BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044605
(405 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q7XA39|RGA4_SOLBU Putative disease resistance protein RGA4 OS=Solanum bulbocastanum
GN=RGA4 PE=2 SV=1
Length = 988
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 178/387 (45%), Gaps = 45/387 (11%)
Query: 42 PLRIGKLTSLRTLTKFAVGKSNCSGLSELRSSTLLHEKLTILGLENVNVAEDAKEGNRTT 101
P RIG LT L+TL F VG L EL++ L ++I LE V DA E N +
Sbjct: 613 PPRIGLLTCLKTLGFFIVGSKKGYQLGELKNLNLCG-SISITHLERVKNDTDA-EANLSA 670
Query: 102 SSDSREVA------------EIQTRVLEMLKPHYGLKELKVQNYGGTKFPAWLGQSSFEN 149
++ + ++ + +VLE LKPH LK L++ +GG +FP+W+ S E
Sbjct: 671 KANLQSLSMSWDNDGPNRYESKEVKVLEALKPHPNLKYLEIIAFGGFRFPSWINHSVLEK 730
Query: 150 LVVLRFRNCNQCTSLPSVGHLPLLKNLVIKGMG---RMAKAGTTGGDQQAAKGFPCLREL 206
++ +R ++C C LP G LP L+NL ++ + + FP L++L
Sbjct: 731 VISVRIKSCKNCLCLPPFGELPCLENLELQNGSAEVEYVEEDDVHSRFSTRRSFPSLKKL 790
Query: 207 SIINCSKLKGRLPQH----FSSLERIVIMSCEQLLVSCTTLPLLCELEIDGFGEVAWINR 262
I LKG + + F LE + I+ C L TL + +LE+ G ++
Sbjct: 791 RIWFFRSLKGLMKEEGEEKFPMLEEMAILYCP--LFVFPTLSSVKKLEVHGNTNTRGLSS 848
Query: 263 PVEAGIFDSSNPG--------PEKSRTEVLPWEIGS----PDQESLPEGLHKLSHITRIS 310
S G PE+ T + E S + + LP L L+ + R+
Sbjct: 849 ISNLSTLTSLRIGANYRATSLPEEMFTSLTNLEFLSFFDFKNLKDLPTSLTSLNALKRLQ 908
Query: 311 IVG-SYLVSFPKGGLESLSFVRNLTSLERLELSRCPILKSFPENGL--LPSVVYLSIYLC 367
I L SFP+ GLE LTSL +L + C +LK PE GL L ++ L + C
Sbjct: 909 IESCDSLESFPEQGLEG------LTSLTQLFVKYCKMLKCLPE-GLQHLTALTNLGVSGC 961
Query: 368 PDLEEKCKKDEREYCHLVADIPFVQLN 394
P++E++C K+ E H +A IP + ++
Sbjct: 962 PEVEKRCDKEIGEDWHKIAHIPNLDIH 988
>sp|Q9LRR4|R13L1_ARATH Putative disease resistance RPP13-like protein 1 OS=Arabidopsis
thaliana GN=RPPL1 PE=3 SV=1
Length = 1054
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/259 (32%), Positives = 117/259 (45%), Gaps = 55/259 (21%)
Query: 28 YLILVGDLTESKEMPLRIGKLTSLRTLTKFAVGKSNCSGLSELRSSTLLHEKLTILGLEN 87
YL L+G T+ ++MP R G+L SL+TLT F V S+ S +SEL LH KL I+ L+
Sbjct: 653 YLDLIG--TKLRQMPRRFGRLKSLQTLTTFFVSASDGSRISELGGLHDLHGKLKIVELQR 710
Query: 88 VNVAEDAKEGNRTTSSDSREV-------------------AEIQTRVLEMLKPHYGLKEL 128
V DA E N + RE+ + + V E L+PH +++L
Sbjct: 711 VVDVADAAEANLNSKKHLREIDFVWRTGSSSSENNTNPHRTQNEAEVFEKLRPHRHIEKL 770
Query: 129 KVQNYGGTKFPAWLGQSSFENLVVLRFRNCNQCTSLPSVGHLPLLKNLVIKGMGRMAKAG 188
++ Y G +FP WL SF +V +R R C CTSLPS+G LP LK L I GM + G
Sbjct: 771 AIERYKGRRFPDWLSDPSFSRIVCIRLRECQYCTSLPSLGQLPCLKELHISGMVGLQSIG 830
Query: 189 TTGG--------------------------------DQQAAKG--FPCLRELSIINCSKL 214
D + +G FP L++L I+ C +L
Sbjct: 831 RKFYFSDQQLRDQDQQPFRSLETLRFDNLPDWQEWLDVRVTRGDLFPSLKKLFILRCPEL 890
Query: 215 KGRLPQHFSSLERIVIMSC 233
G LP SL + I C
Sbjct: 891 TGTLPTFLPSLISLHIYKC 909
>sp|Q7XA42|RGA1_SOLBU Putative disease resistance protein RGA1 OS=Solanum bulbocastanum
GN=RGA1 PE=2 SV=2
Length = 979
