Your job contains 1 sequence.
>044599
MSLASLQPIEEKPAVNQDPKTPTTTTSTPTRTVSQPQPKPQPRTQSSYLPKKRAEPTIPT
IILNACDDIINNFIDPPLKYSVDPRHVLSDNFAPVDELPPTECEVVQGSLPSCLDGAYIR
NGPNPQYLPRGPYHLFDGDGMLHSIKISRGRATLCSRYVRTYKYTIENEAGSPILPNVFS
GFNGLTASAARGALSAARLLADLPYAIRLTPNGDIETIGRHDFDGKLAMSMTAHPKLDSD
TGEAFAFRYGPVPPFLTYFRFDANGKKQPNVPIFSMTRPSFLHDFAITKKYAVFVDIQIG
MNPMEMIFGGGSPVGADPAKVCRIGIIPRYATDESQMRWFEVPGFNIIHAINAWDEEDGN
AVVMVAPNILSVEHTLDRTDLVHALVEKVRIDLRTGIVTRRPMSARNLDFGVINPAYMAK
KSRYVYAAVGDPMPKISGVVKLDVSKGDERRDCIVATRIFGPGCYGGEPFFVARDPENPE
TEEDDGYVVSYVHDENTGESKFLVMDAKSPRLDIVAAVKLPRRVPYGFHGLFVRQADLDK
LL
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 044599
(542 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2134796 - symbol:NCED4 "nine-cis-epoxycaroteno... 1436 3.5e-202 2
TAIR|locus:2202492 - symbol:NCED5 "nine-cis-epoxycaroteno... 699 2.6e-94 2
TAIR|locus:2091652 - symbol:NCED3 "nine-cis-epoxycaroteno... 693 1.9e-89 2
TAIR|locus:2124489 - symbol:NCED2 "nine-cis-epoxycaroteno... 646 7.2e-88 2
TAIR|locus:2032085 - symbol:NCED9 "nine-cis-epoxycaroteno... 676 1.9e-87 2
TAIR|locus:2087418 - symbol:CCD1 "carotenoid cleavage dio... 657 1.3e-86 2
TAIR|locus:2093751 - symbol:NCED6 "nine-cis-epoxycaroteno... 603 7.4e-80 2
UNIPROTKB|O06785 - symbol:MT0683 "Carotenoid cleavage oxy... 226 2.0e-32 2
UNIPROTKB|Q53353 - symbol:Q53353 "Lignostilbene-alpha,bet... 244 6.1e-26 2
ASPGD|ASPL0000067272 - symbol:AN7062 species:162425 "Emer... 218 9.6e-21 2
UNIPROTKB|Q52008 - symbol:lsdB "Lignostilbene-alpha,beta-... 215 4.0e-20 2
TAIR|locus:2134093 - symbol:CCD8 "carotenoid cleavage dio... 154 8.3e-20 3
ZFIN|ZDB-GENE-060421-7448 - symbol:bco2b "beta-carotene o... 123 4.9e-19 3
UNIPROTKB|Q2KEQ1 - symbol:MGCH7_ch7g985 "Putative unchara... 221 7.7e-19 2
ASPGD|ASPL0000046682 - symbol:AN1643 species:162425 "Emer... 210 1.5e-18 2
UNIPROTKB|Q83CU2 - symbol:CBU_1011 "Lignostilbene-alpha,b... 238 1.7e-17 1
TIGR_CMR|CBU_1011 - symbol:CBU_1011 "dioxygenase, putativ... 238 1.7e-17 1
MGI|MGI:2177469 - symbol:Bco2 "beta-carotene oxygenase 2"... 125 4.4e-17 3
MGI|MGI:98001 - symbol:Rpe65 "retinal pigment epithelium ... 113 3.0e-16 3
ZFIN|ZDB-GENE-040426-1191 - symbol:bcmo1b "beta-carotene ... 121 3.7e-16 3
RGD|621396 - symbol:Rpe65 "retinal pigment epithelium 65"... 114 5.9e-16 3
UNIPROTKB|E1C8E0 - symbol:BCO2 "Uncharacterized protein" ... 119 5.9e-16 3
UNIPROTKB|E2RS36 - symbol:BCO2 "Uncharacterized protein" ... 121 1.8e-15 3
UNIPROTKB|Q8HXG8 - symbol:BCO2 "Beta,beta-carotene 9',10'... 124 1.8e-15 3
UNIPROTKB|F1PXT9 - symbol:RPE65 "Retinoid isomerohydrolas... 113 2.5e-15 3
UNIPROTKB|Q9TVB8 - symbol:RPE65 "Retinoid isomerohydrolas... 113 2.5e-15 3
UNIPROTKB|F1S830 - symbol:RPE65 "Uncharacterized protein"... 113 3.9e-15 3
ZFIN|ZDB-GENE-010509-1 - symbol:bco2l "beta-carotene 15, ... 128 4.1e-15 3
UNIPROTKB|Q16518 - symbol:RPE65 "Retinoid isomerohydrolas... 113 5.0e-15 3
UNIPROTKB|Q9YGX2 - symbol:RPE65 "Retinoid isomerohydrolas... 117 7.4e-15 3
UNIPROTKB|Q9BYV7 - symbol:BCO2 "Beta,beta-carotene 9',10'... 125 8.7e-15 3
UNIPROTKB|F1SM94 - symbol:BCO2 "Uncharacterized protein" ... 117 1.0e-14 3
UNIPROTKB|Q28175 - symbol:RPE65 "Retinoid isomerohydrolas... 113 1.0e-14 3
ZFIN|ZDB-GENE-010508-1 - symbol:bcmo1a "beta-carotene 15,... 124 3.6e-14 3
UNIPROTKB|Q9I993 - symbol:BCMO1 "Beta,beta-carotene 15,15... 119 2.2e-13 3
MGI|MGI:1926923 - symbol:Bcmo1 "beta-carotene 15,15'-mono... 119 2.4e-13 3
UNIPROTKB|Q746V1 - symbol:GSU3417 "Dioxygenase, putative"... 150 4.1e-13 2
TIGR_CMR|GSU_3417 - symbol:GSU_3417 "dioxygenase, putativ... 150 4.1e-13 2
UNIPROTKB|Q9HAY6 - symbol:BCMO1 "Beta,beta-carotene 15,15... 116 1.8e-12 3
ZFIN|ZDB-GENE-081104-505 - symbol:rpe65c "retinal pigment... 117 2.0e-12 3
RGD|70981 - symbol:Bcmo1 "beta-carotene 15,15'-monooxygen... 113 3.5e-12 3
UNIPROTKB|Q91XT5 - symbol:Bcmo1 "Beta,beta-carotene 15,15... 113 3.5e-12 3
ZFIN|ZDB-GENE-050410-16 - symbol:rpe65b "retinal pigment ... 109 6.1e-12 3
WB|WBGene00012914 - symbol:bcmo-1 species:6239 "Caenorhab... 118 6.2e-12 3
ASPGD|ASPL0000049803 - symbol:AN1704 species:162425 "Emer... 138 2.9e-11 3
UNIPROTKB|E9PJJ1 - symbol:BCO2 "Beta,beta-carotene 9',10'... 125 1.8e-09 3
UNIPROTKB|F1N2Z9 - symbol:BCO2 "Uncharacterized protein" ... 111 6.1e-09 3
UNIPROTKB|F1N3B7 - symbol:BCMO1 "Uncharacterized protein"... 117 6.4e-09 3
UNIPROTKB|G4MX63 - symbol:MGG_08016 "Retinal pigment epit... 145 7.2e-09 3
WB|WBGene00018755 - symbol:bcmo-2 species:6239 "Caenorhab... 108 1.6e-08 3
UNIPROTKB|F1P321 - symbol:RPE65 "Retinoid isomerohydrolas... 101 3.8e-07 2
UNIPROTKB|F1NE28 - symbol:RPE65 "Retinoid isomerohydrolas... 101 4.0e-07 2
UNIPROTKB|Q7XU29 - symbol:OSJNBb0034G17.9 "OSJNBb0034G17.... 132 1.1e-06 2
FB|FBgn0002937 - symbol:ninaB "neither inactivation nor a... 89 1.7e-06 3
ZFIN|ZDB-GENE-040426-1717 - symbol:rpe65a "retinal pigmen... 110 2.7e-06 2
RGD|1309022 - symbol:Bco2 "beta-carotene oxygenase 2" spe... 109 0.00019 2
RGD|1597300 - symbol:Tex12 "testis expressed 12" species:... 109 0.00019 2
>TAIR|locus:2134796 [details] [associations]
symbol:NCED4 "nine-cis-epoxycarotenoid dioxygenase 4"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010287 "plastoglobule" evidence=IDA] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=RCA] EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
EMBL:AL021687 EMBL:AL161550 GO:GO:0016702 GO:GO:0010287
eggNOG:COG3670 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
HOGENOM:HOG000254836 EMBL:AY136353 EMBL:BT008785 EMBL:AY056789
EMBL:AK227175 IPI:IPI00536835 PIR:T04438 RefSeq:NP_193652.1
UniGene:At.1927 UniGene:At.67316 ProteinModelPortal:O49675
SMR:O49675 IntAct:O49675 STRING:O49675 PaxDb:O49675 PRIDE:O49675
EnsemblPlants:AT4G19170.1 GeneID:827655 KEGG:ath:AT4G19170
TAIR:At4g19170 InParanoid:O49675 KO:K09840 OMA:HGAWVPR
PhylomeDB:O49675 ProtClustDB:CLSN2685496 Genevestigator:O49675
Uniprot:O49675
Length = 595
Score = 1436 (510.6 bits), Expect = 3.5e-202, Sum P(2) = 3.5e-202
Identities = 265/342 (77%), Positives = 306/342 (89%)
Query: 202 DLPYAIRLTPNGDIETIGRHDFDGKLAMSMTAHPKLDSDTGEAFAFRYGPVPPFLTYFRF 261
DLPYA+RLT +GDIETIGR+DFDGKLAMSMTAHPK D TGE FAFRYGPVPPFLTYFRF
Sbjct: 255 DLPYAVRLTESGDIETIGRYDFDGKLAMSMTAHPKTDPITGETFAFRYGPVPPFLTYFRF 314
Query: 262 DANGKKQPNVPIFSMTRPSFLHDFAITKKYAVFVDIQIGM--NPMEMIFGGGSPVGADPA 319
D+ GKKQ +VPIFSMT PSFLHDFAITK++A+F +IQ+GM N ++++ GGSPVG D
Sbjct: 315 DSAGKKQRDVPIFSMTSPSFLHDFAITKRHAIFAEIQLGMRMNMLDLVLEGGSPVGTDNG 374
Query: 320 KVCRIGIIPRYATDESQMRWFEVPGFNIIHAINAWDEEDGNAVVMVAPNILSVEHTLDRT 379
K R+G+IP+YA DES+M+WFEVPGFNIIHAINAWDE+DGN+VV++APNI+S+EHTL+R
Sbjct: 375 KTPRLGVIPKYAGDESEMKWFEVPGFNIIHAINAWDEDDGNSVVLIAPNIMSIEHTLERM 434
Query: 380 DLVHALVEKVRIDLRTGIVTRRPMSARNLDFGVINPAYMAKKSRYVYAAVGDPMPKISGV 439
DLVHALVEKV+IDL TGIV R P+SARNLDF VINPA++ + SRYVYAA+GDPMPKISGV
Sbjct: 435 DLVHALVEKVKIDLVTGIVRRHPISARNLDFAVINPAFLGRCSRYVYAAIGDPMPKISGV 494
Query: 440 VKLDVSKGDERRDCIVATRIFGPGCYGGEPFFVARDPENPETEEDDGYVVSYVHDENTGE 499
VKLDVSKGD R DC VA R++G GCYGGEPFFVARDP NPE EEDDGYVV+YVHDE TGE
Sbjct: 495 VKLDVSKGD-RDDCTVARRMYGSGCYGGEPFFVARDPGNPEAEEDDGYVVTYVHDEVTGE 553
Query: 500 SKFLVMDAKSPRLDIVAAVKLPRRVPYGFHGLFVRQADLDKL 541
SKFLVMDAKSP L+IVAAV+LPRRVPYGFHGLFV+++DL+KL
Sbjct: 554 SKFLVMDAKSPELEIVAAVRLPRRVPYGFHGLFVKESDLNKL 595
Score = 543 (196.2 bits), Expect = 3.5e-202, Sum P(2) = 3.5e-202
Identities = 94/135 (69%), Positives = 114/135 (84%)
Query: 50 PKKRAEPTIPTIILNACDDIINNFIDPPLKYSVDPRHVLSDNFAPV-DELPPTECEVVQG 108
PK R E T+ T + +D+IN FIDPP + SVDP+HVLSDNFAPV DELPPT+CE++ G
Sbjct: 73 PKLRPEMTLATALFTTVEDVINTFIDPPSRPSVDPKHVLSDNFAPVLDELPPTDCEIIHG 132
Query: 109 SLPSCLDGAYIRNGPNPQYLPRGPYHLFDGDGMLHSIKISRGRATLCSRYVRTYKYTIEN 168
+LP L+GAYIRNGPNPQ+LPRGPYHLFDGDGMLH+IKI G+ATLCSRYV+TYKY +E
Sbjct: 133 TLPLSLNGAYIRNGPNPQFLPRGPYHLFDGDGMLHAIKIHNGKATLCSRYVKTYKYNVEK 192
Query: 169 EAGSPILPNVFSGFN 183
+ G+P++PNVFSGFN
Sbjct: 193 QTGAPVMPNVFSGFN 207
>TAIR|locus:2202492 [details] [associations]
symbol:NCED5 "nine-cis-epoxycarotenoid dioxygenase 5"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM] [GO:0009579 "thylakoid" evidence=IDA] [GO:0009688
"abscisic acid biosynthetic process" evidence=IMP;TAS] [GO:0045549
"9-cis-epoxycarotenoid dioxygenase activity" evidence=TAS]
[GO:0009414 "response to water deprivation" evidence=IGI]
[GO:0010162 "seed dormancy process" evidence=IGI] EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0009414 GO:GO:0009688
GO:GO:0009579 GO:GO:0009535 eggNOG:COG3670 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 GO:GO:0010162 HOGENOM:HOG000254836
GO:GO:0045549 KO:K09840 EMBL:AC074176 ProtClustDB:PLN02258
EMBL:AK226774 IPI:IPI00530821 PIR:A86425 RefSeq:NP_174302.1
UniGene:At.51834 ProteinModelPortal:Q9C6Z1 SMR:Q9C6Z1 IntAct:Q9C6Z1
STRING:Q9C6Z1 EnsemblPlants:AT1G30100.1 GeneID:839889
KEGG:ath:AT1G30100 TAIR:At1g30100 InParanoid:Q9C6Z1 OMA:PTYVLHF
PhylomeDB:Q9C6Z1 Genevestigator:Q9C6Z1 Uniprot:Q9C6Z1
Length = 589
Score = 699 (251.1 bits), Expect = 2.6e-94, Sum P(2) = 2.6e-94
Identities = 147/343 (42%), Positives = 214/343 (62%)
Query: 202 DLPYAIRLTPNGDIETIGRHDFDGKLAMSMTAHPKLDSDTGEAFAFRYGPVP-PFLTYFR 260
DLPY +R+T NGD+ETIGR DFDG+L+ +M AHPK+D T E FA Y V P+L YF+
Sbjct: 255 DLPYQVRVTDNGDLETIGRFDFDGQLSSAMIAHPKIDPVTKELFALSYDVVKKPYLKYFK 314
Query: 261 FDANGKKQPNVPIFSMTRPSFLHDFAITKKYAVFVDIQIGMNPMEMIFGGGSPVGADPAK 320
F G+K P+V I + P+ +HDFAIT+ + V D Q+ +M F G SPV D K
Sbjct: 315 FSPEGEKSPDVEI-PLASPTMMHDFAITENFVVIPDQQVVFKLSDM-FLGKSPVKYDGEK 372
Query: 321 VCRIGIIPRYATDESQMRWFEVPGFNIIHAINAWDEEDGNAVVMVAPNILSVEHTLDRTD 380
+ R GI+PR A D S+M W E P H NAW+ + + VV++ + + + D
Sbjct: 373 ISRFGILPRNAKDASEMVWVESPETFCFHLWNAWESPETDEVVVIGSCMTPADSIFNECD 432
Query: 381 -LVHALVEKVRIDLRTGIVTRR---PMSAR-NLDFGVINPAYMAKKSRYVYAAVGDPMPK 435
+++++ ++R++L+TG TRR P S + NL+ G++N + +K+RY Y A+ +P PK
Sbjct: 433 EQLNSVLSEIRLNLKTGKSTRRTIIPGSVQMNLEAGMVNRNLLGRKTRYAYLAIAEPWPK 492
Query: 436 ISGVVKLDVSKGDERRDCIVATRIFGPGCYGGEPFFVARDPENPETEEDDGYVVSYVHDE 495
+SG K+D+S G+ V +G YGGEPFF+ R E+ EDDGY++S+VHDE
Sbjct: 493 VSGFAKVDLSTGE------VKNHFYGGKKYGGEPFFLPRGLESDG--EDDGYIMSFVHDE 544
Query: 496 NTGESKFLVMDAKSPRLDIVAAVKLPRRVPYGFHGLFVRQADL 538
+ ES+ +++A + L++ A VKLP RVPYGFHG FV AD+
Sbjct: 545 ESWESELHIVNAVT--LELEATVKLPSRVPYGFHGTFVNSADM 585
Score = 259 (96.2 bits), Expect = 2.6e-94, Sum P(2) = 2.6e-94
Identities = 47/100 (47%), Positives = 63/100 (63%)
Query: 77 PLKYSVDPRHVLSDNFAPVDELPPTECEVVQGSLPSCLDGAYIRNGPNPQYLPRGPYHLF 136
PL +VDPRH +S N+APV E V G +P C+DG Y+RNG NP + P +HLF
Sbjct: 102 PLPKTVDPRHQISGNYAPVPEQSVKSSLSVDGKIPDCIDGVYLRNGANPLFEPVSGHHLF 161
Query: 137 DGDGMLHSIKISRGRATLCSRYVRTYKYTIENEAGSPILP 176
DGDGM+H++KI+ G A+ R+ T + E + GSPI P
Sbjct: 162 DGDGMVHAVKITNGDASYSCRFTETERLVQEKQLGSPIFP 201
>TAIR|locus:2091652 [details] [associations]
symbol:NCED3 "nine-cis-epoxycarotenoid dioxygenase 3"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM] [GO:0009414 "response to water deprivation"
evidence=RCA;IMP] [GO:0045549 "9-cis-epoxycarotenoid dioxygenase
activity" evidence=ISS;IDA] [GO:0009535 "chloroplast thylakoid
membrane" evidence=IDA] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0009688 "abscisic acid biosynthetic process"
evidence=ISS] [GO:0042538 "hyperosmotic salinity response"
evidence=RCA;IMP] [GO:0006970 "response to osmotic stress"
evidence=IMP] [GO:0009409 "response to cold" evidence=RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=RCA]
GO:GO:0009570 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0009414 GO:GO:0009688 GO:GO:0009535 GO:GO:0042538
eggNOG:COG3670 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
HOGENOM:HOG000254836 GO:GO:0045549 KO:K09840 OMA:HTLNAYD
EMBL:AB028617 ProtClustDB:PLN02258 EMBL:AB026549 EMBL:AY056255
IPI:IPI00528622 RefSeq:NP_188062.1 UniGene:At.26346
ProteinModelPortal:Q9LRR7 SMR:Q9LRR7 STRING:Q9LRR7 PaxDb:Q9LRR7
EnsemblPlants:AT3G14440.1 GeneID:820667 KEGG:ath:AT3G14440
TAIR:At3g14440 InParanoid:Q9LRR7 PhylomeDB:Q9LRR7
BioCyc:ARA:AT3G14440-MONOMER BioCyc:MetaCyc:AT3G14440-MONOMER
Genevestigator:Q9LRR7 Uniprot:Q9LRR7
Length = 599
Score = 693 (249.0 bits), Expect = 1.9e-89, Sum P(2) = 1.9e-89
Identities = 139/346 (40%), Positives = 218/346 (63%)
Query: 202 DLPYAIRLTPNGDIETIGRHDFDGKLAMSMTAHPKLDSDTGEAFAFRYGPVP-PFLTYFR 260
DLPY +++TPNGD++T+GR DFDG+L +M AHPK+D ++GE FA Y V P+L YFR
Sbjct: 265 DLPYQVQITPNGDLKTVGRFDFDGQLESTMIAHPKVDPESGELFALSYDVVSKPYLKYFR 324
Query: 261 FDANGKKQPNVPIFSMTRPSFLHDFAITKKYAVFVDIQIGMNPMEMIFGGGSPVGADPAK 320
F +G K P+V I + +P+ +HDFAIT+ + V D Q+ EMI GGSPV D K
Sbjct: 325 FSPDGTKSPDVEI-QLDQPTMMHDFAITENFVVVPDQQVVFKLPEMI-RGGSPVVYDKNK 382
Query: 321 VCRIGIIPRYATDESQMRWFEVPGFNIIHAINAWDEEDGNAVVMVAPNILSVEHTLDRTD 380
V R GI+ +YA D S ++W + P H NAW+E + + VV++ + + + +D
Sbjct: 383 VARFGILDKYAEDSSNIKWIDAPDCFCFHLWNAWEEPETDEVVVIGSCMTPPDSIFNESD 442
Query: 381 L-VHALVEKVRIDLRTGIVTRRPMSAR-----NLDFGVINPAYMAKKSRYVYAAVGDPMP 434
+ +++ ++R++L+TG TRRP+ + NL+ G++N + +K+++ Y A+ +P P
Sbjct: 443 ENLKSVLSEIRLNLKTGESTRRPIISNEDQQVNLEAGMVNRNMLGRKTKFAYLALAEPWP 502
Query: 435 KISGVVKLDVSKGDERRDCIVATRIFGPGCYGGEPFFVARDPENPETEEDDGYVVSYVHD 494
K+SG K+D++ G+ ++ ++G YGGEP F+ + EED+GY++ +VHD
Sbjct: 503 KVSGFAKVDLTTGEVKK------HLYGDNRYGGEPLFLPGEGG----EEDEGYILCFVHD 552
Query: 495 ENTGESKFLVMDAKSPRLDIVAAVKLPRRVPYGFHGLFVRQADLDK 540
E T +S+ +++A S L++ A VKLP RVPYGFHG F+ DL K
Sbjct: 553 EKTWKSELQIVNAVS--LEVEATVKLPSRVPYGFHGTFIGADDLAK 596
Score = 219 (82.2 bits), Expect = 1.9e-89, Sum P(2) = 1.9e-89
Identities = 40/100 (40%), Positives = 58/100 (58%)
Query: 77 PLKYSVDPRHVLSDNFAPVDELPPTECEVVQGSLPSCLDGAYIRNGPNPQYLPRGPYHLF 136
PL + DP ++ NFAPV+E P V G LP + G Y+RNG NP + P +H F
Sbjct: 112 PLPKTADPSVQIAGNFAPVNEQPVRRNLPVVGKLPDSIKGVYVRNGANPLHEPVTGHHFF 171
Query: 137 DGDGMLHSIKISRGRATLCSRYVRTYKYTIENEAGSPILP 176
DGDGM+H++K G A+ R+ +T ++ E + G P+ P
Sbjct: 172 DGDGMVHAVKFEHGSASYACRFTQTNRFVQERQLGRPVFP 211
>TAIR|locus:2124489 [details] [associations]
symbol:NCED2 "nine-cis-epoxycarotenoid dioxygenase 2"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM] [GO:0045549 "9-cis-epoxycarotenoid dioxygenase
activity" evidence=ISS;IDA] [GO:0009535 "chloroplast thylakoid
membrane" evidence=IDA] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0009688 "abscisic acid biosynthetic process"
evidence=ISS] GO:GO:0009570 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0046872 GO:GO:0009688 GO:GO:0009535 EMBL:AL161548
eggNOG:COG3670 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
HOGENOM:HOG000254836 GO:GO:0045549 KO:K09840 EMBL:AL021710
EMBL:BT030365 IPI:IPI00523545 PIR:T04531 RefSeq:NP_193569.1
UniGene:At.32916 ProteinModelPortal:O49505 SMR:O49505 STRING:O49505
EnsemblPlants:AT4G18350.1 GeneID:827562 KEGG:ath:AT4G18350
TAIR:At4g18350 InParanoid:O49505 OMA:MNAWEDG PhylomeDB:O49505
ProtClustDB:PLN02258 BioCyc:MetaCyc:AT4G18350-MONOMER
Genevestigator:O49505 Uniprot:O49505
Length = 583
Score = 646 (232.5 bits), Expect = 7.2e-88, Sum P(2) = 7.2e-88
Identities = 137/346 (39%), Positives = 207/346 (59%)
Query: 202 DLPYAIRLTPNGDIETIGRHDFDGKLAMSMTAHPKLDSDTGEAFAFRYGPVP-PFLTYFR 260
DLPY +++T GD++T+GR+DFDG+L +M AHPKLD T E A Y V P+L YFR
Sbjct: 248 DLPYQLKITQTGDLQTVGRYDFDGQLKSAMIAHPKLDPVTKELHALSYDVVKKPYLKYFR 307
Query: 261 FDANGKKQPNVPIFSMTRPSFLHDFAITKKYAVFVDIQIGMNPMEMIFGGGSPVGADPAK 320
F +G K P + I + P+ +HDFAIT+ + V D Q+ EMI G SPV D K
Sbjct: 308 FSPDGVKSPELEI-PLETPTMIHDFAITENFVVIPDQQVVFKLGEMI-SGKSPVVFDGEK 365
Query: 321 VCRIGIIPRYATDESQMRWFEVPGFNIIHAINAWDEEDGNAVVMVAPNILSVEHTL-DRT 379
V R+GI+P+ AT+ SQ+ W P H NAW+ + +V++ + + +R
Sbjct: 366 VSRLGIMPKDATEASQIIWVNSPETFCFHLWNAWESPETEEIVVIGSCMSPADSIFNERD 425
Query: 380 DLVHALVEKVRIDLRTGIVTRRPMSAR---NLDFGVINPAYMAKKSRYVYAAVGDPMPKI 436
+ + +++ ++RI+LRT TRR + NL+ G++N + +K+R+ + A+ P PK+
Sbjct: 426 ESLRSVLSEIRINLRTRKTTRRSLLVNEDVNLEIGMVNRNRLGRKTRFAFLAIAYPWPKV 485
Query: 437 SGVVKLDVSKGDERRDCIVATRIFGPGCYGGEPFFVARDPENPETEEDDGYVVSYVHDEN 496
SG K+D+ G+ ++ I+G YGGEPFF+ + N E EDDGY+ +VHDE
Sbjct: 486 SGFAKVDLCTGEMKK------YIYGGEKYGGEPFFLPGNSGNGEENEDDGYIFCHVHDEE 539
Query: 497 TGESKFLVMDAKSPRLDIVAAVKLPRRVPYGFHGLFVRQADL-DKL 541
T S+ +++A + +L+ A +KLP RVPYGFHG FV +L D+L
Sbjct: 540 TKTSELQIINAVNLKLE--ATIKLPSRVPYGFHGTFVDSNELVDQL 583
Score = 251 (93.4 bits), Expect = 7.2e-88, Sum P(2) = 7.2e-88
Identities = 46/117 (39%), Positives = 72/117 (61%)
Query: 61 IILNACDD-IINNFIDPPLKYSVDPRHVLSDNFAPVDELPPTECEVVQGSLPSCLDGAYI 119
I ++A + +I++ D PL + DPR ++ N++PV E V+G++P C+DG YI
Sbjct: 78 IAIDAAERALISHEQDSPLPKTADPRVQIAGNYSPVPESSVRRNLTVEGTIPDCIDGVYI 137
Query: 120 RNGPNPQYLPRGPYHLFDGDGMLHSIKISRGRATLCSRYVRTYKYTIENEAGSPILP 176
RNG NP + P +HLFDGDGM+H++KI+ G A+ R+ +T + E G P+ P
Sbjct: 138 RNGANPMFEPTAGHHLFDGDGMVHAVKITNGSASYACRFTKTERLVQEKRLGRPVFP 194
>TAIR|locus:2032085 [details] [associations]
symbol:NCED9 "nine-cis-epoxycarotenoid dioxygenase 9"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM] [GO:0045549 "9-cis-epoxycarotenoid dioxygenase
activity" evidence=IDA;TAS] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0009688 "abscisic acid biosynthetic process"
evidence=RCA;TAS] [GO:0010162 "seed dormancy process"
evidence=IGI;RCA] [GO:0016114 "terpenoid biosynthetic process"
evidence=RCA] EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC013430
GO:GO:0009570 GO:GO:0046872 GO:GO:0009688 eggNOG:COG3670
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055 GO:GO:0010162
HOGENOM:HOG000254836 GO:GO:0045549 KO:K09840 ProtClustDB:PLN02258
IPI:IPI00528094 PIR:E96812 RefSeq:NP_177960.1 UniGene:At.34302
ProteinModelPortal:Q9M9F5 SMR:Q9M9F5 STRING:Q9M9F5 PaxDb:Q9M9F5
PRIDE:Q9M9F5 EnsemblPlants:AT1G78390.1 GeneID:844175
