BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044607
(110 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Query: 25 KNFFNSMDTNGDGRISRSEFLQFLGKFNNTQW----IQELFQSIDQNGDGSLDFVEFL 78
++ F DTNGDG IS SE + + K Q I+E+ + +D NGDG +DF EF+
Sbjct: 10 RDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFV 67
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 47.0 bits (110), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Query: 25 KNFFNSMDTNGDGRISRSEFLQFLGKFNNTQW----IQELFQSIDQNGDGSLDFVEFL 78
++ F DTNGDG IS SE + + K Q I+E+ + +D NGDG +DF EF+
Sbjct: 105 RDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFV 162
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Query: 25 KNFFNSMDTNGDGRISRSEFLQFLGKFNNTQW----IQELFQSIDQNGDGSLDFVEFL 78
++ F DTNGDG IS SE + + K Q I+E+ + +D NGDG +DF EF+
Sbjct: 91 RDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFV 148
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Query: 23 LAKNFFNSMDTNGDGRISRSEFLQFLGK---FNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
+A+ F +D NGDG +S E F+ K N Q +Q +F+SID +G+G +D EF
Sbjct: 1 MAEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAK 60
Query: 80 PFYFVSNWRVKCDGLGCNTW 99
+ + + D +G
Sbjct: 61 FYGSIQGQDLSDDKIGLKVL 80
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 25 KNFFNSMDTNGDGRISRSEFLQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
K + MD +GDG++++ E F K + + + E D NGDG + EFL
Sbjct: 78 KVLYKLMDVDGDGKLTKEEVTSFFKK-HGIEKVAEQVMKADANGDGYITLEEFL 130
Score = 32.7 bits (73), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 21 QNLAKNFFNSMDTNGDGRISRSEFLQFLGKF------NNTQWIQELFQSIDQNGDGSLDF 74
+ L + F S+D +G+G I ++EF +F G ++ ++ L++ +D +GDG L
Sbjct: 35 EQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLYKLMDVDGDGKL-T 93
Query: 75 VEFLTPFY 82
E +T F+
Sbjct: 94 KEEVTSFF 101
Score = 25.4 bits (54), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Query: 20 VQNLAKNFFNSMDTNGDGRISRSEFLQF 47
++ +A+ + D NGDG I+ EFL+F
Sbjct: 106 IEKVAEQVMKA-DANGDGYITLEEFLEF 132
>pdb|3LI6|A Chain A, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|D Chain D, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|G Chain G, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|J Chain J, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
Length = 66
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
Query: 23 LAKNFFNSMDTNGDGRISRSEFLQFLGK---FNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
+A+ F +D NGDG +S E F+ K N Q +Q +F+SID +G+G +D EF
Sbjct: 1 MAEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEF-A 59
Query: 80 PFY 82
FY
Sbjct: 60 KFY 62
Score = 26.9 bits (58), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 21 QNLAKNFFNSMDTNGDGRISRSEFLQFLG 49
+ L + F S+D +G+G I ++EF +F G
Sbjct: 35 EQLLQLIFKSIDADGNGEIDQNEFAKFYG 63
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Query: 25 KNFFNSMDTNGDGRISRSEFLQ----FLGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
++ F DTNGDG IS SE + LG + I+E+ + +D NGDG +DF EF+
Sbjct: 91 RDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFV 148
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium
Bound Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 24 AKNFFNSMDTNGDGRISRSEFLQFLGK---FNNTQWIQELFQSIDQNGDGSLDFVEFLTP 80
A+ F +D NGDG +S E F+ K N Q +Q +F+SID +G+G +D EF
Sbjct: 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61
Query: 81 FYFVSNWRVKCDGLGCNTW 99
+ + + D +G
Sbjct: 62 YGSIQGQDLSDDKIGLKVL 80
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 25 KNFFNSMDTNGDGRISRSEFLQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
K + MD +GDG++++ E F K + + + E D NGDG + EFL
Sbjct: 78 KVLYKLMDVDGDGKLTKEEVTSFFKK-HGIEKVAEQVMKADANGDGYITLEEFL 130
Score = 32.7 bits (73), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 21 QNLAKNFFNSMDTNGDGRISRSEFLQFLGKF------NNTQWIQELFQSIDQNGDGSLDF 74
+ L + F S+D +G+G I ++EF +F G ++ ++ L++ +D +GDG L
Sbjct: 35 EQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLYKLMDVDGDGKL-T 93
Query: 75 VEFLTPFY 82
E +T F+
Sbjct: 94 KEEVTSFF 101
Score = 25.4 bits (54), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Query: 20 VQNLAKNFFNSMDTNGDGRISRSEFLQF 47
++ +A+ + D NGDG I+ EFL+F
Sbjct: 106 IEKVAEQVMKA-DANGDGYITLEEFLEF 132
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 45.1 bits (105), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 23 LAKNFFNSMDTNGDGRISRSEFLQFLG---KFNNTQWIQELFQSIDQNGDGSLDFVEF 77
+A+ F +D NGDG +S E F+ N Q +Q +F++ID +G+G +D EF
Sbjct: 1 MAEALFKQLDANGDGSVSYEEVKAFVSSKRPIKNEQLLQLIFKAIDIDGNGEIDLAEF 58
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 25 KNFFNSMDTNGDGRISRSEFLQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K + MD +GDG++++ E F KF + + ++ ++ D NGDG + EFL
Sbjct: 78 KILYKLMDADGDGKLTKEEVTTFFKKFGYEKVVDQIMKA-DANGDGYITLEEFLA 131
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 6/67 (8%)
Query: 21 QNLAKNFFNSMDTNGDGRISRSEFLQFLGKFNNTQWIQE------LFQSIDQNGDGSLDF 74
+ L + F ++D +G+G I +EF +F E L++ +D +GDG L
Sbjct: 35 EQLLQLIFKAIDIDGNGEIDLAEFTKFAAAVKEQDLSDEKVGLKILYKLMDADGDGKLTK 94
Query: 75 VEFLTPF 81
E T F
Sbjct: 95 EEVTTFF 101
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 25 KNFFNSMDTNGDGRISRSEFLQFLGKFNNTQW--IQELFQSIDQNGDGSLDFVEFLT 79
+ F DTNGDG+IS SE L +T +Q + ID +GDG +DF EF++
Sbjct: 6 ERIFKRFDTNGDGKISLSELTDALRTLGSTSADEVQRMMAEIDTDGDGFIDFNEFIS 62
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 25 KNFFNSMDTNGDGRISRSEFLQFLGKFNNTQW--IQELFQSIDQNGDGSLDFVEFLT 79
+ F DTNGDG+IS SE L +T +Q + ID +GDG +DF EF++
Sbjct: 5 ERIFKRFDTNGDGKISLSELTDALRTLGSTSADEVQRMMAEIDTDGDGFIDFNEFIS 61
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 43.5 bits (101), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F+ D +GDG I+ E ++ LG+ +Q++ +D +GDG++DF EFLT
Sbjct: 313 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLT 370
Score = 33.9 bits (76), Expect = 0.021, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Query: 14 NNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGK----FNNTQWIQELFQSIDQNGD 69
N E+Q++ N +D +GDG I EFL + + ++ + I+E F+ D++G+
Sbjct: 342 NPTEAELQDM----INEVDADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGN 397
Query: 70 GSLDFVEF 77
G + E
Sbjct: 398 GYISAAEL 405
Score = 31.6 bits (70), Expect = 0.13, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 28 FNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
F D +G+G IS +E + LG+ + + E+ + D +GDG +++ EF+
Sbjct: 389 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 442
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 43.5 bits (101), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F+ D +GDG I+ E ++ LG+ +Q++ +D +GDG++DF EFLT
Sbjct: 313 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLT 370
Score = 33.9 bits (76), Expect = 0.021, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Query: 14 NNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGK----FNNTQWIQELFQSIDQNGD 69
N E+Q++ N +D +GDG I EFL + + ++ + I+E F+ D++G+
Sbjct: 342 NPTEAELQDM----INEVDADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGN 397
Query: 70 GSLDFVEF 77
G + E
Sbjct: 398 GYISAAEL 405
Score = 31.2 bits (69), Expect = 0.14, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 28 FNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
F D +G+G IS +E + LG+ + + E+ + D +GDG +++ EF+
Sbjct: 389 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 442
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 43.5 bits (101), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F+ D +GDG I+ E ++ LG+ +Q++ +D +GDG++DF EFLT
Sbjct: 314 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLT 371
Score = 33.9 bits (76), Expect = 0.021, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Query: 14 NNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGK----FNNTQWIQELFQSIDQNGD 69
N E+Q++ N +D +GDG I EFL + + ++ + I+E F+ D++G+
Sbjct: 343 NPTEAELQDM----INEVDADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGN 398
Query: 70 GSLDFVEF 77
G + E
Sbjct: 399 GYISAAEL 406
Score = 31.2 bits (69), Expect = 0.14, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 28 FNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
F D +G+G IS +E + LG+ + + E+ + D +GDG +++ EF+
Sbjct: 390 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 443
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 43.1 bits (100), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F+ D +GDG I+ E ++ LG+ +Q++ +D +GDG++DF EFLT
Sbjct: 313 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLT 370
Score = 33.9 bits (76), Expect = 0.022, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Query: 14 NNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGK----FNNTQWIQELFQSIDQNGD 69
N E+Q++ N +D +GDG I EFL + + ++ + I+E F+ D++G+
Sbjct: 342 NPTEAELQDM----INEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 397
Query: 70 GSLDFVEF 77
G + E
Sbjct: 398 GYISAAEL 405
Score = 31.2 bits (69), Expect = 0.14, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 28 FNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
F D +G+G IS +E + LG+ + + E+ + D +GDG +++ EF+
Sbjct: 389 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 442
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human
N60d Calmodulin Refined With Paramagnetism Based
Strategy
Length = 79
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F+ D +GDG I+ E ++ LG+ +Q++ +D +GDG++DF EFLT
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLT 70
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 42.4 bits (98), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F+ D +GDG I+ E ++ LG+ +Q++ +D +GDG++DF EFLT
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLT 70
Score = 32.7 bits (73), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Query: 11 ICYNNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGK----FNNTQWIQELFQSIDQ 66
+ N E+Q++ N +D +GDG I EFL + + ++ + I+E F+ D+
Sbjct: 39 LGQNPTEAELQDM----INEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDK 94
Query: 67 NGDGSLDFVEF 77
+G+G + E
Sbjct: 95 DGNGYISAAEL 105
Score = 30.0 bits (66), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEFLQF---LGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
+ F D +G+G IS +E LG+ + + E+ + D +GDG +++ EF+
Sbjct: 86 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 142
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 42.0 bits (97), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
K F+ D +GDG I+ E ++ LG+ +Q++ +D +GDG++DF EFL
Sbjct: 305 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFL 361
Score = 33.5 bits (75), Expect = 0.030, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Query: 14 NNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGK----FNNTQWIQELFQSIDQNGD 69
N E+Q++ N +D +GDG I EFL + + ++ + I+E F+ D++G+
Sbjct: 334 NPTEAELQDM----INEVDADGDGTIDFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGN 389
Query: 70 GSLDFVEF 77
G + E
Sbjct: 390 GYISAAEL 397
Score = 31.6 bits (70), Expect = 0.12, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 28 FNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
F D +G+G IS +E + LG+ + + E+ + D +GDG +++ EF+
Sbjct: 381 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 434
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 41.6 bits (96), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F+ D +GDG I+ E ++ LG+ +Q++ +D +G+G++DF EFLT
Sbjct: 314 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 371
Score = 32.3 bits (72), Expect = 0.077, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Query: 14 NNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGK----FNNTQWIQELFQSIDQNGD 69
N E+Q++ N +D +G+G I EFL + + ++ + I+E F+ D++G+
Sbjct: 343 NPTEAELQDM----INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 398
Query: 70 GSLDFVEF 77
G + E
Sbjct: 399 GYISAAEL 406
Score = 31.2 bits (69), Expect = 0.14, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 28 FNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
F D +G+G IS +E + LG+ + + E+ + D +GDG +++ EF+
Sbjct: 390 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 443
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 41.6 bits (96), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F+ D +GDG I+ E ++ LG+ +Q++ +D +G+G++DF EFLT
Sbjct: 315 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 372
Score = 32.3 bits (72), Expect = 0.077, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Query: 14 NNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGK----FNNTQWIQELFQSIDQNGD 69
N E+Q++ N +D +G+G I EFL + + ++ + I+E F+ D++G+
Sbjct: 344 NPTEAELQDM----INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 399
Query: 70 GSLDFVEF 77
G + E
Sbjct: 400 GYISAAEL 407
Score = 31.2 bits (69), Expect = 0.14, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 28 FNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
F D +G+G IS +E + LG+ + + E+ + D +GDG +++ EF+
Sbjct: 391 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 444
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 41.6 bits (96), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F+ D +GDG I+ E ++ LG+ +Q++ +D +G+G++DF EFLT
Sbjct: 314 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 371
Score = 32.3 bits (72), Expect = 0.077, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Query: 14 NNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGK----FNNTQWIQELFQSIDQNGD 69
N E+Q++ N +D +G+G I EFL + + ++ + I+E F+ D++G+
Sbjct: 343 NPTEAELQDM----INEVDADGNGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGN 398
Query: 70 GSLDFVEF 77
G + E
Sbjct: 399 GYISAAEL 406
Score = 31.2 bits (69), Expect = 0.14, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 28 FNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
F D +G+G IS +E + LG+ + + E+ + D +GDG +++ EF+
Sbjct: 390 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 443
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 41.6 bits (96), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F+ D +GDG I+ E ++ LG+ +Q++ +D +G+G++DF EFLT
Sbjct: 314 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 371
Score = 32.3 bits (72), Expect = 0.078, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Query: 14 NNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGK----FNNTQWIQELFQSIDQNGD 69
N E+Q++ N +D +G+G I EFL + + ++ + I+E F+ D++G+
Sbjct: 343 NPTEAELQDM----INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 398
Query: 70 GSLDFVEF 77
G + E
Sbjct: 399 GYISAAEL 406
Score = 31.2 bits (69), Expect = 0.14, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 28 FNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
F D +G+G IS +E + LG+ + + E+ + D +GDG +++ EF+
Sbjct: 390 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 443
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 41.6 bits (96), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F+ D +GDG I+ E ++ LG+ +Q++ +D +G+G++DF EFLT
Sbjct: 280 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 337
Score = 32.0 bits (71), Expect = 0.079, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Query: 14 NNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGK----FNNTQWIQELFQSIDQNGD 69
N E+Q++ N +D +G+G I EFL + + ++ + I+E F+ D++G+
Sbjct: 309 NPTEAELQDM----INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 364
Query: 70 GSLDFVEF 77
G + E
Sbjct: 365 GYISAAEL 372
Score = 31.2 bits (69), Expect = 0.14, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 28 FNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
F D +G+G IS +E + LG+ + + E+ + D +GDG +++ EF+
Sbjct: 356 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 409
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 41.6 bits (96), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F+ D +GDG I+ E ++ LG+ +Q++ +D +G+G++DF EFLT
Sbjct: 280 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 337
Score = 32.0 bits (71), Expect = 0.079, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Query: 14 NNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGK----FNNTQWIQELFQSIDQNGD 69
N E+Q++ N +D +G+G I EFL + + ++ + I+E F+ D++G+
Sbjct: 309 NPTEAELQDM----INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 364
Query: 70 GSLDFVEF 77
G + E
Sbjct: 365 GYISAAEL 372
Score = 31.2 bits (69), Expect = 0.14, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 28 FNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
F D +G+G IS +E + LG+ + + E+ + D +GDG +++ EF+
Sbjct: 356 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 409
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 41.2 bits (95), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F+ D +GDG I+ E ++ LG+ +Q++ +D +G+G++DF EFLT
Sbjct: 314 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 371
Score = 33.1 bits (74), Expect = 0.036, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
Query: 14 NNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGKF----NNTQWIQELFQSIDQNGD 69
N E+Q++ N +D +G+G I EFL + ++ ++ + I+E F+ D++G+
Sbjct: 343 NPTEAELQDM----INEVDADGNGTIDFPEFLTMMARWMKDTDSEEEIREAFRVFDKDGN 398
Query: 70 GSLDFVEF 77
G + E
Sbjct: 399 GYISAAEL 406
Score = 31.2 bits (69), Expect = 0.15, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 28 FNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
F D +G+G IS +E + LG+ + + E+ + D +GDG +++ EF+
Sbjct: 390 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 443
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 41.2 bits (95), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F+ D +GDG I+ E ++ LG+ +Q++ +D +G+G++DF EFLT
Sbjct: 277 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 334
Score = 32.0 bits (71), Expect = 0.092, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Query: 14 NNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGK----FNNTQWIQELFQSIDQNGD 69
N E+Q++ N +D +G+G I EFL + + ++ + I+E F+ D++G+
Sbjct: 306 NPTEAELQDM----INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 361
Query: 70 GSLDFVEF 77
G + E
Sbjct: 362 GYISAAEL 369
Score = 31.2 bits (69), Expect = 0.16, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 28 FNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
F D +G+G IS +E + LG+ + + E+ + D +GDG +++ EF+
Sbjct: 353 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 406
>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|B Chain B, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|C Chain C, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|D Chain D, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
Length = 189
Score = 40.4 bits (93), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 37 GRISRSEFLQFLGKF----NNTQWIQELFQSIDQNGDGSLDFVEFLTPFYFVS 85
GRI+R EF KF + + Q +F+S D N DG+LDF E++ + S
Sbjct: 41 GRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTS 93
>pdb|1JSA|A Chain A, Myristoylated Recoverin With Two Calciums Bound, Nmr, 24
Structures
Length = 201
Score = 40.4 bits (93), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 37 GRISRSEFLQFLGKF----NNTQWIQELFQSIDQNGDGSLDFVEFLTPFYFVS 85
GRI+R EF KF + + Q +F+S D N DG+LDF E++ + S
Sbjct: 41 GRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTS 93
>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With
Calcium Bound To Ef- Hand 3
pdb|1REC|A Chain A, Three-Dimensional Structure Of Recoverin, A Calcium
Sensor In Vision
pdb|1IKU|A Chain A, Myristoylated Recoverin In The Calcium-Free State, Nmr,
22 Structures
Length = 201
Score = 40.4 bits (93), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 37 GRISRSEFLQFLGKF----NNTQWIQELFQSIDQNGDGSLDFVEFLTPFYFVS 85
GRI+R EF KF + + Q +F+S D N DG+LDF E++ + S
Sbjct: 41 GRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTS 93
>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase
Length = 202
Score = 40.4 bits (93), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 37 GRISRSEFLQFLGKF----NNTQWIQELFQSIDQNGDGSLDFVEFLTPFYFVS 85
GRI+R EF KF + + Q +F+S D N DG+LDF E++ + S
Sbjct: 42 GRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTS 94
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A
Binding Motif (Nscate) Peptide From The N-Terminal
Cytoplasmic Domain Of The L-Type Voltage-Cated Calcium
Channel Alpha1c Subunit
Length = 77
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F+ D +GDG I+ E ++ LG+ +Q++ +D +G+G++DF EFLT
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
Length = 79
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F+ D +GDG I+ E ++ LG+ +Q++ +D +G+G++DF EFLT
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F+ D +GDG I+ E ++ LG+ +Q++ +D +G+G++DF EFLT
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin
Amino- Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F+ D +GDG I+ E ++ LG+ +Q++ +D +G+G++DF EFLT
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal
Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In
Calcium-Calmodulin: Solution Structure Of Halothane-Cam
N-Terminal Domain
Length = 76
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F+ D +GDG I+ E ++ LG+ +Q++ +D +G+G++DF EFLT
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe
Bound With Er Alpha Peptide
Length = 80
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F+ D +GDG I+ E ++ LG+ +Q++ +D +G+G++DF EFLT
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And Pyrophosphate
Length = 146
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F+ D +GDG I+ E ++ LG+ +Q++ +D +G+G++DF EFLT
Sbjct: 11 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 68
Score = 30.4 bits (67), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Query: 14 NNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGK----FNNTQWIQELFQSIDQNGD 69
N E+Q++ N +D +G+G I EFL + + ++ + I+E F+ D++G+
Sbjct: 40 NPTEAELQDM----INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 95
Query: 70 GSLDFVEF 77
G + E
Sbjct: 96 GYISAAEL 103
Score = 30.0 bits (66), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEFLQF---LGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
+ F D +G+G IS +E LG+ + + E+ + D +GDG +++ EF+
Sbjct: 84 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 140
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F+ D +GDG I+ E ++ LG+ +Q++ +D +G+G++DF EFLT
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Score = 30.4 bits (67), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Query: 11 ICYNNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGK----FNNTQWIQELFQSIDQ 66
+ N E+Q++ N +D +G+G I EFL + + ++ + I+E F+ D+
Sbjct: 40 LGQNPTEAELQDM----INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDK 95
Query: 67 NGDGSLDFVEF 77
+G+G + E
Sbjct: 96 DGNGYISAAEL 106
Score = 30.0 bits (66), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEFLQF---LGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
+ F D +G+G IS +E LG+ + + E+ + D +GDG +++ EF+
Sbjct: 87 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 143
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal
Domain
Length = 76
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F+ D +GDG I+ E ++ LG+ +Q++ +D +G+G++DF EFLT
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F+ D +GDG I+ E ++ LG+ +Q++ +D +G+G++DF EFLT
Sbjct: 19 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 76
Score = 30.4 bits (67), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Query: 11 ICYNNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGK----FNNTQWIQELFQSIDQ 66
+ N E+Q++ N +D +G+G I EFL + + ++ + I+E F+ D+
Sbjct: 45 LGQNPTEAELQDM----INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDK 100
Query: 67 NGDGSLDFVEF 77
+G+G + E
Sbjct: 101 DGNGYISAAEL 111
Score = 30.0 bits (66), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEFLQF---LGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
+ F D +G+G IS +E LG+ + + E+ + D +GDG +++ EF+
Sbjct: 92 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 148
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd),
1:2 Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
And 3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
And 3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
And 3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A
Bis-Indol Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled
(Sail) Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From
Dap Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The
Basis Of Diversity In Molecular Recognition, 30
Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA
RECEPTOR NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel
(Cav2.1) Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel
(Cav2.1) Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide
From Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1
In Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE
BINDING MODE
Length = 148
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F+ D +GDG I+ E ++ LG+ +Q++ +D +G+G++DF EFLT
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Score = 30.4 bits (67), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Query: 11 ICYNNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGK----FNNTQWIQELFQSIDQ 66
+ N E+Q++ N +D +G+G I EFL + + ++ + I+E F+ D+
Sbjct: 39 LGQNPTEAELQDM----INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDK 94
