91 Identities=13% Similarity=0.108 Sum_probs=60.2
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHH-HhCC-Cc----eec---ChhhHhhcCCCEEEEecCch
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVR-QQLN-AP----FFA---DLNDLCELHPDVVLLSTSIL 99 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a-~~~g-~~----~~~---~~~~~~~~~aDvVIlavp~~ 99 (335)
|++++|+|+|+|.||..++..|.+.|++|+++||+++..+.. ...+ +. ... +..+++ .++|+||.|+|..
T Consensus 1 M~~k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l-~~~DvVIn~a~~~ 79 (450)
T 1ff9_A 1 MATKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEV-AKHDLVISLIPYT 79 (450)
T ss_dssp -CCCEEEEECCSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHH-TTSSEEEECCC--
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHH-cCCcEEEECCccc
Confidence 356799999999999999999999999999999987554322 2222 21 112 233455 6899999999976
Q ss_pred hHHHHHhhccccccCCccEEEEcCC
Q 044593 100 STQSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 100 ~~~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
....+... .+.++..++|.+.
T Consensus 80 ~~~~i~~a----~l~~g~~vvd~~~ 100 (450)
T 1ff9_A 80 FHATVIKS----AIRQKKHVVTTSY 100 (450)
T ss_dssp CHHHHHHH----HHHHTCEEEESSC
T ss_pred cchHHHHH----HHhCCCeEEEeec
Confidence 54433322 2345566777653
No 233
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=98.03 E-value=8.6e-06 Score=77.33 Aligned_cols=78 Identities=19% Similarity=0.281 Sum_probs=57.7
Q ss_pred CCCeEEEEcccHHHHH-HHHHHHHc-CCeEE-EEcCCCCcHHHHHhCCCceecChhhHhh-cCCCEEEEecCchhHHHHH
Q 044593 30 TSLKIAVIGFGNFGQF-LAKAFARH-HHTLL-VHSRSDHSPAVRQQLNAPFFADLNDLCE-LHPDVVLLSTSILSTQSVL 105 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~s-iA~~L~~~-G~~V~-~~dr~~~~~~~a~~~g~~~~~~~~~~~~-~~aDvVIlavp~~~~~~vl 105 (335)
+++||+|||+|.||.. .+..+.+. +++|+ ++|++++..+ ....+...+++.++++. .+.|+|++|||.....+++
T Consensus 6 ~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~-~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~H~~~~ 84 (364)
T 3e82_A 6 NTINIALIGYGFVGKTFHAPLIRSVPGLNLAFVASRDEEKVK-RDLPDVTVIASPEAAVQHPDVDLVVIASPNATHAPLA 84 (364)
T ss_dssp -CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHH-HHCTTSEEESCHHHHHTCTTCSEEEECSCGGGHHHHH
T ss_pred CcceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHH-hhCCCCcEECCHHHHhcCCCCCEEEEeCChHHHHHHH
Confidence 4579999999999996 67777765 67774 7799875443 22235667788998872 2799999999998876666
Q ss_pred hhc
Q 044593 106 KSI 108 (335)
Q Consensus 106 ~~l 108 (335)
...
T Consensus 85 ~~a 87 (364)
T 3e82_A 85 RLA 87 (364)
T ss_dssp HHH
T ss_pred HHH
Confidence 544
No 234
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=98.02 E-value=1e-05 Score=76.26 Aligned_cols=77 Identities=17% Similarity=0.247 Sum_probs=57.4
Q ss_pred CCeEEEEcccHHHH-HHHHHHHHc-CCeE-EEEcCCCCcHHHHHh---CCCceecChhhHhh-cCCCEEEEecCchhHHH
Q 044593 31 SLKIAVIGFGNFGQ-FLAKAFARH-HHTL-LVHSRSDHSPAVRQQ---LNAPFFADLNDLCE-LHPDVVLLSTSILSTQS 103 (335)
Q Consensus 31 ~~kI~IIG~G~mG~-siA~~L~~~-G~~V-~~~dr~~~~~~~a~~---~g~~~~~~~~~~~~-~~aDvVIlavp~~~~~~ 103 (335)
++||+|||+|.||. ..+..+.+. +++| .++|++ ...+.+.+ .++..+++.++++. .+.|+|++|||.....+
T Consensus 2 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~-~~~~~a~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~ 80 (349)
T 3i23_A 2 TVKMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLH-VNEKAAAPFKEKGVNFTADLNELLTDPEIELITICTPAHTHYD 80 (349)
T ss_dssp CEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTT-CCHHHHHHHHTTTCEEESCTHHHHSCTTCCEEEECSCGGGHHH
T ss_pred eeEEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCC-HHHHHHHhhCCCCCeEECCHHHHhcCCCCCEEEEeCCcHHHHH
Confidence 46999999999998 567777664 5676 477988 44444444 46677888998872 24899999999988766
Q ss_pred HHhhc
Q 044593 104 VLKSI 108 (335)
Q Consensus 104 vl~~l 108 (335)
+....
T Consensus 81 ~~~~a 85 (349)
T 3i23_A 81 LAKQA 85 (349)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66544
No 235
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=98.01 E-value=8.7e-06 Score=74.44 Aligned_cols=95 Identities=18% Similarity=0.192 Sum_probs=65.9
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCC-eEEEEcCCCCcH-HHHHhCCC--ceecChhhHhhcCCCEEEEecCchhHHHHH
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHHH-TLLVHSRSDHSP-AVRQQLNA--PFFADLNDLCELHPDVVLLSTSILSTQSVL 105 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G~-~V~~~dr~~~~~-~~a~~~g~--~~~~~~~~~~~~~aDvVIlavp~~~~~~vl 105 (335)
..+++.|+|+|.+|.+++..|.+.|. +|++++|+++.. +.+.+.+. ....+.+++...++|+||.|||.......
T Consensus 119 ~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~l~~~~~DivInaTp~gm~~~~- 197 (272)
T 3pwz_A 119 RNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYEALEGQSFDIVVNATSASLTADL- 197 (272)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSGGGTTCCCSEEEECSSGGGGTCC-
T ss_pred cCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHHHhcccCCCEEEECCCCCCCCCC-
Confidence 57899999999999999999999996 999999998654 33444331 11122333311479999999998753211
Q ss_pred hhccccccCCccEEEEcCCC
Q 044593 106 KSIPFQRLKRSTLFVDVLSV 125 (335)
Q Consensus 106 ~~l~~~~l~~~~iVvd~~Sv 125 (335)
..+....++++.+|+|+...
T Consensus 198 ~~i~~~~l~~~~~V~DlvY~ 217 (272)
T 3pwz_A 198 PPLPADVLGEAALAYELAYG 217 (272)
T ss_dssp CCCCGGGGTTCSEEEESSCS
T ss_pred CCCCHHHhCcCCEEEEeecC
Confidence 11222457889999999654
No 236
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=98.01 E-value=1.3e-05 Score=74.91 Aligned_cols=92 Identities=15% Similarity=0.236 Sum_probs=60.6
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCC--eEEEEcCCCCcHH-HHHhC--------CCceecChhhHhhcCCCEEEEecCc
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHHH--TLLVHSRSDHSPA-VRQQL--------NAPFFADLNDLCELHPDVVLLSTSI 98 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G~--~V~~~dr~~~~~~-~a~~~--------g~~~~~~~~~~~~~~aDvVIlavp~ 98 (335)
+.+||+|||+|.+|.+++..|...+. +|.++|++++..+ .+.++ .+....+..+.+ ++||+||++.+.
T Consensus 4 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~~~~~a~-~~aDvVii~ag~ 82 (318)
T 1ez4_A 4 NHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSDC-KDADLVVITAGA 82 (318)
T ss_dssp TBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGGGG-TTCSEEEECCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEECCHHHh-CCCCEEEECCCC
Confidence 34899999999999999999998886 8999999875443 12221 222223334445 899999999865
Q ss_pred hh----------------HHHHHhhccccccCCccEEEEcCC
Q 044593 99 LS----------------TQSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 99 ~~----------------~~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
.. +.++.+.+. . ..++++|+.++.
T Consensus 83 ~~~~g~~R~dl~~~n~~i~~~i~~~i~-~-~~p~a~iiv~tN 122 (318)
T 1ez4_A 83 PQKPGESRLDLVNKNLNILSSIVKPVV-D-SGFDGIFLVAAN 122 (318)
T ss_dssp ----------CHHHHHHHHHHHHHHHH-H-TTCCSEEEECSS
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHH-H-hCCCeEEEEeCC
Confidence 43 233334442 2 357777777643
No 237
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=98.01 E-value=1.5e-05 Score=73.29 Aligned_cols=106 Identities=14% Similarity=0.104 Sum_probs=71.1
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCC-eEEEEcCCCCcHH-HHHhC-----CCc--ee--cChhhHhhcCCCEEEEecC
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHH-TLLVHSRSDHSPA-VRQQL-----NAP--FF--ADLNDLCELHPDVVLLSTS 97 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~-~V~~~dr~~~~~~-~a~~~-----g~~--~~--~~~~~~~~~~aDvVIlavp 97 (335)
...+++.|+|+|.+|.+++..|.+.|. +|++++|+++..+ .+.+. ++. .. .++.+.+ .++|+||-|||
T Consensus 125 l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l-~~~DiVInaTp 203 (283)
T 3jyo_A 125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVI-AAADGVVNATP 203 (283)
T ss_dssp CCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHH-HHSSEEEECSS
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHH-hcCCEEEECCC
Confidence 457899999999999999999999998 7999999976543 23222 121 22 2555555 68999999999
Q ss_pred chhHHHHHhhccccccCCccEEEEcCCC--CchHHHHHHh
Q 044593 98 ILSTQSVLKSIPFQRLKRSTLFVDVLSV--KEFPRNLFLK 135 (335)
Q Consensus 98 ~~~~~~vl~~l~~~~l~~~~iVvd~~Sv--K~~~~~~l~~ 135 (335)
.......-..+....++++.+|+|+.-. .+..++..++
T Consensus 204 ~Gm~~~~~~pi~~~~l~~~~~v~DlvY~P~~T~ll~~A~~ 243 (283)
T 3jyo_A 204 MGMPAHPGTAFDVSCLTKDHWVGDVVYMPIETELLKAARA 243 (283)
T ss_dssp TTSTTSCSCSSCGGGCCTTCEEEECCCSSSSCHHHHHHHH
T ss_pred CCCCCCCCCCCCHHHhCCCCEEEEecCCCCCCHHHHHHHH
Confidence 7643210011222357788999998644 2344444443
No 238
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=98.01 E-value=8e-06 Score=77.07 Aligned_cols=78 Identities=17% Similarity=0.189 Sum_probs=58.0
Q ss_pred CCCeEEEEcccHHHHH-HHHHHHHc-CCeEE-EEcCCCCcHHHHHhCCCceecChhhHhh-cCCCEEEEecCchhHHHHH
Q 044593 30 TSLKIAVIGFGNFGQF-LAKAFARH-HHTLL-VHSRSDHSPAVRQQLNAPFFADLNDLCE-LHPDVVLLSTSILSTQSVL 105 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~s-iA~~L~~~-G~~V~-~~dr~~~~~~~a~~~g~~~~~~~~~~~~-~~aDvVIlavp~~~~~~vl 105 (335)
+++||+|||+|.||.. .+..+.+. +++|+ ++|++++..+ ....+...+++.++++. .+.|+|++|||.....+++
T Consensus 6 ~~~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~~~~~~~-~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~ 84 (352)
T 3kux_A 6 DKIKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSSDASKVH-ADWPAIPVVSDPQMLFNDPSIDLIVIPTPNDTHFPLA 84 (352)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHH-TTCSSCCEESCHHHHHHCSSCCEEEECSCTTTHHHHH
T ss_pred CCceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECCCHHHHH-hhCCCCceECCHHHHhcCCCCCEEEEeCChHHHHHHH
Confidence 4579999999999996 77888765 56764 7899876544 22235567788998872 2499999999998866665
Q ss_pred hhc
Q 044593 106 KSI 108 (335)
Q Consensus 106 ~~l 108 (335)
...
T Consensus 85 ~~a 87 (352)
T 3kux_A 85 QSA 87 (352)
T ss_dssp HHH
T ss_pred HHH
Confidence 544
No 239
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=98.00 E-value=6.1e-06 Score=79.88 Aligned_cols=80 Identities=15% Similarity=0.218 Sum_probs=61.3
Q ss_pred CCCCeEEEEcccH---HHHHHHHHHHHcC-CeEE--EEcCCCCcH-HHHHhCCC---ceecChhhHhhc------CCCEE
Q 044593 29 STSLKIAVIGFGN---FGQFLAKAFARHH-HTLL--VHSRSDHSP-AVRQQLNA---PFFADLNDLCEL------HPDVV 92 (335)
Q Consensus 29 ~~~~kI~IIG~G~---mG~siA~~L~~~G-~~V~--~~dr~~~~~-~~a~~~g~---~~~~~~~~~~~~------~aDvV 92 (335)
|+.+||+|||+|. ||...+.++...+ ++++ ++|++++.. +.+.+.|+ ..+++.++++.. +.|+|
T Consensus 35 m~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~V 114 (417)
T 3v5n_A 35 QKRIRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSSTPEKAEASGRELGLDPSRVYSDFKEMAIREAKLKNGIEAV 114 (417)
T ss_dssp CCCEEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCSSHHHHHHHHHHHTCCGGGBCSCHHHHHHHHHHCTTCCSEE
T ss_pred CCcceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHcCCCcccccCCHHHHHhcccccCCCCcEE
Confidence 5567999999999 9999999888776 5765 579998654 45666788 467888888721 49999
Q ss_pred EEecCchhHHHHHhhc
Q 044593 93 LLSTSILSTQSVLKSI 108 (335)
Q Consensus 93 Ilavp~~~~~~vl~~l 108 (335)
++|||.....+++...
T Consensus 115 ~I~tp~~~H~~~~~~a 130 (417)
T 3v5n_A 115 AIVTPNHVHYAAAKEF 130 (417)
T ss_dssp EECSCTTSHHHHHHHH
T ss_pred EECCCcHHHHHHHHHH
Confidence 9999999876666554
No 240
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=98.00 E-value=9.1e-06 Score=72.03 Aligned_cols=92 Identities=10% Similarity=0.070 Sum_probs=65.2
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCce----ecChhh---H-hhcCCCEEEEecCchhH
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPF----FADLND---L-CELHPDVVLLSTSILST 101 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~----~~~~~~---~-~~~~aDvVIlavp~~~~ 101 (335)
..++|.|+|+|.+|..++..|.+.|+ |+++|++++..+.+. .|+.. .++.+. + + .++|.||++++.+..
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-~~~~~i~gd~~~~~~l~~a~i-~~ad~vi~~~~~d~~ 84 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKKVLR-SGANFVHGDPTRVSDLEKANV-RGARAVIVDLESDSE 84 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-TTCEEEESCTTCHHHHHHTTC-TTCSEEEECCSCHHH
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-cCCeEEEcCCCCHHHHHhcCc-chhcEEEEcCCCcHH
Confidence 45789999999999999999999999 999999988776555 66542 222222 2 3 689999999998865
Q ss_pred HHHHhhccccccCCc-cEEEEcCCC
Q 044593 102 QSVLKSIPFQRLKRS-TLFVDVLSV 125 (335)
Q Consensus 102 ~~vl~~l~~~~l~~~-~iVvd~~Sv 125 (335)
...+.... ..+.++ .+|+.+.+.
T Consensus 85 n~~~~~~a-~~~~~~~~iia~~~~~ 108 (234)
T 2aef_A 85 TIHCILGI-RKIDESVRIIAEAERY 108 (234)
T ss_dssp HHHHHHHH-HHHCSSSEEEEECSSG
T ss_pred HHHHHHHH-HHHCCCCeEEEEECCH
Confidence 44433332 234555 677777654
No 241
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=98.00 E-value=9.5e-06 Score=77.11 Aligned_cols=90 Identities=14% Similarity=0.199 Sum_probs=66.3
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCce----e---cChhhHhhcCCCEEEEecCchh--
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPF----F---ADLNDLCELHPDVVLLSTSILS-- 100 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~----~---~~~~~~~~~~aDvVIlavp~~~-- 100 (335)
...+|+|+|+|.+|..++..++..|.+|+++||+++..+.+.+.+... . .+..+.+ .++|+||-|++...
T Consensus 166 ~~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~DvVI~~~~~~~~~ 244 (361)
T 1pjc_A 166 KPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAV-AEADLLIGAVLVPGRR 244 (361)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHH-HTCSEEEECCCCTTSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEeeeCCHHHHHHHH-cCCCEEEECCCcCCCC
Confidence 458999999999999999999999999999999987766555543221 1 1233444 68999999997643
Q ss_pred -----HHHHHhhccccccCCccEEEEcCCC
Q 044593 101 -----TQSVLKSIPFQRLKRSTLFVDVLSV 125 (335)
Q Consensus 101 -----~~~vl~~l~~~~l~~~~iVvd~~Sv 125 (335)
....+ ..++++.+|+|++..
T Consensus 245 ~~~li~~~~~-----~~~~~g~~ivdv~~~ 269 (361)
T 1pjc_A 245 APILVPASLV-----EQMRTGSVIVDVAVD 269 (361)
T ss_dssp CCCCBCHHHH-----TTSCTTCEEEETTCT
T ss_pred CCeecCHHHH-----hhCCCCCEEEEEecC
Confidence 22222 246688999999864
No 242
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=97.99 E-value=1.6e-05 Score=78.50 Aligned_cols=84 Identities=15% Similarity=0.226 Sum_probs=64.6
Q ss_pred cccCCCCCeEEEEcc----cHHHHHHHHHHHHc--CCeE-EEEcCCCCcH-HHHHhCCCc---eecChhhHhh-cCCCEE
Q 044593 25 QYVKSTSLKIAVIGF----GNFGQFLAKAFARH--HHTL-LVHSRSDHSP-AVRQQLNAP---FFADLNDLCE-LHPDVV 92 (335)
Q Consensus 25 ~~~~~~~~kI~IIG~----G~mG~siA~~L~~~--G~~V-~~~dr~~~~~-~~a~~~g~~---~~~~~~~~~~-~~aDvV 92 (335)
+++.|+.+||+|||+ |.||...+..|.+. +++| .++|++++.. +.+.+.|+. .+++.++++. .+.|+|
T Consensus 33 ~~~~m~~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~~~~~d~~ell~~~~vD~V 112 (479)
T 2nvw_A 33 TVPSSRPIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLKHATGFDSLESFAQYKDIDMI 112 (479)
T ss_dssp SSGGGCCEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCTTCEEESCHHHHHHCTTCSEE
T ss_pred CCCCCCcCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCCcceeeCCHHHHhcCCCCCEE
Confidence 334466789999999 99999999999886 6676 5789998654 455667775 6788888872 369999
Q ss_pred EEecCchhHHHHHhhc
Q 044593 93 LLSTSILSTQSVLKSI 108 (335)
Q Consensus 93 Ilavp~~~~~~vl~~l 108 (335)
++|||.....+++...
T Consensus 113 ~I~tp~~~H~~~~~~a 128 (479)
T 2nvw_A 113 VVSVKVPEHYEVVKNI 128 (479)
T ss_dssp EECSCHHHHHHHHHHH
T ss_pred EEcCCcHHHHHHHHHH
Confidence 9999998766655543
No 243
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=97.96 E-value=1e-05 Score=76.08 Aligned_cols=81 Identities=15% Similarity=0.227 Sum_probs=62.1
Q ss_pred CCCCCeEEEEccc-HHHHHHHHHHHHc--CCeE-EEEcCCCCcH-HHHHhCCC-ceecChhhHhh-cCCCEEEEecCchh
Q 044593 28 KSTSLKIAVIGFG-NFGQFLAKAFARH--HHTL-LVHSRSDHSP-AVRQQLNA-PFFADLNDLCE-LHPDVVLLSTSILS 100 (335)
Q Consensus 28 ~~~~~kI~IIG~G-~mG~siA~~L~~~--G~~V-~~~dr~~~~~-~~a~~~g~-~~~~~~~~~~~-~~aDvVIlavp~~~ 100 (335)
+.+.+||+|||+| .+|...+..+.+. ++++ .++|++++.. +.+.+.|+ ..++|.++++. .+.|+|++|||...
T Consensus 15 ~~~~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~ 94 (340)
T 1zh8_A 15 PLRKIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFDSYEELLESGLVDAVDLTLPVEL 94 (340)
T ss_dssp -CCCEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEESCHHHHHHSSCCSEEEECCCGGG
T ss_pred CCCceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeCCchH
Confidence 3456899999999 8999999999876 4566 6789998755 44566676 56788888862 36999999999987
Q ss_pred HHHHHhhc
Q 044593 101 TQSVLKSI 108 (335)
Q Consensus 101 ~~~vl~~l 108 (335)
..++....
T Consensus 95 H~~~~~~a 102 (340)
T 1zh8_A 95 NLPFIEKA 102 (340)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66666544
No 244
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=97.96 E-value=9.9e-06 Score=76.69 Aligned_cols=78 Identities=12% Similarity=0.238 Sum_probs=58.5
Q ss_pred CCCCeEEEEcccHHHHH-HHHHHHHc-CCeE-EEEcCCCCcHHHHHhC-CCceecChhhHhh-cCCCEEEEecCchhHHH
Q 044593 29 STSLKIAVIGFGNFGQF-LAKAFARH-HHTL-LVHSRSDHSPAVRQQL-NAPFFADLNDLCE-LHPDVVLLSTSILSTQS 103 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~s-iA~~L~~~-G~~V-~~~dr~~~~~~~a~~~-g~~~~~~~~~~~~-~~aDvVIlavp~~~~~~ 103 (335)
|+++||||||+|.||.. .+..+.+. +++| .++|++++. .+.+. ++..+++.++++. .+.|+|++|||.....+
T Consensus 3 m~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~--~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~ 80 (358)
T 3gdo_A 3 LDTIKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTSRTEE--VKRDFPDAEVVHELEEITNDPAIELVIVTTPSGLHYE 80 (358)
T ss_dssp TTCEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECSCHHH--HHHHCTTSEEESSTHHHHTCTTCCEEEECSCTTTHHH
T ss_pred CCcceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcCCHHH--HHhhCCCCceECCHHHHhcCCCCCEEEEcCCcHHHHH
Confidence 35679999999999996 67777665 6676 467988754 34444 5667788888872 27999999999988766
Q ss_pred HHhhc
Q 044593 104 VLKSI 108 (335)
Q Consensus 104 vl~~l 108 (335)
+....
T Consensus 81 ~~~~a 85 (358)
T 3gdo_A 81 HTMAC 85 (358)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66544
No 245
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=97.96 E-value=1.5e-05 Score=77.98 Aligned_cols=69 Identities=17% Similarity=0.133 Sum_probs=49.7
Q ss_pred CCeEEEEcccHH-HHHHHHHHHHc-----CCeEEEEcCCC--CcHHH----HH----hCCC----ceecChhhHhhcCCC
Q 044593 31 SLKIAVIGFGNF-GQFLAKAFARH-----HHTLLVHSRSD--HSPAV----RQ----QLNA----PFFADLNDLCELHPD 90 (335)
Q Consensus 31 ~~kI~IIG~G~m-G~siA~~L~~~-----G~~V~~~dr~~--~~~~~----a~----~~g~----~~~~~~~~~~~~~aD 90 (335)
.+||+|||+|.+ |..++..|..+ +.+|++||+++ +..+. +. ..+. ..++|..+.+ ++||
T Consensus 7 ~~KIaVIGaGsv~~~al~~~L~~~~~~l~~~ev~L~Di~~~~e~~~~~~~~~~~~~~~~~~~~~i~~t~D~~eal-~gAD 85 (450)
T 1s6y_A 7 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRRAL-DGAD 85 (450)
T ss_dssp CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHH-TTCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCCCCCCEEEEEEcCCChHHHHHHHHHHHHHHhhcCCCcEEEEeCCHHHHh-CCCC
Confidence 579999999998 88887778773 45899999998 64332 11 1222 2346776666 8999
Q ss_pred EEEEecCchh
Q 044593 91 VVLLSTSILS 100 (335)
Q Consensus 91 vVIlavp~~~ 100 (335)
+||+++|...
T Consensus 86 ~VVitagv~~ 95 (450)
T 1s6y_A 86 FVTTQFRVGG 95 (450)
T ss_dssp EEEECCCTTH
T ss_pred EEEEcCCCCC
Confidence 9999999643
No 246
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=97.95 E-value=1.5e-05 Score=77.80 Aligned_cols=82 Identities=18% Similarity=0.178 Sum_probs=59.5
Q ss_pred cCCCCCeEEEEcccHHHHHHHHHHHHc-CCeE-EEEcCCCCcHHHHH----hCC---Cceec----ChhhHhh-cCCCEE
Q 044593 27 VKSTSLKIAVIGFGNFGQFLAKAFARH-HHTL-LVHSRSDHSPAVRQ----QLN---APFFA----DLNDLCE-LHPDVV 92 (335)
Q Consensus 27 ~~~~~~kI~IIG~G~mG~siA~~L~~~-G~~V-~~~dr~~~~~~~a~----~~g---~~~~~----~~~~~~~-~~aDvV 92 (335)
..|+.+||+|||+|.||...+..|.+. +++| .++|++++..+.+. +.| ...++ +.++++. .+.|+|
T Consensus 16 ~~~~~~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~~~ll~~~~vD~V 95 (444)
T 2ixa_A 16 FNPKKVRIAFIAVGLRGQTHVENMARRDDVEIVAFADPDPYMVGRAQEILKKNGKKPAKVFGNGNDDYKNMLKDKNIDAV 95 (444)
T ss_dssp ---CCEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSCHHHHHHHHHHHHHTTCCCCEEECSSTTTHHHHTTCTTCCEE
T ss_pred CCCCCceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHHHhcCCCCCceeccCCCCHHHHhcCCCCCEE
Confidence 456678999999999999999999875 5676 57899987654332 345 34566 8888872 269999
Q ss_pred EEecCchhHHHHHhhc
Q 044593 93 LLSTSILSTQSVLKSI 108 (335)
Q Consensus 93 Ilavp~~~~~~vl~~l 108 (335)
++|+|.....++....
T Consensus 96 ~i~tp~~~h~~~~~~a 111 (444)
T 2ixa_A 96 FVSSPWEWHHEHGVAA 111 (444)
T ss_dssp EECCCGGGHHHHHHHH
T ss_pred EEcCCcHHHHHHHHHH
Confidence 9999998866655543
No 247
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=97.95 E-value=9.4e-06 Score=77.67 Aligned_cols=78 Identities=14% Similarity=0.290 Sum_probs=61.7
Q ss_pred CCeEEEEccc-HHHHHHHHHHHHc-CCeE-EEEcCCCCcH-HHHHhCCCceecChhhHhh-cCCCEEEEecCchhHHHHH
Q 044593 31 SLKIAVIGFG-NFGQFLAKAFARH-HHTL-LVHSRSDHSP-AVRQQLNAPFFADLNDLCE-LHPDVVLLSTSILSTQSVL 105 (335)
Q Consensus 31 ~~kI~IIG~G-~mG~siA~~L~~~-G~~V-~~~dr~~~~~-~~a~~~g~~~~~~~~~~~~-~~aDvVIlavp~~~~~~vl 105 (335)
++||+|||+| .||..++..+.+. ++++ .++|++++.. +.+.+.|+..+.+.++++. .++|+|++|||+....+++
T Consensus 2 ~~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~ell~~~~vD~V~i~tp~~~H~~~~ 81 (387)
T 3moi_A 2 KIRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDPNEDVRERFGKEYGIPVFATLAEMMQHVQMDAVYIASPHQFHCEHV 81 (387)
T ss_dssp CEEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECSCHHHHHHHHHHHTCCEESSHHHHHHHSCCSEEEECSCGGGHHHHH
T ss_pred ceEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcCCCeECCHHHHHcCCCCCEEEEcCCcHHHHHHH
Confidence 5799999999 9999999999875 4566 4789998654 4556678888889998872 2699999999998766666
Q ss_pred hhc
Q 044593 106 KSI 108 (335)
Q Consensus 106 ~~l 108 (335)
...
T Consensus 82 ~~a 84 (387)
T 3moi_A 82 VQA 84 (387)
T ss_dssp HHH
T ss_pred HHH
Confidence 544
No 248
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=97.95 E-value=1.6e-05 Score=75.48 Aligned_cols=80 Identities=13% Similarity=0.109 Sum_probs=60.1
Q ss_pred CCCCeEEEEcccHHHH-HHHHHHHHcCCeE-EEEcCCCCcH-HHHHhCC-CceecChhhHhh-cCCCEEEEecCchhHHH
Q 044593 29 STSLKIAVIGFGNFGQ-FLAKAFARHHHTL-LVHSRSDHSP-AVRQQLN-APFFADLNDLCE-LHPDVVLLSTSILSTQS 103 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~-siA~~L~~~G~~V-~~~dr~~~~~-~~a~~~g-~~~~~~~~~~~~-~~aDvVIlavp~~~~~~ 103 (335)
|+.+||||||+|.+|. .++..+...+.+| .++|++++.. +.+.+.| ...+++.++++. .+.|+|++|||...-.+
T Consensus 24 m~~irvgiiG~G~~~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~I~tp~~~H~~ 103 (361)
T 3u3x_A 24 MDELRFAAVGLNHNHIYGQVNCLLRAGARLAGFHEKDDALAAEFSAVYADARRIATAEEILEDENIGLIVSAAVSSERAE 103 (361)
T ss_dssp --CCEEEEECCCSTTHHHHHHHHHHTTCEEEEEECSCHHHHHHHHHHSSSCCEESCHHHHHTCTTCCEEEECCCHHHHHH
T ss_pred ccCcEEEEECcCHHHHHHHHHHhhcCCcEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChHHHHH
Confidence 4568999999999994 5777777778886 5779998754 4566676 457789998872 24899999999987666
Q ss_pred HHhhc
Q 044593 104 VLKSI 108 (335)
Q Consensus 104 vl~~l 108 (335)
++...
T Consensus 104 ~~~~a 108 (361)
T 3u3x_A 104 LAIRA 108 (361)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66544
No 249
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=97.94 E-value=1.7e-05 Score=74.38 Aligned_cols=91 Identities=12% Similarity=0.019 Sum_probs=63.3
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCC--eEEEEcCCCCcHH-HHHhC----------CCceecChhhHhhcCCCEEEEec
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHHH--TLLVHSRSDHSPA-VRQQL----------NAPFFADLNDLCELHPDVVLLST 96 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G~--~V~~~dr~~~~~~-~a~~~----------g~~~~~~~~~~~~~~aDvVIlav 96 (335)
..+||+|||+|.||+++|..++..|+ +|.++|++++..+ .+.++ .+..+++.++ + ++||+||++.
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~-~-~daDiVIita 97 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV-S-AGSKLVVITA 97 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS-C-SSCSEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH-h-CCCCEEEEeC
Confidence 46899999999999999999999997 8999999876432 11111 1123456666 4 8999999986
Q ss_pred Cch----------------hHHHHHhhccccccCCccEEEEcCC
Q 044593 97 SIL----------------STQSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 97 p~~----------------~~~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
... .+.++.+++. . ..++++++.+++
T Consensus 98 G~p~kpG~tR~dll~~N~~I~k~i~~~I~-k-~~P~a~ilvvtN 139 (330)
T 3ldh_A 98 GARQQEGESRLNLVQRNVNIFKFIIPNIV-K-HSPDCLKELHPE 139 (330)
T ss_dssp SCCCCSSCCTTGGGHHHHHHHHHHHHHHH-H-HCTTCEEEECSS
T ss_pred CCCCCCCCCHHHHHHhhHHHHHHHHHHHH-h-hCCCceEEeCCC
Confidence 431 1344555553 2 367788877764
No 250
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=97.94 E-value=9.5e-06 Score=78.16 Aligned_cols=79 Identities=23% Similarity=0.297 Sum_probs=60.5
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHc---------CCeE-EEEcCCCCcH-HHHHhCCCc-eecChhhHhh-cCCCEEEEec
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARH---------HHTL-LVHSRSDHSP-AVRQQLNAP-FFADLNDLCE-LHPDVVLLST 96 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~---------G~~V-~~~dr~~~~~-~~a~~~g~~-~~~~~~~~~~-~~aDvVIlav 96 (335)
+.+||||||+|.||...+.++++. +.+| .++|++++.. +.+.+.|+. .++|.++++. .+.|+|++||
T Consensus 25 ~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~~~~~~y~d~~~ll~~~~vD~V~I~t 104 (412)
T 4gqa_A 25 ARLNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGAEKAYGDWRELVNDPQVDVVDITS 104 (412)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEEECS
T ss_pred ccceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHcCCCeEECCHHHHhcCCCCCEEEECC
Confidence 347999999999999999998874 2355 4679998754 456677874 6788888872 3689999999
Q ss_pred CchhHHHHHhhc
Q 044593 97 SILSTQSVLKSI 108 (335)
Q Consensus 97 p~~~~~~vl~~l 108 (335)
|...-.++....
T Consensus 105 p~~~H~~~~~~a 116 (412)
T 4gqa_A 105 PNHLHYTMAMAA 116 (412)
T ss_dssp CGGGHHHHHHHH
T ss_pred CcHHHHHHHHHH
Confidence 998866655543
No 251
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.92 E-value=1e-05 Score=79.55 Aligned_cols=90 Identities=17% Similarity=0.165 Sum_probs=62.9
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHc-CCeEEEEcCCCCcHHH-HHhCCCce----ec---ChhhHhhcCCCEEEEecCchh
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARH-HHTLLVHSRSDHSPAV-RQQLNAPF----FA---DLNDLCELHPDVVLLSTSILS 100 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~-G~~V~~~dr~~~~~~~-a~~~g~~~----~~---~~~~~~~~~aDvVIlavp~~~ 100 (335)
++++|+|+|+|.+|..++..|.+. |++|++++|+++..+. +...++.. .. ++.+++ .++|+||.|+|...
T Consensus 22 ~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l-~~~DvVIn~tp~~~ 100 (467)
T 2axq_A 22 MGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVL-ADNDVVISLIPYTF 100 (467)
T ss_dssp -CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHH-HTSSEEEECSCGGG
T ss_pred CCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHH-cCCCEEEECCchhh
Confidence 467899999999999999999998 7899999999765433 32224321 11 233445 68999999999875
Q ss_pred HHHHHhhccccccCCccEEEEcCC
Q 044593 101 TQSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 101 ~~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
...+... .+..+..++|++.
T Consensus 101 ~~~v~~a----~l~~g~~vvd~~~ 120 (467)
T 2axq_A 101 HPNVVKS----AIRTKTDVVTSSY 120 (467)
T ss_dssp HHHHHHH----HHHHTCEEEECSC
T ss_pred hHHHHHH----HHhcCCEEEEeec
Confidence 4444332 2446677888764
No 252
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=97.92 E-value=1.8e-05 Score=74.23 Aligned_cols=75 Identities=13% Similarity=0.180 Sum_probs=58.8
Q ss_pred CCCCCeEEEEcccHHHH-HHHHHHHHc-CCeE-EEEcCCCCcHHHHHhCCCceecChhhHhh--cCCCEEEEecCchhHH
Q 044593 28 KSTSLKIAVIGFGNFGQ-FLAKAFARH-HHTL-LVHSRSDHSPAVRQQLNAPFFADLNDLCE--LHPDVVLLSTSILSTQ 102 (335)
Q Consensus 28 ~~~~~kI~IIG~G~mG~-siA~~L~~~-G~~V-~~~dr~~~~~~~a~~~g~~~~~~~~~~~~--~~aDvVIlavp~~~~~ 102 (335)
.|+++||+|||+|.||. ..+..+.+. +.+| .++|++++. .|+..+++.++++. .+.|+|++|+|...-.
T Consensus 22 ~M~~~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~d~~~~~------~g~~~~~~~~~ll~~~~~vD~V~i~tp~~~H~ 95 (330)
T 4ew6_A 22 SMSPINLAIVGVGKIVRDQHLPSIAKNANFKLVATASRHGTV------EGVNSYTTIEAMLDAEPSIDAVSLCMPPQYRY 95 (330)
T ss_dssp CCCCEEEEEECCSHHHHHTHHHHHHHCTTEEEEEEECSSCCC------TTSEEESSHHHHHHHCTTCCEEEECSCHHHHH
T ss_pred cCCCceEEEEecCHHHHHHHHHHHHhCCCeEEEEEEeCChhh------cCCCccCCHHHHHhCCCCCCEEEEeCCcHHHH
Confidence 45678999999999998 788888875 5676 567988653 47777888888872 2599999999988866
Q ss_pred HHHhhc
Q 044593 103 SVLKSI 108 (335)
Q Consensus 103 ~vl~~l 108 (335)
++....
T Consensus 96 ~~~~~a 101 (330)
T 4ew6_A 96 EAAYKA 101 (330)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666554
No 253
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=97.92 E-value=2.8e-05 Score=72.48 Aligned_cols=79 Identities=14% Similarity=0.119 Sum_probs=59.9
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHHcCCeE-EEEcCCCCcHHHHHhC-CCceecChhhHh----------hcCCCEEEEec
Q 044593 30 TSLKIAVIGF-GNFGQFLAKAFARHHHTL-LVHSRSDHSPAVRQQL-NAPFFADLNDLC----------ELHPDVVLLST 96 (335)
Q Consensus 30 ~~~kI~IIG~-G~mG~siA~~L~~~G~~V-~~~dr~~~~~~~a~~~-g~~~~~~~~~~~----------~~~aDvVIlav 96 (335)
.++||||||+ |.||...+.++.+.+.++ .++|++++....+... +...+++.++++ ..+.|+|++||
T Consensus 2 ~mirvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~~vD~V~I~t 81 (318)
T 3oa2_A 2 HMKNFALIGAAGYIAPRHMRAIKDTGNCLVSAYDINDSVGIIDSISPQSEFFTEFEFFLDHASNLKRDSATALDYVSICS 81 (318)
T ss_dssp -CCEEEEETTTSSSHHHHHHHHHHTTCEEEEEECSSCCCGGGGGTCTTCEEESSHHHHHHHHHHHTTSTTTSCCEEEECS
T ss_pred CceEEEEECCCcHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHHhhCCCCcEECCHHHHHHhhhhhhhccCCCCcEEEECC
Confidence 3689999999 789999999999988875 5779998764433333 445677777764 25799999999
Q ss_pred CchhHHHHHhhc
Q 044593 97 SILSTQSVLKSI 108 (335)
Q Consensus 97 p~~~~~~vl~~l 108 (335)
|+..-.++....
T Consensus 82 P~~~H~~~~~~a 93 (318)
T 3oa2_A 82 PNYLHYPHIAAG 93 (318)
T ss_dssp CGGGHHHHHHHH
T ss_pred CcHHHHHHHHHH
Confidence 998876666554
No 254
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=97.91 E-value=2.1e-05 Score=73.34 Aligned_cols=93 Identities=23% Similarity=0.226 Sum_probs=65.3
Q ss_pred CCCeEEEEcccHHHHHHHHHHHH--cCCeE-EEEcCCCCc--HHHHHhCCCce-ecChhhHhh----cCCCEEEEecCch
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFAR--HHHTL-LVHSRSDHS--PAVRQQLNAPF-FADLNDLCE----LHPDVVLLSTSIL 99 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~--~G~~V-~~~dr~~~~--~~~a~~~g~~~-~~~~~~~~~----~~aDvVIlavp~~ 99 (335)
+.+||+|||+|.||..++..+.+ .+.++ .++|++++. .+.+.+.|+.. ..+.++++. .++|+||+|||..
T Consensus 3 ~~irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~~~~~~~e~ll~~~~~~~iDvV~~atp~~ 82 (312)
T 1nvm_B 3 QKLKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTYAGVEGLIKLPEFADIDFVFDATSAS 82 (312)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEESSHHHHHHHSGGGGGEEEEEECSCHH
T ss_pred CCCEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCCcccCCHHHHHhccCCCCCcEEEECCChH
Confidence 45799999999999999999965 34554 567999876 46677788763 344555541 3589999999977
Q ss_pred hHHHHHhhccccccCCccEEEEcCC
Q 044593 100 STQSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 100 ~~~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
...+....... .++|..|++...
T Consensus 83 ~h~~~a~~al~--a~~Gk~Vi~ekp 105 (312)
T 1nvm_B 83 AHVQNEALLRQ--AKPGIRLIDLTP 105 (312)
T ss_dssp HHHHHHHHHHH--HCTTCEEEECST
T ss_pred HHHHHHHHHHH--hCCCCEEEEcCc
Confidence 66666555421 123778888543
No 255
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=97.90 E-value=5.8e-06 Score=75.58 Aligned_cols=92 Identities=18% Similarity=0.268 Sum_probs=64.5
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCC-eEEEEcCCCCc-HHHHHhCCCceecChhhHhhcCCCEEEEecCchhHHH----
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHHH-TLLVHSRSDHS-PAVRQQLNAPFFADLNDLCELHPDVVLLSTSILSTQS---- 103 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G~-~V~~~dr~~~~-~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~~~~---- 103 (335)
..+++.|||+|.+|.+++.+|.+.|. +|++++|+.+. .+.+.+.+.....+.. . .++|+||.|||......
T Consensus 118 ~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~~~~~~~--~-~~~DivInaTp~gm~~~~~~~ 194 (271)
T 1npy_A 118 KNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYINSLE--N-QQADILVNVTSIGMKGGKEEM 194 (271)
T ss_dssp TTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEESCCT--T-CCCSEEEECSSTTCTTSTTTT
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCccchhhh--c-ccCCEEEECCCCCccCccccC
Confidence 35689999999999999999999997 89999999754 3445554543322222 3 67999999999775321
Q ss_pred HHhhccccccCCccEEEEcCCC
Q 044593 104 VLKSIPFQRLKRSTLFVDVLSV 125 (335)
Q Consensus 104 vl~~l~~~~l~~~~iVvd~~Sv 125 (335)
.. .+....++++.+|+|+...
T Consensus 195 ~~-~~~~~~l~~~~~v~DlvY~ 215 (271)
T 1npy_A 195 DL-AFPKAFIDNASVAFDVVAM 215 (271)
T ss_dssp SC-SSCHHHHHHCSEEEECCCS
T ss_pred CC-CCCHHHcCCCCEEEEeecC
Confidence 11 1211235578899999753
No 256
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=97.89 E-value=3.6e-05 Score=71.53 Aligned_cols=79 Identities=14% Similarity=0.123 Sum_probs=59.9
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHHcCCeE-EEEcCCCCcHHHHHhC-CCceecChhhHh---------hcCCCEEEEecC
Q 044593 30 TSLKIAVIGF-GNFGQFLAKAFARHHHTL-LVHSRSDHSPAVRQQL-NAPFFADLNDLC---------ELHPDVVLLSTS 97 (335)
Q Consensus 30 ~~~kI~IIG~-G~mG~siA~~L~~~G~~V-~~~dr~~~~~~~a~~~-g~~~~~~~~~~~---------~~~aDvVIlavp 97 (335)
.++||+|||+ |.||...+.++.+.+.++ .++|++++....+... +...+++.++++ ..+.|+|++|||
T Consensus 2 ~mirvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~vD~V~I~tP 81 (312)
T 3o9z_A 2 HMTRFALTGLAGYIAPRHLKAIKEVGGVLVASLDPATNVGLVDSFFPEAEFFTEPEAFEAYLEDLRDRGEGVDYLSIASP 81 (312)
T ss_dssp -CCEEEEECTTSSSHHHHHHHHHHTTCEEEEEECSSCCCGGGGGTCTTCEEESCHHHHHHHHHHHHHTTCCCSEEEECSC
T ss_pred CceEEEEECCChHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHHhhCCCCceeCCHHHHHHHhhhhcccCCCCcEEEECCC
Confidence 3689999999 789999999999988875 5779998764433333 445677777764 257999999999
Q ss_pred chhHHHHHhhc
Q 044593 98 ILSTQSVLKSI 108 (335)
Q Consensus 98 ~~~~~~vl~~l 108 (335)
...-.++....
T Consensus 82 ~~~H~~~~~~a 92 (312)
T 3o9z_A 82 NHLHYPQIRMA 92 (312)
T ss_dssp GGGHHHHHHHH
T ss_pred chhhHHHHHHH
Confidence 99876666554
No 257
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=97.88 E-value=3.5e-05 Score=71.75 Aligned_cols=90 Identities=12% Similarity=0.146 Sum_probs=59.5
Q ss_pred CeEEEEcccHHHHHHHHHHHHcC--CeEEEEcCCCCcHH-HHHhC--------CCceecChhhHhhcCCCEEEEecCchh
Q 044593 32 LKIAVIGFGNFGQFLAKAFARHH--HTLLVHSRSDHSPA-VRQQL--------NAPFFADLNDLCELHPDVVLLSTSILS 100 (335)
Q Consensus 32 ~kI~IIG~G~mG~siA~~L~~~G--~~V~~~dr~~~~~~-~a~~~--------g~~~~~~~~~~~~~~aDvVIlavp~~~ 100 (335)
|||+|||+|.+|.+++..|...+ .+|.++|++++..+ .+.++ .+....+..+.+ ++||+||++.+...
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~~~~~a~-~~aD~Vii~ag~~~ 79 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWAGSYGDL-EGARAVVLAAGVAQ 79 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEECCGGGG-TTEEEEEECCCCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEECCHHHh-CCCCEEEECCCCCC
Confidence 69999999999999999999887 48999999975443 12221 112222234445 89999999875432
Q ss_pred ----------------HHHHHhhccccccCCccEEEEcCC
Q 044593 101 ----------------TQSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 101 ----------------~~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
+.++.+.+. . ..++++|+.++.
T Consensus 80 ~~g~~r~dl~~~n~~i~~~i~~~i~-~-~~p~a~iiv~tN 117 (310)
T 2xxj_A 80 RPGETRLQLLDRNAQVFAQVVPRVL-E-AAPEAVLLVATN 117 (310)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHHHHH-H-HCTTCEEEECSS
T ss_pred CCCcCHHHHHHhhHHHHHHHHHHHH-H-HCCCcEEEEecC
Confidence 233444442 2 357777777743
No 258
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=97.88 E-value=4.7e-05 Score=74.76 Aligned_cols=90 Identities=13% Similarity=0.191 Sum_probs=69.6
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCchhH--HHHHh
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILST--QSVLK 106 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~~--~~vl~ 106 (335)
..+++++|+|+|.||..+|..|+..|.+|+++|+++.....+...|+. ..+.+++. ..+|+|+.++....+ .+.+
T Consensus 263 L~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~d-v~~lee~~-~~aDvVi~atG~~~vl~~e~l- 339 (488)
T 3ond_A 263 IAGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQ-VLTLEDVV-SEADIFVTTTGNKDIIMLDHM- 339 (488)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE-ECCGGGTT-TTCSEEEECSSCSCSBCHHHH-
T ss_pred ccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCCc-cCCHHHHH-HhcCEEEeCCCChhhhhHHHH-
Confidence 457899999999999999999999999999999998766556666754 34566766 789999998764432 2233
Q ss_pred hccccccCCccEEEEcCCC
Q 044593 107 SIPFQRLKRSTLFVDVLSV 125 (335)
Q Consensus 107 ~l~~~~l~~~~iVvd~~Sv 125 (335)
..++++.+|++++..
T Consensus 340 ----~~mk~gaiVvNaG~~ 354 (488)
T 3ond_A 340 ----KKMKNNAIVCNIGHF 354 (488)
T ss_dssp ----TTSCTTEEEEESSST
T ss_pred ----HhcCCCeEEEEcCCC
Confidence 246789999999754
No 259
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=97.86 E-value=3.3e-05 Score=62.00 Aligned_cols=104 Identities=14% Similarity=0.136 Sum_probs=75.1
Q ss_pred CCCeEEEEcc----cHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCchhHHHHH
Q 044593 30 TSLKIAVIGF----GNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILSTQSVL 105 (335)
Q Consensus 30 ~~~kI~IIG~----G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~~~~vl 105 (335)
+.++|+|||+ |.+|..+.+.|.+.||+|+-+++..+.. .|...+.++.++- . .|++++++|...+.+++
T Consensus 3 ~p~siAVVGaS~~~~~~g~~v~~~L~~~g~~V~pVnP~~~~i-----~G~~~y~sl~dlp-~-vDlavi~~p~~~v~~~v 75 (122)
T 3ff4_A 3 AMKKTLILGATPETNRYAYLAAERLKSHGHEFIPVGRKKGEV-----LGKTIINERPVIE-G-VDTVTLYINPQNQLSEY 75 (122)
T ss_dssp CCCCEEEETCCSCTTSHHHHHHHHHHHHTCCEEEESSSCSEE-----TTEECBCSCCCCT-T-CCEEEECSCHHHHGGGH
T ss_pred CCCEEEEEccCCCCCCHHHHHHHHHHHCCCeEEEECCCCCcC-----CCeeccCChHHCC-C-CCEEEEEeCHHHHHHHH
Confidence 3568999996 7799999999999999999888765444 3667777888875 6 99999999999999999
Q ss_pred hhccccccCCccEEEEcCCCCchHHHHHHhhCCCCCceEe
Q 044593 106 KSIPFQRLKRSTLFVDVLSVKEFPRNLFLKYLPQDFDILC 145 (335)
Q Consensus 106 ~~l~~~~l~~~~iVvd~~SvK~~~~~~l~~~l~~~~~~v~ 145 (335)
+++.. .....+|+..+.......+..++ .+.++++
T Consensus 76 ~e~~~--~g~k~v~~~~G~~~~e~~~~a~~---~Girvv~ 110 (122)
T 3ff4_A 76 NYILS--LKPKRVIFNPGTENEELEEILSE---NGIEPVI 110 (122)
T ss_dssp HHHHH--HCCSEEEECTTCCCHHHHHHHHH---TTCEEEE
T ss_pred HHHHh--cCCCEEEECCCCChHHHHHHHHH---cCCeEEC
Confidence 88742 33445666544333333333322 4567764
No 260
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=97.85 E-value=6.2e-05 Score=69.50 Aligned_cols=89 Identities=12% Similarity=0.148 Sum_probs=58.5
Q ss_pred CeEEEEcccHHHHHHHHHHHHcCC--eEEEEcCCCCcHH-HHHhC-------CC----ceecChhhHhhcCCCEEEEecC
Q 044593 32 LKIAVIGFGNFGQFLAKAFARHHH--TLLVHSRSDHSPA-VRQQL-------NA----PFFADLNDLCELHPDVVLLSTS 97 (335)
Q Consensus 32 ~kI~IIG~G~mG~siA~~L~~~G~--~V~~~dr~~~~~~-~a~~~-------g~----~~~~~~~~~~~~~aDvVIlavp 97 (335)
|||+|||+|.+|+++|..|..++. ++.++|.+++..+ .+.++ +. ....+.++ + ++||+||++.-
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~d~~~-~-~~aDvVvitAG 78 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSL-L-KGSEIIVVTAG 78 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEESCGGG-G-TTCSEEEECCC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCCCHHH-h-CCCCEEEEecC
Confidence 899999999999999999998875 8999999874321 22221 11 12345554 4 79999999763
Q ss_pred chh----------------HHHHHhhccccccCCccEEEEcCC
Q 044593 98 ILS----------------TQSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 98 ~~~----------------~~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
... +.++.+.+. . ..|+++|+-+++
T Consensus 79 ~prkpGmtR~dLl~~Na~I~~~i~~~i~-~-~~p~aivlvvsN 119 (294)
T 2x0j_A 79 LARKPGMTRLDLAHKNAGIIKDIAKKIV-E-NAPESKILVVTN 119 (294)
T ss_dssp CCCCSSSCHHHHHHHHHHHHHHHHHHHH-T-TSTTCEEEECSS
T ss_pred CCCCCCCchHHHHHHHHHHHHHHHHHHH-h-cCCceEEEEecC
Confidence 211 234444553 2 346677776654
No 261
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=97.85 E-value=1.4e-05 Score=75.77 Aligned_cols=81 Identities=21% Similarity=0.197 Sum_probs=60.5
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcC--------CeE-EEEcCCCCcH-HHHHhCCCc-eecChhhHhh-cCCCEEEEe
Q 044593 28 KSTSLKIAVIGFGNFGQFLAKAFARHH--------HTL-LVHSRSDHSP-AVRQQLNAP-FFADLNDLCE-LHPDVVLLS 95 (335)
Q Consensus 28 ~~~~~kI~IIG~G~mG~siA~~L~~~G--------~~V-~~~dr~~~~~-~~a~~~g~~-~~~~~~~~~~-~~aDvVIla 95 (335)
.|+..||||||+|.||...+.++.+.. .+| .++|++++.. +.+.+.|+. .++|.++++. .+.|+|++|
T Consensus 3 ~M~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a~~~a~~~g~~~~~~d~~~ll~~~~iDaV~I~ 82 (390)
T 4h3v_A 3 AMTNLGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAVRAAAGKLGWSTTETDWRTLLERDDVQLVDVC 82 (390)
T ss_dssp -CCEEEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHHHHHHHHHHTCSEEESCHHHHTTCTTCSEEEEC
T ss_pred CCCcCcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEe
Confidence 455568999999999999988887642 255 5779998754 456677874 6788888862 368999999
Q ss_pred cCchhHHHHHhhc
Q 044593 96 TSILSTQSVLKSI 108 (335)
Q Consensus 96 vp~~~~~~vl~~l 108 (335)
||...-.++....
