BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044600
(104 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|356537085|ref|XP_003537061.1| PREDICTED: uncharacterized protein LOC100780595 [Glycine max]
Length = 206
Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 74/113 (65%), Positives = 86/113 (76%), Gaps = 11/113 (9%)
Query: 1 MARASSTTELAEKIAWHCALFMAIMLVLSCCESSDS---------GGFMGQVTQPRNVNK 51
MA S+T LAEKI+W+C++F+A+MLVLS CES+ S G G ++ N NK
Sbjct: 1 MACGCSSTTLAEKISWNCSVFVALMLVLSSCESNTSDFTSQMMLHGSVTGNISN--NNNK 58
Query: 52 PCDEIYVVREGETLHTISEKCGDPYIVEQNPHINDPDDVFPGLVIKITPFKNR 104
CDEIYVVREGETL TISEKCGDPYIVE+NPHI+DPDDVFPGLVIKI PF NR
Sbjct: 59 ACDEIYVVREGETLQTISEKCGDPYIVEENPHIHDPDDVFPGLVIKINPFTNR 111
>gi|356548405|ref|XP_003542592.1| PREDICTED: uncharacterized protein LOC100786697 [Glycine max]
Length = 108
Score = 147 bits (370), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 74/108 (68%), Positives = 86/108 (79%), Gaps = 5/108 (4%)
Query: 1 MARASSTTELAEKIAWHCALFMAIMLVLSCCESSDSGGFMGQVTQPRNV----NKPCDEI 56
MA S+T +AEKI+W+CA+F+A+MLVLS CES+ S F Q+ +V NK CDEI
Sbjct: 1 MACGCSSTAMAEKISWNCAVFVALMLVLSSCESNTSD-FTTQMMFHESVSNSNNKACDEI 59
Query: 57 YVVREGETLHTISEKCGDPYIVEQNPHINDPDDVFPGLVIKITPFKNR 104
YVVREGETL TISEKCGDPYIVE+NPHI+DPDDVFPGLVIKI PF NR
Sbjct: 60 YVVREGETLQTISEKCGDPYIVEENPHIHDPDDVFPGLVIKINPFTNR 107
>gi|356503801|ref|XP_003520691.1| PREDICTED: uncharacterized protein LOC100794241 [Glycine max]
Length = 99
Score = 141 bits (356), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 72/100 (72%), Positives = 79/100 (79%), Gaps = 6/100 (6%)
Query: 10 LAEKIAWHCALFMAIMLVLSCCESSDSGGFMGQVTQPRNV-----NKPCDEIYVVREGET 64
+AEKI+W C LFMAI+LVLSCCESS + F Q+ RN+ K CDEIYVVREGET
Sbjct: 1 MAEKISWCCVLFMAIILVLSCCESS-TNEFRVQMLMQRNINNNNNKKACDEIYVVREGET 59
Query: 65 LHTISEKCGDPYIVEQNPHINDPDDVFPGLVIKITPFKNR 104
L TISEKCGDPYIVE+NPHI DPDDVFPGLVIKI PF NR
Sbjct: 60 LQTISEKCGDPYIVEENPHIQDPDDVFPGLVIKINPFTNR 99
>gi|225440950|ref|XP_002283136.1| PREDICTED: uncharacterized protein LOC100244252 [Vitis vinifera]
Length = 104
Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/104 (71%), Positives = 86/104 (82%)
Query: 1 MARASSTTELAEKIAWHCALFMAIMLVLSCCESSDSGGFMGQVTQPRNVNKPCDEIYVVR 60
MA SS+TELAEKI+W+ AL +A+MLVLSCCES+ S + ++ KPCDEIYVVR
Sbjct: 1 MAPISSSTELAEKISWYSALLLALMLVLSCCESAQSHDEIMVRLHKKDAKKPCDEIYVVR 60
Query: 61 EGETLHTISEKCGDPYIVEQNPHINDPDDVFPGLVIKITPFKNR 104
EGETLHTISEKCGDPYIVE+NPHI+DPDDVFPGLVIKITP+ R
Sbjct: 61 EGETLHTISEKCGDPYIVEENPHIHDPDDVFPGLVIKITPYNYR 104
>gi|357510995|ref|XP_003625786.1| hypothetical protein MTR_7g104250 [Medicago truncatula]
gi|355500801|gb|AES82004.1| hypothetical protein MTR_7g104250 [Medicago truncatula]
Length = 96
Score = 131 bits (329), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 64/96 (66%), Positives = 76/96 (79%), Gaps = 1/96 (1%)
Query: 10 LAEKIAWHCALFMA-IMLVLSCCESSDSGGFMGQVTQPRNVNKPCDEIYVVREGETLHTI 68
+A +I+ +C LF A I+L+L+CCES S + + N NK CDEIYVVREGETLHTI
Sbjct: 1 MAMRISRYCVLFSAVIILLLNCCESRRSELTVEMKQRIANNNKACDEIYVVREGETLHTI 60
Query: 69 SEKCGDPYIVEQNPHINDPDDVFPGLVIKITPFKNR 104
SEKCGDP+IVE+NPHI+DPDDVFPGLVIKI PF NR
Sbjct: 61 SEKCGDPFIVEENPHIHDPDDVFPGLVIKINPFTNR 96
>gi|224113145|ref|XP_002316406.1| predicted protein [Populus trichocarpa]
gi|222865446|gb|EEF02577.1| predicted protein [Populus trichocarpa]
Length = 108
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/96 (73%), Positives = 82/96 (85%), Gaps = 3/96 (3%)
Query: 10 LAEKIAWHCALFMAIMLVLSCCESSDSGGFMGQVTQPRNV-NKPCDEIYVVREGETLHTI 68
+AEKI+W+CAL MA+MLVLSCCE S++ + V PR NKPCDEIYVVREGETL+TI
Sbjct: 1 MAEKISWYCALLMALMLVLSCCEVSETE--LSTVGHPRFFENKPCDEIYVVREGETLNTI 58
Query: 69 SEKCGDPYIVEQNPHINDPDDVFPGLVIKITPFKNR 104
SEKCGDPYIVE+NPHI+DPDDVFPGLVIKITP +R
Sbjct: 59 SEKCGDPYIVEENPHIHDPDDVFPGLVIKITPLIDR 94
>gi|224127542|ref|XP_002320100.1| predicted protein [Populus trichocarpa]
gi|222860873|gb|EEE98415.1| predicted protein [Populus trichocarpa]
Length = 120
Score = 117 bits (293), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 57/105 (54%), Positives = 78/105 (74%), Gaps = 6/105 (5%)
Query: 6 STTELAEKIAWHCAL-FMAIMLVLSCCESS-----DSGGFMGQVTQPRNVNKPCDEIYVV 59
++T +A+ W+CAL +A++L S E+S D V + +++PCDEIYVV
Sbjct: 12 TSTSIADAATWYCALVLLALILFTSLREASPTYDDDHHHDFVAVKGNQILDRPCDEIYVV 71
Query: 60 REGETLHTISEKCGDPYIVEQNPHINDPDDVFPGLVIKITPFKNR 104
+EGETLHTIS+KCGDP+IVE+NPHI+DPDDV+PGLVIKITP ++R
Sbjct: 72 KEGETLHTISDKCGDPFIVEENPHIHDPDDVYPGLVIKITPSRSR 116
>gi|225469318|ref|XP_002270367.1| PREDICTED: uncharacterized protein LOC100255607 [Vitis vinifera]
Length = 113
Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 72/101 (71%)
Query: 4 ASSTTELAEKIAWHCALFMAIMLVLSCCESSDSGGFMGQVTQPRNVNKPCDEIYVVREGE 63
+ S+ +A+ + +CA+ + +++L+ S V + + +PCDEIYVV EGE
Sbjct: 9 SRSSVAVADAASCYCAVILVALILLASVREYSSLPTDESVKGHQLLARPCDEIYVVGEGE 68
Query: 64 TLHTISEKCGDPYIVEQNPHINDPDDVFPGLVIKITPFKNR 104
TLHTIS+KCGDPYIVEQNPHI+DPDDVFPGLVIKITP K R
Sbjct: 69 TLHTISDKCGDPYIVEQNPHIHDPDDVFPGLVIKITPSKQR 109
>gi|147767756|emb|CAN62985.1| hypothetical protein VITISV_027722 [Vitis vinifera]
Length = 113
Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 71/101 (70%)
Query: 4 ASSTTELAEKIAWHCALFMAIMLVLSCCESSDSGGFMGQVTQPRNVNKPCDEIYVVREGE 63
+ S+ +A+ + +CA+ + +++L S V + + +PCDEIYVV EGE
Sbjct: 9 SRSSVAVADAASCYCAVILVALILLXSVREYSSLPTDESVKGXQLLARPCDEIYVVGEGE 68
Query: 64 TLHTISEKCGDPYIVEQNPHINDPDDVFPGLVIKITPFKNR 104
TLHTIS+KCGDPYIVEQNPHI+DPDDVFPGLVIKITP K R
Sbjct: 69 TLHTISDKCGDPYIVEQNPHIHDPDDVFPGLVIKITPSKQR 109
>gi|356520475|ref|XP_003528887.1| PREDICTED: uncharacterized protein LOC100815990 [Glycine max]
Length = 112
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/96 (55%), Positives = 70/96 (72%), Gaps = 1/96 (1%)
Query: 5 SSTTELAEKIAWHCALFMAIMLVLSCCESSDSGGFMGQVTQPRNVNKPCDEIYVVREGET 64
+S+ +A +W+CA + + +LS + S S Q + +++PC+EIYVV EGET
Sbjct: 14 TSSKAIANAASWYCAFVLVALALLSMFKDS-SMLIPSQYASGQLLSRPCEEIYVVGEGET 72
Query: 65 LHTISEKCGDPYIVEQNPHINDPDDVFPGLVIKITP 100
LHTIS+KCGDP+IVE NPHI+DPDDVFPGLVIKITP
Sbjct: 73 LHTISDKCGDPFIVENNPHIHDPDDVFPGLVIKITP 108
>gi|297820008|ref|XP_002877887.1| peptidoglycan-binding LysM domain-containing protein [Arabidopsis
lyrata subsp. lyrata]
gi|297323725|gb|EFH54146.1| peptidoglycan-binding LysM domain-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 109
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 77/104 (74%), Gaps = 8/104 (7%)
Query: 5 SSTTELAEKIAWHCALFMAIMLVLSCCESSDSGGF-MGQVTQPRNV------NKP-CDEI 56
SS+ +AEKI+W+CA+F A+ML+++ + ++ G + + QP + +P CDEI
Sbjct: 4 SSSMAVAEKISWYCAVFAAMMLLMNSFQVAEEGSTEIVEQQQPSMMITGYSDRRPACDEI 63
Query: 57 YVVREGETLHTISEKCGDPYIVEQNPHINDPDDVFPGLVIKITP 100
Y V+EGETL TISEKCGDPYIVE NPHI+D DD+FPGL+I+ITP
Sbjct: 64 YEVKEGETLQTISEKCGDPYIVEGNPHIHDHDDLFPGLLIRITP 107
>gi|255646878|gb|ACU23909.1| unknown [Glycine max]
Length = 112
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 53/96 (55%), Positives = 70/96 (72%), Gaps = 1/96 (1%)
Query: 5 SSTTELAEKIAWHCALFMAIMLVLSCCESSDSGGFMGQVTQPRNVNKPCDEIYVVREGET 64
+S+ +A +W+CA + + +LS + S S Q + +++PC+EIYVV EGET
Sbjct: 14 TSSKAIANAASWYCAFVLVALALLSMFKDS-SMLIPSQHASGQLLSRPCEEIYVVGEGET 72
Query: 65 LHTISEKCGDPYIVEQNPHINDPDDVFPGLVIKITP 100
LHTIS+KCGDP+IVE NPHI+DPDDVFPGLVIKITP
Sbjct: 73 LHTISDKCGDPFIVENNPHIHDPDDVFPGLVIKITP 108
>gi|15231684|ref|NP_190847.1| peptidoglycan-binding LysM domain-containing protein [Arabidopsis
thaliana]
gi|7669953|emb|CAB89240.1| putative protein [Arabidopsis thaliana]
gi|27808562|gb|AAO24561.1| At3g52790 [Arabidopsis thaliana]
gi|110736294|dbj|BAF00117.1| hypothetical protein [Arabidopsis thaliana]
gi|332645473|gb|AEE78994.1| peptidoglycan-binding LysM domain-containing protein [Arabidopsis
thaliana]
Length = 109
Score = 111 bits (277), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 76/104 (73%), Gaps = 8/104 (7%)
Query: 5 SSTTELAEKIAWHCALFMAIMLVLSCCESSDSGGF-MGQVTQPRNV------NKP-CDEI 56
SS+ +AEKI+W+CA+F A+ML+++ + + G + + QP + +P CDEI
Sbjct: 4 SSSMAVAEKISWYCAVFAAMMLLMNSFQVAQEGSTEIVEKQQPSMMITGYSHRRPACDEI 63
Query: 57 YVVREGETLHTISEKCGDPYIVEQNPHINDPDDVFPGLVIKITP 100
Y V+EGETL TISEKCGDPYIVE NPHI+D DD+FPGL+I+ITP
Sbjct: 64 YEVKEGETLQTISEKCGDPYIVEGNPHIHDHDDLFPGLLIRITP 107
>gi|255541432|ref|XP_002511780.1| conserved hypothetical protein [Ricinus communis]
gi|223548960|gb|EEF50449.1| conserved hypothetical protein [Ricinus communis]
Length = 114
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 67/91 (73%)
Query: 10 LAEKIAWHCALFMAIMLVLSCCESSDSGGFMGQVTQPRNVNKPCDEIYVVREGETLHTIS 69
+A+ +W+CAL + +++ S + + +++PCDEIYVV+EGETLHTIS
Sbjct: 16 IADVASWYCALVLVTLILQSSLRETSIYDPYEVFKGNQILDRPCDEIYVVQEGETLHTIS 75
Query: 70 EKCGDPYIVEQNPHINDPDDVFPGLVIKITP 100
KCGDP+IVE+NPHI+DPDDVFPGLVIKITP
Sbjct: 76 SKCGDPFIVEKNPHIHDPDDVFPGLVIKITP 106
>gi|357515639|ref|XP_003628108.1| hypothetical protein MTR_8g043660 [Medicago truncatula]
gi|357515653|ref|XP_003628115.1| hypothetical protein MTR_8g043870 [Medicago truncatula]
gi|355522130|gb|AET02584.1| hypothetical protein MTR_8g043660 [Medicago truncatula]
gi|355522137|gb|AET02591.1| hypothetical protein MTR_8g043870 [Medicago truncatula]
Length = 116
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/107 (51%), Positives = 70/107 (65%), Gaps = 20/107 (18%)
Query: 6 STTELAEKIAWHCALFMAIMLVLSCCESS------------DSGGFMGQVTQPRNVNKPC 53
S+ +AE +W+CA+F+ +++LS S +S F+ KPC
Sbjct: 13 SSKAIAEAASWYCAIFLVALILLSIFRDSSMIPNNNDHNMIESNHFLSS--------KPC 64
Query: 54 DEIYVVREGETLHTISEKCGDPYIVEQNPHINDPDDVFPGLVIKITP 100
DEIYVV EGETL+TIS+KC DP+IVE NPHI+DPDDVFPGLVIKITP
Sbjct: 65 DEIYVVGEGETLNTISDKCNDPFIVENNPHIHDPDDVFPGLVIKITP 111
>gi|449465170|ref|XP_004150301.1| PREDICTED: uncharacterized protein LOC101210054 [Cucumis sativus]
gi|449516711|ref|XP_004165390.1| PREDICTED: uncharacterized LOC101210054 [Cucumis sativus]
Length = 120
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/91 (60%), Positives = 72/91 (79%), Gaps = 4/91 (4%)
Query: 10 LAEKIAWHCAL-FMAIMLVLSCCESSDSGGFMGQVTQPRNVN-KPCDEIYVVREGETLHT 67
L + ++W+CA+ + ++L+ S E+S SG G++ + V +PCDEIYVV EGETLHT
Sbjct: 19 LIDVVSWYCAVGLLGLILIGSIRETSSSGD--GRLLRGNLVTWRPCDEIYVVGEGETLHT 76
Query: 68 ISEKCGDPYIVEQNPHINDPDDVFPGLVIKI 98
IS+KCGDPYIVE+NPHI+DPDDVFPGLVIKI
Sbjct: 77 ISDKCGDPYIVERNPHIHDPDDVFPGLVIKI 107
>gi|356506314|ref|XP_003521930.1| PREDICTED: uncharacterized protein LOC100813243 [Glycine max]
Length = 114
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/97 (51%), Positives = 72/97 (74%), Gaps = 1/97 (1%)
Query: 5 SSTTELAEKIAWHCALFMAIMLVLSCCESSDSGGFMGQVTQPRNVNKPCDEIYVVREGET 64
+S+ +A+ +W+CA + +++LS + S S + + +++PC+EIYVV EGET
Sbjct: 14 TSSKAIADAASWYCAFVLVALVLLSMFKGS-SIMMLPSHANNQLLSRPCEEIYVVGEGET 72
Query: 65 LHTISEKCGDPYIVEQNPHINDPDDVFPGLVIKITPF 101
LHTIS+KCGDP+IVE NPHI+DPDDVFPGLVI++TP
Sbjct: 73 LHTISDKCGDPFIVENNPHIHDPDDVFPGLVIEVTPL 109
>gi|224134687|ref|XP_002321883.1| predicted protein [Populus trichocarpa]
gi|222868879|gb|EEF06010.1| predicted protein [Populus trichocarpa]
Length = 113
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/103 (51%), Positives = 73/103 (70%), Gaps = 17/103 (16%)
Query: 10 LAEKIAWHCALFMAIMLVLSCCESSDSGGFMGQVTQPRN--------VNKPCDEIYVVRE 61
+A+ +W+CA+ + +++L G + + + P++ ++PCDEIYVV E
Sbjct: 16 IADVASWNCAIVLLCLILL---------GSIREYSVPKDQPVKGSQLFDRPCDEIYVVGE 66
Query: 62 GETLHTISEKCGDPYIVEQNPHINDPDDVFPGLVIKITPFKNR 104
GETLHTIS+KCGDP+IVEQNPHI+DPDDVFPGLVIKITP + R
Sbjct: 67 GETLHTISDKCGDPFIVEQNPHIHDPDDVFPGLVIKITPSRPR 109
>gi|225453879|ref|XP_002273022.1| PREDICTED: uncharacterized protein LOC100252258 [Vitis vinifera]
Length = 97
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 72/95 (75%), Gaps = 2/95 (2%)
Query: 10 LAEKIAWHCALFMAIMLVLSCCESSDSGGFMGQVTQPRNVNKPCDEIYVVREGETLHTIS 69
+A +W+CAL + +++LS S GG ++ + V++ CDE+YVV EGETLH IS
Sbjct: 1 MASSASWYCALLLVSLILLSSSVESSLGG--ERIRGNQLVDRACDEVYVVGEGETLHMIS 58
Query: 70 EKCGDPYIVEQNPHINDPDDVFPGLVIKITPFKNR 104
+KCGDP+IVEQNPHI DPDDVFPGLVIKITP+K+R
Sbjct: 59 DKCGDPFIVEQNPHIQDPDDVFPGLVIKITPYKSR 93
>gi|351722484|ref|NP_001235454.1| uncharacterized protein LOC100500258 precursor [Glycine max]
gi|255629859|gb|ACU15280.1| unknown [Glycine max]
Length = 100
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 1/92 (1%)
Query: 11 AEKIAWHCALFMAIMLVLSCCESSDSGGFMGQVTQPRNV-NKPCDEIYVVREGETLHTIS 69
A+ +W+CA+ + M++L S G+ + N+ +PCDEIYVV EGETLHTIS
Sbjct: 6 ADSASWYCAMVLLAMILLGSIRESTMAEEEGEPIKGNNLRQRPCDEIYVVGEGETLHTIS 65
Query: 70 EKCGDPYIVEQNPHINDPDDVFPGLVIKITPF 101
+ C DP+IVE+NPHI+DPDDVFPGLVIKI P
Sbjct: 66 DMCNDPFIVERNPHIHDPDDVFPGLVIKIIPI 97
>gi|414867450|tpg|DAA46007.1| TPA: hypothetical protein ZEAMMB73_211269 [Zea mays]
Length = 117
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 68/109 (62%), Gaps = 7/109 (6%)
Query: 1 MARASSTTELAEKIAWHCALFMAIMLVLSCCESSD------SGGFMGQVTQPRNVNKPCD 54
MA + A+ +W CAL +M+V S S S + V PR +PCD
Sbjct: 1 MAAQRRWSGAADVASW-CALLALVMVVGSLAGSGKEEPEQYSRAGLVVVRGPRLAARPCD 59
Query: 55 EIYVVREGETLHTISEKCGDPYIVEQNPHINDPDDVFPGLVIKITPFKN 103
E+YVV EGETLH+IS CGDPYI+E+NPH++DPDDVFPGLVIKITP
Sbjct: 60 ELYVVAEGETLHSISASCGDPYILERNPHVHDPDDVFPGLVIKITPHAG 108
>gi|356532048|ref|XP_003534586.1| PREDICTED: uncharacterized protein LOC100778431 [Glycine max]
Length = 114
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 72/104 (69%), Gaps = 8/104 (7%)
Query: 2 ARASSTTELAEKIAWHCALFMAIMLVLSCCES-----SDSGGFMGQVTQPRNVNKP-CDE 55
A SS+ +A+ +W CA F+ +L+L D G M + + ++KP CDE
Sbjct: 8 APISSSKAIADAASWCCACFLVSLLLLCIFRDISALHDDQGNLMMRSSHV--LSKPSCDE 65
Query: 56 IYVVREGETLHTISEKCGDPYIVEQNPHINDPDDVFPGLVIKIT 99
IYVV EGETLHTIS+KCGDP+IVE+NPHI+DPDDVFPGLV+KIT
Sbjct: 66 IYVVGEGETLHTISDKCGDPFIVEKNPHIHDPDDVFPGLVLKIT 109
>gi|351721055|ref|NP_001235917.1| uncharacterized protein LOC100500035 precursor [Glycine max]
gi|255628651|gb|ACU14670.1| unknown [Glycine max]
Length = 101
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 63/91 (69%)
Query: 11 AEKIAWHCALFMAIMLVLSCCESSDSGGFMGQVTQPRNVNKPCDEIYVVREGETLHTISE 70
A+ +W+CA+ + ++L S + + +PCDEIYVV EGETLHTIS+
Sbjct: 8 ADSASWYCAMVLLATILLGSIRESTVAEEGEPIKGNNLLQRPCDEIYVVGEGETLHTISD 67
Query: 71 KCGDPYIVEQNPHINDPDDVFPGLVIKITPF 101
KC DP+IVE+NPHI+DPDDVFPGLVIKITP
Sbjct: 68 KCNDPFIVERNPHIHDPDDVFPGLVIKITPI 98