Score = 115 bits (288), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 113/379 (29%), Positives = 177/379 (46%), Gaps = 40/379 (10%)
Query: 42 PLRIGKLTSLRTLTKFAVGKSNCSGLSELRSSTLLHEKLTILGLENVNVAEDAKEGNRTT 101
P RIG LT L++L+ F +GK L EL++ L + ++I L+ V DAKE N +
Sbjct: 612 PPRIGLLTCLKSLSCFVIGKRKGHQLGELKNLNL-YGSISITKLDRVKKDTDAKEANLSA 670
Query: 102 SSDSREVA---------EIQTRVLEMLKPHYGLKELKVQNYGGTKFPAWLGQSSFENLVV 152
++ + + VLE LKPH LK L++ +GG + P W+ QS +N+V
Sbjct: 671 KANLHSLCLSWDLDGKHRYDSEVLEALKPHSNLKYLEINGFGGIRLPDWMNQSVLKNVVS 730
Query: 153 LRFRNCNQCTSLPSVGHLPLLKNLVIKGMGRMAKAGTTGGDQQAAKG-FPCLRELSIINC 211
+R R C C+ LP G LP L++L + A + G FP LR+L I +
Sbjct: 731 IRIRGCENCSCLPPFGELPCLESLEL----HTGSADVEYVEDNVHPGRFPSLRKLVIWDF 786
Query: 212 SKLKGRLP----QHFSSLERIVIMSCEQLLV----SCTTLPLLCELEIDGFGEVAWINRP 263
S LKG L + F LE + C ++ S TL ++ + ++ +
Sbjct: 787 SNLKGLLKMEGEKQFPVLEEMTFYWCPMFVIPTLSSVKTLKVIVT-DATVLRSISNLRAL 845
Query: 264 VEAGIFDS--SNPGPE---KSRTEVLPWEIG-SPDQESLPEGLHKLSHITRISI-VGSYL 316
I D+ + PE KS + +I + + LP L L+ + + L
Sbjct: 846 TSLDISDNVEATSLPEEMFKSLANLKYLKISFFRNLKELPTSLASLNALKSLKFEFCDAL 905
Query: 317 VSFPKGGLESLSFVRNLTSLERLELSRCPILKSFPENGL--LPSVVYLSIYLCPDLEEKC 374
S P+ G V+ LTSL L +S C +LK PE GL L ++ L+I CP + ++C
Sbjct: 906 ESLPEEG------VKGLTSLTELSVSNCMMLKCLPE-GLQHLTALTTLTITQCPIVFKRC 958
Query: 375 KKDEREYCHLVADIPFVQL 393
++ E H +A IP++ L
Sbjct: 959 ERGIGEDWHKIAHIPYLTL 977
>sp|Q7XA40|RGA3_SOLBU Putative disease resistance protein RGA3 OS=Solanum bulbocastanum
GN=RGA3 PE=2 SV=2
Length = 992
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 116/391 (29%), Positives = 176/391 (45%), Gaps = 38/391 (9%)
Query: 31 LVGDLTESKEMPLRIGKLTSLRTLTKFAVGKSNCSGLSELRSSTLLHEKLTILGLENVNV 90
LV D MP RIG LT L+TL F VG+ L ELR+ L ++I LE V
Sbjct: 610 LVLDHCPLTSMPPRIGLLTCLKTLGYFVVGERKGYQLGELRNLNL-RGAISITHLERVKN 668
Query: 91 AEDAKEGNRTTSSD-----------SREVAEIQTRVLEMLKPHYGLKELKVQNYGGTKFP 139
+AKE N + ++ +R +E + +VLE LKPH LK L++ ++ G P
Sbjct: 669 DMEAKEANLSAKANLHSLSMSWDRPNRYESE-EVKVLEALKPHPNLKYLEIIDFCGFCLP 727
Query: 140 AWLGQSSFENLVVLRFRNCNQCTSLPSVGHLPLLKNLVIKGMGRMAKAGTTGGDQQAAKG 199
W+ S +N+V + C C+ LP G LP L++L ++ G + +
Sbjct: 728 DWMNHSVLKNVVSILISGCENCSCLPPFGELPCLESLELQD-GSVEVEYVEDSGFLTRRR 786
Query: 200 FPCLRELSIINCSKLKG----RLPQHFSSLERIVIMSCEQL----LVSCTTLPLLCELEI 251
FP LR+L I LKG + + F LE + I C L S L + E +
Sbjct: 787 FPSLRKLHIGGFCNLKGLQRMKGAEQFPVLEEMKISDCPMFVFPTLSSVKKLEIWGEADA 846
Query: 252 DGFGEVAWINRPVEAGIFDSSNPGP-----EKSRTEVLPWEIGSPDQ-ESLPEGLHKLSH 305
G ++ ++ IF + K+ ++ + + + LP L L++
Sbjct: 847 GGLSSISNLSTLTSLKIFSNHTVTSLLEEMFKNLENLIYLSVSFLENLKELPTSLASLNN 906
Query: 306 ITRISIVGSY-LVSFPKGGLESLSFVRNLTSLERLELSRCPILKSFPENGL--LPSVVYL 362
+ + I Y L S P+ GLE LS SL L + C +LK PE GL L ++ L
Sbjct: 907 LKCLDIRYCYALESLPEEGLEGLS------SLTELFVEHCNMLKCLPE-GLQHLTTLTSL 959
Query: 363 SIYLCPDLEEKCKKDEREYCHLVADIPFVQL 393
I CP L ++C+K E H ++ IP V +
Sbjct: 960 KIRGCPQLIKRCEKGIGEDWHKISHIPNVNI 990
