Query 044599
Match_columns 542
No_of_seqs 231 out of 1090
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 08:09:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044599.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044599hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3npe_A 9-CIS-epoxycarotenoid d 100.0 5E-127 2E-131 1047.7 44.5 481 50-542 7-528 (529)
2 2biw_A Apocarotenoid-cleaving 100.0 5E-112 2E-116 923.1 39.6 429 88-535 20-490 (490)
3 3kvc_A Retinoid isomerohydrola 100.0 2E-105 6E-110 880.0 37.4 431 87-535 11-533 (533)
4 1qks_A Cytochrome CD1 nitrite 48.7 2.1E+02 0.0071 30.7 14.0 103 389-521 180-285 (567)
5 4guc_A Protein BA_2500; virule 34.4 86 0.0029 27.0 6.3 46 240-294 35-87 (120)
6 2iwa_A Glutamine cyclotransfer 34.3 1.8E+02 0.0063 28.1 9.8 74 423-521 32-105 (266)
7 3mbr_X Glutamine cyclotransfer 26.1 1.6E+02 0.0056 28.2 7.6 24 423-448 31-54 (243)
8 1kb0_A Quinohemoprotein alcoho 23.7 5.7E+02 0.02 27.7 12.5 69 437-521 283-356 (677)
9 3nol_A Glutamine cyclotransfer 23.6 1.1E+02 0.0037 29.9 5.9 23 424-448 54-76 (262)
10 3c75_H MADH, methylamine dehyd 22.7 3.2E+02 0.011 28.2 9.7 80 422-521 84-168 (426)
11 1fwx_A Nitrous oxide reductase 21.0 1.5E+02 0.005 32.5 6.8 82 422-522 101-195 (595)
No 1
>3npe_A 9-CIS-epoxycarotenoid dioxygenase 1, chloroplasti; seven blade beta propeller, abscisic acid, non iron, oxidoreductase; 3.20A {Zea mays}
Probab=100.00 E-value=5.1e-127 Score=1047.69 Aligned_cols=481 Identities=39% Similarity=0.736 Sum_probs=434.9
Q ss_pred CCCCCCCChhHHHHHHHHHHHhhhc---CCCCCCCCCCcccccCCCcccccCCCCccceeeccCCCCCcceEEeecCCCC
Q 044599 50 PKKRAEPTIPTIILNACDDIINNFI---DPPLKYSVDPRHVLSDNFAPVDELPPTECEVVQGSLPSCLDGAYIRNGPNPQ 126 (542)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~p~~~~~~p~~~l~gnfapv~E~~~~~~~~V~G~IP~~L~Gt~~RNGP~p~ 126 (542)
++-.+.|++++++||++|++|.+++ ++|+++++||..+|+|||+||.|++...++.|+|+||+||+|+||||||||+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~fapv~ee~~~~~l~V~G~IP~~L~Gt~~RNGpnP~ 86 (529)
T 3npe_A 7 KQLNLFQRAAAAALDAFEEGFVANVLERPHGLPSTADPAVQIAGNFAPVGERPPVHELPVSGRIPPFIDGVYARNGANPC 86 (529)
T ss_dssp -CCCSHHHHHHHHHHHHHHHTCCCCCCTTSCCCTTTCHHHHTSGGGSCCCCEEEEESCCEEECCCTTCEEEEEECCBCCS
T ss_pred CCCChhHHHHHHHHHHHHHHHHhhhccccCCCCCCCCccchhccCcccccccCCcccceEeecCCccCCceEEEecCCcC
Confidence 3456788999999999999888864 6899999999999999999997776666678999999999999999999998
Q ss_pred CCCCCCccCcCCCcceEEEEeecCce-eEEEEeecchhhHHhhhcCCCCCcccccCCCCC--------------------
Q 044599 127 YLPRGPYHLFDGDGMLHSIKISRGRA-TLCSRYVRTYKYTIENEAGSPILPNVFSGFNGL-------------------- 185 (542)
Q Consensus 127 ~~~~~~~HwFDGdGmlh~~~f~~G~v-~y~sRyV~T~~~~~E~~~g~~~f~~~~s~~~~~-------------------- 185 (542)
+.+.+++||||||||||+|+|++|+| +|+||||||++|++|+++|+++|++.++.+.+.
T Consensus 87 f~~~~~~HwFDGdGmlh~~~f~~G~a~~y~nRfVrT~~~~~e~~agr~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ 166 (529)
T 3npe_A 87 FDPVAGHHLFDGDGMVHALRIRNGAAESYACRFTETARLRQERAIGRPVFPKAIGELHGHSGIARLALFYARAACGLVDP 166 (529)
T ss_dssp SCCSSCCCGGGSCBEEEEEEEETTEEEEEEEEECCCHHHHHHHHHTSCCSCCTTTTTTSSTHHHHHHHHHHHHHTTSCCG
T ss_pred cCCcCCCccCCCCceEEEEEECCCccceEEEeEecCHHHHHHHHcCCcccccccccccccchhhhhhhhhhhcccccccc
Confidence 87777899999999999999999999 999999999999999999999998766543221
Q ss_pred --CcCccchhh--hHhHHhc----cCCEEeecCCCCCcceeecccCCCcccccccCCCccCCCCCcEEEEEEcCC-CCcE
Q 044599 186 --TASAARGAL--SAARLLA----DLPYAIRLTPNGDIETIGRHDFDGKLAMSMTAHPKLDSDTGEAFAFRYGPV-PPFL 256 (542)
Q Consensus 186 --~~~~an~~~--~~~rlla----~~Py~i~i~p~~tLeT~G~~d~~g~l~~~ftAHPk~Dp~tGel~~f~~~~~-~p~~ 256 (542)
..+.||+++ +.+|+|| |+||++++||++||||+|++||+|+|..+||||||+||+||||++|+|+.. +|++
T Consensus 167 ~~~~~~ANtnvv~~~g~llAl~E~g~Py~~~idp~~tLeT~G~~d~~g~l~~~~tAHPk~Dp~TGel~~f~y~~~~~p~~ 246 (529)
T 3npe_A 167 SAGTGVANAGLVYFNGRLLAMSEDDLPYHVRVADDGDLETVGRYDFDGQLGCAMIAHPKLDPATGELHALSYDVIKRPYL 246 (529)
T ss_dssp GGCCCCCCSCEEEETTEEEECCTTSCCEEEEECTTSCEEEEEECCGGGCCCSCCCSCCEECTTTCCEEEEECCSSSSCCC
T ss_pred cccCCCCeEEEEEECCEEEEEEcCCCceEEecCCCCCcceeeeeccCCccCCcccccCcCCCCCCcEEEEEeecCCCCcE
Confidence 135677775 7899987 789999999867999999999999999999999999999999999999986 5999
Q ss_pred EEEEEcCCCCccceeecccCCCCceeeeeecCCcEEEEEecccccChHHHHhCCCCCeeeCCCCCeEEEEEeCCCCCCCc
Q 044599 257 TYFRFDANGKKQPNVPIFSMTRPSFLHDFAITKKYAVFVDIQIGMNPMEMIFGGGSPVGADPAKVCRIGIIPRYATDESQ 336 (542)
Q Consensus 257 ~~~~~~~~G~~~~~v~i~~~~~p~~iHDfaiTeny~Vf~~~pl~~~~~~~l~~g~~~~~~d~~~~tr~~VipR~~~~~~~ 336 (542)
+||++|++|++.+.++| +++.|+|||||||||||+||+++|+++|+.+|+ .|++++.|++++++|||||||++++.+.