>gi|242040459|ref|XP_002467624.1| hypothetical protein SORBIDRAFT_01g031120 [Sorghum bicolor]
gi|241921478|gb|EER94622.1| hypothetical protein SORBIDRAFT_01g031120 [Sorghum bicolor]
Length = 127
Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 64/97 (65%), Gaps = 7/97 (7%)
Query: 11 AEKIAWHCALFMAIMLVLSCCESSDS------GGFMGQVTQPR-NVNKPCDEIYVVREGE 63
A +A CAL +M+V S S D GG V R +PCDE+YVV EGE
Sbjct: 12 ATDVASWCALLALVMVVGSLAGSGDDEEQYDRGGRRLVVRGARLAAARPCDELYVVAEGE 71
Query: 64 TLHTISEKCGDPYIVEQNPHINDPDDVFPGLVIKITP 100
TLH+IS +CGDPYI+E NPH++DPDDVFPGLVIKITP
Sbjct: 72 TLHSISARCGDPYILEHNPHVHDPDDVFPGLVIKITP 108
>gi|255539587|ref|XP_002510858.1| conserved hypothetical protein [Ricinus communis]
gi|223549973|gb|EEF51460.1| conserved hypothetical protein [Ricinus communis]
Length = 104
Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 47/56 (83%), Positives = 53/56 (94%)
Query: 49 VNKPCDEIYVVREGETLHTISEKCGDPYIVEQNPHINDPDDVFPGLVIKITPFKNR 104
+++PCDEIYVV EGETLHTIS+KCGDP+IVEQNPHI+DPDDVFPGLVIKITP K R
Sbjct: 45 LDRPCDEIYVVGEGETLHTISDKCGDPFIVEQNPHIHDPDDVFPGLVIKITPSKPR 100
>gi|388505396|gb|AFK40764.1| unknown [Lotus japonicus]
Length = 115
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 68/95 (71%), Gaps = 2/95 (2%)
Query: 11 AEKIAWHCALFMAIMLVLSCCESSDSGGFMGQVTQPRNV-NKPCDEIYVVREGETLHTIS 69
+ +W CA+ + +++L + S S G + N+ ++ CDEIYVV EGETL+TIS
Sbjct: 14 TDSASWFCAMVLLGIILLGSIKESTSNTSDGDEVRGNNLRDRACDEIYVVGEGETLNTIS 73
Query: 70 EKCGDPYIVEQNPHINDPDDVFPGLVIK-ITPFKN 103
+KCGDP+IVE+NPHI+DPDDVFPGLVI+ ITP N
Sbjct: 74 DKCGDPFIVERNPHIHDPDDVFPGLVIRIITPMVN 108
>gi|388522061|gb|AFK49092.1| unknown [Lotus japonicus]
Length = 113
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 68/95 (71%), Gaps = 2/95 (2%)
Query: 11 AEKIAWHCALFMAIMLVLSCCESSDSGGFMGQVTQPRNV-NKPCDEIYVVREGETLHTIS 69
+ +W CA+ + +++L + S S G + N+ ++ CDEIYVV EGETL+TIS
Sbjct: 12 TDSASWFCAMVLLGIILLGSIKESTSNTSDGDEVRGNNLRDRACDEIYVVGEGETLNTIS 71
Query: 70 EKCGDPYIVEQNPHINDPDDVFPGLVIK-ITPFKN 103
+KCGDP+IVE+NPHI+DPDDVFPGLVI+ ITP N
Sbjct: 72 DKCGDPFIVERNPHIHDPDDVFPGLVIRIITPMVN 106
>gi|351723045|ref|NP_001237009.1| uncharacterized protein LOC100306578 precursor [Glycine max]
gi|255628937|gb|ACU14813.1| unknown [Glycine max]
Length = 110
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/104 (55%), Positives = 71/104 (68%), Gaps = 7/104 (6%)
Query: 2 ARASSTTELAEKIAWHCALFMAIMLVLSCCESS-----DSGGFMGQVTQPRNVNKPCDEI 56
A SS+ LA+ +W CA + +L+L S D G M + ++KPCDEI
Sbjct: 8 APISSSKALADAASWCCACLLVSLLLLCIFRDSSALHDDQGNLM--IRSSHVLSKPCDEI 65
Query: 57 YVVREGETLHTISEKCGDPYIVEQNPHINDPDDVFPGLVIKITP 100
YVV EGE LHTIS+KCGDP+IVE+NPHI+DPDDVFPGLVIKITP
Sbjct: 66 YVVGEGEALHTISDKCGDPFIVEKNPHIHDPDDVFPGLVIKITP 109
>gi|224067836|ref|XP_002302557.1| predicted protein [Populus trichocarpa]
gi|222844283|gb|EEE81830.1| predicted protein [Populus trichocarpa]
Length = 105
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/54 (81%), Positives = 52/54 (96%)
Query: 51 KPCDEIYVVREGETLHTISEKCGDPYIVEQNPHINDPDDVFPGLVIKITPFKNR 104
+PCDEIYVV+EGETLHTIS+KC DP+IVE+NPHI+DPDDVFPGLVIKITP ++R
Sbjct: 48 RPCDEIYVVKEGETLHTISDKCDDPFIVEENPHIHDPDDVFPGLVIKITPSRSR 101
>gi|218191971|gb|EEC74398.1| hypothetical protein OsI_09751 [Oryza sativa Indica Group]
Length = 122
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/68 (67%), Positives = 53/68 (77%)
Query: 37 GGFMGQVTQPRNVNKPCDEIYVVREGETLHTISEKCGDPYIVEQNPHINDPDDVFPGLVI 96
GG V + C+EIYVV EGETLH+IS+KCGDPYI+EQNPH++DPDDVFPGLVI
Sbjct: 55 GGVAAVVRGAALSARACEEIYVVAEGETLHSISDKCGDPYILEQNPHVHDPDDVFPGLVI 114
Query: 97 KITPFKNR 104
KITP K R
Sbjct: 115 KITPSKPR 122
>gi|297721751|ref|NP_001173239.1| Os03g0118450 [Oryza sativa Japonica Group]
gi|222624088|gb|EEE58220.1| hypothetical protein OsJ_09188 [Oryza sativa Japonica Group]
gi|255674162|dbj|BAH91967.1| Os03g0118450 [Oryza sativa Japonica Group]
Length = 122
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 43/54 (79%), Positives = 50/54 (92%)
Query: 51 KPCDEIYVVREGETLHTISEKCGDPYIVEQNPHINDPDDVFPGLVIKITPFKNR 104
+ C+EIYVV EGETLH+IS+KCGDPYI+EQNPH++DPDDVFPGLVIKITP K R
Sbjct: 69 RACEEIYVVAEGETLHSISDKCGDPYILEQNPHVHDPDDVFPGLVIKITPSKPR 122
>gi|357444101|ref|XP_003592328.1| hypothetical protein MTR_1g101680 [Medicago truncatula]
gi|355481376|gb|AES62579.1| hypothetical protein MTR_1g101680 [Medicago truncatula]
gi|388493424|gb|AFK34778.1| unknown [Medicago truncatula]
Length = 104
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 65/95 (68%), Gaps = 2/95 (2%)
Query: 11 AEKIAWHCALFMAIMLVLSCCESSDSGGFMGQVTQPRNVNKPCDEIYVVREGETLHTISE 70
+ +W+CA+ + M++L S + + +K CDEIYVV EGETL+TISE
Sbjct: 6 GDSASWYCAIALLGMILLGSIRESTVAELQVRGNSLGD-HKACDEIYVVGEGETLNTISE 64
Query: 71 KCGDPYIVEQNPHINDPDDVFPGLVIK-ITPFKNR 104
KCGDP+IVE+NPHI+DPDDVFPGLVI+ ITP R
Sbjct: 65 KCGDPFIVERNPHIHDPDDVFPGLVIRIITPTNTR 99
>gi|356529302|ref|XP_003533234.1| PREDICTED: uncharacterized protein LOC100793321 [Glycine max]
Length = 116
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/50 (88%), Positives = 49/50 (98%)
Query: 51 KPCDEIYVVREGETLHTISEKCGDPYIVEQNPHINDPDDVFPGLVIKITP 100
+PCDEIYVV EGETLHTIS+KCGDP+IVE+NPHI+DPDDVFPGLVIKITP
Sbjct: 54 RPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKITP 103
>gi|414864403|tpg|DAA42960.1| TPA: lysM domain containing protein [Zea mays]
Length = 112
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/97 (54%), Positives = 67/97 (69%), Gaps = 3/97 (3%)
Query: 11 AEKIAWHCALFMAIMLVLSCCESSDSGGFMGQVTQPRNVN---KPCDEIYVVREGETLHT 67
A+ +W AL + MLV+ C + GG V R +PC+EIYVV EGETLH+
Sbjct: 16 ADAASWCVALSLVAMLVVVCTLGAGEGGGGAPVVVVRGAALSARPCEEIYVVAEGETLHS 75
Query: 68 ISEKCGDPYIVEQNPHINDPDDVFPGLVIKITPFKNR 104
IS+KCGDP I+E+NPH++DPDDVFPGLVI+ITP K R
Sbjct: 76 ISDKCGDPLILERNPHVHDPDDVFPGLVIRITPSKPR 112
>gi|356561718|ref|XP_003549126.1| PREDICTED: uncharacterized protein LOC100789966 [Glycine max]
Length = 112
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/50 (88%), Positives = 49/50 (98%)
Query: 51 KPCDEIYVVREGETLHTISEKCGDPYIVEQNPHINDPDDVFPGLVIKITP 100
+PCDEIYVV EGETLHTIS+KCGDP+IVE+NPHI+DPDDVFPGLVIKITP
Sbjct: 50 RPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKITP 99
>gi|27452901|gb|AAO15285.1| Putative dihydrodipicolinate reductase-like protein [Oryza sativa
Japonica Group]
Length = 463
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 42/52 (80%), Positives = 49/52 (94%)
Query: 51 KPCDEIYVVREGETLHTISEKCGDPYIVEQNPHINDPDDVFPGLVIKITPFK 102
+ C+EIYVV EGETLH+IS+KCGDPYI+EQNPH++DPDDVFPGLVIKITP K
Sbjct: 69 RACEEIYVVAEGETLHSISDKCGDPYILEQNPHVHDPDDVFPGLVIKITPSK 120
>gi|357140876|ref|XP_003571988.1| PREDICTED: uncharacterized protein LOC100821016 [Brachypodium
distachyon]
Length = 116
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/101 (50%), Positives = 68/101 (67%), Gaps = 4/101 (3%)
Query: 3 RASSTTELAEKIAWHCALFMAIMLVLSCCESSDSGGFMGQVT--QPRNVNK-PCDEIYVV 59
R + A+ +W AL + +L++S + +G G V PR ++ PC+EIYVV
Sbjct: 8 RRTGLVAAADAASWCFALSVVALLLVSSL-GAGAGEERGAVVVRGPRLQSRGPCEEIYVV 66
Query: 60 REGETLHTISEKCGDPYIVEQNPHINDPDDVFPGLVIKITP 100
EGETLH IS++CGDPYI+E NPH++DPDDVFPGLVI ITP
Sbjct: 67 GEGETLHGISDRCGDPYILEHNPHVHDPDDVFPGLVINITP 107
>gi|115483026|ref|NP_001065106.1| Os10g0524300 [Oryza sativa Japonica Group]
gi|62733656|gb|AAO00717.2| expressed protein [Oryza sativa Japonica Group]
gi|78708937|gb|ABB47912.1| LysM domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|113639715|dbj|BAF27020.1| Os10g0524300 [Oryza sativa Japonica Group]
gi|215693225|dbj|BAG88607.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 108
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 42/54 (77%), Positives = 50/54 (92%)
Query: 51 KPCDEIYVVREGETLHTISEKCGDPYIVEQNPHINDPDDVFPGLVIKITPFKNR 104
+PC+EIYVV EGETLH+IS++CGDPYI+EQNPH++DPDDVFPGLVIKITP R
Sbjct: 53 RPCEEIYVVEEGETLHSISDRCGDPYILEQNPHVHDPDDVFPGLVIKITPRPGR 106
>gi|22328924|ref|NP_680740.1| peptidoglycan-binding LysM domain-containing protein [Arabidopsis
thaliana]
gi|45773918|gb|AAS76763.1| At4g25433 [Arabidopsis thaliana]
gi|110741643|dbj|BAE98768.1| hypothetical protein [Arabidopsis thaliana]
gi|332659657|gb|AEE85057.1| peptidoglycan-binding LysM domain-containing protein [Arabidopsis
thaliana]
Length = 110
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 70/101 (69%), Gaps = 10/101 (9%)
Query: 7 TTELAEKIAWHCALFMAIMLVLSCCESSDSGGFMGQVTQPRN---------VNKPCDEIY 57
T + +A +C + + I+ + ++S+ GG G+ + RN + +PC+E+Y
Sbjct: 5 TVSRSNTVASYCLVALLILTLAGSVKNSNGGG-SGEYYRGRNCEVWRGKQMMERPCEELY 63
Query: 58 VVREGETLHTISEKCGDPYIVEQNPHINDPDDVFPGLVIKI 98
VV EG+TLH+ISEKCGDP+IVE+NPHI+DPDDVFPGL+IK+
Sbjct: 64 VVGEGDTLHSISEKCGDPFIVERNPHIHDPDDVFPGLLIKL 104
>gi|326487824|dbj|BAK05584.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 156
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 45/70 (64%), Positives = 53/70 (75%), Gaps = 3/70 (4%)
Query: 37 GGFMGQVTQPR---NVNKPCDEIYVVREGETLHTISEKCGDPYIVEQNPHINDPDDVFPG 93
GG PR +PCDE+YVV EGETLHTIS+KCGDP+IVE+NPH++DPDDVFPG
Sbjct: 86 GGAAAYFRGPRLGGAAARPCDEVYVVGEGETLHTISDKCGDPFIVERNPHVHDPDDVFPG 145
Query: 94 LVIKITPFKN 103
LVI + P KN
Sbjct: 146 LVIALRPTKN 155
>gi|224122456|ref|XP_002318841.1| predicted protein [Populus trichocarpa]
gi|222859514|gb|EEE97061.1| predicted protein [Populus trichocarpa]
Length = 113
Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 44/55 (80%), Positives = 51/55 (92%)
Query: 50 NKPCDEIYVVREGETLHTISEKCGDPYIVEQNPHINDPDDVFPGLVIKITPFKNR 104
++PCDEIYVV EGETL+TISEKC DP+IVEQNPHI+DPDDV+PGLVIKIT K+R
Sbjct: 54 DRPCDEIYVVGEGETLNTISEKCDDPFIVEQNPHIHDPDDVYPGLVIKITSSKSR 108
>gi|125532699|gb|EAY79264.1| hypothetical protein OsI_34380 [Oryza sativa Indica Group]
gi|125575452|gb|EAZ16736.1| hypothetical protein OsJ_32213 [Oryza sativa Japonica Group]
Length = 106
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 42/54 (77%), Positives = 50/54 (92%)
Query: 51 KPCDEIYVVREGETLHTISEKCGDPYIVEQNPHINDPDDVFPGLVIKITPFKNR 104
+PC+EIYVV EGETLH+IS++CGDPYI+EQNPH++DPDDVFPGLVIKITP R
Sbjct: 51 RPCEEIYVVEEGETLHSISDRCGDPYILEQNPHVHDPDDVFPGLVIKITPRPGR 104
>gi|242042471|ref|XP_002468630.1| hypothetical protein SORBIDRAFT_01g049330 [Sorghum bicolor]
gi|241922484|gb|EER95628.1| hypothetical protein SORBIDRAFT_01g049330 [Sorghum bicolor]
Length = 116
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 51/54 (94%)
Query: 51 KPCDEIYVVREGETLHTISEKCGDPYIVEQNPHINDPDDVFPGLVIKITPFKNR 104
+PC+EIYVV EGETLH+IS++CGDP+I+E+NPH++DPDDVFPGLVI+ITP K R
Sbjct: 63 RPCEEIYVVAEGETLHSISDRCGDPFILERNPHVHDPDDVFPGLVIRITPSKPR 116
>gi|297793777|ref|XP_002864773.1| peptidoglycan-binding LysM domain-containing protein [Arabidopsis
lyrata subsp. lyrata]
gi|297310608|gb|EFH41032.1| peptidoglycan-binding LysM domain-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 102
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 42/51 (82%), Positives = 48/51 (94%)
Query: 51 KPCDEIYVVREGETLHTISEKCGDPYIVEQNPHINDPDDVFPGLVIKITPF 101
KPC+EIYVV EGETLHTI +KCGDP+IVE+NPHI+DPDDVFPGLV+KI PF
Sbjct: 46 KPCEEIYVVGEGETLHTIGDKCGDPFIVERNPHIHDPDDVFPGLVLKIAPF 96
>gi|15241722|ref|NP_201021.1| peptidoglycan-binding LysM domain-containing protein [Arabidopsis
thaliana]
gi|10176933|dbj|BAB10177.1| unnamed protein product [Arabidopsis thaliana]
gi|46518349|gb|AAS99656.1| At5g62150 [Arabidopsis thaliana]
gi|48310309|gb|AAT41795.1| At5g62150 [Arabidopsis thaliana]
gi|332010187|gb|AED97570.1| peptidoglycan-binding LysM domain-containing protein [Arabidopsis
thaliana]
Length = 102
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 41/51 (80%), Positives = 48/51 (94%)
Query: 51 KPCDEIYVVREGETLHTISEKCGDPYIVEQNPHINDPDDVFPGLVIKITPF 101
KPC+EIY+V EGETLHTI +KCGDP+IVE+NPHI+DPDDVFPGLV+KI PF
Sbjct: 46 KPCEEIYIVGEGETLHTIGDKCGDPFIVERNPHIHDPDDVFPGLVLKIAPF 96
>gi|226495799|ref|NP_001150468.1| lysM domain containing protein [Zea mays]
gi|195639468|gb|ACG39202.1| lysM domain containing protein [Zea mays]
Length = 113
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 67/98 (68%), Gaps = 4/98 (4%)
Query: 11 AEKIAWHCALFMAIMLVLSC-CESSDSGGFMGQVTQPRNVN---KPCDEIYVVREGETLH 66
A+ +W AL + MLV+ C + + GG V R +PC+EIYVV EGETLH
Sbjct: 16 ADAASWCVALSLVAMLVVLCTLGAGEGGGAGAPVVVVRGAALSARPCEEIYVVAEGETLH 75
Query: 67 TISEKCGDPYIVEQNPHINDPDDVFPGLVIKITPFKNR 104
+IS+KCGDP I+E+NPH++D DDVFPGLVI+ITP K R
Sbjct: 76 SISDKCGDPLILERNPHVHDXDDVFPGLVIRITPSKPR 113
>gi|38605944|emb|CAD41658.3| OSJNBa0019K04.5 [Oryza sativa Japonica Group]
gi|116309923|emb|CAH66956.1| OSIGBa0147H17.4 [Oryza sativa Indica Group]
gi|125591347|gb|EAZ31697.1| hypothetical protein OsJ_15845 [Oryza sativa Japonica Group]
Length = 119
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 41/53 (77%), Positives = 49/53 (92%)
Query: 51 KPCDEIYVVREGETLHTISEKCGDPYIVEQNPHINDPDDVFPGLVIKITPFKN 103
+PC+E+YVV EGETLHTIS+KCGDP+IVE+NPHI+DPDDVFPGLVI + P KN
Sbjct: 65 RPCEEVYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIALRPTKN 117
>gi|297799452|ref|XP_002867610.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297313446|gb|EFH43869.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 114
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 67/104 (64%), Gaps = 12/104 (11%)
Query: 7 TTELAEKIAWHCALFMAIMLVLSCCESSDSGGF---MGQVTQPRN---------VNKPCD 54
T + +A +C + + I+ + ++S GG + RN + +PC+
Sbjct: 5 TVSRSHTVASYCLVALLILTLAGSVKNSHGGGRRENFRAAGRGRNCEVWRGKQMMERPCE 64
Query: 55 EIYVVREGETLHTISEKCGDPYIVEQNPHINDPDDVFPGLVIKI 98
E+YVV EG+TLH+ISEKCGDP+IVE+NPHI+DPDDVFPGL+IK+
Sbjct: 65 ELYVVGEGDTLHSISEKCGDPFIVERNPHIHDPDDVFPGLLIKL 108
>gi|326517473|dbj|BAK03655.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 120
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 40/51 (78%), Positives = 47/51 (92%)
Query: 50 NKPCDEIYVVREGETLHTISEKCGDPYIVEQNPHINDPDDVFPGLVIKITP 100
+PCDEIYVV E ETLH+IS++CGDPYI+E NPH++DPDDVFPGLVIKITP
Sbjct: 62 RRPCDEIYVVAEEETLHSISDRCGDPYILEHNPHVHDPDDVFPGLVIKITP 112
>gi|293336063|ref|NP_001168445.1| uncharacterized protein LOC100382217 [Zea mays]
gi|223948345|gb|ACN28256.1| unknown [Zea mays]
gi|413919211|gb|AFW59143.1| hypothetical protein ZEAMMB73_281794 [Zea mays]
Length = 130
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 38/53 (71%), Positives = 49/53 (92%)
Query: 51 KPCDEIYVVREGETLHTISEKCGDPYIVEQNPHINDPDDVFPGLVIKITPFKN 103
