Query 044596
Match_columns 644
No_of_seqs 193 out of 293
Neff 4.1
Searched_HMMs 13730
Date Mon Mar 25 08:06:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044596.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/044596hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2vqca1 a.4.5.78 (A:4-73) F-11 32.5 15 0.0011 28.2 3.0 34 467-502 22-56 (70)
2 d1rqpa2 c.132.1.1 (A:8-192) 5' 15.0 43 0.0031 30.3 3.0 40 595-642 32-71 (185)
3 d1miwa1 a.173.1.1 (A:140-404) 13.7 44 0.0032 29.3 2.7 45 469-520 213-257 (265)
4 d2jdqd1 d.361.1.1 (D:688-756) 8.5 1.2E+02 0.0085 23.1 3.0 25 615-640 25-49 (69)
5 d1piwa1 b.35.1.2 (A:1-152,A:32 7.9 58 0.0042 28.6 1.2 14 595-608 41-54 (192)
6 d1e3ja1 b.35.1.2 (A:4-142,A:31 6.5 1.1E+02 0.0077 25.9 2.2 31 575-606 11-44 (178)
7 d1sbza_ c.34.1.1 (A:) Probable 5.6 1.4E+02 0.011 25.8 2.6 23 497-520 146-168 (186)
8 d1kg1a_ g.70.1.1 (A:) Necrosis 5.1 96 0.007 22.7 0.8 10 280-289 41-50 (60)
9 d1ri9a_ b.34.2.1 (A:) Fyn-bind 4.9 1.3E+02 0.0098 23.5 1.6 35 593-632 20-55 (77)
10 d1f60a2 b.44.1.1 (A:335-441) E 4.6 4.5E+02 0.033 20.9 4.9 21 608-635 54-74 (107)
No 1
>d2vqca1 a.4.5.78 (A:4-73) F-112 {Sulfolobus virus-like particle SSV1 [TaxId: 244589]}
Probab=32.52 E-value=15 Score=28.18 Aligned_cols=34 Identities=29% Similarity=0.431 Sum_probs=26.5
Q ss_pred cHHHHHHHhcCCCCchHHHHHHHHHHH-hccCCCCCC
Q 044596 467 NVNVLKEIFHASENSSMESIIKDALSE-CERQPSKGE 502 (644)
Q Consensus 467 kL~eIL~~Fsi~~~S~~A~~m~~TL~~-CE~~pi~GE 502 (644)
.|.+||..|-|+. +.|-.|+.||+. ||+-|.+-|
T Consensus 22 ~ledilaqfeis~--~~ayniqr~l~~ice~hpdece 56 (70)
T d2vqca1 22 TLEDILAQFEISV--PSAYNIQRALKAICERHPDECE 56 (70)
T ss_dssp CHHHHHHHHCCCH--HHHHHHHHHHHHHHHHCTTTEE
T ss_pred cHHHHHHHheecc--chHhHHHHHHHHHHhcCCchhh
Confidence 4889999999864 567788888875 999876544
No 2
>d1rqpa2 c.132.1.1 (A:8-192) 5'-fluoro-5'-deoxyadenosine synthase {Streptomyces cattleya [TaxId: 29303]}
Probab=14.97 E-value=43 Score=30.32 Aligned_cols=40 Identities=20% Similarity=0.339 Sum_probs=33.4
Q ss_pred eEEEEeeccCCCCCCcchHHHhhCCCCCCcceeeeeeCCceEEeecCC
Q 044596 595 HGVAICHIDTSAWSQTHGAFLALGSGPGRIEVCHWIFENDLTWTIVDR 642 (644)
Q Consensus 595 ~AvAVCH~DTS~WnP~H~AF~~L~vkPG~~pVCHfi~~~~ivWvpa~~ 642 (644)
+-|-||| +.+.||-.|.||.+.. .|+++|++.|.=+-+|+
T Consensus 32 ~IVDItH-~I~pfdi~~aA~~L~~-------~~~~FP~gTVhl~vVDp 71 (185)
T d1rqpa2 32 TVVDVCH-SMTPWDVEEGARYIVD-------LPRFFPEGTVFATTTYP 71 (185)
T ss_dssp EEEEEES-CSCTTCHHHHHHTTTT-------CGGGSCTTCEEEEECCT
T ss_pred CEEEccC-CCCCCCHHHHHHHHHH-------HHhhCCCccEEEEEecC
Confidence 4599999 8999999999998874 78888998887777665
No 3
>d1miwa1 a.173.1.1 (A:140-404) tRNA CCA-adding enzyme, C-terminal domains {Bacillus stearothermophilus [TaxId: 1422]}
Probab=13.71 E-value=44 Score=29.31 Aligned_cols=45 Identities=11% Similarity=0.082 Sum_probs=32.3
Q ss_pred HHHHHHhcCCCCchHHHHHHHHHHHhccCCCCCCcccccCchhhHHHHHhhh
Q 044596 469 NVLKEIFHASENSSMESIIKDALSECERQPSKGETKRCIGSAEDMIDFATSV 520 (644)
Q Consensus 469 ~eIL~~Fsi~~~S~~A~~m~~TL~~CE~~pi~GE~K~CaTSLESMiDFa~S~ 520 (644)
.+|+++++++||..+.+++ ++++..-+.|+ +.++.|++++|+...