KEGG:ath:AT1G78390 TAIR:At1g78390 InParanoid:Q9M9F5 OMA:WMAVAER
PhylomeDB:Q9M9F5 BioCyc:MetaCyc:AT1G78390-MONOMER
Genevestigator:Q9M9F5 Uniprot:Q9M9F5
Length = 657
Score = 676 (243.0 bits), Expect = 1.9e-87, Sum P(2) = 1.9e-87
Identities = 141/343 (41%), Positives = 215/343 (62%)
Query: 202 DLPYAIRLTPNGDIETIGRHDFDGKLAMSMTAHPKLDSDTGEAFAFRYGPVP-PFLTYFR 260
DLPY +++T GD+ET GR+DFDG+L +M AHPK+D +T E FA Y V P+L YFR
Sbjct: 325 DLPYHVKVTQTGDLETSGRYDFDGQLKSTMIAHPKIDPETRELFALSYDVVSKPYLKYFR 384
Query: 261 FDANGKKQPNVPIFSMTRPSFLHDFAITKKYAVFVDIQIGMNPMEMIFGGGSPVGADPAK 320
F ++G+K P+V I + +P+ +HDFAIT+ + V D Q+ EMI GGSPV D K
Sbjct: 385 FTSDGEKSPDVEI-PLDQPTMIHDFAITENFVVIPDQQVVFRLPEMI-RGGSPVVYDEKK 442
Query: 321 VCRIGIIPRYATDESQMRWFEVPGFNIIHAINAWDEEDGNAVVMVAPNILSVEHTLDRTD 380
R GI+ + A D S ++W EVP H N+W+E + + VV++ + + + D
Sbjct: 443 KSRFGILNKNAKDASSIQWIEVPDCFCFHLWNSWEEPETDEVVVIGSCMTPPDSIFNEHD 502
Query: 381 -LVHALVEKVRIDLRTGIVTRRPMSAR--NLDFGVINPAYMAKKSRYVYAAVGDPMPKIS 437
+ +++ ++R++L+TG TRRP+ + NL+ G++N + +K+RY Y A+ +P PK+S
Sbjct: 503 ETLQSVLSEIRLNLKTGESTRRPVISEQVNLEAGMVNRNLLGRKTRYAYLALTEPWPKVS 562
Query: 438 GVVKLDVSKGDERRDCIVATRIFGPGCYGGEPFFVARDPENPETEEDDGYVVSYVHDENT 497
G K+D+S G+ R+ I+G G YGGEP F+ P + EED GY++ +VHDE
Sbjct: 563 GFAKVDLSTGEIRK------YIYGEGKYGGEPLFL---PSG-DGEEDGGYIMVFVHDEEK 612
Query: 498 GESKFLVMDAKSPRLDIVAAVKLPRRVPYGFHGLFVRQADLDK 540
+S+ +++A + +L+ A V LP RVPYGFHG F+ + DL K
Sbjct: 613 VKSELQLINAVNMKLE--ATVTLPSRVPYGFHGTFISKEDLSK 653
Score = 217 (81.4 bits), Expect = 1.9e-87, Sum P(2) = 1.9e-87
Identities = 45/137 (32%), Positives = 70/137 (51%)
Query: 42 PRTQSSYLPKKRAEPTIPTIILNACDD--IINNFIDPPLKYSVDPRHVLSDNFAPVDELP 99
P+T + PK ++L+A ++ I + P + DP ++ NF PV E P
Sbjct: 136 PKTTNQN-PKLNPVQRTAAMVLDAVENAMISHERRRHPHPKTADPAVQIAGNFFPVPEKP 194
Query: 100 PTECEVVQGSLPSCLDGAYIRNGPNPQYLPRGPYHLFDGDGMLHSIKISRGRATLCSRYV 159
V G++P C+ G Y+RNG NP + P +HLFDGDGM+H+++ G + R+
Sbjct: 195 VVHNLPVTGTVPECIQGVYVRNGANPLHKPVSGHHLFDGDGMVHAVRFDNGSVSYACRFT 254
Query: 160 RTYKYTIENEAGSPILP 176
T + E E G P+ P
Sbjct: 255 ETNRLVQERECGRPVFP 271
>TAIR|locus:2087418 [details] [associations]
symbol:CCD1 "carotenoid cleavage dioxygenase 1"
species:3702 "Arabidopsis thaliana" [GO:0005737 "cytoplasm"
evidence=ISM;IDA] [GO:0009414 "response to water deprivation"
evidence=IEP] [GO:0016118 "carotenoid catabolic process"
evidence=IDA] [GO:0045549 "9-cis-epoxycarotenoid dioxygenase
activity" evidence=IDA] [GO:0005773 "vacuole" evidence=IDA]
[GO:0016121 "carotene catabolic process" evidence=IMP] [GO:0016124
"xanthophyll catabolic process" evidence=IMP] [GO:0005774 "vacuolar
membrane" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794 "Golgi
apparatus" evidence=IDA] [GO:0006098 "pentose-phosphate shunt"
evidence=RCA] [GO:0006636 "unsaturated fatty acid biosynthetic
process" evidence=RCA] [GO:0006655 "phosphatidylglycerol
biosynthetic process" evidence=RCA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA]
[GO:0015995 "chlorophyll biosynthetic process" evidence=RCA]
[GO:0016117 "carotenoid biosynthetic process" evidence=RCA]
[GO:0019288 "isopentenyl diphosphate biosynthetic process,
mevalonate-independent pathway" evidence=RCA] [GO:0044242 "cellular
lipid catabolic process" evidence=RCA] GO:GO:0005886 GO:GO:0009506
GO:GO:0005794 GO:GO:0005774 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006950 GO:GO:0046872 EMBL:AL163818 eggNOG:COG3670
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055 GO:GO:0016121
EMBL:AJ005813 EMBL:BT000436 EMBL:BT002102 IPI:IPI00517969
PIR:T49193 PIR:T51734 RefSeq:NP_191911.1 UniGene:At.22615
UniGene:At.43820 ProteinModelPortal:O65572 SMR:O65572 STRING:O65572
PaxDb:O65572 PRIDE:O65572 EnsemblPlants:AT3G63520.1 GeneID:825527
KEGG:ath:AT3G63520 TAIR:At3g63520 HOGENOM:HOG000254836
InParanoid:O65572 KO:K11159 OMA:GVMMHDF PhylomeDB:O65572
ProtClustDB:PLN02491 Genevestigator:O65572 GO:GO:0045549
GO:GO:0016124 Uniprot:O65572
Length = 538
Score = 657 (236.3 bits), Expect = 1.3e-86, Sum P(2) = 1.3e-86
Identities = 139/350 (39%), Positives = 205/350 (58%)
Query: 202 DLPYAIRLTPNGDIETIGRHDFDGKLAMSMTAHPKLDSDTGEAFAFRYGPVPPFLTYFRF 261
D PY I++ +GD++T+G D+D +L S TAHPK+D TGE F F Y PP+LTY
Sbjct: 190 DKPYVIKVLEDGDLQTLGIIDYDKRLTHSFTAHPKVDPVTGEMFTFGYSHTPPYLTYRVI 249
Query: 262 DANGKKQPNVPIFSMTRPSFLHDFAITKKYAVFVDIQIGMNPMEMIFGGGSPVGADPAKV 321
+G VPI +++ P +HDFAIT+ YA+F+D+ + P EM+ DP K
Sbjct: 250 SKDGIMHDPVPI-TISEPIMMHDFAITETYAIFMDLPMHFRPKEMVKEKKMIYSFDPTKK 308
Query: 322 CRIGIIPRYATDESQMRWFEVPGFNIIHAINAWDEEDGNAVV---MVAPNILSVEHTL-D 377
R G++PRYA DE +RWFE+P I H NAW+EED ++ + P++ V + +
Sbjct: 309 ARFGVLPRYAKDELMIRWFELPNCFIFHNANAWEEEDEVVLITCRLENPDLDMVSGKVKE 368
Query: 378 RTDLVHALVEKVRIDLRTGIVTRRPMSARNLDFGVINPAYMAKKSRYVYAAVGDPMPKIS 437
+ + + ++R +++TG +++ +SA +DF IN Y KK RYVY + D + K++
Sbjct: 369 KLENFGNELYEMRFNMKTGSASQKKLSASAVDFPRINECYTGKKQRYVYGTILDSIAKVT 428
Query: 438 GVVKLDVSKGDE--RRDCIVATRI-----FGPGCYGGEPFFVARDPENPETEEDDGYVVS 490
G++K D+ E +R V I G G YG E +V R+ EEDDGY++
Sbjct: 429 GIIKFDLHAEAETGKRMLEVGGNIKGIYDLGEGRYGSEAIYVPRET----AEEDDGYLIF 484
Query: 491 YVHDENTGESKFLVMDAKSPRLDIVAAVKLPRRVPYGFHGLFVRQADLDK 540
+VHDENTG+S V+DAK+ + VA V+LP RVPYGFH LFV + L +
Sbjct: 485 FVHDENTGKSCVTVIDAKTMSAEPVAVVELPHRVPYGFHALFVTEEQLQE 534
Score = 228 (85.3 bits), Expect = 1.3e-86, Sum P(2) = 1.3e-86
Identities = 44/90 (48%), Positives = 58/90 (64%)
Query: 84 PRHVLSDNFAPV-DELPPTECEVVQGSLPSCLDGAYIRNGPNPQYLPRGPYHLFDGDGML 142
P H LS NFAP+ DE PP + V G LP CL+G ++R GPNP++ YH FDGDGM+
Sbjct: 44 PLHYLSGNFAPIRDETPPVKDLPVHGFLPECLNGEFVRVGPNPKFDAVAGYHWFDGDGMI 103
Query: 143 HSIKISRGRATLCSRYVRTYKYTIENEAGS 172
H ++I G+AT SRYV+T + E G+
Sbjct: 104 HGVRIKDGKATYVSRYVKTSRLKQEEFFGA 133
>TAIR|locus:2093751 [details] [associations]
symbol:NCED6 "nine-cis-epoxycarotenoid dioxygenase 6"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM] [GO:0045549 "9-cis-epoxycarotenoid dioxygenase
activity" evidence=IDA;TAS] [GO:0009535 "chloroplast thylakoid
membrane" evidence=IDA] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0009688 "abscisic acid biosynthetic process"
evidence=RCA;TAS] [GO:0009639 "response to red or far red light"
evidence=IEP] [GO:0010114 "response to red light" evidence=IEP]
[GO:0016114 "terpenoid biosynthetic process" evidence=RCA]
GO:GO:0009570 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0010114 GO:GO:0009688 GO:GO:0009535 eggNOG:COG3670
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
HOGENOM:HOG000254836 GO:GO:0045549 KO:K09840 EMBL:AB028621
ProtClustDB:PLN02258 IPI:IPI00526624 RefSeq:NP_189064.1
UniGene:At.37572 ProteinModelPortal:Q9LRM7 SMR:Q9LRM7 STRING:Q9LRM7
PaxDb:Q9LRM7 EnsemblPlants:AT3G24220.1 GeneID:822008
KEGG:ath:AT3G24220 TAIR:At3g24220 InParanoid:Q9LRM7 OMA:AWEERTE
PhylomeDB:Q9LRM7 BioCyc:MetaCyc:AT3G24220-MONOMER
Genevestigator:Q9LRM7 Uniprot:Q9LRM7
Length = 577
Score = 603 (217.3 bits), Expect = 7.4e-80, Sum P(2) = 7.4e-80
Identities = 135/343 (39%), Positives = 202/343 (58%)
Query: 202 DLPYAIRLTPNGDIETIGRHDFDGKLAMSMTAHPKLDSDTGEAFAFRYGPVP-PFLTYFR 260
DLPY +++ GD+ETIGR FD ++ S+ AHPK+D+ TG+ Y + P L Y +
Sbjct: 244 DLPYQVKIDGQGDLETIGRFGFDDQIDSSVIAHPKVDATTGDLHTLSYNVLKKPHLRYLK 303
Query: 261 FDANGKKQPNVPIFSMTRPSFLHDFAITKKYAVFVDIQIGMNPMEMIFGGGSPVGADPAK 320
F+ GKK +V I ++ P+ +HDFAIT+ + V D Q+ EMI GGSPV K
Sbjct: 304 FNTCGKKTRDVEI-TLPEPTMIHDFAITENFVVIPDQQMVFKLSEMI-RGGSPVIYVKEK 361
Query: 321 VCRIGIIPRYATDESQMRWFEVPGFNIIHAINAWDE--EDGNAVVMVAPNILSVEHTL-- 376
+ R G++ + S + W +VP H NAW+E E+G+ V++V + +S T+
Sbjct: 362 MARFGVLSKQDLTGSDINWVDVPDCFCFHLWNAWEERTEEGDPVIVVIGSCMSPPDTIFS 421
Query: 377 DRTDLVHALVEKVRIDLRTGIVTRRPM-SARNLDFGVINPAYMAKKSRYVYAAVGDPMPK 435
+ + + ++R+++RT R+ + + NL+ G IN +Y+ +KS++VY A+ DP PK
Sbjct: 422 ESGEPTRVELSEIRLNMRTKESNRKVIVTGVNLEAGHINRSYVGRKSQFVYIAIADPWPK 481
Query: 436 ISGVVKLDVSKGDERRDCIVATRIFGPGCYGGEPFFVARDPENPETEEDDGYVVSYVHDE 495
SG+ K+D+ G V+ +GP +GGEP FV PE E EED GYV+ +V DE
Sbjct: 482 CSGIAKVDIQNGT------VSEFNYGPSRFGGEPCFV---PEG-EGEEDKGYVMGFVRDE 531
Query: 496 NTGESKFLVMDAKSPRLDIVAAVKLPRRVPYGFHGLFVRQADL 538
ES+F+V+DA + VAAV+LP RVPYGFHG FV + L
Sbjct: 532 EKDESEFVVVDATDMKQ--VAAVRLPERVPYGFHGTFVSENQL 572
Score = 218 (81.8 bits), Expect = 7.4e-80, Sum P(2) = 7.4e-80
Identities = 44/101 (43%), Positives = 56/101 (55%)
Query: 77 PLKYSVDPRHVLSDNFAPVDELPPTECEVVQGSLPSCLDGAYIRNGPNPQYLPRGPYHLF 136
PL DP LS NFAPV+E P V G +PSCL G YIRNG NP + P +HLF
Sbjct: 90 PLPKPTDPAVQLSGNFAPVNECPVQNGLEVVGQIPSCLKGVYIRNGANPMFPPLAGHHLF 149
Query: 137 DGDGMLHSIKIS-RGRATLCSRYVRTYKYTIENEAGSPILP 176
DGDGM+H++ I + + RY +T + E G + P
Sbjct: 150 DGDGMIHAVSIGFDNQVSYSCRYTKTNRLVQETALGRSVFP 190
>UNIPROTKB|O06785 [details] [associations]
symbol:MT0683 "Carotenoid cleavage oxygenase" species:1773
"Mycobacterium tuberculosis" [GO:0010436 "carotenoid dioxygenase
activity" evidence=IDA] [GO:0016118 "carotenoid catabolic process"
evidence=IDA] EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0046872 EMBL:BX842574
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055 GO:GO:0010436
PIR:A70534 RefSeq:NP_215168.1 RefSeq:NP_335094.1
RefSeq:YP_006513995.1 ProteinModelPortal:O06785 SMR:O06785
PRIDE:O06785 EnsemblBacteria:EBMYCT00000002162
EnsemblBacteria:EBMYCT00000072242 GeneID:13318540 GeneID:888089
GeneID:925966 KEGG:mtc:MT0683 KEGG:mtu:Rv0654 KEGG:mtv:RVBD_0654
PATRIC:18123223 TubercuList:Rv0654 HOGENOM:HOG000254835 OMA:HTLNAYD
ProtClustDB:CLSK790657 GO:GO:0016118 Uniprot:O06785
Length = 501
Score = 226 (84.6 bits), Expect = 2.0e-32, Sum P(2) = 2.0e-32
Identities = 66/221 (29%), Positives = 98/221 (44%)
Query: 93 APVD-ELPPTECEVVQGSLPSCLDGAYIRNGPNP-QYLPRGPYHLFDGDGMLHSIKISRG 150
APV E+ T+ V G +P LDG Y+RNGPNP + YH F GD M+H + + G
Sbjct: 19 APVSTEVTATDLPVT-GRIPEHLDGRYLRNGPNPVAEVDPATYHWFTGDAMVHGVALRDG 77
Query: 151 RATLC-SRYVRTYKYTIENEAGSPIL--PNVFSGFNXXXXXXXXXXXXXXXXXXDLPYAI 207
+A +R+VRT + G PI P+ +G +
Sbjct: 78 KARWYRNRWVRTP--AVCAALGEPISARPHPRTGIIEGGPNTNVLTHAGRTLALVEAGVV 135
Query: 208 RLTPNGDIETIGRHDFDGKLAMSMTAHPKLDSDTGEAFAFRYGPVPPF-LTYFRFDANGK 266
+++T+G DFDG L TAHP+ D TGE A Y + Y +G
Sbjct: 136 NYELTDELDTVGPCDFDGTLHGGYTAHPQRDPHTGELHAVSYSFARGHRVQYSVIGTDGH 195
Query: 267 KQPNVPIFSMTRPSFLHDFAITKKYAVFVDIQIGMNPMEMI 307
+ V I P +H F++T Y V D+ + +PM+++
Sbjct: 196 ARRTVDIEVAGSP-MMHSFSLTDNYVVIYDLPVTFDPMQVV 235
Score = 202 (76.2 bits), Expect = 2.0e-32, Sum P(2) = 2.0e-32
Identities = 68/228 (29%), Positives = 107/228 (46%)
Query: 313 PVGADPAKVCRIGIIPRYATDESQMRWFEVPGFNIIHAINAWDEEDGNAVVMVAPNILSV 372
P +P+ R+G++PR +E +RWF++ + H +NA+ E A V+V +++
Sbjct: 279 PYAWNPSYPARVGVMPREGGNED-VRWFDIEPCYVYHPLNAYSECRNGAEVLVL-DVVRY 336
Query: 373 EHTLDRT------DLVHALVEKVRIDLRTGIVTRRPMSARNLDFGVINPAYMAKKSRYVY 426
DR D +L ++ I+L TG VT R +F IN + R+ Y
Sbjct: 337 SRMFDRDRRGPGGDSRPSL-DRWTINLATGAVTAECRDDRAQEFPRINETLVGGPHRFAY 395
Query: 427 AAVGDPMPKISGVVKLDVSKGDERRDCIVATRIFG---PGCYGGEPFFVARDPENPETE- 482
VG + G +S ++DC+ + P GE FV P NP
Sbjct: 396 T-VGIEGGFLVGAGAA-LSTPLYKQDCVTGSSTVASLDPDLLIGEMVFV---P-NPSARA 449
Query: 483 EDDGYVVSYVHDENTGESKFLVMDAKSPRLDIVAAVKLPRRVPYGFHG 530
EDDG ++ Y E + L++DA++ L+ +A V LP+RVP GFHG
Sbjct: 450 EDDGILMGYGWHRGRDEGQLLLLDAQT--LESIATVHLPQRVPMGFHG 495
Score = 43 (20.2 bits), Expect = 4.5e-13, Sum P(2) = 4.5e-13
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 88 LSDNFAPVDELPPT--ECEVVQGSLPSCL 114
L+DN+ + +LP T +VV S+P L
Sbjct: 215 LTDNYVVIYDLPVTFDPMQVVPASVPRWL 243
>UNIPROTKB|Q53353 [details] [associations]
symbol:Q53353 "Lignostilbene-alpha,beta-dioxygenase isozyme
I" species:13689 "Sphingomonas paucimobilis" [GO:0005506 "iron ion
binding" evidence=IDA] [GO:0046274 "lignin catabolic process"
evidence=IDA] [GO:0050054 "lignostilbene alpha beta-dioxygenase
activity" evidence=IDA] [GO:0055114 "oxidation-reduction process"
evidence=IDA] GO:GO:0005506 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 GO:GO:0046274 EMBL:S65040 PIR:JN0595
ProteinModelPortal:Q53353 GO:GO:0050054 Uniprot:Q53353
Length = 485
Score = 244 (91.0 bits), Expect = 6.1e-26, Sum P(2) = 6.1e-26
Identities = 78/278 (28%), Positives = 123/278 (44%)
Query: 106 VQGSLPSCLDGAYIRNGPNPQYLPR-GPYHLFDGDGMLHSIKISRGRATLCSRYVRTYKY 164
++G +P L+G + R P+ Q+ PR F+GDGM+ + G+ RY +T K+
Sbjct: 28 IEGEVPPQLNGTFHRVHPDAQFPPRFEDDQFFNGDGMVSLFRFHDGKIDFRQRYAQTDKW 87
Query: 165 TIENEAG--------SPILPNV-FSGF--NXXXXXXXXXXXXXXXXXXDLPYAIRLTPNG 213
+E +AG +P+ + G D P I + P
Sbjct: 88 KVERKAGKSLFGAYRNPLTDDASVQGMIRGTANTNVMVHAGKLYAMKEDSPCLI-MDPL- 145
Query: 214 DIETIGRHDFDGKL-AMSMTAHPKLDSDTGEAFAFRYGP---VPPFLTYFRFDANGKKQP 269
+ET G +FDGKL + + AHPK+D TG AF YG + + Y GK
Sbjct: 146 TLETEGYTNFDGKLQSQTFCAHPKIDPVTGNLCAFAYGAKGLMTLDMAYIEISPTGKLLK 205
Query: 270 NVPIFSMTRPSFLHDFAITKKYAVFVDIQIGMNPMEMIFGGGSPVGADPAKVCRIGIIPR 329
+P F +HDF +T+ YAVF + + ++ + + G D C +GI+PR
Sbjct: 206 EIP-FQNPYYCMMHDFGVTEDYAVFAVMPL-LSSWDRLEQRLPFFGFDTTLPCYLGILPR 263
Query: 330 YATDESQMRWFEVPGFNIIHAINAWDEEDGNAVVMVAP 367
D +RWF+ + H +NA++ DG V + P
Sbjct: 264 NG-DARDLRWFKTGNCFVGHVMNAFN--DGTKVHIDMP 298
Score = 119 (46.9 bits), Expect = 6.1e-26, Sum P(2) = 6.1e-26
Identities = 27/70 (38%), Positives = 35/70 (50%)
Query: 461 GPGCYGGEPFFVARDPENPETEEDDGYVVSYVHDENTGESKFLVMDAKSPRLDIVAAVKL 520
GP C EP F+ R P+ PE DGYV++ V D S + DA+ +A KL
Sbjct: 407 GPRCAIQEPCFIPRSPDAPE---GDGYVIALVDDHVANYSDLAIFDAQHVDQGPIARAKL 463
Query: 521 PRRVPYGFHG 530
P R+ G HG
Sbjct: 464 PVRIRQGLHG 473
>ASPGD|ASPL0000067272 [details] [associations]
symbol:AN7062 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR011047 SUPFAM:SSF50998 EMBL:BN001304
eggNOG:COG3670 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
HOGENOM:HOG000254835 EMBL:AACD01000118 RefSeq:XP_664666.1
ProteinModelPortal:Q5AXB8 EnsemblFungi:CADANIAT00000409
GeneID:2869943 KEGG:ani:AN7062.2 OMA:FQEPIFV OrthoDB:EOG4GTPN5
Uniprot:Q5AXB8
Length = 555
Score = 218 (81.8 bits), Expect = 9.6e-21, Sum P(2) = 9.6e-21
Identities = 76/278 (27%), Positives = 119/278 (42%)
Query: 106 VQGSLPSCLDGAYIRNGPNPQYLP--RGPYHLFDGDGMLHSIKISRGRATLCSRYVRTYK 163
+ G +P+ +DG + R P+ ++ P H F+GDG + +I+I+ A RYVRT +
Sbjct: 53 ITGQIPADIDGTFFRVQPDHRFPPIYESDIH-FNGDGNVTAIRITNSTAHFKQRYVRTDR 111
Query: 164 YTIENEAG--------SPILPN-VFSGF--NXXXXXXXXXXXXXXXXXXD-LPYAIRLTP 211
+ E +AG +P N G D PYA + P
Sbjct: 112 FQAEGQAGRALFGKYRNPYTDNEAVKGVIRTAANTNIFFWRGMLLATKEDGPPYA--MDP 169
Query: 212 NGDIETIGRHDFDGK-LAMSMTAHPKLDSDTGEAFAFRY-----GPVPPF-LTYFRFDAN 264
+ETIGR+DF+G+ L+ + TAHPK D TGE + Y G + + DAN
Sbjct: 170 VS-LETIGRYDFEGQVLSPTFTAHPKFDPKTGEMVCYGYEAGGNGNDGSCDIVVYTIDAN 228
Query: 265 GKKQPNVPIFSMTRPSFLHDFAITKKYAVFVDIQIGMNPMEMIFGGGSPVGADPAKVCRI 324
G K + +HD I+ K+ V + +P E + G + DP +
Sbjct: 229 GVKTEE-SWYKAPFCGIIHDCGISDKWVVLPMTPLKCDP-ERLKKGENHWAWDPEEDQWY 286
Query: 325 GIIPRYATDESQMRWFEVPGFNIIHAINAWDEEDGNAV 362
G++PR +RW+ H ++ +D DG V
Sbjct: 287 GVVPRRGGKPGDIRWYRSKNAFQGHTVSCYDTPDGKVV 324
Score = 101 (40.6 bits), Expect = 9.6e-21, Sum P(2) = 9.6e-21
Identities = 23/78 (29%), Positives = 40/78 (51%)
Query: 461 GPGCYGGEPFFVARDPENPETEEDDGYVVSYVHDENTGESKFLVMDAKSPRLDIVAAVKL 520
GP EP F+ P TEE DGY+V+ ++ + + + DA+ +A + L
Sbjct: 445 GPCATFQEPAFI---PRAGSTEEGDGYIVALLNHLDVLRNDVCIFDARKIAQGPIAVIHL 501
Query: 521 PRRVPYGFHGLFVRQADL 538
P ++ G HG FV ++++
Sbjct: 502 PFKLRLGLHGNFVEESEI 519
>UNIPROTKB|Q52008 [details] [associations]
symbol:lsdB "Lignostilbene-alpha,beta-dioxygenase isozyme
III" species:13689 "Sphingomonas paucimobilis" [GO:0005506 "iron
ion binding" evidence=ISS] [GO:0046274 "lignin catabolic process"
evidence=IDA] [GO:0050054 "lignostilbene alpha beta-dioxygenase
activity" evidence=IDA] [GO:0055114 "oxidation-reduction process"
evidence=IDA] GO:GO:0005506 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 GO:GO:0046274 GO:GO:0050054 EMBL:S80637 PIR:JC4324
Uniprot:Q52008
Length = 490
Score = 215 (80.7 bits), Expect = 4.0e-20, Sum P(2) = 4.0e-20
Identities = 73/269 (27%), Positives = 115/269 (42%)
Query: 106 VQGSLPSCLDGAYIRNGPNPQYLPR-GPYHLFDGDGMLHSIKISRGRATLCSRYVRTYKY 164
V+G +P+ LDG + R P+ Q+ PR F+GDGM+ + G+ RY +T K+
Sbjct: 28 VEGEIPAQLDGTFHRVHPDAQFPPRFEDDQFFNGDGMVSLFRFHDGKIDFRQRYAQTDKW 87
Query: 165 TIENEAG--------SPILPNV-FSGF--NXXXXXXXXXXXXXXXXXXDLPYAIRLTPNG 213
+E +AG +P+ + G D P I + P
Sbjct: 88 KVERKAGKSLFGAYRNPLTDDASVQGMIRGTANTNVMVHAGKLYAMKEDSPCLI-MDPL- 145
Query: 214 DIETIGRHDFDGKLA-MSMTAHPKLDSDTGEAFAFRY---GPVPPFLTYFRFDANGKKQP 269
+ET G +FDGKL + +AH K+D TG F Y G + +YF D G
Sbjct: 146 TLETEGYTNFDGKLKNQTFSAHAKIDPVTGNFCNFGYAATGLLTTDCSYFEIDPAGNLLF 205
Query: 270 NVPIFSMTRPSFLHDFAITKKYAVFVDIQIGMNPMEMIFGGGSPVGADPAKVCRIGIIPR 329
F + +HD+ +T+ YA+F + N + + G G D +G++PR
Sbjct: 206 ETE-FQVPYYCMMHDYGLTEHYAIFHIVPCSPN-WDRLKAGLPHFGFDTTLPVWLGVVPR 263
Query: 330 Y-ATDESQMRWFEVPGFNII-HAINAWDE 356
+RWF+ P H +NA++E
Sbjct: 264 GPGVTNKDVRWFKAPKTIFASHVMNAFEE 292
Score = 96 (38.9 bits), Expect = 4.0e-20, Sum P(2) = 4.0e-20
Identities = 28/81 (34%), Positives = 41/81 (50%)
Query: 461 GPGCYGGEPFFVARDPENPETEEDDGYVVSYVHDENTGESKFLVMDAKSPRLDIVAAVKL 520
GP EP FV P ++ E DGY+++ V + T S +V+DA + + + KL
Sbjct: 412 GPQSIIQEPCFV---PRMADSAEGDGYIIALVDNLITNYSDLVVLDALNLKDGPIGRAKL 468
Query: 521 PRRVPYGFHGLFVRQADLDKL 541
P R+ G HG + AD KL
Sbjct: 469 PIRLRSGLHGNW---ADASKL 486
>TAIR|locus:2134093 [details] [associations]
symbol:CCD8 "carotenoid cleavage dioxygenase 8"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM;RCA;NAS] [GO:0009733 "response to auxin stimulus"
evidence=IMP] [GO:0010223 "secondary shoot formation"
evidence=IGI;IMP] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=ISS] [GO:0009570 "chloroplast
stroma" evidence=IDA] [GO:0009850 "auxin metabolic process"
evidence=IMP] [GO:0009965 "leaf morphogenesis" evidence=IMP]
[GO:0016121 "carotene catabolic process" evidence=IDA] [GO:0016124
