Query 044601
Match_columns 213
No_of_seqs 107 out of 285
Neff 5.9
Searched_HMMs 29240
Date Mon Mar 25 08:12:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044601.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044601hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3eey_A Putative rRNA methylase 98.1 0.00011 3.8E-09 58.5 13.9 158 12-183 20-183 (197)
2 1yzh_A TRNA (guanine-N(7)-)-me 97.9 0.00015 5E-09 58.9 12.3 147 7-171 33-180 (214)
3 3cgg_A SAM-dependent methyltra 97.8 0.0005 1.7E-08 53.5 12.7 129 13-171 45-173 (195)
4 3evz_A Methyltransferase; NYSG 97.7 0.0011 3.9E-08 53.8 14.4 144 12-170 53-203 (230)
5 3bwc_A Spermidine synthase; SA 97.7 0.00017 5.7E-09 62.8 9.8 145 13-180 94-247 (304)
6 2fca_A TRNA (guanine-N(7)-)-me 97.7 0.0003 1E-08 57.6 10.6 146 7-170 30-176 (213)
7 3mti_A RRNA methylase; SAM-dep 97.7 0.0013 4.5E-08 51.6 13.8 121 12-150 20-140 (185)
8 1ixk_A Methyltransferase; open 97.6 0.0013 4.4E-08 57.4 14.3 146 13-169 117-271 (315)
9 3lpm_A Putative methyltransfer 97.6 0.0012 4E-08 55.4 12.7 149 14-175 49-203 (259)
10 3dh0_A SAM dependent methyltra 97.5 0.0014 4.7E-08 52.6 12.5 140 12-176 35-184 (219)
11 1g8a_A Fibrillarin-like PRE-rR 97.4 0.0016 5.6E-08 52.9 11.6 135 12-174 71-213 (227)
12 2qm3_A Predicted methyltransfe 97.4 0.0049 1.7E-07 54.8 15.5 131 14-172 172-308 (373)
13 2pwy_A TRNA (adenine-N(1)-)-me 97.4 0.002 7E-08 52.9 11.9 130 12-173 94-224 (258)
14 3e23_A Uncharacterized protein 97.4 0.002 7E-08 51.5 11.4 139 8-179 37-188 (211)
15 3kkz_A Uncharacterized protein 97.4 0.004 1.4E-07 51.8 13.6 145 11-182 43-206 (267)
16 3f4k_A Putative methyltransfer 97.4 0.0052 1.8E-07 50.4 14.1 139 10-178 42-201 (257)
17 2vdv_E TRNA (guanine-N(7)-)-me 97.3 0.00084 2.9E-08 55.8 8.7 143 6-164 30-191 (246)
18 2b3t_A Protein methyltransfera 97.3 0.0018 6.2E-08 54.7 10.8 140 13-169 108-259 (276)
19 3hem_A Cyclopropane-fatty-acyl 97.3 0.0075 2.6E-07 51.2 14.7 138 13-175 71-245 (302)
20 3ajd_A Putative methyltransfer 97.3 0.00089 3E-08 57.0 8.7 150 13-169 82-237 (274)
21 1fbn_A MJ fibrillarin homologu 97.2 0.0074 2.5E-07 49.4 13.6 136 12-175 72-215 (230)
22 2yxl_A PH0851 protein, 450AA l 97.2 0.0051 1.7E-07 56.3 13.3 149 12-169 257-415 (450)
23 1kpg_A CFA synthase;, cyclopro 97.2 0.01 3.6E-07 49.7 14.2 131 13-175 63-230 (287)
24 4df3_A Fibrillarin-like rRNA/T 97.2 0.004 1.4E-07 52.9 11.6 139 11-175 74-219 (233)
25 3l8d_A Methyltransferase; stru 97.2 0.0076 2.6E-07 48.8 12.7 133 12-175 51-202 (242)
26 2frn_A Hypothetical protein PH 97.1 0.0022 7.4E-08 54.8 9.7 126 13-169 124-253 (278)
27 3dli_A Methyltransferase; PSI- 97.1 0.0074 2.5E-07 49.4 12.6 134 8-175 35-186 (240)
28 4dmg_A Putative uncharacterize 97.1 0.0045 1.5E-07 56.1 12.2 143 7-168 206-352 (393)
29 2kw5_A SLR1183 protein; struct 97.1 0.0078 2.7E-07 47.6 12.1 138 8-176 24-174 (202)
30 1ej0_A FTSJ; methyltransferase 97.1 0.0027 9.3E-08 48.1 9.0 117 11-148 19-139 (180)
31 1yb2_A Hypothetical protein TA 97.1 0.0016 5.4E-08 55.1 8.4 130 12-174 108-238 (275)
32 1o54_A SAM-dependent O-methylt 97.1 0.004 1.4E-07 52.5 10.6 130 13-174 111-240 (277)
33 3k6r_A Putative transferase PH 97.0 0.0026 9E-08 55.3 9.2 126 11-167 122-251 (278)
34 3vc1_A Geranyl diphosphate 2-C 97.0 0.02 6.7E-07 49.0 14.6 145 9-182 112-278 (312)
35 1wxx_A TT1595, hypothetical pr 97.0 0.0052 1.8E-07 54.8 11.1 155 8-179 204-363 (382)
36 3m4x_A NOL1/NOP2/SUN family pr 97.0 0.0076 2.6E-07 55.9 12.4 148 13-170 104-260 (456)
37 3bus_A REBM, methyltransferase 97.0 0.029 9.8E-07 46.4 14.7 141 13-182 60-225 (273)
38 3ckk_A TRNA (guanine-N(7)-)-me 97.0 0.0013 4.4E-08 55.1 6.3 138 15-168 47-190 (235)
39 3sm3_A SAM-dependent methyltra 96.9 0.017 6E-07 46.1 12.8 135 12-173 28-207 (235)
40 3adn_A Spermidine synthase; am 96.9 0.0033 1.1E-07 54.7 9.0 112 13-145 82-198 (294)
41 3h2b_A SAM-dependent methyltra 96.9 0.017 5.8E-07 45.6 12.5 128 15-175 42-184 (203)
42 3e8s_A Putative SAM dependent 96.9 0.015 5.3E-07 46.1 12.1 128 14-172 52-208 (227)
43 2esr_A Methyltransferase; stru 96.9 0.0043 1.5E-07 48.2 8.4 118 8-149 25-142 (177)
44 3ujc_A Phosphoethanolamine N-m 96.9 0.012 4.3E-07 48.0 11.6 137 12-175 53-208 (266)
45 3ocj_A Putative exported prote 96.9 0.0053 1.8E-07 52.4 9.7 137 12-173 116-291 (305)
46 3dmg_A Probable ribosomal RNA 96.9 0.0039 1.3E-07 56.2 9.2 137 14-175 233-375 (381)
47 3mb5_A SAM-dependent methyltra 96.8 0.0088 3E-07 49.2 10.3 135 12-178 91-227 (255)
48 2fhp_A Methylase, putative; al 96.8 0.0042 1.4E-07 48.3 7.9 121 9-151 39-160 (187)
49 1i9g_A Hypothetical protein RV 96.8 0.0099 3.4E-07 49.6 10.7 106 12-147 97-205 (280)
50 1inl_A Spermidine synthase; be 96.8 0.0029 1E-07 54.7 7.6 113 14-146 90-206 (296)
51 2fk8_A Methoxy mycolic acid sy 96.8 0.011 3.8E-07 50.5 11.0 130 13-174 89-255 (318)
52 2o57_A Putative sarcosine dime 96.8 0.028 9.7E-07 47.2 13.3 135 11-174 79-235 (297)
53 1sqg_A SUN protein, FMU protei 96.8 0.013 4.5E-07 53.1 11.8 146 13-169 245-400 (429)
54 3dxy_A TRNA (guanine-N(7)-)-me 96.7 0.0086 2.9E-07 49.4 9.7 139 14-168 34-172 (218)
55 2ipx_A RRNA 2'-O-methyltransfe 96.7 0.021 7.3E-07 46.5 11.9 136 12-175 75-219 (233)
56 1ri5_A MRNA capping enzyme; me 96.7 0.019 6.4E-07 47.8 11.6 137 13-174 63-251 (298)
57 3m6w_A RRNA methylase; rRNA me 96.7 0.014 4.7E-07 54.3 11.5 147 13-170 100-256 (464)
58 1dus_A MJ0882; hypothetical pr 96.7 0.022 7.4E-07 43.9 10.9 108 13-148 51-160 (194)
59 3g2m_A PCZA361.24; SAM-depende 96.7 0.011 3.7E-07 50.1 9.9 105 15-147 83-192 (299)
60 1i1n_A Protein-L-isoaspartate 96.7 0.0096 3.3E-07 48.1 9.2 108 12-150 75-187 (226)
61 3mgg_A Methyltransferase; NYSG 96.6 0.046 1.6E-06 45.3 13.4 137 11-173 34-198 (276)
62 2b78_A Hypothetical protein SM 96.6 0.0048 1.6E-07 55.4 7.8 158 7-179 204-367 (385)
63 3grz_A L11 mtase, ribosomal pr 96.6 0.021 7.3E-07 45.3 10.9 126 13-172 59-184 (205)
64 2frx_A Hypothetical protein YE 96.6 0.018 6.3E-07 53.4 12.0 140 14-163 117-265 (479)
65 3cc8_A Putative methyltransfer 96.6 0.039 1.3E-06 43.8 12.5 130 13-175 31-187 (230)
66 2pt6_A Spermidine synthase; tr 96.6 0.0025 8.7E-08 56.0 5.7 112 13-146 115-231 (321)
67 4dzr_A Protein-(glutamine-N5) 96.6 0.0027 9.4E-08 50.1 5.3 146 13-170 29-189 (215)
68 3c0k_A UPF0064 protein YCCW; P 96.6 0.0055 1.9E-07 54.9 7.7 157 8-179 214-377 (396)
69 4dcm_A Ribosomal RNA large sub 96.5 0.0077 2.6E-07 54.1 8.6 136 15-171 223-366 (375)
70 2ozv_A Hypothetical protein AT 96.5 0.0079 2.7E-07 50.7 8.2 150 13-173 35-194 (260)
71 1xxl_A YCGJ protein; structura 96.5 0.028 9.4E-07 46.0 11.3 134 12-173 19-174 (239)
72 1ve3_A Hypothetical protein PH 96.5 0.022 7.6E-07 45.5 10.4 106 12-146 36-143 (227)
73 2p7i_A Hypothetical protein; p 96.5 0.019 6.4E-07 46.2 10.0 131 8-173 36-199 (250)
74 2i7c_A Spermidine synthase; tr 96.5 0.0028 9.5E-08 54.5 5.3 111 13-145 77-192 (283)
75 2ex4_A Adrenal gland protein A 96.5 0.019 6.6E-07 46.8 10.1 133 14-173 79-225 (241)
76 3p9n_A Possible methyltransfer 96.5 0.04 1.4E-06 43.3 11.5 113 13-149 43-157 (189)
77 1uir_A Polyamine aminopropyltr 96.5 0.0048 1.7E-07 53.8 6.6 114 13-145 76-195 (314)
78 2b2c_A Spermidine synthase; be 96.5 0.0028 9.7E-08 55.7 5.1 111 13-145 107-222 (314)
79 3bkx_A SAM-dependent methyltra 96.4 0.1 3.5E-06 43.1 14.3 140 12-174 41-220 (275)
80 3id6_C Fibrillarin-like rRNA/T 96.4 0.17 5.8E-06 42.6 15.7 137 12-175 74-218 (232)
81 3dtn_A Putative methyltransfer 96.4 0.085 2.9E-06 42.4 13.4 110 9-145 39-148 (234)
82 1vl5_A Unknown conserved prote 96.4 0.026 8.8E-07 46.5 10.4 132 13-174 36-191 (260)
83 2as0_A Hypothetical protein PH 96.3 0.013 4.5E-07 52.3 8.9 147 8-168 210-361 (396)
84 2b25_A Hypothetical protein; s 96.3 0.03 1E-06 48.5 10.9 107 12-146 103-220 (336)
85 4htf_A S-adenosylmethionine-de 96.3 0.04 1.4E-06 46.1 11.3 131 15-174 69-233 (285)
86 1xj5_A Spermidine synthase 1; 96.3 0.0077 2.6E-07 53.4 7.1 113 13-145 119-235 (334)
87 2igt_A SAM dependent methyltra 96.3 0.023 7.9E-07 50.1 10.1 141 14-168 153-299 (332)
88 4fsd_A Arsenic methyltransfera 96.3 0.061 2.1E-06 47.7 12.9 137 13-170 82-248 (383)
89 1y8c_A S-adenosylmethionine-de 96.3 0.058 2E-06 43.3 11.7 103 14-145 37-142 (246)
90 3gjy_A Spermidine synthase; AP 96.3 0.004 1.4E-07 55.3 5.0 113 16-148 91-203 (317)
91 1mjf_A Spermidine synthase; sp 96.3 0.0052 1.8E-07 52.6 5.6 108 13-145 74-193 (281)
92 3g89_A Ribosomal RNA small sub 96.2 0.075 2.6E-06 44.6 12.5 141 13-180 79-219 (249)
93 3ou2_A SAM-dependent methyltra 96.2 0.14 4.6E-06 40.4 13.5 106 8-146 40-147 (218)
94 2o07_A Spermidine synthase; st 96.2 0.011 3.7E-07 51.5 7.4 112 13-145 94-209 (304)
95 1nkv_A Hypothetical protein YJ 96.2 0.057 2E-06 44.0 11.4 137 12-178 34-192 (256)
96 2pjd_A Ribosomal RNA small sub 96.2 0.011 3.6E-07 51.9 7.3 115 14-152 196-310 (343)
97 1iy9_A Spermidine synthase; ro 96.1 0.0067 2.3E-07 51.9 5.6 111 14-145 75-189 (275)
98 3g5l_A Putative S-adenosylmeth 96.1 0.041 1.4E-06 45.0 10.2 132 14-175 44-218 (253)
99 3hm2_A Precorrin-6Y C5,15-meth 96.1 0.058 2E-06 41.3 10.5 128 13-173 24-153 (178)
100 1jsx_A Glucose-inhibited divis 96.1 0.056 1.9E-06 42.7 10.6 125 14-174 65-189 (207)
101 1xtp_A LMAJ004091AAA; SGPP, st 96.1 0.052 1.8E-06 44.1 10.7 134 13-173 92-238 (254)
102 2p8j_A S-adenosylmethionine-de 96.1 0.032 1.1E-06 44.0 8.9 112 10-147 19-130 (209)
103 2r3s_A Uncharacterized protein 96.0 0.15 5.1E-06 43.4 13.5 135 13-173 164-323 (335)
104 3a27_A TYW2, uncharacterized p 96.0 0.03 1E-06 47.6 8.9 109 9-148 114-222 (272)
105 3dlc_A Putative S-adenosyl-L-m 96.0 0.036 1.2E-06 43.6 8.9 104 16-145 45-148 (219)
106 3tma_A Methyltransferase; thum 96.0 0.2 6.7E-06 43.7 14.3 140 11-173 200-339 (354)
107 1vlm_A SAM-dependent methyltra 95.9 0.024 8.2E-07 45.7 7.8 134 9-183 42-196 (219)
108 3o4f_A Spermidine synthase; am 95.9 0.028 9.6E-07 49.4 8.7 116 13-145 82-198 (294)
109 2pbf_A Protein-L-isoaspartate 95.9 0.023 7.8E-07 45.9 7.5 111 11-148 77-196 (227)
110 3fpf_A Mtnas, putative unchara 95.9 0.12 4.3E-06 45.3 12.7 109 9-148 117-225 (298)
111 2zfu_A Nucleomethylin, cerebra 95.9 0.048 1.6E-06 43.5 9.2 116 9-171 62-177 (215)
112 1l3i_A Precorrin-6Y methyltran 95.8 0.041 1.4E-06 42.3 8.4 122 12-167 31-154 (192)
113 2xvm_A Tellurite resistance pr 95.8 0.084 2.9E-06 41.0 10.3 105 13-144 31-135 (199)
114 2gpy_A O-methyltransferase; st 95.8 0.052 1.8E-06 44.1 9.4 107 13-144 53-159 (233)
115 1xdz_A Methyltransferase GIDB; 95.8 0.1 3.4E-06 42.8 11.1 133 13-174 69-203 (240)
116 3lcc_A Putative methyl chlorid 95.8 0.12 4.1E-06 41.8 11.5 136 15-176 67-210 (235)
117 3bkw_A MLL3908 protein, S-aden 95.8 0.11 3.7E-06 41.8 11.1 133 13-175 42-216 (243)
118 2nxc_A L11 mtase, ribosomal pr 95.7 0.093 3.2E-06 43.8 10.6 123 13-172 119-243 (254)
119 2pxx_A Uncharacterized protein 95.7 0.05 1.7E-06 42.7 8.4 120 13-147 41-161 (215)
120 1nt2_A Fibrillarin-like PRE-rR 95.6 0.18 6.1E-06 41.0 12.0 136 12-175 55-197 (210)
121 3pfg_A N-methyltransferase; N, 95.6 0.13 4.6E-06 42.2 11.3 102 13-144 49-150 (263)
122 2nyu_A Putative ribosomal RNA 95.6 0.033 1.1E-06 43.6 7.1 116 12-148 20-148 (196)
123 3p2e_A 16S rRNA methylase; met 95.6 0.099 3.4E-06 43.1 10.3 146 13-176 23-188 (225)
124 1qzz_A RDMB, aclacinomycin-10- 95.6 0.5 1.7E-05 41.0 15.3 139 12-177 180-343 (374)
125 2yvl_A TRMI protein, hypotheti 95.6 0.24 8.4E-06 40.0 12.6 102 13-146 90-191 (248)
126 3hnr_A Probable methyltransfer 95.5 0.13 4.3E-06 40.9 10.5 128 14-172 45-200 (220)
127 3duw_A OMT, O-methyltransferas 95.5 0.055 1.9E-06 43.5 8.3 110 12-144 56-166 (223)
128 1wzn_A SAM-dependent methyltra 95.5 0.17 6E-06 41.0 11.4 106 14-146 41-146 (252)
129 3i9f_A Putative type 11 methyl 95.5 0.12 4.1E-06 39.4 9.8 129 13-179 16-154 (170)
130 2ift_A Putative methylase HI07 95.4 0.12 4.1E-06 41.4 10.1 113 13-149 52-167 (201)
131 3v97_A Ribosomal RNA large sub 95.4 0.074 2.5E-06 51.6 10.3 147 7-170 532-679 (703)
132 3tfw_A Putative O-methyltransf 95.3 0.11 3.9E-06 43.0 9.9 109 12-144 61-169 (248)
133 3tr6_A O-methyltransferase; ce 95.3 0.043 1.5E-06 44.0 7.0 110 12-144 62-173 (225)
134 2yxd_A Probable cobalt-precorr 95.3 0.3 1E-05 37.1 11.5 121 13-170 34-154 (183)
135 2cmg_A Spermidine synthase; tr 95.1 0.03 1E-06 47.7 5.9 96 14-145 72-171 (262)
136 1ws6_A Methyltransferase; stru 95.1 0.058 2E-06 40.9 6.9 111 14-149 41-151 (171)
137 2yxe_A Protein-L-isoaspartate 95.0 0.37 1.2E-05 38.2 11.8 106 12-148 75-180 (215)
138 3e05_A Precorrin-6Y C5,15-meth 95.0 0.59 2E-05 36.8 13.0 123 12-165 38-160 (204)
139 1x19_A CRTF-related protein; m 95.0 0.83 2.8E-05 39.6 15.0 136 12-174 188-349 (359)
140 1wy7_A Hypothetical protein PH 94.9 0.17 5.8E-06 39.9 9.3 127 14-173 49-175 (207)
141 3d2l_A SAM-dependent methyltra 94.9 0.1 3.5E-06 41.9 8.1 104 12-145 31-137 (243)
142 2b9e_A NOL1/NOP2/SUN domain fa 94.9 0.48 1.6E-05 41.3 13.0 148 13-169 101-261 (309)
143 3q7e_A Protein arginine N-meth 94.9 0.13 4.3E-06 45.2 9.3 106 13-142 65-170 (349)
144 3gu3_A Methyltransferase; alph 94.8 0.76 2.6E-05 38.4 13.8 111 9-147 17-128 (284)
145 2ih2_A Modification methylase 94.8 0.37 1.3E-05 42.4 12.3 132 13-165 38-186 (421)
146 2i62_A Nicotinamide N-methyltr 94.8 0.12 4E-06 42.1 8.4 149 13-174 55-240 (265)
147 3u81_A Catechol O-methyltransf 94.8 0.27 9.1E-06 39.6 10.4 112 13-146 57-171 (221)
148 3ofk_A Nodulation protein S; N 94.8 0.045 1.5E-06 43.6 5.6 108 12-147 49-156 (216)
149 3dr5_A Putative O-methyltransf 94.7 0.13 4.4E-06 42.3 8.5 102 16-143 58-161 (221)
150 2fyt_A Protein arginine N-meth 94.7 0.17 6E-06 44.2 9.8 106 12-142 62-168 (340)
151 1tw3_A COMT, carminomycin 4-O- 94.7 0.43 1.5E-05 41.2 12.3 136 12-174 181-340 (360)
152 3g5t_A Trans-aconitate 3-methy 94.7 0.29 1E-05 41.1 10.8 110 13-143 35-147 (299)
153 2plw_A Ribosomal RNA methyltra 94.6 0.37 1.3E-05 37.6 10.7 115 12-148 20-157 (201)
154 3i53_A O-methyltransferase; CO 94.6 0.96 3.3E-05 38.6 14.1 135 13-174 168-322 (332)
155 2hnk_A SAM-dependent O-methylt 94.6 0.079 2.7E-06 43.3 6.8 109 13-145 59-181 (239)
156 1dl5_A Protein-L-isoaspartate 94.6 0.3 1E-05 42.0 10.8 104 12-146 73-176 (317)
157 3m70_A Tellurite resistance pr 94.5 0.26 8.9E-06 41.0 10.0 103 14-145 120-223 (286)
158 2avd_A Catechol-O-methyltransf 94.4 0.081 2.8E-06 42.5 6.5 109 12-144 67-178 (229)
159 1r18_A Protein-L-isoaspartate( 94.4 0.36 1.2E-05 38.9 10.4 106 11-147 81-196 (227)
160 3c6k_A Spermine synthase; sper 94.4 0.025 8.6E-07 51.5 3.7 120 14-142 205-328 (381)
161 2yx1_A Hypothetical protein MJ 94.4 0.26 8.9E-06 43.0 10.0 102 13-149 194-295 (336)
162 3c3p_A Methyltransferase; NP_9 94.3 0.17 6E-06 40.2 8.2 103 13-143 55-158 (210)
163 3njr_A Precorrin-6Y methylase; 94.3 1.1 3.9E-05 35.7 13.1 125 13-172 54-179 (204)
164 3ccf_A Cyclopropane-fatty-acyl 94.3 0.63 2.2E-05 38.6 11.9 128 13-174 56-211 (279)
165 3gwz_A MMCR; methyltransferase 94.3 2.2 7.6E-05 37.2 15.9 136 12-173 200-356 (369)
166 2fpo_A Methylase YHHF; structu 94.2 0.32 1.1E-05 38.9 9.5 110 14-149 54-164 (202)
167 3r3h_A O-methyltransferase, SA 94.0 0.067 2.3E-06 44.5 5.2 109 13-144 59-169 (242)
168 3g07_A 7SK snRNA methylphospha 93.9 0.31 1.1E-05 41.3 9.3 34 14-48 46-79 (292)
169 3mq2_A 16S rRNA methyltransfer 93.8 0.6 2E-05 37.1 10.5 140 13-176 26-187 (218)
170 1g6q_1 HnRNP arginine N-methyl 93.8 0.29 1E-05 42.4 9.2 106 13-142 37-142 (328)
171 2ip2_A Probable phenazine-spec 93.8 1.7 5.8E-05 37.0 13.9 134 12-173 166-322 (334)
172 4gek_A TRNA (CMO5U34)-methyltr 93.8 0.28 9.6E-06 41.4 8.7 109 13-146 69-179 (261)
173 3mcz_A O-methyltransferase; ad 93.7 0.47 1.6E-05 40.8 10.3 133 15-170 180-336 (352)
174 2avn_A Ubiquinone/menaquinone 93.6 0.22 7.4E-06 41.1 7.7 101 14-147 54-154 (260)
175 2qfm_A Spermine synthase; sper 93.6 0.07 2.4E-06 48.3 4.9 121 14-147 188-316 (364)
176 3c3y_A Pfomt, O-methyltransfer 93.6 0.16 5.4E-06 41.9 6.8 107 12-144 68-180 (237)
177 1nv8_A HEMK protein; class I a 93.5 0.92 3.1E-05 38.6 11.7 117 14-146 123-250 (284)
178 3r0q_C Probable protein argini 93.5 0.25 8.7E-06 43.8 8.4 109 11-145 60-169 (376)
179 2yqz_A Hypothetical protein TT 93.5 0.47 1.6E-05 38.4 9.4 106 11-146 36-142 (263)
180 1sui_A Caffeoyl-COA O-methyltr 93.4 0.24 8.1E-06 41.3 7.6 108 13-144 78-189 (247)
181 3ntv_A MW1564 protein; rossman 93.4 0.68 2.3E-05 37.6 10.3 104 13-143 70-174 (232)
182 3cbg_A O-methyltransferase; cy 93.3 0.19 6.6E-06 41.1 6.9 108 13-144 71-181 (232)
183 2p35_A Trans-aconitate 2-methy 93.3 0.77 2.6E-05 37.1 10.5 102 13-146 32-133 (259)
184 3bxo_A N,N-dimethyltransferase 93.3 0.38 1.3E-05 38.4 8.5 100 13-145 39-141 (239)
185 3jwh_A HEN1; methyltransferase 93.2 1.6 5.6E-05 34.4 12.1 110 13-146 28-142 (217)
186 1jg1_A PIMT;, protein-L-isoasp 93.2 0.39 1.3E-05 39.0 8.5 104 12-148 89-192 (235)
187 2gb4_A Thiopurine S-methyltran 93.0 1.3 4.6E-05 37.0 11.7 136 13-174 67-228 (252)
188 1ne2_A Hypothetical protein TA 93.0 0.98 3.3E-05 35.4 10.3 118 13-170 50-167 (200)
189 3dou_A Ribosomal RNA large sub 92.9 0.49 1.7E-05 37.8 8.5 115 11-149 22-143 (191)
190 3bgv_A MRNA CAP guanine-N7 met 92.8 1.8 6.2E-05 36.5 12.4 116 13-146 33-156 (313)
191 3m33_A Uncharacterized protein 92.8 1.4 4.6E-05 35.4 11.1 119 13-172 47-166 (226)
192 3jwg_A HEN1, methyltransferase 92.7 3 0.0001 32.8 14.1 110 13-146 28-142 (219)
193 1uwv_A 23S rRNA (uracil-5-)-me 92.7 1.9 6.7E-05 38.8 13.1 138 13-183 285-422 (433)
194 3lbf_A Protein-L-isoaspartate 92.7 1.5 5.3E-05 34.3 11.1 102 12-147 75-176 (210)
195 1o9g_A RRNA methyltransferase; 92.6 0.88 3E-05 37.2 9.9 48 91-144 166-213 (250)
196 3q87_B N6 adenine specific DNA 92.6 0.75 2.6E-05 35.6 9.0 125 14-171 23-147 (170)
197 4e2x_A TCAB9; kijanose, tetron 92.5 0.47 1.6E-05 41.9 8.6 128 13-174 106-254 (416)
198 3lst_A CALO1 methyltransferase 92.4 0.94 3.2E-05 39.2 10.2 132 12-172 182-335 (348)
199 3bzb_A Uncharacterized protein 92.3 3.6 0.00012 34.5 13.6 138 13-172 78-236 (281)
200 1zx0_A Guanidinoacetate N-meth 92.3 0.21 7.1E-06 40.6 5.6 109 13-144 59-169 (236)
201 2ld4_A Anamorsin; methyltransf 92.2 0.83 2.9E-05 35.0 8.8 112 12-165 10-128 (176)
202 2xyq_A Putative 2'-O-methyl tr 92.2 0.44 1.5E-05 41.4 7.9 127 12-171 61-195 (290)
203 2y1w_A Histone-arginine methyl 92.1 0.52 1.8E-05 41.2 8.3 106 13-145 49-155 (348)
204 2h00_A Methyltransferase 10 do 92.1 4.1 0.00014 33.0 16.6 150 14-173 65-238 (254)
205 1p91_A Ribosomal RNA large sub 91.7 0.38 1.3E-05 39.6 6.6 97 13-147 84-180 (269)
206 3thr_A Glycine N-methyltransfe 91.6 0.52 1.8E-05 39.1 7.4 113 14-146 57-176 (293)
207 2gs9_A Hypothetical protein TT 91.6 0.61 2.1E-05 36.7 7.5 99 14-147 36-134 (211)
208 2bm8_A Cephalosporin hydroxyla 91.5 0.64 2.2E-05 38.3 7.8 103 14-145 81-187 (236)
209 3ggd_A SAM-dependent methyltra 90.9 0.74 2.5E-05 37.1 7.5 111 10-145 52-163 (245)
210 1vbf_A 231AA long hypothetical 90.3 2 7E-05 34.1 9.6 100 12-148 68-168 (231)
211 4fzv_A Putative methyltransfer 90.2 1.4 4.7E-05 39.5 9.2 119 30-158 164-297 (359)
212 3tm4_A TRNA (guanine N2-)-meth 90.2 4 0.00014 35.9 12.3 135 13-174 216-353 (373)
213 2jjq_A Uncharacterized RNA met 90.2 2.9 9.8E-05 37.9 11.5 129 12-183 288-417 (425)
214 1pjz_A Thiopurine S-methyltran 89.9 0.84 2.9E-05 36.4 6.9 135 13-174 21-177 (203)
215 3orh_A Guanidinoacetate N-meth 89.9 0.66 2.3E-05 38.0 6.4 109 13-143 59-168 (236)
216 3dp7_A SAM-dependent methyltra 89.6 2.7 9.3E-05 36.6 10.5 106 13-144 178-286 (363)
217 1fp1_D Isoliquiritigenin 2'-O- 89.4 2.3 7.8E-05 37.1 9.9 99 12-144 207-305 (372)
218 3ege_A Putative methyltransfer 89.3 4.9 0.00017 32.8 11.4 125 13-174 33-179 (261)
219 4a6d_A Hydroxyindole O-methylt 88.7 5.6 0.00019 34.6 11.9 134 12-172 177-333 (353)
220 2aot_A HMT, histamine N-methyl 88.1 2.7 9.1E-05 35.1 9.1 138 14-169 52-217 (292)
221 3axs_A Probable N(2),N(2)-dime 86.9 1.1 3.8E-05 40.5 6.4 106 15-147 53-160 (392)
222 2dul_A N(2),N(2)-dimethylguano 86.9 1.8 6.2E-05 38.7 7.7 104 14-146 47-165 (378)
223 3llv_A Exopolyphosphatase-rela 86.7 1.9 6.6E-05 31.9 6.7 73 15-102 6-79 (141)
224 3iv6_A Putative Zn-dependent a 86.6 5.2 0.00018 33.9 10.2 108 12-148 43-151 (261)
225 3gdh_A Trimethylguanosine synt 86.0 3.7 0.00013 32.9 8.5 77 14-106 78-157 (241)
226 3b3j_A Histone-arginine methyl 85.6 2.8 9.6E-05 38.6 8.5 105 13-145 157-263 (480)
227 2a14_A Indolethylamine N-methy 84.5 4.6 0.00016 33.2 8.6 146 13-174 54-239 (263)
228 1u2z_A Histone-lysine N-methyl 84.4 6.9 0.00024 35.7 10.4 112 13-144 241-358 (433)
229 3bt7_A TRNA (uracil-5-)-methyl 84.1 2.3 7.8E-05 37.4 6.9 133 15-183 214-359 (369)
230 1zg3_A Isoflavanone 4'-O-methy 83.9 6.1 0.00021 34.0 9.4 98 13-144 192-292 (358)
231 2g72_A Phenylethanolamine N-me 83.5 11 0.00037 31.1 10.6 147 14-174 71-257 (289)
232 3gnl_A Uncharacterized protein 81.8 22 0.00076 29.9 12.5 125 14-170 21-146 (244)
233 2p41_A Type II methyltransfera 81.8 1.5 5.1E-05 37.9 4.6 112 11-148 79-194 (305)
234 4dvj_A Putative zinc-dependent 80.4 5.7 0.00019 34.5 8.0 96 14-144 171-269 (363)
235 3two_A Mannitol dehydrogenase; 80.3 13 0.00046 31.7 10.3 91 11-144 173-264 (348)
236 3kr9_A SAM-dependent methyltra 80.2 24 0.00081 29.2 12.5 124 14-170 15-140 (225)
237 3lec_A NADB-rossmann superfami 80.0 25 0.00084 29.3 12.7 131 14-176 21-153 (230)
238 3s2e_A Zinc-containing alcohol 79.9 4.6 0.00016 34.5 7.1 99 11-144 163-262 (340)
239 2f8l_A Hypothetical protein LM 79.7 11 0.00039 32.3 9.7 151 14-180 130-292 (344)
240 3c85_A Putative glutathione-re 78.6 6.7 0.00023 30.2 7.2 74 15-102 39-114 (183)
241 2h1r_A Dimethyladenosine trans 78.3 8.5 0.00029 32.7 8.3 78 13-105 41-118 (299)
242 3reo_A (ISO)eugenol O-methyltr 76.9 36 0.0012 29.4 13.4 128 12-173 201-355 (368)
243 2zig_A TTHA0409, putative modi 76.7 27 0.00091 29.4 11.0 102 71-175 20-138 (297)
244 1fp2_A Isoflavone O-methyltran 76.6 35 0.0012 29.1 12.6 100 12-145 186-288 (352)
245 3fwz_A Inner membrane protein 75.6 9.2 0.00032 28.3 6.9 74 15-103 7-81 (140)
246 3goh_A Alcohol dehydrogenase, 74.3 5.1 0.00018 33.8 5.8 65 11-98 139-204 (315)
247 4hc4_A Protein arginine N-meth 74.2 12 0.00042 33.3 8.5 109 14-148 83-199 (376)
248 3k31_A Enoyl-(acyl-carrier-pro 73.0 16 0.00055 30.5 8.5 131 1-144 9-167 (296)
249 3gru_A Dimethyladenosine trans 71.3 22 0.00076 30.5 9.2 76 13-103 49-124 (295)
250 1pl8_A Human sorbitol dehydrog 71.0 18 0.0006 31.1 8.5 100 11-144 168-272 (356)
251 3l9w_A Glutathione-regulated p 70.0 8.2 0.00028 34.8 6.3 75 14-103 3-78 (413)
252 2qy6_A UPF0209 protein YFCK; s 69.9 31 0.0011 28.8 9.6 138 14-170 60-232 (257)
253 1e3j_A NADP(H)-dependent ketos 68.7 19 0.00066 30.7 8.3 99 11-144 165-270 (352)
254 4ej6_A Putative zinc-binding d 68.0 15 0.00052 31.8 7.5 100 11-144 179-283 (370)
255 2aef_A Calcium-gated potassium 67.7 13 0.00044 29.8 6.5 76 10-102 4-80 (234)
256 1wma_A Carbonyl reductase [NAD 67.7 9.1 0.00031 30.6 5.6 121 14-144 3-137 (276)
257 3ek2_A Enoyl-(acyl-carrier-pro 67.5 18 0.00063 29.0 7.5 81 9-101 8-100 (271)
258 3p9c_A Caffeic acid O-methyltr 66.1 64 0.0022 27.8 13.7 128 12-173 199-353 (364)
259 3jyn_A Quinone oxidoreductase; 66.1 24 0.00082 29.7 8.2 121 11-167 137-261 (325)
260 1e3i_A Alcohol dehydrogenase, 65.4 27 0.00094 30.0 8.6 97 11-143 192-295 (376)
261 3nrc_A Enoyl-[acyl-carrier-pro 65.3 38 0.0013 27.7 9.2 74 15-101 26-111 (280)
262 4hg2_A Methyltransferase type 65.3 19 0.00065 29.9 7.3 97 14-146 39-136 (257)
263 1boo_A Protein (N-4 cytosine-s 64.6 17 0.00059 31.2 7.1 97 75-174 17-121 (323)
264 3ijr_A Oxidoreductase, short c 62.3 56 0.0019 27.0 9.8 123 14-145 46-182 (291)
265 3h28_A Sulfide-quinone reducta 61.9 5.2 0.00018 35.3 3.3 89 15-105 142-256 (430)
266 3ip1_A Alcohol dehydrogenase, 60.9 15 0.0005 32.3 6.1 76 11-99 210-288 (404)
267 1pqw_A Polyketide synthase; ro 60.9 18 0.00063 27.9 6.1 95 11-143 35-135 (198)
268 2oxt_A Nucleoside-2'-O-methylt 60.8 54 0.0018 27.3 9.4 116 11-153 71-191 (265)
269 2fzw_A Alcohol dehydrogenase c 60.4 36 0.0012 29.1 8.4 98 11-144 187-291 (373)
270 4fn4_A Short chain dehydrogena 60.2 60 0.002 27.0 9.5 77 15-100 7-91 (254)
271 3htx_A HEN1; HEN1, small RNA m 60.1 96 0.0033 31.3 12.2 109 14-145 721-834 (950)
272 3ius_A Uncharacterized conserv 60.0 28 0.00097 28.1 7.3 69 16-105 6-75 (286)
273 1mio_B Nitrogenase molybdenum 59.7 10 0.00035 34.5 4.9 64 13-84 310-378 (458)
274 2dph_A Formaldehyde dismutase; 59.7 17 0.00057 31.8 6.2 50 11-73 182-232 (398)
275 3o38_A Short chain dehydrogena 59.6 12 0.0004 30.4 4.9 80 14-101 21-109 (266)
276 2jhf_A Alcohol dehydrogenase E 59.3 47 0.0016 28.5 9.0 97 11-143 188-291 (374)
277 3k0b_A Predicted N6-adenine-sp 59.3 95 0.0032 27.4 12.4 106 41-174 265-370 (393)
278 1cdo_A Alcohol dehydrogenase; 59.1 44 0.0015 28.7 8.8 98 11-144 189-293 (374)
279 3v2g_A 3-oxoacyl-[acyl-carrier 59.0 73 0.0025 26.0 10.1 122 14-144 30-164 (271)
280 3oig_A Enoyl-[acyl-carrier-pro 58.4 54 0.0018 26.3 8.8 80 14-102 6-96 (266)
281 1p0f_A NADP-dependent alcohol 57.8 15 0.00051 31.7 5.5 99 11-143 188-291 (373)
282 3ldg_A Putative uncharacterize 57.7 1E+02 0.0034 27.2 12.4 105 41-173 258-362 (384)
283 2wa2_A Non-structural protein 57.6 31 0.0011 29.0 7.4 114 12-152 80-198 (276)
284 3sso_A Methyltransferase; macr 57.3 18 0.00063 33.0 6.1 99 14-144 216-323 (419)
285 4a2c_A Galactitol-1-phosphate 57.2 51 0.0017 27.7 8.7 100 11-144 157-259 (346)
286 3sju_A Keto reductase; short-c 56.9 72 0.0025 26.1 9.4 87 6-101 15-109 (279)
287 3bed_A PTS system, IIA compone 56.7 22 0.00077 26.9 5.8 58 16-78 6-70 (142)
288 3grk_A Enoyl-(acyl-carrier-pro 56.1 86 0.0029 25.9 9.9 121 14-144 30-168 (293)
289 1g60_A Adenine-specific methyl 55.2 71 0.0024 26.2 9.1 81 91-176 21-102 (260)
290 1f8f_A Benzyl alcohol dehydrog 54.1 19 0.00066 31.0 5.6 99 11-143 187-287 (371)
291 3sx6_A Sulfide-quinone reducta 53.2 7.4 0.00025 34.4 2.7 43 63-105 214-269 (437)
292 2c0c_A Zinc binding alcohol de 52.9 37 0.0013 29.2 7.2 97 11-143 160-259 (362)
293 1zq9_A Probable dimethyladenos 52.7 47 0.0016 27.7 7.7 78 13-105 27-105 (285)
294 3tqs_A Ribosomal RNA small sub 52.5 47 0.0016 27.6 7.6 79 13-103 28-106 (255)
295 1id1_A Putative potassium chan 52.0 61 0.0021 23.9 7.5 77 15-102 3-80 (153)
296 3jv7_A ADH-A; dehydrogenase, n 50.8 25 0.00084 29.9 5.7 99 11-144 168-269 (345)
297 4b7c_A Probable oxidoreductase 50.7 39 0.0013 28.4 6.9 99 10-144 145-247 (336)
298 2d8a_A PH0655, probable L-thre 50.4 47 0.0016 28.1 7.4 96 14-143 167-265 (348)
299 3qiv_A Short-chain dehydrogena 50.2 24 0.00082 28.2 5.2 79 14-101 8-94 (253)
300 3fpc_A NADP-dependent alcohol 49.8 29 0.00098 29.6 5.9 100 11-144 163-265 (352)
301 3r3s_A Oxidoreductase; structu 49.6 1E+02 0.0035 25.4 9.3 124 14-145 48-185 (294)
302 1af7_A Chemotaxis receptor met 48.7 49 0.0017 27.9 7.2 45 92-149 212-256 (274)
303 3rkr_A Short chain oxidoreduct 48.6 22 0.00074 28.9 4.7 78 15-101 29-114 (262)
304 3v97_A Ribosomal RNA large sub 48.3 1.9E+02 0.0065 27.6 12.2 108 40-174 257-367 (703)
305 3s1s_A Restriction endonucleas 47.7 70 0.0024 32.0 8.9 160 13-181 320-505 (878)
306 1m6y_A S-adenosyl-methyltransf 47.3 29 0.00098 29.8 5.5 83 13-103 25-108 (301)
307 3lyl_A 3-oxoacyl-(acyl-carrier 47.3 36 0.0012 27.0 5.9 79 14-101 4-90 (247)
308 2hmt_A YUAA protein; RCK, KTN, 47.3 34 0.0012 24.3 5.2 74 15-103 6-80 (144)
309 3awd_A GOX2181, putative polyo 47.0 89 0.003 24.6 8.2 79 14-101 12-98 (260)
310 1lnq_A MTHK channels, potassiu 46.8 17 0.00057 31.0 3.9 72 13-101 113-185 (336)
311 2vdw_A Vaccinia virus capping 46.2 76 0.0026 26.7 8.0 108 14-146 48-170 (302)
312 1qgu_B Protein (nitrogenase mo 45.9 19 0.00066 33.4 4.5 65 12-84 357-427 (519)
313 3is3_A 17BETA-hydroxysteroid d 45.8 1.2E+02 0.004 24.5 10.8 124 14-146 17-153 (270)
314 1xu9_A Corticosteroid 11-beta- 45.7 76 0.0026 25.8 7.8 78 14-100 27-113 (286)
315 3aek_A Light-independent proto 45.6 12 0.00042 33.7 3.0 37 13-49 305-343 (437)
316 3ucx_A Short chain dehydrogena 45.4 1.2E+02 0.004 24.4 9.5 79 14-101 10-96 (264)
317 1piw_A Hypothetical zinc-type 45.3 31 0.0011 29.5 5.5 37 11-49 176-213 (360)
318 4fs3_A Enoyl-[acyl-carrier-pro 44.9 1.2E+02 0.0042 24.4 10.6 78 14-102 5-95 (256)
319 4erc_A Dual specificity protei 43.9 82 0.0028 22.8 7.1 75 61-149 25-99 (150)
320 1h2b_A Alcohol dehydrogenase; 43.9 42 0.0014 28.8 6.1 37 10-48 182-220 (359)
321 3tjr_A Short chain dehydrogena 43.8 38 0.0013 28.3 5.6 79 14-101 30-116 (301)
322 3h7a_A Short chain dehydrogena 43.6 44 0.0015 27.0 5.9 79 14-101 6-91 (252)
323 3soz_A ORF 245 protein, cytopl 43.3 5 0.00017 34.1 0.0 73 13-100 1-77 (248)
324 2ae2_A Protein (tropinone redu 42.8 50 0.0017 26.5 6.1 79 14-101 8-95 (260)
325 2qe6_A Uncharacterized protein 42.5 1.4E+02 0.0049 24.5 10.7 111 14-148 77-199 (274)
326 1kol_A Formaldehyde dehydrogen 42.4 67 0.0023 27.8 7.2 50 11-73 182-232 (398)
327 1zsy_A Mitochondrial 2-enoyl t 42.4 61 0.0021 27.6 6.9 58 10-77 163-222 (357)
328 1vj0_A Alcohol dehydrogenase, 41.1 40 0.0014 29.2 5.5 98 12-143 193-296 (380)
329 2okc_A Type I restriction enzy 41.1 60 0.002 28.9 6.8 122 14-148 171-310 (445)
330 2b5w_A Glucose dehydrogenase; 41.0 45 0.0016 28.4 5.8 96 16-144 174-272 (357)
331 3fbg_A Putative arginate lyase 41.0 34 0.0012 29.1 5.0 93 14-142 150-245 (346)
332 1ja9_A 4HNR, 1,3,6,8-tetrahydr 40.7 83 0.0028 25.0 7.1 80 14-101 20-107 (274)
333 1qor_A Quinone oxidoreductase; 40.7 36 0.0012 28.5 5.0 95 11-143 137-237 (327)
334 3o26_A Salutaridine reductase; 40.7 42 0.0014 27.3 5.4 79 14-101 11-99 (311)
335 4e3z_A Putative oxidoreductase 40.6 51 0.0018 26.7 5.9 87 6-100 17-111 (272)
336 2pjd_A Ribosomal RNA small sub 40.6 40 0.0014 28.8 5.4 93 15-145 20-112 (343)
337 3fut_A Dimethyladenosine trans 40.3 83 0.0028 26.4 7.3 78 13-106 46-123 (271)
338 3l4b_C TRKA K+ channel protien 40.3 63 0.0021 25.3 6.2 31 16-48 1-32 (218)
339 3uwp_A Histone-lysine N-methyl 40.2 2.2E+02 0.0075 26.1 11.1 108 13-144 172-287 (438)
340 2eih_A Alcohol dehydrogenase; 40.0 60 0.002 27.4 6.4 95 11-143 163-263 (343)
341 3gpi_A NAD-dependent epimerase 40.0 51 0.0017 26.6 5.8 94 15-131 3-97 (286)
342 1yb1_A 17-beta-hydroxysteroid 39.7 37 0.0013 27.6 4.9 78 15-101 31-116 (272)
343 3e8x_A Putative NAD-dependent 38.7 1.4E+02 0.0047 23.2 11.0 137 14-173 20-171 (236)
344 2cdc_A Glucose dehydrogenase g 38.4 62 0.0021 27.7 6.3 94 15-143 181-276 (366)
345 3lzw_A Ferredoxin--NADP reduct 38.0 49 0.0017 26.9 5.4 64 15-85 154-217 (332)
346 3h2s_A Putative NADH-flavin re 37.8 69 0.0024 24.5 6.0 72 16-104 1-73 (224)
347 2r6z_A UPF0341 protein in RSP 37.8 55 0.0019 27.1 5.7 84 14-103 83-171 (258)
348 1pdo_A Mannose permease; phosp 37.6 29 0.001 26.0 3.6 57 17-78 3-67 (135)
349 3ipr_A PTS system, IIA compone 37.5 54 0.0019 25.1 5.2 57 17-78 3-67 (150)
350 2pju_A Propionate catabolism o 37.4 74 0.0025 26.2 6.4 53 16-77 107-160 (225)
351 3uf0_A Short-chain dehydrogena 37.2 75 0.0026 26.0 6.4 76 15-100 31-113 (273)
352 3uko_A Alcohol dehydrogenase c 36.9 1.2E+02 0.0041 26.0 7.9 100 11-144 190-294 (378)
353 1rjw_A ADH-HT, alcohol dehydro 36.4 55 0.0019 27.6 5.6 95 11-143 161-259 (339)
354 3l77_A Short-chain alcohol deh 36.2 1.5E+02 0.0052 23.0 10.0 78 15-101 2-88 (235)
355 4ibo_A Gluconate dehydrogenase 36.0 38 0.0013 27.8 4.4 79 14-101 25-111 (271)
356 3hp7_A Hemolysin, putative; st 36.0 2E+02 0.0069 24.4 10.1 127 14-172 85-231 (291)
357 3d7l_A LIN1944 protein; APC893 35.9 39 0.0013 25.8 4.2 34 15-49 3-36 (202)
358 4ggo_A Trans-2-enoyl-COA reduc 35.7 22 0.00074 32.4 3.0 89 13-101 48-148 (401)
359 3lfh_A Manxa, phosphotransfera 35.4 1.1E+02 0.0038 23.2 6.7 56 16-76 4-68 (144)
360 2bc0_A NADH oxidase; flavoprot 35.0 46 0.0016 29.8 5.1 85 13-101 192-287 (490)
361 2h6e_A ADH-4, D-arabinose 1-de 34.9 44 0.0015 28.3 4.7 95 14-143 170-267 (344)
362 4da9_A Short-chain dehydrogena 34.8 1.3E+02 0.0043 24.6 7.5 79 15-101 29-115 (280)
363 3r1i_A Short-chain type dehydr 34.8 43 0.0015 27.6 4.5 79 14-101 31-117 (276)
364 3a28_C L-2.3-butanediol dehydr 34.7 1.7E+02 0.0059 23.2 8.7 78 15-101 2-89 (258)
365 1xhl_A Short-chain dehydrogena 34.6 1.7E+02 0.0057 24.1 8.3 79 14-101 25-114 (297)
366 2jah_A Clavulanic acid dehydro 34.3 1.7E+02 0.0059 23.1 8.8 79 14-101 6-92 (247)
367 2xdq_B Light-independent proto 34.2 28 0.00097 32.0 3.6 33 11-45 299-333 (511)
368 3qwb_A Probable quinone oxidor 33.9 61 0.0021 27.2 5.4 98 11-144 145-246 (334)
369 1tt7_A YHFP; alcohol dehydroge 33.7 97 0.0033 25.8 6.7 94 12-143 147-245 (330)
370 2xdq_A Light-independent proto 33.5 39 0.0013 30.3 4.3 33 12-46 314-347 (460)
371 2b4q_A Rhamnolipids biosynthes 33.4 49 0.0017 27.2 4.6 79 14-101 28-113 (276)
372 4eez_A Alcohol dehydrogenase 1 33.4 1.1E+02 0.0038 25.6 7.0 54 11-77 160-214 (348)
373 3if4_A Integron cassette prote 32.9 27 0.00094 26.1 2.6 12 137-148 34-45 (119)
374 1gee_A Glucose 1-dehydrogenase 32.8 1.8E+02 0.0061 22.8 8.8 79 15-101 7-93 (261)
375 3ctm_A Carbonyl reductase; alc 32.6 38 0.0013 27.4 3.8 77 14-101 33-119 (279)
376 4iin_A 3-ketoacyl-acyl carrier 32.3 70 0.0024 25.9 5.4 80 14-101 28-115 (271)
377 3ruf_A WBGU; rossmann fold, UD 31.5 93 0.0032 25.7 6.2 79 14-102 24-109 (351)
378 1qsg_A Enoyl-[acyl-carrier-pro 31.3 1.3E+02 0.0044 24.1 6.8 76 14-101 8-95 (265)
379 1xkq_A Short-chain reductase f 31.3 1.6E+02 0.0054 23.8 7.5 79 14-101 5-94 (280)
380 3ef6_A Toluene 1,2-dioxygenase 31.3 1E+02 0.0036 26.6 6.7 84 13-100 141-236 (410)
381 2p91_A Enoyl-[acyl-carrier-pro 31.1 2.1E+02 0.0072 23.1 9.1 75 15-101 21-107 (285)
382 3abi_A Putative uncharacterize 30.9 2.3E+02 0.0077 24.2 8.7 120 15-174 16-135 (365)
383 3gaf_A 7-alpha-hydroxysteroid 30.8 79 0.0027 25.4 5.5 77 14-101 11-97 (256)
384 1fmc_A 7 alpha-hydroxysteroid 30.8 61 0.0021 25.5 4.7 79 14-101 10-96 (255)
385 2g1u_A Hypothetical protein TM 30.8 63 0.0022 23.9 4.5 74 14-102 18-93 (155)
386 2rhc_B Actinorhodin polyketide 30.8 65 0.0022 26.3 5.0 79 14-101 21-107 (277)
387 3opn_A Putative hemolysin; str 30.7 2.1E+02 0.0071 22.9 11.1 127 14-172 37-183 (232)
388 3tqh_A Quinone oxidoreductase; 30.7 65 0.0022 26.9 5.0 92 11-143 149-243 (321)
389 3fbs_A Oxidoreductase; structu 30.6 72 0.0024 25.3 5.1 78 14-102 140-223 (297)
390 3nx4_A Putative oxidoreductase 30.6 1.4E+02 0.0047 24.7 7.1 90 17-144 149-240 (324)
391 3svt_A Short-chain type dehydr 30.5 79 0.0027 25.7 5.5 77 14-101 10-99 (281)
392 3krt_A Crotonyl COA reductase; 30.5 80 0.0028 28.0 5.9 54 10-77 224-279 (456)
393 4dcm_A Ribosomal RNA large sub 30.1 1.8E+02 0.006 25.3 8.0 41 91-147 98-138 (375)
394 3v8b_A Putative dehydrogenase, 30.1 61 0.0021 26.7 4.7 78 15-101 28-113 (283)
395 4eye_A Probable oxidoreductase 30.0 46 0.0016 28.2 4.0 97 10-143 155-255 (342)
396 2j3h_A NADP-dependent oxidored 29.8 1.2E+02 0.0039 25.5 6.5 95 11-143 152-253 (345)
397 3ew7_A LMO0794 protein; Q8Y8U8 29.7 1.8E+02 0.0061 21.9 8.3 71 16-104 1-72 (221)
398 2pd4_A Enoyl-[acyl-carrier-pro 29.7 1.8E+02 0.0061 23.4 7.5 77 14-101 5-92 (275)
399 3mtq_A Putative phosphoenolpyr 29.5 30 0.001 27.2 2.5 41 15-57 21-67 (159)
400 1xq1_A Putative tropinone redu 29.0 63 0.0022 25.8 4.5 79 14-101 13-100 (266)
401 3uzu_A Ribosomal RNA small sub 28.8 2.5E+02 0.0087 23.3 8.8 81 13-103 41-124 (279)
402 3ksu_A 3-oxoacyl-acyl carrier 28.4 2.3E+02 0.0078 22.7 11.1 125 14-145 10-147 (262)
403 1yxm_A Pecra, peroxisomal tran 27.9 93 0.0032 25.3 5.5 78 15-101 18-108 (303)
404 4a0s_A Octenoyl-COA reductase/ 27.8 1.3E+02 0.0046 26.3 6.8 53 10-76 216-270 (447)
405 2c07_A 3-oxoacyl-(acyl-carrier 27.8 1.2E+02 0.0042 24.6 6.2 78 15-101 44-129 (285)
406 2qip_A Protein of unknown func 27.7 42 0.0014 25.8 3.1 29 16-44 111-140 (165)
407 4imr_A 3-oxoacyl-(acyl-carrier 27.7 84 0.0029 25.7 5.1 78 15-101 33-117 (275)
408 2h7i_A Enoyl-[acyl-carrier-pro 27.5 2.2E+02 0.0074 22.8 7.6 74 14-100 6-94 (269)
409 3ic5_A Putative saccharopine d 27.5 1.4E+02 0.0049 20.0 6.6 73 15-102 5-78 (118)
410 2hq1_A Glucose/ribitol dehydro 27.5 71 0.0024 25.0 4.5 77 14-101 4-91 (247)
411 2q5c_A NTRC family transcripti 27.5 95 0.0033 24.7 5.3 53 16-77 95-148 (196)
412 1qyd_A Pinoresinol-lariciresin 27.5 1.1E+02 0.0037 24.8 5.8 81 15-104 4-87 (313)
413 1mio_A Nitrogenase molybdenum 27.4 52 0.0018 30.6 4.1 40 12-51 332-372 (533)
414 2zat_A Dehydrogenase/reductase 27.2 65 0.0022 25.8 4.3 79 14-101 13-99 (260)
415 3tka_A Ribosomal RNA small sub 27.2 30 0.001 30.8 2.4 34 112-146 240-275 (347)
416 3itj_A Thioredoxin reductase 1 27.1 44 0.0015 27.2 3.3 64 14-85 172-237 (338)
417 2gk3_A Putative cytoplasmic pr 26.8 97 0.0033 25.5 5.4 43 60-103 42-88 (256)
418 4gx0_A TRKA domain protein; me 26.7 1E+02 0.0035 28.1 6.0 72 13-99 125-198 (565)
419 1geg_A Acetoin reductase; SDR 26.7 85 0.0029 25.1 4.9 78 15-101 2-87 (256)
420 1wg8_A Predicted S-adenosylmet 26.5 32 0.0011 29.8 2.3 33 112-145 199-233 (285)
421 2bd0_A Sepiapterin reductase; 26.5 93 0.0032 24.3 5.1 77 15-100 2-93 (244)
422 3iup_A Putative NADPH:quinone 26.1 39 0.0014 29.2 2.9 51 13-77 169-222 (379)
423 3gms_A Putative NADPH:quinone 26.1 57 0.0019 27.5 3.9 76 10-99 140-219 (340)
424 1ae1_A Tropinone reductase-I; 25.9 1.1E+02 0.0039 24.6 5.6 78 15-101 21-107 (273)
425 3eag_A UDP-N-acetylmuramate:L- 25.9 2.8E+02 0.0096 23.3 8.3 72 15-105 4-77 (326)
426 3tfo_A Putative 3-oxoacyl-(acy 25.8 1E+02 0.0035 25.1 5.4 78 15-101 4-89 (264)
427 3rih_A Short chain dehydrogena 25.7 80 0.0027 26.3 4.7 78 14-100 40-126 (293)
428 3tbf_A Glucosamine--fructose-6 25.7 1.5E+02 0.0051 25.8 6.7 68 6-79 218-311 (372)
429 3gk3_A Acetoacetyl-COA reducta 25.6 63 0.0022 26.1 4.0 79 15-101 25-111 (269)
430 3pk0_A Short-chain dehydrogena 25.3 93 0.0032 25.1 4.9 78 14-100 9-95 (262)
431 3afn_B Carbonyl reductase; alp 25.2 95 0.0032 24.3 4.9 80 14-101 6-93 (258)
432 2qq5_A DHRS1, dehydrogenase/re 25.2 97 0.0033 24.8 5.0 78 15-101 5-91 (260)
433 3cvo_A Methyltransferase-like 25.1 2.7E+02 0.0091 22.4 10.2 97 13-141 29-150 (202)
434 3e03_A Short chain dehydrogena 25.0 57 0.002 26.6 3.6 86 14-101 5-98 (274)
435 3ics_A Coenzyme A-disulfide re 25.0 51 0.0018 30.1 3.6 83 14-100 186-277 (588)
436 4dup_A Quinone oxidoreductase; 25.0 81 0.0028 26.8 4.7 99 10-144 163-264 (353)
437 1sny_A Sniffer CG10964-PA; alp 24.9 1.8E+02 0.006 23.0 6.5 78 14-101 20-110 (267)
438 3nyw_A Putative oxidoreductase 24.6 90 0.0031 25.0 4.7 77 14-101 6-95 (250)
439 1w6u_A 2,4-dienoyl-COA reducta 24.6 1.8E+02 0.0061 23.5 6.6 79 14-101 25-112 (302)
440 4iiu_A 3-oxoacyl-[acyl-carrier 24.6 93 0.0032 25.0 4.8 80 14-101 25-112 (267)
441 2bgk_A Rhizome secoisolaricire 24.3 95 0.0033 24.7 4.8 79 14-101 15-100 (278)
442 1o94_A Tmadh, trimethylamine d 24.3 1.6E+02 0.0053 28.0 7.0 65 14-84 527-598 (729)
443 1uuf_A YAHK, zinc-type alcohol 24.2 95 0.0032 26.7 5.0 36 11-48 191-227 (369)
444 3cxt_A Dehydrogenase with diff 24.1 82 0.0028 26.1 4.4 76 15-101 34-119 (291)
445 1iy8_A Levodione reductase; ox 24.0 1.2E+02 0.0043 24.2 5.5 76 14-100 12-99 (267)
446 2wyu_A Enoyl-[acyl carrier pro 23.9 2.2E+02 0.0075 22.6 7.0 76 14-101 7-94 (261)
447 2uvd_A 3-oxoacyl-(acyl-carrier 23.8 1.1E+02 0.0036 24.3 4.9 78 15-100 4-89 (246)
448 3u7q_B Nitrogenase molybdenum- 23.8 86 0.003 29.0 4.9 32 12-45 361-393 (523)
449 3imf_A Short chain dehydrogena 23.7 74 0.0025 25.6 4.0 79 14-101 5-91 (257)
450 2fr1_A Erythromycin synthase, 23.6 1.5E+02 0.0052 26.7 6.5 84 11-101 222-314 (486)
451 2o1s_A 1-deoxy-D-xylulose-5-ph 23.6 1.7E+02 0.0059 27.3 7.0 33 14-48 143-180 (621)
452 3slk_A Polyketide synthase ext 23.6 2.1E+02 0.007 27.8 7.7 84 11-100 526-618 (795)
453 3tox_A Short chain dehydrogena 23.5 71 0.0024 26.3 3.9 79 14-101 7-93 (280)
454 3oid_A Enoyl-[acyl-carrier-pro 23.5 2.8E+02 0.0096 22.1 8.8 80 14-101 3-90 (258)
455 3dk9_A Grase, GR, glutathione 23.4 56 0.0019 28.9 3.5 67 14-84 186-255 (478)
456 3ezl_A Acetoacetyl-COA reducta 23.1 67 0.0023 25.5 3.6 82 12-101 10-99 (256)
457 3gqv_A Enoyl reductase; medium 23.1 2.6E+02 0.0089 23.7 7.7 33 13-47 163-197 (371)
458 4eqs_A Coenzyme A disulfide re 23.0 87 0.003 27.6 4.6 82 15-100 147-235 (437)
459 2yqu_A 2-oxoglutarate dehydrog 23.0 44 0.0015 29.4 2.6 83 14-100 166-259 (455)
460 2obb_A Hypothetical protein; s 22.9 31 0.0011 26.5 1.4 48 57-104 26-78 (142)
461 2z1n_A Dehydrogenase; reductas 22.9 1.3E+02 0.0044 24.0 5.4 78 14-101 6-93 (260)
462 3igf_A ALL4481 protein; two-do 22.9 89 0.003 27.6 4.6 16 91-106 122-137 (374)
463 3lk7_A UDP-N-acetylmuramoylala 22.9 2.8E+02 0.0095 24.5 8.0 75 14-105 8-83 (451)
464 2yvq_A Carbamoyl-phosphate syn 22.7 1.2E+02 0.0043 22.7 4.9 16 89-105 92-107 (143)
465 3h8l_A NADH oxidase; membrane 22.6 98 0.0033 26.5 4.8 43 63-105 224-270 (409)
466 3c1o_A Eugenol synthase; pheny 22.6 1.7E+02 0.006 23.7 6.2 81 14-102 3-86 (321)
467 3klj_A NAD(FAD)-dependent dehy 22.5 49 0.0017 28.8 2.8 77 15-100 146-226 (385)
468 1yb5_A Quinone oxidoreductase; 22.4 1.1E+02 0.0036 26.1 4.9 98 10-143 166-267 (351)
469 3evf_A RNA-directed RNA polyme 22.3 1.2E+02 0.004 26.2 5.1 49 89-147 136-186 (277)
470 3n74_A 3-ketoacyl-(acyl-carrie 22.2 2.9E+02 0.0098 21.7 7.7 75 14-101 8-91 (261)
471 1g0o_A Trihydroxynaphthalene r 22.1 3.1E+02 0.011 22.0 9.3 79 15-101 29-115 (283)
472 2ew8_A (S)-1-phenylethanol deh 21.9 1.5E+02 0.0051 23.5 5.5 77 14-101 6-90 (249)
473 2l69_A Rossmann 2X3 fold prote 21.9 24 0.00081 26.3 0.5 26 60-85 64-92 (134)
474 2vdc_G Glutamate synthase [NAD 21.9 1.8E+02 0.0062 25.9 6.6 66 14-84 263-329 (456)
475 1vf5_H Protein PET N; photosyn 21.5 37 0.0013 19.6 1.2 8 26-33 15-22 (29)
476 1xg5_A ARPG836; short chain de 21.3 3.1E+02 0.011 21.8 9.3 79 14-101 31-119 (279)
477 3edm_A Short chain dehydrogena 20.9 3.2E+02 0.011 21.7 8.6 80 14-101 7-94 (259)
478 1q90_N Cytochrome B6F complex 20.8 39 0.0013 19.8 1.2 9 26-34 17-25 (31)
479 2j8z_A Quinone oxidoreductase; 20.8 1.2E+02 0.0041 25.7 5.0 97 11-143 159-259 (354)
480 3uog_A Alcohol dehydrogenase; 20.7 3E+02 0.01 23.2 7.5 99 10-144 185-286 (363)
481 1h5q_A NADP-dependent mannitol 20.6 2E+02 0.0069 22.5 6.0 78 15-101 14-100 (265)
482 1iz0_A Quinone oxidoreductase; 20.6 77 0.0026 26.1 3.6 35 12-48 123-159 (302)
483 2z5l_A Tylkr1, tylactone synth 20.4 1.8E+02 0.0062 26.5 6.3 85 11-101 255-343 (511)
484 1vl8_A Gluconate 5-dehydrogena 20.4 1.1E+02 0.0038 24.7 4.5 78 15-101 21-107 (267)
485 2px2_A Genome polyprotein [con 20.2 1.2E+02 0.0042 26.0 4.8 118 3-148 64-186 (269)
486 3r8s_R 50S ribosomal protein L 20.2 40 0.0014 24.8 1.4 30 16-48 36-65 (103)
487 4eue_A Putative reductase CA_C 20.1 1.2E+02 0.0042 27.2 5.0 88 12-100 57-158 (418)
488 3qlj_A Short chain dehydrogena 20.1 1E+02 0.0034 25.8 4.2 85 14-101 26-122 (322)
489 2gag_A Heterotetrameric sarcos 20.1 1.6E+02 0.0056 29.0 6.3 61 14-85 283-344 (965)
No 1
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=98.07 E-value=0.00011 Score=58.45 Aligned_cols=158 Identities=15% Similarity=0.047 Sum_probs=99.0
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccC
Q 044601 12 YSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRT 91 (213)
Q Consensus 12 y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~ 91 (213)
..++.+||=+|=|.=.++..|++.+++...++|.-.+ ++..+ .+..|++...-....-+..-|+..+.... .
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s--~~~~~---~a~~~~~~~~~~~~v~~~~~d~~~~~~~~---~ 91 (197)
T 3eey_A 20 VKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQ--DKAIA---NTTKKLTDLNLIDRVTLIKDGHQNMDKYI---D 91 (197)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSC--HHHHH---HHHHHHHHTTCGGGEEEECSCGGGGGGTC---C
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECC--HHHHH---HHHHHHHHcCCCCCeEEEECCHHHHhhhc---c
Confidence 3567899999999989999999998645577665544 33333 24555544311112345667887775432 3
Q ss_pred CcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCCCCcccHHh---HHH---HhCc
Q 044601 92 HKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDPYNKWELVK---KAE---KIGL 165 (213)
Q Consensus 92 ~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py~~W~i~~---lA~---~~gl 165 (213)
..||.|++|+|....... .+..+......+++.+..+|+ ++|.+.+....+.+........ ..+ ..++
T Consensus 92 ~~fD~v~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~~~~Lk-~gG~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 165 (197)
T 3eey_A 92 CPVKAVMFNLGYLPSGDH-----SISTRPETTIQALSKAMELLV-TGGIITVVIYYGGDTGFEEKEKVLEFLKGVDQKKF 165 (197)
T ss_dssp SCEEEEEEEESBCTTSCT-----TCBCCHHHHHHHHHHHHHHEE-EEEEEEEEECCBTTTBSHHHHHHHHHHTTSCTTTE
T ss_pred CCceEEEEcCCcccCccc-----ccccCcccHHHHHHHHHHhCc-CCCEEEEEEccCCCCcHHHHHHHHHHHHhCCCCcE
Confidence 789999999977442111 122333445569999999998 9999999886654433222222 222 3467
Q ss_pred EEEEEeecCCCCCCCCcc
Q 044601 166 TLQEVVPFCKQDYPGYDN 183 (213)
Q Consensus 166 ~l~~~~~F~~~~yPgY~~ 183 (213)
.+.....+....-|+|-.
T Consensus 166 ~v~~~~~~~~~~~pp~~~ 183 (197)
T 3eey_A 166 IVQRTDFINQANCPPILV 183 (197)
T ss_dssp EEEEEEETTCCSCCCEEE
T ss_pred EEEEEEeccCccCCCeEE
Confidence 777766666656666653
No 2
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=97.92 E-value=0.00015 Score=58.93 Aligned_cols=147 Identities=23% Similarity=0.309 Sum_probs=93.2
Q ss_pred ccccCCCC-CCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCC
Q 044601 7 KWSNHYSS-KQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQ 85 (213)
Q Consensus 7 k~~~~y~~-~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~ 85 (213)
.|...|.+ ..+||=||=|.=.|+..|++... ..+++|.-.+ .+.+ + .+..|++...-.++. +..-|+..+..
T Consensus 33 ~~~~~f~~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~gvD~s-~~~l-~---~a~~~~~~~~~~~v~-~~~~d~~~~~~ 105 (214)
T 1yzh_A 33 KWRDLFGNDNPIHVEVGSGKGAFVSGMAKQNP-DINYIGIDIQ-KSVL-S---YALDKVLEVGVPNIK-LLWVDGSDLTD 105 (214)
T ss_dssp THHHHHTSCCCEEEEESCTTSHHHHHHHHHCT-TSEEEEEESC-HHHH-H---HHHHHHHHHCCSSEE-EEECCSSCGGG
T ss_pred CHHHHcCCCCCeEEEEccCcCHHHHHHHHHCC-CCCEEEEEcC-HHHH-H---HHHHHHHHcCCCCEE-EEeCCHHHHHh
Confidence 45545543 68999999999899999998863 5677776554 2222 2 245555544322333 44568877653
Q ss_pred CccccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCCCCcccHHhHHHHhCc
Q 044601 86 HFFLRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDPYNKWELVKKAEKIGL 165 (213)
Q Consensus 86 ~~~l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py~~W~i~~lA~~~gl 165 (213)
.+ ....||.|+.|||..-.+... ...+.....|+..+..+|+ ++|.+++... ..++.. .+..+.++.|+
T Consensus 106 ~~--~~~~~D~i~~~~~~~~~~~~~------~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~-~~~~~~-~~~~~~~~~g~ 174 (214)
T 1yzh_A 106 YF--EDGEIDRLYLNFSDPWPKKRH------EKRRLTYKTFLDTFKRILP-ENGEIHFKTD-NRGLFE-YSLVSFSQYGM 174 (214)
T ss_dssp TS--CTTCCSEEEEESCCCCCSGGG------GGGSTTSHHHHHHHHHHSC-TTCEEEEEES-CHHHHH-HHHHHHHHHTC
T ss_pred hc--CCCCCCEEEEECCCCccccch------hhhccCCHHHHHHHHHHcC-CCcEEEEEeC-CHHHHH-HHHHHHHHCCC
Confidence 32 356799999999965432110 1112235678999999998 9999988752 222332 34455566799
Q ss_pred EEEEEe
Q 044601 166 TLQEVV 171 (213)
Q Consensus 166 ~l~~~~ 171 (213)
.+....
T Consensus 175 ~~~~~~ 180 (214)
T 1yzh_A 175 KLNGVW 180 (214)
T ss_dssp EEEEEE
T ss_pred eeeecc
Confidence 887764
No 3
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=97.78 E-value=0.0005 Score=53.49 Aligned_cols=129 Identities=19% Similarity=0.252 Sum_probs=88.8
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCC
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTH 92 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~ 92 (213)
.+..+||=||=|.=.++..|++. +.+++++-.+. ++.+ .+..++ .++.+ ...|+.++. +...
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~~~--~~~~---~a~~~~-----~~~~~-~~~d~~~~~----~~~~ 106 (195)
T 3cgg_A 45 PRGAKILDAGCGQGRIGGYLSKQ---GHDVLGTDLDP--ILID---YAKQDF-----PEARW-VVGDLSVDQ----ISET 106 (195)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHT---TCEEEEEESCH--HHHH---HHHHHC-----TTSEE-EECCTTTSC----CCCC
T ss_pred cCCCeEEEECCCCCHHHHHHHHC---CCcEEEEcCCH--HHHH---HHHHhC-----CCCcE-EEcccccCC----CCCC
Confidence 46789999999998999999876 34777765552 2222 122222 13444 345776653 2357
Q ss_pred cccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCCCCcccHHhHHHHhCcEEEEEe
Q 044601 93 KFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDPYNKWELVKKAEKIGLTLQEVV 171 (213)
Q Consensus 93 ~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py~~W~i~~lA~~~gl~l~~~~ 171 (213)
.||.|+.+.|-.... ...-+..++..+..+|+ ++|.+.++......+..-.+..+.+++|+.+.+..
T Consensus 107 ~~D~i~~~~~~~~~~-----------~~~~~~~~l~~~~~~l~-~~G~l~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 173 (195)
T 3cgg_A 107 DFDLIVSAGNVMGFL-----------AEDGREPALANIHRALG-ADGRAVIGFGAGRGWVFGDFLEVAERVGLELENAF 173 (195)
T ss_dssp CEEEEEECCCCGGGS-----------CHHHHHHHHHHHHHHEE-EEEEEEEEEETTSSCCHHHHHHHHHHHTEEEEEEE
T ss_pred ceeEEEECCcHHhhc-----------ChHHHHHHHHHHHHHhC-CCCEEEEEeCCCCCcCHHHHHHHHHHcCCEEeeee
Confidence 899999985433321 11234678889999998 99999998877766777788888999999988764
No 4
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=97.72 E-value=0.0011 Score=53.77 Aligned_cols=144 Identities=15% Similarity=0.161 Sum_probs=89.1
Q ss_pred CCCCCeEEEEecC-ChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCcccc
Q 044601 12 YSSKQRILLVGEG-DFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLR 90 (213)
Q Consensus 12 y~~~~~ILlVGEG-nFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~ 90 (213)
..++.+||=+|=| .=.++..|++.. +..++|+-.+. + ..+ .+..|++...- .+++ ..-|+..+... .
T Consensus 53 ~~~~~~vLDlG~G~~G~~~~~la~~~--~~~v~~vD~s~-~-~~~---~a~~~~~~~~~-~v~~-~~~d~~~~~~~---~ 120 (230)
T 3evz_A 53 LRGGEVALEIGTGHTAMMALMAEKFF--NCKVTATEVDE-E-FFE---YARRNIERNNS-NVRL-VKSNGGIIKGV---V 120 (230)
T ss_dssp CCSSCEEEEECCTTTCHHHHHHHHHH--CCEEEEEECCH-H-HHH---HHHHHHHHTTC-CCEE-EECSSCSSTTT---C
T ss_pred cCCCCEEEEcCCCHHHHHHHHHHHhc--CCEEEEEECCH-H-HHH---HHHHHHHHhCC-CcEE-EeCCchhhhhc---c
Confidence 3568999999999 888888998886 46787776663 2 222 24555544322 3443 34566544332 2
Q ss_pred CCcccEEEEcCCcCCCcccccchHHH------HhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCCCCcccHHhHHHHhC
Q 044601 91 THKFDRVIYNFPHVGFIFRENSYCQI------QLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDPYNKWELVKKAEKIG 164 (213)
Q Consensus 91 ~~~FDrIiFNFPH~G~~~~e~~~~~i------~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py~~W~i~~lA~~~g 164 (213)
..+||.|+.|.|.......+. .... .....++..|++.+..+|+ ++|.+.+.+..+. ...-.+..+.++.|
T Consensus 121 ~~~fD~I~~npp~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~~~-~~~~~~~~~l~~~g 197 (230)
T 3evz_A 121 EGTFDVIFSAPPYYDKPLGRV-LTEREAIGGGKYGEEFSVKLLEEAFDHLN-PGGKVALYLPDKE-KLLNVIKERGIKLG 197 (230)
T ss_dssp CSCEEEEEECCCCC----------------CCSSSCHHHHHHHHHHGGGEE-EEEEEEEEEESCH-HHHHHHHHHHHHTT
T ss_pred cCceeEEEECCCCcCCccccc-cChhhhhccCccchHHHHHHHHHHHHHhC-CCeEEEEEecccH-hHHHHHHHHHHHcC
Confidence 478999999988755321000 0000 0122446889999999998 9999998765432 23345666778889
Q ss_pred cEEEEE
Q 044601 165 LTLQEV 170 (213)
Q Consensus 165 l~l~~~ 170 (213)
+.+...
T Consensus 198 ~~~~~~ 203 (230)
T 3evz_A 198 YSVKDI 203 (230)
T ss_dssp CEEEEE
T ss_pred CceEEE
Confidence 976654
No 5
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=97.71 E-value=0.00017 Score=62.83 Aligned_cols=145 Identities=14% Similarity=0.183 Sum_probs=91.8
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHH----hCCCEEEEeeeccccCCCcc
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELE----ERGCLVFYGVDAMQMSQHFF 88 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~----~~g~~V~~gVDAt~L~~~~~ 88 (213)
.+..+||.||=|+=.++..|+++. +...|++.-.|. ++.+ -+.+++..+. ...+++ +.-|+.++....
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~--~~i~---~a~~~~~~~~~~~~~~~v~~-~~~D~~~~~~~~- 165 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHG-TVEHCDLVDIDG--EVME---QSKQHFPQISRSLADPRATV-RVGDGLAFVRQT- 165 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCT-TCCEEEEEESCH--HHHH---HHHHHCHHHHGGGGCTTEEE-EESCHHHHHHSS-
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCC-CCCEEEEEECCH--HHHH---HHHHHhHHhhcccCCCcEEE-EECcHHHHHHhc-
Confidence 467899999999999999999864 356788877763 2222 1334444332 223444 444776643210
Q ss_pred ccCCcccEEEEcCCcCCCcccccchHHHHhhHHHH-HHHHHHHHhhcccCCCeEEEEeccCCCC----CcccHHhHHHHh
Q 044601 89 LRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELV-KGFLRNAKLLLKEENGEIHVTHKEGDPY----NKWELVKKAEKI 163 (213)
Q Consensus 89 l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll-~~Ff~Sa~~~L~~~~G~ihvTl~~~~py----~~W~i~~lA~~~ 163 (213)
...+||.||.|.|..-. ....|. ..||+.+..+|+ ++|.+.+..- .|+ ..+.+....++.
T Consensus 166 -~~~~fDvIi~d~~~~~~-----------~~~~l~~~~~l~~~~~~Lk-pgG~lv~~~~--~~~~~~~~~~~~~~~l~~~ 230 (304)
T 3bwc_A 166 -PDNTYDVVIIDTTDPAG-----------PASKLFGEAFYKDVLRILK-PDGICCNQGE--SIWLDLELIEKMSRFIRET 230 (304)
T ss_dssp -CTTCEEEEEEECC--------------------CCHHHHHHHHHHEE-EEEEEEEEEC--CTTTCHHHHHHHHHHHHHH
T ss_pred -cCCceeEEEECCCCccc-----------cchhhhHHHHHHHHHHhcC-CCcEEEEecC--CcccchHHHHHHHHHHHhC
Confidence 24689999999876432 112232 689999999998 9999888743 232 346677777888
Q ss_pred CcEEEEEeecCCCCCCC
Q 044601 164 GLTLQEVVPFCKQDYPG 180 (213)
Q Consensus 164 gl~l~~~~~F~~~~yPg 180 (213)
||...+........||+
T Consensus 231 GF~~v~~~~~~vP~yp~ 247 (304)
T 3bwc_A 231 GFASVQYALMHVPTYPC 247 (304)
T ss_dssp TCSEEEEEECCCTTSTT
T ss_pred CCCcEEEEEeecccccC
Confidence 99877776665555653
No 6
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=97.69 E-value=0.0003 Score=57.62 Aligned_cols=146 Identities=21% Similarity=0.289 Sum_probs=91.9
Q ss_pred ccccCCCC-CCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCC
Q 044601 7 KWSNHYSS-KQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQ 85 (213)
Q Consensus 7 k~~~~y~~-~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~ 85 (213)
.|...|.+ ..+||=||=|.=.++..||+.+ +..+++|.-.. ++..+ .+..|++...-.++. +...|+..+..
T Consensus 30 ~~~~~f~~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~giD~s--~~~l~---~a~~~~~~~~~~nv~-~~~~d~~~l~~ 102 (213)
T 2fca_A 30 KWNTVFGNDNPIHIEVGTGKGQFISGMAKQN-PDINYIGIELF--KSVIV---TAVQKVKDSEAQNVK-LLNIDADTLTD 102 (213)
T ss_dssp CHHHHHTSCCCEEEEECCTTSHHHHHHHHHC-TTSEEEEECSC--HHHHH---HHHHHHHHSCCSSEE-EECCCGGGHHH
T ss_pred CHHHHcCCCCceEEEEecCCCHHHHHHHHHC-CCCCEEEEEec--hHHHH---HHHHHHHHcCCCCEE-EEeCCHHHHHh
Confidence 56656654 6899999999888999999886 35678776554 22222 145555433212334 44568887643
Q ss_pred CccccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCCCCcccHHhHHHHhCc
Q 044601 86 HFFLRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDPYNKWELVKKAEKIGL 165 (213)
Q Consensus 86 ~~~l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py~~W~i~~lA~~~gl 165 (213)
. +....||.|+.|||..-.+... ...+.+...|+..+..+|+ ++|.+++... ...+..|-+..+. ..|+
T Consensus 103 ~--~~~~~~d~v~~~~~~p~~~~~~------~~~rl~~~~~l~~~~~~Lk-pgG~l~~~td-~~~~~~~~~~~~~-~~g~ 171 (213)
T 2fca_A 103 V--FEPGEVKRVYLNFSDPWPKKRH------EKRRLTYSHFLKKYEEVMG-KGGSIHFKTD-NRGLFEYSLKSFS-EYGL 171 (213)
T ss_dssp H--CCTTSCCEEEEESCCCCCSGGG------GGGSTTSHHHHHHHHHHHT-TSCEEEEEES-CHHHHHHHHHHHH-HHTC
T ss_pred h--cCcCCcCEEEEECCCCCcCccc------cccccCcHHHHHHHHHHcC-CCCEEEEEeC-CHHHHHHHHHHHH-HCCC
Confidence 2 2356799999999865332111 1122224688999999998 9999998763 2334455454444 5688
Q ss_pred EEEEE
Q 044601 166 TLQEV 170 (213)
Q Consensus 166 ~l~~~ 170 (213)
.+...
T Consensus 172 ~~~~~ 176 (213)
T 2fca_A 172 LLTYV 176 (213)
T ss_dssp EEEEE
T ss_pred ccccc
Confidence 77654
No 7
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=97.67 E-value=0.0013 Score=51.59 Aligned_cols=121 Identities=9% Similarity=0.037 Sum_probs=74.8
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccC
Q 044601 12 YSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRT 91 (213)
Q Consensus 12 y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~ 91 (213)
..++.+||=+|=|.=.++..|++. +..|+|.-.+ +++.+ .+..|++...-..++++. -|+..+.... .
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~la~~---~~~v~~vD~s--~~~l~---~a~~~~~~~~~~~v~~~~-~~~~~l~~~~---~ 87 (185)
T 3mti_A 20 LDDESIVVDATMGNGNDTAFLAGL---SKKVYAFDVQ--EQALG---KTSQRLSDLGIENTELIL-DGHENLDHYV---R 87 (185)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHTT---SSEEEEEESC--HHHHH---HHHHHHHHHTCCCEEEEE-SCGGGGGGTC---C
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEECC--HHHHH---HHHHHHHHcCCCcEEEEe-CcHHHHHhhc---c
Confidence 356799999999988888899876 4577665444 33333 255666554333455555 5666654332 4
Q ss_pred CcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCC
Q 044601 92 HKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDP 150 (213)
Q Consensus 92 ~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~p 150 (213)
..||.|++|+|+..... ..+.....-...+++.+..+|+ |+|.+.|+...+.+
T Consensus 88 ~~fD~v~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~i~~~~~~~ 140 (185)
T 3mti_A 88 EPIRAAIFNLGYLPSAD-----KSVITKPHTTLEAIEKILDRLE-VGGRLAIMIYYGHD 140 (185)
T ss_dssp SCEEEEEEEEC----------------CHHHHHHHHHHHHHHEE-EEEEEEEEEC----
T ss_pred CCcCEEEEeCCCCCCcc-----hhcccChhhHHHHHHHHHHhcC-CCcEEEEEEeCCCC
Confidence 68999999987665311 1233344455677889999998 99999999876654
No 8
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=97.62 E-value=0.0013 Score=57.44 Aligned_cols=146 Identities=13% Similarity=0.144 Sum_probs=97.8
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCC
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTH 92 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~ 92 (213)
.++.+||=+|=|.=.++..|++..+....|+|.-.+. . ..+ .+..|++.+.-.++. +..-|++++.. ...
T Consensus 117 ~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~-~-~l~---~a~~~~~~~g~~~v~-~~~~D~~~~~~----~~~ 186 (315)
T 1ixk_A 117 KPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDE-N-RLR---ETRLNLSRLGVLNVI-LFHSSSLHIGE----LNV 186 (315)
T ss_dssp CTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCH-H-HHH---HHHHHHHHHTCCSEE-EESSCGGGGGG----GCC
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCH-H-HHH---HHHHHHHHhCCCeEE-EEECChhhccc----ccc
Confidence 4678999998888888999998875456777765542 2 222 255666655322333 45568887653 145
Q ss_pred cccEEEEcCCcCCCcccc--------cchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCCC-CcccHHhHHHHh
Q 044601 93 KFDRVIYNFPHVGFIFRE--------NSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDPY-NKWELVKKAEKI 163 (213)
Q Consensus 93 ~FDrIiFNFPH~G~~~~e--------~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py-~~W~i~~lA~~~ 163 (213)
.||+|+.|-|..|.+... .....+.....+-..++..+..+|+ ++|.+.++-|+-.|- +.-.|..+.++.
T Consensus 187 ~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~Lk-pGG~lv~stcs~~~~Ene~~v~~~l~~~ 265 (315)
T 1ixk_A 187 EFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLK-PGGILVYSTCSLEPEENEFVIQWALDNF 265 (315)
T ss_dssp CEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEE-EEEEEEEEESCCCGGGTHHHHHHHHHHS
T ss_pred cCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCC-CCCEEEEEeCCCChHHhHHHHHHHHhcC
Confidence 799999999987743210 0123344455667899999999998 999998877765443 445566677778
Q ss_pred CcEEEE
Q 044601 164 GLTLQE 169 (213)
Q Consensus 164 gl~l~~ 169 (213)
++.+..
T Consensus 266 ~~~~~~ 271 (315)
T 1ixk_A 266 DVELLP 271 (315)
T ss_dssp SEEEEC
T ss_pred CCEEec
Confidence 877653
No 9
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=97.56 E-value=0.0012 Score=55.37 Aligned_cols=149 Identities=18% Similarity=0.182 Sum_probs=94.3
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCCc
Q 044601 14 SKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTHK 93 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~~ 93 (213)
++.+||=+|=|.=.+++.|++.. +..|+|.-.+ ++..+ .+..|++...-.+-..+..-|+.++.... ...+
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~--~~~v~gvDi~--~~~~~---~a~~n~~~~~~~~~v~~~~~D~~~~~~~~--~~~~ 119 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRT--KAKIVGVEIQ--ERLAD---MAKRSVAYNQLEDQIEIIEYDLKKITDLI--PKER 119 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTC--CCEEEEECCS--HHHHH---HHHHHHHHTTCTTTEEEECSCGGGGGGTS--CTTC
T ss_pred CCCEEEEcCCchhHHHHHHHHhc--CCcEEEEECC--HHHHH---HHHHHHHHCCCcccEEEEECcHHHhhhhh--ccCC
Confidence 67899999999999999999874 2377766555 32332 25566654322222345667888875432 3578
Q ss_pred ccEEEEcCCcCCCc--cc--ccchHHHHhh--HHHHHHHHHHHHhhcccCCCeEEEEeccCCCCCcccHHhHHHHhCcEE
Q 044601 94 FDRVIYNFPHVGFI--FR--ENSYCQIQLN--KELVKGFLRNAKLLLKEENGEIHVTHKEGDPYNKWELVKKAEKIGLTL 167 (213)
Q Consensus 94 FDrIiFNFPH~G~~--~~--e~~~~~i~~n--~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py~~W~i~~lA~~~gl~l 167 (213)
||.||.|-|..... +. .+..+.+..+ ...+..|++.+..+|+ ++|.+.+.+. +...-.+..+++..|+..
T Consensus 120 fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~---~~~~~~~~~~l~~~~~~~ 195 (259)
T 3lpm_A 120 ADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLK-QGGKANFVHR---PERLLDIIDIMRKYRLEP 195 (259)
T ss_dssp EEEEEECCCC-----------------------HHHHHHHHHHHHHEE-EEEEEEEEEC---TTTHHHHHHHHHHTTEEE
T ss_pred ccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHcc-CCcEEEEEEc---HHHHHHHHHHHHHCCCce
Confidence 99999999965431 11 0111112111 2456789999999998 9999998652 344556777888889998
Q ss_pred EEEeecCC
Q 044601 168 QEVVPFCK 175 (213)
Q Consensus 168 ~~~~~F~~ 175 (213)
.+..+..+
T Consensus 196 ~~~~~v~~ 203 (259)
T 3lpm_A 196 KRIQFVHP 203 (259)
T ss_dssp EEEEEEES
T ss_pred EEEEEeec
Confidence 88776643
No 10
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=97.55 E-value=0.0014 Score=52.61 Aligned_cols=140 Identities=19% Similarity=0.247 Sum_probs=94.0
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccC
Q 044601 12 YSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRT 91 (213)
Q Consensus 12 y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~ 91 (213)
..+..+||=||=|.=.++..|++..++...+++.-.+ ++..+ .+..++....-.++ .....|+..+. +..
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s--~~~~~---~a~~~~~~~~~~~~-~~~~~d~~~~~----~~~ 104 (219)
T 3dh0_A 35 LKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQ--EEMVN---YAWEKVNKLGLKNV-EVLKSEENKIP----LPD 104 (219)
T ss_dssp CCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESC--HHHHH---HHHHHHHHHTCTTE-EEEECBTTBCS----SCS
T ss_pred CCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECC--HHHHH---HHHHHHHHcCCCcE-EEEecccccCC----CCC
Confidence 3567899999999999999999987555677666544 22222 13444433321123 34556777653 345
Q ss_pred CcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCC----------CCCcccHHhHHH
Q 044601 92 HKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGD----------PYNKWELVKKAE 161 (213)
Q Consensus 92 ~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~----------py~~W~i~~lA~ 161 (213)
..||.|+.+..---.. + ...+++.+..+|+ ++|.+.|+-.... .++...+..+.+
T Consensus 105 ~~fD~v~~~~~l~~~~---~-----------~~~~l~~~~~~Lk-pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 169 (219)
T 3dh0_A 105 NTVDFIFMAFTFHELS---E-----------PLKFLEELKRVAK-PFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILE 169 (219)
T ss_dssp SCEEEEEEESCGGGCS---S-----------HHHHHHHHHHHEE-EEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHH
T ss_pred CCeeEEEeehhhhhcC---C-----------HHHHHHHHHHHhC-CCeEEEEEEecccccccCCchhcccCHHHHHHHHH
Confidence 7899999986533221 0 2468888999998 9999888753321 245567888999
Q ss_pred HhCcEEEEEeecCCC
Q 044601 162 KIGLTLQEVVPFCKQ 176 (213)
Q Consensus 162 ~~gl~l~~~~~F~~~ 176 (213)
++||..++...+...
T Consensus 170 ~~Gf~~~~~~~~~~~ 184 (219)
T 3dh0_A 170 DAGIRVGRVVEVGKY 184 (219)
T ss_dssp HTTCEEEEEEEETTT
T ss_pred HCCCEEEEEEeeCCc
Confidence 999999998877653
No 11
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=97.44 E-value=0.0016 Score=52.91 Aligned_cols=135 Identities=15% Similarity=0.098 Sum_probs=84.5
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccC
Q 044601 12 YSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRT 91 (213)
Q Consensus 12 y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~ 91 (213)
..++.+||=+|=|.=.++..|++.++....+++. |...+..+ .+..|.+.. .++.+ ...|+........+ .
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~v--D~s~~~~~---~~~~~~~~~--~~v~~-~~~d~~~~~~~~~~-~ 141 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGI--EFSPRVLR---ELVPIVEER--RNIVP-ILGDATKPEEYRAL-V 141 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEE--ESCHHHHH---HHHHHHSSC--TTEEE-EECCTTCGGGGTTT-C
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEE--ECCHHHHH---HHHHHHhcc--CCCEE-EEccCCCcchhhcc-c
Confidence 4567899999999999999999988655677666 42232222 133333322 24444 44577764321112 2
Q ss_pred CcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCC-----C---CcccHHhHHHHh
Q 044601 92 HKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDP-----Y---NKWELVKKAEKI 163 (213)
Q Consensus 92 ~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~p-----y---~~W~i~~lA~~~ 163 (213)
..||.|+.+.|+.. ....++..+..+|+ |+|.+.+....... . ....+..+ ..+
T Consensus 142 ~~~D~v~~~~~~~~----------------~~~~~l~~~~~~Lk-pgG~l~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~ 203 (227)
T 1g8a_A 142 PKVDVIFEDVAQPT----------------QAKILIDNAEVYLK-RGGYGMIAVKSRSIDVTKEPEQVFREVEREL-SEY 203 (227)
T ss_dssp CCEEEEEECCCSTT----------------HHHHHHHHHHHHEE-EEEEEEEEEEGGGTCTTSCHHHHHHHHHHHH-HTT
T ss_pred CCceEEEECCCCHh----------------HHHHHHHHHHHhcC-CCCEEEEEEecCCCCCCCChhhhhHHHHHHH-Hhh
Confidence 47999999988211 12356788999998 99999998643221 1 12345556 555
Q ss_pred CcEEEEEeecC
Q 044601 164 GLTLQEVVPFC 174 (213)
Q Consensus 164 gl~l~~~~~F~ 174 (213)
|.+.+.....
T Consensus 204 -f~~~~~~~~~ 213 (227)
T 1g8a_A 204 -FEVIERLNLE 213 (227)
T ss_dssp -SEEEEEEECT
T ss_pred -ceeeeEeccC
Confidence 8888877654
No 12
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=97.42 E-value=0.0049 Score=54.84 Aligned_cols=131 Identities=16% Similarity=0.212 Sum_probs=82.3
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccc-cCCCccccCC
Q 044601 14 SKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQ-MSQHFFLRTH 92 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~-L~~~~~l~~~ 92 (213)
++.+||=|| |.=.++..|++. +....+++.-.+ ++. .+ -+.+|++.+.-..+.++ .-|+.+ |.... ..
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~-~~~~~v~~vDi~-~~~-l~---~a~~~~~~~g~~~v~~~-~~D~~~~l~~~~---~~ 240 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLS-GLPKRIAVLDID-ERL-TK---FIEKAANEIGYEDIEIF-TFDLRKPLPDYA---LH 240 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHH-TCCSEEEEECSC-HHH-HH---HHHHHHHHHTCCCEEEE-CCCTTSCCCTTT---SS
T ss_pred CCCEEEEEC-CCCHHHHHHHHh-CCCCEEEEEECC-HHH-HH---HHHHHHHHcCCCCEEEE-EChhhhhchhhc---cC
Confidence 468999999 998899998876 333466554443 333 33 25667665421134444 448877 43211 35
Q ss_pred cccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeE-EEEeccCCCCCc---ccHHhHHH-HhCcEE
Q 044601 93 KFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEI-HVTHKEGDPYNK---WELVKKAE-KIGLTL 167 (213)
Q Consensus 93 ~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~i-hvTl~~~~py~~---W~i~~lA~-~~gl~l 167 (213)
.||.||.|-|.... . +..|+..|.++|+ ++|.+ .+.... .+.+. +.+..+.. +.|+.+
T Consensus 241 ~fD~Vi~~~p~~~~--------------~-~~~~l~~~~~~Lk-pgG~~~~~~~~~-~~~~~~~~~~~~~~l~~~~g~~~ 303 (373)
T 2qm3_A 241 KFDTFITDPPETLE--------------A-IRAFVGRGIATLK-GPRCAGYFGITR-RESSLDKWREIQKLLLNEFNVVI 303 (373)
T ss_dssp CBSEEEECCCSSHH--------------H-HHHHHHHHHHTBC-STTCEEEEEECT-TTCCHHHHHHHHHHHHHTSCCEE
T ss_pred CccEEEECCCCchH--------------H-HHHHHHHHHHHcc-cCCeEEEEEEec-CcCCHHHHHHHHHHHHHhcCcch
Confidence 79999999884321 1 3789999999998 99954 555543 12333 55666666 788877
Q ss_pred EEEee
Q 044601 168 QEVVP 172 (213)
Q Consensus 168 ~~~~~ 172 (213)
....+
T Consensus 304 ~~~~~ 308 (373)
T 2qm3_A 304 TDIIR 308 (373)
T ss_dssp EEEEE
T ss_pred hhhhh
Confidence 55543
No 13
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=97.40 E-value=0.002 Score=52.92 Aligned_cols=130 Identities=22% Similarity=0.183 Sum_probs=86.2
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHH-HhCCCEEEEeeeccccCCCcccc
Q 044601 12 YSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVREL-EERGCLVFYGVDAMQMSQHFFLR 90 (213)
Q Consensus 12 y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L-~~~g~~V~~gVDAt~L~~~~~l~ 90 (213)
..++.+||-+|=|.=+++..|++.+++...+++.-.+ ++..+ .+..|++.. ....+. ....|+.++ ++.
T Consensus 94 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~--~~~~~---~a~~~~~~~~g~~~v~-~~~~d~~~~----~~~ 163 (258)
T 2pwy_A 94 LAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEAR--PHHLA---QAERNVRAFWQVENVR-FHLGKLEEA----ELE 163 (258)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESC--HHHHH---HHHHHHHHHCCCCCEE-EEESCGGGC----CCC
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCC--HHHHH---HHHHHHHHhcCCCCEE-EEECchhhc----CCC
Confidence 4567899999999999999999997656677776554 22222 245555443 211233 444577665 133
Q ss_pred CCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCCCCcccHHhHHHHhCcEEEEE
Q 044601 91 THKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDPYNKWELVKKAEKIGLTLQEV 170 (213)
Q Consensus 91 ~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py~~W~i~~lA~~~gl~l~~~ 170 (213)
...||.|+.|.|... .++..+..+|+ ++|.+.+...... ....+....++.||...+.
T Consensus 164 ~~~~D~v~~~~~~~~-------------------~~l~~~~~~L~-~gG~l~~~~~~~~--~~~~~~~~l~~~gf~~~~~ 221 (258)
T 2pwy_A 164 EAAYDGVALDLMEPW-------------------KVLEKAALALK-PDRFLVAYLPNIT--QVLELVRAAEAHPFRLERV 221 (258)
T ss_dssp TTCEEEEEEESSCGG-------------------GGHHHHHHHEE-EEEEEEEEESCHH--HHHHHHHHHTTTTEEEEEE
T ss_pred CCCcCEEEECCcCHH-------------------HHHHHHHHhCC-CCCEEEEEeCCHH--HHHHHHHHHHHCCCceEEE
Confidence 467999999877432 56788899998 9999988774321 2344555566788887766
Q ss_pred eec
Q 044601 171 VPF 173 (213)
Q Consensus 171 ~~F 173 (213)
...
T Consensus 222 ~~~ 224 (258)
T 2pwy_A 222 LEV 224 (258)
T ss_dssp EEE
T ss_pred EEe
Confidence 543
No 14
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=97.38 E-value=0.002 Score=51.51 Aligned_cols=139 Identities=16% Similarity=0.097 Sum_probs=92.5
Q ss_pred cccCCCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCc
Q 044601 8 WSNHYSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHF 87 (213)
Q Consensus 8 ~~~~y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~ 87 (213)
++....+..+||=||=|.=.++..|++. +..+++.-.+ . ++.+. +..++ ++.+. ..|+..+.
T Consensus 37 ~~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s-~-~~~~~---a~~~~------~~~~~-~~d~~~~~--- 98 (211)
T 3e23_A 37 FLGELPAGAKILELGCGAGYQAEAMLAA---GFDVDATDGS-P-ELAAE---ASRRL------GRPVR-TMLFHQLD--- 98 (211)
T ss_dssp HHTTSCTTCEEEESSCTTSHHHHHHHHT---TCEEEEEESC-H-HHHHH---HHHHH------TSCCE-ECCGGGCC---
T ss_pred HHHhcCCCCcEEEECCCCCHHHHHHHHc---CCeEEEECCC-H-HHHHH---HHHhc------CCceE-EeeeccCC---
Confidence 3455667899999999999999999876 3466665443 2 22221 23222 44433 45777665
Q ss_pred cccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCC------------CCccc
Q 044601 88 FLRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDP------------YNKWE 155 (213)
Q Consensus 88 ~l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~p------------y~~W~ 155 (213)
....||.|+.+..-.-. ...-+..+++.+..+|+ ++|.+.|+...+.+ ++.-.
T Consensus 99 --~~~~fD~v~~~~~l~~~------------~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (211)
T 3e23_A 99 --AIDAYDAVWAHACLLHV------------PRDELADVLKLIWRALK-PGGLFYASYKSGEGEGRDKLARYYNYPSEEW 163 (211)
T ss_dssp --CCSCEEEEEECSCGGGS------------CHHHHHHHHHHHHHHEE-EEEEEEEEEECCSSCEECTTSCEECCCCHHH
T ss_pred --CCCcEEEEEecCchhhc------------CHHHHHHHHHHHHHhcC-CCcEEEEEEcCCCcccccccchhccCCCHHH
Confidence 25789999998632211 12334578888999998 99999999765432 23446
Q ss_pred HHhHHHHhC-cEEEEEeecCCCCCC
Q 044601 156 LVKKAEKIG-LTLQEVVPFCKQDYP 179 (213)
Q Consensus 156 i~~lA~~~g-l~l~~~~~F~~~~yP 179 (213)
+..+.+++| |.+++........|+
T Consensus 164 ~~~~l~~aG~f~~~~~~~~~~~~~~ 188 (211)
T 3e23_A 164 LRARYAEAGTWASVAVESSEGKGFD 188 (211)
T ss_dssp HHHHHHHHCCCSEEEEEEEEEECTT
T ss_pred HHHHHHhCCCcEEEEEEeccCCCCC
Confidence 777889999 999888776544443
No 15
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=97.37 E-value=0.004 Score=51.80 Aligned_cols=145 Identities=14% Similarity=0.099 Sum_probs=95.3
Q ss_pred CCCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCcccc
Q 044601 11 HYSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLR 90 (213)
Q Consensus 11 ~y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~ 90 (213)
...++.+||=||=|.=.++..|++. ....++++-.+. + ..+ .+..+++...-.+-.-....|+.++. +.
T Consensus 43 ~~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gvD~s~-~-~~~---~a~~~~~~~~~~~~v~~~~~d~~~~~----~~ 111 (267)
T 3kkz_A 43 NLTEKSLIADIGCGTGGQTMVLAGH--VTGQVTGLDFLS-G-FID---IFNRNARQSGLQNRVTGIVGSMDDLP----FR 111 (267)
T ss_dssp CCCTTCEEEEETCTTCHHHHHHHTT--CSSEEEEEESCH-H-HHH---HHHHHHHHTTCTTTEEEEECCTTSCC----CC
T ss_pred cCCCCCEEEEeCCCCCHHHHHHHhc--cCCEEEEEeCCH-H-HHH---HHHHHHHHcCCCcCcEEEEcChhhCC----CC
Confidence 4567899999999999999999987 355777776542 2 222 13333332211121334566776653 33
Q ss_pred CCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEecc---CCCC----Ccc---------
Q 044601 91 THKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKE---GDPY----NKW--------- 154 (213)
Q Consensus 91 ~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~---~~py----~~W--------- 154 (213)
...||.|+.+.+.--. . ...+++.+..+|+ |+|.+.|+-.. ..+. ..|
T Consensus 112 ~~~fD~i~~~~~~~~~-~--------------~~~~l~~~~~~Lk-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (267)
T 3kkz_A 112 NEELDLIWSEGAIYNI-G--------------FERGLNEWRKYLK-KGGYLAVSECSWFTDERPAEINDFWMDAYPEIDT 175 (267)
T ss_dssp TTCEEEEEESSCGGGT-C--------------HHHHHHHHGGGEE-EEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCEE
T ss_pred CCCEEEEEEcCCceec-C--------------HHHHHHHHHHHcC-CCCEEEEEEeeecCCCChHHHHHHHHHhCCCCCC
Confidence 5789999988653221 0 2468899999998 99998887432 1111 124
Q ss_pred --cHHhHHHHhCcEEEEEeecCCCCC-CCCc
Q 044601 155 --ELVKKAEKIGLTLQEVVPFCKQDY-PGYD 182 (213)
Q Consensus 155 --~i~~lA~~~gl~l~~~~~F~~~~y-PgY~ 182 (213)
.+..+.+++||..++...+....| ..|.
T Consensus 176 ~~~~~~~l~~aGf~~v~~~~~~~~~w~~~~~ 206 (267)
T 3kkz_A 176 IPNQVAKIHKAGYLPVATFILPENCWTDHYF 206 (267)
T ss_dssp HHHHHHHHHHTTEEEEEEEECCGGGTTTTTH
T ss_pred HHHHHHHHHHCCCEEEEEEECCHhHHHHHHH
Confidence 566788899999999999887767 5554
No 16
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=97.37 E-value=0.0052 Score=50.38 Aligned_cols=139 Identities=14% Similarity=0.090 Sum_probs=92.5
Q ss_pred cCCCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCC---EEEEeeeccccCCC
Q 044601 10 NHYSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGC---LVFYGVDAMQMSQH 86 (213)
Q Consensus 10 ~~y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~---~V~~gVDAt~L~~~ 86 (213)
....++.+||=||=|.=.++..|++..+ ..++++-.+ +...+ .+..++. ..|. .-...-|+..+.
T Consensus 42 ~~~~~~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s--~~~~~---~a~~~~~---~~~~~~~~~~~~~d~~~~~-- 109 (257)
T 3f4k_A 42 NELTDDAKIADIGCGTGGQTLFLADYVK--GQITGIDLF--PDFIE---IFNENAV---KANCADRVKGITGSMDNLP-- 109 (257)
T ss_dssp CCCCTTCEEEEETCTTSHHHHHHHHHCC--SEEEEEESC--HHHHH---HHHHHHH---HTTCTTTEEEEECCTTSCS--
T ss_pred hcCCCCCeEEEeCCCCCHHHHHHHHhCC--CeEEEEECC--HHHHH---HHHHHHH---HcCCCCceEEEECChhhCC--
Confidence 3456788999999999999999998864 377666554 22222 1333333 3342 335566776653
Q ss_pred ccccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEecc---CCC-------------
Q 044601 87 FFLRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKE---GDP------------- 150 (213)
Q Consensus 87 ~~l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~---~~p------------- 150 (213)
+....||.|+.+....-. . ...+++.+..+|+ |+|.+.|+-.. ..+
T Consensus 110 --~~~~~fD~v~~~~~l~~~-~--------------~~~~l~~~~~~L~-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (257)
T 3f4k_A 110 --FQNEELDLIWSEGAIYNI-G--------------FERGMNEWSKYLK-KGGFIAVSEASWFTSERPAEIEDFWMDAYP 171 (257)
T ss_dssp --SCTTCEEEEEEESCSCCC-C--------------HHHHHHHHHTTEE-EEEEEEEEEEEESSSCCCHHHHHHHHHHCT
T ss_pred --CCCCCEEEEEecChHhhc-C--------------HHHHHHHHHHHcC-CCcEEEEEEeeccCCCChHHHHHHHHHhCC
Confidence 335789999998543221 0 1368889999998 99998887532 111
Q ss_pred --CCcccHHhHHHHhCcEEEEEeecCCCCC
Q 044601 151 --YNKWELVKKAEKIGLTLQEVVPFCKQDY 178 (213)
Q Consensus 151 --y~~W~i~~lA~~~gl~l~~~~~F~~~~y 178 (213)
.+.-.+..+.+++||..+....+....|
T Consensus 172 ~~~~~~~~~~~l~~aGf~~v~~~~~~~~~w 201 (257)
T 3f4k_A 172 EISVIPTCIDKMERAGYTPTAHFILPENCW 201 (257)
T ss_dssp TCCBHHHHHHHHHHTTEEEEEEEECCGGGT
T ss_pred CCCCHHHHHHHHHHCCCeEEEEEECChhhH
Confidence 1122356788899999999998887777
No 17
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=97.32 E-value=0.00084 Score=55.84 Aligned_cols=143 Identities=18% Similarity=0.301 Sum_probs=89.7
Q ss_pred cccccCCCC-----------CCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhC----
Q 044601 6 EKWSNHYSS-----------KQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEER---- 70 (213)
Q Consensus 6 ~k~~~~y~~-----------~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~---- 70 (213)
-.|...|.. ..+||=||=|.=.|+..||+... ..++++.-.. +.+.+ .+.+|++.++..
T Consensus 30 ~~w~~~f~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~-~~~v~gvD~s--~~~l~---~a~~~~~~~~~~~~~~ 103 (246)
T 2vdv_E 30 MDWSKLYPYYKNAENGQMTKKVTIADIGCGFGGLMIDLSPAFP-EDLILGMEIR--VQVTN---YVEDRIIALRNNTASK 103 (246)
T ss_dssp CCGGGTCGGGBC----CBSCCEEEEEETCTTSHHHHHHHHHST-TSEEEEEESC--HHHHH---HHHHHHHHHHHTC-CC
T ss_pred CCHHHHhCcccccccccCCCCCEEEEEcCCCCHHHHHHHHhCC-CCCEEEEEcC--HHHHH---HHHHHHHHHhhccccc
Confidence 357777764 67899999999999999998863 4566665443 33333 256677666321
Q ss_pred -C--CEEEEeeeccc-cCCCccccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEec
Q 044601 71 -G--CLVFYGVDAMQ-MSQHFFLRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHK 146 (213)
Q Consensus 71 -g--~~V~~gVDAt~-L~~~~~l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~ 146 (213)
| -..+...|+.+ |... +....+|.|+.+||..-.+.+.. ..+.+...|+..+..+|+ ++|.+.+...
T Consensus 104 ~~~~nv~~~~~D~~~~l~~~--~~~~~~d~v~~~~p~p~~k~~~~------~~r~~~~~~l~~~~~~Lk-pgG~l~~~td 174 (246)
T 2vdv_E 104 HGFQNINVLRGNAMKFLPNF--FEKGQLSKMFFCFPDPHFKQRKH------KARIITNTLLSEYAYVLK-EGGVVYTITD 174 (246)
T ss_dssp STTTTEEEEECCTTSCGGGT--SCTTCEEEEEEESCCCC------------CSSCCCHHHHHHHHHHEE-EEEEEEEEES
T ss_pred cCCCcEEEEeccHHHHHHHh--ccccccCEEEEECCCcccccchh------HHhhccHHHHHHHHHHcC-CCCEEEEEec
Confidence 2 23345668876 4433 23578999999999876543221 111223578888999998 9999988543
Q ss_pred cCCCCCcccHHhHHHHhC
Q 044601 147 EGDPYNKWELVKKAEKIG 164 (213)
Q Consensus 147 ~~~py~~W~i~~lA~~~g 164 (213)
...|..|-...+.....
T Consensus 175 -~~~~~~~~~~~~~~~~~ 191 (246)
T 2vdv_E 175 -VKDLHEWMVKHLEEHPL 191 (246)
T ss_dssp -CHHHHHHHHHHHHHSTT
T ss_pred -cHHHHHHHHHHHHhCcC
Confidence 33456676665554443
No 18
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=97.31 E-value=0.0018 Score=54.68 Aligned_cols=140 Identities=16% Similarity=0.067 Sum_probs=89.2
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCC
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTH 92 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~ 92 (213)
.+..+||=||=|.=.++.+|++.++ ..+++|+-.+ . ...+ -+..|++.+.-..+. +..-|+... +...
T Consensus 108 ~~~~~vLDlG~GsG~~~~~la~~~~-~~~v~~vD~s-~-~~l~---~a~~n~~~~~~~~v~-~~~~d~~~~-----~~~~ 175 (276)
T 2b3t_A 108 EQPCRILDLGTGTGAIALALASERP-DCEIIAVDRM-P-DAVS---LAQRNAQHLAIKNIH-ILQSDWFSA-----LAGQ 175 (276)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHHCT-TSEEEEECSS-H-HHHH---HHHHHHHHHTCCSEE-EECCSTTGG-----GTTC
T ss_pred cCCCEEEEecCCccHHHHHHHHhCC-CCEEEEEECC-H-HHHH---HHHHHHHHcCCCceE-EEEcchhhh-----cccC
Confidence 4578999999998889999998874 5677776544 2 2222 255666655322333 334466542 2246
Q ss_pred cccEEEEcCCcCCCcccccchHHHHhh------------HHHHHHHHHHHHhhcccCCCeEEEEeccCCCCCcccHHhHH
Q 044601 93 KFDRVIYNFPHVGFIFRENSYCQIQLN------------KELVKGFLRNAKLLLKEENGEIHVTHKEGDPYNKWELVKKA 160 (213)
Q Consensus 93 ~FDrIiFNFPH~G~~~~e~~~~~i~~n------------~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py~~W~i~~lA 160 (213)
.||.|+.|.|..+... ......+..+ -..+..++..+..+|+ ++|.+.+... +...-.+..+.
T Consensus 176 ~fD~Iv~npPy~~~~~-~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~Lk-pgG~l~~~~~---~~~~~~~~~~l 250 (276)
T 2b3t_A 176 QFAMIVSNPPYIDEQD-PHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALV-SGGFLLLEHG---WQQGEAVRQAF 250 (276)
T ss_dssp CEEEEEECCCCBCTTC-HHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEE-EEEEEEEECC---SSCHHHHHHHH
T ss_pred CccEEEECCCCCCccc-cccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcC-CCCEEEEEEC---chHHHHHHHHH
Confidence 7999999999887521 0000001111 1456789999999998 9999988753 23445677777
Q ss_pred HHhCcEEEE
Q 044601 161 EKIGLTLQE 169 (213)
Q Consensus 161 ~~~gl~l~~ 169 (213)
+++|+...+
T Consensus 251 ~~~Gf~~v~ 259 (276)
T 2b3t_A 251 ILAGYHDVE 259 (276)
T ss_dssp HHTTCTTCC
T ss_pred HHCCCcEEE
Confidence 888876443
No 19
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=97.30 E-value=0.0075 Score=51.25 Aligned_cols=138 Identities=12% Similarity=0.030 Sum_probs=89.3
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCC---EEEEeeeccccCCCccc
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGC---LVFYGVDAMQMSQHFFL 89 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~---~V~~gVDAt~L~~~~~l 89 (213)
.++.+||=||=|.=.++..|++.++ ..+++.-++ .+.+.. +..++. ..|. .-+..-|+..+
T Consensus 71 ~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s-~~~~~~----a~~~~~---~~~~~~~v~~~~~d~~~~------ 134 (302)
T 3hem_A 71 EPGMTLLDIGCGWGSTMRHAVAEYD--VNVIGLTLS-ENQYAH----DKAMFD---EVDSPRRKEVRIQGWEEF------ 134 (302)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEECC-HHHHHH----HHHHHH---HSCCSSCEEEEECCGGGC------
T ss_pred CCcCEEEEeeccCcHHHHHHHHhCC--CEEEEEECC-HHHHHH----HHHHHH---hcCCCCceEEEECCHHHc------
Confidence 5678999999999999999999985 577776664 322221 443433 3342 22445577665
Q ss_pred cCCcccEEEEcCC--cCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCC-----------------
Q 044601 90 RTHKFDRVIYNFP--HVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDP----------------- 150 (213)
Q Consensus 90 ~~~~FDrIiFNFP--H~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~p----------------- 150 (213)
...||.|+.+.. |+... ++ .....-+..+|+.+..+|+ |+|.+.|.-.....
T Consensus 135 -~~~fD~v~~~~~~~~~~d~--~~-----~~~~~~~~~~l~~~~~~Lk-pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~ 205 (302)
T 3hem_A 135 -DEPVDRIVSLGAFEHFADG--AG-----DAGFERYDTFFKKFYNLTP-DDGRMLLHTITIPDKEEAQELGLTSPMSLLR 205 (302)
T ss_dssp -CCCCSEEEEESCGGGTTCC--SS-----CCCTTHHHHHHHHHHHSSC-TTCEEEEEEEECCCHHHHHHHTCCCCHHHHH
T ss_pred -CCCccEEEEcchHHhcCcc--cc-----ccchhHHHHHHHHHHHhcC-CCcEEEEEEEeccCccchhhccccccccccc
Confidence 477999999754 44211 00 0011335578999999998 99998887543211
Q ss_pred ---------------CCcccHHhHHHHhCcEEEEEeecCC
Q 044601 151 ---------------YNKWELVKKAEKIGLTLQEVVPFCK 175 (213)
Q Consensus 151 ---------------y~~W~i~~lA~~~gl~l~~~~~F~~ 175 (213)
.+.=.+..+.+++||.+.+...+..
T Consensus 206 ~~~~~~~~~~p~~~~~s~~~~~~~l~~aGf~~~~~~~~~~ 245 (302)
T 3hem_A 206 FIKFILTEIFPGGRLPRISQVDYYSSNAGWKVERYHRIGA 245 (302)
T ss_dssp HHHHHHHHTCTTCCCCCHHHHHHHHHHHTCEEEEEEECGG
T ss_pred hHHHHHHhcCCCCCCCCHHHHHHHHHhCCcEEEEEEeCch
Confidence 0111466788899999999887654
No 20
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=97.29 E-value=0.00089 Score=57.03 Aligned_cols=150 Identities=15% Similarity=0.121 Sum_probs=90.7
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCC
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTH 92 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~ 92 (213)
.++++||=+|=|.=.++..|++.......|+|.-.+. +.+ + .+..|++.+.-.++. +..-|++++.........
T Consensus 82 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~-~~l-~---~~~~~~~~~g~~~v~-~~~~D~~~~~~~~~~~~~ 155 (274)
T 3ajd_A 82 REDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISK-TRT-K---ALKSNINRMGVLNTI-IINADMRKYKDYLLKNEI 155 (274)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCH-HHH-H---HHHHHHHHTTCCSEE-EEESCHHHHHHHHHHTTC
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCH-HHH-H---HHHHHHHHhCCCcEE-EEeCChHhcchhhhhccc
Confidence 4678999998887788888888765446787766552 222 2 245555543222333 445588776432111146
Q ss_pred cccEEEEcCCcCCCcccc----cchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCCC-CcccHHh-HHHHhCcE
Q 044601 93 KFDRVIYNFPHVGFIFRE----NSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDPY-NKWELVK-KAEKIGLT 166 (213)
Q Consensus 93 ~FDrIiFNFPH~G~~~~e----~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py-~~W~i~~-lA~~~gl~ 166 (213)
.||+|+.|-|..|.+... .....+.....+...++..|..+|+ ++|.+.++.|+-.|. +...|.. +.+..++.
T Consensus 156 ~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~lv~stcs~~~~ene~~v~~~l~~~~~~~ 234 (274)
T 3ajd_A 156 FFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLK-KDGELVYSTCSMEVEENEEVIKYILQKRNDVE 234 (274)
T ss_dssp CEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEE-EEEEEEEEESCCCTTSSHHHHHHHHHHCSSEE
T ss_pred cCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCC-CCCEEEEEECCCChHHhHHHHHHHHHhCCCcE
Confidence 799999999998853210 0111222233456788999999998 999999988876554 3445555 34555776
Q ss_pred EEE
Q 044601 167 LQE 169 (213)
Q Consensus 167 l~~ 169 (213)
+..
T Consensus 235 ~~~ 237 (274)
T 3ajd_A 235 LII 237 (274)
T ss_dssp EEC
T ss_pred Eec
Confidence 653
No 21
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=97.25 E-value=0.0074 Score=49.43 Aligned_cols=136 Identities=16% Similarity=0.082 Sum_probs=85.7
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccC
Q 044601 12 YSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRT 91 (213)
Q Consensus 12 y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~ 91 (213)
..++.+||=+|=|.=.++..|++..+ ...|+|.-... +.+ + .+..|.+.. .++. ...-|+........+.
T Consensus 72 ~~~~~~VLDlGcG~G~~~~~la~~~~-~~~v~gvD~s~-~~~-~---~a~~~~~~~--~~v~-~~~~d~~~~~~~~~~~- 141 (230)
T 1fbn_A 72 IKRDSKILYLGASAGTTPSHVADIAD-KGIVYAIEYAP-RIM-R---ELLDACAER--ENII-PILGDANKPQEYANIV- 141 (230)
T ss_dssp CCTTCEEEEESCCSSHHHHHHHHHTT-TSEEEEEESCH-HHH-H---HHHHHTTTC--TTEE-EEECCTTCGGGGTTTS-
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHcC-CcEEEEEECCH-HHH-H---HHHHHhhcC--CCeE-EEECCCCCcccccccC-
Confidence 34678999999999889999999876 55777765552 222 2 133333222 2333 3345777633222233
Q ss_pred CcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccC-CCCC-------cccHHhHHHHh
Q 044601 92 HKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEG-DPYN-------KWELVKKAEKI 163 (213)
Q Consensus 92 ~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~-~py~-------~W~i~~lA~~~ 163 (213)
..||.|+.++|..+ ....++..+..+|+ |+|.+.|+++.. .+.. .-.+. +.+++
T Consensus 142 ~~~D~v~~~~~~~~----------------~~~~~l~~~~~~Lk-pgG~l~i~~~~~~~~~~~~~~~~~~~~l~-~l~~~ 203 (230)
T 1fbn_A 142 EKVDVIYEDVAQPN----------------QAEILIKNAKWFLK-KGGYGMIAIKARSIDVTKDPKEIFKEQKE-ILEAG 203 (230)
T ss_dssp CCEEEEEECCCSTT----------------HHHHHHHHHHHHEE-EEEEEEEEEEGGGTCSSSCHHHHHHHHHH-HHHHH
T ss_pred ccEEEEEEecCChh----------------HHHHHHHHHHHhCC-CCcEEEEEEecCCCCCCCCHHHhhHHHHH-HHHHC
Confidence 67999996554432 23467888999998 999999985432 1111 12344 55678
Q ss_pred CcEEEEEeecCC
Q 044601 164 GLTLQEVVPFCK 175 (213)
Q Consensus 164 gl~l~~~~~F~~ 175 (213)
||.+.+..++++
T Consensus 204 Gf~~~~~~~~~~ 215 (230)
T 1fbn_A 204 GFKIVDEVDIEP 215 (230)
T ss_dssp TEEEEEEEECTT
T ss_pred CCEEEEEEccCC
Confidence 999998887654
No 22
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=97.20 E-value=0.0051 Score=56.29 Aligned_cols=149 Identities=13% Similarity=0.006 Sum_probs=95.1
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccC
Q 044601 12 YSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRT 91 (213)
Q Consensus 12 y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~ 91 (213)
-.++.+||=+|=|.=.++..|++..+....|+|.-.+. ...+ .+..|++.+.-.++ .+...|++++...+ ..
T Consensus 257 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~--~~l~---~~~~~~~~~g~~~v-~~~~~D~~~~~~~~--~~ 328 (450)
T 2yxl_A 257 PKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDK--MRMK---RLKDFVKRMGIKIV-KPLVKDARKAPEII--GE 328 (450)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCH--HHHH---HHHHHHHHTTCCSE-EEECSCTTCCSSSS--CS
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCH--HHHH---HHHHHHHHcCCCcE-EEEEcChhhcchhh--cc
Confidence 35678999998888888888998875436787765542 2222 24555554322223 34566888775432 34
Q ss_pred CcccEEEEcCCcCCCccc---cc-----chHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCCCCcc-cHHh-HHH
Q 044601 92 HKFDRVIYNFPHVGFIFR---EN-----SYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDPYNKW-ELVK-KAE 161 (213)
Q Consensus 92 ~~FDrIiFNFPH~G~~~~---e~-----~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py~~W-~i~~-lA~ 161 (213)
..||+|+.|-|+.|.+.. .+ ....+.....+-..++..+..+|+ ++|.+.++-|+-.|...- .|.. +.+
T Consensus 329 ~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~Lk-pGG~lvy~tcs~~~~ene~~v~~~l~~ 407 (450)
T 2yxl_A 329 EVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVK-PGGRLLYTTCSIFKEENEKNIRWFLNV 407 (450)
T ss_dssp SCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEE-EEEEEEEEESCCCGGGTHHHHHHHHHH
T ss_pred CCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEeCCCChhhHHHHHHHHHHh
Confidence 679999999999886421 00 012233344455788999999998 999998887776655444 4444 444
Q ss_pred HhCcEEEE
Q 044601 162 KIGLTLQE 169 (213)
Q Consensus 162 ~~gl~l~~ 169 (213)
..++.+..
T Consensus 408 ~~~~~~~~ 415 (450)
T 2yxl_A 408 HPEFKLVP 415 (450)
T ss_dssp CSSCEECC
T ss_pred CCCCEEee
Confidence 45777654
No 23
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=97.19 E-value=0.01 Score=49.66 Aligned_cols=131 Identities=18% Similarity=0.147 Sum_probs=84.5
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCC---EEEEeeeccccCCCccc
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGC---LVFYGVDAMQMSQHFFL 89 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~---~V~~gVDAt~L~~~~~l 89 (213)
.++.+||=||=|.=.++..|++.++ ..+++.-.+ .+.+ + .+..+ +++.|. .-+...|+..+.
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvd~s-~~~~-~---~a~~~---~~~~~~~~~~~~~~~d~~~~~----- 127 (287)
T 1kpg_A 63 QPGMTLLDVGCGWGATMMRAVEKYD--VNVVGLTLS-KNQA-N---HVQQL---VANSENLRSKRVLLAGWEQFD----- 127 (287)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEESC-HHHH-H---HHHHH---HHTCCCCSCEEEEESCGGGCC-----
T ss_pred CCcCEEEEECCcccHHHHHHHHHcC--CEEEEEECC-HHHH-H---HHHHH---HHhcCCCCCeEEEECChhhCC-----
Confidence 4678999999999999999998875 477776554 2222 2 13322 233331 223345765542
Q ss_pred cCCcccEEEEcC--CcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCC----------C-------
Q 044601 90 RTHKFDRVIYNF--PHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGD----------P------- 150 (213)
Q Consensus 90 ~~~~FDrIiFNF--PH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~----------p------- 150 (213)
..||.|+.+. -|++.. -...+|+.+..+|+ |+|.+.|+..... |
T Consensus 128 --~~fD~v~~~~~l~~~~~~--------------~~~~~l~~~~~~Lk-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (287)
T 1kpg_A 128 --EPVDRIVSIGAFEHFGHE--------------RYDAFFSLAHRLLP-ADGVMLLHTITGLHPKEIHERGLPMSFTFAR 190 (287)
T ss_dssp --CCCSEEEEESCGGGTCTT--------------THHHHHHHHHHHSC-TTCEEEEEEEEECCHHHHTTTTCSCHHHHHH
T ss_pred --CCeeEEEEeCchhhcChH--------------HHHHHHHHHHHhcC-CCCEEEEEEecCCCccccccccccccccccc
Confidence 6799999884 455421 12478888999998 9999888653211 0
Q ss_pred ---------------CCcccHHhHHHHhCcEEEEEeecCC
Q 044601 151 ---------------YNKWELVKKAEKIGLTLQEVVPFCK 175 (213)
Q Consensus 151 ---------------y~~W~i~~lA~~~gl~l~~~~~F~~ 175 (213)
++.-.+..+.+++||.+.+...+..
T Consensus 191 ~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~~~~~~ 230 (287)
T 1kpg_A 191 FLKFIVTEIFPGGRLPSIPMVQECASANGFTVTRVQSLQP 230 (287)
T ss_dssp HHHHHHHHTSTTCCCCCHHHHHHHHHTTTCEEEEEEECHH
T ss_pred hhhhHHheeCCCCCCCCHHHHHHHHHhCCcEEEEEEeCcH
Confidence 1223556678889999998876643
No 24
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=97.19 E-value=0.004 Score=52.91 Aligned_cols=139 Identities=15% Similarity=0.136 Sum_probs=95.3
Q ss_pred CCCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCcccc
Q 044601 11 HYSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLR 90 (213)
Q Consensus 11 ~y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~ 90 (213)
+.+++++||=+|=|.=.|+..||+..|+.-.|+|--+. +++.+ .+.+ ..++.+..+..-.|+........ .
T Consensus 74 ~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s--~~~~~---~l~~---~a~~~~ni~~V~~d~~~p~~~~~-~ 144 (233)
T 4df3_A 74 PVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFA--PRVMR---DLLT---VVRDRRNIFPILGDARFPEKYRH-L 144 (233)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECC--HHHHH---HHHH---HSTTCTTEEEEESCTTCGGGGTT-T
T ss_pred CCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCC--HHHHH---HHHH---hhHhhcCeeEEEEeccCcccccc-c
Confidence 45778999999999999999999999877788885444 33322 1222 22344444444457777655433 3
Q ss_pred CCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCC------CC-CcccHHhHHHHh
Q 044601 91 THKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGD------PY-NKWELVKKAEKI 163 (213)
Q Consensus 91 ~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~------py-~~W~i~~lA~~~ 163 (213)
...+|.|+-++||... ...++.++..+|+ |+|.+.|.++... |- ...+..+.-+++
T Consensus 145 ~~~vDvVf~d~~~~~~----------------~~~~l~~~~r~LK-pGG~lvI~ik~r~~d~~~p~~~~~~~ev~~L~~~ 207 (233)
T 4df3_A 145 VEGVDGLYADVAQPEQ----------------AAIVVRNARFFLR-DGGYMLMAIKARSIDVTTEPSEVYKREIKTLMDG 207 (233)
T ss_dssp CCCEEEEEECCCCTTH----------------HHHHHHHHHHHEE-EEEEEEEEEECCHHHHHTCCCHHHHHHHHHHHHT
T ss_pred cceEEEEEEeccCChh----------------HHHHHHHHHHhcc-CCCEEEEEEecccCCCCCChHHHHHHHHHHHHHC
Confidence 4679999999988762 1257889999998 9999999876432 11 112334445678
Q ss_pred CcEEEEEeecCC
Q 044601 164 GLTLQEVVPFCK 175 (213)
Q Consensus 164 gl~l~~~~~F~~ 175 (213)
||.+.+...+++
T Consensus 208 GF~l~e~i~L~p 219 (233)
T 4df3_A 208 GLEIKDVVHLDP 219 (233)
T ss_dssp TCCEEEEEECTT
T ss_pred CCEEEEEEccCC
Confidence 999999988765
No 25
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=97.16 E-value=0.0076 Score=48.84 Aligned_cols=133 Identities=17% Similarity=0.175 Sum_probs=87.3
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccC
Q 044601 12 YSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRT 91 (213)
Q Consensus 12 y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~ 91 (213)
..++.+||=||=|.=.++..|++. +..+++.-.+ . .+.+. +..+. ...++ -....|+.++. +..