Query: 67 NGDGSLDFVEF 77
+G+G + E
Sbjct: 95 DGNGYISAAEL 105
Score = 30.0 bits (66), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEFLQF---LGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
+ F D +G+G IS +E LG+ + + E+ + D +GDG +++ EF+
Sbjct: 86 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 142
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F+ D +GDG I+ E ++ LG+ +Q++ +D +G+G++DF EFLT
Sbjct: 10 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 67
Score = 30.4 bits (67), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Query: 11 ICYNNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGK----FNNTQWIQELFQSIDQ 66
+ N E+Q++ N +D +G+G I EFL + + ++ + I+E F+ D+
Sbjct: 36 LGQNPTEAELQDM----INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDK 91
Query: 67 NGDGSLDFVEF 77
+G+G + E
Sbjct: 92 DGNGYISAAEL 102
Score = 30.0 bits (66), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEFLQF---LGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
+ F D +G+G IS +E LG+ + + E+ + D +GDG +++ EF+
Sbjct: 83 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 139
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F+ D +GDG I+ E ++ LG+ +Q++ +D +G+G++DF EFLT
Sbjct: 17 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 74
Score = 30.0 bits (66), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Query: 11 ICYNNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGK----FNNTQWIQELFQSIDQ 66
+ N E+Q++ N +D +G+G I EFL + + ++ + I+E F+ D+
Sbjct: 43 LGQNPTEAELQDM----INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDK 98
Query: 67 NGDGSLDFVEF 77
+G+G + E
Sbjct: 99 DGNGYISAAEL 109
Score = 30.0 bits (66), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEFLQF---LGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
+ F D +G+G IS +E LG+ + + E+ + D +GDG +++ EF+
Sbjct: 90 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 146
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide:
A New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide:
A New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide:
A New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide:
A New Way Of Making An Old Binding Mode
Length = 179
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F+ D +GDG I+ E ++ LG+ +Q++ +D +G+G++DF EFLT
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Score = 30.4 bits (67), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Query: 14 NNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGK----FNNTQWIQELFQSIDQNGD 69
N E+Q++ N +D +G+G I EFL + + ++ + I+E F+ D++G+
Sbjct: 43 NPTEAELQDM----INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 98
Query: 70 GSLDFVEF 77
G + E
Sbjct: 99 GYISAAEL 106
Score = 30.0 bits (66), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEFLQF---LGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
+ F D +G+G IS +E LG+ + + E+ + D +GDG +++ EF+
Sbjct: 87 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 143
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F+ D +GDG I+ E ++ LG+ +Q++ +D +G+G++DF EFLT
Sbjct: 9 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 66
Score = 30.4 bits (67), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Query: 11 ICYNNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGK----FNNTQWIQELFQSIDQ 66
+ N E+Q++ N +D +G+G I EFL + + ++ + I+E F+ D+
Sbjct: 35 LGQNPTEAELQDM----INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDK 90
Query: 67 NGDGSLDFVEF 77
+G+G + E
Sbjct: 91 DGNGYISAAEL 101
Score = 30.0 bits (66), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEFLQF---LGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
+ F D +G+G IS +E LG+ + + E+ + D +GDG +++ EF+
Sbjct: 82 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 138
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE
KINASE Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
And 2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
And 2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
And 2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal
Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal
Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A
Calcineurin Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A
Calcineurin Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium
Channel Splice Variant Complexed With
Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium
Channel Splice Variant Complexed With
Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel
Splice Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel
Splice Variant And Ebio-1
Length = 149
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F+ D +GDG I+ E ++ LG+ +Q++ +D +G+G++DF EFLT
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Score = 30.4 bits (67), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Query: 11 ICYNNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGK----FNNTQWIQELFQSIDQ 66
+ N E+Q++ N +D +G+G I EFL + + ++ + I+E F+ D+
Sbjct: 40 LGQNPTEAELQDM----INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDK 95
Query: 67 NGDGSLDFVEF 77
+G+G + E
Sbjct: 96 DGNGYISAAEL 106
Score = 30.0 bits (66), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEFLQF---LGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
+ F D +G+G IS +E LG+ + + E+ + D +GDG +++ EF+
Sbjct: 87 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 143
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F+ D +GDG I+ E ++ LG+ +Q++ +D +G+G++DF EFLT
Sbjct: 15 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 72
Score = 30.4 bits (67), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Query: 11 ICYNNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGK----FNNTQWIQELFQSIDQ 66
+ N E+Q++ N +D +G+G I EFL + + ++ + I+E F+ D+
Sbjct: 41 LGQNPTEAELQDM----INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDK 96
Query: 67 NGDGSLDFVEF 77
+G+G + E
Sbjct: 97 DGNGYISAAEL 107
Score = 30.0 bits (66), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEFLQF---LGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
+ F D +G+G IS +E LG+ + + E+ + D +GDG +++ EF+
Sbjct: 88 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 144
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In
The Crystal Structure
Length = 142
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F+ D +GDG I+ E ++ LG+ +Q++ +D +G+G++DF EFLT
Sbjct: 9 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 66
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 11 ICYNNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLG---KFNNTQWIQELFQSIDQN 67
+ N E+Q++ N +D +G+G I EFL + K +++ I+E F+ D++
Sbjct: 35 LGQNPTEAELQDM----INEVDADGNGTIDFPEFLTMMARKMKDTDSEEIREAFRVFDKD 90
Query: 68 GDGSLDFVEF 77
G+G + E
Sbjct: 91 GNGYISAAEL 100
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEFLQF---LGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
+ F D +G+G IS +E LG+ + + E+ + + +GDG +++ EF+
Sbjct: 81 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNYEEFV 137
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef)
Truncation Mutant, Ef-delta 64 In Complex With
Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef)
Truncation Mutant, Ef-delta 64 In Complex With
Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef)
Truncation Mutant, Ef-delta 64 In Complex With
Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef)
Truncation Mutant, Ef-delta 64 In Complex With
Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef)
Truncation Mutant, Ef-delta 64 In Complex With
Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef)
Truncation Mutant, Ef-delta 64 In Complex With
Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In
Complex With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In
Complex With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In
Complex With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In
Complex With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In
Complex With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In
Complex With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F+ D +GDG I+ E ++ LG+ +Q++ +D +G+G++DF EFLT
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Score = 30.4 bits (67), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Query: 11 ICYNNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGK----FNNTQWIQELFQSIDQ 66
+ N E+Q++ N +D +G+G I EFL + + ++ + I+E F+ D+
Sbjct: 40 LGQNPTEAELQDM----INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDK 95
Query: 67 NGDGSLDFVEF 77
+G+G + E
Sbjct: 96 DGNGYISAAEL 106
Score = 28.5 bits (62), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEFLQF---LGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
+ F D +G+G IS +E LG+ + + ++ + D +GDG +++ EF+
Sbjct: 87 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDQMIREADIDGDGQVNYEEFV 143
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F+ D +GDG I+ E ++ LG+ +Q++ +D +G+G++DF EFLT
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEFLQF---LGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
+ F D +G+G IS +E LG+ + + E+ + D +GDG +++ EF+T
Sbjct: 86 REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVT 143
Score = 29.6 bits (65), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Query: 11 ICYNNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGK----FNNTQWIQELFQSIDQ 66
+ N E+Q++ N +D +G+G I EFL + + ++ + I+E F+ D+
Sbjct: 39 LGQNPTEAELQDM----INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDK 94
Query: 67 NGDGSLDFVEF 77
+G+G + E
Sbjct: 95 DGNGFISAAEL 105
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F+ D +GDG I+ E ++ LG+ +Q++ +D +G+G++DF EFLT
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Score = 30.4 bits (67), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Query: 11 ICYNNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGK----FNNTQWIQELFQSIDQ 66
+ N E+Q++ N +D +G+G I EFL + + ++ + I+E F+ D+
Sbjct: 40 LGQNPTEAELQDM----INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDK 95
Query: 67 NGDGSLDFVEF 77
+G+G + E
Sbjct: 96 DGNGYISAAEL 106
Score = 30.0 bits (66), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEFLQF---LGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
+ F D +G+G IS +E LG+ + + E+ + D +GDG +++ EF+
Sbjct: 87 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 143
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F+ D +GDG I+ E ++ LG+ +Q++ +D +G+G++DF EFLT
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Score = 30.0 bits (66), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Query: 11 ICYNNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGK----FNNTQWIQELFQSIDQ 66
+ N E+Q++ N +D +G+G I EFL + + ++ + I+E F+ D+
Sbjct: 39 LGQNPTEAELQDM----INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDK 94
Query: 67 NGDGSLDFVEF 77
+G+G + E
Sbjct: 95 DGNGYISAAEL 105
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEFLQF---LGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
+ F D +G+G IS +E LG+ + + E+ + + +GDG +++ EF+
Sbjct: 86 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNYEEFV 142
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F+ D +GDG I+ E ++ LG+ +Q++ +D +G+G++DF EFLT
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F+ D +GDG I+ E ++ LG+ +Q++ +D +G+G++DF EFLT
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Score = 30.4 bits (67), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEFLQF---LGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
+ F D +G+G IS +E LG+ + + E+ + D +GDG +++ EF+
Sbjct: 87 REAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYEEFV 143
Score = 30.0 bits (66), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Query: 11 ICYNNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGK----FNNTQWIQELFQSIDQ 66
+ N E+Q++ N +D +G+G I EFL + + ++ + I+E F+ D+
Sbjct: 40 LGQNPTEAELQDM----INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDK 95
Query: 67 NGDGSLDFVEF 77
+G+G + E
Sbjct: 96 DGNGYISAAEL 106
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F+ D +GDG I+ E ++ LG+ +Q++ +D +G+G++DF EFLT
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Score = 30.4 bits (67), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEFLQF---LGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
+ F D +G+G IS +E LG+ + + E+ + D +GDG +++ EF+
Sbjct: 86 REAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYEEFV 142
Score = 30.0 bits (66), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Query: 11 ICYNNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGK----FNNTQWIQELFQSIDQ 66
+ N E+Q++ N +D +G+G I EFL + + ++ + I+E F+ D+
Sbjct: 39 LGQNPTEAELQDM----INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDK 94
Query: 67 NGDGSLDFVEF 77
+G+G + E
Sbjct: 95 DGNGYISAAEL 105
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F+ D +GDG I+ E ++ LG+ +Q++ +D +G+G++DF EFLT
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Score = 30.0 bits (66), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Query: 11 ICYNNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGK----FNNTQWIQELFQSIDQ 66
+ N E+Q++ N +D +G+G I EFL + + ++ + I+E F+ D+
Sbjct: 39 LGQNPTEAELQDM----INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDK 94
Query: 67 NGDGSLDFVEF 77
+G+G + E
Sbjct: 95 DGNGYISAAEL 105
Score = 30.0 bits (66), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEFLQF---LGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
+ F D +G+G IS +E LG+ + + E+ + D +GDG +++ EF+
Sbjct: 86 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 142
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F+ D +GDG I+ E ++ LG+ +Q++ +D +G+G++DF EFLT
Sbjct: 11 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 68
Score = 30.0 bits (66), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Query: 11 ICYNNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGK----FNNTQWIQELFQSIDQ 66
+ N E+Q++ N +D +G+G I EFL + + ++ + I+E F+ D+
Sbjct: 37 LGQNPTEAELQDM----INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDK 92
Query: 67 NGDGSLDFVEF 77
+G+G + E
Sbjct: 93 DGNGYISAAEL 103
Score = 30.0 bits (66), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEFLQF---LGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
+ F D +G+G IS +E LG+ + + E+ + D +GDG +++ EF+
Sbjct: 84 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 140
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX
COMPLEX
Length = 144
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F+ D +GDG I+ E ++ LG+ +Q++ +D +G+G++DF EFLT
Sbjct: 11 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 68
Score = 30.0 bits (66), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Query: 11 ICYNNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGK----FNNTQWIQELFQSIDQ 66
+ N E+Q++ N +D +G+G I EFL + + ++ + I+E F+ D+
Sbjct: 37 LGQNPTEAELQDM----INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDK 92
Query: 67 NGDGSLDFVEF 77
+G+G + E
Sbjct: 93 DGNGYISAAEL 103
Score = 30.0 bits (66), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEFLQF---LGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
+ F D +G+G IS +E LG+ + + E+ + D +GDG +++ EF+
Sbjct: 84 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 140
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide
Complex By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide
Complex By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F+ D +GDG I+ E ++ LG+ +Q++ +D +G+G++DF EFLT
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Score = 30.8 bits (68), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEFLQF---LGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
+ F D +G+G IS +E LG+ + + E+ + D +GDG +++ EF+T
Sbjct: 86 REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVT 143
Score = 29.6 bits (65), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Query: 11 ICYNNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGK----FNNTQWIQELFQSIDQ 66
+ N E+Q++ N +D +G+G I EFL + + ++ + I+E F+ D+
Sbjct: 39 LGQNPTEAELQDM----INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDK 94
Query: 67 NGDGSLDFVEF 77
+G+G + E
Sbjct: 95 DGNGFISAAEL 105
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor
State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant
Crystal Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1)
Post-rigor State
Length = 149
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F+ D +GDG I+ E ++ LG+ +Q++ +D +G+G++DF EFLT
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Score = 30.8 bits (68), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEFLQF---LGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
+ F D +G+G IS +E LG+ + + E+ + D +GDG +++ EF+T
Sbjct: 87 REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVT 144
Score = 29.6 bits (65), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Query: 11 ICYNNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGK----FNNTQWIQELFQSIDQ 66
+ N E+Q++ N +D +G+G I EFL + + ++ + I+E F+ D+
Sbjct: 40 LGQNPTEAELQDM----INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDK 95
Query: 67 NGDGSLDFVEF 77
+G+G + E
Sbjct: 96 DGNGFISAAEL 106
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans :
Calmodulin
Length = 149
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F+ D +GDG I+ E ++ LG+ +Q++ +D +G+G++DF EFLT
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Score = 30.8 bits (68), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEFLQF---LGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
+ F D +G+G IS +E LG+ + + E+ + D +GDG +++ EF+T
Sbjct: 87 REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVT 144
Score = 29.6 bits (65), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Query: 11 ICYNNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGK----FNNTQWIQELFQSIDQ 66
+ N E+Q++ N +D +G+G I EFL + + ++ + I+E F+ D+
Sbjct: 40 LGQNPTEAELQDM----INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDK 95
Query: 67 NGDGSLDFVEF 77
+G+G + E
Sbjct: 96 DGNGFISAAEL 106
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional
Myosin V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional
Myosin V
Length = 145
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F+ D +GDG I+ E ++ LG+ +Q++ +D +G+G++DF EFLT
Sbjct: 12 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 69
Score = 30.0 bits (66), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Query: 11 ICYNNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGK----FNNTQWIQELFQSIDQ 66
+ N E+Q++ N +D +G+G I EFL + + ++ + I+E F+ D+
Sbjct: 38 LGQNPTEAELQDM----INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDK 93
Query: 67 NGDGSLDFVEF 77
+G+G + E
Sbjct: 94 DGNGYISAAEL 104
Score = 30.0 bits (66), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEFLQF---LGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
+ F D +G+G IS +E LG+ + + E+ + D +GDG +++ EF+
Sbjct: 85 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 141
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F+ D +GDG I+ E ++ LG+ +Q++ +D +G+G++DF EFLT
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Score = 30.8 bits (68), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEFLQF---LGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
+ F D +G+G IS +E LG+ + + E+ + D +GDG +++ EF+T
Sbjct: 84 REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVT 141
Score = 30.0 bits (66), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Query: 11 ICYNNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGK--FNNTQWIQELFQSIDQNG 68
+ N E+Q++ N +D +G+G I EFL + + ++ + I+E F+ D++G
Sbjct: 39 LGQNPTEAELQDM----INEVDADGNGTIDFPEFLTMMARKMKDSEEEIREAFRVFDKDG 94
Query: 69 DGSLDFVEF 77
+G + E
Sbjct: 95 NGFISAAEL 103
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 40.0 bits (92), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 28 FNSMDTNGDGRISRSEFLQFLG--KFNNTQWIQELFQSIDQNGDGSLDFVEFLTPFYFVS 85
F D++G G+I+ E + G + ++ W ++ Q D+N DG +DF EF+ +
Sbjct: 403 FQQFDSDGSGKITNEELGRLFGVTEVDDETW-HQVLQECDKNNDGEVDFEEFVEMMQKIC 461
Query: 86 NWRVK 90
+ +VK
Sbjct: 462 DVKVK 466
Score = 34.3 bits (77), Expect = 0.017, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 18/68 (26%)
Query: 28 FNSMDTNGDGRISRSEFLQFLGKFNNTQW----------------IQELFQSIDQNGDGS 71
F +D NGDG++ R E ++ K QW + + QS+D + +G
Sbjct: 320 FRQLDNNGDGQLDRKELIEGYRKL--MQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGY 377
Query: 72 LDFVEFLT 79
+++ EF+T
Sbjct: 378 IEYSEFVT 385
Score = 31.2 bits (69), Expect = 0.15, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 48 LGKFNNTQWIQELFQSIDQNGDGSLDFVEFLTPFYFVSNWR 88
L T+ + ++F+ +D NGDG LD E + + + W+
Sbjct: 307 LTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWK 347
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal
Sensor Domain Of Centrin
Length = 96
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 17 TGEVQNLAKNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLD 73
T E + + F+ DT+G G I E ++ LG + I+++ ID++G G++D
Sbjct: 25 TEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTID 84
Query: 74 FVEFLT 79
F EFLT
Sbjct: 85 FEEFLT 90
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor
State ( Crystal Form 2)
Length = 149
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F+ D +GDG I+ E ++ LG+ +Q++ +D +G+G++DF EFLT
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Score = 30.0 bits (66), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEFLQF---LGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
+ F D +G+G IS +E LG+ + + E+ + D +GDG +++ EF+T
Sbjct: 87 REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRESDIDGDGQVNYEEFVT 144
Score = 29.6 bits (65), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Query: 11 ICYNNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGK----FNNTQWIQELFQSIDQ 66
+ N E+Q++ N +D +G+G I EFL + + ++ + I+E F+ D+
Sbjct: 40 LGQNPTEAELQDM----INEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDK 95
Query: 67 NGDGSLDFVEF 77
+G+G + E
Sbjct: 96 DGNGFISAAEL 106
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
+ F D +G+G IS+ E ++ LG N ++ + Q +D +GDG +DF EF+T
Sbjct: 39 REAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVT 96
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 39.3 bits (90), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 8/58 (13%)
Query: 28 FNSMDTNGDGRISRSEFLQFLGKFNNTQWIQELFQSI--------DQNGDGSLDFVEF 77
F D + DG+ISR E LQ L Q +E ++I D++GDG++ FVEF
Sbjct: 120 FQLYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVEF 177
Score = 25.8 bits (55), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 19 EVQNLAKNFFNSMDTNGDGRISRSEFLQFLGKFNNTQWI 57
+++N+A D +GDG +S EF + L K + Q +
Sbjct: 152 QLENIADRTVQEADEDGDGAVSFVEFTKSLEKMDVEQKM 190
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 39.3 bits (90), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLTPF 81
K F+ D +GDG I+ E ++ LG +Q++ +D +G+G++DF EFLT
Sbjct: 13 KEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Query: 82 YFVSNW 87
+ +
Sbjct: 73 ARIMKY 78
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Query: 21 QNLA--KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFV 75
Q++A + F DTNGDG+IS SE L+ LG + ++ + ID +GDG + F
Sbjct: 8 QDIADRERIFKRFDTNGDGKISSSELGDALKTLGSVTPDE-VRRMMAEIDTDGDGFISFD 66
Query: 76 EF 77
EF
Sbjct: 67 EF 68
>pdb|1LA3|A Chain A, Solution Structure Of Recoverin Mutant, E85q
Length = 201
Score = 38.9 bits (89), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 37 GRISRSEFLQFLGKF----NNTQWIQELFQSIDQNGDGSLDFVEFLTPFYFVS 85
GRI+R EF KF + + Q +F+S D N DG+LDF +++ + S
Sbjct: 41 GRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKQYVIALHMTS 93
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 38.9 bits (89), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 17 TGEVQNLAKNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLD 73
T E + + F+ DT+G G I E ++ LG + I+++ ID++G G++D
Sbjct: 23 TEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTID 82
Query: 74 FVEFLT 79
F EFLT
Sbjct: 83 FEEFLT 88
>pdb|1OMV|A Chain A, Non-Myristoylated Bovine Recoverin (E85q Mutant) With
Calcium Bound To Ef-Hand 3
Length = 201
Score = 38.9 bits (89), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 37 GRISRSEFLQFLGKF----NNTQWIQELFQSIDQNGDGSLDFVEFLTPFYFVS 85
GRI+R EF KF + + Q +F+S D N DG+LDF +++ + S
Sbjct: 41 GRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKQYVIALHMTS 93
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 38.5 bits (88), Expect = 0.001, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Query: 28 FNSMDTNGDGRISRSEFLQFLG--KFNNTQWIQELFQSIDQNGDGSLDFVEF 77
F D +G+G+IS E G + W +E+ ID N DG +DF EF
Sbjct: 432 FQKFDQDGNGKISVDELASVFGLDHLESKTW-KEMISGIDSNNDGDVDFEEF 482
Score = 32.0 bits (71), Expect = 0.079, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 11 ICYNNATG-EVQNLAKNFFNSMDTNGDGRISRSEFLQFLGKFNNTQWIQEL---FQSIDQ 66
+C +G E+ +LA N +++++ L K + + +EL F+ ID+
Sbjct: 298 MCSKKESGIELPSLANAIENMRKFQNSQKLAQAALLYMASKLTSQEETKELTDIFRHIDK 357
Query: 67 NGDGSLDFVEFLTPFYFVSNWRV 89
NGDG LD E + + +S V
Sbjct: 358 NGDGQLDRQELIDGYSKLSGEEV 380
Score = 29.6 bits (65), Expect = 0.47, Method: Composition-based stats.