T Consensus 247 ~~~~~~~~G~~~~~~~i-~~~~p~~~HDFaiTenyvVf~~~Pl~~~~~~~~-~g~~~~~~~p~~~tr~~VipR~~~~~~~ 324 (529)
T 3npe_A 247 KYFYFRPDGTKSDDVEI-PLEQPTMIHDFAITENLVVVPDHQVVFKLQEML-RGGSPVVLDAAKTSRFGVLPKHAADASE 324 (529)
T ss_dssp EEEEECTTCCBCCCEEC-CCSSCBCCCCCEECSSEEEEEECSEEECGGGGT-TTCCSEEECTTSCCEEEEEETTCSSGGG
T ss_pred EEEEECCCCCEEEEEEE-eCCCCceEeeEEecCCeEEEEeCCeEEcHHHHh-CCCCceEECCCCCcEEEEEECCCCCCCc
Confidence 99999999999888887 899999999999999999999999999999998 6789999999999999999999876678
Q ss_pred eEEeecCCeeEeeecccccCCCCCEEEEEeecCCCccccccc-cccccceEEEEEEeCCCCcEEEEEcc----CCCCcCc
Q 044599 337 MRWFEVPGFNIIHAINAWDEEDGNAVVMVAPNILSVEHTLDR-TDLVHALVEKVRIDLRTGIVTRRPMS----ARNLDFG 411 (542)
Q Consensus 337 v~w~e~p~~f~fH~~NA~Ee~dg~~Ivl~~~~~~~~~~~~~~-~~~~~~~L~r~ridl~tg~v~~~~L~----~~~~EfP 411 (542)
|+||++|+||+||++|||||+++++||++.||+.+.+.+++. .+.+.++|+|||||+++|+++++.|. +.++|||
T Consensus 325 vrw~e~~~~f~fH~~NA~Ee~~~~~ivv~~~~~~~~~~~~~~~~~~~~~~l~r~rl~l~~g~~~~~~l~~~~~~~~~EfP 404 (529)
T 3npe_A 325 MAWVDVPDCFCFHLWNAWEDEATGEVVVIGSCMTPADSIFNESDERLESVLTEIRLDARTGRSTRRAVLPPSQQVNLEVG 404 (529)
T ss_dssp CEEEECTTCEEEEEEEEEEETTTTEEEEEEEEECCCCCSCCSSSSCCCCEEEEEEECTTTCCEEEEESSCSSSCCCEEEE
T ss_pred eEEEEcCCEEEEEecccEecCCCCeEEEEEecccCchhhhhccchhhccceEEEEEcCCCCCEEeEEecccccCccccCc
Confidence 999999999999999999987555888888887666665543 24567899999999999999999887 4889999
Q ss_pred ccCccCCCCCCcEEEEeeCCCCCCcccEEEeeccCCCcccceeEEEEEcCCCccCCCcEEeecCCC---CCCCCCCCcEE
Q 044599 412 VINPAYMAKKSRYVYAAVGDPMPKISGVVKLDVSKGDERRDCIVATRIFGPGCYGGEPFFVARDPE---NPETEEDDGYV 488 (542)
Q Consensus 412 ~In~~~~Gr~~Ry~Y~~~~~~~~~~~gi~K~Dl~tg~~~~~~~~~~~~~~~g~~~gEPiFVPr~~~---~~~~~EDDG~L 488 (542)
+||++|+||+|||+|+++.++++++++|+|+|++||+ +..||+|++||+|||+||||+++ + .+||||||
T Consensus 405 ~In~~~~Gr~~Ry~Y~~~~~~~~~~~~l~K~D~~tg~------~~~~~~g~~~~~~EPvFVPrp~~~~~~--~~EDDG~l 476 (529)
T 3npe_A 405 MVNRNLLGRETRYAYLAVAEPWPKVSGFAKVDLSTGE------LTKFEYGEGRFGGEPCFVPMDPAAAHP--RGEDDGYV 476 (529)
T ss_dssp EECGGGTTSCCSEEEEEECCSTTSCCEEEEEETTTCC------EEEEECCTTBCCCCCEEEECCSCSSSS--CCTTCEEE
T ss_pred eEChhHcCCccceEEEeccCCCCCcceEEEEecCCCc------eEEEEcCCCccccCCEeeeCCCCCCCC--CCCCCcEE
Confidence 9999999999999999988877889999999999994 67899999999999999999831 5 78999999
Q ss_pred EEEEEcCCCCeeEEEEEeCCCCCCCeeEEEEcCCcCCCCccccccccchhhccC
Q 044599 489 VSYVHDENTGESKFLVMDAKSPRLDIVAAVKLPRRVPYGFHGLFVRQADLDKLL 542 (542)
Q Consensus 489 ls~V~d~~~~~S~l~IlDA~~~~~~pVArv~LP~rvP~GFHG~fv~~~~l~~~~ 542 (542)
|++|||+.+++|+|+||||++ +++|||++||+||||||||+|+++++|++|+
T Consensus 477 Ls~V~d~~~~~S~LlILDA~~--l~~vArv~LP~rvP~GfHG~wv~~~~l~~q~ 528 (529)
T 3npe_A 477 LTFVHDERAGTSELLVVNAAD--MRLEATVQLPSRVPFGFHGTFITGQELEAQA 528 (529)
T ss_dssp EEEEEBSSCCCEEEEEEETTT--TEEEEEEEESSCCCCCSCEEEEEHHHHTTCC
T ss_pred EEEEEECCCCcEEEEEEeCCC--CccceEEECCCCCCCCccccccCHHHhhhhh
Confidence 999999999999999999999 6789999999999999999999999999985
No 2
>2biw_A Apocarotenoid-cleaving oxygenase; non-heme iron, carotenoid cleavage, retinal forma oxidoreductase, dioxygenase; HET: 3ON; 2.39A {Synechocystis SP} PDB: 2bix_A*