>sp|Q7XBQ9|RGA2_SOLBU Disease resistance protein RGA2 OS=Solanum bulbocastanum GN=RGA2
PE=1 SV=1
Length = 970
Score = 113 bits (282), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 118/378 (31%), Positives = 169/378 (44%), Gaps = 46/378 (12%)
Query: 41 MPLRIGKLTSLRTLTKFAVGKSNCSGLSELRSSTLLHEKLTILGLENVNVAEDAKEGNRT 100
MP RIG LT L+TL +F VG+ L EL + L + + I LE V +DAKE N +
Sbjct: 612 MPPRIGSLTCLKTLGQFVVGRKKGYQLGELGNLNL-YGSIKISHLERVKNDKDAKEANLS 670
Query: 101 TSSDSREVA------------EIQTRVLEMLKPHYGLKELKVQNYGGTKFPAWLGQSSFE 148
+ ++ + +VLE LKPH L LK+ + G P W+ S +
Sbjct: 671 AKGNLHSLSMSWNNFGPHIYESEEVKVLEALKPHSNLTSLKIYGFRGIHLPEWMNHSVLK 730
Query: 149 NLVVLRFRNCNQCTSLPSVGHLPLLKNLVIKGMGRMAKAGTTGGDQQAAKGFPC------ 202
N+V + N C+ LP G LP L++L + G D GFP
Sbjct: 731 NIVSILISNFRNCSCLPPFGDLPCLESLELH-WGSADVEYVEEVDIDVHSGFPTRIRFPS 789
Query: 203 LRELSIINCSKLKGRLP----QHFSSLERIVIMSCEQLLVSCTTLPLLCELEIDGFGEVA 258
LR+L I + LKG L + F LE ++I C L +S + L L L I + +VA
Sbjct: 790 LRKLDIWDFGSLKGLLKKEGEEQFPVLEEMIIHECPFLTLS-SNLRALTSLRI-CYNKVA 847
Query: 259 WINRPVEAGIFDSSNPGPEKSRTEVLPWEIGSPDQESLPEGLHKLSHITRISI-VGSYLV 317
+ P E ++ SR L + LP L L+ + + I + L
Sbjct: 848 -TSFPEEMFKNLANLKYLTISRCNNL---------KELPTSLASLNALKSLKIQLCCALE 897
Query: 318 SFPKGGLESLSFVRNLTSLERLELSRCPILKSFPENGL--LPSVVYLSIYLCPDLEEKCK 375
S P+ GLE LS SL L + C +LK PE GL L ++ L I CP L ++C+
Sbjct: 898 SLPEEGLEGLS------SLTELFVEHCNMLKCLPE-GLQHLTTLTSLKIRGCPQLIKRCE 950
Query: 376 KDEREYCHLVADIPFVQL 393
K E H ++ IP V +
Sbjct: 951 KGIGEDWHKISHIPNVNI 968
>sp|Q9LRR5|DRL21_ARATH Putative disease resistance protein At3g14460 OS=Arabidopsis
thaliana GN=At3g14460 PE=3 SV=1
Length = 1424
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 123/282 (43%), Gaps = 52/282 (18%)
Query: 8 LARLRRMETINGDFTEIFVIYLI-LVGDLTESKEMPLRIGKLTSLRTLTKFAVGKSNCSG 66
L+ R + ++ E+ + L+ LVG T EMP I KL SL+ L+ F +G+ + +G
Sbjct: 626 LSNCRDLTSLPKSIAELINLRLLDLVG--TPLVEMPPGIKKLRSLQKLSNFVIGRLSGAG 683
Query: 67 LSELRSSTLLHEKLTILGLENVNVAEDAKE-------------------GNRTTSSDSRE 107
L EL+ + L L I L+NV A +AK+ G+
Sbjct: 684 LHELKELSHLRGTLRISELQNVAFASEAKDAGLKRKPFLDGLILKWTVKGSGFVPGSFNA 743
Query: 108 VAEIQTRVLEMLKPHYGLKELKVQNYGGTKFPAWLGQSSFENLVVLRFRNCNQCTSLPSV 167
+A Q VL ML+PH LK +++Y G FP WLG SSF + + +CN C SLP V
Sbjct: 744 LACDQKEVLRMLEPHPHLKTFCIESYQGGAFPKWLGDSSFFGITSVTLSSCNLCISLPPV 803
Query: 168 GHLPLLKNLVIKGMGRMAKAG---------TTGGDQQAAK-------------------- 198
G LP LK L I+ + K G + G Q+ +
Sbjct: 804 GQLPSLKYLSIEKFNILQKVGLDFFFGENNSRGVPFQSLQILKFYGMPRWDEWICPELED 863
Query: 199 -GFPCLRELSIINCSKLKGRLPQHFSSLERIVIMSCEQLLVS 239
FPCL++L I C L+ + P+ S + I C VS
Sbjct: 864 GIFPCLQKLIIQRCPSLRKKFPEGLPSSTEVTISDCPLRAVS 905
>sp|Q8YA32|INLI_LISMO Internalin-I OS=Listeria monocytogenes serovar 1/2a (strain ATCC
BAA-679 / EGD-e) GN=inlI PE=4 SV=1
Length = 1778
Score = 43.5 bits (101), Expect = 0.003, Method: Composition-based stats.