Identities = 15/65 (23%), Positives = 30/65 (46%), Gaps = 11/65 (16%)
Query: 26 NFFNSMDTNGDGRISRSEFLQFLGKFNNTQ-----------WIQELFQSIDQNGDGSLDF 74
+ F +D NGDG++ R E + K + + + + + D + +G +D+
Sbjct: 350 DIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDY 409
Query: 75 VEFLT 79
EF+T
Sbjct: 410 SEFVT 414
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
K F+ D +GDG I+ E ++ LG+ +Q++ +D +G+G++DF EFL
Sbjct: 10 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 66
Score = 30.4 bits (67), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEFLQF---LGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
K F D +G+G IS +E LG+ + + E+ + D +GDG +++ EF+
Sbjct: 83 KEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFV 139
Score = 28.9 bits (63), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Query: 11 ICYNNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGK----FNNTQWIQELFQSIDQ 66
+ N E+Q++ N +D +G+G I EFL + + ++ + ++E F+ D+
Sbjct: 36 LGQNPTEAELQDM----INEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDK 91
Query: 67 NGDGSLDFVEF 77
+G+G + E
Sbjct: 92 DGNGFISAAEL 102
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20
Peptide Complex
Length = 148
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
K F+ D +GDG I+ E ++ LG+ +Q++ +D +G+G++DF EFL
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Score = 30.4 bits (67), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEFLQF---LGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
K F D +G+G IS +E LG+ + + E+ + D +GDG +++ EF+
Sbjct: 86 KEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFV 142
Score = 28.9 bits (63), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Query: 11 ICYNNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGK----FNNTQWIQELFQSIDQ 66
+ N E+Q++ N +D +G+G I EFL + + ++ + ++E F+ D+
Sbjct: 39 LGQNPTEAELQDM----INEVDADGNGTIDFPEFLNLMARKMKDTDSEEKLKEAFRVFDK 94
Query: 67 NGDGSLDFVEF 77
+G+G + E
Sbjct: 95 DGNGFISAAEL 105
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac
Troponin C Bound To The N Terminal Domain Of Cardiac
Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac
Troponin C Bound To The N Terminal Domain Of Cardiac
Troponin I
Length = 81
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 14 NNATGEVQNLAKNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDG 70
+++ G+ + + F D N DG I E LQ G+ I+EL + D+N DG
Sbjct: 7 DDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDG 66
Query: 71 SLDFVEFL 78
+D+ EFL
Sbjct: 67 RIDYDEFL 74
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 16 ATGEV--QNLAKNFFNSMDTNGDGRISRSEFLQFL 48
ATGE ++ + D N DGRI EFL+F+
Sbjct: 43 ATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 77
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
K F+ D +GDG I+ E ++ LG+ +Q++ +D +G+G++DF EFL
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Score = 30.4 bits (67), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEFLQF---LGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
K F D +G+G IS +E LG+ + + E+ + D +GDG +++ EF+
Sbjct: 86 KEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFV 142
Score = 28.9 bits (63), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Query: 11 ICYNNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGK----FNNTQWIQELFQSIDQ 66
+ N E+Q++ N +D +G+G I EFL + + ++ + ++E F+ D+
Sbjct: 39 LGQNPTEAELQDM----INEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDK 94
Query: 67 NGDGSLDFVEF 77
+G+G + E
Sbjct: 95 DGNGFISAAEL 105
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 14 NNATGEVQNLAKNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDG 70
+++ G+ + + F D N DG I E LQ G+ I+EL + D+N DG
Sbjct: 87 DDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDG 146
Query: 71 SLDFVEFL 78
+D+ EFL
Sbjct: 147 RIDYDEFL 154
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 36 DGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
DG IS E ++ LG+ + +QE+ +D++G G++DF EFL
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLV 79
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 16 ATGEV--QNLAKNFFNSMDTNGDGRISRSEFLQFL 48
ATGE ++ + D N DGRI EFL+F+
Sbjct: 123 ATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F D +GDG I+ E ++ LG+ +Q++ +D +G+G++DF EFL+
Sbjct: 13 KEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLS 70
Score = 28.9 bits (63), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 28 FNSMDTNGDGRISRSEFLQF---LGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
F D +G+G IS +E LG+ + E+ + D +GDG +++ EF+
Sbjct: 89 FKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFV 142
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 8/71 (11%)
Query: 11 ICYNNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGKF----NNTQWIQELFQSIDQ 66
+ N E+Q++ N +D +G+G I EFL + + ++ + + E F+ D+
Sbjct: 39 LGQNPTEAELQDM----INEVDADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDR 94
Query: 67 NGDGSLDFVEF 77
+G+G + E
Sbjct: 95 DGNGLISAAEL 105
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F D +GDG I+ E ++ LG+ +Q++ +D +G+G++DF EFL+
Sbjct: 13 KEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLS 70
Score = 28.9 bits (63), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 28 FNSMDTNGDGRISRSEFLQF---LGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
F D +G+G IS +E LG+ + E+ + D +GDG +++ EF+
Sbjct: 89 FKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFV 142
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 8/71 (11%)
Query: 11 ICYNNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGKF----NNTQWIQELFQSIDQ 66
+ N E+Q++ N +D +G+G I EFL + + ++ + + E F+ D+
Sbjct: 39 LGQNPTEAELQDM----INEVDADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDR 94
Query: 67 NGDGSLDFVEF 77
+G+G + E
Sbjct: 95 DGNGLISAAEL 105
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 38.1 bits (87), Expect = 0.001, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 28 FNSMDTNGDGRISRSEFLQFLGKFNNTQWIQEL---FQSIDQNGDGSLDFVEFL 78
F D +G G+IS E + + +++ ++EL + +D N DG +DF EF+
Sbjct: 423 FKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFV 476
Score = 30.8 bits (68), Expect = 0.20, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 17/68 (25%)
Query: 28 FNSMDTNGDGRISRS-------EFLQFLGKFNNT----------QWIQELFQSIDQNGDG 70
F +DTN DG + R EF++ G +N+ I L +D +G G
Sbjct: 337 FRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMDGSG 396
Query: 71 SLDFVEFL 78
S+++ EF+
Sbjct: 397 SIEYSEFI 404
Score = 26.9 bits (58), Expect = 3.0, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 48 LGKFNNTQWIQELFQSIDQNGDGSLDFVEFLTPFY 82
L + T+ + E+F+ +D N DG LD E + ++
Sbjct: 324 LTTLDETKQLTEIFRKLDTNNDGMLDRDELVRGYH 358
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 28 FNSMDTNGDGRISRSEFLQFLGK--FNNT---QWIQELFQSIDQNGDGSLDFVEFL 78
F D +G+G+IS E + G+ N + I L Q +D NGDG +DF EF+
Sbjct: 135 FKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFM 190
Score = 33.5 bits (75), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 9 AIICYNNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGKFNNTQW---IQELFQSID 65
II + E+ NL +N F ++D + G +S E L L K + I ++ + ID
Sbjct: 45 TIIAKHLCDVEINNL-RNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDID 103
Query: 66 QNGDGSLDFVEFLT 79
N G + + +FL
Sbjct: 104 SNASGQIHYTDFLA 117
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain
Of Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr,
40 Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle,
Nmr, Minimized Average Structure
Length = 90
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F+ D +G G IS E ++ LG+ + + + + +D++G G++DF EFL
Sbjct: 23 KAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 80
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
30 Structures
Length = 76
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 14 NNATGEVQNLAKNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDG 70
+++ G+ + + F D N DG I E LQ G+ I+EL + D+N DG
Sbjct: 2 DDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDG 61
Query: 71 SLDFVEFL 78
+D+ EFL
Sbjct: 62 RIDYDEFL 69
Score = 27.3 bits (59), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 16 ATGEV--QNLAKNFFNSMDTNGDGRISRSEFLQFL 48
ATGE ++ + D N DGRI EFL+F+
Sbjct: 38 ATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 72
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment
Of Troponin I
Length = 159
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F+ D +G G IS E ++ LG+ + + + + +D++G G++DF EFL
Sbjct: 20 KAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLV 77
Score = 33.9 bits (76), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Query: 14 NNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFL---GKFNNTQWIQELFQSIDQNGDG 70
+A G+ + F D N DG I E + G+ + I+ L + D+N DG
Sbjct: 85 EDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDG 144
Query: 71 SLDFVEFL 78
+DF EFL
Sbjct: 145 RIDFDEFL 152
Score = 26.2 bits (56), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 8/70 (11%)
Query: 27 FFNSMDTNGDGRISRSEFLQFL-------GKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
+D +G G I EFL + K + + + E F+ D+N DG +D E L
Sbjct: 58 IIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYID-AEELA 116
Query: 80 PFYFVSNWRV 89
+ S V
Sbjct: 117 EIFRASGEHV 126
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal
Muscle Troponin-C
Length = 76
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F+ D +G G IS E ++ LG+ + + + + +D++G G++DF EFL
Sbjct: 12 KAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 69
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 14 NNATGEVQNLAKNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDG 70
+++ G+ + + F D N DG I E LQ G+ I+EL + D+N DG
Sbjct: 87 DDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDG 146
Query: 71 SLDFVEFL 78
+D+ EFL
Sbjct: 147 RIDYDEFL 154
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 36 DGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
DG IS E ++ LG+ + +QE+ +D++G G++DF EFL
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLV 79
Score = 27.3 bits (59), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 16 ATGEV--QNLAKNFFNSMDTNGDGRISRSEFLQFL 48
ATGE ++ + D N DGRI EFL+F+
Sbjct: 123 ATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
>pdb|2I18|A Chain A, The Refined Structure Of C-Terminal Domain Of An Ef-Hand
Calcium Binding Protein From Entamoeba Histolytica
Length = 64
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 25 KNFFNSMDTNGDGRISRSEFLQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
K + MD +GDG++++ E F K + + + E D NGDG + EFL
Sbjct: 8 KVLYKLMDVDGDGKLTKEEVTSFFKK-HGIEKVAEQVMKADANGDGYITLEEFL 60
Score = 26.2 bits (56), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Query: 20 VQNLAKNFFNSMDTNGDGRISRSEFLQF 47
++ +A+ + D NGDG I+ EFL+F
Sbjct: 36 IEKVAEQVMKA-DANGDGYITLEEFLEF 62
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F+ D +G G IS E ++ LG+ + + + + +D++G G++DF EFL
Sbjct: 20 KAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLV 77
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Query: 14 NNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFL---GKFNNTQWIQELFQSIDQNGDG 70
+A G+ + F D N DG I E + G+ + I+ L + D+N DG
Sbjct: 85 EDAKGKSEEELAELFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDG 144
Query: 71 SLDFVEFL 78
+DF EFL
Sbjct: 145 RIDFDEFL 152
Score = 28.9 bits (63), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 8/70 (11%)
Query: 27 FFNSMDTNGDGRISRSEFLQFL-------GKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
+D +G G I EFL + K + + + ELF+ D+N DG +D E L
Sbjct: 58 IIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELAELFRIFDRNADGYID-AEELA 116
Query: 80 PFYFVSNWRV 89
+ S V
Sbjct: 117 EIFRASGEHV 126
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
30 Structures
Length = 89
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 36 DGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
DG IS E ++ LG+ + +QE+ +D++G G++DF EFL
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLV 79
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 37.0 bits (84), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 36 DGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
DG IS E ++ LG+ + +QE+ +D++G G++DF EFL
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLV 79
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 37.0 bits (84), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 14 NNATGEVQNLAKNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDG 70
+++ G+ + + F D N DG I E LQ G+ I+EL + D+N DG
Sbjct: 87 DDSKGKSEEELSDLFRMXDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDG 146
Query: 71 SLDFVEFL 78
+D+ EFL
Sbjct: 147 RIDYDEFL 154
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 36 DGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
DG IS E ++ LG+ + +QE+ +D++G G++DF EFL
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLV 79
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 16 ATGEV--QNLAKNFFNSMDTNGDGRISRSEFLQFL 48
ATGE ++ + D N DGRI EFL+F+
Sbjct: 123 ATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 37.0 bits (84), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 36 DGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
DG IS E ++ LG+ + +QE+ +D++G G++DF EFL
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLV 79
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin
Delta At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin
Delta At 2.4 Angstroms
Length = 193
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Query: 19 EVQNLAKNFFNSMDTNGDGRISRSEFLQFLGKF----NNTQWIQELFQSIDQNGDGSLDF 74
E+Q K F + G +S EF + G F + +++ + +F++ D NGDG++DF
Sbjct: 26 EIQEWYKGFLRDCPS---GHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDF 82
Query: 75 VEFLTPFYFVSNWRVK 90
EF+ S +++
Sbjct: 83 REFIIALSVTSRGKLE 98
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 18 GEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGKFNNTQWIQEL---FQSIDQNGDGSLDF 74
G+ A++ F + D NGDG I EF+ L + + Q+L F D +G+G +
Sbjct: 59 GDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISK 118
Query: 75 VEFL 78
E L
Sbjct: 119 AEML 122
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 40/90 (44%), Gaps = 15/90 (16%)
Query: 4 EFHDSAIICYNNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGKF------------ 51
+F + I + G+++ K F+ D +G+G IS++E L+ +
Sbjct: 81 DFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPE 140
Query: 52 ---NNTQWIQELFQSIDQNGDGSLDFVEFL 78
+ +++F+ +D N DG L EF+
Sbjct: 141 DESTPEKRTEKIFRQMDTNRDGKLSLEEFI 170
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 11/39 (28%), Positives = 20/39 (51%)
Query: 8 SAIICYNNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQ 46
S+++ + + F MDTN DG++S EF++
Sbjct: 133 SSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIR 171
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain
Of Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain
Of Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain
Of Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain
Of Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain
Of Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F+ D +GDG I+ E + LG+ +Q+ +D +G+G++DF EFLT
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEFLT 70
Score = 28.5 bits (62), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEFLQF---LGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
+ F D +G+G IS +E LG+ + + E + D +GDG +++ EF+
Sbjct: 86 REAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYEEFV 142
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F+ D +G G IS E ++ LG+ + + + + +D++G G++DF EFL
Sbjct: 23 KAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 80
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 14 NNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFL---GKFNNTQWIQELFQSIDQNGDG 70
+A G+ + N F D N DG I E + L G+ + I++L + D+N DG
Sbjct: 88 EDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDG 147
Query: 71 SLDFVEFL 78
+DF EFL
Sbjct: 148 RIDFDEFL 155
Score = 25.8 bits (55), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 15 NATGE--VQNLAKNFFNSMDTNGDGRISRSEFLQFL 48
ATGE ++ ++ D N DGRI EFL+ +
Sbjct: 123 RATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMM 158
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
K F+ D +GDG I+ E ++ LG+ +Q++ +D +G+G++DF EFL
Sbjct: 13 KEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The
Ca2+- Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The
Ca2+- Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F+ D +G G IS E ++ LG+ + + + + +D++G G++DF EFL
Sbjct: 23 KAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 80
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 14 NNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFL---GKFNNTQWIQELFQSIDQNGDG 70
+A G+ + N F D N DG I E + L G+ + I++L + D+N DG
Sbjct: 88 EDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDG 147
Query: 71 SLDFVEFL 78
+DF EFL
Sbjct: 148 RIDFDEFL 155
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C
In The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F+ D +G G IS E ++ LG+ + + + + +D++G G++DF EFL
Sbjct: 23 KAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 80
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 14 NNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFL---GKFNNTQWIQELFQSIDQNGDG 70
+A G+ + + F D N DG I E + L G+ + I++L + D+N DG
Sbjct: 88 EDAKGKSEEELADCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDG 147
Query: 71 SLDFVEFL 78
+DF EFL
Sbjct: 148 RIDFDEFL 155
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin In The Presence Of 10
Millimolar Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin In The Presence Of 10
Millimolar Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin In The Presence Of 10
Millimolar Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin In The Presence Of 10
Millimolar Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin In The Presence Of 10
Millimolar Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In
Complex With Calmodulin In The Presence Of 10
Millimolar Exogenously Added Calcium Chloride
Length = 149
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F+ D +GDG I+ E + LG+ +Q+ +D +G+G++DF EFLT
Sbjct: 14 KEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEFLT 71
Score = 26.9 bits (58), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEFLQF---LGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
+ F D +G+G IS +E LG+ + + + + D +GDG +++ EF+
Sbjct: 87 REAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDQXIREADIDGDGQVNYEEFV 143