T Consensus 51 ~~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s-~-~~~~~---a~~~~---~~~~~-~~~~~d~~~~~----~~~ 114 (242)
T 3l8d_A 51 VKKEAEVLDVGCGDGYGTYKLSRT---GYKAVGVDIS-E-VMIQK---GKERG---EGPDL-SFIKGDLSSLP----FEN 114 (242)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESC-H-HHHHH---HHTTT---CBTTE-EEEECBTTBCS----SCT
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHc---CCeEEEEECC-H-HHHHH---HHhhc---ccCCc-eEEEcchhcCC----CCC
Confidence 346789999999999999999987 3477766544 2 22211 11111 11233 34556777653 336
Q ss_pred CcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCC-------------------CCC
Q 044601 92 HKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGD-------------------PYN 152 (213)
Q Consensus 92 ~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~-------------------py~ 152 (213)
..||.|+.+...--.. + ...+++.+..+|+ |+|.+.|+..... .++
T Consensus 115 ~~fD~v~~~~~l~~~~---~-----------~~~~l~~~~~~L~-pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (242)
T 3l8d_A 115 EQFEAIMAINSLEWTE---E-----------PLRALNEIKRVLK-SDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMM 179 (242)
T ss_dssp TCEEEEEEESCTTSSS---C-----------HHHHHHHHHHHEE-EEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCC
T ss_pred CCccEEEEcChHhhcc---C-----------HHHHHHHHHHHhC-CCeEEEEEEcCCcchhhhhhhhhhccccccccCCC
Confidence 7899999875433221 0 1267888999998 9999998863221 134
Q ss_pred cccHHhHHHHhCcEEEEEeecCC
Q 044601 153 KWELVKKAEKIGLTLQEVVPFCK 175 (213)
Q Consensus 153 ~W~i~~lA~~~gl~l~~~~~F~~ 175 (213)
.+.+..+.+++||.+++...+..
T Consensus 180 ~~~~~~~l~~~Gf~~~~~~~~~~ 202 (242)
T 3l8d_A 180 PWEFEQLVKEQGFKVVDGIGVYK 202 (242)
T ss_dssp HHHHHHHHHHTTEEEEEEEEEEC
T ss_pred HHHHHHHHHHcCCEEEEeecccc
Confidence 46788999999999999887643
No 26
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=97.15 E-value=0.0022 Score=54.79 Aligned_cols=126 Identities=13% Similarity=0.131 Sum_probs=82.1
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCC
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTH 92 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~ 92 (213)
.++.+||=+|=|.=.||..+|+... ..++|. |-..+..+ .+..|++...-.+..-...-|+.++.. ..
T Consensus 124 ~~~~~VLDlgcG~G~~~~~la~~~~--~~V~~v--D~s~~~~~---~a~~n~~~n~~~~~v~~~~~D~~~~~~-----~~ 191 (278)
T 2frn_A 124 KPDELVVDMFAGIGHLSLPIAVYGK--AKVIAI--EKDPYTFK---FLVENIHLNKVEDRMSAYNMDNRDFPG-----EN 191 (278)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTC--CEEEEE--CCCHHHHH---HHHHHHHHTTCTTTEEEECSCTTTCCC-----CS
T ss_pred CCCCEEEEecccCCHHHHHHHHhCC--CEEEEE--ECCHHHHH---HHHHHHHHcCCCceEEEEECCHHHhcc-----cC
Confidence 4578999988887788888887742 255554 53233333 255565432211223366778887653 57
Q ss_pred cccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCC--C--CCcccHHhHHHHhCcEEE
Q 044601 93 KFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGD--P--YNKWELVKKAEKIGLTLQ 168 (213)
Q Consensus 93 ~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~--p--y~~W~i~~lA~~~gl~l~ 168 (213)
.||.|+.|.|... ..|+..+..+|+ |+|.+++..+... . ...-.+...+++.|+.+.
T Consensus 192 ~fD~Vi~~~p~~~------------------~~~l~~~~~~Lk-pgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~ 252 (278)
T 2frn_A 192 IADRILMGYVVRT------------------HEFIPKALSIAK-DGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVE 252 (278)
T ss_dssp CEEEEEECCCSSG------------------GGGHHHHHHHEE-EEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEE
T ss_pred CccEEEECCchhH------------------HHHHHHHHHHCC-CCeEEEEEEeeccccccccHHHHHHHHHHHcCCeeE
Confidence 8999999998322 256778889998 9999998776521 1 122345678888999886
Q ss_pred E
Q 044601 169 E 169 (213)
Q Consensus 169 ~ 169 (213)
.
T Consensus 253 ~ 253 (278)
T 2frn_A 253 K 253 (278)
T ss_dssp E
T ss_pred E
Confidence 6
No 27
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=97.14 E-value=0.0074 Score=49.37 Aligned_cols=134 Identities=17% Similarity=0.162 Sum_probs=89.7
Q ss_pred cccCCCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCc
Q 044601 8 WSNHYSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHF 87 (213)
Q Consensus 8 ~~~~y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~ 87 (213)
++....+..+||=||=|.=.++..|++. +.++++.-.+ .+.+ +..++. +. ....|+.++..
T Consensus 35 ~l~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s-~~~~-----------~~a~~~-~~-~~~~d~~~~~~-- 95 (240)
T 3dli_A 35 YIPYFKGCRRVLDIGCGRGEFLELCKEE---GIESIGVDIN-EDMI-----------KFCEGK-FN-VVKSDAIEYLK-- 95 (240)
T ss_dssp GGGGTTTCSCEEEETCTTTHHHHHHHHH---TCCEEEECSC-HHHH-----------HHHHTT-SE-EECSCHHHHHH--
T ss_pred HHhhhcCCCeEEEEeCCCCHHHHHHHhC---CCcEEEEECC-HHHH-----------HHHHhh-cc-eeeccHHHHhh--
Confidence 4555677899999999998999999886 3466655443 2221 222222 33 34566665421
Q ss_pred cccCCcccEEEEcCC--cCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCC----------------
Q 044601 88 FLRTHKFDRVIYNFP--HVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGD---------------- 149 (213)
Q Consensus 88 ~l~~~~FDrIiFNFP--H~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~---------------- 149 (213)
++....||.|+.+.- |+. ..-+..+++.+..+|+ |+|.+.|+.....
T Consensus 96 ~~~~~~fD~i~~~~~l~~~~--------------~~~~~~~l~~~~~~Lk-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~ 160 (240)
T 3dli_A 96 SLPDKYLDGVMISHFVEHLD--------------PERLFELLSLCYSKMK-YSSYIVIESPNPTSLYSLINFYIDPTHKK 160 (240)
T ss_dssp TSCTTCBSEEEEESCGGGSC--------------GGGHHHHHHHHHHHBC-TTCCEEEEEECTTSHHHHHHHTTSTTCCS
T ss_pred hcCCCCeeEEEECCchhhCC--------------cHHHHHHHHHHHHHcC-CCcEEEEEeCCcchhHHHHHHhcCccccc
Confidence 234678999998643 222 1124578899999998 9999988875432
Q ss_pred CCCcccHHhHHHHhCcEEEEEeecCC
Q 044601 150 PYNKWELVKKAEKIGLTLQEVVPFCK 175 (213)
Q Consensus 150 py~~W~i~~lA~~~gl~l~~~~~F~~ 175 (213)
+++...+..+.+++||..++...+.+
T Consensus 161 ~~~~~~l~~~l~~aGf~~~~~~~~~~ 186 (240)
T 3dli_A 161 PVHPETLKFILEYLGFRDVKIEFFEE 186 (240)
T ss_dssp CCCHHHHHHHHHHHTCEEEEEEEECC
T ss_pred cCCHHHHHHHHHHCCCeEEEEEEecc
Confidence 23445677889999999999988864
No 28
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=97.14 E-value=0.0045 Score=56.14 Aligned_cols=143 Identities=17% Similarity=0.105 Sum_probs=90.7
Q ss_pred ccccCCCC-CCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCC
Q 044601 7 KWSNHYSS-KQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQ 85 (213)
Q Consensus 7 k~~~~y~~-~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~ 85 (213)
+++..+.+ +.+||=+|=|.=.||+.+|+. + ..| |+.|..+...+ .+..|++... ...++. .-|+.++-.
T Consensus 206 ~~l~~~~~~g~~VLDlg~GtG~~sl~~a~~-g--a~V--~avDis~~al~---~a~~n~~~ng-~~~~~~-~~D~~~~l~ 275 (393)
T 4dmg_A 206 RLFEAMVRPGERVLDVYSYVGGFALRAARK-G--AYA--LAVDKDLEALG---VLDQAALRLG-LRVDIR-HGEALPTLR 275 (393)
T ss_dssp HHHHTTCCTTCEEEEESCTTTHHHHHHHHT-T--CEE--EEEESCHHHHH---HHHHHHHHHT-CCCEEE-ESCHHHHHH
T ss_pred HHHHHHhcCCCeEEEcccchhHHHHHHHHc-C--CeE--EEEECCHHHHH---HHHHHHHHhC-CCCcEE-EccHHHHHH
Confidence 45666666 899999998888888888875 3 344 45563333333 2566665432 223444 567766432
Q ss_pred CccccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCCCC-cc--cHHhHHHH
Q 044601 86 HFFLRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDPYN-KW--ELVKKAEK 162 (213)
Q Consensus 86 ~~~l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py~-~W--~i~~lA~~ 162 (213)
.. ... ||.||.|-|..... . +.+..-......++..|..+|+ |+|.+++..+...+.. .| .|...+.+
T Consensus 276 ~~--~~~-fD~Ii~dpP~f~~~-~----~~~~~~~~~~~~ll~~a~~~Lk-pGG~Lv~~s~s~~~~~~~f~~~v~~a~~~ 346 (393)
T 4dmg_A 276 GL--EGP-FHHVLLDPPTLVKR-P----EELPAMKRHLVDLVREALRLLA-EEGFLWLSSCSYHLRLEDLLEVARRAAAD 346 (393)
T ss_dssp TC--CCC-EEEEEECCCCCCSS-G----GGHHHHHHHHHHHHHHHHHTEE-EEEEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred Hh--cCC-CCEEEECCCcCCCC-H----HHHHHHHHHHHHHHHHHHHhcC-CCCEEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 22 234 99999999976542 1 2344455667788999999998 9999998887765432 22 34456666
Q ss_pred hCcEEE
Q 044601 163 IGLTLQ 168 (213)
Q Consensus 163 ~gl~l~ 168 (213)
.|..+.
T Consensus 347 ~g~~~~ 352 (393)
T 4dmg_A 347 LGRRLR 352 (393)
T ss_dssp HTCCEE
T ss_pred hCCeEE
Confidence 775443
No 29
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=97.12 E-value=0.0078 Score=47.61 Aligned_cols=138 Identities=14% Similarity=0.108 Sum_probs=84.8
Q ss_pred cccCCCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEE-EEeeeccccCCC
Q 044601 8 WSNHYSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLV-FYGVDAMQMSQH 86 (213)
Q Consensus 8 ~~~~y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V-~~gVDAt~L~~~ 86 (213)
++....++ +||=||=|.=.++..|++. +..+++.-.+ +++.+ .+..++.. .|..+ ....|+.++.
T Consensus 24 ~~~~~~~~-~vLdiGcG~G~~~~~l~~~---~~~v~~vD~s--~~~~~---~a~~~~~~---~~~~~~~~~~d~~~~~-- 89 (202)
T 2kw5_A 24 VANQIPQG-KILCLAEGEGRNACFLASL---GYEVTAVDQS--SVGLA---KAKQLAQE---KGVKITTVQSNLADFD-- 89 (202)
T ss_dssp HHHHSCSS-EEEECCCSCTHHHHHHHTT---TCEEEEECSS--HHHHH---HHHHHHHH---HTCCEEEECCBTTTBS--
T ss_pred HHHhCCCC-CEEEECCCCCHhHHHHHhC---CCeEEEEECC--HHHHH---HHHHHHHh---cCCceEEEEcChhhcC--
Confidence 34445566 9999999998888888875 3466665444 32322 13333332 23222 3455777653
Q ss_pred ccccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccC--------CC---CCccc
Q 044601 87 FFLRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEG--------DP---YNKWE 155 (213)
Q Consensus 87 ~~l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~--------~p---y~~W~ 155 (213)
+....||.|+.++.|... .-...++..+..+|+ ++|.+.++.... .| ...+.
T Consensus 90 --~~~~~fD~v~~~~~~~~~--------------~~~~~~l~~~~~~L~-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (202)
T 2kw5_A 90 --IVADAWEGIVSIFCHLPS--------------SLRQQLYPKVYQGLK-PGGVFILEGFAPEQLQYNTGGPKDLDLLPK 152 (202)
T ss_dssp --CCTTTCSEEEEECCCCCH--------------HHHHHHHHHHHTTCC-SSEEEEEEEECTTTGGGTSCCSSSGGGCCC
T ss_pred --CCcCCccEEEEEhhcCCH--------------HHHHHHHHHHHHhcC-CCcEEEEEEeccccccCCCCCCCcceeecC
Confidence 335789999999887631 224578888999998 999998886422 12 12333
Q ss_pred HHhHHHHh-CcEEEEEeecCCC
Q 044601 156 LVKKAEKI-GLTLQEVVPFCKQ 176 (213)
Q Consensus 156 i~~lA~~~-gl~l~~~~~F~~~ 176 (213)
..++.+.. ||.++....+...
T Consensus 153 ~~~l~~~l~Gf~v~~~~~~~~~ 174 (202)
T 2kw5_A 153 LETLQSELPSLNWLIANNLERN 174 (202)
T ss_dssp HHHHHHHCSSSCEEEEEEEEEE
T ss_pred HHHHHHHhcCceEEEEEEEEee
Confidence 33322211 8988887766544
No 30
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=97.12 E-value=0.0027 Score=48.09 Aligned_cols=117 Identities=15% Similarity=0.040 Sum_probs=78.4
Q ss_pred CCCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCC----
Q 044601 11 HYSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQH---- 86 (213)
Q Consensus 11 ~y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~---- 86 (213)
+..+..+||=||-|.=.++..|++.++....+++.-.+. +.+ . .++.+ ...|+.++...
T Consensus 19 ~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~---~~~-~------------~~~~~-~~~d~~~~~~~~~~~ 81 (180)
T 1ej0_A 19 LFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP---MDP-I------------VGVDF-LQGDFRDELVMKALL 81 (180)
T ss_dssp CCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC---CCC-C------------TTEEE-EESCTTSHHHHHHHH
T ss_pred CCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc---ccc-c------------CcEEE-EEcccccchhhhhhh
Confidence 345678999999999899999999886557888887765 111 1 23443 34577665310
Q ss_pred ccccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccC
Q 044601 87 FFLRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEG 148 (213)
Q Consensus 87 ~~l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~ 148 (213)
..+....||.|+.|.|....... .........+...++..+..+|+ ++|.+.++....
T Consensus 82 ~~~~~~~~D~i~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~L~-~gG~l~~~~~~~ 139 (180)
T 1ej0_A 82 ERVGDSKVQVVMSDMAPNMSGTP---AVDIPRAMYLVELALEMCRDVLA-PGGSFVVKVFQG 139 (180)
T ss_dssp HHHTTCCEEEEEECCCCCCCSCH---HHHHHHHHHHHHHHHHHHHHHEE-EEEEEEEEEESS
T ss_pred ccCCCCceeEEEECCCccccCCC---ccchHHHHHHHHHHHHHHHHHcC-CCcEEEEEEecC
Confidence 00235689999999884432111 11222345567899999999998 999999877654
No 31
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=97.11 E-value=0.0016 Score=55.12 Aligned_cols=130 Identities=18% Similarity=0.180 Sum_probs=85.1
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHH-HhCCCEEEEeeeccccCCCcccc
Q 044601 12 YSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVREL-EERGCLVFYGVDAMQMSQHFFLR 90 (213)
Q Consensus 12 y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L-~~~g~~V~~gVDAt~L~~~~~l~ 90 (213)
..++.+||=+|=|.=.++..|++..+++..+++.-.+ ++..+ .+.+|++.. ....+. ....|+.+ .+.
T Consensus 108 ~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s--~~~~~---~a~~~~~~~~g~~~v~-~~~~d~~~-----~~~ 176 (275)
T 1yb2_A 108 LRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERD--EDNLK---KAMDNLSEFYDIGNVR-TSRSDIAD-----FIS 176 (275)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSC--HHHHH---HHHHHHHTTSCCTTEE-EECSCTTT-----CCC
T ss_pred CCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECC--HHHHH---HHHHHHHhcCCCCcEE-EEECchhc-----cCc
Confidence 4567899999999999999999886555677766554 22222 244554432 111233 34456665 123
Q ss_pred CCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCCCCcccHHhHHHHhCcEEEEE
Q 044601 91 THKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDPYNKWELVKKAEKIGLTLQEV 170 (213)
Q Consensus 91 ~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py~~W~i~~lA~~~gl~l~~~ 170 (213)
...||.|+.+.|+.- .+++.+..+|+ ++|.+.+...... ...++....++.||...+.
T Consensus 177 ~~~fD~Vi~~~~~~~-------------------~~l~~~~~~Lk-pgG~l~i~~~~~~--~~~~~~~~l~~~Gf~~~~~ 234 (275)
T 1yb2_A 177 DQMYDAVIADIPDPW-------------------NHVQKIASMMK-PGSVATFYLPNFD--QSEKTVLSLSASGMHHLET 234 (275)
T ss_dssp SCCEEEEEECCSCGG-------------------GSHHHHHHTEE-EEEEEEEEESSHH--HHHHHHHHSGGGTEEEEEE
T ss_pred CCCccEEEEcCcCHH-------------------HHHHHHHHHcC-CCCEEEEEeCCHH--HHHHHHHHHHHCCCeEEEE
Confidence 467999999877431 57788899998 9999988774321 2345555666789988877
Q ss_pred eecC
Q 044601 171 VPFC 174 (213)
Q Consensus 171 ~~F~ 174 (213)
....
T Consensus 235 ~~~~ 238 (275)
T 1yb2_A 235 VELM 238 (275)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 6543
No 32
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=97.08 E-value=0.004 Score=52.48 Aligned_cols=130 Identities=18% Similarity=0.162 Sum_probs=83.2
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCC
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTH 92 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~ 92 (213)
.++.+||-+|=|.=.++.+|++..++...+++.-.+ ++..+ .+..|++...-.....+..-|+.+. +...
T Consensus 111 ~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s--~~~~~---~a~~~~~~~~~~~~v~~~~~d~~~~-----~~~~ 180 (277)
T 1o54_A 111 KEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKR--EEFAK---LAESNLTKWGLIERVTIKVRDISEG-----FDEK 180 (277)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCC--HHHHH---HHHHHHHHTTCGGGEEEECCCGGGC-----CSCC
T ss_pred CCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECC--HHHHH---HHHHHHHHcCCCCCEEEEECCHHHc-----ccCC
Confidence 457899999999999999999987655677665443 22222 2455554332101123445566654 2346
Q ss_pred cccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCCCCcccHHhHHHHhCcEEEEEee
Q 044601 93 KFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDPYNKWELVKKAEKIGLTLQEVVP 172 (213)
Q Consensus 93 ~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py~~W~i~~lA~~~gl~l~~~~~ 172 (213)
.||.|+.|.|..- .++..+..+|+ ++|.+.+...... ....+....++.||...+...
T Consensus 181 ~~D~V~~~~~~~~-------------------~~l~~~~~~L~-pgG~l~~~~~~~~--~~~~~~~~l~~~gf~~~~~~~ 238 (277)
T 1o54_A 181 DVDALFLDVPDPW-------------------NYIDKCWEALK-GGGRFATVCPTTN--QVQETLKKLQELPFIRIEVWE 238 (277)
T ss_dssp SEEEEEECCSCGG-------------------GTHHHHHHHEE-EEEEEEEEESSHH--HHHHHHHHHHHSSEEEEEEEC
T ss_pred ccCEEEECCcCHH-------------------HHHHHHHHHcC-CCCEEEEEeCCHH--HHHHHHHHHHHCCCceeEEEE
Confidence 7999999877431 56788889998 9999888774321 223444555668998777654
Q ss_pred cC
Q 044601 173 FC 174 (213)
Q Consensus 173 F~ 174 (213)
-.
T Consensus 239 ~~ 240 (277)
T 1o54_A 239 SL 240 (277)
T ss_dssp CC
T ss_pred Ee
Confidence 43
No 33
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=97.03 E-value=0.0026 Score=55.33 Aligned_cols=126 Identities=16% Similarity=0.165 Sum_probs=81.3
Q ss_pred CCCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCcccc
Q 044601 11 HYSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLR 90 (213)
Q Consensus 11 ~y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~ 90 (213)
...++.+||=+|=|-=.||..+|+. + +..|+|.-.+. +.+ ..+.+|++...=.+....+.-||.++. .
T Consensus 122 ~~~~g~~VlD~~aG~G~~~i~~a~~-g-~~~V~avD~np-~a~----~~~~~N~~~N~v~~~v~~~~~D~~~~~-----~ 189 (278)
T 3k6r_A 122 VAKPDELVVDMFAGIGHLSLPIAVY-G-KAKVIAIEKDP-YTF----KFLVENIHLNKVEDRMSAYNMDNRDFP-----G 189 (278)
T ss_dssp HCCTTCEEEETTCTTTTTTHHHHHH-T-CCEEEEECCCH-HHH----HHHHHHHHHTTCTTTEEEECSCTTTCC-----C
T ss_pred hcCCCCEEEEecCcCcHHHHHHHHh-c-CCeEEEEECCH-HHH----HHHHHHHHHcCCCCcEEEEeCcHHHhc-----c
Confidence 3567889988777766777777765 3 45787766653 222 235667654332333456778987753 2
Q ss_pred CCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEecc-CCCCCccc---HHhHHHHhCcE
Q 044601 91 THKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKE-GDPYNKWE---LVKKAEKIGLT 166 (213)
Q Consensus 91 ~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~-~~py~~W~---i~~lA~~~gl~ 166 (213)
...||+||.|.|+... .|+..|..+|+ ++|-||+-... ......|. ++.+++..|+.
T Consensus 190 ~~~~D~Vi~~~p~~~~------------------~~l~~a~~~lk-~gG~ih~~~~~~e~~~~~~~~e~i~~~~~~~g~~ 250 (278)
T 3k6r_A 190 ENIADRILMGYVVRTH------------------EFIPKALSIAK-DGAIIHYHNTVPEKLMPREPFETFKRITKEYGYD 250 (278)
T ss_dssp CSCEEEEEECCCSSGG------------------GGHHHHHHHEE-EEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCE
T ss_pred ccCCCEEEECCCCcHH------------------HHHHHHHHHcC-CCCEEEEEeeecccccchhHHHHHHHHHHHcCCc
Confidence 4679999999997542 46778889998 99999874321 11223343 34577788876
Q ss_pred E
Q 044601 167 L 167 (213)
Q Consensus 167 l 167 (213)
+
T Consensus 251 v 251 (278)
T 3k6r_A 251 V 251 (278)
T ss_dssp E
T ss_pred E
Confidence 5
No 34
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=97.02 E-value=0.02 Score=49.00 Aligned_cols=145 Identities=14% Similarity=0.155 Sum_probs=93.2
Q ss_pred ccCCCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCcc
Q 044601 9 SNHYSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFF 88 (213)
Q Consensus 9 ~~~y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~ 88 (213)
+....++.+||=||=|.=.++..|++.++ ..+++.-.+ . +..+ .+..++....-.+..-...-|+.++.
T Consensus 112 l~~~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s-~-~~~~---~a~~~~~~~~~~~~v~~~~~d~~~~~---- 180 (312)
T 3vc1_A 112 LGQAGPDDTLVDAGCGRGGSMVMAHRRFG--SRVEGVTLS-A-AQAD---FGNRRARELRIDDHVRSRVCNMLDTP---- 180 (312)
T ss_dssp SCCCCTTCEEEEESCTTSHHHHHHHHHHC--CEEEEEESC-H-HHHH---HHHHHHHHTTCTTTEEEEECCTTSCC----
T ss_pred hccCCCCCEEEEecCCCCHHHHHHHHHcC--CEEEEEeCC-H-HHHH---HHHHHHHHcCCCCceEEEECChhcCC----
Confidence 44456789999999999999999998873 566665544 2 2222 24444443221112334556777653
Q ss_pred ccCCcccEEEEcCC--cCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEec-cCCCC--------------
Q 044601 89 LRTHKFDRVIYNFP--HVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHK-EGDPY-------------- 151 (213)
Q Consensus 89 l~~~~FDrIiFNFP--H~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~-~~~py-------------- 151 (213)
+....||.|+.+.. |++ ...+++.+..+|+ |+|.+.|+-. ....+
T Consensus 181 ~~~~~fD~V~~~~~l~~~~-----------------~~~~l~~~~~~Lk-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (312)
T 3vc1_A 181 FDKGAVTASWNNESTMYVD-----------------LHDLFSEHSRFLK-VGGRYVTITGCWNPRYGQPSKWVSQINAHF 242 (312)
T ss_dssp CCTTCEEEEEEESCGGGSC-----------------HHHHHHHHHHHEE-EEEEEEEEEEEECTTTCSCCHHHHHHHHHH
T ss_pred CCCCCEeEEEECCchhhCC-----------------HHHHHHHHHHHcC-CCcEEEEEEccccccccchhHHHHHHHhhh
Confidence 34578999998743 221 5578999999998 9999877642 22111
Q ss_pred -----CcccHHhHHHHhCcEEEEEeecCCCCCCCCc
Q 044601 152 -----NKWELVKKAEKIGLTLQEVVPFCKQDYPGYD 182 (213)
Q Consensus 152 -----~~W~i~~lA~~~gl~l~~~~~F~~~~yPgY~ 182 (213)
+.=.+..+.+++||.+++...+.+...|.|.
T Consensus 243 ~~~~~s~~~~~~~l~~aGf~~~~~~~~~~~~~~~w~ 278 (312)
T 3vc1_A 243 ECNIHSRREYLRAMADNRLVPHTIVDLTPDTLPYWE 278 (312)
T ss_dssp TCCCCBHHHHHHHHHTTTEEEEEEEECHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHCCCEEEEEEeCCHHHHHHHH
Confidence 1223566788999999999888754444443
No 35
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=97.00 E-value=0.0052 Score=54.83 Aligned_cols=155 Identities=19% Similarity=0.120 Sum_probs=94.8
Q ss_pred cccCCCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCc
Q 044601 8 WSNHYSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHF 87 (213)
Q Consensus 8 ~~~~y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~ 87 (213)
++..+ ++.+||=+|=|.=.||..+|+. +..++|.-.+ .+ ..+ .+..|++...-.++ ..+.-|+.++-...
T Consensus 204 ~~~~~-~~~~VLDlg~G~G~~~~~la~~---~~~v~~vD~s-~~-~~~---~a~~n~~~n~~~~~-~~~~~d~~~~~~~~ 273 (382)
T 1wxx_A 204 YMERF-RGERALDVFSYAGGFALHLALG---FREVVAVDSS-AE-ALR---RAEENARLNGLGNV-RVLEANAFDLLRRL 273 (382)
T ss_dssp HGGGC-CEEEEEEETCTTTHHHHHHHHH---EEEEEEEESC-HH-HHH---HHHHHHHHTTCTTE-EEEESCHHHHHHHH
T ss_pred HHHhc-CCCeEEEeeeccCHHHHHHHHh---CCEEEEEECC-HH-HHH---HHHHHHHHcCCCCc-eEEECCHHHHHHHH
Confidence 34455 6789999999988999999877 3466665544 22 222 25566544321223 34555777653221
Q ss_pred cccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCCCC-cc-c-HHhHHHHhC
Q 044601 88 FLRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDPYN-KW-E-LVKKAEKIG 164 (213)
Q Consensus 88 ~l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py~-~W-~-i~~lA~~~g 164 (213)
.-...+||.||.|-|..+... + .+.........++..+..+|+ |+|.+.++.+...+-. .| + +...+.+.|
T Consensus 274 ~~~~~~fD~Ii~dpP~~~~~~-~----~~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g 347 (382)
T 1wxx_A 274 EKEGERFDLVVLDPPAFAKGK-K----DVERAYRAYKEVNLRAIKLLK-EGGILATASCSHHMTEPLFYAMVAEAAQDAH 347 (382)
T ss_dssp HHTTCCEEEEEECCCCSCCST-T----SHHHHHHHHHHHHHHHHHTEE-EEEEEEEEECCTTSCHHHHHHHHHHHHHHTT
T ss_pred HhcCCCeeEEEECCCCCCCCh-h----HHHHHHHHHHHHHHHHHHhcC-CCCEEEEEECCCCCCHHHHHHHHHHHHHHcC
Confidence 112468999999999877421 1 234455667789999999998 9999999887654322 12 2 233566676
Q ss_pred c--EEEEEeecCCCCCC
Q 044601 165 L--TLQEVVPFCKQDYP 179 (213)
Q Consensus 165 l--~l~~~~~F~~~~yP 179 (213)
. .+.+. .-.+.++|
T Consensus 348 ~~~~~i~~-~~~~~d~p 363 (382)
T 1wxx_A 348 RLLRVVEK-RGQPFDHP 363 (382)
T ss_dssp CCEEEEEE-ECCCTTSC
T ss_pred CeEEEEEc-CCCCCCCC
Confidence 4 44433 23344454
No 36
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=96.98 E-value=0.0076 Score=55.89 Aligned_cols=148 Identities=16% Similarity=0.137 Sum_probs=101.3
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCC
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTH 92 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~ 92 (213)
.++.+||=+|=|-=..|..||+..+....|+|.-.+ .+.+ + .+.+|++.+.-.+ ..+..-|+.++.... ..
T Consensus 104 ~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis-~~rl-~---~~~~n~~r~g~~n-v~v~~~Da~~l~~~~---~~ 174 (456)
T 3m4x_A 104 KPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIF-PKRA-K---ILSENIERWGVSN-AIVTNHAPAELVPHF---SG 174 (456)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSS-HHHH-H---HHHHHHHHHTCSS-EEEECCCHHHHHHHH---TT
T ss_pred CCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCC-HHHH-H---HHHHHHHHcCCCc-eEEEeCCHHHhhhhc---cc
Confidence 457899999888888889999887655678876554 2222 2 2566776653322 345567888775432 46
Q ss_pred cccEEEEcCCcCCCcccc-c-------chHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCCC-CcccHHhHHHHh
Q 044601 93 KFDRVIYNFPHVGFIFRE-N-------SYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDPY-NKWELVKKAEKI 163 (213)
Q Consensus 93 ~FDrIiFNFPH~G~~~~e-~-------~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py-~~W~i~~lA~~~ 163 (213)
.||+|+.|=|+.|.+... + ....+.....+...++.+|..+|+ ++|.+..+-|+-.|- +.-+|..+.++.
T Consensus 175 ~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~Lk-pGG~LvYsTCs~~~eEne~vv~~~l~~~ 253 (456)
T 3m4x_A 175 FFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLK-NKGQLIYSTCTFAPEENEEIISWLVENY 253 (456)
T ss_dssp CEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEE-EEEEEEEEESCCCGGGTHHHHHHHHHHS
T ss_pred cCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEEeecccccCHHHHHHHHHhC
Confidence 899999999998854211 0 112344455667799999999998 999998887776554 556677777777
Q ss_pred CcEEEEE
Q 044601 164 GLTLQEV 170 (213)
Q Consensus 164 gl~l~~~ 170 (213)
++.+...
T Consensus 254 ~~~l~~~ 260 (456)
T 3m4x_A 254 PVTIEEI 260 (456)
T ss_dssp SEEEECC
T ss_pred CCEEEec
Confidence 8666544
No 37
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=96.97 E-value=0.029 Score=46.39 Aligned_cols=141 Identities=20% Similarity=0.166 Sum_probs=90.0
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCC---EEEEeeeccccCCCccc
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGC---LVFYGVDAMQMSQHFFL 89 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~---~V~~gVDAt~L~~~~~l 89 (213)
.+..+||=||=|.=.++..|++.+ +..+++.-.+ .+.+ + .+..++. ..|. .-....|+.++. +
T Consensus 60 ~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s-~~~~-~---~a~~~~~---~~~~~~~~~~~~~d~~~~~----~ 125 (273)
T 3bus_A 60 RSGDRVLDVGCGIGKPAVRLATAR--DVRVTGISIS-RPQV-N---QANARAT---AAGLANRVTFSYADAMDLP----F 125 (273)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHS--CCEEEEEESC-HHHH-H---HHHHHHH---HTTCTTTEEEEECCTTSCC----S
T ss_pred CCCCEEEEeCCCCCHHHHHHHHhc--CCEEEEEeCC-HHHH-H---HHHHHHH---hcCCCcceEEEECccccCC----C
Confidence 467899999999999999999876 4577777655 2222 2 1333332 2331 234455777653 3
Q ss_pred cCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccC-CC------------------
Q 044601 90 RTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEG-DP------------------ 150 (213)
Q Consensus 90 ~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~-~p------------------ 150 (213)
....||.|+.+....-... ...+++.+..+|+ |+|.+.|+-... .+
T Consensus 126 ~~~~fD~v~~~~~l~~~~~--------------~~~~l~~~~~~L~-pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (273)
T 3bus_A 126 EDASFDAVWALESLHHMPD--------------RGRALREMARVLR-PGGTVAIADFVLLAPVEGAKKEAVDAFRAGGGV 190 (273)
T ss_dssp CTTCEEEEEEESCTTTSSC--------------HHHHHHHHHTTEE-EEEEEEEEEEEESSCCCHHHHHHHHHHHHHHTC
T ss_pred CCCCccEEEEechhhhCCC--------------HHHHHHHHHHHcC-CCeEEEEEEeeccCCCChhHHHHHHHHHhhcCc
Confidence 3578999998754322210 1478888999998 999988765321 11
Q ss_pred ---CCcccHHhHHHHhCcEEEEEeecCCCCCCCCc
Q 044601 151 ---YNKWELVKKAEKIGLTLQEVVPFCKQDYPGYD 182 (213)
Q Consensus 151 ---y~~W~i~~lA~~~gl~l~~~~~F~~~~yPgY~ 182 (213)
++.-.+..+.+++||.+++...+.....+.|.
T Consensus 191 ~~~~~~~~~~~~l~~aGf~~~~~~~~~~~~~~~~~ 225 (273)
T 3bus_A 191 LSLGGIDEYESDVRQAELVVTSTVDISAQARPSLV 225 (273)
T ss_dssp CCCCCHHHHHHHHHHTTCEEEEEEECHHHHTTHHH
T ss_pred cCCCCHHHHHHHHHHcCCeEEEEEECcHhHHHHHH
Confidence 12234566788999999998887654344443
No 38
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=96.95 E-value=0.0013 Score=55.13 Aligned_cols=138 Identities=13% Similarity=0.189 Sum_probs=86.7
Q ss_pred CCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHh---CC--CEEEEeeeccc-cCCCcc
Q 044601 15 KQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEE---RG--CLVFYGVDAMQ-MSQHFF 88 (213)
Q Consensus 15 ~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~---~g--~~V~~gVDAt~-L~~~~~ 88 (213)
..+||=||=|.=.|+..||+.+. ..++++.-.. +.+.+ -+..+++.|+. .+ -.-+...||.+ |...
T Consensus 47 ~~~vLDiGcG~G~~~~~la~~~p-~~~v~GiDis--~~~l~---~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~-- 118 (235)
T 3ckk_A 47 QVEFADIGCGYGGLLVELSPLFP-DTLILGLEIR--VKVSD---YVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNF-- 118 (235)
T ss_dssp CEEEEEETCTTCHHHHHHGGGST-TSEEEEEESC--HHHHH---HHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHH--
T ss_pred CCeEEEEccCCcHHHHHHHHHCC-CCeEEEEECC--HHHHH---HHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhh--
Confidence 35789999888888999998863 5677776544 33333 25667777753 22 22344568876 4322
Q ss_pred ccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCCCCcccHHhHHHHhCcEEE
Q 044601 89 LRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDPYNKWELVKKAEKIGLTLQ 168 (213)
Q Consensus 89 l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py~~W~i~~lA~~~gl~l~ 168 (213)
+....||+|+.+||-.-.+... ...|.+...|++.+..+|+ ++|.++++... ..|..|-++.+.+..++...
T Consensus 119 ~~~~~~D~v~~~~~dp~~k~~h------~krr~~~~~~l~~~~~~Lk-pGG~l~~~td~-~~~~~~~~~~l~~~~~f~~~ 190 (235)
T 3ckk_A 119 FYKGQLTKMFFLFPDPHFKRTK------HKWRIISPTLLAEYAYVLR-VGGLVYTITDV-LELHDWMCTHFEEHPLFERV 190 (235)
T ss_dssp CCTTCEEEEEEESCC-----------------CCCHHHHHHHHHHEE-EEEEEEEEESC-HHHHHHHHHHHHTSTTEEEE
T ss_pred CCCcCeeEEEEeCCCchhhhhh------hhhhhhhHHHHHHHHHHCC-CCCEEEEEeCC-HHHHHHHHHHHHHCCCcccc
Confidence 2357899999999865433111 1122224578999999998 99999987643 45677877777766655443
No 39
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=96.94 E-value=0.017 Score=46.12 Aligned_cols=135 Identities=15% Similarity=0.119 Sum_probs=85.6
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCC------EE-EEeeeccccC
Q 044601 12 YSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGC------LV-FYGVDAMQMS 84 (213)
Q Consensus 12 y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~------~V-~~gVDAt~L~ 84 (213)
..++.+||=||=|.=.++..|++. +.++++.-.+. .+.+ .+..+ ++..+. .+ +...|+..+.
T Consensus 28 ~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~--~~~~---~a~~~---~~~~~~~~~~~~~~~~~~~d~~~~~ 96 (235)
T 3sm3_A 28 LQEDDEILDIGCGSGKISLELASK---GYSVTGIDINS--EAIR---LAETA---ARSPGLNQKTGGKAEFKVENASSLS 96 (235)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCH--HHHH---HHHHH---TTCCSCCSSSSCEEEEEECCTTSCC
T ss_pred CCCCCeEEEECCCCCHHHHHHHhC---CCeEEEEECCH--HHHH---HHHHH---HHhcCCccccCcceEEEEecccccC
Confidence 346789999999998999999877 34677665542 2222 12222 233343 23 4455666553
Q ss_pred CCccccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCC---------------
Q 044601 85 QHFFLRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGD--------------- 149 (213)
Q Consensus 85 ~~~~l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~--------------- 149 (213)
+....||.|+.+....-. .+......+++.+..+|+ ++|.+.++.....
T Consensus 97 ----~~~~~~D~v~~~~~l~~~-----------~~~~~~~~~l~~~~~~L~-pgG~l~~~~~~~~~~~~~~~~~~~~~~~ 160 (235)
T 3sm3_A 97 ----FHDSSFDFAVMQAFLTSV-----------PDPKERSRIIKEVFRVLK-PGAYLYLVEFGQNWHLKLYRKRYLHDFP 160 (235)
T ss_dssp ----SCTTCEEEEEEESCGGGC-----------CCHHHHHHHHHHHHHHEE-EEEEEEEEEEBCCTTSHHHHHHHHHHHH
T ss_pred ----CCCCceeEEEEcchhhcC-----------CCHHHHHHHHHHHHHHcC-CCeEEEEEECCcchhHHHHHHHhhhhcc
Confidence 335789999998543332 122334478888999998 9999888743211
Q ss_pred -----------------------CCCcccHHhHHHHhCcEEEEEeec
Q 044601 150 -----------------------PYNKWELVKKAEKIGLTLQEVVPF 173 (213)
Q Consensus 150 -----------------------py~~W~i~~lA~~~gl~l~~~~~F 173 (213)
.++.-.+..+.+++||.+++....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aGf~~~~~~~~ 207 (235)
T 3sm3_A 161 ITKEEGSFLARDPETGETEFIAHHFTEKELVFLLTDCRFEIDYFRVK 207 (235)
T ss_dssp HHCSTTEEEEECTTTCCEEEEEECBCHHHHHHHHHTTTEEEEEEEEE
T ss_pred chhhhcceEecccccCCcceeeEeCCHHHHHHHHHHcCCEEEEEEec
Confidence 133445667888899998887553
No 40
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=96.94 E-value=0.0033 Score=54.70 Aligned_cols=112 Identities=13% Similarity=0.154 Sum_probs=69.7
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHH-----hCCCEEEEeeeccccCCCc
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELE-----ERGCLVFYGVDAMQMSQHF 87 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~-----~~g~~V~~gVDAt~L~~~~ 87 (213)
.+..+||.||=|+=..+..|+++. +...|++.-+|.. +.+ -+.+++..+. .-.++++ --|+.+.-..
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~V~~VDid~~--vi~---~ar~~~~~~~~~~~~~~rv~~~-~~D~~~~l~~- 153 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHK-NVESITMVEIDAG--VVS---FCRQYLPNHNAGSYDDPRFKLV-IDDGVNFVNQ- 153 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCT-TCCEEEEECSCTT--HHH---HHHHHCHHHHSSCTTCTTCCEE-CSCSCC---C-
T ss_pred CCCCEEEEEeCChhHHHHHHHhCC-CCCEEEEEECCHH--HHH---HHHHhhhhcccccccCCceEEE-EChHHHHHhh-
Confidence 356899999999999999999874 3567888777742 222 1344555442 2245444 4466553222
Q ss_pred cccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEe
Q 044601 88 FLRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTH 145 (213)
Q Consensus 88 ~l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl 145 (213)
...+||.||-|.|..-.. .....-..||+.+..+|+ ++|.+.+..
T Consensus 154 --~~~~fDvIi~D~~~p~~~----------~~~l~~~~f~~~~~~~Lk-pgG~lv~~~ 198 (294)
T 3adn_A 154 --TSQTFDVIISDCTDPIGP----------GESLFTSAFYEGCKRCLN-PGGIFVAQN 198 (294)
T ss_dssp --CCCCEEEEEECC--------------------CCHHHHHHHHHTEE-EEEEEEEEE
T ss_pred --cCCCccEEEECCCCccCc----------chhccHHHHHHHHHHhcC-CCCEEEEec
Confidence 247899999998764321 111112679999999998 999888765
No 41
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=96.94 E-value=0.017 Score=45.65 Aligned_cols=128 Identities=16% Similarity=0.167 Sum_probs=86.3
Q ss_pred CCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCCcc
Q 044601 15 KQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTHKF 94 (213)
Q Consensus 15 ~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~~F 94 (213)
..+||=||=|.=.++..|++. +..+++.-.+ .++.+. +..+ ..++. +...|+..+. +....|
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s--~~~~~~---a~~~-----~~~~~-~~~~d~~~~~----~~~~~f 103 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL---GHQIEGLEPA--TRLVEL---ARQT-----HPSVT-FHHGTITDLS----DSPKRW 103 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT---TCCEEEECCC--HHHHHH---HHHH-----CTTSE-EECCCGGGGG----GSCCCE
T ss_pred CCeEEEecCCCCHHHHHHHhc---CCeEEEEeCC--HHHHHH---HHHh-----CCCCe-EEeCcccccc----cCCCCe
Confidence 789999999999999999877 3466665443 222221 2222 11344 3455777653 335789
Q ss_pred cEEEEcCC--cCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCC-------------CCcccHHhH
Q 044601 95 DRVIYNFP--HVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDP-------------YNKWELVKK 159 (213)
Q Consensus 95 DrIiFNFP--H~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~p-------------y~~W~i~~l 159 (213)
|.|+.++. |+.. .-+..+++.+..+|+ ++|.+.|+...... ++.-.+..+
T Consensus 104 D~v~~~~~l~~~~~--------------~~~~~~l~~~~~~L~-pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (203)
T 3h2b_A 104 AGLLAWYSLIHMGP--------------GELPDALVALRMAVE-DGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQA 168 (203)
T ss_dssp EEEEEESSSTTCCT--------------TTHHHHHHHHHHTEE-EEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHH
T ss_pred EEEEehhhHhcCCH--------------HHHHHHHHHHHHHcC-CCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHH
Confidence 99999653 3321 113467888899998 99999998865532 233456678
Q ss_pred HHHhCcEEEEEeecCC
Q 044601 160 AEKIGLTLQEVVPFCK 175 (213)
Q Consensus 160 A~~~gl~l~~~~~F~~ 175 (213)
.+++||.+.+...+..
T Consensus 169 l~~~Gf~~~~~~~~~~ 184 (203)
T 3h2b_A 169 LETAGFQVTSSHWDPR 184 (203)
T ss_dssp HHHTTEEEEEEEECTT
T ss_pred HHHCCCcEEEEEecCC
Confidence 8999999999988876
No 42
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=96.90 E-value=0.015 Score=46.07 Aligned_cols=128 Identities=17% Similarity=0.156 Sum_probs=84.1
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCCc
Q 044601 14 SKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTHK 93 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~~ 93 (213)
+..+||=||=|.=.++..|++. +.+++++-++ +++ ++..++.+.......|+..+.........+
T Consensus 52 ~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s--~~~----------~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (227)
T 3e8s_A 52 QPERVLDLGCGEGWLLRALADR---GIEAVGVDGD--RTL----------VDAARAAGAGEVHLASYAQLAEAKVPVGKD 116 (227)
T ss_dssp CCSEEEEETCTTCHHHHHHHTT---TCEEEEEESC--HHH----------HHHHHHTCSSCEEECCHHHHHTTCSCCCCC
T ss_pred CCCEEEEeCCCCCHHHHHHHHC---CCEEEEEcCC--HHH----------HHHHHHhcccccchhhHHhhcccccccCCC
Confidence 4589999999999999999877 3467666444 222 222233343345556777774443334567
Q ss_pred ccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCC-----------------------
Q 044601 94 FDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDP----------------------- 150 (213)
Q Consensus 94 FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~p----------------------- 150 (213)
||.|+.++... .. + ...+++.+..+|+ ++|.+.|+......
T Consensus 117 fD~v~~~~~l~-~~---~-----------~~~~l~~~~~~L~-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (227)
T 3e8s_A 117 YDLICANFALL-HQ---D-----------IIELLSAMRTLLV-PGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQ 180 (227)
T ss_dssp EEEEEEESCCC-SS---C-----------CHHHHHHHHHTEE-EEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCC
T ss_pred ccEEEECchhh-hh---h-----------HHHHHHHHHHHhC-CCeEEEEEecCccccCccccccccchhhhhccccCcc
Confidence 99999998766 21 1 1267888999998 99999987642110
Q ss_pred ------CCcccHHhHHHHhCcEEEEEee
Q 044601 151 ------YNKWELVKKAEKIGLTLQEVVP 172 (213)
Q Consensus 151 ------y~~W~i~~lA~~~gl~l~~~~~ 172 (213)
++.=++..+.+++||.+.+...
T Consensus 181 ~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 208 (227)
T 3e8s_A 181 PMPWYFRTLASWLNALDMAGLRLVSLQE 208 (227)
T ss_dssp CEEEEECCHHHHHHHHHHTTEEEEEEEC
T ss_pred cceEEEecHHHHHHHHHHcCCeEEEEec
Confidence 1223455688899999998765
No 43
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=96.89 E-value=0.0043 Score=48.23 Aligned_cols=118 Identities=15% Similarity=0.107 Sum_probs=70.6
Q ss_pred cccCCCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCc
Q 044601 8 WSNHYSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHF 87 (213)
Q Consensus 8 ~~~~y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~ 87 (213)
++....++.+||=+|=|.=.++..|++. + ...+++.-.+ +++.+ .+..|++...-.+-..+..-|+.+.-..
T Consensus 25 ~l~~~~~~~~vLDlGcG~G~~~~~l~~~-~-~~~v~~vD~~--~~~~~---~a~~~~~~~~~~~~~~~~~~d~~~~~~~- 96 (177)
T 2esr_A 25 MIGPYFNGGRVLDLFAGSGGLAIEAVSR-G-MSAAVLVEKN--RKAQA---IIQDNIIMTKAENRFTLLKMEAERAIDC- 96 (177)
T ss_dssp HHCSCCCSCEEEEETCTTCHHHHHHHHT-T-CCEEEEECCC--HHHHH---HHHHHHHTTTCGGGEEEECSCHHHHHHH-
T ss_pred HHHhhcCCCeEEEeCCCCCHHHHHHHHc-C-CCEEEEEECC--HHHHH---HHHHHHHHcCCCCceEEEECcHHHhHHh-
Confidence 3444567899999999998999998876 3 4577776555 22332 2444443321111123445577663211
Q ss_pred cccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCC
Q 044601 88 FLRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGD 149 (213)
Q Consensus 88 ~l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~ 149 (213)
....||.|+.|.|.... ....++..+.. ..+|+ ++|.+.+......
T Consensus 97 --~~~~fD~i~~~~~~~~~-----------~~~~~~~~l~~--~~~L~-~gG~l~~~~~~~~ 142 (177)
T 2esr_A 97 --LTGRFDLVFLDPPYAKE-----------TIVATIEALAA--KNLLS-EQVMVVCETDKTV 142 (177)
T ss_dssp --BCSCEEEEEECCSSHHH-----------HHHHHHHHHHH--TTCEE-EEEEEEEEEETTC
T ss_pred --hcCCCCEEEECCCCCcc-----------hHHHHHHHHHh--CCCcC-CCcEEEEEECCcc
Confidence 13569999999885211 12333444433 58898 9999999876554
No 44
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=96.88 E-value=0.012 Score=48.02 Aligned_cols=137 Identities=12% Similarity=0.134 Sum_probs=86.8
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccC
Q 044601 12 YSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRT 91 (213)
Q Consensus 12 y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~ 91 (213)
..++.+||=||=|.=.++..|++.+ +..+++.-.+. + +.+. +..++... .-.-....|++++. +..
T Consensus 53 ~~~~~~vLdiG~G~G~~~~~l~~~~--~~~v~~vD~s~-~-~~~~---a~~~~~~~---~~~~~~~~d~~~~~----~~~ 118 (266)
T 3ujc_A 53 LNENSKVLDIGSGLGGGCMYINEKY--GAHTHGIDICS-N-IVNM---ANERVSGN---NKIIFEANDILTKE----FPE 118 (266)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCH-H-HHHH---HHHTCCSC---TTEEEEECCTTTCC----CCT
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHc--CCEEEEEeCCH-H-HHHH---HHHHhhcC---CCeEEEECccccCC----CCC
Confidence 3467899999999999999999987 35777665542 2 1111 11111111 22234456777752 335
Q ss_pred CcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCC-------------------CC
Q 044601 92 HKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDP-------------------YN 152 (213)
Q Consensus 92 ~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~p-------------------y~ 152 (213)
..||.|+.+...--. ...-...+++.+..+|+ |+|.+.|+-....+ ++
T Consensus 119 ~~fD~v~~~~~l~~~------------~~~~~~~~l~~~~~~L~-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (266)
T 3ujc_A 119 NNFDLIYSRDAILAL------------SLENKNKLFQKCYKWLK-PTGTLLITDYCATEKENWDDEFKEYVKQRKYTLIT 185 (266)
T ss_dssp TCEEEEEEESCGGGS------------CHHHHHHHHHHHHHHEE-EEEEEEEEEEEESCGGGCCHHHHHHHHHHTCCCCC
T ss_pred CcEEEEeHHHHHHhc------------ChHHHHHHHHHHHHHcC-CCCEEEEEEeccCCcccchHHHHHHHhcCCCCCCC
Confidence 789999987432111 11233578888999998 99998887532211 22
Q ss_pred cccHHhHHHHhCcEEEEEeecCC
Q 044601 153 KWELVKKAEKIGLTLQEVVPFCK 175 (213)
Q Consensus 153 ~W~i~~lA~~~gl~l~~~~~F~~ 175 (213)
.-.+..+.+++||..++...+..
T Consensus 186 ~~~~~~~l~~~Gf~~~~~~~~~~ 208 (266)
T 3ujc_A 186 VEEYADILTACNFKNVVSKDLSD 208 (266)
T ss_dssp HHHHHHHHHHTTCEEEEEEECHH
T ss_pred HHHHHHHHHHcCCeEEEEEeCCH
Confidence 33566788899999998877653
No 45
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=96.88 E-value=0.0053 Score=52.42 Aligned_cols=137 Identities=16% Similarity=0.061 Sum_probs=88.7
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCC---EEEEeeeccccCCCcc
Q 044601 12 YSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGC---LVFYGVDAMQMSQHFF 88 (213)
Q Consensus 12 y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~---~V~~gVDAt~L~~~~~ 88 (213)
..+..+||=||=|.=.++..|+.....+..+++.-.+ . ...+ .+..++ +..|. .-+..-|+.++.
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s-~-~~~~---~a~~~~---~~~~~~~~v~~~~~d~~~~~---- 183 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYD-P-EALD---GATRLA---AGHALAGQITLHRQDAWKLD---- 183 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESC-H-HHHH---HHHHHH---TTSTTGGGEEEEECCGGGCC----
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECC-H-HHHH---HHHHHH---HhcCCCCceEEEECchhcCC----
Confidence 3567899999999888888886443345677766554 2 2222 133333 33343 345667888763
Q ss_pred ccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCC------------------
Q 044601 89 LRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDP------------------ 150 (213)
Q Consensus 89 l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~p------------------ 150 (213)
.. ..||.|+.+.+..-.. +..-...|++.+..+|+ |+|.+.|+.....|
T Consensus 184 ~~-~~fD~v~~~~~~~~~~-----------~~~~~~~~l~~~~~~Lk-pgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~ 250 (305)
T 3ocj_A 184 TR-EGYDLLTSNGLNIYEP-----------DDARVTELYRRFWQALK-PGGALVTSFLTPPPALSPDSPWDMQAIDPHDL 250 (305)
T ss_dssp CC-SCEEEEECCSSGGGCC-----------CHHHHHHHHHHHHHHEE-EEEEEEEECCCCCTTTCTTCCCCGGGSCHHHH
T ss_pred cc-CCeEEEEECChhhhcC-----------CHHHHHHHHHHHHHhcC-CCeEEEEEecCCCCcccccccceeeccccchh
Confidence 23 7899999877554321 12334568899999998 99999987643211
Q ss_pred ------------------CCcccHHhHHHHhCcEEEEEeec
Q 044601 151 ------------------YNKWELVKKAEKIGLTLQEVVPF 173 (213)
Q Consensus 151 ------------------y~~W~i~~lA~~~gl~l~~~~~F 173 (213)
++.-.+..+.+++||..++....
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~ 291 (305)
T 3ocj_A 251 QLQQLVFTRLIQPRWNALRTHAQTRAQLEEAGFTDLRFEDD 291 (305)
T ss_dssp HHHHHHHHHTTCCSCCCCCCHHHHHHHHHHTTCEEEEEECC
T ss_pred hhhhhHHHHHHhhhhhccCCHHHHHHHHHHCCCEEEEEEcc
Confidence 12334567888999999888763
No 46
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=96.88 E-value=0.0039 Score=56.19 Aligned_cols=137 Identities=14% Similarity=0.083 Sum_probs=87.4
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCCc
Q 044601 14 SKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTHK 93 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~~ 93 (213)
++.+||=+|=|.=.++..|++. +..|++.-.+ . ...+ .+..|++... ..++++ .-|+.++.. ....
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~---g~~V~gvDis-~-~al~---~A~~n~~~~~-~~v~~~-~~D~~~~~~----~~~~ 298 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARM---GAEVVGVEDD-L-ASVL---SLQKGLEANA-LKAQAL-HSDVDEALT----EEAR 298 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHT---TCEEEEEESB-H-HHHH---HHHHHHHHTT-CCCEEE-ECSTTTTSC----TTCC
T ss_pred CCCEEEEEeeeCCHHHHHHHHc---CCEEEEEECC-H-HHHH---HHHHHHHHcC-CCeEEE-Ecchhhccc----cCCC
Confidence 5679999999998999999876 3477766554 2 2222 2555554322 124443 456665432 2478
Q ss_pred ccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCCCCcc------cHHhHHHHhCcEE
Q 044601 94 FDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDPYNKW------ELVKKAEKIGLTL 167 (213)
Q Consensus 94 FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py~~W------~i~~lA~~~gl~l 167 (213)
||.||.|.|...+.. .....+..|+..+..+|+ ++|.+.|......+|..| +++.+ +..||++
T Consensus 299 fD~Ii~npp~~~~~~---------~~~~~~~~~l~~~~~~Lk-pGG~l~iv~n~~l~~~~~l~~~f~~v~~l-~~~gF~V 367 (381)
T 3dmg_A 299 FDIIVTNPPFHVGGA---------VILDVAQAFVNVAAARLR-PGGVFFLVSNPFLKYEPLLEEKFGAFQTL-KVAEYKV 367 (381)
T ss_dssp EEEEEECCCCCTTCS---------SCCHHHHHHHHHHHHHEE-EEEEEEEEECTTSCHHHHHHHHHSCCEEE-EESSSEE
T ss_pred eEEEEECCchhhccc---------ccHHHHHHHHHHHHHhcC-cCcEEEEEEcCCCChHHHHHHhhccEEEE-eCCCEEE
Confidence 999999999665321 122456789999999998 999999987655554332 23334 6667777
Q ss_pred EEEeecCC
Q 044601 168 QEVVPFCK 175 (213)
Q Consensus 168 ~~~~~F~~ 175 (213)
.+......
T Consensus 368 l~a~~~~~ 375 (381)
T 3dmg_A 368 LFAEKRGR 375 (381)
T ss_dssp EEEECC--
T ss_pred EEEEEecc
Confidence 77655443
No 47
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=96.83 E-value=0.0088 Score=49.25 Aligned_cols=135 Identities=19% Similarity=0.162 Sum_probs=87.7
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccC
Q 044601 12 YSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRT 91 (213)
Q Consensus 12 y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~ 91 (213)
..++.+||=+|=|.=.++..|++..++...+++.-.+ ++..+ .+..|++...-.+......-|+... +..
T Consensus 91 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~--~~~~~---~a~~~~~~~~~~~~v~~~~~d~~~~-----~~~ 160 (255)
T 3mb5_A 91 ISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIR--EDFAK---LAWENIKWAGFDDRVTIKLKDIYEG-----IEE 160 (255)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSC--HHHHH---HHHHHHHHHTCTTTEEEECSCGGGC-----CCC
T ss_pred CCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecC--HHHHH---HHHHHHHHcCCCCceEEEECchhhc-----cCC
Confidence 3567899999999999999999987666777776444 33333 2556665543223234555676643 234
Q ss_pred CcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCCCCcccHHhHHHHhC--cEEEE
Q 044601 92 HKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDPYNKWELVKKAEKIG--LTLQE 169 (213)
Q Consensus 92 ~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py~~W~i~~lA~~~g--l~l~~ 169 (213)
..||.|+.|.|..- .++..+..+|+ ++|.+.+...... ....+....++.| |...+
T Consensus 161 ~~~D~v~~~~~~~~-------------------~~l~~~~~~L~-~gG~l~~~~~~~~--~~~~~~~~l~~~g~~f~~~~ 218 (255)
T 3mb5_A 161 ENVDHVILDLPQPE-------------------RVVEHAAKALK-PGGFFVAYTPCSN--QVMRLHEKLREFKDYFMKPR 218 (255)
T ss_dssp CSEEEEEECSSCGG-------------------GGHHHHHHHEE-EEEEEEEEESSHH--HHHHHHHHHHHTGGGBSCCE
T ss_pred CCcCEEEECCCCHH-------------------HHHHHHHHHcC-CCCEEEEEECCHH--HHHHHHHHHHHcCCCccccE
Confidence 67999999877431 56888899998 9999987653211 2233455666777 77666
Q ss_pred EeecCCCCC
Q 044601 170 VVPFCKQDY 178 (213)
Q Consensus 170 ~~~F~~~~y 178 (213)
........|
T Consensus 219 ~~e~~~r~~ 227 (255)
T 3mb5_A 219 TINVLVFDQ 227 (255)
T ss_dssp EECCCCCCE
T ss_pred EEEEeeeee
Confidence 655444333
No 48
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=96.82 E-value=0.0042 Score=48.27 Aligned_cols=121 Identities=13% Similarity=0.099 Sum_probs=72.5
Q ss_pred ccCCCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHh-CCCEEEEeeeccccCCCc
Q 044601 9 SNHYSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEE-RGCLVFYGVDAMQMSQHF 87 (213)
Q Consensus 9 ~~~y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~-~g~~V~~gVDAt~L~~~~ 87 (213)
+....++.+||=+|=|.=.++..+++. + ...+++.-.+. ++.+ .+..|++...- ..+. ++.-|+.++....
T Consensus 39 l~~~~~~~~vLD~GcG~G~~~~~~~~~-~-~~~v~~vD~~~--~~~~---~a~~~~~~~~~~~~~~-~~~~d~~~~~~~~ 110 (187)
T 2fhp_A 39 IGPYFDGGMALDLYSGSGGLAIEAVSR-G-MDKSICIEKNF--AALK---VIKENIAITKEPEKFE-VRKMDANRALEQF 110 (187)
T ss_dssp HCSCCSSCEEEETTCTTCHHHHHHHHT-T-CSEEEEEESCH--HHHH---HHHHHHHHHTCGGGEE-EEESCHHHHHHHH
T ss_pred HHhhcCCCCEEEeCCccCHHHHHHHHc-C-CCEEEEEECCH--HHHH---HHHHHHHHhCCCcceE-EEECcHHHHHHHH
Confidence 444567889999988888888888763 2 45787776662 2332 25556554421 1233 4456776643221
Q ss_pred cccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCCC
Q 044601 88 FLRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDPY 151 (213)
Q Consensus 88 ~l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py 151 (213)
......||.|+.|.|..-. ....++... .+..+|+ ++|.+.+........
T Consensus 111 ~~~~~~fD~i~~~~~~~~~-----------~~~~~~~~l--~~~~~L~-~gG~l~~~~~~~~~~ 160 (187)
T 2fhp_A 111 YEEKLQFDLVLLDPPYAKQ-----------EIVSQLEKM--LERQLLT-NEAVIVCETDKTVKL 160 (187)
T ss_dssp HHTTCCEEEEEECCCGGGC-----------CHHHHHHHH--HHTTCEE-EEEEEEEEEETTCCC
T ss_pred HhcCCCCCEEEECCCCCch-----------hHHHHHHHH--HHhcccC-CCCEEEEEeCCcccc
Confidence 1124679999999993311 111222222 1478898 999999988765543
No 49
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=96.81 E-value=0.0099 Score=49.62 Aligned_cols=106 Identities=21% Similarity=0.181 Sum_probs=72.8
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHH-H--hCCCEEEEeeeccccCCCcc
Q 044601 12 YSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVREL-E--ERGCLVFYGVDAMQMSQHFF 88 (213)
Q Consensus 12 y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L-~--~~g~~V~~gVDAt~L~~~~~ 88 (213)
..++.+||-+|=|.=+++.+|++..++...+++.-.+ ++..+ .+..|++.. . ...+. +..-|+..+.
T Consensus 97 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~--~~~~~---~a~~~~~~~~g~~~~~v~-~~~~d~~~~~---- 166 (280)
T 1i9g_A 97 IFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQR--ADHAE---HARRNVSGCYGQPPDNWR-LVVSDLADSE---- 166 (280)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSC--HHHHH---HHHHHHHHHHTSCCTTEE-EECSCGGGCC----
T ss_pred CCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCC--HHHHH---HHHHHHHHhcCCCCCcEE-EEECchHhcC----
Confidence 3567899999999999999999987656677766554 33333 255566544 2 11233 3455777652
Q ss_pred ccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEecc
Q 044601 89 LRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKE 147 (213)
Q Consensus 89 l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~ 147 (213)
+....||.|+.|.|+.- .++..+..+|+ ++|.+.+....
T Consensus 167 ~~~~~~D~v~~~~~~~~-------------------~~l~~~~~~L~-pgG~l~~~~~~ 205 (280)
T 1i9g_A 167 LPDGSVDRAVLDMLAPW-------------------EVLDAVSRLLV-AGGVLMVYVAT 205 (280)
T ss_dssp CCTTCEEEEEEESSCGG-------------------GGHHHHHHHEE-EEEEEEEEESS
T ss_pred CCCCceeEEEECCcCHH-------------------HHHHHHHHhCC-CCCEEEEEeCC
Confidence 23567999999887332 46888899998 99999887743
No 50
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=96.81 E-value=0.0029 Score=54.75 Aligned_cols=113 Identities=12% Similarity=0.169 Sum_probs=70.8
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHH----hCCCEEEEeeeccccCCCccc
Q 044601 14 SKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELE----ERGCLVFYGVDAMQMSQHFFL 89 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~----~~g~~V~~gVDAt~L~~~~~l 89 (213)
+..+||.||=|+=.++..|+++.+ ...|++.-.|. ++.+ -+.+|+..+. ...++++.+ |+.+.-..
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~--~~~~---~a~~~~~~~~~~~~~~~v~~~~~-D~~~~l~~--- 159 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDS-VEKAILCEVDG--LVIE---AARKYLKQTSCGFDDPRAEIVIA-NGAEYVRK--- 159 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTT-CSEEEEEESCH--HHHH---HHHHHCHHHHGGGGCTTEEEEES-CHHHHGGG---
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCC-CCEEEEEECCH--HHHH---HHHHHhHhhccccCCCceEEEEC-cHHHHHhh---
Confidence 468999999999999999998753 56888877763 2222 1445554432 234555544 77653211
Q ss_pred cCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEec
Q 044601 90 RTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHK 146 (213)
Q Consensus 90 ~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~ 146 (213)
...+||.||.|.|+.+... ........|++.+..+|+ ++|.+.+...
T Consensus 160 ~~~~fD~Ii~d~~~~~~~~---------~~~l~~~~~l~~~~~~Lk-pgG~lv~~~~ 206 (296)
T 1inl_A 160 FKNEFDVIIIDSTDPTAGQ---------GGHLFTEEFYQACYDALK-EDGVFSAETE 206 (296)
T ss_dssp CSSCEEEEEEEC-------------------CCSHHHHHHHHHHEE-EEEEEEEECC
T ss_pred CCCCceEEEEcCCCcccCc---------hhhhhHHHHHHHHHHhcC-CCcEEEEEcc
Confidence 1467999999987642110 001123588999999998 9999888753
No 51
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=96.78 E-value=0.011 Score=50.46 Aligned_cols=130 Identities=17% Similarity=0.174 Sum_probs=83.1
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCC---EEEEeeeccccCCCccc
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGC---LVFYGVDAMQMSQHFFL 89 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~---~V~~gVDAt~L~~~~~l 89 (213)
.++.+||=||=|.=.++..|++.++ ..+++.-.+ .+.+.. +..+ ++..|. .-....|+..+.
T Consensus 89 ~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s-~~~~~~----a~~~---~~~~~~~~~v~~~~~d~~~~~----- 153 (318)
T 2fk8_A 89 KPGMTLLDIGCGWGTTMRRAVERFD--VNVIGLTLS-KNQHAR----CEQV---LASIDTNRSRQVLLQGWEDFA----- 153 (318)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHC--CEEEEEESC-HHHHHH----HHHH---HHTSCCSSCEEEEESCGGGCC-----
T ss_pred CCcCEEEEEcccchHHHHHHHHHCC--CEEEEEECC-HHHHHH----HHHH---HHhcCCCCceEEEECChHHCC-----
Confidence 4678999999999999999998874 477766554 222221 3333 233332 223445776652
Q ss_pred cCCcccEEEEcCC--cCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCC-----------------
Q 044601 90 RTHKFDRVIYNFP--HVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDP----------------- 150 (213)
Q Consensus 90 ~~~~FDrIiFNFP--H~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~p----------------- 150 (213)
..||.|+.+.. |++. .-...+++.+..+|+ |+|.+.|+......
T Consensus 154 --~~fD~v~~~~~l~~~~~--------------~~~~~~l~~~~~~Lk-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (318)
T 2fk8_A 154 --EPVDRIVSIEAFEHFGH--------------ENYDDFFKRCFNIMP-ADGRMTVQSSVSYHPYEMAARGKKLSFETAR 216 (318)
T ss_dssp --CCCSEEEEESCGGGTCG--------------GGHHHHHHHHHHHSC-TTCEEEEEEEECCCHHHHHTTCHHHHHHHHH
T ss_pred --CCcCEEEEeChHHhcCH--------------HHHHHHHHHHHHhcC-CCcEEEEEEeccCCchhhhhccccccccccc
Confidence 67999998843 3431 113468888999998 99998887543221
Q ss_pred ---------------CCcccHHhHHHHhCcEEEEEeecC
Q 044601 151 ---------------YNKWELVKKAEKIGLTLQEVVPFC 174 (213)
Q Consensus 151 ---------------y~~W~i~~lA~~~gl~l~~~~~F~ 174 (213)
++.=.+..+.+++||.+++...+.
T Consensus 217 ~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~~~~~ 255 (318)
T 2fk8_A 217 FIKFIVTEIFPGGRLPSTEMMVEHGEKAGFTVPEPLSLR 255 (318)
T ss_dssp HHHHHHHHTSTTCCCCCHHHHHHHHHHTTCBCCCCEECH
T ss_pred hhhHHHHhcCCCCcCCCHHHHHHHHHhCCCEEEEEEecc
Confidence 111245567778899888776654
No 52
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=96.77 E-value=0.028 Score=47.20 Aligned_cols=135 Identities=13% Similarity=0.050 Sum_probs=87.0
Q ss_pred CCCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHh-CCCEEEEeeeccccCCCccc
Q 044601 11 HYSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEE-RGCLVFYGVDAMQMSQHFFL 89 (213)
Q Consensus 11 ~y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~-~g~~V~~gVDAt~L~~~~~l 89 (213)
...+..+||=||=|.=.++..|++.++ ..+++.-.. .+ +.+ .+..++....- ..+.+ ...|+..+. +
T Consensus 79 ~~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvD~s-~~-~~~---~a~~~~~~~~~~~~~~~-~~~d~~~~~----~ 146 (297)
T 2o57_A 79 VLQRQAKGLDLGAGYGGAARFLVRKFG--VSIDCLNIA-PV-QNK---RNEEYNNQAGLADNITV-KYGSFLEIP----C 146 (297)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEESC-HH-HHH---HHHHHHHHHTCTTTEEE-EECCTTSCS----S
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhC--CEEEEEeCC-HH-HHH---HHHHHHHhcCCCcceEE-EEcCcccCC----C
Confidence 456789999999999999999999874 466666544 22 222 13333332211 12333 344777653 3
Q ss_pred cCCcccEEEEcCC--cCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCC---C--------------
Q 044601 90 RTHKFDRVIYNFP--HVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGD---P-------------- 150 (213)
Q Consensus 90 ~~~~FDrIiFNFP--H~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~---p-------------- 150 (213)
....||.|+.+.. |+.. ...+++.+..+|+ |+|.+.|+-.... +
T Consensus 147 ~~~~fD~v~~~~~l~~~~~----------------~~~~l~~~~~~Lk-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (297)
T 2o57_A 147 EDNSYDFIWSQDAFLHSPD----------------KLKVFQECARVLK-PRGVMAITDPMKEDGIDKSSIQPILDRIKLH 209 (297)
T ss_dssp CTTCEEEEEEESCGGGCSC----------------HHHHHHHHHHHEE-EEEEEEEEEEEECTTCCGGGGHHHHHHHTCS
T ss_pred CCCCEeEEEecchhhhcCC----------------HHHHHHHHHHHcC-CCeEEEEEEeccCCCCchHHHHHHHHHhcCC
Confidence 4578999998753 3321 3578899999998 9999888743211 1
Q ss_pred --CCcccHHhHHHHhCcEEEEEeecC
Q 044601 151 --YNKWELVKKAEKIGLTLQEVVPFC 174 (213)
Q Consensus 151 --y~~W~i~~lA~~~gl~l~~~~~F~ 174 (213)
.+.-.+..+.+++||.+++..+..
T Consensus 210 ~~~~~~~~~~~l~~aGf~~~~~~~~~ 235 (297)
T 2o57_A 210 DMGSLGLYRSLAKECGLVTLRTFSRP 235 (297)
T ss_dssp SCCCHHHHHHHHHHTTEEEEEEEECH
T ss_pred CCCCHHHHHHHHHHCCCeEEEEEECc
Confidence 112235568889999999887654
No 53
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=96.76 E-value=0.013 Score=53.06 Aligned_cols=146 Identities=18% Similarity=0.098 Sum_probs=94.5
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCC
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTH 92 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~ 92 (213)
.++++||=+|=|.=.++..|++..+ ...|+|.-.+.. .+ ..+..|++.+.- .+. +...|++++.... ...
T Consensus 245 ~~g~~VLDlgaG~G~~t~~la~~~~-~~~v~a~D~~~~-~l----~~~~~~~~~~g~-~~~-~~~~D~~~~~~~~--~~~ 314 (429)
T 1sqg_A 245 QNGEHILDLCAAPGGKTTHILEVAP-EAQVVAVDIDEQ-RL----SRVYDNLKRLGM-KAT-VKQGDGRYPSQWC--GEQ 314 (429)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHCT-TCEEEEEESSTT-TH----HHHHHHHHHTTC-CCE-EEECCTTCTHHHH--TTC
T ss_pred CCcCeEEEECCCchHHHHHHHHHcC-CCEEEEECCCHH-HH----HHHHHHHHHcCC-CeE-EEeCchhhchhhc--ccC
Confidence 5678999999888888888988764 367877766542 11 124445543321 243 4456888765322 346
Q ss_pred cccEEEEcCCcCCCccc---cc-----chHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCCCCccc-HHh-HHHH
Q 044601 93 KFDRVIYNFPHVGFIFR---EN-----SYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDPYNKWE-LVK-KAEK 162 (213)
Q Consensus 93 ~FDrIiFNFPH~G~~~~---e~-----~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py~~W~-i~~-lA~~ 162 (213)
.||+|+.|-|+.|.+.. .+ ....+.....+-..++..+..+|+ ++|.+.++-|+-.|...-+ |.. +.+.
T Consensus 315 ~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~Lk-pGG~lvystcs~~~~ene~~v~~~l~~~ 393 (429)
T 1sqg_A 315 QFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLK-TGGTLVYATCSVLPEENSLQIKAFLQRT 393 (429)
T ss_dssp CEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEE-EEEEEEEEESCCCGGGTHHHHHHHHHHC
T ss_pred CCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcC-CCCEEEEEECCCChhhHHHHHHHHHHhC
Confidence 89999999999885321 00 112344455667899999999998 9999998887765544433 333 4555
Q ss_pred hCcEEEE
Q 044601 163 IGLTLQE 169 (213)
Q Consensus 163 ~gl~l~~ 169 (213)
.++.+..
T Consensus 394 ~~~~~~~ 400 (429)
T 1sqg_A 394 ADAELCE 400 (429)
T ss_dssp TTCEECS
T ss_pred CCCEEeC
Confidence 5777653
No 54
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=96.75 E-value=0.0086 Score=49.37 Aligned_cols=139 Identities=16% Similarity=0.137 Sum_probs=88.7
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCCc
Q 044601 14 SKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTHK 93 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~~ 93 (213)
+..+||=||=|.=.++..||+.. +..++++.-.. .+ ..+ .+..+++...-.+ .-+...||..+-.. .+....
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~-p~~~v~giD~s-~~-~l~---~a~~~~~~~~l~n-v~~~~~Da~~~l~~-~~~~~~ 105 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDR-PEQDFLGIEVH-SP-GVG---ACLASAHEEGLSN-LRVMCHDAVEVLHK-MIPDNS 105 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHC-TTSEEEEECSC-HH-HHH---HHHHHHHHTTCSS-EEEECSCHHHHHHH-HSCTTC
T ss_pred CCCeEEEEeeeChHHHHHHHHHC-CCCeEEEEEec-HH-HHH---HHHHHHHHhCCCc-EEEEECCHHHHHHH-HcCCCC
Confidence 46899999999989999999886 35677776443 32 222 2444544322123 34566788874221 123678
Q ss_pred ccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCCCCcccHHhHHHHhCcEEE
Q 044601 94 FDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDPYNKWELVKKAEKIGLTLQ 168 (213)
Q Consensus 94 FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py~~W~i~~lA~~~gl~l~ 168 (213)
||.|+.|||-.-.+.... ..|.+-..|+..+..+|+ |+|.++|.... .+|-.|-++.+.+..++...
T Consensus 106 ~d~v~~~~~~p~~~~~~~------~rr~~~~~~l~~~~r~Lk-pGG~l~i~td~-~~~~~~~~~~~~~~~~~~~~ 172 (218)
T 3dxy_A 106 LRMVQLFFPDPWHKARHN------KRRIVQVPFAELVKSKLQ-LGGVFHMATDW-EPYAEHMLEVMSSIDGYKNL 172 (218)
T ss_dssp EEEEEEESCCCCCSGGGG------GGSSCSHHHHHHHHHHEE-EEEEEEEEESC-HHHHHHHHHHHHTSTTEEEC
T ss_pred hheEEEeCCCCccchhhh------hhhhhhHHHHHHHHHHcC-CCcEEEEEeCC-HHHHHHHHHHHHhCCCcccc
Confidence 999999988654322111 112223468999999998 99999988743 45777777777777676543
No 55
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=96.73 E-value=0.021 Score=46.54 Aligned_cols=136 Identities=13% Similarity=0.102 Sum_probs=85.0
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccC
Q 044601 12 YSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRT 91 (213)
Q Consensus 12 y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~ 91 (213)
..++.+||=+|=|.=.++..|++..+....++|.-.. .+.+.. +.++.+.. .++. ....|+.+.... +...
T Consensus 75 ~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s-~~~i~~----~~~~a~~~--~~v~-~~~~d~~~~~~~-~~~~ 145 (233)
T 2ipx_A 75 IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFS-HRSGRD----LINLAKKR--TNII-PVIEDARHPHKY-RMLI 145 (233)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCC-HHHHHH----HHHHHHHC--TTEE-EECSCTTCGGGG-GGGC
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECC-HHHHHH----HHHHhhcc--CCeE-EEEcccCChhhh-cccC
Confidence 3457899999999999999999998655677666433 222211 11222111 2343 445677764321 1124
Q ss_pred CcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCC-----C----CCcccHHhHHHH
Q 044601 92 HKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGD-----P----YNKWELVKKAEK 162 (213)
Q Consensus 92 ~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~-----p----y~~W~i~~lA~~ 162 (213)
..||.|+.|.|... ....++..+..+|+ |+|.+.|+..... + +..+ ..+.++
T Consensus 146 ~~~D~V~~~~~~~~----------------~~~~~~~~~~~~Lk-pgG~l~i~~~~~~~~~~~~~~~~~~~~--~~~l~~ 206 (233)
T 2ipx_A 146 AMVDVIFADVAQPD----------------QTRIVALNAHTFLR-NGGHFVISIKANCIDSTASAEAVFASE--VKKMQQ 206 (233)
T ss_dssp CCEEEEEECCCCTT----------------HHHHHHHHHHHHEE-EEEEEEEEEEHHHHCSSSCHHHHHHHH--HHTTGG
T ss_pred CcEEEEEEcCCCcc----------------HHHHHHHHHHHHcC-CCeEEEEEEcccccccCCCHHHHHHHH--HHHHHH
Confidence 68999999988211 12346677899998 9999999775421 0 1111 355577
Q ss_pred hCcEEEEEeecCC
Q 044601 163 IGLTLQEVVPFCK 175 (213)
Q Consensus 163 ~gl~l~~~~~F~~ 175 (213)
+||.+.+..+.++
T Consensus 207 ~Gf~~~~~~~~~~ 219 (233)
T 2ipx_A 207 ENMKPQEQLTLEP 219 (233)
T ss_dssp GTEEEEEEEECTT
T ss_pred CCCceEEEEecCC
Confidence 8999998877654
No 56
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=96.70 E-value=0.019 Score=47.85 Aligned_cols=137 Identities=21% Similarity=0.224 Sum_probs=86.7
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCC---EEEEeeeccccCCCccc
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGC---LVFYGVDAMQMSQHFFL 89 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~---~V~~gVDAt~L~~~~~l 89 (213)
.++.+||=||=|.=.++..|++. + ...+++.-.+ .+ +.+ .+..++ ...|. ......|+..+.-.
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~-~-~~~v~gvD~s-~~-~~~---~a~~~~---~~~~~~~~v~~~~~d~~~~~~~--- 129 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERA-G-IGEYYGVDIA-EV-SIN---DARVRA---RNMKRRFKVFFRAQDSYGRHMD--- 129 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHH-T-CSEEEEEESC-HH-HHH---HHHHHH---HTSCCSSEEEEEESCTTTSCCC---
T ss_pred CCCCeEEEECCCCCHHHHHHHHC-C-CCEEEEEECC-HH-HHH---HHHHHH---HhcCCCccEEEEECCccccccC---
Confidence 46789999998877777777765 3 3467666554 22 222 133332 33332 23445577776311
Q ss_pred cCCcccEEEEcCC-cCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccC--------------------
Q 044601 90 RTHKFDRVIYNFP-HVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEG-------------------- 148 (213)
Q Consensus 90 ~~~~FDrIiFNFP-H~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~-------------------- 148 (213)
....||.|+.++. |... .+..-+..+++.+..+|+ |+|.+.|+....
T Consensus 130 ~~~~fD~v~~~~~l~~~~-----------~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (298)
T 1ri5_A 130 LGKEFDVISSQFSFHYAF-----------STSESLDIAQRNIARHLR-PGGYFIMTVPSRDVILERYKQGRMSNDFYKIE 197 (298)
T ss_dssp CSSCEEEEEEESCGGGGG-----------SSHHHHHHHHHHHHHTEE-EEEEEEEEEECHHHHHHHHHHTCCBCSSEEEE
T ss_pred CCCCcCEEEECchhhhhc-----------CCHHHHHHHHHHHHHhcC-CCCEEEEEECCHHHHHHHHccCccCCeeEEEE
Confidence 3578999998864 2211 122345678999999998 999998886431
Q ss_pred ------CC------C----------------CcccHHhHHHHhCcEEEEEeecC
Q 044601 149 ------DP------Y----------------NKWELVKKAEKIGLTLQEVVPFC 174 (213)
Q Consensus 149 ------~p------y----------------~~W~i~~lA~~~gl~l~~~~~F~ 174 (213)
-| | +.=.+..+++++||.+++...|.
T Consensus 198 ~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~l~~ll~~aGf~~v~~~~~~ 251 (298)
T 1ri5_A 198 LEKMEDVPMESVREYRFTLLDSVNNCIEYFVDFTRMVDGFKRLGLSLVERKGFI 251 (298)
T ss_dssp CCCCSSCCTTTCCEEEEEETTSCSSEEEECCCHHHHHHHHHTTTEEEEEEEEHH
T ss_pred eCccccccccccceEEEEEchhhcCCcccccCHHHHHHHHHHcCCEEEEecCHH
Confidence 01 1 11256778999999999998875
No 57
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=96.67 E-value=0.014 Score=54.28 Aligned_cols=147 Identities=17% Similarity=0.164 Sum_probs=98.2
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCC
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTH 92 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~ 92 (213)
.++.+||=+|=|-=+.|..||+..+....|+|.-.+ .+.+ + .+.+|++.+.-. +. +..-|++++.... ..
T Consensus 100 ~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis-~~~l-~---~a~~n~~r~G~~-v~-~~~~Da~~l~~~~---~~ 169 (464)
T 3m6w_A 100 KPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVD-GKRV-R---GLLENVERWGAP-LA-VTQAPPRALAEAF---GT 169 (464)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSC-HHHH-H---HHHHHHHHHCCC-CE-EECSCHHHHHHHH---CS
T ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECC-HHHH-H---HHHHHHHHcCCe-EE-EEECCHHHhhhhc---cc
Confidence 467899999888888899999887654577776444 2222 2 256676655332 43 3456888775322 46
Q ss_pred cccEEEEcCCcCCCccc---cc-----chHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCCC-CcccHHhHHHHh
Q 044601 93 KFDRVIYNFPHVGFIFR---EN-----SYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDPY-NKWELVKKAEKI 163 (213)
Q Consensus 93 ~FDrIiFNFPH~G~~~~---e~-----~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py-~~W~i~~lA~~~ 163 (213)
.||+|+.|=|..|.+.. .+ ....+.....+-..++.+|..+|+ ++|.+..+-|+-.|- +.-+|..+.++.
T Consensus 170 ~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~Lk-pGG~LvysTCs~~~eEne~vv~~~l~~~ 248 (464)
T 3m6w_A 170 YFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLG-PGGVLVYSTCTFAPEENEGVVAHFLKAH 248 (464)
T ss_dssp CEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEE-EEEEEEEEESCCCGGGTHHHHHHHHHHC
T ss_pred cCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEeccCchhcCHHHHHHHHHHC
Confidence 89999999999885321 11 123444556677889999999998 999998887765554 455666655554
Q ss_pred -CcEEEEE
Q 044601 164 -GLTLQEV 170 (213)
Q Consensus 164 -gl~l~~~ 170 (213)
++.+...
T Consensus 249 ~~~~l~~~ 256 (464)
T 3m6w_A 249 PEFRLEDA 256 (464)
T ss_dssp TTEEEECC
T ss_pred CCcEEEec
Confidence 6766543
No 58
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=96.66 E-value=0.022 Score=43.94 Aligned_cols=108 Identities=23% Similarity=0.283 Sum_probs=71.2
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCC--CEEEEeeeccccCCCcccc
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERG--CLVFYGVDAMQMSQHFFLR 90 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g--~~V~~gVDAt~L~~~~~l~ 90 (213)
.+..+||=+|=|.=.++..|++. +.++++.-.+. +..+ .+..++....-.+ +. +...|+.+.. .
T Consensus 51 ~~~~~vLdiG~G~G~~~~~~~~~---~~~v~~~D~~~--~~~~---~a~~~~~~~~~~~~~~~-~~~~d~~~~~-----~ 116 (194)
T 1dus_A 51 DKDDDILDLGCGYGVIGIALADE---VKSTTMADINR--RAIK---LAKENIKLNNLDNYDIR-VVHSDLYENV-----K 116 (194)
T ss_dssp CTTCEEEEETCTTSHHHHHHGGG---SSEEEEEESCH--HHHH---HHHHHHHHTTCTTSCEE-EEECSTTTTC-----T
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc---CCeEEEEECCH--HHHH---HHHHHHHHcCCCccceE-EEECchhccc-----c
Confidence 36789999999998888888877 45777776553 2222 2444443322112 33 3444665421 2
Q ss_pred CCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccC
Q 044601 91 THKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEG 148 (213)
Q Consensus 91 ~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~ 148 (213)
...||.|+.|.|.... ...+..+++.+..+|+ ++|.+.++....
T Consensus 117 ~~~~D~v~~~~~~~~~-------------~~~~~~~l~~~~~~L~-~gG~l~~~~~~~ 160 (194)
T 1dus_A 117 DRKYNKIITNPPIRAG-------------KEVLHRIIEEGKELLK-DNGEIWVVIQTK 160 (194)
T ss_dssp TSCEEEEEECCCSTTC-------------HHHHHHHHHHHHHHEE-EEEEEEEEEEST
T ss_pred cCCceEEEECCCcccc-------------hhHHHHHHHHHHHHcC-CCCEEEEEECCC
Confidence 5679999999885431 1345678899999998 999999987653
No 59
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=96.66 E-value=0.011 Score=50.14 Aligned_cols=105 Identities=11% Similarity=0.130 Sum_probs=66.7
Q ss_pred CCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCC-----CEEEEeeeccccCCCccc
Q 044601 15 KQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERG-----CLVFYGVDAMQMSQHFFL 89 (213)
Q Consensus 15 ~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g-----~~V~~gVDAt~L~~~~~l 89 (213)
..+||=||=|.=.++..|++. +..+++.-++ . ++.+ .+..++. ..| -.-+..-|+.++..
T Consensus 83 ~~~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s-~-~~~~---~a~~~~~---~~~~~~~~~v~~~~~d~~~~~~---- 147 (299)
T 3g2m_A 83 SGPVLELAAGMGRLTFPFLDL---GWEVTALELS-T-SVLA---AFRKRLA---EAPADVRDRCTLVQGDMSAFAL---- 147 (299)
T ss_dssp CSCEEEETCTTTTTHHHHHTT---TCCEEEEESC-H-HHHH---HHHHHHH---TSCHHHHTTEEEEECBTTBCCC----
T ss_pred CCcEEEEeccCCHHHHHHHHc---CCeEEEEECC-H-HHHH---HHHHHHh---hcccccccceEEEeCchhcCCc----
Confidence 459999999999999999876 3567666554 2 2222 1333332 222 12345567777542
Q ss_pred cCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEecc
Q 044601 90 RTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKE 147 (213)
Q Consensus 90 ~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~ 147 (213)
...||.||+.+.-... ....-+..+++.+..+|+ |+|.+.|+...
T Consensus 148 -~~~fD~v~~~~~~~~~-----------~~~~~~~~~l~~~~~~L~-pgG~l~~~~~~ 192 (299)
T 3g2m_A 148 -DKRFGTVVISSGSINE-----------LDEADRRGLYASVREHLE-PGGKFLLSLAM 192 (299)
T ss_dssp -SCCEEEEEECHHHHTT-----------SCHHHHHHHHHHHHHHEE-EEEEEEEEEEC
T ss_pred -CCCcCEEEECCccccc-----------CCHHHHHHHHHHHHHHcC-CCcEEEEEeec
Confidence 4789999965322221 122345688899999998 99999888643
No 60
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=96.66 E-value=0.0096 Score=48.13 Aligned_cols=108 Identities=16% Similarity=0.147 Sum_probs=71.9
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHH-----HhCCCEEEEeeeccccCCC
Q 044601 12 YSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVREL-----EERGCLVFYGVDAMQMSQH 86 (213)
Q Consensus 12 y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L-----~~~g~~V~~gVDAt~L~~~ 86 (213)
..++.+||=||=|.=.++..|++..+....+++.-.+ +.+.+ .+..|+... ....+.+ ...|++...
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s--~~~~~---~a~~~~~~~~~~~~~~~~v~~-~~~d~~~~~-- 146 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHI--KELVD---DSVNNVRKDDPTLLSSGRVQL-VVGDGRMGY-- 146 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESC--HHHHH---HHHHHHHHHCTHHHHTSSEEE-EESCGGGCC--
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCC--HHHHH---HHHHHHHhhcccccCCCcEEE-EECCcccCc--
Confidence 4568999999999988999999887644577776554 33333 244555442 2223444 345776432
Q ss_pred ccccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCC
Q 044601 87 FFLRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDP 150 (213)
Q Consensus 87 ~~l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~p 150 (213)
.....||+|+.+.|... ++..+..+|+ ++|.+.++..+..+
T Consensus 147 --~~~~~fD~i~~~~~~~~--------------------~~~~~~~~Lk-pgG~lv~~~~~~~~ 187 (226)
T 1i1n_A 147 --AEEAPYDAIHVGAAAPV--------------------VPQALIDQLK-PGGRLILPVGPAGG 187 (226)
T ss_dssp --GGGCCEEEEEECSBBSS--------------------CCHHHHHTEE-EEEEEEEEESCTTS
T ss_pred --ccCCCcCEEEECCchHH--------------------HHHHHHHhcC-CCcEEEEEEecCCC
Confidence 12467999999887522 2246778998 99999999876543
No 61
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=96.63 E-value=0.046 Score=45.32 Aligned_cols=137 Identities=17% Similarity=0.227 Sum_probs=87.7
Q ss_pred CCCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCcccc
Q 044601 11 HYSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLR 90 (213)
Q Consensus 11 ~y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~ 90 (213)
...++.+||=||=|+=.++..|++.. ++..+++.-.+ +.+.+ .+..++....-.+ ......|+..+. +.
T Consensus 34 ~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s--~~~~~---~a~~~~~~~~~~~-~~~~~~d~~~~~----~~ 102 (276)
T 3mgg_A 34 VYPPGAKVLEAGCGIGAQTVILAKNN-PDAEITSIDIS--PESLE---KARENTEKNGIKN-VKFLQANIFSLP----FE 102 (276)
T ss_dssp CCCTTCEEEETTCTTSHHHHHHHHHC-TTSEEEEEESC--HHHHH---HHHHHHHHTTCCS-EEEEECCGGGCC----SC
T ss_pred cCCCCCeEEEecCCCCHHHHHHHHhC-CCCEEEEEECC--HHHHH---HHHHHHHHcCCCC-cEEEEcccccCC----CC
Confidence 34678999999999999999999885 35677776554 22222 1333333221112 334455777654 23
Q ss_pred CCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEecc-----------------------
Q 044601 91 THKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKE----------------------- 147 (213)
Q Consensus 91 ~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~----------------------- 147 (213)
...||.|+.+....-... ...+++.+..+|+ |+|.+.++..+
T Consensus 103 ~~~fD~v~~~~~l~~~~~--------------~~~~l~~~~~~L~-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (276)
T 3mgg_A 103 DSSFDHIFVCFVLEHLQS--------------PEEALKSLKKVLK-PGGTITVIEGDHGSCYFHPEGKKAIEAWNCLIRV 167 (276)
T ss_dssp TTCEEEEEEESCGGGCSC--------------HHHHHHHHHHHEE-EEEEEEEEEECGGGCEEESCCHHHHHHHHHHHHH
T ss_pred CCCeeEEEEechhhhcCC--------------HHHHHHHHHHHcC-CCcEEEEEEcCCCCceECCCcHHHHHHHHHHHHH
Confidence 578999998864332210 1267888899998 99999887522
Q ss_pred -----CCCCCcccHHhHHHHhCcEEEEEeec
Q 044601 148 -----GDPYNKWELVKKAEKIGLTLQEVVPF 173 (213)
Q Consensus 148 -----~~py~~W~i~~lA~~~gl~l~~~~~F 173 (213)
+.++..=.+..+.+++||..++..++
T Consensus 168 ~~~~~~~~~~~~~l~~~l~~aGf~~v~~~~~ 198 (276)
T 3mgg_A 168 QAYMKGNSLVGRQIYPLLQESGFEKIRVEPR 198 (276)
T ss_dssp HHHTTCCTTGGGGHHHHHHHTTCEEEEEEEE
T ss_pred HHhcCCCcchHHHHHHHHHHCCCCeEEEeeE
Confidence 11222235667888999998887755
No 62
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=96.62 E-value=0.0048 Score=55.39 Aligned_cols=158 Identities=13% Similarity=0.074 Sum_probs=93.7
Q ss_pred ccccCC-CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhC--CCEEEEeeecccc
Q 044601 7 KWSNHY-SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEER--GCLVFYGVDAMQM 83 (213)
Q Consensus 7 k~~~~y-~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~--g~~V~~gVDAt~L 83 (213)
+|+..+ .++.+||=+|=|.=.||+.+|+. + +..|++.-.+. +.+ + .+..|++...-. .+. ...-||.+.
T Consensus 204 ~~~~~~~~~~~~VLDl~cGtG~~sl~la~~-g-a~~V~~vD~s~-~al-~---~A~~N~~~n~~~~~~v~-~~~~D~~~~ 275 (385)
T 2b78_A 204 NELINGSAAGKTVLNLFSYTAAFSVAAAMG-G-AMATTSVDLAK-RSR-A---LSLAHFEANHLDMANHQ-LVVMDVFDY 275 (385)
T ss_dssp HHHHHTTTBTCEEEEETCTTTHHHHHHHHT-T-BSEEEEEESCT-THH-H---HHHHHHHHTTCCCTTEE-EEESCHHHH
T ss_pred HHHHHHhcCCCeEEEEeeccCHHHHHHHHC-C-CCEEEEEECCH-HHH-H---HHHHHHHHcCCCccceE-EEECCHHHH
Confidence 455566 77899999988877888888864 2 34676665543 222 2 255666533211 233 445577663
Q ss_pred CCCccccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCCC--CcccHH-hHH
Q 044601 84 SQHFFLRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDPY--NKWELV-KKA 160 (213)
Q Consensus 84 ~~~~~l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py--~~W~i~-~lA 160 (213)
-........+||.||.|-|..+.. .. .+..-.+.+..++..|..+|+ |+|.++++.+..... ..|++. ..|
T Consensus 276 l~~~~~~~~~fD~Ii~DPP~~~~~-~~----~~~~~~~~~~~ll~~~~~~L~-pgG~l~~~~~~~~~~~~~~~~~i~~~~ 349 (385)
T 2b78_A 276 FKYARRHHLTYDIIIIDPPSFARN-KK----EVFSVSKDYHKLIRQGLEILS-ENGLIIASTNAANMTVSQFKKQIEKGF 349 (385)
T ss_dssp HHHHHHTTCCEEEEEECCCCC----------CCCCHHHHHHHHHHHHHHTEE-EEEEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred HHHHHHhCCCccEEEECCCCCCCC-hh----hHHHHHHHHHHHHHHHHHhcC-CCcEEEEEeCCCcCCHHHHHHHHHHHH
Confidence 221111245899999999987521 00 111223456677888999998 999999988765421 124444 356
Q ss_pred HHhCcEEEEEeecCCCCCC
Q 044601 161 EKIGLTLQEVVPFCKQDYP 179 (213)
Q Consensus 161 ~~~gl~l~~~~~F~~~~yP 179 (213)
++.|..+++ ..-.+.++|
T Consensus 350 ~~~g~~~~~-~~~~~~D~p 367 (385)
T 2b78_A 350 GKQKHTYLD-LQQLPSDFA 367 (385)
T ss_dssp TTCCCEEEE-EECCCTTSC
T ss_pred HHcCCcEEE-eCCCCCCCC
Confidence 677887444 344555666
No 63
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=96.62 E-value=0.021 Score=45.32 Aligned_cols=126 Identities=13% Similarity=0.143 Sum_probs=83.7
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCC
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTH 92 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~ 92 (213)
.+..+||=||=|.=.++..|++. + ...+++.-.+ +++.+ .+..|+....-.++. ...-|+... ...
T Consensus 59 ~~~~~vLDiG~G~G~~~~~l~~~-~-~~~v~~vD~s--~~~~~---~a~~~~~~~~~~~v~-~~~~d~~~~------~~~ 124 (205)
T 3grz_A 59 VKPLTVADVGTGSGILAIAAHKL-G-AKSVLATDIS--DESMT---AAEENAALNGIYDIA-LQKTSLLAD------VDG 124 (205)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHT-T-CSEEEEEESC--HHHHH---HHHHHHHHTTCCCCE-EEESSTTTT------CCS
T ss_pred cCCCEEEEECCCCCHHHHHHHHC-C-CCEEEEEECC--HHHHH---HHHHHHHHcCCCceE-EEecccccc------CCC
Confidence 45789999999998888888864 3 4477766554 22222 244555433322333 344555442 137
Q ss_pred cccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCCCCcccHHhHHHHhCcEEEEEee
Q 044601 93 KFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDPYNKWELVKKAEKIGLTLQEVVP 172 (213)
Q Consensus 93 ~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py~~W~i~~lA~~~gl~l~~~~~ 172 (213)
.||.|+.|.|. ..+..+++.+..+|+ ++|.+.++-... ...-.+..+.+++|+.+.+...
T Consensus 125 ~fD~i~~~~~~-----------------~~~~~~l~~~~~~L~-~gG~l~~~~~~~--~~~~~~~~~~~~~Gf~~~~~~~ 184 (205)
T 3grz_A 125 KFDLIVANILA-----------------EILLDLIPQLDSHLN-EDGQVIFSGIDY--LQLPKIEQALAENSFQIDLKMR 184 (205)
T ss_dssp CEEEEEEESCH-----------------HHHHHHGGGSGGGEE-EEEEEEEEEEEG--GGHHHHHHHHHHTTEEEEEEEE
T ss_pred CceEEEECCcH-----------------HHHHHHHHHHHHhcC-CCCEEEEEecCc--ccHHHHHHHHHHcCCceEEeec
Confidence 89999999753 124688999999998 999998863322 2455677788899999887654
No 64
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=96.62 E-value=0.018 Score=53.43 Aligned_cols=140 Identities=13% Similarity=0.068 Sum_probs=91.9
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCCc
Q 044601 14 SKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTHK 93 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~~ 93 (213)
++++||=+|=|-=+.|..||+..+....|+|.-.+ .+.+ + .+.+|++.+.-.++ .+..-|++++.... ...
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis-~~~l-~---~~~~n~~r~g~~nv-~~~~~D~~~~~~~~---~~~ 187 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFS-ASRV-K---VLHANISRCGISNV-ALTHFDGRVFGAAV---PEM 187 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSS-HHHH-H---HHHHHHHHHTCCSE-EEECCCSTTHHHHS---TTC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECC-HHHH-H---HHHHHHHHcCCCcE-EEEeCCHHHhhhhc---ccc
Confidence 67899999888888888899887545678776555 2222 2 25667665532233 34556888765322 367
Q ss_pred ccEEEEcCCcCCCccc---cc-----chHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCCC-CcccHHhHHHHh
Q 044601 94 FDRVIYNFPHVGFIFR---EN-----SYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDPY-NKWELVKKAEKI 163 (213)
Q Consensus 94 FDrIiFNFPH~G~~~~---e~-----~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py-~~W~i~~lA~~~ 163 (213)
||+|+.|=|..|.+.. .+ ....+.....+-..++.+|..+|+ ++|.+.++-|+-.|. +.-.|..+.++.
T Consensus 188 fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~Lk-pGG~LvysTcs~~~~Ene~vv~~~l~~~ 265 (479)
T 2frx_A 188 FDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALR-PGGTLVYSTCTLNQEENEAVCLWLKETY 265 (479)
T ss_dssp EEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEE-EEEEEEEEESCCSSTTTHHHHHHHHHHS
T ss_pred CCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcC-CCCEEEEecccCCcccCHHHHHHHHHHC
Confidence 9999999999885321 01 123344455667789999999998 999998887765443 334455544444
No 65
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=96.62 E-value=0.039 Score=43.78 Aligned_cols=130 Identities=15% Similarity=0.118 Sum_probs=84.6
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCC
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTH 92 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~ 92 (213)
.+..+||=||=|.=.++..|++. + .++++.-.+. ++ ++..++.... ....|+..+.. ++...
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~-~--~~~~~~D~~~--~~----------~~~~~~~~~~-~~~~d~~~~~~--~~~~~ 92 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN-G--TRVSGIEAFP--EA----------AEQAKEKLDH-VVLGDIETMDM--PYEEE 92 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT-T--CEEEEEESSH--HH----------HHHHHTTSSE-EEESCTTTCCC--CSCTT
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc-C--CeEEEEeCCH--HH----------HHHHHHhCCc-EEEcchhhcCC--CCCCC
Confidence 46789999999999999999877 3 5676665442 11 2223333233 34456665422 23357
Q ss_pred cccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccC------------------------
Q 044601 93 KFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEG------------------------ 148 (213)
Q Consensus 93 ~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~------------------------ 148 (213)
.||.|+.+...--.. + ...++..+..+|+ ++|.+.++....
T Consensus 93 ~fD~v~~~~~l~~~~-----------~---~~~~l~~~~~~L~-~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (230)
T 3cc8_A 93 QFDCVIFGDVLEHLF-----------D---PWAVIEKVKPYIK-QNGVILASIPNVSHISVLAPLLAGNWTYTEYGLLDK 157 (230)
T ss_dssp CEEEEEEESCGGGSS-----------C---HHHHHHHTGGGEE-EEEEEEEEEECTTSHHHHHHHHTTCCCCBSSSTTBT
T ss_pred ccCEEEECChhhhcC-----------C---HHHHHHHHHHHcC-CCCEEEEEeCCcchHHHHHHHhcCCceeccCCCCCc
Confidence 899999875422110 1 1378899999998 999999886331
Q ss_pred ---CCCCcccHHhHHHHhCcEEEEEeecCC
Q 044601 149 ---DPYNKWELVKKAEKIGLTLQEVVPFCK 175 (213)
Q Consensus 149 ---~py~~W~i~~lA~~~gl~l~~~~~F~~ 175 (213)
..++.-.+..+.+++||.......+..
T Consensus 158 ~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~ 187 (230)
T 3cc8_A 158 THIRFFTFNEMLRMFLKAGYSISKVDRVYV 187 (230)
T ss_dssp TCCCCCCHHHHHHHHHHTTEEEEEEEEEEC
T ss_pred ceEEEecHHHHHHHHHHcCCeEEEEEeccc
Confidence 112344567788999999988876653
No 66
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=96.60 E-value=0.0025 Score=55.98 Aligned_cols=112 Identities=21% Similarity=0.217 Sum_probs=72.2
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHH----HhCCCEEEEeeeccccCCCcc
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVREL----EERGCLVFYGVDAMQMSQHFF 88 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L----~~~g~~V~~gVDAt~L~~~~~ 88 (213)
.+..+||-||=|+=.++..|+++.+ ...+++.-.|. ++.+ -+.+|+..+ ....++++ .-|+.+.-..
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDis~--~~l~---~ar~~~~~~~~~~~~~~v~~~-~~D~~~~l~~-- 185 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKS-VENIDICEIDE--TVIE---VSKIYFKNISCGYEDKRVNVF-IEDASKFLEN-- 185 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTT-CCEEEEEESCH--HHHH---HHHHHCTTTSGGGGSTTEEEE-ESCHHHHHHH--
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCC-CCEEEEEECCH--HHHH---HHHHHHHhhccccCCCcEEEE-EccHHHHHhh--
Confidence 3568999999999999999997653 56888877763 2222 134444432 22234444 3466553111
Q ss_pred ccCCcccEEEEcCCcCCCcccccchHHHHhhHHHH-HHHHHHHHhhcccCCCeEEEEec
Q 044601 89 LRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELV-KGFLRNAKLLLKEENGEIHVTHK 146 (213)
Q Consensus 89 l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll-~~Ff~Sa~~~L~~~~G~ihvTl~ 146 (213)
...+||.||.|.|+.-.. ...|. ..|++.+..+|+ ++|.+.+...
T Consensus 186 -~~~~fDvIi~d~~~p~~~-----------~~~l~~~~~l~~~~~~Lk-pgG~lv~~~~ 231 (321)
T 2pt6_A 186 -VTNTYDVIIVDSSDPIGP-----------AETLFNQNFYEKIYNALK-PNGYCVAQCE 231 (321)
T ss_dssp -CCSCEEEEEEECCCSSSG-----------GGGGSSHHHHHHHHHHEE-EEEEEEEEEC
T ss_pred -cCCCceEEEECCcCCCCc-----------chhhhHHHHHHHHHHhcC-CCcEEEEEcC
Confidence 146799999998643211 11233 689999999998 9999888753
No 67
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=96.57 E-value=0.0027 Score=50.10 Aligned_cols=146 Identities=11% Similarity=0.032 Sum_probs=76.4
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCC
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTH 92 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~ 92 (213)
.+..+||=+|=|.=.++..|++.. ...++++.-.+.. ..+ .+..|+..... .++ +...|+.+.-........
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~--~~~---~a~~~~~~~~~-~~~-~~~~d~~~~~~~~~~~~~ 100 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALAC-PGVSVTAVDLSMD--ALA---VARRNAERFGA-VVD-WAAADGIEWLIERAERGR 100 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHC-TTEEEEEEECC--------------------------CCHHHHHHHHHHHHHTTC
T ss_pred CCCCEEEEecCCHhHHHHHHHHhC-CCCeEEEEECCHH--HHH---HHHHHHHHhCC-ceE-EEEcchHhhhhhhhhccC
Confidence 678999999999999999999885 3557777666532 222 13334433221 121 223344441100001137
Q ss_pred cccEEEEcCCcCCCcccccchHHHH------------hhHHHHHHHHHHHHhhcccCCCe-EEEEeccCCCCCcccHHhH
Q 044601 93 KFDRVIYNFPHVGFIFRENSYCQIQ------------LNKELVKGFLRNAKLLLKEENGE-IHVTHKEGDPYNKWELVKK 159 (213)
Q Consensus 93 ~FDrIiFNFPH~G~~~~e~~~~~i~------------~n~~Ll~~Ff~Sa~~~L~~~~G~-ihvTl~~~~py~~W~i~~l 159 (213)
.||.|+.|.|.............+. .....+..|++.+..+|+ ++|. +.+.+.. ...-.+..+
T Consensus 101 ~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~~---~~~~~~~~~ 176 (215)
T 4dzr_A 101 PWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLA-RGRAGVFLEVGH---NQADEVARL 176 (215)
T ss_dssp CBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBC-SSSEEEEEECTT---SCHHHHHHH
T ss_pred cccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhc-CCCeEEEEEECC---ccHHHHHHH
Confidence 8999999999765421110000111 112334889999999998 9999 6666642 222334455
Q ss_pred HH--HhCcEEEEE
Q 044601 160 AE--KIGLTLQEV 170 (213)
Q Consensus 160 A~--~~gl~l~~~ 170 (213)
.+ +.|+...+.
T Consensus 177 l~~~~~gf~~~~~ 189 (215)
T 4dzr_A 177 FAPWRERGFRVRK 189 (215)
T ss_dssp TGGGGGGTEECCE
T ss_pred HHHhhcCCceEEE
Confidence 55 677755444
No 68
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=96.56 E-value=0.0055 Score=54.86 Aligned_cols=157 Identities=20% Similarity=0.133 Sum_probs=93.3
Q ss_pred cccCCCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHh-C-CCEEEEeeeccccCC
Q 044601 8 WSNHYSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEE-R-GCLVFYGVDAMQMSQ 85 (213)
Q Consensus 8 ~~~~y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~-~-g~~V~~gVDAt~L~~ 85 (213)
++..+.++.+||=+|=|.=.||+.+|+. + ...|+|.-.+ .+.+ + .+..|++...- . ++. ...-|+.++..
T Consensus 214 ~l~~~~~~~~VLDl~cG~G~~sl~la~~-g-~~~V~~vD~s-~~al-~---~a~~n~~~ngl~~~~v~-~~~~D~~~~~~ 285 (396)
T 3c0k_A 214 ATRRYVENKRVLNCFSYTGGFAVSALMG-G-CSQVVSVDTS-QEAL-D---IARQNVELNKLDLSKAE-FVRDDVFKLLR 285 (396)
T ss_dssp HHHHHCTTCEEEEESCTTCSHHHHHHHT-T-CSEEEEEESC-HHHH-H---HHHHHHHHTTCCGGGEE-EEESCHHHHHH
T ss_pred HHHHhhCCCeEEEeeccCCHHHHHHHHC-C-CCEEEEEECC-HHHH-H---HHHHHHHHcCCCccceE-EEECCHHHHHH
Confidence 4555577899999888887888888875 3 4567766555 2222 2 25566643211 1 233 44557776532
Q ss_pred CccccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCCC-Cc-ccHH-hHHHH
Q 044601 86 HFFLRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDPY-NK-WELV-KKAEK 162 (213)
Q Consensus 86 ~~~l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py-~~-W~i~-~lA~~ 162 (213)
.......+||.||.|-|..+... . .+......+..++..+..+|+ ++|.++++.+..... +. .++. ..+.+
T Consensus 286 ~~~~~~~~fD~Ii~dpP~~~~~~-~----~~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~~~~~~~~~~~~i~~~~~~ 359 (396)
T 3c0k_A 286 TYRDRGEKFDVIVMDPPKFVENK-S----QLMGACRGYKDINMLAIQLLN-EGGILLTFSCSGLMTSDLFQKIIADAAID 359 (396)
T ss_dssp HHHHTTCCEEEEEECCSSTTTCS-S----SSSCCCTHHHHHHHHHHHTEE-EEEEEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred HHHhcCCCCCEEEECCCCCCCCh-h----HHHHHHHHHHHHHHHHHHhcC-CCcEEEEEeCCCcCCHHHHHHHHHHHHHH
Confidence 21112468999999999876421 1 122223456688888999998 999999988765432 12 2222 35667
Q ss_pred hCc--EEEEEeecCCCCCC
Q 044601 163 IGL--TLQEVVPFCKQDYP 179 (213)
Q Consensus 163 ~gl--~l~~~~~F~~~~yP 179 (213)
.|. .+.... -.+.++|
T Consensus 360 ~g~~~~~i~~~-~~~~d~p 377 (396)
T 3c0k_A 360 AGRDVQFIEQF-RQAADHP 377 (396)
T ss_dssp HTCCEEEEEEE-ECCTTSC
T ss_pred cCCeEEEEEEC-CCCCCCC
Confidence 774 444433 2344555
No 69
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=96.54 E-value=0.0077 Score=54.05 Aligned_cols=136 Identities=18% Similarity=0.129 Sum_probs=83.7
Q ss_pred CCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCC-CEE-EEeeeccccCCCccccCC
Q 044601 15 KQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERG-CLV-FYGVDAMQMSQHFFLRTH 92 (213)
Q Consensus 15 ~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g-~~V-~~gVDAt~L~~~~~l~~~ 92 (213)
..+||=+|=|.=.|+..|++.. ++..|++.-.+ +...+ .+..|++...-.+ ..| .+.-|+.+ .+...
T Consensus 223 ~~~VLDlGcG~G~~s~~la~~~-p~~~V~gvD~s--~~al~---~Ar~n~~~ngl~~~~~v~~~~~D~~~-----~~~~~ 291 (375)
T 4dcm_A 223 EGEIVDLGCGNGVIGLTLLDKN-PQAKVVFVDES--PMAVA---SSRLNVETNMPEALDRCEFMINNALS-----GVEPF 291 (375)
T ss_dssp CSEEEEETCTTCHHHHHHHHHC-TTCEEEEEESC--HHHHH---HHHHHHHHHCGGGGGGEEEEECSTTT-----TCCTT
T ss_pred CCeEEEEeCcchHHHHHHHHHC-CCCEEEEEECc--HHHHH---HHHHHHHHcCCCcCceEEEEechhhc-----cCCCC
Confidence 4799999999999999999886 35677776554 22333 2555655432110 122 23345444 22357
Q ss_pred cccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCCCCcc------cHHhHHHHhCcE
Q 044601 93 KFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDPYNKW------ELVKKAEKIGLT 166 (213)
Q Consensus 93 ~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py~~W------~i~~lA~~~gl~ 166 (213)
+||.|+.|.|.-.+.. ....+...||+.+..+|+ ++|.+.|......+|..| +++.+++..||+
T Consensus 292 ~fD~Ii~nppfh~~~~---------~~~~~~~~~l~~~~~~Lk-pgG~l~iv~n~~~~~~~~l~~~fg~~~~~a~~~~F~ 361 (375)
T 4dcm_A 292 RFNAVLCNPPFHQQHA---------LTDNVAWEMFHHARRCLK-INGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFV 361 (375)
T ss_dssp CEEEEEECCCC----------------CCHHHHHHHHHHHHEE-EEEEEEEEEETTSCHHHHHHHHHSCCEEEEECSSEE
T ss_pred CeeEEEECCCcccCcc---------cCHHHHHHHHHHHHHhCC-CCcEEEEEEECCcCHHHHHHHhcCCEEEEeeCCCEE
Confidence 8999999999543211 111234478999999998 999999976655555432 344455666777
Q ss_pred EEEEe
Q 044601 167 LQEVV 171 (213)
Q Consensus 167 l~~~~ 171 (213)
+.+..
T Consensus 362 V~~~~ 366 (375)
T 4dcm_A 362 VLKAV 366 (375)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 66654
No 70
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=96.54 E-value=0.0079 Score=50.69 Aligned_cols=150 Identities=14% Similarity=0.140 Sum_probs=84.5
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCC---EEEEeeeccccCCC---
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGC---LVFYGVDAMQMSQH--- 86 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~---~V~~gVDAt~L~~~--- 86 (213)
.+..+||=+|=|.=.+++.|++... ...|++.-.+ +++.+ -+..|++.+...|. .-++..|+.++...
T Consensus 35 ~~~~~VLDlG~G~G~~~l~la~~~~-~~~v~gvDi~--~~~~~---~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~ 108 (260)
T 2ozv_A 35 DRACRIADLGAGAGAAGMAVAARLE-KAEVTLYERS--QEMAE---FARRSLELPDNAAFSARIEVLEADVTLRAKARVE 108 (260)
T ss_dssp CSCEEEEECCSSSSHHHHHHHHHCT-TEEEEEEESS--HHHHH---HHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHH
T ss_pred cCCCEEEEeCChHhHHHHHHHHhCC-CCeEEEEECC--HHHHH---HHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhh
Confidence 4568999999999999999998863 4577776655 33332 25566654322332 23455688776211
Q ss_pred ccccCCcccEEEEcCCcCCCcccc--cchHHHHhh--HHHHHHHHHHHHhhcccCCCeEEEEeccCCCCCcccHHhHHHH
Q 044601 87 FFLRTHKFDRVIYNFPHVGFIFRE--NSYCQIQLN--KELVKGFLRNAKLLLKEENGEIHVTHKEGDPYNKWELVKKAEK 162 (213)
Q Consensus 87 ~~l~~~~FDrIiFNFPH~G~~~~e--~~~~~i~~n--~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py~~W~i~~lA~~ 162 (213)
..+...+||.|+.|-|.....+.. +..+.+..+ ...+..|++.+..+|+ ++|.+.+.+... ..-.+..+.++
T Consensus 109 ~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~~---~~~~~~~~l~~ 184 (260)
T 2ozv_A 109 AGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMV-SGGQLSLISRPQ---SVAEIIAACGS 184 (260)
T ss_dssp TTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEE-EEEEEEEEECGG---GHHHHHHHHTT
T ss_pred hccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcC-CCCEEEEEEcHH---HHHHHHHHHHh
Confidence 012357899999998876532111 111111111 1126789999999998 999998876322 22224444444
Q ss_pred hCcEEEEEeec
Q 044601 163 IGLTLQEVVPF 173 (213)
Q Consensus 163 ~gl~l~~~~~F 173 (213)
. +...+..+.
T Consensus 185 ~-~~~~~i~~v 194 (260)
T 2ozv_A 185 R-FGGLEITLI 194 (260)
T ss_dssp T-EEEEEEEEE
T ss_pred c-CCceEEEEE
Confidence 3 555555443
No 71
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=96.53 E-value=0.028 Score=46.04 Aligned_cols=134 Identities=14% Similarity=0.182 Sum_probs=83.7
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccC
Q 044601 12 YSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRT 91 (213)
Q Consensus 12 y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~ 91 (213)
..++.+||=||=|.=.++..|++.. ..+++.-.+ +++.+ .+..++....-.++.+ ...|+..+. +..
T Consensus 19 ~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s--~~~~~---~a~~~~~~~~~~~v~~-~~~d~~~~~----~~~ 85 (239)
T 1xxl_A 19 CRAEHRVLDIGAGAGHTALAFSPYV---QECIGVDAT--KEMVE---VASSFAQEKGVENVRF-QQGTAESLP----FPD 85 (239)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGGS---SEEEEEESC--HHHHH---HHHHHHHHHTCCSEEE-EECBTTBCC----SCT
T ss_pred cCCCCEEEEEccCcCHHHHHHHHhC---CEEEEEECC--HHHHH---HHHHHHHHcCCCCeEE-EecccccCC----CCC
Confidence 3567899999999988999998764 266655443 33332 1344443322123433 345776653 345
Q ss_pred CcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccC----------------------C
Q 044601 92 HKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEG----------------------D 149 (213)
Q Consensus 92 ~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~----------------------~ 149 (213)
..||.|+.++.---.. + ...++..+..+|+ |+|.+.++-... .
T Consensus 86 ~~fD~v~~~~~l~~~~---~-----------~~~~l~~~~~~Lk-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (239)
T 1xxl_A 86 DSFDIITCRYAAHHFS---D-----------VRKAVREVARVLK-QDGRFLLVDHYAPEDPVLDEFVNHLNRLRDPSHVR 150 (239)
T ss_dssp TCEEEEEEESCGGGCS---C-----------HHHHHHHHHHHEE-EEEEEEEEEECBCSSHHHHHHHHHHHHHHCTTCCC
T ss_pred CcEEEEEECCchhhcc---C-----------HHHHHHHHHHHcC-CCcEEEEEEcCCCCChhHHHHHHHHHHhccccccC
Confidence 7899999986432211 0 2467888999998 999988864321 1
Q ss_pred CCCcccHHhHHHHhCcEEEEEeec
Q 044601 150 PYNKWELVKKAEKIGLTLQEVVPF 173 (213)
Q Consensus 150 py~~W~i~~lA~~~gl~l~~~~~F 173 (213)
.++.-.+..+.+++||.......+
T Consensus 151 ~~~~~~~~~ll~~aGf~~~~~~~~ 174 (239)
T 1xxl_A 151 ESSLSEWQAMFSANQLAYQDIQKW 174 (239)
T ss_dssp CCBHHHHHHHHHHTTEEEEEEEEE
T ss_pred CCCHHHHHHHHHHCCCcEEEEEee
Confidence 122234556778899998877665
No 72
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=96.52 E-value=0.022 Score=45.46 Aligned_cols=106 Identities=19% Similarity=0.221 Sum_probs=69.9
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccC
Q 044601 12 YSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRT 91 (213)
Q Consensus 12 y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~ 91 (213)
.....+||=||=|.=.++..|++.. + .+++.-.+ +++.+ .+..++.... .++.++ ..|+.++. +..
T Consensus 36 ~~~~~~vLDlG~G~G~~~~~l~~~~--~-~v~~vD~s--~~~~~---~a~~~~~~~~-~~~~~~-~~d~~~~~----~~~ 101 (227)
T 1ve3_A 36 MKKRGKVLDLACGVGGFSFLLEDYG--F-EVVGVDIS--EDMIR---KAREYAKSRE-SNVEFI-VGDARKLS----FED 101 (227)
T ss_dssp CCSCCEEEEETCTTSHHHHHHHHTT--C-EEEEEESC--HHHHH---HHHHHHHHTT-CCCEEE-ECCTTSCC----SCT
T ss_pred cCCCCeEEEEeccCCHHHHHHHHcC--C-EEEEEECC--HHHHH---HHHHHHHhcC-CCceEE-ECchhcCC----CCC
Confidence 3457899999999989999888763 2 67666554 33333 1444443322 345443 44776653 235
Q ss_pred CcccEEEEcCC--cCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEec
Q 044601 92 HKFDRVIYNFP--HVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHK 146 (213)
Q Consensus 92 ~~FDrIiFNFP--H~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~ 146 (213)
..||.|+.+.| +... .-...+++.+..+|+ ++|.+.|...
T Consensus 102 ~~~D~v~~~~~~~~~~~--------------~~~~~~l~~~~~~L~-~gG~l~~~~~ 143 (227)
T 1ve3_A 102 KTFDYVIFIDSIVHFEP--------------LELNQVFKEVRRVLK-PSGKFIMYFT 143 (227)
T ss_dssp TCEEEEEEESCGGGCCH--------------HHHHHHHHHHHHHEE-EEEEEEEEEE
T ss_pred CcEEEEEEcCchHhCCH--------------HHHHHHHHHHHHHcC-CCcEEEEEec
Confidence 68999999987 4321 113568899999998 9999888754
No 73
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=96.51 E-value=0.019 Score=46.16 Aligned_cols=131 Identities=14% Similarity=0.222 Sum_probs=84.4
Q ss_pred cccCCCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCc
Q 044601 8 WSNHYSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHF 87 (213)
Q Consensus 8 ~~~~y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~ 87 (213)
.+.++.+..+||=||=|.=.++..|++.. .++++.-.+ . ++.+ .+..+.. . ++.++ ..|+..+ .
T Consensus 36 ~l~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s-~-~~~~---~a~~~~~---~-~v~~~-~~d~~~~---~ 99 (250)
T 2p7i_A 36 AFTPFFRPGNLLELGSFKGDFTSRLQEHF---NDITCVEAS-E-EAIS---HAQGRLK---D-GITYI-HSRFEDA---Q 99 (250)
T ss_dssp HHGGGCCSSCEEEESCTTSHHHHHHTTTC---SCEEEEESC-H-HHHH---HHHHHSC---S-CEEEE-ESCGGGC---C
T ss_pred HHHhhcCCCcEEEECCCCCHHHHHHHHhC---CcEEEEeCC-H-HHHH---HHHHhhh---C-CeEEE-EccHHHc---C
Confidence 34556678899999999888888888763 366665443 2 2221 1221111 1 44443 4477766 1
Q ss_pred cccCCcccEEEEcCC--cCCCcccccchHHHHhhHHHHHHHHHHHH-hhcccCCCeEEEEeccCC---------------
Q 044601 88 FLRTHKFDRVIYNFP--HVGFIFRENSYCQIQLNKELVKGFLRNAK-LLLKEENGEIHVTHKEGD--------------- 149 (213)
Q Consensus 88 ~l~~~~FDrIiFNFP--H~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~-~~L~~~~G~ihvTl~~~~--------------- 149 (213)
....||.|+.++- |+. + ...+++.+. .+|+ |+|.+.|+.....
T Consensus 100 --~~~~fD~v~~~~~l~~~~-------------~---~~~~l~~~~~~~Lk-pgG~l~i~~~~~~~~~~~~~~~~~~~~~ 160 (250)
T 2p7i_A 100 --LPRRYDNIVLTHVLEHID-------------D---PVALLKRINDDWLA-EGGRLFLVCPNANAVSRQIAVKMGIISH 160 (250)
T ss_dssp --CSSCEEEEEEESCGGGCS-------------S---HHHHHHHHHHTTEE-EEEEEEEEEECTTCHHHHHHHHTTSSSS
T ss_pred --cCCcccEEEEhhHHHhhc-------------C---HHHHHHHHHHHhcC-CCCEEEEEcCChHHHHHHHHHHcCcccc
Confidence 2578999998762 221 1 137888899 9998 9999999874321
Q ss_pred ---------------CCCcccHHhHHHHhCcEEEEEeec
Q 044601 150 ---------------PYNKWELVKKAEKIGLTLQEVVPF 173 (213)
Q Consensus 150 ---------------py~~W~i~~lA~~~gl~l~~~~~F 173 (213)
+++.-.+..+.+++||.+++...+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 199 (250)
T 2p7i_A 161 NSAVTEAEFAHGHRCTYALDTLERDASRAGLQVTYRSGI 199 (250)
T ss_dssp TTCCCHHHHHTTCCCCCCHHHHHHHHHHTTCEEEEEEEE
T ss_pred chhcccccccccccccCCHHHHHHHHHHCCCeEEEEeee
Confidence 123336677889999999888765
No 74
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=96.51 E-value=0.0028 Score=54.49 Aligned_cols=111 Identities=20% Similarity=0.199 Sum_probs=71.9
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHH----HhCCCEEEEeeeccccCCCcc
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVREL----EERGCLVFYGVDAMQMSQHFF 88 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L----~~~g~~V~~gVDAt~L~~~~~ 88 (213)
.+..+||.||=|+=+.+..|+++. +..++++.-.|.. +.+ -+.+++..+ ....++++ .-|+.+.-..
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~--~i~---~a~~~~~~~~~~~~~~~v~~~-~~D~~~~l~~-- 147 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYK-SVENIDICEIDET--VIE---VSKIYFKNISCGYEDKRVNVF-IEDASKFLEN-- 147 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCT-TCCEEEEEESCHH--HHH---HHHHHCTTTSGGGGSTTEEEE-ESCHHHHHHH--
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcC-CCCEEEEEECCHH--HHH---HHHHHhHHhccccCCCcEEEE-ECChHHHHHh--
Confidence 356899999999999999999764 3568888777732 222 133333222 22334443 4477653211
Q ss_pred ccCCcccEEEEcCCcCCCcccccchHHHHhhHHHH-HHHHHHHHhhcccCCCeEEEEe
Q 044601 89 LRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELV-KGFLRNAKLLLKEENGEIHVTH 145 (213)
Q Consensus 89 l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll-~~Ff~Sa~~~L~~~~G~ihvTl 145 (213)
...+||.||.+.|..-+. ...|. ..||+.+..+|+ ++|.+.+..
T Consensus 148 -~~~~fD~Ii~d~~~~~~~-----------~~~l~~~~~l~~~~~~L~-pgG~lv~~~ 192 (283)
T 2i7c_A 148 -VTNTYDVIIVDSSDPIGP-----------AETLFNQNFYEKIYNALK-PNGYCVAQC 192 (283)
T ss_dssp -CCSCEEEEEEECCCTTTG-----------GGGGSSHHHHHHHHHHEE-EEEEEEEEC
T ss_pred -CCCCceEEEEcCCCCCCc-----------chhhhHHHHHHHHHHhcC-CCcEEEEEC
Confidence 146799999987754321 11233 689999999998 999987764
No 75
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=96.50 E-value=0.019 Score=46.85 Aligned_cols=133 Identities=15% Similarity=0.124 Sum_probs=83.7
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCCc
Q 044601 14 SKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTHK 93 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~~ 93 (213)
+..+||=||=|.=.++..|++.. ...+++.-.+ . ++.+ .+..++.......+ -+...|+..+. .....
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s-~-~~~~---~a~~~~~~~~~~~~-~~~~~d~~~~~----~~~~~ 146 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL--FREVDMVDIT-E-DFLV---QAKTYLGEEGKRVR-NYFCCGLQDFT----PEPDS 146 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT--CSEEEEEESC-H-HHHH---HHHHHTGGGGGGEE-EEEECCGGGCC----CCSSC
T ss_pred CCCEEEEECCCCCHHHHHHHHhc--CCEEEEEeCC-H-HHHH---HHHHHhhhcCCceE-EEEEcChhhcC----CCCCC
Confidence 47899999999999999988775 4567666544 2 2222 13333222111112 24556776654 23468
Q ss_pred ccEEEEcCC--cCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCC-------CC-----CcccHHhH
Q 044601 94 FDRVIYNFP--HVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGD-------PY-----NKWELVKK 159 (213)
Q Consensus 94 FDrIiFNFP--H~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~-------py-----~~W~i~~l 159 (213)
||.|+.++. |+. ..-+..+++.+..+|+ ++|.+.|+-.... .. +.=.+..+
T Consensus 147 fD~v~~~~~l~~~~--------------~~~~~~~l~~~~~~Lk-pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (241)
T 2ex4_A 147 YDVIWIQWVIGHLT--------------DQHLAEFLRRCKGSLR-PNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRI 211 (241)
T ss_dssp EEEEEEESCGGGSC--------------HHHHHHHHHHHHHHEE-EEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHH
T ss_pred EEEEEEcchhhhCC--------------HHHHHHHHHHHHHhcC-CCeEEEEEEccCCCcceecccCCcccCCHHHHHHH
Confidence 999999843 322 1234678999999998 9999888543211 01 22356678
Q ss_pred HHHhCcEEEEEeec
Q 044601 160 AEKIGLTLQEVVPF 173 (213)
Q Consensus 160 A~~~gl~l~~~~~F 173 (213)
.+++||.+++....
T Consensus 212 l~~aGf~~~~~~~~ 225 (241)
T 2ex4_A 212 ICSAGLSLLAEERQ 225 (241)
T ss_dssp HHHTTCCEEEEEEC
T ss_pred HHHcCCeEEEeeec
Confidence 88999999888765
No 76
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=96.47 E-value=0.04 Score=43.28 Aligned_cols=113 Identities=16% Similarity=0.045 Sum_probs=72.8
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCC
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTH 92 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~ 92 (213)
.++.+||=+|=|.=.++..+++. + ...|+|.-.+ +++.+ .+..|++...-..+ -+..-|+.++.... ...
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~-~-~~~v~~vD~~--~~~~~---~a~~~~~~~~~~~v-~~~~~d~~~~~~~~--~~~ 112 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSR-G-AASVLFVESD--QRSAA---VIARNIEALGLSGA-TLRRGAVAAVVAAG--TTS 112 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT-T-CSEEEEEECC--HHHHH---HHHHHHHHHTCSCE-EEEESCHHHHHHHC--CSS
T ss_pred CCCCEEEEeCCCcCHHHHHHHHC-C-CCeEEEEECC--HHHHH---HHHHHHHHcCCCce-EEEEccHHHHHhhc--cCC
Confidence 46789999988887888877663 2 4467766555 33333 25566655433223 34566777764322 257
Q ss_pred cccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHh--hcccCCCeEEEEeccCC
Q 044601 93 KFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKL--LLKEENGEIHVTHKEGD 149 (213)
Q Consensus 93 ~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~--~L~~~~G~ihvTl~~~~ 149 (213)
.||.|+.|.|.... ...+..++..+.. +|+ |+|.+.|......
T Consensus 113 ~fD~i~~~~p~~~~-------------~~~~~~~l~~~~~~~~L~-pgG~l~~~~~~~~ 157 (189)
T 3p9n_A 113 PVDLVLADPPYNVD-------------SADVDAILAALGTNGWTR-EGTVAVVERATTC 157 (189)
T ss_dssp CCSEEEECCCTTSC-------------HHHHHHHHHHHHHSSSCC-TTCEEEEEEETTS
T ss_pred CccEEEECCCCCcc-------------hhhHHHHHHHHHhcCccC-CCeEEEEEecCCC
Confidence 89999999995442 1334456666666 998 9999999876543
No 77
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=96.46 E-value=0.0048 Score=53.80 Aligned_cols=114 Identities=18% Similarity=0.179 Sum_probs=74.1
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHH-----hCCCEEEEeeeccccCCCc
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELE-----ERGCLVFYGVDAMQMSQHF 87 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~-----~~g~~V~~gVDAt~L~~~~ 87 (213)
.+..+||.||=|+=.++..|+++.+ ..+|++.-.|. ++.+ -+.+++..+. ...++++ .-|+.+.-..