+PC+E+YVV EGETLH+IS++CGDP+IVE+NPHI+DPDDVFPGLVI + P +N
Sbjct: 77 RPCEEVYVVGEGETLHSISDRCGDPFIVERNPHIHDPDDVFPGLVIALCPTRN 129
>gi|357444111|ref|XP_003592333.1| hypothetical protein MTR_1g101750 [Medicago truncatula]
gi|355481381|gb|AES62584.1| hypothetical protein MTR_1g101750 [Medicago truncatula]
Length = 66
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/59 (74%), Positives = 52/59 (88%), Gaps = 1/59 (1%)
Query: 47 RNVNKPCDEIYVVREGETLHTISEKCGDPYIVEQNPHINDPDDVFPGLVIK-ITPFKNR 104
+ ++K CDEIYVV EGETL+TISEKCGDP+IVE+NPHI+DPDDVFPGLVI+ ITP R
Sbjct: 3 KTIHKACDEIYVVGEGETLNTISEKCGDPFIVERNPHIHDPDDVFPGLVIRIITPTNTR 61
>gi|326500138|dbj|BAJ90904.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 124
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 37/49 (75%), Positives = 47/49 (95%)
Query: 51 KPCDEIYVVREGETLHTISEKCGDPYIVEQNPHINDPDDVFPGLVIKIT 99
+PC+EIYVV EGETLH IS++CGDPYI+E+NPH++DPDDVFPGLV++IT
Sbjct: 61 RPCEEIYVVAEGETLHGISDRCGDPYILERNPHVHDPDDVFPGLVLRIT 109
>gi|357168226|ref|XP_003581545.1| PREDICTED: uncharacterized protein LOC100838759 [Brachypodium
distachyon]
Length = 208
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 38/52 (73%), Positives = 48/52 (92%)
Query: 52 PCDEIYVVREGETLHTISEKCGDPYIVEQNPHINDPDDVFPGLVIKITPFKN 103
PC+E+YVV EGETLH+IS+KCGDP+IVE+NPH++DPDDVFPGLV+ + P KN
Sbjct: 156 PCEEVYVVGEGETLHSISDKCGDPFIVERNPHVHDPDDVFPGLVLALRPTKN 207
>gi|148907358|gb|ABR16814.1| unknown [Picea sitchensis]
Length = 97
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 40/52 (76%)
Query: 50 NKPCDEIYVVREGETLHTISEKCGDPYIVEQNPHINDPDDVFPGLVIKITPF 101
N+PC+EIY+V EGETL TISEKC P+I+ NPHI D DD++ GL +KIT
Sbjct: 43 NRPCEEIYIVGEGETLQTISEKCNAPFILFDNPHIQDTDDIYEGLPLKITSL 94
>gi|116778633|gb|ABK20943.1| unknown [Picea sitchensis]
Length = 89
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 37/47 (78%)
Query: 53 CDEIYVVREGETLHTISEKCGDPYIVEQNPHINDPDDVFPGLVIKIT 99
C+EIY+V EGETL TISEKC P+I+ NPHI D DD++ G+ +KIT
Sbjct: 40 CEEIYIVGEGETLQTISEKCNAPFILFDNPHIQDTDDIYEGVPLKIT 86
>gi|357486567|ref|XP_003613571.1| hypothetical protein MTR_5g038200 [Medicago truncatula]
gi|355514906|gb|AES96529.1| hypothetical protein MTR_5g038200 [Medicago truncatula]
Length = 74
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 33/43 (76%)
Query: 48 NVNKPCDEIYVVREGETLHTISEKCGDPYIVEQNPHINDPDDV 90
N K CDE YVVREG+T ++I+EKC DP+I+ NPH+ DP D+
Sbjct: 32 NDAKECDEFYVVREGDTFYSIAEKCNDPFILLSNPHVRDPQDI 74
>gi|168020021|ref|XP_001762542.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686275|gb|EDQ72665.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 59
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 34/47 (72%)
Query: 52 PCDEIYVVREGETLHTISEKCGDPYIVEQNPHINDPDDVFPGLVIKI 98
PC YVVR GE+L ISEKC D +I+E NPHI D DD+F G ++K+
Sbjct: 9 PCGPTYVVRGGESLQMISEKCNDQFILENNPHIVDHDDLFEGQLLKM 55
>gi|357505141|ref|XP_003622859.1| Cell division cycle protein-like protein [Medicago truncatula]
gi|355497874|gb|AES79077.1| Cell division cycle protein-like protein [Medicago truncatula]
Length = 496
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 27/32 (84%)
Query: 65 LHTISEKCGDPYIVEQNPHINDPDDVFPGLVI 96
L T S+KC P+IV+ NPHI+DPDDVFPGLVI
Sbjct: 461 LSTNSDKCDGPFIVKNNPHIHDPDDVFPGLVI 492
>gi|357438289|ref|XP_003589420.1| LysM domain containing protein [Medicago truncatula]
gi|357473045|ref|XP_003606807.1| LysM domain containing protein [Medicago truncatula]
gi|355478468|gb|AES59671.1| LysM domain containing protein [Medicago truncatula]
gi|355507862|gb|AES89004.1| LysM domain containing protein [Medicago truncatula]
Length = 72
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 34/43 (79%)
Query: 58 VVREGETLHTISEKCGDPYIVEQNPHINDPDDVFPGLVIKITP 100
+V+EGET ++I+EKC D I+ NP+++D +D+ PG++++I P
Sbjct: 28 MVKEGETYYSIAEKCDDQSILFSNPNVHDSEDIVPGVILRINP 70
>gi|258516576|ref|YP_003192798.1| molybdenum ABC transporter periplasmic molybdate-binding protein
[Desulfotomaculum acetoxidans DSM 771]
gi|257780281|gb|ACV64175.1| molybdenum ABC transporter, periplasmic molybdate-binding protein
[Desulfotomaculum acetoxidans DSM 771]
Length = 335
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 55 EIYVVREGETLHTISEKCGDPY--IVEQNPHINDPDDVFPGLVIKI 98
+ Y+V+ G+T+ TIS+K G ++ NP I +PD +FPG VI I
Sbjct: 59 KTYIVQAGDTMFTISQKYGIELETLIAANPQIKNPDLIFPGQVINI 104
>gi|121604657|ref|YP_981986.1| peptidoglycan-binding LysM [Polaromonas naphthalenivorans CJ2]
gi|120593626|gb|ABM37065.1| Peptidoglycan-binding LysM [Polaromonas naphthalenivorans CJ2]
Length = 195
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 17/85 (20%)
Query: 27 VLSCCESSDSGGFMGQVTQPRNV-----NKPCDEIYVVREGETLHTISEKC-GDP----Y 76
VL CC G +GQV+ +++ + P ++YVV G+ L IS++ G P
Sbjct: 115 VLLCC------GNVGQVSAVKDMLTVVSSSPESQMYVVVSGDNLSKISKQFYGTPNKYTQ 168
Query: 77 IVEQN-PHINDPDDVFPGLVIKITP 100
I E N P ++DPD ++PG V++I P
Sbjct: 169 IFEANKPMLSDPDKIYPGQVLRIPP 193
>gi|147678269|ref|YP_001212484.1| LysM repeat-containing protein [Pelotomaculum thermopropionicum SI]
gi|146274366|dbj|BAF60115.1| FOG: LysM repeat [Pelotomaculum thermopropionicum SI]
Length = 127
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 39 FMGQVTQ---PRNVNKPCDEIYVVREGETLHTISEKCGDPY--IVEQNPHINDPDDVFPG 93
F GQ+ P P +Y+V+ GETL++I+ K Y +++ NP I DP+ ++PG
Sbjct: 39 FPGQIIHIPLPGKAPIPRAALYIVQPGETLNSIALKFNVQYGSLLQANPQIGDPNLIYPG 98
Query: 94 LVIKI 98
+I I
Sbjct: 99 QIIAI 103
>gi|218778340|ref|YP_002429658.1| peptidoglycan-binding LysM [Desulfatibacillum alkenivorans AK-01]
gi|218759724|gb|ACL02190.1| Peptidoglycan-binding LysM [Desulfatibacillum alkenivorans AK-01]
Length = 353
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 29/47 (61%), Gaps = 5/47 (10%)
Query: 57 YVVREGETLHTISEKCGD-----PYIVEQNPHINDPDDVFPGLVIKI 98
Y V+EG+TL ISEK D P + +QNPHI +P + PG VI I
Sbjct: 41 YTVQEGDTLWDISEKFFDTPAMWPEVWKQNPHIKNPHWIEPGTVINI 87
>gi|262371337|ref|ZP_06064655.1| LysM domain-containing protein [Acinetobacter johnsonii SH046]
gi|262313674|gb|EEY94723.1| LysM domain-containing protein [Acinetobacter johnsonii SH046]
Length = 384
Score = 41.2 bits (95), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 11/95 (11%)
Query: 21 FMAIMLVLSCCESSDSGGF-MGQVTQPRNVNKPC-----DEIYVVREGETLHTISEKCGD 74
F ML L+ C S +G Q RN N P +YVV++G+TL IS++ +
Sbjct: 16 FKQHMLALAVCVSVGAGVISTAQAAPTRNYNPPALKANAPNVYVVKKGDTLWDISKRFLN 75
Query: 75 -----PYIVEQNPHINDPDDVFPGLVIKITPFKNR 104
P I N H+ +P +FPG + + ++ R
Sbjct: 76 NPVRWPEIWASNRHVKNPHWIFPGDRLLMCTYEGR 110
>gi|317133583|ref|YP_004092897.1| glycoside hydrolase family protein [Ethanoligenens harbinense
YUAN-3]
gi|315471562|gb|ADU28166.1| glycoside hydrolase family 18 [Ethanoligenens harbinense YUAN-3]
Length = 426
Score = 41.2 bits (95), Expect = 0.072, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 56 IYVVREGETLHTISEKCGDP--YIVEQNPHINDPDDVFPGLVIKITPFKNR 104
IY VR G+++ I+++ G P I+E+NP I D ++PG ++ I P + R
Sbjct: 52 IYTVRPGDSVFAIAQRYGVPPSSILEENPDIEDGSRLYPGQIVVIPPPQAR 102
>gi|410418285|ref|YP_006898734.1| hypothetical protein BN115_0482 [Bordetella bronchiseptica MO149]
gi|427817772|ref|ZP_18984835.1| putative membrane protein [Bordetella bronchiseptica D445]
gi|427823921|ref|ZP_18990983.1| putative membrane protein [Bordetella bronchiseptica Bbr77]
gi|408445580|emb|CCJ57238.1| putative membrane protein [Bordetella bronchiseptica MO149]
gi|410568772|emb|CCN16836.1| putative membrane protein [Bordetella bronchiseptica D445]
gi|410589186|emb|CCN04251.1| putative membrane protein [Bordetella bronchiseptica Bbr77]
Length = 183
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 22/106 (20%)
Query: 4 ASSTTELAEKIAWHCALFMAIMLVLSCCESSDSGGFMGQVTQPRNVNKPCDEIYVVREGE 63
++++TE AEKI + + V + +++ + P +Y V++G+
Sbjct: 90 SAASTEAAEKIVLALGNTVGVAQVDNQLQTAQAA--------------PAAVMYTVQKGD 135
Query: 64 TLHTISEK-------CGDPYIVEQN-PHINDPDDVFPGLVIKITPF 101
TL I+E P I E N P ++DPD ++PG V++I P
Sbjct: 136 TLWKIAEANYGKGKGAKYPTIFEANKPMLSDPDKIYPGQVLRIPPL 181
>gi|33594550|ref|NP_882194.1| LysM domain/BON superfamily protein [Bordetella pertussis Tohama I]
gi|33595210|ref|NP_882853.1| LysM domain/BON superfamily protein [Bordetella parapertussis
12822]
gi|33599498|ref|NP_887058.1| LysM domain/BON superfamily protein [Bordetella bronchiseptica
RB50]
gi|384205847|ref|YP_005591586.1| LysM domain/BON superfamily protein [Bordetella pertussis CS]
gi|410471268|ref|YP_006894549.1| hypothetical protein BN117_0498 [Bordetella parapertussis Bpp5]
gi|412340210|ref|YP_006968965.1| hypothetical protein BN112_2914 [Bordetella bronchiseptica 253]
gi|427812741|ref|ZP_18979805.1| putative membrane protein [Bordetella bronchiseptica 1289]
gi|33564626|emb|CAE43946.1| putative membrane protein [Bordetella pertussis Tohama I]
gi|33565287|emb|CAE36086.1| putative membrane protein [Bordetella parapertussis]
gi|33567094|emb|CAE31007.1| putative membrane protein [Bordetella bronchiseptica RB50]
gi|332383961|gb|AEE68808.1| LysM domain/BON superfamily protein [Bordetella pertussis CS]
gi|408441378|emb|CCJ47831.1| putative membrane protein [Bordetella parapertussis Bpp5]
gi|408770044|emb|CCJ54831.1| putative membrane protein [Bordetella bronchiseptica 253]
gi|410563741|emb|CCN21278.1| putative membrane protein [Bordetella bronchiseptica 1289]
Length = 183
Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 22/106 (20%)
Query: 4 ASSTTELAEKIAWHCALFMAIMLVLSCCESSDSGGFMGQVTQPRNVNKPCDEIYVVREGE 63
++++TE AEKI + + V + +++ + P +Y V++G+
Sbjct: 90 SAASTEAAEKIVLALGNTVGVAQVDNQLQTAQAA--------------PAAVMYTVQKGD 135
Query: 64 TLHTISEK-------CGDPYIVEQN-PHINDPDDVFPGLVIKITPF 101
TL I+E P I E N P ++DPD ++PG V++I P
Sbjct: 136 TLWKIAEANYGKGKGAKYPTIFEANKPMLSDPDKIYPGQVLRIPPL 181
>gi|381198511|ref|ZP_09905849.1| LysM domain-containing protein [Acinetobacter lwoffii WJ10621]
Length = 384
Score = 40.8 bits (94), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 11/95 (11%)
Query: 21 FMAIMLVLSCCESSDSG-GFMGQVTQPRNVNKPC-----DEIYVVREGETLHTISEKCGD 74
F ML L+ C S +G Q RN N P +YVV++G+TL IS++ +
Sbjct: 16 FKQHMLALAVCVSVGAGVTSTAQAAPTRNYNPPALKANAPNVYVVKKGDTLWDISKRFLN 75
Query: 75 -----PYIVEQNPHINDPDDVFPGLVIKITPFKNR 104
P I N H+ +P +FPG + + ++ R
Sbjct: 76 NPVRWPEIWASNRHVKNPHWIFPGDRLLMCTYEGR 110
>gi|262376936|ref|ZP_06070163.1| LysM domain-containing protein [Acinetobacter lwoffii SH145]
gi|262308281|gb|EEY89417.1| LysM domain-containing protein [Acinetobacter lwoffii SH145]
Length = 384
Score = 40.8 bits (94), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 11/95 (11%)
Query: 21 FMAIMLVLSCCESSDSGGFMGQVTQP-RNVNKPC-----DEIYVVREGETLHTISEKCGD 74
F ML L+ C G P RNVN P +YVV++G+TL IS++
Sbjct: 16 FKNQMLALAVCVGVSMGTIHSAEAAPARNVNPPALKANAPNVYVVKKGDTLWDISKRFLK 75
Query: 75 -----PYIVEQNPHINDPDDVFPGLVIKITPFKNR 104
P I N H+ +P +FPG + + ++ R
Sbjct: 76 NPVRWPEIWASNKHVKNPHWIFPGDRLLMCDYQGR 110
>gi|407009728|gb|EKE24810.1| hypothetical protein ACD_6C00031G0004 [uncultured bacterium]
Length = 384
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 11/95 (11%)
Query: 21 FMAIMLVLSCCESSDSGGFMGQVTQP-RNVNKPC-----DEIYVVREGETLHTISEKCGD 74
F ML L+ C G P RNVN P +YVV++G+TL IS++
Sbjct: 16 FKNQMLALAVCVGVSMGTIHSAEAAPARNVNPPALKANAPNVYVVKKGDTLWDISKRFLK 75
Query: 75 -----PYIVEQNPHINDPDDVFPGLVIKITPFKNR 104
P I N H+ +P +FPG + + ++ R
Sbjct: 76 NPVRWPEIWASNKHVKNPHWIFPGDRLLMCDYQGR 110
>gi|256828566|ref|YP_003157294.1| peptidoglycan-binding LysM [Desulfomicrobium baculatum DSM 4028]
gi|256577742|gb|ACU88878.1| Peptidoglycan-binding LysM [Desulfomicrobium baculatum DSM 4028]
Length = 577
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 32/100 (32%)
Query: 23 AIMLVLSCCESSDSGGFMGQVTQP---------------RNVNKPCDEIYVVREGETLHT 67
A++L+L+ C F+ +T+P R KP DE ++V++GE L+
Sbjct: 4 AVLLILALC-------FLTSITKPGFSEKPLRLFFEKNIRVEQKPGDE-HIVKQGEWLYK 55
Query: 68 ISEKCGD---------PYIVEQNPHINDPDDVFPGLVIKI 98
I E G P I NPHI D + + PG VI+I
Sbjct: 56 ILESKGYSATQIQRILPDITALNPHIPDINRLMPGQVIQI 95
>gi|15603839|ref|NP_246913.1| LysM domain/BON superfamily protein [Pasteurella multocida subsp.
multocida str. Pm70]
gi|378774983|ref|YP_005177226.1| peptidoglycan-binding Lysin subgroup family protein [Pasteurella
multocida 36950]
gi|383310946|ref|YP_005363756.1| LysM/phospholipid-binding domain protein [Pasteurella multocida
subsp. multocida str. HN06]
gi|386834995|ref|YP_006240312.1| XkdP protein [Pasteurella multocida subsp. multocida str. 3480]
gi|417852107|ref|ZP_12497749.1| LysM domain/BON superfamily protein [Pasteurella multocida subsp.
gallicida str. Anand1_poultry]
gi|417854849|ref|ZP_12500116.1| LysM domain/BON superfamily protein [Pasteurella multocida subsp.
multocida str. Anand1_goat]
gi|421255193|ref|ZP_15709761.1| LysM domain/BON superfamily protein [Pasteurella multocida subsp.
multocida str. Anand1_buffalo]
gi|421264722|ref|ZP_15715688.1| LysM domain/BON superfamily protein [Pasteurella multocida subsp.
multocida str. P52VAC]
gi|425064711|ref|ZP_18467836.1| hypothetical protein X73_02084 [Pasteurella multocida subsp.
gallicida X73]
gi|425066827|ref|ZP_18469947.1| hypothetical protein P1059_02131 [Pasteurella multocida subsp.
gallicida P1059]
gi|12722412|gb|AAK04058.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
gi|338217270|gb|EGP03159.1| LysM domain/BON superfamily protein [Pasteurella multocida subsp.
multocida str. Anand1_goat]
gi|338217776|gb|EGP03615.1| LysM domain/BON superfamily protein [Pasteurella multocida subsp.
gallicida str. Anand1_poultry]
gi|356597531|gb|AET16257.1| peptidoglycan-binding Lysin subgroup family protein [Pasteurella
multocida 36950]
gi|380872218|gb|AFF24585.1| LysM/phospholipid-binding domain protein [Pasteurella multocida
subsp. multocida str. HN06]
gi|385201698|gb|AFI46553.1| XkdP protein [Pasteurella multocida subsp. multocida str. 3480]
gi|401687834|gb|EJS83531.1| LysM domain/BON superfamily protein [Pasteurella multocida subsp.
multocida str. P52VAC]
gi|401690998|gb|EJS86090.1| LysM domain/BON superfamily protein [Pasteurella multocida subsp.
multocida str. Anand1_buffalo]
gi|404380613|gb|EJZ77103.1| hypothetical protein P1059_02131 [Pasteurella multocida subsp.
gallicida P1059]
gi|404380897|gb|EJZ77386.1| hypothetical protein X73_02084 [Pasteurella multocida subsp.