"xanthophyll catabolic process" evidence=IDA] [GO:0009926 "auxin
polar transport" evidence=IMP] [GO:0009830 "cell wall modification
involved in abscission" evidence=RCA] GO:GO:0009570 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0009733 GO:GO:0009926 GO:GO:0046872
GO:GO:0016702 GO:GO:0009965 EMBL:AL161582 eggNOG:COG3670
OMA:ITENYIV InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
GO:GO:0016121 GO:GO:0010223 GO:GO:0016124 EMBL:AY074264
EMBL:AY133732 IPI:IPI00536697 PIR:T10688 RefSeq:NP_195007.2
UniGene:At.31633 ProteinModelPortal:Q8VY26 SMR:Q8VY26 STRING:Q8VY26
PRIDE:Q8VY26 EnsemblPlants:AT4G32810.1 GeneID:829417
KEGG:ath:AT4G32810 TAIR:At4g32810 HOGENOM:HOG000237971
InParanoid:Q8VY26 PhylomeDB:Q8VY26 ProtClustDB:CLSN2680232
BioCyc:ARA:AT4G32810-MONOMER BioCyc:MetaCyc:AT4G32810-MONOMER
Genevestigator:Q8VY26 Uniprot:Q8VY26
Length = 570
Score = 154 (59.3 bits), Expect = 8.3e-20, Sum P(3) = 8.3e-20
Identities = 45/129 (34%), Positives = 64/129 (49%)
Query: 406 RNLDFGVINPAYMAKKSRYVYAAVGD-PMPKISGVVKLDVSKGDERRDCIVATRIFGPGC 464
R +D INP Y+ +K RYVYA P + + K+D+ E++ G
Sbjct: 452 RAMDMCSINPLYLGQKYRYVYACGAQRPCNFPNALSKVDIV---EKK----VKNWHEHGM 504
Query: 465 YGGEPFFVARDPENPETEEDDGYVVSYVHDENTGESKFLVMDAKSPRLDIVAAVKLPRRV 524
EPFFV P T EDDG V+S V +EN G S +++D S + +A K P +
Sbjct: 505 IPSEPFFV---PRPGATHEDDGVVISIVSEENGG-SFAILLDGSS--FEEIARAKFPYGL 558
Query: 525 PYGFHGLFV 533
PYG HG ++
Sbjct: 559 PYGLHGCWI 567
Score = 111 (44.1 bits), Expect = 8.3e-20, Sum P(3) = 8.3e-20
Identities = 47/181 (25%), Positives = 82/181 (45%)
Query: 209 LTPNGDIETIGRHDFDGKLA--MSMTAHPKLDSDTGEAFAFRYGPVPPFLTYFRFDANGK 266
L + +ETIG+ ++D L+ M +AHP + ++T E + V P R +A
Sbjct: 227 LVDHETLETIGKFEYDDVLSDHMIQSAHP-IVTET-EMWTLIPDLVKPGYRVVRMEAGSN 284
Query: 267 KQPNVPIFSMTR----PSFLHDFAITKKYAVFVDIQIGMNPMEMIFGGGSPVGAD---PA 319
K+ V P ++H FA+T+ Y V ++ + + ++ +P+ P
Sbjct: 285 KREVVGRVRCRSGSWGPGWVHSFAVTENYVVIPEMPLRYSVKNLLRAEPTPLYKFEWCPQ 344
Query: 320 KVCRIGIIPRYATDESQMRWFEVPGFNIIHAINAWDEE---DGNAVVMVAPNILSVEHTL 376
I ++ + T E + EVP + H INA++E+ DG A V++A EH
Sbjct: 345 DGAFIHVMSKL-TGEV-VASVEVPAYVTFHFINAYEEDKNGDGKATVIIAD---CCEHNA 399
Query: 377 D 377
D
Sbjct: 400 D 400
Score = 92 (37.4 bits), Expect = 8.3e-20, Sum P(3) = 8.3e-20
Identities = 21/60 (35%), Positives = 31/60 (51%)
Query: 106 VQGSLPSCLDGAYIRNGPNPQYLPRGPY-HLFDGDGMLHSIKISRGRATLCSRYVRTYKY 164
VQG +P+ L+G Y+RNGP + + HLFDG L ++ GR R + + Y
Sbjct: 97 VQGKIPTWLNGTYLRNGPGLWNIGDHDFRHLFDGYSTLVKLQFDGGRIFAAHRLLESDAY 156
>ZFIN|ZDB-GENE-060421-7448 [details] [associations]
symbol:bco2b "beta-carotene oxygenase 2b"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
ZFIN:ZDB-GENE-060421-7448 eggNOG:COG3670
GeneTree:ENSGT00500000044783 HOGENOM:HOG000232156
HOVERGEN:HBG050679 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 KO:K10252 OrthoDB:EOG45B1FD EMBL:BX572648
EMBL:BC115259 IPI:IPI00758725 RefSeq:NP_001035402.1
UniGene:Dr.82050 Ensembl:ENSDART00000061139 GeneID:678554
KEGG:dre:678554 CTD:678554 InParanoid:Q1RLW1 OMA:LWHIGDY
NextBio:20902398 Uniprot:Q1RLW1
Length = 555
Score = 123 (48.4 bits), Expect = 4.9e-19, Sum P(3) = 4.9e-19
Identities = 29/71 (40%), Positives = 42/71 (59%)
Query: 463 GCYGGEPFFVARDPENPETEEDDGYVVSYVHDENTGESKFL-VMDAKSPRLDIVAAVKLP 521
G + EP FV+ P EEDDG ++S V N +S FL V+DAK+ + + ++P
Sbjct: 488 GMFPSEPVFVS-SPG--AVEEDDGVILSVVITPNQDKSTFLLVLDAKT--FEELGRAEVP 542
Query: 522 RRVPYGFHGLF 532
+ +PYGFHG F
Sbjct: 543 KNIPYGFHGTF 553
Score = 123 (48.4 bits), Expect = 4.9e-19, Sum P(3) = 4.9e-19
Identities = 26/76 (34%), Positives = 41/76 (53%)
Query: 96 DELPPTECEVVQGSLPSCLDGAYIRNGPNPQYLPRGPY-HLFDGDGMLHSIKISRGRATL 154
DE P + G++PS + G ++RNGP + R + H FDG +LH I G+ T
Sbjct: 43 DETPEPITTTITGNVPSWIKGNFLRNGPGKFEIGRSSFNHWFDGMALLHQFHIEDGKVTY 102
Query: 155 CSRYVRT--YKYTIEN 168
SR++ + YK +E+
Sbjct: 103 MSRFLNSDSYKENLEH 118
Score = 106 (42.4 bits), Expect = 4.9e-19, Sum P(3) = 4.9e-19
Identities = 44/169 (26%), Positives = 77/169 (45%)
Query: 215 IETIGRHDFDGKLAMS-MTAHPKLDSD-TGEAFAFRYGPVPPFLTYFRFDANGKKQPN-- 270
+ET + D+ +A++ TAHP +DSD T Y F N K+ PN
Sbjct: 183 LETKEKVDWSKFIAVNGATAHPHVDSDGTTYNMGNSYTVKGAFYNIIMVPPN-KENPNDT 241
Query: 271 ---------VPIFSMTRPSFLHDFAITKKYAVFVDIQIGMNPMEMIFG---G-GSPVGA- 316
+P ++PS+ H FA+++ Y VF++ I M+ ++++ G G G G
Sbjct: 242 LEGASVVCSIPSEDKSKPSYYHSFAMSENYVVFIEQPIKMDLLKIVTGKLRGKGINEGVY 301
Query: 317 -DPAKVCRIGIIPRYATDESQMRWFEVPGFNIIHAINAWDEEDGNAVVM 364
DP + +I + S ++++ P + H IN + ED ++M
Sbjct: 302 WDPKRNTVFHVINKRTGKLSLVKYYTKP-LSTFHQINCY--EDNGFLIM 347
Score = 41 (19.5 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 132 PYHLFDGDGMLHSIKISRGRATLCSRYVRTYKY 164
PY F G G H + S + L + ++ +K+
Sbjct: 454 PYRYFYGCGFRHLVGDSLIKMDLQGKQIKVWKH 486
>UNIPROTKB|Q2KEQ1 [details] [associations]
symbol:MGCH7_ch7g985 "Putative uncharacterized protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:CM000230 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 Uniprot:Q2KEQ1
Length = 489
Score = 221 (82.9 bits), Expect = 7.7e-19, Sum P(2) = 7.7e-19
Identities = 82/273 (30%), Positives = 125/273 (45%)
Query: 106 VQGSLPSCLDGAYIRNGPNPQYLPRGPYHLFDGDGMLHSIKISRGRATLCSRYVRTYKYT 165
VQGS+P +D + R P+P +LP+ F+GDG + + +I GR RYV+T K+
Sbjct: 38 VQGSIPPEIDDTFYRVMPDP-HLPQW----FNGDGNISAFRIKDGRCDFKQRYVQTEKFV 92
Query: 166 --IENEAGSPILPNVFSGFNXXXXXXXXXXXXXXXXXXDLPYAIRLTPNGDIETIGRHDF 223
N+ + V S N PY L P +ET+ F
Sbjct: 93 RKYRNKYTDAVEFKVRSTANTNIIYFNGRLLACKEDSP--PYC--LDPE-TLETMWLETF 147
Query: 224 DGKL-AMSMTAHPKLDSDTGEAFAFRY---GPVPPFLTYFRFDANGKKQPNVPIFSMTRP 279
DG+L +++ TAHPK+D+ TGE F Y G P + YF FD KK + + P
Sbjct: 148 DGQLPSLTFTAHPKVDAHTGELICFGYEARGDGTPDVCYFTFD---KKAAILETVWLVAP 204
Query: 280 --SFLHDFAITKKYAVFVD-IQIG-----MNPMEMIFGGGSPV-GADPAKVCRIGII-PR 329
+ +HDFA+T+ + ++ ++ G NP + G P GA + + + PR
Sbjct: 205 VVAMIHDFAVTENWTCDLERMEKGGEHWQWNPDIPFYLGVLPRRGAKGSDIKPADQLNPR 264
Query: 330 YATDESQMRWFEVPGFNIIHAINAWDEEDGNAV 362
Q WF+ P H +NA+++E GN V
Sbjct: 265 RPFPPRQ--WFKAPNSFPGHTVNAYEDESGNIV 295
Score = 77 (32.2 bits), Expect = 7.7e-19, Sum P(2) = 7.7e-19
Identities = 59/214 (27%), Positives = 82/214 (38%)
Query: 333 DESQMRWFEVPGFNIIHAINAWDEEDGNAVVMVAPNILSVEHTLDRTDLVHALVEK---V 389
DES F++P N + W + GN+ V T D L E
Sbjct: 289 DESGNIVFDLPLTNT-NVFFWWPDAQGNSPDPKEIAARLVRFTFDPRSAERDLPEPEVLC 347
Query: 390 RIDLRTGIVTRRPMSARNLD--FGVINPAYMAKKSRYV-YAAVGDPMPKISGVVKLDVSK 446
R+D V R AR+ F + +PA + + G PM G LD +
Sbjct: 348 RLDCEFPRVDDRVSMARHARAFFDMTDPALPTDMAAIMRLGGGGHPMYNCIG--HLDYAT 405
Query: 447 GDERRDCIVATRIFGPGCYG--GEPFFVARDPENPETEEDDGYVVSYVHDENTGESKFLV 504
G R D R F PG EP V R + PE DG+VV V++ S+ +
Sbjct: 406 G--RLD-----RYF-PGSTHLVQEPVVVPRSRDVPE---GDGWVVVLVNNYANMSSELHI 454
Query: 505 MDAKSPRLDIVAAVKLPRRVPYGFHGLFVRQADL 538
+D + A V LP R+ G HG +V D+
Sbjct: 455 VDTRDLS-KAQAIVYLPVRLRAGLHGNWVDAGDI 487
>ASPGD|ASPL0000046682 [details] [associations]
symbol:AN1643 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] EMBL:BN001307 GO:GO:0016702 EMBL:AACD01000026
eggNOG:COG3670 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
OMA:HGAWVPR HOGENOM:HOG000254835 OrthoDB:EOG4GTPN5
RefSeq:XP_659247.1 ProteinModelPortal:Q5BCT7
EnsemblFungi:CADANIAT00008281 GeneID:2875358 KEGG:ani:AN1643.2
Uniprot:Q5BCT7
Length = 480
Score = 210 (79.0 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
Identities = 89/342 (26%), Positives = 146/342 (42%)
Query: 106 VQGSLPSCLDGAYIRNGPNPQYLPRGPYHLFDGDGMLHSIKISRGRATLCSRYVRTYKYT 165
V G +P +DG + R P+PQ LP P+ + D + + K R R + KY
Sbjct: 32 VYGEIPKDIDGVFYRVMPDPQ-LP--PF-IEDDPRYVQTEKFVREREAQRALLAGLGKY- 86
Query: 166 IENEAGSPILPNVFSGFNXXXXXXXXXXXXXXXXXXDLPYAIRLTPNGDIETIGRHDFDG 225
N + V S N PYA L P ++T G +DF+G
Sbjct: 87 -RNRFTDAVELKVRSTANTNVVFFNGQLLALKEDSP--PYA--LDPV-TLDTKGLYDFEG 140
Query: 226 KL-AMSMTAHPKLDSDTGEAFAFRY---GPVPPFLTYFRFDANGKKQPNVPIFSMTRPSF 281
+L +++ TAHPK D TGE F Y G P + Y+ GK V + + +
Sbjct: 141 QLPSLTFTAHPKFDPATGEMVCFGYEARGDGTPDVCYYSVSPTGKFTEVVWLVAPV-VAM 199
Query: 282 LHDFAITKKYAVFVDIQIGMNPMEMIFGGGSPVGADPAKVCRIGIIPRYATDESQMRWFE 341
+HDFA+T + +F I + +E + GG P +G++PR +++WF
Sbjct: 200 IHDFAVTDNWVIFPIIP-QVCDLERMKQGGEHWQWSPETPFYLGVMPRRGAKAEEVKWFR 258
Query: 342 VPGFNIIHAINAWDEEDGNAVV---MVAPNIL-----SVEHTLDRTDLVHALVEKVRIDL 393
H NA++ E G+ V+ + N+ + + + + +V LV + ID
Sbjct: 259 YMNSFPGHTANAYENEQGHLVIDLGLSEKNVFFWWPDAQGNAPEPSSIVSQLV-RFTIDP 317
Query: 394 RTGIVT-RRP--MSARNLDFGVINPAYMAKKSRYVYAAVGDP 432
+T +T R P + N +F I+ + + R+ Y + DP
Sbjct: 318 QTEDLTLREPEVLQEGNSEFYRIDDRFATRPYRHCYFDLMDP 359
Score = 86 (35.3 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
Identities = 43/156 (27%), Positives = 70/156 (44%)
Query: 387 EKVRIDLRTGIVTRRPMSARNLDFGVINPAYMAKKSRYVYAAVGDPMPKISGVVKLDVSK 446
E RID R RP R+ F +++P R + +G P + + LD +
Sbjct: 336 EFYRIDDR---FATRPY--RHCYFDLMDPQLGTDFER-IGTKIGGGFPLYNSLAHLDHTT 389
Query: 447 GDERRDCIVATRIFGPGCYG--GEPFFVARDPENPETEEDDGYVVSYVHDENTGESKFLV 504
G ++ PG EP F+ R +N TE DG+V++ V++ +T S+ +
Sbjct: 390 GQ--------VEVYFPGRTHLVQEPVFIPR--KNSSTE-GDGHVLALVNNYDTMASELHL 438
Query: 505 MDAKS-PRLDIVAAVKLPRRVPYGFHGLFVRQADLD 539
+D + R A + LP R+ G HG +V +D D
Sbjct: 439 LDTRDFARAQ--AKILLPVRLRQGLHGSWVDASDDD 472
>UNIPROTKB|Q83CU2 [details] [associations]
symbol:CBU_1011 "Lignostilbene-alpha,beta-dioxygenase"
species:227377 "Coxiella burnetii RSA 493" [GO:0008152 "metabolic
process" evidence=ISS] [GO:0016702 "oxidoreductase activity, acting
on single donors with incorporation of molecular oxygen,
incorporation of two atoms of oxygen" evidence=ISS] EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0016702 HOGENOM:HOG000232156
OMA:ITENYIV InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
RefSeq:NP_820017.1 GeneID:1208907 KEGG:cbu:CBU_1011 PATRIC:17930741
ProtClustDB:CLSK914477 BioCyc:CBUR227377:GJ7S-1002-MONOMER
Uniprot:Q83CU2
Length = 394
Score = 238 (88.8 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 90/353 (25%), Positives = 160/353 (45%)
Query: 202 DLPYAIRLTPNGDIETIGRHDFDGKLAMSMT-AHPKLDSDTGEAFAF-RYGPVPPFLTYF 259
+ P I P +E +G +++ KL ++T AHP D +T E + +
Sbjct: 60 ETPMPIVFDPQ-TLERMGVINYEDKLKGNLTTAHPHYDFETKEGINYLTVFSAKSTSQIY 118
Query: 260 RFDANGKKQPNVPIFSMTRPSFLHDFAITKKYAVFVDIQIGMNPMEMIFGGGSPV---GA 316
R + K + + + P ++H F +T+ Y + + +NP+ ++ G +
Sbjct: 119 RVSHHSKTRELLGSIPVKEPGYMHSFGMTQNYVILAEYPFFVNPLNLLLNGNPFIENFNW 178
Query: 317 DPAKVCRIGIIPRYATDESQMRWFEVPGFNIIHAINAWDEEDGNAVVMVA-PNI------ 369
P K ++ R T + Q ++ F H +NA++E D V ++A PN
Sbjct: 179 KPNKGTHFYLLDR-KTGKFQN--YKTESFFAFHHVNAFEENDKVIVDIIAYPNTDIIQSL 235
Query: 370 -LSVEHTLDRTDLVHA-LVEKVRIDLRTGIVTRRPMSARNLDFGVINPAYMAKKSRYVYA 427
L V H ++V A + + I+L V +S ++ IN +++ Y++
Sbjct: 236 YLDVLHGETNKNIVSAGELRRYEINLLDSSVNYVVLSEEPIELPRIN-YFLSNTKNYLFV 294
Query: 428 -AVG----DPMPKISGVVKLDVSKGDERRDCIVATRIFGPG-CYGGEPFFVARDPENPET 481
VG DP ++ ++K+DV + AT+I+ CY GEP FV+ P N +
Sbjct: 295 YGVGSDKNDPNNFLNRLLKIDVQQK--------ATKIWKETMCYPGEPVFVSL-P-NAK- 343
Query: 482 EEDDGYVVSYVHDENTGESKFLVMDAKSPRLDIVAAVKLPRRVPYGFHGLFVR 534
+EDDG ++S V + G S L++DA S +A +P +P+GFHG F +
Sbjct: 344 KEDDGVILSVVLNAQKGNSFLLILDAVS--FKEIARASVPHHIPFGFHGQFYK 394
>TIGR_CMR|CBU_1011 [details] [associations]
symbol:CBU_1011 "dioxygenase, putative" species:227377
"Coxiella burnetii RSA 493" [GO:0008152 "metabolic process"
evidence=ISS] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=ISS] EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0016702 HOGENOM:HOG000232156
OMA:ITENYIV InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
RefSeq:NP_820017.1 GeneID:1208907 KEGG:cbu:CBU_1011 PATRIC:17930741
ProtClustDB:CLSK914477 BioCyc:CBUR227377:GJ7S-1002-MONOMER
Uniprot:Q83CU2
Length = 394
Score = 238 (88.8 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 90/353 (25%), Positives = 160/353 (45%)
Query: 202 DLPYAIRLTPNGDIETIGRHDFDGKLAMSMT-AHPKLDSDTGEAFAF-RYGPVPPFLTYF 259
+ P I P +E +G +++ KL ++T AHP D +T E + +
Sbjct: 60 ETPMPIVFDPQ-TLERMGVINYEDKLKGNLTTAHPHYDFETKEGINYLTVFSAKSTSQIY 118
Query: 260 RFDANGKKQPNVPIFSMTRPSFLHDFAITKKYAVFVDIQIGMNPMEMIFGGGSPV---GA 316
R + K + + + P ++H F +T+ Y + + +NP+ ++ G +
Sbjct: 119 RVSHHSKTRELLGSIPVKEPGYMHSFGMTQNYVILAEYPFFVNPLNLLLNGNPFIENFNW 178
Query: 317 DPAKVCRIGIIPRYATDESQMRWFEVPGFNIIHAINAWDEEDGNAVVMVA-PNI------ 369
P K ++ R T + Q ++ F H +NA++E D V ++A PN
Sbjct: 179 KPNKGTHFYLLDR-KTGKFQN--YKTESFFAFHHVNAFEENDKVIVDIIAYPNTDIIQSL 235
Query: 370 -LSVEHTLDRTDLVHA-LVEKVRIDLRTGIVTRRPMSARNLDFGVINPAYMAKKSRYVYA 427
L V H ++V A + + I+L V +S ++ IN +++ Y++
Sbjct: 236 YLDVLHGETNKNIVSAGELRRYEINLLDSSVNYVVLSEEPIELPRIN-YFLSNTKNYLFV 294
Query: 428 -AVG----DPMPKISGVVKLDVSKGDERRDCIVATRIFGPG-CYGGEPFFVARDPENPET 481
VG DP ++ ++K+DV + AT+I+ CY GEP FV+ P N +
Sbjct: 295 YGVGSDKNDPNNFLNRLLKIDVQQK--------ATKIWKETMCYPGEPVFVSL-P-NAK- 343
Query: 482 EEDDGYVVSYVHDENTGESKFLVMDAKSPRLDIVAAVKLPRRVPYGFHGLFVR 534
+EDDG ++S V + G S L++DA S +A +P +P+GFHG F +
Sbjct: 344 KEDDGVILSVVLNAQKGNSFLLILDAVS--FKEIARASVPHHIPFGFHGQFYK 394
>MGI|MGI:2177469 [details] [associations]
symbol:Bco2 "beta-carotene oxygenase 2" species:10090 "Mus
musculus" [GO:0005622 "intracellular" evidence=IC] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0016116 "carotenoid metabolic
process" evidence=IMP] [GO:0016119 "carotene metabolic process"
evidence=ISO;IDA] [GO:0016121 "carotene catabolic process"
evidence=ISO;IDA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=ISO;IDA] [GO:0042573 "retinoic
acid metabolic process" evidence=NAS] [GO:0042574 "retinal
metabolic process" evidence=NAS] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051881 "regulation of mitochondrial membrane
potential" evidence=IMP] [GO:0055114 "oxidation-reduction process"
evidence=ISO;IDA] [GO:2000377 "regulation of reactive oxygen
species metabolic process" evidence=IMP] MGI:MGI:2177469
GO:GO:0005739 GO:GO:0046872 GO:GO:0051881 GO:GO:0016702
GO:GO:0042573 GO:GO:0042574 eggNOG:COG3670
GeneTree:ENSGT00500000044783 HOGENOM:HOG000232156
HOVERGEN:HBG050679 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 CTD:83875 KO:K10252 OMA:VSLNAPE OrthoDB:EOG45B1FD
GO:GO:0016121 GO:GO:0016116 GO:GO:2000377 EMBL:AJ290392
IPI:IPI00118726 RefSeq:NP_573480.1 UniGene:Mm.390149
ProteinModelPortal:Q99NF1 SMR:Q99NF1 PhosphoSite:Q99NF1
PaxDb:Q99NF1 PRIDE:Q99NF1 Ensembl:ENSMUST00000119103 GeneID:170752
KEGG:mmu:170752 InParanoid:Q99NF1 NextBio:370330 Bgee:Q99NF1
Genevestigator:Q99NF1 GermOnline:ENSMUSG00000032066 Uniprot:Q99NF1
Length = 532
Score = 125 (49.1 bits), Expect = 4.4e-17, Sum P(3) = 4.4e-17
Identities = 32/72 (44%), Positives = 40/72 (55%)
Query: 463 GCYGGEPFFVARDPENPETEEDDGYVVSYVHDENTGESKFL-VMDAKSPRLDIVAAVKLP 521
G Y EP FV P EED G ++S V N ES FL V+DAKS + ++P
Sbjct: 464 GFYPSEPVFV---PVPGADEEDSGVILSVVITPNQSESNFLLVLDAKS--FTELGRAEVP 518
Query: 522 RRVPYGFHGLFV 533
++PYGFHG FV
Sbjct: 519 VQMPYGFHGTFV 530
Score = 105 (42.0 bits), Expect = 4.4e-17, Sum P(3) = 4.4e-17
Identities = 25/75 (33%), Positives = 40/75 (53%)
Query: 106 VQGSLPSCLDGAYIRNGPNPQYLPRGPY-HLFDGDGMLHSIKISRGRATLCSRYVRTYKY 164
V+G +P L+G +R GP + Y H FDG +LH ++ RG T S+++++ Y
Sbjct: 29 VRGHIPEWLNGYLLRVGPGKFEFGKDRYNHWFDGMALLHQFRMERGTVTYKSKFLQSDTY 88
Query: 165 TIENEAGSPILPNVF 179
N AG I+ + F
Sbjct: 89 KA-NSAGGRIVISEF 102
Score = 102 (41.0 bits), Expect = 4.4e-17, Sum P(3) = 4.4e-17
Identities = 47/173 (27%), Positives = 75/173 (43%)
Query: 214 DIETIGRH---DFDGKLAMS-MTAHPKLDSDTGEAFAF--RYGPVPPFLTYFRFDANGKK 267
DIE + R D+ +A++ TAHP D D G A+ YGP R KK
Sbjct: 155 DIEMLERTEKVDWSKFIAVNGATAHPHYDPD-GTAYNMGNSYGPRGSCYNIIRVPPK-KK 212
Query: 268 QPNVPI--------FSMT---RPSFLHDFAITKKYAVFVDIQIGMNPMEMIFGG--GSP- 313
+P I + T +PS+ H F +TK Y +FV+ + M ++I G P
Sbjct: 213 EPGETIHGAQVLCSIASTEKMKPSYYHSFGMTKNYIIFVEQPVKMKLWKIITSKIRGKPF 272
Query: 314 ---VGADPAKVCRIGIIPRYATDESQMRWFEVPGFNIIHAINAWDEEDGNAVV 363
+ +P R ++ ++ ++ +P F H INA+ E+ G V+
Sbjct: 273 ADGISWEPQYNTRFHVVDKHTGQLLPGMYYSMP-FLTYHQINAF-EDQGCIVI 323
>MGI|MGI:98001 [details] [associations]
symbol:Rpe65 "retinal pigment epithelium 65" species:10090
"Mus musculus" [GO:0004744 "retinal isomerase activity"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007468 "regulation of rhodopsin gene expression"
evidence=IMP] [GO:0007601 "visual perception" evidence=IMP]
[GO:0008286 "insulin receptor signaling pathway" evidence=IMP]
[GO:0016020 "membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016853 "isomerase activity"
evidence=IEA] [GO:0042574 "retinal metabolic process" evidence=IMP]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0050896 "response to stimulus" evidence=IEA] [GO:0052884
"all-trans-retinyl-palmitate hydrolase, 11-cis retinol forming
activity" evidence=IEA] [GO:0052885 "all-trans-retinyl-ester
hydrolase, 11-cis retinol forming activity" evidence=IEA]
[GO:0060041 "retina development in camera-type eye" evidence=IMP]
[GO:0060042 "retina morphogenesis in camera-type eye" evidence=IMP]
[GO:0071257 "cellular response to electrical stimulus"
evidence=IMP] MGI:MGI:98001 GO:GO:0005783 GO:GO:0005886
GO:GO:0008286 GO:GO:0046872 GO:GO:0007601 GO:GO:0042574
eggNOG:COG3670 HOGENOM:HOG000232156 HOVERGEN:HBG050679
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055 GO:GO:0031090
GO:GO:0007468 GO:GO:0071257 GO:GO:0060042 GO:GO:0004744
OrthoDB:EOG47M1XK GO:GO:0052885 GO:GO:0052884 EMBL:AF410461
EMBL:AC163272 EMBL:AH011240 IPI:IPI00131304 UniGene:Mm.131708
ProteinModelPortal:Q91ZQ5 SMR:Q91ZQ5 STRING:Q91ZQ5
PhosphoSite:Q91ZQ5 PRIDE:Q91ZQ5 InParanoid:Q91ZQ5 CleanEx:MM_RPE65
Genevestigator:Q91ZQ5 GermOnline:ENSMUSG00000028174 Uniprot:Q91ZQ5
Length = 533
Score = 113 (44.8 bits), Expect = 3.0e-16, Sum P(3) = 3.0e-16
Identities = 27/74 (36%), Positives = 35/74 (47%)