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~--~~i~---~ar~~~~~~~~~~~~~~~v~~~-~~D~~~~l~~- 147 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPT-VEKAVMVDIDG--ELVE---VAKRHMPEWHQGAFDDPRAVLV-IDDARAYLER- 147 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTT-CCEEEEEESCH--HHHH---HHHHHCHHHHTTGGGCTTEEEE-ESCHHHHHHH-
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCC-CCEEEEEECCH--HHHH---HHHHHhHhhccccccCCceEEE-EchHHHHHHh-
Confidence 3568999999999999999998753 56788877763 2332 1445555432 2245544 4477663111
Q ss_pred cccCCcccEEEEcCCcCCCcccccchHHHHhhHHH-HHHHHHHHHhhcccCCCeEEEEe
Q 044601 88 FLRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKEL-VKGFLRNAKLLLKEENGEIHVTH 145 (213)
Q Consensus 88 ~l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~L-l~~Ff~Sa~~~L~~~~G~ihvTl 145 (213)
...+||.||.+.|....... ....| ...||+.+..+|+ ++|.+.+..
T Consensus 148 --~~~~fD~Ii~d~~~~~~~~~--------~~~~l~~~~~l~~~~~~Lk-pgG~lv~~~ 195 (314)
T 1uir_A 148 --TEERYDVVIIDLTDPVGEDN--------PARLLYTVEFYRLVKAHLN-PGGVMGMQT 195 (314)
T ss_dssp --CCCCEEEEEEECCCCBSTTC--------GGGGGSSHHHHHHHHHTEE-EEEEEEEEE
T ss_pred --cCCCccEEEECCCCcccccC--------cchhccHHHHHHHHHHhcC-CCcEEEEEc
Confidence 24679999999886331000 01122 4689999999998 999988864
No 78
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=96.45 E-value=0.0028 Score=55.68 Aligned_cols=111 Identities=14% Similarity=0.198 Sum_probs=67.7
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHH----HhCCCEEEEeeeccccCCCcc
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVREL----EERGCLVFYGVDAMQMSQHFF 88 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L----~~~g~~V~~gVDAt~L~~~~~ 88 (213)
.+..+||.||=|+=..+..|+++. +...|++.-.|. ++.+ -+.+++..+ ....+++ +.-||.+.-..
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~-~~~~v~~vDid~--~~i~---~Ar~~~~~~~~~~~~~rv~~-~~~D~~~~l~~-- 177 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHE-SVEKVTMCEIDE--MVID---VAKKFLPGMSCGFSHPKLDL-FCGDGFEFLKN-- 177 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCT-TCCEEEEECSCH--HHHH---HHHHHCTTTSGGGGCTTEEE-ECSCHHHHHHH--
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcC-CCCEEEEEECCH--HHHH---HHHHHHHHhccccCCCCEEE-EEChHHHHHHh--
Confidence 356899999999999999999865 356788777763 2222 133344322 1223444 44577652111
Q ss_pred ccCCcccEEEEcCCcCCCcccccchHHHHhhHHHH-HHHHHHHHhhcccCCCeEEEEe
Q 044601 89 LRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELV-KGFLRNAKLLLKEENGEIHVTH 145 (213)
Q Consensus 89 l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll-~~Ff~Sa~~~L~~~~G~ihvTl 145 (213)
...+||.||.|.|+.-. ....|. ..||+.+..+|+ |+|.+.+..
T Consensus 178 -~~~~fD~Ii~d~~~~~~-----------~~~~l~t~~~l~~~~~~Lk-pgG~lv~~~ 222 (314)
T 2b2c_A 178 -HKNEFDVIITDSSDPVG-----------PAESLFGQSYYELLRDALK-EDGILSSQG 222 (314)
T ss_dssp -CTTCEEEEEECCC------------------------HHHHHHHHEE-EEEEEEEEC
T ss_pred -cCCCceEEEEcCCCCCC-----------cchhhhHHHHHHHHHhhcC-CCeEEEEEC
Confidence 24679999999875421 112344 789999999998 999988765
No 79
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=96.43 E-value=0.1 Score=43.06 Aligned_cols=140 Identities=15% Similarity=0.055 Sum_probs=84.5
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHH----HHHhhcchHHHHHHHHHhCC----CEEEEeeecccc
Q 044601 12 YSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQE----TIANKYSNAVDNVRELEERG----CLVFYGVDAMQM 83 (213)
Q Consensus 12 y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~----~l~~kY~~a~~ni~~L~~~g----~~V~~gVDAt~L 83 (213)
..++.+||=||=|.=.++..|++..++...+++.-.+... +..+ .+..++ +..| +.++ ..| .-.
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~---~a~~~~---~~~~~~~~v~~~-~~d-~~~ 112 (275)
T 3bkx_A 41 VKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLG---QAWNHL---LAGPLGDRLTVH-FNT-NLS 112 (275)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHH---HHHHHH---HTSTTGGGEEEE-CSC-CTT
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHH---HHHHHH---HhcCCCCceEEE-ECC-hhh
Confidence 3567899999999999999999988655688887776420 0111 133333 2332 3333 334 111
Q ss_pred CCCccccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCC--------------
Q 044601 84 SQHFFLRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGD-------------- 149 (213)
Q Consensus 84 ~~~~~l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~-------------- 149 (213)
....++....||.|+.+.+.--... . ..+++.++.+++ ++|.+.++-....
T Consensus 113 ~~~~~~~~~~fD~v~~~~~l~~~~~-----------~---~~~~~~~~~l~~-~gG~l~~~~~~~~~~~~~~~~~~~~~~ 177 (275)
T 3bkx_A 113 DDLGPIADQHFDRVVLAHSLWYFAS-----------A---NALALLFKNMAA-VCDHVDVAEWSMQPTALDQIGHLQAAM 177 (275)
T ss_dssp TCCGGGTTCCCSEEEEESCGGGSSC-----------H---HHHHHHHHHHTT-TCSEEEEEEECSSCSSGGGHHHHHHHH
T ss_pred hccCCCCCCCEEEEEEccchhhCCC-----------H---HHHHHHHHHHhC-CCCEEEEEEecCCCCchhhhhHHHHHH
Confidence 1122334578999999876422210 0 135666677776 8999888632210
Q ss_pred ------------CCCcc------cHHhHHHHhCcEEEEEeecC
Q 044601 150 ------------PYNKW------ELVKKAEKIGLTLQEVVPFC 174 (213)
Q Consensus 150 ------------py~~W------~i~~lA~~~gl~l~~~~~F~ 174 (213)
+...| .+..+.+++||.+.+...+.
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~s~~~l~~~l~~aGf~~~~~~~~~ 220 (275)
T 3bkx_A 178 IQGLLYAIAPSDVANIRTLITPDTLAQIAHDNTWTYTAGTIVE 220 (275)
T ss_dssp HHHHHHHHSCCTTCSCCCCCCHHHHHHHHHHHTCEEEECCCBC
T ss_pred HHHHHhhccccccccccccCCHHHHHHHHHHCCCeeEEEEEec
Confidence 11112 56678889999999998883
No 80
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=96.42 E-value=0.17 Score=42.58 Aligned_cols=137 Identities=12% Similarity=0.135 Sum_probs=85.5
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHh-CCCEEEEeeeccccCCCcccc
Q 044601 12 YSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEE-RGCLVFYGVDAMQMSQHFFLR 90 (213)
Q Consensus 12 y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~-~g~~V~~gVDAt~L~~~~~l~ 90 (213)
..++++||=+|=|.=.++..||+..++...|+|.=+... .+.. . ++..++ .++.++ --||+.+.....+
T Consensus 74 l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~-~l~~----l---~~~a~~r~nv~~i-~~Da~~~~~~~~~- 143 (232)
T 3id6_C 74 IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPR-VVRE----L---LLVAQRRPNIFPL-LADARFPQSYKSV- 143 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHH-HHHH----H---HHHHHHCTTEEEE-ECCTTCGGGTTTT-
T ss_pred CCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHH-HHHH----H---HHHhhhcCCeEEE-Ecccccchhhhcc-
Confidence 457899999999988899999998876668887655432 1111 0 111112 244443 4688876432222
Q ss_pred CCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCC------CCCcc-cHHhHHHHh
Q 044601 91 THKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGD------PYNKW-ELVKKAEKI 163 (213)
Q Consensus 91 ~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~------py~~W-~i~~lA~~~ 163 (213)
..+||+|+-|.|+.. .. .-+...+..+|+ ++|.+.++++.+. |...- +++...+++
T Consensus 144 ~~~~D~I~~d~a~~~-------------~~---~il~~~~~~~Lk-pGG~lvisik~~~~d~t~~~~e~~~~~~~~L~~~ 206 (232)
T 3id6_C 144 VENVDVLYVDIAQPD-------------QT---DIAIYNAKFFLK-VNGDMLLVIKARSIDVTKDPKEIYKTEVEKLENS 206 (232)
T ss_dssp CCCEEEEEECCCCTT-------------HH---HHHHHHHHHHEE-EEEEEEEEEC-------CCSSSSTTHHHHHHHHT
T ss_pred ccceEEEEecCCChh-------------HH---HHHHHHHHHhCC-CCeEEEEEEccCCcccCCCHHHHHHHHHHHHHHC
Confidence 357999999988621 11 123455677898 9999999876432 32222 334455567
Q ss_pred CcEEEEEeecCC
Q 044601 164 GLTLQEVVPFCK 175 (213)
Q Consensus 164 gl~l~~~~~F~~ 175 (213)
||.+.+.....|
T Consensus 207 gf~~~~~~~l~p 218 (232)
T 3id6_C 207 NFETIQIINLDP 218 (232)
T ss_dssp TEEEEEEEECTT
T ss_pred CCEEEEEeccCC
Confidence 999999887765
No 81
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=96.41 E-value=0.085 Score=42.45 Aligned_cols=110 Identities=15% Similarity=0.178 Sum_probs=70.4
Q ss_pred ccCCCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCcc
Q 044601 9 SNHYSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFF 88 (213)
Q Consensus 9 ~~~y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~ 88 (213)
+....+..+||=||=|.=.++..|++.+ ++..+++.-.+ . ++.+. +..+ ++..+-.-....|+.++..
T Consensus 39 ~~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s-~-~~~~~---a~~~---~~~~~~~~~~~~d~~~~~~--- 106 (234)
T 3dtn_A 39 ASVDTENPDILDLGAGTGLLSAFLMEKY-PEATFTLVDMS-E-KMLEI---AKNR---FRGNLKVKYIEADYSKYDF--- 106 (234)
T ss_dssp CCCSCSSCEEEEETCTTSHHHHHHHHHC-TTCEEEEEESC-H-HHHHH---HHHH---TCSCTTEEEEESCTTTCCC---
T ss_pred hhcCCCCCeEEEecCCCCHHHHHHHHhC-CCCeEEEEECC-H-HHHHH---HHHh---hccCCCEEEEeCchhccCC---
Confidence 3445567999999999999999999887 35677766554 2 22221 2222 2223323344557776542
Q ss_pred ccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEe
Q 044601 89 LRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTH 145 (213)
Q Consensus 89 l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl 145 (213)
. ..||.|+.+++.--. ...-...+++.+..+|+ |+|.+.|+-
T Consensus 107 -~-~~fD~v~~~~~l~~~------------~~~~~~~~l~~~~~~Lk-pgG~l~~~~ 148 (234)
T 3dtn_A 107 -E-EKYDMVVSALSIHHL------------EDEDKKELYKRSYSILK-ESGIFINAD 148 (234)
T ss_dssp -C-SCEEEEEEESCGGGS------------CHHHHHHHHHHHHHHEE-EEEEEEEEE
T ss_pred -C-CCceEEEEeCccccC------------CHHHHHHHHHHHHHhcC-CCcEEEEEE
Confidence 2 789999998643222 11223467888899998 999988875
No 82
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=96.41 E-value=0.026 Score=46.54 Aligned_cols=132 Identities=24% Similarity=0.332 Sum_probs=81.2
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCC--EEEEeeeccccCCCcccc
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGC--LVFYGVDAMQMSQHFFLR 90 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~--~V~~gVDAt~L~~~~~l~ 90 (213)
.+..+||=||=|.=.++..|++.. ..+++ .|..+++.+. +..++ ++.|. .-....|+..+. +.
T Consensus 36 ~~~~~vLDiGcG~G~~~~~l~~~~---~~v~g--vD~s~~~l~~---a~~~~---~~~~~~~v~~~~~d~~~l~----~~ 100 (260)
T 1vl5_A 36 KGNEEVLDVATGGGHVANAFAPFV---KKVVA--FDLTEDILKV---ARAFI---EGNGHQQVEYVQGDAEQMP----FT 100 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHGGGS---SEEEE--EESCHHHHHH---HHHHH---HHTTCCSEEEEECCC-CCC----SC
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhC---CEEEE--EeCCHHHHHH---HHHHH---HhcCCCceEEEEecHHhCC----CC
Confidence 467899999999888899998774 25555 4532333331 33333 23332 223455777653 34
Q ss_pred CCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccC----------------------
Q 044601 91 THKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEG---------------------- 148 (213)
Q Consensus 91 ~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~---------------------- 148 (213)
...||.|+.++.---.. + ...+|+.+..+|+ |+|.+.++-...
T Consensus 101 ~~~fD~V~~~~~l~~~~---d-----------~~~~l~~~~r~Lk-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (260)
T 1vl5_A 101 DERFHIVTCRIAAHHFP---N-----------PASFVSEAYRVLK-KGGQLLLVDNSAPENDAFDVFYNYVEKERDYSHH 165 (260)
T ss_dssp TTCEEEEEEESCGGGCS---C-----------HHHHHHHHHHHEE-EEEEEEEEEEEBCSSHHHHHHHHHHHHHHCTTCC
T ss_pred CCCEEEEEEhhhhHhcC---C-----------HHHHHHHHHHHcC-CCCEEEEEEcCCCCCHHHHHHHHHHHHhcCcccc
Confidence 57899999986422210 0 1368888999998 999998863211
Q ss_pred CCCCcccHHhHHHHhCcEEEEEeecC
Q 044601 149 DPYNKWELVKKAEKIGLTLQEVVPFC 174 (213)
Q Consensus 149 ~py~~W~i~~lA~~~gl~l~~~~~F~ 174 (213)
..++.-.+..+.+++||.+.....+.
T Consensus 166 ~~~~~~~~~~~l~~aGf~~~~~~~~~ 191 (260)
T 1vl5_A 166 RAWKKSDWLKMLEEAGFELEELHCFH 191 (260)
T ss_dssp CCCBHHHHHHHHHHHTCEEEEEEEEE
T ss_pred CCCCHHHHHHHHHHCCCeEEEEEEee
Confidence 11222345667888999987776653
No 83
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=96.35 E-value=0.013 Score=52.27 Aligned_cols=147 Identities=16% Similarity=0.104 Sum_probs=91.6
Q ss_pred cccCCC-CCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhC-CCEEEEeeeccccCC
Q 044601 8 WSNHYS-SKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEER-GCLVFYGVDAMQMSQ 85 (213)
Q Consensus 8 ~~~~y~-~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~-g~~V~~gVDAt~L~~ 85 (213)
++..+. ++.+||=+|=|.=.||+.||+. + ...++|.-.+ .+.+ + .+..|++...-. ++. ...-|+.++..
T Consensus 210 ~~~~~~~~~~~VLDl~~G~G~~~~~la~~-g-~~~v~~vD~s-~~~l-~---~a~~n~~~n~~~~~v~-~~~~d~~~~~~ 281 (396)
T 2as0_A 210 ALEKWVQPGDRVLDVFTYTGGFAIHAAIA-G-ADEVIGIDKS-PRAI-E---TAKENAKLNGVEDRMK-FIVGSAFEEME 281 (396)
T ss_dssp HHGGGCCTTCEEEETTCTTTHHHHHHHHT-T-CSEEEEEESC-HHHH-H---HHHHHHHHTTCGGGEE-EEESCHHHHHH
T ss_pred HHHHHhhCCCeEEEecCCCCHHHHHHHHC-C-CCEEEEEeCC-HHHH-H---HHHHHHHHcCCCccce-EEECCHHHHHH
Confidence 344445 7889999998888899999876 3 4577776665 2222 2 255565432111 232 44457766432
Q ss_pred CccccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCCCC-cc-c-HHhHHHH
Q 044601 86 HFFLRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDPYN-KW-E-LVKKAEK 162 (213)
Q Consensus 86 ~~~l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py~-~W-~-i~~lA~~ 162 (213)
.......+||.||.|-|..+... ..+.........++..+..+|+ |+|.+.++.+...... .| + +...+..
T Consensus 282 ~~~~~~~~fD~Vi~dpP~~~~~~-----~~~~~~~~~~~~~l~~~~~~Lk-pgG~lv~~~~~~~~~~~~~~~~v~~~~~~ 355 (396)
T 2as0_A 282 KLQKKGEKFDIVVLDPPAFVQHE-----KDLKAGLRAYFNVNFAGLNLVK-DGGILVTCSCSQHVDLQMFKDMIIAAGAK 355 (396)
T ss_dssp HHHHTTCCEEEEEECCCCSCSSG-----GGHHHHHHHHHHHHHHHHTTEE-EEEEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred HHHhhCCCCCEEEECCCCCCCCH-----HHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 21112468999999999877421 1344555667889999999998 9999988888654321 12 2 2345666
Q ss_pred hCcEEE
Q 044601 163 IGLTLQ 168 (213)
Q Consensus 163 ~gl~l~ 168 (213)
.|..+.
T Consensus 356 ~~~~~~ 361 (396)
T 2as0_A 356 AGKFLK 361 (396)
T ss_dssp TTEEEE
T ss_pred cCCeEE
Confidence 675553
No 84
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=96.34 E-value=0.03 Score=48.48 Aligned_cols=107 Identities=17% Similarity=0.137 Sum_probs=70.1
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHH------h-----CCCEEEEeeec
Q 044601 12 YSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELE------E-----RGCLVFYGVDA 80 (213)
Q Consensus 12 y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~------~-----~g~~V~~gVDA 80 (213)
..++.+||=||=|.=.++.+|++..+....|+|.-.+ ++..+ .+..|++.+. . ..+.+ ..-|+
T Consensus 103 ~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~--~~~~~---~a~~~~~~~~~~~~ln~~~~~~~~v~~-~~~d~ 176 (336)
T 2b25_A 103 INPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVR--KDHHD---LAKKNYKHWRDSWKLSHVEEWPDNVDF-IHKDI 176 (336)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESS--HHHHH---HHHHHHHHHHHHHTTTCSSCCCCCEEE-EESCT
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCC--HHHHH---HHHHHHHHhhcccccccccccCCceEE-EECCh
Confidence 3567899999999999999999988655677776554 33333 3667776643 1 13333 44577
Q ss_pred cccCCCccccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEec
Q 044601 81 MQMSQHFFLRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHK 146 (213)
Q Consensus 81 t~L~~~~~l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~ 146 (213)
.++.. .+....||.|+.|.|..- .++..+..+|+ ++|.+.+...
T Consensus 177 ~~~~~--~~~~~~fD~V~~~~~~~~-------------------~~l~~~~~~Lk-pgG~lv~~~~ 220 (336)
T 2b25_A 177 SGATE--DIKSLTFDAVALDMLNPH-------------------VTLPVFYPHLK-HGGVCAVYVV 220 (336)
T ss_dssp TCCC---------EEEEEECSSSTT-------------------TTHHHHGGGEE-EEEEEEEEES
T ss_pred HHccc--ccCCCCeeEEEECCCCHH-------------------HHHHHHHHhcC-CCcEEEEEeC
Confidence 76532 223457999999877432 16678889998 9999887653
No 85
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=96.32 E-value=0.04 Score=46.11 Aligned_cols=131 Identities=15% Similarity=0.215 Sum_probs=85.9
Q ss_pred CCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCC---EEEEeeeccccCCCccccC
Q 044601 15 KQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGC---LVFYGVDAMQMSQHFFLRT 91 (213)
Q Consensus 15 ~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~---~V~~gVDAt~L~~~~~l~~ 91 (213)
..+||=||=|.=.++..|++. +..++++-.+ . ++.+ .+..++ +..|. .-+...|+.++.. ...
T Consensus 69 ~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s-~-~~~~---~a~~~~---~~~~~~~~v~~~~~d~~~~~~---~~~ 134 (285)
T 4htf_A 69 KLRVLDAGGGEGQTAIKMAER---GHQVILCDLS-A-QMID---RAKQAA---EAKGVSDNMQFIHCAAQDVAS---HLE 134 (285)
T ss_dssp CCEEEEETCTTCHHHHHHHHT---TCEEEEEESC-H-HHHH---HHHHHH---HC-CCGGGEEEEESCGGGTGG---GCS
T ss_pred CCEEEEeCCcchHHHHHHHHC---CCEEEEEECC-H-HHHH---HHHHHH---HhcCCCcceEEEEcCHHHhhh---hcC
Confidence 579999999998999999877 3577766554 2 2222 133333 33332 2355668877653 235
Q ss_pred CcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccC-----------------------
Q 044601 92 HKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEG----------------------- 148 (213)
Q Consensus 92 ~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~----------------------- 148 (213)
..||.|+.+...--.. + ...+++.+..+|+ |+|.+.|+....
T Consensus 135 ~~fD~v~~~~~l~~~~---~-----------~~~~l~~~~~~Lk-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (285)
T 4htf_A 135 TPVDLILFHAVLEWVA---D-----------PRSVLQTLWSVLR-PGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKK 199 (285)
T ss_dssp SCEEEEEEESCGGGCS---C-----------HHHHHHHHHHTEE-EEEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCCCC
T ss_pred CCceEEEECchhhccc---C-----------HHHHHHHHHHHcC-CCeEEEEEEeCCchHHHHHHHhcCHHHHhhhcccc
Confidence 7899999986533221 0 1368889999998 999998875321
Q ss_pred --------CCCCcccHHhHHHHhCcEEEEEeecC
Q 044601 149 --------DPYNKWELVKKAEKIGLTLQEVVPFC 174 (213)
Q Consensus 149 --------~py~~W~i~~lA~~~gl~l~~~~~F~ 174 (213)
.+++.-.+..+.+++||.+++...+.
T Consensus 200 ~~~~~~~~~~~~~~~l~~~l~~aGf~v~~~~~~~ 233 (285)
T 4htf_A 200 KKRTLSPDYPRDPTQVYLWLEEAGWQIMGKTGVR 233 (285)
T ss_dssp ----CCCSCCBCHHHHHHHHHHTTCEEEEEEEES
T ss_pred ccccCCCCCCCCHHHHHHHHHHCCCceeeeeeEE
Confidence 11233467788999999999887774
No 86
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=96.32 E-value=0.0077 Score=53.39 Aligned_cols=113 Identities=14% Similarity=0.153 Sum_probs=73.2
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHH----HhCCCEEEEeeeccccCCCcc
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVREL----EERGCLVFYGVDAMQMSQHFF 88 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L----~~~g~~V~~gVDAt~L~~~~~ 88 (213)
.+..+||.||=|+=.++..|+++. +...|++.-.+. ++.+ -+..|+..+ ....++++ .-|+.+.-..
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~-~~~~V~~VDis~--~~l~---~Ar~~~~~~~~gl~~~rv~~~-~~D~~~~l~~-- 189 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHA-SIEQIDMCEIDK--MVVD---VSKQFFPDVAIGYEDPRVNLV-IGDGVAFLKN-- 189 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCT-TCCEEEEEESCH--HHHH---HHHHHCHHHHGGGGSTTEEEE-ESCHHHHHHT--
T ss_pred CCCCEEEEECCCccHHHHHHHHcC-CCCEEEEEECCH--HHHH---HHHHHHHhhccccCCCcEEEE-ECCHHHHHHh--
Confidence 456899999999999999999875 356788777663 2222 244555544 22245544 4477653211
Q ss_pred ccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEe
Q 044601 89 LRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTH 145 (213)
Q Consensus 89 l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl 145 (213)
+....||.||.|.|+.-... .+ .....||+.+..+|+ ++|.+.+..
T Consensus 190 ~~~~~fDlIi~d~~~p~~~~---------~~-l~~~~~l~~~~~~Lk-pgG~lv~~~ 235 (334)
T 1xj5_A 190 AAEGSYDAVIVDSSDPIGPA---------KE-LFEKPFFQSVARALR-PGGVVCTQA 235 (334)
T ss_dssp SCTTCEEEEEECCCCTTSGG---------GG-GGSHHHHHHHHHHEE-EEEEEEEEC
T ss_pred ccCCCccEEEECCCCccCcc---------hh-hhHHHHHHHHHHhcC-CCcEEEEec
Confidence 12467999999987533211 11 113689999999998 999887764
No 87
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=96.29 E-value=0.023 Score=50.07 Aligned_cols=141 Identities=16% Similarity=0.041 Sum_probs=84.3
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCC--CEEEEeeeccccCCCccccC
Q 044601 14 SKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERG--CLVFYGVDAMQMSQHFFLRT 91 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g--~~V~~gVDAt~L~~~~~l~~ 91 (213)
++.+||=+|=|.=.||+.|++. + ..|+ +.|.-+...+ .+..|++...-.+ +. +..-|+.++........
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~-g--a~V~--~VD~s~~al~---~a~~n~~~~gl~~~~v~-~i~~D~~~~l~~~~~~~ 223 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAA-G--AEVT--HVDASKKAIG---WAKENQVLAGLEQAPIR-WICEDAMKFIQREERRG 223 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT-T--CEEE--EECSCHHHHH---HHHHHHHHHTCTTSCEE-EECSCHHHHHHHHHHHT
T ss_pred CCCcEEEcccccCHHHHHHHHc-C--CEEE--EEECCHHHHH---HHHHHHHHcCCCccceE-EEECcHHHHHHHHHhcC
Confidence 4679999998888888888874 3 3554 4553333333 2566766543222 33 44557776532211114
Q ss_pred CcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCCCCcc---cH-HhHHHHhCcEE
Q 044601 92 HKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDPYNKW---EL-VKKAEKIGLTL 167 (213)
Q Consensus 92 ~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py~~W---~i-~~lA~~~gl~l 167 (213)
.+||.||.|-|..+..... .+......+..++..|..+|+ ++|.+.++.......+.- ++ ...+++.|+.+
T Consensus 224 ~~fD~Ii~dPP~~~~~~~~----~~~~~~~~~~~ll~~~~~~Lk-pgG~lli~~~~~~~~~~~~~~~~l~~a~~~~g~~v 298 (332)
T 2igt_A 224 STYDIILTDPPKFGRGTHG----EVWQLFDHLPLMLDICREILS-PKALGLVLTAYSIRASFYSMHELMRETMRGAGGVV 298 (332)
T ss_dssp CCBSEEEECCCSEEECTTC----CEEEHHHHHHHHHHHHHHTBC-TTCCEEEEEECCTTSCHHHHHHHHHHHTTTSCSEE
T ss_pred CCceEEEECCccccCCchH----HHHHHHHHHHHHHHHHHHhcC-cCcEEEEEECCCCCCCHHHHHHHHHHHHHHcCCeE
Confidence 6899999999976632111 011234456788999999998 999977776544332221 22 22445678877
Q ss_pred E
Q 044601 168 Q 168 (213)
Q Consensus 168 ~ 168 (213)
.
T Consensus 299 ~ 299 (332)
T 2igt_A 299 A 299 (332)
T ss_dssp E
T ss_pred E
Confidence 5
No 88
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=96.29 E-value=0.061 Score=47.71 Aligned_cols=137 Identities=13% Similarity=0.063 Sum_probs=88.1
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHh--------CCCEEEEeeeccccC
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEE--------RGCLVFYGVDAMQMS 84 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~--------~g~~V~~gVDAt~L~ 84 (213)
.++.+||=||=|.=.++..|++.++....++++-.. .+.+.. +..|++.+.. .++. ...-|+.++.
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s-~~~l~~----a~~~~~~~~~~~~g~~~~~~v~-~~~~d~~~l~ 155 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDML-DNQLEV----ARKYVEYHAEKFFGSPSRSNVR-FLKGFIENLA 155 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECC-HHHHHH----HHHTHHHHHHHHHSSTTCCCEE-EEESCTTCGG
T ss_pred CCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECC-HHHHHH----HHHHHHHhhhhcccccCCCceE-EEEccHHHhh
Confidence 467899999999999999999998656677776554 232222 4455544421 2343 3445888764
Q ss_pred CCc--cccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCC-------------
Q 044601 85 QHF--FLRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGD------------- 149 (213)
Q Consensus 85 ~~~--~l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~------------- 149 (213)
... ++....||.|+.|+...-.. + ...+++.+..+|+ |+|.+.++-....
T Consensus 156 ~~~~~~~~~~~fD~V~~~~~l~~~~---d-----------~~~~l~~~~r~Lk-pgG~l~i~~~~~~~~~~~~~~~~~~~ 220 (383)
T 4fsd_A 156 TAEPEGVPDSSVDIVISNCVCNLST---N-----------KLALFKEIHRVLR-DGGELYFSDVYADRRLSEAAQQDPIL 220 (383)
T ss_dssp GCBSCCCCTTCEEEEEEESCGGGCS---C-----------HHHHHHHHHHHEE-EEEEEEEEEEEESSCCCHHHHHCHHH
T ss_pred hcccCCCCCCCEEEEEEccchhcCC---C-----------HHHHHHHHHHHcC-CCCEEEEEEeccccccCHhHhhhHHH
Confidence 321 33467899999997544321 0 2478889999998 9999888632211
Q ss_pred -------CCCcccHHhHHHHhCcEEEEE
Q 044601 150 -------PYNKWELVKKAEKIGLTLQEV 170 (213)
Q Consensus 150 -------py~~W~i~~lA~~~gl~l~~~ 170 (213)
.+..-.+..+.+++||...+.
T Consensus 221 ~~~~~~~~~~~~~~~~ll~~aGF~~v~~ 248 (383)
T 4fsd_A 221 YGECLGGALYLEDFRRLVAEAGFRDVRL 248 (383)
T ss_dssp HHTTCTTCCBHHHHHHHHHHTTCCCEEE
T ss_pred hhcccccCCCHHHHHHHHHHCCCceEEE
Confidence 122234556888999975544
No 89
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=96.29 E-value=0.058 Score=43.31 Aligned_cols=103 Identities=17% Similarity=0.127 Sum_probs=65.8
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCCc
Q 044601 14 SKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTHK 93 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~~ 93 (213)
+..+||=||=|.=.++..|++. +..+++.-.+ .++.+. +..++.... .++.+ ...|+.++. +. ..
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~---~~~~~~~D~s--~~~~~~---a~~~~~~~~-~~~~~-~~~d~~~~~----~~-~~ 101 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK---FKNTWAVDLS--QEMLSE---AENKFRSQG-LKPRL-ACQDISNLN----IN-RK 101 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG---SSEEEEECSC--HHHHHH---HHHHHHHTT-CCCEE-ECCCGGGCC----CS-CC
T ss_pred CCCeEEEeCCCCCHHHHHHHHC---CCcEEEEECC--HHHHHH---HHHHHhhcC-CCeEE-EecccccCC----cc-CC
Confidence 5689999999998899999876 2456555433 333321 333332211 13443 445776653 22 67
Q ss_pred ccEEEEcC---CcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEe
Q 044601 94 FDRVIYNF---PHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTH 145 (213)
Q Consensus 94 FDrIiFNF---PH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl 145 (213)
||.|+.++ +|+.. ..-+..+++.+..+|+ |+|.+.++.
T Consensus 102 fD~v~~~~~~l~~~~~-------------~~~~~~~l~~~~~~L~-pgG~l~~~~ 142 (246)
T 1y8c_A 102 FDLITCCLDSTNYIID-------------SDDLKKYFKAVSNHLK-EGGVFIFDI 142 (246)
T ss_dssp EEEEEECTTGGGGCCS-------------HHHHHHHHHHHHTTEE-EEEEEEEEE
T ss_pred ceEEEEcCccccccCC-------------HHHHHHHHHHHHHhcC-CCcEEEEEe
Confidence 99999976 55532 1234578899999998 999988864
No 90
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=96.28 E-value=0.004 Score=55.29 Aligned_cols=113 Identities=13% Similarity=0.078 Sum_probs=71.3
Q ss_pred CeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCCccc
Q 044601 16 QRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTHKFD 95 (213)
Q Consensus 16 ~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~~FD 95 (213)
.+||.||=|+-+.++.|++.+. ...|++.-+| .++.+. +.+++.....-.++| +--||.+.-.. +...+||
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p-~~~v~~VEid--p~vi~~---Ar~~~~~~~~~rv~v-~~~Da~~~l~~--~~~~~fD 161 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYP-QSRNTVVELD--AELARL---SREWFDIPRAPRVKI-RVDDARMVAES--FTPASRD 161 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHST-TCEEEEEESC--HHHHHH---HHHHSCCCCTTTEEE-EESCHHHHHHT--CCTTCEE
T ss_pred CEEEEEECCcCHHHHHHHHHCC-CcEEEEEECC--HHHHHH---HHHhccccCCCceEE-EECcHHHHHhh--ccCCCCC
Confidence 4999999999999999999874 5577776666 233321 333322111223444 34577664322 1247899
Q ss_pred EEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccC
Q 044601 96 RVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEG 148 (213)
Q Consensus 96 rIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~ 148 (213)
.||.+.+...... . ...-..||+.++.+|+ ++|.+.+.+.+.
T Consensus 162 vIi~D~~~~~~~~-~---------~L~t~efl~~~~r~Lk-pgGvlv~~~~~~ 203 (317)
T 3gjy_A 162 VIIRDVFAGAITP-Q---------NFTTVEFFEHCHRGLA-PGGLYVANCGDH 203 (317)
T ss_dssp EEEECCSTTSCCC-G---------GGSBHHHHHHHHHHEE-EEEEEEEEEEEC
T ss_pred EEEECCCCccccc-h---------hhhHHHHHHHHHHhcC-CCcEEEEEecCC
Confidence 9999865433211 0 0112589999999998 999988887654
No 91
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=96.27 E-value=0.0052 Score=52.62 Aligned_cols=108 Identities=16% Similarity=0.192 Sum_probs=69.8
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHH-----------HhCCCEEEEeeecc
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVREL-----------EERGCLVFYGVDAM 81 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L-----------~~~g~~V~~gVDAt 81 (213)
.+..+||.||=|+=.++..|+++ + ..+|++.-.|.. +.+ -+.+++ .+ ....++++. -||.
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~-~-~~~v~~vDid~~--~i~---~ar~~~-~~~~~l~~~~~~~~~~~v~~~~-~D~~ 144 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQH-D-VDEVIMVEIDED--VIM---VSKDLI-KIDNGLLEAMLNGKHEKAKLTI-GDGF 144 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTS-C-CSEEEEEESCHH--HHH---HHHHHT-CTTTTHHHHHHTTCCSSEEEEE-SCHH
T ss_pred CCCCeEEEEcCCcCHHHHHHHhC-C-CCEEEEEECCHH--HHH---HHHHHH-hhccccccccccCCCCcEEEEE-CchH
Confidence 35689999999999999999987 4 568888777732 222 133333 22 122344444 4665
Q ss_pred ccCCCccccCCcccEEEEcCCcCCCcccccchHHHHhhHHH-HHHHHHHHHhhcccCCCeEEEEe
Q 044601 82 QMSQHFFLRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKEL-VKGFLRNAKLLLKEENGEIHVTH 145 (213)
Q Consensus 82 ~L~~~~~l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~L-l~~Ff~Sa~~~L~~~~G~ihvTl 145 (213)
+.-.. ..+||.||.|.|..... ...| ...|++.+..+|+ |+|.+.+..
T Consensus 145 ~~l~~----~~~fD~Ii~d~~~~~~~-----------~~~l~~~~~l~~~~~~L~-pgG~lv~~~ 193 (281)
T 1mjf_A 145 EFIKN----NRGFDVIIADSTDPVGP-----------AKVLFSEEFYRYVYDALN-NPGIYVTQA 193 (281)
T ss_dssp HHHHH----CCCEEEEEEECCCCC----------------TTSHHHHHHHHHHEE-EEEEEEEEE
T ss_pred HHhcc----cCCeeEEEECCCCCCCc-----------chhhhHHHHHHHHHHhcC-CCcEEEEEc
Confidence 42111 46799999999863210 1122 3578999999998 999987764
No 92
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=96.23 E-value=0.075 Score=44.57 Aligned_cols=141 Identities=15% Similarity=0.044 Sum_probs=89.9
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCC
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTH 92 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~ 92 (213)
.+..+||=||=|.=..+..||+..+ ...|+| .|..+...+ -+..|++.+.-.+++++ .-|+..+.... ....
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~-~~~v~~--vD~s~~~~~---~a~~~~~~~~l~~v~~~-~~d~~~~~~~~-~~~~ 150 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRP-ELELVL--VDATRKKVA---FVERAIEVLGLKGARAL-WGRAEVLAREA-GHRE 150 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCT-TCEEEE--EESCHHHHH---HHHHHHHHHTCSSEEEE-ECCHHHHTTST-TTTT
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCC-CCEEEE--EECCHHHHH---HHHHHHHHhCCCceEEE-ECcHHHhhccc-ccCC
Confidence 5678999999998888888888763 456655 453333333 36778877754455554 44777765321 1136
Q ss_pred cccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCCCCcccHHhHHHHhCcEEEEEee
Q 044601 93 KFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDPYNKWELVKKAEKIGLTLQEVVP 172 (213)
Q Consensus 93 ~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py~~W~i~~lA~~~gl~l~~~~~ 172 (213)
.||.|+-+- +. + +..++..+..+|+ ++|.+.+.......-..-.+....+..|+.+.+..+
T Consensus 151 ~fD~I~s~a--~~-------------~---~~~ll~~~~~~Lk-pgG~l~~~~g~~~~~e~~~~~~~l~~~G~~~~~~~~ 211 (249)
T 3g89_A 151 AYARAVARA--VA-------------P---LCVLSELLLPFLE-VGGAAVAMKGPRVEEELAPLPPALERLGGRLGEVLA 211 (249)
T ss_dssp CEEEEEEES--SC-------------C---HHHHHHHHGGGEE-EEEEEEEEECSCCHHHHTTHHHHHHHHTEEEEEEEE
T ss_pred CceEEEECC--cC-------------C---HHHHHHHHHHHcC-CCeEEEEEeCCCcHHHHHHHHHHHHHcCCeEEEEEE
Confidence 899999752 11 0 2467888999998 999977654221111123355566778999999988
Q ss_pred cCCCCCCC
Q 044601 173 FCKQDYPG 180 (213)
Q Consensus 173 F~~~~yPg 180 (213)
+.....++
T Consensus 212 ~~~p~~~~ 219 (249)
T 3g89_A 212 LQLPLSGE 219 (249)
T ss_dssp EECTTTCC
T ss_pred eeCCCCCC
Confidence 85433333
No 93
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=96.23 E-value=0.14 Score=40.38 Aligned_cols=106 Identities=12% Similarity=0.152 Sum_probs=69.8
Q ss_pred cccCCCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCC--CEEEEeeeccccCC
Q 044601 8 WSNHYSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERG--CLVFYGVDAMQMSQ 85 (213)
Q Consensus 8 ~~~~y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g--~~V~~gVDAt~L~~ 85 (213)
++....+..+||=||=|.=.++..|++. +..+++.-.+ +++ ++..++.| ..-....|+.++
T Consensus 40 ~l~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~s--~~~----------~~~a~~~~~~~~~~~~~d~~~~-- 102 (218)
T 3ou2_A 40 RLRAGNIRGDVLELASGTGYWTRHLSGL---ADRVTALDGS--AEM----------IAEAGRHGLDNVEFRQQDLFDW-- 102 (218)
T ss_dssp HHTTTTSCSEEEEESCTTSHHHHHHHHH---SSEEEEEESC--HHH----------HHHHGGGCCTTEEEEECCTTSC--
T ss_pred HHhcCCCCCeEEEECCCCCHHHHHHHhc---CCeEEEEeCC--HHH----------HHHHHhcCCCCeEEEecccccC--
Confidence 4556777889999999998899999887 3467665444 222 22222233 223445677665
Q ss_pred CccccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEec
Q 044601 86 HFFLRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHK 146 (213)
Q Consensus 86 ~~~l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~ 146 (213)
.....||.|+.++-.-- .....+..+++.+..+|+ ++|.+.++..
T Consensus 103 ---~~~~~~D~v~~~~~l~~------------~~~~~~~~~l~~~~~~L~-pgG~l~~~~~ 147 (218)
T 3ou2_A 103 ---TPDRQWDAVFFAHWLAH------------VPDDRFEAFWESVRSAVA-PGGVVEFVDV 147 (218)
T ss_dssp ---CCSSCEEEEEEESCGGG------------SCHHHHHHHHHHHHHHEE-EEEEEEEEEE
T ss_pred ---CCCCceeEEEEechhhc------------CCHHHHHHHHHHHHHHcC-CCeEEEEEeC
Confidence 23578999999862111 112345678999999998 9999888754
No 94
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=96.21 E-value=0.011 Score=51.52 Aligned_cols=112 Identities=13% Similarity=0.173 Sum_probs=69.9
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHH----HhCCCEEEEeeeccccCCCcc
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVREL----EERGCLVFYGVDAMQMSQHFF 88 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L----~~~g~~V~~gVDAt~L~~~~~ 88 (213)
.+..+||.||=|+=.++..|+++. +...|++.-.|. ++.+ -+.+++..+ ....++++ .-||.+.-..
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~--~~i~---~ar~~~~~~~~~~~~~rv~v~-~~Da~~~l~~-- 164 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHP-SVESVVQCEIDE--DVIQ---VSKKFLPGMAIGYSSSKLTLH-VGDGFEFMKQ-- 164 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCT-TCCEEEEEESCH--HHHH---HHHHHCHHHHGGGGCTTEEEE-ESCHHHHHHT--
T ss_pred CCCCEEEEECCCchHHHHHHHHcC-CCCEEEEEECCH--HHHH---HHHHHhHHhhcccCCCcEEEE-ECcHHHHHhh--
Confidence 456899999999999999999774 346777776663 2222 144455443 22345555 3476652111
Q ss_pred ccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEe
Q 044601 89 LRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTH 145 (213)
Q Consensus 89 l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl 145 (213)
...+||.||.|.|..-.. ........||+.+..+|+ ++|.+.+..
T Consensus 165 -~~~~fD~Ii~d~~~~~~~----------~~~l~~~~~l~~~~~~Lk-pgG~lv~~~ 209 (304)
T 2o07_A 165 -NQDAFDVIITDSSDPMGP----------AESLFKESYYQLMKTALK-EDGVLCCQG 209 (304)
T ss_dssp -CSSCEEEEEEECC---------------------CHHHHHHHHHEE-EEEEEEEEE
T ss_pred -CCCCceEEEECCCCCCCc----------chhhhHHHHHHHHHhccC-CCeEEEEec
Confidence 246799999998854321 011123579999999998 999987765
No 95
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=96.20 E-value=0.057 Score=44.01 Aligned_cols=137 Identities=19% Similarity=0.112 Sum_probs=84.8
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCC---EEEEeeeccccCCCcc
Q 044601 12 YSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGC---LVFYGVDAMQMSQHFF 88 (213)
Q Consensus 12 y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~---~V~~gVDAt~L~~~~~ 88 (213)
..++.+||=||=|.=.++..|++.++ ..++++-.. +++.+ .+..+++ ..|. .-....|+.++..
T Consensus 34 ~~~~~~VLDiGcG~G~~~~~la~~~~--~~v~gvD~s--~~~l~---~a~~~~~---~~~~~~~v~~~~~d~~~~~~--- 100 (256)
T 1nkv_A 34 MKPGTRILDLGSGSGEMLCTWARDHG--ITGTGIDMS--SLFTA---QAKRRAE---ELGVSERVHFIHNDAAGYVA--- 100 (256)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHHTC--CEEEEEESC--HHHHH---HHHHHHH---HTTCTTTEEEEESCCTTCCC---
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhcC--CeEEEEeCC--HHHHH---HHHHHHH---hcCCCcceEEEECChHhCCc---
Confidence 35678999999999999999998873 466555443 33333 1343433 3332 2234557777532
Q ss_pred ccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEecc--CCC----------------
Q 044601 89 LRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKE--GDP---------------- 150 (213)
Q Consensus 89 l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~--~~p---------------- 150 (213)
...||.|+.+..---... ...+++.+..+|+ |+|.+.|+-.. ..+
T Consensus 101 --~~~fD~V~~~~~~~~~~~--------------~~~~l~~~~r~Lk-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (256)
T 1nkv_A 101 --NEKCDVAACVGATWIAGG--------------FAGAEELLAQSLK-PGGIMLIGEPYWRQLPATEEIAQACGVSSTSD 163 (256)
T ss_dssp --SSCEEEEEEESCGGGTSS--------------SHHHHHHHTTSEE-EEEEEEEEEEEETTCCSSHHHHHTTTCSCGGG
T ss_pred --CCCCCEEEECCChHhcCC--------------HHHHHHHHHHHcC-CCeEEEEecCcccCCCChHHHHHHHhcccccc
Confidence 577999997543211100 2467888999998 99999887421 111
Q ss_pred -CCcccHHhHHHHhCcEEEEEeecCCCCC
Q 044601 151 -YNKWELVKKAEKIGLTLQEVVPFCKQDY 178 (213)
Q Consensus 151 -y~~W~i~~lA~~~gl~l~~~~~F~~~~y 178 (213)
++.-.+..+.+++||..++....+...|
T Consensus 164 ~~~~~~~~~~l~~aGf~~~~~~~~~~~~~ 192 (256)
T 1nkv_A 164 FLTLPGLVGAFDDLGYDVVEMVLADQEGW 192 (256)
T ss_dssp SCCHHHHHHHHHTTTBCCCEEEECCHHHH
T ss_pred cCCHHHHHHHHHHCCCeeEEEEeCCHHHH
Confidence 1223466788899998877765444333
No 96
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=96.20 E-value=0.011 Score=51.91 Aligned_cols=115 Identities=19% Similarity=0.224 Sum_probs=74.1
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCCc
Q 044601 14 SKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTHK 93 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~~ 93 (213)
...+||=||=|.=.++..|++.. +...+++.-.+ ....+ .+..|+... ...+++ +..|+... ....
T Consensus 196 ~~~~VLDlGcG~G~~~~~la~~~-~~~~v~~vD~s--~~~l~---~a~~~~~~~-~~~~~~-~~~d~~~~------~~~~ 261 (343)
T 2pjd_A 196 TKGKVLDVGCGAGVLSVAFARHS-PKIRLTLCDVS--APAVE---ASRATLAAN-GVEGEV-FASNVFSE------VKGR 261 (343)
T ss_dssp CCSBCCBTTCTTSHHHHHHHHHC-TTCBCEEEESB--HHHHH---HHHHHHHHT-TCCCEE-EECSTTTT------CCSC
T ss_pred CCCeEEEecCccCHHHHHHHHHC-CCCEEEEEECC--HHHHH---HHHHHHHHh-CCCCEE-EEcccccc------ccCC
Confidence 35689999988888888888875 34466665444 22222 244444331 112334 34455432 1467
Q ss_pred ccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCCCC
Q 044601 94 FDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDPYN 152 (213)
Q Consensus 94 FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py~ 152 (213)
||.|+.|.|..-+ +..+......|++.+..+|+ |+|.+.|......||.
T Consensus 262 fD~Iv~~~~~~~g---------~~~~~~~~~~~l~~~~~~Lk-pgG~l~i~~~~~~~~~ 310 (343)
T 2pjd_A 262 FDMIISNPPFHDG---------MQTSLDAAQTLIRGAVRHLN-SGGELRIVANAFLPYP 310 (343)
T ss_dssp EEEEEECCCCCSS---------SHHHHHHHHHHHHHHGGGEE-EEEEEEEEEETTSSHH
T ss_pred eeEEEECCCcccC---------ccCCHHHHHHHHHHHHHhCC-CCcEEEEEEcCCCCcH
Confidence 9999999995422 12344567889999999998 9999999876655543
No 97
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=96.15 E-value=0.0067 Score=51.93 Aligned_cols=111 Identities=14% Similarity=0.158 Sum_probs=72.6
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHH----hCCCEEEEeeeccccCCCccc
Q 044601 14 SKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELE----ERGCLVFYGVDAMQMSQHFFL 89 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~----~~g~~V~~gVDAt~L~~~~~l 89 (213)
+..+||.||=|+=..+..++++.+ ...|++--.|. ++.+ -+.+|+..+. .-.++|+.+ ||.+.-..
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vEid~--~~v~---~ar~~~~~~~~~~~~~rv~v~~~-D~~~~l~~--- 144 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPS-VKKATLVDIDG--KVIE---YSKKFLPSIAGKLDDPRVDVQVD-DGFMHIAK--- 144 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTT-CSEEEEEESCH--HHHH---HHHHHCHHHHTTTTSTTEEEEES-CSHHHHHT---
T ss_pred CCCEEEEECCchHHHHHHHHhCCC-CceEEEEECCH--HHHH---HHHHHhHhhccccCCCceEEEEC-cHHHHHhh---
Confidence 568999999999999999997653 56787777763 2332 1445555442 224555544 77652111
Q ss_pred cCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEe
Q 044601 90 RTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTH 145 (213)
Q Consensus 90 ~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl 145 (213)
...+||.||-|-|...... + ......||+.+..+|+ ++|.+.+..
T Consensus 145 ~~~~fD~Ii~d~~~~~~~~-~---------~l~~~~~~~~~~~~L~-pgG~lv~~~ 189 (275)
T 1iy9_A 145 SENQYDVIMVDSTEPVGPA-V---------NLFTKGFYAGIAKALK-EDGIFVAQT 189 (275)
T ss_dssp CCSCEEEEEESCSSCCSCC-C---------CCSTTHHHHHHHHHEE-EEEEEEEEC
T ss_pred CCCCeeEEEECCCCCCCcc-h---------hhhHHHHHHHHHHhcC-CCcEEEEEc
Confidence 1467999999988733210 0 0012478999999998 999987775
No 98
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=96.13 E-value=0.041 Score=45.03 Aligned_cols=132 Identities=11% Similarity=0.133 Sum_probs=84.6
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCCc
Q 044601 14 SKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTHK 93 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~~ 93 (213)
+..+||=||=|.=.++..|++.. ...++++-.+ . ++.+. +..++. .........|+..+. +....
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~--~~~v~~vD~s-~-~~~~~---a~~~~~----~~~~~~~~~d~~~~~----~~~~~ 108 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHG--AKKVLGIDLS-E-RMLTE---AKRKTT----SPVVCYEQKAIEDIA----IEPDA 108 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTT--CSEEEEEESC-H-HHHHH---HHHHCC----CTTEEEEECCGGGCC----CCTTC
T ss_pred CCCEEEEECCCCCHHHHHHHHcC--CCEEEEEECC-H-HHHHH---HHHhhc----cCCeEEEEcchhhCC----CCCCC
Confidence 57899999999999999998873 2367666544 2 22221 222222 222334566777653 33578
Q ss_pred ccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccC----------------C-------C
Q 044601 94 FDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEG----------------D-------P 150 (213)
Q Consensus 94 FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~----------------~-------p 150 (213)
||.|+.+...--. ++ +..+++.+..+|+ ++|.+.|+.... . .
T Consensus 109 fD~v~~~~~l~~~---~~-----------~~~~l~~~~~~Lk-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (253)
T 3g5l_A 109 YNVVLSSLALHYI---AS-----------FDDICKKVYINLK-SSGSFIFSVEHPVFTADGRQDWYTDETGNKLHWPVDR 173 (253)
T ss_dssp EEEEEEESCGGGC---SC-----------HHHHHHHHHHHEE-EEEEEEEEEECHHHHSSSSCSCEECSSCCEEEEEECC
T ss_pred eEEEEEchhhhhh---hh-----------HHHHHHHHHHHcC-CCcEEEEEeCCCccccCccccceeccCCceEEEEecc
Confidence 9999998742221 10 2478888999998 999999974210 0 0
Q ss_pred --------------------CCcccHHhHHHHhCcEEEEEeecCC
Q 044601 151 --------------------YNKWELVKKAEKIGLTLQEVVPFCK 175 (213)
Q Consensus 151 --------------------y~~W~i~~lA~~~gl~l~~~~~F~~ 175 (213)
++.-.+..+.+++||.+++.....+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~t~~~~~~~l~~aGF~~~~~~e~~~ 218 (253)
T 3g5l_A 174 YFNESMRTSHFLGEDVQKYHRTVTTYIQTLLKNGFQINSVIEPEP 218 (253)
T ss_dssp TTCCCEEEEEETTEEEEEECCCHHHHHHHHHHTTEEEEEEECCCC
T ss_pred ccccceEEEeeccccCccEecCHHHHHHHHHHcCCeeeeeecCCC
Confidence 0223467788999999999876654
No 99
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=96.13 E-value=0.058 Score=41.27 Aligned_cols=128 Identities=14% Similarity=0.054 Sum_probs=79.3
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCC--EEEEeeeccccCCCcccc
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGC--LVFYGVDAMQMSQHFFLR 90 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~--~V~~gVDAt~L~~~~~l~ 90 (213)
.++.+||-||=|.=.++..|++.++ +..+++.-.+ ++..+ .+..|+.. .|. .|...-|+.. .....
T Consensus 24 ~~~~~vldiG~G~G~~~~~l~~~~~-~~~v~~vD~~--~~~~~---~a~~~~~~---~~~~~~~~~~~d~~~---~~~~~ 91 (178)
T 3hm2_A 24 KPHETLWDIGGGSGSIAIEWLRSTP-QTTAVCFEIS--EERRE---RILSNAIN---LGVSDRIAVQQGAPR---AFDDV 91 (178)
T ss_dssp CTTEEEEEESTTTTHHHHHHHTTSS-SEEEEEECSC--HHHHH---HHHHHHHT---TTCTTSEEEECCTTG---GGGGC
T ss_pred cCCCeEEEeCCCCCHHHHHHHHHCC-CCeEEEEeCC--HHHHH---HHHHHHHH---hCCCCCEEEecchHh---hhhcc
Confidence 4678999999999999999998863 5566665444 32332 24444443 333 2344455543 11111
Q ss_pred CCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCCCCcccHHhHHHHhCcEEEEE
Q 044601 91 THKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDPYNKWELVKKAEKIGLTLQEV 170 (213)
Q Consensus 91 ~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py~~W~i~~lA~~~gl~l~~~ 170 (213)
...||.|+.+++..- ..+++.+..+|+ ++|.+.++.... .+.-.+..+-++.|+.+.+.
T Consensus 92 ~~~~D~i~~~~~~~~------------------~~~l~~~~~~L~-~gG~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 150 (178)
T 3hm2_A 92 PDNPDVIFIGGGLTA------------------PGVFAAAWKRLP-VGGRLVANAVTV--ESEQMLWALRKQFGGTISSF 150 (178)
T ss_dssp CSCCSEEEECC-TTC------------------TTHHHHHHHTCC-TTCEEEEEECSH--HHHHHHHHHHHHHCCEEEEE
T ss_pred CCCCCEEEECCcccH------------------HHHHHHHHHhcC-CCCEEEEEeecc--ccHHHHHHHHHHcCCeeEEE
Confidence 268999998775422 367888899998 999998876532 12334445666677776655
Q ss_pred eec
Q 044601 171 VPF 173 (213)
Q Consensus 171 ~~F 173 (213)
...
T Consensus 151 ~~~ 153 (178)
T 3hm2_A 151 AIS 153 (178)
T ss_dssp EEE
T ss_pred Eee
Confidence 433
No 100
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=96.11 E-value=0.056 Score=42.70 Aligned_cols=125 Identities=14% Similarity=0.042 Sum_probs=79.5
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCCc
Q 044601 14 SKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTHK 93 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~~ 93 (213)
++.+||=||=|.=.++..|++.++ ...+++.-.+ +...+ .+..|+..+.-.++ .+...|+.++. ....
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s--~~~~~---~a~~~~~~~~~~~v-~~~~~d~~~~~-----~~~~ 132 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRP-EAHFTLLDSL--GKRVR---FLRQVQHELKLENI-EPVQSRVEEFP-----SEPP 132 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCT-TSEEEEEESC--HHHHH---HHHHHHHHTTCSSE-EEEECCTTTSC-----CCSC
T ss_pred CCCeEEEECCCCCHHHHHHHHHCC-CCEEEEEeCC--HHHHH---HHHHHHHHcCCCCe-EEEecchhhCC-----ccCC
Confidence 478999999999889999998763 5577665544 22222 24455554332233 34566777653 1367
Q ss_pred ccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCCCCcccHHhHHHHhCcEEEEEeec
Q 044601 94 FDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDPYNKWELVKKAEKIGLTLQEVVPF 173 (213)
Q Consensus 94 FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py~~W~i~~lA~~~gl~l~~~~~F 173 (213)
||.|+.|.- ++ +..++..+..+|+ ++|.+.+..-. ...-.+..+.+ |+.+.+..+|
T Consensus 133 ~D~i~~~~~-------~~-----------~~~~l~~~~~~L~-~gG~l~~~~~~---~~~~~~~~~~~--g~~~~~~~~~ 188 (207)
T 1jsx_A 133 FDGVISRAF-------AS-----------LNDMVSWCHHLPG-EQGRFYALKGQ---MPEDEIALLPE--EYQVESVVKL 188 (207)
T ss_dssp EEEEECSCS-------SS-----------HHHHHHHHTTSEE-EEEEEEEEESS---CCHHHHHTSCT--TEEEEEEEEE
T ss_pred cCEEEEecc-------CC-----------HHHHHHHHHHhcC-CCcEEEEEeCC---CchHHHHHHhc--CCceeeeeee
Confidence 999997631 10 2478888999998 99999887532 22223444333 8888887766
Q ss_pred C
Q 044601 174 C 174 (213)
Q Consensus 174 ~ 174 (213)
.
T Consensus 189 ~ 189 (207)
T 1jsx_A 189 Q 189 (207)
T ss_dssp E
T ss_pred c
Confidence 4
No 101
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=96.11 E-value=0.052 Score=44.09 Aligned_cols=134 Identities=11% Similarity=0.089 Sum_probs=83.0
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCC
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTH 92 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~ 92 (213)
.+..+||=||=|.=.++..|++.. ...+++.-.. . .+.+ .+..++... ..+. +...|+..+. +...
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s-~-~~~~---~a~~~~~~~--~~~~-~~~~d~~~~~----~~~~ 157 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKL--YATTDLLEPV-K-HMLE---EAKRELAGM--PVGK-FILASMETAT----LPPN 157 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHH--CSEEEEEESC-H-HHHH---HHHHHTTTS--SEEE-EEESCGGGCC----CCSS
T ss_pred cCCCEEEEECCCcCHHHHHHHHhh--cCEEEEEeCC-H-HHHH---HHHHHhccC--CceE-EEEccHHHCC----CCCC
Confidence 357899999999989999998875 3456665443 2 2222 122222211 1232 3445776653 2357
Q ss_pred cccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCC-------------CCcccHHhH
Q 044601 93 KFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDP-------------YNKWELVKK 159 (213)
Q Consensus 93 ~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~p-------------y~~W~i~~l 159 (213)
.||.|+.++..--. ...-+..+++.+..+|+ |+|.+.|+-..... ++.-.+..+
T Consensus 158 ~fD~v~~~~~l~~~------------~~~~~~~~l~~~~~~Lk-pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (254)
T 1xtp_A 158 TYDLIVIQWTAIYL------------TDADFVKFFKHCQQALT-PNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRL 224 (254)
T ss_dssp CEEEEEEESCGGGS------------CHHHHHHHHHHHHHHEE-EEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHH
T ss_pred CeEEEEEcchhhhC------------CHHHHHHHHHHHHHhcC-CCeEEEEEecCCCcccceecccCCcccCCHHHHHHH
Confidence 89999987642111 11224678888999998 99998887632110 122346678
Q ss_pred HHHhCcEEEEEeec
Q 044601 160 AEKIGLTLQEVVPF 173 (213)
Q Consensus 160 A~~~gl~l~~~~~F 173 (213)
.+++||.+++....
T Consensus 225 l~~aGf~~~~~~~~ 238 (254)
T 1xtp_A 225 FNESGVRVVKEAFQ 238 (254)
T ss_dssp HHHHTCCEEEEEEC
T ss_pred HHHCCCEEEEeeec
Confidence 88999999887654
No 102
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=96.07 E-value=0.032 Score=44.04 Aligned_cols=112 Identities=17% Similarity=0.081 Sum_probs=68.8
Q ss_pred cCCCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccc
Q 044601 10 NHYSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFL 89 (213)
Q Consensus 10 ~~y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l 89 (213)
.+..+..+||=||=|.=.++..++... +..+++.-.+ +++.+. +..++.... ..+.+ ...|++.+. +
T Consensus 19 ~~~~~~~~vLDiGcG~G~~~~~~~~~~--~~~v~~vD~s--~~~~~~---a~~~~~~~~-~~~~~-~~~d~~~~~----~ 85 (209)
T 2p8j_A 19 NESNLDKTVLDCGAGGDLPPLSIFVED--GYKTYGIEIS--DLQLKK---AENFSRENN-FKLNI-SKGDIRKLP----F 85 (209)
T ss_dssp HHSSSCSEEEEESCCSSSCTHHHHHHT--TCEEEEEECC--HHHHHH---HHHHHHHHT-CCCCE-EECCTTSCC----S
T ss_pred hccCCCCEEEEECCCCCHHHHHHHHhC--CCEEEEEECC--HHHHHH---HHHHHHhcC-CceEE-EECchhhCC----C
Confidence 455678999999999877755555444 3466655443 333331 344443322 23444 345777653 3
Q ss_pred cCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEecc
Q 044601 90 RTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKE 147 (213)
Q Consensus 90 ~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~ 147 (213)
....||.|+.+.+-... ...-...+++.+..+|+ |+|.+.++...
T Consensus 86 ~~~~fD~v~~~~~l~~~------------~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~ 130 (209)
T 2p8j_A 86 KDESMSFVYSYGTIFHM------------RKNDVKEAIDEIKRVLK-PGGLACINFLT 130 (209)
T ss_dssp CTTCEEEEEECSCGGGS------------CHHHHHHHHHHHHHHEE-EEEEEEEEEEE
T ss_pred CCCceeEEEEcChHHhC------------CHHHHHHHHHHHHHHcC-CCcEEEEEEec
Confidence 35789999987432111 11224578888999998 99999888754
No 103
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=95.99 E-value=0.15 Score=43.45 Aligned_cols=135 Identities=14% Similarity=0.127 Sum_probs=82.5
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhC-CCEEEEeeeccccCCCccccC
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEER-GCLVFYGVDAMQMSQHFFLRT 91 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~-g~~V~~gVDAt~L~~~~~l~~ 91 (213)
.+..+||=||=|.=.++..|++.+. ...++++-.+ .+.+ .+..++....-. .+++ ...|+.++. + .
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~~---~~~~---~a~~~~~~~~~~~~v~~-~~~d~~~~~----~-~ 230 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNP-NAEIFGVDWA---SVLE---VAKENARIQGVASRYHT-IAGSAFEVD----Y-G 230 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCT-TCEEEEEECH---HHHH---HHHHHHHHHTCGGGEEE-EESCTTTSC----C-C
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCC-CCeEEEEecH---HHHH---HHHHHHHhcCCCcceEE-EecccccCC----C-C
Confidence 6678999999999999999999873 4566655443 3333 244555433211 2333 344666541 1 2
Q ss_pred CcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCC----------------------
Q 044601 92 HKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGD---------------------- 149 (213)
Q Consensus 92 ~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~---------------------- 149 (213)
..||.|+.+.+--... ..-...+++.+..+|+ |+|.+.|.-....
T Consensus 231 ~~~D~v~~~~~l~~~~------------~~~~~~~l~~~~~~L~-pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (335)
T 2r3s_A 231 NDYDLVLLPNFLHHFD------------VATCEQLLRKIKTALA-VEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPN 297 (335)
T ss_dssp SCEEEEEEESCGGGSC------------HHHHHHHHHHHHHHEE-EEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSS
T ss_pred CCCcEEEEcchhccCC------------HHHHHHHHHHHHHhCC-CCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCC
Confidence 3499999965432220 1123467788899998 9998877643211
Q ss_pred --CCCcccHHhHHHHhCcEEEEEeec
Q 044601 150 --PYNKWELVKKAEKIGLTLQEVVPF 173 (213)
Q Consensus 150 --py~~W~i~~lA~~~gl~l~~~~~F 173 (213)
.++.=++..+.+++||...+..+.
T Consensus 298 ~~~~t~~~~~~ll~~aGf~~~~~~~~ 323 (335)
T 2r3s_A 298 GDAYTFAEYESMFSNAGFSHSQLHSL 323 (335)
T ss_dssp CCCCCHHHHHHHHHHTTCSEEEEECC
T ss_pred CCcCCHHHHHHHHHHCCCCeeeEEEC
Confidence 111223456777889998887665
No 104
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=95.99 E-value=0.03 Score=47.55 Aligned_cols=109 Identities=18% Similarity=0.151 Sum_probs=73.9
Q ss_pred ccCCCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCcc
Q 044601 9 SNHYSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFF 88 (213)
Q Consensus 9 ~~~y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~ 88 (213)
+....++.+||=+|=|.=+||+.||+..+ +..++|.-.+ .+..+ .+..|++...-.++ ....-|+.++ ..
T Consensus 114 ~~~~~~~~~VLDlgcG~G~~s~~la~~~~-~~~V~~vD~s--~~av~---~a~~n~~~n~l~~~-~~~~~d~~~~-~~-- 183 (272)
T 3a27_A 114 AFISNENEVVVDMFAGIGYFTIPLAKYSK-PKLVYAIEKN--PTAYH---YLCENIKLNKLNNV-IPILADNRDV-EL-- 183 (272)
T ss_dssp HTSCCTTCEEEETTCTTTTTHHHHHHHTC-CSEEEEEECC--HHHHH---HHHHHHHHTTCSSE-EEEESCGGGC-CC--
T ss_pred HHhcCCCCEEEEecCcCCHHHHHHHHhCC-CCEEEEEeCC--HHHHH---HHHHHHHHcCCCCE-EEEECChHHc-Cc--
Confidence 34466789999999888889999998864 5577766444 32332 25566544322233 4667788876 22
Q ss_pred ccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccC
Q 044601 89 LRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEG 148 (213)
Q Consensus 89 l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~ 148 (213)
...||+||.|.|. +. ..++..+..+|+ ++|.|+++-...
T Consensus 184 --~~~~D~Vi~d~p~-~~-----------------~~~l~~~~~~Lk-pgG~l~~s~~~~ 222 (272)
T 3a27_A 184 --KDVADRVIMGYVH-KT-----------------HKFLDKTFEFLK-DRGVIHYHETVA 222 (272)
T ss_dssp --TTCEEEEEECCCS-SG-----------------GGGHHHHHHHEE-EEEEEEEEEEEE
T ss_pred --cCCceEEEECCcc-cH-----------------HHHHHHHHHHcC-CCCEEEEEEcCc
Confidence 4679999999996 21 146777888998 999999876543
No 105
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=95.98 E-value=0.036 Score=43.63 Aligned_cols=104 Identities=14% Similarity=0.180 Sum_probs=66.4
Q ss_pred CeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCCccc
Q 044601 16 QRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTHKFD 95 (213)
Q Consensus 16 ~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~~FD 95 (213)
.+||=||=|.=.++..|++. .+..+++.-.+ +++.+ .+..++....-.+-.-....|+.++. +....||
T Consensus 45 ~~vLdiG~G~G~~~~~l~~~--~~~~v~~~D~s--~~~~~---~a~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~~D 113 (219)
T 3dlc_A 45 GTCIDIGSGPGALSIALAKQ--SDFSIRALDFS--KHMNE---IALKNIADANLNDRIQIVQGDVHNIP----IEDNYAD 113 (219)
T ss_dssp EEEEEETCTTSHHHHHHHHH--SEEEEEEEESC--HHHHH---HHHHHHHHTTCTTTEEEEECBTTBCS----SCTTCEE
T ss_pred CEEEEECCCCCHHHHHHHHc--CCCeEEEEECC--HHHHH---HHHHHHHhccccCceEEEEcCHHHCC----CCccccc
Confidence 39999999999999999987 24466555443 33332 14444433321122335566777754 3457899
Q ss_pred EEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEe
Q 044601 96 RVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTH 145 (213)
Q Consensus 96 rIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl 145 (213)
.|+.+...--.. + ...+++.+..+|+ |+|.+.|+-
T Consensus 114 ~v~~~~~l~~~~---~-----------~~~~l~~~~~~L~-pgG~l~~~~ 148 (219)
T 3dlc_A 114 LIVSRGSVFFWE---D-----------VATAFREIYRILK-SGGKTYIGG 148 (219)
T ss_dssp EEEEESCGGGCS---C-----------HHHHHHHHHHHEE-EEEEEEEEE
T ss_pred EEEECchHhhcc---C-----------HHHHHHHHHHhCC-CCCEEEEEe
Confidence 999987422211 0 2357888899998 999998874
No 106
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=95.95 E-value=0.2 Score=43.75 Aligned_cols=140 Identities=21% Similarity=0.135 Sum_probs=87.9
Q ss_pred CCCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCcccc
Q 044601 11 HYSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLR 90 (213)
Q Consensus 11 ~y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~ 90 (213)
...++.+||=+|=|.=+++..+|...++...|++.=.|. + +.+ .+..|++...-..+ -+..-|+.++...
T Consensus 200 ~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~-~-~i~---~a~~n~~~~g~~~i-~~~~~D~~~~~~~---- 269 (354)
T 3tma_A 200 DARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDE-K-RLG---LAREAALASGLSWI-RFLRADARHLPRF---- 269 (354)
T ss_dssp TCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCH-H-HHH---HHHHHHHHTTCTTC-EEEECCGGGGGGT----
T ss_pred CCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCH-H-HHH---HHHHHHHHcCCCce-EEEeCChhhCccc----
Confidence 345678888777776677777777664456787776652 2 222 25556544321123 3456688886532
Q ss_pred CCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCCCCcccHHhHHHHhCcEEEEE
Q 044601 91 THKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDPYNKWELVKKAEKIGLTLQEV 170 (213)
Q Consensus 91 ~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py~~W~i~~lA~~~gl~l~~~ 170 (213)
...||.||.|-|.--..+. ......+...++..+.++|+ ++|.+.+...+ ...+..+.+ .|+...+.
T Consensus 270 ~~~~D~Ii~npPyg~r~~~------~~~~~~~~~~~~~~~~~~Lk-pgG~l~i~t~~-----~~~~~~~~~-~g~~~~~~ 336 (354)
T 3tma_A 270 FPEVDRILANPPHGLRLGR------KEGLFHLYWDFLRGALALLP-PGGRVALLTLR-----PALLKRALP-PGFALRHA 336 (354)
T ss_dssp CCCCSEEEECCCSCC----------CHHHHHHHHHHHHHHHHTSC-TTCEEEEEESC-----HHHHHHHCC-TTEEEEEE
T ss_pred cCCCCEEEECCCCcCccCC------cccHHHHHHHHHHHHHHhcC-CCcEEEEEeCC-----HHHHHHHhh-cCcEEEEE
Confidence 2458999999996332111 12345677899999999998 99998887543 112334444 88888877
Q ss_pred eec
Q 044601 171 VPF 173 (213)
Q Consensus 171 ~~F 173 (213)
.+.
T Consensus 337 ~~l 339 (354)
T 3tma_A 337 RVV 339 (354)
T ss_dssp EEC
T ss_pred EEE
Confidence 665
No 107
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=95.94 E-value=0.024 Score=45.67 Aligned_cols=134 Identities=19% Similarity=0.196 Sum_probs=84.1
Q ss_pred ccCCCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCcc
Q 044601 9 SNHYSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFF 88 (213)
Q Consensus 9 ~~~y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~ 88 (213)
+..+.+..+||=||=|.=.++..|++. +..|..+++.+ ..++.++.++ ..|+..+.
T Consensus 42 l~~~~~~~~vLDiG~G~G~~~~~l~~~---------~~vD~s~~~~~----------~a~~~~~~~~-~~d~~~~~---- 97 (219)
T 1vlm_A 42 VKCLLPEGRGVEIGVGTGRFAVPLKIK---------IGVEPSERMAE----------IARKRGVFVL-KGTAENLP---- 97 (219)
T ss_dssp HHHHCCSSCEEEETCTTSTTHHHHTCC---------EEEESCHHHHH----------HHHHTTCEEE-ECBTTBCC----
T ss_pred HHHhCCCCcEEEeCCCCCHHHHHHHHH---------hccCCCHHHHH----------HHHhcCCEEE-EcccccCC----
Confidence 333444789999998887777777643 55664333322 2222266654 44776653
Q ss_pred ccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCC-------------------
Q 044601 89 LRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGD------------------- 149 (213)
Q Consensus 89 l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~------------------- 149 (213)
+....||.|+.+...--. + + ...+++.+..+|+ ++|.+.++.....
T Consensus 98 ~~~~~fD~v~~~~~l~~~---~--------~---~~~~l~~~~~~L~-pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (219)
T 1vlm_A 98 LKDESFDFALMVTTICFV---D--------D---PERALKEAYRILK-KGGYLIVGIVDRESFLGREYEKNKEKSVFYKN 162 (219)
T ss_dssp SCTTCEEEEEEESCGGGS---S--------C---HHHHHHHHHHHEE-EEEEEEEEEECSSSHHHHHHHHTTTC-CCSTT
T ss_pred CCCCCeeEEEEcchHhhc---c--------C---HHHHHHHHHHHcC-CCcEEEEEEeCCccHHHHHHHHHhcCcchhcc
Confidence 335789999998642211 0 0 1368888899998 9999988754321
Q ss_pred --CCCcccHHhHHHHhCcEEEEEeecCCCCCCCCcc
Q 044601 150 --PYNKWELVKKAEKIGLTLQEVVPFCKQDYPGYDN 183 (213)
Q Consensus 150 --py~~W~i~~lA~~~gl~l~~~~~F~~~~yPgY~~ 183 (213)
.++.-.+..+.+++||..++..... ..|+|..
T Consensus 163 ~~~~~~~~l~~~l~~~Gf~~~~~~~~~--~~~p~~~ 196 (219)
T 1vlm_A 163 ARFFSTEELMDLMRKAGFEEFKVVQTL--FKHPSEL 196 (219)
T ss_dssp CCCCCHHHHHHHHHHTTCEEEEEEEEC--CSCGGGC
T ss_pred cccCCHHHHHHHHHHCCCeEEEEeccc--CCCCCcc
Confidence 1233456678889999998876654 3355554
No 108
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=95.93 E-value=0.028 Score=49.41 Aligned_cols=116 Identities=14% Similarity=0.202 Sum_probs=75.5
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCH-HHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccC
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQ-ETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRT 91 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~-~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~ 91 (213)
.+.++||++|=||-+-++.++++. +...|+.--+|.. =++.++|= ..-|-..+..-.++|+.+ ||-+.-+. ..
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~-~v~~v~~VEID~~Vv~~a~~~l-p~~~~~~~~dpRv~v~~~-Dg~~~l~~---~~ 155 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHK-NVESITMVEIDAGVVSFCRQYL-PNHNAGSYDDPRFKLVID-DGVNFVNQ---TS 155 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCT-TCCEEEEEESCHHHHHHHHHHC-HHHHTTGGGCTTEEEEES-CTTTTTSC---SS
T ss_pred CCCCeEEEECCCchHHHHHHHHcC-CcceEEEEcCCHHHHHHHHhcC-ccccccccCCCcEEEEec-hHHHHHhh---cc
Confidence 356899999999999999999876 3568888888842 23334431 111122233444565544 66654332 25
Q ss_pred CcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEe
Q 044601 92 HKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTH 145 (213)
Q Consensus 92 ~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl 145 (213)
.+||.||-+-|...+.+. ...-..||+.++..|+ |+|-+.+-.
T Consensus 156 ~~yDvIi~D~~dp~~~~~----------~L~t~eFy~~~~~~L~-p~Gv~v~q~ 198 (294)
T 3o4f_A 156 QTFDVIISDCTDPIGPGE----------SLFTSAFYEGCKRCLN-PGGIFVAQN 198 (294)
T ss_dssp CCEEEEEESCCCCCCTTC----------CSSCCHHHHHHHHTEE-EEEEEEEEE
T ss_pred ccCCEEEEeCCCcCCCch----------hhcCHHHHHHHHHHhC-CCCEEEEec
Confidence 789999999987653211 1112489999999998 888766543
No 109
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=95.90 E-value=0.023 Score=45.87 Aligned_cols=111 Identities=15% Similarity=0.166 Sum_probs=71.6
Q ss_pred CCCCCCeEEEEecCChhHHHHHHHHhC----CCCeEEEeccCCHHHHHhhcchHHHHHHHHH-----hCCCEEEEeeecc
Q 044601 11 HYSSKQRILLVGEGDFSFSLCLAREFG----FAHNMVATCLDTQETIANKYSNAVDNVRELE-----ERGCLVFYGVDAM 81 (213)
Q Consensus 11 ~y~~~~~ILlVGEGnFSFS~aLa~~~~----~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~-----~~g~~V~~gVDAt 81 (213)
+-.++.+||-||=|.=.++..|++..+ +...+++.-.+ +++.+ .+..|++... ..++. +...|+.
T Consensus 77 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~--~~~~~---~a~~~~~~~~~~~~~~~~v~-~~~~d~~ 150 (227)
T 2pbf_A 77 VLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERV--KDLVN---FSLENIKRDKPELLKIDNFK-IIHKNIY 150 (227)
T ss_dssp TSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESC--HHHHH---HHHHHHHHHCGGGGSSTTEE-EEECCGG
T ss_pred hCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCC--HHHHH---HHHHHHHHcCccccccCCEE-EEECChH
Confidence 345679999999998888999998865 44577776554 33333 2555665543 22344 3445776
Q ss_pred ccCCCccccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccC
Q 044601 82 QMSQHFFLRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEG 148 (213)
Q Consensus 82 ~L~~~~~l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~ 148 (213)
............||.|+.+.+... ++..+..+|+ ++|.+.++.-.+
T Consensus 151 ~~~~~~~~~~~~fD~I~~~~~~~~--------------------~~~~~~~~Lk-pgG~lv~~~~~~ 196 (227)
T 2pbf_A 151 QVNEEEKKELGLFDAIHVGASASE--------------------LPEILVDLLA-ENGKLIIPIEED 196 (227)
T ss_dssp GCCHHHHHHHCCEEEEEECSBBSS--------------------CCHHHHHHEE-EEEEEEEEEEET
T ss_pred hcccccCccCCCcCEEEECCchHH--------------------HHHHHHHhcC-CCcEEEEEEccC
Confidence 632100012467999998876432 2356678998 999999998654
No 110
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=95.89 E-value=0.12 Score=45.33 Aligned_cols=109 Identities=15% Similarity=0.216 Sum_probs=71.2
Q ss_pred ccCCCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCcc
Q 044601 9 SNHYSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFF 88 (213)
Q Consensus 9 ~~~y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~ 88 (213)
+....++++||-||=|.-.++..++.+. .+..|++.-.+ +++.+ -|.++++.+.-..++ +..-||..+.
T Consensus 117 la~l~~g~rVLDIGcG~G~~ta~~lA~~-~ga~V~gIDis--~~~l~---~Ar~~~~~~gl~~v~-~v~gDa~~l~---- 185 (298)
T 3fpf_A 117 LGRFRRGERAVFIGGGPLPLTGILLSHV-YGMRVNVVEIE--PDIAE---LSRKVIEGLGVDGVN-VITGDETVID---- 185 (298)
T ss_dssp HTTCCTTCEEEEECCCSSCHHHHHHHHT-TCCEEEEEESS--HHHHH---HHHHHHHHHTCCSEE-EEESCGGGGG----
T ss_pred HcCCCCcCEEEEECCCccHHHHHHHHHc-cCCEEEEEECC--HHHHH---HHHHHHHhcCCCCeE-EEECchhhCC----
Confidence 4456789999999999988886654443 24577766555 33343 266666554332333 3355777652
Q ss_pred ccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccC
Q 044601 89 LRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEG 148 (213)
Q Consensus 89 l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~ 148 (213)
...||.|+...- + ++ ...+|+.+..+|+ |+|.+.+....+
T Consensus 186 --d~~FDvV~~~a~-~-----~d-----------~~~~l~el~r~Lk-PGG~Lvv~~~~~ 225 (298)
T 3fpf_A 186 --GLEFDVLMVAAL-A-----EP-----------KRRVFRNIHRYVD-TETRIIYRTYTG 225 (298)
T ss_dssp --GCCCSEEEECTT-C-----SC-----------HHHHHHHHHHHCC-TTCEEEEEECCG
T ss_pred --CCCcCEEEECCC-c-----cC-----------HHHHHHHHHHHcC-CCcEEEEEcCcc
Confidence 477999986432 1 11 1368888999998 999999887544
No 111
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=95.87 E-value=0.048 Score=43.47 Aligned_cols=116 Identities=16% Similarity=0.212 Sum_probs=78.5
Q ss_pred ccCCCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCcc
Q 044601 9 SNHYSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFF 88 (213)
Q Consensus 9 ~~~y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~ 88 (213)
+.+..+..+||=||=|.=.++..|+ ..+++.-.+.. ++.+. ..|+.++.
T Consensus 62 l~~~~~~~~vLDiG~G~G~~~~~l~------~~v~~~D~s~~--------------------~~~~~-~~d~~~~~---- 110 (215)
T 2zfu_A 62 LRQRPASLVVADFGCGDCRLASSIR------NPVHCFDLASL--------------------DPRVT-VCDMAQVP---- 110 (215)
T ss_dssp HHTSCTTSCEEEETCTTCHHHHHCC------SCEEEEESSCS--------------------STTEE-ESCTTSCS----
T ss_pred HhccCCCCeEEEECCcCCHHHHHhh------ccEEEEeCCCC--------------------CceEE-EeccccCC----
Confidence 4455678999999988766666652 46777666543 33333 34666643
Q ss_pred ccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCCCCcccHHhHHHHhCcEEE
Q 044601 89 LRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDPYNKWELVKKAEKIGLTLQ 168 (213)
Q Consensus 89 l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py~~W~i~~lA~~~gl~l~ 168 (213)
+....||.|+.++..- . ++ ...+++.+..+|+ ++|.+.|+-......+.-.+..+.+++||.+.
T Consensus 111 ~~~~~fD~v~~~~~l~-~---~~-----------~~~~l~~~~~~L~-~gG~l~i~~~~~~~~~~~~~~~~l~~~Gf~~~ 174 (215)
T 2zfu_A 111 LEDESVDVAVFCLSLM-G---TN-----------IRDFLEEANRVLK-PGGLLKVAEVSSRFEDVRTFLRAVTKLGFKIV 174 (215)
T ss_dssp CCTTCEEEEEEESCCC-S---SC-----------HHHHHHHHHHHEE-EEEEEEEEECGGGCSCHHHHHHHHHHTTEEEE
T ss_pred CCCCCEeEEEEehhcc-c---cC-----------HHHHHHHHHHhCC-CCeEEEEEEcCCCCCCHHHHHHHHHHCCCEEE
Confidence 3457899999987642 1 11 2467888899998 99999887544333355667788899999988
Q ss_pred EEe
Q 044601 169 EVV 171 (213)
Q Consensus 169 ~~~ 171 (213)
...
T Consensus 175 ~~~ 177 (215)
T 2zfu_A 175 SKD 177 (215)
T ss_dssp EEE
T ss_pred EEe
Confidence 753
No 112
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=95.84 E-value=0.041 Score=42.29 Aligned_cols=122 Identities=19% Similarity=0.135 Sum_probs=79.0
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHh-CCCEEEEeeeccc-cCCCccc
Q 044601 12 YSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEE-RGCLVFYGVDAMQ-MSQHFFL 89 (213)
Q Consensus 12 y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~-~g~~V~~gVDAt~-L~~~~~l 89 (213)
..++.+||-+|=|.=.++..|++.. ..+++.-.+ ++..+ .+..|++...- ..+. ....|+.. +.
T Consensus 31 ~~~~~~vldiG~G~G~~~~~l~~~~---~~v~~~D~~--~~~~~---~a~~~~~~~~~~~~~~-~~~~d~~~~~~----- 96 (192)
T 1l3i_A 31 PGKNDVAVDVGCGTGGVTLELAGRV---RRVYAIDRN--PEAIS---TTEMNLQRHGLGDNVT-LMEGDAPEALC----- 96 (192)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHTTS---SEEEEEESC--HHHHH---HHHHHHHHTTCCTTEE-EEESCHHHHHT-----
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhc---CEEEEEECC--HHHHH---HHHHHHHHcCCCcceE-EEecCHHHhcc-----
Confidence 4567899999999988888888764 567776554 22222 24444443321 1233 33446654 21
Q ss_pred cCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCCCCcccHHhHHHHhCcEE
Q 044601 90 RTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDPYNKWELVKKAEKIGLTL 167 (213)
Q Consensus 90 ~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py~~W~i~~lA~~~gl~l 167 (213)
....||.|+.+.|.- -+..++..+..+|+ ++|.+.+.... +...+.+..+.++.|+.+
T Consensus 97 ~~~~~D~v~~~~~~~-----------------~~~~~l~~~~~~l~-~gG~l~~~~~~--~~~~~~~~~~l~~~g~~~ 154 (192)
T 1l3i_A 97 KIPDIDIAVVGGSGG-----------------ELQEILRIIKDKLK-PGGRIIVTAIL--LETKFEAMECLRDLGFDV 154 (192)
T ss_dssp TSCCEEEEEESCCTT-----------------CHHHHHHHHHHTEE-EEEEEEEEECB--HHHHHHHHHHHHHTTCCC
T ss_pred cCCCCCEEEECCchH-----------------HHHHHHHHHHHhcC-CCcEEEEEecC--cchHHHHHHHHHHCCCce
Confidence 114799999986521 02578888999998 99999887653 235567777888888843
No 113
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=95.83 E-value=0.084 Score=41.01 Aligned_cols=105 Identities=15% Similarity=0.075 Sum_probs=66.0
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCC
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTH 92 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~ 92 (213)
.+..+||=||=|.=.++..|++. +.++++.-.+ ++..+ .+..++....-.++. ....|+.++. + ..
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s--~~~~~---~a~~~~~~~~~~~~~-~~~~d~~~~~----~-~~ 96 (199)
T 2xvm_A 31 VKPGKTLDLGCGNGRNSLYLAAN---GYDVDAWDKN--AMSIA---NVERIKSIENLDNLH-TRVVDLNNLT----F-DR 96 (199)
T ss_dssp SCSCEEEEETCTTSHHHHHHHHT---TCEEEEEESC--HHHHH---HHHHHHHHHTCTTEE-EEECCGGGCC----C-CC
T ss_pred cCCCeEEEEcCCCCHHHHHHHHC---CCeEEEEECC--HHHHH---HHHHHHHhCCCCCcE-EEEcchhhCC----C-CC
Confidence 45689999999998899999876 3467666554 22222 133444332211333 4455777753 2 57
Q ss_pred cccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEE
Q 044601 93 KFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVT 144 (213)
Q Consensus 93 ~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvT 144 (213)
.||.|+.+.+..-.. ..-+..+++.+..+|+ ++|.+.|.
T Consensus 97 ~~D~v~~~~~l~~~~------------~~~~~~~l~~~~~~L~-~gG~l~~~ 135 (199)
T 2xvm_A 97 QYDFILSTVVLMFLE------------AKTIPGLIANMQRCTK-PGGYNLIV 135 (199)
T ss_dssp CEEEEEEESCGGGSC------------GGGHHHHHHHHHHTEE-EEEEEEEE
T ss_pred CceEEEEcchhhhCC------------HHHHHHHHHHHHHhcC-CCeEEEEE
Confidence 799999986432210 1123568888999998 99996664
No 114
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=95.82 E-value=0.052 Score=44.09 Aligned_cols=107 Identities=18% Similarity=0.179 Sum_probs=68.4
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCC
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTH 92 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~ 92 (213)
.+..+||-||=|.=.++..|++.++ +..|++.-.+ ++..+ .+..+++.+.-....-+...|+....... ....
T Consensus 53 ~~~~~vLdiG~G~G~~~~~la~~~~-~~~v~~vD~~--~~~~~---~a~~~~~~~~~~~~v~~~~~d~~~~~~~~-~~~~ 125 (233)
T 2gpy_A 53 AAPARILEIGTAIGYSAIRMAQALP-EATIVSIERD--ERRYE---EAHKHVKALGLESRIELLFGDALQLGEKL-ELYP 125 (233)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHCT-TCEEEEECCC--HHHHH---HHHHHHHHTTCTTTEEEECSCGGGSHHHH-TTSC
T ss_pred cCCCEEEEecCCCcHHHHHHHHHCC-CCEEEEEECC--HHHHH---HHHHHHHHcCCCCcEEEEECCHHHHHHhc-ccCC
Confidence 3578999999998889999998874 5577665544 33333 24445443321111233445766532111 0136
Q ss_pred cccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEE
Q 044601 93 KFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVT 144 (213)
Q Consensus 93 ~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvT 144 (213)
.||.|+.+.|.. -...++..+..+|+ ++|.+.+.
T Consensus 126 ~fD~I~~~~~~~-----------------~~~~~l~~~~~~L~-pgG~lv~~ 159 (233)
T 2gpy_A 126 LFDVLFIDAAKG-----------------QYRRFFDMYSPMVR-PGGLILSD 159 (233)
T ss_dssp CEEEEEEEGGGS-----------------CHHHHHHHHGGGEE-EEEEEEEE
T ss_pred CccEEEECCCHH-----------------HHHHHHHHHHHHcC-CCeEEEEE
Confidence 799999988742 12478888999998 99999886
No 115
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=95.80 E-value=0.1 Score=42.80 Aligned_cols=133 Identities=15% Similarity=0.003 Sum_probs=83.2
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCC
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTH 92 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~ 92 (213)
.+..+||=||=|.=.++..|++.. .+..|+|.-.+ ++..+ -+..|++.+.-.++.++.+ |+.++..... ...
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~s--~~~~~---~a~~~~~~~~~~~v~~~~~-d~~~~~~~~~-~~~ 140 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICF-PHLHVTIVDSL--NKRIT---FLEKLSEALQLENTTFCHD-RAETFGQRKD-VRE 140 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHC-TTCEEEEEESC--HHHHH---HHHHHHHHHTCSSEEEEES-CHHHHTTCTT-TTT
T ss_pred CCCCEEEEecCCCCHHHHHHHHhC-CCCEEEEEeCC--HHHHH---HHHHHHHHcCCCCEEEEec-cHHHhccccc-ccC
Confidence 467899999988777777787654 34566665443 33332 2556666554324555544 7776642111 136
Q ss_pred cccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCCCC--cccHHhHHHHhCcEEEEE
Q 044601 93 KFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDPYN--KWELVKKAEKIGLTLQEV 170 (213)
Q Consensus 93 ~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py~--~W~i~~lA~~~gl~l~~~ 170 (213)
.||.|+.+.. . + +..+++.+..+|+ ++|.+.+.. |.... .-.+....+..|+.+.+.
T Consensus 141 ~fD~V~~~~~--~-----~-----------~~~~l~~~~~~Lk-pgG~l~~~~--g~~~~~~~~~~~~~l~~~g~~~~~~ 199 (240)
T 1xdz_A 141 SYDIVTARAV--A-----R-----------LSVLSELCLPLVK-KNGLFVALK--AASAEEELNAGKKAITTLGGELENI 199 (240)
T ss_dssp CEEEEEEECC--S-----C-----------HHHHHHHHGGGEE-EEEEEEEEE--CC-CHHHHHHHHHHHHHTTEEEEEE
T ss_pred CccEEEEecc--C-----C-----------HHHHHHHHHHhcC-CCCEEEEEe--CCCchHHHHHHHHHHHHcCCeEeEE
Confidence 7999998651 1 0 4578899999998 999987763 32221 122444566789999888
Q ss_pred eecC
Q 044601 171 VPFC 174 (213)
Q Consensus 171 ~~F~ 174 (213)
.+|.
T Consensus 200 ~~~~ 203 (240)
T 1xdz_A 200 HSFK 203 (240)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 7774
No 116
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=95.80 E-value=0.12 Score=41.75 Aligned_cols=136 Identities=19% Similarity=0.180 Sum_probs=82.8
Q ss_pred CCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCCcc
Q 044601 15 KQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTHKF 94 (213)
Q Consensus 15 ~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~~F 94 (213)
..+||=||=|.=.++..|++. +..++++-++ ++..+. +..++.......-.-....|++++. ....|
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s--~~~~~~---a~~~~~~~~~~~~v~~~~~d~~~~~-----~~~~f 133 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMASP---ERFVVGLDIS--ESALAK---ANETYGSSPKAEYFSFVKEDVFTWR-----PTELF 133 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCBT---TEEEEEECSC--HHHHHH---HHHHHTTSGGGGGEEEECCCTTTCC-----CSSCE
T ss_pred CCCEEEeCCCCCHHHHHHHhC---CCeEEEEECC--HHHHHH---HHHHhhccCCCcceEEEECchhcCC-----CCCCe
Confidence 459999999998888888752 4456655443 222221 3333322111111334566777754 13589
Q ss_pred cEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEecc------CCCC--CcccHHhHHHHhCcE
Q 044601 95 DRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKE------GDPY--NKWELVKKAEKIGLT 166 (213)
Q Consensus 95 DrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~------~~py--~~W~i~~lA~~~gl~ 166 (213)
|.|+.+....-.. ..-...+++.+..+|+ |+|.+.+.... +.|+ +.=.+..+.+.+||.
T Consensus 134 D~v~~~~~l~~~~------------~~~~~~~l~~~~~~Lk-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~ 200 (235)
T 3lcc_A 134 DLIFDYVFFCAIE------------PEMRPAWAKSMYELLK-PDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFK 200 (235)
T ss_dssp EEEEEESSTTTSC------------GGGHHHHHHHHHHHEE-EEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEE
T ss_pred eEEEEChhhhcCC------------HHHHHHHHHHHHHHCC-CCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCe
Confidence 9999875543321 1123478888999998 99998876542 2222 122456678889999
Q ss_pred EEEEeecCCC
Q 044601 167 LQEVVPFCKQ 176 (213)
Q Consensus 167 l~~~~~F~~~ 176 (213)
.++.......
T Consensus 201 ~~~~~~~~~~ 210 (235)
T 3lcc_A 201 AVSVEENPHA 210 (235)
T ss_dssp EEEEEECTTC
T ss_pred EEEEEecCCc
Confidence 9988776643
No 117
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=95.77 E-value=0.11 Score=41.77 Aligned_cols=133 Identities=18% Similarity=0.215 Sum_probs=83.2
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCC
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTH 92 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~ 92 (213)
.+..+||=||=|.=.++..|++. + ...+++.-.+ . ++.+ .+..++ ...++. +...|+..+. +...
T Consensus 42 ~~~~~vLdiG~G~G~~~~~l~~~-~-~~~v~~vD~s-~-~~~~---~a~~~~---~~~~~~-~~~~d~~~~~----~~~~ 106 (243)
T 3bkw_A 42 VGGLRIVDLGCGFGWFCRWAHEH-G-ASYVLGLDLS-E-KMLA---RARAAG---PDTGIT-YERADLDKLH----LPQD 106 (243)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT-T-CSEEEEEESC-H-HHHH---HHHHTS---CSSSEE-EEECCGGGCC----CCTT
T ss_pred cCCCEEEEEcCcCCHHHHHHHHC-C-CCeEEEEcCC-H-HHHH---HHHHhc---ccCCce-EEEcChhhcc----CCCC
Confidence 46789999999998899988876 3 2377776554 2 2211 011111 112343 3445776653 3357
Q ss_pred cccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccC------C-------------C---
Q 044601 93 KFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEG------D-------------P--- 150 (213)
Q Consensus 93 ~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~------~-------------p--- 150 (213)
.||.|+.+++.--. + -...+++.+..+|+ ++|.+.|+.... . +
T Consensus 107 ~fD~v~~~~~l~~~---~-----------~~~~~l~~~~~~L~-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (243)
T 3bkw_A 107 SFDLAYSSLALHYV---E-----------DVARLFRTVHQALS-PGGHFVFSTEHPIYMAPARPGWAIDAEGRRTWPIDR 171 (243)
T ss_dssp CEEEEEEESCGGGC---S-----------CHHHHHHHHHHHEE-EEEEEEEEEECHHHHCCSSCSCEECTTSCEEEEECC
T ss_pred CceEEEEecccccc---c-----------hHHHHHHHHHHhcC-cCcEEEEEeCCcccccCcCcceeecCCCceEEeecc
Confidence 89999998753221 0 02378888999998 999998875210 0 0
Q ss_pred --------------------CCcccHHhHHHHhCcEEEEEeecCC
Q 044601 151 --------------------YNKWELVKKAEKIGLTLQEVVPFCK 175 (213)
Q Consensus 151 --------------------y~~W~i~~lA~~~gl~l~~~~~F~~ 175 (213)
++.-.+..+.+++||..++...+.+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~t~~~~~~~l~~aGF~~~~~~~~~~ 216 (243)
T 3bkw_A 172 YLVEGPRKTDWLAKGVVKHHRTVGTTLNALIRSGFAIEHVEEFCP 216 (243)
T ss_dssp TTCCEEECTTHHHHSCCEEECCHHHHHHHHHHTTCEEEEEEECCC
T ss_pred cccccceeeeeccCceEEEeccHHHHHHHHHHcCCEeeeeccCCC
Confidence 1123455778899999999887654
No 118
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=95.66 E-value=0.093 Score=43.84 Aligned_cols=123 Identities=15% Similarity=0.153 Sum_probs=80.4
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCC--EEEEeeeccccCCCcccc
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGC--LVFYGVDAMQMSQHFFLR 90 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~--~V~~gVDAt~L~~~~~l~ 90 (213)
.++.+||=+|=|.=.++.++++. + + .++|.-.+.. .+. .+..|++ ..|+ .+. .-|+.+. +.
T Consensus 119 ~~~~~VLDiGcG~G~l~~~la~~-g-~-~v~gvDi~~~-~v~----~a~~n~~---~~~~~v~~~-~~d~~~~-----~~ 181 (254)
T 2nxc_A 119 RPGDKVLDLGTGSGVLAIAAEKL-G-G-KALGVDIDPM-VLP----QAEANAK---RNGVRPRFL-EGSLEAA-----LP 181 (254)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT-T-C-EEEEEESCGG-GHH----HHHHHHH---HTTCCCEEE-ESCHHHH-----GG
T ss_pred CCCCEEEEecCCCcHHHHHHHHh-C-C-eEEEEECCHH-HHH----HHHHHHH---HcCCcEEEE-ECChhhc-----Cc
Confidence 46789999999988888888774 4 3 8888777642 111 2344443 3343 333 2244432 22
Q ss_pred CCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCCCCcccHHhHHHHhCcEEEEE
Q 044601 91 THKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDPYNKWELVKKAEKIGLTLQEV 170 (213)
Q Consensus 91 ~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py~~W~i~~lA~~~gl~l~~~ 170 (213)
..+||.|+.|.|. ..+..++..+..+|+ ++|.+.++-... ...-.+..+.+++||.+.+.
T Consensus 182 ~~~fD~Vv~n~~~-----------------~~~~~~l~~~~~~Lk-pgG~lils~~~~--~~~~~v~~~l~~~Gf~~~~~ 241 (254)
T 2nxc_A 182 FGPFDLLVANLYA-----------------ELHAALAPRYREALV-PGGRALLTGILK--DRAPLVREAMAGAGFRPLEE 241 (254)
T ss_dssp GCCEEEEEEECCH-----------------HHHHHHHHHHHHHEE-EEEEEEEEEEEG--GGHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCEEEECCcH-----------------HHHHHHHHHHHHHcC-CCCEEEEEeecc--CCHHHHHHHHHHCCCEEEEE
Confidence 4679999999753 124578888999998 999988863221 23445667778899998876
Q ss_pred ee
Q 044601 171 VP 172 (213)
Q Consensus 171 ~~ 172 (213)
..
T Consensus 242 ~~ 243 (254)
T 2nxc_A 242 AA 243 (254)
T ss_dssp EE
T ss_pred ec
Confidence 54
No 119
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=95.65 E-value=0.05 Score=42.75 Aligned_cols=120 Identities=15% Similarity=0.148 Sum_probs=72.1
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCC
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTH 92 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~ 92 (213)
.+..+||-||=|.=.++..|++. + ..++++.-.+. .+.+ .+..++.. ..++.++ ..|+.++. +...
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~-~-~~~v~~~D~s~--~~~~---~a~~~~~~--~~~i~~~-~~d~~~~~----~~~~ 106 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLG-G-FPNVTSVDYSS--VVVA---AMQACYAH--VPQLRWE-TMDVRKLD----FPSA 106 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHT-T-CCCEEEEESCH--HHHH---HHHHHTTT--CTTCEEE-ECCTTSCC----SCSS
T ss_pred CCCCeEEEECCCCcHHHHHHHHc-C-CCcEEEEeCCH--HHHH---HHHHhccc--CCCcEEE-EcchhcCC----CCCC
Confidence 56789999999988888888876 3 23777766552 2222 13333321 1244444 45877762 3457
Q ss_pred cccEEEEcCCcCCCcccc-cchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEecc
Q 044601 93 KFDRVIYNFPHVGFIFRE-NSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKE 147 (213)
Q Consensus 93 ~FDrIiFNFPH~G~~~~e-~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~ 147 (213)
.||.|+.+.|-....... ..-..-..+..-+..+++.+..+|+ ++|.+.+....
T Consensus 107 ~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~li~~~~~ 161 (215)
T 2pxx_A 107 SFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLV-PGGRFISMTSA 161 (215)
T ss_dssp CEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEE-EEEEEEEEESC
T ss_pred cccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCc-CCCEEEEEeCC
Confidence 899999886642110000 0000001344556789999999998 99998887643
No 120
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=95.64 E-value=0.18 Score=40.98 Aligned_cols=136 Identities=17% Similarity=0.149 Sum_probs=81.3
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccC
Q 044601 12 YSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRT 91 (213)
Q Consensus 12 y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~ 91 (213)
..++.+||=||=|.=.++..|++..+ ...|+|.=.+ ++.+.. ..+..+. ..++..+. -|++.+.....+.
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~-~~~V~gvD~s-~~~l~~----~~~~a~~--~~~v~~~~-~d~~~~~~~~~~~- 124 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVD-EGIIYAVEYS-AKPFEK----LLELVRE--RNNIIPLL-FDASKPWKYSGIV- 124 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTT-TSEEEEECCC-HHHHHH----HHHHHHH--CSSEEEEC-SCTTCGGGTTTTC-
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcC-CCEEEEEECC-HHHHHH----HHHHHhc--CCCeEEEE-cCCCCchhhcccc-
Confidence 35678999999998888888998876 4567765544 222111 1111111 12444443 4777754322223
Q ss_pred CcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCCCCcccHHhH-------HHHhC
Q 044601 92 HKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDPYNKWELVKK-------AEKIG 164 (213)
Q Consensus 92 ~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py~~W~i~~l-------A~~~g 164 (213)
..||.|+.|.++.- -...+++.+..+|+ |+|.+.++++.+..-..+..+.+ .+++
T Consensus 125 ~~fD~V~~~~~~~~----------------~~~~~l~~~~r~Lk-pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~- 186 (210)
T 1nt2_A 125 EKVDLIYQDIAQKN----------------QIEILKANAEFFLK-EKGEVVIMVKARSIDSTAEPEEVFKSVLKEMEGD- 186 (210)
T ss_dssp CCEEEEEECCCSTT----------------HHHHHHHHHHHHEE-EEEEEEEEEEHHHHCTTSCHHHHHHHHHHHHHTT-
T ss_pred cceeEEEEeccChh----------------HHHHHHHHHHHHhC-CCCEEEEEEecCCccccCCHHHHHHHHHHHHHhh-
Confidence 68999999954321 12356788999998 99999999754321122222221 3445
Q ss_pred cEEEEEeecCC
Q 044601 165 LTLQEVVPFCK 175 (213)
Q Consensus 165 l~l~~~~~F~~ 175 (213)
|.+.+.....|
T Consensus 187 f~~~~~~~~~p 197 (210)
T 1nt2_A 187 FKIVKHGSLMP 197 (210)
T ss_dssp SEEEEEEECTT
T ss_pred cEEeeeecCCC
Confidence 99999877654
No 121
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=95.62 E-value=0.13 Score=42.21 Aligned_cols=102 Identities=17% Similarity=0.159 Sum_probs=65.9
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCC
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTH 92 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~ 92 (213)
.+..+||=||=|.=.++..|++.. ..+++.-++ . ++.+. +..++. ++.++ ..|+..+.. ..
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s-~-~~~~~---a~~~~~-----~~~~~-~~d~~~~~~-----~~ 109 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADSF---GTVEGLELS-A-DMLAI---ARRRNP-----DAVLH-HGDMRDFSL-----GR 109 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTTS---SEEEEEESC-H-HHHHH---HHHHCT-----TSEEE-ECCTTTCCC-----SC
T ss_pred CCCCcEEEeCCcCCHHHHHHHHcC---CeEEEEECC-H-HHHHH---HHhhCC-----CCEEE-ECChHHCCc-----cC
Confidence 456899999999999999998762 466665443 2 22221 222211 45544 457776542 57
Q ss_pred cccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEE
Q 044601 93 KFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVT 144 (213)
Q Consensus 93 ~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvT 144 (213)
.||.|+.++.-+... .+..-+..+++.+..+|+ |+|.+.|+
T Consensus 110 ~fD~v~~~~~~l~~~----------~~~~~~~~~l~~~~~~L~-pgG~l~i~ 150 (263)
T 3pfg_A 110 RFSAVTCMFSSIGHL----------AGQAELDAALERFAAHVL-PDGVVVVE 150 (263)
T ss_dssp CEEEEEECTTGGGGS----------CHHHHHHHHHHHHHHTEE-EEEEEEEC
T ss_pred CcCEEEEcCchhhhc----------CCHHHHHHHHHHHHHhcC-CCcEEEEE
Confidence 899999876322210 123445688999999998 99999885
No 122
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=95.61 E-value=0.033 Score=43.59 Aligned_cols=116 Identities=14% Similarity=0.083 Sum_probs=74.7
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCC--------CeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeecccc
Q 044601 12 YSSKQRILLVGEGDFSFSLCLAREFGFA--------HNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQM 83 (213)
Q Consensus 12 y~~~~~ILlVGEGnFSFS~aLa~~~~~~--------~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L 83 (213)
..++.+||-+|=|.=.++..|++..+.. ..|+|.-.+... + ..++.++-..|++.+
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~------~----------~~~~~~~~~~d~~~~ 83 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF------P----------LEGATFLCPADVTDP 83 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC------C----------CTTCEEECSCCTTSH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc------c----------CCCCeEEEeccCCCH
Confidence 4568999999999989999999987632 578777666421 0 023444324565543
Q ss_pred CCCc----cccCCcccEEEEcC-CcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccC
Q 044601 84 SQHF----FLRTHKFDRVIYNF-PHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEG 148 (213)
Q Consensus 84 ~~~~----~l~~~~FDrIiFNF-PH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~ 148 (213)
.... .+....||.|+-|+ ||..+.... .......++..++..+..+|+ ++|.+.++...+
T Consensus 84 ~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~~~~Lk-pgG~lv~~~~~~ 148 (196)
T 2nyu_A 84 RTSQRILEVLPGRRADVILSDMAPNATGFRDL----DHDRLISLCLTLLSVTPDILQ-PGGTFLCKTWAG 148 (196)
T ss_dssp HHHHHHHHHSGGGCEEEEEECCCCCCCSCHHH----HHHHHHHHHHHHHHHHHHHEE-EEEEEEEEECCS
T ss_pred HHHHHHHHhcCCCCCcEEEeCCCCCCCCCccc----CHHHHHHHHHHHHHHHHHHhc-CCCEEEEEecCC
Confidence 2110 12245799999998 454331111 112234566789999999998 999999887654
No 123
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=95.59 E-value=0.099 Score=43.07 Aligned_cols=146 Identities=14% Similarity=0.135 Sum_probs=88.7
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCC--EEEEeeeccccCCCcccc
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGC--LVFYGVDAMQMSQHFFLR 90 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~--~V~~gVDAt~L~~~~~l~ 90 (213)
.++++||=||=|.=.++..||+.. .+..+++.-...+ .+.+.=..+..+ +++.|. ..+..-|+..+...+
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~-~~~~v~GvD~s~~-~ml~~A~~A~~~---~~~~~~~~v~~~~~d~~~l~~~~--- 94 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAIND-QNTFYIGIDPVKE-NLFDISKKIIKK---PSKGGLSNVVFVIAAAESLPFEL--- 94 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTC-TTEEEEEECSCCG-GGHHHHHHHTSC---GGGTCCSSEEEECCBTTBCCGGG---
T ss_pred CCCCEEEEEeccCcHHHHHHHHhC-CCCEEEEEeCCHH-HHHHHHHHHHHH---HHHcCCCCeEEEEcCHHHhhhhc---
Confidence 346799999988888888898764 3556666555433 332210001111 123332 345677888884322
Q ss_pred CCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEE--EeccC----------CC--CCcc--
Q 044601 91 THKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHV--THKEG----------DP--YNKW-- 154 (213)
Q Consensus 91 ~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihv--Tl~~~----------~p--y~~W-- 154 (213)
...+|.|..|||..-. ....+.-...+|..+..+|+ |+|.+.| ++.+. .| ...|
T Consensus 95 ~d~v~~i~~~~~~~~~---------~~~~~~~~~~~l~~~~r~Lk-pGG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (225)
T 3p2e_A 95 KNIADSISILFPWGTL---------LEYVIKPNRDILSNVADLAK-KEAHFEFVTTYSDSYEEAEIKKRGLPLLSKAYFL 164 (225)
T ss_dssp TTCEEEEEEESCCHHH---------HHHHHTTCHHHHHHHHTTEE-EEEEEEEEECCCC--------------CCHHHHH
T ss_pred cCeEEEEEEeCCCcHH---------hhhhhcchHHHHHHHHHhcC-CCcEEEEEEeccccchhchhhhcCCCCCChhhcc
Confidence 2679999999983220 00111112467888999998 9999988 22221 01 1234
Q ss_pred --cHHhHHHHhCcEEEEEeecCCC
Q 044601 155 --ELVKKAEKIGLTLQEVVPFCKQ 176 (213)
Q Consensus 155 --~i~~lA~~~gl~l~~~~~F~~~ 176 (213)
++..+.+++||.+.+...|+..
T Consensus 165 ~~el~~~l~~aGf~v~~~~~~~~~ 188 (225)
T 3p2e_A 165 SEQYKAELSNSGFRIDDVKELDNE 188 (225)
T ss_dssp SHHHHHHHHHHTCEEEEEEEECHH
T ss_pred hHHHHHHHHHcCCCeeeeeecCHH
Confidence 3677888999999999998854
No 124
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=95.58 E-value=0.5 Score=40.96 Aligned_cols=139 Identities=17% Similarity=0.123 Sum_probs=84.8
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhC-CCEEEEeeeccccCCCcccc
Q 044601 12 YSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEER-GCLVFYGVDAMQMSQHFFLR 90 (213)
Q Consensus 12 y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~-g~~V~~gVDAt~L~~~~~l~ 90 (213)
.++..+||=||=|.=.++..|++.+. ...+++ .|- ..+.+ .+..++....-. +++ ....|+.+ ..+
T Consensus 180 ~~~~~~vlDvG~G~G~~~~~l~~~~~-~~~~~~--~D~-~~~~~---~a~~~~~~~~~~~~v~-~~~~d~~~---~~~-- 246 (374)
T 1qzz_A 180 WSAVRHVLDVGGGNGGMLAAIALRAP-HLRGTL--VEL-AGPAE---RARRRFADAGLADRVT-VAEGDFFK---PLP-- 246 (374)
T ss_dssp CTTCCEEEEETCTTSHHHHHHHHHCT-TCEEEE--EEC-HHHHH---HHHHHHHHTTCTTTEE-EEECCTTS---CCS--
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHCC-CCEEEE--EeC-HHHHH---HHHHHHHhcCCCCceE-EEeCCCCC---cCC--
Confidence 45679999999999999999999873 445554 555 44444 244444332111 233 33446543 111
Q ss_pred CCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEec--c--C------------------
Q 044601 91 THKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHK--E--G------------------ 148 (213)
Q Consensus 91 ~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~--~--~------------------ 148 (213)
..||.|+.+...--.. ..-...+++.+..+|+ |+|.+.|.-. . .
T Consensus 247 -~~~D~v~~~~vl~~~~------------~~~~~~~l~~~~~~L~-pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (374)
T 1qzz_A 247 -VTADVVLLSFVLLNWS------------DEDALTILRGCVRALE-PGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFM 312 (374)
T ss_dssp -CCEEEEEEESCGGGSC------------HHHHHHHHHHHHHHEE-EEEEEEEEECCH-------HHHHHHHHHHHHHHH
T ss_pred -CCCCEEEEeccccCCC------------HHHHHHHHHHHHHhcC-CCcEEEEEechhhcCCCCCcchhhhcchHHHHhC
Confidence 2399999976532221 1122467888899998 9999887543 1 1
Q ss_pred --CCCCcccHHhHHHHhCcEEEEEeecCCCC
Q 044601 149 --DPYNKWELVKKAEKIGLTLQEVVPFCKQD 177 (213)
Q Consensus 149 --~py~~W~i~~lA~~~gl~l~~~~~F~~~~ 177 (213)
..++.=++..+.+++||...+..+.....
T Consensus 313 ~~~~~~~~~~~~ll~~aGf~~~~~~~~~~~~ 343 (374)
T 1qzz_A 313 GGRVRTRDEVVDLAGSAGLALASERTSGSTT 343 (374)
T ss_dssp SCCCCCHHHHHHHHHTTTEEEEEEEEECCSS
T ss_pred CCcCCCHHHHHHHHHHCCCceEEEEECCCCc
Confidence 11222244567788999999988775433
No 125
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=95.57 E-value=0.24 Score=39.96 Aligned_cols=102 Identities=15% Similarity=0.177 Sum_probs=65.3
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCC
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTH 92 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~ 92 (213)
.++.+||-+|=|.=.++..|++. +..+++.-.+ + +..+ .+..|++...-........-|+.+.. +...
T Consensus 90 ~~~~~vldiG~G~G~~~~~l~~~---~~~v~~vD~~-~-~~~~---~a~~~~~~~~~~~~~~~~~~d~~~~~----~~~~ 157 (248)
T 2yvl_A 90 NKEKRVLEFGTGSGALLAVLSEV---AGEVWTFEAV-E-EFYK---TAQKNLKKFNLGKNVKFFNVDFKDAE----VPEG 157 (248)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH---SSEEEEECSC-H-HHHH---HHHHHHHHTTCCTTEEEECSCTTTSC----CCTT
T ss_pred CCCCEEEEeCCCccHHHHHHHHh---CCEEEEEecC-H-HHHH---HHHHHHHHcCCCCcEEEEEcChhhcc----cCCC
Confidence 46789999999988888888887 4577766554 2 2222 24445443311011223444555421 1346
Q ss_pred cccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEec
Q 044601 93 KFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHK 146 (213)
Q Consensus 93 ~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~ 146 (213)
.||.|+.|.|.. ..++..+..+|+ ++|.+.+...
T Consensus 158 ~~D~v~~~~~~~-------------------~~~l~~~~~~L~-~gG~l~~~~~ 191 (248)
T 2yvl_A 158 IFHAAFVDVREP-------------------WHYLEKVHKSLM-EGAPVGFLLP 191 (248)
T ss_dssp CBSEEEECSSCG-------------------GGGHHHHHHHBC-TTCEEEEEES
T ss_pred cccEEEECCcCH-------------------HHHHHHHHHHcC-CCCEEEEEeC
Confidence 799999987732 145777889998 9999988874
No 126
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=95.53 E-value=0.13 Score=40.91 Aligned_cols=128 Identities=11% Similarity=0.052 Sum_probs=79.0
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCCc
Q 044601 14 SKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTHK 93 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~~ 93 (213)
+..+||=||=|.=.++..|++. +..+++.-.+ +++.+. +..++. .++. ....|+.++. .. ..
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s--~~~~~~---a~~~~~----~~~~-~~~~d~~~~~----~~-~~ 106 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLA---GRTVYGIEPS--REMRMI---AKEKLP----KEFS-ITEGDFLSFE----VP-TS 106 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHT---TCEEEEECSC--HHHHHH---HHHHSC----TTCC-EESCCSSSCC----CC-SC
T ss_pred CCCeEEEeCCCCCHHHHHHHhC---CCeEEEEeCC--HHHHHH---HHHhCC----CceE-EEeCChhhcC----CC-CC
Confidence 5789999999999999999876 3466665443 222221 222222 2344 3455777653 22 78
Q ss_pred ccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCC-----------------------
Q 044601 94 FDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDP----------------------- 150 (213)
Q Consensus 94 FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~p----------------------- 150 (213)
||.|+.+...--.. ..-...+++.+..+|+ |+|.+.|+...-.+
T Consensus 107 fD~v~~~~~l~~~~------------~~~~~~~l~~~~~~Lk-pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (220)
T 3hnr_A 107 IDTIVSTYAFHHLT------------DDEKNVAIAKYSQLLN-KGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDL 173 (220)
T ss_dssp CSEEEEESCGGGSC------------HHHHHHHHHHHHHHSC-TTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred eEEEEECcchhcCC------------hHHHHHHHHHHHHhcC-CCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhc
Confidence 99999985432211 1112457888899998 99999998422110
Q ss_pred -----CCcccHHhHHHHhCcEEEEEee
Q 044601 151 -----YNKWELVKKAEKIGLTLQEVVP 172 (213)
Q Consensus 151 -----y~~W~i~~lA~~~gl~l~~~~~ 172 (213)
++.=.+..+.+++||.+.....
T Consensus 174 ~~~~~~~~~~~~~~l~~aGf~v~~~~~ 200 (220)
T 3hnr_A 174 QTEYYTRIPVMQTIFENNGFHVTFTRL 200 (220)
T ss_dssp HHSCCCBHHHHHHHHHHTTEEEEEEEC
T ss_pred chhhcCCHHHHHHHHHHCCCEEEEeec
Confidence 0122456788899998776643
No 127
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=95.51 E-value=0.055 Score=43.46 Aligned_cols=110 Identities=16% Similarity=0.067 Sum_probs=68.7
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCcccc-
Q 044601 12 YSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLR- 90 (213)
Q Consensus 12 y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~- 90 (213)
..+..+||=||=|.=.++..|++.++.+..|++.-.+ ++..+ .+..|++...-.+-.-+..-|+...-....-.
T Consensus 56 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~--~~~~~---~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 130 (223)
T 3duw_A 56 IQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEAS--EKHAD---IARSNIERANLNDRVEVRTGLALDSLQQIENEK 130 (223)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESC--HHHHH---HHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTT
T ss_pred hhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECC--HHHHH---HHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcC
Confidence 3467899999999989999999987545577666554 22222 24555544322221334455776532221111
Q ss_pred CCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEE
Q 044601 91 THKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVT 144 (213)
Q Consensus 91 ~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvT 144 (213)
...||.|+.+.|+.. ...+|..+..+|+ ++|.|.+.
T Consensus 131 ~~~fD~v~~d~~~~~-----------------~~~~l~~~~~~L~-pgG~lv~~ 166 (223)
T 3duw_A 131 YEPFDFIFIDADKQN-----------------NPAYFEWALKLSR-PGTVIIGD 166 (223)
T ss_dssp CCCCSEEEECSCGGG-----------------HHHHHHHHHHTCC-TTCEEEEE
T ss_pred CCCcCEEEEcCCcHH-----------------HHHHHHHHHHhcC-CCcEEEEe
Confidence 157999998876221 1368888999998 99976664
No 128
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=95.49 E-value=0.17 Score=41.04 Aligned_cols=106 Identities=19% Similarity=0.217 Sum_probs=66.8
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCCc
Q 044601 14 SKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTHK 93 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~~ 93 (213)
+..+||=||=|.=.++..|++. +..+++.-.+ +++.+ .+..++... ...+.+ ...|+..+.. ...
T Consensus 41 ~~~~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s--~~~l~---~a~~~~~~~-~~~v~~-~~~d~~~~~~-----~~~ 105 (252)
T 1wzn_A 41 EVRRVLDLACGTGIPTLELAER---GYEVVGLDLH--EEMLR---VARRKAKER-NLKIEF-LQGDVLEIAF-----KNE 105 (252)
T ss_dssp CCCEEEEETCTTCHHHHHHHHT---TCEEEEEESC--HHHHH---HHHHHHHHT-TCCCEE-EESCGGGCCC-----CSC
T ss_pred CCCEEEEeCCCCCHHHHHHHHC---CCeEEEEECC--HHHHH---HHHHHHHhc-CCceEE-EECChhhccc-----CCC
Confidence 4689999999988889999875 3466655443 33332 134443322 113444 3457777531 257
Q ss_pred ccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEec
Q 044601 94 FDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHK 146 (213)
Q Consensus 94 FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~ 146 (213)
||.|+.++..... .+..-+..+++.+..+|+ |+|.+.++..
T Consensus 106 fD~v~~~~~~~~~-----------~~~~~~~~~l~~~~~~L~-pgG~li~~~~ 146 (252)
T 1wzn_A 106 FDAVTMFFSTIMY-----------FDEEDLRKLFSKVAEALK-PGGVFITDFP 146 (252)
T ss_dssp EEEEEECSSGGGG-----------SCHHHHHHHHHHHHHHEE-EEEEEEEEEE
T ss_pred ccEEEEcCCchhc-----------CCHHHHHHHHHHHHHHcC-CCeEEEEecc
Confidence 9999976543221 122345678899999998 9999988764
No 129
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=95.46 E-value=0.12 Score=39.40 Aligned_cols=129 Identities=9% Similarity=0.112 Sum_probs=80.9
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCC
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTH 92 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~ 92 (213)
.+..+||=||=|.=.++..|++.. . .+++.-.+ ++..+. +..+ ..++.++. -| ..+...
T Consensus 16 ~~~~~vLDiG~G~G~~~~~l~~~~--~-~v~~vD~s--~~~~~~---a~~~-----~~~v~~~~-~d-------~~~~~~ 74 (170)
T 3i9f_A 16 GKKGVIVDYGCGNGFYCKYLLEFA--T-KLYCIDIN--VIALKE---VKEK-----FDSVITLS-DP-------KEIPDN 74 (170)
T ss_dssp SCCEEEEEETCTTCTTHHHHHTTE--E-EEEEECSC--HHHHHH---HHHH-----CTTSEEES-SG-------GGSCTT
T ss_pred CCCCeEEEECCCCCHHHHHHHhhc--C-eEEEEeCC--HHHHHH---HHHh-----CCCcEEEe-CC-------CCCCCC
Confidence 567899999999989999999875 2 66665444 222221 2222 22344432 23 233467
Q ss_pred cccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCC------C----CCcccHHhHHHH
Q 044601 93 KFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGD------P----YNKWELVKKAEK 162 (213)
Q Consensus 93 ~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~------p----y~~W~i~~lA~~ 162 (213)
.||.|+.+...--.. + ...+++.+..+|+ ++|.+.++-.... | ++.-++..+.+
T Consensus 75 ~~D~v~~~~~l~~~~---~-----------~~~~l~~~~~~L~-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~- 138 (170)
T 3i9f_A 75 SVDFILFANSFHDMD---D-----------KQHVISEVKRILK-DDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS- 138 (170)
T ss_dssp CEEEEEEESCSTTCS---C-----------HHHHHHHHHHHEE-EEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT-
T ss_pred ceEEEEEccchhccc---C-----------HHHHHHHHHHhcC-CCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh-
Confidence 899999886543321 0 2368888899998 9999988854322 1 12234555555
Q ss_pred hCcEEEEEeecCCCCCC
Q 044601 163 IGLTLQEVVPFCKQDYP 179 (213)
Q Consensus 163 ~gl~l~~~~~F~~~~yP 179 (213)
||...+...+.+..|.
T Consensus 139 -Gf~~~~~~~~~~~~~~ 154 (170)
T 3i9f_A 139 -NFVVEKRFNPTPYHFG 154 (170)
T ss_dssp -TEEEEEEECSSTTEEE
T ss_pred -CcEEEEccCCCCceEE
Confidence 9999999887765553
No 130
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=95.44 E-value=0.12 Score=41.42 Aligned_cols=113 Identities=19% Similarity=0.194 Sum_probs=65.1
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHh--CCCEEEEeeeccccCCCcccc
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEE--RGCLVFYGVDAMQMSQHFFLR 90 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~--~g~~V~~gVDAt~L~~~~~l~ 90 (213)
.++.+||=+|=|.=.++..+++. + ...|+|.-.+ +++.+ .+..|++...- ..+ -+..-|+.++... +.
T Consensus 52 ~~~~~vLDlGcGtG~~~~~~~~~-~-~~~v~gvD~s--~~~l~---~a~~~~~~~~~~~~~v-~~~~~d~~~~~~~--~~ 121 (201)
T 2ift_A 52 IHQSECLDGFAGSGSLGFEALSR-Q-AKKVTFLELD--KTVAN---QLKKNLQTLKCSSEQA-EVINQSSLDFLKQ--PQ 121 (201)
T ss_dssp HTTCEEEETTCTTCHHHHHHHHT-T-CSEEEEECSC--HHHHH---HHHHHHHHTTCCTTTE-EEECSCHHHHTTS--CC
T ss_pred cCCCeEEEcCCccCHHHHHHHHc-c-CCEEEEEECC--HHHHH---HHHHHHHHhCCCccce-EEEECCHHHHHHh--hc
Confidence 35789998887776777766554 2 3466655444 33333 25556554321 123 3445577765322 12
Q ss_pred CCc-ccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCC
Q 044601 91 THK-FDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGD 149 (213)
Q Consensus 91 ~~~-FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~ 149 (213)
... ||.|+.|.|.. . . ....++..+.+ ..+|+ |+|.+.++.....
T Consensus 122 ~~~~fD~I~~~~~~~-~-~---------~~~~~l~~~~~--~~~Lk-pgG~l~i~~~~~~ 167 (201)
T 2ift_A 122 NQPHFDVVFLDPPFH-F-N---------LAEQAISLLCE--NNWLK-PNALIYVETEKDK 167 (201)
T ss_dssp SSCCEEEEEECCCSS-S-C---------HHHHHHHHHHH--TTCEE-EEEEEEEEEESSS
T ss_pred cCCCCCEEEECCCCC-C-c---------cHHHHHHHHHh--cCccC-CCcEEEEEECCCC
Confidence 467 99999999922 1 1 11233333322 56898 9999999886543
No 131
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=95.43 E-value=0.074 Score=51.62 Aligned_cols=147 Identities=16% Similarity=0.125 Sum_probs=87.3
Q ss_pred ccccCCCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhC-CCEEEEeeeccccCC
Q 044601 7 KWSNHYSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEER-GCLVFYGVDAMQMSQ 85 (213)
Q Consensus 7 k~~~~y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~-g~~V~~gVDAt~L~~ 85 (213)
+++..+.++.+||=+|=|.=.||+.+++. + +..|+|.=.+ ...+ + -+..|++...-. .-.....-|+.+.-.
T Consensus 532 ~~l~~~~~g~~VLDlg~GtG~~sl~aa~~-g-a~~V~aVD~s-~~al-~---~a~~N~~~ngl~~~~v~~i~~D~~~~l~ 604 (703)
T 3v97_A 532 RMLGQMSKGKDFLNLFSYTGSATVHAGLG-G-ARSTTTVDMS-RTYL-E---WAERNLRLNGLTGRAHRLIQADCLAWLR 604 (703)
T ss_dssp HHHHHHCTTCEEEEESCTTCHHHHHHHHT-T-CSEEEEEESC-HHHH-H---HHHHHHHHTTCCSTTEEEEESCHHHHHH
T ss_pred HHHHHhcCCCcEEEeeechhHHHHHHHHC-C-CCEEEEEeCC-HHHH-H---HHHHHHHHcCCCccceEEEecCHHHHHH
Confidence 45666778899999988887888888763 3 4455554333 3333 2 256666532211 122355667766321
Q ss_pred CccccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCCCCcccHHhHHHHhCc
Q 044601 86 HFFLRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDPYNKWELVKKAEKIGL 165 (213)
Q Consensus 86 ~~~l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py~~W~i~~lA~~~gl 165 (213)
. ...+||.||.|-|..+..... ..+.........++..|..+|+ |+|.+.+..+.....-. ...-.+.|+
T Consensus 605 ~---~~~~fD~Ii~DPP~f~~~~~~---~~~~~~~~~~~~ll~~a~~~Lk-pgG~L~~s~~~~~~~~~---~~~l~~~g~ 674 (703)
T 3v97_A 605 E---ANEQFDLIFIDPPTFSNSKRM---EDAFDVQRDHLALMKDLKRLLR-AGGTIMFSNNKRGFRMD---LDGLAKLGL 674 (703)
T ss_dssp H---CCCCEEEEEECCCSBC----------CCBHHHHHHHHHHHHHHHEE-EEEEEEEEECCTTCCCC---HHHHHHTTE
T ss_pred h---cCCCccEEEECCccccCCccc---hhHHHHHHHHHHHHHHHHHhcC-CCcEEEEEECCcccccC---HHHHHHcCC
Confidence 1 246899999999987742110 0112344567788889999998 99999877765322111 334456676
Q ss_pred EEEEE
Q 044601 166 TLQEV 170 (213)
Q Consensus 166 ~l~~~ 170 (213)
.+...
T Consensus 675 ~~~~i 679 (703)
T 3v97_A 675 KAQEI 679 (703)
T ss_dssp EEEEC
T ss_pred ceeee
Confidence 65443
No 132
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=95.33 E-value=0.11 Score=42.97 Aligned_cols=109 Identities=17% Similarity=0.105 Sum_probs=69.0
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccC
Q 044601 12 YSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRT 91 (213)
Q Consensus 12 y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~ 91 (213)
..+..+||=||=|.=.++..||+.++.+..|++.-.+ ++..+ .+..|++...-....-+..-|+.+.-.... ..
T Consensus 61 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s--~~~~~---~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~-~~ 134 (248)
T 3tfw_A 61 LTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEAD--AHHAQ---VARENLQLAGVDQRVTLREGPALQSLESLG-EC 134 (248)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECC--HHHHH---HHHHHHHHTTCTTTEEEEESCHHHHHHTCC-SC
T ss_pred hcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECC--HHHHH---HHHHHHHHcCCCCcEEEEEcCHHHHHHhcC-CC
Confidence 3467899999999989999999987545677766554 22222 245555443221122344557766322111 13
Q ss_pred CcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEE
Q 044601 92 HKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVT 144 (213)
Q Consensus 92 ~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvT 144 (213)
..||.|+.+.|... ...+|..+..+|+ |+|.|.+.
T Consensus 135 ~~fD~V~~d~~~~~-----------------~~~~l~~~~~~Lk-pGG~lv~~ 169 (248)
T 3tfw_A 135 PAFDLIFIDADKPN-----------------NPHYLRWALRYSR-PGTLIIGD 169 (248)
T ss_dssp CCCSEEEECSCGGG-----------------HHHHHHHHHHTCC-TTCEEEEE
T ss_pred CCeEEEEECCchHH-----------------HHHHHHHHHHhcC-CCeEEEEe
Confidence 58999999765211 1247889999998 99988765
No 133
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=95.30 E-value=0.043 Score=44.04 Aligned_cols=110 Identities=10% Similarity=0.085 Sum_probs=68.2
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCcccc-
Q 044601 12 YSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLR- 90 (213)
Q Consensus 12 y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~- 90 (213)
..+..+||=||=|.=.++..|++.++....|++.-.+. +..+ .+..+++...-.+-.-+..-|+...-......