gallicida X73]
Length = 147
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
Query: 54 DEIYVVREGETLHTISEKC---GDPY--IVEQNPH-INDPDDVFPGLVIKI 98
DE YV+++G+TL I+EK G Y IVE N I D D +FPG I++
Sbjct: 93 DEFYVIQKGDTLWKIAEKTYGNGSKYTAIVEANKEVIKDADKIFPGQKIRL 143
>gi|408417108|ref|YP_006627815.1| hypothetical protein BN118_3358 [Bordetella pertussis 18323]
gi|401779278|emb|CCJ64783.1| putative membrane protein [Bordetella pertussis 18323]
Length = 183
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 22/104 (21%)
Query: 6 STTELAEKIAWHCALFMAIMLVLSCCESSDSGGFMGQVTQPRNVNKPCDEIYVVREGETL 65
++TE AEKI + + V + +++ + P +Y V++G+TL
Sbjct: 92 ASTEAAEKIVLALGNTVGVAQVDNQLQTAQAA--------------PAAVMYTVQKGDTL 137
Query: 66 HTISEK-------CGDPYIVEQN-PHINDPDDVFPGLVIKITPF 101
I+E P I E N P ++DPD ++PG V++I P
Sbjct: 138 WKIAEANYGKGKGAKYPTIFEANKPMLSDPDKIYPGQVLRIPPL 181
>gi|257465134|ref|ZP_05629505.1| LysM domain/BON superfamily protein [Actinobacillus minor 202]
gi|257450794|gb|EEV24837.1| LysM domain/BON superfamily protein [Actinobacillus minor 202]
Length = 147
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 54 DEIYVVREGETLHTISEKC---GDPY--IVEQNPH-INDPDDVFPGLVIKI 98
DE YV+ +G+TL I+EK G Y IVE N I D D +FPG I+I
Sbjct: 93 DEFYVIAKGDTLWKIAEKAYGNGAKYTAIVEANKEVIKDADKIFPGQKIRI 143
>gi|149182265|ref|ZP_01860745.1| hypothetical protein BSG1_19909 [Bacillus sp. SG-1]
gi|148850034|gb|EDL64204.1| hypothetical protein BSG1_19909 [Bacillus sp. SG-1]
Length = 206
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 53 CDEIYVVREGETLHTISEK--CGDPYIVEQNPHINDPDDVFPGLVIKI 98
++Y V+ G+TL IS+K G I+E NP I +PD ++PG I I
Sbjct: 26 AADVYYVQRGDTLWIISKKYQIGLSEIIEANPQIPNPDLIYPGQKINI 73
>gi|218288872|ref|ZP_03493123.1| Peptidoglycan-binding LysM [Alicyclobacillus acidocaldarius LAA1]
gi|218240961|gb|EED08138.1| Peptidoglycan-binding LysM [Alicyclobacillus acidocaldarius LAA1]
Length = 259
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Query: 57 YVVREGETLHTISEKCGD--PYIVEQNPHINDPDDVFPGLVIKI 98
YVV+ GE+L+ IS K G P I+ NP I + +D+ PG+ I I
Sbjct: 4 YVVKPGESLYQISRKTGVRLPLILAANPQIKNANDITPGMTIVI 47
>gi|258512085|ref|YP_003185519.1| Peptidoglycan-binding lysin domain-containing protein
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
DSM 446]
gi|257478811|gb|ACV59130.1| Peptidoglycan-binding lysin domain protein [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
Length = 259
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Query: 57 YVVREGETLHTISEKCGD--PYIVEQNPHINDPDDVFPGLVIKI 98
YVV+ GE+L+ IS K G P I+ NP I + +D+ PG+ I I
Sbjct: 4 YVVKPGESLYQISRKTGVRLPLILAANPQIKNANDIAPGMTIVI 47
>gi|327399103|ref|YP_004339972.1| peptidoglycan-binding lysin domain-containing protein [Hippea
maritima DSM 10411]
gi|327181732|gb|AEA33913.1| Peptidoglycan-binding lysin domain protein [Hippea maritima DSM
10411]
Length = 322
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 34/50 (68%), Gaps = 5/50 (10%)
Query: 55 EIYVVREGETLHTISEKC-GDPYIVEQ----NPHINDPDDVFPGLVIKIT 99
E+Y+V+ +TL IS+K +P++ + N +INDPD +FPG ++K+T
Sbjct: 23 ELYIVKPHDTLWDISKKFYKNPFLWGKLWYNNNYINDPDLIFPGEILKVT 72
>gi|240948835|ref|ZP_04753191.1| hypothetical protein AM305_08039 [Actinobacillus minor NM305]
gi|240296650|gb|EER47261.1| hypothetical protein AM305_08039 [Actinobacillus minor NM305]
Length = 147
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 54 DEIYVVREGETLHTISEKC---GDPY--IVEQNPH-INDPDDVFPGLVIKI 98
DE Y++ +G+TL I+EK G Y IVE N I D D +FPG I+I
Sbjct: 93 DEFYIIAKGDTLWKIAEKAYGNGAKYTAIVEANKEVIKDADKIFPGQKIRI 143
>gi|359298787|ref|ZP_09184626.1| LysM domain/BON superfamily protein [Haemophilus [parainfluenzae]
CCUG 13788]
gi|402306989|ref|ZP_10826022.1| LysM domain protein [Haemophilus sputorum HK 2154]
gi|400373833|gb|EJP26760.1| LysM domain protein [Haemophilus sputorum HK 2154]
Length = 147
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 54 DEIYVVREGETLHTISEKC---GDPY--IVEQNPH-INDPDDVFPGLVIKI 98
DE YV+ +G+TL ISEK G Y IV+ N I D D +FPG I+I
Sbjct: 93 DEFYVIEKGDTLWKISEKAYGNGAKYTAIVDANKEVIKDADKIFPGQKIRI 143
>gi|427718452|ref|YP_007066446.1| peptidoglycan-binding lysin domain-containing protein [Calothrix
sp. PCC 7507]
gi|427350888|gb|AFY33612.1| Peptidoglycan-binding lysin domain protein [Calothrix sp. PCC 7507]
Length = 220
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 4/53 (7%)
Query: 54 DEIYVVREGETLHTI-SEKCGDP---YIVEQNPHINDPDDVFPGLVIKITPFK 102
D + +V+ GETL TI +E+ GDP I+ ++N+P + PG+V+ I P +
Sbjct: 160 DPVRIVKRGETLSTIATEEYGDPALWRIIAAENNLNNPRQLNPGMVLTIPPLR 212
>gi|220917986|ref|YP_002493290.1| peptidoglycan-binding LysM [Anaeromyxobacter dehalogenans 2CP-1]
gi|219955840|gb|ACL66224.1| Peptidoglycan-binding LysM [Anaeromyxobacter dehalogenans 2CP-1]
Length = 440
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Query: 55 EIYVVREGETLHTISEKCGD-----PYIVEQNPHINDPDDVFPGLVIKITPFKN 103
E Y VREG+TL IS + P I NP I +P +FPG +++ PF +
Sbjct: 96 ETYTVREGDTLWDISGRFLSNPWYWPKIWSYNPEITNPHWIFPGNLLRFYPFAD 149
>gi|197123197|ref|YP_002135148.1| peptidoglycan-binding LysM [Anaeromyxobacter sp. K]
gi|196173046|gb|ACG74019.1| Peptidoglycan-binding LysM [Anaeromyxobacter sp. K]
Length = 440
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Query: 55 EIYVVREGETLHTISEKCGD-----PYIVEQNPHINDPDDVFPGLVIKITPFKN 103
E Y VREG+TL IS + P I NP I +P +FPG +++ PF +
Sbjct: 96 ETYTVREGDTLWDISGRFLSNPWYWPKIWSYNPEITNPHWIFPGNLLRFYPFAD 149
>gi|374603486|ref|ZP_09676465.1| LysM repeat protein [Paenibacillus dendritiformis C454]
gi|374390957|gb|EHQ62300.1| LysM repeat protein [Paenibacillus dendritiformis C454]
Length = 523
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Query: 55 EIYVVREGETLHTISEKCGDPY--IVEQNPHINDPDDVFPGLVIKI 98
+I++V+ GE+L++IS+K G P +++ NP + DP+++ G+ IK+
Sbjct: 2 KIHIVKNGESLYSISQKYGVPLEELIKMNPQLKDPNEIDVGMKIKV 47
>gi|358011410|ref|ZP_09143220.1| LysM domain/BON superfamily protein [Acinetobacter sp. P8-3-8]
Length = 157
Score = 38.9 bits (89), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 6/54 (11%)
Query: 51 KPCDEIYVVREGETLHTISEKC-GD----PYIVEQN-PHINDPDDVFPGLVIKI 98
+P + Y V+ G+ L I+++ GD P I E N P + DPD++FPG V++I
Sbjct: 102 EPESKFYTVKSGDNLSKIAKEVYGDANKYPKIFEANKPMLKDPDEIFPGQVLRI 155
>gi|293609072|ref|ZP_06691375.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|375133708|ref|YP_004994358.1| cation transport ATPase [Acinetobacter calcoaceticus PHEA-2]
gi|427425703|ref|ZP_18915787.1| LysM domain protein [Acinetobacter baumannii WC-136]
gi|292829645|gb|EFF88007.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|325121153|gb|ADY80676.1| cation transport ATPase [Acinetobacter calcoaceticus PHEA-2]
gi|425697566|gb|EKU67238.1| LysM domain protein [Acinetobacter baumannii WC-136]
Length = 157
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 6/54 (11%)
Query: 51 KPCDEIYVVREGETLHTISEKC-GD----PYIVEQN-PHINDPDDVFPGLVIKI 98
+P + Y V+ G+ L I+++ GD P I E N P + DPD++FPG V++I
Sbjct: 102 EPESKFYTVKSGDNLSKIAKEVYGDANQYPKIFEANKPMLKDPDEIFPGQVLRI 155
>gi|410657227|ref|YP_006909598.1| hypothetical protein DHBDCA_p584 [Dehalobacter sp. DCA]
gi|410660263|ref|YP_006912634.1| hypothetical protein DCF50_p642 [Dehalobacter sp. CF]
gi|409019582|gb|AFV01613.1| hypothetical protein DHBDCA_p584 [Dehalobacter sp. DCA]
gi|409022619|gb|AFV04649.1| hypothetical protein DCF50_p642 [Dehalobacter sp. CF]
Length = 144
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 49 VNKPCDEIYVVREGETLHTISEKCG-DPYIVEQNPHINDPDDVFPGLVIKITP 100
V+KP E+YVV++G+T++ I+++ G D + H+ +PD ++PG + I P
Sbjct: 90 VHKPLPEVYVVQKGDTVYKIAQRYGLDWRELAGYNHLGNPDLIYPGERLFIPP 142
>gi|354558962|ref|ZP_08978215.1| Peptidoglycan-binding lysin domain protein [Desulfitobacterium
metallireducens DSM 15288]
gi|353545286|gb|EHC14738.1| Peptidoglycan-binding lysin domain protein [Desulfitobacterium
metallireducens DSM 15288]
Length = 47
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Query: 59 VREGETLHTISEKCGDPY--IVEQNPHINDPDDVFPGLVIKI 98
VR GE+LH I+++ G ++ NPHI +P+ ++PG I+I
Sbjct: 5 VRRGESLHKIAKRYGTTVHCLIRINPHIYNPNLIYPGQKIQI 46
>gi|83590119|ref|YP_430128.1| peptidoglycan-binding LysM [Moorella thermoacetica ATCC 39073]
gi|83573033|gb|ABC19585.1| Peptidoglycan-binding LysM [Moorella thermoacetica ATCC 39073]
Length = 307
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 49 VNKPCDEIYVVREGETLHTISEKCGDPY--IVEQNPHINDPDDVFPG--LVIKITP 100
V P IYVVR G+TL I+ G I+ NPHI DP+ ++PG L I + P
Sbjct: 135 VTCPNGFIYVVRPGDTLSGIASMFGTTVDQIMAANPHIKDPNLIYPGQRLCIPLIP 190
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 56 IYVVREGETLHTISEKCGDPY--IVEQNPHINDPDDVFPGLVIKI 98
+Y V+ G+T++TI++K ++ NP I DP+ ++PG V+ I
Sbjct: 85 LYTVQPGDTMYTIAQKFNVSLDALIAANPQIKDPNLIYPGQVLCI 129
>gi|389721249|ref|ZP_10188003.1| LysM domain-containing protein [Acinetobacter sp. HA]
gi|388609079|gb|EIM38273.1| LysM domain-containing protein [Acinetobacter sp. HA]
Length = 384
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 11/91 (12%)
Query: 25 MLVLSCCESSDSGGFMGQVTQP-RNVNKP-----CDEIYVVREGETLHTISEKCGD---- 74
ML L+ C G P RNVN P +YVV++G+TL IS++
Sbjct: 20 MLALAVCVGVGMGTISTTHAAPARNVNPPSLKASAPNVYVVKKGDTLWDISKRFLKNPVR 79
Query: 75 -PYIVEQNPHINDPDDVFPGLVIKITPFKNR 104
P I N H+ +P +FPG + + ++ R
Sbjct: 80 WPEIWAGNKHVKNPHWIFPGDRLLMCDYQGR 110
>gi|398809361|ref|ZP_10568211.1| membrane-bound metallopeptidase [Variovorax sp. CF313]
gi|398085836|gb|EJL76478.1| membrane-bound metallopeptidase [Variovorax sp. CF313]
Length = 242
Score = 38.5 bits (88), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 13/86 (15%)
Query: 16 WHCALFMAIMLVLSCCESSDSGGFMGQVTQPRNVNKPCDEIYVVREGETLHTISEKCG-D 74
W + + L+++ C +S G P + YVV+ G+TL+ I+ K G
Sbjct: 8 WRAGIALTAALMVAACSTSPKAPVAG----------PGE--YVVQPGDTLYRIASKAGRS 55
Query: 75 PYIVEQNPHINDPDDVFPGLVIKITP 100
P V + ++ DPD + G V+++ P
Sbjct: 56 PGEVARWNNLQDPDRLEAGQVLRVVP 81
>gi|424745942|ref|ZP_18174201.1| LysM domain protein [Acinetobacter baumannii WC-141]
gi|422941761|gb|EKU36826.1| LysM domain protein [Acinetobacter baumannii WC-141]
Length = 157
Score = 38.5 bits (88), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 6/54 (11%)
Query: 51 KPCDEIYVVREGETLHTISEKC-GD----PYIVEQN-PHINDPDDVFPGLVIKI 98
+P + Y V+ G+ L I+++ GD P I E N P + DPD++FPG V++I
Sbjct: 102 EPESKFYTVKSGDNLSKIAKEVYGDANQYPKIFEANKPMLKDPDEIFPGQVLRI 155
>gi|296133213|ref|YP_003640460.1| peptidoglycan-binding lysin domain-containing protein
[Thermincola potens JR]
gi|296031791|gb|ADG82559.1| Peptidoglycan-binding lysin domain protein [Thermincola potens
JR]
Length = 90
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%), Gaps = 6/46 (13%)
Query: 57 YVVREGETLHTISEKCG----DPYIVEQNPHINDPDDVFPGLVIKI 98
YVV+ G+TL+ I+++ G D I+ NP I DP+ +FPG VI I
Sbjct: 3 YVVKPGDTLYIIAQRFGVTVAD--ILAVNPQIRDPNLIFPGQVIII 46
>gi|299771347|ref|YP_003733373.1| LysM domain/BON superfamily protein [Acinetobacter oleivorans DR1]
gi|298701435|gb|ADI92000.1| LysM domain/BON superfamily protein [Acinetobacter oleivorans DR1]
Length = 157
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 6/54 (11%)
Query: 51 KPCDEIYVVREGETLHTIS-EKCGD----PYIVEQN-PHINDPDDVFPGLVIKI 98
+P + Y V+ G+ L I+ E GD P I E N P + DPD++FPG V++I
Sbjct: 102 EPESKFYTVKSGDNLSKIAKEFYGDANQYPKIFEANKPMLKDPDEIFPGQVLRI 155
>gi|120437751|ref|YP_863437.1| LysM domain/BON superfamily protein [Gramella forsetii KT0803]
gi|117579901|emb|CAL68370.1| peptidoglycan-binding LysM domain containing protein [Gramella
forsetii KT0803]
Length = 162
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 47/99 (47%), Gaps = 15/99 (15%)
Query: 15 AWHCALFMAIMLVLSCCESSDSGGFMGQVTQPRNVN--KPCDEIYVVREGETLHTIS-EK 71
A A I+LV+ E + QV +V +P + V G+TL IS E
Sbjct: 70 ALDQATREKIILVVGNSEG------IAQVDDKMDVENTEPEAVFHTVERGDTLSKISKEH 123
Query: 72 CGDP----YIVEQN-PHINDPDDVFPGLVIKITPFK-NR 104
GDP I E N P + DPD ++PG V++I P + NR
Sbjct: 124 YGDPNQYPLIFEANKPMLQDPDKIYPGQVLRIPPMEANR 162
>gi|262280075|ref|ZP_06057860.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
gi|262260426|gb|EEY79159.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
Length = 157
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 6/54 (11%)
Query: 51 KPCDEIYVVREGETLHTIS-EKCGD----PYIVEQN-PHINDPDDVFPGLVIKI 98
+P + Y V+ G+ L I+ E GD P I E N P + DPD++FPG V++I
Sbjct: 102 EPESKFYTVKSGDNLSKIAKEFYGDANQYPKIFEANKPMLKDPDEIFPGQVLRI 155
>gi|260550962|ref|ZP_05825167.1| LysM domain-containing protein [Acinetobacter sp. RUH2624]
gi|424056726|ref|ZP_17794243.1| hypothetical protein W9I_00052 [Acinetobacter nosocomialis Ab22222]
gi|425740252|ref|ZP_18858426.1| LysM domain protein [Acinetobacter baumannii WC-487]
gi|445432712|ref|ZP_21439385.1| LysM domain protein [Acinetobacter baumannii OIFC021]
gi|260405910|gb|EEW99397.1| LysM domain-containing protein [Acinetobacter sp. RUH2624]
gi|407440259|gb|EKF46776.1| hypothetical protein W9I_00052 [Acinetobacter nosocomialis Ab22222]
gi|425495019|gb|EKU61209.1| LysM domain protein [Acinetobacter baumannii WC-487]
gi|444758050|gb|ELW82552.1| LysM domain protein [Acinetobacter baumannii OIFC021]
Length = 157
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 6/54 (11%)
Query: 51 KPCDEIYVVREGETLHTIS-EKCGD----PYIVEQN-PHINDPDDVFPGLVIKI 98
+P + Y V+ G+ L I+ E GD P I E N P + DPD++FPG V++I
Sbjct: 102 EPESKFYTVKSGDNLSKIAKEFYGDANQYPKIFEANKPMLKDPDEIFPGQVLRI 155
>gi|116251881|ref|YP_767719.1| transmembrane protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115256529|emb|CAK07614.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 281
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 40/93 (43%), Gaps = 10/93 (10%)
Query: 6 STTELAEKIAWH----------CALFMAIMLVLSCCESSDSGGFMGQVTQPRNVNKPCDE 55
S + L+ +I W AL + + L+ S E+ F+G V + +V P D+
Sbjct: 98 SPSFLSRQIRWSRRRLARDAVVVALIVMVGLLYSVFETGPVQSFLGTVGKSSHVMGPVDQ 157