Query: 92 FAPVDELPPTECEVVQGSLPSCLDGAYIRNGPNPQYLPRGP-YHLFDGDGMLHSIKISRG 150
F V+EL V G +P L G+ +R GP + P YHLFDG +LH G
Sbjct: 16 FETVEELSSPLTAHVTGRIPLWLTGSLLRCGPGLFEVGSEPFYHLFDGQALLHKFDFKEG 75
Query: 151 RATLCSRYVRTYKY 164
T R++RT Y
Sbjct: 76 HVTYHRRFIRTDAY 89
Score = 108 (43.1 bits), Expect = 3.0e-16, Sum P(3) = 3.0e-16
Identities = 29/75 (38%), Positives = 40/75 (53%)
Query: 462 PGCYGGEPFFVARDPENPETEEDDGYVVSYVHDENTGESK--FLVMDAKSPRLDIVAAVK 519
P Y EP FV++ P+ EEDDG V+S V G+ LV++AK L +A +
Sbjct: 463 PDSYPSEPIFVSQ-PD--ALEEDDGVVLSVVVSPGAGQKPAYLLVLNAKD--LSEIARAE 517
Query: 520 LPRRVPYGFHGLFVR 534
+ +P FHGLF R
Sbjct: 518 VETNIPVTFHGLFKR 532
Score = 104 (41.7 bits), Expect = 3.0e-16, Sum P(3) = 3.0e-16
Identities = 46/181 (25%), Positives = 82/181 (45%)
Query: 205 YAIRLTPNGDIETIGRHDFDGKLAMS-MTAHPKLDSDT---------GEAFAFRYG--PV 252
+ ++ P +ETI + D ++++ TAHP ++SD G+ F Y +
Sbjct: 151 FITKINPE-TLETIKQVDLCNYISVNGATAHPHIESDGTVYNIGNCFGKNFTVAYNIIKI 209
Query: 253 PPFLTYFRFDANGKKQPNV--PIFSMTRPSFLHDFAITKKYAVFVDIQIGMNPMEMIFGG 310
PP L + D K + V P +PS++H F +T Y VFV+ + +N + +
Sbjct: 210 PP-LKADKEDPINKSEVVVQFPCSDRFKPSYVHSFGLTPNYIVFVETPVKINLFKFL-SS 267
Query: 311 GSPVGADPAKVCR----IGIIPRYATDESQMRWFE----VPGFNIIHAINAWDEEDGNAV 362
S GA+ +G+ A D+ + ++F FN+ H IN + E++G +
Sbjct: 268 WSLWGANYMDCFESNESMGVWLHVA-DKKRRKYFNNKYRTSPFNLFHHINTY-EDNGFLI 325
Query: 363 V 363
V
Sbjct: 326 V 326
>ZFIN|ZDB-GENE-040426-1191 [details] [associations]
symbol:bcmo1b "beta-carotene 15,15'-monooxygenase
1b" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND]
ZFIN:ZDB-GENE-040426-1191 eggNOG:COG3670 HOGENOM:HOG000232156
HOVERGEN:HBG050679 KO:K00515 OrthoDB:EOG4G7BZ5 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 EMBL:BC056789 IPI:IPI00503910
RefSeq:NP_956902.1 UniGene:Dr.84019 ProteinModelPortal:Q6PGY1
STRING:Q6PGY1 GeneID:393580 KEGG:dre:393580 CTD:393580
InParanoid:Q6PGY1 NextBio:20814600 Uniprot:Q6PGY1
Length = 525
Score = 121 (47.7 bits), Expect = 3.7e-16, Sum P(3) = 3.7e-16
Identities = 40/129 (31%), Positives = 60/129 (46%)
Query: 406 RNLDFGVINPAYMAKKSRYVYAAVGDPMPKISGVVKLDVSKGDERRDCIVATRIFGPGCY 465
+ L+ IN + +KK+RY Y + P + V K+DV + + T CY
Sbjct: 404 KGLELPAINYKFNSKKNRYFYGTRVEWSPYPNKVAKVDVVTRTHK----IWTE---EECY 456
Query: 466 GGEPFFVARDPENPETEEDDGYVVSYVHDENTGESKFLV-MDAKSPRLDIVAAVKLPRRV 524
EP F+A P+ +EDDG ++S V N FLV +DAKS +A + +
Sbjct: 457 PSEPVFIA-SPD--AVDEDDGVILSSVVSFNPQRPPFLVVLDAKS--FKEIARATIDASI 511
Query: 525 PYGFHGLFV 533
HGLF+
Sbjct: 512 HMDLHGLFI 520
Score = 103 (41.3 bits), Expect = 3.7e-16, Sum P(3) = 3.7e-16
Identities = 33/98 (33%), Positives = 47/98 (47%)
Query: 97 ELP-PTECEVVQGSLPSCLDGAYIRNGPNPQYLPRGPY-HLFDGDGMLHSIKISRGRATL 154
E P P + +V GS+P L G +RNGP + Y H FDG ++HS G
Sbjct: 11 ETPEPLKADV-SGSIPPWLQGTLLRNGPGLFSVGNTSYKHWFDGMALIHSFTFKDGEVFY 69
Query: 155 CSRYVR--TYKYTIE------NEAGSPILP----NVFS 180
S+Y++ TYK I +E G+ + P N+FS
Sbjct: 70 RSKYLKSETYKKNIAADRIVVSEFGTMVYPDPCKNIFS 107
Score = 99 (39.9 bits), Expect = 3.7e-16, Sum P(3) = 3.7e-16
Identities = 40/171 (23%), Positives = 77/171 (45%)
Query: 215 IETIGRHDFDGKLAMSM-TAHPKLDSDTGEAFAFRYGPVP---PFLTYFRFDANGK---- 266
+ET+GR ++ +A+++ TAHP D + G + + P F+ AN
Sbjct: 152 LETLGRTNYRNHIAINLATAHPHYDEE-GNTYNMGTAIMNLGRPKYVIFKVPANTSDKEN 210
Query: 267 KQP---------NVPIFSMTRPSFLHDFAITKKYAVFVDIQIGMNPMEMI------FGGG 311
K+P ++PI PS+ H F +T+ Y +FV+ ++ +++ G
Sbjct: 211 KKPALSEVEQVCSIPIRPSLYPSYFHSFGMTENYIIFVEQAFKLDIVKLATAYFRDINWG 270
Query: 312 SPVGADPAKVCRIGIIPRYATDESQMRWFEVPGFNIIHAINAWDEEDGNAV 362
S + D + ++ + ++++ P F H INA+ E+DG+ V
Sbjct: 271 SCLKFDQDDINVFHLVNKKTGKAVSVKYYTDP-FVTFHHINAY-EDDGHVV 319
>RGD|621396 [details] [associations]
symbol:Rpe65 "retinal pigment epithelium 65" species:10116
"Rattus norvegicus" [GO:0001654 "eye development" evidence=NAS]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=IEA]
[GO:0031090 "organelle membrane" evidence=IEA] [GO:0042574 "retinal
metabolic process" evidence=IMP] [GO:0044297 "cell body"
evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0050896 "response to stimulus" evidence=IEA] [GO:0052884
"all-trans-retinyl-palmitate hydrolase, 11-cis retinol forming
activity" evidence=IEA] [GO:0052885 "all-trans-retinyl-ester
hydrolase, 11-cis retinol forming activity" evidence=IMP]
RGD:621396 GO:GO:0005783 GO:GO:0005886 GO:GO:0046872 GO:GO:0007601
GO:GO:0050896 GO:GO:0016853 GO:GO:0042574 GO:GO:0044297
GO:GO:0001654 HOVERGEN:HBG050679 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 GO:GO:0031090 GO:GO:0052885
GO:GO:0052884 CTD:6121 KO:K11158 EMBL:AF035673 IPI:IPI00196676
RefSeq:NP_446014.1 UniGene:Rn.76724 ProteinModelPortal:O70276
GeneID:89826 KEGG:rno:89826 NextBio:617740 Genevestigator:O70276
Uniprot:O70276
Length = 533
Score = 114 (45.2 bits), Expect = 5.9e-16, Sum P(3) = 5.9e-16
Identities = 27/74 (36%), Positives = 35/74 (47%)
Query: 92 FAPVDELPPTECEVVQGSLPSCLDGAYIRNGPNPQYLPRGP-YHLFDGDGMLHSIKISRG 150
F V+EL V G +P L G+ +R GP + P YHLFDG +LH G
Sbjct: 16 FETVEELSTPLTAHVTGRIPLWLTGSLLRCGPGLFEVGSEPFYHLFDGQALLHKFDFKEG 75
Query: 151 RATLCSRYVRTYKY 164
T R++RT Y
Sbjct: 76 HVTYYRRFIRTDAY 89
Score = 105 (42.0 bits), Expect = 5.9e-16, Sum P(3) = 5.9e-16
Identities = 28/73 (38%), Positives = 39/73 (53%)
Query: 462 PGCYGGEPFFVARDPENPETEEDDGYVVSYVHDENTGESK--FLVMDAKSPRLDIVAAVK 519
P Y EP FV++ P+ EEDDG V+S V G+ LV++AK L +A +
Sbjct: 463 PDSYPSEPIFVSQ-PD--ALEEDDGVVLSVVVSPGAGQKPAYLLVLNAKD--LSEIARAE 517
Query: 520 LPRRVPYGFHGLF 532
+ +P FHGLF
Sbjct: 518 VETNIPVTFHGLF 530
Score = 103 (41.3 bits), Expect = 5.9e-16, Sum P(3) = 5.9e-16
Identities = 46/181 (25%), Positives = 82/181 (45%)
Query: 205 YAIRLTPNGDIETIGRHDFDGKLAMS-MTAHPKLDSDT---------GEAFAFRYG--PV 252
+ ++ P +ETI + D ++++ TAHP ++SD G+ F Y +
Sbjct: 151 FITKINPE-TLETIKQVDLCNYVSVNGATAHPHIESDGTVYNIGNCFGKNFTVAYNIIKI 209
Query: 253 PPFLTYFRFDANGKKQPNV--PIFSMTRPSFLHDFAITKKYAVFVDIQIGMNPMEMIFGG 310
PP L + D K + V P +PS++H F +T Y VFV+ + +N + +
Sbjct: 210 PP-LKADKEDPINKSEVVVQFPCSDRFKPSYVHSFGLTPNYIVFVETPVKINLFKFL-SS 267
Query: 311 GSPVGADPAKVCR----IGIIPRYATDESQMRWFE----VPGFNIIHAINAWDEEDGNAV 362
S GA+ +G+ A D+ + ++F FN+ H IN + E++G +
Sbjct: 268 WSLWGANYMDCFESNESMGVWLHVA-DKKRRKYFNNKYRTSPFNLFHHINTY-EDNGFLI 325
Query: 363 V 363
V
Sbjct: 326 V 326
>UNIPROTKB|E1C8E0 [details] [associations]
symbol:BCO2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0016116
"carotenoid metabolic process" evidence=IEA] [GO:0016121 "carotene
catabolic process" evidence=IEA] [GO:0016702 "oxidoreductase
activity, acting on single donors with incorporation of molecular
oxygen, incorporation of two atoms of oxygen" evidence=IEA]
[GO:0051881 "regulation of mitochondrial membrane potential"
evidence=IEA] [GO:2000377 "regulation of reactive oxygen species
metabolic process" evidence=IEA] GO:GO:0055114
GeneTree:ENSGT00500000044783 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 OMA:VSLNAPE GO:GO:0016121 EMBL:AADN02058015
IPI:IPI00602723 Ensembl:ENSGALT00000012775 Uniprot:E1C8E0
Length = 548
Score = 119 (46.9 bits), Expect = 5.9e-16, Sum P(3) = 5.9e-16
Identities = 27/103 (26%), Positives = 50/103 (48%)
Query: 70 INNFIDPPLK--YSVDPRHVLSDNFAPVDELPPTECEVVQGSLPSCLDGAYIRNGPNPQY 127
+ N + PL+ +++ +S V+E P ++G +P ++G +RNGP
Sbjct: 7 LKNSLPSPLEEQFTLPTLQCISPLLQTVEETPEPIPAKIKGHIPGWINGNLLRNGPGKFE 66
Query: 128 LPRGPY-HLFDGDGMLHSIKISRGRATLCSRYVRTYKYTIENE 169
Y H FDG +LH ++ G T S+++++ Y I N+
Sbjct: 67 FGEEKYNHWFDGMALLHQFQLRNGTVTYQSKFLQSNSYLINNQ 109
Score = 115 (45.5 bits), Expect = 5.9e-16, Sum P(3) = 5.9e-16
Identities = 42/127 (33%), Positives = 63/127 (49%)
Query: 408 LDFGVINPA-YMAKKSRYVYAAVGDPMPKISGVVKLDVSKGDERRDCIVATRIFGPGCYG 466
L+F IN + Y +K RY Y G ++K+DV E ++ + G Y
Sbjct: 432 LEFPQINYSQYSGRKYRYFYGC-GFRHFIGDSLMKVDV----ETKNFKIWQE---DGSYP 483
Query: 467 GEPFFVARDPENPETEEDDGYVVSYVHDENTGESKFL-VMDAKSPRLDIVAAVKLPRRVP 525
EP FV P T ED G ++S V + S FL V+DA++ R + ++P ++P
Sbjct: 484 SEPVFV---PVPNATAEDSGVILSVVISPDENRSAFLLVLDAETFRE--LGRAEVPVQMP 538
Query: 526 YGFHGLF 532
YGFHG+F
Sbjct: 539 YGFHGIF 545
Score = 88 (36.0 bits), Expect = 5.9e-16, Sum P(3) = 5.9e-16
Identities = 24/93 (25%), Positives = 44/93 (47%)
Query: 278 RPSFLHDFAITKKYAVFVDIQIGMNPMEMIFGG--GSPVGA----DPAKVCRIGIIPRYA 331
+PS+ H F +++ Y +F++ I +N + +I G P+ +P R ++ +
Sbjct: 250 KPSYYHSFGMSENYIIFIEQPIKLNLLRIITSKFRGKPISEGINWEPQYNTRFHVVDKRT 309
Query: 332 TDESQMRWFEVPGFNIIHAINAWDEEDGNAVVM 364
+W+ P F H INA+ ED VV+
Sbjct: 310 GKVLPGQWYTKP-FVTFHQINAF--EDRGCVVL 339
>UNIPROTKB|E2RS36 [details] [associations]
symbol:BCO2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000377 "regulation of reactive oxygen
species metabolic process" evidence=IEA] [GO:0051881 "regulation of
mitochondrial membrane potential" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016121 "carotene catabolic process"
evidence=IEA] [GO:0016116 "carotenoid metabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
GO:GO:0055114 GeneTree:ENSGT00500000044783 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 OMA:VSLNAPE GO:GO:0016121
EMBL:AAEX03003490 Ensembl:ENSCAFT00000022164 NextBio:20854619
Uniprot:E2RS36
Length = 575
Score = 121 (47.7 bits), Expect = 1.8e-15, Sum P(3) = 1.8e-15
Identities = 30/72 (41%), Positives = 41/72 (56%)
Query: 463 GCYGGEPFFVARDPENPETEEDDGYVVSYVHDENTGESKFL-VMDAKSPRLDIVAAVKLP 521
G Y EP FV P EED G ++S V + E+ FL V+DAK+ + + ++P
Sbjct: 507 GFYPSEPVFV---PAPGTREEDGGVILSVVITPDQNENNFLLVLDAKN--FEELGRAEVP 561
Query: 522 RRVPYGFHGLFV 533
R+PYGFHG FV
Sbjct: 562 VRMPYGFHGTFV 573
Score = 107 (42.7 bits), Expect = 1.8e-15, Sum P(3) = 1.8e-15
Identities = 32/101 (31%), Positives = 48/101 (47%)
Query: 95 VDELPPTECEVVQGSLPSCLDGAYIRNGPNPQYLPRGPY-HLFDGDGMLHSIKISRGRAT 153
V+E+P V+G P L G +R GP + Y H FDG +LH ++ +G T
Sbjct: 61 VEEMPQMVSAQVRGQFPEWLSGYLLRIGPGKFEFGKDEYSHWFDGMALLHQFRMEKGTVT 120
Query: 154 LCSRYVR--TYKYT------IENEAGSPILP----NVFSGF 182
S++++ TYK + +E G+ LP NVF F
Sbjct: 121 YRSKFLQSDTYKANSAHDRIVISEFGTLALPDPCKNVFERF 161
Score = 90 (36.7 bits), Expect = 1.8e-15, Sum P(3) = 1.8e-15
Identities = 45/175 (25%), Positives = 76/175 (43%)
Query: 214 DIETIGRH---DFDGKLAMS-MTAHPKLDSDTGEAFAF--RYGP---------VPPFLTY 258
DI+T+ + D+ +A++ TAHP D D G A+ YGP +PP
Sbjct: 198 DIKTLEKTEKVDWSKFIAVNGATAHPHYDPD-GTAYNMGNSYGPHGSCYNVIQIPPEKVD 256
Query: 259 FRFDANGKKQPNVPIFSMTR--PSFLHDFAITKKYAVFVDIQIGMNPMEMI--------F 308
+G Q I S R PS+ H F +T+ Y +F++ + MN +++ F
Sbjct: 257 LGETVHGA-QVICSIASAERMKPSYYHSFGMTRNYIIFIEQPLKMNLWKIVTSRIRGKAF 315
Query: 309 GGGSPVGADPAKVCRIGIIPRYATDESQMRWFEVPGFNIIHAINAWDEEDGNAVV 363
G + +P R ++ ++ ++ P F H INA+ E+ G V+
Sbjct: 316 SDG--ISWEPQYNTRFHVVDKHTGQLLPGMYYTKP-FVTFHQINAF-EDQGCVVI 366
>UNIPROTKB|Q8HXG8 [details] [associations]
symbol:BCO2 "Beta,beta-carotene 9',10'-oxygenase"
species:9541 "Macaca fascicularis" [GO:0016119 "carotene metabolic
process" evidence=ISS] [GO:0016702 "oxidoreductase activity, acting
on single donors with incorporation of molecular oxygen,
incorporation of two atoms of oxygen" evidence=ISS] GO:GO:0005739
GO:GO:0046872 GO:GO:0016702 HOVERGEN:HBG050679 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 EMBL:AB097557
ProteinModelPortal:Q8HXG8 GO:GO:0016119 Uniprot:Q8HXG8
Length = 556
Score = 124 (48.7 bits), Expect = 1.8e-15, Sum P(3) = 1.8e-15
Identities = 30/72 (41%), Positives = 41/72 (56%)
Query: 463 GCYGGEPFFVARDPENPETEEDDGYVVSYVHDENTGESKFL-VMDAKSPRLDIVAAVKLP 521
G Y EP FV P EED G ++S V N ES FL V+DAK+ + + ++P
Sbjct: 488 GFYPSEPVFV---PVPGTNEEDGGVILSVVITPNQNESNFLLVLDAKN--FEELGRAEVP 542
Query: 522 RRVPYGFHGLFV 533
++PYGFHG F+
Sbjct: 543 VQMPYGFHGTFI 554
Score = 101 (40.6 bits), Expect = 1.8e-15, Sum P(3) = 1.8e-15
Identities = 26/86 (30%), Positives = 44/86 (51%)
Query: 95 VDELPPTECEVVQGSLPSCLDGAYIRNGPNPQYLPRGPY-HLFDGDGMLHSIKISRGRAT 153
V+E P V G P L+G+ +R GP + Y H FDG +LH ++++G T
Sbjct: 38 VEEAPRGISARVWGHFPKWLNGSLLRIGPGKFEFGKDKYNHWFDGMALLHQFRMAKGTVT 97
Query: 154 LCSRYVRTYKYTIENEAGSPILPNVF 179
S+++++ Y N A + I+ + F
Sbjct: 98 YRSKFLQSDTYKA-NSAKNRIVMSEF 122
Score = 92 (37.4 bits), Expect = 1.8e-15, Sum P(3) = 1.8e-15
Identities = 43/172 (25%), Positives = 75/172 (43%)
Query: 214 DIETIGRH---DFDGKLAMS-MTAHPKLDSDTGEAFAF--RYGP---------VPPFLTY 258
DIET+ + D+ +A++ TAHP D D G A+ +GP VPP
Sbjct: 179 DIETLEKTEKVDWSKFIAVNGATAHPHYDPD-GTAYNMGNSFGPFGFSYKVIRVPPEKVD 237
Query: 259 FRFDANGKKQP-NVPIFSMTRPSFLHDFAITKKYAVFVDIQIGMNPMEM----IFGGGSP 313
+G + ++ +PS+ H F +T+ Y +F++ + MN ++ I G
Sbjct: 238 LEETTHGAQVICSIAPTEKGKPSYYHSFGMTRNYIIFIEQPLKMNLWKIATSKIRGKAFS 297
Query: 314 VGADPAKVC--RIGIIPRYATDESQMRWFEVPGFNIIHAINAWDEEDGNAVV 363
G C R ++ ++ R++ P F H INA+ E+ G ++
Sbjct: 298 DGISWEPQCNTRFHVVDKHTGQLLPGRYYSKP-FVAFHHINAF-EDQGCVII 347
>UNIPROTKB|F1PXT9 [details] [associations]
symbol:RPE65 "Retinoid isomerohydrolase" species:9615
"Canis lupus familiaris" [GO:0071257 "cellular response to
electrical stimulus" evidence=IEA] [GO:0060042 "retina
morphogenesis in camera-type eye" evidence=IEA] [GO:0042574
"retinal metabolic process" evidence=IEA] [GO:0008286 "insulin
receptor signaling pathway" evidence=IEA] [GO:0007601 "visual
perception" evidence=IEA] [GO:0007468 "regulation of rhodopsin gene
expression" evidence=IEA] [GO:0004744 "retinal isomerase activity"
evidence=IEA] GeneTree:ENSGT00500000044783 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 OMA:WLHVADK EMBL:AAEX03004935
EMBL:AAEX03004936 Ensembl:ENSCAFT00000032537 Uniprot:F1PXT9
Length = 533
Score = 113 (44.8 bits), Expect = 2.5e-15, Sum P(3) = 2.5e-15
Identities = 27/74 (36%), Positives = 35/74 (47%)
Query: 92 FAPVDELPPTECEVVQGSLPSCLDGAYIRNGPNPQYLPRGP-YHLFDGDGMLHSIKISRG 150
F V+EL V G +P L G+ +R GP + P YHLFDG +LH G
Sbjct: 16 FETVEELSSPLTAHVTGRIPLWLTGSLLRCGPGLFEVGSEPFYHLFDGQALLHKFDFKEG 75
Query: 151 RATLCSRYVRTYKY 164
T R++RT Y
Sbjct: 76 HVTYHRRFIRTDAY 89
Score = 102 (41.0 bits), Expect = 2.5e-15, Sum P(3) = 2.5e-15
Identities = 28/73 (38%), Positives = 38/73 (52%)
Query: 462 PGCYGGEPFFVARDPENPETEEDDGYVVSYVHDENTGESK--FLVMDAKSPRLDIVAAVK 519
P Y EP FV+ P+ EEDDG V+S V G+ L+++AK L VA +
Sbjct: 463 PDSYPSEPIFVSH-PD--ALEEDDGVVLSVVVSPGAGQKPAYLLILNAKD--LSEVARAE 517
Query: 520 LPRRVPYGFHGLF 532
+ +P FHGLF
Sbjct: 518 VEINIPVTFHGLF 530
Score = 101 (40.6 bits), Expect = 2.5e-15, Sum P(3) = 2.5e-15
Identities = 41/176 (23%), Positives = 81/176 (46%)
Query: 205 YAIRLTPNGDIETIGRHDFDGKLAMS-MTAHPKLDSDT---------GEAFAFRYG--PV 252
+ ++ P +ETI + D ++++ TAHP +++D G+ F+ Y +
Sbjct: 151 FITKINPE-TLETIKQVDLCNYVSVNGATAHPHIENDGTVYNIGNCFGKNFSIAYNIVKI 209
Query: 253 PPFLTYFRFDANGKKQPNV--PIFSMTRPSFLHDFAITKKYAVFVDIQIGMNPMEMIFGG 310
PP L + D K + V P +PS++H F +T Y VFV+ + +N ++ +
Sbjct: 210 PP-LQADKEDPISKSEVVVQFPCSDRFKPSYVHSFGLTPNYIVFVETPVKINLLKFL-SS 267
Query: 311 GSPVGADPAKVCR----IGIIPRYATDESQMRW----FEVPGFNIIHAINAWDEED 358
S GA+ +G+ A D+ + ++ + FN+ H IN +++ +
Sbjct: 268 WSLWGANYMDCFESNETMGVWLHIA-DKKRKKYLNNKYRTSSFNLFHHINTYEDNE 322
>UNIPROTKB|Q9TVB8 [details] [associations]
symbol:RPE65 "Retinoid isomerohydrolase" species:9615
"Canis lupus familiaris" [GO:0031090 "organelle membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0052885 "all-trans-retinyl-ester hydrolase, 11-cis retinol
forming activity" evidence=IEA] [GO:0052884
"all-trans-retinyl-palmitate hydrolase, 11-cis retinol forming
activity" evidence=IEA] [GO:0050896 "response to stimulus"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0016853 "isomerase activity" evidence=IEA] [GO:0007601 "visual
perception" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] GO:GO:0005783 GO:GO:0005886 GO:GO:0046872
GO:GO:0007601 GO:GO:0050896 GO:GO:0016853 eggNOG:COG3670
HOGENOM:HOG000232156 HOVERGEN:HBG050679 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 GO:GO:0031090 OrthoDB:EOG47M1XK
GO:GO:0052885 GO:GO:0052884 CTD:6121 KO:K11158 EMBL:AF084537
EMBL:Y16567 EMBL:AJ506754 EMBL:AJ506755 EMBL:AJ506756 EMBL:AJ506757
EMBL:AJ251207 EMBL:AJ506759 RefSeq:NP_001003176.1 UniGene:Cfa.3665
ProteinModelPortal:Q9TVB8 STRING:Q9TVB8 GeneID:403803
KEGG:cfa:403803 InParanoid:Q9TVB8 NextBio:20817300 Uniprot:Q9TVB8
Length = 533
Score = 113 (44.8 bits), Expect = 2.5e-15, Sum P(3) = 2.5e-15
Identities = 27/74 (36%), Positives = 35/74 (47%)
Query: 92 FAPVDELPPTECEVVQGSLPSCLDGAYIRNGPNPQYLPRGP-YHLFDGDGMLHSIKISRG 150
F V+EL V G +P L G+ +R GP + P YHLFDG +LH G
Sbjct: 16 FETVEELSSPLTAHVTGRIPLWLTGSLLRCGPGLFEVGSEPFYHLFDGQALLHKFDFKEG 75
Query: 151 RATLCSRYVRTYKY 164
T R++RT Y
Sbjct: 76 HVTYHRRFIRTDAY 89
Score = 102 (41.0 bits), Expect = 2.5e-15, Sum P(3) = 2.5e-15
Identities = 28/73 (38%), Positives = 38/73 (52%)
Query: 462 PGCYGGEPFFVARDPENPETEEDDGYVVSYVHDENTGESK--FLVMDAKSPRLDIVAAVK 519
P Y EP FV+ P+ EEDDG V+S V G+ L+++AK L VA +
Sbjct: 463 PDSYPSEPIFVSH-PD--ALEEDDGVVLSVVVSPGAGQKPAYLLILNAKD--LSEVARAE 517
Query: 520 LPRRVPYGFHGLF 532
+ +P FHGLF
Sbjct: 518 VEINIPVTFHGLF 530
Score = 101 (40.6 bits), Expect = 2.5e-15, Sum P(3) = 2.5e-15
Identities = 41/176 (23%), Positives = 81/176 (46%)
Query: 205 YAIRLTPNGDIETIGRHDFDGKLAMS-MTAHPKLDSDT---------GEAFAFRYG--PV 252
+ ++ P +ETI + D ++++ TAHP +++D G+ F+ Y +
Sbjct: 151 FITKINPE-TLETIKQVDLCNYVSVNGATAHPHIENDGTVYNIGNCFGKNFSIAYNIVKI 209
Query: 253 PPFLTYFRFDANGKKQPNV--PIFSMTRPSFLHDFAITKKYAVFVDIQIGMNPMEMIFGG 310
PP L + D K + V P +PS++H F +T Y VFV+ + +N ++ +
Sbjct: 210 PP-LQADKEDPISKSEVVVQFPCSDRFKPSYVHSFGLTPNYIVFVETPVKINLLKFL-SS 267
Query: 311 GSPVGADPAKVCR----IGIIPRYATDESQMRW----FEVPGFNIIHAINAWDEED 358
S GA+ +G+ A D+ + ++ + FN+ H IN +++ +
Sbjct: 268 WSLWGANYMDCFESNETMGVWLHIA-DKKRKKYLNNKYRTSSFNLFHHINTYEDNE 322
>UNIPROTKB|F1S830 [details] [associations]
symbol:RPE65 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071257 "cellular response to electrical stimulus"
evidence=IEA] [GO:0060042 "retina morphogenesis in camera-type eye"