T Consensus 62 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~--~~~~---~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 136 (225)
T 3tr6_A 62 LMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDE--KSTA---LAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAG 136 (225)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCH--HHHH---HHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTT
T ss_pred hhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCH--HHHH---HHHHHHHHCCCCCceEEEeCCHHHHHHHhhhcc
Confidence 34678999999999899999998875456777665552 2222 24445443322121223345665432111101
Q ss_pred -CCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEE
Q 044601 91 -THKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVT 144 (213)
Q Consensus 91 -~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvT 144 (213)
...||.|+.+.|... ...+|..+..+|+ ++|.+.+.
T Consensus 137 ~~~~fD~v~~~~~~~~-----------------~~~~l~~~~~~L~-pgG~lv~~ 173 (225)
T 3tr6_A 137 QAWQYDLIYIDADKAN-----------------TDLYYEESLKLLR-EGGLIAVD 173 (225)
T ss_dssp CTTCEEEEEECSCGGG-----------------HHHHHHHHHHHEE-EEEEEEEE
T ss_pred CCCCccEEEECCCHHH-----------------HHHHHHHHHHhcC-CCcEEEEe
Confidence 168999998876211 1247888899998 99998874
No 134
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=95.28 E-value=0.3 Score=37.06 Aligned_cols=121 Identities=12% Similarity=0.126 Sum_probs=77.6
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCC
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTH 92 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~ 92 (213)
.+..+||=+|=|.=.++..|++ ...++++.-.+ +++.+ .+..|++...-..+. +...|+.+ .+...
T Consensus 34 ~~~~~vLdiG~G~G~~~~~l~~---~~~~v~~vD~~--~~~~~---~a~~~~~~~~~~~~~-~~~~d~~~-----~~~~~ 99 (183)
T 2yxd_A 34 NKDDVVVDVGCGSGGMTVEIAK---RCKFVYAIDYL--DGAIE---VTKQNLAKFNIKNCQ-IIKGRAED-----VLDKL 99 (183)
T ss_dssp CTTCEEEEESCCCSHHHHHHHT---TSSEEEEEECS--HHHHH---HHHHHHHHTTCCSEE-EEESCHHH-----HGGGC
T ss_pred CCCCEEEEeCCCCCHHHHHHHh---cCCeEEEEeCC--HHHHH---HHHHHHHHcCCCcEE-EEECCccc-----cccCC
Confidence 4678999999999999999987 35677776655 22222 244444332211222 34445554 12236
Q ss_pred cccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCCCCcccHHhHHHHhCcEEEEE
Q 044601 93 KFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDPYNKWELVKKAEKIGLTLQEV 170 (213)
Q Consensus 93 ~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py~~W~i~~lA~~~gl~l~~~ 170 (213)
.||.|+.+.| .. +..+++.+..+ ++|.+.++... +.....+....++.|+.+...
T Consensus 100 ~~D~i~~~~~--~~----------------~~~~l~~~~~~---~gG~l~~~~~~--~~~~~~~~~~l~~~g~~~~~~ 154 (183)
T 2yxd_A 100 EFNKAFIGGT--KN----------------IEKIIEILDKK---KINHIVANTIV--LENAAKIINEFESRGYNVDAV 154 (183)
T ss_dssp CCSEEEECSC--SC----------------HHHHHHHHHHT---TCCEEEEEESC--HHHHHHHHHHHHHTTCEEEEE
T ss_pred CCcEEEECCc--cc----------------HHHHHHHHhhC---CCCEEEEEecc--cccHHHHHHHHHHcCCeEEEE
Confidence 8999999999 10 12566666666 79999888743 334566777888889876654
No 135
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=95.14 E-value=0.03 Score=47.71 Aligned_cols=96 Identities=15% Similarity=0.067 Sum_probs=64.1
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHH----HHHhCCCEEEEeeeccccCCCccc
Q 044601 14 SKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVR----ELEERGCLVFYGVDAMQMSQHFFL 89 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~----~L~~~g~~V~~gVDAt~L~~~~~l 89 (213)
+.++||.||=|+=.++..++++ + ..|++.-.|. ++.+. +.+++. .+..-.++++ --||.+.-
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~-~--~~v~~veid~--~~i~~---ar~~~~~~~~~~~~~rv~~~-~~D~~~~~----- 137 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKY-D--THIDFVQADE--KILDS---FISFFPHFHEVKNNKNFTHA-KQLLDLDI----- 137 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTS-S--CEEEEECSCH--HHHGG---GTTTSTTHHHHHTCTTEEEE-SSGGGSCC-----
T ss_pred CCCEEEEEeCCcCHHHHHHHhC-C--CEEEEEECCH--HHHHH---HHHHHHhhccccCCCeEEEE-echHHHHH-----
Confidence 5689999999999999999987 4 6787777763 23221 112221 2333345554 34665532
Q ss_pred cCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEe
Q 044601 90 RTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTH 145 (213)
Q Consensus 90 ~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl 145 (213)
.+||.||-+.+.. . .||+.+..+|+ |+|.+.+..
T Consensus 138 --~~fD~Ii~d~~dp-----------~--------~~~~~~~~~L~-pgG~lv~~~ 171 (262)
T 2cmg_A 138 --KKYDLIFCLQEPD-----------I--------HRIDGLKRMLK-EDGVFISVA 171 (262)
T ss_dssp --CCEEEEEESSCCC-----------H--------HHHHHHHTTEE-EEEEEEEEE
T ss_pred --hhCCEEEECCCCh-----------H--------HHHHHHHHhcC-CCcEEEEEc
Confidence 6799999984310 1 19999999998 999987764
No 136
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=95.12 E-value=0.058 Score=40.90 Aligned_cols=111 Identities=17% Similarity=0.075 Sum_probs=67.1
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCCc
Q 044601 14 SKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTHK 93 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~~ 93 (213)
++.+||=+|=|.=.++..|++.. ..+++.-.+ +++.+ .+..|++...- .+. ++.-|+.+..........+
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~---~~v~~vD~~--~~~~~---~a~~~~~~~~~-~~~-~~~~d~~~~~~~~~~~~~~ 110 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEG---WEAVLVEKD--PEAVR---LLKENVRRTGL-GAR-VVALPVEVFLPEAKAQGER 110 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTT---CEEEEECCC--HHHHH---HHHHHHHHHTC-CCE-EECSCHHHHHHHHHHTTCC
T ss_pred CCCeEEEeCCCcCHHHHHHHHCC---CeEEEEeCC--HHHHH---HHHHHHHHcCC-ceE-EEeccHHHHHHhhhccCCc
Confidence 67899999999888888888763 235544443 33333 25556655432 444 3455666632211111347
Q ss_pred ccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCC
Q 044601 94 FDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGD 149 (213)
Q Consensus 94 FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~ 149 (213)
||.|+.|.|.. . . ...++..+.+ ..+|+ ++|.+.++.....
T Consensus 111 ~D~i~~~~~~~-~-~----------~~~~~~~~~~--~~~L~-~gG~~~~~~~~~~ 151 (171)
T 1ws6_A 111 FTVAFMAPPYA-M-D----------LAALFGELLA--SGLVE-AGGLYVLQHPKDL 151 (171)
T ss_dssp EEEEEECCCTT-S-C----------TTHHHHHHHH--HTCEE-EEEEEEEEEETTS
T ss_pred eEEEEECCCCc-h-h----------HHHHHHHHHh--hcccC-CCcEEEEEeCCcc
Confidence 99999998865 2 1 1123333333 58998 9999988876543
No 137
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=95.05 E-value=0.37 Score=38.18 Aligned_cols=106 Identities=16% Similarity=0.099 Sum_probs=68.0
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccC
Q 044601 12 YSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRT 91 (213)
Q Consensus 12 y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~ 91 (213)
-.++.+||-||=|.=.++..|++..+....+++.-.+ +++.+ .+..++..+.-.++.+ ..-|+... . ...
T Consensus 75 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~--~~~~~---~a~~~~~~~~~~~v~~-~~~d~~~~---~-~~~ 144 (215)
T 2yxe_A 75 LKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERI--PELAE---KAERTLRKLGYDNVIV-IVGDGTLG---Y-EPL 144 (215)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESC--HHHHH---HHHHHHHHHTCTTEEE-EESCGGGC---C-GGG
T ss_pred CCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCC--HHHHH---HHHHHHHHcCCCCeEE-EECCcccC---C-CCC
Confidence 3567899999999988999999987544677776554 33333 2445554432223333 34455321 1 124
Q ss_pred CcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccC
Q 044601 92 HKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEG 148 (213)
Q Consensus 92 ~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~ 148 (213)
..||.|+.+++.-... ..+..+|+ ++|.+.++...+
T Consensus 145 ~~fD~v~~~~~~~~~~--------------------~~~~~~L~-pgG~lv~~~~~~ 180 (215)
T 2yxe_A 145 APYDRIYTTAAGPKIP--------------------EPLIRQLK-DGGKLLMPVGRY 180 (215)
T ss_dssp CCEEEEEESSBBSSCC--------------------HHHHHTEE-EEEEEEEEESSS
T ss_pred CCeeEEEECCchHHHH--------------------HHHHHHcC-CCcEEEEEECCC
Confidence 6799999997643220 25778998 999999988654
No 138
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=95.03 E-value=0.59 Score=36.77 Aligned_cols=123 Identities=15% Similarity=0.070 Sum_probs=79.0
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccC
Q 044601 12 YSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRT 91 (213)
Q Consensus 12 y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~ 91 (213)
..++.+||=||=|.=.++..|++.. +...++|.-.+ ++..+ .+..|++...-..+. +..-|+...-. ..
T Consensus 38 ~~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~s--~~~~~---~a~~~~~~~~~~~v~-~~~~d~~~~~~----~~ 106 (204)
T 3e05_A 38 LQDDLVMWDIGAGSASVSIEASNLM-PNGRIFALERN--PQYLG---FIRDNLKKFVARNVT-LVEAFAPEGLD----DL 106 (204)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHHC-TTSEEEEEECC--HHHHH---HHHHHHHHHTCTTEE-EEECCTTTTCT----TS
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHC-CCCEEEEEeCC--HHHHH---HHHHHHHHhCCCcEE-EEeCChhhhhh----cC
Confidence 3567899999999888999999885 45677776655 22332 255566554322233 33445543221 12
Q ss_pred CcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCCCCcccHHhHHHHhCc
Q 044601 92 HKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDPYNKWELVKKAEKIGL 165 (213)
Q Consensus 92 ~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py~~W~i~~lA~~~gl 165 (213)
..||.|+.+.+.- -+..++..+..+|+ ++|.+.+..... ...-.+....++.|+
T Consensus 107 ~~~D~i~~~~~~~-----------------~~~~~l~~~~~~Lk-pgG~l~~~~~~~--~~~~~~~~~l~~~g~ 160 (204)
T 3e05_A 107 PDPDRVFIGGSGG-----------------MLEEIIDAVDRRLK-SEGVIVLNAVTL--DTLTKAVEFLEDHGY 160 (204)
T ss_dssp CCCSEEEESCCTT-----------------CHHHHHHHHHHHCC-TTCEEEEEECBH--HHHHHHHHHHHHTTC
T ss_pred CCCCEEEECCCCc-----------------CHHHHHHHHHHhcC-CCeEEEEEeccc--ccHHHHHHHHHHCCC
Confidence 5699999987542 12378889999998 999999875432 123345567778887
No 139
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=95.03 E-value=0.83 Score=39.56 Aligned_cols=136 Identities=15% Similarity=0.096 Sum_probs=84.1
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCC-CEEEEeeeccccCCCcccc
Q 044601 12 YSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERG-CLVFYGVDAMQMSQHFFLR 90 (213)
Q Consensus 12 y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g-~~V~~gVDAt~L~~~~~l~ 90 (213)
+++..+||=||=|.=.++..|++.+. ...+++ +|- ..+.+ .+..+++...-.+ ++ ...-|+.++. +.
T Consensus 188 ~~~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~--~D~-~~~~~---~a~~~~~~~~~~~~v~-~~~~d~~~~~----~~ 255 (359)
T 1x19_A 188 LDGVKKMIDVGGGIGDISAAMLKHFP-ELDSTI--LNL-PGAID---LVNENAAEKGVADRMR-GIAVDIYKES----YP 255 (359)
T ss_dssp CTTCCEEEEESCTTCHHHHHHHHHCT-TCEEEE--EEC-GGGHH---HHHHHHHHTTCTTTEE-EEECCTTTSC----CC
T ss_pred CCCCCEEEEECCcccHHHHHHHHHCC-CCeEEE--Eec-HHHHH---HHHHHHHhcCCCCCEE-EEeCccccCC----CC
Confidence 46778999999999999999999873 445554 465 44433 2444444321112 33 3445766541 12
Q ss_pred CCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEecc---------------------CC
Q 044601 91 THKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKE---------------------GD 149 (213)
Q Consensus 91 ~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~---------------------~~ 149 (213)
.+|.|+.++..-.. ...-...+++.+..+|+ |+|.+.|.-.. +.
T Consensus 256 --~~D~v~~~~vlh~~------------~d~~~~~~l~~~~~~L~-pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~g~ 320 (359)
T 1x19_A 256 --EADAVLFCRILYSA------------NEQLSTIMCKKAFDAMR-SGGRLLILDMVIDDPENPNFDYLSHYILGAGMPF 320 (359)
T ss_dssp --CCSEEEEESCGGGS------------CHHHHHHHHHHHHTTCC-TTCEEEEEEECCCCTTSCCHHHHHHHGGGGGSSC
T ss_pred --CCCEEEEechhccC------------CHHHHHHHHHHHHHhcC-CCCEEEEEecccCCCCCchHHHHHHHHHhcCCCC
Confidence 23999987653322 11335578899999998 99998665311 11
Q ss_pred C----CCcccHHhHHHHhCcEEEEEeecC
Q 044601 150 P----YNKWELVKKAEKIGLTLQEVVPFC 174 (213)
Q Consensus 150 p----y~~W~i~~lA~~~gl~l~~~~~F~ 174 (213)
. ++.=++..+.+++||...+..+..
T Consensus 321 ~~~~~~t~~e~~~ll~~aGf~~v~~~~~~ 349 (359)
T 1x19_A 321 SVLGFKEQARYKEILESLGYKDVTMVRKY 349 (359)
T ss_dssp CCCCCCCGGGHHHHHHHHTCEEEEEEEET
T ss_pred cccCCCCHHHHHHHHHHCCCceEEEEecC
Confidence 1 333345567788899888876653
No 140
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=94.90 E-value=0.17 Score=39.94 Aligned_cols=127 Identities=17% Similarity=0.154 Sum_probs=73.2
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCCc
Q 044601 14 SKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTHK 93 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~~ 93 (213)
++.+||=+|=|.=.++..|++. + ...++|.-.+. ...+ .+..|++...- ++.+ ..-|+.++. ..
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~~-~-~~~v~~vD~~~--~~~~---~a~~~~~~~~~-~~~~-~~~d~~~~~-------~~ 112 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALLL-G-AKEVICVEVDK--EAVD---VLIENLGEFKG-KFKV-FIGDVSEFN-------SR 112 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT-T-CSEEEEEESCH--HHHH---HHHHHTGGGTT-SEEE-EESCGGGCC-------CC
T ss_pred CcCEEEEeeCCCCHHHHHHHHc-C-CCEEEEEECCH--HHHH---HHHHHHHHcCC-CEEE-EECchHHcC-------CC
Confidence 5789999998888888888876 3 34677666552 2222 13444332211 3333 344777652 37
Q ss_pred ccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCCCCcccHHhHHHHhCcEEEEEeec
Q 044601 94 FDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDPYNKWELVKKAEKIGLTLQEVVPF 173 (213)
Q Consensus 94 FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py~~W~i~~lA~~~gl~l~~~~~F 173 (213)
||.|+.|.|..-... .+...|+..+..++ |.+.+... ..+...-.+...+++.|+.+....++
T Consensus 113 ~D~v~~~~p~~~~~~------------~~~~~~l~~~~~~l----~~~~~~~~-~~~~~~~~~~~~l~~~g~~~~~~~~~ 175 (207)
T 1wy7_A 113 VDIVIMNPPFGSQRK------------HADRPFLLKAFEIS----DVVYSIHL-AKPEVRRFIEKFSWEHGFVVTHRLTT 175 (207)
T ss_dssp CSEEEECCCCSSSST------------TTTHHHHHHHHHHC----SEEEEEEE-CCHHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred CCEEEEcCCCccccC------------CchHHHHHHHHHhc----CcEEEEEe-CCcCCHHHHHHHHHHCCCeEEEEEEE
Confidence 999999999433211 11234566666666 45555441 12223333556777889877655444
No 141
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=94.89 E-value=0.1 Score=41.94 Aligned_cols=104 Identities=20% Similarity=0.204 Sum_probs=65.6
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccC
Q 044601 12 YSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRT 91 (213)
Q Consensus 12 y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~ 91 (213)
..+..+||=||=|.=.++..|++. ..+++.-.+ +++.+ .+..++.... ..+.+ ...|+.++. + .
T Consensus 31 ~~~~~~vLdiG~G~G~~~~~l~~~----~~v~~vD~s--~~~~~---~a~~~~~~~~-~~~~~-~~~d~~~~~----~-~ 94 (243)
T 3d2l_A 31 VEPGKRIADIGCGTGTATLLLADH----YEVTGVDLS--EEMLE---IAQEKAMETN-RHVDF-WVQDMRELE----L-P 94 (243)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT----SEEEEEESC--HHHHH---HHHHHHHHTT-CCCEE-EECCGGGCC----C-S
T ss_pred cCCCCeEEEecCCCCHHHHHHhhC----CeEEEEECC--HHHHH---HHHHhhhhcC-CceEE-EEcChhhcC----C-C
Confidence 445689999999988888888765 355555443 33332 1344433221 23444 345776653 2 2
Q ss_pred CcccEEEEcC---CcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEe
Q 044601 92 HKFDRVIYNF---PHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTH 145 (213)
Q Consensus 92 ~~FDrIiFNF---PH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl 145 (213)
..||.|+.++ .|+. +..-+..+++.+..+|+ |+|.+.++.
T Consensus 95 ~~fD~v~~~~~~~~~~~-------------~~~~~~~~l~~~~~~L~-pgG~l~~~~ 137 (243)
T 3d2l_A 95 EPVDAITILCDSLNYLQ-------------TEADVKQTFDSAARLLT-DGGKLLFDV 137 (243)
T ss_dssp SCEEEEEECTTGGGGCC-------------SHHHHHHHHHHHHHHEE-EEEEEEEEE
T ss_pred CCcCEEEEeCCchhhcC-------------CHHHHHHHHHHHHHhcC-CCeEEEEEc
Confidence 6799999865 3332 12334578889999998 999998864
No 142
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=94.87 E-value=0.48 Score=41.25 Aligned_cols=148 Identities=12% Similarity=0.022 Sum_probs=89.3
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCC
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTH 92 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~ 92 (213)
.++++||=+|=|-=+.|..||+..+....|+|.-.+ .+.+. .+.+|++.+.-.++. +..-|+.++..... ...
T Consensus 101 ~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~-~~~l~----~~~~n~~r~g~~~v~-~~~~D~~~~~~~~~-~~~ 173 (309)
T 2b9e_A 101 PPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLD-AKRLA----SMATLLARAGVSCCE-LAEEDFLAVSPSDP-RYH 173 (309)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESC-HHHHH----HHHHHHHHTTCCSEE-EEECCGGGSCTTCG-GGT
T ss_pred CCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCC-HHHHH----HHHHHHHHcCCCeEE-EEeCChHhcCcccc-ccC
Confidence 457899988777778888888877545678877665 22222 255666544322333 45568888754321 125
Q ss_pred cccEEEEcCCcCCCcccc---c-------chHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCC-CCcccHHhHHH
Q 044601 93 KFDRVIYNFPHVGFIFRE---N-------SYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDP-YNKWELVKKAE 161 (213)
Q Consensus 93 ~FDrIiFNFPH~G~~~~e---~-------~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~p-y~~W~i~~lA~ 161 (213)
.||+|+.|=|..|.+... + ....+.....+-...+..|..+++ +|.+..+-|+-.| -+..+|..+.+
T Consensus 174 ~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~--gG~lvYsTCs~~~~Ene~~v~~~l~ 251 (309)
T 2b9e_A 174 EVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS--LQRLVYSTCSLCQEENEDVVRDALQ 251 (309)
T ss_dssp TEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT--CCEEEEEESCCCGGGTHHHHHHHHT
T ss_pred CCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC--CCEEEEECCCCChHHhHHHHHHHHH
Confidence 799999999998864210 1 011233344566778888988884 7887776665444 35566666444
Q ss_pred H-hC-cEEEE
Q 044601 162 K-IG-LTLQE 169 (213)
Q Consensus 162 ~-~g-l~l~~ 169 (213)
+ .+ +.+..
T Consensus 252 ~~~~~~~~~~ 261 (309)
T 2b9e_A 252 QNPGAFRLAP 261 (309)
T ss_dssp TSTTTEEECC
T ss_pred hCCCcEEEec
Confidence 4 45 76653
No 143
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=94.85 E-value=0.13 Score=45.24 Aligned_cols=106 Identities=18% Similarity=0.228 Sum_probs=69.7
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCC
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTH 92 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~ 92 (213)
.++.+||=||=|.=.++..|+++ + ...|+|.-.. + +.+ .+..+++...-.+..-+..-|+.++. +...
T Consensus 65 ~~~~~VLDvGcG~G~~~~~la~~-g-~~~v~gvD~s--~-~l~---~a~~~~~~~~~~~~v~~~~~d~~~~~----~~~~ 132 (349)
T 3q7e_A 65 FKDKVVLDVGSGTGILCMFAAKA-G-ARKVIGIECS--S-ISD---YAVKIVKANKLDHVVTIIKGKVEEVE----LPVE 132 (349)
T ss_dssp HTTCEEEEESCTTSHHHHHHHHT-T-CSEEEEEECS--T-HHH---HHHHHHHHTTCTTTEEEEESCTTTCC----CSSS
T ss_pred CCCCEEEEEeccchHHHHHHHHC-C-CCEEEEECcH--H-HHH---HHHHHHHHcCCCCcEEEEECcHHHcc----CCCC
Confidence 45789999999988888888887 3 5588887665 2 332 24444443222222345566777762 3357
Q ss_pred cccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEE
Q 044601 93 KFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIH 142 (213)
Q Consensus 93 ~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ih 142 (213)
+||.|+.+.+..... +...+..++..+..+|+ |+|.+.
T Consensus 133 ~fD~Iis~~~~~~l~-----------~~~~~~~~l~~~~r~Lk-pgG~li 170 (349)
T 3q7e_A 133 KVDIIISEWMGYCLF-----------YESMLNTVLHARDKWLA-PDGLIF 170 (349)
T ss_dssp CEEEEEECCCBBTBT-----------BTCCHHHHHHHHHHHEE-EEEEEE
T ss_pred ceEEEEEcccccccc-----------CchhHHHHHHHHHHhCC-CCCEEc
Confidence 899999997644431 12334577888889998 999864
No 144
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=94.83 E-value=0.76 Score=38.38 Aligned_cols=111 Identities=16% Similarity=0.091 Sum_probs=72.0
Q ss_pred ccCCCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEE-EEeeeccccCCCc
Q 044601 9 SNHYSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLV-FYGVDAMQMSQHF 87 (213)
Q Consensus 9 ~~~y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V-~~gVDAt~L~~~~ 87 (213)
+....+..+||=||=|.=.++..|++.++.+..++++-++. ..+.. +..++ +..+..| ...-|+.++.
T Consensus 17 ~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~-~~~~~----a~~~~---~~~~~~v~~~~~d~~~~~--- 85 (284)
T 3gu3_A 17 VWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGE-TLLAE----ARELF---RLLPYDSEFLEGDATEIE--- 85 (284)
T ss_dssp TSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCH-HHHHH----HHHHH---HSSSSEEEEEESCTTTCC---
T ss_pred HhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCH-HHHHH----HHHHH---HhcCCceEEEEcchhhcC---
Confidence 33456789999999999999999998875457887775542 22211 23222 3344344 3345666543
Q ss_pred cccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEecc
Q 044601 88 FLRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKE 147 (213)
Q Consensus 88 ~l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~ 147 (213)
. ...||.|+.+...--. .+ ...+++.+..+|+ |+|.+.+.-..
T Consensus 86 -~-~~~fD~v~~~~~l~~~---~~-----------~~~~l~~~~~~Lk-pgG~l~~~~~~ 128 (284)
T 3gu3_A 86 -L-NDKYDIAICHAFLLHM---TT-----------PETMLQKMIHSVK-KGGKIICFEPH 128 (284)
T ss_dssp -C-SSCEEEEEEESCGGGC---SS-----------HHHHHHHHHHTEE-EEEEEEEEECC
T ss_pred -c-CCCeeEEEECChhhcC---CC-----------HHHHHHHHHHHcC-CCCEEEEEecc
Confidence 1 3589999998752221 11 1377888899998 99998876543
No 145
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=94.83 E-value=0.37 Score=42.39 Aligned_cols=132 Identities=17% Similarity=0.051 Sum_probs=83.7
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCC
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTH 92 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~ 92 (213)
.+..+||=+|=|.=.|+.++++..+...+|+|.-.|.... + -+ .++.+ +.-|+.... ...
T Consensus 38 ~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~--~---~a---------~~~~~-~~~D~~~~~-----~~~ 97 (421)
T 2ih2_A 38 PRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKAL--D---LP---------PWAEG-ILADFLLWE-----PGE 97 (421)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTC--C---CC---------TTEEE-EESCGGGCC-----CSS
T ss_pred CCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHH--H---hC---------CCCcE-EeCChhhcC-----ccC
Confidence 3467999999999999999999875567898888875321 1 11 23333 344665532 136
Q ss_pred cccEEEEcCCcCCCccccc----chHHHHh-----------hHHHHHHHHHHHHhhcccCCCeEEEEeccCCCC--Cccc
Q 044601 93 KFDRVIYNFPHVGFIFREN----SYCQIQL-----------NKELVKGFLRNAKLLLKEENGEIHVTHKEGDPY--NKWE 155 (213)
Q Consensus 93 ~FDrIiFNFPH~G~~~~e~----~~~~i~~-----------n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py--~~W~ 155 (213)
+||.||-|=|......... .....+. ...+...|++.+..+|+ ++|.+.+.+..+--. ..=.
T Consensus 98 ~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk-~~G~~~~i~p~~~l~~~~~~~ 176 (421)
T 2ih2_A 98 AFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLK-PGGVLVFVVPATWLVLEDFAL 176 (421)
T ss_dssp CEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEE-EEEEEEEEEEGGGGTCGGGHH
T ss_pred CCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhC-CCCEEEEEEChHHhcCccHHH
Confidence 7999999999877533100 0011111 11256689999999998 999988887654110 1123
Q ss_pred HHhHHHHhCc
Q 044601 156 LVKKAEKIGL 165 (213)
Q Consensus 156 i~~lA~~~gl 165 (213)
+.+...+.++
T Consensus 177 lr~~l~~~~~ 186 (421)
T 2ih2_A 177 LREFLAREGK 186 (421)
T ss_dssp HHHHHHHHSE
T ss_pred HHHHHHhcCC
Confidence 5566666776
No 146
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=94.82 E-value=0.12 Score=42.13 Aligned_cols=149 Identities=15% Similarity=0.088 Sum_probs=84.9
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCH--HHHHhhcchH---------HHHHHHHHhC-----------
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQ--ETIANKYSNA---------VDNVRELEER----------- 70 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~--~~l~~kY~~a---------~~ni~~L~~~----------- 70 (213)
.++.+||=||=|.=.++..|++.. ...|+++-+... +.+.++.+.. ...+..++..
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 132 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACES--FTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKL 132 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGT--EEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhcc--cCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHh
Confidence 456899999988866666666542 236776655421 1111111110 0011111111
Q ss_pred --CCEEEEeeeccccCCCccccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccC
Q 044601 71 --GCLVFYGVDAMQMSQHFFLRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEG 148 (213)
Q Consensus 71 --g~~V~~gVDAt~L~~~~~l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~ 148 (213)
.+.-....|++++..........||.|+.++-.-. +..+..-...+++.+..+|+ |+|.+.++...+
T Consensus 133 ~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~----------~~~~~~~~~~~l~~~~~~Lk-pgG~li~~~~~~ 201 (265)
T 2i62_A 133 RRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDA----------ACPDLPAYRTALRNLGSLLK-PGGFLVMVDALK 201 (265)
T ss_dssp HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHH----------HCSSHHHHHHHHHHHHTTEE-EEEEEEEEEESS
T ss_pred hhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhh----------hcCChHHHHHHHHHHHhhCC-CCcEEEEEecCC
Confidence 13135567888765322223378999998864221 11123345678888999998 999988876432
Q ss_pred CC-------------CCcccHHhHHHHhCcEEEEEeecC
Q 044601 149 DP-------------YNKWELVKKAEKIGLTLQEVVPFC 174 (213)
Q Consensus 149 ~p-------------y~~W~i~~lA~~~gl~l~~~~~F~ 174 (213)
.. ++.=.+..+.+++||.+++.....
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 240 (265)
T 2i62_A 202 SSYYMIGEQKFSSLPLGWETVRDAVEEAGYTIEQFEVIS 240 (265)
T ss_dssp CCEEEETTEEEECCCCCHHHHHHHHHHTTCEEEEEEEEC
T ss_pred CceEEcCCccccccccCHHHHHHHHHHCCCEEEEEEEec
Confidence 21 122256778889999998887654
No 147
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=94.77 E-value=0.27 Score=39.60 Aligned_cols=112 Identities=10% Similarity=0.008 Sum_probs=69.6
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhC-CCEEEEeeeccccCCCcc--c
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEER-GCLVFYGVDAMQMSQHFF--L 89 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~-g~~V~~gVDAt~L~~~~~--l 89 (213)
.+.++||=||=|.=..+..||+.++.+..|++.-.+ ++..+ .+..|++.+.-. .++ +..-|+...-.... .
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~--~~~~~---~a~~~~~~~~~~~~v~-~~~~d~~~~l~~~~~~~ 130 (221)
T 3u81_A 57 YSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEIN--PDCAA---ITQQMLNFAGLQDKVT-ILNGASQDLIPQLKKKY 130 (221)
T ss_dssp HCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESC--HHHHH---HHHHHHHHHTCGGGEE-EEESCHHHHGGGTTTTS
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCC--hHHHH---HHHHHHHHcCCCCceE-EEECCHHHHHHHHHHhc
Confidence 467899999999888999999887556677766555 33333 256666654322 243 34557755322211 1
Q ss_pred cCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEec
Q 044601 90 RTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHK 146 (213)
Q Consensus 90 ~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~ 146 (213)
....||.|+.+.++... .-...++..+ .+|+ |+|.|.+.-.
T Consensus 131 ~~~~fD~V~~d~~~~~~--------------~~~~~~~~~~-~~Lk-pgG~lv~~~~ 171 (221)
T 3u81_A 131 DVDTLDMVFLDHWKDRY--------------LPDTLLLEKC-GLLR-KGTVLLADNV 171 (221)
T ss_dssp CCCCCSEEEECSCGGGH--------------HHHHHHHHHT-TCCC-TTCEEEESCC
T ss_pred CCCceEEEEEcCCcccc--------------hHHHHHHHhc-cccC-CCeEEEEeCC
Confidence 12689999988644321 1122566667 8998 9998877543
No 148
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=94.77 E-value=0.045 Score=43.57 Aligned_cols=108 Identities=13% Similarity=0.123 Sum_probs=70.5
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccC
Q 044601 12 YSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRT 91 (213)
Q Consensus 12 y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~ 91 (213)
-.+..+||=||=|.=.++..|++.. ..+++.-.+ +++.+. +..++ +..+..-....|+.++. ..
T Consensus 49 ~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s--~~~~~~---a~~~~---~~~~~~~~~~~d~~~~~-----~~ 112 (216)
T 3ofk_A 49 SGAVSNGLEIGCAAGAFTEKLAPHC---KRLTVIDVM--PRAIGR---ACQRT---KRWSHISWAATDILQFS-----TA 112 (216)
T ss_dssp TSSEEEEEEECCTTSHHHHHHGGGE---EEEEEEESC--HHHHHH---HHHHT---TTCSSEEEEECCTTTCC-----CS
T ss_pred cCCCCcEEEEcCCCCHHHHHHHHcC---CEEEEEECC--HHHHHH---HHHhc---ccCCCeEEEEcchhhCC-----CC
Confidence 3456899999999999999998763 366665443 222221 22222 22333345667887765 25
Q ss_pred CcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEecc
Q 044601 92 HKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKE 147 (213)
Q Consensus 92 ~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~ 147 (213)
..||.|+.+...--. .+...+..++..+..+|+ ++|.+.|+...
T Consensus 113 ~~fD~v~~~~~l~~~-----------~~~~~~~~~l~~~~~~L~-pgG~l~~~~~~ 156 (216)
T 3ofk_A 113 ELFDLIVVAEVLYYL-----------EDMTQMRTAIDNMVKMLA-PGGHLVFGSAR 156 (216)
T ss_dssp CCEEEEEEESCGGGS-----------SSHHHHHHHHHHHHHTEE-EEEEEEEEEEC
T ss_pred CCccEEEEccHHHhC-----------CCHHHHHHHHHHHHHHcC-CCCEEEEEecC
Confidence 789999998543221 122445678999999998 99999987643
No 149
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=94.74 E-value=0.13 Score=42.26 Aligned_cols=102 Identities=12% Similarity=0.120 Sum_probs=65.8
Q ss_pred CeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhC--CCEEEEeeeccccCCCccccCCc
Q 044601 16 QRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEER--GCLVFYGVDAMQMSQHFFLRTHK 93 (213)
Q Consensus 16 ~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~--g~~V~~gVDAt~L~~~~~l~~~~ 93 (213)
.+||=||=|.=..++.||++++.+..|++.-.+ ++..+ -+..|++...-. .++ +..-||.++-.. +....
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~--~~~~~---~a~~~~~~~g~~~~~i~-~~~gda~~~l~~--~~~~~ 129 (221)
T 3dr5_A 58 TGAIAITPAAGLVGLYILNGLADNTTLTCIDPE--SEHQR---QAKALFREAGYSPSRVR-FLLSRPLDVMSR--LANDS 129 (221)
T ss_dssp CEEEEESTTHHHHHHHHHHHSCTTSEEEEECSC--HHHHH---HHHHHHHHTTCCGGGEE-EECSCHHHHGGG--SCTTC
T ss_pred CCEEEEcCCchHHHHHHHHhCCCCCEEEEEECC--HHHHH---HHHHHHHHcCCCcCcEE-EEEcCHHHHHHH--hcCCC
Confidence 499999999989999999988656677665554 33332 255555543211 122 344566654322 22478
Q ss_pred ccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEE
Q 044601 94 FDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHV 143 (213)
Q Consensus 94 FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihv 143 (213)
||.|+.+.+... ...||+.+..+|+ |+|.|.+
T Consensus 130 fD~V~~d~~~~~-----------------~~~~l~~~~~~Lk-pGG~lv~ 161 (221)
T 3dr5_A 130 YQLVFGQVSPMD-----------------LKALVDAAWPLLR-RGGALVL 161 (221)
T ss_dssp EEEEEECCCTTT-----------------HHHHHHHHHHHEE-EEEEEEE
T ss_pred cCeEEEcCcHHH-----------------HHHHHHHHHHHcC-CCcEEEE
Confidence 999988753211 1258888999998 9998877
No 150
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=94.73 E-value=0.17 Score=44.23 Aligned_cols=106 Identities=19% Similarity=0.219 Sum_probs=69.0
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccC
Q 044601 12 YSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRT 91 (213)
Q Consensus 12 y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~ 91 (213)
..++.+||=||=|.=.++..|++. + ...++|.-.. + +.+ .+.++++...-....-+..-|+.++. +..
T Consensus 62 ~~~~~~VLDiGcGtG~ls~~la~~-g-~~~v~gvD~s-~--~~~---~a~~~~~~~~~~~~i~~~~~d~~~~~----~~~ 129 (340)
T 2fyt_A 62 IFKDKVVLDVGCGTGILSMFAAKA-G-AKKVLGVDQS-E--ILY---QAMDIIRLNKLEDTITLIKGKIEEVH----LPV 129 (340)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHT-T-CSEEEEEESS-T--HHH---HHHHHHHHTTCTTTEEEEESCTTTSC----CSC
T ss_pred hcCCCEEEEeeccCcHHHHHHHHc-C-CCEEEEEChH-H--HHH---HHHHHHHHcCCCCcEEEEEeeHHHhc----CCC
Confidence 356789999999988888888876 3 4588887765 2 333 24555543221112234456777652 334
Q ss_pred CcccEEEEcC-CcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEE
Q 044601 92 HKFDRVIYNF-PHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIH 142 (213)
Q Consensus 92 ~~FDrIiFNF-PH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ih 142 (213)
.+||.||.+. |+.. .+...+..++..+..+|+ |+|.+.
T Consensus 130 ~~~D~Ivs~~~~~~l------------~~~~~~~~~l~~~~~~Lk-pgG~li 168 (340)
T 2fyt_A 130 EKVDVIISEWMGYFL------------LFESMLDSVLYAKNKYLA-KGGSVY 168 (340)
T ss_dssp SCEEEEEECCCBTTB------------TTTCHHHHHHHHHHHHEE-EEEEEE
T ss_pred CcEEEEEEcCchhhc------------cCHHHHHHHHHHHHhhcC-CCcEEE
Confidence 7899999986 3333 222345678888899998 999875
No 151
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=94.72 E-value=0.43 Score=41.18 Aligned_cols=136 Identities=18% Similarity=0.217 Sum_probs=81.6
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhC-CCEEEEeeeccccCCCcccc
Q 044601 12 YSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEER-GCLVFYGVDAMQMSQHFFLR 90 (213)
Q Consensus 12 y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~-g~~V~~gVDAt~L~~~~~l~ 90 (213)
.++..+||=||=|.=.++..|++.+. ...++ ..|- .++.+ .+.+++....-. .+++ ..-|+.+ ..
T Consensus 181 ~~~~~~vLDvG~G~G~~~~~l~~~~~-~~~~~--~~D~-~~~~~---~a~~~~~~~~~~~~v~~-~~~d~~~---~~--- 246 (360)
T 1tw3_A 181 WTNVRHVLDVGGGKGGFAAAIARRAP-HVSAT--VLEM-AGTVD---TARSYLKDEGLSDRVDV-VEGDFFE---PL--- 246 (360)
T ss_dssp CTTCSEEEEETCTTSHHHHHHHHHCT-TCEEE--EEEC-TTHHH---HHHHHHHHTTCTTTEEE-EECCTTS---CC---
T ss_pred CccCcEEEEeCCcCcHHHHHHHHhCC-CCEEE--EecC-HHHHH---HHHHHHHhcCCCCceEE-EeCCCCC---CC---
Confidence 45678999999999999999998863 44444 4554 33333 244444432111 2333 3446543 11
Q ss_pred CCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEecc----CC-----------------
Q 044601 91 THKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKE----GD----------------- 149 (213)
Q Consensus 91 ~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~----~~----------------- 149 (213)
...||.|+.++..--.. ..-...+++.+..+|+ |+|.+.|.-.. ..
T Consensus 247 ~~~~D~v~~~~vl~~~~------------~~~~~~~l~~~~~~L~-pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (360)
T 1tw3_A 247 PRKADAIILSFVLLNWP------------DHDAVRILTRCAEALE-PGGRILIHERDDLHENSFNEQFTELDLRMLVFLG 313 (360)
T ss_dssp SSCEEEEEEESCGGGSC------------HHHHHHHHHHHHHTEE-EEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHS
T ss_pred CCCccEEEEcccccCCC------------HHHHHHHHHHHHHhcC-CCcEEEEEEEeccCCCCCcchhhhccHHHhhhcC
Confidence 12499999876532210 1122467888899998 99998876322 11
Q ss_pred --CCCcccHHhHHHHhCcEEEEEeecC
Q 044601 150 --PYNKWELVKKAEKIGLTLQEVVPFC 174 (213)
Q Consensus 150 --py~~W~i~~lA~~~gl~l~~~~~F~ 174 (213)
.++.=++..+.+++||...+..+..
T Consensus 314 ~~~~t~~e~~~ll~~aGf~~~~~~~~~ 340 (360)
T 1tw3_A 314 GALRTREKWDGLAASAGLVVEEVRQLP 340 (360)
T ss_dssp CCCCBHHHHHHHHHHTTEEEEEEEEEE
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEEeCC
Confidence 1122234567788999998887764
No 152
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=94.68 E-value=0.29 Score=41.14 Aligned_cols=110 Identities=17% Similarity=0.111 Sum_probs=71.3
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHh-CCCEEEEeeeccccCCCc--cc
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEE-RGCLVFYGVDAMQMSQHF--FL 89 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~-~g~~V~~gVDAt~L~~~~--~l 89 (213)
.+..+||=||=|.=.++..|++.+....+++++-.. ...+.. +..+++.... ..-.-....|+.++.... .+
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s-~~~~~~----a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 109 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLS-ATMIKT----AEVIKEGSPDTYKNVSFKISSSDDFKFLGADSV 109 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESC-HHHHHH----HHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTT
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCC-HHHHHH----HHHHHHhccCCCCceEEEEcCHHhCCccccccc
Confidence 468999999999999999999877456788777654 222222 4444444311 122234566887764211 11
Q ss_pred cCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEE
Q 044601 90 RTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHV 143 (213)
Q Consensus 90 ~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihv 143 (213)
..+.||.|+.++..--. -...+++.+..+|+ |+|.+.|
T Consensus 110 ~~~~fD~V~~~~~l~~~---------------~~~~~l~~~~~~Lk-pgG~l~i 147 (299)
T 3g5t_A 110 DKQKIDMITAVECAHWF---------------DFEKFQRSAYANLR-KDGTIAI 147 (299)
T ss_dssp TSSCEEEEEEESCGGGS---------------CHHHHHHHHHHHEE-EEEEEEE
T ss_pred cCCCeeEEeHhhHHHHh---------------CHHHHHHHHHHhcC-CCcEEEE
Confidence 23789999998642111 13478899999998 9999887
No 153
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=94.63 E-value=0.37 Score=37.63 Aligned_cols=115 Identities=10% Similarity=-0.028 Sum_probs=75.0
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCC-CCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCC----
Q 044601 12 YSSKQRILLVGEGDFSFSLCLAREFGF-AHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQH---- 86 (213)
Q Consensus 12 y~~~~~ILlVGEGnFSFS~aLa~~~~~-~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~---- 86 (213)
..++.+||=||=|.=.++..|++..+. ...|+|.-+.... . ..++.++. -|++++...
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~----~------------~~~v~~~~-~d~~~~~~~~~~~ 82 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD----P------------IPNVYFIQ-GEIGKDNMNNIKN 82 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC----C------------CTTCEEEE-CCTTTTSSCCC--
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC----C------------CCCceEEE-ccccchhhhhhcc
Confidence 456789999999999999999988753 4678887666521 0 12455543 477665310
Q ss_pred -----------------ccccCCcccEEEEcCC-cCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccC
Q 044601 87 -----------------FFLRTHKFDRVIYNFP-HVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEG 148 (213)
Q Consensus 87 -----------------~~l~~~~FDrIiFNFP-H~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~ 148 (213)
..+....||.|+.|.+ |..+... ........+....+..+..+|+ |+|.+.++...+
T Consensus 83 ~~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~----~d~~~~~~~~~~~l~~~~~~Lk-pgG~lv~~~~~~ 157 (201)
T 2plw_A 83 INYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKI----DDHLNSCELTLSITHFMEQYIN-IGGTYIVKMYLG 157 (201)
T ss_dssp ---------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHH----HHHHHHHHHHHHHHHHHHHHEE-EEEEEEEEEECS
T ss_pred ccccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcc----cCHHHHHHHHHHHHHHHHHHcc-CCCEEEEEEeCC
Confidence 0023468999999874 4332110 1122334567788999999998 999998877554
No 154
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=94.62 E-value=0.96 Score=38.65 Aligned_cols=135 Identities=14% Similarity=0.062 Sum_probs=82.3
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHh-CCCEEEEeeeccccCCCccccC
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEE-RGCLVFYGVDAMQMSQHFFLRT 91 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~-~g~~V~~gVDAt~L~~~~~l~~ 91 (213)
++..+||=||=|.=.++..|++.+. ...+ |.+|- .++.+ .+..++....- ..++ ...-|+. . ..+
T Consensus 168 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~--~~~D~-~~~~~---~a~~~~~~~~~~~~v~-~~~~d~~--~-~~p--- 233 (332)
T 3i53_A 168 AALGHVVDVGGGSGGLLSALLTAHE-DLSG--TVLDL-QGPAS---AAHRRFLDTGLSGRAQ-VVVGSFF--D-PLP--- 233 (332)
T ss_dssp GGGSEEEEETCTTSHHHHHHHHHCT-TCEE--EEEEC-HHHHH---HHHHHHHHTTCTTTEE-EEECCTT--S-CCC---
T ss_pred CCCCEEEEeCCChhHHHHHHHHHCC-CCeE--EEecC-HHHHH---HHHHhhhhcCcCcCeE-EecCCCC--C-CCC---
Confidence 4568999999999999999999874 4444 45576 44444 24444433211 1122 3334554 1 121
Q ss_pred CcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccC-------------------CCCC
Q 044601 92 HKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEG-------------------DPYN 152 (213)
Q Consensus 92 ~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~-------------------~py~ 152 (213)
..||.|+...-.--. ...-...+++.+..+|+ |+|.+.|.-... ..++
T Consensus 234 ~~~D~v~~~~vlh~~------------~~~~~~~~l~~~~~~L~-pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t 300 (332)
T 3i53_A 234 AGAGGYVLSAVLHDW------------DDLSAVAILRRCAEAAG-SGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERS 300 (332)
T ss_dssp CSCSEEEEESCGGGS------------CHHHHHHHHHHHHHHHT-TTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCC
T ss_pred CCCcEEEEehhhccC------------CHHHHHHHHHHHHHhcC-CCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCC
Confidence 279999987543222 11223467788889998 999988863211 1122
Q ss_pred cccHHhHHHHhCcEEEEEeecC
Q 044601 153 KWELVKKAEKIGLTLQEVVPFC 174 (213)
Q Consensus 153 ~W~i~~lA~~~gl~l~~~~~F~ 174 (213)
.=++..+.+++||...+..+..
T Consensus 301 ~~e~~~ll~~aGf~~~~~~~~~ 322 (332)
T 3i53_A 301 LAELGELAAQAGLAVRAAHPIS 322 (332)
T ss_dssp HHHHHHHHHHTTEEEEEEEECS
T ss_pred HHHHHHHHHHCCCEEEEEEECC
Confidence 2245567888999999887764
No 155
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=94.59 E-value=0.079 Score=43.33 Aligned_cols=109 Identities=18% Similarity=0.147 Sum_probs=67.2
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCC-CEEEEeeeccccCCCcc---
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERG-CLVFYGVDAMQMSQHFF--- 88 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g-~~V~~gVDAt~L~~~~~--- 88 (213)
.+..+||-||=|.=.++..|++.++.+..+++.-.+ +++.+ .+..+++...-.+ +.+ ..-|+...-....
T Consensus 59 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~--~~~~~---~a~~~~~~~g~~~~v~~-~~~d~~~~~~~~~~~~ 132 (239)
T 2hnk_A 59 SGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVS--EEWTN---VARKYWKENGLENKIFL-KLGSALETLQVLIDSK 132 (239)
T ss_dssp HTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESC--HHHHH---HHHHHHHHTTCGGGEEE-EESCHHHHHHHHHHCS
T ss_pred hCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECC--HHHHH---HHHHHHHHcCCCCCEEE-EECCHHHHHHHHHhhc
Confidence 467899999999988999999987545677776555 22222 2444443321111 333 3446654211110
Q ss_pred --------cc-C-CcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEe
Q 044601 89 --------LR-T-HKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTH 145 (213)
Q Consensus 89 --------l~-~-~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl 145 (213)
+. . ..||.|+.+++. + -+..+|..+..+|+ ++|.+.+.-
T Consensus 133 ~~~~~~~~f~~~~~~fD~I~~~~~~------~-----------~~~~~l~~~~~~L~-pgG~lv~~~ 181 (239)
T 2hnk_A 133 SAPSWASDFAFGPSSIDLFFLDADK------E-----------NYPNYYPLILKLLK-PGGLLIADN 181 (239)
T ss_dssp SCCGGGTTTCCSTTCEEEEEECSCG------G-----------GHHHHHHHHHHHEE-EEEEEEEEC
T ss_pred ccccccccccCCCCCcCEEEEeCCH------H-----------HHHHHHHHHHHHcC-CCeEEEEEc
Confidence 11 1 679999988431 0 11267899999998 999988853
No 156
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=94.57 E-value=0.3 Score=41.95 Aligned_cols=104 Identities=18% Similarity=0.138 Sum_probs=67.6
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccC
Q 044601 12 YSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRT 91 (213)
Q Consensus 12 y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~ 91 (213)
-.++++||=||=|.=.++..|++..+....|++.-.+ .+ +.+ .+..+++...-.++.+ ..-|+.++.. ..
T Consensus 73 ~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s-~~-~~~---~a~~~~~~~g~~~v~~-~~~d~~~~~~----~~ 142 (317)
T 1dl5_A 73 LDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYS-RK-ICE---IAKRNVERLGIENVIF-VCGDGYYGVP----EF 142 (317)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESC-HH-HHH---HHHHHHHHTTCCSEEE-EESCGGGCCG----GG
T ss_pred CCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECC-HH-HHH---HHHHHHHHcCCCCeEE-EECChhhccc----cC
Confidence 3567899999999988999999886534568877666 22 222 2555554332223333 3457766421 23
Q ss_pred CcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEec
Q 044601 92 HKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHK 146 (213)
Q Consensus 92 ~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~ 146 (213)
..||+|+.+.|.-... ..+..+|+ |+|.+.|...
T Consensus 143 ~~fD~Iv~~~~~~~~~--------------------~~~~~~Lk-pgG~lvi~~~ 176 (317)
T 1dl5_A 143 SPYDVIFVTVGVDEVP--------------------ETWFTQLK-EGGRVIVPIN 176 (317)
T ss_dssp CCEEEEEECSBBSCCC--------------------HHHHHHEE-EEEEEEEEBC
T ss_pred CCeEEEEEcCCHHHHH--------------------HHHHHhcC-CCcEEEEEEC
Confidence 6799999997754321 24567898 9999998853
No 157
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=94.50 E-value=0.26 Score=41.03 Aligned_cols=103 Identities=17% Similarity=0.100 Sum_probs=66.5
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEE-EEeeeccccCCCccccCC
Q 044601 14 SKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLV-FYGVDAMQMSQHFFLRTH 92 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V-~~gVDAt~L~~~~~l~~~ 92 (213)
+..+||=||=|.=.++..|++. +.++++.-.+ +...+ .+..++ +..|..| ....|+.++.. ..
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~---g~~v~~vD~s--~~~~~---~a~~~~---~~~~~~~~~~~~d~~~~~~-----~~ 183 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLL---GYDVTSWDHN--ENSIA---FLNETK---EKENLNISTALYDINAANI-----QE 183 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHT---TCEEEEEESC--HHHHH---HHHHHH---HHTTCCEEEEECCGGGCCC-----CS
T ss_pred CCCcEEEECCCCCHHHHHHHHC---CCeEEEEECC--HHHHH---HHHHHH---HHcCCceEEEEeccccccc-----cC
Confidence 6789999999998999999877 3466665544 22222 133333 3344322 34457766542 57
Q ss_pred cccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEe
Q 044601 93 KFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTH 145 (213)
Q Consensus 93 ~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl 145 (213)
.||.|+.+.+..-. +...+..+++.+..+|+ ++|.+.|..
T Consensus 184 ~fD~i~~~~~~~~~------------~~~~~~~~l~~~~~~Lk-pgG~l~i~~ 223 (286)
T 3m70_A 184 NYDFIVSTVVFMFL------------NRERVPSIIKNMKEHTN-VGGYNLIVA 223 (286)
T ss_dssp CEEEEEECSSGGGS------------CGGGHHHHHHHHHHTEE-EEEEEEEEE
T ss_pred CccEEEEccchhhC------------CHHHHHHHHHHHHHhcC-CCcEEEEEE
Confidence 89999998754321 11234578899999998 999966543
No 158
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=94.44 E-value=0.081 Score=42.52 Aligned_cols=109 Identities=16% Similarity=0.103 Sum_probs=67.8
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHh-CCCEEEEeeeccccCCCcccc
Q 044601 12 YSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEE-RGCLVFYGVDAMQMSQHFFLR 90 (213)
Q Consensus 12 y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~-~g~~V~~gVDAt~L~~~~~l~ 90 (213)
..+..+||=||=|.=.++..|++.++....|++.-.+.. ..+ .+.++++...- ..+.++ .-|+...-......
T Consensus 67 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~--~~~---~a~~~~~~~g~~~~i~~~-~~d~~~~~~~~~~~ 140 (229)
T 2avd_A 67 LIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQ--PPE---LGRPLWRQAEAEHKIDLR-LKPALETLDELLAA 140 (229)
T ss_dssp HTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSH--HHH---HHHHHHHHTTCTTTEEEE-ESCHHHHHHHHHHT
T ss_pred hcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHH--HHH---HHHHHHHHCCCCCeEEEE-EcCHHHHHHHHHhc
Confidence 456789999999988899999988754567877766642 222 23444432211 123333 34664432111101
Q ss_pred C--CcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEE
Q 044601 91 T--HKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVT 144 (213)
Q Consensus 91 ~--~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvT 144 (213)
. ..||.|+.+.|... ...+++.+..+|+ ++|.|.+.
T Consensus 141 ~~~~~~D~v~~d~~~~~-----------------~~~~l~~~~~~L~-pgG~lv~~ 178 (229)
T 2avd_A 141 GEAGTFDVAVVDADKEN-----------------CSAYYERCLQLLR-PGGILAVL 178 (229)
T ss_dssp TCTTCEEEEEECSCSTT-----------------HHHHHHHHHHHEE-EEEEEEEE
T ss_pred CCCCCccEEEECCCHHH-----------------HHHHHHHHHHHcC-CCeEEEEE
Confidence 1 67999999877221 1367888999998 99998773
No 159
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=94.44 E-value=0.36 Score=38.89 Aligned_cols=106 Identities=15% Similarity=0.129 Sum_probs=68.2
Q ss_pred CCCCCCeEEEEecCChhHHHHHHHHhCC-----CCeEEEeccCCHHHHHhhcchHHHHHHHHH-----hCCCEEEEeeec
Q 044601 11 HYSSKQRILLVGEGDFSFSLCLAREFGF-----AHNMVATCLDTQETIANKYSNAVDNVRELE-----ERGCLVFYGVDA 80 (213)
Q Consensus 11 ~y~~~~~ILlVGEGnFSFS~aLa~~~~~-----~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~-----~~g~~V~~gVDA 80 (213)
+..++.+||-||=|.=.++..|++..+. ...+++.-.+ +++.+ .+.+++..+. ...+.+ ..-|+
T Consensus 81 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~--~~~~~---~a~~~~~~~~~~~~~~~~v~~-~~~d~ 154 (227)
T 1r18_A 81 HLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQ--AELVR---RSKANLNTDDRSMLDSGQLLI-VEGDG 154 (227)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESC--HHHHH---HHHHHHHHHHHHHHHHTSEEE-EESCG
T ss_pred hCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcC--HHHHH---HHHHHHHhcCccccCCCceEE-EECCc
Confidence 3456789999999988888889887642 1366665544 33333 2455555433 334544 34566
Q ss_pred cccCCCccccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEecc
Q 044601 81 MQMSQHFFLRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKE 147 (213)
Q Consensus 81 t~L~~~~~l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~ 147 (213)
.+. .. ....||+|+.+.+... +...+..+|+ ++|.+.+++..
T Consensus 155 ~~~--~~--~~~~fD~I~~~~~~~~--------------------~~~~~~~~Lk-pgG~lvi~~~~ 196 (227)
T 1r18_A 155 RKG--YP--PNAPYNAIHVGAAAPD--------------------TPTELINQLA-SGGRLIVPVGP 196 (227)
T ss_dssp GGC--CG--GGCSEEEEEECSCBSS--------------------CCHHHHHTEE-EEEEEEEEESC
T ss_pred ccC--CC--cCCCccEEEECCchHH--------------------HHHHHHHHhc-CCCEEEEEEec
Confidence 551 11 1367999998876432 1255788998 99999999864
No 160
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=94.43 E-value=0.025 Score=51.52 Aligned_cols=120 Identities=17% Similarity=0.223 Sum_probs=69.0
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCH-HHHHhhc-chHHH-HHHHHHhCCCEEEEeeeccccCCCcccc
Q 044601 14 SKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQ-ETIANKY-SNAVD-NVRELEERGCLVFYGVDAMQMSQHFFLR 90 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~-~~l~~kY-~~a~~-ni~~L~~~g~~V~~gVDAt~L~~~~~l~ 90 (213)
+.++||++|=||-+-++.++++ . ...|++--+|.. =++.++| |.... ..+-.+.-.++|+. -||-+--+...-.
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh-~-~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii-~Da~~fl~~~~~~ 281 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKL-K-PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLI-EDCIPVLKRYAKE 281 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTT-C-CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEE-SCHHHHHHHHHHH
T ss_pred CCCeEEEECCCcHHHHHHHHhc-C-CceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeeh-HHHHHHHHhhhhc
Confidence 3589999999999999999986 3 467888777732 2333444 22110 01111122244443 3554422211112
Q ss_pred CCcccEEEEcCCcCCCcccccchHHHHh-hHHHHHHHHHHHHhhcccCCCeEE
Q 044601 91 THKFDRVIYNFPHVGFIFRENSYCQIQL-NKELVKGFLRNAKLLLKEENGEIH 142 (213)
Q Consensus 91 ~~~FDrIiFNFPH~G~~~~e~~~~~i~~-n~~Ll~~Ff~Sa~~~L~~~~G~ih 142 (213)
..+||.||-+.|.....+. .... ....-+.||+.|+..|+ ++|-+.
T Consensus 282 ~~~yDvIIvDl~D~~~s~~-----p~g~a~~Lft~eFy~~~~~~L~-p~GVlv 328 (381)
T 3c6k_A 282 GREFDYVINDLTAVPISTS-----PEEDSTWEFLRLILDLSMKVLK-QDGKYF 328 (381)
T ss_dssp TCCEEEEEEECCSSCCCCC---------CHHHHHHHHHHHHHHTEE-EEEEEE
T ss_pred cCceeEEEECCCCCcccCc-----ccCcchHHHHHHHHHHHHHhcC-CCCEEE
Confidence 4689999999775432110 1122 33446789999999998 888653
No 161
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=94.35 E-value=0.26 Score=43.03 Aligned_cols=102 Identities=21% Similarity=0.225 Sum_probs=69.2
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCC
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTH 92 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~ 92 (213)
.++.+||=+|=|.=.||.. |+ + +..++|.-.+ .+ ..+ .+..|++...-.+....+.-|+.++. .
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~--~-~~~V~~vD~s-~~-ai~---~a~~n~~~n~l~~~v~~~~~D~~~~~-------~ 257 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK--N-AKKIYAIDIN-PH-AIE---LLKKNIKLNKLEHKIIPILSDVREVD-------V 257 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT--T-SSEEEEEESC-HH-HHH---HHHHHHHHTTCTTTEEEEESCGGGCC-------C
T ss_pred CCCCEEEEccCccCHHHHh-cc--C-CCEEEEEECC-HH-HHH---HHHHHHHHcCCCCcEEEEECChHHhc-------C
Confidence 5678999988888888888 76 3 5566665544 22 222 25566654321122345566777653 6
Q ss_pred cccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCC
Q 044601 93 KFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGD 149 (213)
Q Consensus 93 ~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~ 149 (213)
.||.|+.|-|+.+. .|+..+..+|+ ++|.+++..+...
T Consensus 258 ~fD~Vi~dpP~~~~------------------~~l~~~~~~L~-~gG~l~~~~~~~~ 295 (336)
T 2yx1_A 258 KGNRVIMNLPKFAH------------------KFIDKALDIVE-EGGVIHYYTIGKD 295 (336)
T ss_dssp CEEEEEECCTTTGG------------------GGHHHHHHHEE-EEEEEEEEEEESS
T ss_pred CCcEEEECCcHhHH------------------HHHHHHHHHcC-CCCEEEEEEeecC
Confidence 79999999997652 57778889998 9999999877654
No 162
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=94.32 E-value=0.17 Score=40.21 Aligned_cols=103 Identities=14% Similarity=0.085 Sum_probs=66.2
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhC-CCEEEEeeeccccCCCccccC
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEER-GCLVFYGVDAMQMSQHFFLRT 91 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~-g~~V~~gVDAt~L~~~~~l~~ 91 (213)
.+..+||=||=|.=.++..|++.++.+..|++.-.+ ++..+ .+..|++...-. .++ +..-|+..+-... .
T Consensus 55 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~--~~~~~---~a~~~~~~~~~~~~v~-~~~~d~~~~~~~~---~ 125 (210)
T 3c3p_A 55 KQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPD--RDNVE---HARRMLHDNGLIDRVE-LQVGDPLGIAAGQ---R 125 (210)
T ss_dssp HCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESC--HHHHH---HHHHHHHHHSGGGGEE-EEESCHHHHHTTC---C
T ss_pred hCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECC--HHHHH---HHHHHHHHCCCCceEE-EEEecHHHHhccC---C
Confidence 467899999999888899999887545677766554 22222 245555543221 133 3445665542221 2
Q ss_pred CcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEE
Q 044601 92 HKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHV 143 (213)
Q Consensus 92 ~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihv 143 (213)
. ||.|+.+.+... ...+++.+..+|+ ++|.+.+
T Consensus 126 ~-fD~v~~~~~~~~-----------------~~~~l~~~~~~Lk-pgG~lv~ 158 (210)
T 3c3p_A 126 D-IDILFMDCDVFN-----------------GADVLERMNRCLA-KNALLIA 158 (210)
T ss_dssp S-EEEEEEETTTSC-----------------HHHHHHHHGGGEE-EEEEEEE
T ss_pred C-CCEEEEcCChhh-----------------hHHHHHHHHHhcC-CCeEEEE
Confidence 4 999999854211 1368888999998 9998876
No 163
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=94.31 E-value=1.1 Score=35.73 Aligned_cols=125 Identities=11% Similarity=-0.063 Sum_probs=79.9
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhC-CCEEEEeeeccccCCCccccC
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEER-GCLVFYGVDAMQMSQHFFLRT 91 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~-g~~V~~gVDAt~L~~~~~l~~ 91 (213)
.++++||=||=|.=.++..|++. +..|+|.-.+ ++..+ .+..|++.+.-. ++. +..-|+...-. ..
T Consensus 54 ~~~~~vLDlGcG~G~~~~~la~~---~~~v~~vD~s--~~~~~---~a~~~~~~~g~~~~v~-~~~~d~~~~~~----~~ 120 (204)
T 3njr_A 54 RRGELLWDIGGGSGSVSVEWCLA---GGRAITIEPR--ADRIE---NIQKNIDTYGLSPRMR-AVQGTAPAALA----DL 120 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT---TCEEEEEESC--HHHHH---HHHHHHHHTTCTTTEE-EEESCTTGGGT----TS
T ss_pred CCCCEEEEecCCCCHHHHHHHHc---CCEEEEEeCC--HHHHH---HHHHHHHHcCCCCCEE-EEeCchhhhcc----cC
Confidence 46789999999988888888877 4567665544 22332 255555544322 233 33456666211 12
Q ss_pred CcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCCCCcccHHhHHHHhCcEEEEEe
Q 044601 92 HKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDPYNKWELVKKAEKIGLTLQEVV 171 (213)
Q Consensus 92 ~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py~~W~i~~lA~~~gl~l~~~~ 171 (213)
..||.|+.+. +. + .. ++..+..+|+ ++|.+.+..... -+...+....++.|+.+.+..
T Consensus 121 ~~~D~v~~~~---~~------------~---~~-~l~~~~~~Lk-pgG~lv~~~~~~--~~~~~~~~~l~~~g~~i~~i~ 178 (204)
T 3njr_A 121 PLPEAVFIGG---GG------------S---QA-LYDRLWEWLA-PGTRIVANAVTL--ESETLLTQLHARHGGQLLRID 178 (204)
T ss_dssp CCCSEEEECS---CC------------C---HH-HHHHHHHHSC-TTCEEEEEECSH--HHHHHHHHHHHHHCSEEEEEE
T ss_pred CCCCEEEECC---cc------------c---HH-HHHHHHHhcC-CCcEEEEEecCc--ccHHHHHHHHHhCCCcEEEEE
Confidence 4699999765 21 1 23 7888889998 999998887542 344556667777888877764
Q ss_pred e
Q 044601 172 P 172 (213)
Q Consensus 172 ~ 172 (213)
.
T Consensus 179 ~ 179 (204)
T 3njr_A 179 I 179 (204)
T ss_dssp E
T ss_pred e
Confidence 4
No 164
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=94.29 E-value=0.63 Score=38.56 Aligned_cols=128 Identities=19% Similarity=0.107 Sum_probs=80.5
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCC
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTH 92 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~ 92 (213)
.+..+||=||=|.=.++..|++ .+..++++-.. . ++.+. +..++ .++.+. ..|+..+. . ..
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s-~-~~~~~---a~~~~-----~~~~~~-~~d~~~~~----~-~~ 116 (279)
T 3ccf_A 56 QPGEFILDLGCGTGQLTEKIAQ---SGAEVLGTDNA-A-TMIEK---ARQNY-----PHLHFD-VADARNFR----V-DK 116 (279)
T ss_dssp CTTCEEEEETCTTSHHHHHHHH---TTCEEEEEESC-H-HHHHH---HHHHC-----TTSCEE-ECCTTTCC----C-SS
T ss_pred CCCCEEEEecCCCCHHHHHHHh---CCCeEEEEECC-H-HHHHH---HHhhC-----CCCEEE-ECChhhCC----c-CC
Confidence 4568999999999889999987 24577766544 2 22221 22221 244443 45777654 2 36
Q ss_pred cccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCC----------------------
Q 044601 93 KFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDP---------------------- 150 (213)
Q Consensus 93 ~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~p---------------------- 150 (213)
.||.|+.++..--.. + ...+++.+..+|+ |+|.+.++......
T Consensus 117 ~fD~v~~~~~l~~~~-----------d---~~~~l~~~~~~Lk-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (279)
T 3ccf_A 117 PLDAVFSNAMLHWVK-----------E---PEAAIASIHQALK-SGGRFVAEFGGKGNIKYILEALYNALETLGIHNPQA 181 (279)
T ss_dssp CEEEEEEESCGGGCS-----------C---HHHHHHHHHHHEE-EEEEEEEEEECTTTTHHHHHHHHHHHHHHTCCCGGG
T ss_pred CcCEEEEcchhhhCc-----------C---HHHHHHHHHHhcC-CCcEEEEEecCCcchHHHHHHHHHHHHhcCCccccC
Confidence 899999986532211 0 1367888999998 99999887643211
Q ss_pred ---CCcc---cHHhHHHHhCcEEEEEeecC
Q 044601 151 ---YNKW---ELVKKAEKIGLTLQEVVPFC 174 (213)
Q Consensus 151 ---y~~W---~i~~lA~~~gl~l~~~~~F~ 174 (213)
+..+ .+..+.+++||..+....+.
T Consensus 182 ~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 211 (279)
T 3ccf_A 182 LNPWYFPSIGEYVNILEKQGFDVTYAALFN 211 (279)
T ss_dssp GCCCCCCCHHHHHHHHHHHTEEEEEEEEEE
T ss_pred cCceeCCCHHHHHHHHHHcCCEEEEEEEec
Confidence 0111 24567788999988776554
No 165
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=94.27 E-value=2.2 Score=37.23 Aligned_cols=136 Identities=17% Similarity=0.142 Sum_probs=82.1
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccC
Q 044601 12 YSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRT 91 (213)
Q Consensus 12 y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~ 91 (213)
+++..+||=||=|.=.++..|++++. ...+ |.+|- .++.+ .+..++....-.+-.-...-|.. ...+
T Consensus 200 ~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~--~~~D~-~~~~~---~a~~~~~~~~l~~~v~~~~~d~~---~~~p--- 266 (369)
T 3gwz_A 200 FSGAATAVDIGGGRGSLMAAVLDAFP-GLRG--TLLER-PPVAE---EARELLTGRGLADRCEILPGDFF---ETIP--- 266 (369)
T ss_dssp CTTCSEEEEETCTTSHHHHHHHHHCT-TCEE--EEEEC-HHHHH---HHHHHHHHTTCTTTEEEEECCTT---TCCC---
T ss_pred CccCcEEEEeCCCccHHHHHHHHHCC-CCeE--EEEcC-HHHHH---HHHHhhhhcCcCCceEEeccCCC---CCCC---
Confidence 45678999999999999999999863 4455 55565 44443 24444433211111223344554 1111
Q ss_pred CcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCC---------------------C
Q 044601 92 HKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGD---------------------P 150 (213)
Q Consensus 92 ~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~---------------------p 150 (213)
..||.|+.....--.. ..-...+++.+..+|+ |+|.+.|.-.... .
T Consensus 267 ~~~D~v~~~~vlh~~~------------d~~~~~~L~~~~~~L~-pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~ 333 (369)
T 3gwz_A 267 DGADVYLIKHVLHDWD------------DDDVVRILRRIATAMK-PDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAE 333 (369)
T ss_dssp SSCSEEEEESCGGGSC------------HHHHHHHHHHHHTTCC-TTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCC
T ss_pred CCceEEEhhhhhccCC------------HHHHHHHHHHHHHHcC-CCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCcc
Confidence 2799999876543221 1223367888899998 9999887532211 1
Q ss_pred CCcccHHhHHHHhCcEEEEEeec
Q 044601 151 YNKWELVKKAEKIGLTLQEVVPF 173 (213)
Q Consensus 151 y~~W~i~~lA~~~gl~l~~~~~F 173 (213)
++.=++..+.+++||...+..+.
T Consensus 334 ~t~~e~~~ll~~aGf~~~~~~~~ 356 (369)
T 3gwz_A 334 RSESEFAALLEKSGLRVERSLPC 356 (369)
T ss_dssp BCHHHHHHHHHTTTEEEEEEEEC
T ss_pred CCHHHHHHHHHHCCCeEEEEEEC
Confidence 22223456778889999888763
No 166
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=94.22 E-value=0.32 Score=38.90 Aligned_cols=110 Identities=15% Similarity=0.173 Sum_probs=62.8
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCCc
Q 044601 14 SKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTHK 93 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~~ 93 (213)
++.+||=+|=|.=.++..+++.. ...|+|.-.+ +++.+ .+..|++...-..++ +..-|+.+.... ....
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~--~~~V~~vD~s--~~~l~---~a~~~~~~~~~~~v~-~~~~D~~~~~~~---~~~~ 122 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRY--AAGATLIEMD--RAVSQ---QLIKNLATLKAGNAR-VVNSNAMSFLAQ---KGTP 122 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT--CSEEEEECSC--HHHHH---HHHHHHHHTTCCSEE-EECSCHHHHHSS---CCCC
T ss_pred CCCeEEEeCCCcCHHHHHHHhcC--CCEEEEEECC--HHHHH---HHHHHHHHcCCCcEE-EEECCHHHHHhh---cCCC
Confidence 56889988777666777666542 3456554443 33333 245555443221233 445577663211 2467
Q ss_pred ccEEEEcCC-cCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCC
Q 044601 94 FDRVIYNFP-HVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGD 149 (213)
Q Consensus 94 FDrIiFNFP-H~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~ 149 (213)
||.|+.|.| |.+ ....++..+.+ ..+|+ ++|.+.|+.....
T Consensus 123 fD~V~~~~p~~~~------------~~~~~l~~l~~--~~~L~-pgG~l~i~~~~~~ 164 (202)
T 2fpo_A 123 HNIVFVDPPFRRG------------LLEETINLLED--NGWLA-DEALIYVESEVEN 164 (202)
T ss_dssp EEEEEECCSSSTT------------THHHHHHHHHH--TTCEE-EEEEEEEEEEGGG
T ss_pred CCEEEECCCCCCC------------cHHHHHHHHHh--cCccC-CCcEEEEEECCCc
Confidence 999999999 422 11233333322 34688 9999998886544
No 167
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=93.98 E-value=0.067 Score=44.55 Aligned_cols=109 Identities=13% Similarity=0.122 Sum_probs=70.1
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccc--c
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFL--R 90 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l--~ 90 (213)
.+.++||=||=|.=..++.||+.++.+..|++.-.+.+ ....+..|++.+.-..-.-+..-||..+-....- .
T Consensus 59 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~-----~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~ 133 (242)
T 3r3h_A 59 TRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEG-----WTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGG 133 (242)
T ss_dssp HTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCS-----SCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHC
T ss_pred cCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHH-----HHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccC
Confidence 45789999999998999999998765667877766642 2233555655432211122344566554221100 0
Q ss_pred CCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEE
Q 044601 91 THKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVT 144 (213)
Q Consensus 91 ~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvT 144 (213)
...||.|+.+.++.. ...+|+.+..+|+ |+|.|.+.
T Consensus 134 ~~~fD~V~~d~~~~~-----------------~~~~l~~~~~~Lk-pGG~lv~d 169 (242)
T 3r3h_A 134 EHQFDFIFIDADKTN-----------------YLNYYELALKLVT-PKGLIAID 169 (242)
T ss_dssp SSCEEEEEEESCGGG-----------------HHHHHHHHHHHEE-EEEEEEEE
T ss_pred CCCEeEEEEcCChHH-----------------hHHHHHHHHHhcC-CCeEEEEE
Confidence 367999999876211 1247888999998 99998873
No 168
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=93.88 E-value=0.31 Score=41.29 Aligned_cols=34 Identities=24% Similarity=0.336 Sum_probs=29.2
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccC
Q 044601 14 SKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLD 48 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~d 48 (213)
+..+||=||=|.=.++..|++.++ +..|+++=.+
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~-~~~v~gvDis 79 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWG-PSRMVGLDID 79 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTC-CSEEEEEESC
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcC-CCEEEEECCC
Confidence 468999999999999999999985 5688887776
No 169
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=93.84 E-value=0.6 Score=37.08 Aligned_cols=140 Identities=15% Similarity=0.121 Sum_probs=86.1
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHH-HHHHhCC--CEEEEeeeccccCCCccc
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNV-RELEERG--CLVFYGVDAMQMSQHFFL 89 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni-~~L~~~g--~~V~~gVDAt~L~~~~~l 89 (213)
.++.+||=||=|.=.++..|++.. ++..+++.-... +.+.. +..+. +.++..| -......|+.++..
T Consensus 26 ~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~gvD~s~-~~l~~----~~~~a~~~~~~~~~~~v~~~~~d~~~l~~---- 95 (218)
T 3mq2_A 26 QYDDVVLDVGTGDGKHPYKVARQN-PSRLVVALDADK-SRMEK----ISAKAAAKPAKGGLPNLLYLWATAERLPP---- 95 (218)
T ss_dssp TSSEEEEEESCTTCHHHHHHHHHC-TTEEEEEEESCG-GGGHH----HHHHHTSCGGGTCCTTEEEEECCSTTCCS----
T ss_pred cCCCEEEEecCCCCHHHHHHHHHC-CCCEEEEEECCH-HHHHH----HHHHHHHhhhhcCCCceEEEecchhhCCC----
Confidence 457899999999999999999875 356777765543 21111 11111 1122233 22345668887642
Q ss_pred cCCcccEEEEcCCcCCCcccccchHHHHhhHHHH---HHHHHHHHhhcccCCCeEEEEeccCCCC-------------Cc
Q 044601 90 RTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELV---KGFLRNAKLLLKEENGEIHVTHKEGDPY-------------NK 153 (213)
Q Consensus 90 ~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll---~~Ff~Sa~~~L~~~~G~ihvTl~~~~py-------------~~ 153 (213)
.... |.|+..+|... .++..+ ..+++.+..+|+ |+|.+.++......+ ..
T Consensus 96 ~~~~-d~v~~~~~~~~------------~~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (218)
T 3mq2_A 96 LSGV-GELHVLMPWGS------------LLRGVLGSSPEMLRGMAAVCR-PGASFLVALNLHAWRPSVPEVGEHPEPTPD 161 (218)
T ss_dssp CCCE-EEEEEESCCHH------------HHHHHHTSSSHHHHHHHHTEE-EEEEEEEEEEGGGBTTBCGGGTTCCCCCHH
T ss_pred CCCC-CEEEEEccchh------------hhhhhhccHHHHHHHHHHHcC-CCcEEEEEeccccccccccccccCCccchH
Confidence 2344 88887777322 122223 678899999998 999999976432111 01
Q ss_pred c---cHHhHHHHhCcEEEEEeecCCC
Q 044601 154 W---ELVKKAEKIGLTLQEVVPFCKQ 176 (213)
Q Consensus 154 W---~i~~lA~~~gl~l~~~~~F~~~ 176 (213)
| .+..+.+.+||.+.+...++..
T Consensus 162 ~~~~~l~~~l~~aGf~i~~~~~~~~~ 187 (218)
T 3mq2_A 162 SADEWLAPRYAEAGWKLADCRYLEPE 187 (218)
T ss_dssp HHHHHHHHHHHHTTEEEEEEEEECHH
T ss_pred HHHHHHHHHHHHcCCCceeeeccchh
Confidence 1 1556778899999998777654
No 170
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=93.81 E-value=0.29 Score=42.43 Aligned_cols=106 Identities=19% Similarity=0.171 Sum_probs=67.4
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCC
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTH 92 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~ 92 (213)
.++.+||=||=|.=.++..++++ + ...++|.-.+ + +.+ .+..+++...-.+..-+..-|+..+. +...
T Consensus 37 ~~~~~VLDiGcGtG~ls~~la~~-g-~~~v~~vD~s--~-~~~---~a~~~~~~~~~~~~i~~~~~d~~~~~----~~~~ 104 (328)
T 1g6q_1 37 FKDKIVLDVGCGTGILSMFAAKH-G-AKHVIGVDMS--S-IIE---MAKELVELNGFSDKITLLRGKLEDVH----LPFP 104 (328)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHT-C-CSEEEEEESS--T-HHH---HHHHHHHHTTCTTTEEEEESCTTTSC----CSSS
T ss_pred cCCCEEEEecCccHHHHHHHHHC-C-CCEEEEEChH--H-HHH---HHHHHHHHcCCCCCEEEEECchhhcc----CCCC
Confidence 45789999999987788888876 3 4588887765 2 222 24444443221122234455776653 2347
Q ss_pred cccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEE
Q 044601 93 KFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIH 142 (213)
Q Consensus 93 ~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ih 142 (213)
+||.||.+.|..... +...+..++..+..+|+ |+|.+.
T Consensus 105 ~~D~Ivs~~~~~~l~-----------~~~~~~~~l~~~~~~Lk-pgG~li 142 (328)
T 1g6q_1 105 KVDIIISEWMGYFLL-----------YESMMDTVLYARDHYLV-EGGLIF 142 (328)
T ss_dssp CEEEEEECCCBTTBS-----------TTCCHHHHHHHHHHHEE-EEEEEE
T ss_pred cccEEEEeCchhhcc-----------cHHHHHHHHHHHHhhcC-CCeEEE
Confidence 899999997744321 12234567788889998 999875
No 171
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=93.79 E-value=1.7 Score=36.96 Aligned_cols=134 Identities=16% Similarity=0.170 Sum_probs=80.3
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHh-CCCEEEEeeeccccCCCcccc
Q 044601 12 YSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEE-RGCLVFYGVDAMQMSQHFFLR 90 (213)
Q Consensus 12 y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~-~g~~V~~gVDAt~L~~~~~l~ 90 (213)
+++ .+||=||=|.=.++..|++.+. ...++++ |- ..+.+ .+.+++....- ..++++ .-|+.+ ..
T Consensus 166 ~~~-~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~--D~-~~~~~---~a~~~~~~~~~~~~v~~~-~~d~~~---~~--- 230 (334)
T 2ip2_A 166 FRG-RSFVDVGGGSGELTKAILQAEP-SARGVML--DR-EGSLG---VARDNLSSLLAGERVSLV-GGDMLQ---EV--- 230 (334)
T ss_dssp CTT-CEEEEETCTTCHHHHHHHHHCT-TCEEEEE--EC-TTCTH---HHHHHTHHHHHTTSEEEE-ESCTTT---CC---
T ss_pred CCC-CEEEEeCCCchHHHHHHHHHCC-CCEEEEe--Cc-HHHHH---HHHHHHhhcCCCCcEEEe-cCCCCC---CC---
Confidence 455 8999999999999999999873 4456554 44 32222 24444433321 134443 335544 12
Q ss_pred CCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEecc---C-C-----------------
Q 044601 91 THKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKE---G-D----------------- 149 (213)
Q Consensus 91 ~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~---~-~----------------- 149 (213)
...||.|+.+...--.. ..-...+++.+..+|+ |+|.+.|.-.. . .
T Consensus 231 ~~~~D~v~~~~vl~~~~------------~~~~~~~l~~~~~~L~-pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (334)
T 2ip2_A 231 PSNGDIYLLSRIIGDLD------------EAASLRLLGNCREAMA-GDGRVVVIERTISASEPSPMSVLWDVHLFMACAG 297 (334)
T ss_dssp CSSCSEEEEESCGGGCC------------HHHHHHHHHHHHHHSC-TTCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSC
T ss_pred CCCCCEEEEchhccCCC------------HHHHHHHHHHHHHhcC-CCCEEEEEEeccCCCCCcchhHHhhhHhHhhCCC
Confidence 25699999876532210 1223577888899998 99998887321 1 1
Q ss_pred -CCCcccHHhHHHHhCcEEEEEeec
Q 044601 150 -PYNKWELVKKAEKIGLTLQEVVPF 173 (213)
Q Consensus 150 -py~~W~i~~lA~~~gl~l~~~~~F 173 (213)
.++.=++..+.+++||...+..+-
T Consensus 298 ~~~t~~e~~~ll~~aGf~~~~~~~~ 322 (334)
T 2ip2_A 298 RHRTTEEVVDLLGRGGFAVERIVDL 322 (334)
T ss_dssp CCCBHHHHHHHHHHTTEEEEEEEEE
T ss_pred cCCCHHHHHHHHHHCCCceeEEEEC
Confidence 111223456777889988887653
No 172
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=93.76 E-value=0.28 Score=41.41 Aligned_cols=109 Identities=15% Similarity=0.198 Sum_probs=67.5
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhC-CCCeEEEeccCCHHHHHhhcchHHHHHHHHHhC-CCEEEEeeeccccCCCcccc
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFG-FAHNMVATCLDTQETIANKYSNAVDNVRELEER-GCLVFYGVDAMQMSQHFFLR 90 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~-~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~-g~~V~~gVDAt~L~~~~~l~ 90 (213)
.++.+||=||=|.=.++++|++.+. ++.+||+ .|-.+++++. |.++++..... .+.++ .-|+.++.
T Consensus 69 ~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~g--vD~s~~ml~~---A~~~~~~~~~~~~v~~~-~~D~~~~~------ 136 (261)
T 4gek_A 69 QPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIA--IDNSPAMIER---CRRHIDAYKAPTPVDVI-EGDIRDIA------ 136 (261)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEE--EESCHHHHHH---HHHHHHTSCCSSCEEEE-ESCTTTCC------
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEE--EECCHHHHHH---HHHHHHhhccCceEEEe-eccccccc------
Confidence 4678999999988888899998864 2445655 5633444442 55555443322 23333 44777653
Q ss_pred CCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEec
Q 044601 91 THKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHK 146 (213)
Q Consensus 91 ~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~ 146 (213)
...||.|+-|+=.- . ....-...+++.+..+|+ |+|.+.|+-.
T Consensus 137 ~~~~d~v~~~~~l~-~-----------~~~~~~~~~l~~i~~~Lk-pGG~lii~e~ 179 (261)
T 4gek_A 137 IENASMVVLNFTLQ-F-----------LEPSERQALLDKIYQGLN-PGGALVLSEK 179 (261)
T ss_dssp CCSEEEEEEESCGG-G-----------SCHHHHHHHHHHHHHHEE-EEEEEEEEEE
T ss_pred ccccccceeeeeee-e-----------cCchhHhHHHHHHHHHcC-CCcEEEEEec
Confidence 24599999887311 1 011112356788889998 9999888743
No 173
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=93.69 E-value=0.47 Score=40.80 Aligned_cols=133 Identities=14% Similarity=0.154 Sum_probs=79.0
Q ss_pred CCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCCcc
Q 044601 15 KQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTHKF 94 (213)
Q Consensus 15 ~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~~F 94 (213)
..+||=||=|.=.++..|++.+. ... .|.+|- .++.+ .+..++....-.+-.-...-|+.+.... -...|
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p-~~~--~~~~D~-~~~~~---~a~~~~~~~~~~~~v~~~~~d~~~~~~~---~~~~~ 249 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHP-QLT--GQIWDL-PTTRD---AARKTIHAHDLGGRVEFFEKNLLDARNF---EGGAA 249 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCT-TCE--EEEEEC-GGGHH---HHHHHHHHTTCGGGEEEEECCTTCGGGG---TTCCE
T ss_pred CCEEEEeCCCcCHHHHHHHHhCC-CCe--EEEEEC-HHHHH---HHHHHHHhcCCCCceEEEeCCcccCccc---CCCCc
Confidence 78999999999999999998874 334 455565 33333 2444443321111122344566554311 13559
Q ss_pred cEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEecc------------------------CCC
Q 044601 95 DRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKE------------------------GDP 150 (213)
Q Consensus 95 DrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~------------------------~~p 150 (213)
|.|+.+.-.--. ...-...+++.+..+|+ |+|.+.|.-.. +..
T Consensus 250 D~v~~~~vlh~~------------~~~~~~~~l~~~~~~L~-pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (352)
T 3mcz_A 250 DVVMLNDCLHYF------------DAREAREVIGHAAGLVK-PGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGEL 316 (352)
T ss_dssp EEEEEESCGGGS------------CHHHHHHHHHHHHHTEE-EEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCC
T ss_pred cEEEEecccccC------------CHHHHHHHHHHHHHHcC-CCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCc
Confidence 999986543221 11224577888999998 99998875321 111
Q ss_pred CCcccHHhHHHHhCcEEEEE
Q 044601 151 YNKWELVKKAEKIGLTLQEV 170 (213)
Q Consensus 151 y~~W~i~~lA~~~gl~l~~~ 170 (213)
++.=++..+.+++||.+.+.
T Consensus 317 ~t~~e~~~ll~~aGf~~~~~ 336 (352)
T 3mcz_A 317 HPTPWIAGVVRDAGLAVGER 336 (352)
T ss_dssp CCHHHHHHHHHHTTCEEEEE
T ss_pred CCHHHHHHHHHHCCCceeee
Confidence 22223556788899998873
No 174
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=93.63 E-value=0.22 Score=41.08 Aligned_cols=101 Identities=16% Similarity=0.162 Sum_probs=65.1
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCCc
Q 044601 14 SKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTHK 93 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~~ 93 (213)
+..+||=||=|.=.++..|++. +.++++.-.+ +++.+. +..+.. + .....|+..+. +....
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s--~~~l~~---a~~~~~-----~--~~~~~d~~~~~----~~~~~ 114 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQER---GFEVVLVDPS--KEMLEV---AREKGV-----K--NVVEAKAEDLP----FPSGA 114 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTT---TCEEEEEESC--HHHHHH---HHHHTC-----S--CEEECCTTSCC----SCTTC
T ss_pred CCCeEEEeCCCcCHHHHHHHHc---CCeEEEEeCC--HHHHHH---HHhhcC-----C--CEEECcHHHCC----CCCCC
Confidence 6789999999998899999876 3466665443 222221 222211 2 25566777754 33578
Q ss_pred ccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEecc
Q 044601 94 FDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKE 147 (213)
Q Consensus 94 FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~ 147 (213)
||.|+.+++-... ..+ ...+++.+..+|+ |+|.+.++...
T Consensus 115 fD~v~~~~~~~~~----------~~~---~~~~l~~~~~~Lk-pgG~l~~~~~~ 154 (260)
T 2avn_A 115 FEAVLALGDVLSY----------VEN---KDKAFSEIRRVLV-PDGLLIATVDN 154 (260)
T ss_dssp EEEEEECSSHHHH----------CSC---HHHHHHHHHHHEE-EEEEEEEEEEB
T ss_pred EEEEEEcchhhhc----------ccc---HHHHHHHHHHHcC-CCeEEEEEeCC
Confidence 9999986542111 011 4578889999998 99999887643
No 175
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=93.63 E-value=0.07 Score=48.28 Aligned_cols=121 Identities=15% Similarity=0.220 Sum_probs=70.1
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHH-----h---CCCEEEEeeeccccCC
Q 044601 14 SKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELE-----E---RGCLVFYGVDAMQMSQ 85 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~-----~---~g~~V~~gVDAt~L~~ 85 (213)
+.++||.+|=|+=.+++.++++. +..|++--.| +++.+ -+.+|+..+. . -.++|+.+ ||-+.-+
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~--~~~Vt~VEID--~~vie---~Ar~~~~~l~~~~l~dp~~~rv~vi~~-Da~~~L~ 259 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLK--PKMVTMVEID--QMVID---GCKKYMRKTCGDVLDNLKGDCYQVLIE-DCIPVLK 259 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTC--CSEEEEEESC--HHHHH---HHHHHCCC----CCSSSEETTEEEEES-CHHHHHH
T ss_pred CCCEEEEEECChhHHHHHHHHCC--CCEEEEEECC--HHHHH---HHHHHHHHhccccccccCCCcEEEEEC-cHHHHHH
Confidence 56899999999999999998763 4677776666 33333 1344443332 1 13555554 7776432
Q ss_pred CccccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEecc
Q 044601 86 HFFLRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKE 147 (213)
Q Consensus 86 ~~~l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~ 147 (213)
...-...+||.||-+-|..+...... . ..-++.+...+..|..+|+ |+|.+.+-.+.
T Consensus 260 ~~~~~~~~fDvII~D~~d~P~~~~p~---~-L~t~eFy~~~~~~~~~~L~-pgGilv~qs~s 316 (364)
T 2qfm_A 260 RYAKEGREFDYVINDLTAVPISTSPE---E-DSTWEFLRLILDLSMKVLK-QDGKYFTQGNC 316 (364)
T ss_dssp HHHHHTCCEEEEEEECCSSCCCCC--------CHHHHHHHHHHHHHHTEE-EEEEEEEEEEE
T ss_pred hhhccCCCceEEEECCCCcccCcCch---h-hhHHHHHHHHHHHHHhhCC-CCcEEEEEcCC
Confidence 21002468999999998622110000 0 1223334444444489998 89988776543
No 176
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=93.58 E-value=0.16 Score=41.89 Aligned_cols=107 Identities=15% Similarity=0.086 Sum_probs=68.0
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCC---EEEEeeeccccCCCcc
Q 044601 12 YSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGC---LVFYGVDAMQMSQHFF 88 (213)
Q Consensus 12 y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~---~V~~gVDAt~L~~~~~ 88 (213)
..+.++||=||=|.=..+..|+++++....|++.-.+ ++..+ -+..|++. .|. .-+..-||...-....
T Consensus 68 ~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~--~~~~~---~a~~~~~~---~g~~~~i~~~~gda~~~l~~l~ 139 (237)
T 3c3y_A 68 LVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFD--REAYE---IGLPFIRK---AGVEHKINFIESDAMLALDNLL 139 (237)
T ss_dssp HTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESC--HHHHH---HHHHHHHH---TTCGGGEEEEESCHHHHHHHHH
T ss_pred hhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECC--HHHHH---HHHHHHHH---cCCCCcEEEEEcCHHHHHHHHH
Confidence 3467899999999888899999987645677766554 22222 24455543 343 2234446665322110
Q ss_pred c---cCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEE
Q 044601 89 L---RTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVT 144 (213)
Q Consensus 89 l---~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvT 144 (213)
- ....||.|+.+.++. ....||+.+..+|+ ++|.|.+.
T Consensus 140 ~~~~~~~~fD~I~~d~~~~-----------------~~~~~l~~~~~~L~-pGG~lv~d 180 (237)
T 3c3y_A 140 QGQESEGSYDFGFVDADKP-----------------NYIKYHERLMKLVK-VGGIVAYD 180 (237)
T ss_dssp HSTTCTTCEEEEEECSCGG-----------------GHHHHHHHHHHHEE-EEEEEEEE
T ss_pred hccCCCCCcCEEEECCchH-----------------HHHHHHHHHHHhcC-CCeEEEEe
Confidence 0 136799999874321 12468888999998 99998774
No 177
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=93.55 E-value=0.92 Score=38.60 Aligned_cols=117 Identities=13% Similarity=0.083 Sum_probs=73.4
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCCc
Q 044601 14 SKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTHK 93 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~~ 93 (213)
+..+||=+|=|.=.++.+|++. +..+++|+-.+ .+.+. -+..|++.+.-.+-.-++.-|+...- . .+
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~--~~~~v~~vDis-~~al~----~A~~n~~~~~l~~~v~~~~~D~~~~~-----~-~~ 189 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKF--SDAIVFATDVS-SKAVE----IARKNAERHGVSDRFFVRKGEFLEPF-----K-EK 189 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHH--SSCEEEEEESC-HHHHH----HHHHHHHHTTCTTSEEEEESSTTGGG-----G-GG
T ss_pred CCCEEEEEeCchhHHHHHHHHC--CCCEEEEEECC-HHHHH----HHHHHHHHcCCCCceEEEECcchhhc-----c-cc
Confidence 4579999999999999999988 46688877654 33332 25666655432221234445665521 1 46
Q ss_pred c---cEEEEcCCcCCCcccccchHHHHh--hHHHH-----HHHHHHHH-hhcccCCCeEEEEec
Q 044601 94 F---DRVIYNFPHVGFIFRENSYCQIQL--NKELV-----KGFLRNAK-LLLKEENGEIHVTHK 146 (213)
Q Consensus 94 F---DrIiFNFPH~G~~~~e~~~~~i~~--n~~Ll-----~~Ff~Sa~-~~L~~~~G~ihvTl~ 146 (213)
| |.||.|-|.++... .....+.. ...|. ..|++.+. ..|+ ++|.+.+.+-
T Consensus 190 f~~~D~IvsnPPyi~~~~--~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~-pgG~l~~e~~ 250 (284)
T 1nv8_A 190 FASIEMILSNPPYVKSSA--HLPKDVLFEPPEALFGGEDGLDFYREFFGRYDT-SGKIVLMEIG 250 (284)
T ss_dssp TTTCCEEEECCCCBCGGG--SCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCC-TTCEEEEECC
T ss_pred cCCCCEEEEcCCCCCccc--ccChhhccCcHHHhcCCCcHHHHHHHHHHhcCC-CCCEEEEEEC
Confidence 8 99999999887531 10011111 11121 16888888 9998 9999998764
No 178
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=93.52 E-value=0.25 Score=43.77 Aligned_cols=109 Identities=18% Similarity=0.198 Sum_probs=69.1
Q ss_pred CCCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCcccc
Q 044601 11 HYSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLR 90 (213)
Q Consensus 11 ~y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~ 90 (213)
+..++.+||=||=|.=.++..|+++ + ...|+|.-.. +.+ + .+..+++...-.+...+..-|+.++. +.
T Consensus 60 ~~~~~~~VLDlGcGtG~ls~~la~~-g-~~~V~gvD~s--~~~-~---~a~~~~~~~~~~~~v~~~~~d~~~~~----~~ 127 (376)
T 3r0q_C 60 HHFEGKTVLDVGTGSGILAIWSAQA-G-ARKVYAVEAT--KMA-D---HARALVKANNLDHIVEVIEGSVEDIS----LP 127 (376)
T ss_dssp TTTTTCEEEEESCTTTHHHHHHHHT-T-CSEEEEEESS--TTH-H---HHHHHHHHTTCTTTEEEEESCGGGCC----CS
T ss_pred ccCCCCEEEEeccCcCHHHHHHHhc-C-CCEEEEEccH--HHH-H---HHHHHHHHcCCCCeEEEEECchhhcC----cC
Confidence 4456899999999988888888876 3 4588887665 222 2 13344433221122345556777664 12
Q ss_pred CCcccEEEEcC-CcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEe
Q 044601 91 THKFDRVIYNF-PHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTH 145 (213)
Q Consensus 91 ~~~FDrIiFNF-PH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl 145 (213)
.+||.||.+. +|... +...+..++..+..+|+ |+|.+.+..
T Consensus 128 -~~~D~Iv~~~~~~~l~------------~e~~~~~~l~~~~~~Lk-pgG~li~~~ 169 (376)
T 3r0q_C 128 -EKVDVIISEWMGYFLL------------RESMFDSVISARDRWLK-PTGVMYPSH 169 (376)
T ss_dssp -SCEEEEEECCCBTTBT------------TTCTHHHHHHHHHHHEE-EEEEEESSE
T ss_pred -CcceEEEEcChhhccc------------chHHHHHHHHHHHhhCC-CCeEEEEec
Confidence 7899999987 34332 11235567788889998 999875543
No 179
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=93.48 E-value=0.47 Score=38.42 Aligned_cols=106 Identities=16% Similarity=0.084 Sum_probs=66.8
Q ss_pred CCCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCC-CEEEEeeeccccCCCccc
Q 044601 11 HYSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERG-CLVFYGVDAMQMSQHFFL 89 (213)
Q Consensus 11 ~y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g-~~V~~gVDAt~L~~~~~l 89 (213)
...+..+||=||=|.=.++..|++. +..+++.-.+ +++.+ .+..++ +... -......|+..+. +
T Consensus 36 ~~~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s--~~~~~---~a~~~~---~~~~~~~~~~~~d~~~~~----~ 100 (263)
T 2yqz_A 36 PKGEEPVFLELGVGTGRIALPLIAR---GYRYIALDAD--AAMLE---VFRQKI---AGVDRKVQVVQADARAIP----L 100 (263)
T ss_dssp CSSSCCEEEEETCTTSTTHHHHHTT---TCEEEEEESC--HHHHH---HHHHHT---TTSCTTEEEEESCTTSCC----S
T ss_pred CCCCCCEEEEeCCcCCHHHHHHHHC---CCEEEEEECC--HHHHH---HHHHHh---hccCCceEEEEcccccCC----C
Confidence 4567899999999888888888876 3467666544 22222 133333 1111 1233455776653 3
Q ss_pred cCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEec
Q 044601 90 RTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHK 146 (213)
Q Consensus 90 ~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~ 146 (213)
....||.|+.++.---.. + ...+++.+..+|+ |+|.+.++..
T Consensus 101 ~~~~fD~v~~~~~l~~~~-----------~---~~~~l~~~~~~L~-pgG~l~~~~~ 142 (263)
T 2yqz_A 101 PDESVHGVIVVHLWHLVP-----------D---WPKVLAEAIRVLK-PGGALLEGWD 142 (263)
T ss_dssp CTTCEEEEEEESCGGGCT-----------T---HHHHHHHHHHHEE-EEEEEEEEEE
T ss_pred CCCCeeEEEECCchhhcC-----------C---HHHHHHHHHHHCC-CCcEEEEEec
Confidence 457899999986532210 0 2367888899998 9999988843
No 180
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=93.41 E-value=0.24 Score=41.27 Aligned_cols=108 Identities=10% Similarity=0.037 Sum_probs=67.3
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHh-CCCEEEEeeeccccCCCccc--
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEE-RGCLVFYGVDAMQMSQHFFL-- 89 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~-~g~~V~~gVDAt~L~~~~~l-- 89 (213)
.+.++||=||=|.=..+..|++.+..+..|++.-.+.. ..+ -+..|++...- ..++ +..-||...-....-
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~--~~~---~a~~~~~~~g~~~~i~-~~~gda~~~l~~l~~~~ 151 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKE--NYE---LGLPVIKKAGVDHKID-FREGPALPVLDEMIKDE 151 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCH--HHH---HHHHHHHHTTCGGGEE-EEESCHHHHHHHHHHSG
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHH--HHH---HHHHHHHHcCCCCCeE-EEECCHHHHHHHHHhcc
Confidence 45789999999988889999998754567777665542 222 24445543211 1133 334466653211100
Q ss_pred -cCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEE
Q 044601 90 -RTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVT 144 (213)
Q Consensus 90 -~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvT 144 (213)
....||.|+.+.+... ...+|..+..+|+ ++|.|.+.
T Consensus 152 ~~~~~fD~V~~d~~~~~-----------------~~~~l~~~~~~Lk-pGG~lv~d 189 (247)
T 1sui_A 152 KNHGSYDFIFVDADKDN-----------------YLNYHKRLIDLVK-VGGVIGYD 189 (247)
T ss_dssp GGTTCBSEEEECSCSTT-----------------HHHHHHHHHHHBC-TTCCEEEE
T ss_pred CCCCCEEEEEEcCchHH-----------------HHHHHHHHHHhCC-CCeEEEEe
Confidence 1367999998865211 2367888899998 99998774
No 181
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=93.39 E-value=0.68 Score=37.63 Aligned_cols=104 Identities=16% Similarity=0.113 Sum_probs=66.3
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCC-CccccC
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQ-HFFLRT 91 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~-~~~l~~ 91 (213)
.+..+||=||=|.=.++..|++.. ....|++.-.+ ++..+ .+..+++...-..-.-+..-|+...-. .. .
T Consensus 70 ~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~~--~~~~~---~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~---~ 140 (232)
T 3ntv_A 70 NNVKNILEIGTAIGYSSMQFASIS-DDIHVTTIERN--ETMIQ---YAKQNLATYHFENQVRIIEGNALEQFENVN---D 140 (232)
T ss_dssp HTCCEEEEECCSSSHHHHHHHTTC-TTCEEEEEECC--HHHHH---HHHHHHHHTTCTTTEEEEESCGGGCHHHHT---T
T ss_pred cCCCEEEEEeCchhHHHHHHHHhC-CCCEEEEEECC--HHHHH---HHHHHHHHcCCCCcEEEEECCHHHHHHhhc---c
Confidence 467899999999888899999854 35677666554 22222 245555443211122344557765422 11 4
Q ss_pred CcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEE
Q 044601 92 HKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHV 143 (213)
Q Consensus 92 ~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihv 143 (213)
..||.|+.+.+... +..||+.+..+|+ |+|.|.+
T Consensus 141 ~~fD~V~~~~~~~~-----------------~~~~l~~~~~~Lk-pgG~lv~ 174 (232)
T 3ntv_A 141 KVYDMIFIDAAKAQ-----------------SKKFFEIYTPLLK-HQGLVIT 174 (232)
T ss_dssp SCEEEEEEETTSSS-----------------HHHHHHHHGGGEE-EEEEEEE
T ss_pred CCccEEEEcCcHHH-----------------HHHHHHHHHHhcC-CCeEEEE
Confidence 68999998854221 2358999999998 9999866
No 182
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=93.35 E-value=0.19 Score=41.07 Aligned_cols=108 Identities=12% Similarity=0.059 Sum_probs=65.7
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhC-CCEEEEeeeccccCCCccccC
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEER-GCLVFYGVDAMQMSQHFFLRT 91 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~-g~~V~~gVDAt~L~~~~~l~~ 91 (213)
.+..+||=||=|.=.++..|++.++....|++.-.+ ++..+ -+..+++...-. .+.+ ..-|+...-.......
T Consensus 71 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~--~~~~~---~a~~~~~~~g~~~~i~~-~~~d~~~~l~~l~~~~ 144 (232)
T 3cbg_A 71 TGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQD--PNATA---IAKKYWQKAGVAEKISL-RLGPALATLEQLTQGK 144 (232)
T ss_dssp HTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESC--HHHHH---HHHHHHHHHTCGGGEEE-EESCHHHHHHHHHTSS
T ss_pred cCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECC--HHHHH---HHHHHHHHcCCCCcEEE-EEcCHHHHHHHHHhcC
Confidence 357899999999888889999887545567665544 22222 244455433211 1333 3445544211111112
Q ss_pred --CcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEE
Q 044601 92 --HKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVT 144 (213)
Q Consensus 92 --~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvT 144 (213)
..||.|+.+.+.. -...+|..+..+|+ ++|.|.+.
T Consensus 145 ~~~~fD~V~~d~~~~-----------------~~~~~l~~~~~~Lk-pgG~lv~~ 181 (232)
T 3cbg_A 145 PLPEFDLIFIDADKR-----------------NYPRYYEIGLNLLR-RGGLMVID 181 (232)
T ss_dssp SCCCEEEEEECSCGG-----------------GHHHHHHHHHHTEE-EEEEEEEE
T ss_pred CCCCcCEEEECCCHH-----------------HHHHHHHHHHHHcC-CCeEEEEe
Confidence 6799999886511 01358888999998 99998874
No 183
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=93.32 E-value=0.77 Score=37.11 Aligned_cols=102 Identities=16% Similarity=0.048 Sum_probs=68.3
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCC
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTH 92 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~ 92 (213)
.+..+||=||=|.=.++..|++.+. +..+++.-.+. ++.+. +..+ ..++.+ ...|+..+. ...
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~~D~s~--~~~~~---a~~~-----~~~~~~-~~~d~~~~~-----~~~ 94 (259)
T 2p35_A 32 ERVLNGYDLGCGPGNSTELLTDRYG-VNVITGIDSDD--DMLEK---AADR-----LPNTNF-GKADLATWK-----PAQ 94 (259)
T ss_dssp SCCSSEEEETCTTTHHHHHHHHHHC-TTSEEEEESCH--HHHHH---HHHH-----STTSEE-EECCTTTCC-----CSS
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCC-CCEEEEEECCH--HHHHH---HHHh-----CCCcEE-EECChhhcC-----ccC
Confidence 4578999999999999999998873 56787775542 22221 2222 124444 455777664 256
Q ss_pred cccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEec
Q 044601 93 KFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHK 146 (213)
Q Consensus 93 ~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~ 146 (213)
.||.|+.++..--.. + ...+++.+..+|+ |+|.+.++..
T Consensus 95 ~fD~v~~~~~l~~~~-----------~---~~~~l~~~~~~L~-pgG~l~~~~~ 133 (259)
T 2p35_A 95 KADLLYANAVFQWVP-----------D---HLAVLSQLMDQLE-SGGVLAVQMP 133 (259)
T ss_dssp CEEEEEEESCGGGST-----------T---HHHHHHHHGGGEE-EEEEEEEEEE
T ss_pred CcCEEEEeCchhhCC-----------C---HHHHHHHHHHhcC-CCeEEEEEeC
Confidence 799999987532210 0 2367888999998 9999988864
No 184
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=93.30 E-value=0.38 Score=38.37 Aligned_cols=100 Identities=18% Similarity=0.183 Sum_probs=64.7
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCC
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTH 92 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~ 92 (213)
.+..+||=||=|.=.++..|++... .+++.-.+ +++.+. +..++ .++.+ ...|+.++. + ..
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~s--~~~~~~---a~~~~-----~~~~~-~~~d~~~~~----~-~~ 99 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFG---DTAGLELS--EDMLTH---ARKRL-----PDATL-HQGDMRDFR----L-GR 99 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHS---EEEEEESC--HHHHHH---HHHHC-----TTCEE-EECCTTTCC----C-SS
T ss_pred CCCCeEEEecccCCHHHHHHHHhCC---cEEEEeCC--HHHHHH---HHHhC-----CCCEE-EECCHHHcc----c-CC
Confidence 5678999999999899999998852 66664433 222221 22221 23544 445777653 2 46
Q ss_pred cccEEEE---cCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEe
Q 044601 93 KFDRVIY---NFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTH 145 (213)
Q Consensus 93 ~FDrIiF---NFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl 145 (213)
.||.|+- .+.|+.. ..-+..+++.+..+|+ |+|.+.++.
T Consensus 100 ~~D~v~~~~~~~~~~~~-------------~~~~~~~l~~~~~~L~-pgG~l~~~~ 141 (239)
T 3bxo_A 100 KFSAVVSMFSSVGYLKT-------------TEELGAAVASFAEHLE-PGGVVVVEP 141 (239)
T ss_dssp CEEEEEECTTGGGGCCS-------------HHHHHHHHHHHHHTEE-EEEEEEECC
T ss_pred CCcEEEEcCchHhhcCC-------------HHHHHHHHHHHHHhcC-CCeEEEEEe
Confidence 7999994 2334331 1234578899999998 999998874
No 185
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=93.19 E-value=1.6 Score=34.43 Aligned_cols=110 Identities=14% Similarity=0.029 Sum_probs=66.9
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHH-----hCCCEEEEeeeccccCCCc
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELE-----ERGCLVFYGVDAMQMSQHF 87 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~-----~~g~~V~~gVDAt~L~~~~ 87 (213)
.+..+||=||=|.=.++..|++..+ ...+++.-.+ . ++.+ .+..++.... ...+.++ .-|+..+.
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s-~-~~~~---~a~~~~~~~~~~~~~~~~v~~~-~~d~~~~~--- 97 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDSF-FEQITGVDVS-Y-RSLE---IAQERLDRLRLPRNQWERLQLI-QGALTYQD--- 97 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCTT-CSEEEEEESC-H-HHHH---HHHHHHTTCCCCHHHHTTEEEE-ECCTTSCC---
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhCC-CCEEEEEECC-H-HHHH---HHHHHHHHhcCCcccCcceEEE-eCCccccc---
Confidence 3568999999999999999998653 4577776554 2 2222 1333322110 1123333 34664432
Q ss_pred cccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEec
Q 044601 88 FLRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHK 146 (213)
Q Consensus 88 ~l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~ 146 (213)
.....||.|+.+..--- ....-+..+++.+..+|+ ++|.+.++..
T Consensus 98 -~~~~~fD~v~~~~~l~~------------~~~~~~~~~l~~~~~~Lk-pgG~li~~~~ 142 (217)
T 3jwh_A 98 -KRFHGYDAATVIEVIEH------------LDLSRLGAFERVLFEFAQ-PKIVIVTTPN 142 (217)
T ss_dssp -GGGCSCSEEEEESCGGG------------CCHHHHHHHHHHHHTTTC-CSEEEEEEEB
T ss_pred -ccCCCcCEEeeHHHHHc------------CCHHHHHHHHHHHHHHcC-CCEEEEEccC
Confidence 22468999998754221 122345678899999998 9997776654
No 186
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=93.19 E-value=0.39 Score=38.97 Aligned_cols=104 Identities=13% Similarity=0.022 Sum_probs=64.5
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccC
Q 044601 12 YSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRT 91 (213)
Q Consensus 12 y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~ 91 (213)
..++.+||-||=|.=.++..|++..+ ..+++.-.+ +++.+ .+..|+..+.-.++. +..-|+. . ... ..
T Consensus 89 ~~~~~~vLdiG~G~G~~~~~la~~~~--~~v~~vD~~--~~~~~---~a~~~~~~~~~~~v~-~~~~d~~-~--~~~-~~ 156 (235)
T 1jg1_A 89 LKPGMNILEVGTGSGWNAALISEIVK--TDVYTIERI--PELVE---FAKRNLERAGVKNVH-VILGDGS-K--GFP-PK 156 (235)
T ss_dssp CCTTCCEEEECCTTSHHHHHHHHHHC--SCEEEEESC--HHHHH---HHHHHHHHTTCCSEE-EEESCGG-G--CCG-GG
T ss_pred CCCCCEEEEEeCCcCHHHHHHHHHhC--CEEEEEeCC--HHHHH---HHHHHHHHcCCCCcE-EEECCcc-c--CCC-CC
Confidence 35678999999998889999998875 567666544 23333 245555443222233 3334551 1 111 13
Q ss_pred CcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccC
Q 044601 92 HKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEG 148 (213)
Q Consensus 92 ~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~ 148 (213)
..||.||.+.+..... ..+..+|+ ++|.+.|+....
T Consensus 157 ~~fD~Ii~~~~~~~~~--------------------~~~~~~L~-pgG~lvi~~~~~ 192 (235)
T 1jg1_A 157 APYDVIIVTAGAPKIP--------------------EPLIEQLK-IGGKLIIPVGSY 192 (235)
T ss_dssp CCEEEEEECSBBSSCC--------------------HHHHHTEE-EEEEEEEEECSS
T ss_pred CCccEEEECCcHHHHH--------------------HHHHHhcC-CCcEEEEEEecC
Confidence 4599999887643321 14577898 999999998654
No 187
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=92.98 E-value=1.3 Score=36.96 Aligned_cols=136 Identities=15% Similarity=0.116 Sum_probs=75.5
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHH---------HHH--------hCCCEEE
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVR---------ELE--------ERGCLVF 75 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~---------~L~--------~~g~~V~ 75 (213)
.+..+||-||=|+=-.+..||+. +..|||.=+ |+..+.. +..... ... ..+++ +
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~---G~~V~gvD~-S~~~i~~----a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~ 137 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADR---GHTVVGVEI-SEIGIRE----FFAEQNLSYTEEPLAEIAGAKVFKSSSGSIS-L 137 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHT---TCEEEEECS-CHHHHHH----HHHHTTCCEEEEECTTSTTCEEEEETTSSEE-E
T ss_pred CCCCeEEEeCCCCcHHHHHHHHC---CCeEEEEEC-CHHHHHH----HHHhcccccccccccccccccccccCCCceE-E
Confidence 36789999999888888888875 345555433 3333322 211110 000 01233 3
Q ss_pred EeeeccccCCCccccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEE-EEecc------C
Q 044601 76 YGVDAMQMSQHFFLRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIH-VTHKE------G 148 (213)
Q Consensus 76 ~gVDAt~L~~~~~l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ih-vTl~~------~ 148 (213)
..-|+.++... ....||.|+-+.-..-. +......+++.+..+|+ |+|.+. +|+.- +
T Consensus 138 ~~~D~~~l~~~---~~~~FD~V~~~~~l~~l------------~~~~~~~~l~~~~~~Lk-pGG~l~l~~~~~~~~~~~g 201 (252)
T 2gb4_A 138 YCCSIFDLPRA---NIGKFDRIWDRGALVAI------------NPGDHDRYADIILSLLR-KEFQYLVAVLSYDPTKHAG 201 (252)
T ss_dssp EESCTTTGGGG---CCCCEEEEEESSSTTTS------------CGGGHHHHHHHHHHTEE-EEEEEEEEEEECCTTSCCC
T ss_pred EECccccCCcc---cCCCEEEEEEhhhhhhC------------CHHHHHHHHHHHHHHcC-CCeEEEEEEEecCCccCCC
Confidence 44587776421 12689999976433221 11223578899999998 999985 66642 3
Q ss_pred CCCCcccHHhHHHH--hCcEEEEEeecC
Q 044601 149 DPYNKWELVKKAEK--IGLTLQEVVPFC 174 (213)
Q Consensus 149 ~py~~W~i~~lA~~--~gl~l~~~~~F~ 174 (213)
+|+. +...++.+. .+|.+......+
T Consensus 202 ~~~~-~~~~el~~~l~~~f~v~~~~~~~ 228 (252)
T 2gb4_A 202 PPFY-VPSAELKRLFGTKCSMQCLEEVD 228 (252)
T ss_dssp SSCC-CCHHHHHHHHTTTEEEEEEEEEE
T ss_pred CCCC-CCHHHHHHHhhCCeEEEEEeccc
Confidence 3332 444443332 247776665443
No 188
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=92.96 E-value=0.98 Score=35.36 Aligned_cols=118 Identities=18% Similarity=0.126 Sum_probs=68.1
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCC
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTH 92 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~ 92 (213)
.++.+||=+|=|.=.|+..|++. + ...+++.-.+. ++.+ .+..|+. ++.++ .-|+.++. .
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~-~-~~~v~~vD~~~--~~~~---~a~~~~~-----~~~~~-~~d~~~~~-------~ 109 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLL-G-AESVTAFDIDP--DAIE---TAKRNCG-----GVNFM-VADVSEIS-------G 109 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHT-T-BSEEEEEESCH--HHHH---HHHHHCT-----TSEEE-ECCGGGCC-------C
T ss_pred CCCCEEEEEeCCccHHHHHHHHc-C-CCEEEEEECCH--HHHH---HHHHhcC-----CCEEE-ECcHHHCC-------C
Confidence 35689999999988899998876 3 34677766552 2222 1334433 55544 44777652 5
Q ss_pred cccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCCCCcccHHhHHHHhCcEEEEE
Q 044601 93 KFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDPYNKWELVKKAEKIGLTLQEV 170 (213)
Q Consensus 93 ~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py~~W~i~~lA~~~gl~l~~~ 170 (213)
.||.||.|-|..-... ... ..|++.+..++ |.|.+.... .....+..++...| .+...
T Consensus 110 ~~D~v~~~~p~~~~~~--------~~~----~~~l~~~~~~~----g~~~~~~~~---~~~~~~~~~~~~~g-~~~~~ 167 (200)
T 1ne2_A 110 KYDTWIMNPPFGSVVK--------HSD----RAFIDKAFETS----MWIYSIGNA---KARDFLRREFSARG-DVFRE 167 (200)
T ss_dssp CEEEEEECCCC---------------C----HHHHHHHHHHE----EEEEEEEEG---GGHHHHHHHHHHHE-EEEEE
T ss_pred CeeEEEECCCchhccC--------chh----HHHHHHHHHhc----CcEEEEEcC---chHHHHHHHHHHCC-CEEEE
Confidence 7999999988433210 011 24566666666 456665532 22223555667777 55444
No 189
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=92.87 E-value=0.49 Score=37.81 Aligned_cols=115 Identities=15% Similarity=0.147 Sum_probs=77.5
Q ss_pred CCCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCcc--
Q 044601 11 HYSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFF-- 88 (213)
Q Consensus 11 ~y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~-- 88 (213)
...++.+||=+|=|.=++|..|++. ...|+|.-+.... + ..++.++ ..|+++......
T Consensus 22 ~~~~g~~VLDlG~G~G~~s~~la~~---~~~V~gvD~~~~~------~----------~~~v~~~-~~D~~~~~~~~~~~ 81 (191)
T 3dou_A 22 VVRKGDAVIEIGSSPGGWTQVLNSL---ARKIISIDLQEME------E----------IAGVRFI-RCDIFKETIFDDID 81 (191)
T ss_dssp CSCTTCEEEEESCTTCHHHHHHTTT---CSEEEEEESSCCC------C----------CTTCEEE-ECCTTSSSHHHHHH
T ss_pred CCCCCCEEEEEeecCCHHHHHHHHc---CCcEEEEeccccc------c----------CCCeEEE-EccccCHHHHHHHH
Confidence 3567899999999999999999877 4688888776431 1 1256554 557777542111
Q ss_pred --cc---CCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCC
Q 044601 89 --LR---THKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGD 149 (213)
Q Consensus 89 --l~---~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~ 149 (213)
+. ..+||.|+-|.|-..... . .........|+...+..|..+|+ |+|.+.+.+.+++
T Consensus 82 ~~~~~~~~~~~D~Vlsd~~~~~~g~-~--~~d~~~~~~l~~~~l~~a~~~Lk-pGG~lv~k~~~~~ 143 (191)
T 3dou_A 82 RALREEGIEKVDDVVSDAMAKVSGI-P--SRDHAVSYQIGQRVMEIAVRYLR-NGGNVLLKQFQGD 143 (191)
T ss_dssp HHHHHHTCSSEEEEEECCCCCCCSC-H--HHHHHHHHHHHHHHHHHHHHHEE-EEEEEEEEEECST
T ss_pred HHhhcccCCcceEEecCCCcCCCCC-c--ccCHHHHHHHHHHHHHHHHHHcc-CCCEEEEEEcCCC
Confidence 11 138999999976433211 1 11122344677888999999998 9999999888775
No 190
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=92.79 E-value=1.8 Score=36.51 Aligned_cols=116 Identities=16% Similarity=0.026 Sum_probs=69.7
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHh-----CCC-EEEEeeeccccCCC
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEE-----RGC-LVFYGVDAMQMSQH 86 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~-----~g~-~V~~gVDAt~L~~~ 86 (213)
.+..+||=||=|.=.++..|++. ....++++-.+ .+ +.+ .+..+...... ... .-....|+..+.-.
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~--~~~~v~gvD~s-~~-~l~---~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 105 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKG--RINKLVCTDIA-DV-SVK---QCQQRYEDMKNRRDSEYIFSAEFITADSSKELLI 105 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHT--TCSEEEEEESC-HH-HHH---HHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCST
T ss_pred CCCCEEEEECCCCcHHHHHHHhc--CCCEEEEEeCC-HH-HHH---HHHHHHHHhhhcccccccceEEEEEecccccchh
Confidence 35789999998887788888874 25577776554 22 222 13444443321 111 22455677776421
Q ss_pred ccc--cCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEec
Q 044601 87 FFL--RTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHK 146 (213)
Q Consensus 87 ~~l--~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~ 146 (213)
..+ ....||.|+.++..--. -.+..-+..+|+.+..+|+ |+|.+.++..
T Consensus 106 ~~~~~~~~~fD~V~~~~~l~~~----------~~~~~~~~~~l~~~~~~Lk-pgG~li~~~~ 156 (313)
T 3bgv_A 106 DKFRDPQMCFDICSCQFVCHYS----------FESYEQADMMLRNACERLS-PGGYFIGTTP 156 (313)
T ss_dssp TTCSSTTCCEEEEEEETCGGGG----------GGSHHHHHHHHHHHHTTEE-EEEEEEEEEE
T ss_pred hhcccCCCCEEEEEEecchhhc----------cCCHHHHHHHHHHHHHHhC-CCcEEEEecC
Confidence 122 23589999998732110 0223345688999999998 9999888865
No 191
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=92.77 E-value=1.4 Score=35.44 Aligned_cols=119 Identities=13% Similarity=0.089 Sum_probs=74.9
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCcccc-C
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLR-T 91 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~-~ 91 (213)
.++.+||=||=|.=.++..|++. +..++++-.+ . .+.+. +..+ ..++.+ ...|+.. ..++. .
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s-~-~~~~~---a~~~-----~~~~~~-~~~d~~~---~~~~~~~ 109 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQ---AARWAAYDFS-P-ELLKL---ARAN-----APHADV-YEWNGKG---ELPAGLG 109 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGG---SSEEEEEESC-H-HHHHH---HHHH-----CTTSEE-EECCSCS---SCCTTCC
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc---CCEEEEEECC-H-HHHHH---HHHh-----CCCceE-EEcchhh---ccCCcCC
Confidence 46789999999999999999887 3577776554 2 22221 2222 123443 3455532 12233 5
Q ss_pred CcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCCCCcccHHhHHHHhCcEEEEEe
Q 044601 92 HKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDPYNKWELVKKAEKIGLTLQEVV 171 (213)
Q Consensus 92 ~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py~~W~i~~lA~~~gl~l~~~~ 171 (213)
..||.|+.+.. . ..+++.+..+|+ |+|.+... +...+.=.+..+.+++|+......
T Consensus 110 ~~fD~v~~~~~-~-------------------~~~l~~~~~~Lk-pgG~l~~~---~~~~~~~~~~~~l~~~Gf~~~~~~ 165 (226)
T 3m33_A 110 APFGLIVSRRG-P-------------------TSVILRLPELAA-PDAHFLYV---GPRLNVPEVPERLAAVGWDIVAED 165 (226)
T ss_dssp CCEEEEEEESC-C-------------------SGGGGGHHHHEE-EEEEEEEE---ESSSCCTHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEEeCCC-H-------------------HHHHHHHHHHcC-CCcEEEEe---CCcCCHHHHHHHHHHCCCeEEEEE
Confidence 78999999821 1 145667889998 99998711 222344467788889999876654
Q ss_pred e
Q 044601 172 P 172 (213)
Q Consensus 172 ~ 172 (213)
.
T Consensus 166 ~ 166 (226)
T 3m33_A 166 H 166 (226)
T ss_dssp E
T ss_pred e
Confidence 3
No 192
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=92.71 E-value=3 Score=32.85 Aligned_cols=110 Identities=10% Similarity=0.100 Sum_probs=66.5
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHH-----HhCCCEEEEeeeccccCCCc
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVREL-----EERGCLVFYGVDAMQMSQHF 87 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L-----~~~g~~V~~gVDAt~L~~~~ 87 (213)
.+..+||=||=|.=.++..|++..+ ..++++.-.+ . ++.+ .+.+++... ...++.+ ..-|+..+.
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s-~-~~~~---~a~~~~~~~~~~~~~~~~v~~-~~~d~~~~~--- 97 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKS-FEQITGVDVS-Y-SVLE---RAKDRLKIDRLPEMQRKRISL-FQSSLVYRD--- 97 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTT-CCEEEEEESC-H-HHHH---HHHHHHTGGGSCHHHHTTEEE-EECCSSSCC---
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCC-CCEEEEEECC-H-HHHH---HHHHHHHhhccccccCcceEE-EeCcccccc---
Confidence 3578999999999999999998652 4577766554 2 2222 133332211 1113443 344664432
Q ss_pred cccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEec
Q 044601 88 FLRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHK 146 (213)
Q Consensus 88 ~l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~ 146 (213)
.....||.|+.+..--- ....-+..+++.+..+|+ |+|.+.++..
T Consensus 98 -~~~~~fD~V~~~~~l~~------------~~~~~~~~~l~~~~~~Lk-pgG~~i~~~~ 142 (219)
T 3jwg_A 98 -KRFSGYDAATVIEVIEH------------LDENRLQAFEKVLFEFTR-PQTVIVSTPN 142 (219)
T ss_dssp -GGGTTCSEEEEESCGGG------------CCHHHHHHHHHHHHTTTC-CSEEEEEEEB
T ss_pred -cccCCCCEEEEHHHHHh------------CCHHHHHHHHHHHHHhhC-CCEEEEEccc
Confidence 23478999997653221 112235688999999998 9996666654
No 193
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=92.69 E-value=1.9 Score=38.79 Aligned_cols=138 Identities=17% Similarity=0.171 Sum_probs=79.2
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCC
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTH 92 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~ 92 (213)
.++.+||=+|=|.=.|++.||+. ...++|.-.+ .+ ..+ .+..|++...-.++ -...-|+.+.-....+...
T Consensus 285 ~~~~~VLDlgcG~G~~~~~la~~---~~~V~gvD~s-~~-al~---~A~~n~~~~~~~~v-~f~~~d~~~~l~~~~~~~~ 355 (433)
T 1uwv_A 285 QPEDRVLDLFCGMGNFTLPLATQ---AASVVGVEGV-PA-LVE---KGQQNARLNGLQNV-TFYHENLEEDVTKQPWAKN 355 (433)
T ss_dssp CTTCEEEEESCTTTTTHHHHHTT---SSEEEEEESC-HH-HHH---HHHHHHHHTTCCSE-EEEECCTTSCCSSSGGGTT
T ss_pred CCCCEEEECCCCCCHHHHHHHhh---CCEEEEEeCC-HH-HHH---HHHHHHHHcCCCce-EEEECCHHHHhhhhhhhcC
Confidence 45678999888877788888876 3577776554 33 333 25666643221123 3445577664332223356
Q ss_pred cccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCCCCcccHHhHHHHhCcEEEEEee
Q 044601 93 KFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDPYNKWELVKKAEKIGLTLQEVVP 172 (213)
Q Consensus 93 ~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py~~W~i~~lA~~~gl~l~~~~~ 172 (213)
.||.|+.|-|-.|.. .++.... -+. +++-|+|+-. |.....-...-.+.|+.+....+
T Consensus 356 ~fD~Vv~dPPr~g~~-------------~~~~~l~-----~~~-p~~ivyvsc~---p~tlard~~~l~~~Gy~~~~~~~ 413 (433)
T 1uwv_A 356 GFDKVLLDPARAGAA-------------GVMQQII-----KLE-PIRIVYVSCN---PATLARDSEALLKAGYTIARLAM 413 (433)
T ss_dssp CCSEEEECCCTTCCH-------------HHHHHHH-----HHC-CSEEEEEESC---HHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCEEEECCCCccHH-------------HHHHHHH-----hcC-CCeEEEEECC---hHHHHhhHHHHHHCCcEEEEEEE
Confidence 799999999998841 1222211 144 6666666532 22211111223456999999999
Q ss_pred cCCCCCCCCcc
Q 044601 173 FCKQDYPGYDN 183 (213)
Q Consensus 173 F~~~~yPgY~~ 183 (213)
|| .||.=.|
T Consensus 414 ~d--~Fp~t~H 422 (433)
T 1uwv_A 414 LD--MFPHTGH 422 (433)
T ss_dssp EC--CSTTSSC
T ss_pred ec--cCCCCCe
Confidence 96 5775444
No 194
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=92.67 E-value=1.5 Score=34.31 Aligned_cols=102 Identities=18% Similarity=0.134 Sum_probs=65.0
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccC
Q 044601 12 YSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRT 91 (213)
Q Consensus 12 y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~ 91 (213)
..+..+||=||=|.=.++..|++. +.++++.-.+ +++.+ .+..|+..+.-.++ -+..-|+.+... ..
T Consensus 75 ~~~~~~vLdiG~G~G~~~~~la~~---~~~v~~vD~~--~~~~~---~a~~~~~~~~~~~v-~~~~~d~~~~~~----~~ 141 (210)
T 3lbf_A 75 LTPQSRVLEIGTGSGYQTAILAHL---VQHVCSVERI--KGLQW---QARRRLKNLDLHNV-STRHGDGWQGWQ----AR 141 (210)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHH---SSEEEEEESC--HHHHH---HHHHHHHHTTCCSE-EEEESCGGGCCG----GG
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEecC--HHHHH---HHHHHHHHcCCCce-EEEECCcccCCc----cC
Confidence 356789999999988888888887 3577776655 33333 24555544322222 234456655321 24
Q ss_pred CcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEecc
Q 044601 92 HKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKE 147 (213)
Q Consensus 92 ~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~ 147 (213)
..||.|+.+.+..... ..+..+|+ ++|.+.+++.+
T Consensus 142 ~~~D~i~~~~~~~~~~--------------------~~~~~~L~-pgG~lv~~~~~ 176 (210)
T 3lbf_A 142 APFDAIIVTAAPPEIP--------------------TALMTQLD-EGGILVLPVGE 176 (210)
T ss_dssp CCEEEEEESSBCSSCC--------------------THHHHTEE-EEEEEEEEECS
T ss_pred CCccEEEEccchhhhh--------------------HHHHHhcc-cCcEEEEEEcC
Confidence 6899999974332210 03578898 99999999876
No 195
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=92.60 E-value=0.88 Score=37.18 Aligned_cols=48 Identities=27% Similarity=0.252 Sum_probs=34.7
Q ss_pred CCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEE
Q 044601 91 THKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVT 144 (213)
Q Consensus 91 ~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvT 144 (213)
...||.|+.|.|.......+. .........|++.+..+|+ ++|.+.++
T Consensus 166 ~~~fD~Iv~npp~~~~~~~~~-----~~~~~~~~~~l~~~~~~Lk-pgG~l~~~ 213 (250)
T 1o9g_A 166 GSAPDVVLTDLPYGERTHWEG-----QVPGQPVAGLLRSLASALP-AHAVIAVT 213 (250)
T ss_dssp TCCCSEEEEECCGGGSSSSSS-----CCCHHHHHHHHHHHHHHSC-TTCEEEEE
T ss_pred CCCceEEEeCCCeeccccccc-----cccccHHHHHHHHHHHhcC-CCcEEEEe
Confidence 347999999998776421100 0124667789999999998 99999884
No 196
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=92.57 E-value=0.75 Score=35.61 Aligned_cols=125 Identities=18% Similarity=0.159 Sum_probs=73.6
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCCc
Q 044601 14 SKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTHK 93 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~~ 93 (213)
+..+||=||=|.=.++..|++.. .++|.-.+ +++.+. ..++.++ .-|+.+ .+....