Identities = 82/333 (24%), Positives = 135/333 (40%), Gaps = 57/333 (17%)
Query: 45 IGKLTSLRTLTKFAVGKSNCSGLSELRS-----STLLHEKLTILGLENVNVAEDAKEGNR 99
I L L LT + ++N S L+ L+ S L T++ L V + +E N
Sbjct: 175 IEGLQYLENLTSLNLSENNISDLAPLKDLVNLVSLNLSSNRTLVNLSGVEDLVNLQELNV 234
Query: 100 TTSSDSREVAEIQTRVL--EMLKPHYGLKELKVQNYGGTKFPAWLGQSSFENLVVLRFRN 157
+ + +++++ + + E+ +K L+++N G P E +
Sbjct: 235 SANKALEDISQVASLPVLKEISAQGCNIKTLELKNPAGAVLP------ELETFYLQE--- 285
Query: 158 CNQCTSLPSVGHLPLLKNLVIKGMGRMAKAGTTGGDQQAAKGFPCLRELSIINCSKLK-- 215
N T+L S+ LP LKNL IKG + T G + L+ + NC+ L+
Sbjct: 286 -NDLTNLTSLAKLPKLKNLYIKGNASLKSLETLNGATK-------LQLIDASNCTDLETL 337
Query: 216 GRLPQHFSSLERIVIMSCEQL--LVSCTTLPLLCELEIDGFGEVAWINRPVEAGIFD--S 271
G + S LE I + C +L + S LP L + D I D +
Sbjct: 338 GDI-SGLSELEMIQLSGCSKLKEITSLKNLPNLVNITAD------------SCAIEDLGT 384
Query: 272 SNPGPEKSRTEVLPWEIGSPDQESLPEGLHKLSHITRISIVGSYLVSFPKGGLESLSFVR 331
N P K +T VL S E L ++ IT + + + ++ G+ S+ +
Sbjct: 385 LNNLP-KLQTLVL----------SDNENLTNITAITDLPQLKT--LTLDGCGITSIGTLD 431
Query: 332 NLTSLERLELSRCPILKSFPENGLLPSVVYLSI 364
NL LE+L+L I S E LP + YL +
Sbjct: 432 NLPKLEKLDLKENQI-TSISEITDLPRLSYLDV 463
>sp|Q723X5|INLI_LISMF Internalin-I OS=Listeria monocytogenes serotype 4b (strain F2365)
GN=inlI PE=3 SV=1
Length = 1775
Score = 39.7 bits (91), Expect = 0.037, Method: Composition-based stats.
Identities = 54/219 (24%), Positives = 88/219 (40%), Gaps = 29/219 (13%)
Query: 45 IGKLTSLRTLTKFAVGKSNCSGLSELRS-----STLLHEKLTILGLENVNVAEDAKEGNR 99
I L L LT + ++N S L+ ++ S L T++ L V + +E N
Sbjct: 172 IEGLQYLENLTSLNLSENNISDLAPIKDLVNLVSLNLSSNRTLVNLSGVEGLVNLQELNV 231
Query: 100 TTSSDSREVAEIQTRVL--EMLKPHYGLKELKVQNYGGTKFPAWLGQSSFENLVVLRFRN 157
+ + +++++ + E+ +K L++ N G P E +
Sbjct: 232 SANKALEDISQVAALPVLKEISAQGCNIKTLELDNPAGAILP------ELETFYLQE--- 282
Query: 158 CNQCTSLPSVGHLPLLKNLVIKGMGRMAKAGTTGGDQQAAKGFPCLRELSIINCSKLK-- 215
N T L S+ LP LKNL IKG + T KG L+ + NC+ L+
Sbjct: 283 -NDLTDLTSLAKLPKLKNLYIKGNASLKSLATL-------KGATKLQLIDASNCTDLETL 334
Query: 216 GRLPQHFSSLERIVIMSCEQL--LVSCTTLPLLCELEID 252
G + S LE I + C +L + S LP L + D
Sbjct: 335 GDI-SGLSELEMIQLSGCSKLKEITSLKDLPNLVNITAD 372
>sp|P0CB16|DRL25_ARATH Putative disease resistance protein At4g19050 OS=Arabidopsis
thaliana GN=At4g19050 PE=3 SV=2
Length = 1201
Score = 37.7 bits (86), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 96/248 (38%), Gaps = 47/248 (18%)
Query: 126 KELKVQNYGGTKFPAWLGQ-SSFENLVVLRFRNCNQCTSLPSVGHLPLLKNLVIKGMGRM 184
KEL++ + T P + NL L RNC+ LPS+ L L+ + G ++
Sbjct: 679 KELRILDMSKTSLPELADTIADVVNLNKLLLRNCSLIEELPSIEKLTHLEVFDVSGCIKL 738
Query: 185 AKAGTTGGDQQAAKGFPCLRELSIINCSKLKGRLPQHFSSLERIVIMSCEQLLVSCTTLP 244
+ G+ LS N S+L ++ + S+L+ ++I C +L TLP
Sbjct: 739 KNINGSFGEMSYLHEV----NLSETNLSELPDKISE-LSNLKELIIRKCSKL----KTLP 789
Query: 245 LLCELEIDGFGEVAWINRPVEAGIFDSSNPGPEKSRTEVLPWEIGSPDQESLPEGLHKLS 304
L +L IFD S G + E++ LS
Sbjct: 790 NLEKL--------------TNLEIFDVS----------------GCTELETIEGSFENLS 819