T Consensus 213 ~dL~~~~g~~pGp~iG~il----~~l~~~~l~~~---~~n~ke~l~~~l~~~ 257 (265)
T d1miwa1 213 KDVIEWVGKPAGPWVKEAL----DAIWRAVVNGE---VENEKERIYAWLMER 257 (265)
T ss_dssp HHHHHHHTCCSSHHHHHHH----HHHHHHHHTTS---SCSCHHHHHHHHHHH
T ss_pred HHHHHHcCCCCCHHHHHHH----HHHHHHHHcCC---CCCCHHHHHHHHHHh
Confidence 4688889999988766655 44444445555 567899999998754
No 4
>d2jdqd1 d.361.1.1 (D:688-756) Polymerase basic protein 2, BP2 {Influenza A virus [TaxId: 11320]}
Probab=8.49 E-value=1.2e+02 Score=23.10 Aligned_cols=25 Identities=12% Similarity=0.048 Sum_probs=20.6
Q ss_pred HhhCCCCCCcceeeeeeCCceEEeec
Q 044596 615 LALGSGPGRIEVCHWIFENDLTWTIV 640 (644)
Q Consensus 615 ~~L~vkPG~~pVCHfi~~~~ivWvpa 640 (644)
++-+++||+ -.--||.++++|||..
T Consensus 25 eLs~L~kGE-kANvligqg~~v~v~k 49 (69)
T d2jdqd1 25 ELSNLAKGE-KANVLIGQGDVVLVMK 49 (69)
T ss_dssp GGGGSCTTC-EEEEEEETTEEEEEEE
T ss_pred HHhhcCccc-cccEEEeCCCEEEEEE
Confidence 456788998 5677999999999974
No 5
>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=7.93 E-value=58 Score=28.59 Aligned_cols=14 Identities=14% Similarity=0.351 Sum_probs=11.0
Q ss_pred eEEEEeeccCCCCC
Q 044596 595 HGVAICHIDTSAWS 608 (644)
Q Consensus 595 ~AvAVCH~DTS~Wn 608 (644)
++++|||.|...|.
T Consensus 41 ~a~giC~sDl~~~~ 54 (192)
T d1piwa1 41 EACGVCGSDIHCAA 54 (192)
T ss_dssp EEEEECHHHHHHHT
T ss_pred eeeCCCcchHHHHc
Confidence 69999999965444
No 6
>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}
Probab=6.53 E-value=1.1e+02 Score=25.85 Aligned_cols=31 Identities=23% Similarity=0.356 Sum_probs=17.5
Q ss_pred CceeEEEEEeeCCcCcc---ccceEEEEeeccCCC
Q 044596 575 PKVRVYEADLLDPKTKA---KINHGVAICHIDTSA 606 (644)
Q Consensus 575 ~~TrvY~V~L~g~d~~~---ki~~AvAVCH~DTS~ 606 (644)
.+.++=++++-....++ | +++.+|||.|...