T Consensus 83 tP~~~H~~~~~~a 95 (390)
T 4h3v_A 83 TPGDSHAEIAIAA 95 (390)
T ss_dssp SCGGGHHHHHHHH
T ss_pred CChHHHHHHHHHH
Confidence 9999866665543
No 262
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=97.84 E-value=8.5e-06 Score=71.94 Aligned_cols=79 Identities=14% Similarity=0.226 Sum_probs=51.0
Q ss_pred CCCCeEEEEcccHHHHHHHHH--HHHcCCeEE-EEcCCCCcHHH-HHhCCCceecChhhHhhcCCCEEEEecCchhHHHH
Q 044593 29 STSLKIAVIGFGNFGQFLAKA--FARHHHTLL-VHSRSDHSPAV-RQQLNAPFFADLNDLCELHPDVVLLSTSILSTQSV 104 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~--L~~~G~~V~-~~dr~~~~~~~-a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~~~~v 104 (335)
...++|+|||+|.+|..+++. +...|++++ ++|.+++.... +...++...+++.+++ ++.|++++|+|.....++
T Consensus 83 ~~~~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~dp~k~g~~i~gv~V~~~~dl~eli-~~~D~ViIAvPs~~~~ei 161 (215)
T 2vt3_A 83 DEMTDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDINESKIGTEVGGVPVYNLDDLEQHV-KDESVAILTVPAVAAQSI 161 (215)
T ss_dssp C---CEEEECCSHHHHHHHHCC------CCEEEEEESCTTTTTCEETTEEEEEGGGHHHHC-SSCCEEEECSCHHHHHHH
T ss_pred CCCCEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeCCHHHHHhHhcCCeeechhhHHHHH-HhCCEEEEecCchhHHHH
Confidence 345789999999999999994 445678765 56998875431 1112222345667776 445999999998877777
Q ss_pred Hhhc
Q 044593 105 LKSI 108 (335)
Q Consensus 105 l~~l 108 (335)
...+
T Consensus 162 ~~~l 165 (215)
T 2vt3_A 162 TDRL 165 (215)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6665
No 263
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=97.83 E-value=3.8e-05 Score=70.12 Aligned_cols=79 Identities=24% Similarity=0.314 Sum_probs=58.4
Q ss_pred CCCCeEEEEc-ccHHHHHHHHHHHHc-CCeEEE-EcCCCCcH---H---HH-HhCCCceecChhhHhhcCCCEEEEecCc
Q 044593 29 STSLKIAVIG-FGNFGQFLAKAFARH-HHTLLV-HSRSDHSP---A---VR-QQLNAPFFADLNDLCELHPDVVLLSTSI 98 (335)
Q Consensus 29 ~~~~kI~IIG-~G~mG~siA~~L~~~-G~~V~~-~dr~~~~~---~---~a-~~~g~~~~~~~~~~~~~~aDvVIlavp~ 98 (335)
|+++||+|+| +|.||..+++.+.+. ++++++ +|++.... + .+ ...|+..+.++++++ .++|+||-++++
T Consensus 5 M~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~~gv~v~~dl~~ll-~~~DVVIDfT~p 83 (272)
T 4f3y_A 5 MSSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQTGVALTDDIERVC-AEADYLIDFTLP 83 (272)
T ss_dssp -CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCCCSCBCBCCHHHHH-HHCSEEEECSCH
T ss_pred ccccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCCCCceecCCHHHHh-cCCCEEEEcCCH
Confidence 5678999999 899999999999875 567765 68875321 1 00 112566678888887 689999999998
Q ss_pred hhHHHHHhhc
Q 044593 99 LSTQSVLKSI 108 (335)
Q Consensus 99 ~~~~~vl~~l 108 (335)
....+.+...
T Consensus 84 ~a~~~~~~~a 93 (272)
T 4f3y_A 84 EGTLVHLDAA 93 (272)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8877777655
No 264
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=97.81 E-value=6.2e-05 Score=69.28 Aligned_cols=76 Identities=12% Similarity=0.188 Sum_probs=59.8
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHHcCCeEE-EEcCCCCcHHHHHhCCCceecChhhHhhc--CCCEEEEecCchhHHHHH
Q 044593 30 TSLKIAVIGF-GNFGQFLAKAFARHHHTLL-VHSRSDHSPAVRQQLNAPFFADLNDLCEL--HPDVVLLSTSILSTQSVL 105 (335)
Q Consensus 30 ~~~kI~IIG~-G~mG~siA~~L~~~G~~V~-~~dr~~~~~~~a~~~g~~~~~~~~~~~~~--~aDvVIlavp~~~~~~vl 105 (335)
+..||+|+|+ |.||..+++.+.+.|++++ .+++..... ...|+..+.+.+++. + ++|+++++||+....+++
T Consensus 6 ~~~rVaViG~sG~~G~~~~~~l~~~g~~~V~~V~p~~~g~---~~~G~~vy~sl~el~-~~~~~D~viI~tP~~~~~~~~ 81 (288)
T 2nu8_A 6 KNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGT---THLGLPVFNTVREAV-AATGATASVIYVPAPFCKDSI 81 (288)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTC---EETTEEEESSHHHHH-HHHCCCEEEECCCGGGHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCcccc---eeCCeeccCCHHHHh-hcCCCCEEEEecCHHHHHHHH
Confidence 4679999998 9999999999999899843 445432101 135777888888886 5 899999999999998888
Q ss_pred hhcc
Q 044593 106 KSIP 109 (335)
Q Consensus 106 ~~l~ 109 (335)
.+..
T Consensus 82 ~ea~ 85 (288)
T 2nu8_A 82 LEAI 85 (288)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8763
No 265
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=97.79 E-value=1.3e-05 Score=78.66 Aligned_cols=78 Identities=13% Similarity=0.206 Sum_probs=58.7
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHH-HhCCCce----ecChh---hHhhcCCCEEEEecCchhH
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVR-QQLNAPF----FADLN---DLCELHPDVVLLSTSILST 101 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a-~~~g~~~----~~~~~---~~~~~~aDvVIlavp~~~~ 101 (335)
..|||.|+|+|.+|..+|+.|.+.||+|+++|+|++..+.+ .++++.. .++++ ++-.++||++|.+|+.+..
T Consensus 2 ~~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t~~De~ 81 (461)
T 4g65_A 2 NAMKIIILGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAVTNTDET 81 (461)
T ss_dssp CCEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEECCSCHHH
T ss_pred CcCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEEcCChHH
Confidence 57899999999999999999999999999999999877644 4556532 22322 2212689999999998875
Q ss_pred HHHHhh
Q 044593 102 QSVLKS 107 (335)
Q Consensus 102 ~~vl~~ 107 (335)
.-+...
T Consensus 82 Nl~~~~ 87 (461)
T 4g65_A 82 NMAACQ 87 (461)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444333
No 266
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=97.79 E-value=1.8e-05 Score=73.74 Aligned_cols=92 Identities=17% Similarity=0.188 Sum_probs=65.5
Q ss_pred CCCCCeEEEEcccHH-HHHHHHHHHHcCCeEEEEcCCCCc-HHHHHhCCC--c-e-----e--cChhhHhhcCCCEEEEe
Q 044593 28 KSTSLKIAVIGFGNF-GQFLAKAFARHHHTLLVHSRSDHS-PAVRQQLNA--P-F-----F--ADLNDLCELHPDVVLLS 95 (335)
Q Consensus 28 ~~~~~kI~IIG~G~m-G~siA~~L~~~G~~V~~~dr~~~~-~~~a~~~g~--~-~-----~--~~~~~~~~~~aDvVIla 95 (335)
...+.++.|||.|.| |..+|..|...|..|+++||+... ...+...+. . . + .++.+.+ .++|+||.|
T Consensus 174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l-~~ADIVIsA 252 (320)
T 1edz_A 174 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCS-LDSDVVITG 252 (320)
T ss_dssp TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHH-HHCSEEEEC
T ss_pred CCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHh-ccCCEEEEC
Confidence 346789999999975 999999999999999999998432 122222221 1 1 1 4566667 789999999
Q ss_pred cCchhHHHHHhhccccccCCccEEEEcCCC
Q 044593 96 TSILSTQSVLKSIPFQRLKRSTLFVDVLSV 125 (335)
Q Consensus 96 vp~~~~~~vl~~l~~~~l~~~~iVvd~~Sv 125 (335)
|+.... + +....+++|++|+|+++-
T Consensus 253 tg~p~~--v---I~~e~vk~GavVIDVgi~ 277 (320)
T 1edz_A 253 VPSENY--K---FPTEYIKEGAVCINFACT 277 (320)
T ss_dssp CCCTTC--C---BCTTTSCTTEEEEECSSS
T ss_pred CCCCcc--e---eCHHHcCCCeEEEEcCCC
Confidence 986431 1 222457899999999864
No 267
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=97.79 E-value=1.6e-05 Score=75.94 Aligned_cols=70 Identities=13% Similarity=0.334 Sum_probs=56.2
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHc--CCeEE-EEcCCCCc-HHHHHhCCCceecChhhHhhcCCCEEEEecCchhH
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARH--HHTLL-VHSRSDHS-PAVRQQLNAPFFADLNDLCELHPDVVLLSTSILST 101 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~--G~~V~-~~dr~~~~-~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~~ 101 (335)
...||+|||+| +|...+.++++. +++++ ++|++++. .+.+.+.|+..++|.++++ ++.|++++|||....
T Consensus 6 ~~~rv~VvG~G-~g~~h~~a~~~~~~~~elvav~~~~~~~a~~~a~~~gv~~~~~~~~l~-~~~D~v~i~~p~~~h 79 (372)
T 4gmf_A 6 PKQRVLIVGAK-FGEMYLNAFMQPPEGLELVGLLAQGSARSRELAHAFGIPLYTSPEQIT-GMPDIACIVVRSTVA 79 (372)
T ss_dssp -CEEEEEECST-TTHHHHHTTSSCCTTEEEEEEECCSSHHHHHHHHHTTCCEESSGGGCC-SCCSEEEECCC--CT
T ss_pred CCCEEEEEehH-HHHHHHHHHHhCCCCeEEEEEECCCHHHHHHHHHHhCCCEECCHHHHh-cCCCEEEEECCCccc
Confidence 46799999999 899888888775 56765 67999865 4678889999889999998 799999999998653
No 268
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=97.78 E-value=1.6e-05 Score=73.04 Aligned_cols=116 Identities=10% Similarity=0.094 Sum_probs=72.7
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCC-eEEEEcCCCCcHH-HHHhCCCceecChhhHhhcCCCEEEEecCchhHHHHH-
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHH-TLLVHSRSDHSPA-VRQQLNAPFFADLNDLCELHPDVVLLSTSILSTQSVL- 105 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~-~V~~~dr~~~~~~-~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~~~~vl- 105 (335)
...+++.|+|+|.+|.+++..|.+.|. +|++++|+.+..+ .+.+.+.....++.+ + ++|+||.|||.......-
T Consensus 120 ~~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~~~~~~~~l~~-l--~~DivInaTp~Gm~~~~~~ 196 (282)
T 3fbt_A 120 IKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEFKVISYDELSN-L--KGDVIINCTPKGMYPKEGE 196 (282)
T ss_dssp CTTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTSEEEEHHHHTT-C--CCSEEEECSSTTSTTSTTC
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhcCcccHHHHHh-c--cCCEEEECCccCccCCCcc
Confidence 356799999999999999999999998 8999999976543 222221111112222 1 699999999976422100
Q ss_pred hhccccccCCccEEEEcCCC--CchHHHHHHhhCCCCCceEeccccC
Q 044593 106 KSIPFQRLKRSTLFVDVLSV--KEFPRNLFLKYLPQDFDILCTHPMF 150 (335)
Q Consensus 106 ~~l~~~~l~~~~iVvd~~Sv--K~~~~~~l~~~l~~~~~~v~~HPma 150 (335)
..+....++++.+|+|+.-. .+..++..++ .+...+.+-.|.
T Consensus 197 ~pi~~~~l~~~~~v~DlvY~P~~T~ll~~A~~---~G~~~~~Gl~ML 240 (282)
T 3fbt_A 197 SPVDKEVVAKFSSAVDLIYNPVETLFLKYARE---SGVKAVNGLYML 240 (282)
T ss_dssp CSSCHHHHTTCSEEEESCCSSSSCHHHHHHHH---TTCEEECSHHHH
T ss_pred CCCCHHHcCCCCEEEEEeeCCCCCHHHHHHHH---CcCeEeCcHHHH
Confidence 00222346788999998633 2344444443 244555554444
No 269
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=97.78 E-value=6.4e-05 Score=68.40 Aligned_cols=76 Identities=11% Similarity=0.161 Sum_probs=61.2
Q ss_pred CCCCeEEEEcccH-HHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCchhHHHHHhh
Q 044593 29 STSLKIAVIGFGN-FGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILSTQSVLKS 107 (335)
Q Consensus 29 ~~~~kI~IIG~G~-mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~~~~vl~~ 107 (335)
..++++.|||.|. +|..+|..|.+.|..|+++++.. .++.+.+ .++|+||.+++... +
T Consensus 148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t--------------~~L~~~~-~~ADIVI~Avg~p~---~--- 206 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKT--------------KDIGSMT-RSSKIVVVAVGRPG---F--- 206 (276)
T ss_dssp CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC--------------SCHHHHH-HHSSEEEECSSCTT---C---
T ss_pred cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCc--------------ccHHHhh-ccCCEEEECCCCCc---c---
Confidence 5789999999875 89999999999999999998753 3455666 78999999998643 2
Q ss_pred ccccccCCccEEEEcCCC
Q 044593 108 IPFQRLKRSTLFVDVLSV 125 (335)
Q Consensus 108 l~~~~l~~~~iVvd~~Sv 125 (335)
+....+++|++|+|++..
T Consensus 207 I~~~~vk~GavVIDvgi~ 224 (276)
T 3ngx_A 207 LNREMVTPGSVVIDVGIN 224 (276)
T ss_dssp BCGGGCCTTCEEEECCCE
T ss_pred ccHhhccCCcEEEEeccC
Confidence 223468999999999864
No 270
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=97.76 E-value=7.7e-05 Score=68.71 Aligned_cols=78 Identities=17% Similarity=0.216 Sum_probs=60.4
Q ss_pred CCCCeEEEEcccH-HHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCchhHHHHHhh
Q 044593 29 STSLKIAVIGFGN-FGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILSTQSVLKS 107 (335)
Q Consensus 29 ~~~~kI~IIG~G~-mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~~~~vl~~ 107 (335)
..++++.|||.|. +|..+|..|.+.|..|+++++.....+ +.+.+ .+||+||.+++... +
T Consensus 163 l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~~l~------------l~~~~-~~ADIVI~Avg~p~---~--- 223 (300)
T 4a26_A 163 MAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTSTED------------MIDYL-RTADIVIAAMGQPG---Y--- 223 (300)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSCHHH------------HHHHH-HTCSEEEECSCCTT---C---
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCCCch------------hhhhh-ccCCEEEECCCCCC---C---
Confidence 4678999999876 799999999999999999987543221 11556 79999999999643 1
Q ss_pred ccccccCCccEEEEcCCC
Q 044593 108 IPFQRLKRSTLFVDVLSV 125 (335)
Q Consensus 108 l~~~~l~~~~iVvd~~Sv 125 (335)
+....+++|++|+|++..
T Consensus 224 I~~~~vk~GavVIDvgi~ 241 (300)
T 4a26_A 224 VKGEWIKEGAAVVDVGTT 241 (300)
T ss_dssp BCGGGSCTTCEEEECCCE
T ss_pred CcHHhcCCCcEEEEEecc
Confidence 223468999999999853
No 271
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=97.75 E-value=5.5e-05 Score=70.82 Aligned_cols=66 Identities=20% Similarity=0.312 Sum_probs=47.8
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHHcC--CeEEEEcCCCCcHHHH---HhCCC----ce---ecChhhHhhcCCCEEEEec
Q 044593 30 TSLKIAVIG-FGNFGQFLAKAFARHH--HTLLVHSRSDHSPAVR---QQLNA----PF---FADLNDLCELHPDVVLLST 96 (335)
Q Consensus 30 ~~~kI~IIG-~G~mG~siA~~L~~~G--~~V~~~dr~~~~~~~a---~~~g~----~~---~~~~~~~~~~~aDvVIlav 96 (335)
+.|||+||| .|.+|.+++..|...| ++|+++|++++ ...+ ..... .. +++..+++ +++|+||++.
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~-~~~~~dL~~~~~~~~v~~~~~t~d~~~al-~gaDvVi~~a 84 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA-PGVTADISHMDTGAVVRGFLGQQQLEAAL-TGMDLIIVPA 84 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH-HHHHHHHHTSCSSCEEEEEESHHHHHHHH-TTCSEEEECC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc-HhHHHHhhcccccceEEEEeCCCCHHHHc-CCCCEEEEcC
Confidence 468999999 7999999999999988 78999998875 2112 11111 11 22445656 8999999987
Q ss_pred C
Q 044593 97 S 97 (335)
Q Consensus 97 p 97 (335)
+
T Consensus 85 g 85 (326)
T 1smk_A 85 G 85 (326)
T ss_dssp C
T ss_pred C
Confidence 5
No 272
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=97.74 E-value=3.8e-05 Score=73.12 Aligned_cols=80 Identities=16% Similarity=0.232 Sum_probs=60.6
Q ss_pred CCCCeEEEEc-ccHHHHH-HH----HHHHHcCC-eE----------EEEcCCCCcH-HHHHhCCCc-eecChhhHhh-cC
Q 044593 29 STSLKIAVIG-FGNFGQF-LA----KAFARHHH-TL----------LVHSRSDHSP-AVRQQLNAP-FFADLNDLCE-LH 88 (335)
Q Consensus 29 ~~~~kI~IIG-~G~mG~s-iA----~~L~~~G~-~V----------~~~dr~~~~~-~~a~~~g~~-~~~~~~~~~~-~~ 88 (335)
++.+||+||| +|.||.. .+ ..+.+.+. .+ .++|++++.. +.+.+.|+. .++|.++++. .+
T Consensus 4 ~~~irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~ 83 (383)
T 3oqb_A 4 TQRLGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGRSAEKVEALAKRFNIARWTTDLDAALADKN 83 (383)
T ss_dssp CEEEEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECSSSHHHHHHHHHTTCCCEESCHHHHHHCSS
T ss_pred CceeEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcCCHHHHHHHHHHhCCCcccCCHHHHhcCCC
Confidence 4567999999 9999998 77 77777652 22 4899998764 556778884 6789998872 34
Q ss_pred CCEEEEecCchhHHHHHhhc
Q 044593 89 PDVVLLSTSILSTQSVLKSI 108 (335)
Q Consensus 89 aDvVIlavp~~~~~~vl~~l 108 (335)
.|+|++|+|.....++....
T Consensus 84 iD~V~i~tp~~~h~~~~~~a 103 (383)
T 3oqb_A 84 DTMFFDAATTQARPGLLTQA 103 (383)
T ss_dssp CCEEEECSCSSSSHHHHHHH
T ss_pred CCEEEECCCchHHHHHHHHH
Confidence 89999999988766655543
No 273
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=97.73 E-value=0.00011 Score=69.36 Aligned_cols=89 Identities=18% Similarity=0.173 Sum_probs=60.6
Q ss_pred CeEEEEcccHHHHHHHHHHHHcC-CeE-EEEcCCCCcH-HHHHhCCCceec-----------------ChhhHhhcCCCE
Q 044593 32 LKIAVIGFGNFGQFLAKAFARHH-HTL-LVHSRSDHSP-AVRQQLNAPFFA-----------------DLNDLCELHPDV 91 (335)
Q Consensus 32 ~kI~IIG~G~mG~siA~~L~~~G-~~V-~~~dr~~~~~-~~a~~~g~~~~~-----------------~~~~~~~~~aDv 91 (335)
.||||+|+|.||..+++.|.+.. .+| .+.|+++... ..+...|+..+. +.+++. .++|+
T Consensus 2 ikVgIiGaG~iG~~~~r~L~~~p~~elvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~~~~v~v~~~~e~l~-~~vDv 80 (340)
T 1b7g_O 2 VNVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLI-KTSDI 80 (340)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHH-HHCSE
T ss_pred eEEEEEecCHHHHHHHHHHHcCCCCEEEEEEcCChHHHHHHHHhcCcceecCcCHHHHhcccccccccCHhHhh-cCCCE
Confidence 58999999999999999998754 466 4568876543 344555554332 222333 47999
Q ss_pred EEEecCchhHHHHHhhccccccCCccEEEEcCCC
Q 044593 92 VLLSTSILSTQSVLKSIPFQRLKRSTLFVDVLSV 125 (335)
Q Consensus 92 VIlavp~~~~~~vl~~l~~~~l~~~~iVvd~~Sv 125 (335)
||.|+|.....+..... ++.|..++|.++-
T Consensus 81 V~~aTp~~~s~~~a~~~----~~aG~kvV~~sa~ 110 (340)
T 1b7g_O 81 VVDTTPNGVGAQYKPIY----LQLQRNAIFQGGE 110 (340)
T ss_dssp EEECCSTTHHHHHHHHH----HHTTCEEEECTTS
T ss_pred EEECCCCchhHHHHHHH----HHcCCeEEEeCCC
Confidence 99999998776666543 3356666776554
No 274
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=97.73 E-value=5.1e-05 Score=70.76 Aligned_cols=106 Identities=11% Similarity=0.082 Sum_probs=67.6
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCC-eEEEEcCCCC---cHH-HHHh----CCCc--e--ecC---hhhHhhcCCCEE
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHH-TLLVHSRSDH---SPA-VRQQ----LNAP--F--FAD---LNDLCELHPDVV 92 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~-~V~~~dr~~~---~~~-~a~~----~g~~--~--~~~---~~~~~~~~aDvV 92 (335)
...+++.|+|+|.+|.+++..|.+.|. +|++++|+++ ..+ .+.+ .+.. . ..+ +.+.+ .++|+|
T Consensus 152 l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l-~~aDiI 230 (315)
T 3tnl_A 152 IIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEI-AESVIF 230 (315)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHH-HTCSEE
T ss_pred ccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhh-cCCCEE
Confidence 357899999999999999999999998 8999999943 222 2222 2221 1 122 23344 689999
Q ss_pred EEecCchhHHHH-Hhhc-cccccCCccEEEEcCCCC--chHHHHHHh
Q 044593 93 LLSTSILSTQSV-LKSI-PFQRLKRSTLFVDVLSVK--EFPRNLFLK 135 (335)
Q Consensus 93 Ilavp~~~~~~v-l~~l-~~~~l~~~~iVvd~~SvK--~~~~~~l~~ 135 (335)
|-|||....... ...+ ....++++.+|+|+.-.. +..++..++
T Consensus 231 INaTp~Gm~~~~~~~p~~~~~~l~~~~~V~DlvY~P~~T~ll~~A~~ 277 (315)
T 3tnl_A 231 TNATGVGMKPFEGETLLPSADMLRPELIVSDVVYKPTKTRLLEIAEE 277 (315)
T ss_dssp EECSSTTSTTSTTCCSCCCGGGCCTTCEEEESCCSSSSCHHHHHHHH
T ss_pred EECccCCCCCCCCCCCCCcHHHcCCCCEEEEeccCCCCCHHHHHHHH
Confidence 999997643210 0011 123477889999986432 344444443
No 275
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=97.72 E-value=0.00012 Score=68.84 Aligned_cols=75 Identities=20% Similarity=0.213 Sum_probs=54.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHHcC-CeE-EEEcCCCCcH-HHHHhCCC------------------ceecChhhHhhcCC
Q 044593 31 SLKIAVIGFGNFGQFLAKAFARHH-HTL-LVHSRSDHSP-AVRQQLNA------------------PFFADLNDLCELHP 89 (335)
Q Consensus 31 ~~kI~IIG~G~mG~siA~~L~~~G-~~V-~~~dr~~~~~-~~a~~~g~------------------~~~~~~~~~~~~~a 89 (335)
++||||+|+|.||..+++.|.+.. .+| .+.|++++.. ..+...|+ ....+.+++. .++
T Consensus 2 ~irVgIiG~G~iG~~~~r~l~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~v~~d~~~l~-~~v 80 (334)
T 2czc_A 2 KVKVGVNGYGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLL-EKV 80 (334)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHH-TTC
T ss_pred CcEEEEEeEhHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHHHHHhcCccccccccccceeccCCceEEcCcHHHhc-cCC
Confidence 369999999999999999998764 566 4568876654 33444443 2334667776 689
Q ss_pred CEEEEecCchhHHHHHh
Q 044593 90 DVVLLSTSILSTQSVLK 106 (335)
Q Consensus 90 DvVIlavp~~~~~~vl~ 106 (335)
|+|++|+|.....+...
T Consensus 81 DvV~~aTp~~~h~~~a~ 97 (334)
T 2czc_A 81 DIIVDATPGGIGAKNKP 97 (334)
T ss_dssp SEEEECCSTTHHHHHHH
T ss_pred CEEEECCCccccHHHHH
Confidence 99999999886444443
No 276
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=97.71 E-value=8.7e-05 Score=69.65 Aligned_cols=92 Identities=13% Similarity=0.118 Sum_probs=62.0
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCC--eEEEEcCCCCcHH-HHHhC--C--------CceecChhhHhhcCCCEEEEe
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHH--TLLVHSRSDHSPA-VRQQL--N--------APFFADLNDLCELHPDVVLLS 95 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~--~V~~~dr~~~~~~-~a~~~--g--------~~~~~~~~~~~~~~aDvVIla 95 (335)
...+||+|||+|.||.++|..|...|+ +|.++|++++..+ .+.++ . +....+.++ + ++||+||++
T Consensus 17 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~d~~~-~-~~aDiVvi~ 94 (331)
T 4aj2_A 17 VPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSKDYSV-T-ANSKLVIIT 94 (331)
T ss_dssp CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECSSGGG-G-TTEEEEEEC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcCCHHH-h-CCCCEEEEc
Confidence 467899999999999999999999887 8999999875432 12111 1 112345554 4 799999998
Q ss_pred cCch----------------hHHHHHhhccccccCCccEEEEcCC
Q 044593 96 TSIL----------------STQSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 96 vp~~----------------~~~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
.... .+.++.+.+. . ..|+.+++.+++
T Consensus 95 aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~-~-~~p~a~vlvvtN 137 (331)
T 4aj2_A 95 AGARQQEGESRLNLVQRNVNIFKFIIPNVV-K-YSPQCKLLIVSN 137 (331)
T ss_dssp CSCCCCTTCCGGGGHHHHHHHHHHHHHHHH-H-HCTTCEEEECSS
T ss_pred cCCCCCCCccHHHHHHHHHHHHHHHHHHHH-H-HCCCeEEEEecC
Confidence 6321 1234444443 2 367778777764
No 277
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=97.71 E-value=0.00013 Score=66.72 Aligned_cols=76 Identities=17% Similarity=0.238 Sum_probs=60.6
Q ss_pred CCCCeEEEEcccH-HHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCchhHHHHHhh
Q 044593 29 STSLKIAVIGFGN-FGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILSTQSVLKS 107 (335)
Q Consensus 29 ~~~~kI~IIG~G~-mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~~~~vl~~ 107 (335)
..++++.|||.|. +|..+|..|...|..|+++.+.. .++.+.+ .++|+||.+++....
T Consensus 159 l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t--------------~~L~~~~-~~ADIVI~Avg~p~~------ 217 (285)
T 3l07_A 159 TEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFT--------------TDLKSHT-TKADILIVAVGKPNF------ 217 (285)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC--------------SSHHHHH-TTCSEEEECCCCTTC------
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc--------------hhHHHhc-ccCCEEEECCCCCCC------
Confidence 4678999999877 79999999999999999997653 2455666 899999999985432
Q ss_pred ccccccCCccEEEEcCCC
Q 044593 108 IPFQRLKRSTLFVDVLSV 125 (335)
Q Consensus 108 l~~~~l~~~~iVvd~~Sv 125 (335)
+....+++|++|+|++.-
T Consensus 218 I~~~~vk~GavVIDvgi~ 235 (285)
T 3l07_A 218 ITADMVKEGAVVIDVGIN 235 (285)
T ss_dssp BCGGGSCTTCEEEECCCE
T ss_pred CCHHHcCCCcEEEEeccc
Confidence 223468999999999854
No 278
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=97.71 E-value=9.9e-05 Score=67.57 Aligned_cols=76 Identities=21% Similarity=0.250 Sum_probs=61.1
Q ss_pred CCCCeEEEEcccH-HHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCchhHHHHHhh
Q 044593 29 STSLKIAVIGFGN-FGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILSTQSVLKS 107 (335)
Q Consensus 29 ~~~~kI~IIG~G~-mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~~~~vl~~ 107 (335)
..+.++.|||.|. +|..+|..|...|..|+++++.. .++.+.+ .++|+||.+++....
T Consensus 157 l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t--------------~~L~~~~-~~ADIVI~Avg~p~l------ 215 (288)
T 1b0a_A 157 TFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT--------------KNLRHHV-ENADLLIVAVGKPGF------ 215 (288)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC--------------SCHHHHH-HHCSEEEECSCCTTC------
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCc--------------hhHHHHh-ccCCEEEECCCCcCc------
Confidence 4678999999996 69999999999999999998654 2445566 789999999996542
Q ss_pred ccccccCCccEEEEcCCC
Q 044593 108 IPFQRLKRSTLFVDVLSV 125 (335)
Q Consensus 108 l~~~~l~~~~iVvd~~Sv 125 (335)
+....+++|++|+|++.-
T Consensus 216 I~~~~vk~GavVIDVgi~ 233 (288)
T 1b0a_A 216 IPGDWIKEGAIVIDVGIN 233 (288)
T ss_dssp BCTTTSCTTCEEEECCCE
T ss_pred CCHHHcCCCcEEEEccCC
Confidence 223457899999999854
No 279
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=97.70 E-value=0.00015 Score=66.75 Aligned_cols=76 Identities=13% Similarity=0.167 Sum_probs=61.4
Q ss_pred CCCCeEEEEcccH-HHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCchhHHHHHhh
Q 044593 29 STSLKIAVIGFGN-FGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILSTQSVLKS 107 (335)
Q Consensus 29 ~~~~kI~IIG~G~-mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~~~~vl~~ 107 (335)
..+.++.|||.|. +|..+|..|...|..|+++++.. .++.+.+ .+||+||.|++....
T Consensus 163 l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t--------------~~L~~~~-~~ADIVI~Avg~p~~------ 221 (301)
T 1a4i_A 163 IAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKT--------------AHLDEEV-NKGDILVVATGQPEM------ 221 (301)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC--------------SSHHHHH-TTCSEEEECCCCTTC------
T ss_pred CCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCc--------------ccHHHHh-ccCCEEEECCCCccc------
Confidence 4578999999996 79999999999999999998653 3455666 899999999997542
Q ss_pred ccccccCCccEEEEcCCC
Q 044593 108 IPFQRLKRSTLFVDVLSV 125 (335)
Q Consensus 108 l~~~~l~~~~iVvd~~Sv 125 (335)
+....+++|++|+|++.-
T Consensus 222 I~~~~vk~GavVIDVgi~ 239 (301)
T 1a4i_A 222 VKGEWIKPGAIVIDCGIN 239 (301)
T ss_dssp BCGGGSCTTCEEEECCCB
T ss_pred CCHHHcCCCcEEEEccCC
Confidence 323457899999999863
No 280
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=97.70 E-value=0.00015 Score=66.33 Aligned_cols=76 Identities=18% Similarity=0.230 Sum_probs=61.0
Q ss_pred CCCCeEEEEcccH-HHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCchhHHHHHhh
Q 044593 29 STSLKIAVIGFGN-FGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILSTQSVLKS 107 (335)
Q Consensus 29 ~~~~kI~IIG~G~-mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~~~~vl~~ 107 (335)
..++++.|||.|. +|..+|..|...|..|+++++... ++.+.+ .++|+||.+++....
T Consensus 158 l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~--------------~L~~~~-~~ADIVI~Avg~p~~------ 216 (285)
T 3p2o_A 158 LEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTK--------------DLSLYT-RQADLIIVAAGCVNL------ 216 (285)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS--------------CHHHHH-TTCSEEEECSSCTTC------
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCch--------------hHHHHh-hcCCEEEECCCCCCc------
Confidence 4678999999877 699999999999999999987542 445666 899999999985432
Q ss_pred ccccccCCccEEEEcCCC
Q 044593 108 IPFQRLKRSTLFVDVLSV 125 (335)
Q Consensus 108 l~~~~l~~~~iVvd~~Sv 125 (335)
+....+++|++|+|++.-
T Consensus 217 I~~~~vk~GavVIDVgi~ 234 (285)
T 3p2o_A 217 LRSDMVKEGVIVVDVGIN 234 (285)
T ss_dssp BCGGGSCTTEEEEECCCE
T ss_pred CCHHHcCCCeEEEEeccC
Confidence 223568999999999854
No 281
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=97.70 E-value=7.3e-05 Score=69.61 Aligned_cols=117 Identities=11% Similarity=0.073 Sum_probs=72.2
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCC-eEEEEcCCCCc---HH-HHHh----CCCc--e--ecCh---hhHhhcCCCEE
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHH-TLLVHSRSDHS---PA-VRQQ----LNAP--F--FADL---NDLCELHPDVV 92 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~-~V~~~dr~~~~---~~-~a~~----~g~~--~--~~~~---~~~~~~~aDvV 92 (335)
...+++.|+|+|.+|.+++..|.+.|. +|++++|+++. .+ .+.+ .+.. . ..+. .+.+ .++|+|
T Consensus 146 l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l-~~~DiI 224 (312)
T 3t4e_A 146 MRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEAL-ASADIL 224 (312)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHH-HHCSEE
T ss_pred cCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhc-cCceEE
Confidence 356899999999999999999999998 89999999443 22 2221 2221 1 1232 3334 679999
Q ss_pred EEecCchhHHHHHhhc--cccccCCccEEEEcCCC--CchHHHHHHhhCCCCCceEecccc
Q 044593 93 LLSTSILSTQSVLKSI--PFQRLKRSTLFVDVLSV--KEFPRNLFLKYLPQDFDILCTHPM 149 (335)
Q Consensus 93 Ilavp~~~~~~vl~~l--~~~~l~~~~iVvd~~Sv--K~~~~~~l~~~l~~~~~~v~~HPm 149 (335)
|-|||.......-..+ ....++++.+|.|+.-. .+..++..++ .+...+.+..|
T Consensus 225 INaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY~P~~T~ll~~A~~---~G~~~~~Gl~M 282 (312)
T 3t4e_A 225 TNGTKVGMKPLENESLIGDVSLLRPELLVTECVYNPHMTKLLQQAQQ---AGCKTIDGYGM 282 (312)
T ss_dssp EECSSTTSTTSTTCCSCCCGGGSCTTCEEEECCCSSSSCHHHHHHHH---TTCEEECHHHH
T ss_pred EECCcCCCCCCCCCcccCCHHHcCCCCEEEEeccCCCCCHHHHHHHH---CCCeEECcHHH
Confidence 9999987421100111 11346788999998643 2344444443 24455544433
No 282
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=97.70 E-value=4.9e-05 Score=72.27 Aligned_cols=70 Identities=17% Similarity=0.182 Sum_probs=53.4
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHH-HHHhCCCceecChhhHhhcCCCEEEEecCc
Q 044593 28 KSTSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPA-VRQQLNAPFFADLNDLCELHPDVVLLSTSI 98 (335)
Q Consensus 28 ~~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~-~a~~~g~~~~~~~~~~~~~~aDvVIlavp~ 98 (335)
...+++|+|+|+|+||..+|+.|.+.|++|+++|++++..+ .+.+.|.... +.+++...+||+++.|...
T Consensus 170 ~L~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~ga~~v-~~~~ll~~~~DIvip~a~~ 240 (364)
T 1leh_A 170 SLEGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAV-APNAIYGVTCDIFAPCALG 240 (364)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEEC-CGGGTTTCCCSEEEECSCS
T ss_pred CCCcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEE-ChHHHhccCCcEeeccchH
Confidence 35688999999999999999999999999999999986554 4444565443 3344432489999987533
No 283
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=97.68 E-value=6.6e-05 Score=70.69 Aligned_cols=91 Identities=16% Similarity=0.155 Sum_probs=61.1
Q ss_pred CCeEEEEcccHHHHHHHHHHHHc-CCeEE-EEcCCCCcH-HHHHhCC------------------CceecChhhHhhcCC
Q 044593 31 SLKIAVIGFGNFGQFLAKAFARH-HHTLL-VHSRSDHSP-AVRQQLN------------------APFFADLNDLCELHP 89 (335)
Q Consensus 31 ~~kI~IIG~G~mG~siA~~L~~~-G~~V~-~~dr~~~~~-~~a~~~g------------------~~~~~~~~~~~~~~a 89 (335)
++||+|+|+|.||..+++.|.+. +++++ +.|+++... ..+...| +....+..++. .++
T Consensus 1 mikVgIiGaG~iG~~l~r~L~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~l~v~~~~~~~~-~~v 79 (337)
T 1cf2_P 1 MKAVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDML-DEA 79 (337)
T ss_dssp CEEEEEECCSTTHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHH-HTC
T ss_pred CeEEEEEeECHHHHHHHHHHHcCCCcEEEEEEcCChhHHHHhcCCcchhhccccccceeeecCCceEEcCCHHHHh-cCC
Confidence 35899999999999999999874 45764 457765533 2233222 22222445555 689
Q ss_pred CEEEEecCchhHHHHHhhccccccCCccEEEEcCCCC
Q 044593 90 DVVLLSTSILSTQSVLKSIPFQRLKRSTLFVDVLSVK 126 (335)
Q Consensus 90 DvVIlavp~~~~~~vl~~l~~~~l~~~~iVvd~~SvK 126 (335)
|+||.|+|.....+....+ ++.|..|+|.++.+
T Consensus 80 DvV~~atp~~~~~~~a~~~----l~aG~~VId~sp~~ 112 (337)
T 1cf2_P 80 DIVIDCTPEGIGAKNLKMY----KEKGIKAIFQGGEK 112 (337)
T ss_dssp SEEEECCSTTHHHHHHHHH----HHHTCCEEECTTSC
T ss_pred CEEEECCCchhhHHHHHHH----HHcCCEEEEecCCC
Confidence 9999999998776666544 33456677876653
No 284
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=97.68 E-value=3.6e-05 Score=70.94 Aligned_cols=85 Identities=18% Similarity=0.274 Sum_probs=58.9
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHH----cCCeEE-EEcCCCCcHHHHHhCCCceecChhhHhh-cCCCEEEEecCchhH
Q 044593 28 KSTSLKIAVIGFGNFGQFLAKAFAR----HHHTLL-VHSRSDHSPAVRQQLNAPFFADLNDLCE-LHPDVVLLSTSILST 101 (335)
Q Consensus 28 ~~~~~kI~IIG~G~mG~siA~~L~~----~G~~V~-~~dr~~~~~~~a~~~g~~~~~~~~~~~~-~~aDvVIlavp~~~~ 101 (335)
.++++||+|||+|.||...+..+.+ .+.+++ ++|+++. +...|+. ..+.++++. .+.|+|++|||....
T Consensus 4 ~~~~~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~~~----a~~~g~~-~~~~~ell~~~~vD~V~i~tp~~~H 78 (294)
T 1lc0_A 4 NSGKFGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRREL----GSLDEVR-QISLEDALRSQEIDVAYICSESSSH 78 (294)
T ss_dssp CCCSEEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSSCC----CEETTEE-BCCHHHHHHCSSEEEEEECSCGGGH
T ss_pred CCCcceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECchHH----HHHcCCC-CCCHHHHhcCCCCCEEEEeCCcHhH
Confidence 3567899999999999999988865 345654 6787642 2234554 367888762 268999999999876
Q ss_pred HHHHhhccccccCCcc-EEEE
Q 044593 102 QSVLKSIPFQRLKRST-LFVD 121 (335)
Q Consensus 102 ~~vl~~l~~~~l~~~~-iVvd 121 (335)
.++.... ++.|. ++++
T Consensus 79 ~~~~~~a----l~aGkhVl~E 95 (294)
T 1lc0_A 79 EDYIRQF----LQAGKHVLVE 95 (294)
T ss_dssp HHHHHHH----HHTTCEEEEE
T ss_pred HHHHHHH----HHCCCcEEEe
Confidence 6665543 22343 5665
No 285
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=97.66 E-value=4.6e-05 Score=73.48 Aligned_cols=89 Identities=19% Similarity=0.286 Sum_probs=59.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHHcC---CeEEEEcCCCCcHHH-HHhC------CCce-------ecChhhHhhcC--CCE
Q 044593 31 SLKIAVIGFGNFGQFLAKAFARHH---HTLLVHSRSDHSPAV-RQQL------NAPF-------FADLNDLCELH--PDV 91 (335)
Q Consensus 31 ~~kI~IIG~G~mG~siA~~L~~~G---~~V~~~dr~~~~~~~-a~~~------g~~~-------~~~~~~~~~~~--aDv 91 (335)
|+||+|||+|.+|..++..|.+.| .+|+++||+++..+. +.+. .+.. ..+..+++ ++ +|+
T Consensus 1 M~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l-~~~~~Dv 79 (405)
T 4ina_A 1 MAKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALI-NEVKPQI 79 (405)
T ss_dssp -CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHH-HHHCCSE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHH-HhhCCCE
Confidence 469999999999999999999988 389999999865432 2221 1211 12233444 44 899
Q ss_pred EEEecCchhHHHHHhhccccccCCccEEEEcCC
Q 044593 92 VLLSTSILSTQSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 92 VIlavp~~~~~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
||.|+|+.....+++.. +..+..++|+++
T Consensus 80 Vin~ag~~~~~~v~~a~----l~~g~~vvD~a~ 108 (405)
T 4ina_A 80 VLNIALPYQDLTIMEAC----LRTGVPYLDTAN 108 (405)
T ss_dssp EEECSCGGGHHHHHHHH----HHHTCCEEESSC
T ss_pred EEECCCcccChHHHHHH----HHhCCCEEEecC
Confidence 99999987655554432 334556666644
No 286
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=97.66 E-value=9.5e-05 Score=68.86 Aligned_cols=88 Identities=20% Similarity=0.217 Sum_probs=59.2
Q ss_pred CeEEEEcc-cHHHHHHHHHHHHcC--CeEEEEcCCCCcHHHHHhC--C-----Cce---ecChhhHhhcCCCEEEEecCc
Q 044593 32 LKIAVIGF-GNFGQFLAKAFARHH--HTLLVHSRSDHSPAVRQQL--N-----APF---FADLNDLCELHPDVVLLSTSI 98 (335)
Q Consensus 32 ~kI~IIG~-G~mG~siA~~L~~~G--~~V~~~dr~~~~~~~a~~~--g-----~~~---~~~~~~~~~~~aDvVIlavp~ 98 (335)
|||+|||+ |.+|..++..|...| .+|+++|+++ ....+.++ . +.. +++..+++ +++|+||++...
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~-~~~~a~dL~~~~~~~~l~~~~~t~d~~~a~-~~aDvVvi~ag~ 78 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH-TPGVAADLSHIETRATVKGYLGPEQLPDCL-KGCDVVVIPAGV 78 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS-HHHHHHHHTTSSSSCEEEEEESGGGHHHHH-TTCSEEEECCSC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc-cHHHHHHHhccCcCceEEEecCCCCHHHHh-CCCCEEEECCCc
Confidence 69999998 999999999999888 6899999997 22222221 1 112 13566666 899999998743
Q ss_pred h----------------hHHHHHhhccccccCCccEEEEcC
Q 044593 99 L----------------STQSVLKSIPFQRLKRSTLFVDVL 123 (335)
Q Consensus 99 ~----------------~~~~vl~~l~~~~l~~~~iVvd~~ 123 (335)
. .+.++.+.+. . ..++.+|+.++
T Consensus 79 ~~~~g~~r~dl~~~n~~i~~~i~~~i~-~-~~p~a~viv~s 117 (314)
T 1mld_A 79 PRKPGMTRDDLFNTNATIVATLTAACA-Q-HCPDAMICIIS 117 (314)
T ss_dssp CCCTTCCGGGGHHHHHHHHHHHHHHHH-H-HCTTSEEEECS
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHH-h-hCCCeEEEEEC
Confidence 2 1344555553 2 34666766664
No 287
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=97.66 E-value=0.00015 Score=66.08 Aligned_cols=77 Identities=19% Similarity=0.277 Sum_probs=61.3
Q ss_pred CCCCCeEEEEcccHH-HHHHHHHHHHc--CCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCchhHHHH
Q 044593 28 KSTSLKIAVIGFGNF-GQFLAKAFARH--HHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILSTQSV 104 (335)
Q Consensus 28 ~~~~~kI~IIG~G~m-G~siA~~L~~~--G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~~~~v 104 (335)
...++++.|||.|.| |..+|..|... |..|+++++.. .++.+.+ .++|+||.|++....
T Consensus 155 ~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t--------------~~L~~~~-~~ADIVI~Avg~p~~--- 216 (281)
T 2c2x_A 155 SIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGT--------------RDLPALT-RQADIVVAAVGVAHL--- 216 (281)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTC--------------SCHHHHH-TTCSEEEECSCCTTC---
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECch--------------hHHHHHH-hhCCEEEECCCCCcc---
Confidence 346789999999975 99999999999 88999997665 3445566 799999999986542
Q ss_pred HhhccccccCCccEEEEcCCC
Q 044593 105 LKSIPFQRLKRSTLFVDVLSV 125 (335)
Q Consensus 105 l~~l~~~~l~~~~iVvd~~Sv 125 (335)
+....+++|++|+|++.-
T Consensus 217 ---I~~~~vk~GavVIDVgi~ 234 (281)
T 2c2x_A 217 ---LTADMVRPGAAVIDVGVS 234 (281)
T ss_dssp ---BCGGGSCTTCEEEECCEE
T ss_pred ---cCHHHcCCCcEEEEccCC
Confidence 223457899999999854
No 288
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=97.66 E-value=0.00012 Score=67.43 Aligned_cols=76 Identities=13% Similarity=0.201 Sum_probs=60.3
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHHcCCeE-EEEcCCCCcHHHHHhCCCceecChhhHhhc--CCCEEEEecCchhHHHHH
Q 044593 30 TSLKIAVIGF-GNFGQFLAKAFARHHHTL-LVHSRSDHSPAVRQQLNAPFFADLNDLCEL--HPDVVLLSTSILSTQSVL 105 (335)
Q Consensus 30 ~~~kI~IIG~-G~mG~siA~~L~~~G~~V-~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~--~aDvVIlavp~~~~~~vl 105 (335)
+.+||+|+|+ |.||..+++.+.+.|+++ ..+++..... .-.|+..+.++.++. + .+|++|+++|+....+++
T Consensus 6 ~~~~VaVvGasG~~G~~~~~~l~~~g~~~v~~VnP~~~g~---~i~G~~vy~sl~el~-~~~~~Dv~Ii~vp~~~~~~~~ 81 (288)
T 1oi7_A 6 RETRVLVQGITGREGQFHTKQMLTYGTKIVAGVTPGKGGM---EVLGVPVYDTVKEAV-AHHEVDASIIFVPAPAAADAA 81 (288)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTC---EETTEEEESSHHHHH-HHSCCSEEEECCCHHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHcCCeEEEEECCCCCCc---eECCEEeeCCHHHHh-hcCCCCEEEEecCHHHHHHHH
Confidence 4679999997 999999999999999984 3455543101 135777888888886 6 899999999999999988
Q ss_pred hhcc
Q 044593 106 KSIP 109 (335)
Q Consensus 106 ~~l~ 109 (335)
++..
T Consensus 82 ~ea~ 85 (288)
T 1oi7_A 82 LEAA 85 (288)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8874
No 289
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=97.65 E-value=7.1e-05 Score=67.63 Aligned_cols=66 Identities=17% Similarity=0.114 Sum_probs=51.8
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCce----ecChhhHhhcCCCEEEEecCc
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPF----FADLNDLCELHPDVVLLSTSI 98 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~----~~~~~~~~~~~aDvVIlavp~ 98 (335)
++|||.|+|+|.+|+.++..|.+.|++|++++|++.........++.. ..+++ . .++|+||.+...
T Consensus 4 m~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~--~-~~~d~vi~~a~~ 73 (286)
T 3ius_A 4 MTGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPS--L-DGVTHLLISTAP 73 (286)
T ss_dssp -CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEEEESSSSCCC--C-TTCCEEEECCCC
T ss_pred CcCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeEEEecccccc--c-CCCCEEEECCCc
Confidence 468999999999999999999999999999999987665555556542 12333 4 789999998754
No 290
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=97.62 E-value=8.6e-05 Score=70.01 Aligned_cols=68 Identities=21% Similarity=0.244 Sum_probs=51.0
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHHcCC--eEEEEcCCCCcHH-HHH---h-----CCCceecChhhHhhcCCCEEEEe
Q 044593 28 KSTSLKIAVIGF-GNFGQFLAKAFARHHH--TLLVHSRSDHSPA-VRQ---Q-----LNAPFFADLNDLCELHPDVVLLS 95 (335)
Q Consensus 28 ~~~~~kI~IIG~-G~mG~siA~~L~~~G~--~V~~~dr~~~~~~-~a~---~-----~g~~~~~~~~~~~~~~aDvVIla 95 (335)
-+.++||+|||+ |.+|+.+|..+...|. +|+++|++++..+ .+. . ..+..+++..+.+ ++||+||++
T Consensus 5 ~~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~t~d~~~al-~dADvVvit 83 (343)
T 3fi9_A 5 YLTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTFTSDIKEAL-TDAKYIVSS 83 (343)
T ss_dssp CSCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEEESCHHHHH-TTEEEEEEC
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEEcCCHHHHh-CCCCEEEEc
Confidence 457789999997 9999999999999884 8999999875432 111 1 1223445666666 899999998
Q ss_pred c
Q 044593 96 T 96 (335)
Q Consensus 96 v 96 (335)
.