Query: 56 IYVVREGETLHTISEKCGDPYIVEQNPHINDPD 88
+ V +G+T+H E+ G + P P
Sbjct: 158 AFTVTDGDTVHVAGERAGTRLVGFNTPEKFSPQ 190
>gi|433444140|ref|ZP_20409150.1| spore coat assembly protein SafA [Anoxybacillus flavithermus
TNO-09.006]
gi|432001788|gb|ELK22657.1| spore coat assembly protein SafA [Anoxybacillus flavithermus
TNO-09.006]
Length = 318
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 33/46 (71%), Gaps = 2/46 (4%)
Query: 55 EIYVVREGETLHTISEKCGDPY--IVEQNPHINDPDDVFPGLVIKI 98
+I++V++G+TL I+EK G + + + N H++DPD + PG+ IK+
Sbjct: 2 KIHIVQKGDTLWKIAEKYGVDFEELKKMNAHLSDPDYIMPGMKIKV 47
>gi|435854190|ref|YP_007315509.1| LysM domain-containing protein [Halobacteroides halobius DSM
5150]
gi|433670601|gb|AGB41416.1| LysM domain-containing protein [Halobacteroides halobius DSM
5150]
Length = 199
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Query: 57 YVVREGETLHTISEKCGDPY--IVEQNPHINDPDDVFPGLVIKI 98
Y V+ G+T++ I++ ++E NPHI DPD +FPG V+ I
Sbjct: 21 YTVQPGDTMYFIAQTFDTTLNQLIEANPHIEDPDRIFPGDVLCI 64
>gi|333983126|ref|YP_004512336.1| peptidoglycan-binding lysin domain-containing protein [Methylomonas
methanica MC09]
gi|333807167|gb|AEF99836.1| Peptidoglycan-binding lysin domain protein [Methylomonas methanica
MC09]
Length = 154
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 14/103 (13%)
Query: 5 SSTTELAEKIAWHCALFMAIMLVLSCCESSDSGGFMGQVT---QPRNVNKPCDEIYVVRE 61
+ + E A+K + V++ + D GG T +P+NV E Y+++
Sbjct: 54 TRSAEAAQKAVLMAGNIKGVSEVVAKIDIVDDGGTGVDATAALEPQNV-----EYYLIQS 108
Query: 62 GETLHTISEKC---GDPY--IVEQNPH-INDPDDVFPGLVIKI 98
G++L I++K G+ Y I E N I DPD +FPG I+I
Sbjct: 109 GDSLSKIAKKYYGNGNDYPKIFEANREVIKDPDLIFPGQKIRI 151
>gi|389694521|ref|ZP_10182615.1| putative phospholipid-binding protein,LysM domain-containing
protein [Microvirga sp. WSM3557]
gi|388587907|gb|EIM28200.1| putative phospholipid-binding protein,LysM domain-containing
protein [Microvirga sp. WSM3557]
Length = 148
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 12/68 (17%)
Query: 42 QVTQPRNVNKPCDEIYVVREGETLHTISEK-----CGDPY--IVEQN-PHINDPDDVFPG 93
QV QP + +Y V++G+TL I+EK G Y IV+ N P + DPD + PG
Sbjct: 84 QVQQPAQAST----MYTVQKGDTLWEIAEKHYGKGKGAKYTEIVKANSPPVKDPDMIQPG 139
Query: 94 LVIKITPF 101
V++I P
Sbjct: 140 WVLRIPPL 147
>gi|304316806|ref|YP_003851951.1| spore coat assembly protein SafA [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|433654949|ref|YP_007298657.1| spore coat assembly protein SafA [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|302778308|gb|ADL68867.1| spore coat assembly protein SafA [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|433293138|gb|AGB18960.1| spore coat assembly protein SafA [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 120
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 53 CDEIYVVREGETLHTISEKCGDPY--IVEQNPHINDPDDVFPGLVIKI 98
C E+Y+VR G+++ TI+ G P ++ NP I +P+ ++PG I I
Sbjct: 68 CREMYIVRPGDSMWTIANMYGIPLDCLIRANPQIPNPNLIYPGQQICI 115
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 53 CDEIYVVREGETLHTISEKCGDPY--IVEQNPHINDPDDVFPGLVIKITPF 101
C Y+VR G+++ TI+ G P ++ NP I +P+ ++PG I I F
Sbjct: 11 CRTTYIVRPGDSMWTIANMYGIPLDCLIRANPQIPNPNLIYPGQQICIPAF 61
>gi|333897060|ref|YP_004470934.1| spore coat assembly protein SafA [Thermoanaerobacterium
xylanolyticum LX-11]
gi|333112325|gb|AEF17262.1| spore coat assembly protein SafA [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 120
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 53 CDEIYVVREGETLHTISEKCGDPY--IVEQNPHINDPDDVFPGLVIKI 98
C E+Y+VR G+++ TI+ G P ++ NP I +P+ ++PG I I
Sbjct: 68 CREMYIVRPGDSMWTIANMYGIPLDCLIRANPQIPNPNLIYPGQQICI 115
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 53 CDEIYVVREGETLHTISEKCGDPY--IVEQNPHINDPDDVFPGLVIKITPF 101
C Y VR G+++ TI+ G P ++ NP I +P+ ++PG I I +
Sbjct: 11 CRTTYTVRPGDSMWTIANMFGIPLDCLIRANPQIPNPNLIYPGQQICIPAY 61
>gi|390934982|ref|YP_006392487.1| spore coat assembly protein SafA [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389570483|gb|AFK86888.1| spore coat assembly protein SafA [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 120
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 53 CDEIYVVREGETLHTISEKCGDPY--IVEQNPHINDPDDVFPGLVIKI 98
C E+Y+VR G+++ TI+ G P ++ NP I +P+ ++PG I I
Sbjct: 68 CREMYIVRPGDSMWTIANMYGIPLDCLIRANPQIPNPNLIYPGQQICI 115
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 53 CDEIYVVREGETLHTISEKCGDPY--IVEQNPHINDPDDVFPGLVIKITPF 101
C Y+VR G+++ TI+ G P ++ NP I +P+ ++PG I I +
Sbjct: 11 CRTTYIVRPGDSMWTIANMFGIPLDCLIRANPQIPNPNLIYPGQQICIPAY 61
>gi|345869605|ref|ZP_08821562.1| Peptidoglycan-binding lysin domain protein [Thiorhodococcus
drewsii AZ1]
gi|343922988|gb|EGV33685.1| Peptidoglycan-binding lysin domain protein [Thiorhodococcus
drewsii AZ1]
Length = 397
Score = 38.1 bits (87), Expect = 0.68, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 32/50 (64%), Gaps = 5/50 (10%)
Query: 55 EIYVVREGETLHTISEK-CGDPY----IVEQNPHINDPDDVFPGLVIKIT 99
+ YVVR G+TL I+ + DP+ + + NP + DPD ++PG V+++T
Sbjct: 36 QTYVVRSGDTLWDIAGRFLRDPWLWPEVWQANPGVGDPDLIYPGDVLELT 85
>gi|403379245|ref|ZP_10921302.1| peptidoglycan-binding LysM [Paenibacillus sp. JC66]
Length = 731
Score = 38.1 bits (87), Expect = 0.70, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Query: 56 IYVVREGETLHTISEKCGDPY--IVEQNPHINDPDDVFPGLVIKI 98
I++V++G+TL+ +S+K P ++E NP I DPD + G+ +K+
Sbjct: 3 IHIVKKGDTLYQLSKKYNVPLDKLIEMNPQIADPDKLDIGMKVKV 47
>gi|354559573|ref|ZP_08978820.1| Xanthine dehydrogenase [Desulfitobacterium metallireducens DSM
15288]
gi|353541210|gb|EHC10679.1| Xanthine dehydrogenase [Desulfitobacterium metallireducens DSM
15288]
Length = 397
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Query: 57 YVVREGETLHTISEKCGDPY--IVEQNPHINDPDDVFPGLVIKI 98
Y ++ G++ + I++K P ++ NP I+DP+ +FPG +I I
Sbjct: 178 YTIQPGDSFYIIAQKYNIPLNELIRANPQIDDPEHIFPGQIINI 221
>gi|374297465|ref|YP_005047656.1| spore coat assembly protein SafA/uncharacterized protein, YkwD
family [Clostridium clariflavum DSM 19732]
gi|359826959|gb|AEV69732.1| spore coat assembly protein SafA/uncharacterized protein, YkwD
family [Clostridium clariflavum DSM 19732]
Length = 203
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 54 DEIYVVREGETLHTISEK--CGDPYIVEQNPHINDPDDVFPGLVIKI 98
+ Y+V+ G+T+ I+ K G I+ NP I +PD ++PG I I
Sbjct: 23 SQTYIVKPGDTMWKIASKFQVGTSEIIAANPQIKNPDLIYPGQKITI 69
>gi|86159123|ref|YP_465908.1| peptidoglycan-binding LysM [Anaeromyxobacter dehalogenans 2CP-C]
gi|85775634|gb|ABC82471.1| peptidoglycan-binding LysM [Anaeromyxobacter dehalogenans 2CP-C]
Length = 440
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Query: 55 EIYVVREGETLHTISEKCGD-----PYIVEQNPHINDPDDVFPGLVIKITPFKN 103
E Y VREG+TL IS + P I NP I +P ++PG +++ PF +
Sbjct: 96 ETYTVREGDTLWDISGRFLSNPWYWPKIWSYNPEITNPHWIYPGNLLRFYPFAD 149
>gi|359429008|ref|ZP_09220036.1| putative mannose-binding protein [Acinetobacter sp. NBRC 100985]
gi|358235589|dbj|GAB01575.1| putative mannose-binding protein [Acinetobacter sp. NBRC 100985]
Length = 157
Score = 37.7 bits (86), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 6/54 (11%)
Query: 51 KPCDEIYVVREGETLHTIS-EKCGD----PYIVEQN-PHINDPDDVFPGLVIKI 98
+P + Y V+ G+ L IS E GD P I E N P + PD++FPG V++I
Sbjct: 102 EPESKFYTVKSGDNLSKISKEMYGDANQYPKIFEANKPMLKSPDEIFPGQVLRI 155
>gi|260913097|ref|ZP_05919579.1| LysM/phospholipid-binding domain protein [Pasteurella dagmatis ATCC
43325]
gi|260632684|gb|EEX50853.1| LysM/phospholipid-binding domain protein [Pasteurella dagmatis ATCC
43325]
Length = 147
Score = 37.7 bits (86), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
Query: 54 DEIYVVREGETLHTISEKC---GDPY--IVEQNPH-INDPDDVFPGLVIKI 98
DE YV+++G+TL I+EK G Y IV+ N I D D +FPG I++
Sbjct: 93 DEFYVIQKGDTLWKIAEKTYGNGAKYTAIVDANKEVIKDADKIFPGQKIRL 143
>gi|254362289|ref|ZP_04978402.1| possible LysM domain protein [Mannheimia haemolytica PHL213]
gi|261492796|ref|ZP_05989343.1| putative LysM domain protein [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261494838|ref|ZP_05991316.1| putative LysM domain protein [Mannheimia haemolytica serotype A2
str. OVINE]
gi|452746012|ref|ZP_21945844.1| LysM domain/BON superfamily protein [Mannheimia haemolytica
serotype 6 str. H23]
gi|153093866|gb|EDN74798.1| possible LysM domain protein [Mannheimia haemolytica PHL213]
gi|261309549|gb|EEY10774.1| putative LysM domain protein [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261311478|gb|EEY12634.1| putative LysM domain protein [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|452086151|gb|EME02542.1| LysM domain/BON superfamily protein [Mannheimia haemolytica
serotype 6 str. H23]
Length = 147
Score = 37.7 bits (86), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 7/64 (10%)
Query: 42 QVTQPRNVNKPCD-EIYVVREGETLHTISEKC---GDPY--IVEQNPH-INDPDDVFPGL 94
+VT P +V D E+YV+++G+TL I+ K G Y IVE N I D + +FPG
Sbjct: 80 EVTLPDDVQLASDDELYVIQKGDTLWEIATKAYGNGAKYKAIVEANKEVIKDENKIFPGQ 139
Query: 95 VIKI 98
I+I
Sbjct: 140 KIRI 143
>gi|392377473|ref|YP_004984632.1| conserved protein of unknown function [Azospirillum brasilense
Sp245]
gi|356878954|emb|CCC99848.1| conserved protein of unknown function [Azospirillum brasilense
Sp245]
Length = 161
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 12/108 (11%)
Query: 4 ASSTTELAEKIAWHCALFMAIMLV---LSCCESSDSGGFMGQVTQPRNVNKPCDE--IYV 58
++++ E EKIA + V + S G Q T P +P + +
Sbjct: 54 SAASQEEKEKIAVALGNVKGVSRVDDQTAVIAKDQSAGGPDQPTVPP-TEQPASQTQFHT 112
Query: 59 VREGETLHTISEKC-GDP----YIVEQN-PHINDPDDVFPGLVIKITP 100
V +G+TL I++K GDP I E N P + DP+ ++PG V++I P
Sbjct: 113 VEKGDTLSAIAKKVYGDPNRYNAIFEANKPMLKDPNKIYPGQVLRIPP 160
>gi|421262280|ref|ZP_15713569.1| LysM domain/BON superfamily protein [Pasteurella multocida subsp.
multocida str. Anand1_cattle]
gi|401689657|gb|EJS85050.1| LysM domain/BON superfamily protein [Pasteurella multocida subsp.
multocida str. Anand1_cattle]
Length = 147
Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 54 DEIYVVREGETLHTISEKC---GDPY--IVEQNPH-INDPDDVFPGLVIKI 98
DE YV+++G+TL I+EK G Y IVE N I D +FPG I++
Sbjct: 93 DEFYVIQKGDTLWKIAEKTYGNGSKYTAIVEANKEVIKDAXKIFPGQKIRL 143
>gi|119900059|ref|YP_935272.1| LysM domain/BON superfamily protein [Azoarcus sp. BH72]
gi|119672472|emb|CAL96386.1| conserved hypothetical protein [Azoarcus sp. BH72]
Length = 164
Score = 37.7 bits (86), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 6/57 (10%)
Query: 50 NKPCDEIYVVREGETLHTISEK-CGDP----YIVEQN-PHINDPDDVFPGLVIKITP 100
++P Y V G+TL IS+K GD I E N P ++ PD ++PG V++I P
Sbjct: 106 SEPAATFYTVARGDTLSAISKKHYGDANKYQKIFEANRPMLSHPDKIYPGQVLRIPP 162
>gi|392963822|ref|ZP_10329243.1| Peptidoglycan-binding lysin domain protein [Fibrisoma limi BUZ 3]
gi|387846717|emb|CCH51287.1| Peptidoglycan-binding lysin domain protein [Fibrisoma limi BUZ 3]
Length = 157
Score = 37.7 bits (86), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Query: 52 PCDEIYVVREGETLHTISEKC-GDPY----IVEQN-PHINDPDDVFPGLVIKI 98
P + Y V+EG+TL IS++ GDP I E N P + DPD ++P V++I
Sbjct: 102 PEGKYYTVKEGDTLSKISKEVYGDPMKYGIIFEANKPMLKDPDLIYPNQVLRI 154
>gi|148910787|gb|ABR18460.1| unknown [Picea sitchensis]
Length = 777
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 33/51 (64%), Gaps = 5/51 (9%)
Query: 51 KPCDEIYVVREGETLHTISEKCGDPY---IVEQNPHINDPDDVFPGLVIKI 98
KP D + V++G+TL IS++ G +V+ NP IN+PD ++PG +K+
Sbjct: 728 KPKD--FEVKKGDTLSQISKRVGKSSWKELVQLNPEINNPDLIYPGDRLKL 776
>gi|387771233|ref|ZP_10127399.1| LysM domain protein [Pasteurella bettyae CCUG 2042]
gi|386902438|gb|EIJ67278.1| LysM domain protein [Pasteurella bettyae CCUG 2042]
Length = 147
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
Query: 54 DEIYVVREGETLHTISEKC---GDPY--IVEQNPH-INDPDDVFPGLVIKI 98
DE YV+++G+TL I+EK G Y IVE N I D + +FPG I++
Sbjct: 93 DEFYVIQKGDTLWAIAEKYYGNGAKYKAIVEANKEVIKDENKIFPGQKIRV 143
>gi|410663443|ref|YP_006915814.1| hemagglutination activity domain-containing protein [Simiduia
agarivorans SA1 = DSM 21679]
gi|409025800|gb|AFU98084.1| hemagglutination activity domain-containing protein [Simiduia
agarivorans SA1 = DSM 21679]
Length = 4178
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 5/56 (8%)
Query: 54 DEIYVVREGETLHTISEK-CGDPY----IVEQNPHINDPDDVFPGLVIKITPFKNR 104
++ Y V EG+TL I+ K DP+ + +QNP I +PD ++ G VIK+ K +
Sbjct: 4084 EQSYQVIEGDTLWDIANKFLKDPFRWKELWQQNPGIKNPDKIYIGDVIKVIVIKGK 4139
>gi|444337358|ref|ZP_21151347.1| XkdP protein [Aggregatibacter actinomycetemcomitans serotype b str.
SCC4092]
gi|443547058|gb|ELT56624.1| XkdP protein [Aggregatibacter actinomycetemcomitans serotype b str.
SCC4092]
Length = 109
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 54 DEIYVVREGETLHTISEK---CGDPY--IVEQNPH-INDPDDVFPGLVIKI 98
DE YV+++G+TL I+EK G Y IV N I D D +FPG I++
Sbjct: 55 DEFYVIQKGDTLWKIAEKHYRNGSKYTAIVAANKEVIKDADKIFPGQKIRL 105
>gi|297570916|ref|YP_003696690.1| peptidoglycan-binding lysin domain protein [Arcanobacterium
haemolyticum DSM 20595]
gi|296931263|gb|ADH92071.1| Peptidoglycan-binding lysin domain protein [Arcanobacterium
haemolyticum DSM 20595]
Length = 129
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 14/78 (17%)
Query: 38 GFMGQVTQPRNVNKPCDEIYVVREGETLHTISEKCGDPY------------IVEQNPHIN 85
+T+PR +++ I+ ++ G++L +I+EK PY IV NP I+
Sbjct: 52 SLRAHITKPRVLDE-QTSIFTIQPGDSLWSIAEKIA-PYSSPTETASLVKRIVAANPQIS 109
Query: 86 DPDDVFPGLVIKITPFKN 103
DP ++PG I + P +
Sbjct: 110 DPQLLYPGQQIILPPVER 127
>gi|416064375|ref|ZP_11581675.1| XkdP protein [Aggregatibacter actinomycetemcomitans serotype e str.
SCC393]
gi|444335076|ref|ZP_21150424.1| XkdP protein [Aggregatibacter actinomycetemcomitans serotype a str.
A160]
gi|347995986|gb|EGY37116.1| XkdP protein [Aggregatibacter actinomycetemcomitans serotype e str.
SCC393]
gi|443549506|gb|ELT58277.1| XkdP protein [Aggregatibacter actinomycetemcomitans serotype a str.