T Consensus 23 ~~~~vLD~GcG~G~~~~~l~~~~----~v~gvD~s--~~~~~~------------~~~~~~~-~~d~~~-----~~~~~~ 78 (170)
T 3q87_B 23 EMKIVLDLGTSTGVITEQLRKRN----TVVSTDLN--IRALES------------HRGGNLV-RADLLC-----SINQES 78 (170)
T ss_dssp CSCEEEEETCTTCHHHHHHTTTS----EEEEEESC--HHHHHT------------CSSSCEE-ECSTTT-----TBCGGG
T ss_pred CCCeEEEeccCccHHHHHHHhcC----cEEEEECC--HHHHhc------------ccCCeEE-ECChhh-----hcccCC
Confidence 46799999999888888888763 66665544 222222 2344433 345544 122378
Q ss_pred ccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCCCCcccHHhHHHHhCcEEEEEe
Q 044601 94 FDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDPYNKWELVKKAEKIGLTLQEVV 171 (213)
Q Consensus 94 FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py~~W~i~~lA~~~gl~l~~~~ 171 (213)
||.|+.|.|.......+. -..-.....++..+++.+ ++|.+.+..... ...-.+..+.++.||......
T Consensus 79 fD~i~~n~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l------pgG~l~~~~~~~--~~~~~l~~~l~~~gf~~~~~~ 147 (170)
T 3q87_B 79 VDVVVFNPPYVPDTDDPI-IGGGYLGREVIDRFVDAV------TVGMLYLLVIEA--NRPKEVLARLEERGYGTRILK 147 (170)
T ss_dssp CSEEEECCCCBTTCCCTT-TBCCGGGCHHHHHHHHHC------CSSEEEEEEEGG--GCHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEECCCCccCCcccc-ccCCcchHHHHHHHHhhC------CCCEEEEEEecC--CCHHHHHHHHHHCCCcEEEEE
Confidence 999999999764211000 000012234555555433 799998876432 244566778888999876654
No 197
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=92.49 E-value=0.47 Score=41.94 Aligned_cols=128 Identities=13% Similarity=0.075 Sum_probs=80.6
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEE----eeeccccCCCcc
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFY----GVDAMQMSQHFF 88 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~----gVDAt~L~~~~~ 88 (213)
.+..+||=||=|+=.++..|++. +.++++.-.. .+ + ++..++.|..+.. ..|+..+ +
T Consensus 106 ~~~~~VLDiGcG~G~~~~~l~~~---g~~v~gvD~s-~~-~----------~~~a~~~~~~~~~~~~~~~~~~~l----~ 166 (416)
T 4e2x_A 106 GPDPFIVEIGCNDGIMLRTIQEA---GVRHLGFEPS-SG-V----------AAKAREKGIRVRTDFFEKATADDV----R 166 (416)
T ss_dssp SSSCEEEEETCTTTTTHHHHHHT---TCEEEEECCC-HH-H----------HHHHHTTTCCEECSCCSHHHHHHH----H
T ss_pred CCCCEEEEecCCCCHHHHHHHHc---CCcEEEECCC-HH-H----------HHHHHHcCCCcceeeechhhHhhc----c
Confidence 46789999998888888888875 2466554332 22 2 2233344554432 1222222 1
Q ss_pred ccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEecc-------CC----------CC
Q 044601 89 LRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKE-------GD----------PY 151 (213)
Q Consensus 89 l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~-------~~----------py 151 (213)
.....||.|+.++-.--.. =...|++.+..+|+ |+|.+.++... .. .+
T Consensus 167 ~~~~~fD~I~~~~vl~h~~--------------d~~~~l~~~~r~Lk-pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (416)
T 4e2x_A 167 RTEGPANVIYAANTLCHIP--------------YVQSVLEGVDALLA-PDGVFVFEDPYLGDIVAKTSFDQIFDEHFFLF 231 (416)
T ss_dssp HHHCCEEEEEEESCGGGCT--------------THHHHHHHHHHHEE-EEEEEEEEEECHHHHHHHTCGGGCSTTCCEEC
T ss_pred cCCCCEEEEEECChHHhcC--------------CHHHHHHHHHHHcC-CCeEEEEEeCChHHhhhhcchhhhhhhhhhcC
Confidence 2357899999885421110 13578999999998 99999987532 10 01
Q ss_pred CcccHHhHHHHhCcEEEEEeecC
Q 044601 152 NKWELVKKAEKIGLTLQEVVPFC 174 (213)
Q Consensus 152 ~~W~i~~lA~~~gl~l~~~~~F~ 174 (213)
+.-.+..+.+++||.+.+...+.
T Consensus 232 s~~~l~~ll~~aGf~~~~~~~~~ 254 (416)
T 4e2x_A 232 SATSVQGMAQRCGFELVDVQRLP 254 (416)
T ss_dssp CHHHHHHHHHHTTEEEEEEEEEC
T ss_pred CHHHHHHHHHHcCCEEEEEEEcc
Confidence 22357789999999999987763
No 198
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=92.37 E-value=0.94 Score=39.19 Aligned_cols=132 Identities=20% Similarity=0.210 Sum_probs=79.9
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccC
Q 044601 12 YSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRT 91 (213)
Q Consensus 12 y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~ 91 (213)
+++..+||=||=|.=.++..|++++. .+.+|.+|-.+.+.+.. ++.....+-.-...-|+. ... .
T Consensus 182 ~~~~~~vLDvG~G~G~~~~~l~~~~p---~~~~~~~D~~~~~~~~~------~~~~~~~~~v~~~~~d~~---~~~---p 246 (348)
T 3lst_A 182 FPATGTVADVGGGRGGFLLTVLREHP---GLQGVLLDRAEVVARHR------LDAPDVAGRWKVVEGDFL---REV---P 246 (348)
T ss_dssp CCSSEEEEEETCTTSHHHHHHHHHCT---TEEEEEEECHHHHTTCC------CCCGGGTTSEEEEECCTT---TCC---C
T ss_pred ccCCceEEEECCccCHHHHHHHHHCC---CCEEEEecCHHHhhccc------ccccCCCCCeEEEecCCC---CCC---C
Confidence 45678999999999999999999873 44567777643333110 100001111223344554 111 2
Q ss_pred CcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccC-C---------------------
Q 044601 92 HKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEG-D--------------------- 149 (213)
Q Consensus 92 ~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~-~--------------------- 149 (213)
.||.|+.+.-.--. ...-...+++.+..+|+ |+|.+.|.-... .
T Consensus 247 -~~D~v~~~~vlh~~------------~d~~~~~~L~~~~~~Lk-pgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~ 312 (348)
T 3lst_A 247 -HADVHVLKRILHNW------------GDEDSVRILTNCRRVMP-AHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQ 312 (348)
T ss_dssp -CCSEEEEESCGGGS------------CHHHHHHHHHHHHHTCC-TTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCC
T ss_pred -CCcEEEEehhccCC------------CHHHHHHHHHHHHHhcC-CCCEEEEEEeccCCCCCcchhhhcChhhhhcCCCc
Confidence 79999987643221 11223467888999998 999988753211 1
Q ss_pred CCCcccHHhHHHHhCcEEEEEee
Q 044601 150 PYNKWELVKKAEKIGLTLQEVVP 172 (213)
Q Consensus 150 py~~W~i~~lA~~~gl~l~~~~~ 172 (213)
.++.=++..+.+++||...+..+
T Consensus 313 ~~t~~e~~~ll~~aGf~~~~~~~ 335 (348)
T 3lst_A 313 ERTAAELEPLFTAAGLRLDRVVG 335 (348)
T ss_dssp CCBHHHHHHHHHHTTEEEEEEEE
T ss_pred CCCHHHHHHHHHHCCCceEEEEE
Confidence 11222355778899999998877
No 199
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=92.33 E-value=3.6 Score=34.52 Aligned_cols=138 Identities=17% Similarity=0.171 Sum_probs=76.7
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHH-----HHHHh-----CCCEEEEeeeccc
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNV-----RELEE-----RGCLVFYGVDAMQ 82 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni-----~~L~~-----~g~~V~~gVDAt~ 82 (213)
.++.+||=||=|.=.++.+|++. + ...|+|+-+-+.+.+.. +..|+ +...- ..+.+. ..|...
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~-~-~~~v~~~D~s~~~~~~~----a~~n~~~N~~~~~~~~~~~~~~v~~~-~~~~~~ 150 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLA-G-ADQVVATDYPDPEILNS----LESNIREHTANSCSSETVKRASPKVV-PYRWGD 150 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHT-T-CSEEEEEECSCHHHHHH----HHHHHHTTCC----------CCCEEE-ECCTTS
T ss_pred cCCCeEEEecccccHHHHHHHHc-C-CCEEEEEeCCCHHHHHH----HHHHHHHhhhhhcccccCCCCCeEEE-EecCCC
Confidence 35789999998877788888765 3 44888888722333322 44454 21110 123333 223222
Q ss_pred cCCCcc--ccCCcccEEEE-cCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhccc--C--CCeEEEEeccCCC---CC
Q 044601 83 MSQHFF--LRTHKFDRVIY-NFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKE--E--NGEIHVTHKEGDP---YN 152 (213)
Q Consensus 83 L~~~~~--l~~~~FDrIiF-NFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~--~--~G~ihvTl~~~~p---y~ 152 (213)
...... +....||.||. +-++.- ..+..++..+..+|+. + +|.+.|......| ..
T Consensus 151 ~~~~~~~~~~~~~fD~Ii~~dvl~~~---------------~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~~~~~~~ 215 (281)
T 3bzb_A 151 SPDSLQRCTGLQRFQVVLLADLLSFH---------------QAHDALLRSVKMLLALPANDPTAVALVTFTHHRPHLAER 215 (281)
T ss_dssp CTHHHHHHHSCSSBSEEEEESCCSCG---------------GGHHHHHHHHHHHBCCTTTCTTCEEEEEECC--------
T ss_pred ccHHHHhhccCCCCCEEEEeCcccCh---------------HHHHHHHHHHHHHhcccCCCCCCEEEEEEEeeecccchh
Confidence 111110 02468999997 333321 1134566777888841 5 9998887665443 23
Q ss_pred cccHHhHHHHhC-cEEEEEee
Q 044601 153 KWELVKKAEKIG-LTLQEVVP 172 (213)
Q Consensus 153 ~W~i~~lA~~~g-l~l~~~~~ 172 (213)
.-.+...+++.| |.+.....
T Consensus 216 ~~~~~~~l~~~G~f~v~~~~~ 236 (281)
T 3bzb_A 216 DLAFFRLVNADGALIAEPWLS 236 (281)
T ss_dssp CTHHHHHHHHSTTEEEEEEEC
T ss_pred HHHHHHHHHhcCCEEEEEecc
Confidence 456667788899 99887754
No 200
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=92.32 E-value=0.21 Score=40.59 Aligned_cols=109 Identities=17% Similarity=0.111 Sum_probs=67.7
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEE-EEeeeccccCCCccccC
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLV-FYGVDAMQMSQHFFLRT 91 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V-~~gVDAt~L~~~~~l~~ 91 (213)
.+..+||=||=|.=.++..|++.. ...+++ .|-.+++.+. +..+ .+..|..| +..-|+.++.. ++..
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~~--~~~v~g--vD~s~~~l~~---a~~~---~~~~~~~v~~~~~d~~~~~~--~~~~ 126 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEAP--IDEHWI--IECNDGVFQR---LRDW---APRQTHKVIPLKGLWEDVAP--TLPD 126 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSC--EEEEEE--EECCHHHHHH---HHHH---GGGCSSEEEEEESCHHHHGG--GSCT
T ss_pred CCCCeEEEEeccCCHHHHHHHhcC--CCeEEE--EcCCHHHHHH---HHHH---HHhcCCCeEEEecCHHHhhc--ccCC
Confidence 457899999998888888886542 236665 4532333331 3332 23344444 34557776532 2345
Q ss_pred CcccEEEE-cCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEE
Q 044601 92 HKFDRVIY-NFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVT 144 (213)
Q Consensus 92 ~~FDrIiF-NFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvT 144 (213)
..||.|+. .|+. ... ..+......+++.+..+|+ |+|.+.+.
T Consensus 127 ~~fD~V~~d~~~~-~~~---------~~~~~~~~~~l~~~~r~Lk-pgG~l~~~ 169 (236)
T 1zx0_A 127 GHFDGILYDTYPL-SEE---------TWHTHQFNFIKNHAFRLLK-PGGVLTYC 169 (236)
T ss_dssp TCEEEEEECCCCC-BGG---------GTTTHHHHHHHHTHHHHEE-EEEEEEEC
T ss_pred CceEEEEECCccc-chh---------hhhhhhHHHHHHHHHHhcC-CCeEEEEE
Confidence 78999999 6664 110 1233455678999999998 99998765
No 201
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=92.24 E-value=0.83 Score=35.01 Aligned_cols=112 Identities=13% Similarity=0.090 Sum_probs=64.0
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccC
Q 044601 12 YSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRT 91 (213)
Q Consensus 12 y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~ 91 (213)
-.++++||.||.|. ...|.-+++.+. +.++. .. .+.+ ...|++++... ....
T Consensus 10 ~~~g~~vL~~~~g~-------------------v~vD~s~~ml~~---a~~~~---~~-~~~~-~~~d~~~~~~~-~~~~ 61 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS-------------------SPVEALKGLVDK---LQALT---GN-EGRV-SVENIKQLLQS-AHKE 61 (176)
T ss_dssp CCTTSEEEEEECTT-------------------SCHHHHHHHHHH---HHHHT---TT-TSEE-EEEEGGGGGGG-CCCS
T ss_pred CCCCCEEEEecCCc-------------------eeeeCCHHHHHH---HHHhc---cc-CcEE-EEechhcCccc-cCCC
Confidence 45789999999984 114433333221 22211 11 2443 45688876521 0135
Q ss_pred CcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCC----CCCcc---cHHhHHHHhC
Q 044601 92 HKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGD----PYNKW---ELVKKAEKIG 164 (213)
Q Consensus 92 ~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~----py~~W---~i~~lA~~~g 164 (213)
..||.|+.++-..-. .++ +..+++.+..+|+ |+|.+.+...... +...+ .+..+.+++|
T Consensus 62 ~~fD~V~~~~~l~~~--~~~-----------~~~~l~~~~r~Lk-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG 127 (176)
T 2ld4_A 62 SSFDIILSGLVPGST--TLH-----------SAEILAEIARILR-PGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSG 127 (176)
T ss_dssp SCEEEEEECCSTTCC--CCC-----------CHHHHHHHHHHEE-EEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTT
T ss_pred CCEeEEEECChhhhc--ccC-----------HHHHHHHHHHHCC-CCEEEEEEcccccccccccccCCHHHHHHHHHHCC
Confidence 789999987532211 011 1468889999998 9999988643211 11122 3456778899
Q ss_pred c
Q 044601 165 L 165 (213)
Q Consensus 165 l 165 (213)
|
T Consensus 128 f 128 (176)
T 2ld4_A 128 L 128 (176)
T ss_dssp C
T ss_pred C
Confidence 9
No 202
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=92.20 E-value=0.44 Score=41.40 Aligned_cols=127 Identities=15% Similarity=0.084 Sum_probs=77.4
Q ss_pred CCCCCeEEEEecCC------hhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCC
Q 044601 12 YSSKQRILLVGEGD------FSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQ 85 (213)
Q Consensus 12 y~~~~~ILlVGEGn------FSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~ 85 (213)
..++++||=+|=|. =| ..+++..+....|+|.=+... + .++++...-|++++..
T Consensus 61 l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~----------------v--~~v~~~i~gD~~~~~~ 120 (290)
T 2xyq_A 61 VPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF----------------V--SDADSTLIGDCATVHT 120 (290)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC----------------B--CSSSEEEESCGGGCCC
T ss_pred CCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC----------------C--CCCEEEEECccccCCc
Confidence 45688999999922 33 334555554567888766643 1 2565513447776531
Q ss_pred CccccCCcccEEEEcCCcC--CCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCCCCcccHHhHHHHh
Q 044601 86 HFFLRTHKFDRVIYNFPHV--GFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDPYNKWELVKKAEKI 163 (213)
Q Consensus 86 ~~~l~~~~FDrIiFNFPH~--G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py~~W~i~~lA~~~ 163 (213)
...||.|+-|.++. |.... +. .....++...++.+..+|+ ++|.+.+....+... -.+..+.++.
T Consensus 121 -----~~~fD~Vvsn~~~~~~g~~~~-d~----~~~~~l~~~~l~~a~r~Lk-pGG~~v~~~~~~~~~--~~l~~~l~~~ 187 (290)
T 2xyq_A 121 -----ANKWDLIISDMYDPRTKHVTK-EN----DSKEGFFTYLCGFIKQKLA-LGGSIAVKITEHSWN--ADLYKLMGHF 187 (290)
T ss_dssp -----SSCEEEEEECCCCCC---CCS-CC----CCCCTHHHHHHHHHHHHEE-EEEEEEEEECSSSCC--HHHHHHHTTE
T ss_pred -----cCcccEEEEcCCccccccccc-cc----cchHHHHHHHHHHHHHhcC-CCcEEEEEEeccCCH--HHHHHHHHHc
Confidence 25799999997532 22111 10 1123566788999999998 999999876554322 2566666777
Q ss_pred CcEEEEEe
Q 044601 164 GLTLQEVV 171 (213)
Q Consensus 164 gl~l~~~~ 171 (213)
|+.-++..
T Consensus 188 GF~~v~~~ 195 (290)
T 2xyq_A 188 SWWTAFVT 195 (290)
T ss_dssp EEEEEEEE
T ss_pred CCcEEEEE
Confidence 77555443
No 203
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=92.12 E-value=0.52 Score=41.17 Aligned_cols=106 Identities=23% Similarity=0.152 Sum_probs=65.8
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHh-CCCEEEEeeeccccCCCccccC
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEE-RGCLVFYGVDAMQMSQHFFLRT 91 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~-~g~~V~~gVDAt~L~~~~~l~~ 91 (213)
.++.+||=||=|.=.++..++++ + ...|+|.-... .+ + .+..+++...- ..++ +..-|+..+. + .
T Consensus 49 ~~~~~VLDiGcGtG~ls~~la~~-g-~~~V~~vD~s~--~~-~---~a~~~~~~~~l~~~v~-~~~~d~~~~~----~-~ 114 (348)
T 2y1w_A 49 FKDKIVLDVGCGSGILSFFAAQA-G-ARKIYAVEAST--MA-Q---HAEVLVKSNNLTDRIV-VIPGKVEEVS----L-P 114 (348)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHT-T-CSEEEEEECST--HH-H---HHHHHHHHTTCTTTEE-EEESCTTTCC----C-S
T ss_pred CCcCEEEEcCCCccHHHHHHHhC-C-CCEEEEECCHH--HH-H---HHHHHHHHcCCCCcEE-EEEcchhhCC----C-C
Confidence 36789999999998888888875 3 45888877652 22 2 24444433211 1233 3455776653 1 2
Q ss_pred CcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEe
Q 044601 92 HKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTH 145 (213)
Q Consensus 92 ~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl 145 (213)
.+||.||.+.+..... + .-+...+..+..+|+ ++|.+.++.
T Consensus 115 ~~~D~Ivs~~~~~~~~-----------~-~~~~~~l~~~~~~Lk-pgG~li~~~ 155 (348)
T 2y1w_A 115 EQVDIIISEPMGYMLF-----------N-ERMLESYLHAKKYLK-PSGNMFPTI 155 (348)
T ss_dssp SCEEEEEECCCBTTBT-----------T-TSHHHHHHHGGGGEE-EEEEEESCE
T ss_pred CceeEEEEeCchhcCC-----------h-HHHHHHHHHHHhhcC-CCeEEEEec
Confidence 5799999987633211 0 112345667889998 999986543
No 204
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=92.06 E-value=4.1 Score=33.00 Aligned_cols=150 Identities=16% Similarity=0.090 Sum_probs=80.4
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCC-CEEEEeeeccc-cCCCcccc-
Q 044601 14 SKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERG-CLVFYGVDAMQ-MSQHFFLR- 90 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g-~~V~~gVDAt~-L~~~~~l~- 90 (213)
+..+||=+|=|.=.++..|++... +..+++.-.+ . ++.+ .+..|++...-.+ +.+ ..-|+.+ +.+.....
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~-~~~v~gvD~s-~-~~~~---~a~~~~~~~~~~~~v~~-~~~d~~~~~~~~~~~~~ 137 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLN-GWYFLATEVD-D-MCFN---YAKKNVEQNNLSDLIKV-VKVPQKTLLMDALKEES 137 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHH-CCEEEEEESC-H-HHHH---HHHHHHHHTTCTTTEEE-EECCTTCSSTTTSTTCC
T ss_pred CCCEEEEeCCChhHHHHHHHHhCC-CCeEEEEECC-H-HHHH---HHHHHHHHcCCCccEEE-EEcchhhhhhhhhhccc
Confidence 467999999887777788887753 4567766554 2 3333 2556665432112 344 4457766 23222111
Q ss_pred CCcccEEEEcCCcCCCcc-ccc-chHHH-----------------Hh--hHHHHHHHHHHHHhhcccCCCeEEEEeccCC
Q 044601 91 THKFDRVIYNFPHVGFIF-REN-SYCQI-----------------QL--NKELVKGFLRNAKLLLKEENGEIHVTHKEGD 149 (213)
Q Consensus 91 ~~~FDrIiFNFPH~G~~~-~e~-~~~~i-----------------~~--n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~ 149 (213)
...||.|+.|-|...... ... ..+.+ +. --.++..++..+..+++ +.|.++..+. .
T Consensus 138 ~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~~~~~~~~~~l~-~~g~~~~~~~--~ 214 (254)
T 2h00_A 138 EIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKK-RLRWYSCMLG--K 214 (254)
T ss_dssp SCCBSEEEECCCCC-------------------------CTTTTHHHHTHHHHHHHHHHHHHHHGG-GBSCEEEEES--S
T ss_pred CCcccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEHHHHHHHHhccc-ceEEEEECCC--C
Confidence 257999999988765320 000 00000 00 01233445555666776 7887776542 2
Q ss_pred CCCcccHHhHHHHhCcEEEEEeec
Q 044601 150 PYNKWELVKKAEKIGLTLQEVVPF 173 (213)
Q Consensus 150 py~~W~i~~lA~~~gl~l~~~~~F 173 (213)
+...=.+..+.+++|+.-++..++
T Consensus 215 ~~~~~~~~~~l~~~Gf~~v~~~~~ 238 (254)
T 2h00_A 215 KCSLAPLKEELRIQGVPKVTYTEF 238 (254)
T ss_dssp TTSHHHHHHHHHHTTCSEEEEEEE
T ss_pred hhHHHHHHHHHHHcCCCceEEEEE
Confidence 222124666888999977766554
No 205
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=91.69 E-value=0.38 Score=39.57 Aligned_cols=97 Identities=10% Similarity=0.129 Sum_probs=63.3
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCC
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTH 92 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~ 92 (213)
.+..+||-||=|.=.++..|++.++ +..+++.-.+ .+ ..+. +..+. .++. +...|+..+. +...
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~vD~s-~~-~~~~---a~~~~-----~~~~-~~~~d~~~~~----~~~~ 147 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALP-EITTFGLDVS-KV-AIKA---AAKRY-----PQVT-FCVASSHRLP----FSDT 147 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCT-TSEEEEEESC-HH-HHHH---HHHHC-----TTSE-EEECCTTSCS----BCTT
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCC-CCeEEEEeCC-HH-HHHH---HHHhC-----CCcE-EEEcchhhCC----CCCC
Confidence 4678999999999888889988763 4577776544 22 2221 22111 1233 3344666653 3356
Q ss_pred cccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEecc
Q 044601 93 KFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKE 147 (213)
Q Consensus 93 ~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~ 147 (213)
.||.|+.+++. .++..+..+|+ |+|.+.+....
T Consensus 148 ~fD~v~~~~~~---------------------~~l~~~~~~L~-pgG~l~~~~~~ 180 (269)
T 1p91_A 148 SMDAIIRIYAP---------------------CKAEELARVVK-PGGWVITATPG 180 (269)
T ss_dssp CEEEEEEESCC---------------------CCHHHHHHHEE-EEEEEEEEEEC
T ss_pred ceeEEEEeCCh---------------------hhHHHHHHhcC-CCcEEEEEEcC
Confidence 89999987651 24677889998 99998887643
No 206
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=91.62 E-value=0.52 Score=39.14 Aligned_cols=113 Identities=17% Similarity=0.197 Sum_probs=69.1
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHh----CCCEEEEeeeccccCCCccc
Q 044601 14 SKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEE----RGCLVFYGVDAMQMSQHFFL 89 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~----~g~~V~~gVDAt~L~~~~~l 89 (213)
+..+||=||=|.=.++..|++. +..++++-.+ .+.+.. +..++..... ..+ .+...|+..+.... +
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s-~~~l~~----a~~~~~~~~~~~~~~~~-~~~~~d~~~~~~~~-~ 126 (293)
T 3thr_A 57 GCHRVLDVACGTGVDSIMLVEE---GFSVTSVDAS-DKMLKY----ALKERWNRRKEPAFDKW-VIEEANWLTLDKDV-P 126 (293)
T ss_dssp TCCEEEETTCTTSHHHHHHHHT---TCEEEEEESC-HHHHHH----HHHHHHHTTTSHHHHTC-EEEECCGGGHHHHS-C
T ss_pred CCCEEEEecCCCCHHHHHHHHC---CCeEEEEECC-HHHHHH----HHHhhhhccccccccee-eEeecChhhCcccc-c
Confidence 5689999999998899999876 2377666554 222222 3333321111 122 34455666654221 2
Q ss_pred cCCcccEEEEc---CCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEec
Q 044601 90 RTHKFDRVIYN---FPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHK 146 (213)
Q Consensus 90 ~~~~FDrIiFN---FPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~ 146 (213)
....||.|+.+ +.|+... .........+++.+..+|+ |+|.+.++..
T Consensus 127 ~~~~fD~V~~~g~~l~~~~~~---------~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~ 176 (293)
T 3thr_A 127 AGDGFDAVICLGNSFAHLPDS---------KGDQSEHRLALKNIASMVR-PGGLLVIDHR 176 (293)
T ss_dssp CTTCEEEEEECTTCGGGSCCS---------SSSSHHHHHHHHHHHHTEE-EEEEEEEEEE
T ss_pred cCCCeEEEEEcChHHhhcCcc---------ccCHHHHHHHHHHHHHHcC-CCeEEEEEeC
Confidence 45789999975 3444320 0112445678899999998 9999998864
No 207
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=91.60 E-value=0.61 Score=36.67 Aligned_cols=99 Identities=17% Similarity=0.104 Sum_probs=61.7
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCCc
Q 044601 14 SKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTHK 93 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~~ 93 (213)
+..+||=||=|.=.++..| + ...+++.-.+ +++.+. +..+. .++.++ ..|+..+. +....
T Consensus 36 ~~~~vLdiG~G~G~~~~~l----~-~~~v~~vD~s--~~~~~~---a~~~~-----~~~~~~-~~d~~~~~----~~~~~ 95 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL----P-YPQKVGVEPS--EAMLAV---GRRRA-----PEATWV-RAWGEALP----FPGES 95 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC----C-CSEEEEECCC--HHHHHH---HHHHC-----TTSEEE-CCCTTSCC----SCSSC
T ss_pred CCCeEEEECCCCCHhHHhC----C-CCeEEEEeCC--HHHHHH---HHHhC-----CCcEEE-EcccccCC----CCCCc
Confidence 6789999988877777766 2 2266665443 222221 22222 345554 44776653 34578
Q ss_pred ccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEecc
Q 044601 94 FDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKE 147 (213)
Q Consensus 94 FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~ 147 (213)
||.|+.++..--.. + ...+++.+..+|+ |+|.+.|+...
T Consensus 96 fD~v~~~~~l~~~~-----------~---~~~~l~~~~~~L~-pgG~l~i~~~~ 134 (211)
T 2gs9_A 96 FDVVLLFTTLEFVE-----------D---VERVLLEARRVLR-PGGALVVGVLE 134 (211)
T ss_dssp EEEEEEESCTTTCS-----------C---HHHHHHHHHHHEE-EEEEEEEEEEC
T ss_pred EEEEEEcChhhhcC-----------C---HHHHHHHHHHHcC-CCCEEEEEecC
Confidence 99999886532211 0 2378888999998 99999888643
No 208
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=91.47 E-value=0.64 Score=38.30 Aligned_cols=103 Identities=13% Similarity=0.105 Sum_probs=66.6
Q ss_pred CCCeEEEEecCChhHHHHHHHH---hCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCcccc
Q 044601 14 SKQRILLVGEGDFSFSLCLARE---FGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLR 90 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~---~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~ 90 (213)
+.++||=||=|.=..+..|++. .+.+..|+|.-.+.+. .+ .+. .+ ..+++++.+ |+..+..-..+.
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~--l~---~a~----~~-~~~v~~~~g-D~~~~~~l~~~~ 149 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSR--CQ---IPA----SD-MENITLHQG-DCSDLTTFEHLR 149 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTT--CC---CCG----GG-CTTEEEEEC-CSSCSGGGGGGS
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHH--HH---HHh----cc-CCceEEEEC-cchhHHHHHhhc
Confidence 4679999999988888888887 4456688877666431 11 111 11 134666665 887742111123
Q ss_pred CCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHh-hcccCCCeEEEEe
Q 044601 91 THKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKL-LLKEENGEIHVTH 145 (213)
Q Consensus 91 ~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~-~L~~~~G~ihvTl 145 (213)
...||.|+.+..|.. +..+|..+.. +|+ ++|.+.+.-
T Consensus 150 ~~~fD~I~~d~~~~~-----------------~~~~l~~~~r~~Lk-pGG~lv~~d 187 (236)
T 2bm8_A 150 EMAHPLIFIDNAHAN-----------------TFNIMKWAVDHLLE-EGDYFIIED 187 (236)
T ss_dssp SSCSSEEEEESSCSS-----------------HHHHHHHHHHHTCC-TTCEEEECS
T ss_pred cCCCCEEEECCchHh-----------------HHHHHHHHHHhhCC-CCCEEEEEe
Confidence 347999999887621 1247777785 998 999998853
No 209
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=90.86 E-value=0.74 Score=37.13 Aligned_cols=111 Identities=9% Similarity=0.058 Sum_probs=67.2
Q ss_pred cCCCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccc
Q 044601 10 NHYSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFL 89 (213)
Q Consensus 10 ~~y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l 89 (213)
.+..+..+||=||=|.=.++..|++... ++++.-.+ +++.+. +..+. ...++. ....|+.++.....+
T Consensus 52 ~~~~~~~~vLD~GcG~G~~~~~la~~~~---~v~gvD~s--~~~~~~---a~~~~---~~~~~~-~~~~d~~~~~~~~~~ 119 (245)
T 3ggd_A 52 LLFNPELPLIDFACGNGTQTKFLSQFFP---RVIGLDVS--KSALEI---AAKEN---TAANIS-YRLLDGLVPEQAAQI 119 (245)
T ss_dssp TTSCTTSCEEEETCTTSHHHHHHHHHSS---CEEEEESC--HHHHHH---HHHHS---CCTTEE-EEECCTTCHHHHHHH
T ss_pred hccCCCCeEEEEcCCCCHHHHHHHHhCC---CEEEEECC--HHHHHH---HHHhC---cccCce-EEECccccccccccc
Confidence 3456778999999999999999998752 67766544 222221 22222 112333 345577775432211
Q ss_pred c-CCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEe
Q 044601 90 R-THKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTH 145 (213)
Q Consensus 90 ~-~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl 145 (213)
. ...||.|+.+....-... .-...+++.+..+|+ |+|.+.|.-
T Consensus 120 ~~~~~~d~v~~~~~~~~~~~------------~~~~~~l~~~~~~Lk-pgG~l~i~~ 163 (245)
T 3ggd_A 120 HSEIGDANIYMRTGFHHIPV------------EKRELLGQSLRILLG-KQGAMYLIE 163 (245)
T ss_dssp HHHHCSCEEEEESSSTTSCG------------GGHHHHHHHHHHHHT-TTCEEEEEE
T ss_pred ccccCccEEEEcchhhcCCH------------HHHHHHHHHHHHHcC-CCCEEEEEe
Confidence 1 134999998865433210 112468888899998 999976664
No 210
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=90.28 E-value=2 Score=34.12 Aligned_cols=100 Identities=18% Similarity=0.148 Sum_probs=63.5
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCC-CEEEEeeeccccCCCcccc
Q 044601 12 YSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERG-CLVFYGVDAMQMSQHFFLR 90 (213)
Q Consensus 12 y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g-~~V~~gVDAt~L~~~~~l~ 90 (213)
..++.+||=||=|.=.++..|++.. ..+++.-.+ +++.+ .+..++ ...| +.+ ...|+.... . .
T Consensus 68 ~~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~~--~~~~~---~a~~~~---~~~~~v~~-~~~d~~~~~--~--~ 131 (231)
T 1vbf_A 68 LHKGQKVLEIGTGIGYYTALIAEIV---DKVVSVEIN--EKMYN---YASKLL---SYYNNIKL-ILGDGTLGY--E--E 131 (231)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHS---SEEEEEESC--HHHHH---HHHHHH---TTCSSEEE-EESCGGGCC--G--G
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHHc---CEEEEEeCC--HHHHH---HHHHHH---hhcCCeEE-EECCccccc--c--c
Confidence 3567899999999988899998874 577776555 22222 133333 3333 333 344666521 1 2
Q ss_pred CCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccC
Q 044601 91 THKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEG 148 (213)
Q Consensus 91 ~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~ 148 (213)
...||.|+.+.+.-... ..+..+|+ ++|.+.++....
T Consensus 132 ~~~fD~v~~~~~~~~~~--------------------~~~~~~L~-pgG~l~~~~~~~ 168 (231)
T 1vbf_A 132 EKPYDRVVVWATAPTLL--------------------CKPYEQLK-EGGIMILPIGVG 168 (231)
T ss_dssp GCCEEEEEESSBBSSCC--------------------HHHHHTEE-EEEEEEEEECSS
T ss_pred CCCccEEEECCcHHHHH--------------------HHHHHHcC-CCcEEEEEEcCC
Confidence 46799999987643320 13677898 999999887544
No 211
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=90.23 E-value=1.4 Score=39.46 Aligned_cols=119 Identities=18% Similarity=0.157 Sum_probs=69.8
Q ss_pred HHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhC-----CCEEEEeeeccccCCCccccCCcccEEEEcCCcC
Q 044601 30 LCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEER-----GCLVFYGVDAMQMSQHFFLRTHKFDRVIYNFPHV 104 (213)
Q Consensus 30 ~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~-----g~~V~~gVDAt~L~~~~~l~~~~FDrIiFNFPH~ 104 (213)
..||.. +....|+|.-.+ ..-+. ...+|++.+--. ....+...|++++... ....||+|+-+=|+.
T Consensus 164 ~~la~~-~~~~~l~A~D~~-~~R~~----~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~---~~~~fD~VLlDaPCS 234 (359)
T 4fzv_A 164 LALLQT-GCCRNLAANDLS-PSRIA----RLQKILHSYVPEEIRDGNQVRVTSWDGRKWGEL---EGDTYDRVLVDVPCT 234 (359)
T ss_dssp HHHHHT-TCEEEEEEECSC-HHHHH----HHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHH---STTCEEEEEEECCCC
T ss_pred HHHHHh-cCCCcEEEEcCC-HHHHH----HHHHHHHHhhhhhhccCCceEEEeCchhhcchh---ccccCCEEEECCccC
Confidence 344443 223457665443 22221 244566655221 2345667788877543 257899999999999
Q ss_pred CCc---cccc-------chHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCCCCcccHHh
Q 044601 105 GFI---FREN-------SYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDPYNKWELVK 158 (213)
Q Consensus 105 G~~---~~e~-------~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py~~W~i~~ 158 (213)
|.+ ...+ ....+.....|=...+.+|..+|+ ++|.+.=+-|+=.|-..-.++.
T Consensus 235 g~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lk-pGG~LVYsTCSl~~~ENE~vV~ 297 (359)
T 4fzv_A 235 TDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATK-PGGHVVYSTCSLSHLQNEYVVQ 297 (359)
T ss_dssp CHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEE-EEEEEEEEESCCCTTTTHHHHH
T ss_pred CCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCC-CCcEEEEEeCCCchhhCHHHHH
Confidence 831 1111 123333334444677889999998 9999887777766665544443
No 212
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=90.20 E-value=4 Score=35.86 Aligned_cols=135 Identities=18% Similarity=0.132 Sum_probs=81.7
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCC---EEEEeeeccccCCCccc
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGC---LVFYGVDAMQMSQHFFL 89 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~---~V~~gVDAt~L~~~~~l 89 (213)
.++.+||=+|=|.=.++..+|+.. ....|++.-.+. +.+ + .+..|++. .|+ .-+..-|+.++..
T Consensus 216 ~~~~~vLD~gCGsG~~~i~~a~~~-~~~~v~g~Dis~-~~l-~---~A~~n~~~---~gl~~~i~~~~~D~~~~~~---- 282 (373)
T 3tm4_A 216 LDGGSVLDPMCGSGTILIELALRR-YSGEIIGIEKYR-KHL-I---GAEMNALA---AGVLDKIKFIQGDATQLSQ---- 282 (373)
T ss_dssp CCSCCEEETTCTTCHHHHHHHHTT-CCSCEEEEESCH-HHH-H---HHHHHHHH---TTCGGGCEEEECCGGGGGG----
T ss_pred CCCCEEEEccCcCcHHHHHHHHhC-CCCeEEEEeCCH-HHH-H---HHHHHHHH---cCCCCceEEEECChhhCCc----
Confidence 467788887777667777777653 234777776663 222 2 25556543 343 2345568887642
Q ss_pred cCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCCCCcccHHhHHHHhCcEEEE
Q 044601 90 RTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDPYNKWELVKKAEKIGLTLQE 169 (213)
Q Consensus 90 ~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py~~W~i~~lA~~~gl~l~~ 169 (213)
....||.||.|.|.--..+. ......|...|+..++.+|. ++-+.|+- +.-.++.+..+.|+...+
T Consensus 283 ~~~~fD~Ii~npPyg~r~~~------~~~~~~ly~~~~~~l~r~l~--g~~~~i~~------~~~~~~~~~~~~G~~~~~ 348 (373)
T 3tm4_A 283 YVDSVDFAISNLPYGLKIGK------KSMIPDLYMKFFNELAKVLE--KRGVFITT------EKKAIEEAIAENGFEIIH 348 (373)
T ss_dssp TCSCEEEEEEECCCC------------CCHHHHHHHHHHHHHHHEE--EEEEEEES------CHHHHHHHHHHTTEEEEE
T ss_pred ccCCcCEEEECCCCCcccCc------chhHHHHHHHHHHHHHHHcC--CeEEEEEC------CHHHHHHHHHHcCCEEEE
Confidence 24679999999995332111 11345667888999999882 33344432 223355567788999988
Q ss_pred EeecC
Q 044601 170 VVPFC 174 (213)
Q Consensus 170 ~~~F~ 174 (213)
..++.
T Consensus 349 ~~~~~ 353 (373)
T 3tm4_A 349 HRVIG 353 (373)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 87764
No 213
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=90.15 E-value=2.9 Score=37.89 Aligned_cols=129 Identities=20% Similarity=0.215 Sum_probs=76.1
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccC
Q 044601 12 YSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRT 91 (213)
Q Consensus 12 y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~ 91 (213)
..++.+||=+|=|.=.|++.||+. +..++|.-.+ ++..+ .+..|++... ..+ -...-|+.++..
T Consensus 288 ~~~~~~VLDlgcG~G~~sl~la~~---~~~V~gvD~s--~~ai~---~A~~n~~~ng-l~v-~~~~~d~~~~~~------ 351 (425)
T 2jjq_A 288 LVEGEKILDMYSGVGTFGIYLAKR---GFNVKGFDSN--EFAIE---MARRNVEINN-VDA-EFEVASDREVSV------ 351 (425)
T ss_dssp HCCSSEEEEETCTTTHHHHHHHHT---TCEEEEEESC--HHHHH---HHHHHHHHHT-CCE-EEEECCTTTCCC------
T ss_pred cCCCCEEEEeeccchHHHHHHHHc---CCEEEEEECC--HHHHH---HHHHHHHHcC-CcE-EEEECChHHcCc------
Confidence 356789999988888888888875 3467766554 33333 3556654321 222 344457766531
Q ss_pred CcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCCCC-cccHHhHHHHhCcEEEEE
Q 044601 92 HKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDPYN-KWELVKKAEKIGLTLQEV 170 (213)
Q Consensus 92 ~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py~-~W~i~~lA~~~gl~l~~~ 170 (213)
..||.||.|-|..|.. ..+ ++... .|+ ++|.|+|+-. |.. .-++..|. |.+.+.
T Consensus 352 ~~fD~Vv~dPPr~g~~------------~~~----~~~l~-~l~-p~givyvsc~---p~tlarDl~~l~----y~l~~~ 406 (425)
T 2jjq_A 352 KGFDTVIVDPPRAGLH------------PRL----VKRLN-REK-PGVIVYVSCN---PETFARDVKMLD----YRIDEI 406 (425)
T ss_dssp TTCSEEEECCCTTCSC------------HHH----HHHHH-HHC-CSEEEEEESC---HHHHHHHHHHSS----CCEEEE
T ss_pred cCCCEEEEcCCccchH------------HHH----HHHHH-hcC-CCcEEEEECC---hHHHHhHHhhCe----EEEEEE
Confidence 1799999999987642 112 22222 266 8898888743 211 11222222 888888
Q ss_pred eecCCCCCCCCcc
Q 044601 171 VPFCKQDYPGYDN 183 (213)
Q Consensus 171 ~~F~~~~yPgY~~ 183 (213)
.+|| .||.=.|
T Consensus 407 ~~~D--mFP~T~H 417 (425)
T 2jjq_A 407 VALD--MFPHTPH 417 (425)
T ss_dssp EEEC--CSTTSSC
T ss_pred EEEC--cCCCCce
Confidence 9997 5665433
No 214
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=89.90 E-value=0.84 Score=36.36 Aligned_cols=135 Identities=12% Similarity=0.136 Sum_probs=76.4
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHH------------HhCCCEEEEeeec
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVREL------------EERGCLVFYGVDA 80 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L------------~~~g~~V~~gVDA 80 (213)
.+..+||-||=|.=-++..|++. + ..|+|.=+ |++.+.. +..+.... ...++++ ..-|+
T Consensus 21 ~~~~~vLD~GCG~G~~~~~la~~-g--~~V~gvD~-S~~~l~~----a~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~d~ 91 (203)
T 1pjz_A 21 VPGARVLVPLCGKSQDMSWLSGQ-G--YHVVGAEL-SEAAVER----YFTERGEQPHITSQGDFKVYAAPGIEI-WCGDF 91 (203)
T ss_dssp CTTCEEEETTTCCSHHHHHHHHH-C--CEEEEEEE-CHHHHHH----HHHHHCSCSEEEEETTEEEEECSSSEE-EEECC
T ss_pred CCCCEEEEeCCCCcHhHHHHHHC-C--CeEEEEeC-CHHHHHH----HHHHccCCcccccccccccccCCccEE-EECcc
Confidence 46789999999888888889876 3 46665433 3333322 32221100 0123443 34577
Q ss_pred cccCCCccccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCe-EEEEecc------CCCCCc
Q 044601 81 MQMSQHFFLRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGE-IHVTHKE------GDPYNK 153 (213)
Q Consensus 81 t~L~~~~~l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~-ihvTl~~------~~py~~ 153 (213)
.++... ....||.|+.++-..- .+......+++.+..+|+ |+|. +.+++.- +.|+.
T Consensus 92 ~~l~~~---~~~~fD~v~~~~~l~~------------l~~~~~~~~l~~~~r~Lk-pgG~~~l~~~~~~~~~~~~~~~~- 154 (203)
T 1pjz_A 92 FALTAR---DIGHCAAFYDRAAMIA------------LPADMRERYVQHLEALMP-QACSGLLITLEYDQALLEGPPFS- 154 (203)
T ss_dssp SSSTHH---HHHSEEEEEEESCGGG------------SCHHHHHHHHHHHHHHSC-SEEEEEEEEESSCSSSSSSCCCC-
T ss_pred ccCCcc---cCCCEEEEEECcchhh------------CCHHHHHHHHHHHHHHcC-CCcEEEEEEEecCccccCCCCCC-
Confidence 776421 1157999997542211 122334578899999998 9998 5555432 23332
Q ss_pred ccHHhH---HHHhCcEEEEEeecC
Q 044601 154 WELVKK---AEKIGLTLQEVVPFC 174 (213)
Q Consensus 154 W~i~~l---A~~~gl~l~~~~~F~ 174 (213)
+...++ -.. ||.+......+
T Consensus 155 ~~~~el~~~~~~-gf~i~~~~~~~ 177 (203)
T 1pjz_A 155 VPQTWLHRVMSG-NWEVTKVGGQD 177 (203)
T ss_dssp CCHHHHHHTSCS-SEEEEEEEESS
T ss_pred CCHHHHHHHhcC-CcEEEEecccc
Confidence 333333 333 88877665554
No 215
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=89.88 E-value=0.66 Score=38.03 Aligned_cols=109 Identities=16% Similarity=0.050 Sum_probs=68.2
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEE-EEeeeccccCCCccccC
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLV-FYGVDAMQMSQHFFLRT 91 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V-~~gVDAt~L~~~~~l~~ 91 (213)
.++.|||=||=|.=..+..|+++. +..+|+.-.+ .++.++ +.++ .+..+..+ +...||..+... +..
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~--~~~v~~id~~--~~~~~~---a~~~---~~~~~~~~~~~~~~a~~~~~~--~~~ 126 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAP--IDEHWIIECN--DGVFQR---LRDW---APRQTHKVIPLKGLWEDVAPT--LPD 126 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSC--EEEEEEEECC--HHHHHH---HHHH---GGGCSSEEEEEESCHHHHGGG--SCT
T ss_pred cCCCeEEEECCCccHHHHHHHHhC--CcEEEEEeCC--HHHHHH---HHHH---HhhCCCceEEEeehHHhhccc--ccc
Confidence 467899999999888888887654 3466654333 333332 3322 23344433 345677665433 236
Q ss_pred CcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEE
Q 044601 92 HKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHV 143 (213)
Q Consensus 92 ~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihv 143 (213)
..||.|+|+=..... ...+..-...|+..+..+|+ |+|.+..
T Consensus 127 ~~FD~i~~D~~~~~~---------~~~~~~~~~~~~~e~~rvLk-PGG~l~f 168 (236)
T 3orh_A 127 GHFDGILYDTYPLSE---------ETWHTHQFNFIKNHAFRLLK-PGGVLTY 168 (236)
T ss_dssp TCEEEEEECCCCCBG---------GGTTTHHHHHHHHTHHHHEE-EEEEEEE
T ss_pred cCCceEEEeeeeccc---------chhhhcchhhhhhhhhheeC-CCCEEEE
Confidence 789999987322221 12344456788899999998 9998754
No 216
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=89.58 E-value=2.7 Score=36.57 Aligned_cols=106 Identities=12% Similarity=0.066 Sum_probs=66.5
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCC--EE-EEeeeccccCCCccc
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGC--LV-FYGVDAMQMSQHFFL 89 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~--~V-~~gVDAt~L~~~~~l 89 (213)
....+||=||=|.=.++..|++++. .. ..|.+|. .++.+ .+..++ ++.|. +| ...-|+.+... ++
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~--~~~~~D~-~~~~~---~a~~~~---~~~~~~~~v~~~~~d~~~~~~--~~ 245 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNK-EV--EVTIVDL-PQQLE---MMRKQT---AGLSGSERIHGHGANLLDRDV--PF 245 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHST-TC--EEEEEEC-HHHHH---HHHHHH---TTCTTGGGEEEEECCCCSSSC--CC
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCC-CC--EEEEEeC-HHHHH---HHHHHH---HhcCcccceEEEEccccccCC--CC
Confidence 4568999999999999999999873 33 4666676 44443 244443 33342 22 33446554320 11
Q ss_pred cCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEE
Q 044601 90 RTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVT 144 (213)
Q Consensus 90 ~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvT 144 (213)
...||.|+..+-.--. ...-...+++.+...|+ |+|.|.|.
T Consensus 246 -p~~~D~v~~~~vlh~~------------~~~~~~~~l~~~~~~L~-pgG~l~i~ 286 (363)
T 3dp7_A 246 -PTGFDAVWMSQFLDCF------------SEEEVISILTRVAQSIG-KDSKVYIM 286 (363)
T ss_dssp -CCCCSEEEEESCSTTS------------CHHHHHHHHHHHHHHCC-TTCEEEEE
T ss_pred -CCCcCEEEEechhhhC------------CHHHHHHHHHHHHHhcC-CCcEEEEE
Confidence 2579999987643221 11223467888899998 99998875
No 217
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=89.42 E-value=2.3 Score=37.05 Aligned_cols=99 Identities=17% Similarity=0.208 Sum_probs=64.3
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccC
Q 044601 12 YSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRT 91 (213)
Q Consensus 12 y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~ 91 (213)
++...+||=||=|.=.++..|++.+. .+.++.+|- ..+.+.-.. + .+++++ .-|+.+ .. .
T Consensus 207 ~~~~~~vLDvG~G~G~~~~~l~~~~~---~~~~~~~D~-~~~~~~a~~-------~--~~v~~~-~~d~~~---~~--~- 266 (372)
T 1fp1_D 207 FEGISTLVDVGGGSGRNLELIISKYP---LIKGINFDL-PQVIENAPP-------L--SGIEHV-GGDMFA---SV--P- 266 (372)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCT---TCEEEEEEC-HHHHTTCCC-------C--TTEEEE-ECCTTT---CC--C-
T ss_pred cCCCCEEEEeCCCCcHHHHHHHHHCC---CCeEEEeCh-HHHHHhhhh-------c--CCCEEE-eCCccc---CC--C-
Confidence 45678999999999999999999863 346677776 444442111 1 234433 336654 12 1
Q ss_pred CcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEE
Q 044601 92 HKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVT 144 (213)
Q Consensus 92 ~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvT 144 (213)
. ||.|+.++.---. ...-...+++.+..+|+ |+|.+.|.
T Consensus 267 ~-~D~v~~~~~lh~~------------~d~~~~~~l~~~~~~L~-pgG~l~i~ 305 (372)
T 1fp1_D 267 Q-GDAMILKAVCHNW------------SDEKCIEFLSNCHKALS-PNGKVIIV 305 (372)
T ss_dssp C-EEEEEEESSGGGS------------CHHHHHHHHHHHHHHEE-EEEEEEEE
T ss_pred C-CCEEEEecccccC------------CHHHHHHHHHHHHHhcC-CCCEEEEE
Confidence 2 9999997653221 01123477888999998 99998876
No 218
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=89.34 E-value=4.9 Score=32.81 Aligned_cols=125 Identities=15% Similarity=0.170 Sum_probs=77.5
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhC-CCEEEEeeeccccCCCccccC
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEER-GCLVFYGVDAMQMSQHFFLRT 91 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~-g~~V~~gVDAt~L~~~~~l~~ 91 (213)
.+..+||=||=|.=.++..|++ .+..++++-+.. .+.+ ..++. ++. ...-|++.+. +..
T Consensus 33 ~~~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~--~~~~----------~a~~~~~~~-~~~~d~~~~~----~~~ 92 (261)
T 3ege_A 33 PKGSVIADIGAGTGGYSVALAN---QGLFVYAVEPSI--VMRQ----------QAVVHPQVE-WFTGYAENLA----LPD 92 (261)
T ss_dssp CTTCEEEEETCTTSHHHHHHHT---TTCEEEEECSCH--HHHH----------SSCCCTTEE-EECCCTTSCC----SCT
T ss_pred CCCCEEEEEcCcccHHHHHHHh---CCCEEEEEeCCH--HHHH----------HHHhccCCE-EEECchhhCC----CCC
Confidence 5679999999999999999986 245777665542 2222 11111 333 3345666543 345
Q ss_pred CcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccC-CCCCccc---------------
Q 044601 92 HKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEG-DPYNKWE--------------- 155 (213)
Q Consensus 92 ~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~-~py~~W~--------------- 155 (213)
+.||.|+.++.---. ++ ...+++.+..+|+ +|.+.|.-... .....|.
T Consensus 93 ~~fD~v~~~~~l~~~---~~-----------~~~~l~~~~~~Lk--gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (261)
T 3ege_A 93 KSVDGVISILAIHHF---SH-----------LEKSFQEMQRIIR--DGTIVLLTFDIRLAQRIWLYDYFPFLWEDALRFL 156 (261)
T ss_dssp TCBSEEEEESCGGGC---SS-----------HHHHHHHHHHHBC--SSCEEEEEECGGGCCCCGGGGTCHHHHHHHHTSC
T ss_pred CCEeEEEEcchHhhc---cC-----------HHHHHHHHHHHhC--CcEEEEEEcCCchhHHHHHHHHHHHHhhhhhhhC
Confidence 789999998752221 10 2377888999995 89766654432 1112232
Q ss_pred -----HHhHHHHhCcEEEEEeecC
Q 044601 156 -----LVKKAEKIGLTLQEVVPFC 174 (213)
Q Consensus 156 -----i~~lA~~~gl~l~~~~~F~ 174 (213)
+. +.+++||..++..++.
T Consensus 157 ~~~~~~~-~l~~aGF~~v~~~~~~ 179 (261)
T 3ege_A 157 PLDEQIN-LLQENTKRRVEAIPFL 179 (261)
T ss_dssp CHHHHHH-HHHHHHCSEEEEEECC
T ss_pred CCHHHHH-HHHHcCCCceeEEEec
Confidence 44 7788999887776664
No 219
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=88.66 E-value=5.6 Score=34.57 Aligned_cols=134 Identities=14% Similarity=0.003 Sum_probs=78.6
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccC
Q 044601 12 YSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRT 91 (213)
Q Consensus 12 y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~ 91 (213)
++...+||=||=|.=.++.+|++++. ++.+|.+|..+.+.. +..++..-..-+++++ .-|.-+ .. .
T Consensus 177 ~~~~~~v~DvGgG~G~~~~~l~~~~p---~~~~~~~dlp~v~~~----a~~~~~~~~~~rv~~~-~gD~~~---~~---~ 242 (353)
T 4a6d_A 177 LSVFPLMCDLGGGAGALAKECMSLYP---GCKITVFDIPEVVWT----AKQHFSFQEEEQIDFQ-EGDFFK---DP---L 242 (353)
T ss_dssp GGGCSEEEEETCTTSHHHHHHHHHCS---SCEEEEEECHHHHHH----HHHHSCC--CCSEEEE-ESCTTT---SC---C
T ss_pred cccCCeEEeeCCCCCHHHHHHHHhCC---CceeEeccCHHHHHH----HHHhhhhcccCceeee-cCcccc---CC---C
Confidence 45678999999999999999999984 456778887543322 3333321111234333 224322 11 2
Q ss_pred CcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEecc----C-CC----------------
Q 044601 92 HKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKE----G-DP---------------- 150 (213)
Q Consensus 92 ~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~----~-~p---------------- 150 (213)
..+|.|++..=--.. . ..=....++.++..|+ |+|.|.|.-.- + .|
T Consensus 243 ~~~D~~~~~~vlh~~--~----------d~~~~~iL~~~~~al~-pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g 309 (353)
T 4a6d_A 243 PEADLYILARVLHDW--A----------DGKCSHLLERIYHTCK-PGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEG 309 (353)
T ss_dssp CCCSEEEEESSGGGS--C----------HHHHHHHHHHHHHHCC-TTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSC
T ss_pred CCceEEEeeeecccC--C----------HHHHHHHHHHHHhhCC-CCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCC
Confidence 347888875421111 0 1112355678888998 99998886321 1 11
Q ss_pred --CCcccHHhHHHHhCcEEEEEee
Q 044601 151 --YNKWELVKKAEKIGLTLQEVVP 172 (213)
Q Consensus 151 --y~~W~i~~lA~~~gl~l~~~~~ 172 (213)
++.=+...+.+++||...+..+
T Consensus 310 ~ert~~e~~~ll~~AGf~~v~v~~ 333 (353)
T 4a6d_A 310 QERTPTHYHMLLSSAGFRDFQFKK 333 (353)
T ss_dssp CCCCHHHHHHHHHHHTCEEEEEEC
T ss_pred cCCCHHHHHHHHHHCCCceEEEEE
Confidence 1111345688899999988765
No 220
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=88.06 E-value=2.7 Score=35.12 Aligned_cols=138 Identities=13% Similarity=0.079 Sum_probs=74.6
Q ss_pred CCCeEEEEecCChhHHHHHHHHh---CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhC-CCEEE-EeeeccccCCC--
Q 044601 14 SKQRILLVGEGDFSFSLCLAREF---GFAHNMVATCLDTQETIANKYSNAVDNVRELEER-GCLVF-YGVDAMQMSQH-- 86 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~---~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~-g~~V~-~gVDAt~L~~~-- 86 (213)
++.+||=||=|.=.++..|++.+ .+...+..|..|.-+++.+. +.+.+...... ++.+. ...|+..+...
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~---a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 128 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAK---YKELVAKTSNLENVKFAWHKETSSEYQSRML 128 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHH---HHHHHHTCSSCTTEEEEEECSCHHHHHHHHH
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHH---HHHHHHhccCCCcceEEEEecchhhhhhhhc
Confidence 46799999877666655443322 13444545777855555553 33333211111 22332 23344433210
Q ss_pred ccccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCC----------------
Q 044601 87 FFLRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDP---------------- 150 (213)
Q Consensus 87 ~~l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~p---------------- 150 (213)
..+....||.|+.++=.--.. + +..+++.+..+|+ |+|.+.|.......
T Consensus 129 ~~~~~~~fD~V~~~~~l~~~~---d-----------~~~~l~~~~r~Lk-pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~ 193 (292)
T 2aot_A 129 EKKELQKWDFIHMIQMLYYVK---D-----------IPATLKFFHSLLG-TNAKMLIIVVSGSSGWDKLWKKYGSRFPQD 193 (292)
T ss_dssp TTTCCCCEEEEEEESCGGGCS---C-----------HHHHHHHHHHTEE-EEEEEEEEEECTTSHHHHHHHHHGGGSCCC
T ss_pred cccCCCceeEEEEeeeeeecC---C-----------HHHHHHHHHHHcC-CCcEEEEEEecCCccHHHHHHHHHHhccCC
Confidence 012357899999875222110 0 2367888899998 99999887533210
Q ss_pred -----CCcccHHhHHHHhCcEEEE
Q 044601 151 -----YNKWELVKKAEKIGLTLQE 169 (213)
Q Consensus 151 -----y~~W~i~~lA~~~gl~l~~ 169 (213)
++.=.+..+.+++||....
T Consensus 194 ~~~~~~~~~~~~~~l~~aGf~~~~ 217 (292)
T 2aot_A 194 DLCQYITSDDLTQMLDNLGLKYEC 217 (292)
T ss_dssp TTCCCCCHHHHHHHHHHHTCCEEE
T ss_pred CcccCCCHHHHHHHHHHCCCceEE
Confidence 1111345677788998766
No 221
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=86.94 E-value=1.1 Score=40.45 Aligned_cols=106 Identities=14% Similarity=0.120 Sum_probs=66.1
Q ss_pred CCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCC-EEEEeeeccccCC-CccccCC
Q 044601 15 KQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGC-LVFYGVDAMQMSQ-HFFLRTH 92 (213)
Q Consensus 15 ~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~-~V~~gVDAt~L~~-~~~l~~~ 92 (213)
+.+||=++=|.=.||+-+|++.+.+..|+|--.+ ++..+ .+.+|++...-.+- .....-||.++-. .. ..
T Consensus 53 g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~--~~av~---~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~---~~ 124 (392)
T 3axs_A 53 PVKVADPLSASGIRAIRFLLETSCVEKAYANDIS--SKAIE---IMKENFKLNNIPEDRYEIHGMEANFFLRKEW---GF 124 (392)
T ss_dssp CEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSC--HHHHH---HHHHHHHHTTCCGGGEEEECSCHHHHHHSCC---SS
T ss_pred CCEEEECCCcccHHHHHHHHhCCCCCEEEEEECC--HHHHH---HHHHHHHHhCCCCceEEEEeCCHHHHHHHhh---CC
Confidence 5788887777667777777764323456665444 22222 35677765432221 2355568877543 22 35
Q ss_pred cccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEecc
Q 044601 93 KFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKE 147 (213)
Q Consensus 93 ~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~ 147 (213)
.||+|+-| | .|. ...|+..|.++|+ ++|.|++|..+
T Consensus 125 ~fD~V~lD-P-~g~----------------~~~~l~~a~~~Lk-~gGll~~t~t~ 160 (392)
T 3axs_A 125 GFDYVDLD-P-FGT----------------PVPFIESVALSMK-RGGILSLTATD 160 (392)
T ss_dssp CEEEEEEC-C-SSC----------------CHHHHHHHHHHEE-EEEEEEEEECC
T ss_pred CCcEEEEC-C-CcC----------------HHHHHHHHHHHhC-CCCEEEEEecc
Confidence 79999998 5 221 0258889999998 99999998754
No 222
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=86.86 E-value=1.8 Score=38.65 Aligned_cols=104 Identities=17% Similarity=0.055 Sum_probs=67.9
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHH--------------hC-CCEEEEee
Q 044601 14 SKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELE--------------ER-GCLVFYGV 78 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~--------------~~-g~~V~~gV 78 (213)
++.+||=+|=|.=.+++.+|+..+ +..|+|--.+ ++ ..+ -+.+|++.+. .. ++. +..-
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~-~~~V~avDi~-~~-av~---~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~-v~~~ 119 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETP-AEEVWLNDIS-ED-AYE---LMKRNVMLNFDGELRESKGRAILKGEKTIV-INHD 119 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSS-CSEEEEEESC-HH-HHH---HHHHHHHHHCCSCCEECSSEEEEESSSEEE-EEES
T ss_pred CCCEEEECCCchhHHHHHHHHhCC-CCeEEEEECC-HH-HHH---HHHHHHHHhcccccccccccccccCCCceE-EEcC
Confidence 467898888888888888888764 4567666555 22 222 3677887761 11 233 4455
Q ss_pred eccccCCCccccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEec
Q 044601 79 DAMQMSQHFFLRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHK 146 (213)
Q Consensus 79 DAt~L~~~~~l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~ 146 (213)
||.++-... ...||.|+.| | .|.. ..|+.+|..+|+ ++|.|+||..
T Consensus 120 Da~~~~~~~---~~~fD~I~lD-P-~~~~----------------~~~l~~a~~~lk-~gG~l~vt~t 165 (378)
T 2dul_A 120 DANRLMAER---HRYFHFIDLD-P-FGSP----------------MEFLDTALRSAK-RRGILGVTAT 165 (378)
T ss_dssp CHHHHHHHS---TTCEEEEEEC-C-SSCC----------------HHHHHHHHHHEE-EEEEEEEEEC
T ss_pred cHHHHHHhc---cCCCCEEEeC-C-CCCH----------------HHHHHHHHHhcC-CCCEEEEEee
Confidence 776653221 3579999966 5 2320 278889999998 9999999864
No 223
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=86.71 E-value=1.9 Score=31.85 Aligned_cols=73 Identities=16% Similarity=0.186 Sum_probs=46.0
Q ss_pred CCeEEEEecCChhHHHHHHHHhC-CCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCCc
Q 044601 15 KQRILLVGEGDFSFSLCLAREFG-FAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTHK 93 (213)
Q Consensus 15 ~~~ILlVGEGnFSFS~aLa~~~~-~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~~ 93 (213)
.++|+++|=|.+ ..+|++.+. .+..+++...+. +.++.+++.|+.++++ |+++........-..
T Consensus 6 ~~~v~I~G~G~i--G~~la~~L~~~g~~V~~id~~~------------~~~~~~~~~~~~~~~g-d~~~~~~l~~~~~~~ 70 (141)
T 3llv_A 6 RYEYIVIGSEAA--GVGLVRELTAAGKKVLAVDKSK------------EKIELLEDEGFDAVIA-DPTDESFYRSLDLEG 70 (141)
T ss_dssp CCSEEEECCSHH--HHHHHHHHHHTTCCEEEEESCH------------HHHHHHHHTTCEEEEC-CTTCHHHHHHSCCTT
T ss_pred CCEEEEECCCHH--HHHHHHHHHHCCCeEEEEECCH------------HHHHHHHHCCCcEEEC-CCCCHHHHHhCCccc
Confidence 468999999875 445554431 256777765441 2356677778887765 877754322222356
Q ss_pred ccEEEEcCC
Q 044601 94 FDRVIYNFP 102 (213)
Q Consensus 94 FDrIiFNFP 102 (213)
.|.||.--|
T Consensus 71 ~d~vi~~~~ 79 (141)
T 3llv_A 71 VSAVLITGS 79 (141)
T ss_dssp CSEEEECCS
T ss_pred CCEEEEecC
Confidence 899998776
No 224
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=86.62 E-value=5.2 Score=33.88 Aligned_cols=108 Identities=11% Similarity=0.134 Sum_probs=64.6
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCC-cccc
Q 044601 12 YSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQH-FFLR 90 (213)
Q Consensus 12 y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~-~~l~ 90 (213)
-.++.+||=||=|.=.++..|++. +..|+|.-.+ +.+.+ .+.+++.. . ...+|+..+... ....
T Consensus 43 l~~g~~VLDlGcGtG~~a~~La~~---g~~V~gvD~S--~~ml~---~Ar~~~~~---~----~v~~~~~~~~~~~~~~~ 107 (261)
T 3iv6_A 43 IVPGSTVAVIGASTRFLIEKALER---GASVTVFDFS--QRMCD---DLAEALAD---R----CVTIDLLDITAEIPKEL 107 (261)
T ss_dssp CCTTCEEEEECTTCHHHHHHHHHT---TCEEEEEESC--HHHHH---HHHHHTSS---S----CCEEEECCTTSCCCGGG
T ss_pred CCCcCEEEEEeCcchHHHHHHHhc---CCEEEEEECC--HHHHH---HHHHHHHh---c----cceeeeeeccccccccc
Confidence 356789999999988889999875 3477775444 32332 13333221 1 234555554430 0111
Q ss_pred CCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccC
Q 044601 91 THKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEG 148 (213)
Q Consensus 91 ~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~ 148 (213)
...||.|+-|+.---. ...-+...++....+| |+|.+.++.+.+
T Consensus 108 ~~~fD~Vv~~~~l~~~------------~~~~~~~~l~~l~~lL--PGG~l~lS~~~g 151 (261)
T 3iv6_A 108 AGHFDFVLNDRLINRF------------TTEEARRACLGMLSLV--GSGTVRASVKLG 151 (261)
T ss_dssp TTCCSEEEEESCGGGS------------CHHHHHHHHHHHHHHH--TTSEEEEEEEBS
T ss_pred CCCccEEEEhhhhHhC------------CHHHHHHHHHHHHHhC--cCcEEEEEeccC
Confidence 4689999998642111 1122345666667777 899999998765
No 225
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=86.03 E-value=3.7 Score=32.88 Aligned_cols=77 Identities=18% Similarity=0.078 Sum_probs=51.7
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCC---EEEEeeeccccCCCcccc
Q 044601 14 SKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGC---LVFYGVDAMQMSQHFFLR 90 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~---~V~~gVDAt~L~~~~~l~ 90 (213)
++.+||=+|=|.=.++..|++. +..|+|.-++ +++.+ .+..|++. .|+ .-+..-|+.++. .
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~---~~~v~~vD~s--~~~~~---~a~~~~~~---~~~~~~~~~~~~d~~~~~-----~ 141 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALT---GMRVIAIDID--PVKIA---LARNNAEV---YGIADKIEFICGDFLLLA-----S 141 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHT---TCEEEEEESC--HHHHH---HHHHHHHH---TTCGGGEEEEESCHHHHG-----G
T ss_pred CCCEEEECccccCHHHHHHHHc---CCEEEEEECC--HHHHH---HHHHHHHH---cCCCcCeEEEECChHHhc-----c
Confidence 6789999999988888888875 2577766555 22333 24455443 342 234555887764 2
Q ss_pred CCcccEEEEcCCcCCC
Q 044601 91 THKFDRVIYNFPHVGF 106 (213)
Q Consensus 91 ~~~FDrIiFNFPH~G~ 106 (213)
...||.|+.|.|..+.
T Consensus 142 ~~~~D~v~~~~~~~~~ 157 (241)
T 3gdh_A 142 FLKADVVFLSPPWGGP 157 (241)
T ss_dssp GCCCSEEEECCCCSSG
T ss_pred cCCCCEEEECCCcCCc
Confidence 4689999999998764
No 226
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=85.58 E-value=2.8 Score=38.59 Aligned_cols=105 Identities=24% Similarity=0.208 Sum_probs=64.5
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHh-CCCEEEEeeeccccCCCccccC
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEE-RGCLVFYGVDAMQMSQHFFLRT 91 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~-~g~~V~~gVDAt~L~~~~~l~~ 91 (213)
.++.+||=||=|.=.++..|++. + ...|+|.-.. + +.+ .+..+++...- ..+++ ..-|+..+. + .
T Consensus 157 ~~~~~VLDiGcGtG~la~~la~~-~-~~~V~gvD~s--~-~l~---~A~~~~~~~gl~~~v~~-~~~d~~~~~----~-~ 222 (480)
T 3b3j_A 157 FKDKIVLDVGCGSGILSFFAAQA-G-ARKIYAVEAS--T-MAQ---HAEVLVKSNNLTDRIVV-IPGKVEEVS----L-P 222 (480)
T ss_dssp TTTCEEEEESCSTTHHHHHHHHT-T-CSEEEEEECH--H-HHH---HHHHHHHHTTCTTTEEE-EESCTTTCC----C-S
T ss_pred cCCCEEEEecCcccHHHHHHHHc-C-CCEEEEEEcH--H-HHH---HHHHHHHHcCCCCcEEE-EECchhhCc----c-C
Confidence 35689999999987788888874 3 5688887654 2 222 25555554321 12333 345666542 1 2
Q ss_pred CcccEEEEcCC-cCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEe
Q 044601 92 HKFDRVIYNFP-HVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTH 145 (213)
Q Consensus 92 ~~FDrIiFNFP-H~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl 145 (213)
.+||.||-|-| +... +..++ ..+..+..+|+ ++|.+.++.
T Consensus 223 ~~fD~Ivs~~~~~~~~------------~e~~~-~~l~~~~~~Lk-pgG~li~~~ 263 (480)
T 3b3j_A 223 EQVDIIISEPMGYMLF------------NERML-ESYLHAKKYLK-PSGNMFPTI 263 (480)
T ss_dssp SCEEEEECCCCHHHHT------------CHHHH-HHHHHGGGGEE-EEEEEESCE
T ss_pred CCeEEEEEeCchHhcC------------cHHHH-HHHHHHHHhcC-CCCEEEEEe
Confidence 57999999877 2221 11222 34557889998 999876543
No 227
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=84.51 E-value=4.6 Score=33.22 Aligned_cols=146 Identities=13% Similarity=0.096 Sum_probs=80.2
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCH--HHHHhhc---chH--------------------HHHHHHH
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQ--ETIANKY---SNA--------------------VDNVREL 67 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~--~~l~~kY---~~a--------------------~~ni~~L 67 (213)
.++++||=||=|.=-++..++.. + ..+|+|+=+... +.+.++. +.+ ..-.+.+
T Consensus 54 ~~g~~vLDiGCG~G~~~~~~~~~-~-~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~ 131 (263)
T 2a14_A 54 LQGDTLIDIGSGPTIYQVLAACD-S-FQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKL 131 (263)
T ss_dssp CCEEEEEESSCTTCCGGGTTGGG-T-EEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHH
T ss_pred CCCceEEEeCCCccHHHHHHHHh-h-hcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHH
Confidence 45688999999984455544433 2 236877655532 1111110 000 0001112
Q ss_pred HhCCCEEEEeeeccccCCCccccCCcccEEEEcCC--cCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEe
Q 044601 68 EERGCLVFYGVDAMQMSQHFFLRTHKFDRVIYNFP--HVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTH 145 (213)
Q Consensus 68 ~~~g~~V~~gVDAt~L~~~~~l~~~~FDrIiFNFP--H~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl 145 (213)
+. .+.-..-.|+++...-..+...+||.|+-++= |+.. +..=+...++++..+|+ |+|.+.++-
T Consensus 132 ~~-~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~------------~~~~~~~~l~~i~r~LK-PGG~li~~~ 197 (263)
T 2a14_A 132 RA-AVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACC------------SLDAYRAALCNLASLLK-PGGHLVTTV 197 (263)
T ss_dssp HH-HEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCS------------SHHHHHHHHHHHHTTEE-EEEEEEEEE
T ss_pred Hh-hhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcC------------CHHHHHHHHHHHHHHcC-CCcEEEEEE
Confidence 21 23224556777743211122458999999862 2221 11223467888999998 999988874
Q ss_pred ccCC-------------CCCcccHHhHHHHhCcEEEEEeecC
Q 044601 146 KEGD-------------PYNKWELVKKAEKIGLTLQEVVPFC 174 (213)
Q Consensus 146 ~~~~-------------py~~W~i~~lA~~~gl~l~~~~~F~ 174 (213)
.... +++.=.+..+.+.+||.+.+...+.
T Consensus 198 ~~~~~~~~~g~~~~~~~~~~~~~l~~~l~~aGF~i~~~~~~~ 239 (263)
T 2a14_A 198 TLRLPSYMVGKREFSCVALEKGEVEQAVLDAGFDIEQLLHSP 239 (263)
T ss_dssp ESSCCEEEETTEEEECCCCCHHHHHHHHHHTTEEEEEEEEEC
T ss_pred eecCccceeCCeEeeccccCHHHHHHHHHHCCCEEEEEeecc
Confidence 3221 1122246677788999998887664
No 228
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=84.37 E-value=6.9 Score=35.75 Aligned_cols=112 Identities=9% Similarity=-0.026 Sum_probs=62.2
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhh----cchHHHHHHHHH--hCCCEEEEeeeccccCCC
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANK----YSNAVDNVRELE--ERGCLVFYGVDAMQMSQH 86 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~k----Y~~a~~ni~~L~--~~g~~V~~gVDAt~L~~~ 86 (213)
.++++||=||=|.=++++.||+..+ ...+++--.+. ++.+. ...+..|++.+. -..+.++.+ |+......
T Consensus 241 ~~g~~VLDLGCGsG~la~~LA~~~g-~~~V~GVDis~--~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~g-D~~~~~~~ 316 (433)
T 1u2z_A 241 KKGDTFMDLGSGVGNCVVQAALECG-CALSFGCEIMD--DASDLTILQYEELKKRCKLYGMRLNNVEFSLK-KSFVDNNR 316 (433)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHC-CSEEEEEECCH--HHHHHHHHHHHHHHHHHHHTTBCCCCEEEEES-SCSTTCHH
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHCC-CCEEEEEeCCH--HHHHHHHHhHHHHHHHHHHcCCCCCceEEEEc-Cccccccc
Confidence 4678999999998899999998875 34566655553 22221 111233443322 112344433 22211000
Q ss_pred ccccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEE
Q 044601 87 FFLRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVT 144 (213)
Q Consensus 87 ~~l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvT 144 (213)
+......||+|+.|.+..+. . +...++.+..+|+ ++|.|.+.
T Consensus 317 ~~~~~~~FDvIvvn~~l~~~--------d-------~~~~L~el~r~LK-pGG~lVi~ 358 (433)
T 1u2z_A 317 VAELIPQCDVILVNNFLFDE--------D-------LNKKVEKILQTAK-VGCKIISL 358 (433)
T ss_dssp HHHHGGGCSEEEECCTTCCH--------H-------HHHHHHHHHTTCC-TTCEEEES
T ss_pred cccccCCCCEEEEeCccccc--------c-------HHHHHHHHHHhCC-CCeEEEEe
Confidence 10013579999998544221 0 1134566778998 99998876
No 229
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=84.10 E-value=2.3 Score=37.36 Aligned_cols=133 Identities=17% Similarity=0.197 Sum_probs=76.7
Q ss_pred CCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCcc------
Q 044601 15 KQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFF------ 88 (213)
Q Consensus 15 ~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~------ 88 (213)
+.+||=+|=|.=.||++||+. ...|+|.-.+ ++..+ .+..|++...-.++. ...-||.++.....
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~---~~~V~gvd~~--~~ai~---~a~~n~~~ng~~~v~-~~~~d~~~~~~~~~~~~~~~ 284 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARN---FDRVLATEIA--KPSVA---AAQYNIAANHIDNVQ-IIRMAAEEFTQAMNGVREFN 284 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGG---SSEEEEECCC--HHHHH---HHHHHHHHTTCCSEE-EECCCSHHHHHHHSSCCCCT
T ss_pred CCEEEEccCCCCHHHHHHHhc---CCEEEEEECC--HHHHH---HHHHHHHHcCCCceE-EEECCHHHHHHHHhhccccc
Confidence 467888777766677778764 3467765544 33333 356666432111233 44557766532111
Q ss_pred ------ccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCCCC-cccHHhHHH
Q 044601 89 ------LRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDPYN-KWELVKKAE 161 (213)
Q Consensus 89 ------l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py~-~W~i~~lA~ 161 (213)
+....||.||.|=|-.|.. ..+..+|+ +.|.|....|+ |.. .-++..+.
T Consensus 285 ~l~~~~~~~~~fD~Vv~dPPr~g~~--------------------~~~~~~l~-~~g~ivyvsc~--p~t~ard~~~l~- 340 (369)
T 3bt7_A 285 RLQGIDLKSYQCETIFVDPPRSGLD--------------------SETEKMVQ-AYPRILYISCN--PETLCKNLETLS- 340 (369)
T ss_dssp TGGGSCGGGCCEEEEEECCCTTCCC--------------------HHHHHHHT-TSSEEEEEESC--HHHHHHHHHHHH-
T ss_pred cccccccccCCCCEEEECcCccccH--------------------HHHHHHHh-CCCEEEEEECC--HHHHHHHHHHHh-
Confidence 0113799999999987631 12344555 78887766664 221 12344454
Q ss_pred HhCcEEEEEeecCCCCCCCCcc
Q 044601 162 KIGLTLQEVVPFCKQDYPGYDN 183 (213)
Q Consensus 162 ~~gl~l~~~~~F~~~~yPgY~~ 183 (213)
.||.+.+..+|| .||.=.|
T Consensus 341 -~~y~~~~~~~~D--~FP~T~H 359 (369)
T 3bt7_A 341 -QTHKVERLALFD--QFPYTHH 359 (369)
T ss_dssp -HHEEEEEEEEEC--CSTTSSC
T ss_pred -hCcEEEEEEeec--cCCCCCc
Confidence 269999999997 4775444
No 230
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=83.85 E-value=6.1 Score=34.05 Aligned_cols=98 Identities=15% Similarity=0.236 Sum_probs=62.9
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCC
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTH 92 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~ 92 (213)
+...+||=||=|.=.++..|++++. . +..|.+|- ..+.+.=.. + .+++++ .-|+.+ .. .
T Consensus 192 ~~~~~vlDvG~G~G~~~~~l~~~~p-~--~~~~~~D~-~~~~~~a~~-------~--~~v~~~-~~d~~~---~~--~-- 250 (358)
T 1zg3_A 192 EGLESLVDVGGGTGGVTKLIHEIFP-H--LKCTVFDQ-PQVVGNLTG-------N--ENLNFV-GGDMFK---SI--P-- 250 (358)
T ss_dssp HTCSEEEEETCTTSHHHHHHHHHCT-T--SEEEEEEC-HHHHSSCCC-------C--SSEEEE-ECCTTT---CC--C--
T ss_pred cCCCEEEEECCCcCHHHHHHHHHCC-C--CeEEEecc-HHHHhhccc-------C--CCcEEE-eCccCC---CC--C--
Confidence 4678999999999999999999873 3 34566676 344432111 1 234443 335544 11 1
Q ss_pred cccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccC---CCeEEEE
Q 044601 93 KFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEE---NGEIHVT 144 (213)
Q Consensus 93 ~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~---~G~ihvT 144 (213)
.||.|+.++..--.. ..-...+++.+..+|+ | +|.+.|.
T Consensus 251 ~~D~v~~~~vlh~~~------------d~~~~~~l~~~~~~L~-p~~~gG~l~i~ 292 (358)
T 1zg3_A 251 SADAVLLKWVLHDWN------------DEQSLKILKNSKEAIS-HKGKDGKVIII 292 (358)
T ss_dssp CCSEEEEESCGGGSC------------HHHHHHHHHHHHHHTG-GGGGGCEEEEE
T ss_pred CceEEEEcccccCCC------------HHHHHHHHHHHHHhCC-CCCCCcEEEEE
Confidence 399999987633221 1123467888899998 8 9998875
No 231
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=83.53 E-value=11 Score=31.11 Aligned_cols=147 Identities=13% Similarity=0.115 Sum_probs=80.2
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHH---hhcc---------hHHHHHHHHHhCC----------
Q 044601 14 SKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIA---NKYS---------NAVDNVRELEERG---------- 71 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~---~kY~---------~a~~ni~~L~~~g---------- 71 (213)
+..+||=||=|.=.++..+++.. +..|+++-+. ++.+. ++.. ....++..++...
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~~--~~~v~gvD~s-~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 147 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACSH--FEDITMTDFL-EVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQL 147 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGGG--CSEEEEECSC-HHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhccC--CCeEEEeCCC-HHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHH
Confidence 56899999877644443333332 4577776653 33332 1111 1113344433211
Q ss_pred ---CEEEEeeeccc-cCCC-ccccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEec
Q 044601 72 ---CLVFYGVDAMQ-MSQH-FFLRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHK 146 (213)
Q Consensus 72 ---~~V~~gVDAt~-L~~~-~~l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~ 146 (213)
+.-+...|+++ +.-. ..+....||.|+.++-.-- +.....=+..+++.+..+|+ |+|.+.++-.
T Consensus 148 ~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~----------~~~~~~~~~~~l~~~~r~Lk-pGG~l~~~~~ 216 (289)
T 2g72_A 148 RARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEA----------VSPDLASFQRALDHITTLLR-PGGHLLLIGA 216 (289)
T ss_dssp HHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHH----------HCSSHHHHHHHHHHHHTTEE-EEEEEEEEEE
T ss_pred HhhhceEEecccCCCCCccccccCCCCCCEEEehhhhhh----------hcCCHHHHHHHHHHHHHhcC-CCCEEEEEEe
Confidence 12234457776 3210 1123467999999863111 00011224578899999998 9999888621
Q ss_pred cC-------------CCCCcccHHhHHHHhCcEEEEEeecC
Q 044601 147 EG-------------DPYNKWELVKKAEKIGLTLQEVVPFC 174 (213)
Q Consensus 147 ~~-------------~py~~W~i~~lA~~~gl~l~~~~~F~ 174 (213)
.. .+++.=.+..+.+++||.++....+.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~~ 257 (289)
T 2g72_A 217 LEESWYLAGEARLTVVPVSEEEVREALVRSGYKVRDLRTYI 257 (289)
T ss_dssp ESCCEEEETTEEEECCCCCHHHHHHHHHHTTEEEEEEEEEE
T ss_pred cCcceEEcCCeeeeeccCCHHHHHHHHHHcCCeEEEeeEee
Confidence 11 11233345677888999998877664
No 232
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=81.82 E-value=22 Score=29.86 Aligned_cols=125 Identities=14% Similarity=0.144 Sum_probs=78.5
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCC-CEEEEeeeccccCCCccccCC
Q 044601 14 SKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERG-CLVFYGVDAMQMSQHFFLRTH 92 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g-~~V~~gVDAt~L~~~~~l~~~ 92 (213)
++.+||=||=|.=-.+.+|++. ++...++|+-.+. ..+. .|..|++...-.+ +.|. --|+-..- . ...
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~-~~~~~V~avDi~~-~al~----~A~~N~~~~gl~~~I~v~-~gD~l~~~--~--~~~ 89 (244)
T 3gnl_A 21 KNERIADIGSDHAYLPCFAVKN-QTASFAIAGEVVD-GPFQ----SAQKQVRSSGLTEQIDVR-KGNGLAVI--E--KKD 89 (244)
T ss_dssp SSEEEEEETCSTTHHHHHHHHT-TSEEEEEEEESSH-HHHH----HHHHHHHHTTCTTTEEEE-ECSGGGGC--C--GGG
T ss_pred CCCEEEEECCccHHHHHHHHHh-CCCCEEEEEECCH-HHHH----HHHHHHHHcCCCceEEEE-ecchhhcc--C--ccc
Confidence 4689999999988888888876 3355788877663 2222 3666765432212 2332 23433321 1 123
Q ss_pred cccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCCCCcccHHhHHHHhCcEEEEE
Q 044601 93 KFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDPYNKWELVKKAEKIGLTLQEV 170 (213)
Q Consensus 93 ~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py~~W~i~~lA~~~gl~l~~~ 170 (213)
.||.||. .|- + -.++..++..+...|+ +.|.+.+.-..+ .-.+.....+.||.+.+.
T Consensus 90 ~~D~Ivi----agm-G-----------g~lI~~IL~~~~~~L~-~~~~lIlq~~~~----~~~lr~~L~~~Gf~i~~E 146 (244)
T 3gnl_A 90 AIDTIVI----AGM-G-----------GTLIRTILEEGAAKLA-GVTKLILQPNIA----AWQLREWSEQNNWLITSE 146 (244)
T ss_dssp CCCEEEE----EEE-C-----------HHHHHHHHHHTGGGGT-TCCEEEEEESSC----HHHHHHHHHHHTEEEEEE
T ss_pred cccEEEE----eCC-c-----------hHHHHHHHHHHHHHhC-CCCEEEEEcCCC----hHHHHHHHHHCCCEEEEE
Confidence 5999886 332 1 2788899999999997 888887776543 334556667778887554
No 233
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=81.78 E-value=1.5 Score=37.92 Aligned_cols=112 Identities=11% Similarity=0.015 Sum_probs=66.9
Q ss_pred CCCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEecc---CCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCc
Q 044601 11 HYSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCL---DTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHF 87 (213)
Q Consensus 11 ~y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~---ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~ 87 (213)
...++++||=||=|-=.||..|++. + .|+|.=. .+...+ . .-. ++.+...++.++-++|++.+.
T Consensus 79 ~~~~g~~VLDlGcG~G~~s~~la~~-~---~V~gvD~~~~~~~~~~-~-~~~----~~~~~~~~v~~~~~~D~~~l~--- 145 (305)
T 2p41_A 79 LVTPEGKVVDLGCGRGGWSYYCGGL-K---NVREVKGLTKGGPGHE-E-PIP----MSTYGWNLVRLQSGVDVFFIP--- 145 (305)
T ss_dssp SSCCCEEEEEETCTTSHHHHHHHTS-T---TEEEEEEECCCSTTSC-C-CCC----CCSTTGGGEEEECSCCTTTSC---
T ss_pred CCCCCCEEEEEcCCCCHHHHHHHhc-C---CEEEEeccccCchhHH-H-HHH----hhhcCCCCeEEEeccccccCC---
Confidence 3566789999987777778888876 2 5666322 111111 0 000 011111256777777888763
Q ss_pred cccCCcccEEEEcCCcC-CCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccC
Q 044601 88 FLRTHKFDRVIYNFPHV-GFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEG 148 (213)
Q Consensus 88 ~l~~~~FDrIiFNFPH~-G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~ 148 (213)
..+||.|+-|.+.. |.. ...+...+ ..+..+..+|+ |+|.+.+.+..+
T Consensus 146 ---~~~fD~V~sd~~~~~g~~--------~~d~~~~l-~~L~~~~~~Lk-pGG~~v~kv~~~ 194 (305)
T 2p41_A 146 ---PERCDTLLCDIGESSPNP--------TVEAGRTL-RVLNLVENWLS-NNTQFCVKVLNP 194 (305)
T ss_dssp ---CCCCSEEEECCCCCCSSH--------HHHHHHHH-HHHHHHHHHCC-TTCEEEEEESCC
T ss_pred ---cCCCCEEEECCccccCcc--------hhhHHHHH-HHHHHHHHHhC-CCCEEEEEeCCC
Confidence 35799999998643 321 11222223 47788889998 999888866554
No 234
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=80.41 E-value=5.7 Score=34.54 Aligned_cols=96 Identities=15% Similarity=0.120 Sum_probs=58.4
Q ss_pred CCCeEEEEe-cCChh-HHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCC-Ccccc
Q 044601 14 SKQRILLVG-EGDFS-FSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQ-HFFLR 90 (213)
Q Consensus 14 ~~~~ILlVG-EGnFS-FS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~-~~~l~ 90 (213)
++++||++| -|..- ++..||++++ +..|+||+-.. +.++.++++|+...++-.. .+.+ ...+.
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~-g~~Vi~~~~~~------------~~~~~~~~lGad~vi~~~~-~~~~~v~~~~ 236 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRT-DLTVIATASRP------------ETQEWVKSLGAHHVIDHSK-PLAAEVAALG 236 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHC-CSEEEEECSSH------------HHHHHHHHTTCSEEECTTS-CHHHHHHTTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhc-CCEEEEEeCCH------------HHHHHHHHcCCCEEEeCCC-CHHHHHHHhc
Confidence 678999999 78764 4455577654 56899997652 2356677889865543321 1111 11123
Q ss_pred CCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEE
Q 044601 91 THKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVT 144 (213)
Q Consensus 91 ~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvT 144 (213)
...+|.|+= .+|.. .-+..+..+|+ ++|+|.+.
T Consensus 237 ~~g~Dvvid---~~g~~-----------------~~~~~~~~~l~-~~G~iv~~ 269 (363)
T 4dvj_A 237 LGAPAFVFS---TTHTD-----------------KHAAEIADLIA-PQGRFCLI 269 (363)
T ss_dssp SCCEEEEEE---CSCHH-----------------HHHHHHHHHSC-TTCEEEEC
T ss_pred CCCceEEEE---CCCch-----------------hhHHHHHHHhc-CCCEEEEE
Confidence 457886654 24421 24566778897 99997654
No 235
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=80.33 E-value=13 Score=31.69 Aligned_cols=91 Identities=18% Similarity=0.264 Sum_probs=56.8
Q ss_pred CCCCCCeEEEEecCChh-HHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccc
Q 044601 11 HYSSKQRILLVGEGDFS-FSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFL 89 (213)
Q Consensus 11 ~y~~~~~ILlVGEGnFS-FS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l 89 (213)
.-.++++||++|=|..- ++..||++.| .+|+||+...+ .++.++++|+...+ -|...+.+
T Consensus 173 ~~~~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~------------~~~~~~~lGa~~v~-~~~~~~~~---- 233 (348)
T 3two_A 173 KVTKGTKVGVAGFGGLGSMAVKYAVAMG--AEVSVFARNEH------------KKQDALSMGVKHFY-TDPKQCKE---- 233 (348)
T ss_dssp TCCTTCEEEEESCSHHHHHHHHHHHHTT--CEEEEECSSST------------THHHHHHTTCSEEE-SSGGGCCS----
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCC--CeEEEEeCCHH------------HHHHHHhcCCCeec-CCHHHHhc----
Confidence 34678999999988653 4455577765 48999875532 24456778886555 33333221
Q ss_pred cCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEE
Q 044601 90 RTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVT 144 (213)
Q Consensus 90 ~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvT 144 (213)
.+|.|+=. +|.. ..+..+..+|+ ++|++.+.
T Consensus 234 ---~~D~vid~---~g~~-----------------~~~~~~~~~l~-~~G~iv~~ 264 (348)
T 3two_A 234 ---ELDFIIST---IPTH-----------------YDLKDYLKLLT-YNGDLALV 264 (348)
T ss_dssp ---CEEEEEEC---CCSC-----------------CCHHHHHTTEE-EEEEEEEC
T ss_pred ---CCCEEEEC---CCcH-----------------HHHHHHHHHHh-cCCEEEEE
Confidence 68877642 3321 12455677887 88887654
No 236
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=80.23 E-value=24 Score=29.20 Aligned_cols=124 Identities=13% Similarity=0.077 Sum_probs=78.6
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCC-CEEEEeeeccccCCCccccCC
Q 044601 14 SKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERG-CLVFYGVDAMQMSQHFFLRTH 92 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g-~~V~~gVDAt~L~~~~~l~~~ 92 (213)
++.+||=||=|.=..+.+||+.. +...++|+-.+. ..+ + .|..|++...-.+ +.++ --|+-. .+...
T Consensus 15 ~g~~VlDIGtGsG~l~i~la~~~-~~~~V~avDi~~-~al-~---~A~~N~~~~gl~~~i~~~-~~d~l~-----~l~~~ 82 (225)
T 3kr9_A 15 QGAILLDVGSDHAYLPIELVERG-QIKSAIAGEVVE-GPY-Q---SAVKNVEAHGLKEKIQVR-LANGLA-----AFEET 82 (225)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTT-SEEEEEEEESSH-HHH-H---HHHHHHHHTTCTTTEEEE-ECSGGG-----GCCGG
T ss_pred CCCEEEEeCCCcHHHHHHHHHhC-CCCEEEEEECCH-HHH-H---HHHHHHHHcCCCceEEEE-ECchhh-----hcccC
Confidence 46799999999999999999863 455777776663 222 2 3666765443222 3333 224321 11222
Q ss_pred -cccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCCCCcccHHhHHHHhCcEEEEE
Q 044601 93 -KFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDPYNKWELVKKAEKIGLTLQEV 170 (213)
Q Consensus 93 -~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py~~W~i~~lA~~~gl~l~~~ 170 (213)
.||.|+.. |- + -.++..++..+...|+ ++|.+.+.-.++ .-.+.....+.||.+.+.
T Consensus 83 ~~~D~Ivia----G~-G-----------g~~i~~Il~~~~~~L~-~~~~lVlq~~~~----~~~vr~~L~~~Gf~i~~e 140 (225)
T 3kr9_A 83 DQVSVITIA----GM-G-----------GRLIARILEEGLGKLA-NVERLILQPNNR----EDDLRIWLQDHGFQIVAE 140 (225)
T ss_dssp GCCCEEEEE----EE-C-----------HHHHHHHHHHTGGGCT-TCCEEEEEESSC----HHHHHHHHHHTTEEEEEE
T ss_pred cCCCEEEEc----CC-C-----------hHHHHHHHHHHHHHhC-CCCEEEEECCCC----HHHHHHHHHHCCCEEEEE
Confidence 69999862 21 1 2678899999999998 888887766532 334555667788877664
No 237
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=80.02 E-value=25 Score=29.26 Aligned_cols=131 Identities=15% Similarity=0.148 Sum_probs=81.7
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCC-CEEEEeeeccccCCCccccCC
Q 044601 14 SKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERG-CLVFYGVDAMQMSQHFFLRTH 92 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g-~~V~~gVDAt~L~~~~~l~~~ 92 (213)
++.+||=||=|.=-.+.+|++. +....++|+-.+. ..+ + .|..|++...-.+ +.++.+ |+-..-. ...
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~-~~~~~V~AvDi~~-~al-~---~A~~N~~~~gl~~~I~~~~g-D~l~~~~----~~~ 89 (230)
T 3lec_A 21 KGARLLDVGSDHAYLPIFLLQM-GYCDFAIAGEVVN-GPY-Q---SALKNVSEHGLTSKIDVRLA-NGLSAFE----EAD 89 (230)
T ss_dssp TTEEEEEETCSTTHHHHHHHHT-TCEEEEEEEESSH-HHH-H---HHHHHHHHTTCTTTEEEEEC-SGGGGCC----GGG
T ss_pred CCCEEEEECCchHHHHHHHHHh-CCCCEEEEEECCH-HHH-H---HHHHHHHHcCCCCcEEEEEC-chhhccc----ccc
Confidence 4689999999988888888876 3455788877763 222 2 3667776543222 444433 4433211 123
Q ss_pred cccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCCCCcccHHhHHHHhCcEEEEE-e
Q 044601 93 KFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDPYNKWELVKKAEKIGLTLQEV-V 171 (213)
Q Consensus 93 ~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py~~W~i~~lA~~~gl~l~~~-~ 171 (213)
.||.|+. .|- + -.++..++..+...|+ +.|.+.+.-..+ .-.+.....+.||.+.+. .
T Consensus 90 ~~D~Ivi----aGm-G-----------g~lI~~IL~~~~~~l~-~~~~lIlqp~~~----~~~lr~~L~~~Gf~i~~E~l 148 (230)
T 3lec_A 90 NIDTITI----CGM-G-----------GRLIADILNNDIDKLQ-HVKTLVLQPNNR----EDDLRKWLAANDFEIVAEDI 148 (230)
T ss_dssp CCCEEEE----EEE-C-----------HHHHHHHHHHTGGGGT-TCCEEEEEESSC----HHHHHHHHHHTTEEEEEEEE
T ss_pred ccCEEEE----eCC-c-----------hHHHHHHHHHHHHHhC-cCCEEEEECCCC----hHHHHHHHHHCCCEEEEEEE
Confidence 6999885 232 1 2678889999999997 888777665432 345566777788887664 3
Q ss_pred ecCCC
Q 044601 172 PFCKQ 176 (213)
Q Consensus 172 ~F~~~ 176 (213)
-++..
T Consensus 149 v~e~~ 153 (230)
T 3lec_A 149 LTEND 153 (230)
T ss_dssp EEC--
T ss_pred EEECC
Confidence 44433
No 238
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=79.87 E-value=4.6 Score=34.46 Aligned_cols=99 Identities=14% Similarity=0.142 Sum_probs=59.1
Q ss_pred CCCCCCeEEEEecCChhH-HHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccc
Q 044601 11 HYSSKQRILLVGEGDFSF-SLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFL 89 (213)
Q Consensus 11 ~y~~~~~ILlVGEGnFSF-S~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l 89 (213)
.-.++++||+.|=|..-- +..||++.| .+|+||+... ++++.++++|+...++-+...+.+...-
T Consensus 163 ~~~~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~------------~~~~~~~~lGa~~~i~~~~~~~~~~~~~ 228 (340)
T 3s2e_A 163 DTRPGQWVVISGIGGLGHVAVQYARAMG--LRVAAVDIDD------------AKLNLARRLGAEVAVNARDTDPAAWLQK 228 (340)
T ss_dssp TCCTTSEEEEECCSTTHHHHHHHHHHTT--CEEEEEESCH------------HHHHHHHHTTCSEEEETTTSCHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCC--CeEEEEeCCH------------HHHHHHHHcCCCEEEeCCCcCHHHHHHH
Confidence 346789999999887643 444577765 4899986542 2356677889865543322222111100
Q ss_pred cCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEE
Q 044601 90 RTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVT 144 (213)
Q Consensus 90 ~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvT 144 (213)
....+|.||.+- |.. .-+..+..+|+ ++|+|.+.
T Consensus 229 ~~g~~d~vid~~---g~~-----------------~~~~~~~~~l~-~~G~iv~~ 262 (340)
T 3s2e_A 229 EIGGAHGVLVTA---VSP-----------------KAFSQAIGMVR-RGGTIALN 262 (340)
T ss_dssp HHSSEEEEEESS---CCH-----------------HHHHHHHHHEE-EEEEEEEC
T ss_pred hCCCCCEEEEeC---CCH-----------------HHHHHHHHHhc-cCCEEEEe
Confidence 123689887653 321 23566777887 88886543
No 239
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=79.72 E-value=11 Score=32.25 Aligned_cols=151 Identities=12% Similarity=0.107 Sum_probs=76.5
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCC----CCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccc
Q 044601 14 SKQRILLVGEGDFSFSLCLAREFGF----AHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFL 89 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~~~----~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l 89 (213)
+..+||=+|=|.=.|+.++++.... ..+|++.-.+.. ..+ -+..|+... ...+.+.. -|+... .
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~--~~~---~a~~n~~~~-g~~~~i~~-~D~l~~-----~ 197 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDL--LIS---LALVGADLQ-RQKMTLLH-QDGLAN-----L 197 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHH--HHH---HHHHHHHHH-TCCCEEEE-SCTTSC-----C
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHH--HHH---HHHHHHHhC-CCCceEEE-CCCCCc-----c
Confidence 4567776655555666667666532 156666666532 222 244555432 22344433 344331 1
Q ss_pred cCCcccEEEEcCCcCCCcccccchHHHH-----hhHHHHHHHHHHHHhhcccCCCeEEEEeccCCCCC---cccHHhHHH
Q 044601 90 RTHKFDRVIYNFPHVGFIFRENSYCQIQ-----LNKELVKGFLRNAKLLLKEENGEIHVTHKEGDPYN---KWELVKKAE 161 (213)
Q Consensus 90 ~~~~FDrIiFNFPH~G~~~~e~~~~~i~-----~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py~---~W~i~~lA~ 161 (213)
...+||.||-|-|. |....++...... -...+-..|+..+..+|+ ++|.+.+.+..+ .+. .-.+...-.
T Consensus 198 ~~~~fD~Ii~NPPf-g~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk-~gG~~~~v~p~~-~~~~~~~~~ir~~l~ 274 (344)
T 2f8l_A 198 LVDPVDVVISDLPV-GYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTK-PGGYLFFLVPDA-MFGTSDFAKVDKFIK 274 (344)
T ss_dssp CCCCEEEEEEECCC-SEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEE-EEEEEEEEEEGG-GGGSTTHHHHHHHHH
T ss_pred ccCCccEEEECCCC-CCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhC-CCCEEEEEECch-hcCCchHHHHHHHHH
Confidence 24679999999993 2111110000000 001123468899999998 999988887544 111 123333334
Q ss_pred HhCcEEEEEeecCCCCCCC
Q 044601 162 KIGLTLQEVVPFCKQDYPG 180 (213)
Q Consensus 162 ~~gl~l~~~~~F~~~~yPg 180 (213)
+.++ +...+.+....|++
T Consensus 275 ~~~~-~~~ii~lp~~~F~~ 292 (344)
T 2f8l_A 275 KNGH-IEGIIKLPETLFKS 292 (344)
T ss_dssp HHEE-EEEEEECCGGGSCC
T ss_pred hCCe-EEEeeeCChhhccC
Confidence 4453 33445555555554
No 240
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=78.62 E-value=6.7 Score=30.18 Aligned_cols=74 Identities=16% Similarity=0.185 Sum_probs=44.0
Q ss_pred CCeEEEEecCChhHHHHH-HHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccc-cCC
Q 044601 15 KQRILLVGEGDFSFSLCL-AREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFL-RTH 92 (213)
Q Consensus 15 ~~~ILlVGEGnFSFS~aL-a~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l-~~~ 92 (213)
+++|+++|=|.+.-.++- +...+ +..+++...+. +.++.+++.|+.++++ |+++...-... .-.
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~-g~~V~vid~~~------------~~~~~~~~~g~~~~~g-d~~~~~~l~~~~~~~ 104 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARY-GKISLGIEIRE------------EAAQQHRSEGRNVISG-DATDPDFWERILDTG 104 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHH-CSCEEEEESCH------------HHHHHHHHTTCCEEEC-CTTCHHHHHTBCSCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcc-CCeEEEEECCH------------HHHHHHHHCCCCEEEc-CCCCHHHHHhccCCC
Confidence 568999999987665553 22320 35676664442 2245567789887765 66653211111 234
Q ss_pred cccEEEEcCC
Q 044601 93 KFDRVIYNFP 102 (213)
Q Consensus 93 ~FDrIiFNFP 102 (213)
..|.||---|
T Consensus 105 ~ad~vi~~~~ 114 (183)
T 3c85_A 105 HVKLVLLAMP 114 (183)
T ss_dssp CCCEEEECCS
T ss_pred CCCEEEEeCC
Confidence 5899998655
No 241
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=78.29 E-value=8.5 Score=32.73 Aligned_cols=78 Identities=19% Similarity=0.184 Sum_probs=47.9
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCC
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTH 92 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~ 92 (213)
.++++||=||=|.=.++..|++. +..|+|.-.|. .+.+ .+..|++...-.+++++ .-|+.++. ..
T Consensus 41 ~~~~~VLDiG~G~G~lt~~La~~---~~~v~~vDi~~--~~~~---~a~~~~~~~~~~~v~~~-~~D~~~~~------~~ 105 (299)
T 2h1r_A 41 KSSDIVLEIGCGTGNLTVKLLPL---AKKVITIDIDS--RMIS---EVKKRCLYEGYNNLEVY-EGDAIKTV------FP 105 (299)
T ss_dssp CTTCEEEEECCTTSTTHHHHTTT---SSEEEEECSCH--HHHH---HHHHHHHHTTCCCEEC-----CCSSC------CC
T ss_pred CCcCEEEEEcCcCcHHHHHHHhc---CCEEEEEECCH--HHHH---HHHHHHHHcCCCceEEE-ECchhhCC------cc
Confidence 56789999998888888888865 35787776663 2222 24444432211234443 44776653 13
Q ss_pred cccEEEEcCCcCC
Q 044601 93 KFDRVIYNFPHVG 105 (213)
Q Consensus 93 ~FDrIiFNFPH~G 105 (213)
.||.|+-|.|...
T Consensus 106 ~~D~Vv~n~py~~ 118 (299)
T 2h1r_A 106 KFDVCTANIPYKI 118 (299)
T ss_dssp CCSEEEEECCGGG
T ss_pred cCCEEEEcCCccc
Confidence 6999999999765
No 242
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=76.88 E-value=36 Score=29.42 Aligned_cols=128 Identities=17% Similarity=0.195 Sum_probs=77.7
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccC
Q 044601 12 YSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRT 91 (213)
Q Consensus 12 y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~ 91 (213)
++...+||=||=|.=.++..|++++. ... .|.+|- .++.+.-.. ..++++ ..-|+.+ ..+ .
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~--~~~~D~-~~~~~~a~~---------~~~v~~-~~~d~~~---~~p--~ 261 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKYP-SIN--AINFDL-PHVIQDAPA---------FSGVEH-LGGDMFD---GVP--K 261 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCT-TCE--EEEEEC-HHHHTTCCC---------CTTEEE-EECCTTT---CCC--C
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhCC-CCE--EEEEeh-HHHHHhhhh---------cCCCEE-EecCCCC---CCC--C
Confidence 55679999999999999999999874 334 466675 444433211 123333 3345543 121 2
Q ss_pred CcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEecc--CCC-------------------
Q 044601 92 HKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKE--GDP------------------- 150 (213)
Q Consensus 92 ~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~--~~p------------------- 150 (213)
. |.|+..+-.-.. ...-...+++.+..+|+ |+|.+.|.-.. ..+
T Consensus 262 ~--D~v~~~~vlh~~------------~~~~~~~~l~~~~~~L~-pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~ 326 (368)
T 3reo_A 262 G--DAIFIKWICHDW------------SDEHCLKLLKNCYAALP-DHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAY 326 (368)
T ss_dssp C--SEEEEESCGGGB------------CHHHHHHHHHHHHHHSC-TTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHH
T ss_pred C--CEEEEechhhcC------------CHHHHHHHHHHHHHHcC-CCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhh
Confidence 2 999887653322 11223467888999998 99998875321 111
Q ss_pred ------CCcccHHhHHHHhCcEEEEEeec
Q 044601 151 ------YNKWELVKKAEKIGLTLQEVVPF 173 (213)
Q Consensus 151 ------y~~W~i~~lA~~~gl~l~~~~~F 173 (213)
++.=++..+.+++||...+..+-
T Consensus 327 ~~~g~~rt~~e~~~ll~~AGF~~v~~~~~ 355 (368)
T 3reo_A 327 NPGGKERTEKEFQALAMASGFRGFKVASC 355 (368)
T ss_dssp SSBCCCCCHHHHHHHHHHTTCCEEEEEEE
T ss_pred cCCCccCCHHHHHHHHHHCCCeeeEEEEe
Confidence 11112456778889888887654
No 243
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=76.69 E-value=27 Score=29.41 Aligned_cols=102 Identities=13% Similarity=0.128 Sum_probs=61.7
Q ss_pred CCEEEEeeeccccCCCccccCCcccEEEEcCCcCCCccc---ccchHHHHhhHH---HHHHHHHHHHhhcccCCCeEEEE
Q 044601 71 GCLVFYGVDAMQMSQHFFLRTHKFDRVIYNFPHVGFIFR---ENSYCQIQLNKE---LVKGFLRNAKLLLKEENGEIHVT 144 (213)
Q Consensus 71 g~~V~~gVDAt~L~~~~~l~~~~FDrIiFNFPH~G~~~~---e~~~~~i~~n~~---Ll~~Ff~Sa~~~L~~~~G~ihvT 144 (213)
|-..++.-|+...-.. +..++||.||.|=|-...... .++...+..+.. .+...+..|..+|+ ++|.+.|.
T Consensus 20 ~~~~i~~gD~~~~l~~--l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk-~~G~l~i~ 96 (297)
T 2zig_A 20 GVHRLHVGDAREVLAS--FPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLV-PGGRLVIV 96 (297)
T ss_dssp -CEEEEESCHHHHHTT--SCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEE-EEEEEEEE
T ss_pred cCCEEEECcHHHHHhh--CCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcC-CCcEEEEE
Confidence 3344666788773322 235789999999998643211 111122222322 25678889999998 99999988
Q ss_pred eccCC----CCCcc-------cHHhHHHHhCcEEEEEeecCC
Q 044601 145 HKEGD----PYNKW-------ELVKKAEKIGLTLQEVVPFCK 175 (213)
Q Consensus 145 l~~~~----py~~W-------~i~~lA~~~gl~l~~~~~F~~ 175 (213)
+-+.+ .+..+ .+..+..+.|+.+...+....
T Consensus 97 ~~d~~~~~~~~g~~~~~~~~~~l~~~~~~~Gf~~~~~iiW~K 138 (297)
T 2zig_A 97 VGDVAVARRRFGRHLVFPLHADIQVRCRKLGFDNLNPIIWHK 138 (297)
T ss_dssp ECCEEEECC----EEEECHHHHHHHHHHHTTCEEEEEEEEEC
T ss_pred ECCCccccccCCcccccccHHHHHHHHHHcCCeeeccEEEeC
Confidence 75431 11111 466677889999888766553
No 244
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=76.58 E-value=35 Score=29.07 Aligned_cols=100 Identities=14% Similarity=0.244 Sum_probs=62.9
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccC
Q 044601 12 YSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRT 91 (213)
Q Consensus 12 y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~ 91 (213)
++...+||=||=|.=.++..|++++. ... .|.+|- ..+.+.-.. ..++++. .-|+.+ .. .
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~--~~~~D~-~~~~~~a~~---------~~~v~~~-~~d~~~---~~--p- 245 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETFP-KLK--CIVFDR-PQVVENLSG---------SNNLTYV-GGDMFT---SI--P- 245 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHCT-TCE--EEEEEC-HHHHTTCCC---------BTTEEEE-ECCTTT---CC--C-
T ss_pred cccCceEEEeCCCccHHHHHHHHHCC-CCe--EEEeeC-HHHHhhccc---------CCCcEEE-eccccC---CC--C-
Confidence 45678999999999999999999874 344 456665 444443111 1233333 345543 11 1
Q ss_pred CcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccC---CCeEEEEe
Q 044601 92 HKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEE---NGEIHVTH 145 (213)
Q Consensus 92 ~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~---~G~ihvTl 145 (213)
.||.|+.++..--.. ..-...+++.+..+|+ | +|.+.|.-
T Consensus 246 -~~D~v~~~~~lh~~~------------d~~~~~~l~~~~~~L~-p~~~gG~l~i~e 288 (352)
T 1fp2_A 246 -NADAVLLKYILHNWT------------DKDCLRILKKCKEAVT-NDGKRGKVTIID 288 (352)
T ss_dssp -CCSEEEEESCGGGSC------------HHHHHHHHHHHHHHHS-GGGCCCEEEEEE
T ss_pred -CccEEEeehhhccCC------------HHHHHHHHHHHHHhCC-CCCCCcEEEEEE
Confidence 299999876532221 1123467888899998 8 99988763
No 245
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=75.63 E-value=9.2 Score=28.33 Aligned_cols=74 Identities=23% Similarity=0.202 Sum_probs=46.8
Q ss_pred CCeEEEEecCChhHHHHH-HHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCCc
Q 044601 15 KQRILLVGEGDFSFSLCL-AREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTHK 93 (213)
Q Consensus 15 ~~~ILlVGEGnFSFS~aL-a~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~~ 93 (213)
.++|+++|=|.+..+++- ++.. +..+++...|. +.++.+++.|+.++++ |+++...-....-..
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~--g~~v~vid~~~------------~~~~~~~~~g~~~i~g-d~~~~~~l~~a~i~~ 71 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLAS--DIPLVVIETSR------------TRVDELRERGVRAVLG-NAANEEIMQLAHLEC 71 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHT--TCCEEEEESCH------------HHHHHHHHTTCEEEES-CTTSHHHHHHTTGGG
T ss_pred CCCEEEECcCHHHHHHHHHHHHC--CCCEEEEECCH------------HHHHHHHHcCCCEEEC-CCCCHHHHHhcCccc
Confidence 578999999987666554 2232 46677666552 2355677789988765 776643222122356
Q ss_pred ccEEEEcCCc
Q 044601 94 FDRVIYNFPH 103 (213)
Q Consensus 94 FDrIiFNFPH 103 (213)
.|.||.-.|.
T Consensus 72 ad~vi~~~~~ 81 (140)
T 3fwz_A 72 AKWLILTIPN 81 (140)
T ss_dssp CSEEEECCSC
T ss_pred CCEEEEECCC
Confidence 8999887664
No 246
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=74.32 E-value=5.1 Score=33.80 Aligned_cols=65 Identities=17% Similarity=0.269 Sum_probs=41.9
Q ss_pred CCCCCCeEEEEecCCh-hHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccc
Q 044601 11 HYSSKQRILLVGEGDF-SFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFL 89 (213)
Q Consensus 11 ~y~~~~~ILlVGEGnF-SFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l 89 (213)
...++++||+.|=|.. .++..||++.| .+|+||+ ..+ +++.++++|+...++ |+.++
T Consensus 139 ~~~~g~~VlV~GaG~vG~~a~qlak~~G--a~Vi~~~-~~~------------~~~~~~~lGa~~v~~-d~~~v------ 196 (315)
T 3goh_A 139 PLTKQREVLIVGFGAVNNLLTQMLNNAG--YVVDLVS-ASL------------SQALAAKRGVRHLYR-EPSQV------ 196 (315)
T ss_dssp CCCSCCEEEEECCSHHHHHHHHHHHHHT--CEEEEEC-SSC------------CHHHHHHHTEEEEES-SGGGC------
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEE-Chh------------hHHHHHHcCCCEEEc-CHHHh------
Confidence 4567899999999876 45566688876 4899998 321 134456678765553 32222
Q ss_pred cCCcccEEE
Q 044601 90 RTHKFDRVI 98 (213)
Q Consensus 90 ~~~~FDrIi 98 (213)
...+|.|+
T Consensus 197 -~~g~Dvv~ 204 (315)
T 3goh_A 197 -TQKYFAIF 204 (315)
T ss_dssp -CSCEEEEE
T ss_pred -CCCccEEE
Confidence 45677654
No 247
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=74.16 E-value=12 Score=33.34 Aligned_cols=109 Identities=20% Similarity=0.238 Sum_probs=64.5
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCC-CEEEEeeeccccCCCccccCC
Q 044601 14 SKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERG-CLVFYGVDAMQMSQHFFLRTH 92 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g-~~V~~gVDAt~L~~~~~l~~~ 92 (213)
++++||=||-|-=-.|+-.|+ .| +..|+|--... +.+ .|..+++.-.-.+ ++|+. -|++.+. . ..
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~-aG-A~~V~ave~s~---~~~---~a~~~~~~n~~~~~i~~i~-~~~~~~~--l---pe 148 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQ-AG-ARRVYAVEASA---IWQ---QAREVVRFNGLEDRVHVLP-GPVETVE--L---PE 148 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHH-TT-CSEEEEEECST---THH---HHHHHHHHTTCTTTEEEEE-SCTTTCC--C---SS
T ss_pred CCCEEEEeCCCccHHHHHHHH-hC-CCEEEEEeChH---HHH---HHHHHHHHcCCCceEEEEe-eeeeeec--C---Cc
Confidence 478999999997555544444 34 66888876432 222 2444443221112 44444 4666653 1 36
Q ss_pred cccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCe-------EEEEeccC
Q 044601 93 KFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGE-------IHVTHKEG 148 (213)
Q Consensus 93 ~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~-------ihvTl~~~ 148 (213)
+||.||-+--..+. .+..+|..++.....+|+ |+|. +++.....
T Consensus 149 ~~DvivsE~~~~~l-----------~~e~~l~~~l~a~~r~Lk-p~G~~iP~~atly~apie~ 199 (376)
T 4hc4_A 149 QVDAIVSEWMGYGL-----------LHESMLSSVLHARTKWLK-EGGLLLPASAELFIVPISD 199 (376)
T ss_dssp CEEEEECCCCBTTB-----------TTTCSHHHHHHHHHHHEE-EEEEEESCEEEEEEEEECC
T ss_pred cccEEEeecccccc-----------cccchhhhHHHHHHhhCC-CCceECCccceEEEEEecc
Confidence 79999976443332 333466777777788998 8775 56666554
No 248
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=72.96 E-value=16 Score=30.52 Aligned_cols=131 Identities=13% Similarity=0.058 Sum_probs=60.8
Q ss_pred CcccccccccCCC-------CCCeEEEEecC---Chh--HHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHH-H
Q 044601 1 METETEKWSNHYS-------SKQRILLVGEG---DFS--FSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRE-L 67 (213)
Q Consensus 1 ~~~~~~k~~~~y~-------~~~~ILlVGEG---nFS--FS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~-L 67 (213)
||+-|++.-+|-+ +++++|+.|=+ ..- .+..|+++ +.+|+++..+... .+.++. +
T Consensus 9 ~~~~~~~~~gp~sm~~~~~l~~k~vlVTGasg~~GIG~~ia~~la~~---G~~V~~~~r~~~~---------~~~~~~~~ 76 (296)
T 3k31_A 9 MGTLEAQTQGPGSMRTGMLMEGKKGVIIGVANDKSLAWGIAKAVCAQ---GAEVALTYLSETF---------KKRVDPLA 76 (296)
T ss_dssp ------------CCCCCCTTTTCEEEEECCCSTTSHHHHHHHHHHHT---TCEEEEEESSGGG---------HHHHHHHH
T ss_pred cccceecccCCccccchhccCCCEEEEEeCCCCCCHHHHHHHHHHHC---CCEEEEEeCChHH---------HHHHHHHH
Confidence 4555666655543 36789999965 333 34444433 5688888776321 111222 2
Q ss_pred HhCCCEEEEeeeccccCCCcccc------CCcccEEEEcCCcCCC----c-----ccccchHHHHhhHHHHHHHHHHHHh
Q 044601 68 EERGCLVFYGVDAMQMSQHFFLR------THKFDRVIYNFPHVGF----I-----FRENSYCQIQLNKELVKGFLRNAKL 132 (213)
Q Consensus 68 ~~~g~~V~~gVDAt~L~~~~~l~------~~~FDrIiFNFPH~G~----~-----~~e~~~~~i~~n~~Ll~~Ff~Sa~~ 132 (213)
++.|..+.+.+|.++......+- ..+.|.+|.|==-... . ..++-.+.+..|-.-.....+.+..
T Consensus 77 ~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 156 (296)
T 3k31_A 77 ESLGVKLTVPCDVSDAESVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEP 156 (296)
T ss_dssp HHHTCCEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred HhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344567788998876543221 2478988877422210 0 0011123333343333344455556
Q ss_pred hcccCCCeEEEE
Q 044601 133 LLKEENGEIHVT 144 (213)
Q Consensus 133 ~L~~~~G~ihvT 144 (213)
.+. .+|.|...
T Consensus 157 ~m~-~~g~IV~i 167 (296)
T 3k31_A 157 LMT-NGGSILTL 167 (296)
T ss_dssp GCT-TCEEEEEE
T ss_pred Hhh-cCCEEEEE
Confidence 665 57776544
No 249
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=71.34 E-value=22 Score=30.47 Aligned_cols=76 Identities=20% Similarity=0.254 Sum_probs=51.6
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCC
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTH 92 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~ 92 (213)
.++++||=||=|.=.++..|++. +..|+|.-.|.. +.+ .+.+++. ...+++++ .-|+.++. +...
T Consensus 49 ~~~~~VLEIG~G~G~lT~~La~~---~~~V~aVEid~~--li~---~a~~~~~--~~~~v~vi-~gD~l~~~----~~~~ 113 (295)
T 3gru_A 49 TKDDVVLEIGLGKGILTEELAKN---AKKVYVIEIDKS--LEP---YANKLKE--LYNNIEII-WGDALKVD----LNKL 113 (295)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCGG--GHH---HHHHHHH--HCSSEEEE-ESCTTTSC----GGGS
T ss_pred CCcCEEEEECCCchHHHHHHHhc---CCEEEEEECCHH--HHH---HHHHHhc--cCCCeEEE-ECchhhCC----cccC
Confidence 46789999999999999999987 468988888743 111 2333443 12245554 44887764 2235
Q ss_pred cccEEEEcCCc
Q 044601 93 KFDRVIYNFPH 103 (213)
Q Consensus 93 ~FDrIiFNFPH 103 (213)
.||+||-|.|-
T Consensus 114 ~fD~Iv~NlPy 124 (295)
T 3gru_A 114 DFNKVVANLPY 124 (295)
T ss_dssp CCSEEEEECCG
T ss_pred CccEEEEeCcc
Confidence 69999999995
No 250
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=71.01 E-value=18 Score=31.10 Aligned_cols=100 Identities=16% Similarity=0.228 Sum_probs=57.4
Q ss_pred CCCCCCeEEEEecCChh-HHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeee---ccccCCC
Q 044601 11 HYSSKQRILLVGEGDFS-FSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVD---AMQMSQH 86 (213)
Q Consensus 11 ~y~~~~~ILlVGEGnFS-FS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVD---At~L~~~ 86 (213)
...++++||++|=|..- ++..||+++| ...|++|.... +.++.++++|+...++.+ ...+.+.
T Consensus 168 ~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~------------~~~~~a~~lGa~~vi~~~~~~~~~~~~~ 234 (356)
T 1pl8_A 168 GVTLGHKVLVCGAGPIGMVTLLVAKAMG-AAQVVVTDLSA------------TRLSKAKEIGADLVLQISKESPQEIARK 234 (356)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCH------------HHHHHHHHTTCSEEEECSSCCHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCH------------HHHHHHHHhCCCEEEcCcccccchHHHH
Confidence 45678999999977543 4555677775 33888886542 234566778886444332 1111111
Q ss_pred -ccccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEE
Q 044601 87 -FFLRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVT 144 (213)
Q Consensus 87 -~~l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvT 144 (213)
..+....+|.||=. +|.. ..+..+..+|+ ++|++.+.
T Consensus 235 i~~~~~~g~D~vid~---~g~~-----------------~~~~~~~~~l~-~~G~iv~~ 272 (356)
T 1pl8_A 235 VEGQLGCKPEVTIEC---TGAE-----------------ASIQAGIYATR-SGGTLVLV 272 (356)
T ss_dssp HHHHHTSCCSEEEEC---SCCH-----------------HHHHHHHHHSC-TTCEEEEC
T ss_pred HHHHhCCCCCEEEEC---CCCh-----------------HHHHHHHHHhc-CCCEEEEE
Confidence 01112468887643 3321 13456678887 89987543
No 251
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=70.00 E-value=8.2 Score=34.77 Aligned_cols=75 Identities=27% Similarity=0.307 Sum_probs=45.7
Q ss_pred CCCeEEEEecCChhHHHHHHHHhC-CCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCC
Q 044601 14 SKQRILLVGEGDFSFSLCLAREFG-FAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTH 92 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~~-~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~ 92 (213)
..++|+++|=|.|.-.++ +.+. .+..+++--.|. +.++.+++.|+.|++| |||+..--....-.
T Consensus 3 ~~~~viIiG~Gr~G~~va--~~L~~~g~~vvvId~d~------------~~v~~~~~~g~~vi~G-Dat~~~~L~~agi~ 67 (413)
T 3l9w_A 3 HGMRVIIAGFGRFGQITG--RLLLSSGVKMVVLDHDP------------DHIETLRKFGMKVFYG-DATRMDLLESAGAA 67 (413)
T ss_dssp -CCSEEEECCSHHHHHHH--HHHHHTTCCEEEEECCH------------HHHHHHHHTTCCCEES-CTTCHHHHHHTTTT
T ss_pred CCCeEEEECCCHHHHHHH--HHHHHCCCCEEEEECCH------------HHHHHHHhCCCeEEEc-CCCCHHHHHhcCCC
Confidence 457899999998766555 3321 246677665552 2356667778888777 88876532222234
Q ss_pred cccEEEEcCCc
Q 044601 93 KFDRVIYNFPH 103 (213)
Q Consensus 93 ~FDrIiFNFPH 103 (213)
..|.||--.|.
T Consensus 68 ~A~~viv~~~~ 78 (413)
T 3l9w_A 68 KAEVLINAIDD 78 (413)
T ss_dssp TCSEEEECCSS
T ss_pred ccCEEEECCCC
Confidence 56777765553
No 252
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=69.88 E-value=31 Score=28.82 Aligned_cols=138 Identities=14% Similarity=0.140 Sum_probs=73.6
Q ss_pred CCCeEEEEecCC-hhHHHHHHHH--h---CCC-----CeEEEeccCC--HHHHH---hhcchHHHHHHHHHhC-------
Q 044601 14 SKQRILLVGEGD-FSFSLCLARE--F---GFA-----HNMVATCLDT--QETIA---NKYSNAVDNVRELEER------- 70 (213)
Q Consensus 14 ~~~~ILlVGEGn-FSFS~aLa~~--~---~~~-----~~l~ATs~ds--~~~l~---~kY~~a~~ni~~L~~~------- 70 (213)
+..+||=+|=|- ++|...+... + .+. .++|+.-.+. .++|. +.||......++|-+.
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 457888888886 8887765421 1 332 3556555442 34443 4466644334444221
Q ss_pred --------C-CEE-EEeeecccc-CCCccccCCcccEEEEcCCcCCCcccccchHHHHhhHHH-HHHHHHHHHhhcccCC
Q 044601 71 --------G-CLV-FYGVDAMQM-SQHFFLRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKEL-VKGFLRNAKLLLKEEN 138 (213)
Q Consensus 71 --------g-~~V-~~gVDAt~L-~~~~~l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~L-l~~Ff~Sa~~~L~~~~ 138 (213)
| ++| ++--||.++ .+........||.|+.+ |.... .|.+| -..||.....+|+ ++
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD-~fsp~-----------~~p~lw~~~~l~~l~~~L~-pG 206 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLD-GFAPA-----------KNPDMWTQNLFNAMARLAR-PG 206 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEEC-SSCTT-----------TCGGGCCHHHHHHHHHHEE-EE
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEEC-CCCcc-----------cChhhcCHHHHHHHHHHcC-CC
Confidence 1 222 445577663 22211011379999997 11111 22233 2368888999998 88
Q ss_pred CeEEEEeccCCCCCcccHHhHHHHhCcEEEEE
Q 044601 139 GEIHVTHKEGDPYNKWELVKKAEKIGLTLQEV 170 (213)
Q Consensus 139 G~ihvTl~~~~py~~W~i~~lA~~~gl~l~~~ 170 (213)
|.+. |-... . .+...-..+||.+.+.
T Consensus 207 G~l~-tysaa----~-~vrr~L~~aGF~v~~~ 232 (257)
T 2qy6_A 207 GTLA-TFTSA----G-FVRRGLQEAGFTMQKR 232 (257)
T ss_dssp EEEE-ESCCB----H-HHHHHHHHHTEEEEEE
T ss_pred cEEE-EEeCC----H-HHHHHHHHCCCEEEeC
Confidence 8765 43211 1 2444555689998765
No 253
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=68.75 E-value=19 Score=30.69 Aligned_cols=99 Identities=16% Similarity=0.165 Sum_probs=57.0
Q ss_pred CCCCCCeEEEEecCChh-HHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeec-cccCCC-c
Q 044601 11 HYSSKQRILLVGEGDFS-FSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDA-MQMSQH-F 87 (213)
Q Consensus 11 ~y~~~~~ILlVGEGnFS-FS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDA-t~L~~~-~ 87 (213)
.-.++++||++|=|..- ++..||+++| ..|++|.... +.++.++++|+...++.+- ..+.+. .
T Consensus 165 ~~~~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~------------~~~~~~~~lGa~~~~~~~~~~~~~~~i~ 230 (352)
T 1e3j_A 165 GVQLGTTVLVIGAGPIGLVSVLAAKAYG--AFVVCTARSP------------RRLEVAKNCGADVTLVVDPAKEEESSII 230 (352)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCH------------HHHHHHHHTTCSEEEECCTTTSCHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEcCCH------------HHHHHHHHhCCCEEEcCcccccHHHHHH
Confidence 34578999999977543 4455677765 4588886432 2345667788865544331 111111 0
Q ss_pred cc-c---CCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEE
Q 044601 88 FL-R---THKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVT 144 (213)
Q Consensus 88 ~l-~---~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvT 144 (213)
.. . ...+|.||-+ +|.. .-+..+..+|+ ++|++.+.
T Consensus 231 ~~~~~~~g~g~D~vid~---~g~~-----------------~~~~~~~~~l~-~~G~iv~~ 270 (352)
T 1e3j_A 231 ERIRSAIGDLPNVTIDC---SGNE-----------------KCITIGINITR-TGGTLMLV 270 (352)
T ss_dssp HHHHHHSSSCCSEEEEC---SCCH-----------------HHHHHHHHHSC-TTCEEEEC
T ss_pred HHhccccCCCCCEEEEC---CCCH-----------------HHHHHHHHHHh-cCCEEEEE
Confidence 01 1 3568988643 3321 13456678887 89987543
No 254
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=67.98 E-value=15 Score=31.85 Aligned_cols=100 Identities=20% Similarity=0.220 Sum_probs=58.4
Q ss_pred CCCCCCeEEEEecCChh-HHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCC-cc
Q 044601 11 HYSSKQRILLVGEGDFS-FSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQH-FF 88 (213)
Q Consensus 11 ~y~~~~~ILlVGEGnFS-FS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~-~~ 88 (213)
...++++||++|-|... ++..||++.| ...|++|.-.. +.++.++++|+...++.+..++.+. ..
T Consensus 179 ~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~------------~~~~~a~~lGa~~vi~~~~~~~~~~i~~ 245 (370)
T 4ej6_A 179 GIKAGSTVAILGGGVIGLLTVQLARLAG-ATTVILSTRQA------------TKRRLAEEVGATATVDPSAGDVVEAIAG 245 (370)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCH------------HHHHHHHHHTCSEEECTTSSCHHHHHHS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCH------------HHHHHHHHcCCCEEECCCCcCHHHHHHh
Confidence 34678999999988654 3445577775 44788875442 2345566778865543322222111 00
Q ss_pred ---ccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEE
Q 044601 89 ---LRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVT 144 (213)
Q Consensus 89 ---l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvT 144 (213)
+....+|.|+=. +|.. ..+..+..+|+ ++|+|.+.
T Consensus 246 ~~~~~~gg~Dvvid~---~G~~-----------------~~~~~~~~~l~-~~G~vv~~ 283 (370)
T 4ej6_A 246 PVGLVPGGVDVVIEC---AGVA-----------------ETVKQSTRLAK-AGGTVVIL 283 (370)
T ss_dssp TTSSSTTCEEEEEEC---SCCH-----------------HHHHHHHHHEE-EEEEEEEC
T ss_pred hhhccCCCCCEEEEC---CCCH-----------------HHHHHHHHHhc-cCCEEEEE
Confidence 223478877642 4421 34566778897 88987553
No 255
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=67.72 E-value=13 Score=29.82 Aligned_cols=76 Identities=16% Similarity=0.182 Sum_probs=36.1
Q ss_pred cCCCCCCeEEEEecCChhHHHHHHHHhCC-CCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCcc
Q 044601 10 NHYSSKQRILLVGEGDFSFSLCLAREFGF-AHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFF 88 (213)
Q Consensus 10 ~~y~~~~~ILlVGEGnFSFS~aLa~~~~~-~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~ 88 (213)
.++...++|+++|-|. +...|++.+.. +. +++. |...+ .++.++ .|+.++++ |+++...-..