T Consensus 84 a 84 (343)
T 3fi9_A 84 G 84 (343)
T ss_dssp C
T ss_pred c
Confidence 6
No 291
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=97.62 E-value=0.00013 Score=67.02 Aligned_cols=83 Identities=19% Similarity=0.177 Sum_probs=57.5
Q ss_pred cccCCCCCeEEEEc-ccHHHHHHHHHHHHc-CCeEE-EEcCCCCc---HHHH-----HhCCCceecChhhHhhcCCCEEE
Q 044593 25 QYVKSTSLKIAVIG-FGNFGQFLAKAFARH-HHTLL-VHSRSDHS---PAVR-----QQLNAPFFADLNDLCELHPDVVL 93 (335)
Q Consensus 25 ~~~~~~~~kI~IIG-~G~mG~siA~~L~~~-G~~V~-~~dr~~~~---~~~a-----~~~g~~~~~~~~~~~~~~aDvVI 93 (335)
|+..++++||+|+| +|.||..+++.+.+. +++++ ++|+++.. .+.. ...|+..+.++++++ .++|+||
T Consensus 15 ~~~m~~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~G~~~~gv~v~~dl~~ll-~~aDVvI 93 (288)
T 3ijp_A 15 QTQGPGSMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILIGSDFLGVRITDDPESAF-SNTEGIL 93 (288)
T ss_dssp ------CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGTTCSCCSCBCBSCHHHHT-TSCSEEE
T ss_pred hhhccCCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchHHhhccCcCCceeeCCHHHHh-cCCCEEE
Confidence 44445668999999 899999999998764 67765 55887532 1111 134667788999987 7999999
Q ss_pred EecCchhHHHHHhhc
Q 044593 94 LSTSILSTQSVLKSI 108 (335)
Q Consensus 94 lavp~~~~~~vl~~l 108 (335)
-++++....+.+...
T Consensus 94 DFT~p~a~~~~~~~~ 108 (288)
T 3ijp_A 94 DFSQPQASVLYANYA 108 (288)
T ss_dssp ECSCHHHHHHHHHHH
T ss_pred EcCCHHHHHHHHHHH
Confidence 999888776666554
No 292
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=97.60 E-value=0.00011 Score=69.06 Aligned_cols=90 Identities=20% Similarity=0.265 Sum_probs=61.4
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHHc-CCeEEEEcCCC---C---cHHHHH--hCC---Cceec--ChhhHhhcCCCEEEEe
Q 044593 31 SLKIAVIG-FGNFGQFLAKAFARH-HHTLLVHSRSD---H---SPAVRQ--QLN---APFFA--DLNDLCELHPDVVLLS 95 (335)
Q Consensus 31 ~~kI~IIG-~G~mG~siA~~L~~~-G~~V~~~dr~~---~---~~~~a~--~~g---~~~~~--~~~~~~~~~aDvVIla 95 (335)
|+||+|+| .|.+|..+.+.|.+. .+++..+..+. . .....- -.| ..... +..++. .++|+||+|
T Consensus 4 M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~~~~~~~~-~~~Dvvf~a 82 (337)
T 3dr3_A 4 MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPMSDISEFS-PGVDVVFLA 82 (337)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEESSGGGTC-TTCSEEEEC
T ss_pred ceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEeccCCHHHHh-cCCCEEEEC
Confidence 47999999 699999999999884 45776553222 1 121110 012 22222 445554 689999999
Q ss_pred cCchhHHHHHhhccccccCCccEEEEcCCC
Q 044593 96 TSILSTQSVLKSIPFQRLKRSTLFVDVLSV 125 (335)
Q Consensus 96 vp~~~~~~vl~~l~~~~l~~~~iVvd~~Sv 125 (335)
+|.....++...+ ++.|+.|+|+++-
T Consensus 83 ~p~~~s~~~~~~~----~~~g~~vIDlSa~ 108 (337)
T 3dr3_A 83 TAHEVSHDLAPQF----LEAGCVVFDLSGA 108 (337)
T ss_dssp SCHHHHHHHHHHH----HHTTCEEEECSST
T ss_pred CChHHHHHHHHHH----HHCCCEEEEcCCc
Confidence 9998888877765 3578899999875
No 293
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=97.59 E-value=0.00024 Score=64.93 Aligned_cols=76 Identities=21% Similarity=0.244 Sum_probs=60.5
Q ss_pred CCCCeEEEEcccH-HHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCchhHHHHHhh
Q 044593 29 STSLKIAVIGFGN-FGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILSTQSVLKS 107 (335)
Q Consensus 29 ~~~~kI~IIG~G~-mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~~~~vl~~ 107 (335)
..++++.|||.|. +|..+|..|...|..|+++.+... ++.+.+ .++|+||.+++....
T Consensus 159 l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T~--------------~L~~~~-~~ADIVI~Avg~p~~------ 217 (286)
T 4a5o_A 159 LYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTR--------------DLADHV-SRADLVVVAAGKPGL------ 217 (286)
T ss_dssp CTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTCS--------------CHHHHH-HTCSEEEECCCCTTC------
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCCc--------------CHHHHh-ccCCEEEECCCCCCC------
Confidence 4678999999865 899999999999999999976432 445666 799999999985432
Q ss_pred ccccccCCccEEEEcCCC
Q 044593 108 IPFQRLKRSTLFVDVLSV 125 (335)
Q Consensus 108 l~~~~l~~~~iVvd~~Sv 125 (335)
+....+++|++|+|++..
T Consensus 218 I~~~~vk~GavVIDvgi~ 235 (286)
T 4a5o_A 218 VKGEWIKEGAIVIDVGIN 235 (286)
T ss_dssp BCGGGSCTTCEEEECCSC
T ss_pred CCHHHcCCCeEEEEeccc
Confidence 223568999999999864
No 294
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=97.58 E-value=0.00016 Score=68.47 Aligned_cols=90 Identities=18% Similarity=0.160 Sum_probs=60.0
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHHcC-CeEEEEcCC--CC--cHHHHHhC-----------CCce-ecChhhHhhc-CCCE
Q 044593 31 SLKIAVIG-FGNFGQFLAKAFARHH-HTLLVHSRS--DH--SPAVRQQL-----------NAPF-FADLNDLCEL-HPDV 91 (335)
Q Consensus 31 ~~kI~IIG-~G~mG~siA~~L~~~G-~~V~~~dr~--~~--~~~~a~~~-----------g~~~-~~~~~~~~~~-~aDv 91 (335)
++||+|+| .|.+|..+++.|.+.+ ++|+.+.++ .. ........ .+.. ..+++++. + ++|+
T Consensus 8 ~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dv 86 (354)
T 1ys4_A 8 KIKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVIPTDPKHEE-FEDVDI 86 (354)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCEESCTTSGG-GTTCCE
T ss_pred cceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccHHHhcccccccccccCceeeEEEeCCHHHHh-cCCCCE
Confidence 46999999 8999999999998765 477666322 21 12111000 1111 12445554 5 8999
Q ss_pred EEEecCchhHHHHHhhccccccCCccEEEEcCCC
Q 044593 92 VLLSTSILSTQSVLKSIPFQRLKRSTLFVDVLSV 125 (335)
Q Consensus 92 VIlavp~~~~~~vl~~l~~~~l~~~~iVvd~~Sv 125 (335)
||+|+|.....+....+ ++.|..|+|.++.
T Consensus 87 V~~atp~~~~~~~a~~~----~~aG~~VId~s~~ 116 (354)
T 1ys4_A 87 VFSALPSDLAKKFEPEF----AKEGKLIFSNASA 116 (354)
T ss_dssp EEECCCHHHHHHHHHHH----HHTTCEEEECCST
T ss_pred EEECCCchHHHHHHHHH----HHCCCEEEECCch
Confidence 99999998877777665 3467889999875
No 295
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=97.57 E-value=3.6e-05 Score=72.13 Aligned_cols=77 Identities=17% Similarity=0.283 Sum_probs=56.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHHcCCeEE-EEcCCC-CcHH----HHHhCCC--ceecChhhHhh-cCCCEEEEecCchhH
Q 044593 31 SLKIAVIGFGNFGQFLAKAFARHHHTLL-VHSRSD-HSPA----VRQQLNA--PFFADLNDLCE-LHPDVVLLSTSILST 101 (335)
Q Consensus 31 ~~kI~IIG~G~mG~siA~~L~~~G~~V~-~~dr~~-~~~~----~a~~~g~--~~~~~~~~~~~-~~aDvVIlavp~~~~ 101 (335)
++||+|||+|.+|...+..+ ..+.+|+ ++|+++ +..+ .+.+.|+ ..++|.++++. .+.|+|++|||...-
T Consensus 2 ~~rvgiiG~G~~~~~~~~~l-~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~I~tp~~~H 80 (337)
T 3ip3_A 2 SLKICVIGSSGHFRYALEGL-DEECSITGIAPGVPEEDLSKLEKAISEMNIKPKKYNNWWEMLEKEKPDILVINTVFSLN 80 (337)
T ss_dssp CEEEEEECSSSCHHHHHTTC-CTTEEEEEEECSSTTCCCHHHHHHHHTTTCCCEECSSHHHHHHHHCCSEEEECSSHHHH
T ss_pred ceEEEEEccchhHHHHHHhc-CCCcEEEEEecCCchhhHHHHHHHHHHcCCCCcccCCHHHHhcCCCCCEEEEeCCcchH
Confidence 57999999999999888877 5567765 679887 3332 2233465 46788888872 369999999999876
Q ss_pred HHHHhhc
Q 044593 102 QSVLKSI 108 (335)
Q Consensus 102 ~~vl~~l 108 (335)
.++....
T Consensus 81 ~~~~~~a 87 (337)
T 3ip3_A 81 GKILLEA 87 (337)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6655543
No 296
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=97.56 E-value=0.00021 Score=62.86 Aligned_cols=71 Identities=14% Similarity=0.280 Sum_probs=53.0
Q ss_pred cCCCCCeEEEEcc-cHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCC-cee-----cChhhHhhcCCCEEEEecCc
Q 044593 27 VKSTSLKIAVIGF-GNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNA-PFF-----ADLNDLCELHPDVVLLSTSI 98 (335)
Q Consensus 27 ~~~~~~kI~IIG~-G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~-~~~-----~~~~~~~~~~aDvVIlavp~ 98 (335)
...++|+|.|.|. |.+|..+++.|.+.|++|++++|+++..+.....++ ... .+..+.+ .++|+||.+...
T Consensus 17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~-~~~D~vi~~ag~ 94 (236)
T 3e8x_A 17 LYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLEEDFSHAF-ASIDAVVFAAGS 94 (236)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTTSCCGGGG-TTCSEEEECCCC
T ss_pred cCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccHHHHHHHH-cCCCEEEECCCC
Confidence 4457899999995 999999999999999999999999877655555565 321 2334455 789999988764
No 297
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=97.55 E-value=0.00013 Score=66.72 Aligned_cols=79 Identities=19% Similarity=0.139 Sum_probs=55.6
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHH-cCCeEE-EEcCCCCcH---HHH-----HhCCCceecChhhHhhcCCCEEEEecC
Q 044593 29 STSLKIAVIGF-GNFGQFLAKAFAR-HHHTLL-VHSRSDHSP---AVR-----QQLNAPFFADLNDLCELHPDVVLLSTS 97 (335)
Q Consensus 29 ~~~~kI~IIG~-G~mG~siA~~L~~-~G~~V~-~~dr~~~~~---~~a-----~~~g~~~~~~~~~~~~~~aDvVIlavp 97 (335)
++.|||+|+|+ |.||..++..+.+ .|++++ ++|++++.. +.. ...++..++++++++ .++|+||-+++
T Consensus 3 ~~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l-~~~DvVIDft~ 81 (273)
T 1dih_A 3 DANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVK-DDFDVFIDFTR 81 (273)
T ss_dssp CCBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTT-TSCSEEEECSC
T ss_pred CCCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHh-cCCCEEEEcCC
Confidence 45689999998 9999999998875 577875 778876421 111 112444566777777 68999997777
Q ss_pred chhHHHHHhhc
Q 044593 98 ILSTQSVLKSI 108 (335)
Q Consensus 98 ~~~~~~vl~~l 108 (335)
+....+.+...
T Consensus 82 p~~~~~~~~~a 92 (273)
T 1dih_A 82 PEGTLNHLAFC 92 (273)
T ss_dssp HHHHHHHHHHH
T ss_pred hHHHHHHHHHH
Confidence 77666666554
No 298
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=97.55 E-value=4.4e-05 Score=70.09 Aligned_cols=95 Identities=15% Similarity=0.254 Sum_probs=63.4
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHH-HHHhCCC--------c-eecChhhHhhcCCCEEEEecCc
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPA-VRQQLNA--------P-FFADLNDLCELHPDVVLLSTSI 98 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~-~a~~~g~--------~-~~~~~~~~~~~~aDvVIlavp~ 98 (335)
...+++.|+|.|.||.+++..|.+.| +|++++|+.+..+ .+.+.+. . ...+..+.. .++|+||.|+|.
T Consensus 126 l~~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~-~~~DilVn~ag~ 203 (287)
T 1nvt_A 126 VKDKNIVIYGAGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVDL-DGVDIIINATPI 203 (287)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTCCC-TTCCEEEECSCT
T ss_pred cCCCEEEEECchHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeHHHhh-CCCCEEEECCCC
Confidence 35679999999999999999999999 9999999875432 2222110 0 112223334 689999999997
Q ss_pred hhHHHHH-hhc-cccccCCccEEEEcCCC
Q 044593 99 LSTQSVL-KSI-PFQRLKRSTLFVDVLSV 125 (335)
Q Consensus 99 ~~~~~vl-~~l-~~~~l~~~~iVvd~~Sv 125 (335)
......- ..+ ....++++.+|+|+...
T Consensus 204 ~~~~~~~~~~~~~~~~l~~~~~v~Dv~y~ 232 (287)
T 1nvt_A 204 GMYPNIDVEPIVKAEKLREDMVVMDLIYN 232 (287)
T ss_dssp TCTTCCSSCCSSCSTTCCSSSEEEECCCS
T ss_pred CCCCCCCCCCCCCHHHcCCCCEEEEeeeC
Confidence 6532100 001 12357789999999753
No 299
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=97.52 E-value=5.2e-05 Score=66.98 Aligned_cols=71 Identities=11% Similarity=0.133 Sum_probs=49.9
Q ss_pred CCCCeEEEEc-ccHHHHHHHHHHHHcC-CeEEEEcCCCCcHHHHHhCCCce----ecC---hhhHhhcCCCEEEEecCch
Q 044593 29 STSLKIAVIG-FGNFGQFLAKAFARHH-HTLLVHSRSDHSPAVRQQLNAPF----FAD---LNDLCELHPDVVLLSTSIL 99 (335)
Q Consensus 29 ~~~~kI~IIG-~G~mG~siA~~L~~~G-~~V~~~dr~~~~~~~a~~~g~~~----~~~---~~~~~~~~aDvVIlavp~~ 99 (335)
+.+++|.|.| .|.+|..++..|.+.| ++|++++|+++........++.. .++ ..+++ +++|+||.+....
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-~~~D~vv~~a~~~ 99 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAM-QGQDIVYANLTGE 99 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHH-TTCSEEEEECCST
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHh-cCCCEEEEcCCCC
Confidence 4567899999 6999999999999999 89999999976443221222221 122 33445 7899999887654
Q ss_pred h
Q 044593 100 S 100 (335)
Q Consensus 100 ~ 100 (335)
.
T Consensus 100 ~ 100 (236)
T 3qvo_A 100 D 100 (236)
T ss_dssp T
T ss_pred c
Confidence 3
No 300
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=97.50 E-value=0.00014 Score=68.74 Aligned_cols=91 Identities=14% Similarity=0.107 Sum_probs=60.3
Q ss_pred CCCCeEEEEc-ccHHHHHHHHHHHHcC-----C-eEEEEc-CC-C-CcHHHH----Hh-CCCcee-cChhhHhhcCCCEE
Q 044593 29 STSLKIAVIG-FGNFGQFLAKAFARHH-----H-TLLVHS-RS-D-HSPAVR----QQ-LNAPFF-ADLNDLCELHPDVV 92 (335)
Q Consensus 29 ~~~~kI~IIG-~G~mG~siA~~L~~~G-----~-~V~~~d-r~-~-~~~~~a----~~-~g~~~~-~~~~~~~~~~aDvV 92 (335)
|+++||+|+| .|.+|..+.+.|.+.+ . +++.+. ++ . +..... .. ..+... .+.++ . .++|+|
T Consensus 7 M~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~~~~~~~~-~-~~~DvV 84 (352)
T 2nqt_A 7 ANATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVEPTEAAV-L-GGHDAV 84 (352)
T ss_dssp CSCEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBCEECCHHH-H-TTCSEE
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccccceeeeccCCHHH-h-cCCCEE
Confidence 3467999999 8999999999999877 3 666553 32 2 112110 00 112211 23333 3 589999
Q ss_pred EEecCchhHHHHHhhccccccCCccEEEEcCCCC
Q 044593 93 LLSTSILSTQSVLKSIPFQRLKRSTLFVDVLSVK 126 (335)
Q Consensus 93 Ilavp~~~~~~vl~~l~~~~l~~~~iVvd~~SvK 126 (335)
|+|+|.....++...+ +.|..|+|+++--
T Consensus 85 f~alg~~~s~~~~~~~-----~~G~~vIDlSa~~ 113 (352)
T 2nqt_A 85 FLALPHGHSAVLAQQL-----SPETLIIDCGADF 113 (352)
T ss_dssp EECCTTSCCHHHHHHS-----CTTSEEEECSSTT
T ss_pred EECCCCcchHHHHHHH-----hCCCEEEEECCCc
Confidence 9999998877777655 3578999998764
No 301
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=97.49 E-value=0.0003 Score=66.71 Aligned_cols=90 Identities=16% Similarity=0.225 Sum_probs=59.5
Q ss_pred CCCCeEEEEc-ccHHHHHHHHHHHHcCC-eEEEE-cCCCCcHHHHHh----CCC---c-eecChhhHhhcCCCEEEEecC
Q 044593 29 STSLKIAVIG-FGNFGQFLAKAFARHHH-TLLVH-SRSDHSPAVRQQ----LNA---P-FFADLNDLCELHPDVVLLSTS 97 (335)
Q Consensus 29 ~~~~kI~IIG-~G~mG~siA~~L~~~G~-~V~~~-dr~~~~~~~a~~----~g~---~-~~~~~~~~~~~~aDvVIlavp 97 (335)
|+.+||+|+| .|.+|..+.+.|.+... +++.+ ++.....+.... .+. . ...+ ++.. .++|+||+|+|
T Consensus 14 M~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~~~~~~v~~dl~~~~-~~~~-~~vDvVf~atp 91 (359)
T 1xyg_A 14 EKDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHLRAQKLPTLVSVK-DADF-STVDAVFCCLP 91 (359)
T ss_dssp -CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCGGGTTSCCCCCBCGG-GCCG-GGCSEEEECCC
T ss_pred ccCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCchhcCcccccceecc-hhHh-cCCCEEEEcCC
Confidence 4557999999 89999999999988754 77665 433222221211 121 0 0111 3333 57999999999
Q ss_pred chhHHHHHhhccccccCCccEEEEcCCC
Q 044593 98 ILSTQSVLKSIPFQRLKRSTLFVDVLSV 125 (335)
Q Consensus 98 ~~~~~~vl~~l~~~~l~~~~iVvd~~Sv 125 (335)
.....+....+ +.|..|+|.++-
T Consensus 92 ~~~s~~~a~~~-----~aG~~VId~sa~ 114 (359)
T 1xyg_A 92 HGTTQEIIKEL-----PTALKIVDLSAD 114 (359)
T ss_dssp TTTHHHHHHTS-----CTTCEEEECSST
T ss_pred chhHHHHHHHH-----hCCCEEEECCcc
Confidence 98877766544 467899999874
No 302
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=97.49 E-value=3e-05 Score=68.21 Aligned_cols=80 Identities=13% Similarity=0.098 Sum_probs=54.4
Q ss_pred CCCCCeEEEEcccHHHHHHHHHH--HHcCCeEE-EEcCCCCcHHH-HHhCCCceecChhhHhhcCCCEEEEecCchhHHH
Q 044593 28 KSTSLKIAVIGFGNFGQFLAKAF--ARHHHTLL-VHSRSDHSPAV-RQQLNAPFFADLNDLCELHPDVVLLSTSILSTQS 103 (335)
Q Consensus 28 ~~~~~kI~IIG~G~mG~siA~~L--~~~G~~V~-~~dr~~~~~~~-a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~~~~ 103 (335)
....++|+|||+|.+|..+++.+ .. |++++ ++|.+++.... +....+...+++.+++.++.|+|++|+|.....+
T Consensus 77 ~~~~~rV~IIGaG~~G~~la~~~~~~~-g~~iVg~~D~dp~k~g~~i~gv~V~~~~dl~ell~~~ID~ViIA~Ps~~~~e 155 (211)
T 2dt5_A 77 LNRKWGLCIVGMGRLGSALADYPGFGE-SFELRGFFDVDPEKVGRPVRGGVIEHVDLLPQRVPGRIEIALLTVPREAAQK 155 (211)
T ss_dssp TTSCEEEEEECCSHHHHHHHHCSCCCS-SEEEEEEEESCTTTTTCEETTEEEEEGGGHHHHSTTTCCEEEECSCHHHHHH
T ss_pred cCCCCEEEEECccHHHHHHHHhHhhcC-CcEEEEEEeCCHHHHhhhhcCCeeecHHhHHHHHHcCCCEEEEeCCchhHHH
Confidence 34567999999999999999863 33 77765 56888765431 1111222345667766226999999999887666
Q ss_pred HHhhc
Q 044593 104 VLKSI 108 (335)
Q Consensus 104 vl~~l 108 (335)
+...+
T Consensus 156 i~~~l 160 (211)
T 2dt5_A 156 AADLL 160 (211)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66655
No 303
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=97.48 E-value=0.00034 Score=64.88 Aligned_cols=77 Identities=13% Similarity=0.189 Sum_probs=59.7
Q ss_pred CCCeEEEE-cc-cHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhc--CCCEEEEecCchhHHHHH
Q 044593 30 TSLKIAVI-GF-GNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCEL--HPDVVLLSTSILSTQSVL 105 (335)
Q Consensus 30 ~~~kI~II-G~-G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~--~aDvVIlavp~~~~~~vl 105 (335)
...+++|| |+ |.+|..+++.|.+.|++ .+++.||.... ..-.|+..+.++.++. + .+|++++++|+....+++
T Consensus 12 ~~~siaVV~Gasg~~G~~~~~~l~~~G~~-~v~~VnP~~~g-~~i~G~~vy~sl~el~-~~~~vD~avI~vP~~~~~~~~ 88 (305)
T 2fp4_A 12 DKNTKVICQGFTGKQGTFHSQQALEYGTN-LVGGTTPGKGG-KTHLGLPVFNTVKEAK-EQTGATASVIYVPPPFAAAAI 88 (305)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHTCE-EEEEECTTCTT-CEETTEEEESSHHHHH-HHHCCCEEEECCCHHHHHHHH
T ss_pred CCCcEEEEECCCCCHHHHHHHHHHHCCCc-EEEEeCCCcCc-ceECCeeeechHHHhh-hcCCCCEEEEecCHHHHHHHH
Confidence 35678888 97 99999999999999998 33454543210 0125778888888886 6 899999999999999988
Q ss_pred hhcc
Q 044593 106 KSIP 109 (335)
Q Consensus 106 ~~l~ 109 (335)
+++.
T Consensus 89 ~e~i 92 (305)
T 2fp4_A 89 NEAI 92 (305)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8874
No 304
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=97.46 E-value=5.4e-05 Score=66.51 Aligned_cols=82 Identities=15% Similarity=0.219 Sum_probs=57.0
Q ss_pred cCCCCCeEEEEcccHHHHHHHHHH--HHcCCeEE-EEcCCCC-cHHHHHhCCCce--ecChhhHhh-cCCCEEEEecCch
Q 044593 27 VKSTSLKIAVIGFGNFGQFLAKAF--ARHHHTLL-VHSRSDH-SPAVRQQLNAPF--FADLNDLCE-LHPDVVLLSTSIL 99 (335)
Q Consensus 27 ~~~~~~kI~IIG~G~mG~siA~~L--~~~G~~V~-~~dr~~~-~~~~a~~~g~~~--~~~~~~~~~-~~aDvVIlavp~~ 99 (335)
...+..+|+|||+|.+|..++..+ .+.|++++ ++|.|++ ....+.-.|+.+ .+++.+++. .+.|.+|+|+|..
T Consensus 80 g~~~~~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D~dp~~kiG~~~i~GvpV~~~~dL~~~v~~~~Id~vIIAvPs~ 159 (212)
T 3keo_A 80 NDHSTTNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDLDSNDLVGKTTEDGIPVYGISTINDHLIDSDIETAILTVPST 159 (212)
T ss_dssp TTTSCEEEEEECCSHHHHHHTTCCCCTTSSEEEEEEEECTTSTTTTCBCTTCCBEEEGGGHHHHC-CCSCCEEEECSCGG
T ss_pred CCCCCCEEEEECcCHHHHHHHHhhhcccCCeEEEEEEeCCchhccCceeECCeEEeCHHHHHHHHHHcCCCEEEEecCch
Confidence 334567999999999999999984 44577765 5698887 543201235543 345555551 3699999999998
Q ss_pred hHHHHHhhc
Q 044593 100 STQSVLKSI 108 (335)
Q Consensus 100 ~~~~vl~~l 108 (335)
...++.+.+
T Consensus 160 ~aq~v~d~l 168 (212)
T 3keo_A 160 EAQEVADIL 168 (212)
T ss_dssp GHHHHHHHH
T ss_pred hHHHHHHHH
Confidence 877777665
No 305
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=97.43 E-value=0.00026 Score=66.74 Aligned_cols=90 Identities=11% Similarity=0.065 Sum_probs=59.0
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHHcCC-eEEEEcCCC-CcHHHHHh----CCC--ceecChhhHhhcCCCEEEEecCchh
Q 044593 30 TSLKIAVIG-FGNFGQFLAKAFARHHH-TLLVHSRSD-HSPAVRQQ----LNA--PFFADLNDLCELHPDVVLLSTSILS 100 (335)
Q Consensus 30 ~~~kI~IIG-~G~mG~siA~~L~~~G~-~V~~~dr~~-~~~~~a~~----~g~--~~~~~~~~~~~~~aDvVIlavp~~~ 100 (335)
+++||+|+| .|.+|..+.+.|.+... +++.+.... ...+.... .|. ....+.++ . .++|+||+|+|...
T Consensus 3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~~~~g~~~~~~~~~~~-~-~~vDvV~~a~g~~~ 80 (345)
T 2ozp_A 3 GKKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHPNLRGRTNLKFVPPEK-L-EPADILVLALPHGV 80 (345)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCGGGTTTCCCBCBCGGG-C-CCCSEEEECCCTTH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCchhcCcccccccchhH-h-cCCCEEEEcCCcHH
Confidence 357999999 79999999999987654 766554332 21111110 111 11122333 3 68999999999988
Q ss_pred HHHHHhhccccccCCccEEEEcCCC
Q 044593 101 TQSVLKSIPFQRLKRSTLFVDVLSV 125 (335)
Q Consensus 101 ~~~vl~~l~~~~l~~~~iVvd~~Sv 125 (335)
..++...+ ++.|..|+|+++-
T Consensus 81 s~~~a~~~----~~aG~~VId~Sa~ 101 (345)
T 2ozp_A 81 FAREFDRY----SALAPVLVDLSAD 101 (345)
T ss_dssp HHHTHHHH----HTTCSEEEECSST
T ss_pred HHHHHHHH----HHCCCEEEEcCcc
Confidence 77766654 4567889999874
No 306
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=97.43 E-value=0.0007 Score=63.75 Aligned_cols=91 Identities=13% Similarity=0.127 Sum_probs=57.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHHc-CCeEEE-EcCCCCcHH-HHHhC--------------------CCceecChhhHhhc
Q 044593 31 SLKIAVIGFGNFGQFLAKAFARH-HHTLLV-HSRSDHSPA-VRQQL--------------------NAPFFADLNDLCEL 87 (335)
Q Consensus 31 ~~kI~IIG~G~mG~siA~~L~~~-G~~V~~-~dr~~~~~~-~a~~~--------------------g~~~~~~~~~~~~~ 87 (335)
++||+|+|+|.||..+++.|.+. +++|++ .|++++... .++.. ++....+..++. .
T Consensus 2 mikVgI~G~G~IGr~v~r~l~~~~~~evvaV~d~~~~~~~~l~~~dg~s~~g~~~~~~~v~~~~~~~l~v~~~~~~~~-~ 80 (343)
T 2yyy_A 2 PAKVLINGYGSIGKRVADAVSMQDDMEVIGVTKTKPDFEARLAVEKGYKLFVAIPDNERVKLFEDAGIPVEGTILDII-E 80 (343)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSCCHHHHHHHHHTTCCCCCBGGGTG-G
T ss_pred ceEEEEECCCHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhcCCccccccCCCceeecccCCeEEECCchHHhc-c
Confidence 36999999999999999999876 467654 466544332 12221 222222333444 5
Q ss_pred CCCEEEEecCchhHHHHHhhccccccCCccEEEEcCCC
Q 044593 88 HPDVVLLSTSILSTQSVLKSIPFQRLKRSTLFVDVLSV 125 (335)
Q Consensus 88 ~aDvVIlavp~~~~~~vl~~l~~~~l~~~~iVvd~~Sv 125 (335)
++|+|+.|+|.....+.... .+++.|+.|++.++.
T Consensus 81 ~vDiV~eatg~~~s~~~a~~---~~l~aG~~VI~sap~ 115 (343)
T 2yyy_A 81 DADIVVDGAPKKIGKQNLEN---IYKPHKVKAILQGGE 115 (343)
T ss_dssp GCSEEEECCCTTHHHHHHHH---TTTTTTCEEEECTTS
T ss_pred CCCEEEECCCccccHHHHHH---HHHHCCCEEEECCCc
Confidence 89999999998875555541 234566667765443
No 307
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=97.42 E-value=0.00032 Score=66.35 Aligned_cols=90 Identities=21% Similarity=0.179 Sum_probs=62.1
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCchh-HHHHHhh
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILS-TQSVLKS 107 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~-~~~vl~~ 107 (335)
..+++|+|+|+|++|..+|+.+...|.+|+++|+++...+.+.+.|.... +.+++...+||+++-|--... ..+.++.
T Consensus 173 L~GktV~I~G~GnVG~~~A~~l~~~GakVvvsD~~~~~~~~a~~~ga~~v-~~~ell~~~~DIliP~A~~~~I~~~~~~~ 251 (355)
T 1c1d_A 173 LDGLTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAV-ALEDVLSTPCDVFAPCAMGGVITTEVART 251 (355)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEEC-CGGGGGGCCCSEEEECSCSCCBCHHHHHH
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHhcCCEEe-ChHHhhcCccceecHhHHHhhcCHHHHhh
Confidence 46789999999999999999999999999999998654445566676544 445655138999986532222 2233333
Q ss_pred ccccccCCccEEEEcCCC
Q 044593 108 IPFQRLKRSTLFVDVLSV 125 (335)
Q Consensus 108 l~~~~l~~~~iVvd~~Sv 125 (335)
+ + ..+|++.+..
T Consensus 252 l-----k-~~iVie~AN~ 263 (355)
T 1c1d_A 252 L-----D-CSVVAGAANN 263 (355)
T ss_dssp C-----C-CSEECCSCTT
T ss_pred C-----C-CCEEEECCCC
Confidence 3 2 3577776654
No 308
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=97.38 E-value=0.00024 Score=63.82 Aligned_cols=35 Identities=14% Similarity=0.277 Sum_probs=32.3
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCC-eEEEEcCCC
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHHH-TLLVHSRSD 64 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G~-~V~~~dr~~ 64 (335)
...+|.|||+|.+|+.++..|...|. +|+++|++.
T Consensus 30 ~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 30 KDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred hCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 35799999999999999999999997 899999986
No 309
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=97.38 E-value=0.00025 Score=68.96 Aligned_cols=72 Identities=18% Similarity=0.208 Sum_probs=53.0
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHc-CCeE-EEEcCCCCcHHHH-HhC-C----------------------CceecCh
Q 044593 28 KSTSLKIAVIGFGNFGQFLAKAFARH-HHTL-LVHSRSDHSPAVR-QQL-N----------------------APFFADL 81 (335)
Q Consensus 28 ~~~~~kI~IIG~G~mG~siA~~L~~~-G~~V-~~~dr~~~~~~~a-~~~-g----------------------~~~~~~~ 81 (335)
.++..||||||+|.||..++..+.+. +.+| .++|++++..+.+ .+. | ...++|.
T Consensus 20 ~~k~IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~~~era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v~~D~ 99 (446)
T 3upl_A 20 TGKPIRIGLIGAGEMGTDIVTQVARMQGIEVGALSARRLPNTFKAIRTAYGDEENAREATTESAMTRAIEAGKIAVTDDN 99 (446)
T ss_dssp TTCCEEEEEECCSHHHHHHHHHHTTSSSEEEEEEECSSTHHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEEESCH
T ss_pred cCCceEEEEECChHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhcCCccccccccchhhhhhhhccCCceEECCH
Confidence 45678999999999999999988764 5565 5779998765433 222 4 2356788
Q ss_pred hhHhh-cCCCEEEEecCch
Q 044593 82 NDLCE-LHPDVVLLSTSIL 99 (335)
Q Consensus 82 ~~~~~-~~aDvVIlavp~~ 99 (335)
++++. .+.|+|++|||..
T Consensus 100 eeLL~d~dIDaVviaTp~p 118 (446)
T 3upl_A 100 DLILSNPLIDVIIDATGIP 118 (446)
T ss_dssp HHHHTCTTCCEEEECSCCH
T ss_pred HHHhcCCCCCEEEEcCCCh
Confidence 88762 2589999999864
No 310
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=97.37 E-value=0.00096 Score=61.66 Aligned_cols=65 Identities=15% Similarity=0.169 Sum_probs=45.1
Q ss_pred CeEEEEc-ccHHHHHHHHHHHHcCC--eEEEEcC--CCCcHHH-HHh--------CCCceecChhhHhhcCCCEEEEecC
Q 044593 32 LKIAVIG-FGNFGQFLAKAFARHHH--TLLVHSR--SDHSPAV-RQQ--------LNAPFFADLNDLCELHPDVVLLSTS 97 (335)
Q Consensus 32 ~kI~IIG-~G~mG~siA~~L~~~G~--~V~~~dr--~~~~~~~-a~~--------~g~~~~~~~~~~~~~~aDvVIlavp 97 (335)
|||+|+| +|.+|.+++..|...|+ ++.++|+ +++..+. +.+ ..+....+..+.+ +++|+||++..
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~~~~~a~-~~aDvVi~~ag 79 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYEDT-AGSDVVVITAG 79 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGGGG-TTCSEEEECCC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEeCCHHHh-CCCCEEEEcCC
Confidence 6999999 99999999999998886 7899999 6543211 111 1122221224445 79999999875
No 311
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=97.36 E-value=0.00048 Score=63.49 Aligned_cols=77 Identities=13% Similarity=0.181 Sum_probs=59.6
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhc--CCCEEEEecCchhHHHHHh
Q 044593 30 TSLKIAVIGF-GNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCEL--HPDVVLLSTSILSTQSVLK 106 (335)
Q Consensus 30 ~~~kI~IIG~-G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~--~aDvVIlavp~~~~~~vl~ 106 (335)
...+|+|+|+ |.||..+++.+.+.|++ .+++.++.... ..-.|+..+.++.++. + .+|++|++||+....+++.
T Consensus 12 ~~~~v~V~Gasg~~G~~~~~~l~~~g~~-~V~~VnP~~~g-~~i~G~~vy~sl~el~-~~~~~Dv~ii~vp~~~~~~~v~ 88 (294)
T 2yv1_A 12 ENTKAIVQGITGRQGSFHTKKMLECGTK-IVGGVTPGKGG-QNVHGVPVFDTVKEAV-KETDANASVIFVPAPFAKDAVF 88 (294)
T ss_dssp TTCCEEEETTTSHHHHHHHHHHHHTTCC-EEEEECTTCTT-CEETTEEEESSHHHHH-HHHCCCEEEECCCHHHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHHhCCCe-EEEEeCCCCCC-ceECCEeeeCCHHHHh-hcCCCCEEEEccCHHHHHHHHH
Confidence 3457889997 99999999999999998 44444554210 0125778888888886 6 8999999999999998888
Q ss_pred hcc
Q 044593 107 SIP 109 (335)
Q Consensus 107 ~l~ 109 (335)
+..
T Consensus 89 ea~ 91 (294)
T 2yv1_A 89 EAI 91 (294)
T ss_dssp HHH
T ss_pred HHH
Confidence 874
No 312
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=97.35 E-value=0.00092 Score=57.54 Aligned_cols=65 Identities=18% Similarity=0.202 Sum_probs=48.5
Q ss_pred CeEEEEc-ccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCce-ecCh----hhHhhcCCCEEEEecCc
Q 044593 32 LKIAVIG-FGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPF-FADL----NDLCELHPDVVLLSTSI 98 (335)
Q Consensus 32 ~kI~IIG-~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~-~~~~----~~~~~~~aDvVIlavp~ 98 (335)
|||.|+| .|.+|..++..|.+.|++|++++|+++...... .++.. ..|. .+.+ .++|+||.+...
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~~~~~~D~~d~~~~~~-~~~d~vi~~ag~ 71 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-KDINILQKDIFDLTLSDL-SDQNVVVDAYGI 71 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-SSSEEEECCGGGCCHHHH-TTCSEEEECCCS
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-CCCeEEeccccChhhhhh-cCCCEEEECCcC
Confidence 6899999 599999999999999999999999986554322 34432 1111 1344 789999998754
No 313
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=97.34 E-value=0.00033 Score=63.09 Aligned_cols=80 Identities=16% Similarity=0.168 Sum_probs=59.5
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCCeE-EEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCchhHHHHHhhc
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHHHTL-LVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILSTQSVLKSI 108 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G~~V-~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~~~~vl~~l 108 (335)
..|||+++|+|.||..+++. . ++++ .+|+ ++.. +.|+..++|.++++ .++|+|+-|.+...+.+....+
T Consensus 11 ~~~rV~i~G~GaIG~~v~~~--~-~leLv~v~~--~k~g----elgv~a~~d~d~ll-a~pD~VVe~A~~~av~e~~~~i 80 (253)
T 1j5p_A 11 HHMTVLIIGMGNIGKKLVEL--G-NFEKIYAYD--RISK----DIPGVVRLDEFQVP-SDVSTVVECASPEAVKEYSLQI 80 (253)
T ss_dssp CCCEEEEECCSHHHHHHHHH--S-CCSEEEEEC--SSCC----CCSSSEECSSCCCC-TTCCEEEECSCHHHHHHHHHHH
T ss_pred ccceEEEECcCHHHHHHHhc--C-CcEEEEEEe--cccc----ccCceeeCCHHHHh-hCCCEEEECCCHHHHHHHHHHH
Confidence 46999999999999999998 4 7876 5667 2211 22777778888888 6999999999888777755544
Q ss_pred cccccCCccEEEEcC
Q 044593 109 PFQRLKRSTLFVDVL 123 (335)
Q Consensus 109 ~~~~l~~~~iVvd~~ 123 (335)
++.|.-|+-++
T Consensus 81 ----L~aG~dvv~~S 91 (253)
T 1j5p_A 81 ----LKNPVNYIIIS 91 (253)
T ss_dssp ----TTSSSEEEECC
T ss_pred ----HHCCCCEEEcC
Confidence 45666665554
No 314
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=97.33 E-value=0.00046 Score=64.84 Aligned_cols=90 Identities=18% Similarity=0.207 Sum_probs=58.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHHc-CCeEEEE-cC--CCCcHHHHHhC----C----C---------------cee--cCh
Q 044593 31 SLKIAVIGFGNFGQFLAKAFARH-HHTLLVH-SR--SDHSPAVRQQL----N----A---------------PFF--ADL 81 (335)
Q Consensus 31 ~~kI~IIG~G~mG~siA~~L~~~-G~~V~~~-dr--~~~~~~~a~~~----g----~---------------~~~--~~~ 81 (335)
++||+|+|+|.||..+++.+.+. +.+|+++ |+ +++......+. | . ... .++
T Consensus 3 ~ikVgI~G~G~iGr~~~R~l~~~~~vevvaI~d~~~~~~~~a~l~~~ds~~g~~~~~~~~~~~~l~v~g~~i~v~~~~d~ 82 (335)
T 1u8f_O 3 KVKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERDP 82 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSG
T ss_pred ceEEEEEccCHHHHHHHHHHHcCCCcEEEEecCCCCCHHHHHHHhhcccccCCCCCceEEcCCeEEECCeEEEEEecCCH
Confidence 46999999999999999998775 4677544 54 33332222221 1 0 011 244
Q ss_pred hhHhh--cCCCEEEEecCchhHHHHHhhccccccCCccEEEEcCC
Q 044593 82 NDLCE--LHPDVVLLSTSILSTQSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 82 ~~~~~--~~aDvVIlavp~~~~~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
+++.+ .++|+||.|+|.....+..... ++.|..++|++.
T Consensus 83 ~~l~~~~~~vDvV~eatg~~~~~e~a~~~----l~aGak~V~iSa 123 (335)
T 1u8f_O 83 SKIKWGDAGAEYVVESTGVFTTMEKAGAH----LQGGAKRVIISA 123 (335)
T ss_dssp GGCCTTTTTCCEEEECSSSCCSHHHHGGG----GGGTCSEEEESS
T ss_pred HHCccccCCCCEEEECCCchhhHHHHHHH----HhCCCeEEEecc
Confidence 44411 3799999999998877776554 556777777764
No 315
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=97.32 E-value=0.0013 Score=61.20 Aligned_cols=90 Identities=20% Similarity=0.276 Sum_probs=57.3
Q ss_pred CeEEEEc-ccHHHHHHHHHHHHc-C--CeEEEEcCCCCcHHHHHh---CCC--cee----cChhhHhhcCCCEEEEecCc
Q 044593 32 LKIAVIG-FGNFGQFLAKAFARH-H--HTLLVHSRSDHSPAVRQQ---LNA--PFF----ADLNDLCELHPDVVLLSTSI 98 (335)
Q Consensus 32 ~kI~IIG-~G~mG~siA~~L~~~-G--~~V~~~dr~~~~~~~a~~---~g~--~~~----~~~~~~~~~~aDvVIlavp~ 98 (335)
|||+||| +|.+|.+++..|... + .++.++|+++...-.+.+ ... ... ++..+.+ +++|+||++.+.
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~~~~G~a~Dl~~~~~~~~v~~~~~~~~~~~~-~~aDivii~ag~ 79 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATPAL-EGADVVLISAGV 79 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSSTTHHHHHHHHHTSCSSEEEEEECSSCCHHHH-TTCSEEEECCSC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCCCchhHHHHhhCCCCCceEEEecCCCcHHHh-CCCCEEEEeCCC
Confidence 7999999 899999999999876 5 389999998732211221 111 121 1334445 899999998743
Q ss_pred hh----------------HHHHHhhccccccCCccEEEEcCC
Q 044593 99 LS----------------TQSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 99 ~~----------------~~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
.. +.++.+.+. . ..++.+|+.+++
T Consensus 80 ~rkpG~~R~dll~~N~~I~~~i~~~i~-~-~~p~a~vlvvtN 119 (312)
T 3hhp_A 80 ARKPGMDRSDLFNVNAGIVKNLVQQVA-K-TCPKACIGIITN 119 (312)
T ss_dssp SCCTTCCHHHHHHHHHHHHHHHHHHHH-H-HCTTSEEEECSS
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHH-H-HCCCcEEEEecC
Confidence 21 233334442 2 356777777754
No 316
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=97.32 E-value=0.0006 Score=63.60 Aligned_cols=66 Identities=18% Similarity=0.133 Sum_probs=49.7
Q ss_pred CCeEEEEcccHHHHH-HHHHHHHcCCeEEEEcCCCC--cHHHHHhCCCcee--cChhhHhhcCCCEEEEec
Q 044593 31 SLKIAVIGFGNFGQF-LAKAFARHHHTLLVHSRSDH--SPAVRQQLNAPFF--ADLNDLCELHPDVVLLST 96 (335)
Q Consensus 31 ~~kI~IIG~G~mG~s-iA~~L~~~G~~V~~~dr~~~--~~~~a~~~g~~~~--~~~~~~~~~~aDvVIlav 96 (335)
++||.|||.|.+|.+ +|+.|.+.|++|+++|.++. ..+...+.|+... .+.+.+...++|+||++.
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~~~~~~~L~~~gi~v~~g~~~~~l~~~~~d~vV~Sp 74 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYPPMSTQLEALGIDVYEGFDAAQLDEFKADVYVIGN 74 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHTTCEEEESCCGGGGGSCCCSEEEECT
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCCcHHHHHHHhCCCEEECCCCHHHcCCCCCCEEEECC
Confidence 579999999999996 99999999999999998763 3445666788654 233333102699999853
No 317
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=97.32 E-value=0.0004 Score=66.31 Aligned_cols=94 Identities=17% Similarity=0.116 Sum_probs=59.8
Q ss_pred ccCCCCCeEEEEc-ccHHHHHHHHHHHHcCC-eEE-EE-cCC-C-CcHHHH-------------HhCCCceecChhhHhh
Q 044593 26 YVKSTSLKIAVIG-FGNFGQFLAKAFARHHH-TLL-VH-SRS-D-HSPAVR-------------QQLNAPFFADLNDLCE 86 (335)
Q Consensus 26 ~~~~~~~kI~IIG-~G~mG~siA~~L~~~G~-~V~-~~-dr~-~-~~~~~a-------------~~~g~~~~~~~~~~~~ 86 (335)
...|+++||+||| .|..|.-+.+.|.+..+ ++. ++ +++ . +..... .+.-+... +..+..
T Consensus 14 ~~~M~~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l~aS~~saGk~~~~~~~~~~~~~~p~~~~~~~v~~~-~~~~~~- 91 (381)
T 3hsk_A 14 GSHMSVKKAGVLGATGSVGQRFILLLSKHPEFEIHALGASSRSAGKKYKDAASWKQTETLPETEQDIVVQEC-KPEGNF- 91 (381)
T ss_dssp ----CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHCCCCCSSCCCHHHHTCBCEES-SSCTTG-
T ss_pred cccCCccEEEEECCCChHHHHHHHHHHcCCCceEEEeeccccccCCCHHHhcccccccccccccccceEEeC-chhhhc-
Confidence 3456778999999 69999999999887653 664 33 332 2 122211 11111111 222123
Q ss_pred cCCCEEEEecCchhHHHHHhhccccccCCccEEEEcCCC
Q 044593 87 LHPDVVLLSTSILSTQSVLKSIPFQRLKRSTLFVDVLSV 125 (335)
Q Consensus 87 ~~aDvVIlavp~~~~~~vl~~l~~~~l~~~~iVvd~~Sv 125 (335)
.++|+||+|+|.....++...+ ++.|+.|+|+++-
T Consensus 92 ~~~Dvvf~alp~~~s~~~~~~~----~~~G~~VIDlSa~ 126 (381)
T 3hsk_A 92 LECDVVFSGLDADVAGDIEKSF----VEAGLAVVSNAKN 126 (381)
T ss_dssp GGCSEEEECCCHHHHHHHHHHH----HHTTCEEEECCST
T ss_pred ccCCEEEECCChhHHHHHHHHH----HhCCCEEEEcCCc
Confidence 6899999999999888888766 3478899999875
No 318
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=97.31 E-value=0.0012 Score=58.37 Aligned_cols=89 Identities=13% Similarity=0.107 Sum_probs=62.9
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCc-H-HHHHhCCCcee---cChhhHhhcCCCEEEEecCchhHH
Q 044593 28 KSTSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHS-P-AVRQQLNAPFF---ADLNDLCELHPDVVLLSTSILSTQ 102 (335)
Q Consensus 28 ~~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~-~-~~a~~~g~~~~---~~~~~~~~~~aDvVIlavp~~~~~ 102 (335)
+..+++|.|||.|.+|..-+..|.+.|.+|++++++... . +++.+.++... -...+ + .++|+||.||......
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~~i~~~~~~~d-L-~~adLVIaAT~d~~~N 105 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQLRVKRKKVGEED-L-LNVFFIVVATNDQAVN 105 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCEEECSCCCGGG-S-SSCSEEEECCCCTHHH
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHcCCcEEEECCCCHhH-h-CCCCEEEECCCCHHHH
Confidence 457899999999999999999999999999999987642 2 33333344321 12233 3 7899999999888777
Q ss_pred HHHhhccccccCCccEEEEcC
Q 044593 103 SVLKSIPFQRLKRSTLFVDVL 123 (335)
Q Consensus 103 ~vl~~l~~~~l~~~~iVvd~~ 123 (335)
..+.... + ..+.+++.
T Consensus 106 ~~I~~~a----k-~gi~VNvv 121 (223)
T 3dfz_A 106 KFVKQHI----K-NDQLVNMA 121 (223)
T ss_dssp HHHHHHS----C-TTCEEEC-
T ss_pred HHHHHHH----h-CCCEEEEe
Confidence 6666553 2 23556654
No 319
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=97.31 E-value=0.00075 Score=58.39 Aligned_cols=66 Identities=24% Similarity=0.263 Sum_probs=49.1
Q ss_pred CeEEEEcc-cHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCcee-cCh----hhHhhcCCCEEEEecCc
Q 044593 32 LKIAVIGF-GNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFF-ADL----NDLCELHPDVVLLSTSI 98 (335)
Q Consensus 32 ~kI~IIG~-G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~-~~~----~~~~~~~aDvVIlavp~ 98 (335)
|||.|+|. |.+|..++..|.+.|++|++++|++.........++... .|+ .+.+ .++|+||.+...
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~d~vi~~ag~ 72 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTEADL-DSVDAVVDALSV 72 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCHHHH-TTCSEEEECCCC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCCCceEEecccccccHhhc-ccCCEEEECCcc
Confidence 68999995 999999999999999999999999765543333444321 111 1344 789999998754
No 320
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=97.29 E-value=0.00051 Score=66.86 Aligned_cols=77 Identities=12% Similarity=0.163 Sum_probs=53.7
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHH----------cCCeE-EEEcCCCCcHHHHHhCCCceecChhhHhh-cCCCEEEEec
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFAR----------HHHTL-LVHSRSDHSPAVRQQLNAPFFADLNDLCE-LHPDVVLLST 96 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~----------~G~~V-~~~dr~~~~~~~a~~~g~~~~~~~~~~~~-~~aDvVIlav 96 (335)
|+..||+|||+|.||+.++..|.+ .+.+| .++|+++...+.. ..+...+++.++++. .+.|+|+.|+
T Consensus 8 Mk~irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~~~~~~~-~~~~~~~~d~~ell~d~diDvVve~t 86 (444)
T 3mtj_A 8 MKPIHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNLDKAEAL-AGGLPLTTNPFDVVDDPEIDIVVELI 86 (444)
T ss_dssp CSCEEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSCHHHHHHH-HTTCCEESCTHHHHTCTTCCEEEECC
T ss_pred hCcccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECCHHHhhhh-cccCcccCCHHHHhcCCCCCEEEEcC
Confidence 456799999999999999988764 23455 4668887544322 235567788888762 3689999999
Q ss_pred Cc-hhHHHHHh
Q 044593 97 SI-LSTQSVLK 106 (335)
Q Consensus 97 p~-~~~~~vl~ 106 (335)
|. ....+++.