Probab=100.00 E-value=5.3e-112 Score=923.14 Aligned_cols=429 Identities=28% Similarity=0.484 Sum_probs=378.1
Q ss_pred ccCCCccc-ccCCCCccceeeccCCCCCcceEEeecCCCCCCC-CCCccCcCCCcceEEEEe-ecCceeEEEEeecchhh
Q 044599 88 LSDNFAPV-DELPPTECEVVQGSLPSCLDGAYIRNGPNPQYLP-RGPYHLFDGDGMLHSIKI-SRGRATLCSRYVRTYKY 164 (542)
Q Consensus 88 l~gnfapv-~E~~~~~~~~V~G~IP~~L~Gt~~RNGP~p~~~~-~~~~HwFDGdGmlh~~~f-~~G~v~y~sRyV~T~~~ 164 (542)
++++|+|+ +|..+ .+..|+|+||+||+|+|||||||+++.+ ...+||||||||||+|+| ++|+|+|+||||||++|
T Consensus 20 ~~~~f~~~~~E~~~-~l~~V~G~IP~~L~Gt~~RnGP~~~~~~~~~~~H~FDGdGmlh~~~f~~~G~v~y~~R~v~T~~~ 98 (490)
T 2biw_A 20 WLRGYQSQPQEWDY-WVEDVEGSIPPDLQGTLYRNGPGLLEIGDRPLKHPFDGDGMVTAFKFPGDGRVHFQSKFVRTQGY 98 (490)
T ss_dssp HHHTTSCCCSCEEE-ECCCEEECCCTTCCEEEEECCBCCSEETTEECSSGGGSCBEEEEEEECSSSCCEEEEEECCCHHH
T ss_pred hhhhccCccccCCc-ccceEEeCCCCCCCeEEEEeCCCcCcCCCCcccCccCCCCeEEEEEECCCCEEEEEcceEeCHHH
Confidence 58899999 67754 4445999999999999999999998764 356899999999999999 99999999999999999
Q ss_pred HHhhhcCCCCCcccccCCCC---------C-CcCccchhh--hHhHHhc----cCCEEeecCCCCCcceeecccCCCcc-
Q 044599 165 TIENEAGSPILPNVFSGFNG---------L-TASAARGAL--SAARLLA----DLPYAIRLTPNGDIETIGRHDFDGKL- 227 (542)
Q Consensus 165 ~~E~~~g~~~f~~~~s~~~~---------~-~~~~an~~~--~~~rlla----~~Py~i~i~p~~tLeT~G~~d~~g~l- 227 (542)
++|+++|+++|+++|+...+ . .++.||+++ +.+|+|| +.||+||+ +||||+|++||+|+|
T Consensus 99 ~~e~~ag~~~~~~~fg~~~~~~~~~~~~~~~~~~~aNT~v~~~~g~llAl~E~~~p~~ldp---~tLeT~G~~d~~g~l~ 175 (490)
T 2biw_A 99 VEEQKAGKMIYRGVFGSQPAGGWLKTIFDLRLKNIANTNITYWGDRLLALWEGGQPHRLEP---SNLATIGLDDLGGILA 175 (490)
T ss_dssp HHHHHHTSCCSBCTTSCCCSSTHHHHTTCCCBCCCCCSEEEEETTEEEEECTTSCCEEECT---TTCCEEEECCTTTTSC
T ss_pred HHHHHhCCcccccccccCCCCchhhhhcccccCCCCEEEEEEECCEEEEEEcCCCCEeccc---ccccEeeeeccCCccc
Confidence 99999999999886655332 1 257788775 6789987 89999885 399999999999999
Q ss_pred c-ccccCCCccCCC------CCcEEEEEEcCCCC-cEEEEEEcCCCCccceeecccCCCCceeeeeecCCcEEEEEeccc
Q 044599 228 A-MSMTAHPKLDSD------TGEAFAFRYGPVPP-FLTYFRFDANGKKQPNVPIFSMTRPSFLHDFAITKKYAVFVDIQI 299 (542)
Q Consensus 228 ~-~~ftAHPk~Dp~------tGel~~f~~~~~~p-~~~~~~~~~~G~~~~~v~i~~~~~p~~iHDfaiTeny~Vf~~~pl 299 (542)
. ..||||||+||+ ||||++|+|+..++ .++||++|++|++.+.+.+ +++.|+|||||||||||+||+++|+
T Consensus 176 ~~~~~tAHPk~Dp~~~~~~gtgel~~fg~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~HDfaiTeny~V~~~~P~ 254 (490)
T 2biw_A 176 EGQPLSAHPRIDPASTFDGGQPCYVTFSIKSSLSSTLTLLELDPQGKLLRQKTE-TFPGFAFIHDFAITPHYAIFLQNNV 254 (490)
T ss_dssp TTCCCCSCCEEESSCTTTTTCCEEEEEEEEESSEEEEEEEEECTTSCEEEEEEE-EEESCCCCCCCEECSSEEEEEECCE
T ss_pred CCcccccCceECccccccCCCCeEEEEEecCCCCcEEEEEEECCCCCEEeeEEE-eCCCCceEeeeeccCCEEEEEeCCe
Confidence 5 489999999999 99999999998754 4999999999999888776 8899999999999999999999999
Q ss_pred ccChHHHHhCC---CCCeeeCCCCCeEEEEEeCCCCCCCceEEeecCCeeEeeecccccCCCCCEEEEEeecCCCccc--
Q 044599 300 GMNPMEMIFGG---GSPVGADPAKVCRIGIIPRYATDESQMRWFEVPGFNIIHAINAWDEEDGNAVVMVAPNILSVEH-- 374 (542)
Q Consensus 300 ~~~~~~~l~~g---~~~~~~d~~~~tr~~VipR~~~~~~~v~w~e~p~~f~fH~~NA~Ee~dg~~Ivl~~~~~~~~~~-- 374 (542)
++|+.+|++++ +.++.|+|++++|||||||+ + +.++||++|+||+||++|||||++ +||++.|++.+.+.