T Consensus 4 ~~~~~~~~viI~G~G~--~G~~la~~L~~~g~-v~vi--d~~~~----------~~~~~~-~~~~~i~g-d~~~~~~l~~ 66 (234)
T 2aef_A 4 IDVAKSRHVVICGWSE--STLECLRELRGSEV-FVLA--EDENV----------RKKVLR-SGANFVHG-DPTRVSDLEK 66 (234)
T ss_dssp ------CEEEEESCCH--HHHHHHHHSTTSEE-EEEE--SCGGG----------HHHHHH-TTCEEEES-CTTCHHHHHH
T ss_pred CCCCCCCEEEEECCCh--HHHHHHHHHHhCCe-EEEE--ECCHH----------HHHHHh-cCCeEEEc-CCCCHHHHHh
Confidence 3455678999999984 55777777642 23 4444 43211 123344 56666554 6664331111
Q ss_pred ccCCcccEEEEcCC
Q 044601 89 LRTHKFDRVIYNFP 102 (213)
Q Consensus 89 l~~~~FDrIiFNFP 102 (213)
..-...|.||.-.|
T Consensus 67 a~i~~ad~vi~~~~ 80 (234)
T 2aef_A 67 ANVRGARAVIVDLE 80 (234)
T ss_dssp TTCTTCSEEEECCS
T ss_pred cCcchhcEEEEcCC
Confidence 11234566665444
No 256
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=67.68 E-value=9.1 Score=30.64 Aligned_cols=121 Identities=17% Similarity=0.166 Sum_probs=60.8
Q ss_pred CCCeEEEEecCChhHHHHHHHHhC--CCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCE-EEEeeeccccCCCcccc
Q 044601 14 SKQRILLVGEGDFSFSLCLAREFG--FAHNMVATCLDTQETIANKYSNAVDNVRELEERGCL-VFYGVDAMQMSQHFFLR 90 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~~--~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~-V~~gVDAt~L~~~~~l~ 90 (213)
++++||+.|=..+ .-.+|++.+. .+.+|++++.+.. . ....++.|++.|.. ..+.+|.++......+-
T Consensus 3 ~~k~vlITGasgg-IG~~~a~~L~~~~g~~V~~~~r~~~-~-------~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~ 73 (276)
T 1wma_A 3 GIHVALVTGGNKG-IGLAIVRDLCRLFSGDVVLTARDVT-R-------GQAAVQQLQAEGLSPRFHQLDIDDLQSIRALR 73 (276)
T ss_dssp CCCEEEESSCSSH-HHHHHHHHHHHHSSSEEEEEESSHH-H-------HHHHHHHHHHTTCCCEEEECCTTCHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHhcCCeEEEEeCChH-H-------HHHHHHHHHhcCCeeEEEECCCCCHHHHHHHH
Confidence 4678999985543 3344444331 2568998887632 1 23345566665543 35678888765432111
Q ss_pred ------CCcccEEEEcCCcCCCccc-----ccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEE
Q 044601 91 ------THKFDRVIYNFPHVGFIFR-----ENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVT 144 (213)
Q Consensus 91 ------~~~FDrIiFNFPH~G~~~~-----e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvT 144 (213)
....|.||.|==....... ++-.+.+..|-.-.....+.+.+.+. +.|.|..+
T Consensus 74 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~g~iv~~ 137 (276)
T 1wma_A 74 DFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIK-PQGRVVNV 137 (276)
T ss_dssp HHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEE-EEEEEEEE
T ss_pred HHHHHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhC-CCCEEEEE
Confidence 1368988866311111100 11122333343333344455556665 45675544
No 257
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=67.48 E-value=18 Score=29.04 Aligned_cols=81 Identities=20% Similarity=0.249 Sum_probs=46.5
Q ss_pred ccCCCCCCeEEEEecC---Chh--HHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHH-hCCCEEEEeeeccc
Q 044601 9 SNHYSSKQRILLVGEG---DFS--FSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELE-ERGCLVFYGVDAMQ 82 (213)
Q Consensus 9 ~~~y~~~~~ILlVGEG---nFS--FS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~-~~g~~V~~gVDAt~ 82 (213)
.....++++||+.|=+ ..- .+..|+++ +.+|+++..... ..+.++++. +.|....+.+|.++
T Consensus 8 ~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~---G~~V~~~~r~~~---------~~~~~~~~~~~~~~~~~~~~Dv~~ 75 (271)
T 3ek2_A 8 HMGFLDGKRILLTGLLSNRSIAYGIAKACKRE---GAELAFTYVGDR---------FKDRITEFAAEFGSELVFPCDVAD 75 (271)
T ss_dssp -CCTTTTCEEEECCCCSTTSHHHHHHHHHHHT---TCEEEEEESSGG---------GHHHHHHHHHHTTCCCEEECCTTC
T ss_pred CccccCCCEEEEeCCCCCCcHHHHHHHHHHHc---CCCEEEEecchh---------hHHHHHHHHHHcCCcEEEECCCCC
Confidence 3445668999999953 333 33344433 568888877632 122234442 33444567889988
Q ss_pred cCCCccc------cCCcccEEEEcC
Q 044601 83 MSQHFFL------RTHKFDRVIYNF 101 (213)
Q Consensus 83 L~~~~~l------~~~~FDrIiFNF 101 (213)
......+ ...+.|.+|.|=
T Consensus 76 ~~~v~~~~~~~~~~~g~id~lv~nA 100 (271)
T 3ek2_A 76 DAQIDALFASLKTHWDSLDGLVHSI 100 (271)
T ss_dssp HHHHHHHHHHHHHHCSCEEEEEECC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECC
Confidence 7644321 124689888774
No 258
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=66.12 E-value=64 Score=27.79 Aligned_cols=128 Identities=14% Similarity=0.161 Sum_probs=76.9
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccC
Q 044601 12 YSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRT 91 (213)
Q Consensus 12 y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~ 91 (213)
++...+||=||=|.=.++..|++++. .. ..|.+|- .++.+.-.. ..++++ ..-|+.+ ..+ .
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~~~~p-~~--~~~~~D~-~~~~~~a~~---------~~~v~~-~~~D~~~---~~p--~ 259 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIAAHYP-TI--KGVNFDL-PHVISEAPQ---------FPGVTH-VGGDMFK---EVP--S 259 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCT-TC--EEEEEEC-HHHHTTCCC---------CTTEEE-EECCTTT---CCC--C
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHHCC-CC--eEEEecC-HHHHHhhhh---------cCCeEE-EeCCcCC---CCC--C
Confidence 56789999999999999999999874 33 4566776 444432111 013332 3345543 111 2
Q ss_pred CcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEecc--CCC-------------------
Q 044601 92 HKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKE--GDP------------------- 150 (213)
Q Consensus 92 ~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~--~~p------------------- 150 (213)
. |.|+..+-.-.. ...-...+++.+...|+ |+|.+.|.=.. ..+
T Consensus 260 ~--D~v~~~~vlh~~------------~d~~~~~~L~~~~~~L~-pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~ 324 (364)
T 3p9c_A 260 G--DTILMKWILHDW------------SDQHCATLLKNCYDALP-AHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAH 324 (364)
T ss_dssp C--SEEEEESCGGGS------------CHHHHHHHHHHHHHHSC-TTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHH
T ss_pred C--CEEEehHHhccC------------CHHHHHHHHHHHHHHcC-CCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhc
Confidence 2 998876532211 11223467888999998 99998875211 111
Q ss_pred ------CCcccHHhHHHHhCcEEEEEeec
Q 044601 151 ------YNKWELVKKAEKIGLTLQEVVPF 173 (213)
Q Consensus 151 ------y~~W~i~~lA~~~gl~l~~~~~F 173 (213)
++.=++..+.+++||..++..+.
T Consensus 325 ~~~g~~rt~~e~~~ll~~AGF~~v~~~~~ 353 (364)
T 3p9c_A 325 NPGGRERYEREFQALARGAGFTGVKSTYI 353 (364)
T ss_dssp CSSCCCCBHHHHHHHHHHTTCCEEEEEEE
T ss_pred ccCCccCCHHHHHHHHHHCCCceEEEEEc
Confidence 11112456778889888887665
No 259
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=66.05 E-value=24 Score=29.75 Aligned_cols=121 Identities=14% Similarity=0.115 Sum_probs=67.1
Q ss_pred CCCCCCeEEEEe-cCChhHHHH-HHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCc-
Q 044601 11 HYSSKQRILLVG-EGDFSFSLC-LAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHF- 87 (213)
Q Consensus 11 ~y~~~~~ILlVG-EGnFSFS~a-La~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~- 87 (213)
...++++||+.| -|..--+.+ ++++.| .+|++|+... +.++.++++|+...++.+...+.+..
T Consensus 137 ~~~~g~~VlV~Ga~g~iG~~~~~~a~~~G--a~Vi~~~~~~------------~~~~~~~~~Ga~~~~~~~~~~~~~~~~ 202 (325)
T 3jyn_A 137 QVKPGEIILFHAAAGGVGSLACQWAKALG--AKLIGTVSSP------------EKAAHAKALGAWETIDYSHEDVAKRVL 202 (325)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHHT--CEEEEEESSH------------HHHHHHHHHTCSEEEETTTSCHHHHHH
T ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHCC--CEEEEEeCCH------------HHHHHHHHcCCCEEEeCCCccHHHHHH
Confidence 456789999999 787765444 466665 4899987542 12445566787655433322221110
Q ss_pred c-ccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCCCCcccHHhHHHHhCcE
Q 044601 88 F-LRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDPYNKWELVKKAEKIGLT 166 (213)
Q Consensus 88 ~-l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py~~W~i~~lA~~~gl~ 166 (213)
. .....+|.||-+ +|.. .+..+..+|+ ++|+|.+.=..+.+...++...+..+..+.
T Consensus 203 ~~~~~~g~Dvvid~---~g~~------------------~~~~~~~~l~-~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~ 260 (325)
T 3jyn_A 203 ELTDGKKCPVVYDG---VGQD------------------TWLTSLDSVA-PRGLVVSFGNASGPVSGVNLGILAQKDSVY 260 (325)
T ss_dssp HHTTTCCEEEEEES---SCGG------------------GHHHHHTTEE-EEEEEEECCCTTCCCCSCCTHHHHHTTSCE
T ss_pred HHhCCCCceEEEEC---CChH------------------HHHHHHHHhc-CCCEEEEEecCCCCCCCCCHHHHhhcCcEE
Confidence 0 123568977653 3421 2455677887 888876553333333345555554443443
Q ss_pred E
Q 044601 167 L 167 (213)
Q Consensus 167 l 167 (213)
+
T Consensus 261 ~ 261 (325)
T 3jyn_A 261 V 261 (325)
T ss_dssp E
T ss_pred E
Confidence 3
No 260
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=65.41 E-value=27 Score=30.02 Aligned_cols=97 Identities=13% Similarity=0.092 Sum_probs=57.0
Q ss_pred CCCCCCeEEEEecCChh-HHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccc----cCC
Q 044601 11 HYSSKQRILLVGEGDFS-FSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQ----MSQ 85 (213)
Q Consensus 11 ~y~~~~~ILlVGEGnFS-FS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~----L~~ 85 (213)
...++++||++|-|..- ++..||+++| ...|+||....+ .++.++++|+...+ |.++ +.+
T Consensus 192 ~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~------------~~~~a~~lGa~~vi--~~~~~~~~~~~ 256 (376)
T 1e3i_A 192 KVTPGSTCAVFGLGCVGLSAIIGCKIAG-ASRIIAIDINGE------------KFPKAKALGATDCL--NPRELDKPVQD 256 (376)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCGG------------GHHHHHHTTCSEEE--CGGGCSSCHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHH------------HHHHHHHhCCcEEE--ccccccchHHH
Confidence 45678999999987653 4555677775 447888865422 24456778886443 3332 111
Q ss_pred C-ccccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCC-CeEEE
Q 044601 86 H-FFLRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEEN-GEIHV 143 (213)
Q Consensus 86 ~-~~l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~-G~ihv 143 (213)
. ..+....+|.||=. +|.. ..+..+.++|+ ++ |+|.+
T Consensus 257 ~v~~~~~~g~Dvvid~---~G~~-----------------~~~~~~~~~l~-~~~G~iv~ 295 (376)
T 1e3i_A 257 VITELTAGGVDYSLDC---AGTA-----------------QTLKAAVDCTV-LGWGSCTV 295 (376)
T ss_dssp HHHHHHTSCBSEEEES---SCCH-----------------HHHHHHHHTBC-TTTCEEEE
T ss_pred HHHHHhCCCccEEEEC---CCCH-----------------HHHHHHHHHhh-cCCCEEEE
Confidence 1 01112368987632 3421 23566778887 88 88654
No 261
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=65.32 E-value=38 Score=27.73 Aligned_cols=74 Identities=16% Similarity=0.143 Sum_probs=44.0
Q ss_pred CCeEEEEecCCh-----hHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHh-CCCEEEEeeeccccCCCcc
Q 044601 15 KQRILLVGEGDF-----SFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEE-RGCLVFYGVDAMQMSQHFF 88 (213)
Q Consensus 15 ~~~ILlVGEGnF-----SFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~-~g~~V~~gVDAt~L~~~~~ 88 (213)
+++||+.|=..+ ..+..|+++ +.+|++++.+.. .+.+++|.+ .+-...+.+|.++......
T Consensus 26 ~k~vlVTGasg~~GIG~~ia~~l~~~---G~~V~~~~r~~~----------~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~ 92 (280)
T 3nrc_A 26 GKKILITGLLSNKSIAYGIAKAMHRE---GAELAFTYVGQF----------KDRVEKLCAEFNPAAVLPCDVISDQEIKD 92 (280)
T ss_dssp TCEEEECCCCSTTCHHHHHHHHHHHT---TCEEEEEECTTC----------HHHHHHHHGGGCCSEEEECCTTCHHHHHH
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHc---CCEEEEeeCchH----------HHHHHHHHHhcCCceEEEeecCCHHHHHH
Confidence 578999995333 444445543 568888887751 123445533 2334567789888664322
Q ss_pred c------cCCcccEEEEcC
Q 044601 89 L------RTHKFDRVIYNF 101 (213)
Q Consensus 89 l------~~~~FDrIiFNF 101 (213)
+ ...+.|.||.|=
T Consensus 93 ~~~~~~~~~g~id~li~nA 111 (280)
T 3nrc_A 93 LFVELGKVWDGLDAIVHSI 111 (280)
T ss_dssp HHHHHHHHCSSCCEEEECC
T ss_pred HHHHHHHHcCCCCEEEECC
Confidence 1 125689998874
No 262
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=65.27 E-value=19 Score=29.94 Aligned_cols=97 Identities=15% Similarity=0.092 Sum_probs=60.9
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhC-CCEEEEeeeccccCCCccccCC
Q 044601 14 SKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEER-GCLVFYGVDAMQMSQHFFLRTH 92 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~-g~~V~~gVDAt~L~~~~~l~~~ 92 (213)
...+||=||=|.=.++..|++.. .+|+|+=. |++.+.. .++. ++. ...-||.++ ++..+
T Consensus 39 ~~~~vLDvGcGtG~~~~~l~~~~---~~v~gvD~-s~~ml~~-----------a~~~~~v~-~~~~~~e~~----~~~~~ 98 (257)
T 4hg2_A 39 ARGDALDCGCGSGQASLGLAEFF---ERVHAVDP-GEAQIRQ-----------ALRHPRVT-YAVAPAEDT----GLPPA 98 (257)
T ss_dssp CSSEEEEESCTTTTTHHHHHTTC---SEEEEEES-CHHHHHT-----------CCCCTTEE-EEECCTTCC----CCCSS
T ss_pred CCCCEEEEcCCCCHHHHHHHHhC---CEEEEEeC-cHHhhhh-----------hhhcCCce-eehhhhhhh----cccCC
Confidence 35789999888777888888653 57877643 3333322 1222 333 334466665 34578
Q ss_pred cccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEec
Q 044601 93 KFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHK 146 (213)
Q Consensus 93 ~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~ 146 (213)
.||.|+.+.-. .. .+ ...|++.+..+|+ |+|.+.|.-.
T Consensus 99 sfD~v~~~~~~---h~---------~~---~~~~~~e~~rvLk-pgG~l~~~~~ 136 (257)
T 4hg2_A 99 SVDVAIAAQAM---HW---------FD---LDRFWAELRRVAR-PGAVFAAVTY 136 (257)
T ss_dssp CEEEEEECSCC---TT---------CC---HHHHHHHHHHHEE-EEEEEEEEEE
T ss_pred cccEEEEeeeh---hH---------hh---HHHHHHHHHHHcC-CCCEEEEEEC
Confidence 89999986421 11 01 1258889999998 9999876543
No 263
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=64.58 E-value=17 Score=31.19 Aligned_cols=97 Identities=14% Similarity=0.192 Sum_probs=59.0
Q ss_pred EEeeeccccCCCccccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccC----CC
Q 044601 75 FYGVDAMQMSQHFFLRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEG----DP 150 (213)
Q Consensus 75 ~~gVDAt~L~~~~~l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~----~p 150 (213)
++.-|+...-+ .+..++||.|+.+=|--.....+-.+.....-...+...+..+..+|+ ++|.|.|.+.+. .|
T Consensus 17 ii~gD~~~~l~--~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk-~~G~i~i~~~d~~~~g~~ 93 (323)
T 1boo_A 17 MYIGDSLELLE--SFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLK-PDGSFVVDFGGAYMKGVP 93 (323)
T ss_dssp EEESCHHHHGG--GSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEE-EEEEEEEEECCCEETTEE
T ss_pred EEeCcHHHHHh--hCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCc-CCcEEEEEECCEecCCCc
Confidence 44457665322 234678999999988754321111111122234567888899999998 999999988653 22
Q ss_pred CC---cccHH-hHHHHhCcEEEEEeecC
Q 044601 151 YN---KWELV-KKAEKIGLTLQEVVPFC 174 (213)
Q Consensus 151 y~---~W~i~-~lA~~~gl~l~~~~~F~ 174 (213)
+. .|.+. .+....|+.+...+...
T Consensus 94 ~~~~~~~~~i~~~~~~~Gf~~~~~iiW~ 121 (323)
T 1boo_A 94 ARSIYNFRVLIRMIDEVGFFLAEDFYWF 121 (323)
T ss_dssp EECCHHHHHHHHHHHTTCCEEEEEEEEE
T ss_pred ccccchHHHHHHHHHhCCCEEEEEEEEe
Confidence 22 23322 34577899888766653
No 264
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=62.32 E-value=56 Score=26.99 Aligned_cols=123 Identities=14% Similarity=0.070 Sum_probs=64.3
Q ss_pred CCCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEE-EEeeeccccCCCccc--
Q 044601 14 SKQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLV-FYGVDAMQMSQHFFL-- 89 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V-~~gVDAt~L~~~~~l-- 89 (213)
++++||+.|=+.+ .-.++++++ ..+.+|+.+..+..... ....+.+++.|..+ .+.+|.++......+
T Consensus 46 ~gk~vlVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~-------~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~ 117 (291)
T 3ijr_A 46 KGKNVLITGGDSG-IGRAVSIAFAKEGANIAIAYLDEEGDA-------NETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQ 117 (291)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESSCHHHH-------HHHHHHHHTTTCCEEEEESCTTSHHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCchHHH-------HHHHHHHHhcCCcEEEEECCCCCHHHHHHHHH
Confidence 3578999996543 333444433 13578888888765322 22234456666544 567898886543221
Q ss_pred ----cCCcccEEEEcCCcCCC-c-----ccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEe
Q 044601 90 ----RTHKFDRVIYNFPHVGF-I-----FRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTH 145 (213)
Q Consensus 90 ----~~~~FDrIiFNFPH~G~-~-----~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl 145 (213)
+....|.+|-|=-.... . ..++-.+.+..|-.=.....+.+.+.++ ..|.|..+.
T Consensus 118 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~-~~g~iv~is 182 (291)
T 3ijr_A 118 ETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLK-QGDVIINTA 182 (291)
T ss_dssp HHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCC-TTCEEEEEC
T ss_pred HHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHh-hCCEEEEEe
Confidence 12468998887321111 0 1111123343443323334445556665 677765543
No 265
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=61.87 E-value=5.2 Score=35.28 Aligned_cols=89 Identities=12% Similarity=0.123 Sum_probs=49.8
Q ss_pred CCeEEEEecCC--------hhHHHHHHHH---hCCC--CeEEEeccCCHHHH----HhhcchHHH-HHHHHHhCCCEEEE
Q 044601 15 KQRILLVGEGD--------FSFSLCLARE---FGFA--HNMVATCLDTQETI----ANKYSNAVD-NVRELEERGCLVFY 76 (213)
Q Consensus 15 ~~~ILlVGEGn--------FSFS~aLa~~---~~~~--~~l~ATs~ds~~~l----~~kY~~a~~-ni~~L~~~g~~V~~ 76 (213)
..++++||-|+ +-++..|+.. .+.. ..|+ -.+..+.+ ....++... -.+.|++.|++++.
T Consensus 142 ~~~~vVVGgG~~~~~~G~~~E~a~~la~~l~~~g~~~~~~V~--~v~~~~~~~~~~l~~~~~~~~~l~~~l~~~GV~i~~ 219 (430)
T 3h28_A 142 NPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMT--FITSEPYLGHFGVGGIGASKRLVEDLFAERNIDWIA 219 (430)
T ss_dssp SCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEE--EECSSSSTTCTTTTCSTTHHHHHHHHHHHTTCEEEC
T ss_pred cCCeEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCccceEEE--EecCCccccccccCcchHHHHHHHHHHHHCCCEEEe
Confidence 34578899886 6677666543 3321 2333 22222222 112233333 34788999999998
Q ss_pred eeeccccCCCc-cc-------cCCcccEEEEcCCcCC
Q 044601 77 GVDAMQMSQHF-FL-------RTHKFDRVIYNFPHVG 105 (213)
Q Consensus 77 gVDAt~L~~~~-~l-------~~~~FDrIiFNFPH~G 105 (213)
+..++.+.... .+ ....+|.||+--|..+
T Consensus 220 ~~~v~~v~~~~v~~~~~~~~g~~i~~D~vv~a~G~~~ 256 (430)
T 3h28_A 220 NVAVKAIEPDKVIYEDLNGNTHEVPAKFTMFMPSFQG 256 (430)
T ss_dssp SCEEEEECSSEEEEECTTSCEEEEECSEEEEECEEEC
T ss_pred CCEEEEEeCCeEEEEecCCCceEEeeeEEEECCCCcc
Confidence 87777765432 11 1245899998655554
No 266
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=60.93 E-value=15 Score=32.32 Aligned_cols=76 Identities=8% Similarity=0.070 Sum_probs=44.3
Q ss_pred CCCCCCeEEEEecCChh-HHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCC-cc
Q 044601 11 HYSSKQRILLVGEGDFS-FSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQH-FF 88 (213)
Q Consensus 11 ~y~~~~~ILlVGEGnFS-FS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~-~~ 88 (213)
.-.++++||++|-|..- ++..||++.| ...|+||.-.. +.++.++++|+...++-+...+.+. ..
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~------------~~~~~~~~lGa~~vi~~~~~~~~~~i~~ 276 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHAG-ASKVILSEPSE------------VRRNLAKELGADHVIDPTKENFVEAVLD 276 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCH------------HHHHHHHHHTCSEEECTTTSCHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCH------------HHHHHHHHcCCCEEEcCCCCCHHHHHHH
Confidence 45678999999988653 4455577775 44888886442 2345566778765544322222111 01
Q ss_pred -ccCCcccEEEE
Q 044601 89 -LRTHKFDRVIY 99 (213)
Q Consensus 89 -l~~~~FDrIiF 99 (213)
.....+|.|+=
T Consensus 277 ~t~g~g~D~vid 288 (404)
T 3ip1_A 277 YTNGLGAKLFLE 288 (404)
T ss_dssp HTTTCCCSEEEE
T ss_pred HhCCCCCCEEEE
Confidence 12346887763
No 267
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=60.91 E-value=18 Score=27.86 Aligned_cols=95 Identities=15% Similarity=0.131 Sum_probs=55.0
Q ss_pred CCCCCCeEEEEe-cCChhHHHHH-HHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCcc
Q 044601 11 HYSSKQRILLVG-EGDFSFSLCL-AREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFF 88 (213)
Q Consensus 11 ~y~~~~~ILlVG-EGnFSFS~aL-a~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~ 88 (213)
...++++||++| -|..-.+.+. ++..| .+|++++.+.+ .++.+++.|+... +|.++-.....
T Consensus 35 ~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G--~~V~~~~~~~~------------~~~~~~~~g~~~~--~d~~~~~~~~~ 98 (198)
T 1pqw_A 35 RLSPGERVLIHSATGGVGMAAVSIAKMIG--ARIYTTAGSDA------------KREMLSRLGVEYV--GDSRSVDFADE 98 (198)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHHT--CEEEEEESSHH------------HHHHHHTTCCSEE--EETTCSTHHHH
T ss_pred CCCCCCEEEEeeCCChHHHHHHHHHHHcC--CEEEEEeCCHH------------HHHHHHHcCCCEE--eeCCcHHHHHH
Confidence 456789999999 6776655444 45554 57888876521 1233455677544 34433211001
Q ss_pred ----ccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEE
Q 044601 89 ----LRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHV 143 (213)
Q Consensus 89 ----l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihv 143 (213)
.....+|.||-| +|. ..+..+.++|+ ++|+|.+
T Consensus 99 ~~~~~~~~~~D~vi~~---~g~------------------~~~~~~~~~l~-~~G~~v~ 135 (198)
T 1pqw_A 99 ILELTDGYGVDVVLNS---LAG------------------EAIQRGVQILA-PGGRFIE 135 (198)
T ss_dssp HHHHTTTCCEEEEEEC---CCT------------------HHHHHHHHTEE-EEEEEEE
T ss_pred HHHHhCCCCCeEEEEC---Cch------------------HHHHHHHHHhc-cCCEEEE
Confidence 112469998854 242 12566778887 8887654
No 268
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=60.76 E-value=54 Score=27.29 Aligned_cols=116 Identities=15% Similarity=0.109 Sum_probs=68.3
Q ss_pred CCCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhC--CCEEEE-eeeccccCCCc
Q 044601 11 HYSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEER--GCLVFY-GVDAMQMSQHF 87 (213)
Q Consensus 11 ~y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~--g~~V~~-gVDAt~L~~~~ 87 (213)
...++++||=||=|.=.||..|++. ..|+|.=+... +....... + ..+.. ++.++. ..|++.|.
T Consensus 71 ~~~~g~~VLDlGcGtG~~s~~la~~----~~V~gvD~s~m--~~~a~~~~---~-~~~~~~~~v~~~~~~~D~~~l~--- 137 (265)
T 2oxt_A 71 YVELTGRVVDLGCGRGGWSYYAASR----PHVMDVRAYTL--GVGGHEVP---R-ITESYGWNIVKFKSRVDIHTLP--- 137 (265)
T ss_dssp SCCCCEEEEEESCTTSHHHHHHHTS----TTEEEEEEECC--CCSSCCCC---C-CCCBTTGGGEEEECSCCTTTSC---
T ss_pred CCCCCCEEEEeCcCCCHHHHHHHHc----CcEEEEECchh--hhhhhhhh---h-hhhccCCCeEEEecccCHhHCC---
Confidence 3456789999998888888888876 36777544431 10000000 0 00111 344442 45888753
Q ss_pred cccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCC--eEEEEeccCCCCCc
Q 044601 88 FLRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENG--EIHVTHKEGDPYNK 153 (213)
Q Consensus 88 ~l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G--~ihvTl~~~~py~~ 153 (213)
...||.|+-++.++.+.. .+ .+...+. .+..+..+|+ |+| .+.+.... |+..
T Consensus 138 ---~~~fD~V~sd~~~~~~~~------~~-d~~~~l~-~L~~~~r~Lk-pGG~~~fv~kv~~--~~~~ 191 (265)
T 2oxt_A 138 ---VERTDVIMCDVGESSPKW------SV-ESERTIK-ILELLEKWKV-KNPSADFVVKVLC--PYSV 191 (265)
T ss_dssp ---CCCCSEEEECCCCCCSCH------HH-HHHHHHH-HHHHHHHHHH-HCTTCEEEEEESC--TTSH
T ss_pred ---CCCCcEEEEeCcccCCcc------ch-hHHHHHH-HHHHHHHHhc-cCCCeEEEEEeCC--CCCh
Confidence 467999999998554311 11 1111122 6788889998 999 88887765 5543
No 269
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=60.38 E-value=36 Score=29.15 Aligned_cols=98 Identities=12% Similarity=0.143 Sum_probs=56.5
Q ss_pred CCCCCCeEEEEecCChh-HHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccc----cCC
Q 044601 11 HYSSKQRILLVGEGDFS-FSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQ----MSQ 85 (213)
Q Consensus 11 ~y~~~~~ILlVGEGnFS-FS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~----L~~ 85 (213)
...++++||++|-|..- ++..||++.| ...|+||....+ .++.++++|+...+ |.++ +.+
T Consensus 187 ~~~~g~~VlV~GaG~vG~~avqla~~~G-a~~Vi~~~~~~~------------~~~~~~~lGa~~vi--~~~~~~~~~~~ 251 (373)
T 2fzw_A 187 KLEPGSVCAVFGLGGVGLAVIMGCKVAG-ASRIIGVDINKD------------KFARAKEFGATECI--NPQDFSKPIQE 251 (373)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEECSCGG------------GHHHHHHHTCSEEE--CGGGCSSCHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHH------------HHHHHHHcCCceEe--ccccccccHHH
Confidence 45678999999977543 4555677776 447888865422 13345566875443 3332 111
Q ss_pred C-ccccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCC-CeEEEE
Q 044601 86 H-FFLRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEEN-GEIHVT 144 (213)
Q Consensus 86 ~-~~l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~-G~ihvT 144 (213)
. ..+....+|.||=. +|.. ..+..+.++|+ ++ |++.+.
T Consensus 252 ~v~~~~~~g~D~vid~---~g~~-----------------~~~~~~~~~l~-~~~G~iv~~ 291 (373)
T 2fzw_A 252 VLIEMTDGGVDYSFEC---IGNV-----------------KVMRAALEACH-KGWGVSVVV 291 (373)
T ss_dssp HHHHHTTSCBSEEEEC---SCCH-----------------HHHHHHHHTBC-TTTCEEEEC
T ss_pred HHHHHhCCCCCEEEEC---CCcH-----------------HHHHHHHHhhc-cCCcEEEEE
Confidence 1 11112368988643 3321 23566778887 88 987543
No 270
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=60.24 E-value=60 Score=27.05 Aligned_cols=77 Identities=19% Similarity=0.183 Sum_probs=47.7
Q ss_pred CCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEE-EEeeeccccCCCccc---
Q 044601 15 KQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLV-FYGVDAMQMSQHFFL--- 89 (213)
Q Consensus 15 ~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V-~~gVDAt~L~~~~~l--- 89 (213)
++.+|+-|=+. --=+++|+.+ ..+.+|+.+..+ ++. .++..++|++.|.++ .+.+|.++......+
T Consensus 7 gKvalVTGas~-GIG~aiA~~la~~Ga~Vv~~~~~-~~~-------~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~ 77 (254)
T 4fn4_A 7 NKVVIVTGAGS-GIGRAIAKKFALNDSIVVAVELL-EDR-------LNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRR 77 (254)
T ss_dssp TCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESC-HHH-------HHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHH
T ss_pred CCEEEEeCCCC-HHHHHHHHHHHHcCCEEEEEECC-HHH-------HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence 57777777432 2333334333 135688887765 322 344567888888765 578899987754332
Q ss_pred ---cCCcccEEEEc
Q 044601 90 ---RTHKFDRVIYN 100 (213)
Q Consensus 90 ---~~~~FDrIiFN 100 (213)
+-.+.|.+|-|
T Consensus 78 ~~~~~G~iDiLVNN 91 (254)
T 4fn4_A 78 TFETYSRIDVLCNN 91 (254)
T ss_dssp HHHHHSCCCEEEEC
T ss_pred HHHHcCCCCEEEEC
Confidence 13678999887
No 271
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=60.09 E-value=96 Score=31.30 Aligned_cols=109 Identities=12% Similarity=0.050 Sum_probs=69.2
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHh---CCC--EEEEeeeccccCCCcc
Q 044601 14 SKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEE---RGC--LVFYGVDAMQMSQHFF 88 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~---~g~--~V~~gVDAt~L~~~~~ 88 (213)
+..+||=||=|.=.++..|++..++...|++.=++ ++ +.+ .+..++..... .|. .-+..-|++.+..
T Consensus 721 ~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS-~e-mLe---~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~--- 792 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDIS-PK-GLA---RAAKMLHVKLNKEACNVKSATLYDGSILEFDS--- 792 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESC-HH-HHH---HHHHHHHHHTTTTCSSCSEEEEEESCTTSCCT---
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECC-HH-HHH---HHHHHhhhccchhhcCCCceEEEECchHhCCc---
Confidence 67899999999999999999875434577766554 33 333 24455544321 232 2344567777542
Q ss_pred ccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEe
Q 044601 89 LRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTH 145 (213)
Q Consensus 89 l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl 145 (213)
....||.|+.+.--- +.....+..|++.+..+|+ |+ .+.|+.
T Consensus 793 -~d~sFDlVV~~eVLe------------HL~dp~l~~~L~eI~RvLK-PG-~LIIST 834 (950)
T 3htx_A 793 -RLHDVDIGTCLEVIE------------HMEEDQACEFGEKVLSLFH-PK-LLIVST 834 (950)
T ss_dssp -TSCSCCEEEEESCGG------------GSCHHHHHHHHHHHHHTTC-CS-EEEEEE
T ss_pred -ccCCeeEEEEeCchh------------hCChHHHHHHHHHHHHHcC-CC-EEEEEe
Confidence 357899999953211 1122445678899999998 76 666664
No 272
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=60.01 E-value=28 Score=28.05 Aligned_cols=69 Identities=10% Similarity=0.158 Sum_probs=42.7
Q ss_pred CeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCCcc
Q 044601 16 QRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTHKF 94 (213)
Q Consensus 16 ~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~~F 94 (213)
++||+.| +.|= -.+|++++ ..+..|++++.+.. ..+.|...++.++ ..|.+++. ...+
T Consensus 6 ~~ilVtG-aG~i-G~~l~~~L~~~g~~V~~~~r~~~------------~~~~~~~~~~~~~-~~D~~d~~------~~~~ 64 (286)
T 3ius_A 6 GTLLSFG-HGYT-ARVLSRALAPQGWRIIGTSRNPD------------QMEAIRASGAEPL-LWPGEEPS------LDGV 64 (286)
T ss_dssp CEEEEET-CCHH-HHHHHHHHGGGTCEEEEEESCGG------------GHHHHHHTTEEEE-ESSSSCCC------CTTC
T ss_pred CcEEEEC-CcHH-HHHHHHHHHHCCCEEEEEEcChh------------hhhhHhhCCCeEE-Eecccccc------cCCC
Confidence 6899999 5332 33444443 33678999987642 1234455676554 46888865 2458
Q ss_pred cEEEEcCCcCC
Q 044601 95 DRVIYNFPHVG 105 (213)
Q Consensus 95 DrIiFNFPH~G 105 (213)
|.||.+-+...
T Consensus 65 d~vi~~a~~~~ 75 (286)
T 3ius_A 65 THLLISTAPDS 75 (286)
T ss_dssp CEEEECCCCBT
T ss_pred CEEEECCCccc
Confidence 99998665443
No 273
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=59.75 E-value=10 Score=34.47 Aligned_cols=64 Identities=20% Similarity=0.256 Sum_probs=35.2
Q ss_pred CCCCeEEEEecCChhHHHH-HHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHH-HHHhCC---CEEEEeeeccccC
Q 044601 13 SSKQRILLVGEGDFSFSLC-LAREFGFAHNMVATCLDTQETIANKYSNAVDNVR-ELEERG---CLVFYGVDAMQMS 84 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~a-La~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~-~L~~~g---~~V~~gVDAt~L~ 84 (213)
-.++|+++.||++..++++ +++.+|-....++|...+.+ | .+-++ .|+..| +.|+.+.|...|.
T Consensus 310 l~gkrv~i~~~~~~~~~l~~~L~elG~~vv~v~~~~~~~~-----~---~~~~~~ll~~~~~~~~~v~~~~d~~~l~ 378 (458)
T 1mio_B 310 LQGKKVALLGDPDEIIALSKFIIELGAIPKYVVTGTPGMK-----F---QKEIDAMLAEAGIEGSKVKVEGDFFDVH 378 (458)
T ss_dssp HTTCEEEEEECHHHHHHHHHHHHTTTCEEEEEEESSCCHH-----H---HHHHHHHHHTTTCCSCEEEESCBHHHHH
T ss_pred cCCCEEEEEcCchHHHHHHHHHHHCCCEEEEEEeCCCCHH-----H---HHHHHHHHHhcCCCCCEEEECCCHHHHH
Confidence 3689999999997777765 23455532333334444322 1 11222 234433 5677777766554
No 274
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=59.74 E-value=17 Score=31.82 Aligned_cols=50 Identities=16% Similarity=0.263 Sum_probs=35.9
Q ss_pred CCCCCCeEEEEecCCh-hHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCE
Q 044601 11 HYSSKQRILLVGEGDF-SFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCL 73 (213)
Q Consensus 11 ~y~~~~~ILlVGEGnF-SFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~ 73 (213)
...++++||++|=|.. .++..||++.| ...|+||+... +.++.++++|+.
T Consensus 182 ~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~------------~~~~~a~~lGa~ 232 (398)
T 2dph_A 182 GVKPGSHVYIAGAGPVGRCAAAGARLLG-AACVIVGDQNP------------ERLKLLSDAGFE 232 (398)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEEESCH------------HHHHHHHTTTCE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCH------------HHHHHHHHcCCc
Confidence 4567899999998765 45667788886 44899987542 234567788985
No 275
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=59.59 E-value=12 Score=30.42 Aligned_cols=80 Identities=13% Similarity=0.090 Sum_probs=48.2
Q ss_pred CCCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCC--CEEEEeeeccccCCCccc-
Q 044601 14 SKQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEERG--CLVFYGVDAMQMSQHFFL- 89 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g--~~V~~gVDAt~L~~~~~l- 89 (213)
++++||+.|=.++..-.++++++ ..+.+|++++.+.. ...+..++|++.+ -...+.+|.++......+
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~--------~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~ 92 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHER--------RLGETRDQLADLGLGRVEAVVCDVTSTEAVDALI 92 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHH--------HHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHH--------HHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHH
Confidence 46789999974444445555443 23578988887642 1234456666553 345677899886643221
Q ss_pred -----cCCcccEEEEcC
Q 044601 90 -----RTHKFDRVIYNF 101 (213)
Q Consensus 90 -----~~~~FDrIiFNF 101 (213)
+..+.|.||.|=
T Consensus 93 ~~~~~~~g~id~li~~A 109 (266)
T 3o38_A 93 TQTVEKAGRLDVLVNNA 109 (266)
T ss_dssp HHHHHHHSCCCEEEECC
T ss_pred HHHHHHhCCCcEEEECC
Confidence 124689888773
No 276
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=59.31 E-value=47 Score=28.50 Aligned_cols=97 Identities=11% Similarity=0.127 Sum_probs=56.3
Q ss_pred CCCCCCeEEEEecCChh-HHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccc----cCC
Q 044601 11 HYSSKQRILLVGEGDFS-FSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQ----MSQ 85 (213)
Q Consensus 11 ~y~~~~~ILlVGEGnFS-FS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~----L~~ 85 (213)
...++++||++|-|..- ++..||++.| ...|+||....+ .++.++++|+...+ |.++ +.+
T Consensus 188 ~~~~g~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~~~~------------~~~~~~~lGa~~vi--~~~~~~~~~~~ 252 (374)
T 2jhf_A 188 KVTQGSTCAVFGLGGVGLSVIMGCKAAG-AARIIGVDINKD------------KFAKAKEVGATECV--NPQDYKKPIQE 252 (374)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCGG------------GHHHHHHTTCSEEE--CGGGCSSCHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHH------------HHHHHHHhCCceEe--cccccchhHHH
Confidence 45678999999977543 4455577765 337888865422 24456678886443 3332 111
Q ss_pred C-ccccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCC-CeEEE
Q 044601 86 H-FFLRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEEN-GEIHV 143 (213)
Q Consensus 86 ~-~~l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~-G~ihv 143 (213)
. ..+....+|.||=. +|.. ..+..+..+|+ ++ |+|.+
T Consensus 253 ~~~~~~~~g~D~vid~---~g~~-----------------~~~~~~~~~l~-~~~G~iv~ 291 (374)
T 2jhf_A 253 VLTEMSNGGVDFSFEV---IGRL-----------------DTMVTALSCCQ-EAYGVSVI 291 (374)
T ss_dssp HHHHHTTSCBSEEEEC---SCCH-----------------HHHHHHHHHBC-TTTCEEEE
T ss_pred HHHHHhCCCCcEEEEC---CCCH-----------------HHHHHHHHHhh-cCCcEEEE
Confidence 1 11112378987643 3321 23566778887 88 88754
No 277
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=59.30 E-value=95 Score=27.43 Aligned_cols=106 Identities=13% Similarity=0.067 Sum_probs=55.3
Q ss_pred eEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCCcccEEEEcCCcCCCcccccchHHHHhhH
Q 044601 41 NMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTHKFDRVIYNFPHVGFIFRENSYCQIQLNK 120 (213)
Q Consensus 41 ~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~ 120 (213)
.|++.-.| ..+.+ -+..|++...-.+..-+..-|+.++.. ...||.||.|-|---..+. -....
T Consensus 265 ~V~GvDid--~~al~---~Ar~Na~~~gl~~~I~~~~~D~~~~~~-----~~~fD~Iv~NPPYg~rl~~------~~~l~ 328 (393)
T 3k0b_A 265 NIIGGDID--ARLIE---IAKQNAVEAGLGDLITFRQLQVADFQT-----EDEYGVVVANPPYGERLED------EEAVR 328 (393)
T ss_dssp CEEEEESC--HHHHH---HHHHHHHHTTCTTCSEEEECCGGGCCC-----CCCSCEEEECCCCCCSHHH------HHHHH
T ss_pred eEEEEECC--HHHHH---HHHHHHHHcCCCCceEEEECChHhCCC-----CCCCCEEEECCCCccccCC------chhHH
Confidence 46555444 33333 256666543221212355678877642 2479999999886332110 11222
Q ss_pred HHHHHHHHHHHhhcccCCCeEEEEeccCCCCCcccHHhHHHHhCcEEEEEeecC
Q 044601 121 ELVKGFLRNAKLLLKEENGEIHVTHKEGDPYNKWELVKKAEKIGLTLQEVVPFC 174 (213)
Q Consensus 121 ~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py~~W~i~~lA~~~gl~l~~~~~F~ 174 (213)
.|...+-+..+. + ++|.+.|-..+.+ +.+..|+.-.++.++.
T Consensus 329 ~ly~~lg~~lk~-~--~g~~~~iit~~~~---------l~~~~g~~~~~~~~l~ 370 (393)
T 3k0b_A 329 QLYREMGIVYKR-M--PTWSVYVLTSYEL---------FEEVYGKKATKKRKLY 370 (393)
T ss_dssp HHHHHHHHHHHT-C--TTCEEEEEECCTT---------HHHHHTSCCSEEEEEC
T ss_pred HHHHHHHHHHhc-C--CCCEEEEEECCHH---------HHHHhCCCcccceEEe
Confidence 333333333333 3 5888777654332 6666676666665554
No 278
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=59.09 E-value=44 Score=28.66 Aligned_cols=98 Identities=18% Similarity=0.191 Sum_probs=57.2
Q ss_pred CCCCCCeEEEEecCChh-HHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccc----cCC
Q 044601 11 HYSSKQRILLVGEGDFS-FSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQ----MSQ 85 (213)
Q Consensus 11 ~y~~~~~ILlVGEGnFS-FS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~----L~~ 85 (213)
...++++||++|-|..- ++..||+++| ...|+||+...+ .++.++++|+.... |.++ +.+
T Consensus 189 ~~~~g~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~~~~------------~~~~~~~lGa~~vi--~~~~~~~~~~~ 253 (374)
T 1cdo_A 189 KVEPGSTCAVFGLGAVGLAAVMGCHSAG-AKRIIAVDLNPD------------KFEKAKVFGATDFV--NPNDHSEPISQ 253 (374)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCGG------------GHHHHHHTTCCEEE--CGGGCSSCHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHH------------HHHHHHHhCCceEE--eccccchhHHH
Confidence 45678999999977543 4455677765 337888865422 24456678886443 4332 111
Q ss_pred C-ccccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCC-CeEEEE
Q 044601 86 H-FFLRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEEN-GEIHVT 144 (213)
Q Consensus 86 ~-~~l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~-G~ihvT 144 (213)
. ..+....+|.||=. +|.. ..+..+.++|+ ++ |+|.+.
T Consensus 254 ~~~~~~~~g~D~vid~---~g~~-----------------~~~~~~~~~l~-~~~G~iv~~ 293 (374)
T 1cdo_A 254 VLSKMTNGGVDFSLEC---VGNV-----------------GVMRNALESCL-KGWGVSVLV 293 (374)
T ss_dssp HHHHHHTSCBSEEEEC---SCCH-----------------HHHHHHHHTBC-TTTCEEEEC
T ss_pred HHHHHhCCCCCEEEEC---CCCH-----------------HHHHHHHHHhh-cCCcEEEEE
Confidence 1 01112368987642 3321 23566778897 88 986543
No 279
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=58.99 E-value=73 Score=26.03 Aligned_cols=122 Identities=14% Similarity=0.037 Sum_probs=64.3
Q ss_pred CCCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCE-EEEeeeccccCCCccc--
Q 044601 14 SKQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCL-VFYGVDAMQMSQHFFL-- 89 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~-V~~gVDAt~L~~~~~l-- 89 (213)
+++++|+.|=+.+ .-+++++++ ..+.+|+.+...+.+.+ ....++|++.|.. +.+.+|.++......+
T Consensus 30 ~gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~-------~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~ 101 (271)
T 3v2g_A 30 AGKTAFVTGGSRG-IGAAIAKRLALEGAAVALTYVNAAERA-------QAVVSEIEQAGGRAVAIRADNRDAEAIEQAIR 101 (271)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESSCHHHH-------HHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCCHHHH-------HHHHHHHHhcCCcEEEEECCCCCHHHHHHHHH
Confidence 3578999996642 233444433 13568888866654322 3345667776654 4677888876643221
Q ss_pred ----cCCcccEEEEcCCcCCCcc-----cccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEE
Q 044601 90 ----RTHKFDRVIYNFPHVGFIF-----RENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVT 144 (213)
Q Consensus 90 ----~~~~FDrIiFNFPH~G~~~-----~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvT 144 (213)
...+.|.+|.|=--..... .++-.+.+..|-.=.....+.+.+.+. ..|.|...
T Consensus 102 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~-~~g~iv~i 164 (271)
T 3v2g_A 102 ETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLG-DGGRIITI 164 (271)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCC-TTCEEEEE
T ss_pred HHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHh-cCCEEEEE
Confidence 1246898887732211111 111123333342223334455566666 67876554
No 280
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=58.35 E-value=54 Score=26.33 Aligned_cols=80 Identities=13% Similarity=0.116 Sum_probs=43.1
Q ss_pred CCCeEEEEecCCh-hHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHH-hCC--CEEEEeeeccccCCCcc
Q 044601 14 SKQRILLVGEGDF-SFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELE-ERG--CLVFYGVDAMQMSQHFF 88 (213)
Q Consensus 14 ~~~~ILlVGEGnF-SFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~-~~g--~~V~~gVDAt~L~~~~~ 88 (213)
+++++|+.|=+.+ -.-+++|+++ ..+.+|+++..+... .+.++++. +.+ -...+.+|.++......
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~---------~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~ 76 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERL---------EKSVHELAGTLDRNDSIILPCDVTNDAEIET 76 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGG---------HHHHHHHHHTSSSCCCEEEECCCSSSHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHH---------HHHHHHHHHhcCCCCceEEeCCCCCHHHHHH
Confidence 3678999997654 2333444333 125688888765321 11122222 222 23566789888664332
Q ss_pred c------cCCcccEEEEcCC
Q 044601 89 L------RTHKFDRVIYNFP 102 (213)
Q Consensus 89 l------~~~~FDrIiFNFP 102 (213)
+ ...+.|.||.|=-
T Consensus 77 ~~~~~~~~~g~id~li~~Ag 96 (266)
T 3oig_A 77 CFASIKEQVGVIHGIAHCIA 96 (266)
T ss_dssp HHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHhCCeeEEEEccc
Confidence 1 1246898887743
No 281
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=57.77 E-value=15 Score=31.71 Aligned_cols=99 Identities=13% Similarity=0.067 Sum_probs=57.5
Q ss_pred CCCCCCeEEEEecCChh-HHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeec--cccCCC-
Q 044601 11 HYSSKQRILLVGEGDFS-FSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDA--MQMSQH- 86 (213)
Q Consensus 11 ~y~~~~~ILlVGEGnFS-FS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDA--t~L~~~- 86 (213)
...++++||++|-|..- ++..||++.| ...|++|....+ .++.++++|+...++.+. ..+.+.
T Consensus 188 ~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~------------~~~~a~~lGa~~vi~~~~~~~~~~~~i 254 (373)
T 1p0f_A 188 KVTPGSTCAVFGLGGVGFSAIVGCKAAG-ASRIIGVGTHKD------------KFPKAIELGATECLNPKDYDKPIYEVI 254 (373)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEECSCGG------------GHHHHHHTTCSEEECGGGCSSCHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEECCCHH------------HHHHHHHcCCcEEEecccccchHHHHH
Confidence 45678999999987653 4556678876 447888865422 244566788865433221 111111
Q ss_pred ccccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCC-CeEEE
Q 044601 87 FFLRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEEN-GEIHV 143 (213)
Q Consensus 87 ~~l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~-G~ihv 143 (213)
..+....+|.||=. +|.. ..+..+..+|+ ++ |+|.+
T Consensus 255 ~~~t~gg~Dvvid~---~g~~-----------------~~~~~~~~~l~-~~~G~iv~ 291 (373)
T 1p0f_A 255 CEKTNGGVDYAVEC---AGRI-----------------ETMMNALQSTY-CGSGVTVV 291 (373)
T ss_dssp HHHTTSCBSEEEEC---SCCH-----------------HHHHHHHHTBC-TTTCEEEE
T ss_pred HHHhCCCCCEEEEC---CCCH-----------------HHHHHHHHHHh-cCCCEEEE
Confidence 11112378987632 3321 23566778887 88 88654
No 282
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=57.73 E-value=1e+02 Score=27.24 Aligned_cols=105 Identities=12% Similarity=0.088 Sum_probs=56.4
Q ss_pred eEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCCcccEEEEcCCcCCCcccccchHHHHhhH
Q 044601 41 NMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTHKFDRVIYNFPHVGFIFRENSYCQIQLNK 120 (213)
Q Consensus 41 ~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~ 120 (213)
.|++.-.| ..+.+ -+..|++...-.+..-+..-|+.++.. ...||.||.|=|---..+.+ ....
T Consensus 258 ~v~GvDid--~~al~---~Ar~Na~~~gl~~~I~~~~~D~~~l~~-----~~~fD~Iv~NPPYG~rl~~~------~~l~ 321 (384)
T 3ldg_A 258 DISGFDFD--GRMVE---IARKNAREVGLEDVVKLKQMRLQDFKT-----NKINGVLISNPPYGERLLDD------KAVD 321 (384)
T ss_dssp CEEEEESC--HHHHH---HHHHHHHHTTCTTTEEEEECCGGGCCC-----CCCSCEEEECCCCTTTTSCH------HHHH
T ss_pred eEEEEECC--HHHHH---HHHHHHHHcCCCCceEEEECChHHCCc-----cCCcCEEEECCchhhccCCH------HHHH
Confidence 46655554 33333 256676543222234466778888753 24799999999964332211 1222
Q ss_pred HHHHHHHHHHHhhcccCCCeEEEEeccCCCCCcccHHhHHHHhCcEEEEEeec
Q 044601 121 ELVKGFLRNAKLLLKEENGEIHVTHKEGDPYNKWELVKKAEKIGLTLQEVVPF 173 (213)
Q Consensus 121 ~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py~~W~i~~lA~~~gl~l~~~~~F 173 (213)
.|...+.+..+. + ++|.+.|-..+.+ +.+..|+.-.++.++
T Consensus 322 ~ly~~lg~~lk~-~--~g~~~~iit~~~~---------l~~~~g~~~~~~~~l 362 (384)
T 3ldg_A 322 ILYNEMGETFAP-L--KTWSQFILTNDTD---------FEQKFGRKADKKRKL 362 (384)
T ss_dssp HHHHHHHHHHTT-C--TTSEEEEEESCTT---------HHHHHTSCCSEEEEE
T ss_pred HHHHHHHHHHhh-C--CCcEEEEEECCHH---------HHHHhCCCccceeEE
Confidence 344333333333 3 5888877664432 666667665555554
No 283
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=57.64 E-value=31 Score=29.02 Aligned_cols=114 Identities=19% Similarity=0.171 Sum_probs=66.5
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhC--CCEEEE-eeeccccCCCcc
Q 044601 12 YSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEER--GCLVFY-GVDAMQMSQHFF 88 (213)
Q Consensus 12 y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~--g~~V~~-gVDAt~L~~~~~ 88 (213)
..++++||=||=|.=.||..|++. ..|+|.=+... +.. +.++....+.. ++.++. ..|++.|.
T Consensus 80 ~~~g~~VLDlGcGtG~~s~~la~~----~~V~gVD~s~m--~~~----a~~~~~~~~~~~~~v~~~~~~~D~~~l~---- 145 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWSYYAASQ----PNVREVKAYTL--GTS----GHEKPRLVETFGWNLITFKSKVDVTKME---- 145 (276)
T ss_dssp CCCCEEEEEESCTTCHHHHHHHTS----TTEEEEEEECC--CCT----TSCCCCCCCCTTGGGEEEECSCCGGGCC----
T ss_pred CCCCCEEEEeccCCCHHHHHHHHc----CCEEEEECchh--hhh----hhhchhhhhhcCCCeEEEeccCcHhhCC----
Confidence 456789999988888888888876 36776544431 100 00000000111 344442 45888753
Q ss_pred ccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCC--eEEEEeccCCCCC
Q 044601 89 LRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENG--EIHVTHKEGDPYN 152 (213)
Q Consensus 89 l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G--~ihvTl~~~~py~ 152 (213)
...||.|+-++.+..... .+ .+...+. .+..+..+|+ |+| .+.+.... |+.
T Consensus 146 --~~~fD~Vvsd~~~~~~~~------~~-d~~~~l~-~L~~~~r~Lk-pGG~~~~v~~~~~--~~~ 198 (276)
T 2wa2_A 146 --PFQADTVLCDIGESNPTA------AV-EASRTLT-VLNVISRWLE-YNQGCGFCVKVLN--PYS 198 (276)
T ss_dssp --CCCCSEEEECCCCCCSCH------HH-HHHHHHH-HHHHHHHHHH-HSTTCEEEEEESC--CCS
T ss_pred --CCCcCEEEECCCcCCCch------hh-hHHHHHH-HHHHHHHHhc-cCCCcEEEEEeCC--CCc
Confidence 467999999998554311 11 1111122 6778889998 999 88886655 554
No 284
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=57.31 E-value=18 Score=33.05 Aligned_cols=99 Identities=17% Similarity=0.086 Sum_probs=62.5
Q ss_pred CCCeEEEEecC-------ChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCC
Q 044601 14 SKQRILLVGEG-------DFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQH 86 (213)
Q Consensus 14 ~~~~ILlVGEG-------nFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~ 86 (213)
+..+||=||=| .. .|+.+++.+.+...|++.=+.... . ....+++ +.--|++++.--
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG-~Sl~la~~~fP~a~V~GVDiSp~m----~----------~~~~rI~-fv~GDa~dlpf~ 279 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGG-GSLRMWKSFFPRGQIYGLDIMDKS----H----------VDELRIR-TIQGDQNDAEFL 279 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCC-HHHHHHHHHCTTCEEEEEESSCCG----G----------GCBTTEE-EEECCTTCHHHH
T ss_pred CCCEEEEEecCCCcCCCCCH-HHHHHHHHhCCCCEEEEEECCHHH----h----------hcCCCcE-EEEecccccchh
Confidence 46899999998 23 466777765446688887776542 1 0122343 445688776421
Q ss_pred ccc--cCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEE
Q 044601 87 FFL--RTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVT 144 (213)
Q Consensus 87 ~~l--~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvT 144 (213)
..+ ....||.|+-+--|.- . -...+|+.+..+|+ |+|.+.|.
T Consensus 280 ~~l~~~d~sFDlVisdgsH~~------------~---d~~~aL~el~rvLK-PGGvlVi~ 323 (419)
T 3sso_A 280 DRIARRYGPFDIVIDDGSHIN------------A---HVRTSFAALFPHVR-PGGLYVIE 323 (419)
T ss_dssp HHHHHHHCCEEEEEECSCCCH------------H---HHHHHHHHHGGGEE-EEEEEEEE
T ss_pred hhhhcccCCccEEEECCcccc------------h---hHHHHHHHHHHhcC-CCeEEEEE
Confidence 001 1368999998643310 1 12468899999998 99998885
No 285
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=57.24 E-value=51 Score=27.70 Aligned_cols=100 Identities=13% Similarity=0.224 Sum_probs=56.2
Q ss_pred CCCCCCeEEEEecCChh-HHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCC-cc
Q 044601 11 HYSSKQRILLVGEGDFS-FSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQH-FF 88 (213)
Q Consensus 11 ~y~~~~~ILlVGEGnFS-FS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~-~~ 88 (213)
.-.++++||+.|=|.-. ++..+|++.| ...+++++-.. +.++.++++|+...++.+-....+. ..
T Consensus 157 ~~~~g~~VlV~GaG~vG~~aiq~ak~~G-~~~vi~~~~~~------------~k~~~a~~lGa~~~i~~~~~~~~~~~~~ 223 (346)
T 4a2c_A 157 QGCENKNVIIIGAGTIGLLAIQCAVALG-AKSVTAIDISS------------EKLALAKSFGAMQTFNSSEMSAPQMQSV 223 (346)
T ss_dssp TCCTTSEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCH------------HHHHHHHHTTCSEEEETTTSCHHHHHHH
T ss_pred ccCCCCEEEEECCCCcchHHHHHHHHcC-CcEEEEEechH------------HHHHHHHHcCCeEEEeCCCCCHHHHHHh
Confidence 34578999999988765 4444577776 44566654431 2356677888866544332222111 11
Q ss_pred cc-CCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEE
Q 044601 89 LR-THKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVT 144 (213)
Q Consensus 89 l~-~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvT 144 (213)
+. ...+|.| ++. +|.. ..+..|..+|+ ++|.+.+.
T Consensus 224 ~~~~~g~d~v-~d~--~G~~-----------------~~~~~~~~~l~-~~G~~v~~ 259 (346)
T 4a2c_A 224 LRELRFNQLI-LET--AGVP-----------------QTVELAVEIAG-PHAQLALV 259 (346)
T ss_dssp HGGGCSSEEE-EEC--SCSH-----------------HHHHHHHHHCC-TTCEEEEC
T ss_pred hcccCCcccc-ccc--cccc-----------------chhhhhhheec-CCeEEEEE
Confidence 12 2335544 443 3421 23556778887 88887654
No 286
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=56.91 E-value=72 Score=26.09 Aligned_cols=87 Identities=17% Similarity=0.140 Sum_probs=46.3
Q ss_pred cccccCCCCCCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEE-EEeeecccc
Q 044601 6 EKWSNHYSSKQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLV-FYGVDAMQM 83 (213)
Q Consensus 6 ~k~~~~y~~~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V-~~gVDAt~L 83 (213)
+.+..+-.+++++|+.|=+.+ .-+++++.+ ..+.+|++++.+.+ .....+++|++.|..+ .+.+|.++.
T Consensus 15 ~~~~~~m~~~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~--------~~~~~~~~l~~~~~~~~~~~~Dv~d~ 85 (279)
T 3sju_A 15 VPRGSHMSRPQTAFVTGVSSG-IGLAVARTLAARGIAVYGCARDAK--------NVSAAVDGLRAAGHDVDGSSCDVTST 85 (279)
T ss_dssp ----------CEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESCHH--------HHHHHHHHHHTTTCCEEEEECCTTCH
T ss_pred CCCcccccCCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEeCCHH--------HHHHHHHHHHhcCCcEEEEECCCCCH
Confidence 334445556788999996542 334444433 12578888887632 1334566777776544 567788876
Q ss_pred CCCccc------cCCcccEEEEcC
Q 044601 84 SQHFFL------RTHKFDRVIYNF 101 (213)
Q Consensus 84 ~~~~~l------~~~~FDrIiFNF 101 (213)
.....+ +..+.|.+|-|=
T Consensus 86 ~~v~~~~~~~~~~~g~id~lv~nA 109 (279)
T 3sju_A 86 DEVHAAVAAAVERFGPIGILVNSA 109 (279)
T ss_dssp HHHHHHHHHHHHHHCSCCEEEECC
T ss_pred HHHHHHHHHHHHHcCCCcEEEECC
Confidence 543221 124689888774
No 287
>3bed_A PTS system, IIA component; mannose/sorbose, phosphotransferase system, structural genom APC28805, PSI-2, protein structure initiative; HET: MSE MLY; 1.45A {Enterococcus faecalis} SCOP: c.54.1.1
Probab=56.74 E-value=22 Score=26.92 Aligned_cols=58 Identities=12% Similarity=0.162 Sum_probs=38.7
Q ss_pred CeEEEEecCChhHHHHHHHH----hCCCCeEEEeccC---CHHHHHhhcchHHHHHHHHHhCCCEEEEee
Q 044601 16 QRILLVGEGDFSFSLCLARE----FGFAHNMVATCLD---TQETIANKYSNAVDNVRELEERGCLVFYGV 78 (213)
Q Consensus 16 ~~ILlVGEGnFSFS~aLa~~----~~~~~~l~ATs~d---s~~~l~~kY~~a~~ni~~L~~~g~~V~~gV 78 (213)
-.|++|+=|+ ||.+|+.. +|...++.|-++. +.+++.++.. +-++.+...|+.|+.++
T Consensus 6 i~iiivsHG~--~A~gl~~~~~~i~G~~~~i~ai~~~~~~~~~~~~~~i~---~~i~~~~~~gvliLtDl 70 (142)
T 3bed_A 6 PKLILMSHGR--MAEETLASTQMIVGELADAAIVSMTAEDGLSGTQAKLA---AILKEAGNVPTLVLADL 70 (142)
T ss_dssp SEEEEEEETT--HHHHHHHHHHHHHCTTCCCEEEEECTTTHHHHHHHHHH---HHHHHHCSCCEEEEESS
T ss_pred ccEEEEcChH--HHHHHHHHHHHHcCCCCCEEEEEecCCCCHHHHHHHHH---HHHHhcCCCCEEEEEEC
Confidence 4799999996 88888764 3655677777665 3456666653 44566654577776544
No 288
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=56.06 E-value=86 Score=25.93 Aligned_cols=121 Identities=17% Similarity=0.137 Sum_probs=61.1
Q ss_pred CCCeEEEEecCCh-hHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHH-hCCCEEEEeeeccccCCCccc-
Q 044601 14 SKQRILLVGEGDF-SFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELE-ERGCLVFYGVDAMQMSQHFFL- 89 (213)
Q Consensus 14 ~~~~ILlVGEGnF-SFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~-~~g~~V~~gVDAt~L~~~~~l- 89 (213)
+++++|+.|=+.+ -.-+++|+.+ ..+.+|+++..+. .. .+.++++. +.|..+.+.+|.++......+
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~--~~-------~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~ 100 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGD--AL-------KKRVEPLAEELGAFVAGHCDVADAASIDAVF 100 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSH--HH-------HHHHHHHHHHHTCEEEEECCTTCHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCH--HH-------HHHHHHHHHhcCCceEEECCCCCHHHHHHHH
Confidence 4678999997543 1333333332 1256788887662 11 11223332 234456778899887654322
Q ss_pred -----cCCcccEEEEcCCcCC----Ccc-----cccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEE
Q 044601 90 -----RTHKFDRVIYNFPHVG----FIF-----RENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVT 144 (213)
Q Consensus 90 -----~~~~FDrIiFNFPH~G----~~~-----~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvT 144 (213)
...+.|.+|.|==-.. ... .++-.+.+..|-.-.....+.+.+.+. ..|.|...
T Consensus 101 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~-~~g~Iv~i 168 (293)
T 3grk_A 101 ETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMA-DGGSILTL 168 (293)
T ss_dssp HHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTT-TCEEEEEE
T ss_pred HHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCEEEEE
Confidence 1257899888732211 000 111123344443333344455566665 57775543
No 289
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=55.21 E-value=71 Score=26.15 Aligned_cols=81 Identities=10% Similarity=0.076 Sum_probs=51.8
Q ss_pred CCcccEEEEcCCcCCC-cccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCCCCcccHHhHHHHhCcEEEE
Q 044601 91 THKFDRVIYNFPHVGF-IFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDPYNKWELVKKAEKIGLTLQE 169 (213)
Q Consensus 91 ~~~FDrIiFNFPH~G~-~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py~~W~i~~lA~~~gl~l~~ 169 (213)
..+||.|+.+=|---. ...+ .......-..++...+..+..+|+ ++|.|.|.+.+ +..-.+..+..+.|+.+..
T Consensus 21 ~~~vdlI~~DPPY~~~~~~~d-~~~~~~~y~~~~~~~l~~~~~~Lk-~~g~i~v~~~d---~~~~~~~~~~~~~gf~~~~ 95 (260)
T 1g60_A 21 NKSVQLAVIDPPYNLSKADWD-SFDSHNEFLAFTYRWIDKVLDKLD-KDGSLYIFNTP---FNCAFICQYLVSKGMIFQN 95 (260)
T ss_dssp TTCEEEEEECCCCSSCSSGGG-CCSSHHHHHHHHHHHHHHHHHHEE-EEEEEEEEECH---HHHHHHHHHHHHTTCEEEE
T ss_pred ccccCEEEECCCCCCCccccc-ccCCHHHHHHHHHHHHHHHHHHhc-CCeEEEEEcCc---HHHHHHHHHHHhhccceeE
Confidence 4689999999997432 1100 000122234577888888899998 99999998732 2222334455678998888
Q ss_pred EeecCCC
Q 044601 170 VVPFCKQ 176 (213)
Q Consensus 170 ~~~F~~~ 176 (213)
.+.....
T Consensus 96 ~iiW~K~ 102 (260)
T 1g60_A 96 WITWDKR 102 (260)
T ss_dssp EEEECCC
T ss_pred EEEEEec
Confidence 7776644
No 290
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=54.14 E-value=19 Score=30.96 Aligned_cols=99 Identities=14% Similarity=0.110 Sum_probs=56.6
Q ss_pred CCCCCCeEEEEecCChh-HHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCC-cc
Q 044601 11 HYSSKQRILLVGEGDFS-FSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQH-FF 88 (213)
Q Consensus 11 ~y~~~~~ILlVGEGnFS-FS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~-~~ 88 (213)
...++++||++|-|..- ++..||++.| ...|+|+..+. +.++.++++|+...++.+...+.+. ..
T Consensus 187 ~~~~g~~VlV~GaG~vG~~a~qlak~~G-a~~Vi~~~~~~------------~~~~~a~~lGa~~vi~~~~~~~~~~~~~ 253 (371)
T 1f8f_A 187 KVTPASSFVTWGAGAVGLSALLAAKVCG-ASIIIAVDIVE------------SRLELAKQLGATHVINSKTQDPVAAIKE 253 (371)
T ss_dssp CCCTTCEEEEESCSHHHHHHHHHHHHHT-CSEEEEEESCH------------HHHHHHHHHTCSEEEETTTSCHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEECCCH------------HHHHHHHHcCCCEEecCCccCHHHHHHH
Confidence 45678999999987643 5566688876 44688886542 2244556678755443322221111 01
Q ss_pred ccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEE
Q 044601 89 LRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHV 143 (213)
Q Consensus 89 l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihv 143 (213)
+....+|.||-. +|.. ..+..+..+|+ ++|+|.+
T Consensus 254 ~~~gg~D~vid~---~g~~-----------------~~~~~~~~~l~-~~G~iv~ 287 (371)
T 1f8f_A 254 ITDGGVNFALES---TGSP-----------------EILKQGVDALG-ILGKIAV 287 (371)
T ss_dssp HTTSCEEEEEEC---SCCH-----------------HHHHHHHHTEE-EEEEEEE
T ss_pred hcCCCCcEEEEC---CCCH-----------------HHHHHHHHHHh-cCCEEEE
Confidence 112368877642 3321 23566778887 8888654
No 291
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=53.16 E-value=7.4 Score=34.42 Aligned_cols=43 Identities=9% Similarity=0.085 Sum_probs=28.0
Q ss_pred HHHHHHhCCCEEEEeeeccccCCCcc-c------------cCCcccEEEEcCCcCC
Q 044601 63 NVRELEERGCLVFYGVDAMQMSQHFF-L------------RTHKFDRVIYNFPHVG 105 (213)
Q Consensus 63 ni~~L~~~g~~V~~gVDAt~L~~~~~-l------------~~~~FDrIiFNFPH~G 105 (213)
-.+.|++.|++++.+..++.+..... + ....+|.|++--|..|
T Consensus 214 ~~~~l~~~gI~~~~~~~v~~v~~~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~~~ 269 (437)
T 3sx6_A 214 LTKGLKEEGIEAYTNCKVTKVEDNKMYVTQVDEKGETIKEMVLPVKFGMMIPAFKG 269 (437)
T ss_dssp HHHHHHHTTCEEECSEEEEEEETTEEEEEEECTTSCEEEEEEEECSEEEEECCEEC
T ss_pred HHHHHHHCCCEEEcCCEEEEEECCeEEEEecccCCccccceEEEEeEEEEcCCCcC
Confidence 34788999999998766665543210 0 1235899998666555
No 292
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=52.88 E-value=37 Score=29.16 Aligned_cols=97 Identities=18% Similarity=0.187 Sum_probs=57.6
Q ss_pred CCCCCCeEEEEe-cCChhHHH-HHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCc-
Q 044601 11 HYSSKQRILLVG-EGDFSFSL-CLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHF- 87 (213)
Q Consensus 11 ~y~~~~~ILlVG-EGnFSFS~-aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~- 87 (213)
...++++||+.| -|..--.. .||+..| .+|++|+... +.++.++++|+...++.+...+.+..
T Consensus 160 ~~~~g~~VlV~Ga~G~iG~~~~q~a~~~G--a~Vi~~~~~~------------~~~~~~~~~Ga~~~~~~~~~~~~~~~~ 225 (362)
T 2c0c_A 160 GLSEGKKVLVTAAAGGTGQFAMQLSKKAK--CHVIGTCSSD------------EKSAFLKSLGCDRPINYKTEPVGTVLK 225 (362)
T ss_dssp CCCTTCEEEETTTTBTTHHHHHHHHHHTT--CEEEEEESSH------------HHHHHHHHTTCSEEEETTTSCHHHHHH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHhCC--CEEEEEECCH------------HHHHHHHHcCCcEEEecCChhHHHHHH
Confidence 456789999999 68775544 4466664 4899987642 22455667888655443322221111
Q ss_pred cccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEE
Q 044601 88 FLRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHV 143 (213)
Q Consensus 88 ~l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihv 143 (213)
.+....+|.||-+ +|. ..+..+.++|+ ++|+|.+
T Consensus 226 ~~~~~g~D~vid~---~g~------------------~~~~~~~~~l~-~~G~iv~ 259 (362)
T 2c0c_A 226 QEYPEGVDVVYES---VGG------------------AMFDLAVDALA-TKGRLIV 259 (362)
T ss_dssp HHCTTCEEEEEEC---SCT------------------HHHHHHHHHEE-EEEEEEE
T ss_pred HhcCCCCCEEEEC---CCH------------------HHHHHHHHHHh-cCCEEEE
Confidence 1113468988755 342 12456677887 8887644
No 293
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=52.68 E-value=47 Score=27.71 Aligned_cols=78 Identities=21% Similarity=0.222 Sum_probs=49.6
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHh-CCCEEEEeeeccccCCCccccC
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEE-RGCLVFYGVDAMQMSQHFFLRT 91 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~-~g~~V~~gVDAt~L~~~~~l~~ 91 (213)
.++++||=||=|.=.++..|++.. ..|+|.-.|. .+.+ .+..++..... ..+++ ..-|+.++. .
T Consensus 27 ~~~~~VLDiG~G~G~lt~~L~~~~---~~v~~vD~~~--~~~~---~a~~~~~~~~~~~~v~~-~~~D~~~~~--~---- 91 (285)
T 1zq9_A 27 RPTDVVLEVGPGTGNMTVKLLEKA---KKVVACELDP--RLVA---ELHKRVQGTPVASKLQV-LVGDVLKTD--L---- 91 (285)
T ss_dssp CTTCEEEEECCTTSTTHHHHHHHS---SEEEEEESCH--HHHH---HHHHHHTTSTTGGGEEE-EESCTTTSC--C----
T ss_pred CCCCEEEEEcCcccHHHHHHHhhC---CEEEEEECCH--HHHH---HHHHHHHhcCCCCceEE-EEcceeccc--c----
Confidence 567899999999888999998872 4788777663 2222 13333321100 12344 445887753 1
Q ss_pred CcccEEEEcCCcCC
Q 044601 92 HKFDRVIYNFPHVG 105 (213)
Q Consensus 92 ~~FDrIiFNFPH~G 105 (213)
..||.|+-|.|.-.
T Consensus 92 ~~fD~vv~nlpy~~ 105 (285)
T 1zq9_A 92 PFFDTCVANLPYQI 105 (285)
T ss_dssp CCCSEEEEECCGGG
T ss_pred hhhcEEEEecCccc
Confidence 26999999999865
No 294
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=52.52 E-value=47 Score=27.57 Aligned_cols=79 Identities=16% Similarity=0.265 Sum_probs=49.9
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCC
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTH 92 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~ 92 (213)
.++++||=||=|.=.++..|++. +..|+|.-.|.. +.+ .+.+++.. ..++++ ..-|+.++.-.......
T Consensus 28 ~~~~~VLEIG~G~G~lt~~La~~---~~~V~avEid~~--~~~---~~~~~~~~--~~~v~~-i~~D~~~~~~~~~~~~~ 96 (255)
T 3tqs_A 28 QKTDTLVEIGPGRGALTDYLLTE---CDNLALVEIDRD--LVA---FLQKKYNQ--QKNITI-YQNDALQFDFSSVKTDK 96 (255)
T ss_dssp CTTCEEEEECCTTTTTHHHHTTT---SSEEEEEECCHH--HHH---HHHHHHTT--CTTEEE-EESCTTTCCGGGSCCSS
T ss_pred CCcCEEEEEcccccHHHHHHHHh---CCEEEEEECCHH--HHH---HHHHHHhh--CCCcEE-EEcchHhCCHHHhccCC
Confidence 45789999998888888888876 257888877732 222 13333332 123444 45588887522111245
Q ss_pred cccEEEEcCCc
Q 044601 93 KFDRVIYNFPH 103 (213)
Q Consensus 93 ~FDrIiFNFPH 103 (213)
.|| ||-|.|.
T Consensus 97 ~~~-vv~NlPY 106 (255)
T 3tqs_A 97 PLR-VVGNLPY 106 (255)
T ss_dssp CEE-EEEECCH
T ss_pred CeE-EEecCCc
Confidence 688 9999996
No 295
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=52.01 E-value=61 Score=23.85 Aligned_cols=77 Identities=9% Similarity=0.072 Sum_probs=44.4
Q ss_pred CCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCCc
Q 044601 15 KQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTHK 93 (213)
Q Consensus 15 ~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~~ 93 (213)
.++||++|=|.+.-.++ +.+ ..+..+++...+.++. .+.+......|+.+++| |+++........-..
T Consensus 3 ~~~vlI~G~G~vG~~la--~~L~~~g~~V~vid~~~~~~--------~~~~~~~~~~~~~~i~g-d~~~~~~l~~a~i~~ 71 (153)
T 1id1_A 3 KDHFIVCGHSILAINTI--LQLNQRGQNVTVISNLPEDD--------IKQLEQRLGDNADVIPG-DSNDSSVLKKAGIDR 71 (153)
T ss_dssp CSCEEEECCSHHHHHHH--HHHHHTTCCEEEEECCCHHH--------HHHHHHHHCTTCEEEES-CTTSHHHHHHHTTTT
T ss_pred CCcEEEECCCHHHHHHH--HHHHHCCCCEEEEECCChHH--------HHHHHHhhcCCCeEEEc-CCCCHHHHHHcChhh
Confidence 56899999987765544 332 1246777776654321 12233334458888765 777644222112346
Q ss_pred ccEEEEcCC
Q 044601 94 FDRVIYNFP 102 (213)
Q Consensus 94 FDrIiFNFP 102 (213)
.|.||.--|
T Consensus 72 ad~vi~~~~ 80 (153)
T 1id1_A 72 CRAILALSD 80 (153)
T ss_dssp CSEEEECSS
T ss_pred CCEEEEecC
Confidence 888887655
No 296
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=50.82 E-value=25 Score=29.88 Aligned_cols=99 Identities=19% Similarity=0.218 Sum_probs=59.1
Q ss_pred CCCCCCeEEEEecCChh-HHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCC-cc
Q 044601 11 HYSSKQRILLVGEGDFS-FSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQH-FF 88 (213)
Q Consensus 11 ~y~~~~~ILlVGEGnFS-FS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~-~~ 88 (213)
.-.++++||++|-|... ++..||++.+ +..|+||.... ++++.++++|+.....-+. .+.+. ..
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g-~~~Vi~~~~~~------------~~~~~~~~lGa~~~i~~~~-~~~~~v~~ 233 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVS-AARVIAVDLDD------------DRLALAREVGADAAVKSGA-GAADAIRE 233 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHC-CCEEEEEESCH------------HHHHHHHHTTCSEEEECST-THHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCH------------HHHHHHHHcCCCEEEcCCC-cHHHHHHH
Confidence 45678999999988654 4455577775 57899986542 3456677888865543322 11110 11
Q ss_pred c-cCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEE
Q 044601 89 L-RTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVT 144 (213)
Q Consensus 89 l-~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvT 144 (213)
+ ....+|.|+= .+|.. ..+..+..+|+ ++|++.+.
T Consensus 234 ~t~g~g~d~v~d---~~G~~-----------------~~~~~~~~~l~-~~G~iv~~ 269 (345)
T 3jv7_A 234 LTGGQGATAVFD---FVGAQ-----------------STIDTAQQVVA-VDGHISVV 269 (345)
T ss_dssp HHGGGCEEEEEE---SSCCH-----------------HHHHHHHHHEE-EEEEEEEC
T ss_pred HhCCCCCeEEEE---CCCCH-----------------HHHHHHHHHHh-cCCEEEEE
Confidence 1 1346887654 24431 24666778887 88876543
No 297
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=50.68 E-value=39 Score=28.40 Aligned_cols=99 Identities=17% Similarity=0.118 Sum_probs=57.7
Q ss_pred cCCCCCCeEEEEec-CChhHHHH-HHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHH-HhCCCEEEEeeeccccCCC
Q 044601 10 NHYSSKQRILLVGE-GDFSFSLC-LAREFGFAHNMVATCLDTQETIANKYSNAVDNVREL-EERGCLVFYGVDAMQMSQH 86 (213)
Q Consensus 10 ~~y~~~~~ILlVGE-GnFSFS~a-La~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L-~~~g~~V~~gVDAt~L~~~ 86 (213)
....++++||+.|= |..--+.+ ++++.| .+|++|+.+. +.++.+ +++|+...++.+...+.+.
T Consensus 145 ~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G--a~Vi~~~~~~------------~~~~~~~~~~g~~~~~~~~~~~~~~~ 210 (336)
T 4b7c_A 145 GQPKNGETVVISGAAGAVGSVAGQIARLKG--CRVVGIAGGA------------EKCRFLVEELGFDGAIDYKNEDLAAG 210 (336)
T ss_dssp TCCCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESSH------------HHHHHHHHTTCCSEEEETTTSCHHHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHCC--CEEEEEeCCH------------HHHHHHHHHcCCCEEEECCCHHHHHH
Confidence 34567899999998 76654433 456654 5899987652 224556 6778865543332222111
Q ss_pred -ccccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEE
Q 044601 87 -FFLRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVT 144 (213)
Q Consensus 87 -~~l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvT 144 (213)
..+....+|.||=+ +|. ..+..+..+|+ ++|+|.+.
T Consensus 211 ~~~~~~~~~d~vi~~---~g~------------------~~~~~~~~~l~-~~G~iv~~ 247 (336)
T 4b7c_A 211 LKRECPKGIDVFFDN---VGG------------------EILDTVLTRIA-FKARIVLC 247 (336)
T ss_dssp HHHHCTTCEEEEEES---SCH------------------HHHHHHHTTEE-EEEEEEEC
T ss_pred HHHhcCCCceEEEEC---CCc------------------chHHHHHHHHh-hCCEEEEE
Confidence 11123568876542 342 13566778887 88987653
No 298
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=50.36 E-value=47 Score=28.14 Aligned_cols=96 Identities=13% Similarity=0.140 Sum_probs=54.3
Q ss_pred CCCeEEEEecCChhH-HHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCc-cc-c
Q 044601 14 SKQRILLVGEGDFSF-SLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHF-FL-R 90 (213)
Q Consensus 14 ~~~~ILlVGEGnFSF-S~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~-~l-~ 90 (213)
++++||++|-|..-- +..||++.| ...|+|++.+. +.++.++++|+....+.+...+.+.. .+ .
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~G-a~~Vi~~~~~~------------~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~ 233 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASG-AYPVIVSEPSD------------FRRELAKKVGADYVINPFEEDVVKEVMDITD 233 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTT-CCSEEEECSCH------------HHHHHHHHHTCSEEECTTTSCHHHHHHHHTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCH------------HHHHHHHHhCCCEEECCCCcCHHHHHHHHcC
Confidence 789999999986543 344466665 33788887652 12445566787544433222221111 01 1
Q ss_pred CCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEE
Q 044601 91 THKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHV 143 (213)
Q Consensus 91 ~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihv 143 (213)
...+|.||-. +|.. ..+..+.++|+ ++|+|.+
T Consensus 234 g~g~D~vid~---~g~~-----------------~~~~~~~~~l~-~~G~iv~ 265 (348)
T 2d8a_A 234 GNGVDVFLEF---SGAP-----------------KALEQGLQAVT-PAGRVSL 265 (348)
T ss_dssp TSCEEEEEEC---SCCH-----------------HHHHHHHHHEE-EEEEEEE
T ss_pred CCCCCEEEEC---CCCH-----------------HHHHHHHHHHh-cCCEEEE
Confidence 3468888754 2320 23456677887 8887644
No 299
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=50.24 E-value=24 Score=28.22 Aligned_cols=79 Identities=13% Similarity=0.147 Sum_probs=46.3
Q ss_pred CCCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEE-EEeeeccccCCCccc--
Q 044601 14 SKQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLV-FYGVDAMQMSQHFFL-- 89 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V-~~gVDAt~L~~~~~l-- 89 (213)
+++++|+.|=+. -.-.+|++++ ..+.+|+++..+.+ . .....++|++.+..+ .+.+|.++......+
T Consensus 8 ~~k~vlITGas~-giG~~~a~~l~~~G~~V~~~~r~~~-~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 78 (253)
T 3qiv_A 8 ENKVGIVTGSGG-GIGQAYAEALAREGAAVVVADINAE-A-------AEAVAKQIVADGGTAISVAVDVSDPESAKAMAD 78 (253)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESCHH-H-------HHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHH
T ss_pred CCCEEEEECCCC-hHHHHHHHHHHHCCCEEEEEcCCHH-H-------HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHH
Confidence 467889998543 2334444433 12568888877532 1 233456666666544 567888886643221
Q ss_pred ----cCCcccEEEEcC
Q 044601 90 ----RTHKFDRVIYNF 101 (213)
Q Consensus 90 ----~~~~FDrIiFNF 101 (213)
.....|.||.|=
T Consensus 79 ~~~~~~g~id~li~~A 94 (253)
T 3qiv_A 79 RTLAEFGGIDYLVNNA 94 (253)
T ss_dssp HHHHHHSCCCEEEECC
T ss_pred HHHHHcCCCCEEEECC
Confidence 124789888774
No 300
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=49.80 E-value=29 Score=29.61 Aligned_cols=100 Identities=15% Similarity=0.150 Sum_probs=58.0
Q ss_pred CCCCCCeEEEEecCChh-HHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCc-c
Q 044601 11 HYSSKQRILLVGEGDFS-FSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHF-F 88 (213)
Q Consensus 11 ~y~~~~~ILlVGEGnFS-FS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~-~ 88 (213)
...++++||++|-|..- ++..||++.| ...|++++-+. +.++.++++|+...++.+...+.+.. .
T Consensus 163 ~~~~g~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~~~------------~~~~~~~~lGa~~vi~~~~~~~~~~v~~ 229 (352)
T 3fpc_A 163 NIKLGDTVCVIGIGPVGLMSVAGANHLG-AGRIFAVGSRK------------HCCDIALEYGATDIINYKNGDIVEQILK 229 (352)
T ss_dssp TCCTTCCEEEECCSHHHHHHHHHHHTTT-CSSEEEECCCH------------HHHHHHHHHTCCEEECGGGSCHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CcEEEEECCCH------------HHHHHHHHhCCceEEcCCCcCHHHHHHH
Confidence 45678999999988654 3444566665 44788876542 23556677788655544333322211 1
Q ss_pred -ccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEE
Q 044601 89 -LRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVT 144 (213)
Q Consensus 89 -l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvT 144 (213)
.....+|.|+ + .+|.. ..+..+..+|+ ++|++.+.
T Consensus 230 ~t~g~g~D~v~-d--~~g~~-----------------~~~~~~~~~l~-~~G~~v~~ 265 (352)
T 3fpc_A 230 ATDGKGVDKVV-I--AGGDV-----------------HTFAQAVKMIK-PGSDIGNV 265 (352)
T ss_dssp HTTTCCEEEEE-E--CSSCT-----------------THHHHHHHHEE-EEEEEEEC
T ss_pred HcCCCCCCEEE-E--CCCCh-----------------HHHHHHHHHHh-cCCEEEEe
Confidence 1234688776 3 23321 23556677887 88876543
No 301
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=49.57 E-value=1e+02 Score=25.37 Aligned_cols=124 Identities=15% Similarity=0.012 Sum_probs=62.5
Q ss_pred CCCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEE-EEeeeccccCCCccc--
Q 044601 14 SKQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLV-FYGVDAMQMSQHFFL-- 89 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V-~~gVDAt~L~~~~~l-- 89 (213)
+++++|+.|=+.+ .-+++++.+ ..+.+|+.+..+..++- .....+.+++.|..+ .+.+|.++......+
T Consensus 48 ~~k~vlVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~ 120 (294)
T 3r3s_A 48 KDRKALVTGGDSG-IGRAAAIAYAREGADVAINYLPAEEED------AQQVKALIEECGRKAVLLPGDLSDESFARSLVH 120 (294)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEECCGGGHHH------HHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCcchhH------HHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHH
Confidence 3578999996542 233444433 12568888877633221 122234455666544 567888876543221
Q ss_pred ----cCCcccEEEEcCCcCCC-ccccc-----chHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEe
Q 044601 90 ----RTHKFDRVIYNFPHVGF-IFREN-----SYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTH 145 (213)
Q Consensus 90 ----~~~~FDrIiFNFPH~G~-~~~e~-----~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl 145 (213)
.....|.+|.|=-.... ...++ -.+.+..|-.=.....+.+.+.+. .+|.|..+.
T Consensus 121 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~-~~g~Iv~is 185 (294)
T 3r3s_A 121 KAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLP-KGASIITTS 185 (294)
T ss_dssp HHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCC-TTCEEEEEC
T ss_pred HHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhh-cCCEEEEEC
Confidence 12468988887432221 11111 123333342223334444556665 678865553
No 302
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=48.73 E-value=49 Score=27.86 Aligned_cols=45 Identities=29% Similarity=0.358 Sum_probs=31.4
Q ss_pred CcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCC
Q 044601 92 HKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGD 149 (213)
Q Consensus 92 ~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~ 149 (213)
..||.|+-.. + .+..........+......|+ |+|.+.+.+.+.-
T Consensus 212 ~~fDlI~crn--v----------liyf~~~~~~~vl~~~~~~L~-pgG~L~lg~sE~~ 256 (274)
T 1af7_A 212 GPFDAIFCRN--V----------MIYFDKTTQEDILRRFVPLLK-PDGLLFAGHSENF 256 (274)
T ss_dssp CCEEEEEECS--S----------GGGSCHHHHHHHHHHHGGGEE-EEEEEEECTTCCC
T ss_pred CCeeEEEECC--c----------hHhCCHHHHHHHHHHHHHHhC-CCcEEEEEecccc
Confidence 5799999832 1 123344555677788889998 9999988776543
No 303
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=48.56 E-value=22 Score=28.91 Aligned_cols=78 Identities=17% Similarity=0.149 Sum_probs=47.1
Q ss_pred CCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEE-EEeeeccccCCCccc---
Q 044601 15 KQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLV-FYGVDAMQMSQHFFL--- 89 (213)
Q Consensus 15 ~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V-~~gVDAt~L~~~~~l--- 89 (213)
+++||+.|=+.+ .-.++++.+ ..+.+|++++.+.+ . .....++|++.|..+ .+.+|.++......+
T Consensus 29 ~k~vlITGas~g-IG~~la~~l~~~G~~V~~~~r~~~-~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~ 99 (262)
T 3rkr_A 29 GQVAVVTGASRG-IGAAIARKLGSLGARVVLTARDVE-K-------LRAVEREIVAAGGEAESHACDLSHSDAIAAFATG 99 (262)
T ss_dssp TCEEEESSTTSH-HHHHHHHHHHHTTCEEEEEESCHH-H-------HHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEECCHH-H-------HHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHH
Confidence 578899985543 344444443 23578998887632 1 233456677766654 667888887643221
Q ss_pred ---cCCcccEEEEcC
Q 044601 90 ---RTHKFDRVIYNF 101 (213)
Q Consensus 90 ---~~~~FDrIiFNF 101 (213)
...+.|.||.|=
T Consensus 100 ~~~~~g~id~lv~~A 114 (262)
T 3rkr_A 100 VLAAHGRCDVLVNNA 114 (262)
T ss_dssp HHHHHSCCSEEEECC
T ss_pred HHHhcCCCCEEEECC
Confidence 124689888773
No 304
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=48.31 E-value=1.9e+02 Score=27.63 Aligned_cols=108 Identities=16% Similarity=0.065 Sum_probs=57.5
Q ss_pred CeEEEeccCCHHHHHhhcchHHHHHHHHHhCCC---EEEEeeeccccCCCccccCCcccEEEEcCCcCCCcccccchHHH
Q 044601 40 HNMVATCLDTQETIANKYSNAVDNVRELEERGC---LVFYGVDAMQMSQHFFLRTHKFDRVIYNFPHVGFIFRENSYCQI 116 (213)
Q Consensus 40 ~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~---~V~~gVDAt~L~~~~~l~~~~FDrIiFNFPH~G~~~~e~~~~~i 116 (213)
..|++.-.|. +.+.. |..|++ ..|+ .-+..-|+.++.... ....||.||.|=|--...+.+
T Consensus 257 ~~i~G~Did~-~av~~----A~~N~~---~agv~~~i~~~~~D~~~~~~~~--~~~~~d~Iv~NPPYG~Rlg~~------ 320 (703)
T 3v97_A 257 SHFYGSDSDA-RVIQR----ARTNAR---LAGIGELITFEVKDVAQLTNPL--PKGPYGTVLSNPPYGERLDSE------ 320 (703)
T ss_dssp CCEEEEESCH-HHHHH----HHHHHH---HTTCGGGEEEEECCGGGCCCSC--TTCCCCEEEECCCCCC---CC------
T ss_pred ccEEEEECCH-HHHHH----HHHHHH---HcCCCCceEEEECChhhCcccc--ccCCCCEEEeCCCccccccch------
Confidence 4566666653 22222 455654 3454 345667888765322 123799999998862211111
Q ss_pred HhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCCCCcccHHhHHHHhCcEEEEEeecC
Q 044601 117 QLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDPYNKWELVKKAEKIGLTLQEVVPFC 174 (213)
Q Consensus 117 ~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py~~W~i~~lA~~~gl~l~~~~~F~ 174 (213)
.....|.+.+-+..+.++ ++|++.|-..+. .+.+..|+...++.++.
T Consensus 321 ~~l~~ly~~l~~~lk~~~--~g~~~~ilt~~~---------~l~~~~glk~~k~~~l~ 367 (703)
T 3v97_A 321 PALIALHSLLGRIMKNQF--GGWNLSLFSASP---------DLLSCLQLRADKQYKAK 367 (703)
T ss_dssp HHHHHHHHHHHHHHHHHC--TTCEEEEEESCH---------HHHHTTCCCEEEEEEEE
T ss_pred hHHHHHHHHHHHHHHhhC--CCCeEEEEeCCH---------HHHHHhCCCcccceeee
Confidence 122334444433333333 799988765432 36666777766666553
No 305
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=47.71 E-value=70 Score=32.02 Aligned_cols=160 Identities=10% Similarity=0.008 Sum_probs=79.6
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhC--CCCeEEEeccCCHHHHHhhcchHHHHHHH-HHhCCC--EEEEeeeccccCCCc
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFG--FAHNMVATCLDTQETIANKYSNAVDNVRE-LEERGC--LVFYGVDAMQMSQHF 87 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~--~~~~l~ATs~ds~~~l~~kY~~a~~ni~~-L~~~g~--~V~~gVDAt~L~~~~ 87 (213)
..+.+||=.|=|.=+|..++++.++ .+..|++.-.|....-..+ ...|+.. ....|+ ..+.+-|...+..
T Consensus 320 ~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK---~RlNL~lN~LlhGi~~~~I~~dD~L~~~~-- 394 (878)
T 3s1s_A 320 TEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLS---IRLGLLFPQLVSSNNAPTITGEDVCSLNP-- 394 (878)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHH---HHHHTTSTTTCBTTBCCEEECCCGGGCCG--
T ss_pred CCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHH---HHHHHHHhhhhcCCCcceEEecchhcccc--
Confidence 3466777433343345566666553 2457888877754211110 1222211 001122 1233333333211
Q ss_pred cccCCcccEEEEcCCcCCCcccccchHHH-Hh--------------hHHHHHHHHHHHHhhcccCCCeEEEEeccCCCCC
Q 044601 88 FLRTHKFDRVIYNFPHVGFIFRENSYCQI-QL--------------NKELVKGFLRNAKLLLKEENGEIHVTHKEGDPYN 152 (213)
Q Consensus 88 ~l~~~~FDrIiFNFPH~G~~~~e~~~~~i-~~--------------n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py~ 152 (213)
....+||.||-|=|-.+....+...... .. ...+...|++-|..+|+ ++|.+.+-+..+--+.
T Consensus 395 -~~~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLK-pGGrLAfIlP~s~Lf~ 472 (878)
T 3s1s_A 395 -EDFANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQ-DGTVISAIMPKQYLTA 472 (878)
T ss_dssp -GGGTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSC-TTCEEEEEEETHHHHC
T ss_pred -cccCCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcC-CCcEEEEEEChHHhcc
Confidence 1246799999999997643221110000 00 01356679999999998 9999888876542221
Q ss_pred c----ccHHh-HHHHhCcEEEEEeecCC-CCCCCC
Q 044601 153 K----WELVK-KAEKIGLTLQEVVPFCK-QDYPGY 181 (213)
Q Consensus 153 ~----W~i~~-lA~~~gl~l~~~~~F~~-~~yPgY 181 (213)
. =.+.+ +.. ...+...+.|.. ..|++.
T Consensus 473 sg~~~kkLRk~LLe--~~~I~aIIdLP~~~~F~~a 505 (878)
T 3s1s_A 473 QGNESKAFREFLVG--NFGLEHIFLYPREGLFEEV 505 (878)
T ss_dssp CSHHHHHHHHHHTT--TTCEEEEEECCBCCSSCSC
T ss_pred CChHHHHHHHHHHh--CCCeEEEEECCCccccCCC
Confidence 1 11111 222 344556677765 445543
No 306
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=47.32 E-value=29 Score=29.82 Aligned_cols=83 Identities=14% Similarity=0.195 Sum_probs=50.2
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCcc-ccC
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFF-LRT 91 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~-l~~ 91 (213)
.++.+||=+|=|.=.+|..|++.++ +..|+|.=.| .+.+ + .+..|++... ..++ +..-|+..|..... +..
T Consensus 25 ~~g~~vLD~g~G~G~~s~~la~~~~-~~~VigvD~d-~~al-~---~A~~~~~~~g-~~v~-~v~~d~~~l~~~l~~~g~ 96 (301)
T 1m6y_A 25 EDEKIILDCTVGEGGHSRAILEHCP-GCRIIGIDVD-SEVL-R---IAEEKLKEFS-DRVS-LFKVSYREADFLLKTLGI 96 (301)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCT-TCEEEEEESC-HHHH-H---HHHHHTGGGT-TTEE-EEECCGGGHHHHHHHTTC
T ss_pred CCCCEEEEEeCCcCHHHHHHHHHCC-CCEEEEEECC-HHHH-H---HHHHHHHhcC-CcEE-EEECCHHHHHHHHHhcCC
Confidence 3567898888777788888998874 5577666554 3322 2 2455543322 1233 44457777643211 112
Q ss_pred CcccEEEEcCCc
Q 044601 92 HKFDRVIYNFPH 103 (213)
Q Consensus 92 ~~FDrIiFNFPH 103 (213)
..||.|++|.|.
T Consensus 97 ~~~D~Vl~D~gv 108 (301)
T 1m6y_A 97 EKVDGILMDLGV 108 (301)
T ss_dssp SCEEEEEEECSC
T ss_pred CCCCEEEEcCcc
Confidence 579999999984
No 307
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=47.30 E-value=36 Score=27.01 Aligned_cols=79 Identities=13% Similarity=0.130 Sum_probs=45.9
Q ss_pred CCCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEE-EEeeeccccCCCccc--
Q 044601 14 SKQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLV-FYGVDAMQMSQHFFL-- 89 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V-~~gVDAt~L~~~~~l-- 89 (213)
++++||+.|=+.+ .-.++++.+ ..+.+|+++..+.. . .....+++++.|..+ .+.+|.++......+
T Consensus 4 ~~k~vlITGas~g-IG~~~a~~l~~~G~~v~~~~r~~~-~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 74 (247)
T 3lyl_A 4 NEKVALVTGASRG-IGFEVAHALASKGATVVGTATSQA-S-------AEKFENSMKEKGFKARGLVLNISDIESIQNFFA 74 (247)
T ss_dssp TTCEEEESSCSSH-HHHHHHHHHHHTTCEEEEEESSHH-H-------HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEeCCHH-H-------HHHHHHHHHhcCCceEEEEecCCCHHHHHHHHH
Confidence 3578899985543 233333332 12578888887632 1 233456677766544 567888876543221
Q ss_pred ----cCCcccEEEEcC
Q 044601 90 ----RTHKFDRVIYNF 101 (213)
Q Consensus 90 ----~~~~FDrIiFNF 101 (213)
...+.|.||.|=
T Consensus 75 ~~~~~~~~id~li~~A 90 (247)
T 3lyl_A 75 EIKAENLAIDILVNNA 90 (247)
T ss_dssp HHHHTTCCCSEEEECC
T ss_pred HHHHHcCCCCEEEECC
Confidence 134689888773
No 308
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=47.26 E-value=34 Score=24.25 Aligned_cols=74 Identities=18% Similarity=0.296 Sum_probs=39.7
Q ss_pred CCeEEEEecCChhHHHHHH-HHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCCc
Q 044601 15 KQRILLVGEGDFSFSLCLA-REFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTHK 93 (213)
Q Consensus 15 ~~~ILlVGEGnFSFS~aLa-~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~~ 93 (213)
.++|+++|=|.....++-. ... +..+++...+. + .++.+++.|..++. .|.++...........
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~--g~~v~~~d~~~-~-----------~~~~~~~~~~~~~~-~d~~~~~~l~~~~~~~ 70 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRM--GHEVLAVDINE-E-----------KVNAYASYATHAVI-ANATEENELLSLGIRN 70 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT--TCCCEEEESCH-H-----------HHHTTTTTCSEEEE-CCTTCHHHHHTTTGGG
T ss_pred CCcEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCH-H-----------HHHHHHHhCCEEEE-eCCCCHHHHHhcCCCC
Confidence 4679999988766554432 222 35666654431 1 23445555776543 4555432111111346
Q ss_pred ccEEEEcCCc
Q 044601 94 FDRVIYNFPH 103 (213)
Q Consensus 94 FDrIiFNFPH 103 (213)
.|.||..-|.
T Consensus 71 ~d~vi~~~~~ 80 (144)
T 2hmt_A 71 FEYVIVAIGA 80 (144)
T ss_dssp CSEEEECCCS
T ss_pred CCEEEECCCC
Confidence 8999987664
No 309
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=47.01 E-value=89 Score=24.65 Aligned_cols=79 Identities=15% Similarity=0.148 Sum_probs=45.6
Q ss_pred CCCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEE-EEeeeccccCCCccc-c
Q 044601 14 SKQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLV-FYGVDAMQMSQHFFL-R 90 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V-~~gVDAt~L~~~~~l-~ 90 (213)
++++||+.|=+.+ .-.+|++.+ ..+.+|++++.+.. . .....+.|+..|..+ .+.+|.++......+ +
T Consensus 12 ~~k~vlItGasgg-iG~~la~~l~~~G~~V~~~~r~~~-~-------~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~ 82 (260)
T 3awd_A 12 DNRVAIVTGGAQN-IGLACVTALAEAGARVIIADLDEA-M-------ATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVR 82 (260)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHH-H-------HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEeCCCch-HHHHHHHHHHHCCCEEEEEeCCHH-H-------HHHHHHHHHhcCCceEEEEecCCCHHHHHHHHH
Confidence 3578999987654 233444433 12568988887632 1 223355666666443 567888876543221 1
Q ss_pred -----CCcccEEEEcC
Q 044601 91 -----THKFDRVIYNF 101 (213)
Q Consensus 91 -----~~~FDrIiFNF 101 (213)
....|.||.|=
T Consensus 83 ~~~~~~~~id~vi~~A 98 (260)
T 3awd_A 83 SVHEQEGRVDILVACA 98 (260)
T ss_dssp HHHHHHSCCCEEEECC
T ss_pred HHHHHcCCCCEEEECC
Confidence 13689888773
No 310
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=46.78 E-value=17 Score=30.96 Aligned_cols=72 Identities=15% Similarity=0.152 Sum_probs=38.0
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhC-CCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccC
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFG-FAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRT 91 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~-~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~ 91 (213)
.+.++|+++|-|.+. ..+++.+. .+. +++...|. +.++ +++.|+.+++| |+++.+.-....-
T Consensus 113 ~~~~~viI~G~G~~g--~~l~~~L~~~g~-v~vid~~~------------~~~~-~~~~~~~~i~g-d~~~~~~L~~a~i 175 (336)
T 1lnq_A 113 AKSRHVVICGWSEST--LECLRELRGSEV-FVLAEDEN------------VRKK-VLRSGANFVHG-DPTRVSDLEKANV 175 (336)
T ss_dssp ---CEEEEESCCHHH--HHHHTTGGGSCE-EEEESCGG------------GHHH-HHHTTCEEEES-CTTSHHHHHHTCS
T ss_pred cccCCEEEECCcHHH--HHHHHHHHhCCc-EEEEeCCh------------hhhh-HHhCCcEEEEe-CCCCHHHHHhcCh
Confidence 346789999999766 55666653 233 54443332 1233 45567777766 7765442211222
Q ss_pred CcccEEEEcC
Q 044601 92 HKFDRVIYNF 101 (213)
Q Consensus 92 ~~FDrIiFNF 101 (213)
...|.||---
T Consensus 176 ~~a~~vi~~~ 185 (336)
T 1lnq_A 176 RGARAVIVDL 185 (336)
T ss_dssp TTEEEEEECC
T ss_pred hhccEEEEcC
Confidence 4456666543
No 311
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=46.17 E-value=76 Score=26.70 Aligned_cols=108 Identities=19% Similarity=0.196 Sum_probs=57.8
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCC-------EEEE-eeec-----
Q 044601 14 SKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGC-------LVFY-GVDA----- 80 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~-------~V~~-gVDA----- 80 (213)
++.+||=||=|.=..+..+++.. ...||++=+. ++.|.. |....... +. .+-| -.|+
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~--~~~v~GiD~S-~~~l~~----A~~~~~~~---~~~~~~~~~~~~f~~~d~~~d~~ 117 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGE--IALLVATDPD-ADAIAR----GNERYNKL---NSGIKTKYYKFDYIQETIRSDTF 117 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTT--CSEEEEEESC-HHHHHH----HHHHHHHH---CC----CCCEEEEEECCTTSSSH
T ss_pred CCCeEEEEecCCcHhHHHHHhcC--CCeEEEEECC-HHHHHH----HHHHHHhc---cccccccccccchhhhhcccchh
Confidence 36899999877533333444432 3467665443 333322 33332222 22 1222 2333
Q ss_pred -cccCCCccccCCcccEEEEcCC-cCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEec
Q 044601 81 -MQMSQHFFLRTHKFDRVIYNFP-HVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHK 146 (213)
Q Consensus 81 -t~L~~~~~l~~~~FDrIiFNFP-H~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~ 146 (213)
.+|.+.. ....||.|+..|- |..+. . .++ ..+++++..+|+ |+|.+.++..
T Consensus 118 ~~~l~~~~--~~~~FD~V~~~~~lhy~~~-~--------~~~---~~~l~~~~r~Lk-pGG~~i~~~~ 170 (302)
T 2vdw_A 118 VSSVREVF--YFGKFNIIDWQFAIHYSFH-P--------RHY---ATVMNNLSELTA-SGGKVLITTM 170 (302)
T ss_dssp HHHHHTTC--CSSCEEEEEEESCGGGTCS-T--------TTH---HHHHHHHHHHEE-EEEEEEEEEE
T ss_pred hhhhhccc--cCCCeeEEEECchHHHhCC-H--------HHH---HHHHHHHHHHcC-CCCEEEEEeC
Confidence 2222211 2468999998762 11111 0 121 588999999998 9999888754
No 312
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=45.95 E-value=19 Score=33.35 Aligned_cols=65 Identities=17% Similarity=0.333 Sum_probs=36.6
Q ss_pred CCCCCeEEEEecCChhHHHH-HHHHhCCCCeEEEeccCCHHHHHhhcchHHHHH-HHHHhC----CCEEEEeeeccccC
Q 044601 12 YSSKQRILLVGEGDFSFSLC-LAREFGFAHNMVATCLDTQETIANKYSNAVDNV-RELEER----GCLVFYGVDAMQMS 84 (213)
Q Consensus 12 y~~~~~ILlVGEGnFSFS~a-La~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni-~~L~~~----g~~V~~gVDAt~L~ 84 (213)
|-.++||++.||.++.++++ ++..+|-....++|...+.+ | .+-+ +.|+.. ++.|+.+.|...|.
T Consensus 357 ~l~Gkrv~i~gd~~~~~~la~~L~ElGm~vv~v~~~~~~~~-----~---~~~~~~ll~~~~~~~~~~v~~~~d~~~l~ 427 (519)
T 1qgu_B 357 WLHGKKFGLYGDPDFVMGLTRFLLELGCEPTVILSHNANKR-----W---QKAMNKMLDASPYGRDSEVFINCDLWHFR 427 (519)
T ss_dssp HHTTCEEEEESCHHHHHHHHHHHHHTTCEEEEEEETTCCHH-----H---HHHHHHHHHHSTTCTTCEEEESCCHHHHH
T ss_pred HcCCCEEEEECCchHHHHHHHHHHHCCCEEEEEEeCCCCHH-----H---HHHHHHHHHhcCCCCCCEEEECCCHHHHH
Confidence 44689999999998877755 34466633333444443322 1 1112 223332 46777777766654
No 313
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=45.82 E-value=1.2e+02 Score=24.51 Aligned_cols=124 Identities=19% Similarity=0.165 Sum_probs=64.0
Q ss_pred CCCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCE-EEEeeeccccCCCccc--
Q 044601 14 SKQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCL-VFYGVDAMQMSQHFFL-- 89 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~-V~~gVDAt~L~~~~~l-- 89 (213)
+++++|+.|=+. -.-+++++++ ..+.+|+++...+.+.+ ....++|++.|.. ..+.+|.++......+
T Consensus 17 ~~k~~lVTGas~-gIG~aia~~l~~~G~~V~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 88 (270)
T 3is3_A 17 DGKVALVTGSGR-GIGAAVAVHLGRLGAKVVVNYANSTKDA-------EKVVSEIKALGSDAIAIKADIRQVPEIVKLFD 88 (270)
T ss_dssp TTCEEEESCTTS-HHHHHHHHHHHHTTCEEEEEESSCHHHH-------HHHHHHHHHTTCCEEEEECCTTSHHHHHHHHH
T ss_pred CCCEEEEECCCc-hHHHHHHHHHHHCCCEEEEEcCCCHHHH-------HHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH
Confidence 467899998653 2334444433 13578888776655432 2335666776654 4677898886643221
Q ss_pred ----cCCcccEEEEcCCcCCCcccc-----cchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEec
Q 044601 90 ----RTHKFDRVIYNFPHVGFIFRE-----NSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHK 146 (213)
Q Consensus 90 ----~~~~FDrIiFNFPH~G~~~~e-----~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~ 146 (213)
+..+.|.+|.|=--......+ +-.+.+..|-.=.....+.+.+.+. ++|.|.....
T Consensus 89 ~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~-~~g~iv~isS 153 (270)
T 3is3_A 89 QAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLT-EGGRIVLTSS 153 (270)
T ss_dssp HHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCC-TTCEEEEECC
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHh-cCCeEEEEeC
Confidence 124678887663221111111 1123333332222233344556665 5788665543
No 314
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=45.72 E-value=76 Score=25.83 Aligned_cols=78 Identities=17% Similarity=0.171 Sum_probs=43.8
Q ss_pred CCCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCC-E-EEEeeeccccCCCccc-
Q 044601 14 SKQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEERGC-L-VFYGVDAMQMSQHFFL- 89 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~-~-V~~gVDAt~L~~~~~l- 89 (213)
++++||+.|=+.+ .-.++++.+ ..+.+|++++.+. +.+ ....+++++.|. . ..+.+|.++......+
T Consensus 27 ~~k~vlITGasgg-IG~~la~~l~~~G~~V~~~~r~~-~~~-------~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~ 97 (286)
T 1xu9_A 27 QGKKVIVTGASKG-IGREMAYHLAKMGAHVVVTARSK-ETL-------QKVVSHCLELGAASAHYIAGTMEDMTFAEQFV 97 (286)
T ss_dssp TTCEEEESSCSSH-HHHHHHHHHHHTTCEEEEEESCH-HHH-------HHHHHHHHHHTCSEEEEEECCTTCHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEECCH-HHH-------HHHHHHHHHhCCCceEEEeCCCCCHHHHHHHH
Confidence 4678999996543 233343332 1257899988763 222 122344555453 3 3567888875432211
Q ss_pred -----cCCcccEEEEc
Q 044601 90 -----RTHKFDRVIYN 100 (213)
Q Consensus 90 -----~~~~FDrIiFN 100 (213)
.....|.||.|
T Consensus 98 ~~~~~~~g~iD~li~n 113 (286)
T 1xu9_A 98 AQAGKLMGGLDMLILN 113 (286)
T ss_dssp HHHHHHHTSCSEEEEC
T ss_pred HHHHHHcCCCCEEEEC
Confidence 12468999988
No 315
>3aek_A Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_A* 3aes_A* 3aer_A* 3aet_A 3aeu_A
Probab=45.61 E-value=12 Score=33.72 Aligned_cols=37 Identities=22% Similarity=0.364 Sum_probs=24.4
Q ss_pred CCCCeEEEEecCChhHHHH--HHHHhCCCCeEEEeccCC
Q 044601 13 SSKQRILLVGEGDFSFSLC--LAREFGFAHNMVATCLDT 49 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~a--La~~~~~~~~l~ATs~ds 49 (213)
-.++|+.+.||+++.++++ |.+.+|-....++|.+-+
T Consensus 305 l~Gkrv~i~g~~~~~~~l~~~L~~elG~~vv~~~~~~~~ 343 (437)
T 3aek_A 305 LTGKSLFMFPDSQLEIPLARFLARECGMKTTEIATPFLH 343 (437)
T ss_dssp HTTCEEEECSSSSCHHHHHHHHHHTTCCEEEEEEESCCC
T ss_pred hCCCEEEEEcCchHHHHHHHHHHHHcCCEEEEEEecCCC
Confidence 3479999999999877766 335666444444454444
No 316
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=45.42 E-value=1.2e+02 Score=24.41 Aligned_cols=79 Identities=22% Similarity=0.257 Sum_probs=47.3
Q ss_pred CCCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEE-EEeeeccccCCCccc--
Q 044601 14 SKQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLV-FYGVDAMQMSQHFFL-- 89 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V-~~gVDAt~L~~~~~l-- 89 (213)
+++++|+.|=+.+ .-+++++.+ ..+.+|+++..+. +. ..+..++|++.|..+ .+.+|.++......+
T Consensus 10 ~~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~-~~-------~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 80 (264)
T 3ucx_A 10 TDKVVVISGVGPA-LGTTLARRCAEQGADLVLAARTV-ER-------LEDVAKQVTDTGRRALSVGTDITDDAQVAHLVD 80 (264)
T ss_dssp TTCEEEEESCCTT-HHHHHHHHHHHTTCEEEEEESCH-HH-------HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred CCcEEEEECCCcH-HHHHHHHHHHHCcCEEEEEeCCH-HH-------HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH
Confidence 4678999997652 233333332 1256888887753 22 233456677766544 567898887643221
Q ss_pred ----cCCcccEEEEcC
Q 044601 90 ----RTHKFDRVIYNF 101 (213)
Q Consensus 90 ----~~~~FDrIiFNF 101 (213)
...+.|.+|.|=
T Consensus 81 ~~~~~~g~id~lv~nA 96 (264)
T 3ucx_A 81 ETMKAYGRVDVVINNA 96 (264)
T ss_dssp HHHHHTSCCSEEEECC
T ss_pred HHHHHcCCCcEEEECC
Confidence 125789998884
No 317
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=45.31 E-value=31 Score=29.52 Aligned_cols=37 Identities=11% Similarity=0.277 Sum_probs=26.6
Q ss_pred CCCCCCeEEEEecCChh-HHHHHHHHhCCCCeEEEeccCC
Q 044601 11 HYSSKQRILLVGEGDFS-FSLCLAREFGFAHNMVATCLDT 49 (213)
Q Consensus 11 ~y~~~~~ILlVGEGnFS-FS~aLa~~~~~~~~l~ATs~ds 49 (213)
...++++||++|-|..- ++..||++.| ..|+||+...
T Consensus 176 ~~~~g~~VlV~GaG~vG~~~~qlak~~G--a~Vi~~~~~~ 213 (360)
T 1piw_A 176 GCGPGKKVGIVGLGGIGSMGTLISKAMG--AETYVISRSS 213 (360)
T ss_dssp TCSTTCEEEEECCSHHHHHHHHHHHHHT--CEEEEEESSS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEcCCH
Confidence 45678999999987654 4455577775 4699988653
No 318
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=44.90 E-value=1.2e+02 Score=24.45 Aligned_cols=78 Identities=14% Similarity=0.163 Sum_probs=45.9
Q ss_pred CCCeEEEEecC-----ChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCC-C-EEEEeeeccccCCC
Q 044601 14 SKQRILLVGEG-----DFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERG-C-LVFYGVDAMQMSQH 86 (213)
Q Consensus 14 ~~~~ILlVGEG-----nFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g-~-~V~~gVDAt~L~~~ 86 (213)
+++.+|+.|=+ .+..++.|+++ +.+|+.+..+.+ . .++-.+.+++.| . ...+.+|.++-.+.
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~---Ga~Vvi~~r~~~-~-------~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v 73 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQL---GAKLVFTYRKER-S-------RKELEKLLEQLNQPEAHLYQIDVQSDEEV 73 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHT---TCEEEEEESSGG-G-------HHHHHHHHGGGTCSSCEEEECCTTCHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHC---CCEEEEEECCHH-H-------HHHHHHHHHhcCCCcEEEEEccCCCHHHH
Confidence 46888999843 24455555544 578888887632 1 122234455543 2 34567898886543
Q ss_pred ccc------cCCcccEEEEcCC
Q 044601 87 FFL------RTHKFDRVIYNFP 102 (213)
Q Consensus 87 ~~l------~~~~FDrIiFNFP 102 (213)
..+ +-.+.|.+|-|--
T Consensus 74 ~~~~~~~~~~~G~iD~lvnnAg 95 (256)
T 4fs3_A 74 INGFEQIGKDVGNIDGVYHSIA 95 (256)
T ss_dssp HHHHHHHHHHHCCCSEEEECCC
T ss_pred HHHHHHHHHHhCCCCEEEeccc
Confidence 221 1367899998854
No 319
>4erc_A Dual specificity protein phosphatase 23; alpha beta, phosphatase(hydrolase), hydrolase; 1.15A {Homo sapiens} PDB: 2img_A
Probab=43.90 E-value=82 Score=22.79 Aligned_cols=75 Identities=8% Similarity=-0.024 Sum_probs=39.3
Q ss_pred HHHHHHHHhCCCEEEEeeeccccCCCccccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCe
Q 044601 61 VDNVRELEERGCLVFYGVDAMQMSQHFFLRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGE 140 (213)
Q Consensus 61 ~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ 140 (213)
.++++.|++.|++.+.++-...-.... ....+..+.+..|..+.. ....+..|+.-....+. .+|.
T Consensus 25 ~~~~~~L~~~gi~~Vi~l~~~~~~~~~--~~~~~~~~~~~~~d~~~~-----------~~~~~~~~~~~i~~~~~-~~~~ 90 (150)
T 4erc_A 25 PAHYQFLLDLGVRHLVSLTERGPPHSD--SCPGLTLHRLRIPDFCPP-----------APDQIDRFVQIVDEANA-RGEA 90 (150)
T ss_dssp HHHHHHHHHTTEEEEEECSSSCCTTGG--GCTTSEEEECCCCTTSCC-----------CHHHHHHHHHHHHHHHH-TTCE
T ss_pred HHHHHHHHHCCCCEEEEcCCCCCCccc--ccCCceEEEEecCCCCCC-----------CHHHHHHHHHHHHHHHH-CCCC
Confidence 467899999999888776654322211 122344444444433321 12234455544455555 5666
Q ss_pred EEEEeccCC
Q 044601 141 IHVTHKEGD 149 (213)
Q Consensus 141 ihvTl~~~~ 149 (213)
|.|-=..|.
T Consensus 91 vlVHC~~G~ 99 (150)
T 4erc_A 91 VGVHCALGF 99 (150)
T ss_dssp EEEECSSSS
T ss_pred EEEECCCCC
Confidence 655444453
No 320
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=43.89 E-value=42 Score=28.75 Aligned_cols=37 Identities=14% Similarity=0.245 Sum_probs=26.5
Q ss_pred cCCCCCCeEEEEecCChh-HHHHHHHHh-CCCCeEEEeccC
Q 044601 10 NHYSSKQRILLVGEGDFS-FSLCLAREF-GFAHNMVATCLD 48 (213)
Q Consensus 10 ~~y~~~~~ILlVGEGnFS-FS~aLa~~~-~~~~~l~ATs~d 48 (213)
....++++||++|-|..- ++..||++. | ..|+||+..
T Consensus 182 ~~~~~g~~VlV~GaG~vG~~avqlak~~~G--a~Vi~~~~~ 220 (359)
T 1h2b_A 182 RTLYPGAYVAIVGVGGLGHIAVQLLKVMTP--ATVIALDVK 220 (359)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHHCC--CEEEEEESS
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCC--CeEEEEeCC
Confidence 345678999999998653 345557777 5 479998754
No 321
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=43.85 E-value=38 Score=28.26 Aligned_cols=79 Identities=19% Similarity=0.159 Sum_probs=47.8
Q ss_pred CCCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEE-EEeeeccccCCCcccc-
Q 044601 14 SKQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLV-FYGVDAMQMSQHFFLR- 90 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V-~~gVDAt~L~~~~~l~- 90 (213)
++++||+.|=+.+ .-+++++.+ ..+.+|++++.+.. . .....++|++.|..+ .+.+|.++......+-
T Consensus 30 ~gk~vlVTGas~g-IG~~la~~l~~~G~~V~~~~r~~~-~-------~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~ 100 (301)
T 3tjr_A 30 DGRAAVVTGGASG-IGLATATEFARRGARLVLSDVDQP-A-------LEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLAD 100 (301)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHH-H-------HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEECCHH-H-------HHHHHHHHHhcCCceEEEEccCCCHHHHHHHHH
Confidence 4578999997653 334444433 12578888887632 1 233456677766544 5678988876432211
Q ss_pred -----CCcccEEEEcC
Q 044601 91 -----THKFDRVIYNF 101 (213)
Q Consensus 91 -----~~~FDrIiFNF 101 (213)
....|.||.|=
T Consensus 101 ~~~~~~g~id~lvnnA 116 (301)
T 3tjr_A 101 EAFRLLGGVDVVFSNA 116 (301)
T ss_dssp HHHHHHSSCSEEEECC
T ss_pred HHHHhCCCCCEEEECC
Confidence 24689888773
No 322
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=43.57 E-value=44 Score=26.98 Aligned_cols=79 Identities=18% Similarity=0.287 Sum_probs=47.6
Q ss_pred CCCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEE-EEeeeccccCCCcccc-
Q 044601 14 SKQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLV-FYGVDAMQMSQHFFLR- 90 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V-~~gVDAt~L~~~~~l~- 90 (213)
+++++|+.|=+.. .-+++++.+ ..+.+|+++..+.. ......++|++.|..+ .+.+|.++......+-
T Consensus 6 ~~k~vlVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~--------~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 76 (252)
T 3h7a_A 6 RNATVAVIGAGDY-IGAEIAKKFAAEGFTVFAGRRNGE--------KLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLN 76 (252)
T ss_dssp CSCEEEEECCSSH-HHHHHHHHHHHTTCEEEEEESSGG--------GGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCCEEEEEeCCHH--------HHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHH
Confidence 4578999986643 334444433 12568888887632 1234456677767654 5678988866432211
Q ss_pred ----CCcccEEEEcC
Q 044601 91 ----THKFDRVIYNF 101 (213)
Q Consensus 91 ----~~~FDrIiFNF 101 (213)
..+.|.+|.|=
T Consensus 77 ~~~~~g~id~lv~nA 91 (252)
T 3h7a_A 77 AADAHAPLEVTIFNV 91 (252)
T ss_dssp HHHHHSCEEEEEECC
T ss_pred HHHhhCCceEEEECC
Confidence 14789888774
No 323
>3soz_A ORF 245 protein, cytoplasmic protein STM1381; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.60A {Salmonella enterica subsp}
Probab=43.31 E-value=5 Score=34.05 Aligned_cols=73 Identities=19% Similarity=0.215 Sum_probs=36.8
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcch-HHHHHHHHHhCCCEEEEeeeccccCCCccc--
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSN-AVDNVRELEERGCLVFYGVDAMQMSQHFFL-- 89 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~-a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l-- 89 (213)
++.+|||++||-=-|++. |+ .+..-.+| .+|.+ +...++.|+..|..|-| +.+......++.
T Consensus 1 ~~~~~~l~~gesw~~~~~----~~-kg~~~~~~---------~~y~~g~~~~~~aL~~~~~~V~~-i~~~~~~~~fP~~~ 65 (248)
T 3soz_A 1 SNAMKILFIGESWHIHMI----HS-KGFDSFTS---------SKYEEGADYLLSCLRQGNIDVDY-MPAHIVQTRFPQTA 65 (248)
T ss_dssp ---CEEEEEECCCEEEEE----EE-ETTEEEEE---------EEECCCSHHHHHHHTTTTCEEEE-EETTHHHHSCCCSH
T ss_pred CCceEEEEecCceeeeee----Ee-eccccccc---------chhhhhHHHHHHHHhcCCceeEE-eCchhhhhhCCCCh
Confidence 467899999994221110 00 11222222 23443 34567889999987764 222222122221
Q ss_pred -cCCcccEEEEc
Q 044601 90 -RTHKFDRVIYN 100 (213)
Q Consensus 90 -~~~~FDrIiFN 100 (213)
.-..||.||+.
T Consensus 66 ~~L~~yDvIIl~ 77 (248)
T 3soz_A 66 EALACYDAIVIS 77 (248)
T ss_dssp HHHHTCSEEEEE
T ss_pred HHHhcCCEEEEc
Confidence 12679999997
No 324
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=42.82 E-value=50 Score=26.54 Aligned_cols=79 Identities=14% Similarity=0.130 Sum_probs=45.2
Q ss_pred CCCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEE-EEeeeccccCCCccc--
Q 044601 14 SKQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLV-FYGVDAMQMSQHFFL-- 89 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V-~~gVDAt~L~~~~~l-- 89 (213)
++++||+.|=+.+ .-.++++++ ..+.+|+++..+.. . .....++|++.|..+ .+.+|.++......+
T Consensus 8 ~~k~vlVTGas~g-iG~~ia~~l~~~G~~V~~~~r~~~-~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 78 (260)
T 2ae2_A 8 EGCTALVTGGSRG-IGYGIVEELASLGASVYTCSRNQK-E-------LNDCLTQWRSKGFKVEASVCDLSSRSERQELMN 78 (260)
T ss_dssp TTCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCHH-H-------HHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCHH-H-------HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH
Confidence 4678999986643 223333332 12568888877632 1 223355666667654 456788876533221
Q ss_pred ----cC-CcccEEEEcC
Q 044601 90 ----RT-HKFDRVIYNF 101 (213)
Q Consensus 90 ----~~-~~FDrIiFNF 101 (213)
.. ...|.+|.|=
T Consensus 79 ~~~~~~~g~id~lv~~A 95 (260)
T 2ae2_A 79 TVANHFHGKLNILVNNA 95 (260)
T ss_dssp HHHHHTTTCCCEEEECC
T ss_pred HHHHHcCCCCCEEEECC
Confidence 11 5689888773
No 325
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=42.46 E-value=1.4e+02 Score=24.51 Aligned_cols=111 Identities=8% Similarity=-0.029 Sum_probs=63.3
Q ss_pred CCCeEEEEecCC---hhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCC----
Q 044601 14 SKQRILLVGEGD---FSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQH---- 86 (213)
Q Consensus 14 ~~~~ILlVGEGn---FSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~---- 86 (213)
...+||=||=|. =.++..+++.. +...|++.=++ .++++ .+..++ ...+..-+...|+.++...
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~-p~~~v~~vD~s--p~~l~---~Ar~~~---~~~~~v~~~~~D~~~~~~~~~~~ 147 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVN-PDARVVYVDID--PMVLT---HGRALL---AKDPNTAVFTADVRDPEYILNHP 147 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHC-TTCEEEEEESS--HHHHH---HHHHHH---TTCTTEEEEECCTTCHHHHHHSH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhC-CCCEEEEEECC--hHHHH---HHHHhc---CCCCCeEEEEeeCCCchhhhccc
Confidence 347999998765 33455555543 35577665544 33333 133333 2233334555687764311
Q ss_pred ---ccccCCcccEEEEcC--CcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccC
Q 044601 87 ---FFLRTHKFDRVIYNF--PHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEG 148 (213)
Q Consensus 87 ---~~l~~~~FDrIiFNF--PH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~ 148 (213)
..+....||.|+.++ -|+... -....|+.+..+|+ |+|.+.|+....
T Consensus 148 ~~~~~~d~~~~d~v~~~~vlh~~~d~--------------~~~~~l~~~~~~L~-pGG~l~i~~~~~ 199 (274)
T 2qe6_A 148 DVRRMIDFSRPAAIMLVGMLHYLSPD--------------VVDRVVGAYRDALA-PGSYLFMTSLVD 199 (274)
T ss_dssp HHHHHCCTTSCCEEEETTTGGGSCTT--------------THHHHHHHHHHHSC-TTCEEEEEEEBC
T ss_pred hhhccCCCCCCEEEEEechhhhCCcH--------------HHHHHHHHHHHhCC-CCcEEEEEEecC
Confidence 012224799999875 233210 12367788889998 999999887654
No 326
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=42.40 E-value=67 Score=27.75 Aligned_cols=50 Identities=16% Similarity=0.228 Sum_probs=35.4
Q ss_pred CCCCCCeEEEEecCCh-hHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCE
Q 044601 11 HYSSKQRILLVGEGDF-SFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCL 73 (213)
Q Consensus 11 ~y~~~~~ILlVGEGnF-SFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~ 73 (213)
...++++||++|=|.. .++..||++.| ...|+++.... +.++.++++|+.
T Consensus 182 ~~~~g~~VlV~GaG~vG~~aiqlAk~~G-a~~Vi~~~~~~------------~~~~~a~~lGa~ 232 (398)
T 1kol_A 182 GVGPGSTVYVAGAGPVGLAAAASARLLG-AAVVIVGDLNP------------ARLAHAKAQGFE 232 (398)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCH------------HHHHHHHHTTCE
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCC-CCeEEEEcCCH------------HHHHHHHHcCCc
Confidence 4567899999998765 35667788876 44788885542 335667788886
No 327
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=42.35 E-value=61 Score=27.59 Aligned_cols=58 Identities=9% Similarity=0.114 Sum_probs=36.3
Q ss_pred cCCCCCCeEEEEec-CChh-HHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEe
Q 044601 10 NHYSSKQRILLVGE-GDFS-FSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYG 77 (213)
Q Consensus 10 ~~y~~~~~ILlVGE-GnFS-FS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~g 77 (213)
....++++||+.|- |..- ++..||+..| ..+++|+-.++ +..+.++.++++|+...++
T Consensus 163 ~~~~~g~~VlV~Ga~G~vG~~aiqlak~~G--a~vi~~~~~~~--------~~~~~~~~~~~lGa~~vi~ 222 (357)
T 1zsy_A 163 EQLQPGDSVIQNASNSGVGQAVIQIAAALG--LRTINVVRDRP--------DIQKLSDRLKSLGAEHVIT 222 (357)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHHT--CEEEEEECCCS--------CHHHHHHHHHHTTCSEEEE
T ss_pred hccCCCCEEEEeCCcCHHHHHHHHHHHHcC--CEEEEEecCcc--------chHHHHHHHHhcCCcEEEe
Confidence 34567899999997 7664 5666788875 45666653221 1223355677889865543
No 328
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=41.10 E-value=40 Score=29.17 Aligned_cols=98 Identities=18% Similarity=0.258 Sum_probs=55.1
Q ss_pred CCCCCeEEEEecCChh-HHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeee---ccccCCC-
Q 044601 12 YSSKQRILLVGEGDFS-FSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVD---AMQMSQH- 86 (213)
Q Consensus 12 y~~~~~ILlVGEGnFS-FS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVD---At~L~~~- 86 (213)
..++++||++|-|..- ++..||++.| +..|+||+... +.++.++++|+...++.+ ...+.+.