T Consensus 87 p~~~~h~~~~~ 97 (444)
T 3mtj_A 87 GGLEPARELVM 97 (444)
T ss_dssp CSSTTHHHHHH
T ss_pred CCchHHHHHHH
Confidence 96 55444443
No 321
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=97.25 E-value=0.00022 Score=64.51 Aligned_cols=64 Identities=19% Similarity=0.280 Sum_probs=46.9
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCce-------ecChhhHhhcC-CCEEEEecC
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPF-------FADLNDLCELH-PDVVLLSTS 97 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~-------~~~~~~~~~~~-aDvVIlavp 97 (335)
|++|||.|.|+|.+|+.++..|.+.|++|++++|++.... .++.. ..+..+++ ++ +|+||-+..
T Consensus 1 M~~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~~~~~~~Dl~d~~~~~~~~-~~~~d~vih~a~ 72 (286)
T 3gpi_A 1 MSLSKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQPMP----AGVQTLIADVTRPDTLASIV-HLRPEILVYCVA 72 (286)
T ss_dssp -CCCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTSCCC----TTCCEEECCTTCGGGCTTGG-GGCCSEEEECHH
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCccccc----cCCceEEccCCChHHHHHhh-cCCCCEEEEeCC
Confidence 4578999999999999999999999999999999876421 23321 12223344 44 999998764
No 322
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=97.24 E-value=0.00016 Score=67.98 Aligned_cols=89 Identities=11% Similarity=0.099 Sum_probs=57.9
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHHcC---CeEEEE-cCCCC-c-HHHHHhCCCceec-ChhhHhhcCCCEEEEecCchhH
Q 044593 30 TSLKIAVIG-FGNFGQFLAKAFARHH---HTLLVH-SRSDH-S-PAVRQQLNAPFFA-DLNDLCELHPDVVLLSTSILST 101 (335)
Q Consensus 30 ~~~kI~IIG-~G~mG~siA~~L~~~G---~~V~~~-dr~~~-~-~~~a~~~g~~~~~-~~~~~~~~~aDvVIlavp~~~~ 101 (335)
+++||+|+| .|.+|..+.+.|.+.+ ++++.+ +++.. . .. .....+.... +.. .. .++|+||.|+|....
T Consensus 2 ~~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~~~-~~~~~i~~~~~~~~-~~-~~vDvVf~a~g~~~s 78 (336)
T 2r00_A 2 QQFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKTYR-FNGKTVRVQNVEEF-DW-SQVHIALFSAGGELS 78 (336)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCEEE-ETTEEEEEEEGGGC-CG-GGCSEEEECSCHHHH
T ss_pred CccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCcee-ecCceeEEecCChH-Hh-cCCCEEEECCCchHH
Confidence 468999999 8999999999998874 356554 33221 1 11 0000111111 122 22 579999999998887
Q ss_pred HHHHhhccccccCCccEEEEcCCC
Q 044593 102 QSVLKSIPFQRLKRSTLFVDVLSV 125 (335)
Q Consensus 102 ~~vl~~l~~~~l~~~~iVvd~~Sv 125 (335)
.+....+ ++.|..|+|.++-
T Consensus 79 ~~~a~~~----~~~G~~vId~s~~ 98 (336)
T 2r00_A 79 AKWAPIA----AEAGVVVIDNTSH 98 (336)
T ss_dssp HHHHHHH----HHTTCEEEECSST
T ss_pred HHHHHHH----HHcCCEEEEcCCc
Confidence 7777655 4568899999864
No 323
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=97.22 E-value=0.0007 Score=63.97 Aligned_cols=95 Identities=16% Similarity=0.159 Sum_probs=57.1
Q ss_pred ccCCCCCeEEEEcccHHHHHHHHHHHHc-CCeEEEE-cCCCCc--HHHHHhC----C-------------------Ccee
Q 044593 26 YVKSTSLKIAVIGFGNFGQFLAKAFARH-HHTLLVH-SRSDHS--PAVRQQL----N-------------------APFF 78 (335)
Q Consensus 26 ~~~~~~~kI~IIG~G~mG~siA~~L~~~-G~~V~~~-dr~~~~--~~~a~~~----g-------------------~~~~ 78 (335)
.+.+.++||+|+|+|.+|..+.+.|.+. .++|+.+ |+.... .....+. | +..+
T Consensus 12 ~~~~~~ikVgI~G~G~iGr~llR~l~~~p~veivaindp~~~~~~~a~ll~~ds~hg~~~~~v~~~~~~l~v~g~~i~v~ 91 (354)
T 3cps_A 12 ENLYFQGTLGINGFGRIGRLVLRACMERNDITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEVSGKDLCINGKVVKVF 91 (354)
T ss_dssp ------CEEEEECCSHHHHHHHHHHHTCSSCEEEEEECTTSCHHHHHHHHHCCTTTCSCSSCEEECC-CEEETTEEEEEE
T ss_pred cCcCcceEEEEECCCHHHHHHHHHHHcCCCeEEEEecCCCCChhHhhhhhcccccCCCCCCcEEEeCCEEEECCeEEEEE
Confidence 3455678999999999999999999876 5677655 412221 1111111 0 0111
Q ss_pred --cChhhHhh--cCCCEEEEecCchhHHHHHhhccccccCCcc--EEEEcCC
Q 044593 79 --ADLNDLCE--LHPDVVLLSTSILSTQSVLKSIPFQRLKRST--LFVDVLS 124 (335)
Q Consensus 79 --~~~~~~~~--~~aDvVIlavp~~~~~~vl~~l~~~~l~~~~--iVvd~~S 124 (335)
.++.++.+ .++|+||.|+|.....+....+ ++.|. +|+|.++
T Consensus 92 ~~~dp~~i~w~~~~vDvV~eatg~~~s~e~a~~~----l~~GakkvVId~pa 139 (354)
T 3cps_A 92 QAKDPAEIPWGASGAQIVCESTGVFTTEEKASLH----LKGGAKKVIISAPP 139 (354)
T ss_dssp CCSCGGGCCHHHHTCCEEEECSSSCCSHHHHGGG----GTTTCSEEEESSCC
T ss_pred ecCChHHCCcccCCCCEEEECCCchhhHHHHHHH----HHcCCcEEEEeCCC
Confidence 14444321 3799999999988877777654 44566 8888865
No 324
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=97.22 E-value=0.00098 Score=61.49 Aligned_cols=77 Identities=13% Similarity=0.176 Sum_probs=58.6
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhc--C-CCEEEEecCchhHHHHH
Q 044593 30 TSLKIAVIGF-GNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCEL--H-PDVVLLSTSILSTQSVL 105 (335)
Q Consensus 30 ~~~kI~IIG~-G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~--~-aDvVIlavp~~~~~~vl 105 (335)
...+|.|+|+ |.||..+++.+.+.|++ .++..++.... ..-.|+..+.++.++. + . +|++|++||+....+++
T Consensus 12 ~~~~vvV~Gasg~~G~~~~~~l~~~g~~-~v~~VnP~~~g-~~i~G~~vy~sl~el~-~~~~~~DvaIi~vp~~~~~~~v 88 (297)
T 2yv2_A 12 SETRVLVQGITGREGSFHAKAMLEYGTK-VVAGVTPGKGG-SEVHGVPVYDSVKEAL-AEHPEINTSIVFVPAPFAPDAV 88 (297)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCE-EEEEECTTCTT-CEETTEEEESSHHHHH-HHCTTCCEEEECCCGGGHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHHhCCCc-EEEEeCCCCCC-ceECCEeeeCCHHHHh-hcCCCCCEEEEecCHHHHHHHH
Confidence 3557888897 99999999999999998 33444443210 0125788888888886 4 4 99999999999999998
Q ss_pred hhcc
Q 044593 106 KSIP 109 (335)
Q Consensus 106 ~~l~ 109 (335)
++..
T Consensus 89 ~ea~ 92 (297)
T 2yv2_A 89 YEAV 92 (297)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8874
No 325
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=97.21 E-value=0.00052 Score=62.47 Aligned_cols=104 Identities=19% Similarity=0.179 Sum_probs=66.3
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCC-eEEEEcCCCCcHH-HHHhC-----CCceecChhhHhhcCCCEEEEecCchhH
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHH-TLLVHSRSDHSPA-VRQQL-----NAPFFADLNDLCELHPDVVLLSTSILST 101 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~-~V~~~dr~~~~~~-~a~~~-----g~~~~~~~~~~~~~~aDvVIlavp~~~~ 101 (335)
...+++.|+|+|-.+.+++.+|.+.|. +|++++|+.+..+ .+... .......... . +++|+||-|||....
T Consensus 123 ~~~~~~lilGaGGaarai~~aL~~~g~~~i~i~nRt~~ra~~la~~~~~~~~~~~~~~~~~~-~-~~~dliiNaTp~Gm~ 200 (269)
T 3tum_A 123 PAGKRALVIGCGGVGSAIAYALAEAGIASITLCDPSTARMGAVCELLGNGFPGLTVSTQFSG-L-EDFDLVANASPVGMG 200 (269)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHHCTTCEEESCCSC-S-TTCSEEEECSSTTCS
T ss_pred cccCeEEEEecHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHHHHhccCCcceehhhhhh-h-hcccccccCCccccC
Confidence 356899999999999999999999996 8999999976543 23221 1122222222 3 679999999997642
Q ss_pred HHH---H-hhccccccCCccEEEEcCC--CCchHHHHHHh
Q 044593 102 QSV---L-KSIPFQRLKRSTLFVDVLS--VKEFPRNLFLK 135 (335)
Q Consensus 102 ~~v---l-~~l~~~~l~~~~iVvd~~S--vK~~~~~~l~~ 135 (335)
... + ... ...++++.+|.|+.= ..+..++..++
T Consensus 201 ~~~~~p~~~~~-~~~l~~~~~v~D~vY~P~~T~ll~~A~~ 239 (269)
T 3tum_A 201 TRAELPLSAAL-LATLQPDTLVADVVTSPEITPLLNRARQ 239 (269)
T ss_dssp TTCCCSSCHHH-HHTCCTTSEEEECCCSSSSCHHHHHHHH
T ss_pred CCCCCCCChHH-HhccCCCcEEEEEccCCCCCHHHHHHHH
Confidence 110 0 000 123567889999852 23344444443
No 326
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=97.19 E-value=0.00056 Score=63.99 Aligned_cols=93 Identities=20% Similarity=0.083 Sum_probs=60.3
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHHcCC-------eEEEEcCC----CCcHH-HHH--hCC-------CceecChhhHhhc
Q 044593 30 TSLKIAVIGF-GNFGQFLAKAFARHHH-------TLLVHSRS----DHSPA-VRQ--QLN-------APFFADLNDLCEL 87 (335)
Q Consensus 30 ~~~kI~IIG~-G~mG~siA~~L~~~G~-------~V~~~dr~----~~~~~-~a~--~~g-------~~~~~~~~~~~~~ 87 (335)
+.|||+|+|+ |.+|++++..|...|+ +|.++|++ ++..+ .+. ..+ +...++..+.+ +
T Consensus 4 ~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~al-~ 82 (329)
T 1b8p_A 4 TPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTAF-K 82 (329)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHHHT-T
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHHHh-C
Confidence 4579999997 9999999999998885 89999998 33221 111 111 11235666666 8
Q ss_pred CCCEEEEecCchh----------------HHHHHhhccccccCCccEEEEcCC
Q 044593 88 HPDVVLLSTSILS----------------TQSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 88 ~aDvVIlavp~~~----------------~~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
++|+||++..... +.++++.+. ...+++++|+.+++
T Consensus 83 ~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~-~~~~p~a~ii~~SN 134 (329)
T 1b8p_A 83 DADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAID-AVASRNIKVLVVGN 134 (329)
T ss_dssp TCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHH-HHSCTTCEEEECSS
T ss_pred CCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH-HhcCCCeEEEEccC
Confidence 9999999764211 334445553 22236667777764
No 327
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=97.18 E-value=0.00082 Score=63.45 Aligned_cols=90 Identities=21% Similarity=0.318 Sum_probs=58.6
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHHcC-CeEEEE-cCC-CCcHHHHHhC-------------CCceec-ChhhHhhcCCCE
Q 044593 30 TSLKIAVIG-FGNFGQFLAKAFARHH-HTLLVH-SRS-DHSPAVRQQL-------------NAPFFA-DLNDLCELHPDV 91 (335)
Q Consensus 30 ~~~kI~IIG-~G~mG~siA~~L~~~G-~~V~~~-dr~-~~~~~~a~~~-------------g~~~~~-~~~~~~~~~aDv 91 (335)
+++||+|+| .|.+|..+.+.|.+.. ++++.+ +.+ .......... .+.... +.++ . .++|+
T Consensus 3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~-~~vDv 80 (350)
T 2ep5_A 3 DKIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLPIVSTNYED-H-KDVDV 80 (350)
T ss_dssp CCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTTSBHHHHCCCCSSSSCCHHHHTCBEECSSGGG-G-TTCSE
T ss_pred CCcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhcCCCHHHhcCcccccccccCCceeEEeeCCHHH-h-cCCCE
Confidence 467999999 8999999999998764 477655 222 1111111111 111211 3333 3 68999
Q ss_pred EEEecCchhHHHHHhhccccccCCccEEEEcCCC
Q 044593 92 VLLSTSILSTQSVLKSIPFQRLKRSTLFVDVLSV 125 (335)
Q Consensus 92 VIlavp~~~~~~vl~~l~~~~l~~~~iVvd~~Sv 125 (335)
||+|+|.....++...+ ++.|..|+|.++-
T Consensus 81 Vf~atp~~~s~~~a~~~----~~aG~~VId~s~~ 110 (350)
T 2ep5_A 81 VLSALPNELAESIELEL----VKNGKIVVSNASP 110 (350)
T ss_dssp EEECCCHHHHHHHHHHH----HHTTCEEEECSST
T ss_pred EEECCChHHHHHHHHHH----HHCCCEEEECCcc
Confidence 99999988777776655 3467789998864
No 328
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=97.16 E-value=0.00037 Score=59.32 Aligned_cols=67 Identities=16% Similarity=0.125 Sum_probs=47.6
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCce----ecC---hhhHhhcCCCEEEEecCc
Q 044593 31 SLKIAVIGF-GNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPF----FAD---LNDLCELHPDVVLLSTSI 98 (335)
Q Consensus 31 ~~kI~IIG~-G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~----~~~---~~~~~~~~aDvVIlavp~ 98 (335)
.|+|.|+|. |.+|..+++.|.+.|++|++++|++.........++.. ..+ ..+++ +++|+||.+...
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~-~~~d~vi~~a~~ 77 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTV-AGQDAVIVLLGT 77 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHH-TTCSEEEECCCC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccCCceEEEEecCCCHHHHHHHH-cCCCEEEECccC
Confidence 479999995 99999999999999999999999875432111223321 122 23444 689999988754
No 329
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=97.15 E-value=0.003 Score=60.14 Aligned_cols=90 Identities=14% Similarity=0.170 Sum_probs=67.2
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCC-eEEEEcCC----CCc---------HHHHHhCCC-ceecChhhHhhcCCCEEE
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHH-TLLVHSRS----DHS---------PAVRQQLNA-PFFADLNDLCELHPDVVL 93 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~-~V~~~dr~----~~~---------~~~a~~~g~-~~~~~~~~~~~~~aDvVI 93 (335)
....||.|+|+|.+|..+|+.|...|. +|+++|++ .+. ...+.+.+. ....++.+++ +++|++|
T Consensus 190 l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~~~~~~L~eav-~~ADVlI 268 (388)
T 1vl6_A 190 IEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNPERLSGDLETAL-EGADFFI 268 (388)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTTCCCSCHHHHH-TTCSEEE
T ss_pred CCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhccCchhhHHHHH-ccCCEEE
Confidence 456899999999999999999999998 89999998 432 233444321 2245688888 8999999
Q ss_pred EecCch-hHHHHHhhccccccCCccEEEEcCC
Q 044593 94 LSTSIL-STQSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 94 lavp~~-~~~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
=++.+. ..+++++.+. ++.+|++++.
T Consensus 269 G~Sap~l~t~emVk~Ma-----~~pIIfalSN 295 (388)
T 1vl6_A 269 GVSRGNILKPEWIKKMS-----RKPVIFALAN 295 (388)
T ss_dssp ECSCSSCSCHHHHTTSC-----SSCEEEECCS
T ss_pred EeCCCCccCHHHHHhcC-----CCCEEEEcCC
Confidence 766533 3577777653 5679999875
No 330
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=97.13 E-value=0.002 Score=60.19 Aligned_cols=91 Identities=18% Similarity=0.205 Sum_probs=70.5
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCcee-cChhhHhhcCCCEEEEecCch-hHHHHHh
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFF-ADLNDLCELHPDVVLLSTSIL-STQSVLK 106 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~-~~~~~~~~~~aDvVIlavp~~-~~~~vl~ 106 (335)
..+.+|.|+|+|.+|...+..++..|.+|++.+++++..+.++++|.... .+.+.+. +.+|+||-|+... .....++
T Consensus 175 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~-~~~D~vid~~g~~~~~~~~~~ 253 (348)
T 3two_A 175 TKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFYTDPKQCK-EELDFIISTIPTHYDLKDYLK 253 (348)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEESSGGGCC-SCEEEEEECCCSCCCHHHHHT
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeecCCHHHHh-cCCCEEEECCCcHHHHHHHHH
Confidence 45789999999999999999999999999999999999988999998532 3334433 4789999999877 5555554
Q ss_pred hccccccCCccEEEEcCCC
Q 044593 107 SIPFQRLKRSTLFVDVLSV 125 (335)
Q Consensus 107 ~l~~~~l~~~~iVvd~~Sv 125 (335)
.+ +++..++.++..
T Consensus 254 ~l-----~~~G~iv~~G~~ 267 (348)
T 3two_A 254 LL-----TYNGDLALVGLP 267 (348)
T ss_dssp TE-----EEEEEEEECCCC
T ss_pred HH-----hcCCEEEEECCC
Confidence 44 456677777644
No 331
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=97.13 E-value=0.00034 Score=65.84 Aligned_cols=88 Identities=14% Similarity=0.153 Sum_probs=56.6
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHHcCC---eEEEE-cCCCCcHHHHHhCCC--cee-cChhhHhhcCCCEEEEecCchhHH
Q 044593 31 SLKIAVIG-FGNFGQFLAKAFARHHH---TLLVH-SRSDHSPAVRQQLNA--PFF-ADLNDLCELHPDVVLLSTSILSTQ 102 (335)
Q Consensus 31 ~~kI~IIG-~G~mG~siA~~L~~~G~---~V~~~-dr~~~~~~~a~~~g~--~~~-~~~~~~~~~~aDvVIlavp~~~~~ 102 (335)
+|||+|+| .|.+|..+.+.|.++++ +++.+ +++..... ..-.|. ... .+..+ . .++|+||.|+|.....
T Consensus 6 ~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~-~~~~g~~i~~~~~~~~~-~-~~~DvV~~a~g~~~s~ 82 (340)
T 2hjs_A 6 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQR-MGFAESSLRVGDVDSFD-F-SSVGLAFFAAAAEVSR 82 (340)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCE-EEETTEEEECEEGGGCC-G-GGCSEEEECSCHHHHH
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCc-cccCCcceEEecCCHHH-h-cCCCEEEEcCCcHHHH
Confidence 47999999 79999999999987665 45444 44321100 000111 111 12222 3 6799999999988777
Q ss_pred HHHhhccccccCCccEEEEcCCC
Q 044593 103 SVLKSIPFQRLKRSTLFVDVLSV 125 (335)
Q Consensus 103 ~vl~~l~~~~l~~~~iVvd~~Sv 125 (335)
+....+ ++.|..++|+++.
T Consensus 83 ~~a~~~----~~aG~kvId~Sa~ 101 (340)
T 2hjs_A 83 AHAERA----RAAGCSVIDLSGA 101 (340)
T ss_dssp HHHHHH----HHTTCEEEETTCT
T ss_pred HHHHHH----HHCCCEEEEeCCC
Confidence 776655 3467889998764
No 332
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=97.11 E-value=0.00043 Score=64.57 Aligned_cols=91 Identities=10% Similarity=0.058 Sum_probs=62.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCce----ecChhhHh---hcCCCEEEEecCchhHHH
Q 044593 31 SLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPF----FADLNDLC---ELHPDVVLLSTSILSTQS 103 (335)
Q Consensus 31 ~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~----~~~~~~~~---~~~aDvVIlavp~~~~~~ 103 (335)
.++|.|+|+|.+|..+++.|.+.|+ |+++|+|++..+ +.+.|+.. .++.+.+. .+++|.+|++++.+...-
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~~d~~n~ 192 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKK-VLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLESDSETI 192 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHHTTCEEEESCTTSHHHHHHTCSTTEEEEEECCSSHHHHH
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHhCCcEEEEeCCCCHHHHHhcChhhccEEEEcCCccHHHH
Confidence 5689999999999999999999999 999999998887 77777642 22322221 168999999999775332
Q ss_pred HHhhccccccCCc-cEEEEcCC
Q 044593 104 VLKSIPFQRLKRS-TLFVDVLS 124 (335)
Q Consensus 104 vl~~l~~~~l~~~-~iVvd~~S 124 (335)
...... ..+.++ .+++-+.+
T Consensus 193 ~~~~~a-r~~~~~~~iiar~~~ 213 (336)
T 1lnq_A 193 HCILGI-RKIDESVRIIAEAER 213 (336)
T ss_dssp HHHHHH-HTTCTTSEEEEECSS
T ss_pred HHHHHH-HHHCCCCeEEEEECC
Confidence 222221 224444 55665543
No 333
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=97.10 E-value=0.00038 Score=65.40 Aligned_cols=90 Identities=17% Similarity=0.257 Sum_probs=56.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHHc-CCeEEEE-cC--CCCcHHHHH----hCCC---------------------cee--c
Q 044593 31 SLKIAVIGFGNFGQFLAKAFARH-HHTLLVH-SR--SDHSPAVRQ----QLNA---------------------PFF--A 79 (335)
Q Consensus 31 ~~kI~IIG~G~mG~siA~~L~~~-G~~V~~~-dr--~~~~~~~a~----~~g~---------------------~~~--~ 79 (335)
++||+|+|+|.||..+++.|.+. +++|+++ |+ +.+...... ..|. ... .
T Consensus 3 ~ikVgI~G~GrIGr~l~R~l~~~p~vevvaI~d~~~~~~~~~~ll~yds~~g~~~~~~v~~~~~~~l~~~g~~i~v~~~~ 82 (337)
T 3e5r_O 3 KIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTVFGIR 82 (337)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCSSEEEEEEECSSSCHHHHHHHHHCCTTTCCCCSSCEEESSSSEEEETTEEEEEECCS
T ss_pred ceEEEEECcCHHHHHHHHHHhCCCCeEEEEEECCCCCHHHHHHhhcccccCCCCCCCcEEeecCCeeEECCeEEEEEecC
Confidence 35999999999999999999876 4576544 53 222221111 1110 011 1
Q ss_pred ChhhHhh--cCCCEEEEecCchhHHHHHhhccccccCCcc--EEEEcCC
Q 044593 80 DLNDLCE--LHPDVVLLSTSILSTQSVLKSIPFQRLKRST--LFVDVLS 124 (335)
Q Consensus 80 ~~~~~~~--~~aDvVIlavp~~~~~~vl~~l~~~~l~~~~--iVvd~~S 124 (335)
+++++.+ .++|+||.|+|.....+..... ++.|. +|+|.++
T Consensus 83 dp~~l~w~~~~vDvV~eaTg~~~~~e~a~~~----l~aGak~VVIs~pa 127 (337)
T 3e5r_O 83 NPDEIPWAEAGAEYVVESTGVFTDKEKAAAH----LKGGAKKVVISAPS 127 (337)
T ss_dssp CGGGCCHHHHTCSEEEECSSSCCSHHHHTHH----HHTTCSEEEESSCC
T ss_pred ChHHccccccCCCEEEECCCchhhHHHHHHH----HHcCCCEEEEecCC
Confidence 4444311 3799999999998877766554 33455 7887764
No 334
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=97.09 E-value=0.003 Score=56.58 Aligned_cols=62 Identities=24% Similarity=0.274 Sum_probs=46.2
Q ss_pred CeEEEEcc-cHHHHHHHHHHHHc-CCeEE-EEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCchhHHHHHhhc
Q 044593 32 LKIAVIGF-GNFGQFLAKAFARH-HHTLL-VHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILSTQSVLKSI 108 (335)
Q Consensus 32 ~kI~IIG~-G~mG~siA~~L~~~-G~~V~-~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~~~~vl~~l 108 (335)
|||+|+|+ |.||..++..+.+. +++++ ++|++. ++++++..++|+||-++++....+.+...
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~---------------dl~~~~~~~~DvvIDfT~p~a~~~~~~~a 65 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGD---------------PLSLLTDGNTEVVIDFTHPDVVMGNLEFL 65 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTC---------------CTHHHHHTTCCEEEECSCTTTHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCC---------------CHHHHhccCCcEEEEccChHHHHHHHHHH
Confidence 68999996 99999999999865 88876 567642 23444313789999888888777766654
No 335
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=97.08 E-value=0.00085 Score=65.42 Aligned_cols=67 Identities=12% Similarity=0.082 Sum_probs=51.1
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCC----cHHHHHhCCCceec--ChhhHhhcC-CCEEEEec
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDH----SPAVRQQLNAPFFA--DLNDLCELH-PDVVLLST 96 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~----~~~~a~~~g~~~~~--~~~~~~~~~-aDvVIlav 96 (335)
.+++||.|||.|..|.+.|+.|.+.|++|+++|.++. ..+...+.|+.... +..+.. .+ +|+||++.
T Consensus 7 ~~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g~~~~~~~-~~~~d~vv~sp 80 (451)
T 3lk7_A 7 FENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVVCGSHPLELL-DEDFCYMIKNP 80 (451)
T ss_dssp TTTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTCEEEESCCCGGGG-GSCEEEEEECT
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCCEEEECCChHHhh-cCCCCEEEECC
Confidence 4578999999999999999999999999999999653 23445667886532 233344 55 89999964
No 336
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=97.05 E-value=0.00044 Score=60.09 Aligned_cols=67 Identities=16% Similarity=0.187 Sum_probs=48.2
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCce----ecC---hhhHhhcCCCEEEEecCch
Q 044593 31 SLKIAVIG-FGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPF----FAD---LNDLCELHPDVVLLSTSIL 99 (335)
Q Consensus 31 ~~kI~IIG-~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~----~~~---~~~~~~~~aDvVIlavp~~ 99 (335)
+|||.|.| .|.+|..++..|.+.|++|++++|++...... ..++.. ..+ ..+++ +++|+||.+....
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~-~~~d~vi~~a~~~ 78 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE-NEHLKVKKADVSSLDEVCEVC-KGADAVISAFNPG 78 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC-CTTEEEECCCTTCHHHHHHHH-TTCSEEEECCCC-
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc-cCceEEEEecCCCHHHHHHHh-cCCCEEEEeCcCC
Confidence 58999999 69999999999999999999999997543211 122221 122 33445 7899999987553
No 337
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=97.05 E-value=0.00085 Score=65.59 Aligned_cols=89 Identities=15% Similarity=0.248 Sum_probs=64.1
Q ss_pred CCeEEEEcccHHHHHHHHHHHHcC-C---eEEEEcCCCCcHHHHHhCCCce-----ecC-----hhhHhhcCCCEEEEec
Q 044593 31 SLKIAVIGFGNFGQFLAKAFARHH-H---TLLVHSRSDHSPAVRQQLNAPF-----FAD-----LNDLCELHPDVVLLST 96 (335)
Q Consensus 31 ~~kI~IIG~G~mG~siA~~L~~~G-~---~V~~~dr~~~~~~~a~~~g~~~-----~~~-----~~~~~~~~aDvVIlav 96 (335)
.+||.|||+|.||+.++..+.++. + +|++.|++....+.....|+.. ..+ +.+++ ++.|+||-+.
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~~~~~g~~~~~~~Vdadnv~~~l~aLl-~~~DvVIN~s 91 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQQYGVSFKLQQITPQNYLEVIGSTL-EENDFLIDVS 91 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHHHHHTCEEEECCCCTTTHHHHTGGGC-CTTCEEEECC
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchhhhhHHhhcCCceeEEeccchhHHHHHHHHh-cCCCEEEECC
Confidence 478999999999999999998764 4 6899998875444344445432 122 22344 4579999999
Q ss_pred CchhHHHHHhhccccccCCccEEEEcCC
Q 044593 97 SILSTQSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 97 p~~~~~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
+......+++.. +..|..++|++.
T Consensus 92 ~~~~~l~Im~ac----leaGv~YlDTa~ 115 (480)
T 2ph5_A 92 IGISSLALIILC----NQKGALYINAAT 115 (480)
T ss_dssp SSSCHHHHHHHH----HHHTCEEEESSC
T ss_pred ccccCHHHHHHH----HHcCCCEEECCC
Confidence 888877777765 346788999874
No 338
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=97.02 E-value=0.0014 Score=61.39 Aligned_cols=91 Identities=13% Similarity=0.120 Sum_probs=65.8
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCC-eEEEEcCCCCcHHHHHhCCCcee-----cChhhHhh-----cCCCEEEEecCc
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHHH-TLLVHSRSDHSPAVRQQLNAPFF-----ADLNDLCE-----LHPDVVLLSTSI 98 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G~-~V~~~dr~~~~~~~a~~~g~~~~-----~~~~~~~~-----~~aDvVIlavp~ 98 (335)
.+.+|.|+|+|.+|...+..++..|. +|++.+++++..+.++++|.... .+..+.+. ..+|+||-|+..
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~g~g~D~vid~~g~ 246 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVMDITDGNGVDVFLEFSGA 246 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTSCEEEEEECSCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCCcCHHHHHHHHcCCCCCCEEEECCCC
Confidence 56799999999999999999999999 99999999888887888887422 12222110 258999999986
Q ss_pred -hhHHHHHhhccccccCCccEEEEcCCC
Q 044593 99 -LSTQSVLKSIPFQRLKRSTLFVDVLSV 125 (335)
Q Consensus 99 -~~~~~vl~~l~~~~l~~~~iVvd~~Sv 125 (335)
..+...++.+ +++..++.+++.
T Consensus 247 ~~~~~~~~~~l-----~~~G~iv~~g~~ 269 (348)
T 2d8a_A 247 PKALEQGLQAV-----TPAGRVSLLGLY 269 (348)
T ss_dssp HHHHHHHHHHE-----EEEEEEEECCCC
T ss_pred HHHHHHHHHHH-----hcCCEEEEEccC
Confidence 3344444443 456677777654
No 339
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=97.02 E-value=0.00065 Score=64.40 Aligned_cols=90 Identities=12% Similarity=0.065 Sum_probs=59.5
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHHcC-CeEEEE-cCCCC--cHHHHHh-----------CCCcee-cChhhHhhcCCCEE
Q 044593 30 TSLKIAVIG-FGNFGQFLAKAFARHH-HTLLVH-SRSDH--SPAVRQQ-----------LNAPFF-ADLNDLCELHPDVV 92 (335)
Q Consensus 30 ~~~kI~IIG-~G~mG~siA~~L~~~G-~~V~~~-dr~~~--~~~~a~~-----------~g~~~~-~~~~~~~~~~aDvV 92 (335)
+++||+||| .|..|.-+.+.|.+.. .++..+ .++.. .....-. ...... .+.++ . .++|+|
T Consensus 6 ~~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~~~~~~-~-~~vDvv 83 (359)
T 4dpk_A 6 RTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKPTDPKL-M-DDVDII 83 (359)
T ss_dssp CCEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCEECCGGG-C-TTCCEE
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccccccccccccccceEEeCCHHH-h-cCCCEE
Confidence 457999999 6999999999887754 366443 33332 2221100 011211 23333 3 689999
Q ss_pred EEecCchhHHHHHhhccccccCCccEEEEcCCC
Q 044593 93 LLSTSILSTQSVLKSIPFQRLKRSTLFVDVLSV 125 (335)
Q Consensus 93 Ilavp~~~~~~vl~~l~~~~l~~~~iVvd~~Sv 125 (335)
|+|+|.....++...+ ++.|+.|+|+++-
T Consensus 84 f~a~p~~~s~~~a~~~----~~~G~~vIDlSa~ 112 (359)
T 4dpk_A 84 FSPLPQGAAGPVEEQF----AKEGFPVISNSPD 112 (359)
T ss_dssp EECCCTTTHHHHHHHH----HHTTCEEEECSST
T ss_pred EECCChHHHHHHHHHH----HHCCCEEEEcCCC
Confidence 9999999888877765 3578999999874
No 340
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=97.02 E-value=0.00065 Score=64.40 Aligned_cols=90 Identities=12% Similarity=0.065 Sum_probs=59.5
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHHcC-CeEEEE-cCCCC--cHHHHHh-----------CCCcee-cChhhHhhcCCCEE
Q 044593 30 TSLKIAVIG-FGNFGQFLAKAFARHH-HTLLVH-SRSDH--SPAVRQQ-----------LNAPFF-ADLNDLCELHPDVV 92 (335)
Q Consensus 30 ~~~kI~IIG-~G~mG~siA~~L~~~G-~~V~~~-dr~~~--~~~~a~~-----------~g~~~~-~~~~~~~~~~aDvV 92 (335)
+++||+||| .|..|.-+.+.|.+.. .++..+ .++.. .....-. ...... .+.++ . .++|+|
T Consensus 6 ~~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~~~~~~-~-~~vDvv 83 (359)
T 4dpl_A 6 RTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKPTDPKL-M-DDVDII 83 (359)
T ss_dssp CCEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCEECCGGG-C-TTCCEE
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccccccccccccccceEEeCCHHH-h-cCCCEE
Confidence 457999999 6999999999887754 366443 33332 2221100 011211 23333 3 689999
Q ss_pred EEecCchhHHHHHhhccccccCCccEEEEcCCC
Q 044593 93 LLSTSILSTQSVLKSIPFQRLKRSTLFVDVLSV 125 (335)
Q Consensus 93 Ilavp~~~~~~vl~~l~~~~l~~~~iVvd~~Sv 125 (335)
|+|+|.....++...+ ++.|+.|+|+++-
T Consensus 84 f~a~p~~~s~~~a~~~----~~~G~~vIDlSa~ 112 (359)
T 4dpl_A 84 FSPLPQGAAGPVEEQF----AKEGFPVISNSPD 112 (359)
T ss_dssp EECCCTTTHHHHHHHH----HHTTCEEEECSST
T ss_pred EECCChHHHHHHHHHH----HHCCCEEEEcCCC
Confidence 9999999888877765 3578999999874
No 341
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=96.99 E-value=0.0025 Score=60.12 Aligned_cols=89 Identities=15% Similarity=0.178 Sum_probs=60.0
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHHcCC-eEEEEc-CCCC--cHHHH---HhCCCcee-cChhhHhhcCCCEEEEecCchh
Q 044593 30 TSLKIAVIG-FGNFGQFLAKAFARHHH-TLLVHS-RSDH--SPAVR---QQLNAPFF-ADLNDLCELHPDVVLLSTSILS 100 (335)
Q Consensus 30 ~~~kI~IIG-~G~mG~siA~~L~~~G~-~V~~~d-r~~~--~~~~a---~~~g~~~~-~~~~~~~~~~aDvVIlavp~~~ 100 (335)
.+.||+||| .|..|.-+.+.|.+... ++..+. ++.. ..... ....+... .+.+++. .++|+||+|+|...
T Consensus 12 ~~~~V~IvGAtG~vG~ellrlL~~hP~~el~~l~S~~~aG~~~~~~~p~~~~~l~~~~~~~~~~~-~~~Dvvf~alp~~~ 90 (351)
T 1vkn_A 12 HMIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTLENSILSEFDPEKVS-KNCDVLFTALPAGA 90 (351)
T ss_dssp CCEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGCCCCBCBCCCHHHHH-HHCSEEEECCSTTH
T ss_pred ceeEEEEECCCCHHHHHHHHHHHcCCCcEEEEEeCcccccCChHHhChhhccCceEEeCCHHHhh-cCCCEEEECCCcHH
Confidence 467999999 69999999999998753 665543 2221 22210 01222221 2344554 57999999999998
Q ss_pred HHHHHhhccccccCCccEEEEcCCC
Q 044593 101 TQSVLKSIPFQRLKRSTLFVDVLSV 125 (335)
Q Consensus 101 ~~~vl~~l~~~~l~~~~iVvd~~Sv 125 (335)
..++...+ .|+.|+|.++-
T Consensus 91 s~~~~~~~------~g~~VIDlSsd 109 (351)
T 1vkn_A 91 SYDLVREL------KGVKIIDLGAD 109 (351)
T ss_dssp HHHHHTTC------CSCEEEESSST
T ss_pred HHHHHHHh------CCCEEEECChh
Confidence 88877654 58899999875
No 342
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=96.98 E-value=0.00063 Score=66.93 Aligned_cols=64 Identities=16% Similarity=0.267 Sum_probs=43.2
Q ss_pred CeEEEEcccHHHHHH--HHHHHH----c--CCeEEEEcCCCCcHHH--------HHhCCC----ceecChhhHhhcCCCE
Q 044593 32 LKIAVIGFGNFGQFL--AKAFAR----H--HHTLLVHSRSDHSPAV--------RQQLNA----PFFADLNDLCELHPDV 91 (335)
Q Consensus 32 ~kI~IIG~G~mG~si--A~~L~~----~--G~~V~~~dr~~~~~~~--------a~~~g~----~~~~~~~~~~~~~aDv 91 (335)
|||+|||.|.+|... ...+.. . +.+|+.+|.+++..+. +...|. ..++|..+++ ++||+
T Consensus 1 mKI~iIGaGs~~~t~~l~~~~~~~~~l~~~~~ei~L~Di~~~rl~~~~~~~~~~~~~~~~~~~i~~t~d~~eAl-~gAD~ 79 (477)
T 3u95_A 1 MKISIVGAGSVRFALQLVEDIAQTDELSREDTHIYLMDVHERRLNASYILARKYVEELNSPVKVVKTESLDEAI-EGADF 79 (477)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTCTTTCSTTCEEEEECSCHHHHHHHHHHHHHHHHHHTCCCEEEEESCHHHHH-TTCSE
T ss_pred CEEEEECCCchhhHHHHHHHHHhhHhcCCCCCEEEEECCCHHHHHHHHHHHHHHHHHcCCCeEEEEeCCHHHHh-CCCCE
Confidence 799999999987542 222332 1 2479999999865432 112232 3467888877 89999
Q ss_pred EEEec
Q 044593 92 VLLST 96 (335)
Q Consensus 92 VIlav 96 (335)
||++.
T Consensus 80 Vi~~~ 84 (477)
T 3u95_A 80 IINTA 84 (477)
T ss_dssp EEECC
T ss_pred EEECc
Confidence 99986
No 343
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=96.98 E-value=0.00066 Score=63.63 Aligned_cols=89 Identities=12% Similarity=0.132 Sum_probs=56.5
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHc------C--CeE-EEEcCCCCcHHH-------HH---hCCCc-eec---ChhhHh
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARH------H--HTL-LVHSRSDHSPAV-------RQ---QLNAP-FFA---DLNDLC 85 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~------G--~~V-~~~dr~~~~~~~-------a~---~~g~~-~~~---~~~~~~ 85 (335)
|+.+||+|||+|.||+.++..+.+. | ++| .++|++++..+. +. ..++. .++ +.++++
T Consensus 4 M~~irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ll 83 (331)
T 3c8m_A 4 MKTINLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADSLHSYYNERIDIGKVISYKEKGSLDSLEYESISASEAL 83 (331)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSSCEEECTTCCHHHHHHHHHTTCGGGCCSEECCHHHHH
T ss_pred CcEEeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEECChHHhhcccChHHHhhhhccCCcccccCCCCCHHHHh
Confidence 3457999999999999999999764 2 465 467888653221 11 12332 333 677765
Q ss_pred hcCCCEEEEecCch----hHHHHHhhccccccCCccEEEE
Q 044593 86 ELHPDVVLLSTSIL----STQSVLKSIPFQRLKRSTLFVD 121 (335)
Q Consensus 86 ~~~aDvVIlavp~~----~~~~vl~~l~~~~l~~~~iVvd 121 (335)
..+.|+|+.|+|.. ...+++.+. ++.|.-|+.
T Consensus 84 ~~~iDvVv~~t~~~~~~~~~~~~~~~A----L~aGkhVvt 119 (331)
T 3c8m_A 84 ARDFDIVVDATPASADGKKELAFYKET----FENGKDVVT 119 (331)
T ss_dssp HSSCSEEEECSCCCSSSHHHHHHHHHH----HHTTCEEEE
T ss_pred CCCCCEEEECCCCCCccchHHHHHHHH----HHCCCeEEe
Confidence 24799999999985 333333322 445666654
No 344
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=96.97 E-value=0.0013 Score=61.17 Aligned_cols=79 Identities=19% Similarity=0.274 Sum_probs=52.6
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHHcCCeEEEEcCCCCc----HH---HHHhCCCce----ecC---hhhHhhc--CCCE
Q 044593 29 STSLKIAVIGF-GNFGQFLAKAFARHHHTLLVHSRSDHS----PA---VRQQLNAPF----FAD---LNDLCEL--HPDV 91 (335)
Q Consensus 29 ~~~~kI~IIG~-G~mG~siA~~L~~~G~~V~~~dr~~~~----~~---~a~~~g~~~----~~~---~~~~~~~--~aDv 91 (335)
|.+|+|.|+|. |.+|+.++..|.+.|++|++++|++.. .. .....++.. ..+ +.+++ + ++|+
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~-~~~~~d~ 86 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKIL-KEHEIDI 86 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHH-HHTTCCE
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHH-hhCCCCE
Confidence 55689999995 999999999999999999999998721 11 112345532 122 23344 6 8999
Q ss_pred EEEecCchh---HHHHHhhc
Q 044593 92 VLLSTSILS---TQSVLKSI 108 (335)
Q Consensus 92 VIlavp~~~---~~~vl~~l 108 (335)
||.+..... ...+++..
T Consensus 87 Vi~~a~~~n~~~~~~l~~aa 106 (346)
T 3i6i_A 87 VVSTVGGESILDQIALVKAM 106 (346)
T ss_dssp EEECCCGGGGGGHHHHHHHH
T ss_pred EEECCchhhHHHHHHHHHHH
Confidence 999887643 34444443
No 345
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=96.95 E-value=0.00098 Score=63.35 Aligned_cols=89 Identities=16% Similarity=0.177 Sum_probs=56.6
Q ss_pred CCeEEEEc-ccHHHHHHHH-HHHHcCC---eEEEEcCCCC-c-HHHHHhCCCcee--cChhhHhhcCCCEEEEecCchhH
Q 044593 31 SLKIAVIG-FGNFGQFLAK-AFARHHH---TLLVHSRSDH-S-PAVRQQLNAPFF--ADLNDLCELHPDVVLLSTSILST 101 (335)
Q Consensus 31 ~~kI~IIG-~G~mG~siA~-~L~~~G~---~V~~~dr~~~-~-~~~a~~~g~~~~--~~~~~~~~~~aDvVIlavp~~~~ 101 (335)
|+||+|+| .|.+|..+.+ .|.+.++ +++.+..+.. . ........+... .+.+++ .++|+||.|+|....
T Consensus 1 m~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s~G~~v~~~~g~~i~~~~~~~~~~~--~~~DvVf~a~g~~~s 78 (367)
T 1t4b_A 1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDAFDLEAL--KALDIIVTCQGGDYT 78 (367)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGTCCCBCEETTCHHHH--HTCSEEEECSCHHHH
T ss_pred CcEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCCCCCCccccCCCceEEEecCChHHh--cCCCEEEECCCchhH
Confidence 46999999 8999999999 5555554 4544433221 1 110111222222 234443 689999999998888
Q ss_pred HHHHhhccccccCCcc--EEEEcCCC
Q 044593 102 QSVLKSIPFQRLKRST--LFVDVLSV 125 (335)
Q Consensus 102 ~~vl~~l~~~~l~~~~--iVvd~~Sv 125 (335)
.+....+. +.|. +|+|.++.
T Consensus 79 ~~~a~~~~----~~G~k~vVID~ss~ 100 (367)
T 1t4b_A 79 NEIYPKLR----ESGWQGYWIDAASS 100 (367)
T ss_dssp HHHHHHHH----HTTCCCEEEECSST
T ss_pred HHHHHHHH----HCCCCEEEEcCChh
Confidence 77777663 3454 89999875
No 346
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=96.94 E-value=0.0008 Score=58.40 Aligned_cols=66 Identities=15% Similarity=0.251 Sum_probs=47.5
Q ss_pred CeEEEEc-ccHHHHHHHHHHH-HcCCeEEEEcCCCC-cHHHH--HhCCCce----ecC---hhhHhhcCCCEEEEecCc
Q 044593 32 LKIAVIG-FGNFGQFLAKAFA-RHHHTLLVHSRSDH-SPAVR--QQLNAPF----FAD---LNDLCELHPDVVLLSTSI 98 (335)
Q Consensus 32 ~kI~IIG-~G~mG~siA~~L~-~~G~~V~~~dr~~~-~~~~a--~~~g~~~----~~~---~~~~~~~~aDvVIlavp~ 98 (335)
++|.|+| .|.+|..+++.|. +.|++|++++|+++ ..+.. ...++.. .++ ..+++ +++|+||.+...
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~-~~~d~vv~~ag~ 83 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAV-TNAEVVFVGAME 83 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHH-TTCSEEEESCCC
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHH-cCCCEEEEcCCC
Confidence 3499999 6999999999999 89999999999976 44322 2222221 122 23445 789999998865
No 347
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=96.92 E-value=0.00058 Score=64.87 Aligned_cols=88 Identities=15% Similarity=0.166 Sum_probs=57.5
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHHcCC---eEEEEc-CCCCcHHHHHhCCC--cee-cChhhHhhcCCCEEEEecCchhHH
Q 044593 31 SLKIAVIG-FGNFGQFLAKAFARHHH---TLLVHS-RSDHSPAVRQQLNA--PFF-ADLNDLCELHPDVVLLSTSILSTQ 102 (335)
Q Consensus 31 ~~kI~IIG-~G~mG~siA~~L~~~G~---~V~~~d-r~~~~~~~a~~~g~--~~~-~~~~~~~~~~aDvVIlavp~~~~~ 102 (335)
++||+||| .|..|.-+.+.|.+.+| ++..+. ++..-.... ..|. ... .+..+ . .++|+||+|+|.....
T Consensus 2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~~~~-~~~~~~~~~~~~~~~-~-~~~Dvvf~a~~~~~s~ 78 (366)
T 3pwk_A 2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLK-FKDQDITIEETTETA-F-EGVDIALFSAGSSTSA 78 (366)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTCEEE-ETTEEEEEEECCTTT-T-TTCSEEEECSCHHHHH
T ss_pred CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCCcce-ecCCCceEeeCCHHH-h-cCCCEEEECCChHhHH
Confidence 47999999 79999999999998766 344333 222111000 1121 111 12223 3 6899999999988877
Q ss_pred HHHhhccccccCCccEEEEcCCC
Q 044593 103 SVLKSIPFQRLKRSTLFVDVLSV 125 (335)
Q Consensus 103 ~vl~~l~~~~l~~~~iVvd~~Sv 125 (335)
+....+ ++.|+.|+|+++-
T Consensus 79 ~~a~~~----~~~G~~vIDlSa~ 97 (366)
T 3pwk_A 79 KYAPYA----VKAGVVVVDNTSY 97 (366)
T ss_dssp HHHHHH----HHTTCEEEECSST
T ss_pred HHHHHH----HHCCCEEEEcCCc
Confidence 777665 3478899999874
No 348
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=96.92 E-value=0.0017 Score=60.69 Aligned_cols=70 Identities=20% Similarity=0.303 Sum_probs=47.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHHc---------CCeE-EEEcCCCCcHH-------HHHhC-CCceec--ChhhHhh-cCC
Q 044593 31 SLKIAVIGFGNFGQFLAKAFARH---------HHTL-LVHSRSDHSPA-------VRQQL-NAPFFA--DLNDLCE-LHP 89 (335)
Q Consensus 31 ~~kI~IIG~G~mG~siA~~L~~~---------G~~V-~~~dr~~~~~~-------~a~~~-g~~~~~--~~~~~~~-~~a 89 (335)
++||+|||+|.||+.++..+.+. +.+| .++|+++...+ ..... ....++ +..+++. .+.
T Consensus 2 mirvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~id~~~~~~~~~~~~~~~~~~d~~~ll~~~~i 81 (327)
T 3do5_A 2 MIKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGDFSLVEALRMKRETGMLRDDAKAIEVVRSADY 81 (327)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESSCCHHHHHHHHHHHSSCSBCCCHHHHHHHSCC
T ss_pred cEEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccccCHHHHHhhhccCccccCCCCHHHHhcCCCC
Confidence 57999999999999999999875 4565 45688754321 11111 122333 7777752 469
Q ss_pred CEEEEecCchh
Q 044593 90 DVVLLSTSILS 100 (335)
Q Consensus 90 DvVIlavp~~~ 100 (335)
|+|+.|||...
T Consensus 82 DvVv~~tp~~~ 92 (327)
T 3do5_A 82 DVLIEASVTRV 92 (327)
T ss_dssp SEEEECCCCC-
T ss_pred CEEEECCCCcc
Confidence 99999999874
No 349
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=96.87 E-value=0.00055 Score=64.19 Aligned_cols=83 Identities=19% Similarity=0.235 Sum_probs=54.1
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHc---------CCeE-EEEcCCCCcHHHHHhCCC-ceecChhhHhhcCCCEEEEecCc
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARH---------HHTL-LVHSRSDHSPAVRQQLNA-PFFADLNDLCELHPDVVLLSTSI 98 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~---------G~~V-~~~dr~~~~~~~a~~~g~-~~~~~~~~~~~~~aDvVIlavp~ 98 (335)
+.+||+|||+|.||+.++..+.+. +.+| .++|++....+ ..+. ..++|.++++ +.|+|+.|+|.
T Consensus 2 k~irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~---~~~~~~~~~d~~~ll--~iDvVve~t~~ 76 (332)
T 2ejw_A 2 EALKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRDPRKPR---AIPQELLRAEPFDLL--EADLVVEAMGG 76 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCTTSCC---SSCGGGEESSCCCCT--TCSEEEECCCC
T ss_pred CeeEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECCHHHhh---ccCcccccCCHHHHh--CCCEEEECCCC
Confidence 357899999999999999999875 3455 56688864321 1111 2455666665 79999999997
Q ss_pred hh-HHHHHhhccccccCCccEEEE
Q 044593 99 LS-TQSVLKSIPFQRLKRSTLFVD 121 (335)
Q Consensus 99 ~~-~~~vl~~l~~~~l~~~~iVvd 121 (335)
.. ..+...+. ++.|.-|+.
T Consensus 77 ~~~a~~~~~~A----L~aGKhVVt 96 (332)
T 2ejw_A 77 VEAPLRLVLPA----LEAGIPLIT 96 (332)
T ss_dssp SHHHHHHHHHH----HHTTCCEEE
T ss_pred cHHHHHHHHHH----HHcCCeEEE
Confidence 64 33444322 334544443
No 350
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=96.87 E-value=0.00051 Score=59.57 Aligned_cols=65 Identities=15% Similarity=0.108 Sum_probs=47.3
Q ss_pred CeEEEEc-ccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCc----eecC-h---hhHhhcCCCEEEEecCch
Q 044593 32 LKIAVIG-FGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAP----FFAD-L---NDLCELHPDVVLLSTSIL 99 (335)
Q Consensus 32 ~kI~IIG-~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~----~~~~-~---~~~~~~~aDvVIlavp~~ 99 (335)
|||.|+| .|.+|..++..|.+.|++|++++|+++..... .++. ...+ . .+++ +++|+||.+....