evidence=IEA] [GO:0042574 "retinal metabolic process" evidence=IEA]
[GO:0008286 "insulin receptor signaling pathway" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0007468
"regulation of rhodopsin gene expression" evidence=IEA] [GO:0004744
"retinal isomerase activity" evidence=IEA]
GeneTree:ENSGT00500000044783 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 OMA:WLHVADK EMBL:CU929726 Ensembl:ENSSSCT00000004199
Uniprot:F1S830
Length = 533
Score = 113 (44.8 bits), Expect = 3.9e-15, Sum P(3) = 3.9e-15
Identities = 27/74 (36%), Positives = 35/74 (47%)
Query: 92 FAPVDELPPTECEVVQGSLPSCLDGAYIRNGPNPQYLPRGP-YHLFDGDGMLHSIKISRG 150
F V+EL V G +P L G+ +R GP + P YHLFDG +LH G
Sbjct: 16 FETVEELSSPLTAHVTGRIPLWLTGSLLRCGPGLFEVGSEPFYHLFDGQALLHKFDFKEG 75
Query: 151 RATLCSRYVRTYKY 164
T R++RT Y
Sbjct: 76 HVTYHRRFIRTDAY 89
Score = 105 (42.0 bits), Expect = 3.9e-15, Sum P(3) = 3.9e-15
Identities = 29/73 (39%), Positives = 38/73 (52%)
Query: 462 PGCYGGEPFFVARDPENPETEEDDGYVVSYVHDENTGESK--FLVMDAKSPRLDIVAAVK 519
P Y EP FVA P+ EEDDG V+S V G+ L+++AK L VA +
Sbjct: 463 PDSYPSEPIFVAH-PD--ALEEDDGVVLSVVVSPGAGQKPAYLLILNAKD--LSEVARAE 517
Query: 520 LPRRVPYGFHGLF 532
+ +P FHGLF
Sbjct: 518 VEINIPVTFHGLF 530
Score = 96 (38.9 bits), Expect = 3.9e-15, Sum P(3) = 3.9e-15
Identities = 41/176 (23%), Positives = 80/176 (45%)
Query: 205 YAIRLTPNGDIETIGRHDFDGKLAMS-MTAHPKLDSDT---------GEAFAFRYG--PV 252
+ ++ P +ETI + D ++++ TAHP +++D G+ F+ Y +
Sbjct: 151 FITKINPE-TLETIKQVDLCNYVSVNGATAHPHIENDGTVYNIGNCFGKNFSIAYNIVKI 209
Query: 253 PPFLTYFRFDANGKKQPNV--PIFSMTRPSFLHDFAITKKYAVFVDIQIGMNPMEMIFGG 310
PP L + D K + V P +PS++H F +T Y VFV+ + +N + +
Sbjct: 210 PP-LQADKQDPISKSEIVVQFPCSDRFKPSYVHSFGLTPNYIVFVETPVKINLFKFL-SS 267
Query: 311 GSPVGADPAKVCR----IGIIPRYATDESQMRW----FEVPGFNIIHAINAWDEED 358
S GA+ +G+ A D+ + ++ + FN+ H IN +++ +
Sbjct: 268 WSLWGANYMDCFESNETMGVWLHIA-DKKRKKYLNNKYRTSPFNLFHHINTYEDNE 322
>ZFIN|ZDB-GENE-010509-1 [details] [associations]
symbol:bco2l "beta-carotene 15, 15-dioxygenase 2,
like" species:7955 "Danio rerio" [GO:0016702 "oxidoreductase
activity, acting on single donors with incorporation of molecular
oxygen, incorporation of two atoms of oxygen" evidence=IEA]
ZFIN:ZDB-GENE-010509-1 GO:GO:0016702 HOVERGEN:HBG050679
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055 EMBL:AJ290391
IPI:IPI00493963 RefSeq:NP_571874.1 UniGene:Dr.79440 GeneID:84041
KEGG:dre:84041 CTD:84041 InParanoid:Q90WH3 NextBio:20934203
ArrayExpress:Q90WH3 Uniprot:Q90WH3
Length = 549
Score = 128 (50.1 bits), Expect = 4.1e-15, Sum P(3) = 4.1e-15
Identities = 25/86 (29%), Positives = 49/86 (56%)
Query: 95 VDELPPTECEVVQGSLPSCLDGAYIRNGPNPQYLPRGPY-HLFDGDGMLHSIKISRGRAT 153
V+E+P +++G +PS ++G+++RNGP + H FDG ++H I G+ T
Sbjct: 34 VEEIPDPITTLIKGQIPSWINGSFLRNGPGKFEFGESKFTHWFDGMALMHRFNIKDGQVT 93
Query: 154 LCSRYVRTYKYTIENEAGSPILPNVF 179
SR++++ Y ++N + I+ + F
Sbjct: 94 YSSRFLQSDSY-VQNSEKNRIVVSEF 118
Score = 112 (44.5 bits), Expect = 4.1e-15, Sum P(3) = 4.1e-15
Identities = 42/127 (33%), Positives = 63/127 (49%)
Query: 408 LDFGVINPA-YMAKKSRYVYAAVGDPMPKISGVVKLDVSKGDERRDCIVATRIFGPGCYG 466
L+F IN A Y A+ RY YA G ++K+D+ +G + + A G +
Sbjct: 432 LEFPQINYANYNARPYRYFYAC-GFGHVFGDSLLKMDL-EGKKLKVWRHA------GLFP 483
Query: 467 GEPFFVARDPENPETEEDDGYVVSYVHDENTGESKFL-VMDAKSPRLDIVAAVKLPRRVP 525
EP F+ P +EDDG V+S + +S FL V+DAK+ + ++P +P
Sbjct: 484 SEPVFI---PAPDAQDEDDGVVMSVIITPREKKSSFLLVLDAKT--FTELGRAEVPVDIP 538
Query: 526 YGFHGLF 532
YG HGLF
Sbjct: 539 YGTHGLF 545
Score = 73 (30.8 bits), Expect = 4.1e-15, Sum P(3) = 4.1e-15
Identities = 40/170 (23%), Positives = 75/170 (44%)
Query: 215 IETIGRHDFDGKLAMSM-TAHPKLDSDTGEAFAF--RYGPVPPFLTYFRFDANGKKQPN- 270
+ET + D+ +A+S TAHP D + G + YG F R G+KQ +
Sbjct: 175 LETKEKVDWSKFIAVSAATAHPHYDRE-GATYNMGNSYGRKGFFYHILRVPP-GEKQDDD 232
Query: 271 -----------VPIFSMTRPSFLHDFAITKKYAVFVDIQIGMNPME-MIF--GGGS---P 313
+P +PS+ H F +++ Y VF++ I ++ ++ M++ G S
Sbjct: 233 ADLSGAEILCSIPAADPRKPSYYHSFVMSENYIVFIEQPIKLDLLKFMLYRIAGKSFHKV 292
Query: 314 VGADPAKVCRIGIIPRYATDESQMRWFEVPGFNIIHAINAWDEEDGNAVV 363
+ +P + R+ +++ F +H INA+ EE+G ++
Sbjct: 293 MSWNPELDTIFHVADRHTGQLLNTKYYSSAMF-ALHQINAY-EENGYLIM 340
>UNIPROTKB|Q16518 [details] [associations]
symbol:RPE65 "Retinoid isomerohydrolase" species:9606 "Homo
sapiens" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0052884
"all-trans-retinyl-palmitate hydrolase, 11-cis retinol forming
activity" evidence=IEA] [GO:0052885 "all-trans-retinyl-ester
hydrolase, 11-cis retinol forming activity" evidence=IEA]
[GO:0004744 "retinal isomerase activity" evidence=IEA] [GO:0007468
"regulation of rhodopsin gene expression" evidence=IEA] [GO:0007601
"visual perception" evidence=IEA] [GO:0008286 "insulin receptor
signaling pathway" evidence=IEA] [GO:0042574 "retinal metabolic
process" evidence=IEA] [GO:0060042 "retina morphogenesis in
camera-type eye" evidence=IEA] [GO:0071257 "cellular response to
electrical stimulus" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0031090 "organelle membrane" evidence=IEA]
[GO:0006776 "vitamin A metabolic process" evidence=TAS]
GO:GO:0005783 GO:GO:0005886 GO:GO:0046872 EMBL:CH471059
GO:GO:0007601 Orphanet:791 GO:GO:0050896 GO:GO:0016853 Orphanet:65
GO:GO:0006776 eggNOG:COG3670 HOGENOM:HOG000232156
HOVERGEN:HBG050679 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 GO:GO:0031090 Orphanet:180 OrthoDB:EOG47M1XK
GO:GO:0052885 GO:GO:0052884 CTD:6121 KO:K11158 EMBL:U18991
EMBL:U20510 EMBL:U20476 EMBL:U20477 EMBL:U20478 EMBL:U20479
EMBL:U20481 EMBL:U20482 EMBL:U20484 EMBL:U20485 EMBL:U20486
EMBL:AF039868 EMBL:AF039855 EMBL:AF039856 EMBL:AF039857
EMBL:AF039858 EMBL:AF039859 EMBL:AF039860 EMBL:AF039861
EMBL:AF039862 EMBL:AF039863 EMBL:AF039864 EMBL:AF039865
EMBL:AF039866 EMBL:AF039867 EMBL:AL139413 EMBL:BC075035
EMBL:BC075036 IPI:IPI00029250 RefSeq:NP_000320.1 UniGene:Hs.2133
ProteinModelPortal:Q16518 SMR:Q16518 STRING:Q16518
PhosphoSite:Q16518 DMDM:44888872 PRIDE:Q16518
Ensembl:ENST00000262340 GeneID:6121 KEGG:hsa:6121 UCSC:uc001dei.1
GeneCards:GC01M068894 HGNC:HGNC:10294 MIM:180069 MIM:204100
MIM:613794 neXtProt:NX_Q16518 PharmGKB:PA34655 InParanoid:Q16518
OMA:WLHVADK PhylomeDB:Q16518 BioCyc:MetaCyc:ENSG00000116745-MONOMER
ChiTaRS:RPE65 GenomeRNAi:6121 NextBio:23773 ArrayExpress:Q16518
Bgee:Q16518 CleanEx:HS_RPE65 Genevestigator:Q16518
GermOnline:ENSG00000116745 Uniprot:Q16518
Length = 533
Score = 113 (44.8 bits), Expect = 5.0e-15, Sum P(3) = 5.0e-15
Identities = 27/74 (36%), Positives = 35/74 (47%)
Query: 92 FAPVDELPPTECEVVQGSLPSCLDGAYIRNGPNPQYLPRGP-YHLFDGDGMLHSIKISRG 150
F V+EL V G +P L G+ +R GP + P YHLFDG +LH G
Sbjct: 16 FETVEELSSPLTAHVTGRIPLWLTGSLLRCGPGLFEVGSEPFYHLFDGQALLHKFDFKEG 75
Query: 151 RATLCSRYVRTYKY 164
T R++RT Y
Sbjct: 76 HVTYHRRFIRTDAY 89
Score = 102 (41.0 bits), Expect = 5.0e-15, Sum P(3) = 5.0e-15
Identities = 28/73 (38%), Positives = 38/73 (52%)
Query: 462 PGCYGGEPFFVARDPENPETEEDDGYVVSYVHDENTGESK--FLVMDAKSPRLDIVAAVK 519
P Y EP FV+ P+ EEDDG V+S V G+ L+++AK L VA +
Sbjct: 463 PDSYPSEPIFVSH-PD--ALEEDDGVVLSVVVSPGAGQKPAYLLILNAKD--LSEVARAE 517
Query: 520 LPRRVPYGFHGLF 532
+ +P FHGLF
Sbjct: 518 VEINIPVTFHGLF 530
Score = 98 (39.6 bits), Expect = 5.0e-15, Sum P(3) = 5.0e-15
Identities = 44/181 (24%), Positives = 83/181 (45%)
Query: 205 YAIRLTPNGDIETIGRHDFDGKLAMS-MTAHPKLDSDT---------GEAFAFRYG--PV 252
+ ++ P +ETI + D ++++ TAHP +++D G+ F+ Y +
Sbjct: 151 FITKINPE-TLETIKQVDLCNYVSVNGATAHPHIENDGTVYNIGNCFGKNFSIAYNIVKI 209
Query: 253 PPFLTYFRFDANGKKQPNV--PIFSMTRPSFLHDFAITKKYAVFVDIQIGMNPMEMIFGG 310
PP L + D K + V P +PS++H F +T Y VFV+ + +N + +
Sbjct: 210 PP-LQADKEDPISKSEIVVQFPCSDRFKPSYVHSFGLTPNYIVFVETPVKINLFKFL-SS 267
Query: 311 GSPVGADPAKVCR----IGIIPRYATDESQMRW----FEVPGFNIIHAINAWDEEDGNAV 362
S GA+ +G+ A D+ + ++ + FN+ H IN + E++G +
Sbjct: 268 WSLWGANYMDCFESNETMGVWLHIA-DKKRKKYLNNKYRTSPFNLFHHINTY-EDNGFLI 325
Query: 363 V 363
V
Sbjct: 326 V 326
>UNIPROTKB|Q9YGX2 [details] [associations]
symbol:RPE65 "Retinoid isomerohydrolase" species:9031
"Gallus gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0016853
"isomerase activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0050896 "response to stimulus" evidence=IEA]
[GO:0052884 "all-trans-retinyl-palmitate hydrolase, 11-cis retinol
forming activity" evidence=IEA] [GO:0052885
"all-trans-retinyl-ester hydrolase, 11-cis retinol forming
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0031090 "organelle membrane" evidence=IEA] GO:GO:0005783
GO:GO:0005886 GO:GO:0046872 GO:GO:0007601 GO:GO:0050896
GO:GO:0016853 eggNOG:COG3670 HOGENOM:HOG000232156
HOVERGEN:HBG050679 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 GO:GO:0031090 OrthoDB:EOG47M1XK GO:GO:0052885
GO:GO:0052884 CTD:6121 KO:K11158 EMBL:AB017594 IPI:IPI00584895
RefSeq:NP_990215.1 UniGene:Gga.408 ProteinModelPortal:Q9YGX2
STRING:Q9YGX2 GeneID:395700 KEGG:gga:395700 InParanoid:Q9YGX2
NextBio:20815770 Uniprot:Q9YGX2
Length = 533
Score = 117 (46.2 bits), Expect = 7.4e-15, Sum P(3) = 7.4e-15
Identities = 28/74 (37%), Positives = 36/74 (48%)
Query: 92 FAPVDELPPTECEVVQGSLPSCLDGAYIRNGPNPQYLPRGP-YHLFDGDGMLHSIKISRG 150
F V+EL V G +P+ L G+ +R GP + P YHLFDG +LH G
Sbjct: 16 FETVEELSSPVTAHVTGRIPTWLRGSLLRCGPGLFEVGAEPFYHLFDGQALLHKFDFKEG 75
Query: 151 RATLCSRYVRTYKY 164
T R+VRT Y
Sbjct: 76 HVTYHRRFVRTDAY 89
Score = 101 (40.6 bits), Expect = 7.4e-15, Sum P(3) = 7.4e-15
Identities = 28/75 (37%), Positives = 39/75 (52%)
Query: 462 PGCYGGEPFFVARDPENPETEEDDGYVVSYVHDENTGESK--FLVMDAKSPRLDIVAAVK 519
P Y EP FV+ P+ EEDDG V+S V +G L+++AK + VA +
Sbjct: 463 PDSYPSEPIFVSH-PD--ALEEDDGVVLSIVISPGSGPKPAYLLILNAKD--MSEVARAE 517
Query: 520 LPRRVPYGFHGLFVR 534
+ +P FHGLF R
Sbjct: 518 VEVNIPVTFHGLFKR 532
Score = 93 (37.8 bits), Expect = 7.4e-15, Sum P(3) = 7.4e-15
Identities = 44/181 (24%), Positives = 84/181 (46%)
Query: 205 YAIRLTPNGDIETIGRHDFDGKLAMS-MTAHPKLDSDT---------GEAFAFRYG--PV 252
+ ++ P+ +ETI + D ++++ TAHP +++D G+ F+ Y +
Sbjct: 151 FITKINPD-TLETIKQVDLCKYVSVNGATAHPHVENDGTVYNIGNCFGKNFSLAYNIIRI 209
Query: 253 PPFLTYFRFDANGKKQPNV--PIFSMTRPSFLHDFAITKKYAVFVDIQIGMNPMEMIFGG 310
PP L + D K + V P +PS++H F +T Y VFV+ + +N ++ +
Sbjct: 210 PP-LQADKEDPMNKSEVVVQFPCSDRFKPSYVHSFGLTPNYIVFVETPVKINLLKFL-SS 267
Query: 311 GSPVGADPAKVCR----IGIIPRYATDESQMRWFEVP----GFNIIHAINAWDEEDGNAV 362
S GA+ +G+ A ++ + R + FN+ H IN + E++G +
Sbjct: 268 WSLWGANYMDCFESNETMGVWLHVA-EKKKGRLLNIKYRTSAFNLFHHINTF-EDNGFLI 325
Query: 363 V 363
V
Sbjct: 326 V 326
>UNIPROTKB|Q9BYV7 [details] [associations]
symbol:BCO2 "Beta,beta-carotene 9',10'-oxygenase"
species:9606 "Homo sapiens" [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0016119 "carotene metabolic process"
evidence=IDA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IDA] [GO:0042573 "retinoic acid
metabolic process" evidence=NAS] [GO:0042574 "retinal metabolic
process" evidence=NAS] [GO:0005622 "intracellular" evidence=IC]
[GO:0055114 "oxidation-reduction process" evidence=IDA] [GO:0016121
"carotene catabolic process" evidence=IDA] [GO:0005739
"mitochondrion" evidence=ISS;TAS] [GO:0016116 "carotenoid metabolic
process" evidence=ISS] [GO:0051881 "regulation of mitochondrial
membrane potential" evidence=ISS] [GO:2000377 "regulation of
reactive oxygen species metabolic process" evidence=ISS]
GO:GO:0005739 GO:GO:0046872 GO:GO:0051881 GO:GO:0016702
GO:GO:0042573 GO:GO:0042574 eggNOG:COG3670 HOGENOM:HOG000232156
HOVERGEN:HBG050679 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 EMBL:AF276432 EMBL:AK027801 EMBL:EF444956
EMBL:AP002884 EMBL:AJ290393 IPI:IPI00472555 IPI:IPI00479961
IPI:IPI00978312 RefSeq:NP_001032367.2 RefSeq:NP_001243326.1
UniGene:Hs.728325 ProteinModelPortal:Q9BYV7 SMR:Q9BYV7
STRING:Q9BYV7 PhosphoSite:Q9BYV7 DMDM:308153680 PaxDb:Q9BYV7
PRIDE:Q9BYV7 Ensembl:ENST00000357685 Ensembl:ENST00000393032
Ensembl:ENST00000438022 Ensembl:ENST00000526088
Ensembl:ENST00000531169 GeneID:83875 KEGG:hsa:83875 UCSC:uc001pne.1
UCSC:uc009yyn.3 CTD:83875 GeneCards:GC11P112046 HGNC:HGNC:18503
HPA:HPA039825 HPA:HPA040695 MIM:611740 neXtProt:NX_Q9BYV7
PharmGKB:PA162377424 InParanoid:Q9BYV7 KO:K10252 OMA:VSLNAPE
OrthoDB:EOG45B1FD BioCyc:MetaCyc:G66-33846-MONOMER ChiTaRS:BCO2
GenomeRNAi:83875 NextBio:72911 ArrayExpress:Q9BYV7 Bgee:Q9BYV7
CleanEx:HS_BCO2 Genevestigator:Q9BYV7 GermOnline:ENSG00000197580
GO:GO:0016121 GO:GO:0016116 GO:GO:2000377 Uniprot:Q9BYV7
Length = 579
Score = 125 (49.1 bits), Expect = 8.7e-15, Sum P(3) = 8.7e-15
Identities = 30/72 (41%), Positives = 41/72 (56%)
Query: 463 GCYGGEPFFVARDPENPETEEDDGYVVSYVHDENTGESKF-LVMDAKSPRLDIVAAVKLP 521
G Y EP FV P EED G ++S V N ES F LV+DAK+ + + ++P
Sbjct: 511 GFYPSEPVFV---PAPGTNEEDGGVILSVVITPNQNESNFILVLDAKN--FEELGRAEVP 565
Query: 522 RRVPYGFHGLFV 533
++PYGFHG F+
Sbjct: 566 VQMPYGFHGTFI 577
Score = 101 (40.6 bits), Expect = 8.7e-15, Sum P(3) = 8.7e-15
Identities = 32/101 (31%), Positives = 49/101 (48%)
Query: 95 VDELPPTECEVVQGSLPSCLDGAYIRNGPNPQYLPRGPY-HLFDGDGMLHSIKISRGRAT 153
V+E P V G P L+G+ +R GP + Y H FDG +LH ++++G T
Sbjct: 61 VEEAPRGISARVWGHFPKWLNGSLLRIGPGKFEFGKDKYNHWFDGMALLHQFRMAKGTVT 120
Query: 154 LCSRYVR--TYKYT------IENEAGSPILP----NVFSGF 182
S++++ TYK + +E G+ LP NVF F
Sbjct: 121 YRSKFLQSDTYKANSAKNRIVISEFGTLALPDPCKNVFERF 161
Score = 85 (35.0 bits), Expect = 8.7e-15, Sum P(3) = 8.7e-15
Identities = 43/172 (25%), Positives = 74/172 (43%)
Query: 214 DIETIGRH---DFDGKLAMS-MTAHPKLDSDTGEAFAF--RYGP---------VPPFLTY 258
DIET+ + D+ +A++ TAHP D D G A+ +GP VPP
Sbjct: 202 DIETLEKTEKVDWSKFIAVNGATAHPHYDLD-GTAYNMGNSFGPYGFSYKVIRVPPEKVD 260
Query: 259 FRFDANGKKQP-NVPIFSMTRPSFLHDFAITKKYAVFVDIQIGMNPMEM----IFGGGSP 313
+G + ++ +PS+ H F +T+ Y +F++ + MN ++ I G
Sbjct: 261 LGETIHGVQVICSIASTEKGKPSYYHSFGMTRNYIIFIEQPLKMNLWKIATSKIRGKAFS 320
Query: 314 VGADPAKVC--RIGIIPRYATDESQMRWFEVPGFNIIHAINAWDEEDGNAVV 363
G C R ++ + R++ P F H INA+ E+ G ++
Sbjct: 321 DGISWEPQCNTRFHVVEKRTGQLLPGRYYSKP-FVTFHQINAF-EDQGCVII 370
>UNIPROTKB|F1SM94 [details] [associations]
symbol:BCO2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000377 "regulation of reactive oxygen species
metabolic process" evidence=IEA] [GO:0051881 "regulation of
mitochondrial membrane potential" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016121 "carotene catabolic process"
evidence=IEA] [GO:0016116 "carotenoid metabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
GO:GO:0055114 GeneTree:ENSGT00500000044783 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 CTD:83875 KO:K10252 OMA:VSLNAPE
GO:GO:0016121 EMBL:CU657951 RefSeq:XP_003129902.2 UniGene:Ssc.25348
Ensembl:ENSSSCT00000016405 GeneID:100517547 KEGG:ssc:100517547
Uniprot:F1SM94
Length = 575
Score = 117 (46.2 bits), Expect = 1.0e-14, Sum P(3) = 1.0e-14
Identities = 29/70 (41%), Positives = 39/70 (55%)
Query: 465 YGGEPFFVARDPENPETEEDDGYVVSYVHDENTGESKFL-VMDAKSPRLDIVAAVKLPRR 523
Y EP FV P EED G ++S V N E FL V+DAK+ + + ++P +
Sbjct: 509 YPSEPIFV---PVPGTNEEDGGVILSVVITPNQNERNFLLVLDAKN--FEELGRAEVPVQ 563
Query: 524 VPYGFHGLFV 533
+PYGFHG FV
Sbjct: 564 MPYGFHGTFV 573
Score = 104 (41.7 bits), Expect = 1.0e-14, Sum P(3) = 1.0e-14
Identities = 32/101 (31%), Positives = 48/101 (47%)
Query: 95 VDELPPTECEVVQGSLPSCLDGAYIRNGPNPQYLPRGPY-HLFDGDGMLHSIKISRGRAT 153
V+E P V+G +P L+G +R GP + Y H FDG +LH KI +G
Sbjct: 61 VEETPKIISAQVRGHVPKWLNGYLLRIGPGKFEFGKDKYNHWFDGMALLHQFKIEKGTVM 120
Query: 154 LCSRYVR--TYKYT------IENEAGSPILP----NVFSGF 182
S++++ TYK + +E G+ LP N+F F
Sbjct: 121 YRSKFLQSDTYKANSVHDRIVVSEFGTLALPDPCKNIFERF 161
Score = 90 (36.7 bits), Expect = 1.0e-14, Sum P(3) = 1.0e-14
Identities = 45/174 (25%), Positives = 74/174 (42%)
Query: 214 DIETIGRH---DFDGKLAMS-MTAHPKLDSD-----TGEAFA-----FRYGPVPPFLTYF 259
DIET+ + D+ +A++ TAHP D D G +F + VPP
Sbjct: 198 DIETLEKKEKVDWSKFIAVNGATAHPHYDPDGTAYNMGNSFGSHGSCYHVIRVPPEKADL 257
Query: 260 RFDANGKKQPNVPIFSMTR--PSFLHDFAITKKYAVFVDIQIGMNPMEMI--------FG 309
+G Q I S R PS+ H F +T+ Y +F++ + MN ++I F
Sbjct: 258 EETIHGA-QVICSIASAERMKPSYYHSFGMTRNYIIFIEQPVKMNLWKIITSKIRGKAFS 316
Query: 310 GGSPVGADPAKVCRIGIIPRYATDESQMRWFEVPGFNIIHAINAWDEEDGNAVV 363
G + +P R ++ ++ ++ P F H INA+ E+ G V+
Sbjct: 317 DG--ISWEPQYNTRFHVVDKHTGQLLPGMYYSKP-FVTFHQINAF-EDQGCVVI 366
>UNIPROTKB|Q28175 [details] [associations]
symbol:RPE65 "Retinoid isomerohydrolase" species:9913 "Bos
taurus" [GO:0031090 "organelle membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0071257 "cellular response to
electrical stimulus" evidence=IEA] [GO:0060042 "retina
morphogenesis in camera-type eye" evidence=IEA] [GO:0042574
"retinal metabolic process" evidence=IEA] [GO:0008286 "insulin
receptor signaling pathway" evidence=IEA] [GO:0007601 "visual
perception" evidence=IEA] [GO:0007468 "regulation of rhodopsin gene
expression" evidence=IEA] [GO:0004744 "retinal isomerase activity"
evidence=IEA] [GO:0052885 "all-trans-retinyl-ester hydrolase,
11-cis retinol forming activity" evidence=IEA] [GO:0052884
"all-trans-retinyl-palmitate hydrolase, 11-cis retinol forming
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
GO:GO:0005783 GO:GO:0005886 GO:GO:0046872 GO:GO:0007601
GO:GO:0050896 GO:GO:0016853 eggNOG:COG3670
GeneTree:ENSGT00500000044783 HOGENOM:HOG000232156
HOVERGEN:HBG050679 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 GO:GO:0031090 OrthoDB:EOG47M1XK GO:GO:0052885
GO:GO:0052884 EMBL:L11356 EMBL:X66277 IPI:IPI00711777 PIR:A47143
RefSeq:NP_776878.1 UniGene:Bt.108 PDB:3FSN PDB:3KVC PDB:4F2Z
PDB:4F30 PDB:4F3A PDB:4F3D PDBsum:3FSN PDBsum:3KVC PDBsum:4F2Z
PDBsum:4F30 PDBsum:4F3A PDBsum:4F3D ProteinModelPortal:Q28175
DIP:DIP-48993N STRING:Q28175 PRIDE:Q28175
Ensembl:ENSBTAT00000043702 GeneID:282043 KEGG:bta:282043 CTD:6121