Query: 305 HITRISIVGSYLVSFPKGGLESLSFVRNLTSLERLELSRCPILKSFPENGLLPSVVYLSI 364
+ ++++ + L P + L++L+ L L C LK+ P L +V +
Sbjct: 820 CLHKVNLSETNLGELPNK-------ISELSNLKELILRNCSKLKALPNLEKLTHLVIFDV 872
Query: 365 YLCPDLEE 372
C +L++
Sbjct: 873 SGCTNLDK 880
>sp|C0LGU1|Y5374_ARATH Probable LRR receptor-like serine/threonine-protein kinase
At5g37450 OS=Arabidopsis thaliana GN=At5g37450 PE=2 SV=1
Length = 959
Score = 37.7 bits (86), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 86/201 (42%), Gaps = 35/201 (17%)
Query: 29 LILVGDLTE-SKEMPLRIGKLTSLRTLTKFAVGKSNCSGLSELRSSTLLHEKLTILGLEN 87
LIL D E S ++P L +L+ L F + ++ +G STL
Sbjct: 152 LILQIDYNEISGKLPT---SLANLKKLKHFHMNNNSITGQIPPEYSTL------------ 196
Query: 88 VNVAEDAKEGNRTTSSDSREVAEIQTRVLEMLKPHYGLKELKVQNYGGTKFPAWLGQSSF 147
NV + N+ T + E+A++ P + +L N+ GT+ P+ G S
Sbjct: 197 TNVLHFLMDNNKLTGNLPPELAQM---------PSLRILQLDGSNFDGTEIPSSYG--SI 245
Query: 148 ENLVVLRFRNCNQCTSLPSVGHLPLLKNLVIKGMGRMAKAGTTGGDQQAAKGFPCLRELS 207
NLV L RNCN +P L K+LV+ + + T G+ K + ++
Sbjct: 246 PNLVKLSLRNCNLEGPIPD-----LSKSLVLYYLDISSNKLT--GEIPKNKFSANITTIN 298
Query: 208 IINCSKLKGRLPQHFSSLERI 228
+ N + L G +P +FS L R+
Sbjct: 299 LYN-NLLSGSIPSNFSGLPRL 318
>sp|Q9RBS2|POPC_RALSO Protein PopC OS=Ralstonia solanacearum (strain GMI1000) GN=popC
PE=4 SV=2
Length = 1024
Score = 37.0 bits (84), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 88/223 (39%), Gaps = 42/223 (18%)
Query: 36 TESKEMPLRIGKLTSLRTLTKFAVGKSNCSGLSELRSSTLLHEKLTILGLENVNVAEDAK 95
T+ +E+P G L +L+TL+ L+ L SS L L L+N +V+E
Sbjct: 507 TQLRELPANTGNLHALKTLS-----LQGNQQLATLPSSLGYLSGLEELTLKNSSVSE--- 558
Query: 96 EGNRTTSSDSREVAEIQTRVLEMLKPHYGLKELKVQNYGGTKFPAWLGQSSFENLVVLRF 155
L + P LK L V+N T PA +G E L L
Sbjct: 559 --------------------LPPMGPGSALKTLTVENSPLTSIPADIG-IQCERLTQLSL 597
Query: 156 RNCNQCTSLP-SVGHLPLLKNLVIKGMGRMAKAGTTGGDQQAAKGFPCLRELSIINCSKL 214
N Q +LP S+G L LK L +K R+ +G + +R++ + C +L
Sbjct: 598 SNT-QLRALPSSIGKLSNLKGLTLKNNARLELLSESG-----VRKLESVRKIDLSGCVRL 651
Query: 215 KGRLPQHFSSLERIVIMS---CEQLLVSCTTLPLLCELEIDGF 254
G LP L ++ + C L S +LP L DG
Sbjct: 652 TG-LPSSIGKLPKLRTLDLSGCTGL--SMASLPRSLVLPRDGL 691
>sp|A8G7F8|DAPA_PROM2 4-hydroxy-tetrahydrodipicolinate synthase OS=Prochlorococcus
marinus (strain MIT 9215) GN=dapA PE=3 SV=1
Length = 301
Score = 36.6 bits (83), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 30/48 (62%)
Query: 262 RPVEAGIFDSSNPGPEKSRTEVLPWEIGSPDQESLPEGLHKLSHITRI 309
+P+ G+F+++NP P K+ E+L W++GSP P + ++++I
Sbjct: 248 QPLFKGLFETTNPIPVKAALELLGWKVGSPRNPLTPLNKEQKENLSKI 295
>sp|B4LXW1|SUR8_DROVI Leucine-rich repeat protein soc-2 homolog OS=Drosophila virilis
GN=Sur-8 PE=3 SV=1
Length = 614
Score = 36.2 bits (82), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 19/104 (18%)
Query: 277 EKSRTEVLPWEIG-----------SPDQESLPEGLHKLSHITRISIVGSYLVSFPKGGLE 325
E++R EVLP EIG + LP + LS++T +S+ + L P+
Sbjct: 489 EENRIEVLPHEIGLLHELQRLILQTNQITMLPRSIGHLSNLTHLSVSENNLQFLPEE--- 545