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~-~~~d~vi~~ag~~ 74 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY--NNVKAVHFDVDWTPEEMAKQL-HGMDAIINVSGSG 74 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC--TTEEEEECCTTSCHHHHHTTT-TTCSEEEECCCCT
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc--CCceEEEecccCCHHHHHHHH-cCCCEEEECCcCC
Confidence 6899999 79999999999999999999999997543211 2222 1122 2 3344 6899999887643
No 351
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=96.84 E-value=0.0012 Score=61.77 Aligned_cols=70 Identities=14% Similarity=0.153 Sum_probs=48.5
Q ss_pred cCCCCCeEEEEc-ccHHHHHHHHHHHHc-CCeEEEEcCCCCcHHHHHh-CCCce----ec-C---hhhHhhcCCCEEEEe
Q 044593 27 VKSTSLKIAVIG-FGNFGQFLAKAFARH-HHTLLVHSRSDHSPAVRQQ-LNAPF----FA-D---LNDLCELHPDVVLLS 95 (335)
Q Consensus 27 ~~~~~~kI~IIG-~G~mG~siA~~L~~~-G~~V~~~dr~~~~~~~a~~-~g~~~----~~-~---~~~~~~~~aDvVIla 95 (335)
..+++|+|.|.| .|.+|+.++..|.+. |++|++++|++........ .++.. .. + ..+++ +++|+||-+
T Consensus 20 ~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~-~~~d~Vih~ 98 (372)
T 3slg_A 20 GSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHV-KKCDVILPL 98 (372)
T ss_dssp ---CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHH-HHCSEEEEC
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHh-ccCCEEEEc
Confidence 446788999999 699999999999998 9999999999765432222 33321 12 2 23344 679999975
Q ss_pred cC
Q 044593 96 TS 97 (335)
Q Consensus 96 vp 97 (335)
..
T Consensus 99 A~ 100 (372)
T 3slg_A 99 VA 100 (372)
T ss_dssp BC
T ss_pred Cc
Confidence 53
No 352
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=96.83 E-value=0.0041 Score=60.09 Aligned_cols=67 Identities=13% Similarity=0.148 Sum_probs=42.3
Q ss_pred CCeEEEEcccHH-HHHHHHHHHH--c---CCeEEEEcCCCCcHHHHHh-------CCCc--eecChhhHhhcCCCEEEEe
Q 044593 31 SLKIAVIGFGNF-GQFLAKAFAR--H---HHTLLVHSRSDHSPAVRQQ-------LNAP--FFADLNDLCELHPDVVLLS 95 (335)
Q Consensus 31 ~~kI~IIG~G~m-G~siA~~L~~--~---G~~V~~~dr~~~~~~~a~~-------~g~~--~~~~~~~~~~~~aDvVIla 95 (335)
.+||+|||+|.. +..+...|.. . +.+|+++|++++..+.+.. .... .++|..+.+ ++||+||++
T Consensus 2 ~~KI~IIGaG~v~~~~l~~~l~~~~~~l~~~el~L~Di~~~~~~~~~~~~~~~~~~~~~v~~t~d~~~al-~~AD~Viit 80 (417)
T 1up7_A 2 HMRIAVIGGGSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLISDTFEGAV-VDAKYVIFQ 80 (417)
T ss_dssp CCEEEEETTTCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEEECSSHHHHH-TTCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcccCCCcCEEEEEeCCHHHHHHHHHHHHHHhhCCeEEEEeCCHHHHh-CCCCEEEEc
Confidence 579999999884 2222233444 3 4589999999865432211 1122 345665666 899999999
Q ss_pred cCc
Q 044593 96 TSI 98 (335)
Q Consensus 96 vp~ 98 (335)
.-.
T Consensus 81 agv 83 (417)
T 1up7_A 81 FRP 83 (417)
T ss_dssp CCT
T ss_pred CCC
Confidence 844
No 353
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=96.82 E-value=0.0017 Score=59.83 Aligned_cols=67 Identities=25% Similarity=0.303 Sum_probs=47.7
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCce----ecC---hhhHhhcCCCEEEEecC
Q 044593 30 TSLKIAVIG-FGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPF----FAD---LNDLCELHPDVVLLSTS 97 (335)
Q Consensus 30 ~~~kI~IIG-~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~----~~~---~~~~~~~~aDvVIlavp 97 (335)
.+|+|.|.| .|.+|+.++..|.+.|++|++++|++...+.....++.. ..+ ..+++ +++|+||.+..
T Consensus 12 ~~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~-~~~d~vih~a~ 86 (342)
T 2x4g_A 12 AHVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERAL-RGLDGVIFSAG 86 (342)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHHHT-TTCSEEEEC--
T ss_pred cCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHHHH-cCCCEEEECCc
Confidence 457999999 699999999999999999999999876543222224421 122 23444 68999998764
No 354
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=96.78 E-value=0.0036 Score=59.17 Aligned_cols=91 Identities=15% Similarity=0.157 Sum_probs=66.6
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCcee---cChh---hHhhcCCCEEEEecCch-hH
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFF---ADLN---DLCELHPDVVLLSTSIL-ST 101 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~---~~~~---~~~~~~aDvVIlavp~~-~~ 101 (335)
..+.+|.|+|+|.+|...+..++..|.+|++.+++++..+.++++|.... .+.+ ++. ..+|+||-|+... .+
T Consensus 193 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~-~g~Dvvid~~g~~~~~ 271 (369)
T 1uuf_A 193 GPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHL-KSFDFILNTVAAPHNL 271 (369)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTTT-TCEEEEEECCSSCCCH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEeccccHHHHHHhh-cCCCEEEECCCCHHHH
Confidence 35689999999999999999999999999999999988888888887532 1211 122 4689999999865 35
Q ss_pred HHHHhhccccccCCccEEEEcCCC
Q 044593 102 QSVLKSIPFQRLKRSTLFVDVLSV 125 (335)
Q Consensus 102 ~~vl~~l~~~~l~~~~iVvd~~Sv 125 (335)
...++.+ +++..++.++..
T Consensus 272 ~~~~~~l-----~~~G~iv~~G~~ 290 (369)
T 1uuf_A 272 DDFTTLL-----KRDGTMTLVGAP 290 (369)
T ss_dssp HHHHTTE-----EEEEEEEECCCC
T ss_pred HHHHHHh-----ccCCEEEEeccC
Confidence 5555443 455667777643
No 355
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=96.77 E-value=0.0021 Score=58.30 Aligned_cols=68 Identities=25% Similarity=0.305 Sum_probs=48.8
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHHcCCeEEEEcCCCCcH------H---HHHhCCCce----ecC---hhhHhhcCCCEEE
Q 044593 31 SLKIAVIGF-GNFGQFLAKAFARHHHTLLVHSRSDHSP------A---VRQQLNAPF----FAD---LNDLCELHPDVVL 93 (335)
Q Consensus 31 ~~kI~IIG~-G~mG~siA~~L~~~G~~V~~~dr~~~~~------~---~a~~~g~~~----~~~---~~~~~~~~aDvVI 93 (335)
+++|.|+|. |.+|+.++..|.+.|++|++.+|++... + .....|+.. ..+ +.+++ +++|+||
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~-~~~d~vi 82 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAV-KNVDVVI 82 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHH-HTCSEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHH-cCCCEEE
Confidence 678999995 9999999999999999999999985321 1 112345532 222 23444 6899999
Q ss_pred EecCch
Q 044593 94 LSTSIL 99 (335)
Q Consensus 94 lavp~~ 99 (335)
.++...
T Consensus 83 ~~a~~~ 88 (308)
T 1qyc_A 83 STVGSL 88 (308)
T ss_dssp ECCCGG
T ss_pred ECCcch
Confidence 988753
No 356
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=96.74 E-value=0.0098 Score=56.18 Aligned_cols=91 Identities=12% Similarity=0.139 Sum_probs=63.5
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCC-eEEEEcCCCCcHHHHHhCCCceec-------ChhhHh----hcCCCEEEEec
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHH-TLLVHSRSDHSPAVRQQLNAPFFA-------DLNDLC----ELHPDVVLLST 96 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~-~V~~~dr~~~~~~~a~~~g~~~~~-------~~~~~~----~~~aDvVIlav 96 (335)
....+|.|+|+|.+|...+..++..|. +|++.|++++..+.++++|+...- +..+.+ ...+|+||-|+
T Consensus 192 ~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~D~vid~~ 271 (378)
T 3uko_A 192 EPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFECI 271 (378)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCBSEEEECS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCCCEEEECC
Confidence 356899999999999999999999998 899999999999989999875321 111211 02578888888
Q ss_pred Cchh-HHHHHhhccccccCCc-cEEEEcCC
Q 044593 97 SILS-TQSVLKSIPFQRLKRS-TLFVDVLS 124 (335)
Q Consensus 97 p~~~-~~~vl~~l~~~~l~~~-~iVvd~~S 124 (335)
.... +...++. ++++ ..++.++.
T Consensus 272 g~~~~~~~~~~~-----l~~g~G~iv~~G~ 296 (378)
T 3uko_A 272 GNVSVMRAALEC-----CHKGWGTSVIVGV 296 (378)
T ss_dssp CCHHHHHHHHHT-----BCTTTCEEEECSC
T ss_pred CCHHHHHHHHHH-----hhccCCEEEEEcc
Confidence 7643 3333333 3453 55666553
No 357
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=96.74 E-value=0.0012 Score=59.67 Aligned_cols=66 Identities=14% Similarity=0.204 Sum_probs=49.1
Q ss_pred CeEEEEc-ccHHHHHHHHHHHHc-CCeEEEEcCCCCcHHHHHhCCCce----ecC---hhhHhhcCCCEEEEecCc
Q 044593 32 LKIAVIG-FGNFGQFLAKAFARH-HHTLLVHSRSDHSPAVRQQLNAPF----FAD---LNDLCELHPDVVLLSTSI 98 (335)
Q Consensus 32 ~kI~IIG-~G~mG~siA~~L~~~-G~~V~~~dr~~~~~~~a~~~g~~~----~~~---~~~~~~~~aDvVIlavp~ 98 (335)
|||.|.| .|.+|+.++..|.+. |++|++.+|+++........++.. ..+ +.+++ +++|+||.+...
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~~~-~~~d~vi~~a~~ 75 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEAF-KGMDTVVFIPSI 75 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEEEECCTTCHHHHHHHT-TTCSEEEECCCC
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEEEEcCCCCHHHHHHHH-hCCCEEEEeCCC
Confidence 6899999 699999999999998 999999999976543333345432 122 33445 789999998764
No 358
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=96.72 E-value=0.0041 Score=58.52 Aligned_cols=67 Identities=21% Similarity=0.173 Sum_probs=47.0
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHHcCC-------eEEEEcCCCCcH--H-HHHh---CC------CceecChhhHhhcC
Q 044593 29 STSLKIAVIGF-GNFGQFLAKAFARHHH-------TLLVHSRSDHSP--A-VRQQ---LN------APFFADLNDLCELH 88 (335)
Q Consensus 29 ~~~~kI~IIG~-G~mG~siA~~L~~~G~-------~V~~~dr~~~~~--~-~a~~---~g------~~~~~~~~~~~~~~ 88 (335)
++.-||+|+|+ |.||++++..|+.... ++.++|.++... + .+.+ .. +...++..+.+ ++
T Consensus 22 ~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~~~~~a~-~~ 100 (345)
T 4h7p_A 22 MSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTADPRVAF-DG 100 (345)
T ss_dssp CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEESCHHHHT-TT
T ss_pred CCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcCChHHHh-CC
Confidence 44569999996 9999999999987643 789999986422 1 1111 11 12345666666 89
Q ss_pred CCEEEEec
Q 044593 89 PDVVLLST 96 (335)
Q Consensus 89 aDvVIlav 96 (335)
+|+||++-
T Consensus 101 advVvi~a 108 (345)
T 4h7p_A 101 VAIAIMCG 108 (345)
T ss_dssp CSEEEECC
T ss_pred CCEEEECC
Confidence 99999965
No 359
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=96.72 E-value=0.0015 Score=61.00 Aligned_cols=93 Identities=10% Similarity=0.059 Sum_probs=53.8
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHc-------CCeEE-EEcCCCCc----------HHHHHhCC-Cce-ecChhhHh-hc
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARH-------HHTLL-VHSRSDHS----------PAVRQQLN-APF-FADLNDLC-EL 87 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~-------G~~V~-~~dr~~~~----------~~~a~~~g-~~~-~~~~~~~~-~~ 87 (335)
|+..||+|||+|.||+.+++.|.+. +.+|+ ++|++... .+...+.| +.. ..+..+++ ..
T Consensus 2 Mk~irVgIiG~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~~~~~~~~~idl~~~~~~~~~~g~~~~~~~d~~e~l~~~ 81 (325)
T 3ing_A 2 MKEIRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDSRSYASGRNLDISSIISNKEKTGRISDRAFSGPEDLMGE 81 (325)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHHHHHC--CEEEEEEEECSSBEEECSSCCHHHHHHHHHHHSCSCSSBCCSGGGGTTS
T ss_pred CceEEEEEEcCcHHHHHHHHHHHhchhhccCCCEEEEEEEecChhhcccccCHHHHHHHhhhcCCCCcccCCHHHHhcCC
Confidence 4567999999999999999999874 34554 55776531 11122233 221 11445544 14
Q ss_pred CCCEEEEecCchhH-HHHHhhccccccCCccEEEEc
Q 044593 88 HPDVVLLSTSILST-QSVLKSIPFQRLKRSTLFVDV 122 (335)
Q Consensus 88 ~aDvVIlavp~~~~-~~vl~~l~~~~l~~~~iVvd~ 122 (335)
+.|+|+.|||.... ....+.+. ..++.|.-|+..
T Consensus 82 ~iDvVVe~T~~~~~~~pa~~~~~-~aL~aGkhVVta 116 (325)
T 3ing_A 82 AADLLVDCTPASRDGVREYSLYR-MAFESGMNVVTA 116 (325)
T ss_dssp CCSEEEECCCCCSSSHHHHHHHH-HHHHTTCEEEEC
T ss_pred CCCEEEECCCCccccchHHHHHH-HHHHCCCeEEEc
Confidence 68999999997532 21122121 234566666643
No 360
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=96.71 E-value=0.0036 Score=53.39 Aligned_cols=91 Identities=18% Similarity=0.185 Sum_probs=59.7
Q ss_pred CCCCeEEEEc-ccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCcee---c--Chh-hHhh----cCCCEEEEecC
Q 044593 29 STSLKIAVIG-FGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFF---A--DLN-DLCE----LHPDVVLLSTS 97 (335)
Q Consensus 29 ~~~~kI~IIG-~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~---~--~~~-~~~~----~~aDvVIlavp 97 (335)
..+++|.|+| .|.+|..++..++..|++|++++++++..+.+++.|.... . +.. .+.. ...|++|-++.
T Consensus 37 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g 116 (198)
T 1pqw_A 37 SPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLA 116 (198)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSEEEETTCSTHHHHHHHHTTTCCEEEEEECCC
T ss_pred CCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEeeCCcHHHHHHHHHHhCCCCCeEEEECCc
Confidence 3567899999 6999999999999999999999998877666766665321 1 111 1110 14678877775
Q ss_pred chhHHHHHhhccccccCCccEEEEcCC
Q 044593 98 ILSTQSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 98 ~~~~~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
.......++. ++++..++.+++
T Consensus 117 ~~~~~~~~~~-----l~~~G~~v~~g~ 138 (198)
T 1pqw_A 117 GEAIQRGVQI-----LAPGGRFIELGK 138 (198)
T ss_dssp THHHHHHHHT-----EEEEEEEEECSC
T ss_pred hHHHHHHHHH-----hccCCEEEEEcC
Confidence 4333333333 345556666654
No 361
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=96.70 E-value=0.011 Score=55.78 Aligned_cols=89 Identities=12% Similarity=0.028 Sum_probs=62.9
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCC-eEEEEcCCCCcHHHHHhCCCceec-------ChhhHhh----cCCCEEEEecC
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHHH-TLLVHSRSDHSPAVRQQLNAPFFA-------DLNDLCE----LHPDVVLLSTS 97 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G~-~V~~~dr~~~~~~~a~~~g~~~~~-------~~~~~~~----~~aDvVIlavp 97 (335)
.+.+|.|+|+|.+|...+..++..|. +|++.+++++..+.++++|+...- +..+.+. ..+|+||-|+.
T Consensus 191 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid~~g 270 (373)
T 1p0f_A 191 PGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAG 270 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCC
Confidence 46799999999999999999888998 899999999988888899875321 1222110 25799998887
Q ss_pred ch-hHHHHHhhccccccCCc-cEEEEcC
Q 044593 98 IL-STQSVLKSIPFQRLKRS-TLFVDVL 123 (335)
Q Consensus 98 ~~-~~~~vl~~l~~~~l~~~-~iVvd~~ 123 (335)
.. .+...++. ++++ ..++.++
T Consensus 271 ~~~~~~~~~~~-----l~~~~G~iv~~G 293 (373)
T 1p0f_A 271 RIETMMNALQS-----TYCGSGVTVVLG 293 (373)
T ss_dssp CHHHHHHHHHT-----BCTTTCEEEECC
T ss_pred CHHHHHHHHHH-----HhcCCCEEEEEc
Confidence 53 33444433 3455 5566665
No 362
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=96.70 E-value=0.0045 Score=58.25 Aligned_cols=90 Identities=16% Similarity=0.047 Sum_probs=62.8
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCcee-----cChhhHhh-----cCCCEEEEecCch
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFF-----ADLNDLCE-----LHPDVVLLSTSIL 99 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~-----~~~~~~~~-----~~aDvVIlavp~~ 99 (335)
.+.+|.|+|+|.+|...+..++..|.+|++.+++++..+.++++|.... .+..+.+. ..+|+||-|+...
T Consensus 189 ~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~~~g~g~D~vid~~g~~ 268 (363)
T 3uog_A 189 AGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALTGDRGADHILEIAGGA 268 (363)
T ss_dssp TTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEEEEETTSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCCCEEEcCCcccHHHHHHHHhCCCCceEEEECCChH
Confidence 4689999999999999999999999999999999888887888777422 11111110 2578888887755
Q ss_pred hHHHHHhhccccccCCccEEEEcCC
Q 044593 100 STQSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 100 ~~~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
.+...++.+ +++..++.++.
T Consensus 269 ~~~~~~~~l-----~~~G~iv~~G~ 288 (363)
T 3uog_A 269 GLGQSLKAV-----APDGRISVIGV 288 (363)
T ss_dssp CHHHHHHHE-----EEEEEEEEECC
T ss_pred HHHHHHHHh-----hcCCEEEEEec
Confidence 555555444 34455555543
No 363
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=96.67 E-value=0.0022 Score=57.55 Aligned_cols=35 Identities=26% Similarity=0.371 Sum_probs=31.7
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCC-eEEEEcCCC
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHHH-TLLVHSRSD 64 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G~-~V~~~dr~~ 64 (335)
...+|.|||+|.+|+.++..|...|. +++++|.+.
T Consensus 27 ~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 27 LDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp HTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred hcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 46799999999999999999999997 889998874
No 364
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=96.67 E-value=0.0031 Score=57.51 Aligned_cols=63 Identities=29% Similarity=0.380 Sum_probs=45.3
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCce------ecChhhHhhcCCCEEEEecC
Q 044593 31 SLKIAVIG-FGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPF------FADLNDLCELHPDVVLLSTS 97 (335)
Q Consensus 31 ~~kI~IIG-~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~------~~~~~~~~~~~aDvVIlavp 97 (335)
+|+|.|.| .|.+|+.++..|.+.|++|++.+|++.... .. ++.. ..+..+++ +++|+||.+..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~--~~~~~~~Dl~~~~~~~~~-~~~d~Vih~a~ 71 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-IN--DYEYRVSDYTLEDLINQL-NDVDAVVHLAA 71 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC--------CCEEEECCCCHHHHHHHT-TTCSEEEECCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-CC--ceEEEEccccHHHHHHhh-cCCCEEEEccc
Confidence 57999999 699999999999999999999999954433 22 3321 12233445 68999998764
No 365
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=96.67 E-value=0.013 Score=55.18 Aligned_cols=90 Identities=12% Similarity=0.016 Sum_probs=62.6
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCC-eEEEEcCCCCcHHHHHhCCCceec-------ChhhHhh----cCCCEEEEecC
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHHH-TLLVHSRSDHSPAVRQQLNAPFFA-------DLNDLCE----LHPDVVLLSTS 97 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G~-~V~~~dr~~~~~~~a~~~g~~~~~-------~~~~~~~----~~aDvVIlavp 97 (335)
.+.+|.|+|+|.+|...+..++..|. +|++.+++++..+.++++|+...- +..+.+. ..+|+||-|+.
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~~G 274 (376)
T 1e3i_A 195 PGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAG 274 (376)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcEEEccccccchHHHHHHHHhCCCccEEEECCC
Confidence 46799999999999999999999998 899999999988888888875321 1222110 25788888887
Q ss_pred ch-hHHHHHhhccccccCCc-cEEEEcCC
Q 044593 98 IL-STQSVLKSIPFQRLKRS-TLFVDVLS 124 (335)
Q Consensus 98 ~~-~~~~vl~~l~~~~l~~~-~iVvd~~S 124 (335)
.. .+...++. ++++ ..++.++.
T Consensus 275 ~~~~~~~~~~~-----l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 275 TAQTLKAAVDC-----TVLGWGSCTVVGA 298 (376)
T ss_dssp CHHHHHHHHHT-----BCTTTCEEEECCC
T ss_pred CHHHHHHHHHH-----hhcCCCEEEEECC
Confidence 53 33444433 3344 45555543
No 366
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=96.65 E-value=0.0049 Score=57.42 Aligned_cols=92 Identities=16% Similarity=0.158 Sum_probs=65.0
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceec-----ChhhHhh---cCCCEEEEecCc-h
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFA-----DLNDLCE---LHPDVVLLSTSI-L 99 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~-----~~~~~~~---~~aDvVIlavp~-~ 99 (335)
..+.+|.|+|+|.+|...+..++..|.+|++.+++++..+.++++|....- +..+.+. ..+|+||-++.. .
T Consensus 163 ~~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~d~~~~~~~~~~~~~~~~~d~vid~~g~~~ 242 (339)
T 1rjw_A 163 KPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKP 242 (339)
T ss_dssp CTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSSEEEEEESSCCHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEecCCCccHHHHHHHHhCCCCEEEECCCCHH
Confidence 356899999999999999999999999999999998888888888875321 2111110 368999998876 3
Q ss_pred hHHHHHhhccccccCCccEEEEcCCC
Q 044593 100 STQSVLKSIPFQRLKRSTLFVDVLSV 125 (335)
Q Consensus 100 ~~~~vl~~l~~~~l~~~~iVvd~~Sv 125 (335)
.+...++.+ +++..++.++..
T Consensus 243 ~~~~~~~~l-----~~~G~~v~~g~~ 263 (339)
T 1rjw_A 243 AFQSAYNSI-----RRGGACVLVGLP 263 (339)
T ss_dssp HHHHHHHHE-----EEEEEEEECCCC
T ss_pred HHHHHHHHh-----hcCCEEEEeccc
Confidence 344444433 355566666543
No 367
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=96.65 E-value=0.015 Score=54.88 Aligned_cols=90 Identities=14% Similarity=0.080 Sum_probs=63.3
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCC-eEEEEcCCCCcHHHHHhCCCceec-------ChhhHhh----cCCCEEEEecC
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHHH-TLLVHSRSDHSPAVRQQLNAPFFA-------DLNDLCE----LHPDVVLLSTS 97 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G~-~V~~~dr~~~~~~~a~~~g~~~~~-------~~~~~~~----~~aDvVIlavp 97 (335)
.+.+|.|+|+|.+|...+..++..|. +|++.+++++..+.++++|+...- +..+.+. ..+|+||-++.
T Consensus 192 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g 271 (374)
T 1cdo_A 192 PGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVG 271 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCCCCEEEECCC
Confidence 46799999999999999999999998 899999999988888888875321 1222210 25788888887
Q ss_pred ch-hHHHHHhhccccccCCc-cEEEEcCC
Q 044593 98 IL-STQSVLKSIPFQRLKRS-TLFVDVLS 124 (335)
Q Consensus 98 ~~-~~~~vl~~l~~~~l~~~-~iVvd~~S 124 (335)
.. .+...++. ++++ ..++.++.
T Consensus 272 ~~~~~~~~~~~-----l~~~~G~iv~~G~ 295 (374)
T 1cdo_A 272 NVGVMRNALES-----CLKGWGVSVLVGW 295 (374)
T ss_dssp CHHHHHHHHHT-----BCTTTCEEEECSC
T ss_pred CHHHHHHHHHH-----hhcCCcEEEEEcC
Confidence 53 33444433 3455 55666653
No 368
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=96.64 E-value=0.013 Score=55.31 Aligned_cols=89 Identities=13% Similarity=0.084 Sum_probs=61.9
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCC-eEEEEcCCCCcHHHHHhCCCceec-------ChhhHhh----cCCCEEEEecC
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHHH-TLLVHSRSDHSPAVRQQLNAPFFA-------DLNDLCE----LHPDVVLLSTS 97 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G~-~V~~~dr~~~~~~~a~~~g~~~~~-------~~~~~~~----~~aDvVIlavp 97 (335)
...+|.|+|+|.+|...+..++..|. +|++.+++++..+.++++|+...- +..+.+. ..+|+||-|+.
T Consensus 191 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g 270 (374)
T 2jhf_A 191 QGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIG 270 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEecccccchhHHHHHHHHhCCCCcEEEECCC
Confidence 46799999999999999999999998 899999999888888888875321 1222110 14788888887
Q ss_pred ch-hHHHHHhhccccccCCc-cEEEEcC
Q 044593 98 IL-STQSVLKSIPFQRLKRS-TLFVDVL 123 (335)
Q Consensus 98 ~~-~~~~vl~~l~~~~l~~~-~iVvd~~ 123 (335)
.. .+...++. ++++ ..++.++
T Consensus 271 ~~~~~~~~~~~-----l~~~~G~iv~~G 293 (374)
T 2jhf_A 271 RLDTMVTALSC-----CQEAYGVSVIVG 293 (374)
T ss_dssp CHHHHHHHHHH-----BCTTTCEEEECS
T ss_pred CHHHHHHHHHH-----hhcCCcEEEEec
Confidence 53 33444433 3344 4555554
No 369
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=96.63 E-value=0.0021 Score=58.35 Aligned_cols=67 Identities=19% Similarity=0.253 Sum_probs=48.5
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHHcCCeEEEEcCCC-------CcHHH---HHhCCCce----ecC---hhhHhhcCCCEE
Q 044593 31 SLKIAVIG-FGNFGQFLAKAFARHHHTLLVHSRSD-------HSPAV---RQQLNAPF----FAD---LNDLCELHPDVV 92 (335)
Q Consensus 31 ~~kI~IIG-~G~mG~siA~~L~~~G~~V~~~dr~~-------~~~~~---a~~~g~~~----~~~---~~~~~~~~aDvV 92 (335)
+++|.|+| .|.+|+.++..|.+.|++|++.+|++ +..+. ....|+.. ..+ +.+++ +++|+|
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~-~~~d~v 80 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAI-KQVDIV 80 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHH-TTCSEE
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHH-hCCCEE
Confidence 57899999 59999999999999999999999986 22211 12345532 122 23445 689999
Q ss_pred EEecCc
Q 044593 93 LLSTSI 98 (335)
Q Consensus 93 Ilavp~ 98 (335)
|.+...
T Consensus 81 i~~a~~ 86 (307)
T 2gas_A 81 ICAAGR 86 (307)
T ss_dssp EECSSS
T ss_pred EECCcc
Confidence 998874
No 370
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=96.62 E-value=0.0032 Score=62.06 Aligned_cols=64 Identities=20% Similarity=0.251 Sum_probs=49.8
Q ss_pred CCCeEEEEcccHHHHH-HHHHHHHcCCeEEEEcCCCCc-HHHHHhCCCceec--ChhhHhhcCCCEEEEe
Q 044593 30 TSLKIAVIGFGNFGQF-LAKAFARHHHTLLVHSRSDHS-PAVRQQLNAPFFA--DLNDLCELHPDVVLLS 95 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~s-iA~~L~~~G~~V~~~dr~~~~-~~~a~~~g~~~~~--~~~~~~~~~aDvVIla 95 (335)
..++|.|||.|..|.+ +|+.|.+.|++|+++|.++.. .+..++.|+.+.. +.+. + .++|+||++
T Consensus 21 ~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~g~~~~~-~-~~~d~vV~S 88 (494)
T 4hv4_A 21 RVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNSVTQHLTALGAQIYFHHRPEN-V-LDASVVVVS 88 (494)
T ss_dssp -CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCEEESSCCGGG-G-TTCSEEEEC
T ss_pred cCCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHCCCEEECCCCHHH-c-CCCCEEEEC
Confidence 4689999999999996 899999999999999987653 3446677886532 3333 3 679999986
No 371
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=96.61 E-value=0.0021 Score=64.33 Aligned_cols=91 Identities=15% Similarity=0.100 Sum_probs=61.2
Q ss_pred CeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCc-eecC---hhhHhhcCCCEEEEecCchhHHHHHhh
Q 044593 32 LKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAP-FFAD---LNDLCELHPDVVLLSTSILSTQSVLKS 107 (335)
Q Consensus 32 ~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~-~~~~---~~~~~~~~aDvVIlavp~~~~~~vl~~ 107 (335)
++|.|+|+|.+|..+|+.|.+.|++|+++|.|++..+.+. .-+. ..++ +.++-.+++|.+|++++.+...-.+..
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~-~~i~gD~t~~~~L~~agi~~ad~vi~~~~~d~~ni~~~~ 427 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESPVCNDH-VVVYGDATVGQTLRQAGIDRASGIIVTTNDDSTNIFLTL 427 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCSSCCSS-CEEESCSSSSTHHHHHTTTSCSEEEECCSCHHHHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHHHhhcC-CEEEeCCCCHHHHHhcCccccCEEEEECCCchHHHHHHH
Confidence 8999999999999999999999999999999998654322 1000 1122 222212789999999998864433333
Q ss_pred ccccccCCc-cEEEEcCC
Q 044593 108 IPFQRLKRS-TLFVDVLS 124 (335)
Q Consensus 108 l~~~~l~~~-~iVvd~~S 124 (335)
+. ..+.+. .+|+-+.+
T Consensus 428 ~a-k~l~~~~~iiar~~~ 444 (565)
T 4gx0_A 428 AC-RHLHSHIRIVARANG 444 (565)
T ss_dssp HH-HHHCSSSEEEEEESS
T ss_pred HH-HHHCCCCEEEEEECC
Confidence 32 234454 45555543
No 372
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=96.61 E-value=0.0057 Score=57.64 Aligned_cols=90 Identities=17% Similarity=0.162 Sum_probs=65.1
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHH-hCCCcee---cChh---hHhhcCCCEEEEecCch-hH
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQ-QLNAPFF---ADLN---DLCELHPDVVLLSTSIL-ST 101 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~-~~g~~~~---~~~~---~~~~~~aDvVIlavp~~-~~ 101 (335)
.+.+|.|+|+|.+|...+..++..|.+|++++++++..+.+. ++|.... .+.+ ++. ..+|+||-++... .+
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~-~~~D~vid~~g~~~~~ 265 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQAAA-GTLDGIIDTVSAVHPL 265 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEETTCHHHHHHTT-TCEEEEEECCSSCCCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEeccCHHHHHHhh-CCCCEEEECCCcHHHH
Confidence 567999999999999999999999999999999988877666 7786422 2222 222 4689999998765 35
Q ss_pred HHHHhhccccccCCccEEEEcCCC
Q 044593 102 QSVLKSIPFQRLKRSTLFVDVLSV 125 (335)
Q Consensus 102 ~~vl~~l~~~~l~~~~iVvd~~Sv 125 (335)
...++.+ +++..++.+++.
T Consensus 266 ~~~~~~l-----~~~G~iv~~g~~ 284 (366)
T 1yqd_A 266 LPLFGLL-----KSHGKLILVGAP 284 (366)
T ss_dssp HHHHHHE-----EEEEEEEECCCC
T ss_pred HHHHHHH-----hcCCEEEEEccC
Confidence 5555444 345566777643
No 373
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=96.59 E-value=0.0047 Score=55.94 Aligned_cols=67 Identities=16% Similarity=0.122 Sum_probs=49.6
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHHcC-CeEEEEcCCCCcHH--HHHhCCCce----ecC---hhhHhhcCCCEEEEecCc
Q 044593 31 SLKIAVIGF-GNFGQFLAKAFARHH-HTLLVHSRSDHSPA--VRQQLNAPF----FAD---LNDLCELHPDVVLLSTSI 98 (335)
Q Consensus 31 ~~kI~IIG~-G~mG~siA~~L~~~G-~~V~~~dr~~~~~~--~a~~~g~~~----~~~---~~~~~~~~aDvVIlavp~ 98 (335)
+|+|.|.|. |.+|+.++..|.+.| ++|.+.+|++.... .....++.. ..+ +.+++ +++|+||.+...
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~-~~~d~vi~~a~~ 82 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELAL-NGAYATFIVTNY 82 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHH-TTCSEEEECCCH
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHH-hcCCEEEEeCCC
Confidence 578999995 999999999999998 99999999986532 223345532 223 23445 689999998763
No 374
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=96.59 E-value=0.0041 Score=58.40 Aligned_cols=92 Identities=16% Similarity=0.184 Sum_probs=66.0
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceec------ChhhHhhcCCCEEEEecCc---h
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFA------DLNDLCELHPDVVLLSTSI---L 99 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~------~~~~~~~~~aDvVIlavp~---~ 99 (335)
..+.+|.|+|+|.+|...+..++..|.+|++++++++..+.++++|....- +..+.+...+|+||-|+.. .
T Consensus 178 ~~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~D~vid~~g~~~~~ 257 (360)
T 1piw_A 178 GPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCASSLTDI 257 (360)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHHHSCSCEEEEEECCSCSTTC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCCEEEcCcCchHHHHHhhcCCCEEEECCCCCcHH
Confidence 356899999999999999999999999999999999888888888875321 2212111368999999886 3
Q ss_pred hHHHHHhhccccccCCccEEEEcCCC
Q 044593 100 STQSVLKSIPFQRLKRSTLFVDVLSV 125 (335)
Q Consensus 100 ~~~~vl~~l~~~~l~~~~iVvd~~Sv 125 (335)
.....++ .++++..++.++..
T Consensus 258 ~~~~~~~-----~l~~~G~iv~~g~~ 278 (360)
T 1piw_A 258 DFNIMPK-----AMKVGGRIVSISIP 278 (360)
T ss_dssp CTTTGGG-----GEEEEEEEEECCCC
T ss_pred HHHHHHH-----HhcCCCEEEEecCC
Confidence 3333332 35566677777643
No 375
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=96.57 E-value=0.0023 Score=56.02 Aligned_cols=70 Identities=14% Similarity=0.116 Sum_probs=49.4
Q ss_pred CCCCeEEEEc-ccHHHHHHHHHHHHcCC--eEEEEcCCCCcHHHHHhCCCc-------eecChhhHhhcCCCEEEEecCc
Q 044593 29 STSLKIAVIG-FGNFGQFLAKAFARHHH--TLLVHSRSDHSPAVRQQLNAP-------FFADLNDLCELHPDVVLLSTSI 98 (335)
Q Consensus 29 ~~~~kI~IIG-~G~mG~siA~~L~~~G~--~V~~~dr~~~~~~~a~~~g~~-------~~~~~~~~~~~~aDvVIlavp~ 98 (335)
+++|+|.|.| .|.+|..++..|.+.|+ +|++++|+++........++. ...+..+++ +++|+||.+...
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~-~~~d~vi~~ag~ 94 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAF-QGHDVGFCCLGT 94 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGG-SSCSEEEECCCC
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCceEEecCcCCHHHHHHHh-cCCCEEEECCCc
Confidence 4568999999 69999999999999999 999999987543211111221 112233444 689999998764
Q ss_pred h
Q 044593 99 L 99 (335)
Q Consensus 99 ~ 99 (335)
.
T Consensus 95 ~ 95 (242)
T 2bka_A 95 T 95 (242)
T ss_dssp C
T ss_pred c
Confidence 3
No 376
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=96.56 E-value=0.0027 Score=58.17 Aligned_cols=78 Identities=18% Similarity=0.313 Sum_probs=52.6
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHHcCCeEEEEcCCC-C-----cHHH---HHhCCCce----ecC---hhhHhhcCCCEE
Q 044593 30 TSLKIAVIG-FGNFGQFLAKAFARHHHTLLVHSRSD-H-----SPAV---RQQLNAPF----FAD---LNDLCELHPDVV 92 (335)
Q Consensus 30 ~~~kI~IIG-~G~mG~siA~~L~~~G~~V~~~dr~~-~-----~~~~---a~~~g~~~----~~~---~~~~~~~~aDvV 92 (335)
++|+|.|+| .|.+|+.++..|.+.|++|++.+|++ . ..+. ....++.. ..+ +.+++ +++|+|
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~-~~~d~v 81 (321)
T 3c1o_A 3 HMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVL-KQVDIV 81 (321)
T ss_dssp -CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHH-TTCSEE
T ss_pred cccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHH-cCCCEE
Confidence 467899999 59999999999999999999999986 2 1111 12345532 222 33445 689999
Q ss_pred EEecCch---hHHHHHhhc
Q 044593 93 LLSTSIL---STQSVLKSI 108 (335)
Q Consensus 93 Ilavp~~---~~~~vl~~l 108 (335)
|.++... ....+++..
T Consensus 82 i~~a~~~~~~~~~~l~~aa 100 (321)
T 3c1o_A 82 ISALPFPMISSQIHIINAI 100 (321)
T ss_dssp EECCCGGGSGGGHHHHHHH
T ss_pred EECCCccchhhHHHHHHHH
Confidence 9987643 234444443
No 377
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=96.55 E-value=0.0038 Score=57.12 Aligned_cols=67 Identities=25% Similarity=0.362 Sum_probs=49.1
Q ss_pred CeEEEEc-ccHHHHHHHHHHHHcCCeEEEEcCCCC-cHHH---HHhCCCce----ecC---hhhHhhcCCCEEEEecCch
Q 044593 32 LKIAVIG-FGNFGQFLAKAFARHHHTLLVHSRSDH-SPAV---RQQLNAPF----FAD---LNDLCELHPDVVLLSTSIL 99 (335)
Q Consensus 32 ~kI~IIG-~G~mG~siA~~L~~~G~~V~~~dr~~~-~~~~---a~~~g~~~----~~~---~~~~~~~~aDvVIlavp~~ 99 (335)
++|.|+| .|.+|+.++..|.+.|++|++.+|++. ..+. ....|+.. ..+ +..++ +++|+||.+++..
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~-~~~d~vi~~a~~~ 90 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELM-KKVDVVISALAFP 90 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHH-TTCSEEEECCCGG
T ss_pred CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHH-cCCCEEEECCchh
Confidence 5899999 599999999999999999999999874 3321 12345542 122 33445 6899999988743
No 378
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=96.54 E-value=0.0023 Score=58.21 Aligned_cols=67 Identities=24% Similarity=0.283 Sum_probs=48.3
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHHcCCeEEEEcCCCCc-----HHH---HHhCCCce----ecC---hhhHhhcCCCEEEE
Q 044593 31 SLKIAVIG-FGNFGQFLAKAFARHHHTLLVHSRSDHS-----PAV---RQQLNAPF----FAD---LNDLCELHPDVVLL 94 (335)
Q Consensus 31 ~~kI~IIG-~G~mG~siA~~L~~~G~~V~~~dr~~~~-----~~~---a~~~g~~~----~~~---~~~~~~~~aDvVIl 94 (335)
+|+|.|+| .|.+|+.++..|.+.|++|++.+|++.. .+. ....++.. ..+ +.+++ +++|+||.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~-~~~d~vi~ 82 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDAL-KQVDVVIS 82 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHH-TTCSEEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHH-hCCCEEEE
Confidence 67899999 5999999999999999999999998532 111 12345432 223 33445 68999999
Q ss_pred ecCc
Q 044593 95 STSI 98 (335)
Q Consensus 95 avp~ 98 (335)
++..
T Consensus 83 ~a~~ 86 (313)
T 1qyd_A 83 ALAG 86 (313)
T ss_dssp CCCC
T ss_pred CCcc
Confidence 8764
No 379
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=96.54 E-value=0.002 Score=61.04 Aligned_cols=54 Identities=17% Similarity=0.218 Sum_probs=34.4
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcC----CeE-EEEcCCCCcHHHHHhC-CCceecChhhHh
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHH----HTL-LVHSRSDHSPAVRQQL-NAPFFADLNDLC 85 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G----~~V-~~~dr~~~~~~~a~~~-g~~~~~~~~~~~ 85 (335)
+++||+|||+|.||+.++..+.+.. .+| .++|++... .+.+. |+..+++..+++
T Consensus 3 k~i~vgIiG~G~VG~~~~~~l~~~~~g~~~~vvaV~d~~~~~--~~~~~~gi~~~~~~~e~l 62 (358)
T 1ebf_A 3 KVVNVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEAERSL--ISKDFSPLNVGSDWKAAL 62 (358)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECSSBEE--ECSSCSCCSCTTCHHHHH
T ss_pred ceEEEEEEecCHHHHHHHHHHHhcCCCCCEEEEEEEECChhh--hccccCCCCccccHHHHH
Confidence 4579999999999999999998863 455 445654321 11222 554434555544
No 380
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=96.54 E-value=0.014 Score=54.99 Aligned_cols=90 Identities=12% Similarity=0.060 Sum_probs=62.5
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCC-eEEEEcCCCCcHHHHHhCCCceec-------ChhhHhh----cCCCEEEEecC
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHHH-TLLVHSRSDHSPAVRQQLNAPFFA-------DLNDLCE----LHPDVVLLSTS 97 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G~-~V~~~dr~~~~~~~a~~~g~~~~~-------~~~~~~~----~~aDvVIlavp 97 (335)
.+.+|.|+|+|.+|...+..++..|. +|++.+++++..+.++++|+...- +..+.+. ..+|+||-|+.
T Consensus 190 ~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~D~vid~~g 269 (373)
T 2fzw_A 190 PGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIG 269 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEeccccccccHHHHHHHHhCCCCCEEEECCC
Confidence 46799999999999999999998998 899999999888888888875221 1222110 15788888887
Q ss_pred ch-hHHHHHhhccccccCCc-cEEEEcCC
Q 044593 98 IL-STQSVLKSIPFQRLKRS-TLFVDVLS 124 (335)
Q Consensus 98 ~~-~~~~vl~~l~~~~l~~~-~iVvd~~S 124 (335)
.. .+...++. ++++ ..++.++.
T Consensus 270 ~~~~~~~~~~~-----l~~~~G~iv~~G~ 293 (373)
T 2fzw_A 270 NVKVMRAALEA-----CHKGWGVSVVVGV 293 (373)
T ss_dssp CHHHHHHHHHT-----BCTTTCEEEECSC
T ss_pred cHHHHHHHHHh-----hccCCcEEEEEec
Confidence 53 33444433 3455 55666553
No 381
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=96.52 E-value=0.0095 Score=54.71 Aligned_cols=76 Identities=16% Similarity=0.205 Sum_probs=59.6
Q ss_pred CCCCeEEEEc-ccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCchhHHHHHhh
Q 044593 29 STSLKIAVIG-FGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILSTQSVLKS 107 (335)
Q Consensus 29 ~~~~kI~IIG-~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~~~~vl~~ 107 (335)
..++++.||| ...+|.-+|..|.+.+..|+++.... .++.+.+ ++||+||.|+.-...
T Consensus 177 l~Gk~vvViGRS~iVGkPla~LL~~~~ATVTi~Hs~T--------------~dl~~~~-~~ADIvV~A~G~p~~------ 235 (303)
T 4b4u_A 177 IAGKHAVVVGRSAILGKPMAMMLLQANATVTICHSRT--------------QNLPELV-KQADIIVGAVGKAEL------ 235 (303)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC--------------SSHHHHH-HTCSEEEECSCSTTC------
T ss_pred CCCCEEEEEeccccccchHHHHHHhcCCEEEEecCCC--------------CCHHHHh-hcCCeEEeccCCCCc------
Confidence 4678999999 67889999999999999999886543 2445566 799999999875432
Q ss_pred ccccccCCccEEEEcCCC
Q 044593 108 IPFQRLKRSTLFVDVLSV 125 (335)
Q Consensus 108 l~~~~l~~~~iVvd~~Sv 125 (335)
+....+++|++|+|++..
T Consensus 236 i~~d~vk~GavVIDVGin 253 (303)
T 4b4u_A 236 IQKDWIKQGAVVVDAGFH 253 (303)
T ss_dssp BCGGGSCTTCEEEECCCB
T ss_pred cccccccCCCEEEEecee
Confidence 223568999999999753
No 382
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=96.52 E-value=0.0061 Score=55.68 Aligned_cols=88 Identities=16% Similarity=0.050 Sum_probs=62.7
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecCh---h---hHhhcCCCEEEEecCchhHH
Q 044593 30 TSLKIAVIGF-GNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADL---N---DLCELHPDVVLLSTSILSTQ 102 (335)
Q Consensus 30 ~~~kI~IIG~-G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~---~---~~~~~~aDvVIlavp~~~~~ 102 (335)
.+.+|.|+|+ |.+|...+..++..|.+|++.+++++..+.++++|....-+. . +.+ ..+|+||- +......
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~-~~~d~vid-~g~~~~~ 202 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAATYAEVPERAKAW-GGLDLVLE-VRGKEVE 202 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHT-TSEEEEEE-CSCTTHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEECCcchhHHHHh-cCceEEEE-CCHHHHH
Confidence 5679999997 999999999999999999999999888777888887532111 1 222 46899998 7765555
Q ss_pred HHHhhccccccCCccEEEEcCC
Q 044593 103 SVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 103 ~vl~~l~~~~l~~~~iVvd~~S 124 (335)
..++.+ +++..++.++.
T Consensus 203 ~~~~~l-----~~~G~~v~~g~ 219 (302)
T 1iz0_A 203 ESLGLL-----AHGGRLVYIGA 219 (302)
T ss_dssp HHHTTE-----EEEEEEEEC--
T ss_pred HHHHhh-----ccCCEEEEEeC
Confidence 544433 34556666654
No 383
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=96.52 E-value=0.0092 Score=55.90 Aligned_cols=91 Identities=15% Similarity=0.152 Sum_probs=64.5
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCC-eEEEEcCCCCcHHHHHhCCCcee-c-C---hhhHh----h---cCCCEEEEe
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHH-TLLVHSRSDHSPAVRQQLNAPFF-A-D---LNDLC----E---LHPDVVLLS 95 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~-~V~~~dr~~~~~~~a~~~g~~~~-~-~---~~~~~----~---~~aDvVIla 95 (335)
..+.+|.|+|+|.+|...+..++..|. +|++.+++++..+.++++|.... + + ..+.. . ..+|+||-+
T Consensus 170 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~g~D~vid~ 249 (356)
T 1pl8_A 170 TLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIEC 249 (356)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEEC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhCCCCCEEEEC
Confidence 356899999999999999999998998 89999999888888888887521 1 1 11111 0 258999999
Q ss_pred cCchh-HHHHHhhccccccCCccEEEEcCC
Q 044593 96 TSILS-TQSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 96 vp~~~-~~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
+.... +...++. ++++..++.++.
T Consensus 250 ~g~~~~~~~~~~~-----l~~~G~iv~~G~ 274 (356)
T 1pl8_A 250 TGAEASIQAGIYA-----TRSGGTLVLVGL 274 (356)
T ss_dssp SCCHHHHHHHHHH-----SCTTCEEEECSC
T ss_pred CCChHHHHHHHHH-----hcCCCEEEEEec
Confidence 87653 3444443 345556666653
No 384
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=96.51 E-value=0.0058 Score=60.67 Aligned_cols=65 Identities=17% Similarity=0.092 Sum_probs=49.5
Q ss_pred CCCeEEEEcccHHHHH-HHHHHHHcCCeEEEEcCCCC--cHHHHHhCCCceec--ChhhHhhcCCCEEEEe
Q 044593 30 TSLKIAVIGFGNFGQF-LAKAFARHHHTLLVHSRSDH--SPAVRQQLNAPFFA--DLNDLCELHPDVVLLS 95 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~s-iA~~L~~~G~~V~~~dr~~~--~~~~a~~~g~~~~~--~~~~~~~~~aDvVIla 95 (335)
+.++|.|||.|..|.+ +|+.|.+.|++|+++|.++. ..+..++.|+.+.. +...+. .++|+||++
T Consensus 18 ~~~~i~~iGiGg~Gms~lA~~l~~~G~~V~~sD~~~~~~~~~~L~~~gi~~~~G~~~~~~~-~~~d~vV~S 87 (524)
T 3hn7_A 18 QGMHIHILGICGTFMGSLALLARALGHTVTGSDANIYPPMSTQLEQAGVTIEEGYLIAHLQ-PAPDLVVVG 87 (524)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCCTTHHHHHHHTTCEEEESCCGGGGC-SCCSEEEEC
T ss_pred cCCEEEEEEecHhhHHHHHHHHHhCCCEEEEECCCCCcHHHHHHHHCCCEEECCCCHHHcC-CCCCEEEEC
Confidence 3689999999999997 79999999999999998753 34456677886542 334443 579999985
No 385
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=96.50 E-value=0.0028 Score=59.59 Aligned_cols=35 Identities=26% Similarity=0.439 Sum_probs=32.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCC
Q 044593 31 SLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDH 65 (335)
Q Consensus 31 ~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~ 65 (335)
.|||.|||.|..|.++|..|+++|++|+++++++.
T Consensus 1 sm~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~ 35 (412)
T 4hb9_A 1 SMHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSA 35 (412)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCS
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 37999999999999999999999999999998753
No 386
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=96.49 E-value=0.0048 Score=56.62 Aligned_cols=38 Identities=16% Similarity=0.176 Sum_probs=34.0
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHHcCCeEEEEcCCCCc
Q 044593 29 STSLKIAVIGF-GNFGQFLAKAFARHHHTLLVHSRSDHS 66 (335)
Q Consensus 29 ~~~~kI~IIG~-G~mG~siA~~L~~~G~~V~~~dr~~~~ 66 (335)
+++|+|.|.|. |.+|+.++..|.+.|++|++++|++..
T Consensus 9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 47 (342)
T 1y1p_A 9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASK 47 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHH
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCccc
Confidence 46789999995 999999999999999999999998654
No 387
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=96.49 E-value=0.006 Score=56.87 Aligned_cols=90 Identities=16% Similarity=0.202 Sum_probs=63.8
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHc--CCeEEEEcCCCCcHHHHHhCCCceecChh-------hHhh-cCCCEEEEecCch
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARH--HHTLLVHSRSDHSPAVRQQLNAPFFADLN-------DLCE-LHPDVVLLSTSIL 99 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~--G~~V~~~dr~~~~~~~a~~~g~~~~~~~~-------~~~~-~~aDvVIlavp~~ 99 (335)
.+.+|.|+|+|.+|...+..++.. |.+|++.+++++..+.++++|....-+.. ++.. ..+|+||-|+...