A160]
Length = 109
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 54 DEIYVVREGETLHTISEK---CGDPY--IVEQNPH-INDPDDVFPGLVIKI 98
DE YV+++G+TL I+EK G Y IV N I D D +FPG I++
Sbjct: 55 DEFYVIQKGDTLWKIAEKHYGNGSKYTAIVAANKEVIKDADKIFPGQKIRL 105
>gi|410629062|ref|ZP_11339775.1| lipoprotein NlpD [Glaciecola mesophila KMM 241]
gi|410151326|dbj|GAC26544.1| lipoprotein NlpD [Glaciecola mesophila KMM 241]
Length = 272
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 20 LFMAIMLVLSCCESSDSGGFMGQVTQP---RNVNKPC--DEIYVVREGETLHTISEKCGD 74
L ++ ++++ C S + + ++ Q R+V K Y V +G+TL+TIS K G
Sbjct: 8 LILSFSILITACSSRKAPAPIVEIYQGKTFRDVKKSSYSAHTYTVEKGDTLYTISWKSGQ 67
Query: 75 PY--IVEQNPHINDPDDVFPG--LVIKITP 100
Y I + N I P ++FPG L +K +P
Sbjct: 68 DYRDIAKLN-GIRPPYNIFPGQRLTLKNSP 96
>gi|294649557|ref|ZP_06726977.1| LysM domain protein [Acinetobacter haemolyticus ATCC 19194]
gi|292824544|gb|EFF83327.1| LysM domain protein [Acinetobacter haemolyticus ATCC 19194]
Length = 157
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 6/54 (11%)
Query: 51 KPCDEIYVVREGETLHTIS-EKCGDP----YIVEQN-PHINDPDDVFPGLVIKI 98
+P + Y V+ G+ L IS E GDP I E N P + + DD+FPG V++I
Sbjct: 102 EPESKFYTVKSGDNLSKISKEYYGDPNQYNKIFEANRPLLKNADDIFPGQVLRI 155
>gi|406040195|ref|ZP_11047550.1| LysM domain/BON superfamily protein [Acinetobacter ursingii DSM
16037 = CIP 107286]
Length = 155
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 6/54 (11%)
Query: 51 KPCDEIYVVREGETLHTIS-EKCGDP----YIVEQN-PHINDPDDVFPGLVIKI 98
+P + Y V+ G+ L IS E GDP I E N P + D DD++PG V++I
Sbjct: 100 EPESKFYTVKSGDNLSKISKEYYGDPNQYNKIFEANKPLLKDADDIYPGQVLRI 153
>gi|436834343|ref|YP_007319559.1| Peptidoglycan-binding lysin domain protein [Fibrella aestuarina BUZ
2]
gi|384065756|emb|CCG98966.1| Peptidoglycan-binding lysin domain protein [Fibrella aestuarina BUZ
2]
Length = 158
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 6/54 (11%)
Query: 51 KPCDEIYVVREGETLHTISEKC-GDPY----IVEQN-PHINDPDDVFPGLVIKI 98
+P + + V EG+TL IS+K GDP I E N P + PD ++PG V++I
Sbjct: 102 EPEGQFHTVEEGDTLSAISKKVYGDPMKYGIIFEANKPMLKSPDLIYPGQVLRI 155
>gi|342903365|ref|ZP_08725176.1| putative peptidoglycan-binding lysin domain-containing protein
[Haemophilus haemolyticus M21621]
gi|341955469|gb|EGT81925.1| putative peptidoglycan-binding lysin domain-containing protein
[Haemophilus haemolyticus M21621]
Length = 109
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
Query: 54 DEIYVVREGETLHTISEKC---GDPY--IVEQNPH-INDPDDVFPGLVIKI 98
DE YV+++G+TL I+EK G+ Y IV N I D D +FPG I++
Sbjct: 55 DEFYVIQKGDTLWKIAEKHYGDGNKYTAIVTANKEVIKDADKIFPGQKIRL 105
>gi|402757627|ref|ZP_10859883.1| LysM domain/BON superfamily protein [Acinetobacter sp. NCTC 7422]
Length = 157
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 6/54 (11%)
Query: 51 KPCDEIYVVREGETLHTIS-EKCGDP----YIVEQN-PHINDPDDVFPGLVIKI 98
+P + Y V+ G+ L IS E GDP I E N P + + DD+FPG V++I
Sbjct: 102 EPESKFYTVKSGDNLSKISKEYYGDPNQYNKIFEANRPLLKNADDIFPGQVLRI 155
>gi|50084084|ref|YP_045594.1| LysM domain/BON superfamily protein [Acinetobacter sp. ADP1]
gi|49530060|emb|CAG67772.1| conserved hypothetical protein; putative peptidoglycan-binding LysM
[Acinetobacter sp. ADP1]
Length = 158
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 6/57 (10%)
Query: 51 KPCDEIYVVREGETLHTIS-EKCGDP----YIVEQN-PHINDPDDVFPGLVIKITPF 101
+P + Y V+ G+ L IS E GDP I E N P + D DD++PG V++I +
Sbjct: 101 EPESKFYTVKAGDNLSKISKEYYGDPNHYNKIFEANKPLLKDADDIYPGQVLRIPQY 157
>gi|375335511|ref|ZP_09776855.1| Peptidoglycan-binding LysM [Succinivibrionaceae bacterium WG-1]
Length = 354
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Query: 49 VNKPCDEIYVVREGETLHTISEKCGD-----PYIVEQNPHINDPDDVFPGLVIKI 98
VN+ + YVV++G+TL IS K P I NP INDP ++PG V+ +
Sbjct: 26 VNENHPQKYVVQKGDTLWDISAKFLKKPWYWPKIWNVNPQINDPHWIYPGDVLTL 80
>gi|425743539|ref|ZP_18861617.1| LysM domain protein [Acinetobacter baumannii WC-323]
gi|425493747|gb|EKU59973.1| LysM domain protein [Acinetobacter baumannii WC-323]
Length = 157
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 6/54 (11%)
Query: 51 KPCDEIYVVREGETLHTIS-EKCGDP----YIVEQN-PHINDPDDVFPGLVIKI 98
+P + Y V+ G+ L IS E GDP I E N P + + DD+FPG V++I
Sbjct: 102 EPESKFYTVKSGDNLSKISKEYYGDPNQYNKIFEANRPLLKNADDIFPGQVLRI 155
>gi|226953454|ref|ZP_03823918.1| peptidoglycan-binding LysM [Acinetobacter sp. ATCC 27244]
gi|226835796|gb|EEH68179.1| peptidoglycan-binding LysM [Acinetobacter sp. ATCC 27244]
Length = 157
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 6/54 (11%)
Query: 51 KPCDEIYVVREGETLHTIS-EKCGDP----YIVEQN-PHINDPDDVFPGLVIKI 98
+P + Y V+ G+ L IS E GDP I E N P + + DD+FPG V++I
Sbjct: 102 EPESKFYTVKSGDNLSKISKEYYGDPNQYNKIFEANRPLLKNADDIFPGQVLRI 155
>gi|348030325|ref|YP_004873011.1| lipoprotein NlpD [Glaciecola nitratireducens FR1064]
gi|347947668|gb|AEP31018.1| putative lipoprotein NlpD [Glaciecola nitratireducens FR1064]
Length = 281
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 24 IMLVLSCCESSDSG---GFMGQVTQPRNVNKPCDEIYVVREGETLHTISEKCGDPYI-VE 79
ML++SC S+ + + N+ + E Y V++G+TL ++ G+ Y +
Sbjct: 22 FMLIVSCSGRSNPAPVVSLNTTIAKQNNLTEIEGETYQVQKGDTLFAVAFYSGNDYRDIA 81
Query: 80 QNPHINDPDDVFPGLVIKITP 100
+ +I P ++FPG + +TP
Sbjct: 82 KFNNIQAPYNIFPGQTLALTP 102
>gi|148265711|ref|YP_001232417.1| peptidoglycan-binding LysM [Geobacter uraniireducens Rf4]
gi|146399211|gb|ABQ27844.1| Peptidoglycan-binding LysM [Geobacter uraniireducens Rf4]
Length = 340
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 5/50 (10%)
Query: 56 IYVVREGETLHTISEK-CGDPY----IVEQNPHINDPDDVFPGLVIKITP 100
+YV+++G+TL +SEK DPY + +N I +P +FPG +K+ P
Sbjct: 29 VYVIQKGDTLWGLSEKFLQDPYYWPNLWARNQSITNPHFIFPGQRLKVYP 78
>gi|20808596|ref|NP_623767.1| LysM repeat-containing protein [Thermoanaerobacter tengcongensis
MB4]
gi|254479061|ref|ZP_05092416.1| LysM domain protein [Carboxydibrachium pacificum DSM 12653]
gi|20517226|gb|AAM25371.1| LysM-repeat proteins and domains [Thermoanaerobacter tengcongensis
MB4]
gi|214035017|gb|EEB75736.1| LysM domain protein [Carboxydibrachium pacificum DSM 12653]
Length = 324
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 55 EIYVVREGETLHTISEKCGDPY--IVEQNPHINDPDDVFPGLVIKI 98
++Y+V+ GE+L TI++K I++ NP I DP+ ++PG I I
Sbjct: 254 KVYIVKPGESLWTIAQKFNTTVEAILKANPEIKDPNLIYPGQRIII 299
>gi|212638550|ref|YP_002315070.1| LysM domain-containing protein [Anoxybacillus flavithermus WK1]
gi|212560030|gb|ACJ33085.1| LysM domain containing protein [Anoxybacillus flavithermus WK1]
Length = 310
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 33/46 (71%), Gaps = 2/46 (4%)
Query: 55 EIYVVREGETLHTISEKCGDPY--IVEQNPHINDPDDVFPGLVIKI 98
+I++V++G+TL I+EK G + + + N H++DP+ + PG+ IK+
Sbjct: 2 KIHIVQKGDTLWKIAEKYGVDFEELKKMNAHLSDPNYIMPGMKIKV 47
>gi|334702672|ref|ZP_08518538.1| LysM domain-containing protein [Aeromonas caviae Ae398]
Length = 362
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 8/79 (10%)
Query: 26 LVLSCCESSDSGGFMGQVTQPRNVNKPCDEIYVVREGETLHTIS-EKCGDPYIVEQ---- 80
+V++C ++ +GG M Q + E YVV++G+TL IS + +P++ +
Sbjct: 6 IVVACLATALAGGAMAQQL---TLKSGYPETYVVQKGDTLWDISGQYLAEPWLWPRLWNI 62
Query: 81 NPHINDPDDVFPGLVIKIT 99
NP I +P ++PG V+ ++
Sbjct: 63 NPQIANPHWIYPGDVLHLS 81
>gi|54295433|ref|YP_127848.1| hypothetical protein lpl2519 [Legionella pneumophila str. Lens]
gi|53755265|emb|CAH16759.1| hypothetical protein lpl2519 [Legionella pneumophila str. Lens]
Length = 345
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 32/52 (61%), Gaps = 5/52 (9%)
Query: 57 YVVREGETLHTISEK-CGDPY----IVEQNPHINDPDDVFPGLVIKITPFKN 103
YVV+ G+TL +IS + +P+ + NP I +PD ++PG V+ + ++N
Sbjct: 29 YVVQPGDTLWSISSRFLNNPWEWKALWRANPQIQNPDRLYPGAVLALEYYQN 80
>gi|39997646|ref|NP_953597.1| LysM domain-containing protein [Geobacter sulfurreducens PCA]
gi|409913000|ref|YP_006891465.1| LysM domain-containing protein [Geobacter sulfurreducens KN400]
gi|39984538|gb|AAR35924.1| LysM domain protein [Geobacter sulfurreducens PCA]
gi|307635051|gb|ADI85309.2| LysM domain protein [Geobacter sulfurreducens KN400]
Length = 335
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 32/50 (64%), Gaps = 5/50 (10%)
Query: 56 IYVVREGETLHTISEK-CGDPY----IVEQNPHINDPDDVFPGLVIKITP 100
+YV+++G+TL +SE+ DPY + +NP I +P ++PG +++ P
Sbjct: 32 VYVIQKGDTLWGLSERFLKDPYYWPNLWARNPAIGNPHFIYPGQRVRVYP 81
>gi|262373281|ref|ZP_06066560.1| LysM domain-containing protein [Acinetobacter junii SH205]
gi|406036930|ref|ZP_11044294.1| LysM domain/BON superfamily protein [Acinetobacter parvus DSM 16617
= CIP 108168]
gi|262313306|gb|EEY94391.1| LysM domain-containing protein [Acinetobacter junii SH205]
Length = 157
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 6/56 (10%)
Query: 49 VNKPCDEIYVVREGETLHTIS-EKCGDP----YIVEQN-PHINDPDDVFPGLVIKI 98
V +P + Y V+ G+ L IS E GDP I E N P + + DD+FPG V++I
Sbjct: 100 VPEPESKFYTVKSGDNLSKISKEYYGDPNRYNKIFEANRPLLKNADDIFPGQVLRI 155
>gi|445415618|ref|ZP_21434191.1| LysM domain protein [Acinetobacter sp. WC-743]
gi|444762853|gb|ELW87204.1| LysM domain protein [Acinetobacter sp. WC-743]
Length = 157
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 6/54 (11%)
Query: 51 KPCDEIYVVREGETLHTIS-EKCGDP----YIVEQN-PHINDPDDVFPGLVIKI 98
+P + Y V+ G+ L IS E GDP I E N P + + DD+FPG V++I
Sbjct: 102 EPESKFYTVKSGDNLSKISKEFYGDPNQYNKIFEANRPLLKNADDIFPGQVLRI 155
>gi|21244569|ref|NP_644151.1| hypothetical protein XAC3845 [Xanthomonas axonopodis pv. citri str.
306]
gi|21110246|gb|AAM38687.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
str. 306]
Length = 128
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 27 VLSCCESSDSGGFMGQVTQPRNVNKPCDEIYVVREGETLHTISEK-CGD----PYIVEQN 81
V S E + + F T ++ + +E V+ G++L +I+++ GD P I E N
Sbjct: 47 VDSTAEVTPAPDFSNVRTSVQSTAQLVEESVTVQAGDSLSSIAKRHLGDGNLWPRIFEAN 106
Query: 82 PH-INDPDDVFPGLVIKITP 100
+ DPD +FPG V+++ P
Sbjct: 107 RETLQDPDKIFPGQVLRLPP 126
>gi|385330655|ref|YP_005884606.1| peptidoglycan-binding LysM [Marinobacter adhaerens HP15]
gi|311693805|gb|ADP96678.1| peptidoglycan-binding LysM [Marinobacter adhaerens HP15]
Length = 705
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 57 YVVREGETLHTISEKCGDPY--IVEQNPHINDPDDVFPGLVIKI 98
Y VR G+TL I+++ ++ NP I +PD +FPG ++K+
Sbjct: 5 YTVRSGDTLSAIAQRHQTTLSSLMRLNPAIENPDRIFPGQLLKL 48
>gi|156933549|ref|YP_001437465.1| LysM domain/BON superfamily protein [Cronobacter sakazakii ATCC
BAA-894]
gi|389840583|ref|YP_006342667.1| LysM domain/BON superfamily protein [Cronobacter sakazakii ES15]
gi|417790517|ref|ZP_12438065.1| LysM domain/BON superfamily protein [Cronobacter sakazakii E899]
gi|424800024|ref|ZP_18225566.1| FIG00553508: hypothetical protein [Cronobacter sakazakii 696]
gi|429105077|ref|ZP_19166946.1| FIG00553508: hypothetical protein [Cronobacter malonaticus 681]
gi|429110743|ref|ZP_19172513.1| FIG00553508: hypothetical protein [Cronobacter malonaticus 507]
gi|429115985|ref|ZP_19176903.1| FIG00553508: hypothetical protein [Cronobacter sakazakii 701]
gi|449307871|ref|YP_007440227.1| LysM domain/BON superfamily protein [Cronobacter sakazakii SP291]
gi|156531803|gb|ABU76629.1| hypothetical protein ESA_01369 [Cronobacter sakazakii ATCC BAA-894]
gi|333955392|gb|EGL73146.1| LysM domain/BON superfamily protein [Cronobacter sakazakii E899]
gi|387851059|gb|AFJ99156.1| LysM domain/BON superfamily protein [Cronobacter sakazakii ES15]
gi|423235745|emb|CCK07436.1| FIG00553508: hypothetical protein [Cronobacter sakazakii 696]
gi|426291800|emb|CCJ93059.1| FIG00553508: hypothetical protein [Cronobacter malonaticus 681]
gi|426311900|emb|CCJ98626.1| FIG00553508: hypothetical protein [Cronobacter malonaticus 507]
gi|426319114|emb|CCK03016.1| FIG00553508: hypothetical protein [Cronobacter sakazakii 701]
gi|449097904|gb|AGE85938.1| LysM domain/BON superfamily protein [Cronobacter sakazakii SP291]
Length = 148
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Query: 52 PCDEIYVVREGETLHTISEKC-GD----PYIVEQN-PHINDPDDVFPGLVIKI 98
P + Y V++G+TL IS++ GD P I E N P + P+ ++PG V++I
Sbjct: 94 PESQFYTVKKGDTLSAISKEVYGDANQYPKIFEANKPMLTSPEKIYPGQVLRI 146
>gi|54298585|ref|YP_124954.1| hypothetical protein lpp2649 [Legionella pneumophila str. Paris]
gi|53752370|emb|CAH13802.1| hypothetical protein lpp2649 [Legionella pneumophila str. Paris]
Length = 345
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 32/52 (61%), Gaps = 5/52 (9%)
Query: 57 YVVREGETLHTISEK-CGDPY----IVEQNPHINDPDDVFPGLVIKITPFKN 103
YVV+ G+TL +IS + +P+ + NP I +PD ++PG V+ + ++N
Sbjct: 29 YVVQPGDTLWSISSRFLNNPWEWKALWRANPQIQNPDRLYPGAVLALEYYQN 80
>gi|261868660|ref|YP_003256582.1| LysM domain/BON superfamily protein [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|415769921|ref|ZP_11484536.1| XkdP protein [Aggregatibacter actinomycetemcomitans D17P-2]
gi|444345764|ref|ZP_21153770.1| XkdP protein [Aggregatibacter actinomycetemcomitans serotype c str.
AAS4A]
gi|261413992|gb|ACX83363.1| XkdP protein [Aggregatibacter actinomycetemcomitans D11S-1]
gi|348656954|gb|EGY74551.1| XkdP protein [Aggregatibacter actinomycetemcomitans D17P-2]
gi|443542497|gb|ELT52822.1| XkdP protein [Aggregatibacter actinomycetemcomitans serotype c str.
AAS4A]
Length = 147
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 54 DEIYVVREGETLHTISEK---CGDPY--IVEQNPH-INDPDDVFPGLVIKI 98
DE YV+++G+TL I+EK G Y IV N I D D +FPG I++
Sbjct: 93 DEFYVIQKGDTLWKIAEKHYGNGSKYTAIVAANKEVIKDADKIFPGQKIRL 143
>gi|408369378|ref|ZP_11167159.1| hypothetical protein I215_00710 [Galbibacter sp. ck-I2-15]
gi|407745124|gb|EKF56690.1| hypothetical protein I215_00710 [Galbibacter sp. ck-I2-15]
Length = 165
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 6/55 (10%)
Query: 50 NKPCDEIYVVREGETLHTISEKC-GD----PYIVEQN-PHINDPDDVFPGLVIKI 98
N+P + + V G+TL I++K G+ P I E N P ++DPD ++PG V++I
Sbjct: 106 NEPEAQFHTVVSGDTLSKIAKKYYGNAMKYPEIFEANKPMLSDPDKIYPGQVLRI 160
>gi|397665186|ref|YP_006506724.1| signal peptide protein [Legionella pneumophila subsp. pneumophila]
gi|397668269|ref|YP_006509806.1| signal peptide protein [Legionella pneumophila subsp. pneumophila]
gi|307611475|emb|CBX01146.1| hypothetical protein LPW_28451 [Legionella pneumophila 130b]
gi|395128597|emb|CCD06815.1| signal peptide protein [Legionella pneumophila subsp. pneumophila]
gi|395131680|emb|CCD09973.1| signal peptide protein [Legionella pneumophila subsp. pneumophila]
Length = 345
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 32/52 (61%), Gaps = 5/52 (9%)
Query: 57 YVVREGETLHTISEK-CGDPY----IVEQNPHINDPDDVFPGLVIKITPFKN 103
YVV+ G+TL +IS + +P+ + NP I +PD ++PG V+ + ++N
Sbjct: 29 YVVQPGDTLWSISSRFLNNPWEWKALWRANPQIQNPDRLYPGAVLALEYYQN 80
>gi|365966414|ref|YP_004947976.1| XkdP protein [Aggregatibacter actinomycetemcomitans ANH9381]
gi|365745327|gb|AEW76232.1| XkdP protein [Aggregatibacter actinomycetemcomitans ANH9381]
Length = 147
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 54 DEIYVVREGETLHTISEK---CGDPY--IVEQNPH-INDPDDVFPGLVIKI 98
DE YV+++G+TL I+EK G Y IV N I D D +FPG I++
Sbjct: 93 DEFYVIQKGDTLWKIAEKHYRNGSKYTAIVAANKEVIKDADKIFPGQKIRL 143
>gi|416052935|ref|ZP_11578570.1| XkdP protein [Aggregatibacter actinomycetemcomitans serotype e str.
SC1083]
gi|347991727|gb|EGY33190.1| XkdP protein [Aggregatibacter actinomycetemcomitans serotype e str.
SC1083]
Length = 147
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 54 DEIYVVREGETLHTISEK---CGDPY--IVEQNPH-INDPDDVFPGLVIKI 98
DE YV+++G+TL I+EK G Y IV N I D D +FPG I++
Sbjct: 93 DEFYVIQKGDTLWKIAEKHYGNGSKYTAIVAANKEVIKDADKIFPGQKIRL 143
>gi|148358670|ref|YP_001249877.1| LysM domain-containing protein [Legionella pneumophila str. Corby]
gi|296108240|ref|YP_003619941.1| signal peptide protein, LysM domain protein [Legionella pneumophila
2300/99 Alcoy]
gi|148280443|gb|ABQ54531.1| signal peptide protein, LysM domain protein [Legionella pneumophila
str. Corby]
gi|295650142|gb|ADG25989.1| signal peptide protein, LysM domain protein [Legionella pneumophila
2300/99 Alcoy]
Length = 345
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 32/52 (61%), Gaps = 5/52 (9%)
Query: 57 YVVREGETLHTISEK-CGDPY----IVEQNPHINDPDDVFPGLVIKITPFKN 103
YVV+ G+TL +IS + +P+ + NP I +PD ++PG V+ + ++N
Sbjct: 29 YVVQPGDTLWSISSRFLNNPWEWKALWRANPQIQNPDRLYPGAVLALEYYQN 80
>gi|339629448|ref|YP_004721091.1| LysM repeat-containing protein [Sulfobacillus acidophilus TPY]
gi|379007434|ref|YP_005256885.1| peptidoglycan-binding lysin domain-containing protein
[Sulfobacillus acidophilus DSM 10332]
gi|339287237|gb|AEJ41348.1| LysM repeat-containing protein [Sulfobacillus acidophilus TPY]
gi|361053696|gb|AEW05213.1| Peptidoglycan-binding lysin domain protein [Sulfobacillus
acidophilus DSM 10332]
Length = 320
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 57 YVVREGETLHTISEKCGDPYIVEQ--NPHINDPDDVFPGLVIKI 98
Y VR+G+TL I++ G + NPHI DP+ ++PG + I
Sbjct: 164 YTVRKGDTLSAIAQAHGVSLAALEAANPHITDPNLIYPGETVYI 207
>gi|387121583|ref|YP_006287466.1| XkdP protein [Aggregatibacter actinomycetemcomitans D7S-1]
gi|415765393|ref|ZP_11482718.1| XkdP protein [Aggregatibacter actinomycetemcomitans D17P-3]
gi|416037388|ref|ZP_11573901.1| XkdP protein [Aggregatibacter actinomycetemcomitans serotype a str.
H5P1]
gi|416049776|ref|ZP_11576719.1| XkdP protein [Aggregatibacter actinomycetemcomitans serotype d str.
I63B]
gi|416067310|ref|ZP_11582239.1| XkdP protein [Aggregatibacter actinomycetemcomitans serotype f str.
D18P1]
gi|429732762|ref|ZP_19267346.1| LysM domain protein [Aggregatibacter actinomycetemcomitans Y4]
gi|347991240|gb|EGY32732.1| XkdP protein [Aggregatibacter actinomycetemcomitans serotype d str.
I63B]
gi|347995863|gb|EGY37004.1| XkdP protein [Aggregatibacter actinomycetemcomitans serotype a str.
H5P1]
gi|348002202|gb|EGY42910.1| XkdP protein [Aggregatibacter actinomycetemcomitans serotype f str.