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 14 NNATGEVQNLAKNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDG 70
+++ G+ + + F D N DG I E LQ G+ I+EL + D+N DG
Sbjct: 87 DDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDG 146
Query: 71 SLDFVEFL 78
+D+ EFL
Sbjct: 147 RIDYDEFL 154
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 36 DGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
DG IS E ++ LG+ + +QE+ +D++G G++DF EFL
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLV 79
Score = 27.3 bits (59), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 16 ATGEV--QNLAKNFFNSMDTNGDGRISRSEFLQFL 48
ATGE ++ + D N DGRI EFL+F+
Sbjct: 123 ATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin
C At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 8/75 (10%)
Query: 13 YNNATGEVQNLAKNFFNS-----MDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSI 64
Y A ++ + KN F + + DG IS E ++ LG+ + +QE+ +
Sbjct: 5 YKAAVEQLTDEQKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEV 64
Query: 65 DQNGDGSLDFVEFLT 79
D++G G++DF EFL
Sbjct: 65 DEDGSGTVDFDEFLV 79
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F+ D +G G IS E ++ LG+ + + + + +D++G G++DF EFL
Sbjct: 23 KAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 80
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 14 NNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFL---GKFNNTQWIQELFQSIDQNGDG 70
+A G+ + ++ F D N DG I E + L G+ + I++L + D+N DG
Sbjct: 88 EDAKGKSEEELEDCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDG 147
Query: 71 SLDFVEFL 78
+DF EFL
Sbjct: 148 RIDFDEFL 155
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Query: 11 ICYNNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGKFNNTQWIQELFQSIDQNGDG 70
+C + E++ L K F +D + G +S EF+ L + +Q + D +G+G
Sbjct: 11 MCSHFDADEIKRLGKRF-KKLDLDNSGSLSVEEFMS-LPELQQNPLVQRVIDIFDTDGNG 68
Query: 71 SLDFVEFLTPFYFVSNWRVKCD 92
+DF EF+ VS + VK D
Sbjct: 69 EVDFKEFIEG---VSQFSVKGD 87
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F+ D +G G IS E ++ LG+ + + + + +D++G G++DF EFL
Sbjct: 20 KAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 77
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 14 NNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFL---GKFNNTQWIQELFQSIDQNGDG 70
+A G+ + N F D N DG I E + L G+ + I++L + D+N DG
Sbjct: 85 EDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDG 144
Query: 71 SLDFVEFL 78
+DF EFL
Sbjct: 145 RIDFDEFL 152
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Query: 11 ICYNNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGKFNNTQWIQELFQSIDQNGDG 70
+C + E++ L K F +D + G +S EF+ L + +Q + D +G+G
Sbjct: 10 MCSHFDADEIKRLGKRF-KKLDLDNSGSLSVEEFMS-LPELQQNPLVQRVIDIFDTDGNG 67
Query: 71 SLDFVEFLTPFYFVSNWRVKCD 92
+DF EF+ VS + VK D
Sbjct: 68 EVDFKEFIEG---VSQFSVKGD 86
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan
Mutant Of Human Cardiac Troponin C
Length = 161
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 36 DGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
DG IS E ++ LG+ + +QE+ +D++G G++DF EFL
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLV 79
Score = 33.9 bits (76), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 14 NNATGEVQNLAKNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDG 70
+++ G+ + + F D N DG I E LQ G+ I+EL + D+N DG
Sbjct: 87 DDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDG 146
Query: 71 SLDFVEFL 78
+D+ E L
Sbjct: 147 RIDYDEXL 154
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Query: 12 CYNNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGKFN---NTQWIQELFQSIDQNG 68
C + +Q LA+ FF +D +G + EF Q L K + + + + D+NG
Sbjct: 28 CLSRGASGIQGLAR-FFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNG 86
Query: 69 DGSLDFVEFLTPF 81
G+LD EFL
Sbjct: 87 SGTLDLEEFLRAL 99
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 36 DGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
DG IS E ++ LG+ + +QE+ +D++G G++DF EFL
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLV 79
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 14 NNATGEVQNLAKNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDG 70
+++ G+ + + F D N DG I E LQ G+ I+EL + D+N DG
Sbjct: 87 DDSKGKSEEELSDLFRMWDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDG 146
Query: 71 SLDFVEFL 78
+D+ EFL
Sbjct: 147 RIDYDEFL 154
Score = 27.3 bits (59), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 16 ATGEV--QNLAKNFFNSMDTNGDGRISRSEFLQFL 48
ATGE ++ + D N DGRI EFL+F+
Sbjct: 123 ATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 36 DGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
DG IS E ++ LG+ + +QE+ +D++G G++DF EFL
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLV 79
Score = 34.3 bits (77), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 14 NNATGEVQNLAKNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDG 70
+++ G+ + + F D N DG I E LQ G+ I+EL + D+N DG
Sbjct: 87 DDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDG 146
Query: 71 SLDFVEFL 78
+D+ E+L
Sbjct: 147 RIDYDEWL 154
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 36.2 bits (82), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
K F+ D +GDG I+ E ++ LG+ +Q++ +D +G+G++DF EFL
Sbjct: 14 KEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEFLQF---LGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
K F D + +G IS +E LG+ + + E+ + D +GDG +++ EF+
Sbjct: 87 KEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 143
Score = 26.6 bits (57), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 10/61 (16%)
Query: 14 NNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLG-KFNNTQWIQELFQSI-----DQN 67
N E+Q++ N +D +G+G I EFL + K +T +EL ++ DQN
Sbjct: 43 NPTEAELQDM----INEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQN 98
Query: 68 G 68
G
Sbjct: 99 G 99
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 36.2 bits (82), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
K F+ D +GDG I+ E ++ LG+ +Q++ +D +G+G++DF EFL
Sbjct: 14 KEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Score = 27.3 bits (59), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEFLQF---LGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
K F D + +G IS +E LG+ + + E+ + D +GDG +++ EF+
Sbjct: 87 KEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYDEFV 143
Score = 26.6 bits (57), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 10/61 (16%)
Query: 14 NNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLG-KFNNTQWIQELFQSI-----DQN 67
N E+Q++ N +D +G+G I EFL + K +T +EL ++ DQN
Sbjct: 43 NPTEAELQDM----INEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQN 98
Query: 68 G 68
G
Sbjct: 99 G 99
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 36.2 bits (82), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 8/75 (10%)
Query: 13 YNNATGEVQNLAKNFFNS-----MDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSI 64
Y A ++ KN F + + DG IS E ++ LG+ + +QE+ +
Sbjct: 5 YKAAVEQLTEEQKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEV 64
Query: 65 DQNGDGSLDFVEFLT 79
D++G G++DF EFL
Sbjct: 65 DEDGSGTVDFDEFLV 79
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 36.2 bits (82), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
K F+ D +GDG I+ E ++ LG+ ++++ ID++G+G++DF EFL
Sbjct: 13 KEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDFPEFL 69
Score = 30.8 bits (68), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
+ F D +G+G +S +E + LG+ + + + E+ ++ D +GDG +++ EF+
Sbjct: 86 REAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDGQVNYEEFV 142
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 36.2 bits (82), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 17 TGEVQNLAKNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLD 73
T E + + F+ DT+G G I E ++ LG + I+++ ID++G G++D
Sbjct: 3 TEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTID 62
Query: 74 FVEFL 78
F EFL
Sbjct: 63 FEEFL 67
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEF 77
+ F D NGDG+IS +E L+ LG + ++ + ID +GDG + F EF
Sbjct: 12 ERIFKRFDANGDGKISAAELGEALKTLGSITPDE-VKHMMAEIDTDGDGFISFQEF 66
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 8/75 (10%)
Query: 13 YNNATGEVQNLAKNFFNS-----MDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSI 64
Y A ++ KN F + + DG IS E ++ LG+ + +QE+ +
Sbjct: 5 YKAAVEQLTEEQKNEFKAAFDIFVQGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEV 64
Query: 65 DQNGDGSLDFVEFLT 79
D++G G++DF EFL
Sbjct: 65 DEDGSGTVDFDEFLV 79
>pdb|1MXL|C Chain C, Structure Of Cardiac Troponin C-troponin I Complex
pdb|1LXF|C Chain C, Structure Of The Regulatory N-Domain Of Human Cardiac
Troponin C In Complex With Human Cardiac
Troponin-I(147- 163) And Bepridil
pdb|1AP4|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Saturated State, Nmr, 40 Structures
pdb|1SPY|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Free State, Nmr, 40 Structures
pdb|2KRD|C Chain C, Solution Structure Of The Regulatory Domain Of Human
Cardiac C In Complex With The Switch Region Of Cardiac
Troponin I A
pdb|2L1R|A Chain A, The Structure Of The Calcium-Sensitizer, Dfbp-O, In
Complex With The N-Domain Of Troponin C And The Switch
Region Of Troponin I
pdb|3SD6|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.4
Resolution.
pdb|3SWB|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.7 A
Resolution
pdb|4GJE|A Chain A, Crystal Structure Of The Refolded Amino-terminal Domain
Of Human Cardiac Troponin C In Complex With Cadmium
Length = 89
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 36 DGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
DG IS E ++ LG+ + +QE+ +D++G G++DF EFL
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLV 79
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 28 FNSMDTNGDGRISRSEFLQFLG--KFNNTQWIQELFQSIDQNGDGSLDFVEFLTPFYFVS 85
F D++G G+I+ E + G + ++ W Q + Q D+N DG +DF EF+ +
Sbjct: 129 FQQFDSDGSGKITNEELGRLFGVTEVDDETWHQ-VLQECDKNNDGEVDFEEFVEMMQKIC 187
Query: 86 NWRV 89
+ +V
Sbjct: 188 DVKV 191
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 48 LGKFNNTQWIQELFQSIDQNGDGSLDFVEFLTPFYFVSNWR 88
L T+ + ++F+ +D NGDG LD E + + + W+
Sbjct: 33 LTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWK 73
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 18/69 (26%)
Query: 27 FFNSMDTNGDGRISRSEFLQFLGKFNNTQW----------------IQELFQSIDQNGDG 70
F +D NGDG++ R E ++ K QW + + QS+D + +G
Sbjct: 45 IFRQLDNNGDGQLDRKELIEGYRKL--MQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNG 102
Query: 71 SLDFVEFLT 79
+++ EF+T
Sbjct: 103 YIEYSEFVT 111
>pdb|2PMY|A Chain A, Ef-Hand Domain Of Human Rasef
pdb|2PMY|B Chain B, Ef-Hand Domain Of Human Rasef
Length = 91
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 13 YNNATGEVQNLAK--NFFNSMDTNGDGRISRSEFLQFLGKFN-NTQWIQELFQSIDQNGD 69
+ A G+ + LA+ + F + D N GR+ R EF + + +FQ +D + D
Sbjct: 16 FQGADGDGEELARLRSVFAACDANRSGRLEREEFRALCTELRVRPADAEAVFQRLDADRD 75
Query: 70 GSLDFVEFLTPF 81
G++ F EF F
Sbjct: 76 GAITFQEFARGF 87
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 15 NATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFL---GKFNNTQWIQELFQSIDQNGDGS 71
+A G+ + N F D N DG I E + L G+ + I++L + D+N DG
Sbjct: 3 DAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGR 62
Query: 72 LDFVEFLTPFYFV 84
+DF EFL V
Sbjct: 63 IDFDEFLKMMEGV 75
>pdb|2SCP|A Chain A, Structure Of A Sarcoplasmic Calcium-Binding Protein From
Nereis Diversicolor Refined At 2.0 Angstroms Resolution
pdb|2SCP|B Chain B, Structure Of A Sarcoplasmic Calcium-Binding Protein From
Nereis Diversicolor Refined At 2.0 Angstroms Resolution
pdb|1Q80|A Chain A, Solution Structure And Dynamics Of Nereis Sarcoplasmic
Calcium Binding Protein
Length = 174
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Query: 10 IICYNNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGKFN-NTQWIQELFQSIDQNG 68
++ A V+ FF ++DTN D ISR E+ F G + F +ID N
Sbjct: 82 MVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLGLDKTMAPASFDAIDTNN 141
Query: 69 DGSLDFVEFL 78
DG L EF+
Sbjct: 142 DGLLSLEEFV 151
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 35.4 bits (80), Expect = 0.008, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F+ D +GDG I+ + ++ LG+ +Q++ + +G+G++DF +FLT
Sbjct: 314 KEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNGTIDFPQFLT 371
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F+ D +G G IS ++ LG+ + + + + +D++G G++DF EFL
Sbjct: 23 KAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 80
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 35.0 bits (79), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Query: 19 EVQNLAKNFFNSMDTNGDGRISRSEFLQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
E++ L K F +D + G +S EF+ L + +Q + D +G+G +DF EF+
Sbjct: 5 EIKRLGKRF-KKLDLDNSGSLSVEEFMS-LPELQQNPLVQRVIDIFDTDGNGEVDFKEFI 62
Query: 79 TPFYFVSNWRVKCD 92
VS + VK D
Sbjct: 63 EG---VSQFSVKGD 73
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 35.0 bits (79), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 18 GEVQNLAKNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDF 74
G+ + + F D N DG I E LQ G+ I+EL + D+N DG +D+
Sbjct: 3 GKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDY 62
Query: 75 VEFL 78
EFL
Sbjct: 63 DEFL 66
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 16 ATGEV--QNLAKNFFNSMDTNGDGRISRSEFLQFL 48
ATGE ++ + D N DGRI EFL+F+
Sbjct: 35 ATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 69
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Query: 19 EVQNLAKNFFNSMDTNGDGRISRSEFLQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
E++ L K F +D + G +S EF+ L + +Q + D +G+G +DF EF+
Sbjct: 4 EIKRLGKRF-KKLDLDNSGSLSVEEFMS-LPELQQNPLVQRVIDIFDTDGNGEVDFKEFI 61
Query: 79 TPFYFVSNWRVKCD 92
VS + VK D
Sbjct: 62 EG---VSQFSVKGD 72
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The
Cardiac Regulatory Protein Troponin C
Length = 72
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 18 GEVQNLAKNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDF 74
G+ + + F D N DG I E LQ G+ I+EL + D+N DG +D+
Sbjct: 2 GKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDY 61
Query: 75 VEFL 78
EFL
Sbjct: 62 DEFL 65
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 16 ATGEV--QNLAKNFFNSMDTNGDGRISRSEFLQFL 48
ATGE ++ + D N DGRI EFL+F+
Sbjct: 34 ATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 68
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 34.7 bits (78), Expect = 0.012, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 28 FNSMDTNGDGRISRSEFLQFLG--KFNNTQWIQELFQSIDQNGDGSLDFVEF 77
F D++ G+IS +E G ++ W + + +D+N DG +DF EF
Sbjct: 424 FRXFDSDNSGKISSTELATIFGVSDVDSETW-KSVLSEVDKNNDGEVDFDEF 474
Score = 28.1 bits (61), Expect = 1.2, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Query: 19 EVQNLAKNFFNSMDTNGDGRISRSEFLQFLGKFNNTQWIQEL---FQSIDQNGDGSLDFV 75
+V +L N G +++++ L K + +EL F D+NGDG LD
Sbjct: 296 DVPSLDNAILNIRQFQGTQKLAQAALLYXGSKLTSQDETKELTAIFHKXDKNGDGQLDRA 355
Query: 76 EFL 78
E +
Sbjct: 356 ELI 358
Score = 28.1 bits (61), Expect = 1.2, Method: Composition-based stats.
Identities = 13/66 (19%), Positives = 32/66 (48%), Gaps = 14/66 (21%)
Query: 28 FNSMDTNGDGRISRSEFLQFLGKFNNTQW--------------IQELFQSIDQNGDGSLD 73
F+ D NGDG++ R+E ++ + + + ++ ++D + +G ++
Sbjct: 341 FHKXDKNGDGQLDRAELIEGYKELXRXKGQDASXLDASAVEHEVDQVLDAVDFDKNGYIE 400
Query: 74 FVEFLT 79
+ EF+T
Sbjct: 401 YSEFVT 406
>pdb|3MSE|B Chain B, Crystal Structure Of C-Terminal Domain Of Pf110239
Length = 180
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 27 FFNSMDTNGDGRISRSEFLQFLGKFNNTQW-IQELFQSIDQNGDGSLDFVEFLTPFY 82
F +DTN +G +S E L +W I + Q++D N G++ + EF+ Y
Sbjct: 44 LFYKLDTNHNGSLSHREIYTVLASVGIKKWDINRILQALDINDRGNITYTEFMAGCY 100
Score = 27.3 bits (59), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 52 NNTQWIQELFQSIDQNGDGSLDFVEFLT 79
N+ ++I ELF +D N +GSL E T
Sbjct: 36 NHIKYINELFYKLDTNHNGSLSHREIYT 63
>pdb|2D8N|A Chain A, Crystal Structure Of Human Recoverin At 2.2 A Resolution
Length = 207
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 37 GRISRSEFLQFLGKF----NNTQWIQELFQSIDQNGDGSLDFVEFLTPFYFVS 85
GRI++ +F KF + + Q +F+S D N DG+LDF E++ + +
Sbjct: 49 GRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNLDGTLDFKEYVIALHXTT 101
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 34.7 bits (78), Expect = 0.013, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 28 FNSMDTNGDGRISRSEFLQFLG--KFNNTQWIQELFQSIDQNGDGSLDFVEF 77
F D++ G+IS +E G ++ W + + +D+N DG +DF EF
Sbjct: 447 FRMFDSDNSGKISSTELATIFGVSDVDSETW-KSVLSEVDKNNDGEVDFDEF 497
Score = 30.8 bits (68), Expect = 0.19, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 14/66 (21%)
Query: 28 FNSMDTNGDGRISRSEFLQ--------------FLGKFNNTQWIQELFQSIDQNGDGSLD 73
F+ MD NGDG++ R+E ++ L + ++ ++D + +G ++
Sbjct: 364 FHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIE 423
Query: 74 FVEFLT 79
+ EF+T
Sbjct: 424 YSEFVT 429
Score = 30.0 bits (66), Expect = 0.33, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Query: 19 EVQNLAKNFFNSMDTNGDGRISRSEFLQFLGKFNNTQWIQEL---FQSIDQNGDGSLDFV 75
+V +L N G +++++ L K + +EL F +D+NGDG LD
Sbjct: 319 DVPSLDNAILNIRQFQGTQKLAQAALLYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRA 378
Query: 76 EFL 78
E +
Sbjct: 379 ELI 381
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 34.7 bits (78), Expect = 0.013, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 28 FNSMDTNGDGRISRSEFLQFLG--KFNNTQWIQELFQSIDQNGDGSLDFVEF 77
F D++ G+IS +E G ++ W + + +D+N DG +DF EF
Sbjct: 448 FRMFDSDNSGKISSTELATIFGVSDVDSETW-KSVLSEVDKNNDGEVDFDEF 498
Score = 30.8 bits (68), Expect = 0.19, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 14/66 (21%)
Query: 28 FNSMDTNGDGRISRSEFLQ--------------FLGKFNNTQWIQELFQSIDQNGDGSLD 73
F+ MD NGDG++ R+E ++ L + ++ ++D + +G ++
Sbjct: 365 FHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIE 424
Query: 74 FVEFLT 79
+ EF+T
Sbjct: 425 YSEFVT 430
Score = 30.0 bits (66), Expect = 0.32, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Query: 19 EVQNLAKNFFNSMDTNGDGRISRSEFLQFLGKFNNTQWIQEL---FQSIDQNGDGSLDFV 75
+V +L N G +++++ L K + +EL F +D+NGDG LD
Sbjct: 320 DVPSLDNAILNIRQFQGTQKLAQAALLYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRA 379
Query: 76 EFL 78
E +
Sbjct: 380 ELI 382
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 34.7 bits (78), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 26 NFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
+ F D N DG I E LQ G+ I+EL + D+N DG +D+ EFL
Sbjct: 9 DLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 64
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 16 ATGEV--QNLAKNFFNSMDTNGDGRISRSEFLQFL 48
ATGE ++ + D N DGRI EFL+F+