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~g~g~D~vid~~g~~ 249 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSEMKDAESLINKLTDGLGASIAIDLVGTE 249 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSEEECHHHHHHHHHHHHTTCCEEEEEESSCCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCEEeccccchHHHHHhhcCCCccEEEECCCCh
Confidence 578999999999999999999988 99999999998888888888875322211 1110 1579999888765
Q ss_pred -hHHHHHhhccccccCCccEEEEcCC
Q 044593 100 -STQSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 100 -~~~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
.+...++.+ +++..++.++.
T Consensus 250 ~~~~~~~~~l-----~~~G~iv~~g~ 270 (344)
T 2h6e_A 250 ETTYNLGKLL-----AQEGAIILVGM 270 (344)
T ss_dssp HHHHHHHHHE-----EEEEEEEECCC
T ss_pred HHHHHHHHHh-----hcCCEEEEeCC
Confidence 344444433 34555666653
No 388
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=96.48 E-value=0.0027 Score=59.69 Aligned_cols=88 Identities=15% Similarity=0.185 Sum_probs=57.4
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHHcCC---eEEEEc-CCCCcHHHHHhCCC--cee-cChhhHhhcCCCEEEEecCchhHH
Q 044593 31 SLKIAVIG-FGNFGQFLAKAFARHHH---TLLVHS-RSDHSPAVRQQLNA--PFF-ADLNDLCELHPDVVLLSTSILSTQ 102 (335)
Q Consensus 31 ~~kI~IIG-~G~mG~siA~~L~~~G~---~V~~~d-r~~~~~~~a~~~g~--~~~-~~~~~~~~~~aDvVIlavp~~~~~ 102 (335)
++||+||| .|..|.-+.+.|.++.| ++..+. ++..-.... -.|. ... .+..+ . .++|+||+|+|.....
T Consensus 1 ~~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~~~aG~~~~-~~~~~~~~~~~~~~~-~-~~~Dvvf~a~~~~~s~ 77 (344)
T 3tz6_A 1 GLSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASARSQGRKLA-FRGQEIEVEDAETAD-P-SGLDIALFSAGSAMSK 77 (344)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTSSCEEE-ETTEEEEEEETTTSC-C-TTCSEEEECSCHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECcccCCCcee-ecCCceEEEeCCHHH-h-ccCCEEEECCChHHHH
Confidence 36899999 79999999999998754 454443 222111100 1111 111 12222 3 6899999999998888
Q ss_pred HHHhhccccccCCccEEEEcCCC
Q 044593 103 SVLKSIPFQRLKRSTLFVDVLSV 125 (335)
Q Consensus 103 ~vl~~l~~~~l~~~~iVvd~~Sv 125 (335)
+....+ ++.|+.|+|.++-
T Consensus 78 ~~a~~~----~~~G~~vID~Sa~ 96 (344)
T 3tz6_A 78 VQAPRF----AAAGVTVIDNSSA 96 (344)
T ss_dssp HHHHHH----HHTTCEEEECSST
T ss_pred HHHHHH----HhCCCEEEECCCc
Confidence 777765 3468899999874
No 389
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=96.48 E-value=0.0064 Score=57.24 Aligned_cols=89 Identities=17% Similarity=0.188 Sum_probs=62.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCC---CcHHHHHhCCCceec--Ch-hhHh--hcCCCEEEEecCchh-H
Q 044593 31 SLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSD---HSPAVRQQLNAPFFA--DL-NDLC--ELHPDVVLLSTSILS-T 101 (335)
Q Consensus 31 ~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~---~~~~~a~~~g~~~~~--~~-~~~~--~~~aDvVIlavp~~~-~ 101 (335)
+.+|.|+|+|.+|...+..++..|.+|++.++++ +..+.++++|+...+ +. +++. ...+|+||-++.... +
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~ 260 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYYNSSNGYDKLKDSVGKFDVIIDATGADVNI 260 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTCEEEECTTCSHHHHHHHCCEEEEEECCCCCTHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCCceechHHHHHHHHHhCCCCCEEEECCCChHHH
Confidence 7899999999999999999999999999999998 777777777765331 11 1111 025899999887653 3
Q ss_pred -HHHHhhccccccCCccEEEEcCC
Q 044593 102 -QSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 102 -~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
...++. ++++..++.++.
T Consensus 261 ~~~~~~~-----l~~~G~iv~~g~ 279 (366)
T 2cdc_A 261 LGNVIPL-----LGRNGVLGLFGF 279 (366)
T ss_dssp HHHHGGG-----EEEEEEEEECSC
T ss_pred HHHHHHH-----HhcCCEEEEEec
Confidence 444433 345556666654
No 390
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=96.47 E-value=0.0038 Score=58.85 Aligned_cols=68 Identities=16% Similarity=0.220 Sum_probs=48.4
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCce----ecC---hhhHhhcCCCEEEEecC
Q 044593 29 STSLKIAVIGF-GNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPF----FAD---LNDLCELHPDVVLLSTS 97 (335)
Q Consensus 29 ~~~~kI~IIG~-G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~----~~~---~~~~~~~~aDvVIlavp 97 (335)
.++|+|.|.|. |.+|..++..|.+.|++|++++|++.........++.. ..+ ..+++ +++|+||.+..
T Consensus 27 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~-~~~d~Vih~A~ 102 (379)
T 2c5a_A 27 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVT-EGVDHVFNLAA 102 (379)
T ss_dssp TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHH-TTCSEEEECCC
T ss_pred ccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhccCCceEEECCCCCHHHHHHHh-CCCCEEEECce
Confidence 35789999995 99999999999999999999999875432112223321 122 23445 68999998764
No 391
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=96.46 E-value=0.0036 Score=54.77 Aligned_cols=67 Identities=21% Similarity=0.171 Sum_probs=47.9
Q ss_pred CCCCeEEEEc-ccHHHHHHHHHHHHc--CCeEEEEcCCCCcHHHHHhCCCce----ecC---hhhHhhcCCCEEEEecC
Q 044593 29 STSLKIAVIG-FGNFGQFLAKAFARH--HHTLLVHSRSDHSPAVRQQLNAPF----FAD---LNDLCELHPDVVLLSTS 97 (335)
Q Consensus 29 ~~~~kI~IIG-~G~mG~siA~~L~~~--G~~V~~~dr~~~~~~~a~~~g~~~----~~~---~~~~~~~~aDvVIlavp 97 (335)
+++++|.|.| .|.+|..+++.|.+. |++|++.+|++...+.. ..++.. .++ ..+++ +++|+||.+..
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~-~~~d~vi~~a~ 78 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-GGEADVFIGDITDADSINPAF-QGIDALVILTS 78 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-TCCTTEEECCTTSHHHHHHHH-TTCSEEEECCC
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-CCCeeEEEecCCCHHHHHHHH-cCCCEEEEecc
Confidence 3578999999 699999999999999 89999999986543311 223321 122 33445 68999998764
No 392
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=96.46 E-value=0.014 Score=56.64 Aligned_cols=113 Identities=11% Similarity=0.090 Sum_probs=72.0
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCC---eEEEEc----CC----CC-c---HH-----HHHhCCCc-eecChhhHhhc
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHH---TLLVHS----RS----DH-S---PA-----VRQQLNAP-FFADLNDLCEL 87 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~---~V~~~d----r~----~~-~---~~-----~a~~~g~~-~~~~~~~~~~~ 87 (335)
....||.|+|+|..|.+++..|.+.|. +|+++| |+ .. . .. .+...+.. ...++.+.+ .
T Consensus 184 l~~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd~~~~R~G~~~~a~~~~~L~~~~~~~a~~~~~~~~~~~L~e~l-~ 262 (439)
T 2dvm_A 184 ISEITLALFGAGAAGFATLRILTEAGVKPENVRVVELVNGKPRILTSDLDLEKLFPYRGWLLKKTNGENIEGGPQEAL-K 262 (439)
T ss_dssp TTTCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEEEETTEEEECCTTSCHHHHSTTCHHHHTTSCTTCCCSSHHHHH-T
T ss_pred ccCCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEEccCCCcCccccccchhHHHHHHHHHhhccccccccccHHHHh-c
Confidence 356799999999999999999999998 799999 87 32 2 11 01111111 134566666 7
Q ss_pred CCCEEEEecCc--hhH-HHHHhhccccccCCccEEEEcCCCC-chHHHHHHhhCCCCCceE-eccccC
Q 044593 88 HPDVVLLSTSI--LST-QSVLKSIPFQRLKRSTLFVDVLSVK-EFPRNLFLKYLPQDFDIL-CTHPMF 150 (335)
Q Consensus 88 ~aDvVIlavp~--~~~-~~vl~~l~~~~l~~~~iVvd~~SvK-~~~~~~l~~~l~~~~~~v-~~HPma 150 (335)
++|++|-++|. ... .+.++. +.++.+|+|++.-. +...+..++. +..++ .+-.|.
T Consensus 263 ~aDVlInaT~~~~G~~~~e~v~~-----m~~~~iVfDLynP~~t~~~~~A~~~---G~~ivatG~~ml 322 (439)
T 2dvm_A 263 DADVLISFTRPGPGVIKPQWIEK-----MNEDAIVFPLANPVPEILPEEAKKA---GARIVATGRSDY 322 (439)
T ss_dssp TCSEEEECSCCCSSSSCHHHHTT-----SCTTCEEEECCSSSCSSCHHHHHHH---TCSEECBSCSSS
T ss_pred cCCEEEEcCCCccCCCChHHHHh-----cCCCCEEEECCCCCCcchHHHHHHc---CCeEEcCCCchh
Confidence 89999999998 443 333332 45778999994221 2344444443 33455 444554
No 393
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=96.45 E-value=0.0021 Score=58.41 Aligned_cols=58 Identities=16% Similarity=0.089 Sum_probs=42.0
Q ss_pred CeEEEEcc-cHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEec
Q 044593 32 LKIAVIGF-GNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLST 96 (335)
Q Consensus 32 ~kI~IIG~-G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlav 96 (335)
|||.|.|. |.||+.++..|.+.||+|++..|++.... +.......+.+ .++|.||-+.
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~~------~~~~~~~~~~l-~~~d~vihla 59 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPGR------ITWDELAASGL-PSCDAAVNLA 59 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTE------EEHHHHHHHCC-CSCSEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcCe------eecchhhHhhc-cCCCEEEEec
Confidence 89999995 99999999999999999999999875321 10000011223 6889998654
No 394
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=96.45 E-value=0.0051 Score=56.91 Aligned_cols=68 Identities=13% Similarity=0.100 Sum_probs=48.3
Q ss_pred CCCCeEEEEc-ccHHHHHHHHHHHHcCCeEEEEcCCCCcH-H---HHHh-------CCCce----ecC---hhhHhhcCC
Q 044593 29 STSLKIAVIG-FGNFGQFLAKAFARHHHTLLVHSRSDHSP-A---VRQQ-------LNAPF----FAD---LNDLCELHP 89 (335)
Q Consensus 29 ~~~~kI~IIG-~G~mG~siA~~L~~~G~~V~~~dr~~~~~-~---~a~~-------~g~~~----~~~---~~~~~~~~a 89 (335)
+++|+|.|.| .|.+|+.++..|.+.|++|++++|++... . .... .++.. ..+ ..+++ +++
T Consensus 23 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-~~~ 101 (351)
T 3ruf_A 23 FSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVM-KGV 101 (351)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHT-TTC
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHh-cCC
Confidence 4678999999 69999999999999999999999976432 1 1111 23321 122 23444 689
Q ss_pred CEEEEecC
Q 044593 90 DVVLLSTS 97 (335)
Q Consensus 90 DvVIlavp 97 (335)
|+||-+..
T Consensus 102 d~Vih~A~ 109 (351)
T 3ruf_A 102 DHVLHQAA 109 (351)
T ss_dssp SEEEECCC
T ss_pred CEEEECCc
Confidence 99998765
No 395
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=96.45 E-value=0.0092 Score=56.99 Aligned_cols=95 Identities=12% Similarity=0.113 Sum_probs=65.8
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCC-eEEEEcCCCCcHHHHHhCCCceec-----ChhhHhh-----cCCCEEEEecC
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHH-TLLVHSRSDHSPAVRQQLNAPFFA-----DLNDLCE-----LHPDVVLLSTS 97 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~-~V~~~dr~~~~~~~a~~~g~~~~~-----~~~~~~~-----~~aDvVIlavp 97 (335)
..+.+|.|+|+|.+|...+..++..|. +|++.+++++..+.++++|....- +..+.+. ..+|+||-|+.
T Consensus 212 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vid~~g 291 (404)
T 3ip1_A 212 RPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDYTNGLGAKLFLEATG 291 (404)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTCCCSEEEECSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHhCCCCCCEEEECCC
Confidence 356899999999999999999999999 899999999888888888875321 2211110 25899999988
Q ss_pred ch--hHHHHHhhccccccCCccEEEEcCC
Q 044593 98 IL--STQSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 98 ~~--~~~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
.. .....++.+. ..++++..++.++.
T Consensus 292 ~~~~~~~~~~~~l~-~~~~~~G~iv~~G~ 319 (404)
T 3ip1_A 292 VPQLVWPQIEEVIW-RARGINATVAIVAR 319 (404)
T ss_dssp CHHHHHHHHHHHHH-HCSCCCCEEEECSC
T ss_pred CcHHHHHHHHHHHH-hccCCCcEEEEeCC
Confidence 76 2333333330 11256667776654
No 396
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=96.44 E-value=0.0069 Score=56.30 Aligned_cols=92 Identities=11% Similarity=0.049 Sum_probs=64.8
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceec-----ChhhHhh---cCCCEEEEecCchh
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFA-----DLNDLCE---LHPDVVLLSTSILS 100 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~-----~~~~~~~---~~aDvVIlavp~~~ 100 (335)
..+.+|.|+|+|.+|...+..++..|.+|++.+++++..+.++++|....- +..+.+. ...|+||.++....
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~~d~vid~~g~~~ 244 (340)
T 3s2e_A 165 RPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGVLVTAVSPK 244 (340)
T ss_dssp CTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEEEEESSCCHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHhCCCCCEEEEeCCCHH
Confidence 356899999999999999999999999999999999888888988875321 2222110 26788888876443
Q ss_pred -HHHHHhhccccccCCccEEEEcCCC
Q 044593 101 -TQSVLKSIPFQRLKRSTLFVDVLSV 125 (335)
Q Consensus 101 -~~~vl~~l~~~~l~~~~iVvd~~Sv 125 (335)
+...++. ++++..++.++..
T Consensus 245 ~~~~~~~~-----l~~~G~iv~~G~~ 265 (340)
T 3s2e_A 245 AFSQAIGM-----VRRGGTIALNGLP 265 (340)
T ss_dssp HHHHHHHH-----EEEEEEEEECSCC
T ss_pred HHHHHHHH-----hccCCEEEEeCCC
Confidence 3344433 3455666666543
No 397
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=96.42 E-value=0.0037 Score=56.94 Aligned_cols=36 Identities=19% Similarity=0.108 Sum_probs=33.2
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCC
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSD 64 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~ 64 (335)
.++++|.|||.|.+|.+-+..|.+.|++|++++++.
T Consensus 11 l~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 11 LKDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp CTTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred cCCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 468899999999999999999999999999998764
No 398
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=96.41 E-value=0.017 Score=53.89 Aligned_cols=92 Identities=11% Similarity=0.048 Sum_probs=63.8
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCcee------cChhhHhh----cCCCEEEEecC
Q 044593 29 STSLKIAVIGF-GNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFF------ADLNDLCE----LHPDVVLLSTS 97 (335)
Q Consensus 29 ~~~~kI~IIG~-G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~------~~~~~~~~----~~aDvVIlavp 97 (335)
..+.+|.|+|+ |.+|..++..++..|.+|++.+++++..+.+++.|.... .+..+.+. ...|+||-++.
T Consensus 168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g 247 (347)
T 2hcy_A 168 MAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAHGVINVSV 247 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCCEEEETTTCSCHHHHHHHHHTSCEEEEEECSS
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCceEEecCccHhHHHHHHHHhCCCCCEEEECCC
Confidence 35678999998 999999999999999999999999888777888776421 12222220 15799998887
Q ss_pred ch-hHHHHHhhccccccCCccEEEEcCCC
Q 044593 98 IL-STQSVLKSIPFQRLKRSTLFVDVLSV 125 (335)
Q Consensus 98 ~~-~~~~vl~~l~~~~l~~~~iVvd~~Sv 125 (335)
.. .+...++ .++++..++.+++.
T Consensus 248 ~~~~~~~~~~-----~l~~~G~iv~~g~~ 271 (347)
T 2hcy_A 248 SEAAIEASTR-----YVRANGTTVLVGMP 271 (347)
T ss_dssp CHHHHHHHTT-----SEEEEEEEEECCCC
T ss_pred cHHHHHHHHH-----HHhcCCEEEEEeCC
Confidence 53 2333333 34455667777653
No 399
>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}
Probab=96.39 E-value=0.0051 Score=58.56 Aligned_cols=90 Identities=14% Similarity=0.200 Sum_probs=57.7
Q ss_pred CCCeEEEEc-ccHHHHHHHH-HHHHcCC---eEEEE-cCCCC-cHHHHHhCCCcee--cChhhHhhcCCCEEEEecCchh
Q 044593 30 TSLKIAVIG-FGNFGQFLAK-AFARHHH---TLLVH-SRSDH-SPAVRQQLNAPFF--ADLNDLCELHPDVVLLSTSILS 100 (335)
Q Consensus 30 ~~~kI~IIG-~G~mG~siA~-~L~~~G~---~V~~~-dr~~~-~~~~a~~~g~~~~--~~~~~~~~~~aDvVIlavp~~~ 100 (335)
..+||+||| .|..|.-+.+ .|.++.+ ++..+ .++.. ............. .+.+++ .++|+||+|+|...
T Consensus 3 ~~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~aG~~~~~~~~~~~~v~~~~~~~~~--~~vDvvf~a~~~~~ 80 (377)
T 3uw3_A 3 GSMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTSNAGGKAPSFAKNETTLKDATSIDDL--KKCDVIITCQGGDY 80 (377)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSCTTSBCCTTCCSCCBCEETTCHHHH--HTCSEEEECSCHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEechhcCCCHHHcCCCceEEEeCCChhHh--cCCCEEEECCChHH
Confidence 458999999 6999999999 7777653 55544 33221 1111111111221 233343 68999999999988
Q ss_pred HHHHHhhccccccCCcc--EEEEcCCC
Q 044593 101 TQSVLKSIPFQRLKRST--LFVDVLSV 125 (335)
Q Consensus 101 ~~~vl~~l~~~~l~~~~--iVvd~~Sv 125 (335)
..++...+ ++.|+ +|+|.++-
T Consensus 81 s~~~~~~~----~~~G~k~~VID~ss~ 103 (377)
T 3uw3_A 81 TNDVFPKL----RAAGWNGYWIDAASS 103 (377)
T ss_dssp HHHHHHHH----HHTTCCSEEEECSST
T ss_pred HHHHHHHH----HHCCCCEEEEeCCcc
Confidence 88877765 23554 89999863
No 400
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=96.37 E-value=0.005 Score=56.90 Aligned_cols=64 Identities=20% Similarity=0.131 Sum_probs=44.6
Q ss_pred cCCCCCeEEEEcc-cHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCce-------ecChhhHhhcCCCEEEEecC
Q 044593 27 VKSTSLKIAVIGF-GNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPF-------FADLNDLCELHPDVVLLSTS 97 (335)
Q Consensus 27 ~~~~~~kI~IIG~-G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~-------~~~~~~~~~~~aDvVIlavp 97 (335)
.+.++|+|.|.|. |.+|+.++..|.+.|++|++++|++.. .++.. ..+..+++ .++|+||-+..
T Consensus 15 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~------~~~~~~~~Dl~d~~~~~~~~-~~~d~vih~A~ 86 (347)
T 4id9_A 15 VPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG------TGGEEVVGSLEDGQALSDAI-MGVSAVLHLGA 86 (347)
T ss_dssp ------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS------SCCSEEESCTTCHHHHHHHH-TTCSEEEECCC
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC------CCccEEecCcCCHHHHHHHH-hCCCEEEECCc
Confidence 3456789999995 999999999999999999999998754 22221 12233445 68999998754
No 401
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=96.37 E-value=0.0036 Score=58.14 Aligned_cols=65 Identities=20% Similarity=0.147 Sum_probs=45.4
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHHcCC-------eEEEEcCCCC--cHH-HH---HhCC------CceecChhhHhhcCCC
Q 044593 31 SLKIAVIGF-GNFGQFLAKAFARHHH-------TLLVHSRSDH--SPA-VR---QQLN------APFFADLNDLCELHPD 90 (335)
Q Consensus 31 ~~kI~IIG~-G~mG~siA~~L~~~G~-------~V~~~dr~~~--~~~-~a---~~~g------~~~~~~~~~~~~~~aD 90 (335)
.|||.|+|. |.+|+.++..|...|+ +|+++|+++. ..+ .+ .... +....+..+.+ +++|
T Consensus 4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~~di~~~~~~~~a~-~~~D 82 (327)
T 1y7t_A 4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVAF-KDAD 82 (327)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHT-TTCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcccccccCCeEeccChHHHh-CCCC
Confidence 479999996 9999999999999886 8999998752 111 11 1111 11224555666 7899
Q ss_pred EEEEec
Q 044593 91 VVLLST 96 (335)
Q Consensus 91 vVIlav 96 (335)
+||.+.
T Consensus 83 ~Vih~A 88 (327)
T 1y7t_A 83 YALLVG 88 (327)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 999864
No 402
>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A
Probab=96.37 E-value=0.0049 Score=58.51 Aligned_cols=88 Identities=14% Similarity=0.200 Sum_probs=56.4
Q ss_pred CeEEEEc-ccHHHHHHHH-HHHHcCC---eEEEE-cCCCC-cHHHHHhCCCcee--cChhhHhhcCCCEEEEecCchhHH
Q 044593 32 LKIAVIG-FGNFGQFLAK-AFARHHH---TLLVH-SRSDH-SPAVRQQLNAPFF--ADLNDLCELHPDVVLLSTSILSTQ 102 (335)
Q Consensus 32 ~kI~IIG-~G~mG~siA~-~L~~~G~---~V~~~-dr~~~-~~~~a~~~g~~~~--~~~~~~~~~~aDvVIlavp~~~~~ 102 (335)
|||+||| .|..|+-+.+ .|.++.+ ++..+ .++.. ............. .+.+++ .++|+||+|+|.....
T Consensus 1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~aG~~~~~~~~~~~~~~~~~~~~~~--~~~Dvvf~a~~~~~s~ 78 (370)
T 3pzr_A 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAPNFGKDAGMLHDAFDIESL--KQLDAVITCQGGSYTE 78 (370)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCCSSSCCCBCEETTCHHHH--TTCSEEEECSCHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEeccccCcCHHHhCCCceEEEecCChhHh--ccCCEEEECCChHHHH
Confidence 6899999 6999999998 7777653 55544 33321 1110111111221 233343 6899999999998888
Q ss_pred HHHhhccccccCCc--cEEEEcCCC
Q 044593 103 SVLKSIPFQRLKRS--TLFVDVLSV 125 (335)
Q Consensus 103 ~vl~~l~~~~l~~~--~iVvd~~Sv 125 (335)
++...+ ++.| ++|+|.++-
T Consensus 79 ~~~~~~----~~~G~k~~VID~ss~ 99 (370)
T 3pzr_A 79 KVYPAL----RQAGWKGYWIDAAST 99 (370)
T ss_dssp HHHHHH----HHTTCCCEEEECSST
T ss_pred HHHHHH----HHCCCCEEEEeCCch
Confidence 777765 2345 489999864
No 403
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=96.37 E-value=0.012 Score=55.07 Aligned_cols=91 Identities=14% Similarity=0.084 Sum_probs=64.3
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCcee---c---Ch-hhH---hh----cCCCEEEE
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFF---A---DL-NDL---CE----LHPDVVLL 94 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~---~---~~-~~~---~~----~~aDvVIl 94 (335)
..+.+|.|+|+|.+|...+..++..|.+|++.+++++..+.++++|.... . +. +++ .. ..+|+||-
T Consensus 167 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~~g~g~D~vid 246 (352)
T 1e3j_A 167 QLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTID 246 (352)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHHhccccCCCCCEEEE
Confidence 35689999999999999999999999999999999888888888887421 1 11 111 10 25899999
Q ss_pred ecCchh-HHHHHhhccccccCCccEEEEcCC
Q 044593 95 STSILS-TQSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 95 avp~~~-~~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
++.... +...++. ++++..++.++.
T Consensus 247 ~~g~~~~~~~~~~~-----l~~~G~iv~~G~ 272 (352)
T 1e3j_A 247 CSGNEKCITIGINI-----TRTGGTLMLVGM 272 (352)
T ss_dssp CSCCHHHHHHHHHH-----SCTTCEEEECSC
T ss_pred CCCCHHHHHHHHHH-----HhcCCEEEEEec
Confidence 987653 3444443 345556666653
No 404
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=96.36 E-value=0.0064 Score=56.89 Aligned_cols=89 Identities=16% Similarity=0.235 Sum_probs=55.8
Q ss_pred CeEEEEcccHHHHHHHHHHHHc---CCeEEEE-cCC-CCcHHHHHh----C-----------------C--Ccee--cCh
Q 044593 32 LKIAVIGFGNFGQFLAKAFARH---HHTLLVH-SRS-DHSPAVRQQ----L-----------------N--APFF--ADL 81 (335)
Q Consensus 32 ~kI~IIG~G~mG~siA~~L~~~---G~~V~~~-dr~-~~~~~~a~~----~-----------------g--~~~~--~~~ 81 (335)
.||+|+|+|.+|..+.+.|.+. .++|+.+ |+. ++......+ . | +... .++
T Consensus 1 ~kVgI~G~G~iGr~llR~l~~~~~p~~eivain~~~~~~~~~~ll~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~~dp 80 (332)
T 1hdg_O 1 ARVAINGFGRIGRLVYRIIYERKNPDIEVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPDP 80 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCTTCEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCSSG
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCCCeEEEEEEcCCChHHhhhhccCcCcCCCcCCcEEEcCCEEEECCeEEEEEecCCh
Confidence 4899999999999999999876 3677644 432 111111110 0 1 1111 144
Q ss_pred hhHhhc--CCCEEEEecCchhHHHHHhhccccccCCcc--EEEEcCC
Q 044593 82 NDLCEL--HPDVVLLSTSILSTQSVLKSIPFQRLKRST--LFVDVLS 124 (335)
Q Consensus 82 ~~~~~~--~aDvVIlavp~~~~~~vl~~l~~~~l~~~~--iVvd~~S 124 (335)
+++.+. ++|+||.|+|.....+....+ ++.|. +|+|.++
T Consensus 81 ~~l~w~~~~vDvV~~atg~~~s~e~a~~~----l~aGakkvVId~~a 123 (332)
T 1hdg_O 81 SKLPWKDLGVDFVIESTGVFRNREKAELH----LQAGAKKVIITAPA 123 (332)
T ss_dssp GGSCHHHHTCCEEEECSSSCCBHHHHTHH----HHTTCSEEEESSCC
T ss_pred HHCcccccCCCEEEECCccchhHHHHHHH----HHcCCcEEEEeCCC
Confidence 443112 799999999988877766654 34555 8888765
No 405
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=96.35 E-value=0.0039 Score=56.76 Aligned_cols=69 Identities=16% Similarity=0.136 Sum_probs=47.7
Q ss_pred CCCCeEEEEc-ccHHHHHHHHHHHHcCCeEEEEcCCCCcHH-HHHh----CCCc----eecC---hhhHhhcCCCEEEEe
Q 044593 29 STSLKIAVIG-FGNFGQFLAKAFARHHHTLLVHSRSDHSPA-VRQQ----LNAP----FFAD---LNDLCELHPDVVLLS 95 (335)
Q Consensus 29 ~~~~kI~IIG-~G~mG~siA~~L~~~G~~V~~~dr~~~~~~-~a~~----~g~~----~~~~---~~~~~~~~aDvVIla 95 (335)
.+++++.|+| .|.+|.+++..|.+.|++|++++|+++..+ .+.+ .++. ..++ ..+++ +++|+||-+
T Consensus 117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~-~~~DvlVn~ 195 (287)
T 1lu9_A 117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAV-KGAHFVFTA 195 (287)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHT-TTCSEEEEC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHH-HhCCEEEEC
Confidence 4568899999 999999999999999999999999865432 2221 1221 1122 23334 567888888
Q ss_pred cCc
Q 044593 96 TSI 98 (335)
Q Consensus 96 vp~ 98 (335)
++.
T Consensus 196 ag~ 198 (287)
T 1lu9_A 196 GAI 198 (287)
T ss_dssp CCT
T ss_pred CCc
Confidence 764
No 406
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=96.34 E-value=0.0067 Score=55.87 Aligned_cols=91 Identities=12% Similarity=0.069 Sum_probs=58.7
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhC----CC---ce-ecChhhHhhcCCCEEEEecCchh
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQL----NA---PF-FADLNDLCELHPDVVLLSTSILS 100 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~----g~---~~-~~~~~~~~~~~aDvVIlavp~~~ 100 (335)
...++|..||+|..|.+.....+..|.+|+++|.+++..+.|++. |. .+ ..+..++....+|+|+++.-...
T Consensus 121 ~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~d~~FDvV~~~a~~~d 200 (298)
T 3fpf_A 121 RRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVIDGLEFDVLMVAALAEP 200 (298)
T ss_dssp CTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGGGCCCSEEEECTTCSC
T ss_pred CCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCCCCCcCEEEECCCccC
Confidence 467899999999865432222223588999999999877666543 43 11 22333332157899998765555
Q ss_pred HHHHHhhccccccCCccEEE
Q 044593 101 TQSVLKSIPFQRLKRSTLFV 120 (335)
Q Consensus 101 ~~~vl~~l~~~~l~~~~iVv 120 (335)
...+++++. ..++||..++
T Consensus 201 ~~~~l~el~-r~LkPGG~Lv 219 (298)
T 3fpf_A 201 KRRVFRNIH-RYVDTETRII 219 (298)
T ss_dssp HHHHHHHHH-HHCCTTCEEE
T ss_pred HHHHHHHHH-HHcCCCcEEE
Confidence 567777774 5677776554
No 407
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=96.34 E-value=0.0097 Score=55.33 Aligned_cols=92 Identities=16% Similarity=0.184 Sum_probs=66.9
Q ss_pred CCCCeEEEEccc-HHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCcee-----cChhhHhh-----cCCCEEEEecC
Q 044593 29 STSLKIAVIGFG-NFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFF-----ADLNDLCE-----LHPDVVLLSTS 97 (335)
Q Consensus 29 ~~~~kI~IIG~G-~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~-----~~~~~~~~-----~~aDvVIlavp 97 (335)
..+.+|.|+|+| .+|...+..++..|.+|++.+++++..+.++++|.... .+..+.+. ...|+||-|+.
T Consensus 143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g 222 (340)
T 3gms_A 143 QRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGADAAIDSIG 222 (340)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESSC
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCcEEEeCCcccHHHHHHHHhCCCCCcEEEECCC
Confidence 356899999986 99999999999999999999999998888888887521 12222110 26899999988
Q ss_pred chhHHHHHhhccccccCCccEEEEcCCC
Q 044593 98 ILSTQSVLKSIPFQRLKRSTLFVDVLSV 125 (335)
Q Consensus 98 ~~~~~~vl~~l~~~~l~~~~iVvd~~Sv 125 (335)
.......+.. ++++..++.++..
T Consensus 223 ~~~~~~~~~~-----l~~~G~iv~~G~~ 245 (340)
T 3gms_A 223 GPDGNELAFS-----LRPNGHFLTIGLL 245 (340)
T ss_dssp HHHHHHHHHT-----EEEEEEEEECCCT
T ss_pred ChhHHHHHHH-----hcCCCEEEEEeec
Confidence 7766555532 4566677777643
No 408
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=96.34 E-value=0.0083 Score=56.21 Aligned_cols=68 Identities=21% Similarity=0.238 Sum_probs=48.6
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHHcCCeEEEEcCCCCcH--HHHHhC-CCc----e-ecC---hhhHhhcCCCEEEEecC
Q 044593 30 TSLKIAVIG-FGNFGQFLAKAFARHHHTLLVHSRSDHSP--AVRQQL-NAP----F-FAD---LNDLCELHPDVVLLSTS 97 (335)
Q Consensus 30 ~~~kI~IIG-~G~mG~siA~~L~~~G~~V~~~dr~~~~~--~~a~~~-g~~----~-~~~---~~~~~~~~aDvVIlavp 97 (335)
..|+|.|.| .|.+|+.++..|.+.|++|++.+|++... +...+. ++. . .++ ..+++ +++|+||.+..
T Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~-~~~d~Vi~~a~ 82 (352)
T 1xgk_A 4 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLF-EGAHLAFINTT 82 (352)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHH-TTCSEEEECCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHH-hcCCEEEEcCC
Confidence 367899999 69999999999999999999999988654 222221 332 1 223 23445 78999997764
Q ss_pred c
Q 044593 98 I 98 (335)
Q Consensus 98 ~ 98 (335)
.
T Consensus 83 ~ 83 (352)
T 1xgk_A 83 S 83 (352)
T ss_dssp S
T ss_pred C
Confidence 3
No 409
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=96.33 E-value=0.007 Score=55.69 Aligned_cols=37 Identities=24% Similarity=0.256 Sum_probs=33.3
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHHcCCeEEEEcCCCCc
Q 044593 30 TSLKIAVIG-FGNFGQFLAKAFARHHHTLLVHSRSDHS 66 (335)
Q Consensus 30 ~~~kI~IIG-~G~mG~siA~~L~~~G~~V~~~dr~~~~ 66 (335)
++|+|.|.| .|.||..++..|.+.|++|++.+|++..
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~ 41 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNS 41 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSS
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcc
Confidence 467999999 6999999999999999999999998654
No 410
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=96.32 E-value=0.0091 Score=56.37 Aligned_cols=91 Identities=14% Similarity=0.158 Sum_probs=64.7
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCC-eEEEEcCCCCcHHHHHhCCCcee-----cChhhHhhc-------CCCEEEEe
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHH-TLLVHSRSDHSPAVRQQLNAPFF-----ADLNDLCEL-------HPDVVLLS 95 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~-~V~~~dr~~~~~~~a~~~g~~~~-----~~~~~~~~~-------~aDvVIla 95 (335)
..+.+|.|+|+|.+|...+..++..|. +|++.+++++..+.++++|+... .+..+.+.+ .+|+||-|
T Consensus 181 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~Dvvid~ 260 (370)
T 4ej6_A 181 KAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIEC 260 (370)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEEEEEEC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCCEEEEC
Confidence 357899999999999999999999998 89999999888888888887532 122222211 47999998
Q ss_pred cCch-hHHHHHhhccccccCCccEEEEcCC
Q 044593 96 TSIL-STQSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 96 vp~~-~~~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
+... .....++.+ +++..++.++.
T Consensus 261 ~G~~~~~~~~~~~l-----~~~G~vv~~G~ 285 (370)
T 4ej6_A 261 AGVAETVKQSTRLA-----KAGGTVVILGV 285 (370)
T ss_dssp SCCHHHHHHHHHHE-----EEEEEEEECSC
T ss_pred CCCHHHHHHHHHHh-----ccCCEEEEEec
Confidence 8743 344444433 35556666653
No 411
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=96.31 E-value=0.0046 Score=57.92 Aligned_cols=90 Identities=16% Similarity=0.186 Sum_probs=55.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHHcC-CeEEEE-cCC-CCcHHHHHh----C-----------------C--Ccee--cChh
Q 044593 31 SLKIAVIGFGNFGQFLAKAFARHH-HTLLVH-SRS-DHSPAVRQQ----L-----------------N--APFF--ADLN 82 (335)
Q Consensus 31 ~~kI~IIG~G~mG~siA~~L~~~G-~~V~~~-dr~-~~~~~~a~~----~-----------------g--~~~~--~~~~ 82 (335)
++||+|+|+|.+|..+.+.|.+.. .+|+++ |+. ++......+ . | +... .++.
T Consensus 1 mikVgI~G~G~iGr~l~R~l~~~~~veivain~~~~~~~~~~ll~~ds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~dp~ 80 (334)
T 3cmc_O 1 AVKVGINGFGRIGRNVFRAALKNPDIEVVAVNDLTDANTLAHLLKYDSVHGRLDAEVSVNGNNLVVNGKEIIVKAERDPE 80 (334)
T ss_dssp CEEEEEESCSHHHHHHHHHHTTCTTEEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSSGG
T ss_pred CeEEEEECCCHHHHHHHHHHhCCCCeEEEEEeCCCCHHHHHHHhccCCcCCCcCceEEEccCcEEECCEEEEEEecCChh
Confidence 369999999999999999998763 466544 441 111111110 0 1 1112 1344
Q ss_pred hHhhc--CCCEEEEecCchhHHHHHhhccccccCCcc--EEEEcCC
Q 044593 83 DLCEL--HPDVVLLSTSILSTQSVLKSIPFQRLKRST--LFVDVLS 124 (335)
Q Consensus 83 ~~~~~--~aDvVIlavp~~~~~~vl~~l~~~~l~~~~--iVvd~~S 124 (335)
++.+. ++|+||.|+|.....+....+ ++.|+ +|+|.++
T Consensus 81 ~i~w~~~~vDvV~~atg~~~s~e~a~~~----l~~Gak~vVId~pa 122 (334)
T 3cmc_O 81 NLAWGEIGVDIVVESTGRFTKREDAAKH----LEAGAKKVIISAPA 122 (334)
T ss_dssp GCCTGGGTCCEEEECSSSCCBHHHHTHH----HHTTCSEEEESSCC
T ss_pred hcCcccCccCEEEECCCchhhHHHHHHH----HHCCCCEEEEeCCC
Confidence 33112 799999999988777766554 34555 8888754
No 412
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=96.29 E-value=0.0037 Score=57.66 Aligned_cols=70 Identities=20% Similarity=0.261 Sum_probs=47.7
Q ss_pred cCCCCCeEEEEcc-cHHHHHHHHHHHHcCCeEEEEcCCCCcHH-HHHh-CCCc----eecC---hhhHhhc--CCCEEEE
Q 044593 27 VKSTSLKIAVIGF-GNFGQFLAKAFARHHHTLLVHSRSDHSPA-VRQQ-LNAP----FFAD---LNDLCEL--HPDVVLL 94 (335)
Q Consensus 27 ~~~~~~kI~IIG~-G~mG~siA~~L~~~G~~V~~~dr~~~~~~-~a~~-~g~~----~~~~---~~~~~~~--~aDvVIl 94 (335)
...+.|+|.|.|. |.+|..++..|.+.|++|++++|++.... .... .++. ...+ ..+++ + ++|+||.
T Consensus 16 ~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~-~~~~~D~vih 94 (330)
T 2pzm_A 16 PRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAF-DSFKPTHVVH 94 (330)
T ss_dssp STTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHH-HHHCCSEEEE
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHH-hhcCCCEEEE
Confidence 3456789999995 99999999999999999999999754321 1111 1221 1122 23344 5 8999998
Q ss_pred ecC
Q 044593 95 STS 97 (335)
Q Consensus 95 avp 97 (335)
+..
T Consensus 95 ~A~ 97 (330)
T 2pzm_A 95 SAA 97 (330)
T ss_dssp CCC
T ss_pred CCc
Confidence 764
No 413
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=96.29 E-value=0.0043 Score=53.20 Aligned_cols=34 Identities=29% Similarity=0.383 Sum_probs=31.3
Q ss_pred CeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCC
Q 044593 32 LKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDH 65 (335)
Q Consensus 32 ~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~ 65 (335)
..|+|||+|.-|.+.|..|+++|++|+++|+++.
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~ 36 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRG 36 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 4599999999999999999999999999998754
No 414
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=96.29 E-value=0.004 Score=58.47 Aligned_cols=89 Identities=15% Similarity=0.224 Sum_probs=52.5
Q ss_pred CeEEEEcccHHHHHHHHHHHHcC---CeEEEE-cCC-CCcHHHHHhC---------------------C--Cce--ecCh
Q 044593 32 LKIAVIGFGNFGQFLAKAFARHH---HTLLVH-SRS-DHSPAVRQQL---------------------N--APF--FADL 81 (335)
Q Consensus 32 ~kI~IIG~G~mG~siA~~L~~~G---~~V~~~-dr~-~~~~~~a~~~---------------------g--~~~--~~~~ 81 (335)
+||+|+|+|.+|..+.+.|.+.+ ++|+++ |+. ++......+. | +.. ..++
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~~~~~~evvaInd~~~~~~~~~l~~~ds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~dp 82 (339)
T 3b1j_A 3 IRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNTSDARTAAHLLEYDSVLGRFNADISYDENSITVNGKTMKIVCDRNP 82 (339)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSCCSEEEEEEECSSCHHHHHHHHHCCTTTCCCCSCEEEETTEEEETTEEEEEECCSCG
T ss_pred eEEEEECCCHHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHhccccccCCCCCcEEEcCCeeeecCceEEEEecCCh
Confidence 59999999999999999998862 566544 442 1221111110 1 111 2244
Q ss_pred hhHhh--cCCCEEEEecCchhHHHHHhhccccccCCcc--EEEEcCC
Q 044593 82 NDLCE--LHPDVVLLSTSILSTQSVLKSIPFQRLKRST--LFVDVLS 124 (335)
Q Consensus 82 ~~~~~--~~aDvVIlavp~~~~~~vl~~l~~~~l~~~~--iVvd~~S 124 (335)
+++.+ .++|+||.|+|.....+..... ++.|. +|+|.++
T Consensus 83 ~~l~w~~~~vDvV~e~tg~~~s~e~a~~~----l~~GakkVVId~~~ 125 (339)
T 3b1j_A 83 LNLPWKEWDIDLVIESTGVFVTAEGASKH----IQAGAKKVLITAPG 125 (339)
T ss_dssp GGSCTTTTTCCEEEECSSSCCBHHHHHHH----HHTTCSEEEESSCC
T ss_pred HHCcccccCCCEEEECCCccccHHHHHHH----HHcCCcEEEEeCCC
Confidence 44421 2789999999987766555543 22333 3666654
No 415
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=96.28 E-value=0.014 Score=53.98 Aligned_cols=91 Identities=13% Similarity=0.022 Sum_probs=62.1
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCcee------cChhhHhh----cCCCEEEEecC
Q 044593 29 STSLKIAVIGF-GNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFF------ADLNDLCE----LHPDVVLLSTS 97 (335)
Q Consensus 29 ~~~~kI~IIG~-G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~------~~~~~~~~----~~aDvVIlavp 97 (335)
..+.+|.|+|+ |.+|..++..++..|++|++.+++++..+.+++.|.... .+..+.+. ...|++|-++.
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g 223 (333)
T 1v3u_A 144 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVG 223 (333)
T ss_dssp CSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCTTCEEEEEESSC
T ss_pred CCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCcEEEecCCHHHHHHHHHHHhCCCCeEEEECCC
Confidence 35678999997 999999999999999999999998877776777776421 12222210 24788888877
Q ss_pred chhHHHHHhhccccccCCccEEEEcCC
Q 044593 98 ILSTQSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 98 ~~~~~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
.......++ .++++..++.++.
T Consensus 224 ~~~~~~~~~-----~l~~~G~~v~~g~ 245 (333)
T 1v3u_A 224 GEFLNTVLS-----QMKDFGKIAICGA 245 (333)
T ss_dssp HHHHHHHHT-----TEEEEEEEEECCC
T ss_pred hHHHHHHHH-----HHhcCCEEEEEec
Confidence 544333333 2445556666654
No 416
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=96.25 E-value=0.0068 Score=56.01 Aligned_cols=92 Identities=16% Similarity=0.014 Sum_probs=64.4
Q ss_pred CCCCeEEEEc-ccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCcee-----cChhhHhh-----cCCCEEEEecC
Q 044593 29 STSLKIAVIG-FGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFF-----ADLNDLCE-----LHPDVVLLSTS 97 (335)
Q Consensus 29 ~~~~kI~IIG-~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~-----~~~~~~~~-----~~aDvVIlavp 97 (335)
..+.+|.|+| .|.+|...+..++..|.+|++.+++++..+.+++.|.... .+..+.+. ...|+||-|+.
T Consensus 139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g 218 (325)
T 3jyn_A 139 KPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDGVG 218 (325)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEESSC
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCCceEEEECCC
Confidence 3568999999 7999999999999999999999999888887887776421 11111110 25788888887
Q ss_pred chhHHHHHhhccccccCCccEEEEcCCC
Q 044593 98 ILSTQSVLKSIPFQRLKRSTLFVDVLSV 125 (335)
Q Consensus 98 ~~~~~~vl~~l~~~~l~~~~iVvd~~Sv 125 (335)
.......++. ++++..++.++..
T Consensus 219 ~~~~~~~~~~-----l~~~G~iv~~g~~ 241 (325)
T 3jyn_A 219 QDTWLTSLDS-----VAPRGLVVSFGNA 241 (325)
T ss_dssp GGGHHHHHTT-----EEEEEEEEECCCT
T ss_pred hHHHHHHHHH-----hcCCCEEEEEecC
Confidence 6555544443 3455666666543
No 417
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=96.25 E-value=0.0092 Score=55.31 Aligned_cols=92 Identities=14% Similarity=0.179 Sum_probs=66.4
Q ss_pred CCCCeEEEEc-ccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCcee-----cChhhHh-----hcCCCEEEEecC
Q 044593 29 STSLKIAVIG-FGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFF-----ADLNDLC-----ELHPDVVLLSTS 97 (335)
Q Consensus 29 ~~~~kI~IIG-~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~-----~~~~~~~-----~~~aDvVIlavp 97 (335)
..+.+|.|+| .|.+|...+..++..|.+|++.+++++..+.+++.|.... .+..+.+ ....|+||-|+.
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~g~D~vid~~g 226 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDSVG 226 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHTTTSCEEEEEECCG
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEeCCCchHHHHHHHHhCCCCceEEEECCC
Confidence 3568999999 8999999999999999999999999888888888887522 1111111 025899999888
Q ss_pred chhHHHHHhhccccccCCccEEEEcCCC
Q 044593 98 ILSTQSVLKSIPFQRLKRSTLFVDVLSV 125 (335)
Q Consensus 98 ~~~~~~vl~~l~~~~l~~~~iVvd~~Sv 125 (335)
.......++.+ +++..++.++..
T Consensus 227 ~~~~~~~~~~l-----~~~G~iv~~G~~ 249 (334)
T 3qwb_A 227 KDTFEISLAAL-----KRKGVFVSFGNA 249 (334)
T ss_dssp GGGHHHHHHHE-----EEEEEEEECCCT
T ss_pred hHHHHHHHHHh-----ccCCEEEEEcCC
Confidence 75555555443 456677777643
No 418
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=96.25 E-value=0.0082 Score=56.13 Aligned_cols=91 Identities=15% Similarity=0.140 Sum_probs=63.4
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCC-eEEEEcCCCCcHHHHHhCCCceec-----ChhhHhh-----cCCCEEEEecC
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHH-TLLVHSRSDHSPAVRQQLNAPFFA-----DLNDLCE-----LHPDVVLLSTS 97 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~-~V~~~dr~~~~~~~a~~~g~~~~~-----~~~~~~~-----~~aDvVIlavp 97 (335)
..+.+|.|+|+|.+|...+..++..|. +|++.|++++..+.++++|....- +..+.+. ..+|+||-|+.
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~g~D~v~d~~g 244 (352)
T 3fpc_A 165 KLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDIVEQILKATDGKGVDKVVIAGG 244 (352)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGGGSCHHHHHHHHTTTCCEEEEEECSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCCCcCHHHHHHHHcCCCCCCEEEECCC
Confidence 356889999999999999999998998 899999998888888888875321 1111110 24788888887
Q ss_pred ch-hHHHHHhhccccccCCccEEEEcCC
Q 044593 98 IL-STQSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 98 ~~-~~~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
.. .....++.+ +++..++.++.
T Consensus 245 ~~~~~~~~~~~l-----~~~G~~v~~G~ 267 (352)
T 3fpc_A 245 DVHTFAQAVKMI-----KPGSDIGNVNY 267 (352)
T ss_dssp CTTHHHHHHHHE-----EEEEEEEECCC
T ss_pred ChHHHHHHHHHH-----hcCCEEEEecc
Confidence 63 344444443 34556666653
No 419
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=96.24 E-value=0.0037 Score=56.07 Aligned_cols=66 Identities=14% Similarity=0.254 Sum_probs=48.5
Q ss_pred CeEEEEcc-cHHHHHHHHHHHHc--CCeEEEEcCCCCcHHHHHhCCCce----ecC---hhhHhhcCCCEEEEecCc
Q 044593 32 LKIAVIGF-GNFGQFLAKAFARH--HHTLLVHSRSDHSPAVRQQLNAPF----FAD---LNDLCELHPDVVLLSTSI 98 (335)
Q Consensus 32 ~kI~IIG~-G~mG~siA~~L~~~--G~~V~~~dr~~~~~~~a~~~g~~~----~~~---~~~~~~~~aDvVIlavp~ 98 (335)
|+|.|.|. |.+|+.++..|.+. |++|++++|++.........++.. ..+ +.+++ +++|+||.+...
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~-~~~d~vi~~a~~ 76 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKAF-AGVSKLLFISGP 76 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEEECCTTCHHHHHHHT-TTCSEEEECCCC
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEEEeccCCHHHHHHHH-hcCCEEEEcCCC
Confidence 57999995 99999999999998 999999999876554333445432 122 23444 689999987653
No 420
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=96.24 E-value=0.012 Score=55.29 Aligned_cols=89 Identities=19% Similarity=0.211 Sum_probs=64.0
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHH-hCCCcee---cChhh---HhhcCCCEEEEecCch-hH
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQ-QLNAPFF---ADLND---LCELHPDVVLLSTSIL-ST 101 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~-~~g~~~~---~~~~~---~~~~~aDvVIlavp~~-~~ 101 (335)
.+.+|.|+|+|.+|...+..++..|.+|++++++++..+.+. ++|.... .+.+. +. ..+|+||-|+... .+
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~-~g~D~vid~~g~~~~~ 258 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELA-DSLDYVIDTVPVHHAL 258 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCEEETTCHHHHHHST-TTEEEEEECCCSCCCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCceeeccccHHHHHHhc-CCCCEEEECCCChHHH
Confidence 567999999999999999999989999999999988877777 7786421 22221 12 3579999988754 34
Q ss_pred HHHHhhccccccCCccEEEEcCC
Q 044593 102 QSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 102 ~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
...++.+ +++..++.++.