T Consensus 11 ~~l~~~e~~~P~~~~~evlVk-v~a~gic~sD~~~ 44 (178)
T d1e3ja1 11 NDLRLEQRPIPEPKEDEVLLQ-MAYVGICGSDVHY 44 (178)
T ss_dssp TEEEEEECCCCCCCTTEEEEE-EEEEEECHHHHHH
T ss_pred CcEEEEEeECCCCCCCEEEEE-EEEEcccCchhhh
Confidence 34455555553322222 3 3699999999743
No 7
>d1sbza_ c.34.1.1 (A:) Probable aromatic acid decarboxylase Pad1 {Escherichia coli O157:H7 [TaxId: 83334]}
Probab=5.56 E-value=1.4e+02 Score=25.81 Aligned_cols=23 Identities=9% Similarity=0.141 Sum_probs=18.3
Q ss_pred CCCCCCcccccCchhhHHHHHhhh
Q 044596 497 QPSKGETKRCIGSAEDMIDFATSV 520 (644)
Q Consensus 497 ~pi~GE~K~CaTSLESMiDFa~S~ 520 (644)
||+.|- ..+..++|+|+||++.+
T Consensus 146 pp~~g~-y~~p~~~~dl~~~~v~r 168 (186)
T d1sbza_ 146 PPMPAF-YNHPETVDDIVHHVVAR 168 (186)
T ss_dssp CCCCCC-TTCCCBHHHHHHHHHHH
T ss_pred CCChhh-hcCCCCHHHHHHHHHHH
Confidence 566664 66899999999998755
No 8
>d1kg1a_ g.70.1.1 (A:) Necrosis inducing protein 1, NIP1 {Leaf blotch of barley (Rhynchosporium secalis) [TaxId: 38038]}
Probab=5.07 E-value=96 Score=22.66 Aligned_cols=10 Identities=60% Similarity=1.102 Sum_probs=6.9
Q ss_pred cccccccCCC
Q 044596 280 FTSYGEAGNA 289 (644)
Q Consensus 280 F~~YG~~gN~ 289 (644)
.-+||++|||
T Consensus 41 lcsygeggng 50 (60)
T d1kg1a_ 41 LCSYGEGGNG 50 (60)
T ss_dssp ECCBCTTSSC
T ss_pred EEeecCCCCc
Confidence 4567777776
No 9
>d1ri9a_ b.34.2.1 (A:) Fyn-binding protein (T-cell adapter protein adap) {Human (Homo sapiens) [TaxId: 9606]}
Probab=4.88 E-value=1.3e+02 Score=23.51 Aligned_cols=35 Identities=20% Similarity=0.351 Sum_probs=24.4
Q ss_pred cceEEEEeeccCCCCCCcchHHHhhCCCCCC-cceeeeeeC
Q 044596 593 INHGVAICHIDTSAWSQTHGAFLALGSGPGR-IEVCHWIFE 632 (644)
Q Consensus 593 i~~AvAVCH~DTS~WnP~H~AF~~L~vkPG~-~pVCHfi~~ 632 (644)
+.+|.|.|-+-.+.|...+ |.++||+ ++|=-+-++
T Consensus 20 l~~~~v~~~~~~~k~g~~d-----L~vk~GE~ldVIr~t~~ 55 (77)
T d1ri9a_ 20 LYSTKVTTSITSKKWGTRD-----LQVKPGESLEVIQTTDD 55 (77)
T ss_dssp SSCCBCCTTSCSSCCCTTB-----CCCCTTCBCEEEEESSS
T ss_pred EEEEEEeeccccccCCccc-----CCcCCCCEEEEEEeCCC
Confidence 3456677766777898865 8899999 466655443
No 10
>d1f60a2 b.44.1.1 (A:335-441) Elongation factor eEF-1alpha, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=4.60 E-value=4.5e+02 Score=20.90 Aligned_cols=21 Identities=5% Similarity=0.172 Sum_probs=16.9
Q ss_pred CCcchHHHhhCCCCCCcceeeeeeCCce
Q 044596 608 SQTHGAFLALGSGPGRIEVCHWIFENDL 635 (644)
Q Consensus 608 nP~H~AF~~L~vkPG~~pVCHfi~~~~i 635 (644)
+|++ ++.|+..+|.|.++.-|
T Consensus 54 ~P~~-------l~~g~~a~v~i~~~~pi 74 (107)
T d1f60a2 54 HPKF-------LKSGDAALVKFVPSKPM 74 (107)
T ss_dssp SCSC-------BCTTCEEEEEEEESSCC
T ss_pred CCcc-------cCCCCEEEEEEEeCCCC
Confidence 6766 68999999999988654
Done!