T Consensus 255 ~~~~~~~~~g~~~~~~~~~~~p~~~tr~~VipR~-~--~~v~~f~~~~~f~fH~~NA~Ee~~--~Iv~d~~~~~~~~~~~ 329 (490)
T 2biw_A 255 TLNGLPYLFGLRGAGECVQFHPDKPAQIILVPRD-G--GEIKRIPVQAGFVFHHANAFEENG--KIILDSICYNSLPQVD 329 (490)
T ss_dssp EECCHHHHTTSSCGGGGEEECTTSCEEEEEEETT-S--CCCEEEEECCCEEEEEEEEEEETT--EEEEEEEEESCCCCCC
T ss_pred EEcHHHHhhccCCccceeEeCCCCCcEEEEEECC-C--CccEEEecCCCeEEecccceecCC--eEEEEEeccCCccccc
Confidence 99999998543 35799999999999999998 3 468999999999999999999854 89999886544321
Q ss_pred -c--ccc---cccccceEEEEEEeCCCCcEEEEEccCCCCcCcccCccCCCCCCcEEEEeeCC---CCCCcccEEEeecc
Q 044599 375 -T--LDR---TDLVHALVEKVRIDLRTGIVTRRPMSARNLDFGVINPAYMAKKSRYVYAAVGD---PMPKISGVVKLDVS 445 (542)
Q Consensus 375 -~--~~~---~~~~~~~L~r~ridl~tg~v~~~~L~~~~~EfP~In~~~~Gr~~Ry~Y~~~~~---~~~~~~gi~K~Dl~ 445 (542)
. +.. .....++|+|||||+++|+++++.|++.++|||+||++|.||+|||+|+++.+ +++++++|+|+|++
T Consensus 330 ~~~~~~~~~~~~~~~~~l~R~~i~l~~g~v~~~~l~~~~~EfP~In~~~~G~~~Ry~Y~~~~~~~~~~~~~~~l~K~D~~ 409 (490)
T 2biw_A 330 TDGDFRSTNFDNLDPGQLWRFTIDPAAATVEKQLMVSRCCEFPVVHPQQVGRPYRYVYMGAAHHSTGNAPLQAILKVDLE 409 (490)
T ss_dssp TTCCGGGCCGGGSCCCEEEEEEEETTTTEEEEEEEECSCEEEEECCGGGTTSCCSEEEEEECSSSSSCCCCCEEEEEETT
T ss_pred ccccccccccccCCCceEEEEEEECCCCceEEEeccCCcccccccChhhCCceeeeEEEEeecCCCCCCCCCeEEEEECC
Confidence 1 111 12346899999999999999999999999999999999999999999998775 45678999999999
Q ss_pred CCCcccceeEEEEEcCCCccCCCcEEeecCCCCCCCCCCCcEEEEEEEcCCCCeeEEEEEeCCCCCCCeeEEEEcCCcCC
Q 044599 446 KGDERRDCIVATRIFGPGCYGGEPFFVARDPENPETEEDDGYVVSYVHDENTGESKFLVMDAKSPRLDIVAAVKLPRRVP 525 (542)
Q Consensus 446 tg~~~~~~~~~~~~~~~g~~~gEPiFVPr~~~~~~~~EDDG~Lls~V~d~~~~~S~l~IlDA~~~~~~pVArv~LP~rvP 525 (542)
||+ .+.|++|+++|+|||+||||+ ++ .+|||||||++|||+++++|+|+||||++|+.+||||++||+|||
T Consensus 410 tg~------~~~~~~g~g~~~~EPvFVPrp-~~--~~EDDG~ll~~V~d~~~~~S~l~IlDA~~~~~~pvArv~lP~rvP 480 (490)
T 2biw_A 410 SGT------ETLRSFAPHGFAGEPIFVPRP-GG--VAEDDGWLLCLIYKADLHRSELVILDAQDITAPAIATLKLKHHIP 480 (490)
T ss_dssp TTE------EEEEECTTTEECCCCEEEECT-TC--CSTTCEEEEEEEEETTTTEEEEEEEETTCTTSCCSEEEECSSCCC
T ss_pred CCC------EEEEECCCCccccCCEEecCC-CC--CCCCCcEEEEEEEeCCCCceeEEEEccCCCCcCceEEEeCCCcCC
Confidence 993 678999999999999999997 55 789999999999999999999999999999999999999999999
Q ss_pred CCcccccccc
Q 044599 526 YGFHGLFVRQ 535 (542)
Q Consensus 526 ~GFHG~fv~~ 535 (542)
|||||+|+++
T Consensus 481 ~GfHG~wv~~ 490 (490)
T 2biw_A 481 YPLHGSWAQT 490 (490)
T ss_dssp CCCCEEEEEC
T ss_pred CCccccccCC
Confidence 9999999863
No 3
>3kvc_A Retinoid isomerohydrolase; 7-bladed beta-propeller, monotopic membrane protein, sensory transduction, vision, isomerase, non-heme iron protein; 1.90A {Bos taurus} PDB: 3fsn_A 4f2z_A 4f30_A 4f3a_A 4f3d_A
Probab=100.00 E-value=1.8e-105 Score=879.98 Aligned_cols=431 Identities=23% Similarity=0.356 Sum_probs=345.9
Q ss_pred cccCCCcccccCCCCccceeeccCCCCCcceEEeecCCCCCCCC-CCccCcCCCcceEEEEeecCceeEEEEeecchhhH
Q 044599 87 VLSDNFAPVDELPPTECEVVQGSLPSCLDGAYIRNGPNPQYLPR-GPYHLFDGDGMLHSIKISRGRATLCSRYVRTYKYT 165 (542)
Q Consensus 87 ~l~gnfapv~E~~~~~~~~V~G~IP~~L~Gt~~RNGP~p~~~~~-~~~HwFDGdGmlh~~~f~~G~v~y~sRyV~T~~~~ 165 (542)
-++.+|+|++|.++...+.|+|+||+||+|+|||||||+++.+. ..+||||||||||+|+|++|+|+|+||||||++|+
T Consensus 11 ~~~~~f~~~~E~~~p~~l~V~G~IP~~L~Gtl~RNGPg~~~~g~~~~~HwFDGdGmlh~~~~~~G~v~y~~R~v~T~~~~ 90 (533)