T Consensus 259 ~~~~~~l-----~~~G~iv~~G~ 276 (357)
T 2cf5_A 259 EPYLSLL-----KLDGKLILMGV 276 (357)
T ss_dssp HHHHTTE-----EEEEEEEECSC
T ss_pred HHHHHHh-----ccCCEEEEeCC
Confidence 5555433 35556666654
No 421
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=96.24 E-value=0.0051 Score=56.03 Aligned_cols=65 Identities=17% Similarity=0.261 Sum_probs=38.9
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhc--CCCEEEEecC
Q 044593 31 SLKIAVIGF-GNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCEL--HPDVVLLSTS 97 (335)
Q Consensus 31 ~~kI~IIG~-G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~--~aDvVIlavp 97 (335)
+|+|.|.|. |.+|..++..|.+.|++|++.+|++.... .....+....+..+++ + .+|+||.+..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~Dl~d~~~~~~~~-~~~~~d~vih~A~ 69 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARPK-FEQVNLLDSNAVHHII-HDFQPHVIVHCAA 69 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC-------------------CHHHH-HHHCCSEEEECC-
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCCCC-eEEecCCCHHHHHHHH-HhhCCCEEEECCc
Confidence 578999995 99999999999999999999998754311 1111111122334444 3 4899998764
No 422
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=96.23 E-value=0.01 Score=55.85 Aligned_cols=91 Identities=16% Similarity=0.112 Sum_probs=62.5
Q ss_pred CCCCeEEEEc-ccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCcee-----cChhhHhh----cCCCEEEEecCc
Q 044593 29 STSLKIAVIG-FGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFF-----ADLNDLCE----LHPDVVLLSTSI 98 (335)
Q Consensus 29 ~~~~kI~IIG-~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~-----~~~~~~~~----~~aDvVIlavp~ 98 (335)
..+.+|.|+| .|.+|...+..++..|++|++.+++++..+.+++.|.... .+..+.+. ..+|+||-|+..
T Consensus 162 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~g~D~vid~~g~ 241 (362)
T 2c0c_A 162 SEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESVGG 241 (362)
T ss_dssp CTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHCTTCEEEEEECSCT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCCcEEEecCChhHHHHHHHhcCCCCCEEEECCCH
Confidence 3567999999 7999999999999999999999999887777888886422 12212110 247888888776
Q ss_pred hhHHHHHhhccccccCCccEEEEcCC
Q 044593 99 LSTQSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 99 ~~~~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
......++.+ +++..++.+++
T Consensus 242 ~~~~~~~~~l-----~~~G~iv~~g~ 262 (362)
T 2c0c_A 242 AMFDLAVDAL-----ATKGRLIVIGF 262 (362)
T ss_dssp HHHHHHHHHE-----EEEEEEEECCC
T ss_pred HHHHHHHHHH-----hcCCEEEEEeC
Confidence 4444444433 34445565554
No 423
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=96.20 E-value=0.012 Score=54.73 Aligned_cols=91 Identities=9% Similarity=0.073 Sum_probs=62.6
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCcee----cChhhHhh-----cCCCEEEEecCc
Q 044593 29 STSLKIAVIGF-GNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFF----ADLNDLCE-----LHPDVVLLSTSI 98 (335)
Q Consensus 29 ~~~~kI~IIG~-G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~----~~~~~~~~-----~~aDvVIlavp~ 98 (335)
..+.+|.|+|+ |.+|...+..++..|.+|++.+++++..+.++++|.... .+..+.+. ...|+||-|+..
T Consensus 158 ~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~v~~~~~~~g~Dvvid~~g~ 237 (342)
T 4eye_A 158 RAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIVLPLEEGWAKAVREATGGAGVDMVVDPIGG 237 (342)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEESSTTHHHHHHHHTTTSCEEEEEESCC-
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEecCchhHHHHHHHHhCCCCceEEEECCch
Confidence 35689999997 999999999999999999999999988888888776432 12211110 258888888876
Q ss_pred hhHHHHHhhccccccCCccEEEEcCC
Q 044593 99 LSTQSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 99 ~~~~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
......+..+ +++..++.++.
T Consensus 238 ~~~~~~~~~l-----~~~G~iv~~G~ 258 (342)
T 4eye_A 238 PAFDDAVRTL-----ASEGRLLVVGF 258 (342)
T ss_dssp -CHHHHHHTE-----EEEEEEEEC--
T ss_pred hHHHHHHHhh-----cCCCEEEEEEc
Confidence 6555544433 45566666654
No 424
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=96.20 E-value=0.0068 Score=56.67 Aligned_cols=89 Identities=18% Similarity=0.198 Sum_probs=55.7
Q ss_pred CeEEEEcccHHHHHHHHHHHHcC-CeEEEE-cCCC-CcHHHHHhC--------C--------Cc-------ee--cChhh
Q 044593 32 LKIAVIGFGNFGQFLAKAFARHH-HTLLVH-SRSD-HSPAVRQQL--------N--------AP-------FF--ADLND 83 (335)
Q Consensus 32 ~kI~IIG~G~mG~siA~~L~~~G-~~V~~~-dr~~-~~~~~a~~~--------g--------~~-------~~--~~~~~ 83 (335)
+||||+|+|.+|..+.+.+.+.. .+|+++ |+.. +......+. | +. .. .++.+
T Consensus 2 ikVgI~G~G~iG~~l~R~l~~~~~veiv~i~~~~~~~~~a~l~~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~~dp~~ 81 (330)
T 1gad_O 2 IKVGINGFGRIGRIVFRAAQKRSDIEIVAINDLLDADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDPAN 81 (330)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGGG
T ss_pred eEEEEECcCHHHHHHHHHHHcCCCeEEEEEcCCCChhHHhHhhcccccCCCCCCeEEEcCCEEEECCEEEEEEEcCChhh
Confidence 58999999999999999998764 466544 4322 221111121 1 10 11 13333
Q ss_pred Hhh--cCCCEEEEecCchhHHHHHhhccccccCCccEEEEcCC
Q 044593 84 LCE--LHPDVVLLSTSILSTQSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 84 ~~~--~~aDvVIlavp~~~~~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
+.+ .++|+||.|+|.....+....+ ++.|..++|+++
T Consensus 82 i~w~~~~vDvVf~atg~~~s~e~a~~~----l~~GakvVdlSa 120 (330)
T 1gad_O 82 LKWDEVGVDVVAEATGLFLTDETARKH----ITAGAKKVVMTG 120 (330)
T ss_dssp GCHHHHTCSEEEECSSSCCSHHHHTHH----HHTTCSEEEESS
T ss_pred CccccccCCEEEECCCccccHHHHHHH----HHCCCEEEEECC
Confidence 311 3799999999988877766554 456777788764
No 425
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=96.20 E-value=0.0089 Score=55.96 Aligned_cols=34 Identities=18% Similarity=0.463 Sum_probs=28.7
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCeEEE-EcC
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHHTLLV-HSR 62 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~-~dr 62 (335)
..+.||||.|+|.||..+++++...|.+|+. .|+
T Consensus 5 ~~~~kvgInGFGRIGrlv~R~~~~~~veivainDp 39 (346)
T 3h9e_O 5 ARELTVGINGFGRIGRLVLRACMEKGVKVVAVNDP 39 (346)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CCeeEEEEECCChHHHHHHHHHHhCCCEEEEEeCC
Confidence 3567999999999999999999888888766 565
No 426
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=96.19 E-value=0.0063 Score=57.89 Aligned_cols=29 Identities=17% Similarity=0.500 Sum_probs=24.3
Q ss_pred CeEEEEcccHHHHHHHHHHHHcC---CeEEEE
Q 044593 32 LKIAVIGFGNFGQFLAKAFARHH---HTLLVH 60 (335)
Q Consensus 32 ~kI~IIG~G~mG~siA~~L~~~G---~~V~~~ 60 (335)
+||+|+|+|.||..+.+.|.+.+ ++|+++
T Consensus 3 ikVgInGfGrIGr~vlR~l~~~~~~~veIVaI 34 (380)
T 2d2i_A 3 IRVAINGFGRIGRNFLRCWFGRQNTDLEVVAI 34 (380)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSCSEEEEEE
T ss_pred cEEEEECcCHHHHHHHHHHhcCCCCCEEEEEE
Confidence 59999999999999999998763 566554
No 427
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=96.18 E-value=0.0052 Score=57.69 Aligned_cols=89 Identities=17% Similarity=0.217 Sum_probs=54.9
Q ss_pred CeEEEEcccHHHHHHHHHHHH---c-CCeEEEE-cC-CCCcHHHHHhC---------------------C--Ccee--cC
Q 044593 32 LKIAVIGFGNFGQFLAKAFAR---H-HHTLLVH-SR-SDHSPAVRQQL---------------------N--APFF--AD 80 (335)
Q Consensus 32 ~kI~IIG~G~mG~siA~~L~~---~-G~~V~~~-dr-~~~~~~~a~~~---------------------g--~~~~--~~ 80 (335)
+||+|+|+|.+|..+.+.|.+ . .++|+++ |+ +++......+. | +... .+
T Consensus 3 ikVgI~G~G~iGr~l~r~l~~~~~~~~~eivai~~~~~~~~~~~ll~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~~d 82 (339)
T 2x5j_O 3 VRVAINGFGRIGRNVVRALYESGRRAEITVVAINELADAAGMAHLLKYDTSHGRFAWEVRQERDQLFVGDDAIRVLHERS 82 (339)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTSGGGTEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSS
T ss_pred eEEEEECcCHHHHHHHHHHHcCCCCCCEEEEEEeCCCCHHHHHHHhcccccCCCCCceEEEcCCeeEECCEEEEEEecCC
Confidence 599999999999999999987 4 4676554 43 11221111110 1 1111 23
Q ss_pred hhhHhhc--CCCEEEEecCchhHHHHHhhccccccCCcc--EEEEcCC
Q 044593 81 LNDLCEL--HPDVVLLSTSILSTQSVLKSIPFQRLKRST--LFVDVLS 124 (335)
Q Consensus 81 ~~~~~~~--~aDvVIlavp~~~~~~vl~~l~~~~l~~~~--iVvd~~S 124 (335)
+.++.+. ++|+||.|+|.....+....+ ++.|. +|+|.++
T Consensus 83 p~~l~~~~~~vDvV~e~tg~~~s~e~a~~~----l~~GakkVVId~~a 126 (339)
T 2x5j_O 83 LQSLPWRELGVDVVLDCTGVYGSREHGEAH----IAAGAKKVLFSHPG 126 (339)
T ss_dssp GGGCCHHHHTCSEEEECSSSCCSHHHHHHH----HHTTCSEEEESSCC
T ss_pred hHHCcccccCCCEEEECCCccccHHHHHHH----HHcCCCEEEEeccc
Confidence 4443112 799999999988777666554 23343 6888776
No 428
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=96.18 E-value=0.018 Score=55.56 Aligned_cols=92 Identities=14% Similarity=0.131 Sum_probs=64.8
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecCh------------------------hh
Q 044593 29 STSLKIAVIGF-GNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADL------------------------ND 83 (335)
Q Consensus 29 ~~~~kI~IIG~-G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~------------------------~~ 83 (335)
..+.+|.|+|+ |.+|...+..++..|.+|++.+++++..+.++++|....-+. +.
T Consensus 219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (447)
T 4a0s_A 219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKL 298 (447)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEecccccccccccccccccchhhhHHHHH
Confidence 35689999997 999999999999999999999988888888888887532111 11
Q ss_pred H---hhcCCCEEEEecCchhHHHHHhhccccccCCccEEEEcCCC
Q 044593 84 L---CELHPDVVLLSTSILSTQSVLKSIPFQRLKRSTLFVDVLSV 125 (335)
Q Consensus 84 ~---~~~~aDvVIlavp~~~~~~vl~~l~~~~l~~~~iVvd~~Sv 125 (335)
+ ....+|+||-|+........+. .++++..++.+++.
T Consensus 299 v~~~~g~g~Dvvid~~G~~~~~~~~~-----~l~~~G~iv~~G~~ 338 (447)
T 4a0s_A 299 VVEKAGREPDIVFEHTGRVTFGLSVI-----VARRGGTVVTCGSS 338 (447)
T ss_dssp HHHHHSSCCSEEEECSCHHHHHHHHH-----HSCTTCEEEESCCT
T ss_pred HHHHhCCCceEEEECCCchHHHHHHH-----HHhcCCEEEEEecC
Confidence 1 1035888888887654444333 34466677777644
No 429
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=96.16 E-value=0.01 Score=54.61 Aligned_cols=65 Identities=14% Similarity=0.084 Sum_probs=45.4
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHHcCCeEEEEcCCCCcH---H---HHH-hCCCce-------ecChhhHhhcCCCEEEEe
Q 044593 31 SLKIAVIG-FGNFGQFLAKAFARHHHTLLVHSRSDHSP---A---VRQ-QLNAPF-------FADLNDLCELHPDVVLLS 95 (335)
Q Consensus 31 ~~kI~IIG-~G~mG~siA~~L~~~G~~V~~~dr~~~~~---~---~a~-~~g~~~-------~~~~~~~~~~~aDvVIla 95 (335)
+++|.|.| .|.+|+.++..|.+.|++|.+..|+++.. . ... ..++.. ..+..+++ +++|+||-+
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-~~~D~Vih~ 87 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPI-AGCDFVFHV 87 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHH-TTCSEEEEE
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHH-cCCCEEEEe
Confidence 68999999 79999999999999999999888876431 1 111 112221 12334555 689999975
Q ss_pred c
Q 044593 96 T 96 (335)
Q Consensus 96 v 96 (335)
.
T Consensus 88 A 88 (338)
T 2rh8_A 88 A 88 (338)
T ss_dssp S
T ss_pred C
Confidence 4
No 430
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=96.16 E-value=0.014 Score=55.55 Aligned_cols=91 Identities=11% Similarity=0.081 Sum_probs=64.4
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCC-eEEEEcCCC-------CcH-----HHHHhCC-CceecChhhHhhcCCCEEEE
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHH-TLLVHSRSD-------HSP-----AVRQQLN-APFFADLNDLCELHPDVVLL 94 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~-~V~~~dr~~-------~~~-----~~a~~~g-~~~~~~~~~~~~~~aDvVIl 94 (335)
....||.|+|.|..|..+|+.+...|. +|+++|++- ..+ ..+.... .....++.+++ +++|++|=
T Consensus 186 l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~~~~~~~L~eav-~~ADV~IG 264 (398)
T 2a9f_A 186 LDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNREFKSGTLEDAL-EGADIFIG 264 (398)
T ss_dssp TTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTCCCSCCC---CHHHHHSCTTCCCSCSHHH-HTTCSEEE
T ss_pred CCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCCcccCCccccchHHHHHHhhccCcccchhhHHHHh-ccCCEEEe
Confidence 345799999999999999999999998 999999872 111 1222211 11234577877 78999885
Q ss_pred ec-CchhHHHHHhhccccccCCccEEEEcCCC
Q 044593 95 ST-SILSTQSVLKSIPFQRLKRSTLFVDVLSV 125 (335)
Q Consensus 95 av-p~~~~~~vl~~l~~~~l~~~~iVvd~~Sv 125 (335)
+. |.-.++++++.+. ++.+|+++++-
T Consensus 265 ~Sapgl~T~EmVk~Ma-----~~pIIfalsNP 291 (398)
T 2a9f_A 265 VSAPGVLKAEWISKMA-----ARPVIFAMANP 291 (398)
T ss_dssp CCSTTCCCHHHHHTSC-----SSCEEEECCSS
T ss_pred cCCCCCCCHHHHHhhC-----CCCEEEECCCC
Confidence 43 4344678887763 78899999754
No 431
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=96.15 E-value=0.0053 Score=55.97 Aligned_cols=60 Identities=20% Similarity=0.265 Sum_probs=44.1
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhc--CCCEEEEecC
Q 044593 30 TSLKIAVIG-FGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCEL--HPDVVLLSTS 97 (335)
Q Consensus 30 ~~~kI~IIG-~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~--~aDvVIlavp 97 (335)
++|+|.|.| .|.+|+.++..|.+.|++|++++++.. ..+....+..+++ + ++|+||-+..
T Consensus 2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~~-------~D~~d~~~~~~~~-~~~~~d~vih~a~ 64 (321)
T 1e6u_A 2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE-------LNLLDSRAVHDFF-ASERIDQVYLAAA 64 (321)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTT-------CCTTCHHHHHHHH-HHHCCSEEEECCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCcc-------CCccCHHHHHHHH-HhcCCCEEEEcCe
Confidence 467999999 699999999999999999999887642 1122122233444 5 8999998764
No 432
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=96.15 E-value=0.0052 Score=56.72 Aligned_cols=39 Identities=15% Similarity=0.209 Sum_probs=32.6
Q ss_pred cCCCCCeEEEEc-ccHHHHHHHHHHHHcCCeEEEEcCCCC
Q 044593 27 VKSTSLKIAVIG-FGNFGQFLAKAFARHHHTLLVHSRSDH 65 (335)
Q Consensus 27 ~~~~~~kI~IIG-~G~mG~siA~~L~~~G~~V~~~dr~~~ 65 (335)
...++|+|.|.| .|.+|..++..|.+.|++|++++|++.
T Consensus 17 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 56 (333)
T 2q1w_A 17 RGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFAT 56 (333)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS
T ss_pred ecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCc
Confidence 345678999999 699999999999999999999999864
No 433
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=96.12 E-value=0.0033 Score=58.07 Aligned_cols=43 Identities=16% Similarity=0.227 Sum_probs=30.7
Q ss_pred hhhcccCCCCCeEEEEcc-cHHHHHHHHHHHHcC--CeEEEEcCCC
Q 044593 22 LHTQYVKSTSLKIAVIGF-GNFGQFLAKAFARHH--HTLLVHSRSD 64 (335)
Q Consensus 22 ~~~~~~~~~~~kI~IIG~-G~mG~siA~~L~~~G--~~V~~~dr~~ 64 (335)
.++.+..+++|+|.|.|. |.+|+.++..|.+.| ++|++.+++.
T Consensus 15 ~~n~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~ 60 (346)
T 4egb_A 15 TENLYFQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALT 60 (346)
T ss_dssp ---------CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCC
T ss_pred ccccccccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccc
Confidence 344445567889999995 999999999999999 6888888865
No 434
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=96.12 E-value=0.003 Score=59.15 Aligned_cols=65 Identities=15% Similarity=0.104 Sum_probs=45.6
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHHcCC--e-----EEEEcCCCC--cH-HHHHhC---C------CceecChhhHhhcCCC
Q 044593 31 SLKIAVIG-FGNFGQFLAKAFARHHH--T-----LLVHSRSDH--SP-AVRQQL---N------APFFADLNDLCELHPD 90 (335)
Q Consensus 31 ~~kI~IIG-~G~mG~siA~~L~~~G~--~-----V~~~dr~~~--~~-~~a~~~---g------~~~~~~~~~~~~~~aD 90 (335)
.+||+|+| +|.+|++++..|...|. + +.++|+++. .. -.+.++ . +....+..+.+ ++||
T Consensus 3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~~~~~~~~~~~~~-~daD 81 (333)
T 5mdh_A 3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIAF-KDLD 81 (333)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHHHHT-TTCS
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccCCEEEcCCcHHHh-CCCC
Confidence 57999999 79999999999998775 5 999999752 11 112211 1 12234455556 8999
Q ss_pred EEEEec
Q 044593 91 VVLLST 96 (335)
Q Consensus 91 vVIlav 96 (335)
+||++.
T Consensus 82 vVvitA 87 (333)
T 5mdh_A 82 VAILVG 87 (333)
T ss_dssp EEEECC
T ss_pred EEEEeC
Confidence 999975
No 435
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=96.11 E-value=0.014 Score=54.61 Aligned_cols=88 Identities=15% Similarity=0.154 Sum_probs=60.1
Q ss_pred CeEEEEcccHHHHHH-HHHH-HHcCCe-EEEEcCCCC---cHHHHHhCCCceec----ChhhHh--hcCCCEEEEecCch
Q 044593 32 LKIAVIGFGNFGQFL-AKAF-ARHHHT-LLVHSRSDH---SPAVRQQLNAPFFA----DLNDLC--ELHPDVVLLSTSIL 99 (335)
Q Consensus 32 ~kI~IIG~G~mG~si-A~~L-~~~G~~-V~~~dr~~~---~~~~a~~~g~~~~~----~~~~~~--~~~aDvVIlavp~~ 99 (335)
.+|.|+|+|.+|... +..+ +..|.+ |++.+++++ ..+.++++|+...+ +..++. ...+|+||-|+...
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~i~~~~gg~Dvvid~~g~~ 253 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYVDSRQTPVEDVPDVYEQMDFIYEATGFP 253 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEEETTTSCGGGHHHHSCCEEEEEECSCCH
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCcccCCCccCHHHHHHhCCCCCEEEECCCCh
Confidence 799999999999999 8888 778987 999999998 88888888875431 111110 01468888887754
Q ss_pred -hHHHHHhhccccccCCccEEEEcCC
Q 044593 100 -STQSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 100 -~~~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
.....++.+ +++..++.++.
T Consensus 254 ~~~~~~~~~l-----~~~G~iv~~g~ 274 (357)
T 2b5w_A 254 KHAIQSVQAL-----APNGVGALLGV 274 (357)
T ss_dssp HHHHHHHHHE-----EEEEEEEECCC
T ss_pred HHHHHHHHHH-----hcCCEEEEEeC
Confidence 334444333 34455565543
No 436
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=96.10 E-value=0.015 Score=55.22 Aligned_cols=66 Identities=18% Similarity=0.108 Sum_probs=43.5
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHHcCC--e---EEEEcCCCCc----H-HHHHh--CCC-------ceecChhhHhhcCC
Q 044593 30 TSLKIAVIG-FGNFGQFLAKAFARHHH--T---LLVHSRSDHS----P-AVRQQ--LNA-------PFFADLNDLCELHP 89 (335)
Q Consensus 30 ~~~kI~IIG-~G~mG~siA~~L~~~G~--~---V~~~dr~~~~----~-~~a~~--~g~-------~~~~~~~~~~~~~a 89 (335)
..+||+||| +|.+|.+++..+...+. + +.++|.+.+. . -.+.+ .+. ...++..+.+ ++|
T Consensus 31 ~~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v~i~~~~y~~~-~da 109 (375)
T 7mdh_A 31 KLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYEVF-EDV 109 (375)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHT-TTC
T ss_pred CCCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCcEEecCCHHHh-CCC
Confidence 457999999 79999999999998774 3 7776554332 1 11222 121 2233444555 899
Q ss_pred CEEEEec
Q 044593 90 DVVLLST 96 (335)
Q Consensus 90 DvVIlav 96 (335)
|+||++.
T Consensus 110 DvVVita 116 (375)
T 7mdh_A 110 DWALLIG 116 (375)
T ss_dssp SEEEECC
T ss_pred CEEEEcC
Confidence 9999965
No 437
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=96.09 E-value=0.009 Score=58.33 Aligned_cols=88 Identities=11% Similarity=0.070 Sum_probs=66.6
Q ss_pred CCCeEEEEccc----HHHHHHHHHHHHcC-CeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCchhHHHH
Q 044593 30 TSLKIAVIGFG----NFGQFLAKAFARHH-HTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILSTQSV 104 (335)
Q Consensus 30 ~~~kI~IIG~G----~mG~siA~~L~~~G-~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~~~~v 104 (335)
...+|+|||++ .+|..+.+.|.+.| ..|+.+++..... .|+..+.++.++. ...|++++++|...+.++
T Consensus 7 ~p~siAVvGas~~~~~~g~~v~~~l~~~g~~~v~pVnP~~~~i-----~G~~~y~sl~~lp-~~~Dlavi~vp~~~~~~~ 80 (457)
T 2csu_A 7 NPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEV-----QGVKAYKSVKDIP-DEIDLAIIVVPKRFVKDT 80 (457)
T ss_dssp SCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEE-----TTEECBSSTTSCS-SCCSEEEECSCHHHHHHH
T ss_pred CCCeEEEECcCCCCCchHHHHHHHHHHcCCCEEEEECCCCCeE-----CCEeccCCHHHcC-CCCCEEEEecCHHHHHHH
Confidence 35789999987 89999999999885 6777777663322 4777788888876 679999999999999999
Q ss_pred HhhccccccCCccEEEEcCCC
Q 044593 105 LKSIPFQRLKRSTLFVDVLSV 125 (335)
Q Consensus 105 l~~l~~~~l~~~~iVvd~~Sv 125 (335)
+++... ..-..+|+-..+.
T Consensus 81 v~e~~~--~Gi~~vv~~s~G~ 99 (457)
T 2csu_A 81 LIQCGE--KGVKGVVIITAGF 99 (457)
T ss_dssp HHHHHH--HTCCEEEECCCSS
T ss_pred HHHHHH--cCCCEEEEecCCC
Confidence 988742 3334455544444
No 438
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=96.09 E-value=0.01 Score=54.93 Aligned_cols=70 Identities=16% Similarity=0.198 Sum_probs=48.6
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHHcCCeEEEEcCCCCc-HHHHH----------hCCCce----ecC---hhhHhhcC
Q 044593 28 KSTSLKIAVIGF-GNFGQFLAKAFARHHHTLLVHSRSDHS-PAVRQ----------QLNAPF----FAD---LNDLCELH 88 (335)
Q Consensus 28 ~~~~~kI~IIG~-G~mG~siA~~L~~~G~~V~~~dr~~~~-~~~a~----------~~g~~~----~~~---~~~~~~~~ 88 (335)
.+++|+|.|.|. |.+|+.++..|.+.|++|++++|++.. .+... ..++.. ..+ ..+++ ++
T Consensus 24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-~~ 102 (352)
T 1sb8_A 24 PAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNAC-AG 102 (352)
T ss_dssp HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHH-TT
T ss_pred CccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHh-cC
Confidence 356789999995 999999999999999999999997642 11111 123321 122 23445 68
Q ss_pred CCEEEEecCc
Q 044593 89 PDVVLLSTSI 98 (335)
Q Consensus 89 aDvVIlavp~ 98 (335)
+|+||.+...
T Consensus 103 ~d~vih~A~~ 112 (352)
T 1sb8_A 103 VDYVLHQAAL 112 (352)
T ss_dssp CSEEEECCSC
T ss_pred CCEEEECCcc
Confidence 9999987653
No 439
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=96.09 E-value=0.014 Score=55.29 Aligned_cols=90 Identities=12% Similarity=0.124 Sum_probs=62.6
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcC-CeEEEEcCCCCcHHHHHhCCCcee-c-C---hhhH---hh-----cCCCEEEEe
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHH-HTLLVHSRSDHSPAVRQQLNAPFF-A-D---LNDL---CE-----LHPDVVLLS 95 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G-~~V~~~dr~~~~~~~a~~~g~~~~-~-~---~~~~---~~-----~~aDvVIla 95 (335)
.+.+|.|+|+|.+|...+..++..| .+|++.+++++..+.++++|.... + + ..++ +. ..+|+||-|
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~v~~~~~g~g~Dvvid~ 274 (380)
T 1vj0_A 195 AGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEA 274 (380)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHHHTTTSCEEEEEEC
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCCcEEEeccccCcchHHHHHHHHhCCCCCcEEEEC
Confidence 4679999999999999999999999 699999999888888888887521 1 1 1111 10 157888888
Q ss_pred cCch-hHHHHHhhccccccCCccEEEEcCC
Q 044593 96 TSIL-STQSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 96 vp~~-~~~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
+... .+...++.+ +++..++.++.
T Consensus 275 ~g~~~~~~~~~~~l-----~~~G~iv~~G~ 299 (380)
T 1vj0_A 275 TGDSRALLEGSELL-----RRGGFYSVAGV 299 (380)
T ss_dssp SSCTTHHHHHHHHE-----EEEEEEEECCC
T ss_pred CCCHHHHHHHHHHH-----hcCCEEEEEec
Confidence 8753 344444433 34556666654
No 440
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=96.08 E-value=0.0074 Score=55.46 Aligned_cols=89 Identities=10% Similarity=0.181 Sum_probs=61.2
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCcee-cChhhHhhcCCCEEEEecCchhHHHHHhh
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFF-ADLNDLCELHPDVVLLSTSILSTQSVLKS 107 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~-~~~~~~~~~~aDvVIlavp~~~~~~vl~~ 107 (335)
..+.+|.|+|+|.+|...+..++..|.+|++.+ +++..+.++++|.... ++.+++- ..+|+||-|+........+
T Consensus 141 ~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~lGa~~v~~d~~~v~-~g~Dvv~d~~g~~~~~~~~-- 216 (315)
T 3goh_A 141 TKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAKRGVRHLYREPSQVT-QKYFAIFDAVNSQNAAALV-- 216 (315)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHHHTEEEEESSGGGCC-SCEEEEECC-------TTG--
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHHcCCCEEEcCHHHhC-CCccEEEECCCchhHHHHH--
Confidence 357899999999999999999999999999999 8888888888887532 2222222 5789999988765543222
Q ss_pred ccccccCCccEEEEcCC
Q 044593 108 IPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 108 l~~~~l~~~~iVvd~~S 124 (335)
..++++..++.+++
T Consensus 217 ---~~l~~~G~~v~~g~ 230 (315)
T 3goh_A 217 ---PSLKANGHIICIQD 230 (315)
T ss_dssp ---GGEEEEEEEEEECC
T ss_pred ---HHhcCCCEEEEEeC
Confidence 34556667776654
No 441
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=96.06 E-value=0.0064 Score=60.06 Aligned_cols=63 Identities=21% Similarity=0.294 Sum_probs=46.4
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecC
Q 044593 31 SLKIAVIG-FGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTS 97 (335)
Q Consensus 31 ~~kI~IIG-~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp 97 (335)
+|||.|.| .|.+|+.++..|.+.|++|++++|++...+. .... ......+.+ .++|+||-+..
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~~-v~~d--~~~~~~~~l-~~~D~Vih~A~ 210 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPGK-RFWD--PLNPASDLL-DGADVLVHLAG 210 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTTC-EECC--TTSCCTTTT-TTCSEEEECCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCccc-eeec--ccchhHHhc-CCCCEEEECCC
Confidence 78999999 6999999999999999999999998764321 0001 112223444 78999998654
No 442
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=96.06 E-value=0.015 Score=54.02 Aligned_cols=91 Identities=11% Similarity=0.011 Sum_probs=61.6
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHH-hCCCcee---c---ChhhHhh----cCCCEEEEec
Q 044593 29 STSLKIAVIGF-GNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQ-QLNAPFF---A---DLNDLCE----LHPDVVLLST 96 (335)
Q Consensus 29 ~~~~kI~IIG~-G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~-~~g~~~~---~---~~~~~~~----~~aDvVIlav 96 (335)
..+.+|.|+|+ |.+|..++..++..|++|++.+++++..+.++ ++|.... . +..+.+. ..+|+||-++
T Consensus 154 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~ 233 (345)
T 2j3h_A 154 KEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENV 233 (345)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCSEEEETTSCSCSHHHHHHHCTTCEEEEEESS
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEecCCHHHHHHHHHHHhCCCCcEEEECC
Confidence 35678999996 99999999999999999999999987777676 6776421 1 2222220 2478888887
Q ss_pred CchhHHHHHhhccccccCCccEEEEcCC
Q 044593 97 SILSTQSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 97 p~~~~~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
........++. ++++..++.++.
T Consensus 234 g~~~~~~~~~~-----l~~~G~~v~~G~ 256 (345)
T 2j3h_A 234 GGKMLDAVLVN-----MNMHGRIAVCGM 256 (345)
T ss_dssp CHHHHHHHHTT-----EEEEEEEEECCC
T ss_pred CHHHHHHHHHH-----HhcCCEEEEEcc
Confidence 75433333333 345556666553
No 443
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*
Probab=96.02 E-value=0.0035 Score=58.78 Aligned_cols=89 Identities=16% Similarity=0.156 Sum_probs=52.3
Q ss_pred CeEEEEcccHHHHHHHHHHHHcC---CeEEEE-cCCC-CcHHHHH-----------------hC-----CCc--e--ecC
Q 044593 32 LKIAVIGFGNFGQFLAKAFARHH---HTLLVH-SRSD-HSPAVRQ-----------------QL-----NAP--F--FAD 80 (335)
Q Consensus 32 ~kI~IIG~G~mG~siA~~L~~~G---~~V~~~-dr~~-~~~~~a~-----------------~~-----g~~--~--~~~ 80 (335)
+||+|+|+|.+|..+.+.|.+.+ .+|+.+ |... +...... .. |-. . ..+
T Consensus 2 ikVgInG~G~IGr~llR~l~~~~~p~~eivaInd~~~~~~~a~ll~sds~~G~~~~~v~~~~~~~l~v~g~~i~v~~~~d 81 (337)
T 1rm4_O 2 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDRN 81 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSCSEEEEEEECTTCHHHHHHHHHCCTTTCSCSSCEEECTTSEEEETTEEEEEECCSC
T ss_pred eEEEEECCCHHHHHHHHHHHhCCCCCeEEEEEEcCCCHHHHHHHhcccccCCCccceeEEecCCeEEECCeEEEEEecCC
Confidence 58999999999999999998863 355443 3211 1111000 00 111 1 123
Q ss_pred hhhHhhc--CCCEEEEecCchhHHHHHhhccccccCCccEEEEcCC
Q 044593 81 LNDLCEL--HPDVVLLSTSILSTQSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 81 ~~~~~~~--~aDvVIlavp~~~~~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
+.++.+. ++|+||.|+|.....+..... ++.|+.++|+++
T Consensus 82 p~~i~w~~~gvDiV~eatg~~~s~e~a~~~----l~~Gak~V~iSa 123 (337)
T 1rm4_O 82 PVNLPWGDMGIDLVIEGTGVFVDRDGAGKH----LQAGAKKVLITA 123 (337)
T ss_dssp GGGSCHHHHTCCEEEECSSSCCBHHHHHHH----HHTTCSEEEESS
T ss_pred hhhCcccccCCCEEEECCCchhhHHHHHHH----HHcCCEEEEECC
Confidence 4333113 799999999988766666543 345666666654
No 444
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=96.02 E-value=0.011 Score=54.65 Aligned_cols=92 Identities=12% Similarity=0.016 Sum_probs=64.3
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHHcCCeEEEEcCCCCcHHHH-HhCCCcee-----cChhhHh----hcCCCEEEEecC
Q 044593 29 STSLKIAVIGF-GNFGQFLAKAFARHHHTLLVHSRSDHSPAVR-QQLNAPFF-----ADLNDLC----ELHPDVVLLSTS 97 (335)
Q Consensus 29 ~~~~kI~IIG~-G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a-~~~g~~~~-----~~~~~~~----~~~aDvVIlavp 97 (335)
..+.+|.|+|+ |.+|...+..++..|.+|++.+++++..+.+ +++|.... .+..+.+ ....|+||-|+.
T Consensus 148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 227 (336)
T 4b7c_A 148 KNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKRECPKGIDVFFDNVG 227 (336)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSEEEETTTSCHHHHHHHHCTTCEEEEEESSC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCEEEECCCHHHHHHHHHhcCCCceEEEECCC
Confidence 35789999998 9999999999999999999999998877777 77887421 1111111 025788888887
Q ss_pred chhHHHHHhhccccccCCccEEEEcCCC
Q 044593 98 ILSTQSVLKSIPFQRLKRSTLFVDVLSV 125 (335)
Q Consensus 98 ~~~~~~vl~~l~~~~l~~~~iVvd~~Sv 125 (335)
.......++. ++++..++.++..
T Consensus 228 ~~~~~~~~~~-----l~~~G~iv~~G~~ 250 (336)
T 4b7c_A 228 GEILDTVLTR-----IAFKARIVLCGAI 250 (336)
T ss_dssp HHHHHHHHTT-----EEEEEEEEECCCG
T ss_pred cchHHHHHHH-----HhhCCEEEEEeec
Confidence 6444444433 4456667776643
No 445
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=96.00 E-value=0.017 Score=54.96 Aligned_cols=71 Identities=10% Similarity=0.053 Sum_probs=53.3
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCC-eEEEEcCCCCcHHHHHhCCCceec----Ch-hhHhh-----cCCCEEEEecC
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHH-TLLVHSRSDHSPAVRQQLNAPFFA----DL-NDLCE-----LHPDVVLLSTS 97 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~-~V~~~dr~~~~~~~a~~~g~~~~~----~~-~~~~~-----~~aDvVIlavp 97 (335)
..+.+|.|+|+|.+|...+..++..|. +|++.+++++..+.++++|+.... +. .+.+. ..+|+||-|+.
T Consensus 184 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~i~~~~~~~~~~~~~~~~~g~g~Dvvid~~g 263 (398)
T 2dph_A 184 KPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFETIDLRNSAPLRDQIDQILGKPEVDCGVDAVG 263 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTTCEEEETTSSSCHHHHHHHHHSSSCEEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEcCCCcchHHHHHHHHhCCCCCCEEEECCC
Confidence 356799999999999999998888898 899999999888888888874221 11 11110 15788888887
Q ss_pred ch
Q 044593 98 IL 99 (335)
Q Consensus 98 ~~ 99 (335)
..
T Consensus 264 ~~ 265 (398)
T 2dph_A 264 FE 265 (398)
T ss_dssp TT
T ss_pred Cc
Confidence 54
No 446
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=95.98 E-value=0.012 Score=55.06 Aligned_cols=90 Identities=10% Similarity=0.037 Sum_probs=64.5
Q ss_pred CCCeEEEE-cccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCcee-----cChhhHh----hcCCCEEEEecCch
Q 044593 30 TSLKIAVI-GFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFF-----ADLNDLC----ELHPDVVLLSTSIL 99 (335)
Q Consensus 30 ~~~kI~II-G~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~-----~~~~~~~----~~~aDvVIlavp~~ 99 (335)
.+.+|.|+ |.|.+|...+..++..|.+|++.+++++..+.++++|.... .+..+.+ ....|+||-|+...
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~ 246 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKRGINYRSEDFAAVIKAETGQGVDIILDMIGAA 246 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHSSCEEEEEESCCGG
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEeCCchHHHHHHHHHhCCCceEEEECCCHH
Confidence 56799999 58999999999999999999999999988887888776421 1121211 02588999888876
Q ss_pred hHHHHHhhccccccCCccEEEEcCC
Q 044593 100 STQSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 100 ~~~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
.....+..+ +++..++.++.
T Consensus 247 ~~~~~~~~l-----~~~G~iv~~g~ 266 (353)
T 4dup_A 247 YFERNIASL-----AKDGCLSIIAF 266 (353)
T ss_dssp GHHHHHHTE-----EEEEEEEECCC
T ss_pred HHHHHHHHh-----ccCCEEEEEEe
Confidence 555555444 34556666654
No 447
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=95.97 E-value=0.012 Score=55.11 Aligned_cols=35 Identities=14% Similarity=0.357 Sum_probs=31.9
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCC-eEEEEcCCC
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHHH-TLLVHSRSD 64 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G~-~V~~~dr~~ 64 (335)
+..||.|||+|.+|+.++..|...|. +++++|.+.
T Consensus 33 ~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~ 68 (340)
T 3rui_A 33 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 68 (340)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred hCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCE
Confidence 46799999999999999999999997 899999864
No 448
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=95.96 E-value=0.021 Score=53.13 Aligned_cols=91 Identities=12% Similarity=0.084 Sum_probs=64.0
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHc-CCeEEEEcCCCCcHHHHHhCCCceec----ChhhHhh-----cCCCEEEEecCc
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARH-HHTLLVHSRSDHSPAVRQQLNAPFFA----DLNDLCE-----LHPDVVLLSTSI 98 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~-G~~V~~~dr~~~~~~~a~~~g~~~~~----~~~~~~~-----~~aDvVIlavp~ 98 (335)
....+|.|+|+|.+|...+..++.. |.+|++.|++++..+.++++|....- +..+.+. ..+|+||-|+..
T Consensus 170 ~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~v~~~t~g~g~d~v~d~~G~ 249 (345)
T 3jv7_A 170 GPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGAGAADAIRELTGGQGATAVFDFVGA 249 (345)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEECSTTHHHHHHHHHGGGCEEEEEESSCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCCCcHHHHHHHHhCCCCCeEEEECCCC
Confidence 3568999999999999988888877 68999999999888889998875321 1111110 268888888887
Q ss_pred h-hHHHHHhhccccccCCccEEEEcCC
Q 044593 99 L-STQSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 99 ~-~~~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
. .+...++.+ +++..++.++.
T Consensus 250 ~~~~~~~~~~l-----~~~G~iv~~G~ 271 (345)
T 3jv7_A 250 QSTIDTAQQVV-----AVDGHISVVGI 271 (345)
T ss_dssp HHHHHHHHHHE-----EEEEEEEECSC
T ss_pred HHHHHHHHHHH-----hcCCEEEEECC
Confidence 6 344444433 35556666653
No 449
>2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli}
Probab=95.95 E-value=0.014 Score=57.38 Aligned_cols=65 Identities=17% Similarity=0.198 Sum_probs=49.5
Q ss_pred CCCeEEEEcccHHHHH-HHHHHHHcCCeEEEEcCCCCc-HHHHHhCCCcee--cChhhHhhcCCCEEEEec
Q 044593 30 TSLKIAVIGFGNFGQF-LAKAFARHHHTLLVHSRSDHS-PAVRQQLNAPFF--ADLNDLCELHPDVVLLST 96 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~s-iA~~L~~~G~~V~~~dr~~~~-~~~a~~~g~~~~--~~~~~~~~~~aDvVIlav 96 (335)
..++|.|||.|..|.+ +|+.|.+.|++|.++|..... .+...+.|+... .+.. .+ .++|+||+.-
T Consensus 18 ~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~g~~~~-~~-~~a~~vv~s~ 86 (491)
T 2f00_A 18 RVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNPVTQQLMNLGATIYFNHRPE-NV-RDASVVVVSS 86 (491)
T ss_dssp TCCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCEEESSCCGG-GG-TTCSEEEECT
T ss_pred cCCEEEEEEcCHHHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHCCCEEECCCCHH-Hc-CCCCEEEECC
Confidence 3578999999999998 999999999999999987643 234556787653 2222 34 6799999863
No 450
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.95 E-value=0.012 Score=54.27 Aligned_cols=90 Identities=16% Similarity=0.060 Sum_probs=59.4
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceec-----Chhh-Hh----hcCCCEEEEecCc
Q 044593 30 TSLKIAVIG-FGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFA-----DLND-LC----ELHPDVVLLSTSI 98 (335)
Q Consensus 30 ~~~kI~IIG-~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~-----~~~~-~~----~~~aDvVIlavp~ 98 (335)
.+.+|.|+| .|.+|..++..++..|++|++.+++++..+.+++.|....- +..+ +. ....|++|-|+..
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~~g~ 219 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGR 219 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEECSCG
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEECCCccHHHHHHHHhCCCCceEEEECCch
Confidence 467899999 79999999999999999999999998777666666653211 1111 11 0146777777764
Q ss_pred hhHHHHHhhccccccCCccEEEEcCC
Q 044593 99 LSTQSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 99 ~~~~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
......++.+ +++..++.+++
T Consensus 220 ~~~~~~~~~l-----~~~G~iv~~g~ 240 (327)
T 1qor_A 220 DTWERSLDCL-----QRRGLMVSFGN 240 (327)
T ss_dssp GGHHHHHHTE-----EEEEEEEECCC
T ss_pred HHHHHHHHHh-----cCCCEEEEEec
Confidence 4444444433 34445555554
No 451
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=95.94 E-value=0.0082 Score=56.43 Aligned_cols=69 Identities=17% Similarity=0.123 Sum_probs=47.8
Q ss_pred CCCCeEEEEc-ccHHHHHHHHHHHHcC-CeEEEEcCCCCcH-HHHH-hCCCce----ecCh---hhHhhcCCCEEEEecC
Q 044593 29 STSLKIAVIG-FGNFGQFLAKAFARHH-HTLLVHSRSDHSP-AVRQ-QLNAPF----FADL---NDLCELHPDVVLLSTS 97 (335)
Q Consensus 29 ~~~~kI~IIG-~G~mG~siA~~L~~~G-~~V~~~dr~~~~~-~~a~-~~g~~~----~~~~---~~~~~~~aDvVIlavp 97 (335)
.++|+|.|.| .|.+|..++..|.+.| ++|++++|++... +... ..++.. ..+. .+++ +++|+||.+..
T Consensus 30 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~-~~~d~Vih~A~ 108 (377)
T 2q1s_A 30 LANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQ-DEYDYVFHLAT 108 (377)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCC-SCCSEEEECCC
T ss_pred hCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHh-hCCCEEEECCC
Confidence 4578999999 5999999999999999 9999999986532 1111 112221 1222 2334 68999998765
Q ss_pred c
Q 044593 98 I 98 (335)
Q Consensus 98 ~ 98 (335)
.
T Consensus 109 ~ 109 (377)
T 2q1s_A 109 Y 109 (377)
T ss_dssp C
T ss_pred c
Confidence 3
No 452
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=95.93 E-value=0.018 Score=53.17 Aligned_cols=87 Identities=11% Similarity=0.072 Sum_probs=60.9
Q ss_pred eEEEEcc-cHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhH----h----hcCCCEEEEecCchhHHH
Q 044593 33 KIAVIGF-GNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDL----C----ELHPDVVLLSTSILSTQS 103 (335)
Q Consensus 33 kI~IIG~-G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~----~----~~~aDvVIlavp~~~~~~ 103 (335)
+|.|+|+ |.+|...+..++..|.+|++.+++++..+.++++|....-+..+. . ...+|+||-|+.......
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~ 232 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGASEVISREDVYDGTLKALSKQQWQGAVDPVGGKQLAS 232 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCSEEEEHHHHCSSCCCSSCCCCEEEEEESCCTHHHHH
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEECCCchHHHHHHhhcCCccEEEECCcHHHHHH
Confidence 7999997 999999999999999999999999888888888887532111111 1 024788888887654444
Q ss_pred HHhhccccccCCccEEEEcCC
Q 044593 104 VLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 104 vl~~l~~~~l~~~~iVvd~~S 124 (335)
.++. ++++..++.++.
T Consensus 233 ~~~~-----l~~~G~iv~~G~ 248 (330)
T 1tt7_A 233 LLSK-----IQYGGSVAVSGL 248 (330)
T ss_dssp HHTT-----EEEEEEEEECCC
T ss_pred HHHh-----hcCCCEEEEEec
Confidence 4433 345556666653
No 453
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=95.93 E-value=0.0091 Score=54.77 Aligned_cols=37 Identities=19% Similarity=0.302 Sum_probs=33.0
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHHcCCeEEEEcCCCCc
Q 044593 30 TSLKIAVIGF-GNFGQFLAKAFARHHHTLLVHSRSDHS 66 (335)
Q Consensus 30 ~~~kI~IIG~-G~mG~siA~~L~~~G~~V~~~dr~~~~ 66 (335)
++|+|.|.|. |.+|+.++..|.+.|++|++++|++..
T Consensus 2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~ 39 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGE 39 (345)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCST
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcc
Confidence 4689999995 999999999999999999999998754
No 454
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=95.93 E-value=0.017 Score=53.24 Aligned_cols=86 Identities=13% Similarity=0.081 Sum_probs=57.0
Q ss_pred eEEEEcc-cHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCcee---cCh-hhHh----hcCCCEEEEecCchhHHH
Q 044593 33 KIAVIGF-GNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFF---ADL-NDLC----ELHPDVVLLSTSILSTQS 103 (335)
Q Consensus 33 kI~IIG~-G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~---~~~-~~~~----~~~aDvVIlavp~~~~~~ 103 (335)
+|.|+|+ |.+|...+..++..|.+|++.+++++..+.++++|.... .+. .+.. ...+|+||-|+.......
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~ 231 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDPVGGRTLAT 231 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSEEEECC---------CCSCCEEEEEECSTTTTHHH
T ss_pred eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcEEEecCCcHHHHHHHhcCCcccEEEECCcHHHHHH
Confidence 7999997 999999999999999999999999888888888886421 111 1111 024677777776544444
Q ss_pred HHhhccccccCCccEEEEcC
Q 044593 104 VLKSIPFQRLKRSTLFVDVL 123 (335)
Q Consensus 104 vl~~l~~~~l~~~~iVvd~~ 123 (335)
.++.+ +++..++.++
T Consensus 232 ~~~~l-----~~~G~~v~~G 246 (328)
T 1xa0_A 232 VLSRM-----RYGGAVAVSG 246 (328)
T ss_dssp HHHTE-----EEEEEEEECS
T ss_pred HHHhh-----ccCCEEEEEe
Confidence 44333 3444555554
No 455
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=95.91 E-value=0.013 Score=55.25 Aligned_cols=90 Identities=14% Similarity=0.008 Sum_probs=61.9
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCC-eEEEEcCCCCcHHHHHhCCCcee-----cChhhHhh----cCCCEEEEecCch
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHHH-TLLVHSRSDHSPAVRQQLNAPFF-----ADLNDLCE----LHPDVVLLSTSIL 99 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G~-~V~~~dr~~~~~~~a~~~g~~~~-----~~~~~~~~----~~aDvVIlavp~~ 99 (335)
.+.+|.|+|+|.+|...+..++..|. +|++.+++++..+.++++|.... .+..+.+. ..+|+||-++...
T Consensus 190 ~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~~~gg~D~vid~~g~~ 269 (371)
T 1f8f_A 190 PASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFALESTGSP 269 (371)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTSCEEEEEECSCCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCEEecCCccCHHHHHHHhcCCCCcEEEECCCCH
Confidence 46799999999999999999888998 69999999888888888887421 12211110 1478888888753
Q ss_pred -hHHHHHhhccccccCCccEEEEcCC
Q 044593 100 -STQSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 100 -~~~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
.....++. ++++..++.++.
T Consensus 270 ~~~~~~~~~-----l~~~G~iv~~G~ 290 (371)
T 1f8f_A 270 EILKQGVDA-----LGILGKIAVVGA 290 (371)
T ss_dssp HHHHHHHHT-----EEEEEEEEECCC
T ss_pred HHHHHHHHH-----HhcCCEEEEeCC
Confidence 33444433 335556666653
No 456
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=95.91 E-value=0.012 Score=54.88 Aligned_cols=68 Identities=19% Similarity=0.298 Sum_probs=48.1
Q ss_pred CCCCeEEEEc-ccHHHHHHHHHHHHc-CC-eEEEEcCCCCcHHHH-Hh---CCCce----ecCh---hhHhhcCCCEEEE
Q 044593 29 STSLKIAVIG-FGNFGQFLAKAFARH-HH-TLLVHSRSDHSPAVR-QQ---LNAPF----FADL---NDLCELHPDVVLL 94 (335)
Q Consensus 29 ~~~~kI~IIG-~G~mG~siA~~L~~~-G~-~V~~~dr~~~~~~~a-~~---~g~~~----~~~~---~~~~~~~aDvVIl 94 (335)
+++++|.|.| .|.+|..+++.|.+. |+ +|++++|++...... .. .++.. ..+. .+++ +++|+||-
T Consensus 19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~-~~~D~Vih 97 (344)
T 2gn4_A 19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYAL-EGVDICIH 97 (344)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHT-TTCSEEEE
T ss_pred hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHH-hcCCEEEE
Confidence 4568999999 699999999999999 97 999999987543322 11 23321 1222 3344 68999998
Q ss_pred ecC
Q 044593 95 STS 97 (335)
Q Consensus 95 avp 97 (335)
+..
T Consensus 98 ~Aa 100 (344)
T 2gn4_A 98 AAA 100 (344)
T ss_dssp CCC
T ss_pred CCC
Confidence 764
No 457
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=95.90 E-value=0.011 Score=54.45 Aligned_cols=67 Identities=16% Similarity=0.165 Sum_probs=45.7
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHHc--CCeEEEEcCCCC--cHHHHHh---CCCce----ecC---hhhHhhcCCCEEEEe
Q 044593 31 SLKIAVIG-FGNFGQFLAKAFARH--HHTLLVHSRSDH--SPAVRQQ---LNAPF----FAD---LNDLCELHPDVVLLS 95 (335)
Q Consensus 31 ~~kI~IIG-~G~mG~siA~~L~~~--G~~V~~~dr~~~--~~~~a~~---~g~~~----~~~---~~~~~~~~aDvVIla 95 (335)
+|+|.|.| .|.+|+.++..|.+. |++|++++|++. ..+...+ .++.. ..+ ..+++ +++|+||-+
T Consensus 4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-~~~d~vih~ 82 (348)
T 1oc2_A 4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLA-AKADAIVHY 82 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHH-TTCSEEEEC
T ss_pred CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHh-hcCCEEEEC
Confidence 57999999 699999999999998 899999999752 1111111 12221 122 23445 688999987
Q ss_pred cCc
Q 044593 96 TSI 98 (335)
Q Consensus 96 vp~ 98 (335)
...