Query: 326 SLSFVRNLTSLERLELSRCPILKSFP-ENGLLPSVVYLSIYLCP 368
+ +L SLE L +++ P L+ P E L ++ YL+I CP
Sbjct: 546 ----IGSLESLENLYINQNPGLEKLPFELALCQNLKYLNIDKCP 585
>sp|B4N9T4|SUR8_DROWI Leucine-rich repeat protein soc-2 homolog OS=Drosophila willistoni
GN=Sur-8 PE=3 SV=1
Length = 641
Score = 36.2 bits (82), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 19/104 (18%)
Query: 277 EKSRTEVLPWEIG-----------SPDQESLPEGLHKLSHITRISIVGSYLVSFPKGGLE 325
E++R EVLP EIG + LP + LS +T +S+ + L P+
Sbjct: 516 EENRIEVLPHEIGLLHELQRLILQTNQITMLPRSIGHLSQLTHLSVSENNLQFLPEE--- 572
Query: 326 SLSFVRNLTSLERLELSRCPILKSFP-ENGLLPSVVYLSIYLCP 368
+ +L SLE L +++ P L+ P E L ++ YL+I CP
Sbjct: 573 ----IGSLESLENLYINQNPGLEKLPFELALCQNLKYLNIDKCP 612
>sp|B4JTV9|SUR8_DROGR Leucine-rich repeat protein soc-2 homolog OS=Drosophila grimshawi
GN=Sur-8 PE=3 SV=1
Length = 622
Score = 35.8 bits (81), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 19/104 (18%)
Query: 277 EKSRTEVLPWEIG-----------SPDQESLPEGLHKLSHITRISIVGSYLVSFPKGGLE 325
E++R EVLP EIG + LP + LS++T +S+ + L P+
Sbjct: 497 EENRIEVLPHEIGLLHELQRLILQTNQITMLPRSVGHLSNLTHLSVSENNLQFLPEE--- 553
Query: 326 SLSFVRNLTSLERLELSRCPILKSFP-ENGLLPSVVYLSIYLCP 368
+ +L SLE L +++ P L+ P E L ++ YL+I CP
Sbjct: 554 ----IGSLESLENLYINQNPGLEKLPFELALCQNLKYLNIDKCP 593
>sp|Q9LFG1|Y3359_ARATH Putative leucine-rich repeat receptor-like serine/threonine-protein
kinase At3g53590 OS=Arabidopsis thaliana GN=At3g53590
PE=3 SV=2
Length = 937
Score = 35.4 bits (80), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 84/201 (41%), Gaps = 31/201 (15%)
Query: 47 KLTSLRTLTKFAVGKSNCSG-----LSELRSSTLLH-EKLTILGLENVNVAEDAK----- 95
+L +L+ L + V ++N +G LRS LH TI G V +++ K
Sbjct: 146 ELGNLQNLNRLQVDENNITGSVPFSFGNLRSIKHLHLNNNTISGEIPVELSKLPKLVHMI 205
Query: 96 -EGNRTTSSDSREVAEIQTRVLEMLKPHYGLKELKVQNYGGTKFPAWLGQSSFENLVVLR 154
+ N T + E+A++ P + +L N+ G+ P G F LV L
Sbjct: 206 LDNNNLTGTLPLELAQL---------PSLTILQLDNNNFEGSTIPEAYGH--FSRLVKLS 254
Query: 155 FRNCNQCTSLPSVGHLPLLKNLVIKGMGRMAKAGTTGGDQQAAKGFPCLRELSIINCSKL 214
RNC S+P + ++NL + GT + + + + ELS + L
Sbjct: 255 LRNCGLQGSIPDLSR---IENLSYLDLSWNHLTGTI-PESKLSDNMTTI-ELSY---NHL 306
Query: 215 KGRLPQHFSSLERIVIMSCEQ 235
G +PQ FS L + ++S E
Sbjct: 307 TGSIPQSFSDLNSLQLLSLEN 327
>sp|B4IBI9|SUR8_DROSE Leucine-rich repeat protein soc-2 homolog OS=Drosophila sechellia
GN=Sur-8 PE=3 SV=1
Length = 683
Score = 34.7 bits (78), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 19/104 (18%)
Query: 277 EKSRTEVLPWEIG-----------SPDQESLPEGLHKLSHITRISIVGSYLVSFPKGGLE 325
E++R EVLP EIG + LP + L ++T +S+ + L P+
Sbjct: 519 EENRIEVLPHEIGLLHELQRLILQTNQITMLPRSIGHLGNLTHLSVSENNLQFLPEE--- 575
Query: 326 SLSFVRNLTSLERLELSRCPILKSFP-ENGLLPSVVYLSIYLCP 368
+ +L SLE L +++ P L+ P E L ++ YL+I CP
Sbjct: 576 ----IGSLESLENLYINQNPGLEKLPFELALCQNLKYLNIDKCP 615
>sp|B4QVR7|SUR8_DROSI Leucine-rich repeat protein soc-2 homolog OS=Drosophila simulans