InParanoid:Q28175 KO:K11158 BRENDA:5.2.1.7 EvolutionaryTrace:Q28175
NextBio:20805904 Uniprot:Q28175
Length = 533
Score = 113 (44.8 bits), Expect = 1.0e-14, Sum P(3) = 1.0e-14
Identities = 27/74 (36%), Positives = 35/74 (47%)
Query: 92 FAPVDELPPTECEVVQGSLPSCLDGAYIRNGPNPQYLPRGP-YHLFDGDGMLHSIKISRG 150
F V+EL V G +P L G+ +R GP + P YHLFDG +LH G
Sbjct: 16 FETVEELSSPLTAHVTGRIPLWLTGSLLRCGPGLFEVGSEPFYHLFDGQALLHKFDFKEG 75
Query: 151 RATLCSRYVRTYKY 164
T R++RT Y
Sbjct: 76 HVTYHRRFIRTDAY 89
Score = 102 (41.0 bits), Expect = 1.0e-14, Sum P(3) = 1.0e-14
Identities = 28/73 (38%), Positives = 38/73 (52%)
Query: 462 PGCYGGEPFFVARDPENPETEEDDGYVVSYVHDENTGESK--FLVMDAKSPRLDIVAAVK 519
P Y EP FV+ P+ EEDDG V+S V G+ L+++AK L VA +
Sbjct: 463 PDSYPSEPIFVSH-PD--ALEEDDGVVLSVVVSPGAGQKPAYLLILNAKD--LSEVARAE 517
Query: 520 LPRRVPYGFHGLF 532
+ +P FHGLF
Sbjct: 518 VEINIPVTFHGLF 530
Score = 95 (38.5 bits), Expect = 1.0e-14, Sum P(3) = 1.0e-14
Identities = 41/176 (23%), Positives = 80/176 (45%)
Query: 205 YAIRLTPNGDIETIGRHDFDGKLAMS-MTAHPKLDSDT---------GEAFAFRYG--PV 252
+ ++ P +ETI + D ++++ TAHP +++D G+ F+ Y +
Sbjct: 151 FITKVNPE-TLETIKQVDLCNYVSVNGATAHPHIENDGTVYNIGNCFGKNFSIAYNIVKI 209
Query: 253 PPFLTYFRFDANGKKQPNV--PIFSMTRPSFLHDFAITKKYAVFVDIQIGMNPMEMIFGG 310
PP L + D K + V P +PS++H F +T Y VFV+ + +N + +
Sbjct: 210 PP-LQADKEDPISKSEIVVQFPCSDRFKPSYVHSFGLTPNYIVFVETPVKINLFKFL-SS 267
Query: 311 GSPVGADPAKVCR----IGIIPRYATDESQMRW----FEVPGFNIIHAINAWDEED 358
S GA+ +G+ A D+ + ++ + FN+ H IN +++ +
Sbjct: 268 WSLWGANYMDCFESNETMGVWLHIA-DKKRKKYINNKYRTSPFNLFHHINTYEDHE 322
>ZFIN|ZDB-GENE-010508-1 [details] [associations]
symbol:bcmo1a "beta-carotene 15,15'-monooxygenase 1a"
species:7955 "Danio rerio" [GO:0008198 "ferrous iron binding"
evidence=NAS] [GO:0003834 "beta-carotene 15,15'-monooxygenase
activity" evidence=IDA] [GO:0030902 "hindbrain development"
evidence=IMP] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0004497 "monooxygenase
activity" evidence=IEA] [GO:0001754 "eye photoreceptor cell
differentiation" evidence=IMP] ZFIN:ZDB-GENE-010508-1 GO:GO:0008198
GO:GO:0030902 HOVERGEN:HBG050679 GO:GO:0003834 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 BRENDA:1.14.99.36 GO:GO:0001754
EMBL:AJ290390 IPI:IPI00483690 UniGene:Dr.12383 STRING:Q90WH4
ArrayExpress:Q90WH4 Uniprot:Q90WH4
Length = 516
Score = 124 (48.7 bits), Expect = 3.6e-14, Sum P(3) = 3.6e-14
Identities = 31/77 (40%), Positives = 42/77 (54%)
Query: 96 DELP-PTECEVVQGSLPSCLDGAYIRNGPNPQYLPRGPY-HLFDGDGMLHSIKISRGRAT 153
+E P P + EV +GS+P + G IRNGP + Y H FDG +LHS I++G T
Sbjct: 10 EEHPEPIKTEV-KGSIPEWVQGTLIRNGPGMFSVGETTYNHWFDGMALLHSFAINKGEVT 68
Query: 154 LCSRYVRTYKYTIENEA 170
SRY+R Y +A
Sbjct: 69 YRSRYLRGDTYNSNMQA 85
Score = 99 (39.9 bits), Expect = 3.6e-14, Sum P(3) = 3.6e-14
Identities = 36/122 (29%), Positives = 56/122 (45%)
Query: 413 INPAYMAKKSRYVYAAVGDPMPKISGVVKLDVSKGDERRDCIVATRIFGPGCYGGEPFFV 472
IN + KK RY Y D P + +VK D D ++ + + G + EP F+
Sbjct: 403 INYNFNGKKYRYSYMCCVDESPVATRIVKFDA---DTKQQ--IEWK--GDDGFASEPVFI 455
Query: 473 ARDPENPETEEDDGYVVSYVHDENTGESKFL-VMDAKSPRLDIVAAVKLPRRVPYGFHGL 531
P +EDDG V++ + + + FL V+DAKS + +I A L + HG
Sbjct: 456 ---PRPGAVDEDDGVVLTVIINNKPLQGGFLLVLDAKSFK-EIARAC-LDVEIHMDMHGY 510
Query: 532 FV 533
F+
Sbjct: 511 FI 512
Score = 80 (33.2 bits), Expect = 3.6e-14, Sum P(3) = 3.6e-14
Identities = 23/98 (23%), Positives = 45/98 (45%)
Query: 271 VPIFSMTRPSFLHDFAITKKYAVFVDIQIGMNPMEMI------FGGGSPVGADPAKVCRI 324
+P S+ PS+ H F +T Y +F++ + ++ ++M S + P I
Sbjct: 222 LPCRSLLTPSYYHSFGMTDNYFIFIEQPLKLDILKMATAYLRRVSWASCMKFHPEDSTLI 281
Query: 325 GIIPRYATDESQMRWFEVPGFNIIHAINAWDEEDGNAV 362
+I R E +++ + H +NA+ E+DG+ V
Sbjct: 282 HLIDRNTKKEVATKFY-TDAMTVYHQVNAF-EDDGHVV 317
>UNIPROTKB|Q9I993 [details] [associations]
symbol:BCMO1 "Beta,beta-carotene 15,15'-monooxygenase"
species:9031 "Gallus gallus" [GO:0004497 "monooxygenase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0042572 "retinol metabolic process" evidence=IEA] [GO:0003834
"beta-carotene 15,15'-monooxygenase activity" evidence=IDA]
[GO:0001523 "retinoid metabolic process" evidence=IDA]
UniPathway:UPA00912 GO:GO:0046872 GO:GO:0004497 GO:GO:0042572
GO:GO:0001523 EMBL:AJ271386 IPI:IPI00595044 RefSeq:NP_989966.1
UniGene:Gga.41 STRING:Q9I993 Ensembl:ENSGALT00000008685
GeneID:395346 KEGG:gga:395346 CTD:53630 eggNOG:COG3670
GeneTree:ENSGT00500000044783 HOGENOM:HOG000232156
HOVERGEN:HBG050679 InParanoid:Q9I993 KO:K00515 OMA:ITENYIV
OrthoDB:EOG4G7BZ5 BioCyc:MetaCyc:MONOMER-17624 NextBio:20815431
GO:GO:0003834 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
Uniprot:Q9I993
Length = 526
Score = 119 (46.9 bits), Expect = 2.2e-13, Sum P(3) = 2.2e-13
Identities = 30/77 (38%), Positives = 39/77 (50%)
Query: 96 DELP-PTECEVVQGSLPSCLDGAYIRNGPNPQYLPRGPY-HLFDGDGMLHSIKISRGRAT 153
+E P P + EV QG LP+ L G +RNGP + Y H FDG +LHS G
Sbjct: 10 EEHPEPIKAEV-QGQLPTWLQGVLLRNGPGMHTIGDTKYNHWFDGLALLHSFTFKNGEVY 68
Query: 154 LCSRYVRTYKYTIENEA 170
S+Y+R+ Y EA
Sbjct: 69 YRSKYLRSDTYNCNIEA 85
Score = 103 (41.3 bits), Expect = 2.2e-13, Sum P(3) = 2.2e-13
Identities = 42/163 (25%), Positives = 75/163 (46%)
Query: 379 TDLVHALVEKVRIDLRTGIVTRRP-MSARNLDFGVINPAYMAKKSRYVYAAVGDPMPKIS 437
++LV + + G + +P + ++ +N Y KK +YVYA P +
Sbjct: 372 SNLVKLPTSATAVKEKDGSIYCQPEILCEGIELPRVNYDYNGKKYKYVYATEVQWSPVPT 431
Query: 438 GVVKLDVSKGDERRDCIVATRIFGPG-CYGGEPFFVARDPENPETEEDDGYVVSYVHDEN 496
+ KL+V + ++ + +G C+ EP FV P EED+G V++ V
Sbjct: 432 KIAKLNV----QTKEVLH----WGEDHCWPSEPIFV---PSPDAREEDEGVVLTCVVVSE 480
Query: 497 TGESKFL-VMDAKSPRLDIVAAVKLPRRVPYGFHGLFVRQADL 538
++ FL ++DAK+ + A V + + HG+F+ Q DL
Sbjct: 481 PNKAPFLLILDAKTFKELGRATVNVEMHLD--LHGMFIPQNDL 521
Score = 74 (31.1 bits), Expect = 2.2e-13, Sum P(3) = 2.2e-13
Identities = 25/99 (25%), Positives = 46/99 (46%)
Query: 270 NVPIFSMTRPSFLHDFAITKKYAVFVDIQIGMNPMEM----IFG--GGSPVGADPAKVCR 323
++P S+ +PS+ H F IT+ Y VF++ ++ +++ I G S +
Sbjct: 223 SIPSRSLLQPSYYHSFGITENYIVFIEQPFKLDIVKLATAYIRGVNWASCLSFHKEDKTW 282
Query: 324 IGIIPRYATDESQMRWFEVPGFNIIHAINAWDEEDGNAV 362
+ R E +++ + H INA+ EEDG+ V
Sbjct: 283 FHFVDRKTKKEVSTKFY-TDALVLYHHINAY-EEDGHVV 319
>MGI|MGI:1926923 [details] [associations]
symbol:Bcmo1 "beta-carotene 15,15'-monooxygenase"
species:10090 "Mus musculus" [GO:0001523 "retinoid metabolic
process" evidence=ISO;IDA] [GO:0003834 "beta-carotene
15,15'-monooxygenase activity" evidence=ISO;ISS;IDA] [GO:0004497
"monooxygenase activity" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=ISO;ISS;IDA] UniPathway:UPA00912 MGI:MGI:1926923
GO:GO:0046872 GO:GO:0004497 GO:GO:0042572 GO:GO:0001523 CTD:53630
eggNOG:COG3670 GeneTree:ENSGT00500000044783 HOGENOM:HOG000232156
HOVERGEN:HBG050679 KO:K00515 OMA:ITENYIV OrthoDB:EOG4G7BZ5
GO:GO:0003834 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
EMBL:AJ278064 EMBL:AF271298 EMBL:AF294899 EMBL:AY114302
EMBL:AY114294 EMBL:AY114295 EMBL:AY114296 EMBL:AY114297
EMBL:AY114298 EMBL:AY114299 EMBL:AY114300 EMBL:AY114301
EMBL:AK054171 IPI:IPI00122199 RefSeq:NP_067461.2 UniGene:Mm.174133
ProteinModelPortal:Q9JJS6 SMR:Q9JJS6 STRING:Q9JJS6
PhosphoSite:Q9JJS6 PRIDE:Q9JJS6 Ensembl:ENSMUST00000034308
GeneID:63857 KEGG:mmu:63857 InParanoid:Q9JJS6 BRENDA:1.14.99.36
NextBio:319783 Bgee:Q9JJS6 CleanEx:MM_BCMO1 Genevestigator:Q9JJS6
GermOnline:ENSMUSG00000031845 Uniprot:Q9JJS6
Length = 566
Score = 119 (46.9 bits), Expect = 2.4e-13, Sum P(3) = 2.4e-13
Identities = 27/76 (35%), Positives = 40/76 (52%)
Query: 96 DELPPTECEVVQGSLPSCLDGAYIRNGPNPQYLPRGPY-HLFDGDGMLHSIKISRGRATL 154
++L P + +V GS+P+ L G +RNGP + Y H FDG +LHS I G
Sbjct: 11 EQLEPVQAKVT-GSIPAWLQGTLLRNGPGMHTVGESKYNHWFDGLALLHSFSIRDGEVFY 69
Query: 155 CSRYVRTYKYTIENEA 170
S+Y+++ Y EA
Sbjct: 70 RSKYLQSDTYIANIEA 85
Score = 107 (42.7 bits), Expect = 2.4e-13, Sum P(3) = 2.4e-13
Identities = 37/131 (28%), Positives = 59/131 (45%)
Query: 408 LDFGVINPAYMAKKSRYVYAAVGDPMPKISGVVKLDVSKGDERRDCIVATRIFGPGCYGG 467
L+ IN AY K RY++AA P + ++K D+ + + C+
Sbjct: 404 LELPRINYAYNGKPYRYIFAAEVQWSPVPTKILKYDILTKS-------SLKWSEESCWPA 456
Query: 468 EPFFVARDPENPETEEDDGYVVSYVHDENTGESKFL-VMDAKSPRLDIVAAVKLPRRVPY 526
EP FV P +EDDG ++S + + + FL ++DAKS +A + +
Sbjct: 457 EPLFV---PTPGAKDEDDGVILSAIVSTDPQKLPFLLILDAKS--FTELARASVDADMHL 511
Query: 527 GFHGLFVRQAD 537
HGLF+ AD
Sbjct: 512 DLHGLFIPDAD 522
Score = 71 (30.1 bits), Expect = 2.4e-13, Sum P(3) = 2.4e-13
Identities = 24/91 (26%), Positives = 42/91 (46%)
Query: 275 SMTRPSFLHDFAITKKYAVFVDIQIGMNPMEMIFG---G---GSPVGADPAKVCRIGIIP 328
S+ PS+ H F +T+ Y VF++ ++ ++M G S + D I II
Sbjct: 229 SLLSPSYYHSFGVTENYVVFLEQPFKLDILKMATAYMRGVSWASCMSFDREDKTYIHIID 288
Query: 329 RYATDESQMRWFEVPGFNIIHAINAWDEEDG 359
+ +++ P + H +NA+ EEDG
Sbjct: 289 QRTRKPVPTKFYTDP-MVVFHHVNAY-EEDG 317
>UNIPROTKB|Q746V1 [details] [associations]
symbol:GSU3417 "Dioxygenase, putative" species:243231
"Geobacter sulfurreducens PCA" [GO:0008150 "biological_process"
evidence=ND] [GO:0016491 "oxidoreductase activity" evidence=ISS]
[GO:0055114 "oxidation-reduction process" evidence=ISS]
GO:GO:0016491 InterPro:IPR006311 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0016702 PROSITE:PS51318
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
HOGENOM:HOG000254835 InterPro:IPR019546 TIGRFAMs:TIGR01409
RefSeq:NP_954457.1 ProteinModelPortal:Q746V1 GeneID:2686608
KEGG:gsu:GSU3417 PATRIC:22029691 KO:K00464 OMA:INIAERS
ProtClustDB:CLSK743204 BioCyc:GSUL243231:GH27-3391-MONOMER
Uniprot:Q746V1
Length = 509
Score = 150 (57.9 bits), Expect = 4.1e-13, Sum P(2) = 4.1e-13
Identities = 84/348 (24%), Positives = 140/348 (40%)
Query: 204 PYAIRLTPNGDIETIGRHDFD-GKLAMSMTAHPKLDSDTGE--AFAFRYGPVPPFLTYFR 260
PY L P+ + T+G F + + +AH K D TGE F RYGP F+
Sbjct: 175 PY--ELDPD-TLATVGETTFGLPRDLTTYSAHGKFDPVTGEWLHFGIRYGP-RTFVHLTT 230
Query: 261 FDANGKKQPNVPIFSMTRPSFLHDFAITKKYAVFV--DIQIGMNPMEM-IFGGGSPVGAD 317
F+A+G + + + + R ++HD+ +T+++ VF ++I P + I +
Sbjct: 231 FNADGTLRRHRAL-ELPRAIYMHDWFVTERHVVFHLHPVEIAYWPFLLGIRSMAESLRWR 289
Query: 318 PAKVCRIGIIPRYATDESQMRWFEVPGFNIIHAINAWDEEDGNAVVMVAPNILSVEHTLD 377
P + + + R E+ R E + H NAW+E V + +H +
Sbjct: 290 PERGTILMVAER--DGEAPPRLVETEACYLWHTFNAWEERGKITADFVGYR--NPDHFIS 345
Query: 378 RTDLVHAL-------------VEKVRIDLRTGIVTRRPMSARNLDFGVINPAYMAKKSRY 424
++ A+ V + RID G R + + ++ I+ + R
Sbjct: 346 DDPVITAVMLGRRGTYSYPGEVMRYRIDPARGTAAREVLHQGSCEWPRIDERLRCRPHRT 405
Query: 425 VYAAVGDPMPKISGVVK-LDVSKGDERRDCIVATRIFGPGCYGGEPFFVARDPENPET-E 482
Y P +V LD G R D FG G Y EP F R P+T
Sbjct: 406 GYMLRCLPGEFFWSIVMGLDPVTG--RTD----EYSFGRGVYCTEPVFAPR----PDTLA 455
Query: 483 EDDGYVVSYVHDENTGESKFLVMDAKSPRLDIVAAVKLPRRVPYGFHG 530
G+++ ++D T S ++DA +A V+L VP+ +HG
Sbjct: 456 GGPGWLLVELYDSRTRTSSLAILDADRIADGPLALVRLTHHVPFSYHG 503
Score = 100 (40.3 bits), Expect = 4.1e-13, Sum P(2) = 4.1e-13
Identities = 26/74 (35%), Positives = 37/74 (50%)
Query: 106 VQGSLPSCLDGAYIRNGPNPQYLPRGPYH---LFDGDGMLHSIKISRGRATLCSRYVRTY 162
V+G++P+ L G RNGP RG L DGDGM+ + + +R+VRT
Sbjct: 60 VEGTIPAGLRGTLYRNGP--ALFDRGGMRKRTLLDGDGMVQAFRFGDRGIRYANRFVRTR 117
Query: 163 KYTIENEAGSPILP 176
K+ E AG + P
Sbjct: 118 KFVEEEAAGRFLHP 131
>TIGR_CMR|GSU_3417 [details] [associations]
symbol:GSU_3417 "dioxygenase, putative" species:243231
"Geobacter sulfurreducens PCA" [GO:0008150 "biological_process"
evidence=ND] [GO:0016491 "oxidoreductase activity" evidence=ISS]
GO:GO:0016491 InterPro:IPR006311 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0016702 PROSITE:PS51318
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
HOGENOM:HOG000254835 InterPro:IPR019546 TIGRFAMs:TIGR01409
RefSeq:NP_954457.1 ProteinModelPortal:Q746V1 GeneID:2686608
KEGG:gsu:GSU3417 PATRIC:22029691 KO:K00464 OMA:INIAERS
ProtClustDB:CLSK743204 BioCyc:GSUL243231:GH27-3391-MONOMER
Uniprot:Q746V1
Length = 509
Score = 150 (57.9 bits), Expect = 4.1e-13, Sum P(2) = 4.1e-13
Identities = 84/348 (24%), Positives = 140/348 (40%)
Query: 204 PYAIRLTPNGDIETIGRHDFD-GKLAMSMTAHPKLDSDTGE--AFAFRYGPVPPFLTYFR 260
PY L P+ + T+G F + + +AH K D TGE F RYGP F+
Sbjct: 175 PY--ELDPD-TLATVGETTFGLPRDLTTYSAHGKFDPVTGEWLHFGIRYGP-RTFVHLTT 230
Query: 261 FDANGKKQPNVPIFSMTRPSFLHDFAITKKYAVFV--DIQIGMNPMEM-IFGGGSPVGAD 317
F+A+G + + + + R ++HD+ +T+++ VF ++I P + I +
Sbjct: 231 FNADGTLRRHRAL-ELPRAIYMHDWFVTERHVVFHLHPVEIAYWPFLLGIRSMAESLRWR 289
Query: 318 PAKVCRIGIIPRYATDESQMRWFEVPGFNIIHAINAWDEEDGNAVVMVAPNILSVEHTLD 377
P + + + R E+ R E + H NAW+E V + +H +
Sbjct: 290 PERGTILMVAER--DGEAPPRLVETEACYLWHTFNAWEERGKITADFVGYR--NPDHFIS 345
Query: 378 RTDLVHAL-------------VEKVRIDLRTGIVTRRPMSARNLDFGVINPAYMAKKSRY 424
++ A+ V + RID G R + + ++ I+ + R
Sbjct: 346 DDPVITAVMLGRRGTYSYPGEVMRYRIDPARGTAAREVLHQGSCEWPRIDERLRCRPHRT 405
Query: 425 VYAAVGDPMPKISGVVK-LDVSKGDERRDCIVATRIFGPGCYGGEPFFVARDPENPET-E 482
Y P +V LD G R D FG G Y EP F R P+T
Sbjct: 406 GYMLRCLPGEFFWSIVMGLDPVTG--RTD----EYSFGRGVYCTEPVFAPR----PDTLA 455
Query: 483 EDDGYVVSYVHDENTGESKFLVMDAKSPRLDIVAAVKLPRRVPYGFHG 530
G+++ ++D T S ++DA +A V+L VP+ +HG
Sbjct: 456 GGPGWLLVELYDSRTRTSSLAILDADRIADGPLALVRLTHHVPFSYHG 503
Score = 100 (40.3 bits), Expect = 4.1e-13, Sum P(2) = 4.1e-13
Identities = 26/74 (35%), Positives = 37/74 (50%)
Query: 106 VQGSLPSCLDGAYIRNGPNPQYLPRGPYH---LFDGDGMLHSIKISRGRATLCSRYVRTY 162
V+G++P+ L G RNGP RG L DGDGM+ + + +R+VRT
Sbjct: 60 VEGTIPAGLRGTLYRNGP--ALFDRGGMRKRTLLDGDGMVQAFRFGDRGIRYANRFVRTR 117
Query: 163 KYTIENEAGSPILP 176
K+ E AG + P
Sbjct: 118 KFVEEEAAGRFLHP 131
>UNIPROTKB|Q9HAY6 [details] [associations]
symbol:BCMO1 "Beta,beta-carotene 15,15'-monooxygenase"
species:9606 "Homo sapiens" [GO:0004497 "monooxygenase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0042572 "retinol metabolic process" evidence=IEA] [GO:0001523
"retinoid metabolic process" evidence=IDA;TAS] [GO:0003834
"beta-carotene 15,15'-monooxygenase activity" evidence=IDA;TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0008202 "steroid metabolic
process" evidence=TAS] [GO:0044281 "small molecule metabolic
process" evidence=TAS] [GO:0035238 "vitamin A biosynthetic process"
evidence=NAS] [GO:0042574 "retinal metabolic process" evidence=NAS]
Reactome:REACT_111217 UniPathway:UPA00912 GO:GO:0005829
GO:GO:0008202 GO:GO:0046872 GO:GO:0004497 EMBL:CH471114
GO:GO:0042572 GO:GO:0042574 CTD:53630 eggNOG:COG3670
HOGENOM:HOG000232156 HOVERGEN:HBG050679 KO:K00515 OMA:ITENYIV
OrthoDB:EOG4G7BZ5 GO:GO:0003834 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 EMBL:AF294900 EMBL:AK001592
EMBL:BC126210 EMBL:BC126212 IPI:IPI00307216 RefSeq:NP_059125.2
UniGene:Hs.212172 ProteinModelPortal:Q9HAY6 SMR:Q9HAY6
IntAct:Q9HAY6 STRING:Q9HAY6 PhosphoSite:Q9HAY6 DMDM:41688803
PRIDE:Q9HAY6 DNASU:53630 Ensembl:ENST00000258168 GeneID:53630
KEGG:hsa:53630 UCSC:uc002fgn.1 GeneCards:GC16P081272
HGNC:HGNC:13815 HPA:HPA043811 MIM:115300 MIM:605748
neXtProt:NX_Q9HAY6 Orphanet:199285 PharmGKB:PA37812
InParanoid:Q9HAY6 PhylomeDB:Q9HAY6 BioCyc:MetaCyc:HS06050-MONOMER
ChiTaRS:BCMO1 GenomeRNAi:53630 NextBio:56108 ArrayExpress:Q9HAY6
Bgee:Q9HAY6 CleanEx:HS_BCMO1 Genevestigator:Q9HAY6
GermOnline:ENSG00000135697 GO:GO:0035238 Uniprot:Q9HAY6
Length = 547
Score = 116 (45.9 bits), Expect = 1.8e-12, Sum P(3) = 1.8e-12
Identities = 27/76 (35%), Positives = 38/76 (50%)
Query: 96 DELPPTECEVVQGSLPSCLDGAYIRNGPNPQYLPRGPY-HLFDGDGMLHSIKISRGRATL 154
++L P +V G +P+ L G +RNGP + Y H FDG +LHS I G
Sbjct: 11 EQLEPVRAKVT-GKIPAWLQGTLLRNGPGMHTVGESRYNHWFDGLALLHSFTIRDGEVYY 69
Query: 155 CSRYVRTYKYTIENEA 170
S+Y+R+ Y EA
Sbjct: 70 RSKYLRSDTYNTNIEA 85
Score = 97 (39.2 bits), Expect = 1.8e-12, Sum P(3) = 1.8e-12
Identities = 37/135 (27%), Positives = 62/135 (45%)
Query: 408 LDFGVINPAYMAKKSRYVYAAVGDPMPKISGVVKLDV-SKGDER-RDCIVATRIFGPGCY 465
L+ +N A+ K+ RYV+A P + ++K D+ +K + R+ C+
Sbjct: 404 LELPRVNYAHNGKQYRYVFATGVQWSPIPTKIIKYDILTKSSLKWRE---------DDCW 454
Query: 466 GGEPFFVARDPENPETEEDDGYVVSYVHDENTGESKFL-VMDAKSPRLDIVAAVKLPRRV 524
EP FV P +EDDG ++S + + + FL ++DAKS +A + +
Sbjct: 455 PAEPLFV---PAPGAKDEDDGVILSAIVSTDPQKLPFLLILDAKS--FTELARASVDVDM 509
Query: 525 PYGFHGLFVRQADLD 539
HGLF+ D D
Sbjct: 510 HMDLHGLFITDMDWD 524
Score = 75 (31.5 bits), Expect = 1.8e-12, Sum P(3) = 1.8e-12
Identities = 22/96 (22%), Positives = 44/96 (45%)
Query: 270 NVPIFSMTRPSFLHDFAITKKYAVFVDIQIGMNPMEMI------FGGGSPVGADPAKVCR 323
++P S+ PS+ H F +T+ Y +F++ ++ ++M S + +
Sbjct: 224 SIPSRSLLSPSYYHSFGVTENYVIFLEQPFRLDILKMATAYIRRMSWASCLAFHREEKTY 283
Query: 324 IGIIPRYATDESQMRWFEVPGFNIIHAINAWDEEDG 359
I II + Q +++ + H +NA+ EEDG
Sbjct: 284 IHIIDQRTRQPVQTKFY-TDAMVVFHHVNAY-EEDG 317
>ZFIN|ZDB-GENE-081104-505 [details] [associations]
symbol:rpe65c "retinal pigment epithelium-specific
protein 65c" species:7955 "Danio rerio" [GO:0008152 "metabolic
process" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0050251 "retinol isomerase
activity" evidence=IDA] ZFIN:ZDB-GENE-081104-505
GeneTree:ENSGT00500000044783 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 EMBL:CR759968 Ensembl:ENSDART00000038725
Uniprot:K9J6Q0
Length = 532
Score = 117 (46.2 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 27/74 (36%), Positives = 37/74 (50%)
Query: 92 FAPVDELPPTECEVVQGSLPSCLDGAYIRNGPNPQYLPRGP-YHLFDGDGMLHSIKISRG 150
F +EL V G +P+ L G+ +R GP + P YHLFDG +LH + G
Sbjct: 16 FESCEELAEPIPAHVSGEIPAWLSGSLLRMGPGLFEVGDEPFYHLFDGQALLHKFDLKDG 75
Query: 151 RATLCSRYVRTYKY 164
R T R++RT Y
Sbjct: 76 RVTYHRRFIRTDAY 89
Score = 90 (36.7 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 45/180 (25%), Positives = 80/180 (44%)
Query: 205 YAIRLTPNGDIETIGRHDFDGKLAMS-MTAHPKLDSD-----TGEAF------AFRYGPV 252
+ ++ P+ +ET+ + D L+++ +TAHP +++D G F A+ +
Sbjct: 151 FITKVDPD-TLETVKKVDLCNYLSVNGLTAHPHIEADGTVYNIGNCFGKNMSLAYNIVKI 209
Query: 253 PPFLTYFRFDANGKKQPNVPIFSMTR--PSFLHDFAITKKYAVFVDIQIGMNPMEMIFG- 309