T 3kvc_A 11 GYKKLFETVEELSSPLTAHVTGRIPLWLTGSLLRCGPGLFEVGSEPFYHLFDGQALLHKFDFKEGHVTYHRRFIRTDAYV 90 (533)
T ss_dssp GGGGGGSCCCCCSSCEECEEEECCCTTCCEEEEEEEECCCEETTEECCBTTTSCEEEEEEEEETTEEEEEEEECCCHHHH
T ss_pred hhhhhcCcccccCCceeeeEEeeCCCCCceEEEEeCCCccccCCcccccccCCCCEEEEEEEeCCEEEEEEEEecCHHHH
Confidence 36789999988875555789999999999999999999986543 46899999999999999999999999999999999
Q ss_pred HhhhcCCCCCccccc------------C----CCC-CCcCccchhh--hHhHHhc--cCCEEeecCCCCCcceeecccCC
Q 044599 166 IENEAGSPILPNVFS------------G----FNG-LTASAARGAL--SAARLLA--DLPYAIRLTPNGDIETIGRHDFD 224 (542)
Q Consensus 166 ~E~~~g~~~f~~~~s------------~----~~~-~~~~~an~~~--~~~rlla--~~Py~i~i~p~~tLeT~G~~d~~ 224 (542)
+|+++|+++|+.+.. . +.+ ...+.||+++ +.+|+|| +.++..++||+ ||||+|++||+
T Consensus 91 ~e~~agr~~~~~fg~~~~~~p~~~~~~~~~~~~~~~~~~~~ANt~v~~~~g~LlAl~E~~~p~~iDp~-tLeT~G~~d~~ 169 (533)
T 3kvc_A 91 RAMTEKRIVITEFGTCAFPDPCKNIFSRFFSYFRGVEVTDNALVNIYPVGEDYYACTETNFITKVNPE-TLETIKQVDLC 169 (533)
T ss_dssp HHHHHTSCCSCBTTBCC-------------------CCCCCCCSEEEEETTEEEEECSSSEEEEECTT-TCCEEEEEEHH
T ss_pred HHHHcCCcceeccCcccCCcchhhHHHHHHHhhccCCCCCCCEEEEEEECCEEEEEEcCCcCEEeChH-HcccccccccC
Confidence 999999998754211 1 111 1246777775 6789887 44444445565 99999999999
Q ss_pred Cccc-ccccCCCccCCCCCcEEEEEEcCCC---CcEEEEEEcCCCC-----ccc-e----eecccCCCCceeeeeecCCc
Q 044599 225 GKLA-MSMTAHPKLDSDTGEAFAFRYGPVP---PFLTYFRFDANGK-----KQP-N----VPIFSMTRPSFLHDFAITKK 290 (542)
Q Consensus 225 g~l~-~~ftAHPk~Dp~tGel~~f~~~~~~---p~~~~~~~~~~G~-----~~~-~----v~i~~~~~p~~iHDfaiTen 290 (542)
|+|. ..||||||+|| |||||+|+|+..+ +.|.+|++++++. +.+ + ++...++.|+||||||||||
T Consensus 170 g~l~~~~~tAHPk~Dp-tGel~~fg~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~v~~~i~~~~~~~p~~iHDFaiTen 248 (533)
T 3kvc_A 170 NYVSVNGATAHPHIEN-DGTVYNIGNCFGKNFSIAYNIVKIPPLQADKEDPISKSEIVVQFPCSDRFKPSYVHSFGLTPN 248 (533)
T ss_dssp HHSSCSCCCSCCEECT-TSCEEEEEEECC---CCEEEEEEECCCCTTCCCGGGGCEEEEEEECSSTTCCBCCCCCEECSS
T ss_pred CccCCCccCCCCccCC-CCCEEEEeeccCCCCCcEEEEEEECccccccccccccceeEEeeccccCCCCceeeeeeecCC
Confidence 9997 57999999999 9999999998863 6789999986531 211 1 22223568999999999999
Q ss_pred EEEEEecccccChHHHHhC----CCC---CeeeCCCCCeEEEEEeCCCCCCCceEEeecCCeeEeeecccccCCCCCEEE
Q 044599 291 YAVFVDIQIGMNPMEMIFG----GGS---PVGADPAKVCRIGIIPRYATDESQMRWFEVPGFNIIHAINAWDEEDGNAVV 363 (542)
Q Consensus 291 y~Vf~~~pl~~~~~~~l~~----g~~---~~~~d~~~~tr~~VipR~~~~~~~v~w~e~p~~f~fH~~NA~Ee~dg~~Iv 363 (542)
|+||+++|+++|+.+|+.+ +.+ ++.|||++++|||||||++++ ..++||++++||+||++|||||++ +||
T Consensus 249 y~Vf~~~P~~~~~~~~~~g~~~~~~~~~~~~~~~p~~~tr~~VipR~~~~-~~~~~~~~~~~f~fH~~NA~Ee~~--~Iv 325 (533)
T 3kvc_A 249 YIVFVETPVKINLFKFLSSWSLWGANYMDCFESNETMGVWLHIADKKRKK-YINNKYRTSPFNLFHHINTYEDHE--FLI 325 (533)
T ss_dssp EEEEEECSEEEC-----------CCCSGGGEEECSSCCEEEEEEETTTTE-EEEEEEEECCEEEEEEEEEEEETT--EEE
T ss_pred EEEEEeCCeEEcHHHHhhcccccCCChHHheeecCCCCcEEEEEECCCCC-cccEEEEeCCeeEEeeeeeEEeCC--EEE
Confidence 9999999999999999854 333 689999999999999999764 235789999999999999999864 899
Q ss_pred EEeecCCC-c--------ccccccc--------ccccceEEEEEEeCCCC------------------------c--EEE
Q 044599 364 MVAPNILS-V--------EHTLDRT--------DLVHALVEKVRIDLRTG------------------------I--VTR 400 (542)
Q Consensus 364 l~~~~~~~-~--------~~~~~~~--------~~~~~~L~r~ridl~tg------------------------~--v~~ 400 (542)
++.|++.+ . +++.+.. ....++|+|||||++++ + ++.