GN=Sur-8 PE=3 SV=2
Length = 680
Score = 34.7 bits (78), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 19/104 (18%)
Query: 277 EKSRTEVLPWEIG-----------SPDQESLPEGLHKLSHITRISIVGSYLVSFPKGGLE 325
E++R EVLP EIG + LP + L ++T +S+ + L P+
Sbjct: 516 EENRIEVLPHEIGLLHELQRLILQTNQITMLPRSIGHLGNLTHLSVSENNLQFLPEE--- 572
Query: 326 SLSFVRNLTSLERLELSRCPILKSFP-ENGLLPSVVYLSIYLCP 368
+ +L SLE L +++ P L+ P E L ++ YL+I CP
Sbjct: 573 ----IGSLESLENLYINQNPGLEKLPFELALCQNLKYLNIDKCP 612
>sp|B3P3E8|SUR8_DROER Leucine-rich repeat protein soc-2 homolog OS=Drosophila erecta
GN=Sur-8 PE=3 SV=1
Length = 644
Score = 34.7 bits (78), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 19/104 (18%)
Query: 277 EKSRTEVLPWEIG-----------SPDQESLPEGLHKLSHITRISIVGSYLVSFPKGGLE 325
E++R EVLP EIG + LP + L ++T +S+ + L P+
Sbjct: 519 EENRIEVLPHEIGLLHELQRLILQTNQITMLPRSIGHLGNLTHLSVSENNLQFLPEE--- 575
Query: 326 SLSFVRNLTSLERLELSRCPILKSFP-ENGLLPSVVYLSIYLCP 368
+ +L SLE L +++ P L+ P E L ++ YL+I CP
Sbjct: 576 ----IGSLESLENLYINQNPGLEKLPFELALCQNLKYLNIDKCP 615
>sp|B4PU77|SUR8_DROYA Leucine-rich repeat protein soc-2 homolog OS=Drosophila yakuba
GN=Sur-8 PE=3 SV=1
Length = 645
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 19/104 (18%)
Query: 277 EKSRTEVLPWEIG-----------SPDQESLPEGLHKLSHITRISIVGSYLVSFPKGGLE 325
E++R EVLP EIG + LP + L ++T +S+ + L P+
Sbjct: 520 EENRIEVLPHEIGLLHELQRLILQTNQITMLPRSIGHLGNLTHLSVSENNLQFLPEE--- 576
Query: 326 SLSFVRNLTSLERLELSRCPILKSFP-ENGLLPSVVYLSIYLCP 368
+ +L SLE L +++ P L+ P E L ++ YL+I CP
Sbjct: 577 ----IGSLESLENLYINQNPGLEKLPFELALCQNLKYLNIDKCP 616
>sp|B5DX45|SUR8_DROPS Leucine-rich repeat protein soc-2 homolog OS=Drosophila
pseudoobscura pseudoobscura GN=Sur-8 PE=3 SV=1
Length = 629
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 19/104 (18%)
Query: 277 EKSRTEVLPWEIG-----------SPDQESLPEGLHKLSHITRISIVGSYLVSFPKGGLE 325
E++R EVLP EIG + LP + LS++T +S+ + L P+
Sbjct: 504 EENRIEVLPHEIGLLHELQRLILQTNQITMLPRSIGHLSNLTHLSVSENNLQFLPEE--- 560
Query: 326 SLSFVRNLTSLERLELSRCPILKSFP-ENGLLPSVVYLSIYLCP 368
+ +L LE L +++ P L+ P E L ++ YL+I CP
Sbjct: 561 ----IGSLEGLENLYINQNPGLEKLPFELALCQNLKYLNIDKCP 600
>sp|Q9VEK6|SUR8_DROME Leucine-rich repeat protein soc-2 homolog OS=Drosophila
melanogaster GN=Sur-8 PE=2 SV=3
Length = 641
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 19/104 (18%)
Query: 277 EKSRTEVLPWEIG-----------SPDQESLPEGLHKLSHITRISIVGSYLVSFPKGGLE 325
E++R EVLP EIG + LP + L ++T +S+ + L P+
Sbjct: 516 EENRIEVLPHEIGLLHELQRLILQTNQITMLPRSIGHLGNLTHLSVSENNLQFLPEE--- 572
Query: 326 SLSFVRNLTSLERLELSRCPILKSFP-ENGLLPSVVYLSIYLCP 368
+ +L SLE L +++ P L+ P E L ++ YL+I CP
Sbjct: 573 ----IGSLESLENLYINQNPGLEKLPFELALCQNLKYLNIDKCP 612
>sp|O23530|SNC1_ARATH Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1 OS=Arabidopsis
thaliana GN=SNC1 PE=1 SV=3
Length = 1301
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 328 SFVRNLTSLERLELSRCPILKSFPENGLLPSVVYLSIYLCPDL 370