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~------------~~~~~~~~lGa~~vi~~~~~~~~~~~~~v 259 (380)
T 1vj0_A 193 SFAGKTVVIQGAGPLGLFGVVIARSLG-AENVIVIAGSP------------NRLKLAEEIGADLTLNRRETSVEERRKAI 259 (380)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTT-BSEEEEEESCH------------HHHHHHHHTTCSEEEETTTSCHHHHHHHH
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHcC-CceEEEEcCCH------------HHHHHHHHcCCcEEEeccccCcchHHHHH
Confidence 4578999999977554 3445577764 35899987542 224556678876544332 1111110
Q ss_pred ccc-cCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEE
Q 044601 87 FFL-RTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHV 143 (213)
Q Consensus 87 ~~l-~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihv 143 (213)
..+ ....+|.||=+ +|.. ..+..+.++|+ ++|+|.+
T Consensus 260 ~~~~~g~g~Dvvid~---~g~~-----------------~~~~~~~~~l~-~~G~iv~ 296 (380)
T 1vj0_A 260 MDITHGRGADFILEA---TGDS-----------------RALLEGSELLR-RGGFYSV 296 (380)
T ss_dssp HHHTTTSCEEEEEEC---SSCT-----------------THHHHHHHHEE-EEEEEEE
T ss_pred HHHhCCCCCcEEEEC---CCCH-----------------HHHHHHHHHHh-cCCEEEE
Confidence 011 13368877643 2321 12455677887 8887644
No 329
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=41.05 E-value=60 Score=28.89 Aligned_cols=122 Identities=15% Similarity=0.062 Sum_probs=64.4
Q ss_pred CCCeEEEEecCChhHHHHHHHHhC------------CCCeEEEeccCCHHHHHhhcchHHHHHHHHHhC---CCEEEEee
Q 044601 14 SKQRILLVGEGDFSFSLCLAREFG------------FAHNMVATCLDTQETIANKYSNAVDNVRELEER---GCLVFYGV 78 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~~------------~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~---g~~V~~gV 78 (213)
.+.+||=.|=|.=+|..++++.+. ...++++.-.+.. ..+ -|..|+. |... .+.|.+ -
T Consensus 171 ~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~--~~~---lA~~nl~-l~g~~~~~~~i~~-g 243 (445)
T 2okc_A 171 MGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPL--VVT---LASMNLY-LHGIGTDRSPIVC-E 243 (445)
T ss_dssp TTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHH--HHH---HHHHHHH-HTTCCSSCCSEEE-C
T ss_pred CCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHH--HHH---HHHHHHH-HhCCCcCCCCEee-C
Confidence 356788665555566777766541 1245666655532 111 2344443 2222 223332 3
Q ss_pred eccccCCCccccCCcccEEEEcCCcCCCcccccc--hHHHH-hhHHHHHHHHHHHHhhcccCCCeEEEEeccC
Q 044601 79 DAMQMSQHFFLRTHKFDRVIYNFPHVGFIFRENS--YCQIQ-LNKELVKGFLRNAKLLLKEENGEIHVTHKEG 148 (213)
Q Consensus 79 DAt~L~~~~~l~~~~FDrIiFNFPH~G~~~~e~~--~~~i~-~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~ 148 (213)
|+..... ..+||.||-|-|..+....+.. ..... .....-..|++.+..+|+ ++|.+.+.+.++
T Consensus 244 D~l~~~~-----~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk-~gG~~a~V~p~~ 310 (445)
T 2okc_A 244 DSLEKEP-----STLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLK-TGGRAAVVLPDN 310 (445)
T ss_dssp CTTTSCC-----SSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEE-EEEEEEEEEEHH
T ss_pred CCCCCcc-----cCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhc-cCCEEEEEECCc
Confidence 4433221 2479999999998875322110 00000 000112378888889998 999988777544
No 330
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=41.00 E-value=45 Score=28.43 Aligned_cols=96 Identities=14% Similarity=0.140 Sum_probs=54.6
Q ss_pred CeEEEEecCChhH-H-HHHH-HHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCC
Q 044601 16 QRILLVGEGDFSF-S-LCLA-REFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTH 92 (213)
Q Consensus 16 ~~ILlVGEGnFSF-S-~aLa-~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~ 92 (213)
++||++|=|..-- + ..|| +++| ..+|+||+-..+. ...++.++++|+... +.+...+.+-..+ ..
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~G-a~~Vi~~~~~~~~---------~~~~~~~~~lGa~~v-~~~~~~~~~i~~~-~g 241 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKG-YENLYCLGRRDRP---------DPTIDIIEELDATYV-DSRQTPVEDVPDV-YE 241 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTC-CCEEEEEECCCSS---------CHHHHHHHHTTCEEE-ETTTSCGGGHHHH-SC
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcC-CcEEEEEeCCccc---------HHHHHHHHHcCCccc-CCCccCHHHHHHh-CC
Confidence 8999999876653 4 4556 6665 3349998875420 012455677898665 4332222221111 22
Q ss_pred cccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEE
Q 044601 93 KFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVT 144 (213)
Q Consensus 93 ~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvT 144 (213)
.+|.||=. +|.. ..+..+..+|+ ++|+|.+.
T Consensus 242 g~Dvvid~---~g~~-----------------~~~~~~~~~l~-~~G~iv~~ 272 (357)
T 2b5w_A 242 QMDFIYEA---TGFP-----------------KHAIQSVQALA-PNGVGALL 272 (357)
T ss_dssp CEEEEEEC---SCCH-----------------HHHHHHHHHEE-EEEEEEEC
T ss_pred CCCEEEEC---CCCh-----------------HHHHHHHHHHh-cCCEEEEE
Confidence 68887632 3421 13556777887 88876543
No 331
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=40.97 E-value=34 Score=29.11 Aligned_cols=93 Identities=14% Similarity=0.211 Sum_probs=54.1
Q ss_pred CCCeEEEE-ecCChhHH-HHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCC-cccc
Q 044601 14 SKQRILLV-GEGDFSFS-LCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQH-FFLR 90 (213)
Q Consensus 14 ~~~~ILlV-GEGnFSFS-~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~-~~l~ 90 (213)
++++||++ |-|..--+ ..||+..| .+|++|+-.. ++++.++++|+......+. .+.+. ..+.
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~G--a~Vi~~~~~~------------~~~~~~~~lGa~~vi~~~~-~~~~~~~~~~ 214 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYG--LRVITTASRN------------ETIEWTKKMGADIVLNHKE-SLLNQFKTQG 214 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTT--CEEEEECCSH------------HHHHHHHHHTCSEEECTTS-CHHHHHHHHT
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcC--CEEEEEeCCH------------HHHHHHHhcCCcEEEECCc-cHHHHHHHhC
Confidence 68999999 68877544 44466665 4899997642 2355666778765443321 11110 1112
Q ss_pred CCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEE
Q 044601 91 THKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIH 142 (213)
Q Consensus 91 ~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ih 142 (213)
...+|.|+ |. +|.. ..+..+..+|+ ++|+|.
T Consensus 215 ~~g~Dvv~-d~--~g~~-----------------~~~~~~~~~l~-~~G~iv 245 (346)
T 3fbg_A 215 IELVDYVF-CT--FNTD-----------------MYYDDMIQLVK-PRGHIA 245 (346)
T ss_dssp CCCEEEEE-ES--SCHH-----------------HHHHHHHHHEE-EEEEEE
T ss_pred CCCccEEE-EC--CCch-----------------HHHHHHHHHhc-cCCEEE
Confidence 35688665 42 3321 34566778887 888874
No 332
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=40.73 E-value=83 Score=25.00 Aligned_cols=80 Identities=20% Similarity=0.132 Sum_probs=45.3
Q ss_pred CCCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEE-EEeeeccccCCCccc-c
Q 044601 14 SKQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLV-FYGVDAMQMSQHFFL-R 90 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V-~~gVDAt~L~~~~~l-~ 90 (213)
++++||+.|=+.+ .-.+|++.+ ..+.+|++++..+.+.+ ....++|++.|..+ .+.+|.++......+ .
T Consensus 20 ~~k~vlItGasgg-iG~~la~~l~~~G~~v~~~~r~~~~~~-------~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~ 91 (274)
T 1ja9_A 20 AGKVALTTGAGRG-IGRGIAIELGRRGASVVVNYGSSSKAA-------EEVVAELKKLGAQGVAIQADISKPSEVVALFD 91 (274)
T ss_dssp TTCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESSCHHHH-------HHHHHHHHHTTCCEEEEECCTTSHHHHHHHHH
T ss_pred CCCEEEEeCCCch-HHHHHHHHHHHCCCEEEEEcCCchHHH-------HHHHHHHHhcCCcEEEEEecCCCHHHHHHHHH
Confidence 3578999987654 233333332 12568888877444322 23345666666544 567788875432211 1
Q ss_pred -----CCcccEEEEcC
Q 044601 91 -----THKFDRVIYNF 101 (213)
Q Consensus 91 -----~~~FDrIiFNF 101 (213)
....|.||.|=
T Consensus 92 ~~~~~~~~~d~vi~~A 107 (274)
T 1ja9_A 92 KAVSHFGGLDFVMSNS 107 (274)
T ss_dssp HHHHHHSCEEEEECCC
T ss_pred HHHHHcCCCCEEEECC
Confidence 13688888764
No 333
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=40.68 E-value=36 Score=28.55 Aligned_cols=95 Identities=14% Similarity=0.190 Sum_probs=54.9
Q ss_pred CCCCCCeEEEEe-cCChhHHHH-HHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccC--CC
Q 044601 11 HYSSKQRILLVG-EGDFSFSLC-LAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMS--QH 86 (213)
Q Consensus 11 ~y~~~~~ILlVG-EGnFSFS~a-La~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~--~~ 86 (213)
...++++||+.| -|..--+.+ +++..| .+|++|+.+.+ .++.++++|+.... |.++-. +.
T Consensus 137 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G--~~V~~~~~~~~------------~~~~~~~~g~~~~~--~~~~~~~~~~ 200 (327)
T 1qor_A 137 EIKPDEQFLFHAAAGGVGLIACQWAKALG--AKLIGTVGTAQ------------KAQSALKAGAWQVI--NYREEDLVER 200 (327)
T ss_dssp CCCTTCEEEESSTTBHHHHHHHHHHHHHT--CEEEEEESSHH------------HHHHHHHHTCSEEE--ETTTSCHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcC--CEEEEEeCCHH------------HHHHHHHcCCCEEE--ECCCccHHHH
Confidence 456789999999 677655444 356665 58999876521 12344445765443 433211 11
Q ss_pred c-c-ccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEE
Q 044601 87 F-F-LRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHV 143 (213)
Q Consensus 87 ~-~-l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihv 143 (213)
. . .....+|.||-|- |. ..+..+..+|+ ++|+|.+
T Consensus 201 ~~~~~~~~~~D~vi~~~---g~------------------~~~~~~~~~l~-~~G~iv~ 237 (327)
T 1qor_A 201 LKEITGGKKVRVVYDSV---GR------------------DTWERSLDCLQ-RRGLMVS 237 (327)
T ss_dssp HHHHTTTCCEEEEEECS---CG------------------GGHHHHHHTEE-EEEEEEE
T ss_pred HHHHhCCCCceEEEECC---ch------------------HHHHHHHHHhc-CCCEEEE
Confidence 0 0 1234699988763 32 12466777887 8887644
No 334
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=40.68 E-value=42 Score=27.25 Aligned_cols=79 Identities=18% Similarity=0.267 Sum_probs=46.1
Q ss_pred CCCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCC--CEEEEeeecccc-CCCccc
Q 044601 14 SKQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEERG--CLVFYGVDAMQM-SQHFFL 89 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g--~~V~~gVDAt~L-~~~~~l 89 (213)
++++||+.|=+.+ .-.++++.+ ..+.+|++++.+... ..+.+++|++.+ ....+.+|.++. .....+
T Consensus 11 ~~k~vlITGas~G-IG~~~a~~L~~~G~~V~~~~r~~~~--------~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~ 81 (311)
T 3o26_A 11 KRRCAVVTGGNKG-IGFEICKQLSSNGIMVVLTCRDVTK--------GHEAVEKLKNSNHENVVFHQLDVTDPIATMSSL 81 (311)
T ss_dssp -CCEEEESSCSSH-HHHHHHHHHHHTTCEEEEEESCHHH--------HHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHH
T ss_pred CCcEEEEecCCch-HHHHHHHHHHHCCCEEEEEeCCHHH--------HHHHHHHHHhcCCCceEEEEccCCCcHHHHHHH
Confidence 4678899886532 233333332 125789999887431 234466676654 345678899886 432111
Q ss_pred ------cCCcccEEEEcC
Q 044601 90 ------RTHKFDRVIYNF 101 (213)
Q Consensus 90 ------~~~~FDrIiFNF 101 (213)
.....|.||.|=
T Consensus 82 ~~~~~~~~g~iD~lv~nA 99 (311)
T 3o26_A 82 ADFIKTHFGKLDILVNNA 99 (311)
T ss_dssp HHHHHHHHSSCCEEEECC
T ss_pred HHHHHHhCCCCCEEEECC
Confidence 124789888774
No 335
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=40.62 E-value=51 Score=26.68 Aligned_cols=87 Identities=13% Similarity=0.109 Sum_probs=45.8
Q ss_pred cccccCCCCCCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEE-EEeeecccc
Q 044601 6 EKWSNHYSSKQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLV-FYGVDAMQM 83 (213)
Q Consensus 6 ~k~~~~y~~~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V-~~gVDAt~L 83 (213)
..|....++.++||+.|=+. -.-.++++++ ..+.+|+.+.-.+.+.+ ....+.+++.|..+ .+.+|.++.
T Consensus 17 n~~~~~m~~~k~vlITGas~-gIG~a~a~~l~~~G~~V~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~Dl~~~ 88 (272)
T 4e3z_A 17 NLYFQSMSDTPVVLVTGGSR-GIGAAVCRLAARQGWRVGVNYAANREAA-------DAVVAAITESGGEAVAIPGDVGNA 88 (272)
T ss_dssp -------CCSCEEEETTTTS-HHHHHHHHHHHHTTCEEEEEESSCHHHH-------HHHHHHHHHTTCEEEEEECCTTCH
T ss_pred hhhhhhccCCCEEEEECCCc-hHHHHHHHHHHHCCCEEEEEcCCChhHH-------HHHHHHHHhcCCcEEEEEcCCCCH
Confidence 34445556677899988543 3344454443 23567776644444322 23345666666654 567788876
Q ss_pred CCCccc------cCCcccEEEEc
Q 044601 84 SQHFFL------RTHKFDRVIYN 100 (213)
Q Consensus 84 ~~~~~l------~~~~FDrIiFN 100 (213)
.....+ .....|.||.|
T Consensus 89 ~~v~~~~~~~~~~~g~id~li~n 111 (272)
T 4e3z_A 89 ADIAAMFSAVDRQFGRLDGLVNN 111 (272)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEEC
T ss_pred HHHHHHHHHHHHhCCCCCEEEEC
Confidence 543221 11468988877
No 336
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=40.61 E-value=40 Score=28.76 Aligned_cols=93 Identities=20% Similarity=0.193 Sum_probs=56.0
Q ss_pred CCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCCcc
Q 044601 15 KQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTHKF 94 (213)
Q Consensus 15 ~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~~F 94 (213)
.++||++||..=.++.+|+. ....++..++.+...+. .| .|..|.++.+.... ....|
T Consensus 20 ~~~~l~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~-------~~------~~~~~~~~~~~~~~------~~~~~ 77 (343)
T 2pjd_A 20 QSRILFAGDLQDDLPARLDT---AASRAHTQQFHHWQVLS-------RQ------MGDNARFSLVATAD------DVADC 77 (343)
T ss_dssp TCEEEEEECCCSSHHHHSCC---SEEEEEESBHHHHHHHH-------HH------HGGGEEECSSCCHH------HHTTC
T ss_pred CCeEEEEcCCCChhhhhhhh---CCCEEEECCHHHHHHHH-------hh------cCCceEeccCCCcc------ccCCC
Confidence 46899999997777666651 12333333333332222 12 16667776643321 01358
Q ss_pred cEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEe
Q 044601 95 DRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTH 145 (213)
Q Consensus 95 DrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl 145 (213)
|.|+.-.|-. +.++..-+..+...+. ++++|.+.=
T Consensus 78 ~~~~~~~pk~---------------~~~~~~~l~~~~~~~~-~~~~~~~~g 112 (343)
T 2pjd_A 78 DTLIYYWPKN---------------KPEAQFQLMNLLSLLP-VGTDIFVVG 112 (343)
T ss_dssp SEEEEECCSS---------------HHHHHHHHHHHHTTSC-TTCEEEEEE
T ss_pred CEEEEECCCC---------------hHHHHHHHHHHHHhCC-CCCEEEEEE
Confidence 9999988843 3455566677888887 899987764
No 337
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=40.33 E-value=83 Score=26.42 Aligned_cols=78 Identities=13% Similarity=0.047 Sum_probs=50.5
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCC
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTH 92 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~ 92 (213)
.++ +||=||=|.=.++..|++.. ..|+|.-.|.. +.+ .+.+++. ..++++++ -|+.++.-.. ..
T Consensus 46 ~~~-~VLEIG~G~G~lt~~L~~~~---~~V~avEid~~--~~~---~l~~~~~---~~~v~vi~-~D~l~~~~~~---~~ 109 (271)
T 3fut_A 46 FTG-PVFEVGPGLGALTRALLEAG---AEVTAIEKDLR--LRP---VLEETLS---GLPVRLVF-QDALLYPWEE---VP 109 (271)
T ss_dssp CCS-CEEEECCTTSHHHHHHHHTT---CCEEEEESCGG--GHH---HHHHHTT---TSSEEEEE-SCGGGSCGGG---SC
T ss_pred CCC-eEEEEeCchHHHHHHHHHcC---CEEEEEECCHH--HHH---HHHHhcC---CCCEEEEE-CChhhCChhh---cc
Confidence 346 99999999888999999762 58999888853 111 1222222 23455554 4887765321 13
Q ss_pred cccEEEEcCCcCCC
Q 044601 93 KFDRVIYNFPHVGF 106 (213)
Q Consensus 93 ~FDrIiFNFPH~G~ 106 (213)
.||.||-|.|---.
T Consensus 110 ~~~~iv~NlPy~is 123 (271)
T 3fut_A 110 QGSLLVANLPYHIA 123 (271)
T ss_dssp TTEEEEEEECSSCC
T ss_pred CccEEEecCccccc
Confidence 58999999997553
No 338
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=40.25 E-value=63 Score=25.35 Aligned_cols=31 Identities=16% Similarity=0.335 Sum_probs=18.9
Q ss_pred CeEEEEecCChhHHHHHHHHh-CCCCeEEEeccC
Q 044601 16 QRILLVGEGDFSFSLCLAREF-GFAHNMVATCLD 48 (213)
Q Consensus 16 ~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~d 48 (213)
++|+++|=|.+..+++ +.+ ..+..+++...|
T Consensus 1 M~iiIiG~G~~G~~la--~~L~~~g~~v~vid~~ 32 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLA--RSMLSRKYGVVIINKD 32 (218)
T ss_dssp CCEEEECCHHHHHHHH--HHHHHTTCCEEEEESC
T ss_pred CEEEEECCCHHHHHHH--HHHHhCCCeEEEEECC
Confidence 4799999887655444 333 124566665544
No 339
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=40.19 E-value=2.2e+02 Score=26.06 Aligned_cols=108 Identities=17% Similarity=0.083 Sum_probs=61.4
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHH----HhCCC---EE-EEeeeccccC
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVREL----EERGC---LV-FYGVDAMQMS 84 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L----~~~g~---~V-~~gVDAt~L~ 84 (213)
.++++||=||=|.=..++.||+..+ ...+++--+.. ++.+ -|..|++.+ +..|. .| +..-|+.++.
T Consensus 172 ~~gd~VLDLGCGtG~l~l~lA~~~g-~~kVvGIDiS~--~~le---lAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp 245 (438)
T 3uwp_A 172 TDDDLFVDLGSGVGQVVLQVAAATN-CKHHYGVEKAD--IPAK---YAETMDREFRKWMKWYGKKHAEYTLERGDFLSEE 245 (438)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHCC-CSEEEEEECCH--HHHH---HHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHCC-CCEEEEEeCCH--HHHH---HHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCc
Confidence 4678899888777777777777654 33577665552 2222 134454433 23332 33 4455777654
Q ss_pred CCccccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEE
Q 044601 85 QHFFLRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVT 144 (213)
Q Consensus 85 ~~~~l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvT 144 (213)
-.. .-..||.|+-|.+.... ..++.| .....+|+ |+|.|.++
T Consensus 246 ~~d--~~~~aDVVf~Nn~~F~p----------dl~~aL-----~Ei~RvLK-PGGrIVss 287 (438)
T 3uwp_A 246 WRE--RIANTSVIFVNNFAFGP----------EVDHQL-----KERFANMK-EGGRIVSS 287 (438)
T ss_dssp HHH--HHHTCSEEEECCTTCCH----------HHHHHH-----HHHHTTSC-TTCEEEES
T ss_pred ccc--ccCCccEEEEcccccCc----------hHHHHH-----HHHHHcCC-CCcEEEEe
Confidence 211 11369999999775331 123332 23446898 99998644
No 340
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=40.03 E-value=60 Score=27.43 Aligned_cols=95 Identities=15% Similarity=0.204 Sum_probs=54.7
Q ss_pred CCCCCCeEEEEec-CChhHHH-HHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccC--CC
Q 044601 11 HYSSKQRILLVGE-GDFSFSL-CLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMS--QH 86 (213)
Q Consensus 11 ~y~~~~~ILlVGE-GnFSFS~-aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~--~~ 86 (213)
...++++||++|- |..--+. .++++.| .+|++|..+.+ .++.++++|+... +|.++-. +.
T Consensus 163 ~~~~g~~vlV~Gasg~iG~~~~~~a~~~G--~~Vi~~~~~~~------------~~~~~~~~ga~~~--~d~~~~~~~~~ 226 (343)
T 2eih_A 163 GVRPGDDVLVMAAGSGVSVAAIQIAKLFG--ARVIATAGSED------------KLRRAKALGADET--VNYTHPDWPKE 226 (343)
T ss_dssp CCCTTCEEEECSTTSTTHHHHHHHHHHTT--CEEEEEESSHH------------HHHHHHHHTCSEE--EETTSTTHHHH
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCC--CEEEEEeCCHH------------HHHHHHhcCCCEE--EcCCcccHHHH
Confidence 4567899999998 7765544 4466664 58999876421 1334455676544 3443311 11
Q ss_pred c-c-ccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEE
Q 044601 87 F-F-LRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHV 143 (213)
Q Consensus 87 ~-~-l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihv 143 (213)
. . .....+|.||-+-. .. .+..+.++|+ ++|++.+
T Consensus 227 ~~~~~~~~~~d~vi~~~g---~~------------------~~~~~~~~l~-~~G~~v~ 263 (343)
T 2eih_A 227 VRRLTGGKGADKVVDHTG---AL------------------YFEGVIKATA-NGGRIAI 263 (343)
T ss_dssp HHHHTTTTCEEEEEESSC---SS------------------SHHHHHHHEE-EEEEEEE
T ss_pred HHHHhCCCCceEEEECCC---HH------------------HHHHHHHhhc-cCCEEEE
Confidence 0 0 11347998886643 11 1455667887 8887644
No 341
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=40.02 E-value=51 Score=26.61 Aligned_cols=94 Identities=15% Similarity=0.100 Sum_probs=48.3
Q ss_pred CCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCCc
Q 044601 15 KQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTHK 93 (213)
Q Consensus 15 ~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~~ 93 (213)
.++||+.| ..| --.+|++.+ ..+..|++++..... . ..++.++ ..|.++......+-...
T Consensus 3 ~~~ilVtG-aG~-iG~~l~~~L~~~g~~V~~~~r~~~~-----~-----------~~~~~~~-~~Dl~d~~~~~~~~~~~ 63 (286)
T 3gpi_A 3 LSKILIAG-CGD-LGLELARRLTAQGHEVTGLRRSAQP-----M-----------PAGVQTL-IADVTRPDTLASIVHLR 63 (286)
T ss_dssp CCCEEEEC-CSH-HHHHHHHHHHHTTCCEEEEECTTSC-----C-----------CTTCCEE-ECCTTCGGGCTTGGGGC
T ss_pred CCcEEEEC-CCH-HHHHHHHHHHHCCCEEEEEeCCccc-----c-----------ccCCceE-EccCCChHHHHHhhcCC
Confidence 46899999 555 234444443 235789998876432 1 1355443 55776654332222245
Q ss_pred ccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHH
Q 044601 94 FDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAK 131 (213)
Q Consensus 94 FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~ 131 (213)
+|.||.+-.... .+....+..|-......++.|.
T Consensus 64 ~d~vih~a~~~~----~~~~~~~~~n~~~~~~ll~a~~ 97 (286)
T 3gpi_A 64 PEILVYCVAASE----YSDEHYRLSYVEGLRNTLSALE 97 (286)
T ss_dssp CSEEEECHHHHH----HC-----CCSHHHHHHHHHHTT
T ss_pred CCEEEEeCCCCC----CCHHHHHHHHHHHHHHHHHHHh
Confidence 999987643221 1111223345444555555554
No 342
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=39.68 E-value=37 Score=27.62 Aligned_cols=78 Identities=14% Similarity=0.157 Sum_probs=45.4
Q ss_pred CCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCE-EEEeeeccccCCCccc---
Q 044601 15 KQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCL-VFYGVDAMQMSQHFFL--- 89 (213)
Q Consensus 15 ~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~-V~~gVDAt~L~~~~~l--- 89 (213)
+++||+.|=+.+ .-.+|++.+ ..+.+|++++.+.. . .....++|++.|.. ..+.+|.++......+
T Consensus 31 ~k~vlITGasgg-IG~~la~~L~~~G~~V~~~~r~~~-~-------~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~ 101 (272)
T 1yb1_A 31 GEIVLITGAGHG-IGRLTAYEFAKLKSKLVLWDINKH-G-------LEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKK 101 (272)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHH-H-------HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEECCCch-HHHHHHHHHHHCCCEEEEEEcCHH-H-------HHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHH
Confidence 578999996653 334444433 12568888877632 1 22334566666654 3567888875532211
Q ss_pred ---cCCcccEEEEcC
Q 044601 90 ---RTHKFDRVIYNF 101 (213)
Q Consensus 90 ---~~~~FDrIiFNF 101 (213)
.....|.||.|=
T Consensus 102 ~~~~~g~iD~li~~A 116 (272)
T 1yb1_A 102 VKAEIGDVSILVNNA 116 (272)
T ss_dssp HHHHTCCCSEEEECC
T ss_pred HHHHCCCCcEEEECC
Confidence 124689888774
No 343
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=38.74 E-value=1.4e+02 Score=23.23 Aligned_cols=137 Identities=18% Similarity=0.145 Sum_probs=70.0
Q ss_pred CCCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCC-EEEEeeeccccCCCccccC
Q 044601 14 SKQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEERGC-LVFYGVDAMQMSQHFFLRT 91 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~-~V~~gVDAt~L~~~~~l~~ 91 (213)
++++||+.|=..|-=+ +|++.+ ..+.+|++++.+... ++.|...++ .+ +..|.+ ..... .-
T Consensus 20 ~~~~ilVtGatG~iG~-~l~~~L~~~G~~V~~~~R~~~~------------~~~~~~~~~~~~-~~~Dl~--~~~~~-~~ 82 (236)
T 3e8x_A 20 QGMRVLVVGANGKVAR-YLLSELKNKGHEPVAMVRNEEQ------------GPELRERGASDI-VVANLE--EDFSH-AF 82 (236)
T ss_dssp -CCEEEEETTTSHHHH-HHHHHHHHTTCEEEEEESSGGG------------HHHHHHTTCSEE-EECCTT--SCCGG-GG
T ss_pred CCCeEEEECCCChHHH-HHHHHHHhCCCeEEEEECChHH------------HHHHHhCCCceE-EEcccH--HHHHH-HH
Confidence 4689999997554322 222222 236789998876431 234555577 55 456776 21111 12
Q ss_pred CcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCC--C---------C--CcccHHh
Q 044601 92 HKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGD--P---------Y--NKWELVK 158 (213)
Q Consensus 92 ~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~--p---------y--~~W~i~~ 158 (213)
...|.||.|-.-... ++-...+..|-.-...+++.|++. ..++|...-.-+. + | ..+.++.
T Consensus 83 ~~~D~vi~~ag~~~~---~~~~~~~~~n~~~~~~l~~a~~~~---~~~~iv~~SS~~~~~~~~~~~~~~~Y~~sK~~~e~ 156 (236)
T 3e8x_A 83 ASIDAVVFAAGSGPH---TGADKTILIDLWGAIKTIQEAEKR---GIKRFIMVSSVGTVDPDQGPMNMRHYLVAKRLADD 156 (236)
T ss_dssp TTCSEEEECCCCCTT---SCHHHHHHTTTHHHHHHHHHHHHH---TCCEEEEECCTTCSCGGGSCGGGHHHHHHHHHHHH
T ss_pred cCCCEEEECCCCCCC---CCccccchhhHHHHHHHHHHHHHc---CCCEEEEEecCCCCCCCCChhhhhhHHHHHHHHHH
Confidence 468999987654332 222334444533344444444321 2345433322221 1 1 2345566
Q ss_pred HHHHhCcEEEEEeec
Q 044601 159 KAEKIGLTLQEVVPF 173 (213)
Q Consensus 159 lA~~~gl~l~~~~~F 173 (213)
+.+..|+.+.-.+|.
T Consensus 157 ~~~~~gi~~~~lrpg 171 (236)
T 3e8x_A 157 ELKRSSLDYTIVRPG 171 (236)
T ss_dssp HHHHSSSEEEEEEEC
T ss_pred HHHHCCCCEEEEeCC
Confidence 666778877666654
No 344
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=38.36 E-value=62 Score=27.67 Aligned_cols=94 Identities=20% Similarity=0.200 Sum_probs=53.5
Q ss_pred CCeEEEEecCChhH-HHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCCc
Q 044601 15 KQRILLVGEGDFSF-SLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTHK 93 (213)
Q Consensus 15 ~~~ILlVGEGnFSF-S~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~~ 93 (213)
+++||++|=|..-- +..||+..| .+|++|+....+ .+.++.++++|+... + +. .+.+...-....
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~G--a~Vi~~~~~~~~---------~~~~~~~~~~ga~~v-~-~~-~~~~~~~~~~~~ 246 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYG--LEVWMANRREPT---------EVEQTVIEETKTNYY-N-SS-NGYDKLKDSVGK 246 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHT--CEEEEEESSCCC---------HHHHHHHHHHTCEEE-E-CT-TCSHHHHHHHCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--CEEEEEeCCccc---------hHHHHHHHHhCCcee-c-hH-HHHHHHHHhCCC
Confidence 89999999876544 344467775 489999876410 123455666788655 3 21 211110001146
Q ss_pred ccEEEEcCCcCCCcccccchHHHHhhHHHHHHHH-HHHHhhcccCCCeEEE
Q 044601 94 FDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFL-RNAKLLLKEENGEIHV 143 (213)
Q Consensus 94 FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff-~Sa~~~L~~~~G~ihv 143 (213)
+|.||-+- |.. ..+ +.+..+|+ ++|.|.+
T Consensus 247 ~d~vid~~---g~~-----------------~~~~~~~~~~l~-~~G~iv~ 276 (366)
T 2cdc_A 247 FDVIIDAT---GAD-----------------VNILGNVIPLLG-RNGVLGL 276 (366)
T ss_dssp EEEEEECC---CCC-----------------THHHHHHGGGEE-EEEEEEE
T ss_pred CCEEEECC---CCh-----------------HHHHHHHHHHHh-cCCEEEE
Confidence 89887653 321 023 56677887 7887644
No 345
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=37.99 E-value=49 Score=26.86 Aligned_cols=64 Identities=16% Similarity=0.181 Sum_probs=38.1
Q ss_pred CCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCC
Q 044601 15 KQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQ 85 (213)
Q Consensus 15 ~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~ 85 (213)
.++|++||-|.-..-.|..-.. .+..|+--..... + +.....++.|++.|+.++.+..++.+..
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~-~~~~v~~~~~~~~--~----~~~~~~~~~l~~~gv~~~~~~~v~~i~~ 217 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEP-IAKEVSIIHRRDK--F----RAHEHSVENLHASKVNVLTPFVPAELIG 217 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTT-TBSEEEEECSSSS--C----SSCHHHHHHHHHSSCEEETTEEEEEEEC
T ss_pred CCEEEEECCCHhHHHHHHHHHh-hCCeEEEEEecCc--C----CccHHHHHHHhcCCeEEEeCceeeEEec
Confidence 6899999999876555542211 1334443333221 1 1122346779999999998766666654
No 346
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=37.81 E-value=69 Score=24.55 Aligned_cols=72 Identities=13% Similarity=0.110 Sum_probs=42.5
Q ss_pred CeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCCcc
Q 044601 16 QRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTHKF 94 (213)
Q Consensus 16 ~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~~F 94 (213)
++||+.|=..|== .+|++.+ ..+..|++.+.+... ++.|...++.++ ..|.++... .. -...
T Consensus 1 MkilVtGatG~iG-~~l~~~L~~~g~~V~~~~R~~~~------------~~~~~~~~~~~~-~~D~~d~~~-~~--~~~~ 63 (224)
T 3h2s_A 1 MKIAVLGATGRAG-SAIVAEARRRGHEVLAVVRDPQK------------AADRLGATVATL-VKEPLVLTE-AD--LDSV 63 (224)
T ss_dssp CEEEEETTTSHHH-HHHHHHHHHTTCEEEEEESCHHH------------HHHHTCTTSEEE-ECCGGGCCH-HH--HTTC
T ss_pred CEEEEEcCCCHHH-HHHHHHHHHCCCEEEEEEecccc------------cccccCCCceEE-ecccccccH-hh--cccC
Confidence 4799999755532 2232222 235789998876321 234444577654 568887765 22 2457
Q ss_pred cEEEEcCCcC
Q 044601 95 DRVIYNFPHV 104 (213)
Q Consensus 95 DrIiFNFPH~ 104 (213)
|.||.+-.-.
T Consensus 64 d~vi~~ag~~ 73 (224)
T 3h2s_A 64 DAVVDALSVP 73 (224)
T ss_dssp SEEEECCCCC
T ss_pred CEEEECCccC
Confidence 9988776543
No 347
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=37.77 E-value=55 Score=27.12 Aligned_cols=84 Identities=13% Similarity=-0.049 Sum_probs=45.2
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCH-HHHH-hhcchHHHHHHHHHhCC-CEEEEeeeccccCCCcccc
Q 044601 14 SKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQ-ETIA-NKYSNAVDNVRELEERG-CLVFYGVDAMQMSQHFFLR 90 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~-~~l~-~kY~~a~~ni~~L~~~g-~~V~~gVDAt~L~~~~~l~ 90 (213)
++.+||=+|=|.=.+|..||+. +..|++.-.+.. .+++ .....+..|++...-.+ ++ +..-|+..+-... .
T Consensus 83 ~~~~VLDlgcG~G~~a~~lA~~---g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~-~~~~d~~~~l~~~--~ 156 (258)
T 2r6z_A 83 AHPTVWDATAGLGRDSFVLASL---GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARIN-LHFGNAAEQMPAL--V 156 (258)
T ss_dssp GCCCEEETTCTTCHHHHHHHHT---TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEE-EEESCHHHHHHHH--H
T ss_pred CcCeEEEeeCccCHHHHHHHHh---CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeE-EEECCHHHHHHhh--h
Confidence 4578888777766677777764 346776666531 1111 11112444544332212 44 4455776642211 1
Q ss_pred C--CcccEEEEcCCc
Q 044601 91 T--HKFDRVIYNFPH 103 (213)
Q Consensus 91 ~--~~FDrIiFNFPH 103 (213)
. ..||.|++|-|.
T Consensus 157 ~~~~~fD~V~~dP~~ 171 (258)
T 2r6z_A 157 KTQGKPDIVYLDPMY 171 (258)
T ss_dssp HHHCCCSEEEECCCC
T ss_pred ccCCCccEEEECCCC
Confidence 2 579999998544
No 348
>1pdo_A Mannose permease; phosphoenolpyruvate dependent phosphotransferase system, phosphotransferase; 1.70A {Escherichia coli} SCOP: c.54.1.1 PDB: 1vrc_A 1vsq_A* 2jzo_A 2jzn_A
Probab=37.63 E-value=29 Score=25.96 Aligned_cols=57 Identities=21% Similarity=0.283 Sum_probs=36.5
Q ss_pred eEEEEecCChhHHHHHHHH----hCCCCeEEEeccC---CHHHHHhhcchHHHHHHHHHh-CCCEEEEee
Q 044601 17 RILLVGEGDFSFSLCLARE----FGFAHNMVATCLD---TQETIANKYSNAVDNVRELEE-RGCLVFYGV 78 (213)
Q Consensus 17 ~ILlVGEGnFSFS~aLa~~----~~~~~~l~ATs~d---s~~~l~~kY~~a~~ni~~L~~-~g~~V~~gV 78 (213)
.|++++=|+ ||.+|+.. +|...++.|-++. +.+++.++.. +-++.+.+ .|+.|+.++
T Consensus 3 ~iii~sHG~--~A~gl~~~~~~i~G~~~~v~ai~~~~~~~~~~~~~~i~---~~i~~~~~~~gvliLtDl 67 (135)
T 1pdo_A 3 AIVIGTHGW--AAEQLLKTAEMLLGEQENVGWIDFVPGENAETLIEKYN---AQLAKLDTTKGVLFLVDT 67 (135)
T ss_dssp EEEEECSBT--HHHHHHHHHHHHHCCCSSEEEECBCTTCCHHHHHHHHH---HHHTTSCCTTCEEEEESS
T ss_pred eEEEEeChH--HHHHHHHHHHHHcCCcCCEEEEEeeCCCCHHHHHHHHH---HHHHhcCCCCCEEEEEEC
Confidence 689999996 88888764 3655788887775 4556666542 33444433 356666443
No 349
>3ipr_A PTS system, IIA component; stranded parallel beta-sheet flanked by 3 alpha-helices on EACH SIDE, transferase; 2.50A {Enterococcus faecalis} SCOP: c.54.1.0
Probab=37.52 E-value=54 Score=25.09 Aligned_cols=57 Identities=16% Similarity=0.331 Sum_probs=37.5
Q ss_pred eEEEEecCChhHHHHHHHH----hCCCCeEEEeccC---CHHHHHhhcchHHHHHHHHHh-CCCEEEEee
Q 044601 17 RILLVGEGDFSFSLCLARE----FGFAHNMVATCLD---TQETIANKYSNAVDNVRELEE-RGCLVFYGV 78 (213)
Q Consensus 17 ~ILlVGEGnFSFS~aLa~~----~~~~~~l~ATs~d---s~~~l~~kY~~a~~ni~~L~~-~g~~V~~gV 78 (213)
.|++|+=| +||.+|+.. +|...++.|-++. +.+++.+++ .+-++.+.. .|+.|+.++
T Consensus 3 giii~sHg--~~A~gl~~~~~~i~G~~~~i~av~~~~~~~~~~~~~~i---~~~i~~~~~~~gvlvLtDl 67 (150)
T 3ipr_A 3 GIVIATHG--ALSDGAKDAATVIMGATENIETVNLNSGDDVQALGGQI---KTAIENVQQGDGVLVMVDL 67 (150)
T ss_dssp EEEEEEET--THHHHHHHHHHHHHSCCCSEEEEEECTTCCHHHHHHHH---HHHHHHHCSSSCEEEEESS
T ss_pred EEEEEECc--HHHHHHHHHHHHHcCCCCCEEEEEecCCCCHHHHHHHH---HHHHHhcCCCCCEEEEEeC
Confidence 58999999 789888764 3555677776664 456677764 334566643 466666444
No 350
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=37.41 E-value=74 Score=26.21 Aligned_cols=53 Identities=19% Similarity=0.196 Sum_probs=42.0
Q ss_pred CeEEEEecCChhHHHHH-HHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEe
Q 044601 16 QRILLVGEGDFSFSLCL-AREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYG 77 (213)
Q Consensus 16 ~~ILlVGEGnFSFS~aL-a~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~g 77 (213)
.+|-+||=+|....+.. ...+ +..|.--++++++++. .-+++|++.|+.|+-|
T Consensus 107 ~kIavVg~~~~~~~~~~i~~ll--~~~i~~~~~~~~ee~~-------~~i~~l~~~G~~vVVG 160 (225)
T 2pju_A 107 SSIGVVTYQETIPALVAFQKTF--NLRLDQRSYITEEDAR-------GQINELKANGTEAVVG 160 (225)
T ss_dssp SCEEEEEESSCCHHHHHHHHHH--TCCEEEEEESSHHHHH-------HHHHHHHHTTCCEEEE
T ss_pred CcEEEEeCchhhhHHHHHHHHh--CCceEEEEeCCHHHHH-------HHHHHHHHCCCCEEEC
Confidence 49999999999888665 4455 4677778899887654 4589999999988777
No 351
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=37.23 E-value=75 Score=25.99 Aligned_cols=76 Identities=13% Similarity=0.163 Sum_probs=45.3
Q ss_pred CCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEE-EEeeeccccCCCcccc--
Q 044601 15 KQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLV-FYGVDAMQMSQHFFLR-- 90 (213)
Q Consensus 15 ~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V-~~gVDAt~L~~~~~l~-- 90 (213)
++++|+.|=+.+ .-+++++++ ..+.+|+++..+. ...+..++|++.|..+ .+.+|.++......+.
T Consensus 31 gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~---------~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 100 (273)
T 3uf0_A 31 GRTAVVTGAGSG-IGRAIAHGYARAGAHVLAWGRTD---------GVKEVADEIADGGGSAEAVVADLADLEGAANVAEE 100 (273)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESST---------HHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEcCHH---------HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence 578999987653 233333332 1256888887331 1334566777777655 5678888876543221
Q ss_pred ---CCcccEEEEc
Q 044601 91 ---THKFDRVIYN 100 (213)
Q Consensus 91 ---~~~FDrIiFN 100 (213)
..+.|.+|-|
T Consensus 101 ~~~~g~iD~lv~n 113 (273)
T 3uf0_A 101 LAATRRVDVLVNN 113 (273)
T ss_dssp HHHHSCCCEEEEC
T ss_pred HHhcCCCcEEEEC
Confidence 2468988877
No 352
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=36.90 E-value=1.2e+02 Score=25.96 Aligned_cols=100 Identities=14% Similarity=0.163 Sum_probs=58.4
Q ss_pred CCCCCCeEEEEecCChh-HHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeee--ccccCCC-
Q 044601 11 HYSSKQRILLVGEGDFS-FSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVD--AMQMSQH- 86 (213)
Q Consensus 11 ~y~~~~~ILlVGEGnFS-FS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVD--At~L~~~- 86 (213)
...++++||++|-|..- ++..||++.| ...|+|+....+ .++.++++|+....+.. ...+.+.
T Consensus 190 ~~~~g~~VlV~GaG~vG~~a~q~a~~~G-a~~Vi~~~~~~~------------~~~~a~~lGa~~vi~~~~~~~~~~~~i 256 (378)
T 3uko_A 190 KVEPGSNVAIFGLGTVGLAVAEGAKTAG-ASRIIGIDIDSK------------KYETAKKFGVNEFVNPKDHDKPIQEVI 256 (378)
T ss_dssp CCCTTCCEEEECCSHHHHHHHHHHHHHT-CSCEEEECSCTT------------HHHHHHTTTCCEEECGGGCSSCHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHH------------HHHHHHHcCCcEEEccccCchhHHHHH
Confidence 45678999999988654 3444577776 447888875532 24456778886544332 1111111
Q ss_pred ccccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCC-CeEEEE
Q 044601 87 FFLRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEEN-GEIHVT 144 (213)
Q Consensus 87 ~~l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~-G~ihvT 144 (213)
..+....+|.|+=. +|.. ..+..+..+|+ ++ |.+.+.
T Consensus 257 ~~~~~gg~D~vid~---~g~~-----------------~~~~~~~~~l~-~g~G~iv~~ 294 (378)
T 3uko_A 257 VDLTDGGVDYSFEC---IGNV-----------------SVMRAALECCH-KGWGTSVIV 294 (378)
T ss_dssp HHHTTSCBSEEEEC---SCCH-----------------HHHHHHHHTBC-TTTCEEEEC
T ss_pred HHhcCCCCCEEEEC---CCCH-----------------HHHHHHHHHhh-ccCCEEEEE
Confidence 11123378887642 3421 34666778887 75 886553
No 353
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=36.39 E-value=55 Score=27.65 Aligned_cols=95 Identities=12% Similarity=0.142 Sum_probs=54.4
Q ss_pred CCCCCCeEEEEecCChhH-HHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccc--cCCC-
Q 044601 11 HYSSKQRILLVGEGDFSF-SLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQ--MSQH- 86 (213)
Q Consensus 11 ~y~~~~~ILlVGEGnFSF-S~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~--L~~~- 86 (213)
...++++||++|=|..-- +..+|+..| .+|++|+.+. +.++.++++|+.... |.++ +.+.
T Consensus 161 ~~~~g~~VlV~GaG~vG~~~~~~a~~~G--a~Vi~~~~~~------------~~~~~~~~lGa~~~~--d~~~~~~~~~~ 224 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGLGHVAVQYAKAMG--LNVVAVDIGD------------EKLELAKELGADLVV--NPLKEDAAKFM 224 (339)
T ss_dssp TCCTTCEEEEECCSTTHHHHHHHHHHTT--CEEEEECSCH------------HHHHHHHHTTCSEEE--CTTTSCHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEeCCH------------HHHHHHHHCCCCEEe--cCCCccHHHHH
Confidence 356789999999987544 344466665 5899987652 224456677876443 4332 1111
Q ss_pred ccccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEE
Q 044601 87 FFLRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHV 143 (213)
Q Consensus 87 ~~l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihv 143 (213)
..+. ..+|.||-+ +|.. .-+..+..+|+ ++|++.+
T Consensus 225 ~~~~-~~~d~vid~---~g~~-----------------~~~~~~~~~l~-~~G~~v~ 259 (339)
T 1rjw_A 225 KEKV-GGVHAAVVT---AVSK-----------------PAFQSAYNSIR-RGGACVL 259 (339)
T ss_dssp HHHH-SSEEEEEES---SCCH-----------------HHHHHHHHHEE-EEEEEEE
T ss_pred HHHh-CCCCEEEEC---CCCH-----------------HHHHHHHHHhh-cCCEEEE
Confidence 0011 468887754 3321 12455667777 7776543
No 354
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=36.17 E-value=1.5e+02 Score=23.00 Aligned_cols=78 Identities=14% Similarity=0.115 Sum_probs=44.0
Q ss_pred CCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHH-hCCCE-EEEeeeccccCCCcccc-
Q 044601 15 KQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELE-ERGCL-VFYGVDAMQMSQHFFLR- 90 (213)
Q Consensus 15 ~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~-~~g~~-V~~gVDAt~L~~~~~l~- 90 (213)
.+++|+.|=+.+ .-+++++++ ..+.+|+.++.+.. .+ ....++|. ..|.. ..+.+|.++......+-
T Consensus 2 ~k~vlITGas~g-IG~~ia~~l~~~G~~V~~~~r~~~-~~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~ 72 (235)
T 3l77_A 2 MKVAVITGASRG-IGEAIARALARDGYALALGARSVD-RL-------EKIAHELMQEQGVEVFYHHLDVSKAESVEEFSK 72 (235)
T ss_dssp CCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCHH-HH-------HHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC
T ss_pred CCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCHH-HH-------HHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHH
Confidence 467899986542 344555544 13568888887632 11 22234443 33544 45678988876432221
Q ss_pred -----CCcccEEEEcC
Q 044601 91 -----THKFDRVIYNF 101 (213)
Q Consensus 91 -----~~~FDrIiFNF 101 (213)
..+.|.+|.|=
T Consensus 73 ~~~~~~g~id~li~~A 88 (235)
T 3l77_A 73 KVLERFGDVDVVVANA 88 (235)
T ss_dssp -HHHHHSSCSEEEECC
T ss_pred HHHHhcCCCCEEEECC
Confidence 14689888774
No 355
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=35.97 E-value=38 Score=27.82 Aligned_cols=79 Identities=14% Similarity=0.134 Sum_probs=46.6
Q ss_pred CCCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEE-EEeeeccccCCCccc--
Q 044601 14 SKQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLV-FYGVDAMQMSQHFFL-- 89 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V-~~gVDAt~L~~~~~l-- 89 (213)
+++++|+.|=+.+ --.++++.+ ..+.+|+++..+.+ .....+++|++.|..+ .+.+|.++......+
T Consensus 25 ~gk~~lVTGas~g-IG~aia~~la~~G~~V~~~~r~~~--------~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~ 95 (271)
T 4ibo_A 25 GGRTALVTGSSRG-LGRAMAEGLAVAGARILINGTDPS--------RVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFA 95 (271)
T ss_dssp TTCEEEETTCSSH-HHHHHHHHHHHTTCEEEECCSCHH--------HHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCHH--------HHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHH
Confidence 3578888885542 233344333 12568888876532 1334567777777544 567788876643221
Q ss_pred ----cCCcccEEEEcC
Q 044601 90 ----RTHKFDRVIYNF 101 (213)
Q Consensus 90 ----~~~~FDrIiFNF 101 (213)
...+.|.+|.|=
T Consensus 96 ~~~~~~g~iD~lv~nA 111 (271)
T 4ibo_A 96 RLDEQGIDVDILVNNA 111 (271)
T ss_dssp HHHHHTCCCCEEEECC
T ss_pred HHHHHCCCCCEEEECC
Confidence 124689888773
No 356
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=35.96 E-value=2e+02 Score=24.42 Aligned_cols=127 Identities=10% Similarity=0.037 Sum_probs=78.7
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhC-CCEEEEeeeccccCCCccccCC
Q 044601 14 SKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEER-GCLVFYGVDAMQMSQHFFLRTH 92 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~-g~~V~~gVDAt~L~~~~~l~~~ 92 (213)
++++||=||=|.=.|+..|++. + +..|+|.=... +.|.. .+++. .+.++-..|+..+... .+...
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~-g-a~~V~aVDvs~-~mL~~----------a~r~~~rv~~~~~~ni~~l~~~-~l~~~ 150 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQN-G-AKLVYAVDVGT-NQLVW----------KLRQDDRVRSMEQYNFRYAEPV-DFTEG 150 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-T-CSEEEEECSSS-SCSCH----------HHHTCTTEEEECSCCGGGCCGG-GCTTC
T ss_pred cccEEEecCCCccHHHHHHHhC-C-CCEEEEEECCH-HHHHH----------HHHhCcccceecccCceecchh-hCCCC
Confidence 4679999999999999999876 3 55788764442 22211 13322 2334445566655421 12234
Q ss_pred cccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccC---CCC----------------Cc
Q 044601 93 KFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEG---DPY----------------NK 153 (213)
Q Consensus 93 ~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~---~py----------------~~ 153 (213)
.||.|+.+.-.... ...|..+..+|+ |+|.+.+..+.- .+. ..
T Consensus 151 ~fD~v~~d~sf~sl-----------------~~vL~e~~rvLk-pGG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~ 212 (291)
T 3hp7_A 151 LPSFASIDVSFISL-----------------NLILPALAKILV-DGGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVL 212 (291)
T ss_dssp CCSEEEECCSSSCG-----------------GGTHHHHHHHSC-TTCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHH
T ss_pred CCCEEEEEeeHhhH-----------------HHHHHHHHHHcC-cCCEEEEEECcccccChhhcCCCCccCCHHHHHHHH
Confidence 59999997643321 356778889998 999998875321 000 01
Q ss_pred ccHHhHHHHhCcEEEEEee
Q 044601 154 WELVKKAEKIGLTLQEVVP 172 (213)
Q Consensus 154 W~i~~lA~~~gl~l~~~~~ 172 (213)
=++..+++.+||.+.....
T Consensus 213 ~~v~~~~~~~Gf~v~~~~~ 231 (291)
T 3hp7_A 213 ETVTAFAVDYGFSVKGLDF 231 (291)
T ss_dssp HHHHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHHHCCCEEEEEEE
Confidence 2345677889999888654
No 357
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=35.90 E-value=39 Score=25.77 Aligned_cols=34 Identities=12% Similarity=0.212 Sum_probs=22.1
Q ss_pred CCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCC
Q 044601 15 KQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDT 49 (213)
Q Consensus 15 ~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds 49 (213)
.++||+.|=+.+= -.+|++++..+.+|++++.+.
T Consensus 3 kM~vlVtGasg~i-G~~~~~~l~~g~~V~~~~r~~ 36 (202)
T 3d7l_A 3 AMKILLIGASGTL-GSAVKERLEKKAEVITAGRHS 36 (202)
T ss_dssp SCEEEEETTTSHH-HHHHHHHHTTTSEEEEEESSS
T ss_pred CcEEEEEcCCcHH-HHHHHHHHHCCCeEEEEecCc
Confidence 3589999966542 344554443467899887764
No 358
>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A
Probab=35.74 E-value=22 Score=32.40 Aligned_cols=89 Identities=15% Similarity=0.301 Sum_probs=56.6
Q ss_pred CCCCeEEEEec-CChhHHHHHHHHhCCCCeEEEeccCCHHHHH----hhcchHHHHHHHHHhCCC-EEEEeeeccccCCC
Q 044601 13 SSKQRILLVGE-GDFSFSLCLAREFGFAHNMVATCLDTQETIA----NKYSNAVDNVRELEERGC-LVFYGVDAMQMSQH 86 (213)
Q Consensus 13 ~~~~~ILlVGE-GnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~----~kY~~a~~ni~~L~~~g~-~V~~gVDAt~L~~~ 86 (213)
...+++|++|= ..++-|.+++-+++.+..+++.+++.+..-. ..+.+.....+++++.|. -+.+..|+++-...
T Consensus 48 ~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i 127 (401)
T 4ggo_A 48 KAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIK 127 (401)
T ss_dssp CCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHH
Confidence 34689999984 4677766666554446789999998643211 112233445567777776 45789999885433
Q ss_pred ccc------cCCcccEEEEcC
Q 044601 87 FFL------RTHKFDRVIYNF 101 (213)
Q Consensus 87 ~~l------~~~~FDrIiFNF 101 (213)
..+ ...+.|.+|.|=
T Consensus 128 ~~vi~~i~~~~G~IDiLVhS~ 148 (401)
T 4ggo_A 128 AQVIEEAKKKGIKFDLIVYSL 148 (401)
T ss_dssp HHHHHHHHHTTCCEEEEEECC
T ss_pred HHHHHHHHHhcCCCCEEEEec
Confidence 221 247899999883
No 359
>3lfh_A Manxa, phosphotransferase system, mannose/fructose-speci component IIA; PTS; 1.80A {Thermoanaerobacter tengcongensis} SCOP: c.54.1.0
Probab=35.45 E-value=1.1e+02 Score=23.21 Aligned_cols=56 Identities=18% Similarity=0.362 Sum_probs=37.5
Q ss_pred CeEEEEecCChhHHHHHHHH----hCCCCeEEEeccC---CHHHHHhhcchHHHHHHHH-H-hCCCEEEE
Q 044601 16 QRILLVGEGDFSFSLCLARE----FGFAHNMVATCLD---TQETIANKYSNAVDNVREL-E-ERGCLVFY 76 (213)
Q Consensus 16 ~~ILlVGEGnFSFS~aLa~~----~~~~~~l~ATs~d---s~~~l~~kY~~a~~ni~~L-~-~~g~~V~~ 76 (213)
-.|++++=|+ ||.+|+.. +|...++.|-++. +.+++.+++. +-++.+ . ..|+.|+-
T Consensus 4 igiii~sHG~--~A~gl~~~~~~i~G~~~~v~av~~~~~~~~~~~~~~i~---~~i~~~~~~~~gvliLt 68 (144)
T 3lfh_A 4 KFVLIITHGD--FGKGLLSGAEVIIGKQENVHTVGLNLGDNIEVVRKEVE---KIIKEKLQEDKEIIIVV 68 (144)
T ss_dssp EEEEEEEETT--HHHHHHHHHHHHHCCCSSEEEEEECTTCCHHHHHHHHH---HHHHHHHTTTCEEEEEE
T ss_pred ceEEEEeCcH--HHHHHHHHHHHHcCCCCcEEEEEccCCCCHHHHHHHHH---HHHHHhhCCCCcEEEEE
Confidence 3699999997 78888764 3655688887774 5577777653 446666 3 24555553
No 360
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=34.95 E-value=46 Score=29.76 Aligned_cols=85 Identities=19% Similarity=0.242 Sum_probs=46.7
Q ss_pred CCCCeEEEEecCChhHHHHH-HHHhCCCCeEEEeccCCHHHHHhh-cc-hH-HHHHHHHHhCCCEEEEeeeccccCCCcc
Q 044601 13 SSKQRILLVGEGDFSFSLCL-AREFGFAHNMVATCLDTQETIANK-YS-NA-VDNVRELEERGCLVFYGVDAMQMSQHFF 88 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aL-a~~~~~~~~l~ATs~ds~~~l~~k-Y~-~a-~~ni~~L~~~g~~V~~gVDAt~L~~~~~ 88 (213)
...++|++||-|.-..-.|. +..++ ..|+--.. .+.++.+ .+ +. ..-.+.|++.|++|+.+..++.+.....
T Consensus 192 ~~~~~vvVIGgG~ig~E~A~~l~~~g--~~Vtlv~~--~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~ 267 (490)
T 2bc0_A 192 KDIKRVAVVGAGYIGVELAEAFQRKG--KEVVLIDV--VDTCLAGYYDRDLTDLMAKNMEEHGIQLAFGETVKEVAGNGK 267 (490)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHTT--CEEEEEES--SSSTTTTTSCHHHHHHHHHHHHTTTCEEEETCCEEEEECSSS
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCC--CeEEEEEc--ccchhhhHHHHHHHHHHHHHHHhCCeEEEeCCEEEEEEcCCc
Confidence 45789999999975544443 22334 34433222 1222221 11 12 2345778899999999877776653211
Q ss_pred -----cc--CCcccEEEEcC
Q 044601 89 -----LR--THKFDRVIYNF 101 (213)
Q Consensus 89 -----l~--~~~FDrIiFNF 101 (213)
+. ...+|.||+--
T Consensus 268 v~~v~~~g~~i~~D~Vi~a~ 287 (490)
T 2bc0_A 268 VEKIITDKNEYDVDMVILAV 287 (490)
T ss_dssp CCEEEESSCEEECSEEEECC
T ss_pred EEEEEECCcEEECCEEEECC
Confidence 11 13478888753
No 361
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=34.94 E-value=44 Score=28.32 Aligned_cols=95 Identities=15% Similarity=0.103 Sum_probs=53.5
Q ss_pred CCCeEEEEecCChh-HHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeec-cccCCCcccc-
Q 044601 14 SKQRILLVGEGDFS-FSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDA-MQMSQHFFLR- 90 (213)
Q Consensus 14 ~~~~ILlVGEGnFS-FS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDA-t~L~~~~~l~- 90 (213)
++++||++|=|..- ++..||++..++..|+||+...+ .++.++++|+...++.+. .+.. ..+.
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~------------~~~~~~~lGa~~vi~~~~~~~~~--~~~~~ 235 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKK------------HRDFALELGADYVSEMKDAESLI--NKLTD 235 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHH------------HHHHHHHHTCSEEECHHHHHHHH--HHHHT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHH------------HHHHHHHhCCCEEeccccchHHH--HHhhc
Confidence 78999999987543 45556777711247999875421 234556667754443221 1111 0111
Q ss_pred CCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEE
Q 044601 91 THKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHV 143 (213)
Q Consensus 91 ~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihv 143 (213)
...+|.||=. +|.. .-+..+..+|+ ++|++.+
T Consensus 236 g~g~D~vid~---~g~~-----------------~~~~~~~~~l~-~~G~iv~ 267 (344)
T 2h6e_A 236 GLGASIAIDL---VGTE-----------------ETTYNLGKLLA-QEGAIIL 267 (344)
T ss_dssp TCCEEEEEES---SCCH-----------------HHHHHHHHHEE-EEEEEEE
T ss_pred CCCccEEEEC---CCCh-----------------HHHHHHHHHhh-cCCEEEE
Confidence 3368887643 3321 23556677887 8887654
No 362
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=34.78 E-value=1.3e+02 Score=24.61 Aligned_cols=79 Identities=20% Similarity=0.267 Sum_probs=47.3
Q ss_pred CCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEE-EEeeeccccCCCcccc--
Q 044601 15 KQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLV-FYGVDAMQMSQHFFLR-- 90 (213)
Q Consensus 15 ~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V-~~gVDAt~L~~~~~l~-- 90 (213)
++.+|+.|=+.+ .-.++++.+ ..+.+|+.+...+.+.+ ...+++|+..|..+ .+.+|.++......+-
T Consensus 29 ~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 100 (280)
T 4da9_A 29 RPVAIVTGGRRG-IGLGIARALAASGFDIAITGIGDAEGV-------APVIAELSGLGARVIFLRADLADLSSHQATVDA 100 (280)
T ss_dssp CCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCCHHHH-------HHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHH
T ss_pred CCEEEEecCCCH-HHHHHHHHHHHCCCeEEEEeCCCHHHH-------HHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence 567899886542 233333333 13568888876554432 33456677766544 5678998876543221
Q ss_pred ----CCcccEEEEcC
Q 044601 91 ----THKFDRVIYNF 101 (213)
Q Consensus 91 ----~~~FDrIiFNF 101 (213)
..+.|.+|.|=
T Consensus 101 ~~~~~g~iD~lvnnA 115 (280)
T 4da9_A 101 VVAEFGRIDCLVNNA 115 (280)
T ss_dssp HHHHHSCCCEEEEEC
T ss_pred HHHHcCCCCEEEECC
Confidence 24689998884
No 363
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=34.76 E-value=43 Score=27.58 Aligned_cols=79 Identities=15% Similarity=0.077 Sum_probs=46.4
Q ss_pred CCCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCE-EEEeeeccccCCCccc--
Q 044601 14 SKQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCL-VFYGVDAMQMSQHFFL-- 89 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~-V~~gVDAt~L~~~~~l-- 89 (213)
+++++|+.|=+.+ .-.++++.+ ..+.+|+.++.+.+ ......++|++.|.. ..+.+|.++......+
T Consensus 31 ~gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~--------~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~ 101 (276)
T 3r1i_A 31 SGKRALITGASTG-IGKKVALAYAEAGAQVAVAARHSD--------ALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLD 101 (276)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESSGG--------GGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEeCCHH--------HHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHH
Confidence 3578999996643 223333332 12568888877632 123445667766643 3567888887643321
Q ss_pred ----cCCcccEEEEcC
Q 044601 90 ----RTHKFDRVIYNF 101 (213)
Q Consensus 90 ----~~~~FDrIiFNF 101 (213)
+..+.|.+|.|=
T Consensus 102 ~~~~~~g~iD~lvnnA 117 (276)
T 3r1i_A 102 QMTGELGGIDIAVCNA 117 (276)
T ss_dssp HHHHHHSCCSEEEECC
T ss_pred HHHHHcCCCCEEEECC
Confidence 124689988774
No 364
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=34.74 E-value=1.7e+02 Score=23.20 Aligned_cols=78 Identities=21% Similarity=0.271 Sum_probs=45.1
Q ss_pred CCeEEEEecCCh---hHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCE-EEEeeeccccCCCccc-
Q 044601 15 KQRILLVGEGDF---SFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCL-VFYGVDAMQMSQHFFL- 89 (213)
Q Consensus 15 ~~~ILlVGEGnF---SFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~-V~~gVDAt~L~~~~~l- 89 (213)
+++||+.|=+.+ ..+..|+++ +.+|+++..+...+ ...+..++|++.|.. ..+.+|.++......+
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~---G~~V~~~~r~~~~~------~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~ 72 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAAD---GFDIAVADLPQQEE------QAAETIKLIEAADQKAVFVGLDVTDKANFDSAI 72 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHH---TCEEEEEECGGGHH------HHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC---CCEEEEEeCCcchH------HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHH
Confidence 467888886543 444445544 46788887764321 122345566665543 4567888876543221
Q ss_pred -----cCCcccEEEEcC
Q 044601 90 -----RTHKFDRVIYNF 101 (213)
Q Consensus 90 -----~~~~FDrIiFNF 101 (213)
.....|.+|.|=
T Consensus 73 ~~~~~~~g~iD~lv~nA 89 (258)
T 3a28_C 73 DEAAEKLGGFDVLVNNA 89 (258)
T ss_dssp HHHHHHHTCCCEEEECC
T ss_pred HHHHHHhCCCCEEEECC
Confidence 124689888774
No 365
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=34.60 E-value=1.7e+02 Score=24.14 Aligned_cols=79 Identities=14% Similarity=0.154 Sum_probs=45.0
Q ss_pred CCCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCC----EEEEeeeccccCCCcc
Q 044601 14 SKQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEERGC----LVFYGVDAMQMSQHFF 88 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~----~V~~gVDAt~L~~~~~ 88 (213)
++++||+.|=+.+ .-+++++.+ ..+.+|+++..+. +.+ ....++|++.|. ...+.+|.++......
T Consensus 25 ~~k~vlVTGas~g-IG~aia~~L~~~G~~V~~~~r~~-~~~-------~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~ 95 (297)
T 1xhl_A 25 SGKSVIITGSSNG-IGRSAAVIFAKEGAQVTITGRNE-DRL-------EETKQQILKAGVPAEKINAVVADVTEASGQDD 95 (297)
T ss_dssp TTCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESCH-HHH-------HHHHHHHHHTTCCGGGEEEEECCTTSHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCH-HHH-------HHHHHHHHhcCCCCceEEEEecCCCCHHHHHH
Confidence 3578888886653 334444433 1256888887763 222 223455665553 3456788887654322
Q ss_pred c------cCCcccEEEEcC
Q 044601 89 L------RTHKFDRVIYNF 101 (213)
Q Consensus 89 l------~~~~FDrIiFNF 101 (213)
+ +....|.||.|=
T Consensus 96 ~~~~~~~~~g~iD~lvnnA 114 (297)
T 1xhl_A 96 IINTTLAKFGKIDILVNNA 114 (297)
T ss_dssp HHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHhcCCCCEEEECC
Confidence 1 124689988874
No 366
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=34.25 E-value=1.7e+02 Score=23.11 Aligned_cols=79 Identities=14% Similarity=0.050 Sum_probs=44.9
Q ss_pred CCCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCE-EEEeeeccccCCCccc--
Q 044601 14 SKQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCL-VFYGVDAMQMSQHFFL-- 89 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~-V~~gVDAt~L~~~~~l-- 89 (213)
+++++|+.|=+.. --+++++.+ ..+.+|++++.+. +. .....++|++.|.. ..+.+|.++......+
T Consensus 6 ~~k~~lVTGas~g-IG~aia~~l~~~G~~V~~~~r~~-~~-------~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~ 76 (247)
T 2jah_A 6 QGKVALITGASSG-IGEATARALAAEGAAVAIAARRV-EK-------LRALGDELTAAGAKVHVLELDVADRQGVDAAVA 76 (247)
T ss_dssp TTCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCH-HH-------HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEECCH-HH-------HHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHH
Confidence 3578999986543 233333332 1256888887763 22 22334566666654 3567888876543221
Q ss_pred ----cCCcccEEEEcC
Q 044601 90 ----RTHKFDRVIYNF 101 (213)
Q Consensus 90 ----~~~~FDrIiFNF 101 (213)
.....|.+|.|=
T Consensus 77 ~~~~~~g~id~lv~nA 92 (247)
T 2jah_A 77 STVEALGGLDILVNNA 92 (247)
T ss_dssp HHHHHHSCCSEEEECC
T ss_pred HHHHHcCCCCEEEECC
Confidence 124689888873
No 367
>2xdq_B Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=34.20 E-value=28 Score=31.95 Aligned_cols=33 Identities=15% Similarity=0.340 Sum_probs=23.7
Q ss_pred CCCCCCeEEEEecCChhHHHHH--HHHhCCCCeEEEe
Q 044601 11 HYSSKQRILLVGEGDFSFSLCL--AREFGFAHNMVAT 45 (213)
Q Consensus 11 ~y~~~~~ILlVGEGnFSFS~aL--a~~~~~~~~l~AT 45 (213)
.+-.++|+++.||++..++++- .+.+| ..++++
T Consensus 299 ~~l~Gkrv~i~gd~~~~~~l~~~L~~elG--m~vv~~ 333 (511)
T 2xdq_B 299 QNLTGKKAVVFGDNTHAAAMTKILSREMG--IHVVWA 333 (511)
T ss_dssp HTTTTCEEEEEECHHHHHHHHHHHHHHHC--CEEEEE
T ss_pred HhccCCEEEEEcCChHHHHHHHHHHHhCC--CEEEEe
Confidence 5667899999999998777763 35665 444554
No 368
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=33.88 E-value=61 Score=27.22 Aligned_cols=98 Identities=16% Similarity=0.187 Sum_probs=56.3
Q ss_pred CCCCCCeEEEEe-cCChhHHHH-HHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCc-
Q 044601 11 HYSSKQRILLVG-EGDFSFSLC-LAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHF- 87 (213)
Q Consensus 11 ~y~~~~~ILlVG-EGnFSFS~a-La~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~- 87 (213)
...++++||++| -|..--+.+ ++++.| .++++|+.+.+ .++.++++|+....+.+...+.+..
T Consensus 145 ~~~~g~~vlV~Ga~g~iG~~~~~~a~~~G--a~Vi~~~~~~~------------~~~~~~~~ga~~~~~~~~~~~~~~~~ 210 (334)
T 3qwb_A 145 HVKKGDYVLLFAAAGGVGLILNQLLKMKG--AHTIAVASTDE------------KLKIAKEYGAEYLINASKEDILRQVL 210 (334)
T ss_dssp CCCTTCEEEESSTTBHHHHHHHHHHHHTT--CEEEEEESSHH------------HHHHHHHTTCSEEEETTTSCHHHHHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCC--CEEEEEeCCHH------------HHHHHHHcCCcEEEeCCCchHHHHHH
Confidence 456789999999 777654444 466654 58999886421 2445667787655433322221110
Q ss_pred c-ccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEE
Q 044601 88 F-LRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVT 144 (213)
Q Consensus 88 ~-l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvT 144 (213)
. .....+|.|+=+ +|. ..+..+..+|+ ++|+|.+.
T Consensus 211 ~~~~~~g~D~vid~---~g~------------------~~~~~~~~~l~-~~G~iv~~ 246 (334)
T 3qwb_A 211 KFTNGKGVDASFDS---VGK------------------DTFEISLAALK-RKGVFVSF 246 (334)
T ss_dssp HHTTTSCEEEEEEC---CGG------------------GGHHHHHHHEE-EEEEEEEC
T ss_pred HHhCCCCceEEEEC---CCh------------------HHHHHHHHHhc-cCCEEEEE
Confidence 0 123568877643 232 12455667887 88876543
No 369
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=33.69 E-value=97 Score=25.81 Aligned_cols=94 Identities=16% Similarity=0.194 Sum_probs=52.8
Q ss_pred CCCCC-eEEEEec-CChhH-HHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccC-C-C
Q 044601 12 YSSKQ-RILLVGE-GDFSF-SLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMS-Q-H 86 (213)
Q Consensus 12 y~~~~-~ILlVGE-GnFSF-S~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~-~-~ 86 (213)
..+++ +||+.|- |..-- +..||++.| ..+++|+-..+ .++.++++|+...++. ++.. + .
T Consensus 147 ~~~g~~~VlV~Ga~G~vG~~~~q~a~~~G--a~vi~~~~~~~------------~~~~~~~lGa~~v~~~--~~~~~~~~ 210 (330)
T 1tt7_A 147 LSPEKGSVLVTGATGGVGGIAVSMLNKRG--YDVVASTGNRE------------AADYLKQLGASEVISR--EDVYDGTL 210 (330)
T ss_dssp CCGGGCCEEEESTTSHHHHHHHHHHHHHT--CCEEEEESSSS------------THHHHHHHTCSEEEEH--HHHCSSCC
T ss_pred cCCCCceEEEECCCCHHHHHHHHHHHHCC--CEEEEEeCCHH------------HHHHHHHcCCcEEEEC--CCchHHHH
Confidence 34454 8999997 87754 445577776 46888776522 1234455677554433 2221 1 1
Q ss_pred ccccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEE
Q 044601 87 FFLRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHV 143 (213)
Q Consensus 87 ~~l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihv 143 (213)
..+....+|.||=+ +|. .-+..+..+++ ++|++.+
T Consensus 211 ~~~~~~~~d~vid~---~g~------------------~~~~~~~~~l~-~~G~iv~ 245 (330)
T 1tt7_A 211 KALSKQQWQGAVDP---VGG------------------KQLASLLSKIQ-YGGSVAV 245 (330)
T ss_dssp CSSCCCCEEEEEES---CCT------------------HHHHHHHTTEE-EEEEEEE
T ss_pred HHhhcCCccEEEEC---CcH------------------HHHHHHHHhhc-CCCEEEE
Confidence 11223468877643 342 11445677887 8888654
No 370
>2xdq_A Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=33.49 E-value=39 Score=30.32 Aligned_cols=33 Identities=12% Similarity=0.281 Sum_probs=23.0
Q ss_pred CCCCCeEEEEecCChhHHHH-HHHHhCCCCeEEEec
Q 044601 12 YSSKQRILLVGEGDFSFSLC-LAREFGFAHNMVATC 46 (213)
Q Consensus 12 y~~~~~ILlVGEGnFSFS~a-La~~~~~~~~l~ATs 46 (213)
|-.++|+++.||++..++++ +++.+| ..++++.
T Consensus 314 ~l~GKrv~i~g~~~~~~~la~~L~elG--m~vv~~g 347 (460)
T 2xdq_A 314 LVRGKSVFFMGDNLLEISLARFLIRCG--MRVLEIG 347 (460)
T ss_dssp HHTTCEEEECCCSSCHHHHHHHHHHTT--CEEEEEE
T ss_pred HhcCCEEEEECCchHHHHHHHHHHHCC--CEEEEeC
Confidence 44579999999999888875 345665 4555443
No 371
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=33.38 E-value=49 Score=27.17 Aligned_cols=79 Identities=15% Similarity=0.124 Sum_probs=44.8
Q ss_pred CCCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccc---
Q 044601 14 SKQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFL--- 89 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l--- 89 (213)
++++||+.|=+.+ .-+++++.+ ..+.+|+++..+. +. ..+..++|++.|-...+.+|.++......+
T Consensus 28 ~~k~vlVTGas~g-IG~aia~~L~~~G~~V~~~~r~~-~~-------~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~ 98 (276)
T 2b4q_A 28 AGRIALVTGGSRG-IGQMIAQGLLEAGARVFICARDA-EA-------CADTATRLSAYGDCQAIPADLSSEAGARRLAQA 98 (276)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEECSCH-HH-------HHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHH
T ss_pred CCCEEEEeCCCCh-HHHHHHHHHHHCCCEEEEEeCCH-HH-------HHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHH
Confidence 3578999986543 233344333 1256888887763 22 223455666656334567788875533211
Q ss_pred ---cCCcccEEEEcC
Q 044601 90 ---RTHKFDRVIYNF 101 (213)
Q Consensus 90 ---~~~~FDrIiFNF 101 (213)
.....|.||.|=
T Consensus 99 ~~~~~g~iD~lvnnA 113 (276)
T 2b4q_A 99 LGELSARLDILVNNA 113 (276)
T ss_dssp HHHHCSCCSEEEECC
T ss_pred HHHhcCCCCEEEECC
Confidence 124689888774
No 372
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=33.37 E-value=1.1e+02 Score=25.56 Aligned_cols=54 Identities=13% Similarity=0.228 Sum_probs=36.3
Q ss_pred CCCCCCeEEEEecCCh-hHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEe
Q 044601 11 HYSSKQRILLVGEGDF-SFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYG 77 (213)
Q Consensus 11 ~y~~~~~ILlVGEGnF-SFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~g 77 (213)
.-.++++||++|=|.- .++..++++.+ +.+|+||+-.. +.++.++++|+....+
T Consensus 160 ~~~~g~~VlV~GaG~~g~~a~~~a~~~~-g~~Vi~~~~~~------------~r~~~~~~~Ga~~~i~ 214 (348)
T 4eez_A 160 GVKPGDWQVIFGAGGLGNLAIQYAKNVF-GAKVIAVDINQ------------DKLNLAKKIGADVTIN 214 (348)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTS-CCEEEEEESCH------------HHHHHHHHTTCSEEEE
T ss_pred CCCCCCEEEEEcCCCccHHHHHHHHHhC-CCEEEEEECcH------------HHhhhhhhcCCeEEEe
Confidence 3467899999999875 45555566664 67899987542 2245566777765543
No 373
>3if4_A Integron cassette protein HFX_CASS5; integron cassette protein mobIle metagenome structural genomics PSI-2 protein structure initiative midwest center for structural genomics; HET: MSE; 2.18A {Unidentified}
Probab=32.90 E-value=27 Score=26.13 Aligned_cols=12 Identities=50% Similarity=0.678 Sum_probs=10.1
Q ss_pred CCCeEEEEeccC
Q 044601 137 ENGEIHVTHKEG 148 (213)
Q Consensus 137 ~~G~ihvTl~~~ 148 (213)
..|+||||+...
T Consensus 34 ~~Grihv~p~~s 45 (119)
T 3if4_A 34 GTGRIHVTPGES 45 (119)
T ss_dssp TTSCEEEEESSC
T ss_pred cCCcEEEeeCCC
Confidence 699999999654
No 374
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=32.76 E-value=1.8e+02 Score=22.84 Aligned_cols=79 Identities=16% Similarity=0.148 Sum_probs=45.1
Q ss_pred CCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEE-EEeeeccccCCCccc-c-
Q 044601 15 KQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLV-FYGVDAMQMSQHFFL-R- 90 (213)
Q Consensus 15 ~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V-~~gVDAt~L~~~~~l-~- 90 (213)
+++||+.|=..+ .-.++++++ ..+.+|++++..+.+.+ ....+.|++.|..+ .+.+|.++......+ +
T Consensus 7 ~k~vlITGasgg-iG~~~a~~l~~~G~~V~~~~r~~~~~~-------~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~ 78 (261)
T 1gee_A 7 GKVVVITGSSTG-LGKSMAIRFATEKAKVVVNYRSKEDEA-------NSVLEEIKKVGGEAIAVKGDVTVESDVINLVQS 78 (261)
T ss_dssp TCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESSCHHHH-------HHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHH
T ss_pred CCEEEEeCCCCh-HHHHHHHHHHHCCCEEEEEcCCChHHH-------HHHHHHHHhcCCceEEEECCCCCHHHHHHHHHH
Confidence 578999986543 233444333 12568888887433322 23345566666554 567788876533211 1
Q ss_pred ----CCcccEEEEcC
Q 044601 91 ----THKFDRVIYNF 101 (213)
Q Consensus 91 ----~~~FDrIiFNF 101 (213)
....|.||.|=
T Consensus 79 ~~~~~g~id~li~~A 93 (261)
T 1gee_A 79 AIKEFGKLDVMINNA 93 (261)
T ss_dssp HHHHHSCCCEEEECC
T ss_pred HHHHcCCCCEEEECC
Confidence 13689988874
No 375
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=32.65 E-value=38 Score=27.39 Aligned_cols=77 Identities=8% Similarity=-0.047 Sum_probs=43.2
Q ss_pred CCCeEEEEecCCh---hHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCE-EEEeeeccccCCCccc
Q 044601 14 SKQRILLVGEGDF---SFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCL-VFYGVDAMQMSQHFFL 89 (213)
Q Consensus 14 ~~~~ILlVGEGnF---SFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~-V~~gVDAt~L~~~~~l 89 (213)
++++||+.|=+.+ ..+..|+++ +.+|+++..+... .....+.++..|.. ..+.+|.++......+
T Consensus 33 ~~k~vlITGasggIG~~la~~L~~~---G~~V~~~~r~~~~--------~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~ 101 (279)
T 3ctm_A 33 KGKVASVTGSSGGIGWAVAEAYAQA---GADVAIWYNSHPA--------DEKAEHLQKTYGVHSKAYKCNISDPKSVEET 101 (279)
T ss_dssp TTCEEEETTTTSSHHHHHHHHHHHH---TCEEEEEESSSCC--------HHHHHHHHHHHCSCEEEEECCTTCHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC---CCEEEEEeCCHHH--------HHHHHHHHHhcCCcceEEEeecCCHHHHHHH
Confidence 3578999986543 455555554 4678888766421 11222334444543 4567888875533211
Q ss_pred -c-----CCcccEEEEcC
Q 044601 90 -R-----THKFDRVIYNF 101 (213)
Q Consensus 90 -~-----~~~FDrIiFNF 101 (213)
. ....|.||.|=
T Consensus 102 ~~~~~~~~g~id~li~~A 119 (279)
T 3ctm_A 102 ISQQEKDFGTIDVFVANA 119 (279)
T ss_dssp HHHHHHHHSCCSEEEECG
T ss_pred HHHHHHHhCCCCEEEECC
Confidence 1 14589998874
No 376
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=32.27 E-value=70 Score=25.89 Aligned_cols=80 Identities=16% Similarity=0.174 Sum_probs=47.1
Q ss_pred CCCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEE-EEeeeccccCCCccc--
Q 044601 14 SKQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLV-FYGVDAMQMSQHFFL-- 89 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V-~~gVDAt~L~~~~~l-- 89 (213)
++++||+.|=+.+ .-.++++.+ ..+.+|++++..+.+.+ ....+.+++.|..+ .+.+|.++......+
T Consensus 28 ~~k~vlITGas~g-IG~~la~~l~~~G~~V~~~~r~~~~~~-------~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~ 99 (271)
T 4iin_A 28 TGKNVLITGASKG-IGAEIAKTLASMGLKVWINYRSNAEVA-------DALKNELEEKGYKAAVIKFDAASESDFIEAIQ 99 (271)
T ss_dssp SCCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESSCHHHH-------HHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCCHHHH-------HHHHHHHHhcCCceEEEECCCCCHHHHHHHHH
Confidence 3578899886543 333444433 13578888888655322 22345566666544 667888876543221
Q ss_pred ----cCCcccEEEEcC
Q 044601 90 ----RTHKFDRVIYNF 101 (213)
Q Consensus 90 ----~~~~FDrIiFNF 101 (213)
...+.|.||.|=
T Consensus 100 ~~~~~~g~id~li~nA 115 (271)
T 4iin_A 100 TIVQSDGGLSYLVNNA 115 (271)
T ss_dssp HHHHHHSSCCEEEECC
T ss_pred HHHHhcCCCCEEEECC
Confidence 124789888874
No 377
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=31.52 E-value=93 Score=25.73 Aligned_cols=79 Identities=15% Similarity=0.104 Sum_probs=43.9
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHh-------CCCEEEEeeeccccCCC
Q 044601 14 SKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEE-------RGCLVFYGVDAMQMSQH 86 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~-------~g~~V~~gVDAt~L~~~ 86 (213)
+.++||+.|=..|-=+.-+.+.+..+..|++.+..+.. ...++..++. .++. .+..|.++....
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--------~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~ 94 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTG--------HQYNLDEVKTLVSTEQWSRFC-FIEGDIRDLTTC 94 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSC--------CHHHHHHHHHTSCHHHHTTEE-EEECCTTCHHHH
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCC--------chhhhhhhhhccccccCCceE-EEEccCCCHHHH
Confidence 46899999976664333222222335788888776421 1233444544 3444 455777765432
Q ss_pred ccccCCcccEEEEcCC
Q 044601 87 FFLRTHKFDRVIYNFP 102 (213)
Q Consensus 87 ~~l~~~~FDrIiFNFP 102 (213)
..+ -..+|.||.+=-
T Consensus 95 ~~~-~~~~d~Vih~A~ 109 (351)
T 3ruf_A 95 EQV-MKGVDHVLHQAA 109 (351)
T ss_dssp HHH-TTTCSEEEECCC
T ss_pred HHH-hcCCCEEEECCc
Confidence 211 136898886643
No 378
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=31.34 E-value=1.3e+02 Score=24.11 Aligned_cols=76 Identities=20% Similarity=0.280 Sum_probs=42.3
Q ss_pred CCCeEEEEecC---ChhH--HHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHh-CCCEEEEeeeccccCCCc
Q 044601 14 SKQRILLVGEG---DFSF--SLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEE-RGCLVFYGVDAMQMSQHF 87 (213)
Q Consensus 14 ~~~~ILlVGEG---nFSF--S~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~-~g~~V~~gVDAt~L~~~~ 87 (213)
++++||+.|=+ ..-. +..|+++ +.+|++++.+.. ..+.+++|.+ .|....+.+|.++.....
T Consensus 8 ~~k~vlVTGas~~~gIG~~ia~~l~~~---G~~V~~~~r~~~---------~~~~~~~l~~~~~~~~~~~~D~~~~~~v~ 75 (265)
T 1qsg_A 8 SGKRILVTGVASKLSIAYGIAQAMHRE---GAELAFTYQNDK---------LKGRVEEFAAQLGSDIVLQCDVAEDASID 75 (265)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHT---TCEEEEEESSTT---------THHHHHHHHHHTTCCCEEECCTTCHHHHH
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHC---CCEEEEEcCcHH---------HHHHHHHHHHhcCCcEEEEccCCCHHHHH
Confidence 35789999964 4333 3333432 568888877641 1223444443 233356778888765332
Q ss_pred cc------cCCcccEEEEcC
Q 044601 88 FL------RTHKFDRVIYNF 101 (213)
Q Consensus 88 ~l------~~~~FDrIiFNF 101 (213)
.+ .....|.||.|=
T Consensus 76 ~~~~~~~~~~g~iD~lv~~A 95 (265)
T 1qsg_A 76 TMFAELGKVWPKFDGFVHSI 95 (265)
T ss_dssp HHHHHHHTTCSSEEEEEECC
T ss_pred HHHHHHHHHcCCCCEEEECC
Confidence 11 124688888774
No 379
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=31.28 E-value=1.6e+02 Score=23.82 Aligned_cols=79 Identities=14% Similarity=0.109 Sum_probs=44.3
Q ss_pred CCCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCC----EEEEeeeccccCCCcc
Q 044601 14 SKQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEERGC----LVFYGVDAMQMSQHFF 88 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~----~V~~gVDAt~L~~~~~ 88 (213)
++++||+.|=+.+ .-+++++.+ ..+.+|++++.+.+ . ..+..++|++.|. ...+..|.++......
T Consensus 5 ~~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~-~-------~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~ 75 (280)
T 1xkq_A 5 SNKTVIITGSSNG-IGRTTAILFAQEGANVTITGRSSE-R-------LEETRQIILKSGVSEKQVNSVVADVTTEDGQDQ 75 (280)
T ss_dssp TTCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESCHH-H-------HHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHH
T ss_pred CCCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEeCCHH-H-------HHHHHHHHHHcCCCCcceEEEEecCCCHHHHHH
Confidence 3578888886543 233333332 12568888877632 1 2233455665554 3456788887654322
Q ss_pred c------cCCcccEEEEcC
Q 044601 89 L------RTHKFDRVIYNF 101 (213)
Q Consensus 89 l------~~~~FDrIiFNF 101 (213)
+ +....|.||.|=
T Consensus 76 ~~~~~~~~~g~iD~lv~nA 94 (280)
T 1xkq_A 76 IINSTLKQFGKIDVLVNNA 94 (280)
T ss_dssp HHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHhcCCCCEEEECC
Confidence 1 124689888874
No 380
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=31.27 E-value=1e+02 Score=26.61 Aligned_cols=84 Identities=20% Similarity=0.225 Sum_probs=46.9
Q ss_pred CCCCeEEEEecCChhHHHHH-HHHhCCCCeEEEeccCCHHHHHhh-c-chH-HHHHHHHHhCCCEEEEeeeccccCCCcc
Q 044601 13 SSKQRILLVGEGDFSFSLCL-AREFGFAHNMVATCLDTQETIANK-Y-SNA-VDNVRELEERGCLVFYGVDAMQMSQHFF 88 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aL-a~~~~~~~~l~ATs~ds~~~l~~k-Y-~~a-~~ni~~L~~~g~~V~~gVDAt~L~~~~~ 88 (213)
...++|++||-|.-..-.|. +..++ ..|+- ++..+.+... . +.. ..-.+.|++.|++++.+..++.+.....
T Consensus 141 ~~~~~vvViGgG~~g~E~A~~l~~~g--~~Vtv--v~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~ 216 (410)
T 3ef6_A 141 TSATRLLIVGGGLIGCEVATTARKLG--LSVTI--LEAGDELLVRVLGRRIGAWLRGLLTELGVQVELGTGVVGFSGEGQ 216 (410)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTT--CEEEE--ECSSSSSSHHHHCHHHHHHHHHHHHHHTCEEECSCCEEEEECSSS
T ss_pred ccCCeEEEECCCHHHHHHHHHHHhCC--CeEEE--EecCCccchhhcCHHHHHHHHHHHHHCCCEEEeCCEEEEEeccCc
Confidence 45789999998876555444 22343 34432 2222211111 1 112 2335678889999998877777654311
Q ss_pred -----ccC---CcccEEEEc
Q 044601 89 -----LRT---HKFDRVIYN 100 (213)
Q Consensus 89 -----l~~---~~FDrIiFN 100 (213)
+.. ..+|.||+-
T Consensus 217 ~~~v~~~dg~~i~aD~Vv~a 236 (410)
T 3ef6_A 217 LEQVMASDGRSFVADSALIC 236 (410)
T ss_dssp CCEEEETTSCEEECSEEEEC
T ss_pred EEEEEECCCCEEEcCEEEEe
Confidence 111 347888884
No 381
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=31.11 E-value=2.1e+02 Score=23.11 Aligned_cols=75 Identities=17% Similarity=0.222 Sum_probs=42.3
Q ss_pred CCeEEEEecC---Chh--HHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHh-CCCEEEEeeeccccCCCcc
Q 044601 15 KQRILLVGEG---DFS--FSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEE-RGCLVFYGVDAMQMSQHFF 88 (213)
Q Consensus 15 ~~~ILlVGEG---nFS--FS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~-~g~~V~~gVDAt~L~~~~~ 88 (213)
+++||+.|=+ ..- .+..|+++ +.+|++++.+.. + .+.+++|++ .|....+.+|.++......
T Consensus 21 ~k~vlVTGas~~~gIG~~ia~~l~~~---G~~V~~~~r~~~--~-------~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~ 88 (285)
T 2p91_A 21 GKRALITGVANERSIAYGIAKSFHRE---GAQLAFTYATPK--L-------EKRVREIAKGFGSDLVVKCDVSLDEDIKN 88 (285)
T ss_dssp TCEEEECCCSSTTSHHHHHHHHHHHT---TCEEEEEESSGG--G-------HHHHHHHHHHTTCCCEEECCTTCHHHHHH
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHc---CCEEEEEeCCHH--H-------HHHHHHHHHhcCCeEEEEcCCCCHHHHHH
Confidence 4689999964 333 33334433 568888877642 1 223444543 2433456788887654322
Q ss_pred c------cCCcccEEEEcC
Q 044601 89 L------RTHKFDRVIYNF 101 (213)
Q Consensus 89 l------~~~~FDrIiFNF 101 (213)
+ .....|.||.|=
T Consensus 89 ~~~~~~~~~g~iD~lv~~A 107 (285)
T 2p91_A 89 LKKFLEENWGSLDIIVHSI 107 (285)
T ss_dssp HHHHHHHHTSCCCEEEECC
T ss_pred HHHHHHHHcCCCCEEEECC
Confidence 1 124689888874
No 382
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=30.94 E-value=2.3e+02 Score=24.19 Aligned_cols=120 Identities=21% Similarity=0.263 Sum_probs=66.4
Q ss_pred CCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCCcc
Q 044601 15 KQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTHKF 94 (213)
Q Consensus 15 ~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~~F 94 (213)
.+|||++|=|.. ...+++.+.....|+....+. ++++.+++... -..+|+++...-..+ -...
T Consensus 16 ~mkilvlGaG~v--G~~~~~~L~~~~~v~~~~~~~------------~~~~~~~~~~~--~~~~d~~d~~~l~~~-~~~~ 78 (365)
T 3abi_A 16 HMKVLILGAGNI--GRAIAWDLKDEFDVYIGDVNN------------ENLEKVKEFAT--PLKVDASNFDKLVEV-MKEF 78 (365)
T ss_dssp CCEEEEECCSHH--HHHHHHHHTTTSEEEEEESCH------------HHHHHHTTTSE--EEECCTTCHHHHHHH-HTTC
T ss_pred ccEEEEECCCHH--HHHHHHHHhcCCCeEEEEcCH------------HHHHHHhccCC--cEEEecCCHHHHHHH-HhCC
Confidence 578999998765 455666665555666544432 23444544322 246787765432211 1457
Q ss_pred cEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccCCCCCcccHHhHHHHhCcEEEEEeecC
Q 044601 95 DRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEGDPYNKWELVKKAEKIGLTLQEVVPFC 174 (213)
Q Consensus 95 DrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~~py~~W~i~~lA~~~gl~l~~~~~F~ 174 (213)
|.||-=-|-. .|..++ +..+ +.|.=+|++.. .+-..+.+...|+++|..++-..=|+
T Consensus 79 DvVi~~~p~~-------------~~~~v~-------~~~~--~~g~~yvD~s~-~~~~~~~l~~~a~~~g~~~i~~~G~~ 135 (365)
T 3abi_A 79 ELVIGALPGF-------------LGFKSI-------KAAI--KSKVDMVDVSF-MPENPLELRDEAEKAQVTIVFDAGFA 135 (365)
T ss_dssp SEEEECCCGG-------------GHHHHH-------HHHH--HHTCEEEECCC-CSSCGGGGHHHHHHTTCEEECCCBTT
T ss_pred CEEEEecCCc-------------ccchHH-------HHHH--hcCcceEeeec-cchhhhhhhhhhccCCceeeecCCCC
Confidence 8888543321 232333 2333 25555566653 33456778889999987766544444
No 383
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=30.84 E-value=79 Score=25.40 Aligned_cols=77 Identities=12% Similarity=0.110 Sum_probs=46.6
Q ss_pred CCCeEEEEecCCh---hHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEE-EEeeeccccCCCccc
Q 044601 14 SKQRILLVGEGDF---SFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLV-FYGVDAMQMSQHFFL 89 (213)
Q Consensus 14 ~~~~ILlVGEGnF---SFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V-~~gVDAt~L~~~~~l 89 (213)
+++++|+.|=+.+ ..+..|+++ +.+|+++..+.+ ......++|++.|..+ .+.+|.++......+
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~---G~~V~~~~r~~~--------~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~ 79 (256)
T 3gaf_A 11 NDAVAIVTGAAAGIGRAIAGTFAKA---GASVVVTDLKSE--------GAEAVAAAIRQAGGKAIGLECNVTDEQHREAV 79 (256)
T ss_dssp TTCEEEECSCSSHHHHHHHHHHHHH---TCEEEEEESSHH--------HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC---CCEEEEEeCCHH--------HHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence 3578888886653 344444443 567888877632 1234456677766544 567888886643221
Q ss_pred ------cCCcccEEEEcC
Q 044601 90 ------RTHKFDRVIYNF 101 (213)
Q Consensus 90 ------~~~~FDrIiFNF 101 (213)
...+.|.+|.|=
T Consensus 80 ~~~~~~~~g~id~lv~nA 97 (256)
T 3gaf_A 80 IKAALDQFGKITVLVNNA 97 (256)
T ss_dssp HHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHcCCCCEEEECC
Confidence 124689888773
No 384
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=30.84 E-value=61 Score=25.49 Aligned_cols=79 Identities=18% Similarity=0.176 Sum_probs=44.3
Q ss_pred CCCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEE-EEeeeccccCCCccc-c
Q 044601 14 SKQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLV-FYGVDAMQMSQHFFL-R 90 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V-~~gVDAt~L~~~~~l-~ 90 (213)
++++||+.|=+.+ .-.+|++++ ..+.+|+++..+.. . .....++|+..|..+ .+..|.++......+ .
T Consensus 10 ~~~~vlVtGasgg-iG~~la~~l~~~G~~V~~~~r~~~-~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 80 (255)
T 1fmc_A 10 DGKCAIITGAGAG-IGKEIAITFATAGASVVVSDINAD-A-------ANHVVDEIQQLGGQAFACRCDITSEQELSALAD 80 (255)
T ss_dssp TTCEEEETTTTSH-HHHHHHHHHHTTTCEEEEEESCHH-H-------HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCccH-HHHHHHHHHHHCCCEEEEEcCCHH-H-------HHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHH
Confidence 3578999986543 233444433 23578888877632 1 223345666655433 556788765432211 1
Q ss_pred -----CCcccEEEEcC
Q 044601 91 -----THKFDRVIYNF 101 (213)
Q Consensus 91 -----~~~FDrIiFNF 101 (213)
....|.||.|=
T Consensus 81 ~~~~~~~~~d~vi~~A 96 (255)
T 1fmc_A 81 FAISKLGKVDILVNNA 96 (255)
T ss_dssp HHHHHHSSCCEEEECC
T ss_pred HHHHhcCCCCEEEECC
Confidence 13689888763
No 385
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=30.84 E-value=63 Score=23.87 Aligned_cols=74 Identities=18% Similarity=0.108 Sum_probs=41.2
Q ss_pred CCCeEEEEecCChhHHHHH-HHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHH-hCCCEEEEeeeccccCCCccccC
Q 044601 14 SKQRILLVGEGDFSFSLCL-AREFGFAHNMVATCLDTQETIANKYSNAVDNVRELE-ERGCLVFYGVDAMQMSQHFFLRT 91 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aL-a~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~-~~g~~V~~gVDAt~L~~~~~l~~ 91 (213)
..++|+++|=|.+.-.++. ++.. +..|++...+.+ + ++.++ +.|+.++. .|++..........
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~--g~~V~vid~~~~-----~-------~~~~~~~~g~~~~~-~d~~~~~~l~~~~~ 82 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSS--GHSVVVVDKNEY-----A-------FHRLNSEFSGFTVV-GDAAEFETLKECGM 82 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCGG-----G-------GGGSCTTCCSEEEE-SCTTSHHHHHTTTG
T ss_pred CCCcEEEECCCHHHHHHHHHHHhC--CCeEEEEECCHH-----H-------HHHHHhcCCCcEEE-ecCCCHHHHHHcCc
Confidence 4689999999977655443 2232 457777655421 1 23344 56776544 35544211111112
Q ss_pred CcccEEEEcCC
Q 044601 92 HKFDRVIYNFP 102 (213)
Q Consensus 92 ~~FDrIiFNFP 102 (213)
..+|.||.--|
T Consensus 83 ~~ad~Vi~~~~ 93 (155)
T 2g1u_A 83 EKADMVFAFTN 93 (155)
T ss_dssp GGCSEEEECSS
T ss_pred ccCCEEEEEeC
Confidence 45899988765
No 386
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=30.79 E-value=65 Score=26.27 Aligned_cols=79 Identities=19% Similarity=0.156 Sum_probs=44.8
Q ss_pred CCCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEE-EEeeeccccCCCccc--
Q 044601 14 SKQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLV-FYGVDAMQMSQHFFL-- 89 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V-~~gVDAt~L~~~~~l-- 89 (213)
++++||+.|=+.+ .-+++++.+ ..+.+|+++..+. +. .....++|++.|..+ .+.+|.++......+
T Consensus 21 ~~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~-~~-------~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~ 91 (277)
T 2rhc_B 21 DSEVALVTGATSG-IGLEIARRLGKEGLRVFVCARGE-EG-------LRTTLKELREAGVEADGRTCDVRSVPEIEALVA 91 (277)
T ss_dssp TSCEEEEETCSSH-HHHHHHHHHHHTTCEEEEEESCH-HH-------HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCH-HH-------HHHHHHHHHhcCCceEEEECCCCCHHHHHHHHH
Confidence 3578999986643 223333332 1256888887763 22 223345666666543 567788876533211
Q ss_pred ----cCCcccEEEEcC
Q 044601 90 ----RTHKFDRVIYNF 101 (213)
Q Consensus 90 ----~~~~FDrIiFNF 101 (213)
.....|.||.|=
T Consensus 92 ~~~~~~g~iD~lv~~A 107 (277)
T 2rhc_B 92 AVVERYGPVDVLVNNA 107 (277)
T ss_dssp HHHHHTCSCSEEEECC
T ss_pred HHHHHhCCCCEEEECC
Confidence 124689888774
No 387
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=30.69 E-value=2.1e+02 Score=22.95 Aligned_cols=127 Identities=15% Similarity=0.168 Sum_probs=75.5
Q ss_pred CCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhC-CCEEEEeeeccccCCCccccCC
Q 044601 14 SKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEER-GCLVFYGVDAMQMSQHFFLRTH 92 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~-g~~V~~gVDAt~L~~~~~l~~~ 92 (213)
++.+||=||=|.=.|+..|++. + +..++|.=.... .|.. .+++. .+.+.-..|+..+... .+...
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~-g-~~~V~gvDis~~-ml~~----------a~~~~~~~~~~~~~~~~~~~~~-~~~~~ 102 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQN-G-AKLVYALDVGTN-QLAW----------KIRSDERVVVMEQFNFRNAVLA-DFEQG 102 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-T-CSEEEEECSSCC-CCCH----------HHHTCTTEEEECSCCGGGCCGG-GCCSC
T ss_pred CCCEEEEEccCCCHHHHHHHhc-C-CCEEEEEcCCHH-HHHH----------HHHhCccccccccceEEEeCHh-HcCcC
Confidence 4679999999888899999877 3 347776544432 1111 12221 2333344455444311 11222
Q ss_pred cccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEeccC------------C---CC----Cc
Q 044601 93 KFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKEG------------D---PY----NK 153 (213)
Q Consensus 93 ~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~~------------~---py----~~ 153 (213)
.||.+.|+...... ..++..+..+|+ |+|.+.+..+.. . |. ..
T Consensus 103 ~~d~~~~D~v~~~l-----------------~~~l~~i~rvLk-pgG~lv~~~~p~~e~~~~~~~~~G~~~d~~~~~~~~ 164 (232)
T 3opn_A 103 RPSFTSIDVSFISL-----------------DLILPPLYEILE-KNGEVAALIKPQFEAGREQVGKNGIIRDPKVHQMTI 164 (232)
T ss_dssp CCSEEEECCSSSCG-----------------GGTHHHHHHHSC-TTCEEEEEECHHHHSCHHHHC-CCCCCCHHHHHHHH
T ss_pred CCCEEEEEEEhhhH-----------------HHHHHHHHHhcc-CCCEEEEEECcccccCHHHhCcCCeecCcchhHHHH
Confidence 47888887665431 468888999998 999998864210 0 00 11
Q ss_pred ccHHhHHHHhCcEEEEEee
Q 044601 154 WELVKKAEKIGLTLQEVVP 172 (213)
Q Consensus 154 W~i~~lA~~~gl~l~~~~~ 172 (213)
=++..+++.+||.+.....
T Consensus 165 ~~l~~~l~~aGf~v~~~~~ 183 (232)
T 3opn_A 165 EKVLKTATQLGFSVKGLTF 183 (232)
T ss_dssp HHHHHHHHHHTEEEEEEEE
T ss_pred HHHHHHHHHCCCEEEEEEE
Confidence 1355688899999877653
No 388
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=30.69 E-value=65 Score=26.93 Aligned_cols=92 Identities=21% Similarity=0.162 Sum_probs=54.1
Q ss_pred CCCCCCeEEEEe-cCChhHH-HHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccc-cCCCc
Q 044601 11 HYSSKQRILLVG-EGDFSFS-LCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQ-MSQHF 87 (213)
Q Consensus 11 ~y~~~~~ILlVG-EGnFSFS-~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~-L~~~~ 87 (213)
.-.++++||+.| -|..--. ..||+..| ..+++|+ +.+ +++.++++|+...++.+... +.+.
T Consensus 149 ~~~~g~~vlV~Ga~G~vG~~a~q~a~~~G--a~vi~~~--~~~-----------~~~~~~~lGa~~~i~~~~~~~~~~~- 212 (321)
T 3tqh_A 149 EVKQGDVVLIHAGAGGVGHLAIQLAKQKG--TTVITTA--SKR-----------NHAFLKALGAEQCINYHEEDFLLAI- 212 (321)
T ss_dssp TCCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEE--CHH-----------HHHHHHHHTCSEEEETTTSCHHHHC-
T ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHcC--CEEEEEe--ccc-----------hHHHHHHcCCCEEEeCCCcchhhhh-
Confidence 456789999997 8877544 44577765 4888886 321 14456677886544332222 2211
Q ss_pred cccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEE
Q 044601 88 FLRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHV 143 (213)
Q Consensus 88 ~l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihv 143 (213)
-..+|.|+= .+|.. . +..+.++|+ ++|+|.+
T Consensus 213 ---~~g~D~v~d---~~g~~-----------------~-~~~~~~~l~-~~G~iv~ 243 (321)
T 3tqh_A 213 ---STPVDAVID---LVGGD-----------------V-GIQSIDCLK-ETGCIVS 243 (321)
T ss_dssp ---CSCEEEEEE---SSCHH-----------------H-HHHHGGGEE-EEEEEEE
T ss_pred ---ccCCCEEEE---CCCcH-----------------H-HHHHHHhcc-CCCEEEE
Confidence 145886653 24421 1 245677887 8888754
No 389
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=30.61 E-value=72 Score=25.34 Aligned_cols=78 Identities=13% Similarity=0.139 Sum_probs=43.5
Q ss_pred CCCeEEEEecCChhHHHHHHH-HhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCC--cccc
Q 044601 14 SKQRILLVGEGDFSFSLCLAR-EFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQH--FFLR 90 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~-~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~--~~l~ 90 (213)
..++|++||-|.-..-.|..- .++ .++--..... ... ..-.+.|++.|+.++. ...+.+... ..+.
T Consensus 140 ~~~~v~vvG~G~~~~e~a~~l~~~g---~v~~v~~~~~-----~~~--~~~~~~l~~~gv~i~~-~~v~~i~~~~~v~~~ 208 (297)
T 3fbs_A 140 DQGKIGVIAASPMAIHHALMLPDWG---ETTFFTNGIV-----EPD--ADQHALLAARGVRVET-TRIREIAGHADVVLA 208 (297)
T ss_dssp TTCEEEEECCSTTHHHHHHHGGGTS---EEEEECTTTC-----CCC--HHHHHHHHHTTCEEEC-SCEEEEETTEEEEET
T ss_pred cCCEEEEEecCccHHHHHHHhhhcC---cEEEEECCCC-----CCC--HHHHHHHHHCCcEEEc-ceeeeeecCCeEEeC
Confidence 468999999998876666532 233 4433222211 222 2346788999999863 333333321 1111
Q ss_pred ---CCcccEEEEcCC
Q 044601 91 ---THKFDRVIYNFP 102 (213)
Q Consensus 91 ---~~~FDrIiFNFP 102 (213)
...+|.||+--+
T Consensus 209 ~g~~~~~D~vi~a~G 223 (297)
T 3fbs_A 209 DGRSIALAGLFTQPK 223 (297)
T ss_dssp TSCEEEESEEEECCE
T ss_pred CCCEEEEEEEEEccC
Confidence 235788888653
No 390
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=30.59 E-value=1.4e+02 Score=24.69 Aligned_cols=90 Identities=13% Similarity=0.173 Sum_probs=54.0
Q ss_pred eEEEEec-CChh-HHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCCcc
Q 044601 17 RILLVGE-GDFS-FSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTHKF 94 (213)
Q Consensus 17 ~ILlVGE-GnFS-FS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~~F 94 (213)
+||+.|- |..- ++..||++.| .+|+||+-..+ +++.++++|+...+ |..+......+....+
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~G--a~Vi~~~~~~~------------~~~~~~~lGa~~vi--~~~~~~~~~~~~~~~~ 212 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLG--YQVAAVSGRES------------THGYLKSLGANRIL--SRDEFAESRPLEKQLW 212 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTT--CCEEEEESCGG------------GHHHHHHHTCSEEE--EGGGSSCCCSSCCCCE
T ss_pred eEEEECCCcHHHHHHHHHHHHcC--CEEEEEeCCHH------------HHHHHHhcCCCEEE--ecCCHHHHHhhcCCCc
Confidence 4999997 7664 4455577775 48898875422 24455667876544 4443332222334578
Q ss_pred cEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEE
Q 044601 95 DRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVT 144 (213)
Q Consensus 95 DrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvT 144 (213)
|.| |+. +|. ..+..+..+|+ ++|+|.+.
T Consensus 213 d~v-~d~--~g~------------------~~~~~~~~~l~-~~G~iv~~ 240 (324)
T 3nx4_A 213 AGA-IDT--VGD------------------KVLAKVLAQMN-YGGCVAAC 240 (324)
T ss_dssp EEE-EES--SCH------------------HHHHHHHHTEE-EEEEEEEC
T ss_pred cEE-EEC--CCc------------------HHHHHHHHHHh-cCCEEEEE
Confidence 865 453 342 13566778887 88987554
No 391
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=30.52 E-value=79 Score=25.69 Aligned_cols=77 Identities=14% Similarity=0.173 Sum_probs=45.7
Q ss_pred CCCeEEEEecCCh---hHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCC---EE-EEeeeccccCCC
Q 044601 14 SKQRILLVGEGDF---SFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGC---LV-FYGVDAMQMSQH 86 (213)
Q Consensus 14 ~~~~ILlVGEGnF---SFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~---~V-~~gVDAt~L~~~ 86 (213)
++++||+.|=+.+ ..+..|+++ +.+|+++..+.+ . .....++|++.|. .+ .+.+|.++....
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~---G~~V~~~~r~~~-~-------~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v 78 (281)
T 3svt_A 10 QDRTYLVTGGGSGIGKGVAAGLVAA---GASVMIVGRNPD-K-------LAGAVQELEALGANGGAIRYEPTDITNEDET 78 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESCHH-H-------HHHHHHHHHTTCCSSCEEEEEECCTTSHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC---CCEEEEEeCCHH-H-------HHHHHHHHHHhCCCCceEEEEeCCCCCHHHH
Confidence 4678999986653 334444433 568888876532 1 2344566776654 44 566788876543
Q ss_pred ccc------cCCcccEEEEcC
Q 044601 87 FFL------RTHKFDRVIYNF 101 (213)
Q Consensus 87 ~~l------~~~~FDrIiFNF 101 (213)
..+ ...+.|.+|.|=
T Consensus 79 ~~~~~~~~~~~g~id~lv~nA 99 (281)
T 3svt_A 79 ARAVDAVTAWHGRLHGVVHCA 99 (281)
T ss_dssp HHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHcCCCCEEEECC
Confidence 221 124689888773
No 392
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=30.48 E-value=80 Score=27.98 Aligned_cols=54 Identities=13% Similarity=0.154 Sum_probs=35.8
Q ss_pred cCCCCCCeEEEEec-CChhH-HHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEe
Q 044601 10 NHYSSKQRILLVGE-GDFSF-SLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYG 77 (213)
Q Consensus 10 ~~y~~~~~ILlVGE-GnFSF-S~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~g 77 (213)
....++++||++|- |..-- +..||+..| ..+++++- +. +.++.++++|+....+
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqlak~~G--a~vi~~~~-~~-----------~~~~~~~~lGa~~vi~ 279 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFALAGG--ANPICVVS-SP-----------QKAEICRAMGAEAIID 279 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTT--CEEEEEES-SH-----------HHHHHHHHHTCCEEEE
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcC--CeEEEEEC-CH-----------HHHHHHHhhCCcEEEe
Confidence 34567899999998 87653 444567664 57787763 32 3356677889865543
No 393
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=30.09 E-value=1.8e+02 Score=25.35 Aligned_cols=41 Identities=17% Similarity=0.245 Sum_probs=27.6
Q ss_pred CCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEecc
Q 044601 91 THKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTHKE 147 (213)
Q Consensus 91 ~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl~~ 147 (213)
...||.|++-.|- +..++..-+..+...|. ++++|.+.-.+
T Consensus 98 ~~~~~~v~~~lpk---------------~~~~l~~~L~~l~~~l~-~~~~i~~~g~~ 138 (375)
T 4dcm_A 98 PQQPGVVLIKVPK---------------TLALLEQQLRALRKVVT-SDTRIIAGAKA 138 (375)
T ss_dssp CSSCSEEEEECCS---------------CHHHHHHHHHHHHTTCC-TTSEEEEEEEG
T ss_pred ccCCCEEEEEcCC---------------CHHHHHHHHHHHHhhCC-CCCEEEEEecc
Confidence 3679999998772 22445566667777886 88888555443
No 394
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=30.07 E-value=61 Score=26.73 Aligned_cols=78 Identities=15% Similarity=0.052 Sum_probs=45.9
Q ss_pred CCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCE-EEEeeeccccCCCccc---
Q 044601 15 KQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCL-VFYGVDAMQMSQHFFL--- 89 (213)
Q Consensus 15 ~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~-V~~gVDAt~L~~~~~l--- 89 (213)
++.+|+.|=+.. .-+++++.+ ..+.+|+++..+.. . ..+..++|++.|.. +.+.+|.++......+
T Consensus 28 ~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~-~-------~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~ 98 (283)
T 3v8b_A 28 SPVALITGAGSG-IGRATALALAADGVTVGALGRTRT-E-------VEEVADEIVGAGGQAIALEADVSDELQMRNAVRD 98 (283)
T ss_dssp CCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESSHH-H-------HHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHH-H-------HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence 467899986542 334444433 12568888876632 1 23445667766654 4677888876543221
Q ss_pred ---cCCcccEEEEcC
Q 044601 90 ---RTHKFDRVIYNF 101 (213)
Q Consensus 90 ---~~~~FDrIiFNF 101 (213)
...+.|.+|.|=
T Consensus 99 ~~~~~g~iD~lVnnA 113 (283)
T 3v8b_A 99 LVLKFGHLDIVVANA 113 (283)
T ss_dssp HHHHHSCCCEEEECC
T ss_pred HHHHhCCCCEEEECC
Confidence 124789888874
No 395
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=30.04 E-value=46 Score=28.25 Aligned_cols=97 Identities=15% Similarity=0.207 Sum_probs=54.6
Q ss_pred cCCCCCCeEEEEec-CChhHHH-HHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCC-
Q 044601 10 NHYSSKQRILLVGE-GDFSFSL-CLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQH- 86 (213)
Q Consensus 10 ~~y~~~~~ILlVGE-GnFSFS~-aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~- 86 (213)
..-.++++||+.|- |..--+. .+|++.| .++++|+...+ .++.++++|+....+.+ ..+.+.
T Consensus 155 ~~~~~g~~VlV~Gasg~iG~~~~~~a~~~G--a~Vi~~~~~~~------------~~~~~~~~ga~~v~~~~-~~~~~~v 219 (342)
T 4eye_A 155 GQLRAGETVLVLGAAGGIGTAAIQIAKGMG--AKVIAVVNRTA------------ATEFVKSVGADIVLPLE-EGWAKAV 219 (342)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESSGG------------GHHHHHHHTCSEEEESS-TTHHHHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcC--CEEEEEeCCHH------------HHHHHHhcCCcEEecCc-hhHHHHH
Confidence 34567899999998 7765444 4466665 48999887532 12344556776655444 222211
Q ss_pred ccc-cCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEE
Q 044601 87 FFL-RTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHV 143 (213)
Q Consensus 87 ~~l-~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihv 143 (213)
..+ ....+|.|+=+ +|.. .+..+..+|+ ++|++.+
T Consensus 220 ~~~~~~~g~Dvvid~---~g~~------------------~~~~~~~~l~-~~G~iv~ 255 (342)
T 4eye_A 220 REATGGAGVDMVVDP---IGGP------------------AFDDAVRTLA-SEGRLLV 255 (342)
T ss_dssp HHHTTTSCEEEEEES---CC--------------------CHHHHHHTEE-EEEEEEE
T ss_pred HHHhCCCCceEEEEC---Cchh------------------HHHHHHHhhc-CCCEEEE
Confidence 111 13468877643 3321 1345667776 7787654
No 396
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=29.79 E-value=1.2e+02 Score=25.45 Aligned_cols=95 Identities=16% Similarity=0.140 Sum_probs=55.4
Q ss_pred CCCCCCeEEEEec-CChhHHHH-HHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHH-hCCCEEEEeeecccc---C
Q 044601 11 HYSSKQRILLVGE-GDFSFSLC-LAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELE-ERGCLVFYGVDAMQM---S 84 (213)
Q Consensus 11 ~y~~~~~ILlVGE-GnFSFS~a-La~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~-~~g~~V~~gVDAt~L---~ 84 (213)
...++++||++|= |..-.+.+ +++..| .+|++|+.+. +.++.++ ++|+.... |.++- .
T Consensus 152 ~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G--~~V~~~~~~~------------~~~~~~~~~~g~~~~~--d~~~~~~~~ 215 (345)
T 2j3h_A 152 SPKEGETVYVSAASGAVGQLVGQLAKMMG--CYVVGSAGSK------------EKVDLLKTKFGFDDAF--NYKEESDLT 215 (345)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESSH------------HHHHHHHHTSCCSEEE--ETTSCSCSH
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCC--CEEEEEeCCH------------HHHHHHHHHcCCceEE--ecCCHHHHH
Confidence 4567899999996 76654443 355654 5899887642 2244555 57875443 43321 1
Q ss_pred CC-ccccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEE
Q 044601 85 QH-FFLRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHV 143 (213)
Q Consensus 85 ~~-~~l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihv 143 (213)
+. ..+....+|.||-+- |. .-+..+..+|+ ++|+|.+
T Consensus 216 ~~~~~~~~~~~d~vi~~~---g~------------------~~~~~~~~~l~-~~G~~v~ 253 (345)
T 2j3h_A 216 AALKRCFPNGIDIYFENV---GG------------------KMLDAVLVNMN-MHGRIAV 253 (345)
T ss_dssp HHHHHHCTTCEEEEEESS---CH------------------HHHHHHHTTEE-EEEEEEE
T ss_pred HHHHHHhCCCCcEEEECC---CH------------------HHHHHHHHHHh-cCCEEEE
Confidence 11 011124689887653 31 12556677887 8888754
No 397
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=29.74 E-value=1.8e+02 Score=21.89 Aligned_cols=71 Identities=11% Similarity=0.112 Sum_probs=41.7
Q ss_pred CeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCCcc
Q 044601 16 QRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTHKF 94 (213)
Q Consensus 16 ~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~~F 94 (213)
++||+.|=..|== .+|++.+ ..+..|++.+.+... ++.|. .++.+ ...|.++... ..+ ...
T Consensus 1 MkvlVtGatG~iG-~~l~~~L~~~g~~V~~~~R~~~~------------~~~~~-~~~~~-~~~D~~d~~~-~~~--~~~ 62 (221)
T 3ew7_A 1 MKIGIIGATGRAG-SRILEEAKNRGHEVTAIVRNAGK------------ITQTH-KDINI-LQKDIFDLTL-SDL--SDQ 62 (221)
T ss_dssp CEEEEETTTSHHH-HHHHHHHHHTTCEEEEEESCSHH------------HHHHC-SSSEE-EECCGGGCCH-HHH--TTC
T ss_pred CeEEEEcCCchhH-HHHHHHHHhCCCEEEEEEcCchh------------hhhcc-CCCeE-EeccccChhh-hhh--cCC
Confidence 4799999644422 2333322 235789999887432 22233 45654 4568887665 222 458
Q ss_pred cEEEEcCCcC
Q 044601 95 DRVIYNFPHV 104 (213)
Q Consensus 95 DrIiFNFPH~ 104 (213)
|.||.+-...
T Consensus 63 d~vi~~ag~~ 72 (221)
T 3ew7_A 63 NVVVDAYGIS 72 (221)
T ss_dssp SEEEECCCSS
T ss_pred CEEEECCcCC
Confidence 9999887653
No 398
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=29.67 E-value=1.8e+02 Score=23.38 Aligned_cols=77 Identities=16% Similarity=0.231 Sum_probs=42.9
Q ss_pred CCCeEEEEecC---ChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHh-CCCEEEEeeeccccCCCcc
Q 044601 14 SKQRILLVGEG---DFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEE-RGCLVFYGVDAMQMSQHFF 88 (213)
Q Consensus 14 ~~~~ILlVGEG---nFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~-~g~~V~~gVDAt~L~~~~~ 88 (213)
++++||+.|=+ ..- +++++.+ ..+.+|++++.+.. + .+.+++|++ .|....+.+|.++......
T Consensus 5 ~~k~vlVTGas~~~gIG--~~~a~~l~~~G~~V~~~~r~~~--~-------~~~~~~l~~~~~~~~~~~~D~~~~~~v~~ 73 (275)
T 2pd4_A 5 KGKKGLIVGVANNKSIA--YGIAQSCFNQGATLAFTYLNES--L-------EKRVRPIAQELNSPYVYELDVSKEEHFKS 73 (275)
T ss_dssp TTCEEEEECCCSTTSHH--HHHHHHHHTTTCEEEEEESSTT--T-------HHHHHHHHHHTTCCCEEECCTTCHHHHHH
T ss_pred CCCEEEEECCCCCCcHH--HHHHHHHHHCCCEEEEEeCCHH--H-------HHHHHHHHHhcCCcEEEEcCCCCHHHHHH
Confidence 35789999964 333 3333332 23578888887642 1 123444443 2433456788887654322
Q ss_pred c------cCCcccEEEEcC
Q 044601 89 L------RTHKFDRVIYNF 101 (213)
Q Consensus 89 l------~~~~FDrIiFNF 101 (213)
+ ...+.|.||.|=
T Consensus 74 ~~~~~~~~~g~id~lv~nA 92 (275)
T 2pd4_A 74 LYNSVKKDLGSLDFIVHSV 92 (275)
T ss_dssp HHHHHHHHTSCEEEEEECC
T ss_pred HHHHHHHHcCCCCEEEECC
Confidence 1 124689888874
No 399
>3mtq_A Putative phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) permease...; PTS system fructose IIA component; 1.70A {Klebsiella pneumoniae subsp}
Probab=29.45 E-value=30 Score=27.16 Aligned_cols=41 Identities=15% Similarity=0.383 Sum_probs=27.4
Q ss_pred CCeEEEEecCChhHHHHHHHH----hCCCCeEEEecc--CCHHHHHhhc
Q 044601 15 KQRILLVGEGDFSFSLCLARE----FGFAHNMVATCL--DTQETIANKY 57 (213)
Q Consensus 15 ~~~ILlVGEGnFSFS~aLa~~----~~~~~~l~ATs~--ds~~~l~~kY 57 (213)
...|++++=|+ ||.+|+.. +|...++.|-++ |+.+++.+++
T Consensus 21 ~~~iII~sHG~--~A~gl~~s~~~i~G~~~~v~av~~~~~~~~~~~~~~ 67 (159)
T 3mtq_A 21 KRHYIFASHGS--FANGLLNSVELILGKQPDIHTLCAYVEEEVDLTQQV 67 (159)
T ss_dssp CEEEEEEEETT--HHHHHHHHHHHHHCCCTTEEEEEETSCSSSCHHHHH
T ss_pred CceEEEEeCcH--HHHHHHHHHHHHcCCCCCeEEEECCCCCHHHHHHHH
Confidence 35699999998 78888764 365567777664 3334555543
No 400
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=28.97 E-value=63 Score=25.77 Aligned_cols=79 Identities=19% Similarity=0.230 Sum_probs=44.7
Q ss_pred CCCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEE-EEeeeccccCCCccc-c
Q 044601 14 SKQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLV-FYGVDAMQMSQHFFL-R 90 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V-~~gVDAt~L~~~~~l-~ 90 (213)
++++||+.|=+.+ .-.+|++.+ ..+.+|+++..+. +. ....+++|++.|..+ .+.+|.++......+ +
T Consensus 13 ~~k~vlITGasgg-iG~~la~~l~~~G~~V~~~~r~~-~~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 83 (266)
T 1xq1_A 13 KAKTVLVTGGTKG-IGHAIVEEFAGFGAVIHTCARNE-YE-------LNECLSKWQKKGFQVTGSVCDASLRPEREKLMQ 83 (266)
T ss_dssp TTCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESCH-HH-------HHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHH
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCH-HH-------HHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHH
Confidence 3578999987654 334444433 1256888887653 22 223355666666543 456787765432211 1
Q ss_pred ------CCcccEEEEcC
Q 044601 91 ------THKFDRVIYNF 101 (213)
Q Consensus 91 ------~~~FDrIiFNF 101 (213)
....|.||.|=
T Consensus 84 ~~~~~~~~~id~li~~A 100 (266)
T 1xq1_A 84 TVSSMFGGKLDILINNL 100 (266)
T ss_dssp HHHHHHTTCCSEEEEEC
T ss_pred HHHHHhCCCCcEEEECC
Confidence 15689998874
No 401
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=28.80 E-value=2.5e+02 Score=23.35 Aligned_cols=81 Identities=16% Similarity=0.126 Sum_probs=49.2
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCC-CCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCcccc-
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGF-AHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLR- 90 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~-~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~- 90 (213)
.++++||=||=|.=.++..|++.... ..+|+|.-.|. ++.+ .+.++. ..++++ +.-|+.++.-.....
T Consensus 41 ~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~--~~l~---~a~~~~----~~~v~~-i~~D~~~~~~~~~~~~ 110 (279)
T 3uzu_A 41 ERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDR--DLIG---RLEQRF----GELLEL-HAGDALTFDFGSIARP 110 (279)
T ss_dssp CTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCH--HHHH---HHHHHH----GGGEEE-EESCGGGCCGGGGSCS
T ss_pred CCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCH--HHHH---HHHHhc----CCCcEE-EECChhcCChhHhccc
Confidence 46789999998888888899887532 23488887773 2222 133331 224444 445888875221111
Q ss_pred -CCcccEEEEcCCc
Q 044601 91 -THKFDRVIYNFPH 103 (213)
Q Consensus 91 -~~~FDrIiFNFPH 103 (213)
....++||-|.|-
T Consensus 111 ~~~~~~~vv~NlPY 124 (279)
T 3uzu_A 111 GDEPSLRIIGNLPY 124 (279)
T ss_dssp SSSCCEEEEEECCH
T ss_pred ccCCceEEEEccCc
Confidence 1134689999995
No 402
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=28.36 E-value=2.3e+02 Score=22.69 Aligned_cols=125 Identities=20% Similarity=0.164 Sum_probs=65.8
Q ss_pred CCCeEEEEecCChhHHHHHHHHhC-CCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEE-EEeeeccccCCCcccc-
Q 044601 14 SKQRILLVGEGDFSFSLCLAREFG-FAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLV-FYGVDAMQMSQHFFLR- 90 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~~-~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V-~~gVDAt~L~~~~~l~- 90 (213)
+++++|+.|=+.. .-+++++.+. .+.+|+.+.....+. ....+..++|++.|..+ .+.+|.++......+-
T Consensus 10 ~~k~vlVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~ 83 (262)
T 3ksu_A 10 KNKVIVIAGGIKN-LGALTAKTFALESVNLVLHYHQAKDS-----DTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFD 83 (262)
T ss_dssp TTCEEEEETCSSH-HHHHHHHHHTTSSCEEEEEESCGGGH-----HHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHH
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCCEEEEEecCccCH-----HHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHH
Confidence 3578888886543 4556666552 356788876543211 01234466777777765 5678988876443221
Q ss_pred -----CCcccEEEEcCCcCCCccccc-----chHHHHhhHHHHHHHHHHHHhhcccCCCeEEEEe
Q 044601 91 -----THKFDRVIYNFPHVGFIFREN-----SYCQIQLNKELVKGFLRNAKLLLKEENGEIHVTH 145 (213)
Q Consensus 91 -----~~~FDrIiFNFPH~G~~~~e~-----~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvTl 145 (213)
..+.|.+|.|==-......++ -.+.+..|-.-.....+.+.+.++ ..|.|....
T Consensus 84 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~-~~g~iv~is 147 (262)
T 3ksu_A 84 FAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMN-PNGHIITIA 147 (262)
T ss_dssp HHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEE-EEEEEEEEC
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhc-CCCEEEEEe
Confidence 246898887732221111111 123333343333334444555665 677765543
No 403
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=27.91 E-value=93 Score=25.34 Aligned_cols=78 Identities=13% Similarity=0.159 Sum_probs=43.3
Q ss_pred CCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHh-----CCC-EEEEeeeccccCCCc
Q 044601 15 KQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEE-----RGC-LVFYGVDAMQMSQHF 87 (213)
Q Consensus 15 ~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~-----~g~-~V~~gVDAt~L~~~~ 87 (213)
+++||+.|=+.+ .-.++++.+ ..+.+|++++.+.. .+ ....++|++ .+. ...+.+|.++.....
T Consensus 18 ~k~vlVTGasgg-IG~~la~~l~~~G~~V~~~~r~~~-~~-------~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~ 88 (303)
T 1yxm_A 18 GQVAIVTGGATG-IGKAIVKELLELGSNVVIASRKLE-RL-------KSAADELQANLPPTKQARVIPIQCNIRNEEEVN 88 (303)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHH-HH-------HHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHH
T ss_pred CCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCHH-HH-------HHHHHHHHhhccccCCccEEEEecCCCCHHHHH
Confidence 578999986544 233444433 12568888877632 21 223445554 343 346678888765432
Q ss_pred cc-c-----CCcccEEEEcC
Q 044601 88 FL-R-----THKFDRVIYNF 101 (213)
Q Consensus 88 ~l-~-----~~~FDrIiFNF 101 (213)
.+ . ....|.||.|=
T Consensus 89 ~~~~~~~~~~g~id~li~~A 108 (303)
T 1yxm_A 89 NLVKSTLDTFGKINFLVNNG 108 (303)
T ss_dssp HHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHcCCCCEEEECC
Confidence 21 1 13689888773
No 404
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=27.85 E-value=1.3e+02 Score=26.28 Aligned_cols=53 Identities=15% Similarity=0.254 Sum_probs=34.5
Q ss_pred cCCCCCCeEEEEec-CChhH-HHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEE
Q 044601 10 NHYSSKQRILLVGE-GDFSF-SLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFY 76 (213)
Q Consensus 10 ~~y~~~~~ILlVGE-GnFSF-S~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~ 76 (213)
....++++||+.|- |..-- +..||++.| ..+++|+- +. +.++.++++|+....