PP L + D K + V S R PS++H F IT+ + VFV+ + +N ++ +
Sbjct: 210 PP-LQEDKSDQFEKSKILVQFPSSERFKPSYVHSFGITENHFVFVETPVKINLLKFLTSW 268
Query: 310 ---GGSPVGADPAKVCRIGIIPRYATDESQM---RWFEVPGFNIIHAINAWDEEDGNAVV 363
G + + + ++G A F FNI H IN + E+ G VV
Sbjct: 269 SIRGSNYMDCFESND-KMGTWFHLAAKNPGKYIDHKFRTSAFNIFHHINCF-EDQGFIVV 326
Score = 80 (33.2 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 20/72 (27%), Positives = 35/72 (48%)
Query: 462 PGCYGGEPFFVARDPENPETE-EDDGYVVSYVHDENTGESKFLVMDAKSPRLDIVAAVKL 520
P Y EP FV ++P+ E EDDG ++S V + ++ K+ L +A ++
Sbjct: 463 PDAYPSEPLFV----QSPDAEDEDDGVLLSIVVKPGVSQRPAFLLILKATDLTEIARAEV 518
Query: 521 PRRVPYGFHGLF 532
+P HG++
Sbjct: 519 DVLIPLTLHGIY 530
>RGD|70981 [details] [associations]
symbol:Bcmo1 "beta-carotene 15,15'-monooxygenase 1" species:10116
"Rattus norvegicus" [GO:0001523 "retinoid metabolic process"
evidence=IEA;ISO;IDA] [GO:0003834 "beta-carotene
15,15'-monooxygenase activity" evidence=IEA;ISO;IDA] [GO:0004497
"monooxygenase activity" evidence=IEA] [GO:0042572 "retinol
metabolic process" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=ISO] UniPathway:UPA00912 RGD:70981 GO:GO:0046872
GO:GO:0004497 GO:GO:0042572 GO:GO:0001523 CTD:53630 eggNOG:COG3670
HOGENOM:HOG000232156 HOVERGEN:HBG050679 KO:K00515 OrthoDB:EOG4G7BZ5
GO:GO:0003834 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
EMBL:AB062912 IPI:IPI00208162 RefSeq:NP_446100.1 UniGene:Rn.126587
STRING:Q91XT5 PRIDE:Q91XT5 GeneID:114106 KEGG:rno:114106
UCSC:RGD:70981 InParanoid:Q91XT5 NextBio:618281
Genevestigator:Q91XT5 GermOnline:ENSRNOG00000012027 Uniprot:Q91XT5
Length = 566
Score = 113 (44.8 bits), Expect = 3.5e-12, Sum P(3) = 3.5e-12
Identities = 27/76 (35%), Positives = 38/76 (50%)
Query: 96 DELPPTECEVVQGSLPSCLDGAYIRNGPNPQYLPRGPY-HLFDGDGMLHSIKISRGRATL 154
++L P V GS+P+ L G +RNGP + Y H FDG +LHS I G
Sbjct: 11 EQLEPLRATVT-GSIPAWLQGTLLRNGPGMHTVGDSKYNHWFDGLALLHSFSIRDGEVFY 69
Query: 155 CSRYVRTYKYTIENEA 170
S+Y+++ Y EA
Sbjct: 70 RSKYLQSDTYNANIEA 85
Score = 95 (38.5 bits), Expect = 3.5e-12, Sum P(3) = 3.5e-12
Identities = 36/130 (27%), Positives = 58/130 (44%)
Query: 408 LDFGVINPAYMAKKSRYVYAAVGDPMPKISGVVKLDVSKGDERRDCIVATRIFGPGCYGG 467
L+ IN A+ K RY++AA P + ++K DV + + C+
Sbjct: 404 LELPRINYAHNGKPYRYIFAAEVQWSPVPTKILKYDVLTKS-------SLKWSEESCWPA 456
Query: 468 EPFFVARDPENPETEEDDGYVVSYVHDENTGESKFL-VMDAKSPRLDIVAAVKLPRRVPY 526
EP FV P +EDDG ++S + + + FL ++DAKS +A + +
Sbjct: 457 EPLFV---PTPGAKDEDDGVILSAIISTDPQKLPFLLILDAKS--FTELARASVDVDMHL 511
Query: 527 GFHGLFVRQA 536
HGLF+ A
Sbjct: 512 DLHGLFIPDA 521
Score = 78 (32.5 bits), Expect = 3.5e-12, Sum P(3) = 3.5e-12
Identities = 25/96 (26%), Positives = 45/96 (46%)
Query: 270 NVPIFSMTRPSFLHDFAITKKYAVFVDIQIGMNPMEMIFGGGSPVG-ADPAKVCR----- 323
++P S+ PS+ H F +T+ Y VF++ ++ ++M V A C+
Sbjct: 224 SIPSRSLLSPSYYHSFGVTENYVVFLEQPFKLDILKMATAYMRGVSWASCMTFCKEDKTY 283
Query: 324 IGIIPRYATDESQMRWFEVPGFNIIHAINAWDEEDG 359
I II + +++ P + H +NA+ EEDG
Sbjct: 284 IHIIDQKTRKPVPTKFYTDP-MVVFHHVNAY-EEDG 317
>UNIPROTKB|Q91XT5 [details] [associations]
symbol:Bcmo1 "Beta,beta-carotene 15,15'-monooxygenase"
species:10116 "Rattus norvegicus" [GO:0004497 "monooxygenase
activity" evidence=IEA] UniPathway:UPA00912 RGD:70981 GO:GO:0046872
GO:GO:0004497 GO:GO:0042572 GO:GO:0001523 CTD:53630 eggNOG:COG3670
HOGENOM:HOG000232156 HOVERGEN:HBG050679 KO:K00515 OrthoDB:EOG4G7BZ5
GO:GO:0003834 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
EMBL:AB062912 IPI:IPI00208162 RefSeq:NP_446100.1 UniGene:Rn.126587
STRING:Q91XT5 PRIDE:Q91XT5 GeneID:114106 KEGG:rno:114106
UCSC:RGD:70981 InParanoid:Q91XT5 NextBio:618281
Genevestigator:Q91XT5 GermOnline:ENSRNOG00000012027 Uniprot:Q91XT5
Length = 566
Score = 113 (44.8 bits), Expect = 3.5e-12, Sum P(3) = 3.5e-12
Identities = 27/76 (35%), Positives = 38/76 (50%)
Query: 96 DELPPTECEVVQGSLPSCLDGAYIRNGPNPQYLPRGPY-HLFDGDGMLHSIKISRGRATL 154
++L P V GS+P+ L G +RNGP + Y H FDG +LHS I G
Sbjct: 11 EQLEPLRATVT-GSIPAWLQGTLLRNGPGMHTVGDSKYNHWFDGLALLHSFSIRDGEVFY 69
Query: 155 CSRYVRTYKYTIENEA 170
S+Y+++ Y EA
Sbjct: 70 RSKYLQSDTYNANIEA 85
Score = 95 (38.5 bits), Expect = 3.5e-12, Sum P(3) = 3.5e-12
Identities = 36/130 (27%), Positives = 58/130 (44%)
Query: 408 LDFGVINPAYMAKKSRYVYAAVGDPMPKISGVVKLDVSKGDERRDCIVATRIFGPGCYGG 467
L+ IN A+ K RY++AA P + ++K DV + + C+
Sbjct: 404 LELPRINYAHNGKPYRYIFAAEVQWSPVPTKILKYDVLTKS-------SLKWSEESCWPA 456
Query: 468 EPFFVARDPENPETEEDDGYVVSYVHDENTGESKFL-VMDAKSPRLDIVAAVKLPRRVPY 526
EP FV P +EDDG ++S + + + FL ++DAKS +A + +
Sbjct: 457 EPLFV---PTPGAKDEDDGVILSAIISTDPQKLPFLLILDAKS--FTELARASVDVDMHL 511
Query: 527 GFHGLFVRQA 536
HGLF+ A
Sbjct: 512 DLHGLFIPDA 521
Score = 78 (32.5 bits), Expect = 3.5e-12, Sum P(3) = 3.5e-12
Identities = 25/96 (26%), Positives = 45/96 (46%)
Query: 270 NVPIFSMTRPSFLHDFAITKKYAVFVDIQIGMNPMEMIFGGGSPVG-ADPAKVCR----- 323
++P S+ PS+ H F +T+ Y VF++ ++ ++M V A C+
Sbjct: 224 SIPSRSLLSPSYYHSFGVTENYVVFLEQPFKLDILKMATAYMRGVSWASCMTFCKEDKTY 283
Query: 324 IGIIPRYATDESQMRWFEVPGFNIIHAINAWDEEDG 359
I II + +++ P + H +NA+ EEDG
Sbjct: 284 IHIIDQKTRKPVPTKFYTDP-MVVFHHVNAY-EEDG 317
>ZFIN|ZDB-GENE-050410-16 [details] [associations]
symbol:rpe65b "retinal pigment epithelium-specific
protein 65b" species:7955 "Danio rerio" [GO:0008150
"biological_process" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
ZFIN:ZDB-GENE-050410-16 GO:GO:0005886 GO:GO:0005737 GO:GO:0046872
GO:GO:0016787 GeneTree:ENSGT00500000044783 HOVERGEN:HBG050679
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055 EMBL:AY646887
EMBL:CR759968 EMBL:BC133985 EMBL:BC155753 IPI:IPI00851384
RefSeq:NP_001082902.2 UniGene:Dr.79444 ProteinModelPortal:A9C3R9
PRIDE:A9C3R9 DNASU:100002865 Ensembl:ENSDART00000076542
GeneID:100002865 KEGG:dre:100002865 CTD:100002865
BioCyc:MetaCyc:MONOMER-16789 NextBio:20785619 Bgee:A9C3R9
Uniprot:A9C3R9
Length = 532
Score = 109 (43.4 bits), Expect = 6.1e-12, Sum P(3) = 6.1e-12
Identities = 24/74 (32%), Positives = 37/74 (50%)
Query: 92 FAPVDELPPTECEVVQGSLPSCLDGAYIRNGPNPQYLPRGPY-HLFDGDGMLHSIKISRG 150
F +EL V G +P+ L G+ +R GP + P+ HLFDG ++H + G
Sbjct: 16 FESCEELAEPIPAHVSGKIPAWLSGSLLRMGPGLFEIGDEPFNHLFDGQALIHKFDLKDG 75
Query: 151 RATLCSRYVRTYKY 164
R T +++RT Y
Sbjct: 76 RVTYHRKFIRTDAY 89
Score = 94 (38.1 bits), Expect = 6.1e-12, Sum P(3) = 6.1e-12
Identities = 45/180 (25%), Positives = 79/180 (43%)
Query: 205 YAIRLTPNGDIETIGRHDFDGKLAMS-MTAHPKLDSD-----TGEAF------AFRYGPV 252
+ ++ P+ +ETI + D L+++ +TAHP +++D G F A+ +
Sbjct: 151 FITKVNPD-TLETIKKVDLCNYLSVNGLTAHPHIEADGTVYNIGNCFGKNMSLAYNIVKI 209
Query: 253 PPFLTYFRFD--ANGKKQPNVPIFSMTRPSFLHDFAITKKYAVFVDIQIGMNPMEMIFG- 309
PP L + D A K P +PS++H F +T+ + VFV+ + +N ++ +
Sbjct: 210 PP-LQEEKSDPLAMSKVLVQFPSSERFKPSYVHSFGMTENHFVFVETPVKINLLKFLTSW 268
Query: 310 ---GGSPVGADPAKVCRIGIIPRYATDESQM---RWFEVPGFNIIHAINAWDEEDGNAVV 363
G + + + R+G A F FNI H IN + E+ G VV
Sbjct: 269 SIRGSNYMDCFESND-RMGTWFHLAAKNPGKYIDHKFRTSAFNIFHHINCF-EDQGFIVV 326
Score = 80 (33.2 bits), Expect = 6.1e-12, Sum P(3) = 6.1e-12
Identities = 20/72 (27%), Positives = 35/72 (48%)
Query: 462 PGCYGGEPFFVARDPENPETE-EDDGYVVSYVHDENTGESKFLVMDAKSPRLDIVAAVKL 520
P Y EP FV ++P+ E EDDG ++S V + ++ K+ L +A ++
Sbjct: 463 PDAYPSEPLFV----QSPDAEDEDDGVLLSIVVKPGVSQRPAFLLILKATDLTEIARAEV 518
Query: 521 PRRVPYGFHGLF 532
+P HG++
Sbjct: 519 DVLIPLTLHGIY 530
>WB|WBGene00012914 [details] [associations]
symbol:bcmo-1 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
GO:GO:0040010 eggNOG:COG3670 GeneTree:ENSGT00500000044783
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055 EMBL:AL110485
OMA:TSMEFPR HOGENOM:HOG000153586 RefSeq:NP_496729.2
UniGene:Cel.14051 ProteinModelPortal:Q9U2E4 SMR:Q9U2E4
DIP:DIP-26226N IntAct:Q9U2E4 MINT:MINT-1067701 PaxDb:Q9U2E4
EnsemblMetazoa:Y46G5A.24 GeneID:189959 KEGG:cel:CELE_Y46G5A.24
UCSC:Y46G5A.24 CTD:189959 WormBase:Y46G5A.24 InParanoid:Q9U2E4
NextBio:944184 Uniprot:Q9U2E4
Length = 529
Score = 118 (46.6 bits), Expect = 6.2e-12, Sum P(3) = 6.2e-12
Identities = 40/118 (33%), Positives = 62/118 (52%)
Query: 420 KKSRYVYAAV--GDPMPKISGVVKLDVSKGDERRDCIVATRIFGPGCYGGEPFFVARDPE 477
K+ RYV+ + G ++GVVK D+ G+ ++ R P GEP FV P
Sbjct: 419 KEYRYVFGSTVFGRIDGNLAGVVKADLKFGNH----LIWNRE-NPHQICGEPIFV---P- 469
Query: 478 NPE-TEEDDGYVVSYVHDENTGESKF-LVMDAKSPRLDIVAAVKLPR-RVPYGFHGLF 532
NPE EEDDG ++ + + + F L++DAK+ L+ A ++P R+P GFH +
Sbjct: 470 NPEGIEEDDGILIVPIMSSSEKQVPFVLILDAKT--LEETARFEIPEARIPLGFHAFY 525
Score = 115 (45.5 bits), Expect = 6.2e-12, Sum P(3) = 6.2e-12
Identities = 34/88 (38%), Positives = 43/88 (48%)
Query: 84 PRHVLSDNFAPVDELPPTECEVVQGSLPSCLDGAYIRNGPNPQYLPRGPY-HLFDGDGML 142
PR L NF V E P EC+ V GS+PS L G +RNGP + Y H FDG G +
Sbjct: 7 PR--LFHNFENVPE--PKECKKV-GSVPSYLTGTMLRNGPGMFTVGEEEYKHWFDGLGFM 61
Query: 143 HSIKISRGRATLCSRYVRTYKYTIENEA 170
G+ +RY+ + YT EA
Sbjct: 62 QRYHFEDGKMFYSARYLESEAYTKTVEA 89
Score = 53 (23.7 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 18/55 (32%), Positives = 26/55 (47%)
Query: 448 DERRDCI-VATRIFGPGCYGGEPFFVARDPENPETEEDDGYVVSYVHDENTGESK 501
DE D + +R FGP F V ++P+N ++E D S+ H GE K
Sbjct: 179 DENGDVYNIGSR-FGPE--SAHVFTVTKNPKNQKSENDH----SWEHTSKIGEIK 226
Score = 49 (22.3 bits), Expect = 6.2e-12, Sum P(3) = 6.2e-12
Identities = 23/116 (19%), Positives = 50/116 (43%)
Query: 202 DLPYAIRLTPNGDIETIGRHDFDGKLAM-SMTAHPKLDSDTGEAFAF--RYGPVPPFLTY 258
+ P+ R+ + ++T+ DF +A+ S TAH D + G+ + R+GP +
Sbjct: 143 ETPHMYRVDLD-TLKTLEAADFSKFVAVHSCTAHQLYD-ENGDVYNIGSRFGPESAHVFT 200
Query: 259 FRFDANGKKQPNVPIFSMTR------------PSFLHDFAITKKYAVFVDIQIGMN 302
+ +K N + T P+++H F +++ Y V + + ++
Sbjct: 201 VTKNPKNQKSENDHSWEHTSKIGEIKASDPLYPTYMHSFGMSENYLVMFESPVRLH 256
Score = 40 (19.1 bits), Expect = 0.00042, Sum P(3) = 0.00042
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 469 PFFVARDPENPETEEDDG-YVVSYVHDENTGE-SKFLVMDAKS 509
PFF + T E DG V+ Y EN G+ L+ + K+
Sbjct: 303 PFFTFH---HANTFEKDGCLVMDYCRIENAGKFDTLLISNMKT 342
>ASPGD|ASPL0000049803 [details] [associations]
symbol:AN1704 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] EMBL:BN001307 GO:GO:0016702 EMBL:AACD01000026
eggNOG:COG3670 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
RefSeq:XP_659308.1 ProteinModelPortal:Q5BCM6
EnsemblFungi:CADANIAT00008347 GeneID:2875405 KEGG:ani:AN1704.2
HOGENOM:HOG000166169 OrthoDB:EOG4WDHM3 Uniprot:Q5BCM6
Length = 575
Score = 138 (53.6 bits), Expect = 2.9e-11, Sum P(3) = 2.9e-11
Identities = 40/126 (31%), Positives = 61/126 (48%)
Query: 409 DFGVINPAYMAKKSRYVYAAVGDPMPK-ISGVVKLDVSKGDERRDCIVATRIFGPGCYGG 467
+ +NP Y+ RY YA + + G+VK D G+ + + + PG
Sbjct: 452 ELATLNPFYITHPHRYTYAVTDRGLSTFVDGIVKFDSLTGETK---LWSEHAQSPG---- 504
Query: 468 EPFFVARDPENPETEEDDGYVVSYVHDENTGESKFLVMDAKSPRLDIVAAVKLPRRVPYG 527
E FVA DP+ E EDDG ++S V D +G S LV+DA + + + + V +G
Sbjct: 505 EAIFVA-DPDGKE--EDDGVLLSVVLDGRSGRSYLLVLDAGN--MKEIGRASVNAAVGFG 559
Query: 528 FHGLFV 533
FHG+ V
Sbjct: 560 FHGVHV 565
Score = 95 (38.5 bits), Expect = 2.9e-11, Sum P(3) = 2.9e-11
Identities = 37/159 (23%), Positives = 63/159 (39%)
Query: 233 AHPKLDSDTGEAFAFR--YGPVPPFLTYFRFDANGKKQPNVPIFSMTRPSFLHDFAITKK 290
+H K D +TG+ + + + P FR A + + F+ P++LH F +T
Sbjct: 227 SHAKSDPETGDVYNYNLSFSSGTPTYRVFRVSAETGETSILAAFTAA-PAYLHSFFLTGD 285
Query: 291 YAVFVDIQIGMNPMEMIFGGGSPVGADPAKVCRIGIIPRYATDESQ---MRWFEVPGFNI 347
Y V ++P + GS +GA +I Y D + +E F
Sbjct: 286 YVVICVWNAHLSPEGFMKKPGSYIGAIKEFDNQIPA-KWYVVDRRHGGLVAVYESQAFFC 344
Query: 348 IHAINAWDEEDGNAVVMVAPNILSVEHTL-DRTDLVHAL 385
H INAW E + + + E + + D++H L
Sbjct: 345 FHTINAWQETSNPSDSSTSQLDIVAECIMYENPDILHKL 383
Score = 42 (19.8 bits), Expect = 2.9e-11, Sum P(3) = 2.9e-11
Identities = 16/58 (27%), Positives = 22/58 (37%)
Query: 96 DELPPTECEVVQGSLPSCLDGAYIRNGPNPQYLP--RGPY----HLFDGDGMLHSIKI 147
++ P E V GS+P G R GP + G H FDG H ++
Sbjct: 27 EQKTPIELSVT-GSIPHYAAGTLYRTGPGRYKVDTKHGNTFQVSHWFDGFSQTHRFQL 83
>UNIPROTKB|E9PJJ1 [details] [associations]
symbol:BCO2 "Beta,beta-carotene 9',10'-oxygenase"
species:9606 "Homo sapiens" [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0016116 "carotenoid metabolic process"
evidence=IEA] [GO:0016121 "carotene catabolic process"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0051881 "regulation of
mitochondrial membrane potential" evidence=IEA] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=IEA] InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
EMBL:AP002884 HGNC:HGNC:18503 ChiTaRS:BCO2 IPI:IPI00985076
ProteinModelPortal:E9PJJ1 SMR:E9PJJ1 Ensembl:ENST00000532593
ArrayExpress:E9PJJ1 Bgee:E9PJJ1 Uniprot:E9PJJ1
Length = 474
Score = 125 (49.1 bits), Expect = 1.8e-09, Sum P(3) = 1.8e-09
Identities = 30/72 (41%), Positives = 41/72 (56%)
Query: 463 GCYGGEPFFVARDPENPETEEDDGYVVSYVHDENTGESKF-LVMDAKSPRLDIVAAVKLP 521
G Y EP FV P EED G ++S V N ES F LV+DAK+ + + ++P
Sbjct: 406 GFYPSEPVFV---PAPGTNEEDGGVILSVVITPNQNESNFILVLDAKN--FEELGRAEVP 460
Query: 522 RRVPYGFHGLFV 533
++PYGFHG F+
Sbjct: 461 VQMPYGFHGTFI 472
Score = 85 (35.0 bits), Expect = 1.8e-09, Sum P(3) = 1.8e-09
Identities = 43/172 (25%), Positives = 74/172 (43%)
Query: 214 DIETIGRH---DFDGKLAMS-MTAHPKLDSDTGEAFAF--RYGP---------VPPFLTY 258
DIET+ + D+ +A++ TAHP D D G A+ +GP VPP
Sbjct: 97 DIETLEKTEKVDWSKFIAVNGATAHPHYDLD-GTAYNMGNSFGPYGFSYKVIRVPPEKVD 155
Query: 259 FRFDANGKKQP-NVPIFSMTRPSFLHDFAITKKYAVFVDIQIGMNPMEM----IFGGGSP 313
+G + ++ +PS+ H F +T+ Y +F++ + MN ++ I G
Sbjct: 156 LGETIHGVQVICSIASTEKGKPSYYHSFGMTRNYIIFIEQPLKMNLWKIATSKIRGKAFS 215
Query: 314 VGADPAKVC--RIGIIPRYATDESQMRWFEVPGFNIIHAINAWDEEDGNAVV 363
G C R ++ + R++ P F H INA+ E+ G ++
Sbjct: 216 DGISWEPQCNTRFHVVEKRTGQLLPGRYYSKP-FVTFHQINAF-EDQGCVII 265
Score = 45 (20.9 bits), Expect = 1.8e-09, Sum P(3) = 1.8e-09
Identities = 16/54 (29%), Positives = 28/54 (51%)
Query: 141 MLHSIKISRGRATLCSRYVR--TYKYT------IENEAGSPILP----NVFSGF 182
+LH ++++G T S++++ TYK + +E G+ LP NVF F
Sbjct: 3 LLHQFRMAKGTVTYRSKFLQSDTYKANSAKNRIVISEFGTLALPDPCKNVFERF 56
>UNIPROTKB|F1N2Z9 [details] [associations]
symbol:BCO2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000377 "regulation of reactive oxygen species
metabolic process" evidence=IEA] [GO:0051881 "regulation of
mitochondrial membrane potential" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016121 "carotene catabolic process"
evidence=IEA] [GO:0016116 "carotenoid metabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
GO:GO:0055114 GeneTree:ENSGT00500000044783 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 GO:GO:0016121 EMBL:DAAA02040291
EMBL:DAAA02040290 IPI:IPI00729522 Ensembl:ENSBTAT00000048395
OMA:ICSIASE Uniprot:F1N2Z9
Length = 530
Score = 111 (44.1 bits), Expect = 6.1e-09, Sum P(3) = 6.1e-09
Identities = 34/101 (33%), Positives = 47/101 (46%)
Query: 95 VDELPPTECEVVQGSLPSCLDGAYIRNGPNPQYLPRGPY-HLFDGDGMLHSIKISRGRAT 153
V+E P VQG P L G +R GP + Y H FDG +LH K+ +G T
Sbjct: 39 VEETPQVISAGVQGHFPEWLSGYLLRVGPGKFEFGKDKYNHWFDGMALLHQFKVEKGTVT 98
Query: 154 LCSRYVR--TYKYTIE------NEAGSPILP----NVFSGF 182
S++++ TYK + +E G+ LP NVF F
Sbjct: 99 YRSKFLQSDTYKANSDRDRIVISEFGTLALPDPCKNVFERF 139
Score = 79 (32.9 bits), Expect = 6.1e-09, Sum P(3) = 6.1e-09
Identities = 24/94 (25%), Positives = 43/94 (45%)
Query: 278 RPSFLHDFAITKKYAVFVDIQIGMNPMEMI--------FGGGSPVGADPAKVCRIGIIPR 329
RPS+ H F +T+ Y +F++ + +N +I F G + +P R ++ +
Sbjct: 255 RPSYYHSFGMTRNYIIFIEQPLKINLWRIISSKIRGKAFSDG--ISWEPQYNTRFHVVDK 312
Query: 330 YATDESQMRWFEVPGFNIIHAINAWDEEDGNAVV 363
+ +F P F H INA+ E+ G V+
Sbjct: 313 HTGQLLPGMYFSKP-FVTFHQINAF-EDQGCVVI 344
Score = 63 (27.2 bits), Expect = 6.1e-09, Sum P(3) = 6.1e-09
Identities = 16/40 (40%), Positives = 21/40 (52%)
Query: 463 GCYGGEPFFVARDPENPETEEDDGYVVSYVHDENTGESKF 502
G Y EP FV P ++EDDG ++S V N + KF
Sbjct: 485 GFYPSEPVFV---PVPGASKEDDGVILSVVITPNQEQKKF 521
>UNIPROTKB|F1N3B7 [details] [associations]
symbol:BCMO1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003834 "beta-carotene 15,15'-monooxygenase activity"
evidence=IEA] [GO:0001523 "retinoid metabolic process"
evidence=IEA] GO:GO:0001523 GeneTree:ENSGT00500000044783
OMA:ITENYIV GO:GO:0003834 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 EMBL:DAAA02046109 EMBL:DAAA02046110 IPI:IPI00702818
Ensembl:ENSBTAT00000048748 Uniprot:F1N3B7
Length = 494
Score = 117 (46.2 bits), Expect = 6.4e-09, Sum P(3) = 6.4e-09
Identities = 28/76 (36%), Positives = 38/76 (50%)
Query: 96 DELPPTECEVVQGSLPSCLDGAYIRNGPNPQYLPRGPY-HLFDGDGMLHSIKISRGRATL 154
++L P V G +P+ L G +RNGP + Y H FDG +LHS I G
Sbjct: 11 EQLEPVRARVT-GKIPAWLQGILLRNGPGMHTVGETRYNHWFDGLALLHSFTIRDGEVYY 69
Query: 155 CSRYVRTYKYTIENEA 170
S+Y+R+ YT EA
Sbjct: 70 RSKYLRSDTYTANIEA 85
Score = 70 (29.7 bits), Expect = 6.4e-09, Sum P(3) = 6.4e-09
Identities = 32/105 (30%), Positives = 49/105 (46%)
Query: 408 LDFGVINPAYMAKKSRYVYAA--VGDPMPKI--SGVVKLDVSKGDERRDCIVATRIFGPG 463
L+ IN A+ + RY++AA P+PK+ S +V S R +
Sbjct: 404 LELPHINYAHNGQPYRYIFAAGVQWSPIPKLFYSSIVA-QWSSLTWREE----------H 452
Query: 464 CYGGEPFFVARDPENPETEEDDGYVVSYVHDENTGESKFL-VMDA 507
C+ EP FV P +EDDG ++S + + +S FL V+DA
Sbjct: 453 CWPAEPLFV---PTPGAKDEDDGIILSAIVSTDPQKSPFLLVLDA 494
Score = 64 (27.6 bits), Expect = 6.4e-09, Sum P(3) = 6.4e-09
Identities = 23/96 (23%), Positives = 43/96 (44%)
Query: 270 NVPIFSMTRPSFLHDFAITKKYAVFVDIQIGMNPMEM----IFG--GGSPVGADPAKVCR 323
++ S+ PS+ H F +++ Y +F++ ++ ++M I G S +
Sbjct: 224 SIAAHSLLSPSYYHSFGVSENYIIFLEQPFKLDILKMATAYIRGVSWASCLAFHGEDKTH 283
Query: 324 IGIIPRYATDESQMRWFEVPGFNIIHAINAWDEEDG 359
I II R ++ P + H +NA+ EEDG
Sbjct: 284 IHIIDRRTRKPVPTKYHTDP-MVVFHHVNAY-EEDG 317
>UNIPROTKB|G4MX63 [details] [associations]
symbol:MGG_08016 "Retinal pigment epithelial membrane
family protein" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] EMBL:CM001232
RefSeq:XP_003714968.1 ProteinModelPortal:G4MX63