T Consensus 326 ~d~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~R~~l~l~~~~~~~~~nl~~~~~~~~~a~~~~~~~~~~~~ 405 (533)
T 3kvc_A 326 VDLCCWKGFEFVYNYLYLANLRENWEEVKKNARKAPQPEVRRYVLPLNIDKADTGKNLVTLPNTTATAILCSDETIWLEP 405 (533)
T ss_dssp EEEEEEESSSCGGGGCBHHHHTSCHHHHHHHHTTSCEEEEEEEEEESCCCGGGTTSBCCCCTTCCCEEEECTTSEEEEEC
T ss_pred EEEeeeCCchhhhhhhhhhhhcccchhccccccccCCceEEEEEEeCCcccccccccccccccccceeeeccCCceeeee
Confidence 98876543 1 1121110 13567899999999875 2 445
Q ss_pred EEccC--C-CCcCcccCc-cCCCCCCcEEEEeeCCCCCCcccEEEeeccCCCcccceeEEEEEcCCCccCCCcEEeecCC
Q 044599 401 RPMSA--R-NLDFGVINP-AYMAKKSRYVYAAVGDPMPKISGVVKLDVSKGDERRDCIVATRIFGPGCYGGEPFFVARDP 476 (542)
Q Consensus 401 ~~L~~--~-~~EfP~In~-~~~Gr~~Ry~Y~~~~~~~~~~~gi~K~Dl~tg~~~~~~~~~~~~~~~g~~~gEPiFVPr~~ 476 (542)
+.|++ . ++|||+||+ +|.||+|||+|+++.+ .+.+++|+|+|++||+ . ..|+++++|+||||||||+
T Consensus 406 ~~l~~~~~~~~EfP~In~~~~~Gr~~Ry~Y~~~~~-~~~~~~l~K~D~~tg~------~-~~w~~~~~~~~EPiFVPrp- 476 (533)
T 3kvc_A 406 EVLFSGPRQAFEFPQINYQKYGGKPYTYAYGLGLN-HFVPDRLCKLNVKTKE------T-WVWQEPDSYPSEPIFVSHP- 476 (533)
T ss_dssp EEEECBTTEEEEEEECCHHHHTTSCCCEEEEEEEE-TTEEEEEEEEETTTCC------E-EEECCTTCBCCCCEEEECT-
T ss_pred eeeccCCcccccCceECHHHhCCCcccEEEEeccC-CCCCceeEEEEcCCCC------E-EEEeCCCccccCceeecCC-
Confidence 67774 6 899999999 7999999999998765 3678999999999993 3 3567999999999999997
Q ss_pred CCCCCCCCCcEEEEEEEcCCC--CeeEEEEEeCCCCCCCeeEEEEcCCcCCCCcccccccc
Q 044599 477 ENPETEEDDGYVVSYVHDENT--GESKFLVMDAKSPRLDIVAAVKLPRRVPYGFHGLFVRQ 535 (542)
Q Consensus 477 ~~~~~~EDDG~Lls~V~d~~~--~~S~l~IlDA~~~~~~pVArv~LP~rvP~GFHG~fv~~ 535 (542)
++ .+|||||||++|||+.+ ++|+|+||||++ +++||||+||+||||||||+|+++
T Consensus 477 ~~--~~EDDG~lLs~V~d~~~~~~~s~LlILDA~~--l~~vArv~lP~rvP~GfHG~w~~~ 533 (533)
T 3kvc_A 477 DA--LEEDDGVVLSVVVSPGAGQKPAYLLILNAKD--LSEVARAEVEINIPVTFHGLFKKS 533 (533)
T ss_dssp TC--CSTTCEEEEEEEECCSTTSCSEEEEEEETTT--CCEEEEEEESSCCCCCCEEEEEEC
T ss_pred CC--CCCCCcEEEEEEEeCCcCCCccEEEEEeCCC--ChhhEEEEeCCCCCCCccccccCC
Confidence 55 79999999999999986 567999999999 568999999999999999999874
No 4
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=48.73 E-value=2.1e+02 Score=30.74 Aligned_cols=103 Identities=17% Similarity=0.196 Sum_probs=59.0
Q ss_pred EEEeCCCCcEEEEEccCCCCcCcccCccCCCCCCcEEEEeeCCCCCCcccEEEeecc--CCCcccceeEEEEEcCCCccC
Q 044599 389 VRIDLRTGIVTRRPMSARNLDFGVINPAYMAKKSRYVYAAVGDPMPKISGVVKLDVS--KGDERRDCIVATRIFGPGCYG 466 (542)
Q Consensus 389 ~ridl~tg~v~~~~L~~~~~EfP~In~~~~Gr~~Ry~Y~~~~~~~~~~~gi~K~Dl~--tg~~~~~~~~~~~~~~~g~~~ 466 (542)
..||+.|+++..+.-.........+.+ ..||+|.+..+ +.|..+|+. +++. +....- +
T Consensus 180 ~viD~~t~~v~~~i~~g~~p~~v~~Sp-----DGr~lyv~~~d-----g~V~viD~~~~t~~~-----v~~i~~-----G 239 (567)
T 1qks_A 180 ALIDGSTYEIKTVLDTGYAVHISRLSA-----SGRYLFVIGRD-----GKVNMIDLWMKEPTT-----VAEIKI-----G 239 (567)
T ss_dssp EEEETTTCCEEEEEECSSCEEEEEECT-----TSCEEEEEETT-----SEEEEEETTSSSCCE-----EEEEEC-----C
T ss_pred EEEECCCCeEEEEEeCCCCccceEECC-----CCCEEEEEcCC-----CeEEEEECCCCCCcE-----eEEEec-----C
Confidence 346777777665432222222223333 45899976432 479999996 5521 222222 3
Q ss_pred CCcEEeecCCCCCCCC-CCCcEEEEEEEcCCCCeeEEEEEeCCCCCCCeeEEEEcC
Q 044599 467 GEPFFVARDPENPETE-EDDGYVVSYVHDENTGESKFLVMDAKSPRLDIVAAVKLP 521 (542)
Q Consensus 467 gEPiFVPr~~~~~~~~-EDDG~Lls~V~d~~~~~S~l~IlDA~~~~~~pVArv~LP 521 (542)
.+|.-+.=.+ -. -|..||++.-++. ..+.|+|+.+ ++++.++.+.