T Consensus 216 ~~~~~g~~VlV~GasG~iG~~a~qla~~~G--a~vi~~~~-~~-----------~~~~~~~~lGa~~~i 270 (447)
T 4a0s_A 216 AQMKQGDIVLIWGASGGLGSYAIQFVKNGG--GIPVAVVS-SA-----------QKEAAVRALGCDLVI 270 (447)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTT--CEEEEEES-SH-----------HHHHHHHHTTCCCEE
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcC--CEEEEEeC-CH-----------HHHHHHHhcCCCEEE
Confidence 45677899999997 77654 444466664 57788763 32 234556778886543
No 405
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=27.76 E-value=1.2e+02 Score=24.55 Aligned_cols=78 Identities=15% Similarity=0.152 Sum_probs=45.0
Q ss_pred CCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEE-EEeeeccccCCCccc---
Q 044601 15 KQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLV-FYGVDAMQMSQHFFL--- 89 (213)
Q Consensus 15 ~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V-~~gVDAt~L~~~~~l--- 89 (213)
+++||+.|=+.+ .-.+|++.+ ..+.+|+++..+ .+. .....+.|++.|..+ .+.+|.++......+
T Consensus 44 ~k~vlITGasgg-IG~~la~~L~~~G~~V~~~~r~-~~~-------~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~ 114 (285)
T 2c07_A 44 NKVALVTGAGRG-IGREIAKMLAKSVSHVICISRT-QKS-------CDSVVDEIKSFGYESSGYAGDVSKKEEISEVINK 114 (285)
T ss_dssp SCEEEEESTTSH-HHHHHHHHHTTTSSEEEEEESS-HHH-------HHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEECCCcH-HHHHHHHHHHHcCCEEEEEcCC-HHH-------HHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHH
Confidence 478999986643 344555554 235688886544 222 223345666666544 567888876543221
Q ss_pred ---cCCcccEEEEcC
Q 044601 90 ---RTHKFDRVIYNF 101 (213)
Q Consensus 90 ---~~~~FDrIiFNF 101 (213)
.....|.||.|=
T Consensus 115 ~~~~~~~id~li~~A 129 (285)
T 2c07_A 115 ILTEHKNVDILVNNA 129 (285)
T ss_dssp HHHHCSCCCEEEECC
T ss_pred HHHhcCCCCEEEECC
Confidence 124689888773
No 406
>2qip_A Protein of unknown function VPA0982; APC85975, vibrio parahaemolyticus RIMD 2210633, STR genomics, PSI-2, protein structure initiative; 1.48A {Vibrio parahaemolyticus}
Probab=27.72 E-value=42 Score=25.83 Aligned_cols=29 Identities=24% Similarity=0.441 Sum_probs=18.9
Q ss_pred CeEEEEecCChhHHHHHHHH-hCCCCeEEE
Q 044601 16 QRILLVGEGDFSFSLCLARE-FGFAHNMVA 44 (213)
Q Consensus 16 ~~ILlVGEGnFSFS~aLa~~-~~~~~~l~A 44 (213)
.=||+=|||||.=.+.-++. +|..+.+++
T Consensus 111 ~~vLvSgD~DF~plv~~lr~~~G~~V~v~g 140 (165)
T 2qip_A 111 RVILVSGDGDFSLLVERIQQRYNKKVTVYG 140 (165)
T ss_dssp EEEEECCCGGGHHHHHHHHHHHCCEEEEEE
T ss_pred EEEEEECChhHHHHHHHHHHHcCcEEEEEe
Confidence 44667788888887777777 564433333
No 407
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=27.67 E-value=84 Score=25.72 Aligned_cols=78 Identities=12% Similarity=0.118 Sum_probs=44.2
Q ss_pred CCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCE-EEEeeeccccCCCccc---
Q 044601 15 KQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCL-VFYGVDAMQMSQHFFL--- 89 (213)
Q Consensus 15 ~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~-V~~gVDAt~L~~~~~l--- 89 (213)
++++|+.|=+. ---+++++.+ ..+.+|+++..+.. ......++|++.|.. ..+..|.++......+
T Consensus 33 gk~~lVTGas~-GIG~aia~~la~~G~~V~~~~r~~~--------~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~ 103 (275)
T 4imr_A 33 GRTALVTGSSR-GIGAAIAEGLAGAGAHVILHGVKPG--------STAAVQQRIIASGGTAQELAGDLSEAGAGTDLIER 103 (275)
T ss_dssp TCEEEETTCSS-HHHHHHHHHHHHTTCEEEEEESSTT--------TTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHH
T ss_pred CCEEEEECCCC-HHHHHHHHHHHHCCCEEEEEcCCHH--------HHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHH
Confidence 47788888543 2233333332 12568888887642 122334556665543 4677888876543221
Q ss_pred --cCCcccEEEEcC
Q 044601 90 --RTHKFDRVIYNF 101 (213)
Q Consensus 90 --~~~~FDrIiFNF 101 (213)
...+.|.+|.|=
T Consensus 104 ~~~~g~iD~lvnnA 117 (275)
T 4imr_A 104 AEAIAPVDILVINA 117 (275)
T ss_dssp HHHHSCCCEEEECC
T ss_pred HHHhCCCCEEEECC
Confidence 114789888773
No 408
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=27.54 E-value=2.2e+02 Score=22.80 Aligned_cols=74 Identities=20% Similarity=0.291 Sum_probs=39.6
Q ss_pred CCCeEEEEe---cCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHH-HhCCC-EEEEeeeccccCCCc
Q 044601 14 SKQRILLVG---EGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVREL-EERGC-LVFYGVDAMQMSQHF 87 (213)
Q Consensus 14 ~~~~ILlVG---EGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L-~~~g~-~V~~gVDAt~L~~~~ 87 (213)
++++||+.| -|..-.+.+ +.+ ..+.+|+++..+....+ +++ ++.+. ...+.+|.++.....
T Consensus 6 ~~k~vlVTGa~~s~gIG~aia--~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~~~~~~~~~~Dv~~~~~v~ 72 (269)
T 2h7i_A 6 DGKRILVSGIITDSSIAFHIA--RVAQEQGAQLVLTGFDRLRLI-----------QRITDRLPAKAPLLELDVQNEEHLA 72 (269)
T ss_dssp TTCEEEECCCSSTTSHHHHHH--HHHHHTTCEEEEEECSCHHHH-----------HHHHTTSSSCCCEEECCTTCHHHHH
T ss_pred CCCEEEEECCCCCCchHHHHH--HHHHHCCCEEEEEecChHHHH-----------HHHHHhcCCCceEEEccCCCHHHHH
Confidence 357899999 455443333 322 12578888887754321 111 11232 234567888765432
Q ss_pred cc-c-----CC---cccEEEEc
Q 044601 88 FL-R-----TH---KFDRVIYN 100 (213)
Q Consensus 88 ~l-~-----~~---~FDrIiFN 100 (213)
.+ . .. ..|.+|.|
T Consensus 73 ~~~~~~~~~~g~~~~iD~lv~n 94 (269)
T 2h7i_A 73 SLAGRVTEAIGAGNKLDGVVHS 94 (269)
T ss_dssp HHHHHHHHHHCTTCCEEEEEEC
T ss_pred HHHHHHHHHhCCCCCceEEEEC
Confidence 21 1 12 78988877
No 409
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=27.52 E-value=1.4e+02 Score=20.01 Aligned_cols=73 Identities=21% Similarity=0.189 Sum_probs=40.1
Q ss_pred CCeEEEEecCChhHHHHHH-HHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCCc
Q 044601 15 KQRILLVGEGDFSFSLCLA-REFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTHK 93 (213)
Q Consensus 15 ~~~ILlVGEGnFSFS~aLa-~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~~ 93 (213)
.++||++|=|..--+.+.. ...+ ...|++...+. +.++.+...|+.+ ..+|.+........ -..
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g-~~~v~~~~r~~------------~~~~~~~~~~~~~-~~~d~~~~~~~~~~-~~~ 69 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSS-NYSVTVADHDL------------AALAVLNRMGVAT-KQVDAKDEAGLAKA-LGG 69 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCS-SEEEEEEESCH------------HHHHHHHTTTCEE-EECCTTCHHHHHHH-TTT
T ss_pred cCeEEEECCCHHHHHHHHHHHhCC-CceEEEEeCCH------------HHHHHHHhCCCcE-EEecCCCHHHHHHH-HcC
Confidence 4689999997654443321 1222 26787776642 1233444567765 44566653321111 135
Q ss_pred ccEEEEcCC
Q 044601 94 FDRVIYNFP 102 (213)
Q Consensus 94 FDrIiFNFP 102 (213)
.|.||..-|
T Consensus 70 ~d~vi~~~~ 78 (118)
T 3ic5_A 70 FDAVISAAP 78 (118)
T ss_dssp CSEEEECSC
T ss_pred CCEEEECCC
Confidence 898887765
No 410
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=27.49 E-value=71 Score=25.03 Aligned_cols=77 Identities=13% Similarity=0.116 Sum_probs=42.5
Q ss_pred CCCeEEEEecCCh---hHHHHHHHHhCCCCeEEEe-ccCCHHHHHhhcchHHHHHHHHHhCCCEE-EEeeeccccCCCcc
Q 044601 14 SKQRILLVGEGDF---SFSLCLAREFGFAHNMVAT-CLDTQETIANKYSNAVDNVRELEERGCLV-FYGVDAMQMSQHFF 88 (213)
Q Consensus 14 ~~~~ILlVGEGnF---SFS~aLa~~~~~~~~l~AT-s~ds~~~l~~kY~~a~~ni~~L~~~g~~V-~~gVDAt~L~~~~~ 88 (213)
++++||+.|=+.+ ..+..|+++ +.+|+++ ..+. +. .....+.|++.|..+ .+.+|.++......
T Consensus 4 ~~~~vlItGasggiG~~~a~~l~~~---G~~V~~~~~r~~-~~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 72 (247)
T 2hq1_A 4 KGKTAIVTGSSRGLGKAIAWKLGNM---GANIVLNGSPAS-TS-------LDATAEEFKAAGINVVVAKGDVKNPEDVEN 72 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHT---TCEEEEEECTTC-SH-------HHHHHHHHHHTTCCEEEEESCTTSHHHHHH
T ss_pred CCcEEEEECCCchHHHHHHHHHHHC---CCEEEEEcCcCH-HH-------HHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence 3578999986644 333334432 5678887 3332 11 223345566666543 56788887553221
Q ss_pred c-c-----CCcccEEEEcC
Q 044601 89 L-R-----THKFDRVIYNF 101 (213)
Q Consensus 89 l-~-----~~~FDrIiFNF 101 (213)
+ . ....|.||.|=
T Consensus 73 ~~~~~~~~~~~~d~vi~~A 91 (247)
T 2hq1_A 73 MVKTAMDAFGRIDILVNNA 91 (247)
T ss_dssp HHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHhcCCCCEEEECC
Confidence 1 1 13689888773
No 411
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=27.47 E-value=95 Score=24.66 Aligned_cols=53 Identities=4% Similarity=0.053 Sum_probs=41.6
Q ss_pred CeEEEEecCChhHHHHHH-HHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEe
Q 044601 16 QRILLVGEGDFSFSLCLA-REFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYG 77 (213)
Q Consensus 16 ~~ILlVGEGnFSFS~aLa-~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~g 77 (213)
.+|-+||=+|....+... ..+ +..|.--++++++++ ..-+++|++.|+.|+-|
T Consensus 95 ~kIavvg~~~~~~~~~~~~~ll--~~~i~~~~~~~~~e~-------~~~i~~l~~~G~~vvVG 148 (196)
T 2q5c_A 95 NELALIAYKHSIVDKHEIEAML--GVKIKEFLFSSEDEI-------TTLISKVKTENIKIVVS 148 (196)
T ss_dssp SEEEEEEESSCSSCHHHHHHHH--TCEEEEEEECSGGGH-------HHHHHHHHHTTCCEEEE
T ss_pred CcEEEEeCcchhhHHHHHHHHh--CCceEEEEeCCHHHH-------HHHHHHHHHCCCeEEEC
Confidence 499999999998887654 445 567888888888755 34589999999988777
No 412
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=27.45 E-value=1.1e+02 Score=24.78 Aligned_cols=81 Identities=15% Similarity=0.134 Sum_probs=45.1
Q ss_pred CCeEEEEec-CChhHHH--HHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccC
Q 044601 15 KQRILLVGE-GDFSFSL--CLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRT 91 (213)
Q Consensus 15 ~~~ILlVGE-GnFSFS~--aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~ 91 (213)
.++||++|= |..--++ .|++ .+..|++.+.+.... -|+....++.|+..|+.++ ..|.++....... -
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~---~g~~V~~~~R~~~~~----~~~~~~~~~~~~~~~~~~~-~~D~~d~~~l~~~-~ 74 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASIS---LGHPTYVLFRPEVVS----NIDKVQMLLYFKQLGAKLI-EASLDDHQRLVDA-L 74 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHH---TTCCEEEECCSCCSS----CHHHHHHHHHHHTTTCEEE-CCCSSCHHHHHHH-H
T ss_pred CCEEEEEcCCcHHHHHHHHHHHh---CCCcEEEEECCCccc----chhHHHHHHHHHhCCeEEE-eCCCCCHHHHHHH-H
Confidence 478999995 5543332 2332 257888888874210 0122234556666788765 4577664322111 1
Q ss_pred CcccEEEEcCCcC
Q 044601 92 HKFDRVIYNFPHV 104 (213)
Q Consensus 92 ~~FDrIiFNFPH~ 104 (213)
...|.||.+-+..
T Consensus 75 ~~~d~vi~~a~~~ 87 (313)
T 1qyd_A 75 KQVDVVISALAGG 87 (313)
T ss_dssp TTCSEEEECCCCS
T ss_pred hCCCEEEECCccc
Confidence 3489988776544
No 413
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=27.35 E-value=52 Score=30.63 Aligned_cols=40 Identities=13% Similarity=0.140 Sum_probs=25.8
Q ss_pred CCCCCeEEEEecCChhHHHH-HHHHhCCCCeEEEeccCCHH
Q 044601 12 YSSKQRILLVGEGDFSFSLC-LAREFGFAHNMVATCLDTQE 51 (213)
Q Consensus 12 y~~~~~ILlVGEGnFSFS~a-La~~~~~~~~l~ATs~ds~~ 51 (213)
+-.++|+.+.||++..++++ |++.+|-.+..++|.+...+
T Consensus 332 ~l~GKrv~i~~~~~~~~~l~~~l~ElGm~vv~~~t~~~~~~ 372 (533)
T 1mio_A 332 KLQGKTACLYVGGSRSHTYMNMLKSFGVDSLVAGFEFAHRD 372 (533)
T ss_dssp HHTTCEEEEEESSSHHHHHHHHHHHHTCEEEEEEESSCCHH
T ss_pred HhCCCEEEEECCchHHHHHHHHHHHCCCEEEEEEeccCcch
Confidence 44689999999998877765 24566644444445554333
No 414
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=27.18 E-value=65 Score=25.78 Aligned_cols=79 Identities=16% Similarity=0.108 Sum_probs=44.7
Q ss_pred CCCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEE-EEeeeccccCCCccc--
Q 044601 14 SKQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLV-FYGVDAMQMSQHFFL-- 89 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V-~~gVDAt~L~~~~~l-- 89 (213)
++++||+.|=+.+ .-.++++.+ ..+.+|++++.+.+ . .....++|++.|..+ .+.+|.++......+
T Consensus 13 ~~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~-~-------~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~ 83 (260)
T 2zat_A 13 ENKVALVTASTDG-IGLAIARRLAQDGAHVVVSSRKQE-N-------VDRTVATLQGEGLSVTGTVCHVGKAEDRERLVA 83 (260)
T ss_dssp TTCEEEESSCSSH-HHHHHHHHHHHTTCEEEEEESCHH-H-------HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCHH-H-------HHHHHHHHHhcCCceEEEEccCCCHHHHHHHHH
Confidence 3578999986653 233333332 12568888877632 2 223345666666544 456788775533211
Q ss_pred ----cCCcccEEEEcC
Q 044601 90 ----RTHKFDRVIYNF 101 (213)
Q Consensus 90 ----~~~~FDrIiFNF 101 (213)
.....|.||.|=
T Consensus 84 ~~~~~~g~iD~lv~~A 99 (260)
T 2zat_A 84 MAVNLHGGVDILVSNA 99 (260)
T ss_dssp HHHHHHSCCCEEEECC
T ss_pred HHHHHcCCCCEEEECC
Confidence 114689888874
No 415
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=27.15 E-value=30 Score=30.85 Aligned_cols=34 Identities=21% Similarity=0.321 Sum_probs=28.5
Q ss_pred chHHHHhhHHH--HHHHHHHHHhhcccCCCeEEEEec
Q 044601 112 SYCQIQLNKEL--VKGFLRNAKLLLKEENGEIHVTHK 146 (213)
Q Consensus 112 ~~~~i~~n~~L--l~~Ff~Sa~~~L~~~~G~ihvTl~ 146 (213)
|.-.|.-|++| |..++..|..+|+ ++|++.|-..
T Consensus 240 QALRI~VN~EL~~L~~~L~~a~~~L~-~gGRl~VISF 275 (347)
T 3tka_A 240 QAVRIWVNSELEEIEQALKSSLNVLA-PGGRLSIISF 275 (347)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHEE-EEEEEEEEES
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC-CCCEEEEEec
Confidence 55667789988 9999999999998 9999777643
No 416
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=27.11 E-value=44 Score=27.21 Aligned_cols=64 Identities=9% Similarity=0.181 Sum_probs=36.9
Q ss_pred CCCeEEEEecCChhHHHHHH-HHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhC-CCEEEEeeeccccCC
Q 044601 14 SKQRILLVGEGDFSFSLCLA-REFGFAHNMVATCLDTQETIANKYSNAVDNVRELEER-GCLVFYGVDAMQMSQ 85 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa-~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~-g~~V~~gVDAt~L~~ 85 (213)
..++|++||-|.-..-.|.. ... +..|+--.... .+. ....-.+.|++. |+.++.+..++.+..
T Consensus 172 ~~~~v~vvG~G~~g~e~a~~l~~~--g~~v~~v~~~~--~~~----~~~~~~~~l~~~~gv~i~~~~~v~~i~~ 237 (338)
T 3itj_A 172 RNKPLAVIGGGDSACEEAQFLTKY--GSKVFMLVRKD--HLR----ASTIMQKRAEKNEKIEILYNTVALEAKG 237 (338)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTT--SSEEEEECSSS--SCC----SCHHHHHHHHHCTTEEEECSEEEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhc--CCEEEEEEcCC--ccC----CCHHHHHHHHhcCCeEEeecceeEEEEc
Confidence 47899999988765554442 222 34444332221 111 123446677665 999998877666653
No 417
>2gk3_A Putative cytoplasmic protein; STM3548, structural genomics, PSI, P structure initiative; 2.25A {Salmonella typhimurium} SCOP: c.23.16.9
Probab=26.82 E-value=97 Score=25.53 Aligned_cols=43 Identities=16% Similarity=0.146 Sum_probs=22.0
Q ss_pred HHHHHHHHHhCCCEEEEeeeccccCCCcc---ccCCcccEEEEc-CCc
Q 044601 60 AVDNVRELEERGCLVFYGVDAMQMSQHFF---LRTHKFDRVIYN-FPH 103 (213)
Q Consensus 60 a~~ni~~L~~~g~~V~~gVDAt~L~~~~~---l~~~~FDrIiFN-FPH 103 (213)
+..-.+.|++.|+.|-|- .+....+.++ ..-..||.||+. .|.
T Consensus 42 ~~~l~~aL~~~~~~v~~~-~~~~~~~~fp~~~~~L~~yDvIIl~~~~~ 88 (256)
T 2gk3_A 42 ATWLLECLRKGGVDIDYM-PAHTVQIAFPESIDELNRYDVIVISDIGS 88 (256)
T ss_dssp CHHHHHHHHHTTCEEEEE-CHHHHHHCCCCSHHHHHTCSEEEEESCCH
T ss_pred HHHHHHHHHhcCceEEEE-ecccchhhCCcChhHHhcCCEEEEeCCch
Confidence 344556888877766552 1110001121 112569999986 554
No 418
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=26.74 E-value=1e+02 Score=28.09 Aligned_cols=72 Identities=25% Similarity=0.307 Sum_probs=41.5
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhC-CCCeEEEeccCCHHHHHhhcchHHHHHHHHHhC-CCEEEEeeeccccCCCcccc
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFG-FAHNMVATCLDTQETIANKYSNAVDNVRELEER-GCLVFYGVDAMQMSQHFFLR 90 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~-~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~-g~~V~~gVDAt~L~~~~~l~ 90 (213)
...++|+++|-|.+. ..+++.+. .+..+++-..|. +.++.+++. |+.+++| ||++.+.-....
T Consensus 125 ~~~~hviI~G~g~~g--~~la~~L~~~~~~vvvid~~~------------~~~~~~~~~~~~~~i~G-d~~~~~~L~~a~ 189 (565)
T 4gx0_A 125 DTRGHILIFGIDPIT--RTLIRKLESRNHLFVVVTDNY------------DQALHLEEQEGFKVVYG-SPTDAHVLAGLR 189 (565)
T ss_dssp TCCSCEEEESCCHHH--HHHHHHTTTTTCCEEEEESCH------------HHHHHHHHSCSSEEEES-CTTCHHHHHHTT
T ss_pred ccCCeEEEECCChHH--HHHHHHHHHCCCCEEEEECCH------------HHHHHHHHhcCCeEEEe-CCCCHHHHHhcC
Confidence 446899999999754 55566553 244555543331 234556666 7777765 776654322223
Q ss_pred CCcccEEEE
Q 044601 91 THKFDRVIY 99 (213)
Q Consensus 91 ~~~FDrIiF 99 (213)
-...|.||-
T Consensus 190 i~~a~~vi~ 198 (565)
T 4gx0_A 190 VAAARSIIA 198 (565)
T ss_dssp GGGCSEEEE
T ss_pred cccCCEEEE
Confidence 345666664
No 419
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=26.74 E-value=85 Score=25.05 Aligned_cols=78 Identities=22% Similarity=0.216 Sum_probs=44.0
Q ss_pred CCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCE-EEEeeeccccCCCccc---
Q 044601 15 KQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCL-VFYGVDAMQMSQHFFL--- 89 (213)
Q Consensus 15 ~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~-V~~gVDAt~L~~~~~l--- 89 (213)
+++||+.|=+.+ .-+++++.+ ..+.+|++++.+. +. .....++|++.|.. ..+.+|.++......+
T Consensus 2 ~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~-~~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~ 72 (256)
T 1geg_A 2 KKVALVTGAGQG-IGKAIALRLVKDGFAVAIADYND-AT-------AKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQ 72 (256)
T ss_dssp CCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCH-HH-------HHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHH
T ss_pred CCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEeCCH-HH-------HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence 357889886543 234444433 1256888887753 22 12334556665643 4567888876543221
Q ss_pred ---cCCcccEEEEcC
Q 044601 90 ---RTHKFDRVIYNF 101 (213)
Q Consensus 90 ---~~~~FDrIiFNF 101 (213)
.....|.||.|=
T Consensus 73 ~~~~~g~id~lv~nA 87 (256)
T 1geg_A 73 ARKTLGGFDVIVNNA 87 (256)
T ss_dssp HHHHTTCCCEEEECC
T ss_pred HHHHhCCCCEEEECC
Confidence 124689888874
No 420
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=26.54 E-value=32 Score=29.82 Aligned_cols=33 Identities=33% Similarity=0.451 Sum_probs=27.9
Q ss_pred chHHHHhhHHH--HHHHHHHHHhhcccCCCeEEEEe
Q 044601 112 SYCQIQLNKEL--VKGFLRNAKLLLKEENGEIHVTH 145 (213)
Q Consensus 112 ~~~~i~~n~~L--l~~Ff~Sa~~~L~~~~G~ihvTl 145 (213)
|.-.|.-|++| |..++..|..+|+ ++|++.|-.
T Consensus 199 QAlRI~VN~EL~~L~~~L~~a~~~L~-~gGrl~vis 233 (285)
T 1wg8_A 199 QALRIYVNDELNALKEFLEQAAEVLA-PGGRLVVIA 233 (285)
T ss_dssp HHHHHHHTTHHHHHHHHHHHHHHHEE-EEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEEe
Confidence 55567779988 9999999999998 999987654
No 421
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=26.52 E-value=93 Score=24.31 Aligned_cols=77 Identities=22% Similarity=0.241 Sum_probs=42.9
Q ss_pred CCeEEEEecCCh---hHHHHHHHHhCCC-----CeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEE-EEeeeccccCC
Q 044601 15 KQRILLVGEGDF---SFSLCLAREFGFA-----HNMVATCLDTQETIANKYSNAVDNVRELEERGCLV-FYGVDAMQMSQ 85 (213)
Q Consensus 15 ~~~ILlVGEGnF---SFS~aLa~~~~~~-----~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V-~~gVDAt~L~~ 85 (213)
+++||+.|=+.+ ..+..|+++ |.. ..|+++..+. +.+ ....++|+..|..+ .+.+|.++...
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~-G~~~~~~~~~V~~~~r~~-~~~-------~~~~~~~~~~~~~~~~~~~D~~~~~~ 72 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARA-ARHHPDFEPVLVLSSRTA-ADL-------EKISLECRAEGALTDTITADISDMAD 72 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHH-TTTCTTCCEEEEEEESCH-HHH-------HHHHHHHHTTTCEEEEEECCTTSHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHh-cCcccccceEEEEEeCCH-HHH-------HHHHHHHHccCCeeeEEEecCCCHHH
Confidence 457899986654 344444443 211 1788887653 221 22345566656554 56788887653
Q ss_pred Cccc------cCCcccEEEEc
Q 044601 86 HFFL------RTHKFDRVIYN 100 (213)
Q Consensus 86 ~~~l------~~~~FDrIiFN 100 (213)
...+ .....|.||.|
T Consensus 73 v~~~~~~~~~~~g~id~li~~ 93 (244)
T 2bd0_A 73 VRRLTTHIVERYGHIDCLVNN 93 (244)
T ss_dssp HHHHHHHHHHHTSCCSEEEEC
T ss_pred HHHHHHHHHHhCCCCCEEEEc
Confidence 2211 12468988877
No 422
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=26.14 E-value=39 Score=29.25 Aligned_cols=51 Identities=10% Similarity=0.141 Sum_probs=33.8
Q ss_pred CCCCeEEEE--ecCChh-HHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEe
Q 044601 13 SSKQRILLV--GEGDFS-FSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYG 77 (213)
Q Consensus 13 ~~~~~ILlV--GEGnFS-FS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~g 77 (213)
.++++||++ |-|..- .+..||++.| .+|+||+-.. +.++.++++|+...++
T Consensus 169 ~~g~~vlV~gag~G~vG~~a~q~a~~~G--a~Vi~~~~~~------------~~~~~~~~lGa~~~~~ 222 (379)
T 3iup_A 169 LEGHSALVHTAAASNLGQMLNQICLKDG--IKLVNIVRKQ------------EQADLLKAQGAVHVCN 222 (379)
T ss_dssp HTTCSCEEESSTTSHHHHHHHHHHHHHT--CCEEEEESSH------------HHHHHHHHTTCSCEEE
T ss_pred cCCCEEEEECCCCCHHHHHHHHHHHHCC--CEEEEEECCH------------HHHHHHHhCCCcEEEe
Confidence 467899999 677664 4555688876 4788887431 2355667788764433
No 423
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=26.07 E-value=57 Score=27.53 Aligned_cols=76 Identities=12% Similarity=0.119 Sum_probs=42.4
Q ss_pred cCCCCCCeEEEEecC-Chh-HHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCc
Q 044601 10 NHYSSKQRILLVGEG-DFS-FSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHF 87 (213)
Q Consensus 10 ~~y~~~~~ILlVGEG-nFS-FS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~ 87 (213)
....++++||++|-| ..- .+..||++.| .+|++|+...+ .++.++++|+...++.+...+.+..
T Consensus 140 ~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~G--a~Vi~~~~~~~------------~~~~~~~lga~~~~~~~~~~~~~~~ 205 (340)
T 3gms_A 140 LNLQRNDVLLVNACGSAIGHLFAQLSQILN--FRLIAVTRNNK------------HTEELLRLGAAYVIDTSTAPLYETV 205 (340)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHHT--CEEEEEESSST------------THHHHHHHTCSEEEETTTSCHHHHH
T ss_pred cccCCCCEEEEeCCccHHHHHHHHHHHHcC--CEEEEEeCCHH------------HHHHHHhCCCcEEEeCCcccHHHHH
Confidence 345678999999987 343 3445577775 48888876532 1334455677655433222221110
Q ss_pred -c-ccCCcccEEEE
Q 044601 88 -F-LRTHKFDRVIY 99 (213)
Q Consensus 88 -~-l~~~~FDrIiF 99 (213)
. .....+|.||=
T Consensus 206 ~~~~~~~g~Dvvid 219 (340)
T 3gms_A 206 MELTNGIGADAAID 219 (340)
T ss_dssp HHHTTTSCEEEEEE
T ss_pred HHHhCCCCCcEEEE
Confidence 0 12346887754
No 424
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=25.93 E-value=1.1e+02 Score=24.62 Aligned_cols=78 Identities=14% Similarity=0.143 Sum_probs=44.7
Q ss_pred CCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEE-EEeeeccccCCCccc---
Q 044601 15 KQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLV-FYGVDAMQMSQHFFL--- 89 (213)
Q Consensus 15 ~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V-~~gVDAt~L~~~~~l--- 89 (213)
++++|+.|=+.+ .-+++++.+ ..+.+|++++.+. +. .....++|++.|..+ .+.+|.++......+
T Consensus 21 ~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~-~~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 91 (273)
T 1ae1_A 21 GTTALVTGGSKG-IGYAIVEELAGLGARVYTCSRNE-KE-------LDECLEIWREKGLNVEGSVCDLLSRTERDKLMQT 91 (273)
T ss_dssp TCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCH-HH-------HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEECCcch-HHHHHHHHHHHCCCEEEEEeCCH-HH-------HHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHH
Confidence 578999986543 233333332 1256888887763 22 223355666666543 566788876543221
Q ss_pred ---cC-CcccEEEEcC
Q 044601 90 ---RT-HKFDRVIYNF 101 (213)
Q Consensus 90 ---~~-~~FDrIiFNF 101 (213)
.. ...|.+|.|=
T Consensus 92 ~~~~~~g~id~lv~nA 107 (273)
T 1ae1_A 92 VAHVFDGKLNILVNNA 107 (273)
T ss_dssp HHHHTTSCCCEEEECC
T ss_pred HHHHcCCCCcEEEECC
Confidence 11 5789988874
No 425
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=25.88 E-value=2.8e+02 Score=23.29 Aligned_cols=72 Identities=25% Similarity=0.358 Sum_probs=45.5
Q ss_pred CCeEEEEecCChhHH-HH-HHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCC
Q 044601 15 KQRILLVGEGDFSFS-LC-LAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTH 92 (213)
Q Consensus 15 ~~~ILlVGEGnFSFS-~a-La~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~ 92 (213)
.++|++||=|.=.-| +| ++.+. +..|+.+ |..+ ++. ..+.|++.|+.|..|-|+..+.. .
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~--G~~V~~~--D~~~-----~~~---~~~~L~~~gi~v~~g~~~~~l~~------~ 65 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEA--GFEVSGC--DAKM-----YPP---MSTQLEALGIDVYEGFDAAQLDE------F 65 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHT--TCEEEEE--ESSC-----CTT---HHHHHHHTTCEEEESCCGGGGGS------C
T ss_pred CcEEEEEEECHHHHHHHHHHHHhC--CCEEEEE--cCCC-----CcH---HHHHHHhCCCEEECCCCHHHcCC------C
Confidence 478999999987775 44 34444 4566654 4321 122 35678899999998877655421 2
Q ss_pred cccEEEEcCCcCC
Q 044601 93 KFDRVIYNFPHVG 105 (213)
Q Consensus 93 ~FDrIiFNFPH~G 105 (213)
.+|.||.. |.+.
T Consensus 66 ~~d~vV~S-pgi~ 77 (326)
T 3eag_A 66 KADVYVIG-NVAK 77 (326)
T ss_dssp CCSEEEEC-TTCC
T ss_pred CCCEEEEC-CCcC
Confidence 36888763 4443
No 426
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=25.82 E-value=1e+02 Score=25.12 Aligned_cols=78 Identities=14% Similarity=0.110 Sum_probs=45.9
Q ss_pred CCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEE-EEeeeccccCCCccc---
Q 044601 15 KQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLV-FYGVDAMQMSQHFFL--- 89 (213)
Q Consensus 15 ~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V-~~gVDAt~L~~~~~l--- 89 (213)
++++|+.|=+.. .-+++++.+ ..+.+|++++.+.+ . .....++|++.|..+ .+.+|.++......+
T Consensus 4 ~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~-~-------~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~ 74 (264)
T 3tfo_A 4 DKVILITGASGG-IGEGIARELGVAGAKILLGARRQA-R-------IEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQA 74 (264)
T ss_dssp TCEEEESSTTSH-HHHHHHHHHHHTTCEEEEEESSHH-H-------HHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEeCCccH-HHHHHHHHHHHCCCEEEEEECCHH-H-------HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Confidence 567888886542 223333333 12578888877632 1 234466777777655 456788876643221
Q ss_pred ---cCCcccEEEEcC
Q 044601 90 ---RTHKFDRVIYNF 101 (213)
Q Consensus 90 ---~~~~FDrIiFNF 101 (213)
...+.|.+|.|=
T Consensus 75 ~~~~~g~iD~lVnnA 89 (264)
T 3tfo_A 75 AVDTWGRIDVLVNNA 89 (264)
T ss_dssp HHHHHSCCCEEEECC
T ss_pred HHHHcCCCCEEEECC
Confidence 124689888773
No 427
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=25.73 E-value=80 Score=26.27 Aligned_cols=78 Identities=18% Similarity=0.123 Sum_probs=46.4
Q ss_pred CCCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCC--CEEEEeeeccccCCCccc-
Q 044601 14 SKQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEERG--CLVFYGVDAMQMSQHFFL- 89 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g--~~V~~gVDAt~L~~~~~l- 89 (213)
++++||+.|=+.+ .-.++++.+ ..+.+|+.+..+.. ......++|++.| -...+.+|.++......+
T Consensus 40 ~~k~vlVTGas~G-IG~aia~~la~~G~~V~~~~r~~~--------~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~ 110 (293)
T 3rih_A 40 SARSVLVTGGTKG-IGRGIATVFARAGANVAVAARSPR--------ELSSVTAELGELGAGNVIGVRLDVSDPGSCADAA 110 (293)
T ss_dssp TTCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESSGG--------GGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEECCHH--------HHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHH
Confidence 4578888886643 233333333 12568888877642 2234566777765 344678899886543221
Q ss_pred -----cCCcccEEEEc
Q 044601 90 -----RTHKFDRVIYN 100 (213)
Q Consensus 90 -----~~~~FDrIiFN 100 (213)
...+.|.+|.|
T Consensus 111 ~~~~~~~g~iD~lvnn 126 (293)
T 3rih_A 111 RTVVDAFGALDVVCAN 126 (293)
T ss_dssp HHHHHHHSCCCEEEEC
T ss_pred HHHHHHcCCCCEEEEC
Confidence 12468988877
No 428
>3tbf_A Glucosamine--fructose-6-phosphate aminotransferas [isomerizing]; structural genomics; 2.28A {Francisella tularensis subsp}
Probab=25.66 E-value=1.5e+02 Score=25.82 Aligned_cols=68 Identities=21% Similarity=0.423 Sum_probs=43.0
Q ss_pred cccccCCCCCCeEEEEecCChhHHHHHHHH--------------------hC------CCCeEEEeccCCHHHHHhhcch
Q 044601 6 EKWSNHYSSKQRILLVGEGDFSFSLCLARE--------------------FG------FAHNMVATCLDTQETIANKYSN 59 (213)
Q Consensus 6 ~k~~~~y~~~~~ILlVGEGnFSFS~aLa~~--------------------~~------~~~~l~ATs~ds~~~l~~kY~~ 59 (213)
+++...|.+.++++++|-|- .|..|+--+ || ....|++-. +.+.+ |..
T Consensus 218 ~~~a~~~~~~~~~~~lGrG~-~~~~A~E~ALKlkE~s~i~ae~~~a~E~~HGP~alid~~~pvi~~~--~~d~~---~~k 291 (372)
T 3tbf_A 218 DQISEYFSDKEHTIFLGRGL-YYPIAIEGALKLKEISYIHAEAYPSGELKHGPLALVDKNMPIVAVV--PNDEL---LDK 291 (372)
T ss_dssp HHHHGGGTTCCEEEEEECTT-HHHHHHHHHHHHHHHHCCEEEEEEGGGTTTTTTTTCCTTCEEEEEE--CSSTT---HHH
T ss_pred HHHHHHHhccCCEEEEecCc-CHHHHHHHHHHHHHHhCcCcceeeHHHhcCccHhhcCCCCeEEEEe--cCCch---HHH
Confidence 35677888999999999995 577766322 22 123333322 22222 334
Q ss_pred HHHHHHHHHhCCCEEEEeee
Q 044601 60 AVDNVRELEERGCLVFYGVD 79 (213)
Q Consensus 60 a~~ni~~L~~~g~~V~~gVD 79 (213)
..+|+++++++|+.|+-=.|
T Consensus 292 ~~~~~~e~~~rg~~vi~i~~ 311 (372)
T 3tbf_A 292 TLSNLQEVHARGGKLILFVD 311 (372)
T ss_dssp HHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHcCCeEEEEEC
Confidence 67899999999998764333
No 429
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=25.63 E-value=63 Score=26.12 Aligned_cols=79 Identities=14% Similarity=0.136 Sum_probs=45.2
Q ss_pred CCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCE-EEEeeeccccCCCccc---
Q 044601 15 KQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCL-VFYGVDAMQMSQHFFL--- 89 (213)
Q Consensus 15 ~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~-V~~gVDAt~L~~~~~l--- 89 (213)
++++|+.|=+.+ .-+++++++ ..+.+|+++...+.+.+. ..++.++..|.. ..+.+|.++......+
T Consensus 25 ~k~vlITGas~g-IG~~~a~~l~~~G~~v~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~ 96 (269)
T 3gk3_A 25 KRVAFVTGGMGG-LGAAISRRLHDAGMAVAVSHSERNDHVS-------TWLMHERDAGRDFKAYAVDVADFESCERCAEK 96 (269)
T ss_dssp CCEEEETTTTSH-HHHHHHHHHHTTTCEEEEEECSCHHHHH-------HHHHHHHTTTCCCEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEECCCch-HHHHHHHHHHHCCCEEEEEcCCchHHHH-------HHHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence 567888885532 233444433 235788888766554332 234555555543 3567898887643221
Q ss_pred ---cCCcccEEEEcC
Q 044601 90 ---RTHKFDRVIYNF 101 (213)
Q Consensus 90 ---~~~~FDrIiFNF 101 (213)
...+.|.||.|=
T Consensus 97 ~~~~~g~id~li~nA 111 (269)
T 3gk3_A 97 VLADFGKVDVLINNA 111 (269)
T ss_dssp HHHHHSCCSEEEECC
T ss_pred HHHHcCCCCEEEECC
Confidence 124689888774
No 430
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=25.28 E-value=93 Score=25.07 Aligned_cols=78 Identities=18% Similarity=0.124 Sum_probs=45.9
Q ss_pred CCCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCC--CEEEEeeeccccCCCccc-
Q 044601 14 SKQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEERG--CLVFYGVDAMQMSQHFFL- 89 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g--~~V~~gVDAt~L~~~~~l- 89 (213)
+++++|+.|=+.+ .-.++++.+ ..+.+|+.+..+.+ . .....++|++.| -...+.+|.++......+
T Consensus 9 ~~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~-~-------~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~ 79 (262)
T 3pk0_A 9 QGRSVVVTGGTKG-IGRGIATVFARAGANVAVAGRSTA-D-------IDACVADLDQLGSGKVIGVQTDVSDRAQCDALA 79 (262)
T ss_dssp TTCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESCHH-H-------HHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHH
T ss_pred CCCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCHH-H-------HHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHH
Confidence 3578888885532 233344333 12568888877632 1 234466777665 345678898886643221
Q ss_pred -----cCCcccEEEEc
Q 044601 90 -----RTHKFDRVIYN 100 (213)
Q Consensus 90 -----~~~~FDrIiFN 100 (213)
+..+.|.+|.|
T Consensus 80 ~~~~~~~g~id~lvnn 95 (262)
T 3pk0_A 80 GRAVEEFGGIDVVCAN 95 (262)
T ss_dssp HHHHHHHSCCSEEEEC
T ss_pred HHHHHHhCCCCEEEEC
Confidence 12468988877
No 431
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=25.23 E-value=95 Score=24.32 Aligned_cols=80 Identities=19% Similarity=0.212 Sum_probs=44.3
Q ss_pred CCCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEE-EEeeeccccCCCccc-c
Q 044601 14 SKQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLV-FYGVDAMQMSQHFFL-R 90 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V-~~gVDAt~L~~~~~l-~ 90 (213)
++++||+.|=+.+ .-.+|++.+ ..+.+|++++.+..+ ......++|+..|..+ .+..|.++......+ .
T Consensus 6 ~~k~vlVTGasgg-iG~~~a~~l~~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 77 (258)
T 3afn_B 6 KGKRVLITGSSQG-IGLATARLFARAGAKVGLHGRKAPA-------NIDETIASMRADGGDAAFFAADLATSEACQQLVD 77 (258)
T ss_dssp TTCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESSCCT-------THHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHH
T ss_pred CCCEEEEeCCCCh-HHHHHHHHHHHCCCEEEEECCCchh-------hHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHH
Confidence 3578899886544 123333332 125688888776222 1223345566656544 567788876533211 1
Q ss_pred -----CCcccEEEEcC
Q 044601 91 -----THKFDRVIYNF 101 (213)
Q Consensus 91 -----~~~FDrIiFNF 101 (213)
....|.||.|=
T Consensus 78 ~~~~~~g~id~vi~~A 93 (258)
T 3afn_B 78 EFVAKFGGIDVLINNA 93 (258)
T ss_dssp HHHHHHSSCSEEEECC
T ss_pred HHHHHcCCCCEEEECC
Confidence 13689888774
No 432
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=25.23 E-value=97 Score=24.76 Aligned_cols=78 Identities=17% Similarity=0.076 Sum_probs=44.2
Q ss_pred CCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEE-EEeeeccccCCCccc---
Q 044601 15 KQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLV-FYGVDAMQMSQHFFL--- 89 (213)
Q Consensus 15 ~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V-~~gVDAt~L~~~~~l--- 89 (213)
++++|+.|=+.+ .-+++++.+ ..+.+|+++..+. +.+ ....++|++.|..+ .+.+|.++......+
T Consensus 5 ~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~-~~~-------~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 75 (260)
T 2qq5_A 5 GQVCVVTGASRG-IGRGIALQLCKAGATVYITGRHL-DTL-------RVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQ 75 (260)
T ss_dssp TCEEEESSTTSH-HHHHHHHHHHHTTCEEEEEESCH-HHH-------HHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHH
T ss_pred CCEEEEeCCCch-HHHHHHHHHHHCCCEEEEEeCCH-HHH-------HHHHHHHHHcCCceEEEECCCCCHHHHHHHHHH
Confidence 567888885542 334444433 1256888887763 222 23345555556544 567888876543211
Q ss_pred ---c-CCcccEEEEcC
Q 044601 90 ---R-THKFDRVIYNF 101 (213)
Q Consensus 90 ---~-~~~FDrIiFNF 101 (213)
. ..+.|.+|.|=
T Consensus 76 ~~~~~~g~id~lvnnA 91 (260)
T 2qq5_A 76 VDREQQGRLDVLVNNA 91 (260)
T ss_dssp HHHHHTTCCCEEEECC
T ss_pred HHHhcCCCceEEEECC
Confidence 0 35689888885
No 433
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=25.11 E-value=2.7e+02 Score=22.36 Aligned_cols=97 Identities=15% Similarity=0.038 Sum_probs=55.1
Q ss_pred CCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCC----EE-EEeeecccc----
Q 044601 13 SSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGC----LV-FYGVDAMQM---- 83 (213)
Q Consensus 13 ~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~----~V-~~gVDAt~L---- 83 (213)
.+.++||=+|=| +|..++-... +..||+.-.| ++..+ .+.+|++ +.|. +| ++-.||...
T Consensus 29 ~~a~~VLEiGtG---ySTl~lA~~~-~g~VvtvE~d--~~~~~---~ar~~l~---~~g~~~~~~I~~~~gda~~~~~wg 96 (202)
T 3cvo_A 29 EEAEVILEYGSG---GSTVVAAELP-GKHVTSVESD--RAWAR---MMKAWLA---ANPPAEGTEVNIVWTDIGPTGDWG 96 (202)
T ss_dssp HHCSEEEEESCS---HHHHHHHTST-TCEEEEEESC--HHHHH---HHHHHHH---HSCCCTTCEEEEEECCCSSBCGGG
T ss_pred hCCCEEEEECch---HHHHHHHHcC-CCEEEEEeCC--HHHHH---HHHHHHH---HcCCCCCCceEEEEeCchhhhccc
Confidence 357899999998 4555533332 4577666555 33333 2455544 4453 33 555676543
Q ss_pred -----------CCCc----cc-cCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeE
Q 044601 84 -----------SQHF----FL-RTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEI 141 (213)
Q Consensus 84 -----------~~~~----~l-~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~i 141 (213)
.+.. .+ ....||.|+-+ |.+ .+ .++..+..+|+ ++|.|
T Consensus 97 ~p~~~~~~~~l~~~~~~i~~~~~~~~fDlIfID----g~k----------~~-----~~~~~~l~~l~-~GG~I 150 (202)
T 3cvo_A 97 HPVSDAKWRSYPDYPLAVWRTEGFRHPDVVLVD----GRF----------RV-----GCALATAFSIT-RPVTL 150 (202)
T ss_dssp CBSSSTTGGGTTHHHHGGGGCTTCCCCSEEEEC----SSS----------HH-----HHHHHHHHHCS-SCEEE
T ss_pred ccccchhhhhHHHHhhhhhccccCCCCCEEEEe----CCC----------ch-----hHHHHHHHhcC-CCeEE
Confidence 1100 11 13679999887 322 11 45555778897 88888
No 434
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=25.02 E-value=57 Score=26.58 Aligned_cols=86 Identities=12% Similarity=0.022 Sum_probs=47.7
Q ss_pred CCCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEE-EEeeeccccCCCccc--
Q 044601 14 SKQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLV-FYGVDAMQMSQHFFL-- 89 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V-~~gVDAt~L~~~~~l-- 89 (213)
+++++|+.|=+.. .-+++++++ ..+.+|+.++.+... +.+--....+..+.++..|.++ .+.+|.++......+
T Consensus 5 ~~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 82 (274)
T 3e03_A 5 SGKTLFITGASRG-IGLAIALRAARDGANVAIAAKSAVA-NPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVA 82 (274)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCCSC-CTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHH
T ss_pred CCcEEEEECCCCh-HHHHHHHHHHHCCCEEEEEeccchh-hhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHH
Confidence 3578899986642 233343333 125688888877431 0000012334455666666655 577898886643221
Q ss_pred ----cCCcccEEEEcC
Q 044601 90 ----RTHKFDRVIYNF 101 (213)
Q Consensus 90 ----~~~~FDrIiFNF 101 (213)
+..+.|.+|.|=
T Consensus 83 ~~~~~~g~iD~lvnnA 98 (274)
T 3e03_A 83 ATVDTFGGIDILVNNA 98 (274)
T ss_dssp HHHHHHSCCCEEEECC
T ss_pred HHHHHcCCCCEEEECC
Confidence 124689888874
No 435
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=25.00 E-value=51 Score=30.12 Aligned_cols=83 Identities=11% Similarity=0.142 Sum_probs=45.4
Q ss_pred CCCeEEEEecCChhHHHHH-HHHhCCCCeEEEeccCCHHHHHhhcch--HHHHHHHHHhCCCEEEEeeeccccCCCc---
Q 044601 14 SKQRILLVGEGDFSFSLCL-AREFGFAHNMVATCLDTQETIANKYSN--AVDNVRELEERGCLVFYGVDAMQMSQHF--- 87 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aL-a~~~~~~~~l~ATs~ds~~~l~~kY~~--a~~ni~~L~~~g~~V~~gVDAt~L~~~~--- 87 (213)
..++|++||-|.-..-.|. +..++ ..++-- +..+.+...++. +..-.+.|++.|++++.+..++.+....
T Consensus 186 ~~~~vvViGgG~~g~e~A~~l~~~g--~~Vtlv--~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v 261 (588)
T 3ics_A 186 KPRHATVIGGGFIGVEMVENLRERG--IEVTLV--EMANQVMPPIDYEMAAYVHEHMKNHDVELVFEDGVDALEENGAVV 261 (588)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTT--CEEEEE--CSSSSSCTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEGGGTEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCC--CeEEEE--ecCCcccccCCHHHHHHHHHHHHHcCCEEEECCeEEEEecCCCEE
Confidence 3689999998876544443 22334 333322 211122222211 2234577889999999887776665321
Q ss_pred ccc---CCcccEEEEc
Q 044601 88 FLR---THKFDRVIYN 100 (213)
Q Consensus 88 ~l~---~~~FDrIiFN 100 (213)
.+. ...+|.||+-
T Consensus 262 ~~~~g~~i~~D~Vi~a 277 (588)
T 3ics_A 262 RLKSGSVIQTDMLILA 277 (588)
T ss_dssp EETTSCEEECSEEEEC
T ss_pred EECCCCEEEcCEEEEc
Confidence 111 1357888874
No 436
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=25.00 E-value=81 Score=26.80 Aligned_cols=99 Identities=16% Similarity=0.198 Sum_probs=56.1
Q ss_pred cCCCCCCeEEEE-ecCChhHHHH-HHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCC-
Q 044601 10 NHYSSKQRILLV-GEGDFSFSLC-LAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQH- 86 (213)
Q Consensus 10 ~~y~~~~~ILlV-GEGnFSFS~a-La~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~- 86 (213)
..-.++++||+. |-|..--+.+ +|+..| .+|++|+.+.+ .++.++++|+....+.+...+.+.
T Consensus 163 ~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~G--a~Vi~~~~~~~------------~~~~~~~lGa~~~~~~~~~~~~~~~ 228 (353)
T 4dup_A 163 AGLTEGESVLIHGGTSGIGTTAIQLARAFG--AEVYATAGSTG------------KCEACERLGAKRGINYRSEDFAAVI 228 (353)
T ss_dssp TCCCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESSHH------------HHHHHHHHTCSEEEETTTSCHHHHH
T ss_pred cCCCCCCEEEEEcCCCHHHHHHHHHHHHcC--CEEEEEeCCHH------------HHHHHHhcCCCEEEeCCchHHHHHH
Confidence 345678999999 6787765544 466654 58999986532 244556678765543332222111
Q ss_pred ccccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEE
Q 044601 87 FFLRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVT 144 (213)
Q Consensus 87 ~~l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvT 144 (213)
..+....+|.||=+ +|.. .+..+..+|+ ++|.|.+.
T Consensus 229 ~~~~~~g~Dvvid~---~g~~------------------~~~~~~~~l~-~~G~iv~~ 264 (353)
T 4dup_A 229 KAETGQGVDIILDM---IGAA------------------YFERNIASLA-KDGCLSII 264 (353)
T ss_dssp HHHHSSCEEEEEES---CCGG------------------GHHHHHHTEE-EEEEEEEC
T ss_pred HHHhCCCceEEEEC---CCHH------------------HHHHHHHHhc-cCCEEEEE
Confidence 01114568877643 3321 2445667787 78876543
No 437
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=24.94 E-value=1.8e+02 Score=22.99 Aligned_cols=78 Identities=14% Similarity=0.261 Sum_probs=43.1
Q ss_pred CCCeEEEEecCChhHHHHHHHHh-CCC---CeEEEeccCCHHHHHhhcchHHHHHHHHHhCC-CEEEEeeeccccCCCcc
Q 044601 14 SKQRILLVGEGDFSFSLCLAREF-GFA---HNMVATCLDTQETIANKYSNAVDNVRELEERG-CLVFYGVDAMQMSQHFF 88 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~-~~~---~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g-~~V~~gVDAt~L~~~~~ 88 (213)
+.++||+.|=+.+ --.+|++++ ..+ .+|++++.+... + +.+++|.+.+ -...+.+|.++......
T Consensus 20 ~~k~vlITGasgg-IG~~la~~L~~~G~~~~~V~~~~r~~~~-~--------~~~~~l~~~~~~~~~~~~Dl~~~~~v~~ 89 (267)
T 1sny_A 20 HMNSILITGCNRG-LGLGLVKALLNLPQPPQHLFTTCRNREQ-A--------KELEDLAKNHSNIHILEIDLRNFDAYDK 89 (267)
T ss_dssp CCSEEEESCCSSH-HHHHHHHHHHTSSSCCSEEEEEESCTTS-C--------HHHHHHHHHCTTEEEEECCTTCGGGHHH
T ss_pred CCCEEEEECCCCc-HHHHHHHHHHhcCCCCcEEEEEecChhh-h--------HHHHHhhccCCceEEEEecCCChHHHHH
Confidence 3578899886542 334455444 223 788888876431 0 1133343323 34466789888764322
Q ss_pred ccC------C--cccEEEEcC
Q 044601 89 LRT------H--KFDRVIYNF 101 (213)
Q Consensus 89 l~~------~--~FDrIiFNF 101 (213)
+-. . ..|.||.|=
T Consensus 90 ~~~~~~~~~g~~~id~li~~A 110 (267)
T 1sny_A 90 LVADIEGVTKDQGLNVLFNNA 110 (267)
T ss_dssp HHHHHHHHHGGGCCSEEEECC
T ss_pred HHHHHHHhcCCCCccEEEECC
Confidence 110 1 689888774
No 438
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=24.62 E-value=90 Score=25.02 Aligned_cols=77 Identities=10% Similarity=0.077 Sum_probs=44.5
Q ss_pred CCCeEEEEecCC---hhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhC----CCEEEEeeeccccCCC
Q 044601 14 SKQRILLVGEGD---FSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEER----GCLVFYGVDAMQMSQH 86 (213)
Q Consensus 14 ~~~~ILlVGEGn---FSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~----g~~V~~gVDAt~L~~~ 86 (213)
+++++|+.|=+. ...+..|+++ +.+|+.++.+. +.+ ....++|++. +-...+.+|.++....
T Consensus 6 ~~k~~lVTGas~GIG~aia~~l~~~---G~~V~~~~r~~-~~~-------~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v 74 (250)
T 3nyw_A 6 QKGLAIITGASQGIGAVIAAGLATD---GYRVVLIARSK-QNL-------EKVHDEIMRSNKHVQEPIVLPLDITDCTKA 74 (250)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHH---TCEEEEEESCH-HHH-------HHHHHHHHHHCTTSCCCEEEECCTTCHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC---CCEEEEEECCH-HHH-------HHHHHHHHHhccccCcceEEeccCCCHHHH
Confidence 357889998764 3455555554 46888887663 222 2223444432 3345677899886643
Q ss_pred ccc------cCCcccEEEEcC
Q 044601 87 FFL------RTHKFDRVIYNF 101 (213)
Q Consensus 87 ~~l------~~~~FDrIiFNF 101 (213)
..+ +..+.|.+|.|=
T Consensus 75 ~~~~~~~~~~~g~iD~lvnnA 95 (250)
T 3nyw_A 75 DTEIKDIHQKYGAVDILVNAA 95 (250)
T ss_dssp HHHHHHHHHHHCCEEEEEECC
T ss_pred HHHHHHHHHhcCCCCEEEECC
Confidence 221 124689888764
No 439
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=24.56 E-value=1.8e+02 Score=23.48 Aligned_cols=79 Identities=10% Similarity=0.072 Sum_probs=43.0
Q ss_pred CCCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhC-CC-EEEEeeeccccCCCccc-
Q 044601 14 SKQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEER-GC-LVFYGVDAMQMSQHFFL- 89 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~-g~-~V~~gVDAt~L~~~~~l- 89 (213)
++++||+.|=+.+ .-.+|++.+ ..+.+|++++.+.. .+ ....++|++. |. ...+.+|.++......+
T Consensus 25 ~~k~vlITGasgg-iG~~la~~L~~~G~~V~~~~r~~~-~~-------~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~ 95 (302)
T 1w6u_A 25 QGKVAFITGGGTG-LGKGMTTLLSSLGAQCVIASRKMD-VL-------KATAEQISSQTGNKVHAIQCDVRDPDMVQNTV 95 (302)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHH-HH-------HHHHHHHHHHHSSCEEEEECCTTCHHHHHHHH
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCCEEEEEeCCHH-HH-------HHHHHHHHHhcCCceEEEEeCCCCHHHHHHHH
Confidence 3578999996653 233333332 12568888877632 21 2233445443 43 34567888875532211
Q ss_pred -----cCCcccEEEEcC
Q 044601 90 -----RTHKFDRVIYNF 101 (213)
Q Consensus 90 -----~~~~FDrIiFNF 101 (213)
...+.|.||.|=
T Consensus 96 ~~~~~~~g~id~li~~A 112 (302)
T 1w6u_A 96 SELIKVAGHPNIVINNA 112 (302)
T ss_dssp HHHHHHTCSCSEEEECC
T ss_pred HHHHHHcCCCCEEEECC
Confidence 124679888763
No 440
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=24.56 E-value=93 Score=25.00 Aligned_cols=80 Identities=14% Similarity=0.138 Sum_probs=44.9
Q ss_pred CCCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCC-EEEEeeeccccCCCccc--
Q 044601 14 SKQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEERGC-LVFYGVDAMQMSQHFFL-- 89 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~-~V~~gVDAt~L~~~~~l-- 89 (213)
..++||+.|=+.+ .-.++++.+ ..+.+|+.....+.+. ....+++|++.+. ...+.+|.++......+
T Consensus 25 ~~k~vlVTGas~g-IG~~la~~l~~~G~~v~i~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~ 96 (267)
T 4iiu_A 25 MSRSVLVTGASKG-IGRAIARQLAADGFNIGVHYHRDAAG-------AQETLNAIVANGGNGRLLSFDVANREQCREVLE 96 (267)
T ss_dssp CCCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESSCHHH-------HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEeCCchHH-------HHHHHHHHHhcCCceEEEEecCCCHHHHHHHHH
Confidence 3578899885543 334444433 1256775554444432 2334666766654 34667888886643221
Q ss_pred ----cCCcccEEEEcC
Q 044601 90 ----RTHKFDRVIYNF 101 (213)
Q Consensus 90 ----~~~~FDrIiFNF 101 (213)
.....|.||.|=
T Consensus 97 ~~~~~~g~id~li~nA 112 (267)
T 4iiu_A 97 HEIAQHGAWYGVVSNA 112 (267)
T ss_dssp HHHHHHCCCSEEEECC
T ss_pred HHHHHhCCccEEEECC
Confidence 124789888773
No 441
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=24.34 E-value=95 Score=24.75 Aligned_cols=79 Identities=13% Similarity=0.144 Sum_probs=43.5
Q ss_pred CCCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCcccc--
Q 044601 14 SKQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLR-- 90 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~-- 90 (213)
++++||+.|=+.+ .-.++++++ ..+.+|+++..+.. . .....++|...+-...+..|.++......+-
T Consensus 15 ~~k~vlITGasgg-iG~~~a~~l~~~G~~V~~~~r~~~-~-------~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 85 (278)
T 2bgk_A 15 QDKVAIITGGAGG-IGETTAKLFVRYGAKVVIADIADD-H-------GQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDT 85 (278)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESCHH-H-------HHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHH
T ss_pred cCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEcCChh-H-------HHHHHHHhCCCCceEEEECCCCCHHHHHHHHHH
Confidence 4678999986643 233333333 12568888876532 1 1222344443334456678888765432211
Q ss_pred ----CCcccEEEEcC
Q 044601 91 ----THKFDRVIYNF 101 (213)
Q Consensus 91 ----~~~FDrIiFNF 101 (213)
....|.||.|-
T Consensus 86 ~~~~~~~id~li~~A 100 (278)
T 2bgk_A 86 TIAKHGKLDIMFGNV 100 (278)
T ss_dssp HHHHHSCCCEEEECC
T ss_pred HHHHcCCCCEEEECC
Confidence 13689998775
No 442
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=24.28 E-value=1.6e+02 Score=28.03 Aligned_cols=65 Identities=15% Similarity=0.155 Sum_probs=36.6
Q ss_pred CCCeEEEEe--cCChh--HHHHHHHHhCCCCeEEEeccCCHHHHHh--hcc-hHHHHHHHHHhCCCEEEEeeeccccC
Q 044601 14 SKQRILLVG--EGDFS--FSLCLAREFGFAHNMVATCLDTQETIAN--KYS-NAVDNVRELEERGCLVFYGVDAMQMS 84 (213)
Q Consensus 14 ~~~~ILlVG--EGnFS--FS~aLa~~~~~~~~l~ATs~ds~~~l~~--kY~-~a~~ni~~L~~~g~~V~~gVDAt~L~ 84 (213)
..++|++|| -|+-. .+..|++ ++ ..|+--...+ +.. ..+ ....-.+.|++.|++++.+..++.+.
T Consensus 527 ~gk~VvVIG~GgG~~g~e~A~~l~~-~G--~~Vtlv~~~~---l~~~~~~~~~~~~~~~~l~~~GV~i~~~~~v~~i~ 598 (729)
T 1o94_A 527 IGKRVVILNADTYFMAPSLAEKLAT-AG--HEVTIVSGVH---LANYMHFTLEYPNMMRRLHELHVEELGDHFCSRIE 598 (729)
T ss_dssp CCSEEEEEECCCSSHHHHHHHHHHH-TT--CEEEEEESSC---TTHHHHHTTCHHHHHHHHHHTTCEEECSEEEEEEE
T ss_pred CCCeEEEEcCCCCchHHHHHHHHHH-cC--CEEEEEeccc---ccccccccccHHHHHHHHHhCCCEEEcCcEEEEEE
Confidence 468999999 44443 3444443 34 3444333322 111 111 23445678899999999887666554
No 443
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=24.24 E-value=95 Score=26.69 Aligned_cols=36 Identities=22% Similarity=0.384 Sum_probs=25.2
Q ss_pred CCCCCCeEEEEecCChh-HHHHHHHHhCCCCeEEEeccC
Q 044601 11 HYSSKQRILLVGEGDFS-FSLCLAREFGFAHNMVATCLD 48 (213)
Q Consensus 11 ~y~~~~~ILlVGEGnFS-FS~aLa~~~~~~~~l~ATs~d 48 (213)
...++++||++|-|..- ++..||+..| ..|+||+..
T Consensus 191 ~~~~g~~VlV~GaG~vG~~aiqlak~~G--a~Vi~~~~~ 227 (369)
T 1uuf_A 191 QAGPGKKVGVVGIGGLGHMGIKLAHAMG--AHVVAFTTS 227 (369)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEeCC
Confidence 45678999999987543 4445577765 468888754
No 444
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=24.15 E-value=82 Score=26.08 Aligned_cols=76 Identities=13% Similarity=0.077 Sum_probs=43.6
Q ss_pred CCeEEEEecCCh---hHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCE-EEEeeeccccCCCccc-
Q 044601 15 KQRILLVGEGDF---SFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCL-VFYGVDAMQMSQHFFL- 89 (213)
Q Consensus 15 ~~~ILlVGEGnF---SFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~-V~~gVDAt~L~~~~~l- 89 (213)
+++||+.|=+.+ ..+..|++ .+.+|+++..+. +. .....++|++.|.. ..+.+|.++......+
T Consensus 34 ~k~vlVTGas~gIG~aia~~L~~---~G~~V~~~~r~~-~~-------~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~ 102 (291)
T 3cxt_A 34 GKIALVTGASYGIGFAIASAYAK---AGATIVFNDINQ-EL-------VDRGMAAYKAAGINAHGYVCDVTDEDGIQAMV 102 (291)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHH---TTCEEEEEESSH-HH-------HHHHHHHHHHTTCCCEEEECCTTCHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHH---CCCEEEEEeCCH-HH-------HHHHHHHHHhcCCeEEEEEecCCCHHHHHHHH
Confidence 578999986543 33334443 256888887753 22 22334566665543 3566788876533221
Q ss_pred -----cCCcccEEEEcC
Q 044601 90 -----RTHKFDRVIYNF 101 (213)
Q Consensus 90 -----~~~~FDrIiFNF 101 (213)
.....|.||.|=
T Consensus 103 ~~~~~~~g~iD~lvnnA 119 (291)
T 3cxt_A 103 AQIESEVGIIDILVNNA 119 (291)
T ss_dssp HHHHHHTCCCCEEEECC
T ss_pred HHHHHHcCCCcEEEECC
Confidence 124689888773
No 445
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=24.03 E-value=1.2e+02 Score=24.19 Aligned_cols=76 Identities=17% Similarity=0.180 Sum_probs=42.9
Q ss_pred CCCeEEEEecCCh---hHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhC--CC-EEEEeeeccccCCCc
Q 044601 14 SKQRILLVGEGDF---SFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEER--GC-LVFYGVDAMQMSQHF 87 (213)
Q Consensus 14 ~~~~ILlVGEGnF---SFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~--g~-~V~~gVDAt~L~~~~ 87 (213)
++++||+.|=+.+ ..+..|+++ +.+|++++.+. +.+ ....++|++. |. ...+.+|.++.....
T Consensus 12 ~~k~vlVTGas~gIG~~ia~~l~~~---G~~V~~~~r~~-~~~-------~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~ 80 (267)
T 1iy8_A 12 TDRVVLITGGGSGLGRATAVRLAAE---GAKLSLVDVSS-EGL-------EASKAAVLETAPDAEVLTTVADVSDEAQVE 80 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESCH-HHH-------HHHHHHHHHHCTTCCEEEEECCTTSHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC---CCEEEEEeCCH-HHH-------HHHHHHHHhhcCCceEEEEEccCCCHHHHH
Confidence 3578999986543 334444433 57888887763 222 2223444443 43 345678888765432
Q ss_pred cc------cCCcccEEEEc
Q 044601 88 FL------RTHKFDRVIYN 100 (213)
Q Consensus 88 ~l------~~~~FDrIiFN 100 (213)
.+ +....|.+|.|
T Consensus 81 ~~~~~~~~~~g~id~lv~n 99 (267)
T 1iy8_A 81 AYVTATTERFGRIDGFFNN 99 (267)
T ss_dssp HHHHHHHHHHSCCSEEEEC
T ss_pred HHHHHHHHHcCCCCEEEEC
Confidence 21 12468988887
No 446
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=23.95 E-value=2.2e+02 Score=22.64 Aligned_cols=76 Identities=14% Similarity=0.205 Sum_probs=42.7
Q ss_pred CCCeEEEEecC---Ch--hHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHh-CCCEEEEeeeccccCCCc
Q 044601 14 SKQRILLVGEG---DF--SFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEE-RGCLVFYGVDAMQMSQHF 87 (213)
Q Consensus 14 ~~~~ILlVGEG---nF--SFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~-~g~~V~~gVDAt~L~~~~ 87 (213)
++++||+.|=+ .. ..+..|+++ +.+|++++.+.. + .+.+++|.+ .|....+.+|.++.....
T Consensus 7 ~~k~vlVTGas~~~gIG~~ia~~l~~~---G~~V~~~~r~~~--~-------~~~~~~l~~~~~~~~~~~~D~~~~~~v~ 74 (261)
T 2wyu_A 7 SGKKALVMGVTNQRSLGFAIAAKLKEA---GAEVALSYQAER--L-------RPEAEKLAEALGGALLFRADVTQDEELD 74 (261)
T ss_dssp TTCEEEEESCCSSSSHHHHHHHHHHHH---TCEEEEEESCGG--G-------HHHHHHHHHHTTCCEEEECCTTCHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHC---CCEEEEEcCCHH--H-------HHHHHHHHHhcCCcEEEECCCCCHHHHH
Confidence 35789999964 43 333344443 467888876642 1 123444433 243456778888765432
Q ss_pred cc-c-----CCcccEEEEcC
Q 044601 88 FL-R-----THKFDRVIYNF 101 (213)
Q Consensus 88 ~l-~-----~~~FDrIiFNF 101 (213)
.+ + ....|.||.|=
T Consensus 75 ~~~~~~~~~~g~iD~lv~~A 94 (261)
T 2wyu_A 75 ALFAGVKEAFGGLDYLVHAI 94 (261)
T ss_dssp HHHHHHHHHHSSEEEEEECC
T ss_pred HHHHHHHHHcCCCCEEEECC
Confidence 21 1 13688888774
No 447
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=23.83 E-value=1.1e+02 Score=24.31 Aligned_cols=78 Identities=14% Similarity=0.158 Sum_probs=43.5
Q ss_pred CCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEE-EEeeeccccCCCccc-c-
Q 044601 15 KQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLV-FYGVDAMQMSQHFFL-R- 90 (213)
Q Consensus 15 ~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V-~~gVDAt~L~~~~~l-~- 90 (213)
+++||+.|=+.+ .-+++++.+ ..+.+|+++...+.+.+ .+..++|++.|..+ .+.+|.++......+ +
T Consensus 4 ~k~vlVTGas~g-iG~~ia~~l~~~G~~V~~~~r~~~~~~-------~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 75 (246)
T 2uvd_A 4 GKVALVTGASRG-IGRAIAIDLAKQGANVVVNYAGNEQKA-------NEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQ 75 (246)
T ss_dssp TCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESSCHHHH-------HHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCCHHHH-------HHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Confidence 567888885543 233333332 12578888877444322 22345666666543 567788876543221 1
Q ss_pred ----CCcccEEEEc
Q 044601 91 ----THKFDRVIYN 100 (213)
Q Consensus 91 ----~~~FDrIiFN 100 (213)
....|.+|.|
T Consensus 76 ~~~~~g~id~lv~n 89 (246)
T 2uvd_A 76 TVDVFGQVDILVNN 89 (246)
T ss_dssp HHHHHSCCCEEEEC
T ss_pred HHHHcCCCCEEEEC
Confidence 1468988876
No 448
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=23.80 E-value=86 Score=29.04 Aligned_cols=32 Identities=28% Similarity=0.401 Sum_probs=21.1
Q ss_pred CCCCCeEEEEecCChhHHHHH-HHHhCCCCeEEEe
Q 044601 12 YSSKQRILLVGEGDFSFSLCL-AREFGFAHNMVAT 45 (213)
Q Consensus 12 y~~~~~ILlVGEGnFSFS~aL-a~~~~~~~~l~AT 45 (213)
|-.++|+.+.||+++.++++= +..+| ..++++
T Consensus 361 ~l~GKrvaI~gd~~~~~~la~fL~elG--m~vv~v 393 (523)
T 3u7q_B 361 WLHGKRFALWGDPDFVMGLVKFLLELG--CEPVHI 393 (523)
T ss_dssp HHTTCEEEEECSHHHHHHHHHHHHHTT--CEEEEE
T ss_pred hcCCCEEEEECCchHHHHHHHHHHHcC--CEEEEE
Confidence 445899999999988776553 33555 444443
No 449
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=23.68 E-value=74 Score=25.57 Aligned_cols=79 Identities=14% Similarity=0.129 Sum_probs=45.4
Q ss_pred CCCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEE-EEeeeccccCCCccc--
Q 044601 14 SKQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLV-FYGVDAMQMSQHFFL-- 89 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V-~~gVDAt~L~~~~~l-- 89 (213)
+++++|+.|=+.. .-+++++.+ ..+.+|++++.+.. . ..+..++|++.|..+ .+.+|.++......+
T Consensus 5 ~~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~-~-------~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 75 (257)
T 3imf_A 5 KEKVVIITGGSSG-MGKGMATRFAKEGARVVITGRTKE-K-------LEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIE 75 (257)
T ss_dssp TTCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESCHH-H-------HHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHH-H-------HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHH
Confidence 3578888886542 233333332 12568888876632 1 233456677666544 567888886543221
Q ss_pred ----cCCcccEEEEcC
Q 044601 90 ----RTHKFDRVIYNF 101 (213)
Q Consensus 90 ----~~~~FDrIiFNF 101 (213)
.....|.+|.|=
T Consensus 76 ~~~~~~g~id~lv~nA 91 (257)
T 3imf_A 76 QIDEKFGRIDILINNA 91 (257)
T ss_dssp HHHHHHSCCCEEEECC
T ss_pred HHHHHcCCCCEEEECC
Confidence 124689888773
No 450
>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*
Probab=23.61 E-value=1.5e+02 Score=26.72 Aligned_cols=84 Identities=19% Similarity=0.181 Sum_probs=51.7
Q ss_pred CCCCCCeEEEEecCCh---hHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEE-EEeeeccccCCC
Q 044601 11 HYSSKQRILLVGEGDF---SFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLV-FYGVDAMQMSQH 86 (213)
Q Consensus 11 ~y~~~~~ILlVGEGnF---SFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V-~~gVDAt~L~~~ 86 (213)
.+.++.+||+.|=..+ .++..|+++ | ..+|+.++....+ -+...+.+++|++.|+.| .+.+|.++....
T Consensus 222 ~~~~~~~vLITGgtGgIG~~la~~La~~-G-~~~vvl~~R~~~~-----~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v 294 (486)
T 2fr1_A 222 EWKPTGTVLVTGGTGGVGGQIARWLARR-G-APHLLLVSRSGPD-----ADGAGELVAELEALGARTTVAACDVTDRESV 294 (486)
T ss_dssp CCCCCSEEEEETTTSHHHHHHHHHHHHH-T-CSEEEEEESSGGG-----STTHHHHHHHHHHTTCEEEEEECCTTCHHHH
T ss_pred CcCCCCEEEEECCCCHHHHHHHHHHHHc-C-CCEEEEEcCCCCC-----cHHHHHHHHHHHhcCCEEEEEEeCCCCHHHH
Confidence 4677899999996543 344455544 3 3358888876421 123445567888888866 567888875532
Q ss_pred ccc-----cCCcccEEEEcC
Q 044601 87 FFL-----RTHKFDRVIYNF 101 (213)
Q Consensus 87 ~~l-----~~~~FDrIiFNF 101 (213)
..+ .....|.||.|=
T Consensus 295 ~~~~~~i~~~g~ld~VIh~A 314 (486)
T 2fr1_A 295 RELLGGIGDDVPLSAVFHAA 314 (486)
T ss_dssp HHHHHTSCTTSCEEEEEECC
T ss_pred HHHHHHHHhcCCCcEEEECC
Confidence 111 124678888664
No 451
>2o1s_A 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thiamine, isoprenoid, transferase; HET: TDP; 2.40A {Escherichia coli}
Probab=23.57 E-value=1.7e+02 Score=27.29 Aligned_cols=33 Identities=15% Similarity=0.389 Sum_probs=21.7
Q ss_pred CCCeEEEEecCChh---H--HHHHHHHhCCCCeEEEeccC
Q 044601 14 SKQRILLVGEGDFS---F--SLCLAREFGFAHNMVATCLD 48 (213)
Q Consensus 14 ~~~~ILlVGEGnFS---F--S~aLa~~~~~~~~l~ATs~d 48 (213)
+...|.++|||.|+ + ++..|.+++ .+|+.-..|
T Consensus 143 ~~~Vv~v~GDG~~~~G~~~EaL~~A~~~~--~pli~vvnn 180 (621)
T 2o1s_A 143 NRRTVCVIGDGAITAGMAFEAMNHAGDIR--PDMLVILND 180 (621)
T ss_dssp CCCEEEEEETTGGGSHHHHHHHHHHHHHC--CSEEEEEEE
T ss_pred CCeEEEEEchhhhhccHHHHHHHHHHhhC--CCEEEEEeC
Confidence 45678899999999 3 566677765 344443333
No 452
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=23.55 E-value=2.1e+02 Score=27.76 Aligned_cols=84 Identities=18% Similarity=0.184 Sum_probs=51.0
Q ss_pred CCCCCCeEEEEecCChhHHHHHHHHhC--C-CCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEE-EEeeeccccCCC
Q 044601 11 HYSSKQRILLVGEGDFSFSLCLAREFG--F-AHNMVATCLDTQETIANKYSNAVDNVRELEERGCLV-FYGVDAMQMSQH 86 (213)
Q Consensus 11 ~y~~~~~ILlVGEGnFSFS~aLa~~~~--~-~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V-~~gVDAt~L~~~ 86 (213)
.+.+++.+|++|=+ =-.-+++|+.+- . ..+|+.++.... +-+.+.+.+++|++.|++| .+.+|+++....
T Consensus 526 ~~~~~~~~lItGg~-~GlG~aiA~~la~~~Ga~~vvl~~R~~~-----~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v 599 (795)
T 3slk_A 526 VWDAAGTVLVTGGT-GALGAEVARHLVIERGVRNLVLVSRRGP-----AASGAAELVAQLTAYGAEVSLQACDVADRETL 599 (795)
T ss_dssp CCCTTSEEEEETTT-SHHHHHHHHHHHHTSSCCEEEEEESSGG-----GSTTHHHHHHHHHHTTCEEEEEECCTTCHHHH
T ss_pred ccccccceeeccCC-CCcHHHHHHHHHHHcCCcEEEEeccCcc-----chHHHHHHHHHHHhcCCcEEEEEeecCCHHHH
Confidence 36678899999843 233344444331 2 346888887632 1124566788999999877 567898876543
Q ss_pred ccc-----cCCcccEEEEc
Q 044601 87 FFL-----RTHKFDRVIYN 100 (213)
Q Consensus 87 ~~l-----~~~~FDrIiFN 100 (213)
..+ ...+.|.||-|
T Consensus 600 ~~~~~~~~~~~~id~lVnn 618 (795)
T 3slk_A 600 AKVLASIPDEHPLTAVVHA 618 (795)
T ss_dssp HHHHHTSCTTSCEEEEEEC
T ss_pred HHHHHHHHHhCCCEEEEEC
Confidence 211 11257777665
No 453
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=23.49 E-value=71 Score=26.31 Aligned_cols=79 Identities=16% Similarity=0.095 Sum_probs=45.8
Q ss_pred CCCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEE-EEeeeccccCCCccc--
Q 044601 14 SKQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLV-FYGVDAMQMSQHFFL-- 89 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V-~~gVDAt~L~~~~~l-- 89 (213)
+++++|+.|=+.+ .-+++++.+ ..+.+|+++..+.. . ..+..++|++.|..+ .+.+|.++......+
T Consensus 7 ~gk~vlVTGas~G-IG~aia~~la~~G~~V~~~~r~~~-~-------~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 77 (280)
T 3tox_A 7 EGKIAIVTGASSG-IGRAAALLFAREGAKVVVTARNGN-A-------LAELTDEIAGGGGEAAALAGDVGDEALHEALVE 77 (280)
T ss_dssp TTCEEEESSTTSH-HHHHHHHHHHHTTCEEEECCSCHH-H-------HHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHH
T ss_pred CCCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEECCHH-H-------HHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHH
Confidence 4578888886542 233333333 12578888877632 1 234456676666544 567788876543221
Q ss_pred ----cCCcccEEEEcC
Q 044601 90 ----RTHKFDRVIYNF 101 (213)
Q Consensus 90 ----~~~~FDrIiFNF 101 (213)
+..+.|.+|.|=
T Consensus 78 ~~~~~~g~iD~lvnnA 93 (280)
T 3tox_A 78 LAVRRFGGLDTAFNNA 93 (280)
T ss_dssp HHHHHHSCCCEEEECC
T ss_pred HHHHHcCCCCEEEECC
Confidence 124689888774
No 454
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=23.46 E-value=2.8e+02 Score=22.06 Aligned_cols=80 Identities=16% Similarity=0.162 Sum_probs=45.2
Q ss_pred CCCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEE-EEeeeccccCCCccc--
Q 044601 14 SKQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLV-FYGVDAMQMSQHFFL-- 89 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V-~~gVDAt~L~~~~~l-- 89 (213)
++++||+.|=+.+ .-+++++++ ..+.+|+.+.-.+.+. .....++|++.|..+ .+.+|.++......+
T Consensus 3 ~~k~vlVTGas~g-IG~aia~~l~~~G~~vv~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 74 (258)
T 3oid_A 3 QNKCALVTGSSRG-VGKAAAIRLAENGYNIVINYARSKKA-------ALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQ 74 (258)
T ss_dssp CCCEEEESSCSSH-HHHHHHHHHHHTTCEEEEEESSCHHH-------HHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEecCCch-HHHHHHHHHHHCCCEEEEEcCCCHHH-------HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH
Confidence 4678888886542 233444433 1356777763333332 233456677766544 567898886643221
Q ss_pred ----cCCcccEEEEcC
Q 044601 90 ----RTHKFDRVIYNF 101 (213)
Q Consensus 90 ----~~~~FDrIiFNF 101 (213)
...+.|.+|.|=
T Consensus 75 ~~~~~~g~id~lv~nA 90 (258)
T 3oid_A 75 QIDETFGRLDVFVNNA 90 (258)
T ss_dssp HHHHHHSCCCEEEECC
T ss_pred HHHHHcCCCCEEEECC
Confidence 124689888774
No 455
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=23.41 E-value=56 Score=28.90 Aligned_cols=67 Identities=15% Similarity=0.238 Sum_probs=37.8
Q ss_pred CCCeEEEEecCChhHHHHH-HHHhCCCCeEEEeccCCHHHHHhhcch-H-HHHHHHHHhCCCEEEEeeeccccC
Q 044601 14 SKQRILLVGEGDFSFSLCL-AREFGFAHNMVATCLDTQETIANKYSN-A-VDNVRELEERGCLVFYGVDAMQMS 84 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aL-a~~~~~~~~l~ATs~ds~~~l~~kY~~-a-~~ni~~L~~~g~~V~~gVDAt~L~ 84 (213)
..++|++||-|.-..-.|. +..++ ..|+--... +.++..++. . ..-.+.|++.|+.++.+..++.+.
T Consensus 186 ~~~~vvViGgG~~g~E~A~~l~~~g--~~Vtlv~~~--~~~l~~~d~~~~~~~~~~l~~~gv~i~~~~~v~~i~ 255 (478)
T 3dk9_A 186 LPGRSVIVGAGYIAVEMAGILSALG--SKTSLMIRH--DKVLRSFDSMISTNCTEELENAGVEVLKFSQVKEVK 255 (478)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTT--CEEEEECSS--SSSCTTSCHHHHHHHHHHHHHTTCEEETTEEEEEEE
T ss_pred cCccEEEECCCHHHHHHHHHHHHcC--CeEEEEEeC--CccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEE
Confidence 3589999999976544443 22344 344333222 122222222 1 233577889999999886666554
No 456
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=23.09 E-value=67 Score=25.54 Aligned_cols=82 Identities=11% Similarity=0.046 Sum_probs=44.2
Q ss_pred CCCCCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEE-EEeeeccccCCCccc
Q 044601 12 YSSKQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLV-FYGVDAMQMSQHFFL 89 (213)
Q Consensus 12 y~~~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V-~~gVDAt~L~~~~~l 89 (213)
..++++||+.|=+.+ .-.++++++ ..+.+|++++..+.+ .....++.+++.+..+ .+..|.++......+
T Consensus 10 ~~~~k~vlITGas~g-iG~~ia~~l~~~G~~v~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~ 81 (256)
T 3ezl_A 10 VMSQRIAYVTGGMGG-IGTSICQRLHKDGFRVVAGCGPNSP-------RRVKWLEDQKALGFDFYASEGNVGDWDSTKQA 81 (256)
T ss_dssp ---CEEEEETTTTSH-HHHHHHHHHHHTTEEEEEEECTTCS-------SHHHHHHHHHHTTCCCEEEECCTTCHHHHHHH
T ss_pred CCCCCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEeCCCHH-------HHHHHHHHHHhcCCeeEEEecCCCCHHHHHHH
Confidence 345688888886543 334444433 125678776632221 1233455666666543 567888876543221
Q ss_pred ------cCCcccEEEEcC
Q 044601 90 ------RTHKFDRVIYNF 101 (213)
Q Consensus 90 ------~~~~FDrIiFNF 101 (213)
...+.|.+|.|=
T Consensus 82 ~~~~~~~~g~id~lv~~A 99 (256)
T 3ezl_A 82 FDKVKAEVGEIDVLVNNA 99 (256)
T ss_dssp HHHHHHHTCCEEEEEECC
T ss_pred HHHHHHhcCCCCEEEECC
Confidence 124689888773
No 457
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=23.06 E-value=2.6e+02 Score=23.74 Aligned_cols=33 Identities=24% Similarity=0.292 Sum_probs=23.8
Q ss_pred CCCCeEEEEec-CChh-HHHHHHHHhCCCCeEEEecc
Q 044601 13 SSKQRILLVGE-GDFS-FSLCLAREFGFAHNMVATCL 47 (213)
Q Consensus 13 ~~~~~ILlVGE-GnFS-FS~aLa~~~~~~~~l~ATs~ 47 (213)
.++++||+.|- |..- .+..||++.| ..++||+-
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~G--a~Vi~~~~ 197 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSG--YIPIATCS 197 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTT--CEEEEEEC
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCC--CEEEEEeC
Confidence 67899999998 5553 4445577765 48888873
No 458
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=23.02 E-value=87 Score=27.57 Aligned_cols=82 Identities=16% Similarity=0.272 Sum_probs=47.4
Q ss_pred CCeEEEEecCChhHHHHH-HHHhCCCCeEEEeccCCHHHHHhhcc-h-HHHHHHHHHhCCCEEEEeeeccccCCCcc-cc
Q 044601 15 KQRILLVGEGDFSFSLCL-AREFGFAHNMVATCLDTQETIANKYS-N-AVDNVRELEERGCLVFYGVDAMQMSQHFF-LR 90 (213)
Q Consensus 15 ~~~ILlVGEGnFSFS~aL-a~~~~~~~~l~ATs~ds~~~l~~kY~-~-a~~ni~~L~~~g~~V~~gVDAt~L~~~~~-l~ 90 (213)
..+|++||-|.-..-.|. ...++..+.|+ +..+.++...+ + +..-.+.|++.|+.++.+...+....... ++
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv----~~~~~ll~~~d~~~~~~~~~~l~~~gV~i~~~~~v~~~~~~~v~~~ 222 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLHPTLI----HRSDKINKLMDADMNQPILDELDKREIPYRLNEEINAINGNEITFK 222 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEE----ESSSCCSTTSCGGGGHHHHHHHHHTTCCEEESCCEEEEETTEEEET
T ss_pred CcEEEEECCccchhhhHHHHHhcCCcceee----eeeccccccccchhHHHHHHHhhccceEEEeccEEEEecCCeeeec
Confidence 579999999986655444 23444333332 22122222221 1 23456889999999999877776654321 11
Q ss_pred ---CCcccEEEEc
Q 044601 91 ---THKFDRVIYN 100 (213)
Q Consensus 91 ---~~~FDrIiFN 100 (213)
...+|.|++-
T Consensus 223 ~g~~~~~D~vl~a 235 (437)
T 4eqs_A 223 SGKVEHYDMIIEG 235 (437)
T ss_dssp TSCEEECSEEEEC
T ss_pred CCeEEeeeeEEEE
Confidence 2357888874
No 459
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=22.98 E-value=44 Score=29.42 Aligned_cols=83 Identities=18% Similarity=0.298 Sum_probs=43.8
Q ss_pred CCCeEEEEecCChhHHHHH-HHHhCCCCeEEEeccCCHHHHHhhc-chH-HHHHHHHHhCCCEEEEeeeccccCCCc---
Q 044601 14 SKQRILLVGEGDFSFSLCL-AREFGFAHNMVATCLDTQETIANKY-SNA-VDNVRELEERGCLVFYGVDAMQMSQHF--- 87 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aL-a~~~~~~~~l~ATs~ds~~~l~~kY-~~a-~~ni~~L~~~g~~V~~gVDAt~L~~~~--- 87 (213)
..++|++||-|.-....|. ++.++ ..|+- ++..+.+.... ++. ..-.+.|++.|+.++.+..++.+....
T Consensus 166 ~~~~vvIiGgG~~g~e~A~~l~~~g--~~V~l--v~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v 241 (455)
T 2yqu_A 166 VPKRLIVVGGGVIGLELGVVWHRLG--AEVIV--LEYMDRILPTMDLEVSRAAERVFKKQGLTIRTGVRVTAVVPEAKGA 241 (455)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTT--CEEEE--ECSSSSSCTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcC--CEEEE--EecCCccccccCHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEE
Confidence 3589999999974444433 22334 33332 22211111111 111 223567888899999887766665321
Q ss_pred cc--c---CCcccEEEEc
Q 044601 88 FL--R---THKFDRVIYN 100 (213)
Q Consensus 88 ~l--~---~~~FDrIiFN 100 (213)
.+ . .-.+|.||+-
T Consensus 242 ~v~~~~g~~i~~D~vv~A 259 (455)
T 2yqu_A 242 RVELEGGEVLEADRVLVA 259 (455)
T ss_dssp EEEETTSCEEEESEEEEC
T ss_pred EEEECCCeEEEcCEEEEC
Confidence 11 1 1358888873
No 460
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=22.92 E-value=31 Score=26.48 Aligned_cols=48 Identities=13% Similarity=0.080 Sum_probs=28.0
Q ss_pred cchHHHHHHHHHhCCCEEEEeee-----ccccCCCccccCCcccEEEEcCCcC
Q 044601 57 YSNAVDNVRELEERGCLVFYGVD-----AMQMSQHFFLRTHKFDRVIYNFPHV 104 (213)
Q Consensus 57 Y~~a~~ni~~L~~~g~~V~~gVD-----At~L~~~~~l~~~~FDrIiFNFPH~ 104 (213)
.|.+.+-|+.|++.|+.|+.--- ...+.......+-.+|.|.+|.|+-
T Consensus 26 ~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~~~~I~~n~P~~ 78 (142)
T 2obb_A 26 IPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLEFYAANKDYPEE 78 (142)
T ss_dssp CTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCCCSEESSSSTTC
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCCeEEEEcCCchh
Confidence 35667778888888887654321 1111122111244678899999974
No 461
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=22.88 E-value=1.3e+02 Score=23.98 Aligned_cols=78 Identities=10% Similarity=0.061 Sum_probs=42.0
Q ss_pred CCCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhC--C-CEEEEeeeccccCCCccc
Q 044601 14 SKQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEER--G-CLVFYGVDAMQMSQHFFL 89 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~--g-~~V~~gVDAt~L~~~~~l 89 (213)
++++||+.|=+.+ --.++++++ ..+.+|++++.+. +.+ ....++|+.. + -...+.+|.++......+
T Consensus 6 ~~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~-~~~-------~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~ 76 (260)
T 2z1n_A 6 QGKLAVVTAGSSG-LGFASALELARNGARLLLFSRNR-EKL-------EAAASRIASLVSGAQVDIVAGDIREPGDIDRL 76 (260)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCH-HHH-------HHHHHHHHHHSTTCCEEEEECCTTCHHHHHHH
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCCEEEEEeCCH-HHH-------HHHHHHHHhcCCCCeEEEEEccCCCHHHHHHH
Confidence 3578999987653 233333332 1256888887753 222 2223444432 3 234566788876543221
Q ss_pred -c-----CCcccEEEEcC
Q 044601 90 -R-----THKFDRVIYNF 101 (213)
Q Consensus 90 -~-----~~~FDrIiFNF 101 (213)
. .. .|.||.|=
T Consensus 77 ~~~~~~~~g-id~lv~~A 93 (260)
T 2z1n_A 77 FEKARDLGG-ADILVYST 93 (260)
T ss_dssp HHHHHHTTC-CSEEEECC
T ss_pred HHHHHHhcC-CCEEEECC
Confidence 1 13 89888774
No 462
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=22.88 E-value=89 Score=27.63 Aligned_cols=16 Identities=25% Similarity=0.567 Sum_probs=13.3
Q ss_pred CCcccEEEEcCCcCCC
Q 044601 91 THKFDRVIYNFPHVGF 106 (213)
Q Consensus 91 ~~~FDrIiFNFPH~G~ 106 (213)
...||+|||+-|-+|.
T Consensus 122 ~~~yD~VIvDtpPtg~ 137 (374)
T 3igf_A 122 SGKYDTIVYDGTGDAF 137 (374)
T ss_dssp TTCCSEEEEECCCSHH
T ss_pred ccCCCEEEEeCCCChH
Confidence 3579999999998773
No 463
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=22.87 E-value=2.8e+02 Score=24.50 Aligned_cols=75 Identities=15% Similarity=0.193 Sum_probs=45.5
Q ss_pred CCCeEEEEecCChhHHHHH-HHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccccCC
Q 044601 14 SKQRILLVGEGDFSFSLCL-AREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLRTH 92 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aL-a~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~~~ 92 (213)
++++|++||=|----|.|. +... +..|+.+=..... . ....+.|++.|+.|..|-++..+- ..
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~--G~~V~~~D~~~~~-----~---~~~~~~L~~~gi~~~~g~~~~~~~------~~ 71 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKL--GAIVTVNDGKPFD-----E---NPTAQSLLEEGIKVVCGSHPLELL------DE 71 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHT--TCEEEEEESSCGG-----G---CHHHHHHHHTTCEEEESCCCGGGG------GS
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhC--CCEEEEEeCCccc-----C---ChHHHHHHhCCCEEEECCChHHhh------cC
Confidence 4689999999965555433 2233 4677665332211 1 123578999999999888765431 12
Q ss_pred cccEEEEcCCcCC
Q 044601 93 KFDRVIYNFPHVG 105 (213)
Q Consensus 93 ~FDrIiFNFPH~G 105 (213)
.+|.||.. |.+.
T Consensus 72 ~~d~vv~s-pgi~ 83 (451)
T 3lk7_A 72 DFCYMIKN-PGIP 83 (451)
T ss_dssp CEEEEEEC-TTSC
T ss_pred CCCEEEEC-CcCC
Confidence 27888875 5544
No 464
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=22.66 E-value=1.2e+02 Score=22.74 Aligned_cols=16 Identities=38% Similarity=0.623 Sum_probs=10.6
Q ss_pred ccCCcccEEEEcCCcCC
Q 044601 89 LRTHKFDRVIYNFPHVG 105 (213)
Q Consensus 89 l~~~~FDrIiFNFPH~G 105 (213)
++.+..|.|| |+|--+
T Consensus 92 i~~g~i~lVI-nt~~~~ 107 (143)
T 2yvq_A 92 IRDGSIDLVI-NLPNNN 107 (143)
T ss_dssp HHTTSCCEEE-ECCCCC
T ss_pred HHCCCceEEE-ECCCCC
Confidence 3467788877 778443
No 465
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=22.62 E-value=98 Score=26.52 Aligned_cols=43 Identities=16% Similarity=0.091 Sum_probs=28.5
Q ss_pred HHHHHHhCCCEEEEeeeccccCCCcc-cc---CCcccEEEEcCCcCC
Q 044601 63 NVRELEERGCLVFYGVDAMQMSQHFF-LR---THKFDRVIYNFPHVG 105 (213)
Q Consensus 63 ni~~L~~~g~~V~~gVDAt~L~~~~~-l~---~~~FDrIiFNFPH~G 105 (213)
-.+.|++.|+.++.+...+.+..... +. ...+|.||+--|..+
T Consensus 224 ~~~~l~~~gV~~~~~~~v~~i~~~~v~~~~g~~~~~D~vi~a~G~~~ 270 (409)
T 3h8l_A 224 VASIYNQLGIKLVHNFKIKEIREHEIVDEKGNTIPADITILLPPYTG 270 (409)
T ss_dssp HHHHHHHHTCEEECSCCEEEECSSEEEETTSCEEECSEEEEECCEEC
T ss_pred HHHHHHHCCCEEEcCCceEEECCCeEEECCCCEEeeeEEEECCCCCc
Confidence 45678889999998876666654311 11 246999999755443
No 466
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=22.58 E-value=1.7e+02 Score=23.68 Aligned_cols=81 Identities=15% Similarity=0.195 Sum_probs=42.6
Q ss_pred CCCeEEEEec-CChhHH--HHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCcccc
Q 044601 14 SKQRILLVGE-GDFSFS--LCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFLR 90 (213)
Q Consensus 14 ~~~~ILlVGE-GnFSFS--~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~ 90 (213)
..++||++|= |..--+ ..|++ .+..|++.+.+... ..-+.....++.|+..|+.++ .+|.++.......
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~---~g~~V~~~~R~~~~---~~~~~~~~~l~~~~~~~v~~v-~~D~~d~~~l~~a- 74 (321)
T 3c1o_A 3 HMEKIIIYGGTGYIGKFMVRASLS---FSHPTFIYARPLTP---DSTPSSVQLREEFRSMGVTII-EGEMEEHEKMVSV- 74 (321)
T ss_dssp -CCCEEEETTTSTTHHHHHHHHHH---TTCCEEEEECCCCT---TCCHHHHHHHHHHHHTTCEEE-ECCTTCHHHHHHH-
T ss_pred cccEEEEEcCCchhHHHHHHHHHh---CCCcEEEEECCccc---ccChHHHHHHHHhhcCCcEEE-EecCCCHHHHHHH-
Confidence 3578999995 554333 33333 25788888876410 000112234556667788765 4576654322111
Q ss_pred CCcccEEEEcCC
Q 044601 91 THKFDRVIYNFP 102 (213)
Q Consensus 91 ~~~FDrIiFNFP 102 (213)
-...|.||.+-+
T Consensus 75 ~~~~d~vi~~a~ 86 (321)
T 3c1o_A 75 LKQVDIVISALP 86 (321)
T ss_dssp HTTCSEEEECCC
T ss_pred HcCCCEEEECCC
Confidence 123788877644
No 467
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=22.48 E-value=49 Score=28.83 Aligned_cols=77 Identities=14% Similarity=0.166 Sum_probs=44.6
Q ss_pred CCeEEEEecCChhHHHHH-HHHhCCCCeEEEeccCCHHHHHhh-cc-hH-HHHHHHHHhCCCEEEEeeeccccCCCcccc
Q 044601 15 KQRILLVGEGDFSFSLCL-AREFGFAHNMVATCLDTQETIANK-YS-NA-VDNVRELEERGCLVFYGVDAMQMSQHFFLR 90 (213)
Q Consensus 15 ~~~ILlVGEGnFSFS~aL-a~~~~~~~~l~ATs~ds~~~l~~k-Y~-~a-~~ni~~L~~~g~~V~~gVDAt~L~~~~~l~ 90 (213)
.++|++||-|.-..-.|. +...+..+.|+ +..+.+..+ ++ .. ..-.+.|++.|+.++.+..++.+. .
T Consensus 146 ~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv----~~~~~~l~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~ig-----~ 216 (385)
T 3klj_A 146 KGKAFIIGGGILGIELAQAIIDSGTPASIG----IILEYPLERQLDRDGGLFLKDKLDRLGIKIYTNSNFEEMG-----D 216 (385)
T ss_dssp HSCEEEECCSHHHHHHHHHHHHHTCCEEEE----CSSSSSCTTTSCHHHHHHHHHHHHTTTCEEECSCCGGGCH-----H
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEE----EcCCccchhhcCHHHHHHHHHHHHhCCCEEEeCCEEEEcC-----e
Confidence 579999998876544443 22344333222 222222222 11 12 223567889999999998887761 1
Q ss_pred CCcccEEEEc
Q 044601 91 THKFDRVIYN 100 (213)
Q Consensus 91 ~~~FDrIiFN 100 (213)
.-.+|.||+-
T Consensus 217 ~~~~D~vv~a 226 (385)
T 3klj_A 217 LIRSSCVITA 226 (385)
T ss_dssp HHHHSEEEEC
T ss_pred EEecCeEEEC
Confidence 2458999875
No 468
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=22.35 E-value=1.1e+02 Score=26.12 Aligned_cols=98 Identities=16% Similarity=0.285 Sum_probs=54.7
Q ss_pred cCCCCCCeEEEEec-CChhHHHH-HHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCc
Q 044601 10 NHYSSKQRILLVGE-GDFSFSLC-LAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHF 87 (213)
Q Consensus 10 ~~y~~~~~ILlVGE-GnFSFS~a-La~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~ 87 (213)
....++++||+.|- |..-.+.+ +++..| ..|++|+.+.+ .++.++++|+....+.+...+.+..
T Consensus 166 ~~~~~g~~vlV~GasggiG~~~~~~a~~~G--a~Vi~~~~~~~------------~~~~~~~~ga~~~~d~~~~~~~~~~ 231 (351)
T 1yb5_A 166 ACVKAGESVLVHGASGGVGLAACQIARAYG--LKILGTAGTEE------------GQKIVLQNGAHEVFNHREVNYIDKI 231 (351)
T ss_dssp SCCCTTCEEEEETCSSHHHHHHHHHHHHTT--CEEEEEESSHH------------HHHHHHHTTCSEEEETTSTTHHHHH
T ss_pred hCCCCcCEEEEECCCChHHHHHHHHHHHCC--CEEEEEeCChh------------HHHHHHHcCCCEEEeCCCchHHHHH
Confidence 34567899999997 77665444 355554 58999876532 1334566787654333221111110
Q ss_pred -c-ccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEE
Q 044601 88 -F-LRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHV 143 (213)
Q Consensus 88 -~-l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihv 143 (213)
. .....+|.||-+ +|. .-+..+..+|+ ++|++.+
T Consensus 232 ~~~~~~~~~D~vi~~---~G~------------------~~~~~~~~~l~-~~G~iv~ 267 (351)
T 1yb5_A 232 KKYVGEKGIDIIIEM---LAN------------------VNLSKDLSLLS-HGGRVIV 267 (351)
T ss_dssp HHHHCTTCEEEEEES---CHH------------------HHHHHHHHHEE-EEEEEEE
T ss_pred HHHcCCCCcEEEEEC---CCh------------------HHHHHHHHhcc-CCCEEEE
Confidence 0 113468988754 231 11344567887 8887644
No 469
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=22.26 E-value=1.2e+02 Score=26.15 Aligned_cols=49 Identities=12% Similarity=0.112 Sum_probs=33.5
Q ss_pred ccCCcccEEEEcC-CcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCC-CeEEEEecc
Q 044601 89 LRTHKFDRVIYNF-PHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEEN-GEIHVTHKE 147 (213)
Q Consensus 89 l~~~~FDrIiFNF-PH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~-G~ihvTl~~ 147 (213)
+...+||.|+-+. |++|.... |+.+.+ .| +.-|.++|+ ++ |...+-+.+
T Consensus 136 l~~~~~DlVlsD~apnsG~~~~-D~~rs~----~L----L~~a~~~Lk-pG~G~FV~KVf~ 186 (277)
T 3evf_A 136 LEPVKCDTLLCDIGESSSSSVT-EGERTV----RV----LDTVEKWLA-CGVDNFCVKVLA 186 (277)
T ss_dssp SCCCCCSEEEECCCCCCSCHHH-HHHHHH----HH----HHHHHHHHT-TCCSEEEEEESC
T ss_pred cCCCCccEEEecCccCcCchHH-HHHHHH----HH----HHHHHHHhC-CCCCeEEEEecC
Confidence 3467899999987 88554211 111211 12 777899998 99 999998887
No 470
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=22.16 E-value=2.9e+02 Score=21.69 Aligned_cols=75 Identities=15% Similarity=0.102 Sum_probs=41.9
Q ss_pred CCCeEEEEecCCh---hHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCccc-
Q 044601 14 SKQRILLVGEGDF---SFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHFFL- 89 (213)
Q Consensus 14 ~~~~ILlVGEGnF---SFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~~l- 89 (213)
++++||+.|=+.+ ..+..|+++ +.+|++++.+.. .+ .+..+++ .+-...+.+|.++......+
T Consensus 8 ~~k~vlITGas~gIG~~~a~~l~~~---G~~V~~~~r~~~-~~-------~~~~~~~--~~~~~~~~~D~~~~~~~~~~~ 74 (261)
T 3n74_A 8 EGKVALITGAGSGFGEGMAKRFAKG---GAKVVIVDRDKA-GA-------ERVAGEI--GDAALAVAADISKEADVDAAV 74 (261)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT---TCEEEEEESCHH-HH-------HHHHHHH--CTTEEEEECCTTSHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC---CCEEEEEcCCHH-HH-------HHHHHHh--CCceEEEEecCCCHHHHHHHH
Confidence 3578999987643 334444433 568888877632 11 1122222 12345677888886643221
Q ss_pred -----cCCcccEEEEcC
Q 044601 90 -----RTHKFDRVIYNF 101 (213)
Q Consensus 90 -----~~~~FDrIiFNF 101 (213)
.....|.+|.|=
T Consensus 75 ~~~~~~~g~id~li~~A 91 (261)
T 3n74_A 75 EAALSKFGKVDILVNNA 91 (261)
T ss_dssp HHHHHHHSCCCEEEECC
T ss_pred HHHHHhcCCCCEEEECC
Confidence 124689888874
No 471
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=22.11 E-value=3.1e+02 Score=22.02 Aligned_cols=79 Identities=15% Similarity=0.133 Sum_probs=45.0
Q ss_pred CCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEE-EEeeeccccCCCccc---
Q 044601 15 KQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLV-FYGVDAMQMSQHFFL--- 89 (213)
Q Consensus 15 ~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V-~~gVDAt~L~~~~~l--- 89 (213)
+++||+.|=+.+ .-+++++++ ..+.+|+++..+..+.+ ....++|++.|..+ .+.+|.++......+
T Consensus 29 ~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~-------~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 100 (283)
T 1g0o_A 29 GKVALVTGAGRG-IGREMAMELGRRGCKVIVNYANSTESA-------EEVVAAIKKNGSDAACVKANVGVVEDIVRMFEE 100 (283)
T ss_dssp TCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESSCHHHH-------HHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCchHHH-------HHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHH
Confidence 577888886543 334444433 13578888887764322 22345566666543 567788775533211
Q ss_pred ---cCCcccEEEEcC
Q 044601 90 ---RTHKFDRVIYNF 101 (213)
Q Consensus 90 ---~~~~FDrIiFNF 101 (213)
.....|.||.|=
T Consensus 101 ~~~~~g~iD~lv~~A 115 (283)
T 1g0o_A 101 AVKIFGKLDIVCSNS 115 (283)
T ss_dssp HHHHHSCCCEEEECC
T ss_pred HHHHcCCCCEEEECC
Confidence 114689888773
No 472
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=21.92 E-value=1.5e+02 Score=23.46 Aligned_cols=77 Identities=12% Similarity=0.083 Sum_probs=43.7
Q ss_pred CCCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCE-EEEeeeccccCCCccc--
Q 044601 14 SKQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCL-VFYGVDAMQMSQHFFL-- 89 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~-V~~gVDAt~L~~~~~l-- 89 (213)
++++||+.|=+.+ --+++++.+ ..+.+|++++.+..+.+.+ .|++.|.. ..+.+|.++......+
T Consensus 6 ~~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~----------~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 74 (249)
T 2ew8_A 6 KDKLAVITGGANG-IGRAIAERFAVEGADIAIADLVPAPEAEA----------AIRNLGRRVLTVKCDVSQPGDVEAFGK 74 (249)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESSCCHHHHH----------HHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEcCCchhHHHH----------HHHhcCCcEEEEEeecCCHHHHHHHHH
Confidence 3578999986543 233444433 1257898888775222221 34455543 3567888876543221
Q ss_pred ----cCCcccEEEEcC
Q 044601 90 ----RTHKFDRVIYNF 101 (213)
Q Consensus 90 ----~~~~FDrIiFNF 101 (213)
.....|.+|.|=
T Consensus 75 ~~~~~~g~id~lv~nA 90 (249)
T 2ew8_A 75 QVISTFGRCDILVNNA 90 (249)
T ss_dssp HHHHHHSCCCEEEECC
T ss_pred HHHHHcCCCCEEEECC
Confidence 124689888774
No 473
>2l69_A Rossmann 2X3 fold protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=21.90 E-value=24 Score=26.25 Aligned_cols=26 Identities=23% Similarity=0.391 Sum_probs=15.8
Q ss_pred HHHHHHHHHhCCCEE---EEeeeccccCC
Q 044601 60 AVDNVRELEERGCLV---FYGVDAMQMSQ 85 (213)
Q Consensus 60 a~~ni~~L~~~g~~V---~~gVDAt~L~~ 85 (213)
++.-|...+++|++| +|+-|-..|.+
T Consensus 64 aekairfvkslgaqvliiiydqdqnrlee 92 (134)
T 2l69_A 64 AEKAIRFVKSLGAQVLIIIYDQDQNRLEE 92 (134)
T ss_dssp HHHHHHHHHHHCCCCEEEEECSCHHHHHH
T ss_pred HHHHHHHHHhcCCeEEEEEEeCchhHHHH
Confidence 455677777777644 45556555543
No 474
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=21.87 E-value=1.8e+02 Score=25.86 Aligned_cols=66 Identities=15% Similarity=0.256 Sum_probs=39.9
Q ss_pred CCCeEEEEecCChhHHHHH-HHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccC
Q 044601 14 SKQRILLVGEGDFSFSLCL-AREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMS 84 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aL-a~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~ 84 (213)
..++|++||-|+-..-.|. +..++ ...|+--...+... .|....-++.+++.|+.++++...+.+.
T Consensus 263 ~gk~VvVIGgG~~a~d~A~~~~r~G-a~~Vtiv~r~~~~~----~p~~~~e~~~~~~~Gv~~~~~~~~~~i~ 329 (456)
T 2vdc_G 263 AGKHVVVLGGGDTAMDCVRTAIRQG-ATSVKCLYRRDRKN----MPGSQREVAHAEEEGVEFIWQAAPEGFT 329 (456)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTT-CSEEEEECSSCSTT----CSSCHHHHHHHHHTTCEEECCSSSCCEE
T ss_pred CCCEEEEECCChhHHHHHHHHHHcC-CCEEEEEEeCCccC----CCCCHHHHHHHHHCCCEEEeCCCceEEe
Confidence 4789999999987665554 33444 22344333332211 1222223678888999999887766654
No 475
>1vf5_H Protein PET N; photosynthesis, membrane protein complex, electron transfer complex; HET: HEM TDS PL9 OPC CLA BCR; 3.00A {Mastigocladus laminosus} SCOP: f.23.27.1 PDB: 2d2c_H* 2e74_H* 2e75_H* 2e76_H* 2zt9_H*
Probab=21.51 E-value=37 Score=19.57 Aligned_cols=8 Identities=25% Similarity=0.854 Sum_probs=6.7
Q ss_pred hhHHHHHH
Q 044601 26 FSFSLCLA 33 (213)
Q Consensus 26 FSFS~aLa 33 (213)
|+||+||.
T Consensus 15 ftfSlslV 22 (29)
T 1vf5_H 15 FTWSIAMV 22 (29)
T ss_dssp HHHHHHHH
T ss_pred hheeeeEE
Confidence 78999985
No 476
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=21.32 E-value=3.1e+02 Score=21.81 Aligned_cols=79 Identities=15% Similarity=0.144 Sum_probs=44.0
Q ss_pred CCCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCC--CE-EEEeeeccccCCCccc
Q 044601 14 SKQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEERG--CL-VFYGVDAMQMSQHFFL 89 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g--~~-V~~gVDAt~L~~~~~l 89 (213)
++++||+.|=+.+ .-.++++.+ ..+.+|++++.+.. . .....++|++.| .. ..+.+|.++......+
T Consensus 31 ~~k~vlVTGasgg-IG~~la~~l~~~G~~V~~~~r~~~-~-------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~ 101 (279)
T 1xg5_A 31 RDRLALVTGASGG-IGAAVARALVQQGLKVVGCARTVG-N-------IEELAAECKSAGYPGTLIPYRCDLSNEEDILSM 101 (279)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESCHH-H-------HHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHH
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCCEEEEEECChH-H-------HHHHHHHHHhcCCCceEEEEEecCCCHHHHHHH
Confidence 3578999986543 223333332 12568888887632 1 122345566655 33 3567888876543211
Q ss_pred ------cCCcccEEEEcC
Q 044601 90 ------RTHKFDRVIYNF 101 (213)
Q Consensus 90 ------~~~~FDrIiFNF 101 (213)
.....|.||.|=
T Consensus 102 ~~~~~~~~g~iD~vi~~A 119 (279)
T 1xg5_A 102 FSAIRSQHSGVDICINNA 119 (279)
T ss_dssp HHHHHHHHCCCSEEEECC
T ss_pred HHHHHHhCCCCCEEEECC
Confidence 113689888764
No 477
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=20.93 E-value=3.2e+02 Score=21.71 Aligned_cols=80 Identities=19% Similarity=0.164 Sum_probs=46.1
Q ss_pred CCCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCE-EEEeeeccccCCCccc--
Q 044601 14 SKQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCL-VFYGVDAMQMSQHFFL-- 89 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~-V~~gVDAt~L~~~~~l-- 89 (213)
+++++|+.|=+.+ .-+++++.+ ..+.+|+.++..+.+. .....++|++.|.. ..+.+|.++......+
T Consensus 7 ~~k~vlVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 78 (259)
T 3edm_A 7 TNRTIVVAGAGRD-IGRACAIRFAQEGANVVLTYNGAAEG-------AATAVAEIEKLGRSALAIKADLTNAAEVEAAIS 78 (259)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEECSSCHH-------HHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCCEEEEEcCCCHHH-------HHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHH
Confidence 4678999986643 334444433 1256788774443322 23345667776653 4567888886643221
Q ss_pred ----cCCcccEEEEcC
Q 044601 90 ----RTHKFDRVIYNF 101 (213)
Q Consensus 90 ----~~~~FDrIiFNF 101 (213)
+..+.|.+|.|=
T Consensus 79 ~~~~~~g~id~lv~nA 94 (259)
T 3edm_A 79 AAADKFGEIHGLVHVA 94 (259)
T ss_dssp HHHHHHCSEEEEEECC
T ss_pred HHHHHhCCCCEEEECC
Confidence 124689888774
No 478
>1q90_N Cytochrome B6F complex subunit PETN; membrane protein complex, photosynthesis, electron transfer, oxydoreductase, chlorophyll; HET: HEM CL1 BCR TDS SQD LFA LMG; 3.10A {Chlamydomonas reinhardtii} SCOP: f.23.27.1
Probab=20.81 E-value=39 Score=19.78 Aligned_cols=9 Identities=67% Similarity=0.910 Sum_probs=7.2
Q ss_pred hhHHHHHHH
Q 044601 26 FSFSLCLAR 34 (213)
Q Consensus 26 FSFS~aLa~ 34 (213)
|+||+||..
T Consensus 17 fTfSlslVV 25 (31)
T 1q90_N 17 FSFSLSLVV 25 (31)
T ss_dssp HHHHHHHHH
T ss_pred hheeeEEEE
Confidence 789999853
No 479
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=20.77 E-value=1.2e+02 Score=25.68 Aligned_cols=97 Identities=10% Similarity=0.069 Sum_probs=54.4
Q ss_pred CCCCCCeEEEEe-cCChhHHHHH-HHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCCc-
Q 044601 11 HYSSKQRILLVG-EGDFSFSLCL-AREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQHF- 87 (213)
Q Consensus 11 ~y~~~~~ILlVG-EGnFSFS~aL-a~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~~- 87 (213)
...++++||+.| -|..-.+.+. ++..| .+|++|+.+.+ .++.++++|+....+.+...+.+..
T Consensus 159 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G--a~Vi~~~~~~~------------~~~~~~~~g~~~~~~~~~~~~~~~~~ 224 (354)
T 2j8z_A 159 NVQAGDYVLIHAGLSGVGTAAIQLTRMAG--AIPLVTAGSQK------------KLQMAEKLGAAAGFNYKKEDFSEATL 224 (354)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTT--CEEEEEESCHH------------HHHHHHHHTCSEEEETTTSCHHHHHH
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHHcC--CEEEEEeCCHH------------HHHHHHHcCCcEEEecCChHHHHHHH
Confidence 456789999999 6877655444 55554 58999876521 1233455577544333221111110
Q ss_pred c-ccCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEE
Q 044601 88 F-LRTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHV 143 (213)
Q Consensus 88 ~-l~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihv 143 (213)
. .....+|.||-+- |.. -+..+..+|+ ++|.|.+
T Consensus 225 ~~~~~~~~d~vi~~~---G~~------------------~~~~~~~~l~-~~G~iv~ 259 (354)
T 2j8z_A 225 KFTKGAGVNLILDCI---GGS------------------YWEKNVNCLA-LDGRWVL 259 (354)
T ss_dssp HHTTTSCEEEEEESS---CGG------------------GHHHHHHHEE-EEEEEEE
T ss_pred HHhcCCCceEEEECC---Cch------------------HHHHHHHhcc-CCCEEEE
Confidence 0 1134689887653 321 1345667887 8887654
No 480
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=20.67 E-value=3e+02 Score=23.20 Aligned_cols=99 Identities=16% Similarity=0.206 Sum_probs=56.8
Q ss_pred cCCCCCCeEEEEecCChhH-HHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCCC-c
Q 044601 10 NHYSSKQRILLVGEGDFSF-SLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQH-F 87 (213)
Q Consensus 10 ~~y~~~~~ILlVGEGnFSF-S~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~~-~ 87 (213)
....++++||++|-|..-- +..||++.| .++++|+... ++++.++++|+...++-+...+.+. .
T Consensus 185 ~~~~~g~~VlV~G~G~vG~~a~qla~~~G--a~Vi~~~~~~------------~~~~~~~~lGa~~vi~~~~~~~~~~v~ 250 (363)
T 3uog_A 185 GHLRAGDRVVVQGTGGVALFGLQIAKATG--AEVIVTSSSR------------EKLDRAFALGADHGINRLEEDWVERVY 250 (363)
T ss_dssp TCCCTTCEEEEESSBHHHHHHHHHHHHTT--CEEEEEESCH------------HHHHHHHHHTCSEEEETTTSCHHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEecCc------------hhHHHHHHcCCCEEEcCCcccHHHHHH
Confidence 4456789999999775543 334466665 4899987542 2355667788865543211121111 0
Q ss_pred cc-cCCcccEEEEcCCcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCCeEEEE
Q 044601 88 FL-RTHKFDRVIYNFPHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENGEIHVT 144 (213)
Q Consensus 88 ~l-~~~~FDrIiFNFPH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G~ihvT 144 (213)
.+ ....+|.|+=+ +|.. -+..+..+|+ ++|+|.+.
T Consensus 251 ~~~~g~g~D~vid~---~g~~------------------~~~~~~~~l~-~~G~iv~~ 286 (363)
T 3uog_A 251 ALTGDRGADHILEI---AGGA------------------GLGQSLKAVA-PDGRISVI 286 (363)
T ss_dssp HHHTTCCEEEEEEE---TTSS------------------CHHHHHHHEE-EEEEEEEE
T ss_pred HHhCCCCceEEEEC---CChH------------------HHHHHHHHhh-cCCEEEEE
Confidence 01 23468977654 3321 1445677887 88886654
No 481
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=20.59 E-value=2e+02 Score=22.47 Aligned_cols=78 Identities=15% Similarity=0.168 Sum_probs=41.2
Q ss_pred CCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHHHh-CCC-EEEEeeeccccCCCccc--
Q 044601 15 KQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVRELEE-RGC-LVFYGVDAMQMSQHFFL-- 89 (213)
Q Consensus 15 ~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~-~g~-~V~~gVDAt~L~~~~~l-- 89 (213)
+++||+.|=+.+ .-.++++.+ ..+.+|++++.+... ....+++|.+ .+. ...+.+|.++......+
T Consensus 14 ~k~vlITGasgg-iG~~~a~~l~~~G~~V~~~~r~~~~--------~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~ 84 (265)
T 1h5q_A 14 NKTIIVTGGNRG-IGLAFTRAVAAAGANVAVIYRSAAD--------AVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQ 84 (265)
T ss_dssp TEEEEEETTTSH-HHHHHHHHHHHTTEEEEEEESSCTT--------HHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHH
T ss_pred CCEEEEECCCch-HHHHHHHHHHHCCCeEEEEeCcchh--------hHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHH
Confidence 568999986543 233344333 125688888875422 1112333332 233 34567888876532211
Q ss_pred ----cCCcccEEEEcC
Q 044601 90 ----RTHKFDRVIYNF 101 (213)
Q Consensus 90 ----~~~~FDrIiFNF 101 (213)
.....|.||.|=
T Consensus 85 ~~~~~~~~id~li~~A 100 (265)
T 1h5q_A 85 QIDADLGPISGLIANA 100 (265)
T ss_dssp HHHHHSCSEEEEEECC
T ss_pred HHHHhcCCCCEEEECC
Confidence 124688888763
No 482
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=20.55 E-value=77 Score=26.13 Aligned_cols=35 Identities=17% Similarity=0.345 Sum_probs=25.5
Q ss_pred CCCCCeEEEEec-CChh-HHHHHHHHhCCCCeEEEeccC
Q 044601 12 YSSKQRILLVGE-GDFS-FSLCLAREFGFAHNMVATCLD 48 (213)
Q Consensus 12 y~~~~~ILlVGE-GnFS-FS~aLa~~~~~~~~l~ATs~d 48 (213)
..++++||++|= |..- .+..+|+..| .+|++|+.+
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~G--a~Vi~~~~~ 159 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMG--LRVLAAASR 159 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTT--CEEEEEESS
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCC--CEEEEEeCC
Confidence 567899999997 7664 3445577765 489998875
No 483
>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}
Probab=20.42 E-value=1.8e+02 Score=26.51 Aligned_cols=85 Identities=19% Similarity=0.196 Sum_probs=50.9
Q ss_pred CCCCCCeEEEEecCChhHHHHHHHHh-CCCC-eEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEE-EEeeeccccCCCc
Q 044601 11 HYSSKQRILLVGEGDFSFSLCLAREF-GFAH-NMVATCLDTQETIANKYSNAVDNVRELEERGCLV-FYGVDAMQMSQHF 87 (213)
Q Consensus 11 ~y~~~~~ILlVGEGnFSFS~aLa~~~-~~~~-~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V-~~gVDAt~L~~~~ 87 (213)
.+.++.+||+.|=..+ --.+|++++ ..+. +|+.++....+ -+...+.+++|++.|++| .+.+|.++.....
T Consensus 255 ~~~~~~~vLITGgtGg-IG~~lA~~La~~G~~~vvl~~R~~~~-----~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~ 328 (511)
T 2z5l_A 255 SWQPSGTVLITGGMGA-IGRRLARRLAAEGAERLVLTSRRGPE-----APGAAELAEELRGHGCEVVHAACDVAERDALA 328 (511)
T ss_dssp CCCCCSEEEEETTTSH-HHHHHHHHHHHTTCSEEEEEESSGGG-----STTHHHHHHHHHTTTCEEEEEECCSSCHHHHH
T ss_pred CcCCCCEEEEECCCCH-HHHHHHHHHHhCCCcEEEEEecCCcc-----cHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHH
Confidence 3667899999986543 233333333 1133 68888776421 123455678888889876 4568888765432
Q ss_pred c-ccCCcccEEEEcC
Q 044601 88 F-LRTHKFDRVIYNF 101 (213)
Q Consensus 88 ~-l~~~~FDrIiFNF 101 (213)
. +.....|.||.|=
T Consensus 329 ~~~~~~~ld~VVh~A 343 (511)
T 2z5l_A 329 ALVTAYPPNAVFHTA 343 (511)
T ss_dssp HHHHHSCCSEEEECC
T ss_pred HHHhcCCCcEEEECC
Confidence 2 1125688888764
No 484
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=20.42 E-value=1.1e+02 Score=24.73 Aligned_cols=78 Identities=17% Similarity=0.213 Sum_probs=42.7
Q ss_pred CCeEEEEecCChhHHHHHHHHh-CCCCeEEEeccCCHHHHHhhcchHHHHHHHH-HhCCCE-EEEeeeccccCCCccc--
Q 044601 15 KQRILLVGEGDFSFSLCLAREF-GFAHNMVATCLDTQETIANKYSNAVDNVREL-EERGCL-VFYGVDAMQMSQHFFL-- 89 (213)
Q Consensus 15 ~~~ILlVGEGnFSFS~aLa~~~-~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L-~~~g~~-V~~gVDAt~L~~~~~l-- 89 (213)
+++||+.|=+.+ .-+++++.+ ..+.+|++++.+. +.+ ....++| +..|.. ..+.+|.++......+
T Consensus 21 ~k~~lVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~-~~~-------~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~ 91 (267)
T 1vl8_A 21 GRVALVTGGSRG-LGFGIAQGLAEAGCSVVVASRNL-EEA-------SEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLE 91 (267)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCH-HHH-------HHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHH
T ss_pred CCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCH-HHH-------HHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHH
Confidence 578999986543 233343332 1257888887763 222 2223444 333543 3567788876533211
Q ss_pred ----cCCcccEEEEcC
Q 044601 90 ----RTHKFDRVIYNF 101 (213)
Q Consensus 90 ----~~~~FDrIiFNF 101 (213)
.....|.||.|=
T Consensus 92 ~~~~~~g~iD~lvnnA 107 (267)
T 1vl8_A 92 AVKEKFGKLDTVVNAA 107 (267)
T ss_dssp HHHHHHSCCCEEEECC
T ss_pred HHHHHcCCCCEEEECC
Confidence 124689988774
No 485
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=20.24 E-value=1.2e+02 Score=25.99 Aligned_cols=118 Identities=11% Similarity=0.042 Sum_probs=66.2
Q ss_pred ccccccccCCCCCCeEEEEecCChhHHHHHHHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEE---eee
Q 044601 3 TETEKWSNHYSSKQRILLVGEGDFSFSLCLAREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFY---GVD 79 (213)
Q Consensus 3 ~~~~k~~~~y~~~~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~---gVD 79 (213)
+..+|. .+++.++||=+|=+==|.|.-.++..+- ..+.+...-.--.+...-| ...|+.++. |+|
T Consensus 64 EIdeK~--likpg~~VVDLGaAPGGWSQvAa~~~~v-g~V~G~vig~D~~~~P~~~---------~~~Gv~~i~~~~G~D 131 (269)
T 2px2_A 64 WLVERR--FVQPIGKVVDLGCGRGGWSYYAATMKNV-QEVRGYTKGGPGHEEPMLM---------QSYGWNIVTMKSGVD 131 (269)
T ss_dssp HHHHTT--SCCCCEEEEEETCTTSHHHHHHTTSTTE-EEEEEECCCSTTSCCCCCC---------CSTTGGGEEEECSCC
T ss_pred HHHHcC--CCCCCCEEEEcCCCCCHHHHHHhhhcCC-CCceeEEEccccccCCCcc---------cCCCceEEEeeccCC
Confidence 344564 6778899999998877777777665221 1222222211000000000 003653333 788
Q ss_pred ccccCCCccccCCcccEEEEcC-CcCCCcccccchHHHHhhHHHHHHHHHHHHhhcccCCC-eEEEEeccC
Q 044601 80 AMQMSQHFFLRTHKFDRVIYNF-PHVGFIFRENSYCQIQLNKELVKGFLRNAKLLLKEENG-EIHVTHKEG 148 (213)
Q Consensus 80 At~L~~~~~l~~~~FDrIiFNF-PH~G~~~~e~~~~~i~~n~~Ll~~Ff~Sa~~~L~~~~G-~ihvTl~~~ 148 (213)
.+.+. ..++|.|+-+- |-+|.. .-|+.|.+. -+.=|.++|+ ++| ...|-+.++
T Consensus 132 f~~~~------~~~~DvVLSDMAPnSG~~-~vD~~Rs~~--------aL~~A~~~Lk-~gG~~FvvKVFqg 186 (269)
T 2px2_A 132 VFYKP------SEISDTLLCDIGESSPSA-EIEEQRTLR--------ILEMVSDWLS-RGPKEFCIKILCP 186 (269)
T ss_dssp GGGSC------CCCCSEEEECCCCCCSCH-HHHHHHHHH--------HHHHHHHHHT-TCCSEEEEEESCT
T ss_pred ccCCC------CCCCCEEEeCCCCCCCcc-HHHHHHHHH--------HHHHHHHHhh-cCCcEEEEEECCC
Confidence 88753 56799999987 543332 122333332 3344678998 999 888888884
No 486
>3r8s_R 50S ribosomal protein L21; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1vs8_R 1vs6_R 2aw4_R 2awb_R 1vt2_R 2i2v_R 2j28_R 2i2t_R* 2qao_R* 2qba_R* 2qbc_R* 2qbe_R 2qbg_R 2qbi_R* 2qbk_R* 2qov_R 2qox_R 2qoz_R* 2qp1_R* 2rdo_R ...
Probab=20.17 E-value=40 Score=24.81 Aligned_cols=30 Identities=13% Similarity=0.193 Sum_probs=19.6
Q ss_pred CeEEEEecCChhHHHHHHHHhCCCCeEEEeccC
Q 044601 16 QRILLVGEGDFSFSLCLAREFGFAHNMVATCLD 48 (213)
Q Consensus 16 ~~ILlVGEGnFSFS~aLa~~~~~~~~l~ATs~d 48 (213)
++||+||+||+.- +-+-+-.+..|.||..+
T Consensus 36 ~~VLlv~~~~~~~---iG~P~v~~a~V~a~V~~ 65 (103)
T 3r8s_R 36 AEVLMIANGEEVK---IGVPFVDGGVIKAEVVA 65 (103)
T ss_dssp CCEEEEESSSEEE---CSSSSCTTCEEEEEEEE
T ss_pred eEEEEEecCCCEE---ECCcccCCcEEEEEEEe
Confidence 5789999998731 21222235688888876
No 487
>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*
Probab=20.15 E-value=1.2e+02 Score=27.17 Aligned_cols=88 Identities=18% Similarity=0.276 Sum_probs=52.2
Q ss_pred CCCCCeEEEEecC-ChhHHHHHHHHhCC-CCeEEEeccCCHHHHHh-----hcchHHHHHHHHHhCCCE-EEEeeecccc
Q 044601 12 YSSKQRILLVGEG-DFSFSLCLAREFGF-AHNMVATCLDTQETIAN-----KYSNAVDNVRELEERGCL-VFYGVDAMQM 83 (213)
Q Consensus 12 y~~~~~ILlVGEG-nFSFS~aLa~~~~~-~~~l~ATs~ds~~~l~~-----kY~~a~~ni~~L~~~g~~-V~~gVDAt~L 83 (213)
+..++++|+.|=+ ..-.+.++++++.. +.+|+.++++....... -| +...-.+.+++.|.. ..+.+|+++.
T Consensus 57 ~~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~Dvtd~ 135 (418)
T 4eue_A 57 FRGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWY-NNIFFKEFAKKKGLVAKNFIEDAFSN 135 (418)
T ss_dssp CCCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHH-HHHHHHHHHHHTTCCEEEEESCTTCH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccc-hHHHHHHHHHHcCCcEEEEEeeCCCH
Confidence 4668899999854 45566557777643 67898888874321100 01 111222344556654 4677899886
Q ss_pred CCCccc------cCCcccEEEEc
Q 044601 84 SQHFFL------RTHKFDRVIYN 100 (213)
Q Consensus 84 ~~~~~l------~~~~FDrIiFN 100 (213)
.....+ ...+.|.+|.|
T Consensus 136 ~~v~~~v~~i~~~~G~IDiLVnN 158 (418)
T 4eue_A 136 ETKDKVIKYIKDEFGKIDLFVYS 158 (418)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCCEEEEC
Confidence 643221 23679999988
No 488
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=20.08 E-value=1e+02 Score=25.78 Aligned_cols=85 Identities=20% Similarity=0.192 Sum_probs=46.2
Q ss_pred CCCeEEEEecCCh---hHHHHHHHHhCCCCeEEEeccCCH-HHH-HhhcchHHHHHHHHHhCCCEE-EEeeeccccCCCc
Q 044601 14 SKQRILLVGEGDF---SFSLCLAREFGFAHNMVATCLDTQ-ETI-ANKYSNAVDNVRELEERGCLV-FYGVDAMQMSQHF 87 (213)
Q Consensus 14 ~~~~ILlVGEGnF---SFS~aLa~~~~~~~~l~ATs~ds~-~~l-~~kY~~a~~ni~~L~~~g~~V-~~gVDAt~L~~~~ 87 (213)
+++++|+.|=+.+ ..+..|+++ +.+|+++..+.. +.. ...-.......++|++.|..+ .+.+|.++.....
T Consensus 26 ~gk~vlVTGas~GIG~aia~~la~~---G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~ 102 (322)
T 3qlj_A 26 DGRVVIVTGAGGGIGRAHALAFAAE---GARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAA 102 (322)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHT---TCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC---CCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHH
Confidence 3578888886532 334444433 568888876510 000 000012345567777777655 5677888765432
Q ss_pred cc------cCCcccEEEEcC
Q 044601 88 FL------RTHKFDRVIYNF 101 (213)
Q Consensus 88 ~l------~~~~FDrIiFNF 101 (213)
.+ ...+.|.+|.|=
T Consensus 103 ~~~~~~~~~~g~iD~lv~nA 122 (322)
T 3qlj_A 103 GLIQTAVETFGGLDVLVNNA 122 (322)
T ss_dssp HHHHHHHHHHSCCCEEECCC
T ss_pred HHHHHHHHHcCCCCEEEECC
Confidence 21 114688887763
No 489
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=20.07 E-value=1.6e+02 Score=29.05 Aligned_cols=61 Identities=15% Similarity=0.165 Sum_probs=39.9
Q ss_pred CCCeEEEEecCChhHHHHH-HHHhCCCCeEEEeccCCHHHHHhhcchHHHHHHHHHhCCCEEEEeeeccccCC
Q 044601 14 SKQRILLVGEGDFSFSLCL-AREFGFAHNMVATCLDTQETIANKYSNAVDNVRELEERGCLVFYGVDAMQMSQ 85 (213)
Q Consensus 14 ~~~~ILlVGEGnFSFS~aL-a~~~~~~~~l~ATs~ds~~~l~~kY~~a~~ni~~L~~~g~~V~~gVDAt~L~~ 85 (213)
..++|++||-|+...-.|. +..++..+.|+-..-. +.. . .+.|++.|+.|+.+..++.+..
T Consensus 283 ~gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~----~~~-----~--~~~l~~~GV~v~~~~~v~~i~~ 344 (965)
T 2gag_A 283 AGARIAVATTNDSAYELVRELAATGGVVAVIDARSS----ISA-----A--AAQAVADGVQVISGSVVVDTEA 344 (965)
T ss_dssp SCSSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSS----CCH-----H--HHHHHHTTCCEEETEEEEEEEE
T ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCc----cch-----h--HHHHHhCCeEEEeCCEeEEEec
Confidence 3589999999997766554 2344545444433211 111 1 6788999999999987777653
Done!