Sbjct: 33 ATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 67
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 34.7 bits (78), Expect = 0.014, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 28 FNSMDTNGDGRISRSEFLQFLG--KFNNTQWIQELFQSIDQNGDGSLDFVEF 77
F D++ G+IS +E G ++ W + + +D+N DG +DF EF
Sbjct: 424 FRMFDSDNSGKISSTELATIFGVSDVDSETW-KSVLSEVDKNNDGEVDFDEF 474
Score = 30.8 bits (68), Expect = 0.21, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 14/66 (21%)
Query: 28 FNSMDTNGDGRISRSEFLQ--------------FLGKFNNTQWIQELFQSIDQNGDGSLD 73
F+ MD NGDG++ R+E ++ L + ++ ++D + +G ++
Sbjct: 341 FHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIE 400
Query: 74 FVEFLT 79
+ EF+T
Sbjct: 401 YSEFVT 406
Score = 30.0 bits (66), Expect = 0.35, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Query: 19 EVQNLAKNFFNSMDTNGDGRISRSEFLQFLGKFNNTQWIQEL---FQSIDQNGDGSLDFV 75
+V +L N G +++++ L K + +EL F +D+NGDG LD
Sbjct: 296 DVPSLDNAILNIRQFQGTQKLAQAALLYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRA 355
Query: 76 EFL 78
E +
Sbjct: 356 ELI 358
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 34.3 bits (77), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 12/60 (20%)
Query: 28 FNSMDTNGDGRISRSEFLQFLGKFN----------NTQWIQELFQSIDQNGDGSLDFVEF 77
F D + DG I+ +E L FN + ++++ + +D+NGDG +DF EF
Sbjct: 131 FRVFDVDNDGEITTAELAHVL--FNGNKRGNITERDVNQVKKMIREVDKNGDGKIDFYEF 188
Score = 26.9 bits (58), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Query: 10 IICYNNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGK--FNNTQWIQELFQSIDQN 67
II + +VQ L F + +D G G I++ + + L + L ID +
Sbjct: 44 IIAQQSNDYDVQKLKAAFLH-LDEEGKGNITKLQLRKGLERSGLMLPPNFDLLLDQIDSD 102
Query: 68 GDGSLDFVEFLTP 80
G G++D+ EFL
Sbjct: 103 GSGNIDYTEFLAA 115
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 33.9 bits (76), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Query: 28 FNSMDTNGDGRISRSEFLQFLG--KFNNTQWIQELFQSIDQNGDGSLDFVEF 77
F D +G+G+IS E G + W +E+ ID N DG +DF EF
Sbjct: 149 FQKFDQDGNGKISVDELASVFGLDHLESKTW-KEMISGIDSNNDGDVDFEEF 199
Score = 32.0 bits (71), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Query: 19 EVQNLAKNFFNSMDTNGDGRISRSEFLQFLGKFNNTQWIQEL---FQSIDQNGDGSLDFV 75
E+ +LA N +++++ L K + + +EL F+ ID+NGDG LD
Sbjct: 24 ELPSLANAIENMRKFQNSQKLAQAALLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQ 83
Query: 76 EFLTPFYFVSNWRV 89
E + + +S V
Sbjct: 84 ELIDGYSKLSGEEV 97
Score = 26.9 bits (58), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/65 (23%), Positives = 30/65 (46%), Gaps = 11/65 (16%)
Query: 26 NFFNSMDTNGDGRISRSEFLQFLGKFNNTQ-----------WIQELFQSIDQNGDGSLDF 74
+ F +D NGDG++ R E + K + + + + + D + +G +D+
Sbjct: 67 DIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDY 126
Query: 75 VEFLT 79
EF+T
Sbjct: 127 SEFVT 131
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 33.9 bits (76), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 28 FNSMDTNGDGRISRSEFLQFL---GKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
F ++D G+G I +E Q L G + ++EL + + +GDG++++ F+
Sbjct: 82 FRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGAINYESFV 135
>pdb|1SYM|A Chain A, 3-D Solution Structure Of Reduced Apo-S100b From Rat,
Nmr, 20 Structures
pdb|1SYM|B Chain B, 3-D Solution Structure Of Reduced Apo-S100b From Rat,
Nmr, 20 Structures
pdb|1QLK|A Chain A, Solution Structure Of Ca(2+)-Loaded Rat S100b (Betabeta)
Nmr, 20 Structures
pdb|1QLK|B Chain B, Solution Structure Of Ca(2+)-Loaded Rat S100b (Betabeta)
Nmr, 20 Structures
pdb|1B4C|A Chain A, Solution Structure Of Rat Apo-S100b Using Dipolar
Couplings
pdb|1B4C|B Chain B, Solution Structure Of Rat Apo-S100b Using Dipolar
Couplings
pdb|1DT7|A Chain A, Solution Structure Of The C-Terminal Negative Regulatory
Domain Of P53 In A Complex With Ca2+-Bound S100b(Bb)
pdb|1DT7|B Chain B, Solution Structure Of The C-Terminal Negative Regulatory
Domain Of P53 In A Complex With Ca2+-Bound S100b(Bb)
pdb|1MWN|A Chain A, Solution Nmr Structure Of S100b Bound To The
High-Affinity Target Peptide Trtk-12
pdb|1MWN|B Chain B, Solution Nmr Structure Of S100b Bound To The
High-Affinity Target Peptide Trtk-12
pdb|1XYD|A Chain A, Nmr Solution Structure Of Rat Zinc-Calcium-S100b, 20
Structures
pdb|1XYD|B Chain B, Nmr Solution Structure Of Rat Zinc-Calcium-S100b, 20
Structures
Length = 92
Score = 33.9 bits (76), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 11/79 (13%)
Query: 13 YNNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGKFNNTQWIQELFQSIDQNGDGSL 72
Y+ G+ L K+ + N E FL + + + ++ +++D++GDG
Sbjct: 18 YSGREGDKHKLKKSELKELINN--------ELSHFLEEIKEQEVVDKVMETLDEDGDGEC 69
Query: 73 DFVEFLTPFYFVSNWRVKC 91
DF EF+ FVS C
Sbjct: 70 DFQEFMA---FVSMVTTAC 85
>pdb|2K7O|A Chain A, Ca2+-s100b, Refined With Rdcs
pdb|2K7O|B Chain B, Ca2+-s100b, Refined With Rdcs
Length = 91
Score = 33.9 bits (76), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 11/79 (13%)
Query: 13 YNNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGKFNNTQWIQELFQSIDQNGDGSL 72
Y+ G+ L K+ + N E FL + + + ++ +++D++GDG
Sbjct: 17 YSGREGDKHKLKKSELKELINN--------ELSHFLEEIKEQEVVDKVMETLDEDGDGEC 68
Query: 73 DFVEFLTPFYFVSNWRVKC 91
DF EF+ FVS C
Sbjct: 69 DFQEFMA---FVSMVTTAC 84
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 33.5 bits (75), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 24 AKNFFNSMDTNGDGRISRSEFLQFLGKFN---NTQWIQELFQSIDQNGDGSLDFVEFLT 79
AK F D N DG++S EF + F+ + I + F+ ID +G+G L+ EF +
Sbjct: 3 AKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTS 61
>pdb|2JXL|A Chain A, Solution Structure Of Cardiac N-Domain Troponin C Mutant
F77w-V82a
Length = 89
Score = 33.5 bits (75), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 36 DGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
DG IS E ++ LG+ + +QE+ +D++G G++DF E+L
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEWLV 79
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 33.5 bits (75), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 37 GRISRSEFLQFLGKFNN---TQWIQELFQSIDQNGDGSLDFVEFLTPFYFV 84
G + EF +F +N TQ+++ +F++ D NGD ++DF+E++ V
Sbjct: 38 GTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLV 88
>pdb|3RLZ|A Chain A, 2.0 Angstrom X-Ray Structure Of Bovine Ca(2+)-S100b D63n
pdb|3RLZ|B Chain B, 2.0 Angstrom X-Ray Structure Of Bovine Ca(2+)-S100b D63n
pdb|3RM1|A Chain A, 1.24 Angstrom X-Ray Structure Of Bovine
Trtk12-Ca(2+)-S100b D63n
Length = 92
Score = 33.5 bits (75), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 11/79 (13%)
Query: 13 YNNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGKFNNTQWIQELFQSIDQNGDGSL 72
Y+ G+ L K+ + N E FL + + + ++ +++D NGDG
Sbjct: 18 YSGREGDKHKLKKSELKELINN--------ELSHFLEEIKEQEVVDKVMETLDSNGDGEC 69
Query: 73 DFVEFLTPFYFVSNWRVKC 91
DF EF+ FV+ C
Sbjct: 70 DFQEFMA---FVAMITTAC 85
>pdb|2KGB|C Chain C, Nmr Solution Of The Regulatory Domain Cardiac
F77w-Troponin C In Complex With The Cardiac Troponin I
144-163 Switch Peptide
Length = 89
Score = 33.5 bits (75), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 36 DGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
DG IS E ++ LG+ + +QE+ +D++G G++DF E+L
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEWLV 79
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 33.1 bits (74), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F+ D +G G IS E ++ LG+ + + +D++G G++DF EFL
Sbjct: 23 KAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGTIDFEEFLV 80
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 33.1 bits (74), Expect = 0.037, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Query: 4 EFHDSAIICYNNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLG--KFNNTQWIQELF 61
E+ + +C + + + FN DT+ G+I++ E G + W ++
Sbjct: 417 EYSEFISVCMDKQILFSEERLRRAFNLFDTDKSGKITKEELANLFGLTSISEKTW-NDVL 475
Query: 62 QSIDQNGDGSLDFVEFLT 79
DQN D +DF EF++
Sbjct: 476 GEADQNKDNMIDFDEFVS 493
Score = 29.3 bits (64), Expect = 0.54, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 34/65 (52%), Gaps = 11/65 (16%)
Query: 26 NFFNSMDTNGDGRISRSEFLQF----------LGKFNNT-QWIQELFQSIDQNGDGSLDF 74
+ F +D NGDG++ + E ++ LG+ N + + + + +D + +G +++
Sbjct: 359 DIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEY 418
Query: 75 VEFLT 79
EF++
Sbjct: 419 SEFIS 423
Score = 28.1 bits (61), Expect = 1.4, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 21/32 (65%)
Query: 57 IQELFQSIDQNGDGSLDFVEFLTPFYFVSNWR 88
+ ++F+ +D+NGDG LD E + + + N++
Sbjct: 357 LTDIFKKLDKNGDGQLDKKELIEGYNVLRNFK 388
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 33.1 bits (74), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F+ D +GDG I+ E + LG +Q+ +D +G+G+++F EFLT
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGTINFPEFLT 70
Score = 29.3 bits (64), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEFLQF---LGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
+ F D +G+G IS +E LG+ + + E + D +GDG +++ EF+
Sbjct: 86 REAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYEEFV 142
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 32.7 bits (73), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 8/58 (13%)
Query: 28 FNSMDTNGDGRISRSEFLQFL----GKFNNTQW----IQELFQSIDQNGDGSLDFVEF 77
F D + DG I+ +E L K N TQ ++ + + +D+N DG +DF EF
Sbjct: 128 FRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEF 185
Score = 26.9 bits (58), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Query: 9 AIICYNNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGK--FNNTQWIQELFQSIDQ 66
II + +V+ L F +D +G G I++ + + L K L ID
Sbjct: 40 TIIAQQSNDYDVEKLKSTFL-VLDEDGKGYITKEQLKKGLEKDGLKLPYNFDLLLDQIDS 98
Query: 67 NGDGSLDFVEFLTP 80
+G G +D+ EF+
Sbjct: 99 DGSGKIDYTEFIAA 112
>pdb|1BOD|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 74
Score = 32.7 bits (73), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 11/61 (18%)
Query: 25 KNFFNSMDTNGDGRIS--------RSEFLQFLGKFNNTQWIQELFQSIDQNGDGSLDFVE 76
K F D GDG++S ++EF L + ELF+ +D+NGDG + F E
Sbjct: 8 KGIFEKYDKEGDGQLSKEELKLLLQTEFPSLL---KGMSTLDELFEELDKNGDGEVSFEE 64
Query: 77 F 77
F
Sbjct: 65 F 65
>pdb|1NYA|A Chain A, Nmr Solution Structure Of Calerythrin, An Ef-hand Calcium-
Binding Protein
Length = 176
Score = 32.7 bits (73), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 35/85 (41%), Gaps = 4/85 (4%)
Query: 12 CYNNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGKFNNTQW-IQELFQSIDQNGDG 70
+N G V K D N DG+I+ EF +L ++ E F +D NG+G
Sbjct: 95 SFNRVLGPV---VKGIVGMCDKNADGQINADEFAAWLTALGMSKAEAAEAFNQVDTNGNG 151
Query: 71 SLDFVEFLTPFYFVSNWRVKCDGLG 95
L E LT R+ + LG
Sbjct: 152 ELSLDELLTAVRDFHFGRLDVELLG 176
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 32.7 bits (73), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F D +GDG I+ E ++ L + + +Q++ +D +G+G+++F EFL+
Sbjct: 13 KEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLS 70
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 32.7 bits (73), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F D +GDG I+ E ++ L + + +Q++ +D +G+G+++F EFL+
Sbjct: 13 KEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLS 70
>pdb|1M31|A Chain A, Three-Dimensional Solution Structure Of Apo-Mts1
pdb|1M31|B Chain B, Three-Dimensional Solution Structure Of Apo-Mts1
pdb|2Q91|A Chain A, Structure Of The Ca2+-Bound Activated Form Of The S100a4
Metastasis Factor
pdb|2Q91|B Chain B, Structure Of The Ca2+-Bound Activated Form Of The S100a4
Metastasis Factor
pdb|3CGA|A Chain A, Crystal Structure Of Metastasis-Associated Protein S100a4
In The Active, Calcium-Bound Form
pdb|3CGA|B Chain B, Crystal Structure Of Metastasis-Associated Protein S100a4
In The Active, Calcium-Bound Form
pdb|3KO0|A Chain A, Structure Of The Tfp-Ca2+-Bound Activated Form Of The
S100a4 Metastasis Factor
pdb|3KO0|B Chain B, Structure Of The Tfp-Ca2+-Bound Activated Form Of The
S100a4 Metastasis Factor
pdb|3KO0|C Chain C, Structure Of The Tfp-Ca2+-Bound Activated Form Of The
S100a4 Metastasis Factor
pdb|3KO0|D Chain D, Structure Of The Tfp-Ca2+-Bound Activated Form Of The
S100a4 Metastasis Factor
pdb|3KO0|E Chain E, Structure Of The Tfp-Ca2+-Bound Activated Form Of The
S100a4 Metastasis Factor
pdb|3KO0|F Chain F, Structure Of The Tfp-Ca2+-Bound Activated Form Of The
S100a4 Metastasis Factor
pdb|3KO0|G Chain G, Structure Of The Tfp-Ca2+-Bound Activated Form Of The
S100a4 Metastasis Factor
pdb|3KO0|H Chain H, Structure Of The Tfp-Ca2+-Bound Activated Form Of The
S100a4 Metastasis Factor
pdb|3KO0|I Chain I, Structure Of The Tfp-Ca2+-Bound Activated Form Of The
S100a4 Metastasis Factor
pdb|3KO0|J Chain J, Structure Of The Tfp-Ca2+-Bound Activated Form Of The
S100a4 Metastasis Factor
pdb|3KO0|K Chain K, Structure Of The Tfp-Ca2+-Bound Activated Form Of The
S100a4 Metastasis Factor
pdb|3KO0|L Chain L, Structure Of The Tfp-Ca2+-Bound Activated Form Of The
S100a4 Metastasis Factor
pdb|3KO0|M Chain M, Structure Of The Tfp-Ca2+-Bound Activated Form Of The
S100a4 Metastasis Factor
pdb|3KO0|N Chain N, Structure Of The Tfp-Ca2+-Bound Activated Form Of The
S100a4 Metastasis Factor
pdb|3KO0|O Chain O, Structure Of The Tfp-Ca2+-Bound Activated Form Of The
S100a4 Metastasis Factor
pdb|3KO0|P Chain P, Structure Of The Tfp-Ca2+-Bound Activated Form Of The
S100a4 Metastasis Factor
pdb|3KO0|Q Chain Q, Structure Of The Tfp-Ca2+-Bound Activated Form Of The
S100a4 Metastasis Factor
pdb|3KO0|R Chain R, Structure Of The Tfp-Ca2+-Bound Activated Form Of The
S100a4 Metastasis Factor
pdb|3KO0|S Chain S, Structure Of The Tfp-Ca2+-Bound Activated Form Of The
S100a4 Metastasis Factor
pdb|3KO0|T Chain T, Structure Of The Tfp-Ca2+-Bound Activated Form Of The
S100a4 Metastasis Factor
Length = 101
Score = 32.3 bits (72), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 8/60 (13%)
Query: 43 EFLQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLTPFYFVSNWRVKCDGLGCNTWLQG 102
E FLGK + Q+L ++D N D +DF E+ F+S C + CN + +G
Sbjct: 41 ELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCV---FLS-----CIAMMCNEFFEG 92
>pdb|3M0W|A Chain A, Structure Of S100a4 With Pcp
pdb|3M0W|B Chain B, Structure Of S100a4 With Pcp
pdb|3M0W|C Chain C, Structure Of S100a4 With Pcp
pdb|3M0W|D Chain D, Structure Of S100a4 With Pcp
pdb|3M0W|E Chain E, Structure Of S100a4 With Pcp
pdb|3M0W|F Chain F, Structure Of S100a4 With Pcp
pdb|3M0W|G Chain G, Structure Of S100a4 With Pcp
pdb|3M0W|H Chain H, Structure Of S100a4 With Pcp
pdb|3M0W|I Chain I, Structure Of S100a4 With Pcp
pdb|3M0W|J Chain J, Structure Of S100a4 With Pcp
Length = 100
Score = 32.3 bits (72), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 8/60 (13%)
Query: 43 EFLQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLTPFYFVSNWRVKCDGLGCNTWLQG 102
E FLGK + Q+L ++D N D +DF E+ F+S C + CN + +G
Sbjct: 40 ELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCV---FLS-----CIAMMCNEFFEG 91
>pdb|1K2H|A Chain A, Three-Dimensional Solution Structure Of Apo-S100a1.
pdb|1K2H|B Chain B, Three-Dimensional Solution Structure Of Apo-S100a1.
pdb|1ZFS|A Chain A, Solution Structure Of S100a1 Bound To Calcium
pdb|1ZFS|B Chain B, Solution Structure Of S100a1 Bound To Calcium
pdb|2K2F|A Chain A, Solution Structure Of Ca2+-S100a1-Ryrp12
pdb|2K2F|B Chain B, Solution Structure Of Ca2+-S100a1-Ryrp12
pdb|2KBM|A Chain A, Ca-S100a1 Interacting With Trtk12
pdb|2KBM|B Chain B, Ca-S100a1 Interacting With Trtk12
Length = 93
Score = 32.3 bits (72), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 41 RSEFLQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLTPFYFVSNWRVKC 91
++E FL + + ++ + +D+NGDG +DF EF+ V+ V C
Sbjct: 38 QTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVV---LVAALTVAC 85
>pdb|3C1V|A Chain A, The 1.5 A Crystal Structure Of Ca2+-Bound S100a4
pdb|3C1V|B Chain B, The 1.5 A Crystal Structure Of Ca2+-Bound S100a4
pdb|3C1V|C Chain C, The 1.5 A Crystal Structure Of Ca2+-Bound S100a4
pdb|3C1V|D Chain D, The 1.5 A Crystal Structure Of Ca2+-Bound S100a4
pdb|2LNK|A Chain A, Solution Structure Of Ca-Bound S100a4 In Complex With
Non-Muscle Myosin Iia
pdb|2LNK|B Chain B, Solution Structure Of Ca-Bound S100a4 In Complex With
Non-Muscle Myosin Iia
Length = 113
Score = 32.3 bits (72), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 8/60 (13%)
Query: 43 EFLQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLTPFYFVSNWRVKCDGLGCNTWLQG 102
E FLGK + Q+L ++D N D +DF E+ F+S C + CN + +G
Sbjct: 53 ELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCV---FLS-----CIAMMCNEFFEG 104
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 32.0 bits (71), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
K F D +GDG I+ E ++ L + + +Q++ +D +G+G+++F EFL+
Sbjct: 13 KEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLS 70
Score = 29.6 bits (65), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 25 KNFFNSMDTNGDGRISRSEFLQF---LGKFNNTQWIQELFQSIDQNGDGSLDFVEFLTPF 81
K F D + +G IS SE LG+ + ++++ + D +GDG +++ EF+
Sbjct: 86 KEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMM 145
Query: 82 YFV 84
V
Sbjct: 146 MTV 148
>pdb|1CFP|A Chain A, S100b (S100beta) Nmr Data Was Collected From A Sample Of
Calcium Free Protein At Ph 6.3 And A Temperature Of 311
K And 1.7-6.9 Mm Concentration, 25 Structures
pdb|1CFP|B Chain B, S100b (S100beta) Nmr Data Was Collected From A Sample Of
Calcium Free Protein At Ph 6.3 And A Temperature Of 311
K And 1.7-6.9 Mm Concentration, 25 Structures
pdb|3CR2|A Chain A, X-ray Structure Of Bovine Zn(2+),ca(2+)-s100b
pdb|3CR5|X Chain X, X-Ray Structure Of Bovine Pnt-Zn(2+),Ca(2+)-S100b
pdb|3CR4|X Chain X, X-Ray Structure Of Bovine Pnt,Ca(2+)-S100b
pdb|3GK1|A Chain A, X-Ray Structure Of Bovine Sbi132,Ca(2+)-S100b
pdb|3GK2|A Chain A, X-Ray Structure Of Bovine Sbi279,Ca(2+)-S100b
pdb|3GK4|X Chain X, X-Ray Structure Of Bovine Sbi523,Ca(2+)-S100b
pdb|3IQO|A Chain A, 1.5 Angstrom X-ray Structure Of Bovine Ca(2+)-s100b
pdb|3IQO|B Chain B, 1.5 Angstrom X-ray Structure Of Bovine Ca(2+)-s100b
pdb|3IQQ|A Chain A, X-Ray Structure Of Bovine Trtk12-Ca(2+)-S100b
pdb|3LLE|A Chain A, X-Ray Structure Of Bovine Sc0322,Ca(2+)-S100b
pdb|3LLE|B Chain B, X-Ray Structure Of Bovine Sc0322,Ca(2+)-S100b
Length = 92
Score = 32.0 bits (71), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 11/79 (13%)
Query: 13 YNNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGKFNNTQWIQELFQSIDQNGDGSL 72
Y+ G+ L K+ + N E FL + + + ++ +++D +GDG
Sbjct: 18 YSGREGDKHKLKKSELKELINN--------ELSHFLEEIKEQEVVDKVMETLDSDGDGEC 69
Query: 73 DFVEFLTPFYFVSNWRVKC 91
DF EF+ FV+ C
Sbjct: 70 DFQEFMA---FVAMITTAC 85
>pdb|1PSB|A Chain A, Solution Structure Of Calcium Loaded S100b Complexed To
A Peptide From N-Terminal Regulatory Domain Of Ndr
Kinase.