T Consensus 83 A~~ 85 (348)
T 1oc2_A 83 AAE 85 (348)
T ss_dssp CSC
T ss_pred Ccc
Confidence 653
No 458
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=95.89 E-value=0.014 Score=54.72 Aligned_cols=90 Identities=14% Similarity=0.067 Sum_probs=62.1
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCcee---c--ChhhHhh-----cCCCEEEEecCc
Q 044593 30 TSLKIAVIGF-GNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFF---A--DLNDLCE-----LHPDVVLLSTSI 98 (335)
Q Consensus 30 ~~~kI~IIG~-G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~---~--~~~~~~~-----~~aDvVIlavp~ 98 (335)
.+.+|.|+|+ |.+|..++..++..|++|++.+++++..+.+++.|.... . +..+.+. ...|+||-|+..
T Consensus 170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~G~ 249 (351)
T 1yb5_A 170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLAN 249 (351)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSTTHHHHHHHHHCTTCEEEEEESCHH
T ss_pred CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHcCCCEEEeCCCchHHHHHHHHcCCCCcEEEEECCCh
Confidence 4679999997 999999999999999999999999887777888776421 1 1111110 157888888765
Q ss_pred hhHHHHHhhccccccCCccEEEEcCC
Q 044593 99 LSTQSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 99 ~~~~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
......++. ++++..++.++.
T Consensus 250 ~~~~~~~~~-----l~~~G~iv~~g~ 270 (351)
T 1yb5_A 250 VNLSKDLSL-----LSHGGRVIVVGS 270 (351)
T ss_dssp HHHHHHHHH-----EEEEEEEEECCC
T ss_pred HHHHHHHHh-----ccCCCEEEEEec
Confidence 444433333 445556666653
No 459
>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A*
Probab=95.89 E-value=0.014 Score=57.08 Aligned_cols=65 Identities=18% Similarity=0.173 Sum_probs=49.6
Q ss_pred CCCeEEEEcccHHHHH-HHHHHHHcCCeEEEEcCCCCc-HHHHHhCCCcee--cChhhHhhcCCCEEEEec
Q 044593 30 TSLKIAVIGFGNFGQF-LAKAFARHHHTLLVHSRSDHS-PAVRQQLNAPFF--ADLNDLCELHPDVVLLST 96 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~s-iA~~L~~~G~~V~~~dr~~~~-~~~a~~~g~~~~--~~~~~~~~~~aDvVIlav 96 (335)
..++|.|||.|..|.+ +|+.|.+.|++|.++|..... .+...+.|+... .+.. .+ .++|+||+.-
T Consensus 17 ~~~~i~viG~G~sG~s~~A~~l~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~g~~~~-~~-~~a~~vv~s~ 85 (475)
T 1p3d_A 17 RVQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAGAKIYIGHAEE-HI-EGASVVVVSS 85 (475)
T ss_dssp TCCEEEEETTTSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHHTTCEEEESCCGG-GG-TTCSEEEECT
T ss_pred cCCEEEEEeecHHHHHHHHHHHHhCCCEEEEECCCCCHHHHHHHhCCCEEECCCCHH-Hc-CCCCEEEECC
Confidence 3578999999999998 999999999999999987653 234556787653 2222 34 6799999863
No 460
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=95.88 E-value=0.015 Score=53.31 Aligned_cols=36 Identities=22% Similarity=0.436 Sum_probs=32.5
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCC-eEEEEcCCC
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHH-TLLVHSRSD 64 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~-~V~~~dr~~ 64 (335)
.+..||.|||+|.+|+.++.+|...|. +++++|.+.
T Consensus 34 L~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 34 IRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp GGGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred HhCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 356799999999999999999999997 899999885
No 461
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=95.87 E-value=0.0054 Score=55.07 Aligned_cols=57 Identities=9% Similarity=0.283 Sum_probs=42.1
Q ss_pred CeEEEEc-ccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhc--CCCEEEEecC
Q 044593 32 LKIAVIG-FGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCEL--HPDVVLLSTS 97 (335)
Q Consensus 32 ~kI~IIG-~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~--~aDvVIlavp 97 (335)
|||.|.| .|.+|+.++..|.+.|++|++.+|.+- .+....+..+++ + ++|+||.+..
T Consensus 6 m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~--------D~~d~~~~~~~~-~~~~~d~vi~~a~ 65 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELNPEEYDIYPFDKKLL--------DITNISQVQQVV-QEIRPHIIIHCAA 65 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSCTTTEEEEEECTTTS--------CTTCHHHHHHHH-HHHCCSEEEECCC
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCEEEEeccccc--------CCCCHHHHHHHH-HhcCCCEEEECCc
Confidence 5899999 699999999999999999999999532 111112233344 3 6999998753
No 462
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=95.86 E-value=0.0085 Score=58.03 Aligned_cols=65 Identities=15% Similarity=0.156 Sum_probs=48.8
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcH--HHHHhCCCcee-cC-hhhHhhcCCCEEEEec
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSP--AVRQQLNAPFF-AD-LNDLCELHPDVVLLST 96 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~--~~a~~~g~~~~-~~-~~~~~~~~aDvVIlav 96 (335)
+.+||.|||.|..|.+.|+.|.+.|++|+++|...... .... .|+... .. ..+.+ .++|+||++.
T Consensus 4 ~~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~~~~~l~-~G~~~~~g~~~~~~~-~~~d~vV~s~ 72 (439)
T 2x5o_A 4 QGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLP-EAVERHTGSLNDEWL-MAADLIVASP 72 (439)
T ss_dssp TTCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCTTGGGSC-TTSCEEESSCCHHHH-HTCSEEEECT
T ss_pred CCCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcchhHHhh-CCCEEEECCCcHHHh-ccCCEEEeCC
Confidence 46799999999999999999999999999999875432 2233 677653 11 23444 5799999975
No 463
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=95.86 E-value=0.025 Score=50.00 Aligned_cols=40 Identities=10% Similarity=0.141 Sum_probs=35.0
Q ss_pred CCCCeEEEEc-ccHHHHHHHHHHHHcCCeEEEEcCCCCcHH
Q 044593 29 STSLKIAVIG-FGNFGQFLAKAFARHHHTLLVHSRSDHSPA 68 (335)
Q Consensus 29 ~~~~kI~IIG-~G~mG~siA~~L~~~G~~V~~~dr~~~~~~ 68 (335)
+++++|.|.| .|.||..+++.|.+.|++|++.+|+++..+
T Consensus 10 ~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~ 50 (265)
T 2o23_A 10 VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGE 50 (265)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHH
Confidence 4567899998 699999999999999999999999986553
No 464
>2g82_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; G3PDH, glycolysis, oxidoreductase, NAD, rossmann fold; HET: NAD PGE; 1.65A {Thermus aquaticus} SCOP: c.2.1.3 d.81.1.1 PDB: 1cer_O* 1vc2_A*
Probab=95.83 E-value=0.0039 Score=58.28 Aligned_cols=89 Identities=15% Similarity=0.208 Sum_probs=55.2
Q ss_pred CeEEEEcccHHHHHHHHHHHHcCCeEEEE-cC-CCCcHHHHHh----CC-------------------Ccee--cChhhH
Q 044593 32 LKIAVIGFGNFGQFLAKAFARHHHTLLVH-SR-SDHSPAVRQQ----LN-------------------APFF--ADLNDL 84 (335)
Q Consensus 32 ~kI~IIG~G~mG~siA~~L~~~G~~V~~~-dr-~~~~~~~a~~----~g-------------------~~~~--~~~~~~ 84 (335)
+||+|+|+|.+|..+.+.|.++.++|+++ |. +.+......+ .| +... .++.++
T Consensus 1 ikVgInG~G~IGr~vlr~l~~~~~evvaind~~~~~~~a~ll~~ds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~dp~~l 80 (331)
T 2g82_O 1 MKVGINGFGRIGRQVFRILHSRGVEVALINDLTDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDPKEI 80 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSGGGS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCEEEEEecCCCHHHHhHhhhccccCCCCCceEEEcCCEEEECCEEEEEEecCChhhC
Confidence 48999999999999999988777787754 42 1111111111 11 1111 134433
Q ss_pred hhc--CCCEEEEecCchhHHHHHhhccccccCCcc--EEEEcCC
Q 044593 85 CEL--HPDVVLLSTSILSTQSVLKSIPFQRLKRST--LFVDVLS 124 (335)
Q Consensus 85 ~~~--~aDvVIlavp~~~~~~vl~~l~~~~l~~~~--iVvd~~S 124 (335)
.+. ++|+||.|+|.....+..... ++.|+ +|+|..+
T Consensus 81 ~w~~~gvDiV~estG~~~s~e~a~~~----l~aGakkvVIsaps 120 (331)
T 2g82_O 81 PWAEAGVGVVIESTGVFTDADKAKAH----LEGGAKKVIITAPA 120 (331)
T ss_dssp CTTTTTEEEEEECSSSCCBHHHHTHH----HHTTCSEEEESSCC
T ss_pred cccccCCCEEEECCCchhhHHHHHHH----HHCCCCEEEECCCC
Confidence 212 689999999988777666544 33455 7777654
No 465
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=95.82 E-value=0.0088 Score=55.51 Aligned_cols=38 Identities=18% Similarity=0.098 Sum_probs=34.0
Q ss_pred CCCCeEEEEc-ccHHHHHHHHHHHHcCCeEEEEcCCCCc
Q 044593 29 STSLKIAVIG-FGNFGQFLAKAFARHHHTLLVHSRSDHS 66 (335)
Q Consensus 29 ~~~~kI~IIG-~G~mG~siA~~L~~~G~~V~~~dr~~~~ 66 (335)
+++|+|.|.| .|.+|+.++..|.+.|++|++++|++..
T Consensus 7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 45 (357)
T 1rkx_A 7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPT 45 (357)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSS
T ss_pred hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcc
Confidence 3568999999 6999999999999999999999998754
No 466
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=95.82 E-value=0.014 Score=58.16 Aligned_cols=72 Identities=11% Similarity=0.102 Sum_probs=54.8
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhC-CCce----ecChhhHh---hcCCCEEEEecCch
Q 044593 28 KSTSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQL-NAPF----FADLNDLC---ELHPDVVLLSTSIL 99 (335)
Q Consensus 28 ~~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~-g~~~----~~~~~~~~---~~~aDvVIlavp~~ 99 (335)
....++|.|+|+|.+|..++..|.+.|++|+++|.+++..+.+.+. |+.. .++.+.+. ..++|.+|+ ++.+
T Consensus 124 ~~~~~hviI~G~g~~g~~la~~L~~~~~~vvvid~~~~~~~~~~~~~~~~~i~Gd~~~~~~L~~a~i~~a~~vi~-t~~D 202 (565)
T 4gx0_A 124 DDTRGHILIFGIDPITRTLIRKLESRNHLFVVVTDNYDQALHLEEQEGFKVVYGSPTDAHVLAGLRVAAARSIIA-NLSD 202 (565)
T ss_dssp TTCCSCEEEESCCHHHHHHHHHTTTTTCCEEEEESCHHHHHHHHHSCSSEEEESCTTCHHHHHHTTGGGCSEEEE-CSCH
T ss_pred cccCCeEEEECCChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCCeEEEeCCCCHHHHHhcCcccCCEEEE-eCCc
Confidence 3456789999999999999999999999999999999887767776 7743 22222221 268999988 5555
Q ss_pred h
Q 044593 100 S 100 (335)
Q Consensus 100 ~ 100 (335)
.
T Consensus 203 ~ 203 (565)
T 4gx0_A 203 P 203 (565)
T ss_dssp H
T ss_pred H
Confidence 4
No 467
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=95.81 E-value=0.0079 Score=57.42 Aligned_cols=78 Identities=17% Similarity=0.254 Sum_probs=58.6
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHHcCC---eEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecCchh-----
Q 044593 30 TSLKIAVIGF-GNFGQFLAKAFARHHH---TLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTSILS----- 100 (335)
Q Consensus 30 ~~~kI~IIG~-G~mG~siA~~L~~~G~---~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp~~~----- 100 (335)
...||.|||. |..|..-+..+...|. +|+++|+++.. .|-. .+++ .++|+||-|+....
T Consensus 213 ~~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~~~------~g~~----~~~i--~~aDivIn~vlig~~aP~L 280 (394)
T 2qrj_A 213 RKPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKETS------RGGP----FDEI--PQADIFINCIYLSKPIAPF 280 (394)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHHHT------TCSC----CTHH--HHSSEEEECCCCCSSCCCS
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeeccccc------cCCc----hhhH--hhCCEEEECcCcCCCCCcc
Confidence 3569999998 9999999999999997 89999987521 1322 1344 57999999997532
Q ss_pred -HHHHHhhcccccc-CCccEEEEcCC
Q 044593 101 -TQSVLKSIPFQRL-KRSTLFVDVLS 124 (335)
Q Consensus 101 -~~~vl~~l~~~~l-~~~~iVvd~~S 124 (335)
+.+.++. + +++.+|+|++.
T Consensus 281 vt~e~v~~-----m~k~gsVIVDVA~ 301 (394)
T 2qrj_A 281 TNMEKLNN-----PNRRLRTVVDVSA 301 (394)
T ss_dssp CCHHHHCC-----TTCCCCEEEETTC
T ss_pred cCHHHHhc-----CcCCCeEEEEEec
Confidence 3444433 4 79999999964
No 468
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=95.80 E-value=0.0087 Score=53.50 Aligned_cols=65 Identities=17% Similarity=0.310 Sum_probs=46.4
Q ss_pred eEEEEcc-cHHHHHHHHHHHHc--CCeEEEEcCCCCcHHHHHhCCCce----ecC---hhhHhhcCCCEEEEecCc
Q 044593 33 KIAVIGF-GNFGQFLAKAFARH--HHTLLVHSRSDHSPAVRQQLNAPF----FAD---LNDLCELHPDVVLLSTSI 98 (335)
Q Consensus 33 kI~IIG~-G~mG~siA~~L~~~--G~~V~~~dr~~~~~~~a~~~g~~~----~~~---~~~~~~~~aDvVIlavp~ 98 (335)
||.|.|. |.+|+.++..|.+. |++|++.+|++.........++.. ..+ ..+++ +++|+||.+...
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~-~~~d~vi~~a~~ 75 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSAL-QGVEKLLLISSS 75 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEEECCTTCHHHHHHHT-TTCSEEEECC--
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEEEcCCCCHHHHHHHH-hCCCEEEEeCCC
Confidence 5889995 99999999999998 999999999876544333344432 122 23444 689999987653
No 469
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=95.80 E-value=0.019 Score=50.48 Aligned_cols=40 Identities=20% Similarity=0.260 Sum_probs=34.3
Q ss_pred CCCCeEEEEc-ccHHHHHHHHHHHHcCCeEEEEcCC-CCcHH
Q 044593 29 STSLKIAVIG-FGNFGQFLAKAFARHHHTLLVHSRS-DHSPA 68 (335)
Q Consensus 29 ~~~~kI~IIG-~G~mG~siA~~L~~~G~~V~~~dr~-~~~~~ 68 (335)
+++++|.|.| .|.||..+++.|.+.|++|++.+|+ ++..+
T Consensus 5 l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~ 46 (258)
T 3afn_B 5 LKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANID 46 (258)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHH
Confidence 4567898998 6999999999999999999999998 65443
No 470
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=95.79 E-value=0.019 Score=52.77 Aligned_cols=66 Identities=15% Similarity=0.113 Sum_probs=45.1
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHH---hC-----CCc-------eecChhhHhhcCCCEEE
Q 044593 30 TSLKIAVIG-FGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQ---QL-----NAP-------FFADLNDLCELHPDVVL 93 (335)
Q Consensus 30 ~~~kI~IIG-~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~---~~-----g~~-------~~~~~~~~~~~~aDvVI 93 (335)
++++|.|.| .|.+|+.++..|.+.|++|++.+|++....... +. ++. ...+..+++ +++|+||
T Consensus 4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-~~~d~Vi 82 (337)
T 2c29_D 4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAI-KGCTGVF 82 (337)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHH-TTCSEEE
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHH-cCCCEEE
Confidence 467899999 799999999999999999999988876432111 11 111 112334555 6899999
Q ss_pred Eec
Q 044593 94 LST 96 (335)
Q Consensus 94 lav 96 (335)
-+.
T Consensus 83 h~A 85 (337)
T 2c29_D 83 HVA 85 (337)
T ss_dssp ECC
T ss_pred Eec
Confidence 754
No 471
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=95.78 E-value=0.015 Score=53.41 Aligned_cols=87 Identities=11% Similarity=0.037 Sum_probs=61.0
Q ss_pred eEEEEcc-cHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhh------HhhcCCCEEEEecCchhHHHHH
Q 044593 33 KIAVIGF-GNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLND------LCELHPDVVLLSTSILSTQSVL 105 (335)
Q Consensus 33 kI~IIG~-G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~------~~~~~aDvVIlavp~~~~~~vl 105 (335)
+|.|+|+ |.+|...+..++..|.+|++.+++++..+.++++|....-+..+ +.....|++|-|+........+
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~ 228 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKSLGANRILSRDEFAESRPLEKQLWAGAIDTVGDKVLAKVL 228 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTCSEEEEGGGSSCCCSSCCCCEEEEEESSCHHHHHHHH
T ss_pred eEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEecCCHHHHHhhcCCCccEEEECCCcHHHHHHH
Confidence 4999997 99999999999999999999999998888888888753211111 1113578888887755444444
Q ss_pred hhccccccCCccEEEEcCC
Q 044593 106 KSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 106 ~~l~~~~l~~~~iVvd~~S 124 (335)
+. ++++..++.++.
T Consensus 229 ~~-----l~~~G~iv~~G~ 242 (324)
T 3nx4_A 229 AQ-----MNYGGCVAACGL 242 (324)
T ss_dssp HT-----EEEEEEEEECCC
T ss_pred HH-----HhcCCEEEEEec
Confidence 33 345566666654
No 472
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=95.78 E-value=0.0097 Score=56.41 Aligned_cols=39 Identities=23% Similarity=0.069 Sum_probs=33.1
Q ss_pred cCCCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCC
Q 044593 27 VKSTSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDH 65 (335)
Q Consensus 27 ~~~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~ 65 (335)
..++.++|.|||.|..|.+.|..|++.|++|+++|+++.
T Consensus 19 ~~~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~ 57 (407)
T 3rp8_A 19 YFQGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKE 57 (407)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSC
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 344568999999999999999999999999999999864
No 473
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=95.77 E-value=0.011 Score=53.42 Aligned_cols=64 Identities=20% Similarity=0.332 Sum_probs=45.5
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHHc--CCeEEEEcCCCCcHHHHHhCCCce----ecCh---hhHhhc--CCCEEEEecC
Q 044593 31 SLKIAVIGF-GNFGQFLAKAFARH--HHTLLVHSRSDHSPAVRQQLNAPF----FADL---NDLCEL--HPDVVLLSTS 97 (335)
Q Consensus 31 ~~kI~IIG~-G~mG~siA~~L~~~--G~~V~~~dr~~~~~~~a~~~g~~~----~~~~---~~~~~~--~aDvVIlavp 97 (335)
+|+|.|.|. |.+|+.++..|.+. |++|++.+|++....... ++.. ..+. .+++ + ++|+||-+..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~--~~~~~~~D~~d~~~~~~~~-~~~~~d~vih~a~ 77 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVVN--SGPFEVVNALDFNQIEHLV-EVHKITDIYLMAA 77 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCHHHH--SSCEEECCTTCHHHHHHHH-HHTTCCEEEECCC
T ss_pred CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCccccccC--CCceEEecCCCHHHHHHHH-hhcCCCEEEECCc
Confidence 478999995 99999999999998 899999999875533222 2221 1222 2333 4 7999998764
No 474
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=95.75 E-value=0.017 Score=53.79 Aligned_cols=90 Identities=10% Similarity=0.132 Sum_probs=63.5
Q ss_pred CCCeEEEE-cccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceec----ChhhHh----hcCCCEEEEecCchh
Q 044593 30 TSLKIAVI-GFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFA----DLNDLC----ELHPDVVLLSTSILS 100 (335)
Q Consensus 30 ~~~kI~II-G~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~----~~~~~~----~~~aDvVIlavp~~~ 100 (335)
.+.+|.|+ |.|.+|...+..++..|.+|++.+++++..+.++++|....- +..+.+ ....|+||-|+....
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~g~Dvv~d~~g~~~ 229 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGADIVLNHKESLLNQFKTQGIELVDYVFCTFNTDM 229 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTCSEEECTTSCHHHHHHHHTCCCEEEEEESSCHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEECCccHHHHHHHhCCCCccEEEECCCchH
Confidence 56799999 699999999999999999999999998888888888875321 221111 025899999887654
Q ss_pred H-HHHHhhccccccCCccEEEEcCC
Q 044593 101 T-QSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 101 ~-~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
. ...++.+ +++..++.+++
T Consensus 230 ~~~~~~~~l-----~~~G~iv~~~~ 249 (346)
T 3fbg_A 230 YYDDMIQLV-----KPRGHIATIVA 249 (346)
T ss_dssp HHHHHHHHE-----EEEEEEEESSC
T ss_pred HHHHHHHHh-----ccCCEEEEECC
Confidence 3 4444433 35556666654
No 475
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=95.75 E-value=0.017 Score=53.98 Aligned_cols=90 Identities=10% Similarity=0.001 Sum_probs=62.0
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCcee---c--Chhh-Hhh----cCCCEEEEecCc
Q 044593 30 TSLKIAVIG-FGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFF---A--DLND-LCE----LHPDVVLLSTSI 98 (335)
Q Consensus 30 ~~~kI~IIG-~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~---~--~~~~-~~~----~~aDvVIlavp~ 98 (335)
.+.+|.|+| .|.+|..++..++..|++|++.+++++..+.+++.|.... . +..+ +.. ...|++|-|+..
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~G~ 241 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGG 241 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESSCG
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCChHHHHHHHHHhcCCCceEEEECCCc
Confidence 467899999 7999999999999999999999999877777777676421 1 1111 110 247888888876
Q ss_pred hhHHHHHhhccccccCCccEEEEcCC
Q 044593 99 LSTQSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 99 ~~~~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
......++.+ +++..++.++.
T Consensus 242 ~~~~~~~~~l-----~~~G~iv~~G~ 262 (354)
T 2j8z_A 242 SYWEKNVNCL-----ALDGRWVLYGL 262 (354)
T ss_dssp GGHHHHHHHE-----EEEEEEEECCC
T ss_pred hHHHHHHHhc-----cCCCEEEEEec
Confidence 6555544433 34556666653
No 476
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=95.74 E-value=0.035 Score=54.11 Aligned_cols=70 Identities=10% Similarity=-0.072 Sum_probs=51.1
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCCc-H-HHHHhCCCcee---cChhhHhhcCCCEEEEecCchh
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDHS-P-AVRQQLNAPFF---ADLNDLCELHPDVVLLSTSILS 100 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~~-~-~~a~~~g~~~~---~~~~~~~~~~aDvVIlavp~~~ 100 (335)
.++++|.|||.|.+|.+-++.|.+.|.+|+++|++... . +.+.+.++... ....+ + .++|+||.|+....
T Consensus 10 l~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~~~~~~~l~~~~~i~~~~~~~~~~~-l-~~~~lVi~at~~~~ 84 (457)
T 1pjq_A 10 LRDRDCLIVGGGDVAERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDETL-L-DSCWLAIAATDDDT 84 (457)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCGGG-G-TTCSEEEECCSCHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCCCHHHHHHHhcCCEEEEECCCCccc-c-CCccEEEEcCCCHH
Confidence 45789999999999999999999999999999986543 2 22222344332 12233 3 68999999987764
No 477
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=95.72 E-value=0.0047 Score=54.23 Aligned_cols=35 Identities=29% Similarity=0.378 Sum_probs=31.6
Q ss_pred CeEEEEc-ccHHHHHHHHHHHHcCCeEEEEcCCCCc
Q 044593 32 LKIAVIG-FGNFGQFLAKAFARHHHTLLVHSRSDHS 66 (335)
Q Consensus 32 ~kI~IIG-~G~mG~siA~~L~~~G~~V~~~dr~~~~ 66 (335)
++|.|.| .|.+|..+++.|.+.|++|++.+|+++.
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~ 37 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQAD 37 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhH
Confidence 4799998 5999999999999999999999998754
No 478
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=95.72 E-value=0.0063 Score=55.70 Aligned_cols=66 Identities=17% Similarity=0.192 Sum_probs=44.8
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCce----ecCh---hhHhhc--CCCEEEEecC
Q 044593 31 SLKIAVIG-FGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPF----FADL---NDLCEL--HPDVVLLSTS 97 (335)
Q Consensus 31 ~~kI~IIG-~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~----~~~~---~~~~~~--~aDvVIlavp 97 (335)
||+|.|.| .|.+|+.++..|.+.|++|++++|+..........++.. ..+. .+++ + ++|+||-+..
T Consensus 1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~-~~~~~d~vih~a~ 76 (330)
T 2c20_A 1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAITEGAKFYNGDLRDKAFLRDVF-TQENIEAVMHFAA 76 (330)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCTTSEEEECCTTCHHHHHHHH-HHSCEEEEEECCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchhhcCCCcEEEECCCCCHHHHHHHH-hhcCCCEEEECCc
Confidence 47899998 699999999999999999999998764321111113321 1222 2333 4 7999998764
No 479
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=95.71 E-value=0.022 Score=53.70 Aligned_cols=35 Identities=14% Similarity=0.394 Sum_probs=32.0
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCC-eEEEEcCCC
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHHH-TLLVHSRSD 64 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G~-~V~~~dr~~ 64 (335)
+..+|.|||+|.+|+.++.+|...|. +++++|.+.
T Consensus 117 ~~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~ 152 (353)
T 3h5n_A 117 KNAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQ 152 (353)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCB
T ss_pred hCCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCc
Confidence 46799999999999999999999997 899999875
No 480
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=95.71 E-value=0.015 Score=53.26 Aligned_cols=69 Identities=22% Similarity=0.294 Sum_probs=45.0
Q ss_pred CCCCeEEEEc-ccHHHHHHHHHHHHcC--CeEEEEcCCCC--cHHHHHh----CCCce----ecC---hhhHhhcCCCEE
Q 044593 29 STSLKIAVIG-FGNFGQFLAKAFARHH--HTLLVHSRSDH--SPAVRQQ----LNAPF----FAD---LNDLCELHPDVV 92 (335)
Q Consensus 29 ~~~~kI~IIG-~G~mG~siA~~L~~~G--~~V~~~dr~~~--~~~~a~~----~g~~~----~~~---~~~~~~~~aDvV 92 (335)
|+.|||.|.| .|.+|+.++..|.+.| ++|++.+|++. ..+...+ .++.. ..+ ..+++ .++|+|
T Consensus 1 M~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-~~~d~v 79 (336)
T 2hun_A 1 MHSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELV-RKVDGV 79 (336)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHH-HTCSEE
T ss_pred CCCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHh-hCCCEE
Confidence 3468999999 6999999999999986 89999998752 1221111 12211 122 23344 679999
Q ss_pred EEecCc
Q 044593 93 LLSTSI 98 (335)
Q Consensus 93 Ilavp~ 98 (335)
|-+...
T Consensus 80 ih~A~~ 85 (336)
T 2hun_A 80 VHLAAE 85 (336)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 987643
No 481
>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}
Probab=95.70 E-value=0.0043 Score=58.05 Aligned_cols=86 Identities=21% Similarity=0.171 Sum_probs=54.5
Q ss_pred CeEEEEc-ccHHHHHHHHHHHHcCCeE---EEE-cCCCC--cHHHHHhCCCceec-ChhhHhhcCCCEEEEecCchhHHH
Q 044593 32 LKIAVIG-FGNFGQFLAKAFARHHHTL---LVH-SRSDH--SPAVRQQLNAPFFA-DLNDLCELHPDVVLLSTSILSTQS 103 (335)
Q Consensus 32 ~kI~IIG-~G~mG~siA~~L~~~G~~V---~~~-dr~~~--~~~~a~~~g~~~~~-~~~~~~~~~aDvVIlavp~~~~~~ 103 (335)
|||+|+| .|.+|..+.+.|.+.++++ ..+ ++... ... .....+.... +..+ + ++|+||.|+|.....+
T Consensus 1 mkVaI~GAtG~iG~~llr~L~~~~~~~~~l~~~~s~~~~g~~l~-~~g~~i~v~~~~~~~--~-~~DvV~~a~g~~~s~~ 76 (331)
T 2yv3_A 1 MRVAVVGATGAVGREILKVLEARNFPLSELRLYASPRSAGVRLA-FRGEEIPVEPLPEGP--L-PVDLVLASAGGGISRA 76 (331)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCCEEEECGGGSSCEEE-ETTEEEEEEECCSSC--C-CCSEEEECSHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEeeccccCCCEEE-EcCceEEEEeCChhh--c-CCCEEEECCCccchHH
Confidence 6899999 9999999999998777642 222 21110 010 0000111111 2221 2 6999999999888777
Q ss_pred HHhhccccccCCccEEEEcCCC
Q 044593 104 VLKSIPFQRLKRSTLFVDVLSV 125 (335)
Q Consensus 104 vl~~l~~~~l~~~~iVvd~~Sv 125 (335)
....+ ++.|+.|+|.++-
T Consensus 77 ~a~~~----~~~G~~vId~s~~ 94 (331)
T 2yv3_A 77 KALVW----AEGGALVVDNSSA 94 (331)
T ss_dssp HHHHH----HHTTCEEEECSSS
T ss_pred HHHHH----HHCCCEEEECCCc
Confidence 77655 4568899999875
No 482
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=95.70 E-value=0.018 Score=53.51 Aligned_cols=89 Identities=15% Similarity=0.083 Sum_probs=61.3
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCC-eEEEEcCCCCcHHHHHhCCCcee-----cChhhHh----hcCCCEEEEecCc-
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHHH-TLLVHSRSDHSPAVRQQLNAPFF-----ADLNDLC----ELHPDVVLLSTSI- 98 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G~-~V~~~dr~~~~~~~a~~~g~~~~-----~~~~~~~----~~~aDvVIlavp~- 98 (335)
.+.+|.|+|+|.+|...+..++..|. +|++.+++++..+.++++ .... .+..+.+ ...+|+||-++..
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~v~~~~~~~~~~~~~~~~~~g~D~vid~~g~~ 242 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVNPLEEDLLEVVRRVTGSGVEVLLEFSGNE 242 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSEEECTTTSCHHHHHHHHHSSCEEEEEECSCCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHhccCcCccCHHHHHHHhcCCCCCEEEECCCCH
Confidence 56799999999999999999999999 999999998777666665 4321 1222221 0258999999876
Q ss_pred hhHHHHHhhccccccCCccEEEEcCC
Q 044593 99 LSTQSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 99 ~~~~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
..+...++.+ +++..++.++.
T Consensus 243 ~~~~~~~~~l-----~~~G~iv~~g~ 263 (343)
T 2dq4_A 243 AAIHQGLMAL-----IPGGEARILGI 263 (343)
T ss_dssp HHHHHHHHHE-----EEEEEEEECCC
T ss_pred HHHHHHHHHH-----hcCCEEEEEec
Confidence 3344444443 34556666654
No 483
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=95.69 E-value=0.0074 Score=51.26 Aligned_cols=34 Identities=21% Similarity=0.444 Sum_probs=30.9
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHHcCCeEEEEcCCCC
Q 044593 31 SLKIAVIG-FGNFGQFLAKAFARHHHTLLVHSRSDH 65 (335)
Q Consensus 31 ~~kI~IIG-~G~mG~siA~~L~~~G~~V~~~dr~~~ 65 (335)
+|||.|.| .|.+|..+++.|. .|++|++.+|++.
T Consensus 3 kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~ 37 (202)
T 3d7l_A 3 AMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG 37 (202)
T ss_dssp SCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS
T ss_pred CcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc
Confidence 46899998 6999999999999 9999999999865
No 484
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=95.69 E-value=0.016 Score=58.18 Aligned_cols=35 Identities=14% Similarity=0.357 Sum_probs=32.0
Q ss_pred CCCeEEEEcccHHHHHHHHHHHHcCC-eEEEEcCCC
Q 044593 30 TSLKIAVIGFGNFGQFLAKAFARHHH-TLLVHSRSD 64 (335)
Q Consensus 30 ~~~kI~IIG~G~mG~siA~~L~~~G~-~V~~~dr~~ 64 (335)
+..||.|||+|.+|+.+|..|...|. +++++|.+.
T Consensus 325 ~~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~ 360 (615)
T 4gsl_A 325 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 360 (615)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCC
Confidence 46799999999999999999999997 899999875
No 485
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=95.67 E-value=0.011 Score=53.14 Aligned_cols=61 Identities=18% Similarity=0.304 Sum_probs=44.0
Q ss_pred CCCCeEEEEc-ccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceecChhhHhhc--CCCEEEEecCc
Q 044593 29 STSLKIAVIG-FGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFADLNDLCEL--HPDVVLLSTSI 98 (335)
Q Consensus 29 ~~~~kI~IIG-~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~--~aDvVIlavp~ 98 (335)
...++|.|.| .|.+|+.++..|.+.|++|++++|+.- .+....+..+++ + ++|+||-+...
T Consensus 10 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~--------Dl~d~~~~~~~~-~~~~~d~vih~A~~ 73 (292)
T 1vl0_A 10 HHHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQDL--------DITNVLAVNKFF-NEKKPNVVINCAAH 73 (292)
T ss_dssp --CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTTC--------CTTCHHHHHHHH-HHHCCSEEEECCCC
T ss_pred cccceEEEECCCChHHHHHHHHHHhCCCeEEeccCccC--------CCCCHHHHHHHH-HhcCCCEEEECCcc
Confidence 3568999998 699999999999999999999998731 111112233444 4 69999987643
No 486
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=95.66 E-value=0.014 Score=52.87 Aligned_cols=64 Identities=19% Similarity=0.173 Sum_probs=44.0
Q ss_pred CeEEEEcc-cHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCce----ecC--hhhHhhcCCCEEEEecC
Q 044593 32 LKIAVIGF-GNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPF----FAD--LNDLCELHPDVVLLSTS 97 (335)
Q Consensus 32 ~kI~IIG~-G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~----~~~--~~~~~~~~aDvVIlavp 97 (335)
|||.|.|. |.+|+.++..|.+.|++|++++|++.........++.. ..+ ..+++ .. |+||-+..
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~-d~vih~A~ 71 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFVNPSAELHVRDLKDYSWGAGI-KG-DVVFHFAA 71 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGSCTTSEEECCCTTSTTTTTTC-CC-SEEEECCS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhcCCCceEEECccccHHHHhhc-CC-CEEEECCC
Confidence 68999995 99999999999999999999999875432222223321 111 22333 34 99987654
No 487
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=95.64 E-value=0.019 Score=53.42 Aligned_cols=90 Identities=13% Similarity=0.104 Sum_probs=62.0
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCceec---ChhhHhh-----cCCCEEEEecCchh
Q 044593 30 TSLKIAVIG-FGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFFA---DLNDLCE-----LHPDVVLLSTSILS 100 (335)
Q Consensus 30 ~~~kI~IIG-~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~~---~~~~~~~-----~~aDvVIlavp~~~ 100 (335)
.+.+|.|+| .|.+|...+..++..|.+|++. ++++..+.++++|..... +..+.+. ..+|+||-|+....
T Consensus 150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~lGa~~i~~~~~~~~~~~~~~~~~g~D~vid~~g~~~ 228 (343)
T 3gaz_A 150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRDLGATPIDASREPEDYAAEHTAGQGFDLVYDTLGGPV 228 (343)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHHTSEEEETTSCHHHHHHHHHTTSCEEEEEESSCTHH
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHcCCCEeccCCCHHHHHHHHhcCCCceEEEECCCcHH
Confidence 568999999 7999999999999999999988 777777777777765321 1111110 25888888888654
Q ss_pred HHHHHhhccccccCCccEEEEcCCC
Q 044593 101 TQSVLKSIPFQRLKRSTLFVDVLSV 125 (335)
Q Consensus 101 ~~~vl~~l~~~~l~~~~iVvd~~Sv 125 (335)
....+..+ +++..++.++..
T Consensus 229 ~~~~~~~l-----~~~G~iv~~g~~ 248 (343)
T 3gaz_A 229 LDASFSAV-----KRFGHVVSCLGW 248 (343)
T ss_dssp HHHHHHHE-----EEEEEEEESCCC
T ss_pred HHHHHHHH-----hcCCeEEEEccc
Confidence 55544443 345566666543
No 488
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=95.64 E-value=0.015 Score=53.85 Aligned_cols=64 Identities=23% Similarity=0.362 Sum_probs=44.1
Q ss_pred CeEEEEcc-cHHHHHHHHHHHHcCC--eEEEEcC--CCCcHH-----H--HH-hCC--Ccee--cC-hhhHhhcCCCEEE
Q 044593 32 LKIAVIGF-GNFGQFLAKAFARHHH--TLLVHSR--SDHSPA-----V--RQ-QLN--APFF--AD-LNDLCELHPDVVL 93 (335)
Q Consensus 32 ~kI~IIG~-G~mG~siA~~L~~~G~--~V~~~dr--~~~~~~-----~--a~-~~g--~~~~--~~-~~~~~~~~aDvVI 93 (335)
|||+|+|+ |.+|+.++..|...|+ ++.++|+ +++..+ . .. ..+ +... ++ +.+.+ +++|+||
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~l~~al-~gaD~Vi 79 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRII-DESDVVI 79 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGG-TTCSEEE
T ss_pred CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCCcchHHHh-CCCCEEE
Confidence 69999998 9999999999998885 6899998 643221 1 11 111 1221 22 35556 8999999
Q ss_pred Eec
Q 044593 94 LST 96 (335)
Q Consensus 94 lav 96 (335)
++.
T Consensus 80 ~~A 82 (313)
T 1hye_A 80 ITS 82 (313)
T ss_dssp ECC
T ss_pred ECC
Confidence 976
No 489
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=95.63 E-value=0.027 Score=53.44 Aligned_cols=48 Identities=15% Similarity=0.050 Sum_probs=42.2
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCC-eEEEEcCCCCcHHHHHhCCCc
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHH-TLLVHSRSDHSPAVRQQLNAP 76 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~-~V~~~dr~~~~~~~a~~~g~~ 76 (335)
..+.+|.|+|+|.+|...+..++..|. .|++.|++++..+.++++|+.
T Consensus 184 ~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lGa~ 232 (398)
T 1kol_A 184 GPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFE 232 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCE
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcCCc
Confidence 356799999999999999999888998 799999999888888888874
No 490
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=95.63 E-value=0.016 Score=53.89 Aligned_cols=90 Identities=12% Similarity=0.022 Sum_probs=59.7
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCcee---c--ChhhHhh-----cCCCEEEEecCc
Q 044593 30 TSLKIAVIGF-GNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFF---A--DLNDLCE-----LHPDVVLLSTSI 98 (335)
Q Consensus 30 ~~~kI~IIG~-G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~---~--~~~~~~~-----~~aDvVIlavp~ 98 (335)
...+|.|+|. |.+|...+..++..|++|++.+++++..+.+++.|.... . +..+.+. ...|+||-++..
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 245 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRLTGGKGADKVVDHTGA 245 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTSTTHHHHHHHHTTTTCEEEEEESSCS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHhCCCCceEEEECCCH
Confidence 5689999998 999999999999999999999999877776766665321 1 1111110 146777777764
Q ss_pred hhHHHHHhhccccccCCccEEEEcCC
Q 044593 99 LSTQSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 99 ~~~~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
......++.+ +++..++.+++
T Consensus 246 ~~~~~~~~~l-----~~~G~~v~~g~ 266 (343)
T 2eih_A 246 LYFEGVIKAT-----ANGGRIAIAGA 266 (343)
T ss_dssp SSHHHHHHHE-----EEEEEEEESSC
T ss_pred HHHHHHHHhh-----ccCCEEEEEec
Confidence 4444444433 23445555554
No 491
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=95.62 E-value=0.018 Score=55.93 Aligned_cols=48 Identities=10% Similarity=0.174 Sum_probs=41.9
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCc
Q 044593 29 STSLKIAVIGF-GNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAP 76 (335)
Q Consensus 29 ~~~~kI~IIG~-G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~ 76 (335)
..+.+|.|+|+ |.+|...+..++..|.+|++.+++++..+.++++|+.
T Consensus 227 ~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~lGa~ 275 (456)
T 3krt_A 227 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGAE 275 (456)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHhhCCc
Confidence 35678999997 9999999999999999999999888888888888874
No 492
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=95.60 E-value=0.0042 Score=55.60 Aligned_cols=63 Identities=22% Similarity=0.263 Sum_probs=45.5
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCc----eecC---hhhHhhcCCCEEEEec
Q 044593 30 TSLKIAVIG-FGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAP----FFAD---LNDLCELHPDVVLLST 96 (335)
Q Consensus 30 ~~~kI~IIG-~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~----~~~~---~~~~~~~~aDvVIlav 96 (335)
++++|.|.| .|.||..++..|.+.|++|++.+|++.... ..++. ..++ ..+++ +++|+||.+.
T Consensus 2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~---~~~~~~~~~Dl~d~~~~~~~~-~~~D~vi~~A 72 (267)
T 3rft_A 2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA---GPNEECVQCDLADANAVNAMV-AGCDGIVHLG 72 (267)
T ss_dssp CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC---CTTEEEEECCTTCHHHHHHHH-TTCSEEEECC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc---CCCCEEEEcCCCCHHHHHHHH-cCCCEEEECC
Confidence 456789999 799999999999999999999999975432 11221 1122 33445 6899999875
No 493
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=95.60 E-value=0.021 Score=53.12 Aligned_cols=38 Identities=21% Similarity=0.253 Sum_probs=33.7
Q ss_pred CCCCCeEEEEc-ccHHHHHHHHHHHH--cCCeEEEEcCCCC
Q 044593 28 KSTSLKIAVIG-FGNFGQFLAKAFAR--HHHTLLVHSRSDH 65 (335)
Q Consensus 28 ~~~~~kI~IIG-~G~mG~siA~~L~~--~G~~V~~~dr~~~ 65 (335)
.+++|+|.|.| .|.+|+.++..|.+ .|++|++++|++.
T Consensus 7 ~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~ 47 (362)
T 3sxp_A 7 ELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRS 47 (362)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCC
T ss_pred hcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCc
Confidence 35678999998 69999999999999 8999999999764
No 494
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=95.59 E-value=0.022 Score=50.99 Aligned_cols=41 Identities=20% Similarity=0.257 Sum_probs=35.3
Q ss_pred cCCCCCeEEEEc-ccHHHHHHHHHHHHcCCeEEEEcCCCCcH
Q 044593 27 VKSTSLKIAVIG-FGNFGQFLAKAFARHHHTLLVHSRSDHSP 67 (335)
Q Consensus 27 ~~~~~~kI~IIG-~G~mG~siA~~L~~~G~~V~~~dr~~~~~ 67 (335)
..+++++|.|.| .|.||..+++.|.+.|++|++.+|+++..
T Consensus 27 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~ 68 (272)
T 1yb1_A 27 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGL 68 (272)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHH
Confidence 445678899998 69999999999999999999999987543
No 495
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=95.58 E-value=0.015 Score=53.77 Aligned_cols=90 Identities=12% Similarity=0.117 Sum_probs=61.0
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCcee---c--Chhh-H---h-hcCCCEEEEecCc
Q 044593 30 TSLKIAVIGF-GNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFF---A--DLND-L---C-ELHPDVVLLSTSI 98 (335)
Q Consensus 30 ~~~kI~IIG~-G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~---~--~~~~-~---~-~~~aDvVIlavp~ 98 (335)
.+.+|.|+|. |.+|..++..++..|++|++.+++++..+.+++.|.... . +..+ + . ....|++|-|+..
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~i~~~~~~~~~d~vi~~~g~ 224 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIGK 224 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEEEECSCT
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCCHHHHHHHHHHhCCCCCeEEEECCcH
Confidence 4678999994 999999999999999999999999877776766665421 1 1111 1 1 0247888888876
Q ss_pred hhHHHHHhhccccccCCccEEEEcCC
Q 044593 99 LSTQSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 99 ~~~~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
......++.+ +++..++.++.
T Consensus 225 ~~~~~~~~~l-----~~~G~iv~~g~ 245 (333)
T 1wly_A 225 DTLQKSLDCL-----RPRGMCAAYGH 245 (333)
T ss_dssp TTHHHHHHTE-----EEEEEEEECCC
T ss_pred HHHHHHHHhh-----ccCCEEEEEec
Confidence 4444444433 34556666654
No 496
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=95.58 E-value=0.018 Score=50.18 Aligned_cols=41 Identities=12% Similarity=0.204 Sum_probs=34.7
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHHcC--CeEEEEcCCCCcHHHH
Q 044593 30 TSLKIAVIG-FGNFGQFLAKAFARHH--HTLLVHSRSDHSPAVR 70 (335)
Q Consensus 30 ~~~kI~IIG-~G~mG~siA~~L~~~G--~~V~~~dr~~~~~~~a 70 (335)
++++|.|.| .|.||..+++.|.+.| ++|++.+|+++..+..
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l 45 (250)
T 1yo6_A 2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATEL 45 (250)
T ss_dssp CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHH
T ss_pred CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHH
Confidence 457888998 6999999999999999 9999999987654433
No 497
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=95.57 E-value=0.045 Score=50.64 Aligned_cols=92 Identities=10% Similarity=0.083 Sum_probs=62.3
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHHcCCe-EEEEcCCCCcHHHHHhCCCcee-----cChhhHh-----hcCCCEEEEecC
Q 044593 29 STSLKIAVIGFGNFGQFLAKAFARHHHT-LLVHSRSDHSPAVRQQLNAPFF-----ADLNDLC-----ELHPDVVLLSTS 97 (335)
Q Consensus 29 ~~~~kI~IIG~G~mG~siA~~L~~~G~~-V~~~dr~~~~~~~a~~~g~~~~-----~~~~~~~-----~~~aDvVIlavp 97 (335)
..+.+|.|+|+|.+|...+..++..|.. +++.|++++..+.++++|.... .+..+.. ....|+|+-++.
T Consensus 159 ~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~~~g~d~v~d~~G 238 (346)
T 4a2c_A 159 CENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRFNQLILETAG 238 (346)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHGGGCSSEEEEECSC
T ss_pred CCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCCCCCHHHHHHhhcccCCccccccccc
Confidence 3568999999999999999999999975 5788999888888999997532 1222211 035788888886
Q ss_pred chh-HHHHHhhccccccCCccEEEEcCCC
Q 044593 98 ILS-TQSVLKSIPFQRLKRSTLFVDVLSV 125 (335)
Q Consensus 98 ~~~-~~~vl~~l~~~~l~~~~iVvd~~Sv 125 (335)
... +...++- ++++..++-++..
T Consensus 239 ~~~~~~~~~~~-----l~~~G~~v~~g~~ 262 (346)
T 4a2c_A 239 VPQTVELAVEI-----AGPHAQLALVGTL 262 (346)
T ss_dssp SHHHHHHHHHH-----CCTTCEEEECCCC
T ss_pred ccchhhhhhhe-----ecCCeEEEEEecc
Confidence 543 3333333 3455556555543
No 498
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=95.55 E-value=0.01 Score=55.53 Aligned_cols=53 Identities=17% Similarity=0.318 Sum_probs=41.3
Q ss_pred CeEEEEc-ccHHHHHHHHHHHHcCC-eEEEEcCCCCcHHHHHhCCCceecChhhHhhcCCCEEEEecC
Q 044593 32 LKIAVIG-FGNFGQFLAKAFARHHH-TLLVHSRSDHSPAVRQQLNAPFFADLNDLCELHPDVVLLSTS 97 (335)
Q Consensus 32 ~kI~IIG-~G~mG~siA~~L~~~G~-~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~aDvVIlavp 97 (335)
|||.|.| .|.+|+.++..|.+.|+ +|+..|++.+. .++.+++ +++|+||-+..
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~~d~------------~~l~~~~-~~~d~Vih~a~ 55 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQTKE------------EELESAL-LKADFIVHLAG 55 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTTCCH------------HHHHHHH-HHCSEEEECCC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCCCCH------------HHHHHHh-ccCCEEEECCc
Confidence 7899999 79999999999999999 99999995111 1123444 57899998754
No 499
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=95.51 E-value=0.045 Score=50.90 Aligned_cols=88 Identities=10% Similarity=0.160 Sum_probs=61.1
Q ss_pred CeEEEE-cccHHHHHHHHHHHHcCCeEEEEcCCCCcHHHHHhCCCcee-----cChhhHhh-----cCCCEEEEecCchh
Q 044593 32 LKIAVI-GFGNFGQFLAKAFARHHHTLLVHSRSDHSPAVRQQLNAPFF-----ADLNDLCE-----LHPDVVLLSTSILS 100 (335)
Q Consensus 32 ~kI~II-G~G~mG~siA~~L~~~G~~V~~~dr~~~~~~~a~~~g~~~~-----~~~~~~~~-----~~aDvVIlavp~~~ 100 (335)
.+|.|. |.|.+|...+..++..|.+|++.+++++..+.++++|.... .+..+.+. ..+|+||-|+....
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~~~g~D~vid~~g~~~ 245 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAAHVLNEKAPDFEATLREVMKAEQPRIFLDAVTGPL 245 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTCSEEEETTSTTHHHHHHHHHHHHCCCEEEESSCHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCcHHHHHHHHHHhcCCCCcEEEECCCChh
Confidence 456555 79999999999999999999999999988888888886421 11111110 26888888887665
Q ss_pred HHHHHhhccccccCCccEEEEcCC
Q 044593 101 TQSVLKSIPFQRLKRSTLFVDVLS 124 (335)
Q Consensus 101 ~~~vl~~l~~~~l~~~~iVvd~~S 124 (335)
....++. ++++..++.++.
T Consensus 246 ~~~~~~~-----l~~~G~iv~~G~ 264 (349)
T 3pi7_A 246 ASAIFNA-----MPKRARWIIYGR 264 (349)
T ss_dssp HHHHHHH-----SCTTCEEEECCC
T ss_pred HHHHHhh-----hcCCCEEEEEec
Confidence 5444433 445666666653
No 500
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=95.48 E-value=0.019 Score=54.86 Aligned_cols=44 Identities=27% Similarity=0.301 Sum_probs=33.6
Q ss_pred chhhcccCCCCCeEEEEcccHHHHHHHHHHHHcCCeEEEEcCCCC
Q 044593 21 QLHTQYVKSTSLKIAVIGFGNFGQFLAKAFARHHHTLLVHSRSDH 65 (335)
Q Consensus 21 ~~~~~~~~~~~~kI~IIG~G~mG~siA~~L~~~G~~V~~~dr~~~ 65 (335)
++..+...|.++||+|+|.|..|..++.++++.|++|+++| ++.
T Consensus 14 ~~~~~~~mm~~~~I~ilGgG~lg~~l~~aa~~lG~~v~~~d-~~~ 57 (403)
T 3k5i_A 14 NLYFQGHMWNSRKVGVLGGGQLGRMLVESANRLNIQVNVLD-ADN 57 (403)
T ss_dssp -------CCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEE-STT
T ss_pred ceeEeccCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEE-CCC
Confidence 45566565668899999999999999999999999999999 653
Done!