EnsemblFungi:MGG_08016T0 GeneID:2678282 KEGG:mgr:MGG_08016
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055 Uniprot:G4MX63
Length = 558
Score = 145 (56.1 bits), Expect = 7.2e-09, Sum P(3) = 7.2e-09
Identities = 47/121 (38%), Positives = 61/121 (50%)
Query: 413 INPAYMAKKSRYVYAAVGDPMPK-ISGVVKLDVSKGDERRDCIVATRIFGPGCYGGEPFF 471
IN AY A+K R+VY + G+VKLDV G+ I +R PG EP F
Sbjct: 441 INEAYRARKHRFVYGVTATGKSTFLDGLVKLDVDTGET----ICWSR---PGQTASEPIF 493
Query: 472 VAR-DPENPETEEDDGYVVSYVHDENTGESKFLVMDAKSPRLDIVAAVKLPRRVPYGFHG 530
VA DP ED G +++ V D GES LV++AK + VA + V +GFHG
Sbjct: 494 VADPDPSVYGILEDAGVLLTVVLDGIQGESYLLVLNAKD--MTEVARADVGGVVGFGFHG 551
Query: 531 L 531
L
Sbjct: 552 L 552
Score = 53 (23.7 bits), Expect = 7.2e-09, Sum P(3) = 7.2e-09
Identities = 35/170 (20%), Positives = 64/170 (37%)
Query: 222 DFDGKLAMSMTAHPKLDSDTGEAFAFRYGPVPPFLTYFRFDANGKKQPNVPIFSMTRPS- 280
D G L+ AH TG+ F + + + TY F + + ++ P+
Sbjct: 210 DLAGPLS---AAHASTCPKTGDVFNYNL-ELGRYQTYRVFVVSAATGETSILATIKYPAA 265
Query: 281 FLHDFAITKKYAVFV--DIQIGMNPMEMIFGGG-SPVGA--DPAKVCRIGIIPRYATDES 335
+LH +++ Y + + M + ++ + A D K +I R
Sbjct: 266 YLHSLFLSENYVILCVWNCFYSMGGVSTLWTRNLAEAFAPYDKTKPATWFVIDRKPGGRG 325
Query: 336 QMRWFEVPGFNIIHAINAWDEEDGNAVVMVAPNILSVEHTLDRTDLVHAL 385
++ FE F H INA++ E G +I++ T D D + L
Sbjct: 326 LVKTFESDAFYAFHTINAYEVE-GKGEDASEVDIVADVCTFDNIDSITRL 374
Score = 52 (23.4 bits), Expect = 7.2e-09, Sum P(3) = 7.2e-09
Identities = 12/30 (40%), Positives = 16/30 (53%)
Query: 97 ELPPTECEVVQGSLPSCLDGAYIRNGPNPQ 126
EL P E V+G +P+ G RNG P+
Sbjct: 22 ELEPKEL-TVKGDIPAYCAGVLFRNGLGPR 50
>WB|WBGene00018755 [details] [associations]
symbol:bcmo-2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
GO:GO:0040010 eggNOG:COG3670 GeneTree:ENSGT00500000044783
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055 EMBL:FO080905
RefSeq:NP_494694.2 ProteinModelPortal:Q9TXT9 PaxDb:Q9TXT9
EnsemblMetazoa:F53C3.12 GeneID:173733 KEGG:cel:CELE_F53C3.12
CTD:173733 WormBase:F53C3.12 HOGENOM:HOG000153586 InParanoid:Q9TXT9
OMA:MEAQRIV NextBio:880851 Uniprot:Q9TXT9
Length = 530
Score = 108 (43.1 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 39/119 (32%), Positives = 58/119 (48%)
Query: 420 KKSRYVYAA--VGDPMPK-ISGVVKLDVSKGDERRDCIVATRIFGPGCYGGEPFFVARDP 476
K YVY + +G + + G+VK D+ GD + R GEP FV P
Sbjct: 419 KPYNYVYGSSVLGAQKSETLPGIVKADLENGDHK-----VWRRENDKQICGEPIFV---P 470
Query: 477 ENPE-TEEDDGYVVSYVHDENTGESKF-LVMDAKSPRLDIVAAVKLPR-RVPYGFHGLF 532
NPE EDDG ++ V + G+ F L+++AK+ L +A +P R+P GFH +
Sbjct: 471 -NPEGVREDDGILIVPVMTISDGQRPFVLILEAKN--LTEIARYTIPEARIPLGFHAFY 526
Score = 97 (39.2 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 29/84 (34%), Positives = 37/84 (44%)
Query: 88 LSDNFAPVDELPPTECEVVQGSLPSCLDGAYIRNGPNPQYLPRGPY-HLFDGDGMLHSIK 146
L NF V E P C GS+PS L G +RNGP + Y H FDG G +
Sbjct: 9 LFHNFDNVIE--PKLCST-SGSVPSYLKGTMLRNGPGMFEIGDTKYQHWFDGMGFIQRYH 65
Query: 147 ISRGRATLCSRYVRTYKYTIENEA 170
G+ +RY+ + Y EA
Sbjct: 66 FEDGKMYYSARYLESENYKKNMEA 89
Score = 44 (20.5 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 22/93 (23%), Positives = 41/93 (44%)
Query: 279 PSFLHDFAITKKYAVFVDIQIGMNPMEMI--------FGGGSPVGADPAKVCRIGIIPRY 330
P+++H F +++ Y + + I ++ + I F AD K +I I+ +
Sbjct: 233 PTYMHSFGMSENYLIMFESPIRIDIKKFIMKRFITTTFRDCMKWHAD--KDVKIFILNKK 290
Query: 331 ATDESQMRWFEVPGFNIIHAINAWDEEDGNAVV 363
++ ++ P F HA N + E DG VV
Sbjct: 291 TGEQVPLKLKMAPFFTFHHA-NTF-ERDGCLVV 321
Score = 38 (18.4 bits), Expect = 6.6e-08, Sum P(3) = 6.6e-08
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 307 IFGGGSPVGADPAKVCRIGIIPRYATDESQMRW 339
++ GS G D A V + P+ +S W
Sbjct: 184 VYNIGSRFGPDAAHVFTVTKNPKNLQSDSDRSW 216
>UNIPROTKB|F1P321 [details] [associations]
symbol:RPE65 "Retinoid isomerohydrolase" species:9031
"Gallus gallus" [GO:0004744 "retinal isomerase activity"
evidence=IEA] [GO:0007468 "regulation of rhodopsin gene expression"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0008286 "insulin receptor signaling pathway" evidence=IEA]
[GO:0042574 "retinal metabolic process" evidence=IEA] [GO:0060042
"retina morphogenesis in camera-type eye" evidence=IEA] [GO:0071257
"cellular response to electrical stimulus" evidence=IEA]
GeneTree:ENSGT00500000044783 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 IPI:IPI00584895 EMBL:AADN02012423
Ensembl:ENSGALT00000018373 Uniprot:F1P321
Length = 449
Score = 101 (40.6 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 28/75 (37%), Positives = 39/75 (52%)
Query: 462 PGCYGGEPFFVARDPENPETEEDDGYVVSYVHDENTGESK--FLVMDAKSPRLDIVAAVK 519
P Y EP FV+ P+ EEDDG V+S V +G L+++AK + VA +
Sbjct: 379 PDSYPSEPIFVSH-PD--ALEEDDGVVLSIVISPGSGPKPAYLLILNAKD--MSEVARAE 433
Query: 520 LPRRVPYGFHGLFVR 534
+ +P FHGLF R
Sbjct: 434 VEVNIPVTFHGLFKR 448
Score = 93 (37.8 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 44/181 (24%), Positives = 84/181 (46%)
Query: 205 YAIRLTPNGDIETIGRHDFDGKLAMS-MTAHPKLDSDT---------GEAFAFRYG--PV 252
+ ++ P+ +ETI + D ++++ TAHP +++D G+ F+ Y +
Sbjct: 67 FITKINPD-TLETIKQVDLCKYVSVNGATAHPHVENDGTVYNIGNCFGKNFSLAYNIIRI 125
Query: 253 PPFLTYFRFDANGKKQPNV--PIFSMTRPSFLHDFAITKKYAVFVDIQIGMNPMEMIFGG 310
PP L + D K + V P +PS++H F +T Y VFV+ + +N ++ +
Sbjct: 126 PP-LQADKEDPMNKSEVVVQFPCSDRFKPSYVHSFGLTPNYIVFVETPVKINLLKFL-SS 183
Query: 311 GSPVGADPAKVCR----IGIIPRYATDESQMRWFEVP----GFNIIHAINAWDEEDGNAV 362
S GA+ +G+ A ++ + R + FN+ H IN + E++G +
Sbjct: 184 WSLWGANYMDCFESNETMGVWLHVA-EKKKGRLLNIKYRTSAFNLFHHINTF-EDNGFLI 241
Query: 363 V 363
V
Sbjct: 242 V 242
>UNIPROTKB|F1NE28 [details] [associations]
symbol:RPE65 "Retinoid isomerohydrolase" species:9031
"Gallus gallus" [GO:0004744 "retinal isomerase activity"
evidence=IEA] [GO:0007468 "regulation of rhodopsin gene expression"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0008286 "insulin receptor signaling pathway" evidence=IEA]
[GO:0042574 "retinal metabolic process" evidence=IEA] [GO:0060042
"retina morphogenesis in camera-type eye" evidence=IEA] [GO:0071257
"cellular response to electrical stimulus" evidence=IEA]
GeneTree:ENSGT00500000044783 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 OMA:WLHVADK EMBL:AADN02012423 IPI:IPI00821971
Ensembl:ENSGALT00000037886 Uniprot:F1NE28
Length = 458
Score = 101 (40.6 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 28/75 (37%), Positives = 39/75 (52%)
Query: 462 PGCYGGEPFFVARDPENPETEEDDGYVVSYVHDENTGESK--FLVMDAKSPRLDIVAAVK 519
P Y EP FV+ P+ EEDDG V+S V +G L+++AK + VA +
Sbjct: 388 PDSYPSEPIFVSH-PD--ALEEDDGVVLSIVISPGSGPKPAYLLILNAKD--MSEVARAE 442
Query: 520 LPRRVPYGFHGLFVR 534
+ +P FHGLF R
Sbjct: 443 VEVNIPVTFHGLFKR 457
Score = 93 (37.8 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 44/181 (24%), Positives = 84/181 (46%)
Query: 205 YAIRLTPNGDIETIGRHDFDGKLAMS-MTAHPKLDSDT---------GEAFAFRYG--PV 252
+ ++ P+ +ETI + D ++++ TAHP +++D G+ F+ Y +
Sbjct: 76 FITKINPD-TLETIKQVDLCKYVSVNGATAHPHVENDGTVYNIGNCFGKNFSLAYNIIRI 134
Query: 253 PPFLTYFRFDANGKKQPNV--PIFSMTRPSFLHDFAITKKYAVFVDIQIGMNPMEMIFGG 310
PP L + D K + V P +PS++H F +T Y VFV+ + +N ++ +
Sbjct: 135 PP-LQADKEDPMNKSEVVVQFPCSDRFKPSYVHSFGLTPNYIVFVETPVKINLLKFL-SS 192
Query: 311 GSPVGADPAKVCR----IGIIPRYATDESQMRWFEVP----GFNIIHAINAWDEEDGNAV 362
S GA+ +G+ A ++ + R + FN+ H IN + E++G +
Sbjct: 193 WSLWGANYMDCFESNETMGVWLHVA-EKKKGRLLNIKYRTSAFNLFHHINTF-EDNGFLI 250
Query: 363 V 363
V
Sbjct: 251 V 251
>UNIPROTKB|Q7XU29 [details] [associations]
symbol:OSJNBb0034G17.9 "OSJNBb0034G17.9 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0009733 "response
to auxin stimulus" evidence=IMP] [GO:0010223 "secondary shoot
formation" evidence=IMP] [GO:0016121 "carotene catabolic process"
evidence=ISS] [GO:0045549 "9-cis-epoxycarotenoid dioxygenase
activity" evidence=ISS] GO:GO:0009570 GO:GO:0009733 GO:GO:0009926
EMBL:AP008210 EMBL:CM000141 eggNOG:COG3670 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 GO:GO:0016121 GO:GO:0010223
GO:GO:0045549 GO:GO:0016124 EMBL:AL663000 RefSeq:NP_001053491.1
UniGene:Os.26493 UniGene:Os.56287 UniGene:Os.7470
EnsemblPlants:LOC_Os04g46470.1 GeneID:4336591 KEGG:osa:4336591
HOGENOM:HOG000240947 OMA:VMKNVAN ProtClustDB:PLN02969
Uniprot:Q7XU29
Length = 609
Score = 132 (51.5 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 55/162 (33%), Positives = 79/162 (48%)
Query: 388 KVRIDL-RTGIVTR---RPMS---ARNLDFGVINPAYMAKKSRYVYA--AVGD----PMP 434
+V I+L RTG R R +S AR DF INP+Y +++R+VYA A G P
Sbjct: 456 QVAIELDRTGECRRCSVRRLSDQHARPADFPAINPSYANQRNRFVYAGAASGSRRFLPYF 515
Query: 435 KISGVVKLDVSKGDERRDCIVATRIFGPGCYGGEPFFVARDPENPETEEDDGYVVSYVHD 494
VVK+DVS G R + + GEP FV P ED GYV+ +
Sbjct: 516 PFDSVVKVDVSDGSARWWSTDGRK------FVGEPVFV---PTGGG--EDGGYVLLVEYA 564
Query: 495 ENTGESKFLVMDAKSPRLD--IVAAVKLPRRV--PYGFHGLF 532
+ +V+DAK + +VA +++P+ + P GFHG +
Sbjct: 565 VSKHRCHLVVLDAKKIGTENALVAKLEVPKNLTFPMGFHGFW 606
Score = 59 (25.8 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 23/82 (28%), Positives = 34/82 (41%)
Query: 95 VDELPPTECEVVQGSLPSCLD-GAYIRNGPNPQYLPRGP-YHLFDGDGMLHSIKISRGRA 152
+D +P V +G++P G Y GP G H DG G L S + G
Sbjct: 68 LDSIP---LRVTEGAIPPDFPAGTYYLAGPGIFSDDHGSTVHPLDGHGYLRSFRFRPGDR 124
Query: 153 TL--CSRYVRTYKYTIENEAGS 172
T+ +R+V T E+ G+
Sbjct: 125 TIHYSARFVETAAKREESRDGA 146
Score = 45 (20.9 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 8/33 (24%), Positives = 19/33 (57%)
Query: 120 RNGPNPQYLPRGPYHLFDGDGMLHSIKISRGRA 152
R+G + ++ RGP+ + G + ++K+ + A
Sbjct: 143 RDGASWRFTHRGPFSVLQGGKKVGNVKVMKNVA 175
>FB|FBgn0002937 [details] [associations]
symbol:ninaB "neither inactivation nor afterpotential B"
species:7227 "Drosophila melanogaster" [GO:0007604
"phototransduction, UV" evidence=IMP] [GO:0016063 "rhodopsin
biosynthetic process" evidence=IDA;IMP] [GO:0007603
"phototransduction, visible light" evidence=IMP] [GO:0007602
"phototransduction" evidence=TAS] [GO:0003834 "beta-carotene
15,15'-monooxygenase activity" evidence=IMP;IDA;NAS] [GO:0016119
"carotene metabolic process" evidence=IDA] [GO:0035238 "vitamin A
biosynthetic process" evidence=IMP;IDA] [GO:0009110 "vitamin
biosynthetic process" evidence=IMP] [GO:0010436 "carotenoid
dioxygenase activity" evidence=IDA] [GO:0042574 "retinal metabolic
process" evidence=IDA] [GO:0004744 "retinal isomerase activity"
evidence=IDA] GO:GO:0042574 GO:GO:0007602 eggNOG:COG3670
GO:GO:0003834 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
GO:GO:0035238 GO:GO:0016119 GO:GO:0010436 GO:GO:0016063
GO:GO:0004744 EMBL:AB041507 ProteinModelPortal:Q9NKW9 SMR:Q9NKW9
STRING:Q9NKW9 PRIDE:Q9NKW9 FlyBase:FBgn0002937 InParanoid:Q9NKW9
OrthoDB:EOG4TTF03 ArrayExpress:Q9NKW9 Bgee:Q9NKW9 Uniprot:Q9NKW9
Length = 620
Score = 89 (36.4 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 20/55 (36%), Positives = 29/55 (52%)
Query: 108 GSLPSCLDGAYIRNGPNPQYLPRGPY-HLFDGDGMLHSIKISRGRATLCSRYVRT 161
G +P + G+ +RNGP + + HLFD +LH I GR T +R+V T
Sbjct: 63 GHIPKWICGSLLRNGPGSWKVGDMTFGHLFDCSALLHRFAIRNGRVTYQNRFVDT 117
Score = 79 (32.9 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 63/268 (23%), Positives = 110/268 (41%)
Query: 202 DLPYAIRLTPNGDIETIGR---HDFDGKLAMSMTAHPK-LDSDT----GEAFAFRYGPVP 253
+ P+ R+ P + T R DF G ++ T+HP L S T G R GP
Sbjct: 179 ETPFMHRINPC-TLATEARICTTDFVG--VVNHTSHPHVLPSGTVYNLGTTMT-RSGPAY 234
Query: 254 PFLTYFRFDA---NGKKQPNVPIFSMTRPSFLHDFAITKKYAVFVDIQIGMNPMEMIFG- 309
L + + + +P P ++H F +T Y V V+ + ++ E I
Sbjct: 235 TILCFPHGEQMFEDAHVVATLPCRWKLHPGYMHTFGLTDHYFVIVEQPLSVSLTEYIKAQ 294
Query: 310 -GGSPVGAD----PAKVCRIGIIPRYATDESQMRWFEVPGFNIIHAINAWDEEDGNAVVM 364
GG + A + +I R + Q +E F +H IN + E DG+ VV
Sbjct: 295 LGGQNLSACLKWFEDRPTLFHLIDRVSGKLVQT--YESEAFFYLHIINCF-ERDGHVVV- 350
Query: 365 VAPNILSVEHTLDRTDLVHALVEKVRIDLRTG-----IVTRRPMSARNLDFGVINPAYMA 419
+I S + ++++ + + +++T + RP+ L G I PA +A
Sbjct: 351 ---DICSYRNP----EMINCMYLEAIANMQTNPNYATLFRGRPLRFV-LPLGTIPPASIA 402
Query: 420 KKSRYV-YAAVGDPMPKISGVVKLDVSK 446
K+ ++ G P++S +K VS+
Sbjct: 403 KRGLVKSFSLAGLSAPQVSRTMKHSVSQ 430
Score = 65 (27.9 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 24/75 (32%), Positives = 35/75 (46%)
Query: 417 YMAKKSRYVYAAVGDPMPKISG-VVKLDVSKGDERRDCIVATRIFGPGCYGGEPFFVARD 475
YM K RY YA D G ++K+DV + C+ Y EP FV
Sbjct: 507 YMGKNYRYFYAISSDVDAVNPGTLIKVDVWN----KSCLTWCE---ENVYPSEPIFVP-S 558
Query: 476 PENPETEEDDGYVVS 490
P+ P++E DDG +++
Sbjct: 559 PD-PKSE-DDGVILA 571
>ZFIN|ZDB-GENE-040426-1717 [details] [associations]
symbol:rpe65a "retinal pigment epithelium-specific
protein 65a" species:7955 "Danio rerio" [GO:0052884
"all-trans-retinyl-palmitate hydrolase, 11-cis retinol forming
activity" evidence=IEA] [GO:0052885 "all-trans-retinyl-ester
hydrolase, 11-cis retinol forming activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0050896 "response to stimulus"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
ZFIN:ZDB-GENE-040426-1717 GO:GO:0005886 GO:GO:0005737 GO:GO:0046872
GO:GO:0007601 GO:GO:0050896 eggNOG:COG3670
GeneTree:ENSGT00500000044783 HOGENOM:HOG000232156
HOVERGEN:HBG050679 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 EMBL:AY646886 EMBL:FP102801 EMBL:BC059559
IPI:IPI00485811 RefSeq:NP_957045.1 UniGene:Dr.12451
ProteinModelPortal:Q6PBW5 STRING:Q6PBW5 Ensembl:ENSDART00000004533
GeneID:393724 KEGG:dre:393724 CTD:393724 InParanoid:Q6PBW5
OMA:TSMEFPR OrthoDB:EOG47M1XK NextBio:20814725 Bgee:Q6PBW5
GO:GO:0052885 GO:GO:0052884 Uniprot:Q6PBW5
Length = 531
Score = 110 (43.8 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 25/74 (33%), Positives = 36/74 (48%)
Query: 92 FAPVDELPPTECEVVQGSLPSCLDGAYIRNGPNPQYLPRGP-YHLFDGDGMLHSIKISRG 150
F +EL V G +PS + G+ +R GP P YHLFDG ++H S G
Sbjct: 16 FETAEELNEPLPATVTGRIPSFIKGSLLRLGPGLFEAGAEPFYHLFDGQALMHKFDFSNG 75
Query: 151 RATLCSRYVRTYKY 164
+ T ++V+T Y
Sbjct: 76 QVTYFRKFVKTDAY 89
Score = 77 (32.2 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 39/170 (22%), Positives = 73/170 (42%)
Query: 215 IETIGRHDFDGKLAMS-MTAHPKLDSD-----------TGEAFAFRYGPVPPFLTYFRFD 262
+ET+ + D + ++ +TAHP ++ D G + A+ +PP + D
Sbjct: 160 LETLKKVDMCNYVNINGVTAHPHIERDGTVYNIGNCMGKGASLAYNIVRIPP-TQKDKSD 218
Query: 263 ANGKKQPNVPIFSMTR--PSFLHDFAITKKYAVFVDIQIGMNPMEMIFG----GGSPVG- 315
K + V S R PS++H F +T+ Y VFV+ + +N ++ + G + +
Sbjct: 219 PIEKSKVVVQFPSAERFKPSYVHSFGMTENYFVFVETPVKINLLKFLSAWSIRGSNYMDC 278
Query: 316 --ADPAKVCRIGIIPRYATDESQMRWFEVPGFNIIHAINAWDEEDGNAVV 363
+D K I I ++ + + F + H IN + ED +V
Sbjct: 279 FESDEEKGTWIHIARKHPGEYIDYK-FRTSAMGLFHHINCY--EDSGFIV 325
>RGD|1309022 [details] [associations]
symbol:Bco2 "beta-carotene oxygenase 2" species:10116 "Rattus
norvegicus" [GO:0005739 "mitochondrion" evidence=ISO] [GO:0016116
"carotenoid metabolic process" evidence=ISO] [GO:0016119 "carotene
metabolic process" evidence=ISO] [GO:0016121 "carotene catabolic
process" evidence=ISO] [GO:0016702 "oxidoreductase activity, acting
on single donors with incorporation of molecular oxygen,
incorporation of two atoms of oxygen" evidence=ISO] [GO:0051881
"regulation of mitochondrial membrane potential" evidence=ISO]
[GO:0055114 "oxidation-reduction process" evidence=ISO] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=ISO] InterPro:IPR012606 Pfam:PF08069 RGD:1309022
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 HOVERGEN:HBG050679
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055 IPI:IPI00382241
EMBL:AY325176 UniGene:Rn.162999 ProteinModelPortal:Q7TP70
PRIDE:Q7TP70 UCSC:RGD:1309022 Genevestigator:Q7TP70 Uniprot:Q7TP70
Length = 481
Score = 109 (43.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 28/86 (32%), Positives = 44/86 (51%)
Query: 95 VDELPPTECEVVQGSLPSCLDGAYIRNGPNPQYLPRGPY-HLFDGDGMLHSIKISRGRAT 153
V+E T V+G +P L+G +R GP + Y H FDG +LH K+ +G T
Sbjct: 93 VEETLSTVSARVRGHIPEWLNGYLLRVGPGKFEFGKDRYNHWFDGMALLHQFKMEKGTVT 152
Query: 154 LCSRYVRTYKYTIENEAGSPILPNVF 179
S+++++ Y N AG I+ + F
Sbjct: 153 YKSKFLQSDTYKA-NSAGDRIVISEF 177
Score = 59 (25.8 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 15/34 (44%), Positives = 17/34 (50%)
Query: 463 GCYGGEPFFVARDPENPETEEDDGYVVSYVHDEN 496
GCY EP FV P EED G ++S V N
Sbjct: 408 GCYPSEPVFV---PVPGADEEDSGAILSVVITPN 438
>RGD|1597300 [details] [associations]
symbol:Tex12 "testis expressed 12" species:10116 "Rattus
norvegicus" [GO:0000795 "synaptonemal complex" evidence=ISO]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] InterPro:IPR012606 Pfam:PF08069 RGD:1597300
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GeneTree:ENSGT00500000044783 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 IPI:IPI00382241 Ensembl:ENSRNOT00000059191
UCSC:RGD:1597300 ArrayExpress:F1LMB4 Uniprot:F1LMB4
Length = 481
Score = 109 (43.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 28/86 (32%), Positives = 44/86 (51%)
Query: 95 VDELPPTECEVVQGSLPSCLDGAYIRNGPNPQYLPRGPY-HLFDGDGMLHSIKISRGRAT 153
V+E T V+G +P L+G +R GP + Y H FDG +LH K+ +G T
Sbjct: 93 VEETLSTVSARVRGHIPEWLNGYLLRVGPGKFEFGKDRYNHWFDGMALLHQFKMEKGTVT 152
Query: 154 LCSRYVRTYKYTIENEAGSPILPNVF 179
S+++++ Y N AG I+ + F
Sbjct: 153 YKSKFLQSDTYKA-NSAGDRIVISEF 177
Score = 59 (25.8 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 15/34 (44%), Positives = 17/34 (50%)
Query: 463 GCYGGEPFFVARDPENPETEEDDGYVVSYVHDEN 496
GCY EP FV P EED G ++S V N
Sbjct: 408 GCYPSEPVFV---PVPGADEEDSGAILSVVITPN 438
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.140 0.428 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 542 504 0.00085 119 3 11 22 0.39 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 57
No. of states in DFA: 611 (65 KB)
Total size of DFA: 294 KB (2152 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 39.29u 0.11s 39.40t Elapsed: 00:00:02
Total cpu time: 39.31u 0.11s 39.42t Elapsed: 00:00:02
Start: Mon May 20 16:58:41 2013 End: Mon May 20 16:58:43 2013