pdb|1PSB|B Chain B, Solution Structure Of Calcium Loaded S100b Complexed To
A Peptide From N-Terminal Regulatory Domain Of Ndr
Kinase
Length = 91
Score = 32.0 bits (71), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 11/79 (13%)
Query: 13 YNNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGKFNNTQWIQELFQSIDQNGDGSL 72
Y+ G+ L K+ + N E FL + + + ++ +++D +GDG
Sbjct: 17 YSGREGDKHKLKKSELKELINN--------ELSHFLEEIKEQEVVDKVMETLDSDGDGEC 68
Query: 73 DFVEFLTPFYFVSNWRVKC 91
DF EF+ FV+ C
Sbjct: 69 DFQEFMA---FVAMITTAC 84
>pdb|4ETO|A Chain A, Structure Of S100a4 In Complex With Non-Muscle Myosin-Iia
Peptide
pdb|4ETO|B Chain B, Structure Of S100a4 In Complex With Non-Muscle Myosin-Iia
Peptide
pdb|4HSZ|A Chain A, Structure Of Truncated (delta8c) S100a4
pdb|4HSZ|B Chain B, Structure Of Truncated (delta8c) S100a4
pdb|4HSZ|C Chain C, Structure Of Truncated (delta8c) S100a4
pdb|4HSZ|D Chain D, Structure Of Truncated (delta8c) S100a4
Length = 93
Score = 32.0 bits (71), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 8/60 (13%)
Query: 43 EFLQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLTPFYFVSNWRVKCDGLGCNTWLQG 102
E FLGK + Q+L ++D N D +DF E+ F+S C + CN + +G
Sbjct: 41 ELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCV---FLS-----CIAMMCNEFFEG 92
>pdb|1MHO|A Chain A, The 2.0 A Structure Of Holo S100b From Bovine Brain
Length = 88
Score = 32.0 bits (71), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 11/79 (13%)
Query: 13 YNNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGKFNNTQWIQELFQSIDQNGDGSL 72
Y+ G+ L K+ + N E FL + + + ++ +++D +GDG
Sbjct: 17 YSGREGDKHKLKKSELKELINN--------ELSHFLEEIKEQEVVDKVMETLDSDGDGEC 68
Query: 73 DFVEFLTPFYFVSNWRVKC 91
DF EF+ FV+ C
Sbjct: 69 DFQEFMA---FVAMITTAC 84
>pdb|1QX2|A Chain A, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A
Conformational Opening) At 1.44 A Resolution
pdb|1QX2|B Chain B, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A
Conformational Opening) At 1.44 A Resolution
Length = 76
Score = 32.0 bits (71), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Query: 38 RISRSEF---LQFLGK--FNNTQWIQELFQSIDQNGDGSLDFVEFLTPFYFVSN 86
+IS+ E +Q LG + E+ + +D+NGDG + F EFL +S
Sbjct: 23 QISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKKISQ 76
>pdb|3RV5|A Chain A, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|B Chain B, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|C Chain C, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|D Chain D, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
Length = 89
Score = 32.0 bits (71), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 36 DGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
DG IS E + LG+ + +QE +D++G G++DF EFL
Sbjct: 33 DGCISTKELGKVXRXLGQNPTPEELQEXIDEVDEDGSGTVDFDEFLV 79
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 32.0 bits (71), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 10/71 (14%)
Query: 18 GEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGKF------NNTQWIQE----LFQSIDQN 67
G+V + +F D +G+G I R E L + N +E +F ID N
Sbjct: 84 GKVDQKLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKIDIN 143
Query: 68 GDGSLDFVEFL 78
GDG L EF+
Sbjct: 144 GDGELSLEEFM 154
Score = 26.2 bits (56), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 28 FNSMDTNGDGRISRSEFLQFLGK 50
F+ +D NGDG +S EF++ + K
Sbjct: 137 FDKIDINGDGELSLEEFMEGVQK 159
>pdb|4FQO|A Chain A, Crystal Structure Of Calcium-loaded S100b Bound To
Sbi4211
Length = 89
Score = 32.0 bits (71), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 11/79 (13%)
Query: 13 YNNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGKFNNTQWIQELFQSIDQNGDGSL 72
Y+ G+ L K+ + N E FL + + + ++ +++D +GDG
Sbjct: 18 YSGREGDKHKLKKSELKELINN--------ELSHFLEEIKEQEVVDKVMETLDSDGDGEC 69
Query: 73 DFVEFLTPFYFVSNWRVKC 91
DF EF+ FV+ C
Sbjct: 70 DFQEFMA---FVAMITTAC 85
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 32.0 bits (71), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 26 NFFNSMDTNGDGRISRSEFLQFLG---KFNNT-QWIQELFQSIDQNGDGSLDFVEF 77
+ N +D +G+ +I SEFL + K N++ Q + E F+ D+NGDG + E
Sbjct: 50 DLMNEIDVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAEL 105
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 32.0 bits (71), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 26 NFFNSMDTNGDGRISRSEFLQFLG---KFNNT-QWIQELFQSIDQNGDGSLDFVEF 77
+ N +D +G+ +I SEFL + K N++ Q + E F+ D+NGDG + E
Sbjct: 51 DLMNEIDVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAEL 106
>pdb|3LK0|A Chain A, X-Ray Structure Of Bovine Sc0067,Ca(2+)-S100b
pdb|3LK0|B Chain B, X-Ray Structure Of Bovine Sc0067,Ca(2+)-S100b
pdb|3LK0|C Chain C, X-Ray Structure Of Bovine Sc0067,Ca(2+)-S100b
pdb|3LK0|D Chain D, X-Ray Structure Of Bovine Sc0067,Ca(2+)-S100b
pdb|3LK1|A Chain A, X-Ray Structure Of Bovine Sc0322,Ca(2+)-S100b
Length = 90
Score = 32.0 bits (71), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 11/79 (13%)
Query: 13 YNNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGKFNNTQWIQELFQSIDQNGDGSL 72
Y+ G+ L K+ + N E FL + + + ++ +++D +GDG
Sbjct: 18 YSGREGDKHKLKKSELKELINN--------ELSHFLEEIKEQEVVDKVMETLDSDGDGEC 69
Query: 73 DFVEFLTPFYFVSNWRVKC 91
DF EF+ FV+ C
Sbjct: 70 DFQEFMA---FVAMITTAC 85
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 32.0 bits (71), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 26 NFFNSMDTNGDGRISRSEFLQFLG---KFNNT-QWIQELFQSIDQNGDGSLDFVEF 77
+ N +D +G+ +I SEFL + K N++ Q + E F+ D+NGDG + E
Sbjct: 50 DLMNEIDVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAEL 105
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 28 FNSMDTNGDGRISRSEFLQFLGKFN-NTQWIQELFQSIDQNGDGSLDFVEFLT 79
F D +G G I+ E Q +F I+EL + +DQ+ DG +D+ EF+
Sbjct: 105 FTYFDKDGSGYITPDELQQACEEFGVEDVRIEELXRDVDQDNDGRIDYNEFVA 157
Score = 29.6 bits (65), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 10 IICYNNATGEVQNLAKNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQ 66
+I + + E+ L K FN +D + G+I+ E L+ +G I +L Q+ D
Sbjct: 16 VIAESLSEEEIAGL-KEXFNXIDADKSGQITFEELKAGLKRVGANLKESEILDLXQAADV 74
Query: 67 NGDGSLDFVEFLTP 80
+ G++D+ EF+
Sbjct: 75 DNSGTIDYKEFIAA 88
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Query: 26 NFFNSMDTNGDGRISRSEFLQFLGKF----NNTQWIQELFQSIDQNGDGSLDFVEF 77
+ N +D +G+ I SEFL + + ++ Q + E F+ D+NGDG + E
Sbjct: 51 DLMNEIDVDGNHAIEFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAEL 106
>pdb|1J55|A Chain A, The Crystal Structure Of Ca+-Bound Human S100p
Determined At 2.0a Resolution By X-Ray
Length = 95
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 31/79 (39%), Gaps = 11/79 (13%)
Query: 13 YNNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGKFNNTQWIQELFQSIDQNGDGSL 72
Y+ + G Q L K + E FL + + +L + +D NGD +
Sbjct: 18 YSGSEGSTQTLTKGELKVL--------MEKELPGFLQSGKDKDAVDKLLKDLDANGDAQV 69
Query: 73 DFVEFLTPFYFVSNWRVKC 91
DF EF+ FV+ C
Sbjct: 70 DFSEFIV---FVAAITSAC 85
>pdb|1MQ1|A Chain A, Ca2+-S100b-Trtk-12 Complex
pdb|1MQ1|B Chain B, Ca2+-S100b-Trtk-12 Complex
pdb|1UWO|A Chain A, Calcium Form Of Human S100b, Nmr, 20 Structures
pdb|1UWO|B Chain B, Calcium Form Of Human S100b, Nmr, 20 Structures
pdb|2PRU|A Chain A, Nmr Structure Of Human Apos100b At 10c
pdb|2PRU|B Chain B, Nmr Structure Of Human Apos100b At 10c
Length = 91
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 11/79 (13%)
Query: 13 YNNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGKFNNTQWIQELFQSIDQNGDGSL 72
Y+ G+ L K+ + N E FL + + + ++ +++D +GDG
Sbjct: 17 YSGREGDKHKLKKSELKELINN--------ELSHFLEEIKEQEVVDKVMETLDNDGDGEC 68
Query: 73 DFVEFLTPFYFVSNWRVKC 91
DF EF+ FV+ C
Sbjct: 69 DFQEFMA---FVAMVTTAC 84
>pdb|2H61|C Chain C, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|D Chain D, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|G Chain G, X-ray Structure Of Human Ca2+-loaded S100b
pdb|3D0Y|A Chain A, Crystal Structure Of S100b In The Calcium And Zinc
Loaded State At Ph 6.5
Length = 92
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 11/79 (13%)
Query: 13 YNNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGKFNNTQWIQELFQSIDQNGDGSL 72
Y+ G+ L K+ + N E FL + + + ++ +++D +GDG
Sbjct: 18 YSGREGDKHKLKKSELKELINN--------ELSHFLEEIKEQEVVDKVMETLDNDGDGEC 69
Query: 73 DFVEFLTPFYFVSNWRVKC 91
DF EF+ FV+ C
Sbjct: 70 DFQEFMA---FVAMVTTAC 85
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Query: 28 FNSMDTNGDGRISRSEF---LQFLGKFNNTQW-IQELFQSIDQNGDGSLDFVEFL 78
F D NGDG I EF +Q +G+ T ++E + D++G+G +D EF+
Sbjct: 14 FKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFM 68
>pdb|2E6W|A Chain A, Solution Structure And Calcium Binding Properties Of Ef-
Hands 3 And 4 Of Calsenilin
Length = 100
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 15/76 (19%)
Query: 18 GEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGKFNN---------------TQWIQELFQ 62
G V K FN D N DG I++ E L + + + ++ F+
Sbjct: 5 GTVHEKLKWAFNLYDINKDGYITKEEMLAIMKSIYDMMGRHTYPILREDAPAEHVERFFE 64
Query: 63 SIDQNGDGSLDFVEFL 78
+D+N DG + EFL
Sbjct: 65 KMDRNQDGVVTIEEFL 80
Score = 29.6 bits (65), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 24 AKNFFNSMDTNGDGRISRSEFLQFLGKFNNTQWIQELFQSI 64
+ FF MD N DG ++ EFL+ K N +LF+++
Sbjct: 59 VERFFEKMDRNQDGVVTIEEFLEACQKDENIMSSMQLFENV 99
>pdb|2H61|A Chain A, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|B Chain B, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|E Chain E, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|F Chain F, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|H Chain H, X-ray Structure Of Human Ca2+-loaded S100b
pdb|3CZT|X Chain X, Crystal Structure Of S100b In The Calcium And Zinc
Loaded State At Ph 9
pdb|3D0Y|B Chain B, Crystal Structure Of S100b In The Calcium And Zinc
Loaded State At Ph 6.5
pdb|3D10|A Chain A, Crystal Structure Of S100b In The Calcium And Zinc
Loaded State At Ph 10.0
pdb|3D10|B Chain B, Crystal Structure Of S100b In The Calcium And Zinc
Loaded State At Ph 10.0
pdb|3HCM|A Chain A, Crystal Structure Of Human S100b In Complex With S45
pdb|3HCM|B Chain B, Crystal Structure Of Human S100b In Complex With S45
Length = 92
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 11/79 (13%)
Query: 13 YNNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGKFNNTQWIQELFQSIDQNGDGSL 72
Y+ G+ L K+ + N E FL + + + ++ +++D +GDG
Sbjct: 18 YSGREGDKHKLKKSELKELINN--------ELSHFLEEIKEQEVVDKVMETLDNDGDGEC 69
Query: 73 DFVEFLTPFYFVSNWRVKC 91
DF EF+ FV+ C
Sbjct: 70 DFQEFMA---FVAMVTTAC 85
>pdb|1NSH|A Chain A, Solution Structure Of Rabbit Apo-S100a11 (19 Models)
pdb|1NSH|B Chain B, Solution Structure Of Rabbit Apo-S100a11 (19 Models)
Length = 101
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 8/48 (16%)
Query: 39 ISRSEFLQF----LGKFNNTQ----WIQELFQSIDQNGDGSLDFVEFL 78
+S++EFL F L F Q + + + +D N DG LDF EFL
Sbjct: 30 LSKTEFLSFMNTELAAFTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFL 77
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 17 TGEVQNLAKNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLD 73
T E + + F+ D +G G I E ++ LG + I+++ ID+ G G ++
Sbjct: 26 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMN 85
Query: 74 FVEFLT 79
F +FLT
Sbjct: 86 FGDFLT 91
>pdb|2L0P|A Chain A, Solution Structure Of Human Apo-S100a1 Protein By Nmr
Spectroscopy
pdb|2L0P|B Chain B, Solution Structure Of Human Apo-S100a1 Protein By Nmr
Spectroscopy
Length = 94
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 38 RISRSEFLQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLTPFYFVSNWRVKC 91
+ ++E FL + + ++ + +D+NGDG +DF E++ V+ V C
Sbjct: 36 ELLQTELSGFLDAQKDVDAVDKVMKELDENGDGEVDFQEYVV---LVAALTVAC 86
>pdb|2LLU|A Chain A, Post-Translational S-Nitrosylation Is An Endogenous
Factor Fine-Tuning Human S100a1 Protein Properties
pdb|2LLU|B Chain B, Post-Translational S-Nitrosylation Is An Endogenous
Factor Fine-Tuning Human S100a1 Protein Properties
pdb|2LP2|A Chain A, Solution Structure And Dynamics Of Human S100a1 Protein
Modified At Cysteine 85 With Homocysteine Disulfide
Bond Formation In Calcium Saturated Form
pdb|2LP2|B Chain B, Solution Structure And Dynamics Of Human S100a1 Protein
Modified At Cysteine 85 With Homocysteine Disulfide
Bond Formation In Calcium Saturated Form
pdb|2LP3|A Chain A, Solution Structure Of S100a1 Ca2+
pdb|2LP3|B Chain B, Solution Structure Of S100a1 Ca2+
Length = 93
Score = 30.8 bits (68), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 38 RISRSEFLQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLTPFYFVSNWRVKC 91
+ ++E FL + + ++ + +D+NGDG +DF E++ V+ V C
Sbjct: 35 ELLQTELSGFLDAQKDVDAVDKVMKELDENGDGEVDFQEYVV---LVAALTVAC 85
>pdb|2LHL|A Chain A, Chemical Shift Assignments And Solution Structure Of
Human Apo-S100a1 E32q Mutant
pdb|2LHL|B Chain B, Chemical Shift Assignments And Solution Structure Of
Human Apo-S100a1 E32q Mutant
Length = 93
Score = 30.8 bits (68), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 38 RISRSEFLQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLTPFYFVSNWRVKC 91
+ ++E FL + + ++ + +D+NGDG +DF E++ V+ V C
Sbjct: 35 ELLQTELSGFLDAQKDVDAVDKVMKELDENGDGEVDFQEYVV---LVAALTVAC 85
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal
Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal
Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In
Calcium-Calmodulin: Solution Structure Of Halothane-Cam
C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe
Bound With Er Alpha Peptide
Length = 67
Score = 30.8 bits (68), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEFLQF---LGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
+ F D +G+G IS +E LG+ + + E+ + D +GDG +++ EF+
Sbjct: 5 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 61
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 30.8 bits (68), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEFLQF---LGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
+ F D +G+G IS +E LG+ + + E+ + D +GDG +++ EF+
Sbjct: 8 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 64
>pdb|1YX7|A Chain A, Nmr Structure Of Calsensin, Energy Minimized Average
Structure.