D18P1]
gi|348653903|gb|EGY69568.1| XkdP protein [Aggregatibacter actinomycetemcomitans D17P-3]
gi|385876075|gb|AFI87634.1| XkdP protein [Aggregatibacter actinomycetemcomitans D7S-1]
gi|429155466|gb|EKX98144.1| LysM domain protein [Aggregatibacter actinomycetemcomitans Y4]
Length = 147
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 54 DEIYVVREGETLHTISEK---CGDPY--IVEQNPH-INDPDDVFPGLVIKI 98
DE YV+++G+TL I+EK G Y IV N I D D +FPG I++
Sbjct: 93 DEFYVIQKGDTLWKIAEKHYGNGSKYTAIVAANKEVIKDADKIFPGQKIRL 143
>gi|429084828|ref|ZP_19147819.1| FIG00553508: hypothetical protein [Cronobacter condimenti 1330]
gi|426546067|emb|CCJ73860.1| FIG00553508: hypothetical protein [Cronobacter condimenti 1330]
Length = 148
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Query: 52 PCDEIYVVREGETLHTISEKC-GD----PYIVEQN-PHINDPDDVFPGLVIKI 98
P + Y V++G+TL IS++ GD P I E N P + P+ ++PG V++I
Sbjct: 94 PESQYYTVKKGDTLSAISQEVYGDANQYPKIFEANKPMLTSPEKIYPGQVLRI 146
>gi|52842802|ref|YP_096601.1| signal peptide protein [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
gi|378778491|ref|YP_005186930.1| signal peptide protein, LysM domain protein [Legionella pneumophila
subsp. pneumophila ATCC 43290]
gi|52629913|gb|AAU28654.1| signal peptide protein, LysM domain protein [Legionella pneumophila
subsp. pneumophila str. Philadelphia 1]
gi|364509307|gb|AEW52831.1| signal peptide protein, LysM domain protein [Legionella pneumophila
subsp. pneumophila ATCC 43290]
Length = 345
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 32/52 (61%), Gaps = 5/52 (9%)
Query: 57 YVVREGETLHTISEK-CGDPY----IVEQNPHINDPDDVFPGLVIKITPFKN 103
YVV+ G+TL +IS + +P+ + NP I +PD ++PG V+ + ++N
Sbjct: 29 YVVQPGDTLWSISSRFLNNPWEWKALWRANPQIKNPDRLYPGAVLALEYYQN 80
>gi|403050719|ref|ZP_10905203.1| LysM domain/BON superfamily protein [Acinetobacter bereziniae LMG
1003]
Length = 157
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 6/54 (11%)
Query: 51 KPCDEIYVVREGETLHTIS-EKCGDP----YIVEQN-PHINDPDDVFPGLVIKI 98
+P + Y V+ G+ L IS E GDP I E N P + + DD+FPG V++I
Sbjct: 102 EPESKFYTVKSGDNLSKISKEFYGDPNQYNKIFEANRPLLKNADDIFPGQVLRI 155
>gi|418464942|ref|ZP_13035881.1| LysM domain/BON superfamily protein [Aggregatibacter
actinomycetemcomitans RhAA1]
gi|359756897|gb|EHK91054.1| LysM domain/BON superfamily protein [Aggregatibacter
actinomycetemcomitans RhAA1]
Length = 147
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 54 DEIYVVREGETLHTISEK---CGDPY--IVEQNPH-INDPDDVFPGLVIKI 98
DE YV+++G+TL I+EK G Y IV N I D D +FPG I++
Sbjct: 93 DEFYVIQKGDTLWKIAEKHYDNGSKYTAIVAANKEVIKDADKIFPGQKIRL 143
>gi|416894527|ref|ZP_11925115.1| putative LysM domain protein [Aggregatibacter aphrophilus ATCC
33389]
gi|347813489|gb|EGY30162.1| putative LysM domain protein [Aggregatibacter aphrophilus ATCC
33389]
Length = 149
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 54 DEIYVVREGETLHTISEK---CGDPY--IVEQNPH-INDPDDVFPGLVIKI 98
DE YV+++G+TL I+EK G Y IV N I D D +FPG I++
Sbjct: 95 DEFYVIQKGDTLWKIAEKHYGNGSKYTAIVAANKEVIKDADKIFPGQKIRL 145
>gi|325953931|ref|YP_004237591.1| peptidoglycan-binding lysin domain protein [Weeksella virosa DSM
16922]
gi|323436549|gb|ADX67013.1| Peptidoglycan-binding lysin domain protein [Weeksella virosa DSM
16922]
Length = 151
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 6/49 (12%)
Query: 56 IYVVREGETLHTISEKC-GD----PYIVEQN-PHINDPDDVFPGLVIKI 98
+Y V++G+TL I+++ GD P I E N P + DPD ++PG V+ I
Sbjct: 100 LYTVKKGDTLSKIAKEVYGDMMKYPKIFEANKPMLKDPDKIYPGQVLYI 148
>gi|429122087|ref|ZP_19182688.1| LysM domain protein [Cronobacter sakazakii 680]
gi|426323412|emb|CCK13425.1| LysM domain protein [Cronobacter sakazakii 680]
Length = 161
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Query: 52 PCDEIYVVREGETLHTISEKC-GD----PYIVEQN-PHINDPDDVFPGLVIKI 98
P + Y V++G+TL IS++ GD P I E N P + P+ ++PG V++I
Sbjct: 107 PESQFYTVKKGDTLSAISKEVYGDANQYPKIFEANKPMLTSPEKIYPGQVLRI 159
>gi|358451150|ref|ZP_09161584.1| peptidoglycan-binding LysM [Marinobacter manganoxydans MnI7-9]
gi|357224383|gb|EHJ02914.1| peptidoglycan-binding LysM [Marinobacter manganoxydans MnI7-9]
Length = 705
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 57 YVVREGETLHTISEKCGDPY--IVEQNPHINDPDDVFPGLVIKI 98
Y VR G+TL I+++ ++ NP I +PD +FPG ++K+
Sbjct: 5 YTVRSGDTLSAIAQRHQTTLSSLMRLNPAIENPDRIFPGQLLKL 48
>gi|334339164|ref|YP_004544144.1| peptidoglycan-binding lysin domain-containing protein
[Desulfotomaculum ruminis DSM 2154]
gi|334090518|gb|AEG58858.1| Peptidoglycan-binding lysin domain protein [Desulfotomaculum
ruminis DSM 2154]
Length = 121
Score = 36.2 bits (82), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Query: 57 YVVREGETLHTISEKCG--DPYIVEQNPHINDPDDVFPGLVIKITPFK 102
Y V G+T+ +I+ + G + +V NPHI+DP+ +FPG V+ + F+
Sbjct: 17 YFVISGDTMSSIARQLGTSEEELVAANPHISDPNLLFPGDVLCVPGFR 64
>gi|251794015|ref|YP_003008747.1| LysM domain/BON superfamily protein [Aggregatibacter aphrophilus
NJ8700]
gi|422337036|ref|ZP_16418008.1| hypothetical protein HMPREF9335_01196 [Aggregatibacter aphrophilus
F0387]
gi|247535414|gb|ACS98660.1| XkdP protein [Aggregatibacter aphrophilus NJ8700]
gi|353345588|gb|EHB89879.1| hypothetical protein HMPREF9335_01196 [Aggregatibacter aphrophilus
F0387]
Length = 147
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 54 DEIYVVREGETLHTISEK---CGDPY--IVEQNPH-INDPDDVFPGLVIKI 98
DE YV+++G+TL I+EK G Y IV N I D D +FPG I++
Sbjct: 93 DEFYVIQKGDTLWKIAEKHYGNGSKYTAIVAANKEVIKDADKIFPGQKIRL 143
>gi|404495749|ref|YP_006719855.1| LysM domain-containing protein [Geobacter metallireducens GS-15]
gi|418066395|ref|ZP_12703759.1| Peptidoglycan-binding lysin domain protein [Geobacter
metallireducens RCH3]
gi|78193364|gb|ABB31131.1| LysM domain protein [Geobacter metallireducens GS-15]
gi|373560656|gb|EHP86913.1| Peptidoglycan-binding lysin domain protein [Geobacter
metallireducens RCH3]
Length = 333
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 32/50 (64%), Gaps = 5/50 (10%)
Query: 56 IYVVREGETLHTISEK-CGDPY----IVEQNPHINDPDDVFPGLVIKITP 100
IYV+++G+TL +S++ DPY + +NP I +P ++PG +++ P
Sbjct: 31 IYVIQKGDTLWGLSDRFLKDPYYWPNLWARNPAIGNPHFIYPGQRVRVYP 80
>gi|288941786|ref|YP_003444026.1| peptidoglycan-binding lysin domain-containing protein
[Allochromatium vinosum DSM 180]
gi|288897158|gb|ADC62994.1| Peptidoglycan-binding lysin domain protein [Allochromatium vinosum
DSM 180]
Length = 398
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 5/55 (9%)
Query: 55 EIYVVREGETLHTISEK-CGDPY----IVEQNPHINDPDDVFPGLVIKITPFKNR 104
+ YVVR G+TL I+ + DP+ + NP + +PD ++PG V+++T R
Sbjct: 36 QTYVVRPGDTLWDIAGRFLRDPWRWSEVWRANPSVENPDLIYPGDVLELTMVAGR 90
>gi|260598347|ref|YP_003210918.1| LysM domain/BON superfamily protein [Cronobacter turicensis z3032]
gi|260217524|emb|CBA31713.1| Uncharacterized protein ygaU [Cronobacter turicensis z3032]
Length = 148
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Query: 52 PCDEIYVVREGETLHTISEKC-GD----PYIVEQN-PHINDPDDVFPGLVIKI 98
P + Y V++G+TL IS++ GD P I E N P + P+ ++PG V++I
Sbjct: 94 PESQYYTVKKGDTLSAISKEVYGDANQYPKIFEANKPMLTSPEKIYPGQVLRI 146
>gi|254478688|ref|ZP_05092059.1| LysM domain protein [Carboxydibrachium pacificum DSM 12653]
gi|214035375|gb|EEB76078.1| LysM domain protein [Carboxydibrachium pacificum DSM 12653]
Length = 155
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 53 CDEIYVVREGETLHTISEKCGDPY--IVEQNPHINDPDDVFPGLVIKITPF 101
C IY VR G++L +I+ G +++ NP I+DP+ ++PG I I PF
Sbjct: 48 CRTIYTVRPGDSLWSIANMFGVSLDCLIKANPQISDPNLIYPGQQICI-PF 97
>gi|429087054|ref|ZP_19149786.1| FIG00553508: hypothetical protein [Cronobacter universalis NCTC
9529]
gi|426506857|emb|CCK14898.1| FIG00553508: hypothetical protein [Cronobacter universalis NCTC
9529]
Length = 148
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Query: 52 PCDEIYVVREGETLHTISEKC-GD----PYIVEQN-PHINDPDDVFPGLVIKI 98
P + Y V++G+TL IS++ GD P I E N P + P+ ++PG V++I
Sbjct: 94 PESQYYTVKKGDTLSAISKEVYGDANQYPKIFEANKPMLTSPEKIYPGQVLRI 146
>gi|429100989|ref|ZP_19162963.1| FIG00553508: hypothetical protein [Cronobacter turicensis 564]
gi|426287638|emb|CCJ89076.1| FIG00553508: hypothetical protein [Cronobacter turicensis 564]
Length = 148
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Query: 52 PCDEIYVVREGETLHTISEKC-GD----PYIVEQN-PHINDPDDVFPGLVIKI 98
P + Y V++G+TL IS++ GD P I E N P + P+ ++PG V++I
Sbjct: 94 PESQYYTVKKGDTLSAISKEVYGDANQYPKIFEANKPMLTSPEKIYPGQVLRI 146
>gi|386819579|ref|ZP_10106795.1| putative phospholipid-binding protein,LysM domain-containing
protein [Joostella marina DSM 19592]
gi|386424685|gb|EIJ38515.1| putative phospholipid-binding protein,LysM domain-containing
protein [Joostella marina DSM 19592]
Length = 165
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
Query: 51 KPCDEIYVVREGETLHTISEK-CGD----PYIVEQN-PHINDPDDVFPGLVIKITPFK 102
+P + V G++L I++K G+ P I E N P + DPD ++PG V++I P K
Sbjct: 107 EPVARFHTVVSGDSLSKIAKKFYGNAMKYPEIFEANKPMLTDPDKIYPGQVLRIPPTK 164
>gi|345023347|ref|ZP_08786960.1| hypothetical protein OTW25_18913 [Ornithinibacillus scapharcae
TW25]
Length = 325
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 55 EIYVVREGETLHTISEKCGDPY--IVEQNPHINDPDDVFPGLVIKI 98
+I++V++G+TL +S+K G Y ++ N H + PD V PG+ I+I
Sbjct: 2 KIHIVQKGDTLWELSKKYGVDYEELLAANSHFSSPDMVMPGMKIRI 47
>gi|259502220|ref|ZP_05745122.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus antri DSM 16041]
gi|259169838|gb|EEW54333.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus antri DSM 16041]
Length = 615
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 43 VTQPRNVNKPCDEIYVVREGETLHTISEKCGDPY-IVEQNPHINDPDDVFPGLVIKIT 99
V+QPR+ N Y V+ G+TL I+ + G Y + Q+ I +P+ ++ G V++++
Sbjct: 499 VSQPRHNNASASGSYTVQSGDTLSGIASRLGVSYEQLAQSNGIANPNRIYVGQVLRVS 556
>gi|406040356|ref|ZP_11047711.1| hypothetical protein AursD1_11170 [Acinetobacter ursingii DSM
16037 = CIP 107286]
Length = 383
Score = 35.8 bits (81), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 10/78 (12%)
Query: 26 LVLSCCESSDSGGFMGQVTQPRNVNKP-----CDEIYVVREGETLHTISEKCGD-----P 75
+ ++ C G NVN P +YVV++G+TL IS K D P
Sbjct: 21 IAVAICAGLGMTGLSATYAASPNVNPPSLRASAPNVYVVKKGDTLWDISGKFLDKPWRWP 80
Query: 76 YIVEQNPHINDPDDVFPG 93
I N H+ +P ++PG
Sbjct: 81 EIWASNKHVKNPHWIYPG 98
>gi|188586244|ref|YP_001917789.1| Peptidoglycan-binding LysM [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179350931|gb|ACB85201.1| Peptidoglycan-binding LysM [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 207
Score = 35.8 bits (81), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Query: 56 IYVVREGETLHTISEK-CGD-PYIVEQNPHINDPDDVFPG 93
IY VR +TL I+ + C D ++E NP I+DPD +FPG
Sbjct: 20 IYTVRPTDTLFKIARRFCVDLDRLIELNPQIDDPDLIFPG 59
>gi|392393585|ref|YP_006430187.1| Mn-containing catalase [Desulfitobacterium dehalogenans ATCC 51507]
gi|390524663|gb|AFM00394.1| Mn-containing catalase [Desulfitobacterium dehalogenans ATCC 51507]
Length = 222
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 57 YVVREGETLHTISEKCGDPY--IVEQNPHINDPDDVFPGLVIKITPFKNR 104
Y V+ G+T + I++K G + + NP I +P +FPG VIK+ P K+R
Sbjct: 3 YTVQPGDTFYLIAQKHGLSLEELQQANPQIQNPTLIFPGQVIKL-PDKSR 51
>gi|390990369|ref|ZP_10260656.1| LysM domain protein [Xanthomonas axonopodis pv. punicae str. LMG
859]
gi|372554932|emb|CCF67631.1| LysM domain protein [Xanthomonas axonopodis pv. punicae str. LMG
859]
Length = 97
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 27 VLSCCESSDSGGFMGQVTQPRNVNKPCDEIYVVREGETLHTISEK-CGD----PYIVEQN 81
V S E + + F T ++ + +E V+ G++L +I+++ GD P I E N
Sbjct: 16 VDSTAEVTPAPDFSNVRTSVQSTAQLVEESVTVQAGDSLSSIAKRHLGDGNLWPRIFEAN 75
Query: 82 PH-INDPDDVFPGLVIKITP 100
+ DPD +FPG V+++ P
Sbjct: 76 RETLQDPDKIFPGQVLRLPP 95
>gi|410616638|ref|ZP_11327624.1| lipoprotein NlpD [Glaciecola polaris LMG 21857]
gi|410163776|dbj|GAC31762.1| lipoprotein NlpD [Glaciecola polaris LMG 21857]
Length = 272
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Query: 18 CALFMAIMLVLSCCESSDSGGFMGQVTQP---RNVNKPC--DEIYVVREGETLHTISEKC 72
C LF L+L+ C + + ++ Q R+V K +IY V +G+TL +IS K
Sbjct: 8 CVLFCC--LLLTACSGRKAPAPVAELYQGKTFRDVQKSSYNSQIYTVEKGDTLFSISWKS 65
Query: 73 GDPYI-VEQNPHINDPDDVFPG 93
G Y + + +I P ++FPG
Sbjct: 66 GQDYRDIARFNNIRPPYNIFPG 87
>gi|254468802|ref|ZP_05082208.1| peptidase M23B [beta proteobacterium KB13]
gi|207087612|gb|EDZ64895.1| peptidase M23B [beta proteobacterium KB13]
Length = 286
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 43 VTQPRNVNKPCDEIYVVREGETLHTISEKCGDPY--IVEQNPHINDPDDVFPGLVIKITP 100
V +NV + C ++Y+V++G+T+ ++S KCG Y + E N +I P + G I+
Sbjct: 27 VDNSKNVIQKCPDVYIVKKGDTIFSLSLKCGFDYKDVAEVN-NIKKPYKISAGEEIRFDL 85
Query: 101 FKN 103
+N
Sbjct: 86 LRN 88
>gi|222054653|ref|YP_002537015.1| Peptidoglycan-binding LysM [Geobacter daltonii FRC-32]
gi|221563942|gb|ACM19914.1| Peptidoglycan-binding LysM [Geobacter daltonii FRC-32]
Length = 332
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 32/50 (64%), Gaps = 5/50 (10%)
Query: 56 IYVVREGETLHTISEK-CGDPY----IVEQNPHINDPDDVFPGLVIKITP 100
+YV+++G+TL +S++ DP+ + E+N I +P VFPG +KI P
Sbjct: 29 VYVIQKGDTLWGLSDRFIRDPFYWPNLWERNQVITNPHFVFPGQRVKIYP 78
>gi|160933831|ref|ZP_02081219.1| hypothetical protein CLOLEP_02693 [Clostridium leptum DSM 753]
gi|156867708|gb|EDO61080.1| LysM domain protein [Clostridium leptum DSM 753]
Length = 104
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 39 FMGQVTQPRNVNKPCDEIYVVREGETLHTISEKCGDPY--IVEQNPHINDPDDVFPGLVI 96
+ GQV + + Y+VR+G+TL +I+++ +++ N I DP+ ++PG V+
Sbjct: 41 YPGQVLRIATQFPVASKWYIVRQGDTLSSIADRYNTTVERLLQLNCCIYDPNRIYPGQVL 100
Query: 97 KITP 100
++ P
Sbjct: 101 RVKP 104
>gi|225181544|ref|ZP_03734986.1| Peptidoglycan-binding LysM [Dethiobacter alkaliphilus AHT 1]
gi|225167792|gb|EEG76601.1| Peptidoglycan-binding LysM [Dethiobacter alkaliphilus AHT 1]
Length = 550
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 52 PCDEIYVVREGETLHTISEKCGDPY--IVEQNPHINDPDDVFPGLVIKI 98
P IYVV+ G+TL I++K I+ NP I DP+ +FPG I I
Sbjct: 499 PSVTIYVVQPGDTLFKIAKKFSVTVDEILAANPDITDPNVIFPGQKIFI 547
>gi|374583039|ref|ZP_09656133.1| LysM domain-containing protein [Desulfosporosinus youngiae DSM
17734]
gi|374419121|gb|EHQ91556.1| LysM domain-containing protein [Desulfosporosinus youngiae DSM
17734]
Length = 212
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 45 QPRNVNKPCDEIYVVREGETLHTISEKCGDPY--IVEQNPHINDPDDVFPGLVIKI 98
+P V P E+YVV++G+T+ I+++ G I+ N ++ +PD +FPG V+ I
Sbjct: 148 EPLPVPTPSFEVYVVKQGDTVWKIAKRFGTTMQAIILAN-NLRNPDLIFPGQVLLI 202
>gi|424882781|ref|ZP_18306413.1| micrococcal nuclease-like nuclease [Rhizobium leguminosarum bv.
trifolii WU95]
gi|392519144|gb|EIW43876.1| micrococcal nuclease-like nuclease [Rhizobium leguminosarum bv.