T Consensus 240 ~~P~~ia~s~----~~~pDGk~l~v~n~~~----~~v~ViD~~t--~~~~~~i~~~ 285 (567)
T 1qks_A 240 SEARSIETSK----MEGWEDKYAIAGAYWP----PQYVIMDGET--LEPKKIQSTR 285 (567)
T ss_dssp SEEEEEEECC----STTCTTTEEEEEEEET----TEEEEEETTT--CCEEEEEECC
T ss_pred CCCceeEEcc----ccCCCCCEEEEEEccC----CeEEEEECCC--CcEEEEEecc
Confidence 3455444320 00 1445887766543 5688999999 8899988864
No 5
>4guc_A Protein BA_2500; virulence, pathogenesis, vaccine candidate, center for struc genomics of infectious diseases, csgid, niaid; HET: PGE; 1.40A {Bacillus anthracis}
Probab=34.43 E-value=86 Score=27.03 Aligned_cols=46 Identities=11% Similarity=0.225 Sum_probs=33.3
Q ss_pred CCCcEEEEEEcCC---CCcEEEEEEc----CCCCccceeecccCCCCceeeeeecCCcEEEE
Q 044599 240 DTGEAFAFRYGPV---PPFLTYFRFD----ANGKKQPNVPIFSMTRPSFLHDFAITKKYAVF 294 (542)
Q Consensus 240 ~tGel~~f~~~~~---~p~~~~~~~~----~~G~~~~~v~i~~~~~p~~iHDfaiTeny~Vf 294 (542)
.||..|.+..... ...+++|+++ ++|.+++- .-|||+..+++|.+|
T Consensus 35 ktGdtf~it~~~~~~d~g~~KIyrv~~~~~~~g~L~RY---------kTI~d~~~~~~~~~f 87 (120)
T 4guc_A 35 KHGDTFDVTIYTGGKDTGIVKIYQLSGNENDEINLHRY---------KTIYDSGLKHNYGRF 87 (120)
T ss_dssp ETTCEEEEEEECCSSBCCEEEEEEECSCTTCSCCEEEE---------EEEECCCCCTTEEEE
T ss_pred ccCCEEEEEEEcCCCccceEEEEEEccCCCCCcceEEE---------EEeccCCCcCCeeEE
Confidence 4788888776553 2469999997 45665442 356899999998877
No 6
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=34.30 E-value=1.8e+02 Score=28.07 Aligned_cols=74 Identities=12% Similarity=0.133 Sum_probs=41.6
Q ss_pred cEEEEeeCCCCCCcccEEEeeccCCCcccceeEEEEEcCCCccCCCcEEeecCCCCCCCCCCCcEEEEEEEcCCCCeeEE
Q 044599 423 RYVYAAVGDPMPKISGVVKLDVSKGDERRDCIVATRIFGPGCYGGEPFFVARDPENPETEEDDGYVVSYVHDENTGESKF 502 (542)
Q Consensus 423 Ry~Y~~~~~~~~~~~gi~K~Dl~tg~~~~~~~~~~~~~~~g~~~gEPiFVPr~~~~~~~~EDDG~Lls~V~d~~~~~S~l 502 (542)
...|.+.+.. .-+.|.++|+.|++. ......+.+.|+ |- +.+. ++.| ++.+. ....+
T Consensus 32 g~Lyvstg~~--~~s~v~~iD~~tg~v-----~~~i~l~~~~fg-eG-i~~~----------g~~l--yv~t~--~~~~v 88 (266)
T 2iwa_A 32 DTLFESTGLY--GRSSVRQVALQTGKV-----ENIHKMDDSYFG-EG-LTLL----------NEKL--YQVVW--LKNIG 88 (266)
T ss_dssp TEEEEEECST--TTCEEEEEETTTCCE-----EEEEECCTTCCE-EE-EEEE----------TTEE--EEEET--TCSEE
T ss_pred CeEEEECCCC--CCCEEEEEECCCCCE-----EEEEecCCCcce-EE-EEEe----------CCEE--EEEEe--cCCEE
Confidence 3788765421 236899999999952 334444443332 11 2222 1111 22232 33567
Q ss_pred EEEeCCCCCCCeeEEEEcC
Q 044599 503 LVMDAKSPRLDIVAAVKLP 521 (542)
Q Consensus 503 ~IlDA~~~~~~pVArv~LP 521 (542)
.|+|+++ ++.++++..+
T Consensus 89 ~viD~~t--~~v~~~i~~g 105 (266)
T 2iwa_A 89 FIYDRRT--LSNIKNFTHQ 105 (266)
T ss_dssp EEEETTT--TEEEEEEECC
T ss_pred EEEECCC--CcEEEEEECC
Confidence 8888887 7788887766
No 7
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=26.13 E-value=1.6e+02 Score=28.21 Aligned_cols=24 Identities=29% Similarity=0.494 Sum_probs=16.8
Q ss_pred cEEEEeeCCCCCCcccEEEeeccCCC
Q 044599 423 RYVYAAVGDPMPKISGVVKLDVSKGD 448 (542)
Q Consensus 423 Ry~Y~~~~~~~~~~~gi~K~Dl~tg~ 448 (542)
...|...+.- .-+.|.++|++||+
T Consensus 31 ~~LyestG~~--g~S~v~~vD~~tgk 54 (243)
T 3mbr_X 31 GHLYESTGET--GRSSVRKVDLETGR 54 (243)
T ss_dssp TEEEEEECCT--TSCEEEEEETTTCC
T ss_pred CEEEEECCCC--CCceEEEEECCCCC
Confidence 4677765431 23689999999995
No 8
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=23.67 E-value=5.7e+02 Score=27.70 Aligned_cols=69 Identities=16% Similarity=0.149 Sum_probs=42.2
Q ss_pred ccEEEeeccCCCcccceeEEEEEcCCC-----ccCCCcEEeecCCCCCCCCCCCcEEEEEEEcCCCCeeEEEEEeCCCCC
Q 044599 437 SGVVKLDVSKGDERRDCIVATRIFGPG-----CYGGEPFFVARDPENPETEEDDGYVVSYVHDENTGESKFLVMDAKSPR 511 (542)
Q Consensus 437 ~gi~K~Dl~tg~~~~~~~~~~~~~~~g-----~~~gEPiFVPr~~~~~~~~EDDG~Lls~V~d~~~~~S~l~IlDA~~~~ 511 (542)
++|+-+|.+||+. .|.+...++ ...++|+++... -||=..-+++-. +....|.+||+++
T Consensus 283 ~sv~AlD~~TG~~-----~W~~~~~~~d~wd~~~~~~p~l~~~~--------~dG~~~~~l~~~-~~~G~l~~lD~~t-- 346 (677)
T 1kb0_A 283 ASIVALDPDTGKY-----KWHYQETPGDNWDYTSTQPMILADIK--------IAGKPRKVILHA-PKNGFFFVLDRTN-- 346 (677)
T ss_dssp TEEEEECTTTCCE-----EEEEESSTTCCSCCCCCSCCEEEEEE--------ETTEEEEEEEEC-CTTSEEEEEETTT--
T ss_pred EEEEEEECCCCCE-----EEEEecCCCcccccccCCCcEEEecc--------cCCcEeeEEEEE-CCCCEEEEEECCC--
Confidence 4699999999953 555555433 246788888642 123111111111 2345899999998
Q ss_pred CCeeEEEEcC
Q 044599 512 LDIVAAVKLP 521 (542)
Q Consensus 512 ~~pVArv~LP 521 (542)
-+++.++.+.