pdb|1YX8|A Chain A, Nmr Structure Of Calsensin, 20 Low Energy Structures
Length = 83
Score = 30.8 bits (68), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 9/60 (15%)
Query: 28 FNSMDTNGDGRISRSEFLQF---------LGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
F +D NGDG ++ E F L K + +L + D+N DG + EFL
Sbjct: 13 FKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKISKEEFL 72
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 30.8 bits (68), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Query: 20 VQNLAKNFFNSMDTNGDGRISRSEFLQFLGKFNNT---QWIQELFQSIDQNGDGSLDFVE 76
+Q + F D G+G IS + L + + T + + + ID +G G++DF E
Sbjct: 1 MQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEE 60
Query: 77 FL 78
F+
Sbjct: 61 FM 62
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 15/76 (19%)
Query: 18 GEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGKFNNT---------------QWIQELFQ 62
G VQ FN D N DG I++ E L + + Q ++ FQ
Sbjct: 134 GTVQEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQ 193
Query: 63 SIDQNGDGSLDFVEFL 78
+D+N DG + EF+
Sbjct: 194 KMDKNKDGVVTIDEFI 209
Score = 28.9 bits (63), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 22/41 (53%)
Query: 24 AKNFFNSMDTNGDGRISRSEFLQFLGKFNNTQWIQELFQSI 64
+ FF MD N DG ++ EF++ K N +LF+++
Sbjct: 188 VETFFQKMDKNKDGVVTIDEFIESCQKDENIMRSMQLFENV 228
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 25 KNFFNSMDTNGDGRISRSEFLQFLGK----FNNTQWIQELFQSIDQNGDGSLDFVEF 77
++ N +D +G+G I EFL + + ++ + I+E F+ D++G+G + E
Sbjct: 4 QDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAEL 60
Score = 29.3 bits (64), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 18/23 (78%)
Query: 57 IQELFQSIDQNGDGSLDFVEFLT 79
+Q++ +D +G+G++DF EFLT
Sbjct: 3 LQDMINEVDADGNGTIDFPEFLT 25
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From
Calmodulin To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEFLQF---LGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
+ F D +G+G IS +E LG+ + + E+ + D +GDG +++ EF+
Sbjct: 9 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 65
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin
Carboxy-Terminal Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEFLQF---LGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
+ F D +G+G IS +E LG+ + + E+ + D +GDG +++ EF+
Sbjct: 11 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 67
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of
Bordetella Pertussis In Presence Of C-Terminal
Calmodulin And 1mm Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of
Bordetella Pertussis In Presence Of C-Terminal
Calmodulin
Length = 74
Score = 30.8 bits (68), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEFLQF---LGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
+ F D +G+G IS +E LG+ + + E+ + D +GDG +++ EF+
Sbjct: 12 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 68
>pdb|3NXA|A Chain A, X-Ray Structure Of The Apo Form Of Human S100a16
pdb|3NXA|B Chain B, X-Ray Structure Of The Apo Form Of Human S100a16
pdb|3NXA|C Chain C, X-Ray Structure Of The Apo Form Of Human S100a16
pdb|3NXA|D Chain D, X-Ray Structure Of The Apo Form Of Human S100a16
Length = 100
Score = 30.8 bits (68), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 10/78 (12%)
Query: 12 CYNNATGEVQNLAKNFFNSMDTNG--DGRISRSEFLQFLGK--------FNNTQWIQELF 61
CY V L +NF+ + +IS+S F + L K N + +L
Sbjct: 2 CYTELEKAVIVLVENFYKYVSKYSLVKNKISKSSFREMLQKELNHMLSDTGNRKAADKLI 61
Query: 62 QSIDQNGDGSLDFVEFLT 79
Q++D N DG + F E+ T
Sbjct: 62 QNLDANHDGRISFDEYWT 79
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With
Pyrophosphate
Length = 67
Score = 30.4 bits (67), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEFLQF---LGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
+ F D +G+G IS +E LG+ + + E+ + D +GDG +++ EF+
Sbjct: 8 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 64
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 30.4 bits (67), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 15/76 (19%)
Query: 18 GEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGKFNNT---------------QWIQELFQ 62
G V K FN D N DG I++ E L + + + ++ FQ
Sbjct: 161 GTVHEKLKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQ 220
Query: 63 SIDQNGDGSLDFVEFL 78
+D+N DG + EFL
Sbjct: 221 KMDRNQDGVVTIDEFL 236
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 24 AKNFFNSMDTNGDGRISRSEFLQFLGKFNNTQWIQELFQSI 64
+ FF MD N DG ++ EFL+ K N +LF+++
Sbjct: 215 VERFFQKMDRNQDGVVTIDEFLETCQKDENIMNSMQLFENV 255
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 30.4 bits (67), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEFLQF---LGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
+ F D +G+G IS +E LG+ + + E+ + D +GDG +++ EF+
Sbjct: 32 REAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 88
>pdb|2L50|A Chain A, Solution Structure Of Apo S100a16
pdb|2L50|B Chain B, Solution Structure Of Apo S100a16
pdb|2L51|A Chain A, Solution Structure Of Calcium Bound S100a16
pdb|2L51|B Chain B, Solution Structure Of Calcium Bound S100a16
Length = 102
Score = 30.4 bits (67), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 10/78 (12%)
Query: 12 CYNNATGEVQNLAKNFFNSMDTNG--DGRISRSEFLQFLGK--------FNNTQWIQELF 61
CY V L +NF+ + +IS+S F + L K N + +L
Sbjct: 3 CYTELEKAVIVLVENFYKYVSKYSLVKNKISKSSFREMLQKELNHMLSDTGNRKAADKLI 62
Query: 62 QSIDQNGDGSLDFVEFLT 79
Q++D N DG + F E+ T
Sbjct: 63 QNLDANHDGRISFDEYWT 80
>pdb|1OZO|A Chain A, Three-Dimensional Solution Structure Of Apo-S100p
Protein Determined By Nmr Spectroscopy
pdb|1OZO|B Chain B, Three-Dimensional Solution Structure Of Apo-S100p
Protein Determined By Nmr Spectroscopy
Length = 95
Score = 30.4 bits (67), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 8/67 (11%)
Query: 13 YNNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGKFNNTQWIQELFQSIDQNGDGSL 72
Y+ + G Q L K + E FL + + +L + +D NGD +
Sbjct: 18 YSGSEGSTQTLTKGELKVL--------MEKELPGFLQSGKDKDAVDKLLKDLDANGDAQV 69
Query: 73 DFVEFLT 79
DF EF+
Sbjct: 70 DFSEFIV 76
Score = 25.4 bits (54), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 9/38 (23%), Positives = 19/38 (50%)
Query: 17 TGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGKFNNT 54
+G+ ++ +D NGD ++ SEF+ F+ +
Sbjct: 47 SGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAAITSA 84
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 30.4 bits (67), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Query: 10 IICYNNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQF----LGKFNNTQWIQELFQSID 65
I+ + + + F D +GDG IS +E L+F LG+ + I E+ + D
Sbjct: 71 IMAKQMRETDTEEEMREAFKIFDRDGDGFISPAE-LRFVMINLGEKVTDEEIDEMIREAD 129
Query: 66 QNGDGSLDFVEFL 78
+GDG +++ EF+
Sbjct: 130 FDGDGMINYEEFV 142
Score = 28.9 bits (63), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEF 77
K+ F D G G+I+ E ++ LG+ +Q+L + N +G L+F EF
Sbjct: 13 KDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEF 68
>pdb|2CT9|A Chain A, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
pdb|2CT9|B Chain B, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
Length = 208
Score = 30.4 bits (67), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 8/59 (13%)
Query: 28 FNSMDTNGDGRISRSEFLQFLGKFNNTQWIQELFQSI--------DQNGDGSLDFVEFL 78
F D + D +ISR E LQ L E SI DQ+GD ++ F EF+
Sbjct: 119 FRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFV 177
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 30.4 bits (67), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 15/76 (19%)
Query: 18 GEVQNLAKNFFNSMDTNGDGRISRSEFLQ-------FLGKFN--------NTQWIQELFQ 62
G V + FN D N DG I++ E + +GK+ Q + FQ
Sbjct: 121 GTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQ 180
Query: 63 SIDQNGDGSLDFVEFL 78
+D+N DG + EFL
Sbjct: 181 KMDKNKDGIVTLDEFL 196
Score = 28.9 bits (63), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 27 FFNSMDTNGDGRISRSEFLQFLGKFNNTQWIQELFQSI 64
FF MD N DG ++ EFL+ + +N +LFQ++
Sbjct: 178 FFQKMDKNKDGIVTLDEFLESCQEDDNIMRSLQLFQNV 215
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 30.4 bits (67), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 15/76 (19%)
Query: 18 GEVQNLAKNFFNSMDTNGDGRISRSEFLQ-------FLGKFN--------NTQWIQELFQ 62
G V + FN D N DG I++ E + +GK+ Q + FQ
Sbjct: 85 GTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQ 144
Query: 63 SIDQNGDGSLDFVEFL 78
+D+N DG + EFL
Sbjct: 145 KMDKNKDGIVTLDEFL 160
Score = 28.9 bits (63), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 27 FFNSMDTNGDGRISRSEFLQFLGKFNNTQWIQELFQSI 64
FF MD N DG ++ EFL+ + +N +LFQ++
Sbjct: 142 FFQKMDKNKDGIVTLDEFLESCQEDDNIMRSLQLFQNV 179
>pdb|3CS1|A Chain A, Flagellar Calcium-binding Protein (fcabp) From T. Cruzi
Length = 219
Score = 30.0 bits (66), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 7/71 (9%)
Query: 27 FFNSMDTNGDGRISRSEFLQFLGKFN----NTQWIQELFQSIDQNGDGSLDFVEFLTPFY 82
F+ +D +G+ + EF + + K + LF+ +D+NG GS+ F EF
Sbjct: 135 MFDEIDASGNMLVDEEEFKRAVPKLEAWGAKVEDPAALFKELDKNGTGSVTFDEFAA--- 191
Query: 83 FVSNWRVKCDG 93
+ S ++ DG
Sbjct: 192 WASAVKLDADG 202
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 30.0 bits (66), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 19 EVQNLAKNFFNSMDTNGDGRISRSEFLQFLGKFNNT---QWIQELFQSIDQNGDGSLDFV 75
++Q + F D G+G IS + L + + T + + + ID +G G++DF
Sbjct: 88 QMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFE 147
Query: 76 EFL 78
EF+
Sbjct: 148 EFM 150
Score = 25.8 bits (55), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 11/71 (15%)
Query: 18 GEVQNLAKNFFNSMDT--------NGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQ 66
G+V L+ N ++T G GR+S + L+ LG I++L D
Sbjct: 2 GDVSKLSSNQVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDP 61
Query: 67 NGDGSLDFVEF 77
G+G +DF F
Sbjct: 62 FGNGDIDFDSF 72
>pdb|2E30|A Chain A, Solution Structure Of The Cytoplasmic Region Of Na+H+
Exchanger 1 Complexed With Essential Cofactor
Calcineurin B Homologous Protein 1
Length = 195
Score = 30.0 bits (66), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 8/59 (13%)
Query: 28 FNSMDTNGDGRISRSEFLQFLGKFNNTQWIQELFQSI--------DQNGDGSLDFVEFL 78
F D + D +ISR E LQ L E SI DQ+GD ++ F EF+
Sbjct: 119 FRLYDLDKDEKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFV 177
>pdb|1QLS|A Chain A, S100c (S100a11),Or Calgizzarin, In Complex With Annexin
I N-Terminus
Length = 99
Score = 30.0 bits (66), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 8/49 (16%)
Query: 38 RISRSEFLQF----LGKFNNTQW----IQELFQSIDQNGDGSLDFVEFL 78
+IS++EFL F L F Q + + + +D + DG LDF EFL
Sbjct: 31 KISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFL 79
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 30.0 bits (66), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 15/66 (22%)
Query: 28 FNSMDTNGDGRISRSEFLQ-------FLGKFN--------NTQWIQELFQSIDQNGDGSL 72
FN D N DG I++ E + +GK+ Q + FQ +D+N DG +
Sbjct: 98 FNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIV 157
Query: 73 DFVEFL 78
EFL
Sbjct: 158 TLDEFL 163
Score = 28.9 bits (63), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 27 FFNSMDTNGDGRISRSEFLQFLGKFNNTQWIQELFQSI 64
FF MD N DG ++ EFL+ + +N +LFQ++
Sbjct: 145 FFQKMDKNKDGIVTLDEFLESXQEDDNIMRSLQLFQNV 182
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 30.0 bits (66), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 25 KNFFNSMDTNGDGRISRSEFLQF---LGKFNNTQWIQELFQSIDQNGDGSLDFVEFLTPF 81
K F D + +G IS SE LG+ + ++++ + D +GDG +++ EF+
Sbjct: 7 KEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMM 66
Query: 82 YFV 84
V
Sbjct: 67 MTV 69
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 30.0 bits (66), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 17 TGEVQNLAKNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLD 73
T E + + F+ D +G G I E ++ LG + I+++ ID+ G G ++
Sbjct: 1 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMN 60
Query: 74 FVEFLT 79
F +FLT
Sbjct: 61 FGDFLT 66
>pdb|1CB1|A Chain A, Three-Dimensional Solution Structure Of Ca2+-Loaded
Porcine Calbindin D9k Determined By Nuclear Magnetic
Resonance Spectroscopy
Length = 78
Score = 30.0 bits (66), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 6/51 (11%)
Query: 33 TNGDG-RISRSEFLQ-----FLGKFNNTQWIQELFQSIDQNGDGSLDFVEF 77
GD ++S+ E Q F + + +LFQ +D+NGDG + F EF
Sbjct: 19 KEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEF 69
Score = 25.8 bits (55), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 26 NFFNSMDTNGDGRISRSEFLQFLGKFNN 53
+ F +D NGDG +S EF + K +
Sbjct: 51 DLFQELDKNGDGEVSFEEFQVLVKKISQ 78
>pdb|3L6A|A Chain A, Crystal Structure Of The C-Terminal Region Of Human P97
Length = 364
Score = 29.6 bits (65), Expect = 0.42, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 16/52 (30%)
Query: 45 LQFLGKFNNTQWIQELFQS-----------IDQNGDGSLDFVE-----FLTP 80
LQ L K + +W+ ELFQ IDQN D L+ +E FL P
Sbjct: 145 LQQLAKLQDREWLTELFQQSKVNMQKMLPEIDQNKDRMLEILEGKGLSFLFP 196
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 29.6 bits (65), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 25 KNFFNSMDTNGDGRISRSEFLQF---LGKFNNTQWIQELFQSIDQNGDGSLDFVEFLTPF 81
K F D + +G IS SE LG+ + ++++ + D +GDG +++ EF+
Sbjct: 12 KEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMM 71
Query: 82 YFV 84
V
Sbjct: 72 MTV 74
>pdb|2JPT|A Chain A, Structural Changes Induced In Apo-s100a1 Protein By The
Disulphide Formation Between Its Cys85 Residue And B-
Mercaptoethanol
pdb|2JPT|B Chain B, Structural Changes Induced In Apo-s100a1 Protein By The
Disulphide Formation Between Its Cys85 Residue And B-
Mercaptoethanol
Length = 93
Score = 29.6 bits (65), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 13/54 (24%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 38 RISRSEFLQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLTPFYFVSNWRVKC 91
+ ++E FL + + ++ + +D++GDG +DF E++ V+ V C
Sbjct: 35 ELLQTELSGFLDAQKDADAVDKVMKELDEDGDGEVDFQEYVV---LVAALTVAC 85
>pdb|2LLS|A Chain A, Solution Structure Of Human Apo-S100a1 C85m
pdb|2LLS|B Chain B, Solution Structure Of Human Apo-S100a1 C85m
Length = 93
Score = 29.6 bits (65), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 11/42 (26%), Positives = 24/42 (57%)
Query: 38 RISRSEFLQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
+ ++E FL + + ++ + +D+NGDG +DF E++
Sbjct: 35 ELLQTELSGFLDAQKDVDAVDKVMKELDENGDGEVDFQEYVV 76
>pdb|2LLT|A Chain A, Post-Translational S-Nitrosylation Is An Endogenous
Factor Fine-Tuning Human S100a1 Protein Properties
pdb|2LLT|B Chain B, Post-Translational S-Nitrosylation Is An Endogenous
Factor Fine-Tuning Human S100a1 Protein Properties
Length = 93
Score = 29.6 bits (65), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 11/42 (26%), Positives = 24/42 (57%)
Query: 38 RISRSEFLQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
+ ++E FL + + ++ + +D+NGDG +DF E++
Sbjct: 35 ELLQTELSGFLDAQKDVDAVDKVMKELDENGDGEVDFQEYVV 76
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 29.6 bits (65), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 28 FNSMDTNGDGRISRSEFLQFLGKFNNTQWIQEL---FQSIDQNGDGSLDFVEFLTPFYFV 84
+N+ DTN DG + EF+ + + Q+L F+ D +G+GS+D E L F V
Sbjct: 63 YNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYFKLYDADGNGSIDKNELLDMFMAV 122
Score = 28.5 bits (62), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 35/90 (38%), Gaps = 23/90 (25%)
Query: 27 FFNSMDTNGDGRISRSEFLQFL---------GKFNNTQWIQELFQSIDQNGDGSLDFVEF 77
+F D +G+G I ++E L + ++I +F ID N DG L EF
Sbjct: 98 YFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGELTLEEF 157
Query: 78 L--------------TPFYFVSNWRVKCDG 93
+ F F + RV C+G
Sbjct: 158 INGMAKDQDLLEIVYKSFDFSNVLRVICNG 187
>pdb|1E8A|A Chain A, The Three-Dimensional Structure Of Human S100a12
pdb|1E8A|B Chain B, The Three-Dimensional Structure Of Human S100a12
pdb|1GQM|A Chain A, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|B Chain B, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|C Chain C, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|D Chain D, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|E Chain E, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|F Chain F, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|G Chain G, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|H Chain H, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|I Chain I, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|J Chain J, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|K Chain K, The Structure Of S100a12 In A Hexameric Form
pdb|1GQM|L Chain L, The Structure Of S100a12 In A Hexameric Form
Length = 91
Score = 29.6 bits (65), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 8/49 (16%)
Query: 39 ISRSEFLQFLGK--------FNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
+S+ E Q L K + I E+FQ +D N D +DF EF++
Sbjct: 27 LSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFIS 75
>pdb|4ICB|A Chain A, Proline Cis-Trans Isomers In Calbindin D9k Observed By
X- Ray Crystallography
Length = 76
Score = 29.6 bits (65), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 46 QFLGKFNNTQWIQELFQSIDQNGDGSLDFVEF 77
+F + ELF+ +D+NGDG + F EF
Sbjct: 36 EFPSLLKGPSTLDELFEELDKNGDGEVSFEEF 67
>pdb|2WCE|A Chain A, Calcium-Free (Apo) S100a12
pdb|2WCE|B Chain B, Calcium-Free (Apo) S100a12
Length = 95
Score = 29.6 bits (65), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 8/49 (16%)
Query: 39 ISRSEFLQFLGK--------FNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
+S+ E Q L K + I E+FQ +D N D +DF EF++
Sbjct: 31 LSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFIS 79
>pdb|1ODB|A Chain A, The Crystal Structure Of Human S100a12 - Copper Complex
pdb|1ODB|B Chain B, The Crystal Structure Of Human S100a12 - Copper Complex
pdb|1ODB|C Chain C, The Crystal Structure Of Human S100a12 - Copper Complex
pdb|1ODB|D Chain D, The Crystal Structure Of Human S100a12 - Copper Complex
pdb|1ODB|E Chain E, The Crystal Structure Of Human S100a12 - Copper Complex
pdb|1ODB|F Chain F, The Crystal Structure Of Human S100a12 - Copper Complex
pdb|2WC8|A Chain A, S100a12 Complex With Zinc In The Absence Of Calcium
pdb|2WC8|B Chain B, S100a12 Complex With Zinc In The Absence Of Calcium
pdb|2WC8|C Chain C, S100a12 Complex With Zinc In The Absence Of Calcium
pdb|2WC8|D Chain D, S100a12 Complex With Zinc In The Absence Of Calcium
pdb|2WCB|A Chain A, S100a12 Complex With Zinc In The Absence Of Calcium
pdb|2WCB|B Chain B, S100a12 Complex With Zinc In The Absence Of Calcium
pdb|2WCF|A Chain A, Calcium-Free (Apo) S100a12
pdb|2WCF|B Chain B, Calcium-Free (Apo) S100a12
pdb|2WCF|C Chain C, Calcium-Free (Apo) S100a12
pdb|2WCF|D Chain D, Calcium-Free (Apo) S100a12
pdb|2WCF|E Chain E, Calcium-Free (Apo) S100a12
pdb|2WCF|F Chain F, Calcium-Free (Apo) S100a12
Length = 95
Score = 29.3 bits (64), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 8/49 (16%)
Query: 39 ISRSEFLQFLGK--------FNNTQWIQELFQSIDQNGDGSLDFVEFLT 79
+S+ E Q L K + I E+FQ +D N D +DF EF++
Sbjct: 31 LSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFIS 79
>pdb|1IG5|A Chain A, Bovine Calbindin D9k Binding Mg2+
pdb|1IGV|A Chain A, Bovine Calbindin D9k Binding Mn2+
pdb|3ICB|A Chain A, The Refined Structure Of Vitamin D-Dependent Calcium-
Binding Protein From Bovine Intestine. Molecular
Details, Ion Binding, And Implications For The
Structure Of Other Calcium-Binding Proteins
Length = 75
Score = 29.3 bits (64), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 46 QFLGKFNNTQWIQELFQSIDQNGDGSLDFVEF 77
+F + ELF+ +D+NGDG + F EF
Sbjct: 35 EFPSLLKGPSTLDELFEELDKNGDGEVSFEEF 66
>pdb|3AKA|A Chain A, Structural Basis For Prokaryotic Calcium-Mediated
Regulation By A Streptomyces Coelicolor Calcium-Binding
Protein
Length = 166
Score = 29.3 bits (64), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 12/50 (24%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Query: 7 DSAIICYNNAT-----GEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGKF 51
D A+ + A G ++LA+ ++DT+GDG++ +E + ++
Sbjct: 112 DGAVTVADTARALTAFGVPEDLARQAAAALDTDGDGKVGETEIVPAFARY 161
>pdb|3AKB|A Chain A, Structural Basis For Prokaryotic Calcium-Mediated
Regulation By A Streptomyces Coelicolor Calcium-Binding
Protein
Length = 166
Score = 29.3 bits (64), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 12/50 (24%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Query: 7 DSAIICYNNAT-----GEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGKF 51