trifolii WU95]
Length = 281
Score = 35.4 bits (80), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 31/70 (44%)
Query: 19 ALFMAIMLVLSCCESSDSGGFMGQVTQPRNVNKPCDEIYVVREGETLHTISEKCGDPYIV 78
AL + + L+ S E+ F+G V + P D+ + V +G+T+H E+ G +
Sbjct: 121 ALIVMVGLLYSLFETGPVQSFVGAVGTSSHAMGPVDQAFTVTDGDTVHVAGERAGTRLVG 180
Query: 79 EQNPHINDPD 88
P P
Sbjct: 181 FNTPEKFSPQ 190
>gi|387929626|ref|ZP_10132303.1| polysaccharide deacetylase [Bacillus methanolicus PB1]
gi|387586444|gb|EIJ78768.1| polysaccharide deacetylase [Bacillus methanolicus PB1]
Length = 325
Score = 35.4 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 52 PCDEIYVVREGETLHTISEKCGDPY--IVEQNPHINDPDDVFPGLVIKI 98
P Y V G+T + IS K G + NP I DP +FPG V+ I
Sbjct: 70 PASSTYKVISGDTFYKISVKLGVSMSELKLANPQIKDPARIFPGQVVNI 118
>gi|114319809|ref|YP_741492.1| peptidoglycan-binding protein LysM [Alkalilimnicola ehrlichii
MLHE-1]
gi|114226203|gb|ABI56002.1| Peptidoglycan-binding LysM [Alkalilimnicola ehrlichii MLHE-1]
Length = 1225
Score = 35.4 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 56 IYVVREGETLHTISEKCGDP--YIVEQNPHINDPDDVFPGLVIKITPFKNR 104
I+ VR+G+TL I+ + G P ++ NP I PD ++PG +++ + R
Sbjct: 4 IHTVRDGDTLWGIARQHGVPPATLMTLNPDIEHPDCIYPGQQVRLPENRER 54
>gi|20807784|ref|NP_622955.1| LysM repeat-containing protein [Thermoanaerobacter tengcongensis
MB4]
gi|20516340|gb|AAM24559.1| LysM-repeat proteins and domains [Thermoanaerobacter tengcongensis
MB4]
Length = 185
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 53 CDEIYVVREGETLHTISEKCGDPY--IVEQNPHINDPDDVFPGLVIKITPF 101
C IY VR G++L +I+ G +++ NP I+DP+ ++PG I I PF
Sbjct: 78 CRTIYTVRPGDSLWSIANMFGVSLDCLIKANPQISDPNLIYPGQQICI-PF 127
>gi|138894828|ref|YP_001125281.1| phosphatase-associated protein [Geobacillus thermodenitrificans
NG80-2]
gi|196247546|ref|ZP_03146248.1| NLP/P60 protein [Geobacillus sp. G11MC16]
gi|134266341|gb|ABO66536.1| Phosphatase-associated protein [Geobacillus thermodenitrificans
NG80-2]
gi|196212330|gb|EDY07087.1| NLP/P60 protein [Geobacillus sp. G11MC16]
Length = 347
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 39 FMGQVTQ---PRNVNKPCDEIYVVREGETLHTISEKCGDPY--IVEQNPHINDPDDVFPG 93
F GQV Q + Y V+ G+TL I++K G +V+ NP I +PD + G
Sbjct: 60 FPGQVLQVNGQSGSGQAASHTYTVQLGDTLSGIAKKFGTTVEALVKLNPSITNPDFIRDG 119
Query: 94 LVIKIT 99
V+K+T
Sbjct: 120 QVLKVT 125
>gi|219854251|ref|YP_002471373.1| hypothetical protein CKR_0908 [Clostridium kluyveri NBRC 12016]
gi|219567975|dbj|BAH05959.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 442
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Query: 54 DEIYVVREGETLHTISEKCG-DPYIVEQNPHINDPDDVFPGLVIKITPFKNR 104
+ Y VR G++L +ISE+ G + Q +I+DP ++PG+V++I P K++
Sbjct: 60 ERAYRVRPGDSLWSISERFGVSVNSIAQLNNISDPSAIYPGMVLRI-PDKSK 110
>gi|407069541|ref|ZP_11100379.1| hypothetical protein VcycZ_08301 [Vibrio cyclitrophicus ZF14]
Length = 363
Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Query: 45 QPRNVNKPCDEIYVVREGETLHTISEKCGD-----PYIVEQNPHINDPDDVFPG 93
QP + + ++YVV +G+TL IS D P + + NP I +P ++PG
Sbjct: 26 QPLTIRQDAPQVYVVVKGDTLWDISTMYLDSPWLWPRLWQVNPEIENPHLIYPG 79
>gi|86147128|ref|ZP_01065444.1| hypothetical protein MED222_18666 [Vibrio sp. MED222]
gi|85835012|gb|EAQ53154.1| hypothetical protein MED222_18666 [Vibrio sp. MED222]
Length = 363
Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 5/68 (7%)
Query: 31 CESSDSGGFMGQVTQPRNVNKPCDEIYVVREGETLHTISEKCGD-----PYIVEQNPHIN 85
C S QP + + E YVV +G+TL IS D P + + NP I
Sbjct: 12 CASLSFAAMAENSEQPLTIKQGAPEAYVVVKGDTLWDISAMYLDSPWLWPRLWQVNPEIE 71
Query: 86 DPDDVFPG 93
+P ++PG
Sbjct: 72 NPHLIYPG 79
>gi|153953629|ref|YP_001394394.1| glycosyl hydrolase [Clostridium kluyveri DSM 555]
gi|146346510|gb|EDK33046.1| Predicted glycosyl hydrolase [Clostridium kluyveri DSM 555]
Length = 432
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Query: 54 DEIYVVREGETLHTISEKCG-DPYIVEQNPHINDPDDVFPGLVIKITPFKNR 104
+ Y VR G++L +ISE+ G + Q +I+DP ++PG+V++I P K++
Sbjct: 50 ERAYRVRPGDSLWSISERFGVSVNSIAQLNNISDPSAIYPGMVLRI-PDKSK 100
>gi|84393442|ref|ZP_00992199.1| hypothetical protein V12B01_02032 [Vibrio splendidus 12B01]
gi|84375958|gb|EAP92848.1| hypothetical protein V12B01_02032 [Vibrio splendidus 12B01]
Length = 363
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 8/79 (10%)
Query: 20 LFMAIMLVLSCCESSDSGGFMGQVTQPRNVNKPCDEIYVVREGETLHTISEKCGD----- 74
F A+ L+ C S QP + + E YVV +G+TL IS D
Sbjct: 4 FFPALSLI---CASLSFATMAENSEQPLTIKQGAPEAYVVVKGDTLWDISAMYLDSPWLW 60
Query: 75 PYIVEQNPHINDPDDVFPG 93
P + + NP I +P ++PG
Sbjct: 61 PRLWQVNPEIENPHLIYPG 79
>gi|303257582|ref|ZP_07343594.1| lipoprotein NlpD [Burkholderiales bacterium 1_1_47]
gi|302859552|gb|EFL82631.1| lipoprotein NlpD [Burkholderiales bacterium 1_1_47]
Length = 254
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 55 EIYVVREGETLHTISEKCG-DPYIVEQNPHINDPDDVFPGLVIKIT 99
+Y V+ G+TL+ IS + G DP +V + H+ +P + G ++++
Sbjct: 36 SVYTVKPGDTLYAISSRYGLDPAVVARENHLTNPSHLLVGQKLRLS 81
>gi|443474602|ref|ZP_21064575.1| Peptidoglycan-binding lysin domain protein [Pseudanabaena biceps
PCC 7429]
gi|443020679|gb|ELS34612.1| Peptidoglycan-binding lysin domain protein [Pseudanabaena biceps
PCC 7429]
Length = 215
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 6/54 (11%)
Query: 54 DEIYVVREGETLHTIS-EKCGDP----YIVEQNPHINDPDDVFPGLVIKITPFK 102
D + +VR GETL +I+ E+ GDP I +N IN P + PG+V+ I P +
Sbjct: 160 DPVRIVRRGETLSSIANEEYGDPALWRIIANENNLIN-PRSLPPGMVLTIPPLR 212
>gi|403382496|ref|ZP_10924553.1| peptidoglycan-binding LysM [Paenibacillus sp. JC66]
Length = 272
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 5/48 (10%)
Query: 56 IYVVREGETLHTISEKCGD--PYIVEQN---PHINDPDDVFPGLVIKI 98
+Y VR G++L+TI+ + G P ++E N P I +P ++PG V+ +
Sbjct: 10 VYTVRPGDSLYTIANELGASLPELIESNALYPPITEPSLIYPGEVLLV 57
>gi|330999623|ref|ZP_08323332.1| peptidase, M23 family [Parasutterella excrementihominis YIT
11859]
gi|329574129|gb|EGG55705.1| peptidase, M23 family [Parasutterella excrementihominis YIT
11859]
Length = 245
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 55 EIYVVREGETLHTISEKCG-DPYIVEQNPHINDPDDVFPGLVIKIT 99
+Y V+ G+TL+ IS + G DP +V + H+ +P + G ++++
Sbjct: 27 SVYTVKPGDTLYAISSRYGLDPAVVARENHLTNPSHLLVGQKLRLS 72
>gi|333896232|ref|YP_004470106.1| peptidoglycan-binding lysin domain protein [Thermoanaerobacterium
xylanolyticum LX-11]
gi|333111497|gb|AEF16434.1| Peptidoglycan-binding lysin domain protein [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 291
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Query: 28 LSCCESSDSGGF--MGQVTQPRNVNKPCDEIYVVREGETLHTISEKCGDPY--IVEQNPH 83
+S ++ +G F + + N PC Y+V+ G+TL +I+ K G P I+ N +
Sbjct: 112 MSYAHNTYTGSFGEIHNIPAALMYNMPCPTNYIVQPGDTLWSIANKFGVPLDEILRAN-Y 170
Query: 84 INDPDDVFPGLVIKI 98
DP+ ++PG + I
Sbjct: 171 FMDPNMIYPGQTVVI 185
>gi|410583847|ref|ZP_11320952.1| putative glycosyl hydrolase [Thermaerobacter subterraneus DSM
13965]
gi|410504709|gb|EKP94219.1| putative glycosyl hydrolase [Thermaerobacter subterraneus DSM
13965]
Length = 280
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 52 PCDEIYVVREGETLHTISEKCGDPY--IVEQNPHINDPDDVFPGLVI 96
P + VV+ G++L TI ++ G P ++ NP + DP+ + PG V+
Sbjct: 173 PGGRLVVVQPGDSLFTIGQRNGVPVEAMIAANPQLADPNQIQPGQVV 219
Score = 34.7 bits (78), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 29/45 (64%), Gaps = 6/45 (13%)
Query: 56 IYVVREGETLHTISEKCG----DPYIVEQNPHINDPDDVFPGLVI 96
+YVV+ G+TL I+++ G D ++ NP I +PD ++PG V+
Sbjct: 232 LYVVQPGDTLFQIAQRFGVELQD--LIAANPQITNPDRIWPGEVV 274
>gi|297544613|ref|YP_003676915.1| spore coat assembly protein SafA [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296842388|gb|ADH60904.1| spore coat assembly protein SafA [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 199
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 53 CDEIYVVREGETLHTISEKCGDPY--IVEQNPHINDPDDVFPGLVIKITPF 101
C IY V+ G+T+ +I+ G ++ NP I+DP+ ++PG I I PF
Sbjct: 90 CKTIYTVKPGDTMWSIANMFGISLDCLIRANPQISDPNLIYPGQQICI-PF 139
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 53 CDEIYVVREGETLHTISEKCGDPY--IVEQNPHINDPDDVFPGLVIKI 98
C IY V+ G+T+ +I+ G ++ NP I+DP+ ++PG I I
Sbjct: 149 CKTIYTVKPGDTMWSIANMFGVSLDALIRANPQISDPNLIYPGQQICI 196
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 53 CDEIYVVREGETLHTISEKCGDPY--IVEQNPHINDPDDVFPGLVIKI 98
C Y V+ G+T+ +I+ K G ++ NP I+DP+ ++PG I I
Sbjct: 31 CRTFYTVQPGDTMWSIANKFGVSLDCLIRANPQISDPNLIYPGQRICI 78
>gi|320159889|ref|YP_004173113.1| hypothetical protein ANT_04790 [Anaerolinea thermophila UNI-1]
gi|319993742|dbj|BAJ62513.1| hypothetical protein ANT_04790 [Anaerolinea thermophila UNI-1]
Length = 211
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 35 DSGGFMGQVTQPRNVNKPCDEIYVVREGETLHTISEKCGD--PYIVEQNPHINDPDDVFP 92
SG + PR + K D Y V G+T++TI+ GD P + +N P+DV P
Sbjct: 147 SSGNWNEAAYGPRALRKHTD--YKVAAGDTVYTIACYFGDVSPEAILAANGLNSPNDVKP 204
Query: 93 GLVIKI 98
G+ +KI
Sbjct: 205 GMTLKI 210
>gi|421858668|ref|ZP_16290931.1| predicted glycosyl hydrolase [Paenibacillus popilliae ATCC 14706]
gi|410831737|dbj|GAC41368.1| predicted glycosyl hydrolase [Paenibacillus popilliae ATCC 14706]
Length = 506
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 32/46 (69%), Gaps = 2/46 (4%)
Query: 55 EIYVVREGETLHTISEKCGDPY--IVEQNPHINDPDDVFPGLVIKI 98
+I++V+ GE+L++IS+K P +++ NP + DP+ + G+ IK+
Sbjct: 2 KIHIVKNGESLYSISQKYDVPLEKLLKMNPQLQDPNKIDVGMKIKV 47
>gi|289578334|ref|YP_003476961.1| spore coat assembly protein SafA [Thermoanaerobacter italicus Ab9]
gi|289528047|gb|ADD02399.1| spore coat assembly protein SafA [Thermoanaerobacter italicus Ab9]
Length = 199
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 53 CDEIYVVREGETLHTISEKCGDPY--IVEQNPHINDPDDVFPGLVIKITPF 101
C IY V+ G+T+ +I+ G ++ NP I+DP+ ++PG I I PF
Sbjct: 90 CKTIYTVKPGDTMWSIANMFGISLDCLIRANPQISDPNLIYPGQQICI-PF 139
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 53 CDEIYVVREGETLHTISEKCGDPY--IVEQNPHINDPDDVFPGLVIKI 98
C IY V+ G+T+ +I+ G ++ NP I+DP+ ++PG I I
Sbjct: 149 CKTIYTVKPGDTMWSIANMFGVSLDALIRANPQISDPNLIYPGQQICI 196
Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 53 CDEIYVVREGETLHTISEKCGDPY--IVEQNPHINDPDDVFPGLVIKI 98
C Y V+ G+T+ +I+ K G ++ NP I+DP+ ++PG I I
Sbjct: 31 CRTFYTVQPGDTMWSIANKFGISLDCLIRANPQISDPNLIYPGQRICI 78
>gi|410634873|ref|ZP_11345500.1| hypothetical protein GLIP_0050 [Glaciecola lipolytica E3]
gi|410145617|dbj|GAC12705.1| hypothetical protein GLIP_0050 [Glaciecola lipolytica E3]
Length = 357
Score = 34.7 bits (78), Expect = 6.4, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Query: 48 NVNKPCDEIYVVREGETLHTISEKCGD-----PYIVEQNPHINDPDDVFPG 93
N+ + ++YVV++G+TL IS P + N HIN+P ++PG
Sbjct: 25 NIKQTAPQVYVVKKGDTLWDISSMYLSKPWLWPELWRNNVHINNPHLIYPG 75
>gi|404491978|ref|YP_006716084.1| LysM domain-containing protein [Pelobacter carbinolicus DSM 2380]
gi|77544107|gb|ABA87669.1| LysM domain protein [Pelobacter carbinolicus DSM 2380]
Length = 333
Score = 34.7 bits (78), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 5/48 (10%)
Query: 56 IYVVREGETLHTISEK-CGDPY----IVEQNPHINDPDDVFPGLVIKI 98
IY +++G+TL ISEK DPY + NP I +P ++PG + I
Sbjct: 27 IYTIKKGDTLWGISEKFIKDPYYWPNLWANNPFITNPHFIYPGQQVAI 74
>gi|374580317|ref|ZP_09653411.1| putative carboxypeptidase [Desulfosporosinus youngiae DSM 17734]
gi|374416399|gb|EHQ88834.1| putative carboxypeptidase [Desulfosporosinus youngiae DSM 17734]
Length = 350
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 57 YVVREGETLHTISEKCGDPY--IVEQNPHINDPDDVFPGLVIKI 98
+ V++GETL+ I++K G +V NP I +P + PG VI I
Sbjct: 4 HTVKKGETLYIIAKKYGIDLSSLVSANPTIKNPGMIMPGQVINI 47
>gi|193215574|ref|YP_001996773.1| peptidoglycan-binding LysM [Chloroherpeton thalassium ATCC 35110]
gi|193089051|gb|ACF14326.1| Peptidoglycan-binding LysM [Chloroherpeton thalassium ATCC 35110]
Length = 376
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 5/48 (10%)
Query: 56 IYVVREGETLHTISEKCGDPYIVE---QNPHINDPDDVFPGLVIKITP 100
Y V+ GETL +I+ KCG VE Q I + D++ PG+ +KI P
Sbjct: 331 FYEVQTGETLLSIANKCG--LTVEELRQQNRIKEDDEIKPGMKLKIMP 376
>gi|383648307|ref|ZP_09958713.1| hypothetical protein SchaN1_24995 [Streptomyces chartreusis NRRL
12338]
Length = 68
Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 49 VNKPCDEIYVVREGETLHTISE--KCGDPYIVEQNPHINDPDDVFPGLVIKITP 100
+ K + YVV+ G+ L I+ I+E NP I DPD + PG I++ P
Sbjct: 1 MEKTKTQFYVVKRGDNLTKIARMHHVSLDQILEWNPQIEDPDLIHPGDRIRVAP 54
>gi|374994379|ref|YP_004969878.1| carboxypeptidase [Desulfosporosinus orientis DSM 765]
gi|357212745|gb|AET67363.1| putative carboxypeptidase [Desulfosporosinus orientis DSM 765]
Length = 358
Score = 34.3 bits (77), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Query: 57 YVVREGETLHTISEKCGDPY--IVEQNPHINDPDDVFPGLVIKI 98
++V EGE+L+ I++K G ++ NP I +PD + PG V+ +
Sbjct: 12 HIVIEGESLYIIAQKYGISLSSLIAANPDIKNPDLIVPGQVLNV 55
>gi|390934164|ref|YP_006391669.1| Peptidoglycan-binding lysin domain-containing protein
[Thermoanaerobacterium saccharolyticum JW/SL-YS485]
gi|389569665|gb|AFK86070.1| Peptidoglycan-binding lysin domain-containing protein
[Thermoanaerobacterium saccharolyticum JW/SL-YS485]
Length = 295
Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 34 SDSGGFMGQVTQPRNVNKPCDEIYVVREGETLHTISEKCGDPY--IVEQNPHINDPDDVF 91
+ S G M + N PC Y+V+ G+TL +I+ K G P ++ N + DP+ ++
Sbjct: 120 TGSFGEMHNIPAAPMYNMPCPTNYIVQPGDTLWSIANKFGVPLDELLRAN-YFMDPNMIY 178
Query: 92 PGLVIKI 98
PG + I
Sbjct: 179 PGQTVVI 185
>gi|381210477|ref|ZP_09917548.1| hypothetical protein LGrbi_11166 [Lentibacillus sp. Grbi]
Length = 310
Score = 34.3 bits (77), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Query: 56 IYVVREGETLHTISEKCGDPY--IVEQNPHINDPDDVFPGLVIKI 98
I++V++G+TL I+++ G + + + NP ++ PD + PG+ IKI
Sbjct: 3 IHIVQKGDTLWEIAKQYGADFEQVKQLNPQLSSPDMIMPGMKIKI 47
>gi|317121452|ref|YP_004101455.1| peptidoglycan-binding lysin domain [Thermaerobacter marianensis DSM
12885]
gi|315591432|gb|ADU50728.1| Peptidoglycan-binding lysin domain [Thermaerobacter marianensis DSM
12885]
Length = 193
Score = 34.3 bits (77), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Query: 46 PRNVNKPCDEI-YVVREGETLHTISEKCGDPY--IVEQNPHINDPDDVFPGLVI 96
PR+ + CD I YVV+ G+TL I+ + G ++ NP + +PD + PG VI
Sbjct: 133 PRSPGR-CDGIQYVVQPGDTLFQIARRFGIDLQDLIAANPQVANPDRIRPGEVI 185
>gi|383936052|ref|ZP_09989482.1| hypothetical protein RNAN_2579 [Rheinheimera nanhaiensis E407-8]
gi|383702808|dbj|GAB59573.1| hypothetical protein RNAN_2579 [Rheinheimera nanhaiensis E407-8]
Length = 369
Score = 34.3 bits (77), Expect = 9.4, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Query: 38 GFMGQVTQPRNVNKPCDEIYVVREGETLHTIS-----EKCGDPYIVEQNPHINDPDDVFP 92
GF V + YVV++G+TL IS E P + + NP +++P +FP
Sbjct: 16 GFFNVVADVLKIRDDAPASYVVKKGDTLWDISALYLNEPWLWPQLWQMNPQVDNPHLIFP 75
Query: 93 GLVIKIT 99
G + +T
Sbjct: 76 GDTLTLT 82
>gi|239827865|ref|YP_002950489.1| spore coat assembly protein SafA [Geobacillus sp. WCH70]
gi|239808158|gb|ACS25223.1| spore coat assembly protein SafA [Geobacillus sp. WCH70]
Length = 432
Score = 34.3 bits (77), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 33/46 (71%), Gaps = 2/46 (4%)
Query: 55 EIYVVREGETLHTISEKCGDPY--IVEQNPHINDPDDVFPGLVIKI 98
+I++V++G+TL I++K G + + + N H+++PD + PG+ IK+
Sbjct: 2 KIHIVQKGDTLWKIAQKYGVDFEQLKKMNGHLSNPDMIMPGMKIKV 47
>gi|299746887|ref|XP_001839471.2| hypothetical protein CC1G_06684 [Coprinopsis cinerea okayama7#130]
gi|298407269|gb|EAU82374.2| hypothetical protein CC1G_06684 [Coprinopsis cinerea okayama7#130]
Length = 132
Score = 34.3 bits (77), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 39 FMGQVTQPRNVNKPCDEIYVVREGETLHTISEKCGDPY--IVEQNPHIND-PDDVFPGLV 95
++GQ+ C + V EG+T +I+ G Y ++E NP++N+ +++PGLV
Sbjct: 68 WVGQIICLAREGFDCSPVVTVSEGDTCVSIATAAGITYAKVLENNPNVNEFCSNIYPGLV 127
Query: 96 I 96
+
Sbjct: 128 L 128
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.136 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,651,835,491
Number of Sequences: 23463169
Number of extensions: 61243981
Number of successful extensions: 123865
Number of sequences better than 100.0: 341
Number of HSP's better than 100.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 278
Number of HSP's that attempted gapping in prelim test: 123637
Number of HSP's gapped (non-prelim): 392
length of query: 104
length of database: 8,064,228,071
effective HSP length: 73
effective length of query: 31
effective length of database: 6,351,416,734
effective search space: 196893918754
effective search space used: 196893918754
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 69 (31.2 bits)