S ++N T L L++S C L+SFP + L S+ YL++ CP+L
Sbjct: 654 SSIQNATKLIYLDMSDCKKLESFPTDLNLESLEYLNLTGCPNL 696
>sp|Q0I127|RLMD_HAES1 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD OS=Haemophilus
somnus (strain 129Pt) GN=rlmD PE=3 SV=1
Length = 439
Score = 33.5 bits (75), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Query: 376 KDEREYCHLVADIPFVQLNHK--LVFDPREF 404
+DE+E CHL D+P+ QL+ L FD R+F
Sbjct: 239 QDEKEICHLQGDLPYYQLDDGSILHFDIRDF 269
>sp|P26337|ESA8C_TRYEQ Putative adenylate cyclase regulatory protein OS=Trypanosoma
equiperdum GN=ESAG8C PE=2 SV=1
Length = 630
Score = 32.3 bits (72), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 106/268 (39%), Gaps = 45/268 (16%)
Query: 150 LVVLRFRNCNQCTSLPSVGHLPLLKNLVIKGMGRMAKA-------------GTTG----G 192
L VLR+ +C++ T L ++G + L+ L + G + K +G G
Sbjct: 256 LKVLRYSSCHEITDLTAIGGMRSLEKLSLSGCWNVTKGLEELCKFSNLRELDISGCLVLG 315
Query: 193 DQQAAKGFPCLRELSIINCSKLKG-RLPQHFSSLERIVIMSCEQL--LVSCTTLPLLCEL 249
K L+ LS+ NC K + +L+++ + C + L L L EL
Sbjct: 316 SAVVLKNLINLKVLSVSNCKNFKDLNGLERLVNLDKLNLSGCHGVSSLGFVANLSNLKEL 375
Query: 250 EI---------DGFGEVAWINRPVEAGIFDSSNPGPEKSRTEVLPWEIGSPDQESLPEGL 300
+I DG ++ + + +N G K+ +++ ++ ++ + GL
Sbjct: 376 DISGCESLVCFDGLQDLNNLEVLYLRDVKSFTNVGAIKNLSKMRELDLSGCERITSLSGL 435
Query: 301 HKLSHITRISIVG-SYLVSFPK---------------GGLESLSFVRNLTSLERLELSRC 344
L + +S+ G ++SF G LE LS + +T LE L L C
Sbjct: 436 ETLKGLEELSLEGCGEIMSFDPIWSLHHLRVLYVSECGNLEDLSGLEGITGLEELYLHGC 495
Query: 345 PILKSFPENGLLPSVVYLSIYLCPDLEE 372
+F L +V + + C +LE+
Sbjct: 496 RKCTNFGPIWNLRNVCVVELSCCENLED 523
>sp|Q40392|TMVRN_NICGU TMV resistance protein N OS=Nicotiana glutinosa GN=N PE=1 SV=1
Length = 1144
Score = 32.0 bits (71), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 27/43 (62%)
Query: 330 VRNLTSLERLELSRCPILKSFPENGLLPSVVYLSIYLCPDLEE 372
++L SL R++LS L P+ +P++ Y+++Y C +LEE
Sbjct: 615 TKHLPSLRRIDLSWSKRLTRTPDFTGMPNLEYVNLYQCSNLEE 657
>sp|A2BZ39|DAPA_PROM5 4-hydroxy-tetrahydrodipicolinate synthase OS=Prochlorococcus
marinus (strain MIT 9515) GN=dapA PE=3 SV=1
Length = 302
Score = 32.0 bits (71), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 22/36 (61%)
Query: 262 RPVEAGIFDSSNPGPEKSRTEVLPWEIGSPDQESLP 297
+P+ +F+++NP P K+ E+ W++GSP P
Sbjct: 249 QPLFKALFETTNPIPIKAALELTGWQVGSPRNPLTP 284
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.137 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 148,615,437
Number of Sequences: 539616
Number of extensions: 6267270
Number of successful extensions: 12887
Number of sequences better than 100.0: 41
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 12785
Number of HSP's gapped (non-prelim): 114
length of query: 405
length of database: 191,569,459
effective HSP length: 120
effective length of query: 285
effective length of database: 126,815,539
effective search space: 36142428615
effective search space used: 36142428615
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)