D A+ + A G ++LA+ ++DT+GDG++ +E + ++
Sbjct: 112 DGAVTVADTARALTAFGVPEDLARQAAAALDTDGDGKVGETEIVPAFARY 161
>pdb|1KSM|A Chain A, Average Nmr Solution Structure Of Ca Ln Calbindin D9k
pdb|1KQV|A Chain A, Family Of Nmr Solution Structures Of Ca Ln Calbindin D9k
Length = 79
Score = 29.3 bits (64), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 16/21 (76%)
Query: 57 IQELFQSIDQNGDGSLDFVEF 77
+ ELF+ +D+NGDG + F EF
Sbjct: 50 LDELFEELDKNGDGEVSFEEF 70
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin
Bound To The Iq Motif Of Nav1.2
Length = 73
Score = 29.3 bits (64), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 28 FNSMDTNGDGRISRSEFLQF---LGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
F D +G+G IS +E LG+ + E+ + D +GDG +++ EF+
Sbjct: 14 FKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFV 67
>pdb|1HT9|A Chain A, Domain Swapping Ef-Hands
pdb|1HT9|B Chain B, Domain Swapping Ef-Hands
Length = 76
Score = 29.3 bits (64), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 16/21 (76%)
Query: 57 IQELFQSIDQNGDGSLDFVEF 77
+ ELF+ +D+NGDG + F EF
Sbjct: 47 LDELFEELDKNGDGEVSFEEF 67
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 29.3 bits (64), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 6/101 (5%)
Query: 9 AIICYNNATGEVQNLAKNFFNSMDTNGDGRISRSEFLQFLGKFN-NTQWIQELFQSIDQN 67
A + N +NL + F+ D +G G I+ E Q F + I ++ + IDQ+
Sbjct: 70 AATVHLNKLEREENLV-SAFSYFDKDGSGYITLDEIQQACKDFGLDDIHIDDMIKEIDQD 128
Query: 68 GDGSLDFVEFLTPFYFVSNWRVKCDGLGCNTWLQGLYFTCA 108
DG +D+ EF R G+G T + L A
Sbjct: 129 NDGQIDYGEFAAMM----RKRKGNGGIGRRTMRKTLNLRDA 165
Score = 26.2 bits (56), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLTP 80
K F +DT+ G I+ E L+ +G I++L + D + G++D+ EF+
Sbjct: 13 KELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAA 71
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 28.9 bits (63), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 30/76 (39%), Gaps = 15/76 (19%)
Query: 18 GEVQNLAKNFFNSMDTNGDGRISRSEFLQF---------------LGKFNNTQWIQELFQ 62
G V + FN D N DG I++ E + L + Q + FQ
Sbjct: 85 GTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGAYTYPVLAEDTPRQHVDVFFQ 144
Query: 63 SIDQNGDGSLDFVEFL 78
+D+N DG + EFL
Sbjct: 145 KMDKNKDGIVTLDEFL 160
Score = 28.9 bits (63), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 27 FFNSMDTNGDGRISRSEFLQFLGKFNNTQWIQELFQSI 64
FF MD N DG ++ EFL+ + +N +LFQ++
Sbjct: 142 FFQKMDKNKDGIVTLDEFLESCQEDDNIMRSLQLFQNV 179
>pdb|1KCY|A Chain A, Nmr Solution Structure Of Apo Calbindin D9k (F36g + P43m
Mutant)
Length = 75
Score = 28.9 bits (63), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 16/21 (76%)
Query: 57 IQELFQSIDQNGDGSLDFVEF 77
+ ELF+ +D+NGDG + F EF
Sbjct: 46 LDELFEELDKNGDGEVSFEEF 66
>pdb|1N65|A Chain A, Family Of Nmr Solution Structures Of Ca Ce Calbindin D9k
In Denaturating Conditions
Length = 75
Score = 28.9 bits (63), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 16/21 (76%)
Query: 57 IQELFQSIDQNGDGSLDFVEF 77
+ ELF+ +D+NGDG + F EF
Sbjct: 46 LDELFEELDKNGDGEVSFEEF 66
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 28.9 bits (63), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 17/31 (54%)
Query: 18 GEVQNLAKNFFNSMDTNGDGRISRSEFLQFL 48
G+ A FN D N DGRI SEF+Q L
Sbjct: 59 GDPTKFATFVFNVFDENKDGRIEFSEFIQAL 89
Score = 25.8 bits (55), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 15/65 (23%)
Query: 28 FNSMDTNGDGRISRSEFLQF-------------LGKFNNT--QWIQELFQSIDQNGDGSL 72
F D + DG I+R+E L L + NT + + +F +D+N DG L
Sbjct: 105 FKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKL 164
Query: 73 DFVEF 77
EF
Sbjct: 165 TLQEF 169
>pdb|1CDN|A Chain A, Solution Structure Of (Cd2+)1-Calbindin D9k Reveals
Details Of The Stepwise Structural Changes Along The
Apo--> (Ca2+) Ii1--> (Ca2+)i,Ii2 Binding Pathway
pdb|1CLB|A Chain A, Determination Of The Solution Structure Of Apo Calbindin
D9k By Nmr Spectroscopy
pdb|2BCA|A Chain A, High-Resolution Solution Structure Of Calcium-Loaded
Calbindin D9k
Length = 76
Score = 28.9 bits (63), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 16/21 (76%)
Query: 57 IQELFQSIDQNGDGSLDFVEF 77
+ ELF+ +D+NGDG + F EF
Sbjct: 47 LDELFEELDKNGDGEVSFEEF 67
>pdb|2BCB|A Chain A, High-Resolution Solution Structure Of Calcium-Loaded
Calbindin D9k
pdb|1B1G|A Chain A, Solvated Refinement Of Ca-Loaded Calbindin D9k
Length = 75
Score = 28.9 bits (63), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 16/21 (76%)
Query: 57 IQELFQSIDQNGDGSLDFVEF 77
+ ELF+ +D+NGDG + F EF
Sbjct: 46 LDELFEELDKNGDGEVSFEEF 66
>pdb|1Y1X|A Chain A, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
pdb|1Y1X|B Chain B, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
Length = 191
Score = 28.9 bits (63), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Query: 28 FNSMDTNGDGRISRSEFLQFL---GKFNNTQWIQELFQSIDQNGDGSLDFVEFLTPFYFV 84
F D++GDGR+ +E L G + Q Q L + D+ GSL F +++ FV
Sbjct: 99 FRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVELSIFV 158
Query: 85 SNWR 88
R
Sbjct: 159 CRVR 162
Score = 28.9 bits (63), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Query: 28 FNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLTPFYFV 84
F ++DT+G G IS E L G + ++L D+N G + F EF +F+
Sbjct: 33 FRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFKDLHHFI 92
Query: 85 SNWR 88
+ R
Sbjct: 93 LSMR 96
>pdb|1BOC|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 76
Score = 28.9 bits (63), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 16/21 (76%)
Query: 57 IQELFQSIDQNGDGSLDFVEF 77
+ ELF+ +D+NGDG + F EF
Sbjct: 47 LDELFEELDKNGDGEVSFEEF 67
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 28.9 bits (63), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Query: 25 KNFFNSMDTNGDGRISRSEFLQF---LGKFNNTQWIQELFQSIDQNGDGSL---DFVEFL 78
+ F D +G+G IS ++ LG+ + + E+ + D +GDG + DFV+ +
Sbjct: 10 REAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEDFVQMM 69
Query: 79 TP 80
T
Sbjct: 70 TA 71
>pdb|2HPK|A Chain A, Crystal Structure Of Photoprotein Berovin From Beroe
Abyssicola
Length = 208
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 21 QNLAKNFFNSMDTNGDGRISRSEFLQFLGKF 51
Q A FF DT+ G++ R+E + KF
Sbjct: 161 QEAAYTFFEKADTDKSGKLERTELVHLFRKF 191
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Query: 28 FNSMDTNGDGRISRSEFLQFLGK----FNNTQWIQELFQSIDQNGDG 70
FN D G+G+I EFL +G+ + +++ F++ D G G
Sbjct: 48 FNEADATGNGKIQFPEFLSMMGRRMKQTTSEDILRQAFRTFDPEGTG 94
>pdb|1IRJ|A Chain A, Crystal Structure Of The Mrp14 Complexed With Chaps
pdb|1IRJ|B Chain B, Crystal Structure Of The Mrp14 Complexed With Chaps
pdb|1IRJ|C Chain C, Crystal Structure Of The Mrp14 Complexed With Chaps
pdb|1IRJ|D Chain D, Crystal Structure Of The Mrp14 Complexed With Chaps
pdb|1IRJ|E Chain E, Crystal Structure Of The Mrp14 Complexed With Chaps
pdb|1IRJ|F Chain F, Crystal Structure Of The Mrp14 Complexed With Chaps
pdb|1IRJ|G Chain G, Crystal Structure Of The Mrp14 Complexed With Chaps
pdb|1IRJ|H Chain H, Crystal Structure Of The Mrp14 Complexed With Chaps
Length = 113
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 39 ISRSEFLQFLGKFN-NTQWIQELFQSIDQNGDGSLDFVEFL 78
+ R + FL K N N + I+ + + +D N D L F EF+
Sbjct: 39 LVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFI 79
>pdb|4GGF|C Chain C, Crystal Structure Of Mn2+ Bound Calprotectin
pdb|4GGF|L Chain L, Crystal Structure Of Mn2+ Bound Calprotectin
pdb|4GGF|T Chain T, Crystal Structure Of Mn2+ Bound Calprotectin
pdb|4GGF|V Chain V, Crystal Structure Of Mn2+ Bound Calprotectin
Length = 114
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 39 ISRSEFLQFLGKFN-NTQWIQELFQSIDQNGDGSLDFVEFL 78
+ R + FL K N N + I+ + + +D N D L F EF+
Sbjct: 40 LVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFI 80
>pdb|1XK4|C Chain C, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|D Chain D, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|G Chain G, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|H Chain H, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|K Chain K, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|L Chain L, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
Length = 113
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 39 ISRSEFLQFLGKFN-NTQWIQELFQSIDQNGDGSLDFVEFL 78
+ R + FL K N N + I+ + + +D N D L F EF+
Sbjct: 39 LVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFI 79
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEFLQF---LGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
K F D + +G IS +E LG+ + + E+ + D +GDG +++ EF+
Sbjct: 7 KEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 63
>pdb|3VLU|A Chain A, Crystal Structure Of Sphingomonas Sp. A1 Alginate-Binding
Protein Algq1 In Complex With Saturated Trimannuronate
pdb|3VLV|A Chain A, Crystal Structure Of Sphingomonas Sp. A1 Alginate-Binding
Ptotein Algq1 In Complex With Unsaturated Triguluronate
pdb|3VLW|A Chain A, Crystal Structure Of Sphingomonas Sp. A1 Alginate-Binding
Protein Algq1 In Complex With Mannuronate-Guluronate
Disaccharide
pdb|3VLW|B Chain B, Crystal Structure Of Sphingomonas Sp. A1 Alginate-Binding
Protein Algq1 In Complex With Mannuronate-Guluronate
Disaccharide
Length = 502
Score = 27.7 bits (60), Expect = 1.5, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 17/80 (21%)
Query: 36 DGRISRSEFLQ--FLGKFN--NTQWIQEL------FQSIDQNGDGSLDFVEFLTP----- 80
DG +SR F++ +L K + Q + EL F+ D NG+G D + F+
Sbjct: 132 DGLVSRGYFIRQDWLDKLHLKTPQTVDELYTVLKAFKEKDPNGNGKADEIPFINRDPEEV 191
Query: 81 FYFVSNWRVKCDGLGCNTWL 100
F V+ W + G NTW+
Sbjct: 192 FRLVNFWGAR--STGSNTWM 209
>pdb|1Y3N|A Chain A, Structure Of Algq1, Alginate-binding Protein, Complexed
With An Alginate Disaccharide
pdb|1Y3P|A Chain A, Structure Of Algq1, Alginate-Binding Protein, Complexed
With An Alginate Tetrasaccharide
pdb|1Y3Q|A Chain A, Structure Of Algq1, Alginate-Binding Protein
pdb|3A09|A Chain A, Crystal Structure Of Sphingomonas Sp. A1 Alginate-Binding
Protein Algq1 In Complex With Unsaturated Trimannuronate
Length = 490
Score = 27.7 bits (60), Expect = 1.8, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 17/80 (21%)
Query: 36 DGRISRSEFLQ--FLGKFN--NTQWIQEL------FQSIDQNGDGSLDFVEFLTP----- 80
DG +SR F++ +L K + Q + EL F+ D NG+G D + F+
Sbjct: 132 DGLVSRGYFIRQDWLDKLHLKTPQTVDELYTVLKAFKEKDPNGNGKADEIPFINRDPEEV 191
Query: 81 FYFVSNWRVKCDGLGCNTWL 100
F V+ W + G NTW+
Sbjct: 192 FRLVNFWGAR--STGSNTWM 209
>pdb|3ZWH|A Chain A, Ca2+-Bound S100a4 C3s, C81s, C86s And F45w Mutant
Complexed With Myosin Iia
pdb|3ZWH|B Chain B, Ca2+-Bound S100a4 C3s, C81s, C86s And F45w Mutant
Complexed With Myosin Iia
Length = 104
Score = 27.3 bits (59), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Query: 43 EFLQFLGKFNNTQWIQELFQSIDQNGDGSLDFVE---FLTPFYFVSN 86
E +LGK + Q+L ++D N D +DF E FL+ +SN
Sbjct: 44 ELPSWLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSSIAMMSN 90
>pdb|1IJ5|A Chain A, Metal-Free Structure Of Multidomain Ef-Hand Protein,
Cbp40, From True Slime Mold
pdb|1IJ6|A Chain A, Ca2+-Bound Structure Of Multidomain Ef-Hand Protein,
Cbp40, From True Slime Mold
Length = 323
Score = 27.3 bits (59), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 28 FNSMDTNGDGRISRSEFLQFLGK--FNNTQWIQELFQSIDQNGDGSLDFVEFL 78
F +DTN +G +SR EF + + F+ LF+ D++ + F E++
Sbjct: 194 FRKIDTNSNGTLSRKEFREHFVRLGFDKKSVQDALFRYADEDESDDVGFSEYV 246
>pdb|4DUQ|A Chain A, The Structure Of Ca2+-Loaded S100a2 At 1.3a Resolution
pdb|4DUQ|B Chain B, The Structure Of Ca2+-Loaded S100a2 At 1.3a Resolution
Length = 98
Score = 26.9 bits (58), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 22/37 (59%)
Query: 41 RSEFLQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEF 77
E F+G+ + + +++L S+D+N D +DF E+
Sbjct: 40 HKELPSFVGEKVDEEGLKKLMGSLDENSDQQVDFQEY 76
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium
Regulatory Domain (Cld) From Soybean Calcium-Dependent
Protein Kinase- Alpha (Cdpk)
Length = 87
Score = 26.9 bits (58), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 25 KNFFNSMDTNGDGRISRSEF---LQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLTP 80
K F +DT+ G I+ E L+ +G I++L + D + G++D+ EF+
Sbjct: 26 KELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAA 84
>pdb|2LVV|A Chain A, Nmr Structure Of Tb24
Length = 226
Score = 26.9 bits (58), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 8/57 (14%)
Query: 27 FFNSMDTNGDGRISRSEFLQFLGKFNNTQW------IQELFQSIDQNGDGSLDFVEF 77
F++MD +G + EF + L K +W +F ID NG G + F EF
Sbjct: 138 MFDTMDKDGSLLLELQEFKEALPKLK--EWGVDITDATTVFNEIDTNGSGVVTFDEF 192
>pdb|2HPS|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri
Length = 186
Score = 26.9 bits (58), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 28 FNSMDTNGDGRISRSEFLQFLGKF 51
FN++D N +G+ISR EFL + F
Sbjct: 144 FNTLDFNKNGQISRDEFLVTVNDF 167
>pdb|2HQ8|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
pdb|2HQ8|B Chain B, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
Length = 186
Score = 26.6 bits (57), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 28 FNSMDTNGDGRISRSEFLQFLGKF 51
FN++D N +G+ISR EFL + F
Sbjct: 144 FNTLDFNKNGQISRDEFLVTVNDF 167
>pdb|1PON|B Chain B, Site Iii-Site Iv Troponin C Heterodimer, Nmr
Length = 36
Score = 26.6 bits (57), Expect = 3.5, Method: Composition-based stats.
Identities = 11/22 (50%), Positives = 16/22 (72%)
Query: 57 IQELFQSIDQNGDGSLDFVEFL 78
I++L + D+N DG +DF EFL
Sbjct: 7 IEDLMKDSDKNNDGRIDFDEFL 28
>pdb|2RGI|A Chain A, Crystal Structure Of Ca2+-Free S100a2 At 1.6 A
Resolution
pdb|2RGI|B Chain B, Crystal Structure Of Ca2+-Free S100a2 At 1.6 A
Resolution
Length = 98
Score = 26.6 bits (57), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 22/37 (59%)
Query: 41 RSEFLQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEF 77
E F+G+ + + +++L S+D+N D +DF E+
Sbjct: 40 HKELPSFVGEKVDEEGLKKLMGSLDENSDQQVDFQEY 76
>pdb|1MR8|A Chain A, Migration Inhibitory Factor-Related Protein 8 From Human
pdb|1MR8|B Chain B, Migration Inhibitory Factor-Related Protein 8 From Human
Length = 93
Score = 26.6 bits (57), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 22 NLAKNFFNSMDTNGDGRISRSEFLQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
+L K F+++ + ++ +E Q++ K W F+ +D N DG+++F EFL
Sbjct: 20 SLIKGNFHAVYRDDLKKLLETECPQYIRKKGADVW----FKELDINTDGAVNFQEFL 72
>pdb|1XK4|A Chain A, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|B Chain B, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|E Chain E, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|F Chain F, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|I Chain I, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|1XK4|J Chain J, Crystal Structure Of Human Calprotectin(s100a8/s100a9)
pdb|4GGF|A Chain A, Crystal Structure Of Mn2+ Bound Calprotectin
pdb|4GGF|K Chain K, Crystal Structure Of Mn2+ Bound Calprotectin
pdb|4GGF|S Chain S, Crystal Structure Of Mn2+ Bound Calprotectin
pdb|4GGF|U Chain U, Crystal Structure Of Mn2+ Bound Calprotectin
Length = 93
Score = 26.6 bits (57), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 22 NLAKNFFNSMDTNGDGRISRSEFLQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFL 78
+L K F+++ + ++ +E Q++ K W F+ +D N DG+++F EFL
Sbjct: 20 SLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVW----FKELDINTDGAVNFQEFL 72
>pdb|1D1O|A Chain A, Cooperativity In Ef-Hand Ca2+-Binding Proteins: Evidence
Of Site-Site Communication From Binding-Induced Changes
In Structure And Dynamics Of N56a Calbindin D9k
Length = 75
Score = 26.6 bits (57), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 57 IQELFQSIDQNGDGSLDFVEF 77
+ ELF+ +D+ GDG + F EF
Sbjct: 46 LDELFEELDKAGDGEVSFEEF 66
>pdb|3A8R|A Chain A, The Structure Of The N-Terminal Regulatory Domain Of A
Plant Nadph Oxidase
pdb|3A8R|B Chain B, The Structure Of The N-Terminal Regulatory Domain Of A
Plant Nadph Oxidase
Length = 179
Score = 26.6 bits (57), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 10/45 (22%), Positives = 23/45 (51%)
Query: 22 NLAKNFFNSMDTNGDGRISRSEFLQFLGKFNNTQWIQELFQSIDQ 66
N + FF+ +D N DGR++ E + + + + ++ + D+
Sbjct: 98 NRLRTFFDMVDKNADGRLTAEEVKEIIALSASANKLSKIKERADE 142
>pdb|2KAX|A Chain A, Solution Structure And Dynamics Of S100a5 In The Apo And
Ca2+ -Bound States
pdb|2KAX|B Chain B, Solution Structure And Dynamics Of S100a5 In The Apo And
Ca2+ -Bound States
pdb|2KAY|A Chain A, Solution Structure And Dynamics Of S100a5 In The Ca2+
-Bound States
pdb|2KAY|B Chain B, Solution Structure And Dynamics Of S100a5 In The Ca2+
-Bound States
pdb|4DIR|A Chain A, 2.6 Angstrom X-ray Structure Of Human Ca(2+)-s100a5
pdb|4DIR|B Chain B, 2.6 Angstrom X-ray Structure Of Human Ca(2+)-s100a5
Length = 92
Score = 26.6 bits (57), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 7/45 (15%)
Query: 39 ISRSEFLQF------LGKFNNTQWIQELFQSIDQNGDGSLDFVEF 77
+SR E + LG+ + I +L +S+D+N D +DF E+
Sbjct: 29 LSRKELKELIKKELCLGEMKESS-IDDLMKSLDKNSDQEIDFKEY 72
>pdb|2Y5I|A Chain A, S100z From Zebrafish In Complex With Calcium
pdb|2Y5I|B Chain B, S100z From Zebrafish In Complex With Calcium
pdb|2Y5I|C Chain C, S100z From Zebrafish In Complex With Calcium
pdb|2Y5I|D Chain D, S100z From Zebrafish In Complex With Calcium
pdb|2Y5I|E Chain E, S100z From Zebrafish In Complex With Calcium
pdb|2Y5I|F Chain F, S100z From Zebrafish In Complex With Calcium
Length = 99
Score = 26.6 bits (57), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 13/50 (26%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Query: 42 SEFLQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLTPFYFVSNWRVKC 91
+E FL + ++++ +D N D +DF EF+ V+ V C
Sbjct: 40 AELTDFLMSQKDPMLVEKIMNDLDSNKDNEVDFNEFVV---LVAALTVAC 86
>pdb|1M8Q|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|T Chain T, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 145
Score = 26.2 bits (56), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 23/57 (40%)
Query: 25 KNFFNSMDTNGDGRISRSEFLQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLTPF 81
K F +D N DG I + + + E ++ + G ++F FLT F
Sbjct: 10 KEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEASGPINFTVFLTMF 66
>pdb|2X0S|A Chain A, 3.0 A Resolution Crystal Structure Of Glycosomal Pyruvate
Phosphate Dikinase From Trypanosoma Brucei
Length = 913
Score = 26.2 bits (56), Expect = 5.2, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 40 SRSEFLQFLGKFNNTQ-WIQELFQSIDQNGDGSL 72
SR + FL + N + Q+ FQSIDQ G G L
Sbjct: 803 SRDDAGPFLRHYGNLGIYAQDPFQSIDQEGIGEL 836
>pdb|2MYS|B Chain B, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
pdb|1I84|U Chain U, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C
Alphas Provided For Regulatory Light Chain. Only
Backbone Atoms Provided For S2 Fragment.
pdb|1I84|Z Chain Z, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C
Alphas Provided For Regulatory Light Chain. Only
Backbone Atoms Provided For S2 Fragment
Length = 166
Score = 26.2 bits (56), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 23/57 (40%)
Query: 25 KNFFNSMDTNGDGRISRSEFLQFLGKFNNTQWIQELFQSIDQNGDGSLDFVEFLTPF 81
K F +D N DG I + + + E ++ + G ++F FLT F
Sbjct: 28 KEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEASGPINFTVFLTMF 84
>pdb|3BFX|A Chain A, Crystal Structure Of Human Sulfotransferase Sult1c1 In
Complex With Pap
pdb|3BFX|B Chain B, Crystal Structure Of Human Sulfotransferase Sult1c1 In
Complex With Pap
Length = 296
Score = 25.8 bits (55), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 10/16 (62%), Positives = 12/16 (75%)
Query: 54 TQWIQELFQSIDQNGD 69
T WIQE+ I+QNGD
Sbjct: 52 TTWIQEIVDMIEQNGD 67
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.139 0.453
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,752,047
Number of Sequences: 62578
Number of extensions: 149693
Number of successful extensions: 1168
Number of sequences better than 100.0: 277
Number of HSP's better than 100.0 without gapping: 224
Number of HSP's successfully gapped in prelim test: 53
Number of HSP's that attempted gapping in prelim test: 471
Number of HSP's gapped (non-prelim): 684
length of query: 110
length of database: 14,973,337
effective HSP length: 74
effective length of query: 36
effective length of database: 10,342,565
effective search space: 372332340
effective search space used: 372332340
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 45 (21.9 bits)