T Consensus 347 G~~l~~~~~~ 356 (677)
T 1kb0_A 347 GKFISAKNFV 356 (677)
T ss_dssp CCEEEEEESS
T ss_pred CCEecccccc
Confidence 7788888764
No 9
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=23.58 E-value=1.1e+02 Score=29.86 Aligned_cols=23 Identities=30% Similarity=0.564 Sum_probs=15.6
Q ss_pred EEEEeeCCCCCCcccEEEeeccCCC
Q 044599 424 YVYAAVGDPMPKISGVVKLDVSKGD 448 (542)
Q Consensus 424 y~Y~~~~~~~~~~~gi~K~Dl~tg~ 448 (542)
..|.+.+.- .-+.|.++|++|++
T Consensus 54 ~LyestG~~--g~S~v~~vD~~Tgk 76 (262)
T 3nol_A 54 YFYESTGLN--GRSSIRKVDIESGK 76 (262)
T ss_dssp EEEEEEEET--TEEEEEEECTTTCC
T ss_pred EEEEECCCC--CCceEEEEECCCCc
Confidence 577665421 12579999999995
No 10
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=22.70 E-value=3.2e+02 Score=28.18 Aligned_cols=80 Identities=21% Similarity=0.195 Sum_probs=45.6
Q ss_pred CcEEEEeeCCCCCCcccEEEeeccCCCcccceeEEEEEcCCCccCCCcEEeecCCCCCCCCCCCcEEEEEEEcCC-----
Q 044599 422 SRYVYAAVGDPMPKISGVVKLDVSKGDERRDCIVATRIFGPGCYGGEPFFVARDPENPETEEDDGYVVSYVHDEN----- 496 (542)
Q Consensus 422 ~Ry~Y~~~~~~~~~~~gi~K~Dl~tg~~~~~~~~~~~~~~~g~~~gEPiFVPr~~~~~~~~EDDG~Lls~V~d~~----- 496 (542)
.+++|.+.......-+.|..+|+.|++. +....-| .+|=++..+ |..+|.+.-....
T Consensus 84 ~~~vyV~n~~~~~~~~~VsVID~~t~~v-----v~~I~vG-----~~Pgia~Sp--------Dgk~lyVan~~~~~~~~G 145 (426)
T 3c75_H 84 ARRVYIQDPAHFAAITQQFVIDGSTGRI-----LGMTDGG-----FLPHPVAAE--------DGSFFAQASTVFERIARG 145 (426)
T ss_dssp TTEEEEEECTTTCSSEEEEEEETTTTEE-----EEEEEEC-----SSCEEEECT--------TSSCEEEEEEEEEETTEE
T ss_pred CCEEEEECCCcCCCCCeEEEEECCCCEE-----EEEEECC-----CCCceEECC--------CCCEEEEEeccccccccC
Confidence 3668876542111017899999999842 3333333 234222222 2234443322100
Q ss_pred CCeeEEEEEeCCCCCCCeeEEEEcC
Q 044599 497 TGESKFLVMDAKSPRLDIVAAVKLP 521 (542)
Q Consensus 497 ~~~S~l~IlDA~~~~~~pVArv~LP 521 (542)
.+...+.|||+++ .+.++++.+|
T Consensus 146 ~~~~~VsviD~~t--~~vv~~I~v~ 168 (426)
T 3c75_H 146 KRTDYVEVFDPVT--FLPIADIELP 168 (426)
T ss_dssp EEEEEEEEECTTT--CCEEEEEEET
T ss_pred CCCCEEEEEECCC--CcEEEEEECC
Confidence 1235789999999 8899999997
No 11
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=20.97 E-value=1.5e+02 Score=32.54 Aligned_cols=82 Identities=12% Similarity=0.036 Sum_probs=46.4
Q ss_pred CcEEEEeeCCCCCCcccEEEeeccCCCcccceeEEEEEcCCCccCCCcEEeecCCCCCCCCCCCcEEEEEE---------
Q 044599 422 SRYVYAAVGDPMPKISGVVKLDVSKGDERRDCIVATRIFGPGCYGGEPFFVARDPENPETEEDDGYVVSYV--------- 492 (542)
Q Consensus 422 ~Ry~Y~~~~~~~~~~~gi~K~Dl~tg~~~~~~~~~~~~~~~g~~~gEPiFVPr~~~~~~~~EDDG~Lls~V--------- 492 (542)
.||+|.+..+ -+.|+.+|+++.+. .+....+.+.-+ +-+.+-+ -.|.+||++.-
T Consensus 101 G~~lfVnd~~----~~rVavIdl~t~~~-----~~ii~ip~g~~p-hg~~~~~-------~p~~~~v~~~~~~~~p~~~d 163 (595)
T 1fwx_A 101 GRFLFMNDKA----NTRVARVRCDVMKC-----DAILEIPNAKGI-HGLRPQK-------WPRSNYVFCNGEDETPLVND 163 (595)
T ss_dssp EEEEEEEETT----TTEEEEEETTTTEE-----EEEEECSSCCSE-EEEEECC-------SSBCSEEEEEECSCEESSCS
T ss_pred CCEEEEEcCC----CCEEEEEECCCceE-----eeEEeCCCCCCC-cceeeee-------cCCCcEEEEecccccccCCC
Confidence 5799986432 15799999999841 121122211110 1111101 02345654442
Q ss_pred ----EcCCCCeeEEEEEeCCCCCCCeeEEEEcCC
Q 044599 493 ----HDENTGESKFLVMDAKSPRLDIVAAVKLPR 522 (542)
Q Consensus 493 ----~d~~~~~S~l~IlDA~~~~~~pVArv~LP~ 522 (542)
.+.+...+-+-++|+.+ ++.++.|.++.
T Consensus 164 g~~l~~~~~~~~~vtvID~~t--~~v~~qI~Vgg 195 (595)
T 1fwx_A 164 GTNMEDVANYVNVFTAVDADK--WEVAWQVLVSG 195 (595)
T ss_dssp SSSTTCGGGEEEEEEEEETTT--TEEEEEEEESS
T ss_pred CcccccccccCceEEEEECCC--CeEEEEEEeCC
Confidence 12335567889999998 89999999964
Done!